-- dump date 20140619_082806 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type NP_414542.1 16127995 944742 190..255 1 NC_000913.3 thr operon leader peptide 255 thrL 944742 thrL Escherichia coli str. K-12 substr. MG1655 thr operon leader peptide NP_414542.1 190 D 511145 CDS NP_414543.1 16127996 945803 337..2799 1 NC_000913.3 bifunctional: aspartokinase I (N-terminal); homoserine dehydrogenase I (C-terminal); Bifunctional aspartokinase/homoserine dehydrogenase 1 2799 thrA 945803 thrA Escherichia coli str. K-12 substr. MG1655 Bifunctional aspartokinase/homoserine dehydrogenase 1 NP_414543.1 337 D 511145 CDS NP_414544.1 16127997 947498 2801..3733 1 NC_000913.3 homoserine kinase 3733 thrB 947498 thrB Escherichia coli str. K-12 substr. MG1655 homoserine kinase NP_414544.1 2801 D 511145 CDS NP_414545.1 16127998 945198 3734..5020 1 NC_000913.3 L-threonine synthase 5020 thrC 945198 thrC Escherichia coli str. K-12 substr. MG1655 L-threonine synthase NP_414545.1 3734 D 511145 CDS NP_414546.1 16127999 944747 5234..5530 1 NC_000913.3 DUF2502 family putative periplasmic protein 5530 yaaX 944747 yaaX Escherichia coli str. K-12 substr. MG1655 DUF2502 family putative periplasmic protein NP_414546.1 5234 D 511145 CDS NP_414547.1 16128000 944749 complement(5683..6459) 1 NC_000913.3 peroxide resistance protein, lowers intracellular iron 6459 yaaA 944749 yaaA Escherichia coli str. K-12 substr. MG1655 peroxide resistance protein, lowers intracellular iron NP_414547.1 5683 R 511145 CDS NP_414548.1 16128001 944745 complement(6529..7959) 1 NC_000913.3 inner membrane transport protein; putative transporter 7959 yaaJ 944745 yaaJ Escherichia coli str. K-12 substr. MG1655 putative transporter NP_414548.1 6529 R 511145 CDS NP_414549.1 16128002 944748 8238..9191 1 NC_000913.3 transaldolase B 9191 talB 944748 talB Escherichia coli str. K-12 substr. MG1655 transaldolase B NP_414549.1 8238 D 511145 CDS NP_414550.1 16128003 944760 9306..9893 1 NC_000913.3 putative molybdochetalase in molybdopterine biosynthesis; molybdochelatase incorporating molybdenum into molybdopterin 9893 mog 944760 mog Escherichia coli str. K-12 substr. MG1655 molybdochelatase incorporating molybdenum into molybdopterin NP_414550.1 9306 D 511145 CDS NP_414551.1 16128004 944792 complement(9928..10494) 1 NC_000913.3 succinate-acetate transporter 10494 satP 944792 satP Escherichia coli str. K-12 substr. MG1655 succinate-acetate transporter NP_414551.1 9928 R 511145 CDS NP_414552.1 16128005 944771 complement(10643..11356) 1 NC_000913.3 UPF0174 family protein 11356 yaaW 944771 yaaW Escherichia coli str. K-12 substr. MG1655 UPF0174 family protein NP_414552.1 10643 R 511145 CDS NP_414554.1 16128007 944751 complement(11382..11786) 1 NC_000913.3 UPF0412 family protein 11786 yaaI 944751 yaaI Escherichia coli str. K-12 substr. MG1655 UPF0412 family protein NP_414554.1 11382 R 511145 CDS NP_414555.1 16128008 944750 12163..14079 1 NC_000913.3 chaperone Hsp70; DNA biosynthesis; autoregulated heat shock proteins; chaperone Hsp70, with co-chaperone DnaJ 14079 dnaK 944750 dnaK Escherichia coli str. K-12 substr. MG1655 chaperone Hsp70, with co-chaperone DnaJ NP_414555.1 12163 D 511145 CDS NP_414556.1 16128009 944753 14168..15298 1 NC_000913.3 chaperone with DnaK; heat shock protein; chaperone Hsp40, DnaK co-chaperone 15298 dnaJ 944753 dnaJ Escherichia coli str. K-12 substr. MG1655 chaperone Hsp40, DnaK co-chaperone NP_414556.1 14168 D 511145 CDS NP_414557.1 16128010 944754 15445..16557 1 NC_000913.3 IS186 transposase 16557 insL1 944754 insL1 Escherichia coli str. K-12 substr. MG1655 IS186 transposase NP_414557.1 15445 D 511145 CDS NP_414559.1 16128012 944756 complement(16751..16960) 1 NC_000913.3 regulatory peptide whose translation enables hokC (gef) expression; completely contained in another CDS; regulatory protein for HokC, overlaps CDS of hokC 16960 mokC 944756 mokC Escherichia coli str. K-12 substr. MG1655 regulatory protein for HokC, overlaps CDS of hokC NP_414559.1 16751 R 511145 CDS YP_025292.1 49175991 2847744 complement(16751..16903) 1 NC_000913.3 small toxic membrane polypeptide; completely contained in another CDS; toxic membrane protein, small 16903 hokC 2847744 hokC Escherichia coli str. K-12 substr. MG1655 toxic membrane protein, small YP_025292.1 16751 R 511145 CDS NP_414560.1 16128013 944758 17489..18655 1 NC_000913.3 Na+/H antiporter, pH dependent; sodium-proton antiporter 18655 nhaA 944758 nhaA Escherichia coli str. K-12 substr. MG1655 sodium-proton antiporter NP_414560.1 17489 D 511145 CDS NP_414561.1 16128014 944757 18715..19620 1 NC_000913.3 transcriptional activator of nhaA 19620 nhaR 944757 nhaR Escherichia coli str. K-12 substr. MG1655 transcriptional activator of nhaA NP_414561.1 18715 D 511145 CDS NP_414562.1 16128015 944743 complement(19811..20314) 1 NC_000913.3 IS1 transposase B 20314 insB1 944743 insB1 Escherichia coli str. K-12 substr. MG1655 IS1 transposase B NP_414562.1 19811 R 511145 CDS NP_414563.1 16128016 948449 complement(20233..20508) 1 NC_000913.3 IS1 repressor TnpA 20508 insA 948449 insA Escherichia coli str. K-12 substr. MG1655 IS1 repressor TnpA NP_414563.1 20233 R 511145 CDS NP_414564.1 16128017 944759 complement(20815..21078) 1 NC_000913.3 30S ribosomal subunit protein S20 21078 rpsT 944759 rpsT Escherichia coli str. K-12 substr. MG1655 30S ribosomal subunit protein S20 NP_414564.1 20815 R 511145 CDS NP_414565.1 16128018 949128 21181..21399 1 NC_000913.3 uncharacterized protein 21399 yaaY 949128 yaaY Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_414565.1 21181 D 511145 CDS NP_414566.1 16128019 949129 21407..22348 1 NC_000913.3 bifunctional riboflavin kinase/FAD synthetase 22348 ribF 949129 ribF Escherichia coli str. K-12 substr. MG1655 bifunctional riboflavin kinase/FAD synthetase NP_414566.1 21407 D 511145 CDS NP_414567.1 16128020 944761 22391..25207 1 NC_000913.3 isoleucine tRNA synthetase; isoleucyl-tRNA synthetase 25207 ileS 944761 ileS Escherichia coli str. K-12 substr. MG1655 isoleucyl-tRNA synthetase NP_414567.1 22391 D 511145 CDS NP_414568.1 16128021 944800 25207..25701 1 NC_000913.3 prolipoprotein signal peptidase (SPase II); prolipoprotein signal peptidase (signal peptidase II) 25701 lspA 944800 lspA Escherichia coli str. K-12 substr. MG1655 prolipoprotein signal peptidase (signal peptidase II) NP_414568.1 25207 D 511145 CDS NP_414569.1 16128022 944807 25826..26275 1 NC_000913.3 FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) 26275 fkpB 944807 fkpB Escherichia coli str. K-12 substr. MG1655 FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) NP_414569.1 25826 D 511145 CDS NP_414570.1 16128023 944777 26277..27227 1 NC_000913.3 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, 4Fe-4S protein 27227 ispH 944777 ispH Escherichia coli str. K-12 substr. MG1655 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, 4Fe-4S protein NP_414570.1 26277 D 511145 CDS NP_414571.1 16128024 944796 27293..28207 1 NC_000913.3 ribonucleoside hydrolase 3 28207 rihC 944796 rihC Escherichia coli str. K-12 substr. MG1655 ribonucleoside hydrolase 3 NP_414571.1 27293 D 511145 CDS NP_414572.1 16128025 944762 28374..29195 1 NC_000913.3 dihydrodipicolinate reductase 29195 dapB 944762 dapB Escherichia coli str. K-12 substr. MG1655 dihydrodipicolinate reductase NP_414572.1 28374 D 511145 CDS NP_414573.1 16128026 949025 29651..30799 1 NC_000913.3 carbamoyl phosphate synthetase small subunit, glutamine amidotransferase 30799 carA 949025 carA Escherichia coli str. K-12 substr. MG1655 carbamoyl phosphate synthetase small subunit, glutamine amidotransferase NP_414573.1 29651 D 511145 CDS NP_414574.1 16128027 944775 30817..34038 1 NC_000913.3 carbamoyl-phosphate synthase large subunit 34038 carB 944775 carB Escherichia coli str. K-12 substr. MG1655 carbamoyl-phosphate synthase large subunit NP_414574.1 30817 D 511145 CDS NP_414576.4 90111079 944795 34300..34695 1 NC_000913.3 transcriptional regulator of cai operon; cai operon transcriptional activator 34695 caiF 944795 caiF Escherichia coli str. K-12 substr. MG1655 cai operon transcriptional activator NP_414576.4 34300 D 511145 CDS NP_414577.2 90111080 948999 complement(34781..35371) 1 NC_000913.3 possible synthesis of cofactor for carnitine racemase and dehydratase; stimulator of CaiD and CaiB enzyme activities 35371 caiE 948999 caiE Escherichia coli str. K-12 substr. MG1655 stimulator of CaiD and CaiB enzyme activities NP_414577.2 34781 R 511145 CDS NP_414578.2 221800779 948995 complement(35377..36162) 1 NC_000913.3 carnitine racemase; carnitinyl-CoA dehydratase 36162 caiD 948995 caiD Escherichia coli str. K-12 substr. MG1655 carnitinyl-CoA dehydratase NP_414578.2 35377 R 511145 CDS NP_414579.4 221800780 944886 complement(36271..37824) 1 NC_000913.3 probable crotonobetaine/carnitine-CoA ligase; putative crotonobetaine/carnitine-CoA ligase 37824 caiC 944886 caiC Escherichia coli str. K-12 substr. MG1655 putative crotonobetaine/carnitine-CoA ligase NP_414579.4 36271 R 511145 CDS NP_414580.1 16128032 948997 complement(37898..39115) 1 NC_000913.3 l-carnitine dehydratase; crotonobetainyl CoA:carnitine CoA transferase 39115 caiB 948997 caiB Escherichia coli str. K-12 substr. MG1655 crotonobetainyl CoA:carnitine CoA transferase NP_414580.1 37898 R 511145 CDS NP_414581.1 16128033 949064 complement(39244..40386) 1 NC_000913.3 probable carnitine operon oxidoreductase; crotonobetaine reductase subunit II, FAD-binding 40386 caiA 949064 caiA Escherichia coli str. K-12 substr. MG1655 crotonobetaine reductase subunit II, FAD-binding NP_414581.1 39244 R 511145 CDS NP_414582.1 16128034 944765 complement(40417..41931) 1 NC_000913.3 probable carnitine transporter; putative transporter 41931 caiT 944765 caiT Escherichia coli str. K-12 substr. MG1655 putative transporter NP_414582.1 40417 R 511145 CDS NP_414583.2 90111081 947316 42403..43173 1 NC_000913.3 probable flavoprotein subunit, carnitine metabolism; anaerobic carnitine reduction putative electron transfer flavoprotein subunit 43173 fixA 947316 fixA Escherichia coli str. K-12 substr. MG1655 anaerobic carnitine reduction putative electron transfer flavoprotein subunit NP_414583.2 42403 D 511145 CDS NP_414584.1 16128036 948939 43188..44129 1 NC_000913.3 probable flavoprotein subunit, carnitine metabolism; putative electron transfer flavoprotein, NAD/FAD-binding domain and ETFP adenine nucleotide-binding domain-like protein 44129 fixB 948939 fixB Escherichia coli str. K-12 substr. MG1655 putative electron transfer flavoprotein, NAD/FAD-binding domain and ETFP adenine nucleotide-binding domain-like protein NP_414584.1 43188 D 511145 CDS NP_414585.1 16128037 948958 44180..45466 1 NC_000913.3 flavoprotein; electron transport; putative oxidoreductase 45466 fixC 948958 fixC Escherichia coli str. K-12 substr. MG1655 putative oxidoreductase NP_414585.1 44180 D 511145 CDS NP_414586.1 16128038 948590 45463..45750 1 NC_000913.3 putative ferredoxin; putative 4Fe-4S ferredoxin-type protein 45750 fixX 948590 fixX Escherichia coli str. K-12 substr. MG1655 putative 4Fe-4S ferredoxin-type protein NP_414586.1 45463 D 511145 CDS NP_414587.1 16128039 944766 45807..47138 1 NC_000913.3 putative transport protein; putative transporter 47138 yaaU 944766 yaaU Escherichia coli str. K-12 substr. MG1655 putative transporter NP_414587.1 45807 D 511145 CDS NP_414588.1 16128040 944767 47246..47776 1 NC_000913.3 putative NAD(P)H oxidoreductase; potassium-efflux system ancillary protein for KefC, glutathione-regulated; quinone oxidoreductase, FMN-dependent 47776 kefF 944767 kefF Escherichia coli str. K-12 substr. MG1655 potassium-efflux system ancillary protein for KefC, glutathione-regulated; quinone oxidoreductase, FMN-dependent NP_414588.1 47246 D 511145 CDS NP_414589.1 16128041 944773 47769..49631 1 NC_000913.3 K+ efflux antiporter, glutathione-regulated; potassium:proton antiporter 49631 kefC 944773 kefC Escherichia coli str. K-12 substr. MG1655 potassium:proton antiporter NP_414589.1 47769 D 511145 CDS NP_414590.1 16128042 944790 49823..50302 1 NC_000913.3 dihydrofolate reductase type I; trimethoprim resistance; dihydrofolate reductase 50302 folA 944790 folA Escherichia coli str. K-12 substr. MG1655 dihydrofolate reductase NP_414590.1 49823 D 511145 CDS NP_414591.1 16128043 944770 complement(50380..51222) 1 NC_000913.3 diadenosine tetraphosphatase 51222 apaH 944770 apaH Escherichia coli str. K-12 substr. MG1655 diadenosine tetraphosphatase NP_414591.1 50380 R 511145 CDS NP_414592.1 16128044 944772 complement(51229..51606) 1 NC_000913.3 protein associated with Co2+ and Mg2+ efflux 51606 apaG 944772 apaG Escherichia coli str. K-12 substr. MG1655 protein associated with Co2+ and Mg2+ efflux NP_414592.1 51229 R 511145 CDS NP_414593.1 16128045 944939 complement(51609..52430) 1 NC_000913.3 16S rRNA m(6)A1518, m(6)A1519 dimethyltransferase, SAM-dependent 52430 rsmA 944939 rsmA Escherichia coli str. K-12 substr. MG1655 16S rRNA m(6)A1518, m(6)A1519 dimethyltransferase, SAM-dependent NP_414593.1 51609 R 511145 CDS NP_414594.1 16128046 944919 complement(52427..53416) 1 NC_000913.3 pyridoxine biosynthesis; 4-hydroxy-L-threonine phosphate dehydrogenase, NAD-dependent 53416 pdxA 944919 pdxA Escherichia coli str. K-12 substr. MG1655 4-hydroxy-L-threonine phosphate dehydrogenase, NAD-dependent NP_414594.1 52427 R 511145 CDS NP_414595.1 16128047 944812 complement(53416..54702) 1 NC_000913.3 survival protein; peptidyl-prolyl cis-trans isomerase (PPIase) 54702 surA 944812 surA Escherichia coli str. K-12 substr. MG1655 peptidyl-prolyl cis-trans isomerase (PPIase) NP_414595.1 53416 R 511145 CDS NP_414596.1 16128048 945011 complement(54755..57109) 1 NC_000913.3 organic solvent tolerance; LPS assembly OM complex LptDE, beta-barrel component 57109 lptD 945011 lptD Escherichia coli str. K-12 substr. MG1655 LPS assembly OM complex LptDE, beta-barrel component NP_414596.1 54755 R 511145 CDS NP_414597.1 16128049 948992 57364..58179 1 NC_000913.3 membrane-anchored DnaK co-chaperone, DNA-binding protein 58179 djlA 948992 djlA Escherichia coli str. K-12 substr. MG1655 membrane-anchored DnaK co-chaperone, DNA-binding protein NP_414597.1 57364 D 511145 CDS b4659 944776 join(58474..59052,59052..59279) 1 NC_000913.3 pseudogene, pentapeptide repeats-containing; <NULL_VALUE> 59279 yabP 944776 yabP Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 58474 D 511145 CDS NP_414600.1 16128052 946262 complement(59687..60346) 1 NC_000913.3 dual specificity 23S rRNA pseudouridine(746), tRNA pseudouridine(32) synthase, SAM-dependent 60346 rluA 946262 rluA Escherichia coli str. K-12 substr. MG1655 dual specificity 23S rRNA pseudouridine(746), tRNA pseudouridine(32) synthase, SAM-dependent NP_414600.1 59687 R 511145 CDS NP_414601.1 16128053 948523 complement(60358..63264) 1 NC_000913.3 probable ATP-dependent RNA helicase; RNA polymerase remodeling/recycling factor ATPase; RNA polymerase-associated, ATP-dependent RNA translocase 63264 rapA 948523 rapA Escherichia coli str. K-12 substr. MG1655 RNA polymerase remodeling/recycling factor ATPase; RNA polymerase-associated, ATP-dependent RNA translocase NP_414601.1 60358 R 511145 CDS NP_414602.1 16128054 944779 complement(63429..65780) 1 NC_000913.3 DNA polymerase II 65780 polB 944779 polB Escherichia coli str. K-12 substr. MG1655 DNA polymerase II NP_414602.1 63429 R 511145 CDS NP_414603.1 16128055 945294 complement(65855..66550) 1 NC_000913.3 L-ribulose-5-phosphate 4-epimerase 66550 araD 945294 araD Escherichia coli str. K-12 substr. MG1655 L-ribulose-5-phosphate 4-epimerase NP_414603.1 65855 R 511145 CDS NP_414604.1 16128056 947511 complement(66835..68337) 1 NC_000913.3 L-arabinose isomerase 68337 araA 947511 araA Escherichia coli str. K-12 substr. MG1655 L-arabinose isomerase NP_414604.1 66835 R 511145 CDS NP_414605.1 16128057 946017 complement(68348..70048) 1 NC_000913.3 L-ribulokinase 70048 araB 946017 araB Escherichia coli str. K-12 substr. MG1655 L-ribulokinase NP_414605.1 68348 R 511145 CDS NP_414606.1 16128058 944780 70387..71265 1 NC_000913.3 transcriptional regulator for ara operon; ara regulon transcriptional activator; autorepressor 71265 araC 944780 araC Escherichia coli str. K-12 substr. MG1655 ara regulon transcriptional activator; autorepressor NP_414606.1 70387 D 511145 CDS NP_414607.1 16128059 944783 71351..72115 1 NC_000913.3 DedA family inner membrane protein 72115 yabI 944783 yabI Escherichia coli str. K-12 substr. MG1655 DedA family inner membrane protein NP_414607.1 71351 D 511145 CDS NP_414608.1 16128060 944785 complement(72229..72927) 1 NC_000913.3 putative ATP-binding component of a transport system; thiamine, thiamine pyrophosphate ABC transporter ATPase; ThiBPQ thiamine, thiamine pyrophosphate importer 72927 thiQ 944785 thiQ Escherichia coli str. K-12 substr. MG1655 thiamine, thiamine pyrophosphate ABC transporter ATPase; ThiBPQ thiamine, thiamine pyrophosphate importer NP_414608.1 72229 R 511145 CDS NP_414609.1 16128061 944784 complement(72911..74521) 1 NC_000913.3 thiamine, thiamine pyrophosphate ABC transporter permease; ThiBPQ thiamine, thiamine pyrophosphate importer 74521 thiP 944784 thiP Escherichia coli str. K-12 substr. MG1655 thiamine, thiamine pyrophosphate ABC transporter permease; ThiBPQ thiamine, thiamine pyrophosphate importer NP_414609.1 72911 R 511145 CDS NP_414610.1 16128062 946306 complement(74497..75480) 1 NC_000913.3 thiamin-binding periplasmic protein; periplasmic-binding component of ABC superfamily; thiamine-, thiamine pyrophosphate-, thiamine monophosphate-binding ABC transporter periplasmic protein; ThiBPQ thiamine, thiamine pyrophosphate importer 75480 thiB 946306 thiB Escherichia coli str. K-12 substr. MG1655 thiamine-, thiamine pyrophosphate-, thiamine monophosphate-binding ABC transporter periplasmic protein; ThiBPQ thiamine, thiamine pyrophosphate importer NP_414610.1 74497 R 511145 CDS NP_414611.1 16128063 944788 complement(75644..77299) 1 NC_000913.3 putative transport protein; transcriptional DNA-binding transcriptional activator of sgrS sRNA 77299 sgrR 944788 sgrR Escherichia coli str. K-12 substr. MG1655 transcriptional DNA-binding transcriptional activator of sgrS sRNA NP_414611.1 75644 R 511145 CDS YP_002791237.1 226524697 7751624 77388..77519 1 NC_000913.3 inhibitor of glucose uptake 77519 sgrT 7751624 sgrT Escherichia coli str. K-12 substr. MG1655 inhibitor of glucose uptake YP_002791237.1 77388 D 511145 CDS YP_025293.1 49175994 944793 77621..78799 1 NC_000913.3 broad specificity sugar efflux system 78799 setA 944793 setA Escherichia coli str. K-12 substr. MG1655 broad specificity sugar efflux system YP_025293.1 77621 D 511145 CDS NP_414613.1 16128065 945642 complement(78848..79453) 1 NC_000913.3 isopropylmalate isomerase subunit; 3-isopropylmalate dehydratase small subunit 79453 leuD 945642 leuD Escherichia coli str. K-12 substr. MG1655 3-isopropylmalate dehydratase small subunit NP_414613.1 78848 R 511145 CDS NP_414614.1 16128066 945076 complement(79464..80864) 1 NC_000913.3 3-isopropylmalate isomerase (dehydratase) subunit; 3-isopropylmalate dehydratase large subunit 80864 leuC 945076 leuC Escherichia coli str. K-12 substr. MG1655 3-isopropylmalate dehydratase large subunit NP_414614.1 79464 R 511145 CDS NP_414615.4 90111082 944798 complement(80867..81958) 1 NC_000913.3 3-isopropylmalate dehydrogenase, NAD(+)-dependent 81958 leuB 944798 leuB Escherichia coli str. K-12 substr. MG1655 3-isopropylmalate dehydrogenase, NAD(+)-dependent NP_414615.4 80867 R 511145 CDS NP_414616.1 16128068 947465 complement(81958..83529) 1 NC_000913.3 2-isopropylmalate synthase 83529 leuA 947465 leuA Escherichia coli str. K-12 substr. MG1655 2-isopropylmalate synthase NP_414616.1 81958 R 511145 CDS NP_414617.1 16128069 946072 complement(83622..83708) 1 NC_000913.3 leu operon leader peptide 83708 leuL 946072 leuL Escherichia coli str. K-12 substr. MG1655 leu operon leader peptide NP_414617.1 83622 R 511145 CDS NP_414618.4 90111083 949034 84368..85312 1 NC_000913.3 probable transcriptional activator for leuABCD operon; global transcription factor 85312 leuO 949034 leuO Escherichia coli str. K-12 substr. MG1655 global transcription factor NP_414618.4 84368 D 511145 CDS YP_025294.2 90111084 948793 85630..87354 1 NC_000913.3 acetolactate synthase III, valine sensitive, large subunit; acetolactate synthase 3 large subunit 87354 ilvI 948793 ilvI Escherichia coli str. K-12 substr. MG1655 acetolactate synthase 3 large subunit YP_025294.2 85630 D 511145 CDS NP_414620.1 16128071 947267 87357..87848 1 NC_000913.3 acetolactate synthase III, valine sensitive, small subunit; acetolactate synthase 3, small subunit, valine-sensitive 87848 ilvH 947267 ilvH Escherichia coli str. K-12 substr. MG1655 acetolactate synthase 3, small subunit, valine-sensitive NP_414620.1 87357 D 511145 CDS NP_414622.1 16128073 944804 88028..89032 1 NC_000913.3 transcriptional repressor of fru operon and others; transcriptional repressor-activator for carbon metabolism 89032 cra 944804 cra Escherichia coli str. K-12 substr. MG1655 transcriptional repressor-activator for carbon metabolism NP_414622.1 88028 D 511145 CDS NP_414623.1 16128074 944810 89634..90092 1 NC_000913.3 RsmH methytransferase inhibitor 90092 mraZ 944810 mraZ Escherichia coli str. K-12 substr. MG1655 RsmH methytransferase inhibitor NP_414623.1 89634 D 511145 CDS NP_414624.1 16128075 944806 90094..91035 1 NC_000913.3 putative apolipoprotein; 16S rRNA m(4)C1402 methyltransferase, SAM-dependent 91035 rsmH 944806 rsmH Escherichia coli str. K-12 substr. MG1655 16S rRNA m(4)C1402 methyltransferase, SAM-dependent NP_414624.1 90094 D 511145 CDS NP_414625.1 16128076 944803 91032..91397 1 NC_000913.3 cell division protein; ingrowth of wall at septum; membrane bound cell division protein at septum containing leucine zipper motif 91397 ftsL 944803 ftsL Escherichia coli str. K-12 substr. MG1655 membrane bound cell division protein at septum containing leucine zipper motif NP_414625.1 91032 D 511145 CDS NP_414626.1 16128077 944799 91413..93179 1 NC_000913.3 septum formation; penicillin-binding protein 3; peptidoglycan synthetase; transpeptidase involved in septal peptidoglycan synthesis (penicillin-binding protein 3) 93179 ftsI 944799 ftsI Escherichia coli str. K-12 substr. MG1655 transpeptidase involved in septal peptidoglycan synthesis (penicillin-binding protein 3) NP_414626.1 91413 D 511145 CDS NP_414627.1 16128078 944791 93166..94653 1 NC_000913.3 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate:meso- diaminopimelate ligase 94653 murE 944791 murE Escherichia coli str. K-12 substr. MG1655 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate:meso- diaminopimelate ligase NP_414627.1 93166 D 511145 CDS NP_414628.1 16128079 944813 94650..96008 1 NC_000913.3 UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D- alanine ligase 96008 murF 944813 murF Escherichia coli str. K-12 substr. MG1655 UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D- alanine ligase NP_414628.1 94650 D 511145 CDS NP_414629.1 16128080 944814 96002..97084 1 NC_000913.3 phospho-N-acetylmuramoyl-pentapeptide transferase?; phospho-N-acetylmuramoyl-pentapeptide transferase 97084 mraY 944814 mraY Escherichia coli str. K-12 substr. MG1655 phospho-N-acetylmuramoyl-pentapeptide transferase NP_414629.1 96002 D 511145 CDS NP_414630.1 16128081 944818 97087..98403 1 NC_000913.3 UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase 98403 murD 944818 murD Escherichia coli str. K-12 substr. MG1655 UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase NP_414630.1 97087 D 511145 CDS NP_414631.1 16128082 946322 98403..99647 1 NC_000913.3 cell division; membrane protein involved in shape determination; lipid II flippase; integral membrane protein involved in stabilizing FstZ ring during cell division 99647 ftsW 946322 ftsW Escherichia coli str. K-12 substr. MG1655 lipid II flippase; integral membrane protein involved in stabilizing FstZ ring during cell division NP_414631.1 98403 D 511145 CDS NP_414632.1 16128083 946321 99644..100711 1 NC_000913.3 N-acetylglucosaminyl transferase 100711 murG 946321 murG Escherichia coli str. K-12 substr. MG1655 N-acetylglucosaminyl transferase NP_414632.1 99644 D 511145 CDS NP_414633.1 16128084 946153 100765..102240 1 NC_000913.3 UDP-N-acetylmuramate:L-alanine ligase 102240 murC 946153 murC Escherichia coli str. K-12 substr. MG1655 UDP-N-acetylmuramate:L-alanine ligase NP_414633.1 100765 D 511145 CDS NP_414634.1 16128085 946324 102233..103153 1 NC_000913.3 D-alanine-D-alanine ligase B, affects cell division; D-alanine:D-alanine ligase 103153 ddlB 946324 ddlB Escherichia coli str. K-12 substr. MG1655 D-alanine:D-alanine ligase NP_414634.1 102233 D 511145 CDS NP_414635.1 16128086 944823 103155..103985 1 NC_000913.3 cell division protein; ingrowth of wall at septum; divisome assembly protein, membrane anchored protein involved in growth of wall at septum 103985 ftsQ 944823 ftsQ Escherichia coli str. K-12 substr. MG1655 divisome assembly protein, membrane anchored protein involved in growth of wall at septum NP_414635.1 103155 D 511145 CDS NP_414636.1 16128087 944778 103982..105244 1 NC_000913.3 ATP-binding cell division protein, septation process, complexes with FtsZ, associated with junctions of inner and outer membranes; ATP-binding cell division protein involved in recruitment of FtsK to Z ring 105244 ftsA 944778 ftsA Escherichia coli str. K-12 substr. MG1655 ATP-binding cell division protein involved in recruitment of FtsK to Z ring NP_414636.1 103982 D 511145 CDS NP_414637.1 16128088 944786 105305..106456 1 NC_000913.3 cell division; forms circumferential ring; tubulin-like GTP-binding protein and GTPase; GTP-binding tubulin-like cell division protein 106456 ftsZ 944786 ftsZ Escherichia coli str. K-12 substr. MG1655 GTP-binding tubulin-like cell division protein NP_414637.1 105305 D 511145 CDS NP_414638.1 16128089 944816 106557..107474 1 NC_000913.3 UDP-3-O-acyl N-acetylglucosamine deacetylase; lipid A biosynthesis; UDP-3-O-acyl N-acetylglucosamine deacetylase 107474 lpxC 944816 lpxC Escherichia coli str. K-12 substr. MG1655 UDP-3-O-acyl N-acetylglucosamine deacetylase NP_414638.1 106557 D 511145 CDS NP_414639.2 90111085 944831 107705..108217 1 NC_000913.3 regulator of secA translation 108217 secM 944831 secM Escherichia coli str. K-12 substr. MG1655 regulator of secA translation NP_414639.2 107705 D 511145 CDS NP_414640.1 16128091 944821 108279..110984 1 NC_000913.3 preprotein translocase; secretion protein; preprotein translocase subunit, ATPase 110984 secA 944821 secA Escherichia coli str. K-12 substr. MG1655 preprotein translocase subunit, ATPase NP_414640.1 108279 D 511145 CDS NP_414641.1 16128092 944824 111044..111433 1 NC_000913.3 7,8-dihydro-8-oxoguanine-triphosphatase, prefers dGTP, causes AT-GC transversions; nucleoside triphosphate pyrophosphohydrolase, marked preference for dGTP 111433 mutT 944824 mutT Escherichia coli str. K-12 substr. MG1655 nucleoside triphosphate pyrophosphohydrolase, marked preference for dGTP NP_414641.1 111044 D 511145 CDS NP_414643.1 16128094 945630 complement(111649..111846) 1 NC_000913.3 DNA gyrase inhibitor 111846 yacG 945630 yacG Escherichia coli str. K-12 substr. MG1655 DNA gyrase inhibitor NP_414643.1 111649 R 511145 CDS NP_414644.1 16128095 944873 complement(111856..112599) 1 NC_000913.3 FtsZ stabilizer 112599 zapD 944873 zapD Escherichia coli str. K-12 substr. MG1655 FtsZ stabilizer NP_414644.1 111856 R 511145 CDS NP_414645.1 16128096 949060 complement(112599..113219) 1 NC_000913.3 putative DNA repair protein; dephospho-CoA kinase 113219 coaE 949060 coaE Escherichia coli str. K-12 substr. MG1655 dephospho-CoA kinase NP_414645.1 112599 R 511145 CDS NP_414646.1 16128097 948986 113444..114487 1 NC_000913.3 GMP reductase 114487 guaC 948986 guaC Escherichia coli str. K-12 substr. MG1655 GMP reductase NP_414646.1 113444 D 511145 CDS NP_414648.1 16128099 945806 complement(114522..115724) 1 NC_000913.3 putative integral membrane protein involved in biogenesis of fimbriae, protein transport, DNA uptake; assembly protein in type IV pilin biogenesis, transmembrane protein 115724 hofC 945806 hofC Escherichia coli str. K-12 substr. MG1655 assembly protein in type IV pilin biogenesis, transmembrane protein NP_414648.1 114522 R 511145 CDS NP_414649.1 16128100 947481 complement(115714..117099) 1 NC_000913.3 putative integral membrane protein involved in biogenesis of fimbriae, protein transport, DNA uptake; T2SE secretion family protein; P-loop ATPase superfamily protein 117099 hofB 947481 hofB Escherichia coli str. K-12 substr. MG1655 T2SE secretion family protein; P-loop ATPase superfamily protein NP_414649.1 115714 R 511145 CDS NP_414650.1 16128101 945817 complement(117109..117549) 1 NC_000913.3 prelipin peptidase dependent protein; putative prepilin peptidase-dependent pilin 117549 ppdD 945817 ppdD Escherichia coli str. K-12 substr. MG1655 putative prepilin peptidase-dependent pilin NP_414650.1 117109 R 511145 CDS NP_414651.1 16128102 948869 complement(117752..118645) 1 NC_000913.3 quinolinate phosphoribosyltransferase 118645 nadC 948869 nadC Escherichia coli str. K-12 substr. MG1655 quinolinate phosphoribosyltransferase NP_414651.1 117752 R 511145 CDS NP_414652.1 16128103 948877 118733..119284 1 NC_000913.3 regulates ampC; 1,6-anhydro-N-acetylmuramyl-L-alanine amidase, Zn-dependent; murein amidase 119284 ampD 948877 ampD Escherichia coli str. K-12 substr. MG1655 1,6-anhydro-N-acetylmuramyl-L-alanine amidase, Zn-dependent; murein amidase NP_414652.1 118733 D 511145 CDS NP_414653.1 16128104 946678 119281..120135 1 NC_000913.3 regulates ampC; ampicillin resistance inner membrane protein; putative signaling protein in beta-lactamase regulation 120135 ampE 946678 ampE Escherichia coli str. K-12 substr. MG1655 ampicillin resistance inner membrane protein; putative signaling protein in beta-lactamase regulation NP_414653.1 119281 D 511145 CDS NP_414654.1 16128105 946018 complement(120178..121551) 1 NC_000913.3 aromatic amino acid transport protein; aromatic amino acid transporter 121551 aroP 946018 aroP Escherichia coli str. K-12 substr. MG1655 aromatic amino acid transporter NP_414654.1 120178 R 511145 CDS NP_414655.1 16128106 944827 122092..122856 1 NC_000913.3 transcriptional regulator for pyruvate dehydrogenase complex; pyruvate dehydrogenase complex repressor; autorepressor 122856 pdhR 944827 pdhR Escherichia coli str. K-12 substr. MG1655 pyruvate dehydrogenase complex repressor; autorepressor NP_414655.1 122092 D 511145 CDS NP_414656.1 16128107 944834 123017..125680 1 NC_000913.3 pyruvate dehydrogenase (decarboxylase component); pyruvate dehydrogenase, decarboxylase component E1, thiamine triphosphate-binding 125680 aceE 944834 aceE Escherichia coli str. K-12 substr. MG1655 pyruvate dehydrogenase, decarboxylase component E1, thiamine triphosphate-binding NP_414656.1 123017 D 511145 CDS NP_414657.1 16128108 944794 125695..127587 1 NC_000913.3 pyruvate dehydrogenase (dihydrolipoyltransacetylase component); pyruvate dehydrogenase, dihydrolipoyltransacetylase component E2 127587 aceF 944794 aceF Escherichia coli str. K-12 substr. MG1655 pyruvate dehydrogenase, dihydrolipoyltransacetylase component E2 NP_414657.1 125695 D 511145 CDS NP_414658.1 16128109 944854 127912..129336 1 NC_000913.3 lipoamide dehydrogenase (NADH); component of 2-oxodehydrogenase and pyruvate complexes; L-protein of glycine cleavage complex; lipoamide dehydrogenase, E3 component is part of three enzyme complexes 129336 lpd 944854 lpd Escherichia coli str. K-12 substr. MG1655 lipoamide dehydrogenase, E3 component is part of three enzyme complexes NP_414658.1 127912 D 511145 CDS NP_414659.1 16128110 944868 complement(129407..131260) 1 NC_000913.3 putative membrane protein; uncharacterized protein 131260 yacH 944868 yacH Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_414659.1 129407 R 511145 CDS NP_414660.1 16128111 944864 131615..134212 1 NC_000913.3 aconitate hydrase B; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 134212 acnB 944864 acnB Escherichia coli str. K-12 substr. MG1655 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase NP_414660.1 131615 D 511145 CDS NP_414661.2 90111086 944809 134388..134750 1 NC_000913.3 UPF0231 family protein 134750 yacL 944809 yacL Escherichia coli str. K-12 substr. MG1655 UPF0231 family protein NP_414661.2 134388 D 511145 CDS NP_414662.1 16128113 947719 complement(134788..135582) 1 NC_000913.3 S-adenosylmethionine decarboxylase 135582 speD 947719 speD Escherichia coli str. K-12 substr. MG1655 S-adenosylmethionine decarboxylase NP_414662.1 134788 R 511145 CDS NP_414663.1 16128114 947726 complement(135598..136464) 1 NC_000913.3 spermidine synthase = putrescine aminopropyltransferase; spermidine synthase (putrescine aminopropyltransferase) 136464 speE 947726 speE Escherichia coli str. K-12 substr. MG1655 spermidine synthase (putrescine aminopropyltransferase) NP_414663.1 135598 R 511145 CDS NP_414664.4 90111087 948472 complement(136570..136917) 1 NC_000913.3 PulS_OutS family protein 136917 yacC 948472 yacC Escherichia coli str. K-12 substr. MG1655 PulS_OutS family protein NP_414664.4 136570 R 511145 CDS NP_414665.1 16128116 947736 137083..138633 1 NC_000913.3 multicopper oxidase (laccase) 138633 cueO 947736 cueO Escherichia coli str. K-12 substr. MG1655 multicopper oxidase (laccase) NP_414665.1 137083 D 511145 CDS NP_414666.1 16128117 944830 complement(138835..141225) 1 NC_000913.3 glucose dehydrogenase 141225 gcd 944830 gcd Escherichia coli str. K-12 substr. MG1655 glucose dehydrogenase NP_414666.1 138835 R 511145 CDS NP_414667.4 90111088 946624 141431..141967 1 NC_000913.3 hypoxanthine phosphoribosyltransferase 141967 hpt 946624 hpt Escherichia coli str. K-12 substr. MG1655 hypoxanthine phosphoribosyltransferase NP_414667.4 141431 D 511145 CDS NP_414668.1 16128119 944832 complement(142008..142670) 1 NC_000913.3 putative carbonic anhdrase; carbonic anhydrase 142670 can 944832 can Escherichia coli str. K-12 substr. MG1655 carbonic anhydrase NP_414668.1 142008 R 511145 CDS NP_414669.1 16128120 944833 142779..143705 1 NC_000913.3 putative ATP-binding component of a transport system; putative ABC superfamily transporter ATP-binding subunit 143705 yadG 944833 yadG Escherichia coli str. K-12 substr. MG1655 putative ABC superfamily transporter ATP-binding subunit NP_414669.1 142779 D 511145 CDS NP_414670.1 16128121 944836 143702..144472 1 NC_000913.3 inner membrane putative ABC superfamily transporter permease 144472 yadH 944836 yadH Escherichia coli str. K-12 substr. MG1655 inner membrane putative ABC superfamily transporter permease NP_414670.1 143702 D 511145 CDS NP_414671.1 16128122 947397 144577..145017 1 NC_000913.3 putative PTS enzyme II B component; putative PTS Enzyme IIA 145017 yadI 947397 yadI Escherichia coli str. K-12 substr. MG1655 putative PTS Enzyme IIA NP_414671.1 144577 D 511145 CDS NP_414672.1 16128123 946536 145081..146310 1 NC_000913.3 conserved hypothetical protein; putative polysaccharide deacetylase lipoprotein 146310 yadE 946536 yadE Escherichia coli str. K-12 substr. MG1655 putative polysaccharide deacetylase lipoprotein NP_414672.1 145081 D 511145 CDS NP_414673.1 16128124 945686 complement(146314..146694) 1 NC_000913.3 aspartate 1-decarboxylase 146694 panD 945686 panD Escherichia coli str. K-12 substr. MG1655 aspartate 1-decarboxylase NP_414673.1 146314 R 511145 CDS NP_414674.1 16128125 944781 146968..147870 1 NC_000913.3 transposase_31 family protein 147870 yadD 944781 yadD Escherichia coli str. K-12 substr. MG1655 transposase_31 family protein NP_414674.1 146968 D 511145 CDS NP_414675.1 16128126 944958 complement(147944..148795) 1 NC_000913.3 pantothenate synthetase 148795 panC 944958 panC Escherichia coli str. K-12 substr. MG1655 pantothenate synthetase NP_414675.1 147944 R 511145 CDS NP_414676.1 16128127 944839 complement(148807..149601) 1 NC_000913.3 3-methyl-2-oxobutanoate hydroxymethyltransferase 149601 panB 944839 panB Escherichia coli str. K-12 substr. MG1655 3-methyl-2-oxobutanoate hydroxymethyltransferase NP_414676.1 148807 R 511145 CDS NP_414677.1 16128128 944837 complement(149715..150953) 1 NC_000913.3 putative fimbrial-like protein; putative fimbrial-like adhesin protein 150953 yadC 944837 yadC Escherichia coli str. K-12 substr. MG1655 putative fimbrial-like adhesin protein NP_414677.1 149715 R 511145 CDS NP_414678.1 16128129 944835 complement(151003..151599) 1 NC_000913.3 putative fimbrial protein; putative fimbrial-like adhesin protein 151599 yadK 944835 yadK Escherichia coli str. K-12 substr. MG1655 putative fimbrial-like adhesin protein NP_414678.1 151003 R 511145 CDS NP_414679.1 16128130 944829 complement(151626..152231) 1 NC_000913.3 putative fimbrial protein; putative fimbrial-like adhesin protein 152231 yadL 944829 yadL Escherichia coli str. K-12 substr. MG1655 putative fimbrial-like adhesin protein NP_414679.1 151626 R 511145 CDS NP_414680.4 90111089 944828 complement(152243..152812) 1 NC_000913.3 putative fimbrial-like protein; putative fimbrial-like adhesin protein 152812 yadM 944828 yadM Escherichia coli str. K-12 substr. MG1655 putative fimbrial-like adhesin protein NP_414680.4 152243 R 511145 CDS NP_414681.1 16128132 944819 complement(152829..155426) 1 NC_000913.3 probable outer membrane porin protein involved in fimbrial assembly; putative outer membrane usher protein 155426 htrE 944819 htrE Escherichia coli str. K-12 substr. MG1655 putative outer membrane usher protein NP_414681.1 152829 R 511145 CDS NP_414682.1 16128133 944859 complement(155461..156201) 1 NC_000913.3 probable pilin chaperone similar to PapD; putative periplasmic pilin chaperone 156201 yadV 944859 yadV Escherichia coli str. K-12 substr. MG1655 putative periplasmic pilin chaperone NP_414682.1 155461 R 511145 CDS NP_414683.1 16128134 944841 complement(156299..156883) 1 NC_000913.3 putative fimbrial-like protein; putative fimbrial-like adhesin protein 156883 yadN 944841 yadN Escherichia coli str. K-12 substr. MG1655 putative fimbrial-like adhesin protein NP_414683.1 156299 R 511145 CDS NP_414684.1 16128135 948792 complement(157253..157732) 1 NC_000913.3 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase; 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase 157732 folK 948792 folK Escherichia coli str. K-12 substr. MG1655 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase NP_414684.1 157253 R 511145 CDS NP_414685.4 162135892 947318 complement(157729..159126) 1 NC_000913.3 poly(A) polymerase 159126 pcnB 947318 pcnB Escherichia coli str. K-12 substr. MG1655 poly(A) polymerase NP_414685.4 157729 R 511145 CDS NP_414686.3 226524698 944846 complement(159186..160112) 1 NC_000913.3 putative tRNA synthetase; glutamyl-Q tRNA(Asp) synthetase 160112 gluQ 944846 gluQ Escherichia coli str. K-12 substr. MG1655 glutamyl-Q tRNA(Asp) synthetase NP_414686.3 159186 R 511145 CDS NP_414687.1 16128138 944850 complement(160149..160604) 1 NC_000913.3 dnaK suppressor protein; transcriptional regulator of rRNA transcription, DnaK suppressor protein 160604 dksA 944850 dksA Escherichia coli str. K-12 substr. MG1655 transcriptional regulator of rRNA transcription, DnaK suppressor protein NP_414687.1 160149 R 511145 CDS NP_414688.1 16128139 944855 complement(160782..161486) 1 NC_000913.3 probable regulator for maltose metabolism; sugar fermentation stimulation protein A 161486 sfsA 944855 sfsA Escherichia coli str. K-12 substr. MG1655 sugar fermentation stimulation protein A NP_414688.1 160782 R 511145 CDS NP_414689.4 90111091 944848 complement(161501..162031) 1 NC_000913.3 2'-5' RNA ligase 162031 ligT 944848 ligT Escherichia coli str. K-12 substr. MG1655 2'-5' RNA ligase NP_414689.4 161501 R 511145 CDS NP_414690.4 162135893 944845 162105..164534 1 NC_000913.3 helicase, ATP-dependent; putative ATP-dependent helicase 164534 hrpB 944845 hrpB Escherichia coli str. K-12 substr. MG1655 putative ATP-dependent helicase NP_414690.4 162105 D 511145 CDS NP_414691.1 16128142 944843 164730..167264 1 NC_000913.3 peptidoglycan synthetase; penicillin-binding protein 1B; fused glycosyl transferase and transpeptidase 167264 mrcB 944843 mrcB Escherichia coli str. K-12 substr. MG1655 fused glycosyl transferase and transpeptidase NP_414691.1 164730 D 511145 CDS NP_414692.1 16128143 944856 167484..169727 1 NC_000913.3 outer membrane protein receptor for ferrichrome, colicin M, and phages T1, T5, and phi80; ferrichrome outer membrane transporter 169727 fhuA 944856 fhuA Escherichia coli str. K-12 substr. MG1655 ferrichrome outer membrane transporter NP_414692.1 167484 D 511145 CDS NP_414693.1 16128144 945250 169778..170575 1 NC_000913.3 ATP-binding component of hydroxymate-dependent iron transport; iron-hydroxamate transporter subunit 170575 fhuC 945250 fhuC Escherichia coli str. K-12 substr. MG1655 iron-hydroxamate transporter subunit NP_414693.1 169778 D 511145 CDS NP_414694.1 16128145 947510 170575..171465 1 NC_000913.3 hydroxamate-dependent iron uptake, cytoplasmic membrane component; periplasmic-binding component of ABC superfamily; iron-hydroxamate transporter subunit 171465 fhuD 947510 fhuD Escherichia coli str. K-12 substr. MG1655 iron-hydroxamate transporter subunit NP_414694.1 170575 D 511145 CDS NP_414695.1 16128146 946890 171462..173444 1 NC_000913.3 fused iron-hydroxamate transporter subunits of ABC superfamily: membrane components 173444 fhuB 946890 fhuB Escherichia coli str. K-12 substr. MG1655 fused iron-hydroxamate transporter subunits of ABC superfamily: membrane components NP_414695.1 171462 D 511145 CDS NP_414696.1 16128147 946892 complement(173602..174882) 1 NC_000913.3 glutamate-1-semialdehyde aminotransferase (aminomutase) 174882 hemL 946892 hemL Escherichia coli str. K-12 substr. MG1655 glutamate-1-semialdehyde aminotransferase (aminomutase) NP_414696.1 173602 R 511145 CDS NP_414697.1 16128148 946715 175107..176528 1 NC_000913.3 putative channel transporter; H(+)/Cl(-) exchange transporter 176528 clcA 946715 clcA Escherichia coli str. K-12 substr. MG1655 H(+)/Cl(-) exchange transporter NP_414697.1 175107 D 511145 CDS NP_414698.1 16128149 944857 176610..176954 1 NC_000913.3 iron-sulfur cluster insertion protein 176954 erpA 944857 erpA Escherichia coli str. K-12 substr. MG1655 iron-sulfur cluster insertion protein NP_414698.1 176610 D 511145 CDS NP_414699.1 16128150 949062 complement(177001..177624) 1 NC_000913.3 UPF0126 family inner membrane protein 177624 yadS 949062 yadS Escherichia coli str. K-12 substr. MG1655 UPF0126 family inner membrane protein NP_414699.1 177001 R 511145 CDS NP_414700.1 16128151 947574 complement(177662..178462) 1 NC_000913.3 vitamin B12 transporter subunit: periplasmic-binding component of ABC superfamily 178462 btuF 947574 btuF Escherichia coli str. K-12 substr. MG1655 vitamin B12 transporter subunit: periplasmic-binding component of ABC superfamily NP_414700.1 177662 R 511145 CDS NP_414701.1 16128152 948542 complement(178455..179153) 1 NC_000913.3 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 179153 mtn 948542 mtn Escherichia coli str. K-12 substr. MG1655 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase NP_414701.1 178455 R 511145 CDS NP_414702.1 16128153 947177 179237..180754 1 NC_000913.3 deoxyguanosine triphosphate triphosphohydrolase 180754 dgt 947177 dgt Escherichia coli str. K-12 substr. MG1655 deoxyguanosine triphosphate triphosphohydrolase NP_414702.1 179237 D 511145 CDS NP_414703.1 16128154 947139 180884..182308 1 NC_000913.3 periplasmic serine protease Do; heat shock protein HtrA; serine endoprotease (protease Do), membrane-associated 182308 degP 947139 degP Escherichia coli str. K-12 substr. MG1655 serine endoprotease (protease Do), membrane-associated NP_414703.1 180884 D 511145 CDS NP_414704.4 90111093 944860 182463..183620 1 NC_000913.3 carbohydrate diacid regulon transcriptional regulator; autoregulator 183620 cdaR 944860 cdaR Escherichia coli str. K-12 substr. MG1655 carbohydrate diacid regulon transcriptional regulator; autoregulator NP_414704.4 182463 D 511145 CDS NP_414705.1 16128156 947044 complement(183709..184095) 1 NC_000913.3 putative structural protein; UPF0325 family protein 184095 yaeH 947044 yaeH Escherichia coli str. K-12 substr. MG1655 UPF0325 family protein NP_414705.1 183709 R 511145 CDS NP_414706.2 90111094 945002 complement(184257..185069) 1 NC_000913.3 phosphodiesterase with model substrate bis-pNPP 185069 yaeI 945002 yaeI Escherichia coli str. K-12 substr. MG1655 phosphodiesterase with model substrate bis-pNPP NP_414706.2 184257 R 511145 CDS NP_414708.1 16128159 944862 complement(185123..185947) 1 NC_000913.3 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase 185947 dapD 944862 dapD Escherichia coli str. K-12 substr. MG1655 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase NP_414708.1 185123 R 511145 CDS NP_414709.1 16128160 944863 complement(185978..188650) 1 NC_000913.3 protein PII; uridylyltransferase acts on regulator of glnA; uridylyltransferase 188650 glnD 944863 glnD Escherichia coli str. K-12 substr. MG1655 uridylyltransferase NP_414709.1 185978 R 511145 CDS NP_414710.1 16128161 947882 complement(188712..189506) 1 NC_000913.3 methionine aminopeptidase 189506 map 947882 map Escherichia coli str. K-12 substr. MG1655 methionine aminopeptidase NP_414710.1 188712 R 511145 CDS NP_414711.1 16128162 947874 189874..190599 1 NC_000913.3 30S ribosomal subunit protein S2 190599 rpsB 947874 rpsB Escherichia coli str. K-12 substr. MG1655 30S ribosomal subunit protein S2 NP_414711.1 189874 D 511145 CDS NP_414712.1 16128163 944866 190857..191708 1 NC_000913.3 translation elongation factor EF-Ts 191708 tsf 944866 tsf Escherichia coli str. K-12 substr. MG1655 translation elongation factor EF-Ts NP_414712.1 190857 D 511145 CDS NP_414713.1 16128164 944989 191855..192580 1 NC_000913.3 uridylate kinase 192580 pyrH 944989 pyrH Escherichia coli str. K-12 substr. MG1655 uridylate kinase NP_414713.1 191855 D 511145 CDS NP_414714.1 16128165 946122 192872..193429 1 NC_000913.3 ribosome releasing factor; ribosome recycling factor 193429 frr 946122 frr Escherichia coli str. K-12 substr. MG1655 ribosome recycling factor NP_414714.1 192872 D 511145 CDS NP_414715.1 16128166 945019 193521..194717 1 NC_000913.3 1-deoxy-D-xylulose 5-phosphate reductoisomerase 194717 dxr 945019 dxr Escherichia coli str. K-12 substr. MG1655 1-deoxy-D-xylulose 5-phosphate reductoisomerase NP_414715.1 193521 D 511145 CDS NP_414716.1 16128167 944874 194903..195664 1 NC_000913.3 undecaprenyl pyrophosphate synthetase (di-trans,poly-cis-decaprenylcistransferase); undecaprenyl pyrophosphate synthase 195664 ispU 944874 ispU Escherichia coli str. K-12 substr. MG1655 undecaprenyl pyrophosphate synthase NP_414716.1 194903 D 511145 CDS NP_414717.2 90111095 944876 195677..196534 1 NC_000913.3 CDP-diglyceride synthetase; CDP-diglyceride synthase 196534 cdsA 944876 cdsA Escherichia coli str. K-12 substr. MG1655 CDP-diglyceride synthase NP_414717.2 195677 D 511145 CDS NP_414718.1 16128169 944871 196546..197898 1 NC_000913.3 inner membrane zinc RIP metalloprotease; RpoE activator, by degrading RseA; cleaved signal peptide endoprotease 197898 rseP 944871 rseP Escherichia coli str. K-12 substr. MG1655 inner membrane zinc RIP metalloprotease; RpoE activator, by degrading RseA; cleaved signal peptide endoprotease NP_414718.1 196546 D 511145 CDS NP_414719.1 16128170 944870 197928..200360 1 NC_000913.3 putative outer membrane antigen; BamABCDE complex OM biogenesis outer membrane pore-forming assembly factor 200360 bamA 944870 bamA Escherichia coli str. K-12 substr. MG1655 BamABCDE complex OM biogenesis outer membrane pore-forming assembly factor NP_414719.1 197928 D 511145 CDS NP_414720.1 16128171 944861 200482..200967 1 NC_000913.3 periplasmic molecular chaperone for outer membrane proteins; periplasmic chaperone 200967 skp 944861 skp Escherichia coli str. K-12 substr. MG1655 periplasmic chaperone NP_414720.1 200482 D 511145 CDS NP_414721.1 16128172 944882 200971..201996 1 NC_000913.3 UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase 201996 lpxD 944882 lpxD Escherichia coli str. K-12 substr. MG1655 UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase NP_414721.1 200971 D 511145 CDS NP_414722.1 16128173 944888 202101..202556 1 NC_000913.3 (3R)-hydroxymyristol acyl carrier protein dehydratase 202556 fabZ 944888 fabZ Escherichia coli str. K-12 substr. MG1655 (3R)-hydroxymyristol acyl carrier protein dehydratase NP_414722.1 202101 D 511145 CDS NP_414723.1 16128174 944849 202560..203348 1 NC_000913.3 UDP-N-acetylglucosamine acetyltransferase; lipid A biosynthesis; UDP-N-acetylglucosamine acetyltransferase 203348 lpxA 944849 lpxA Escherichia coli str. K-12 substr. MG1655 UDP-N-acetylglucosamine acetyltransferase NP_414723.1 202560 D 511145 CDS NP_414724.1 16128175 944838 203348..204496 1 NC_000913.3 tetraacyldisaccharide-1-P; lipid A biosynthesis, penultimate step; tetraacyldisaccharide-1-P synthase 204496 lpxB 944838 lpxB Escherichia coli str. K-12 substr. MG1655 tetraacyldisaccharide-1-P synthase NP_414724.1 203348 D 511145 CDS NP_414725.1 16128176 944852 204493..205089 1 NC_000913.3 RNAse HII, degrades RNA of DNA-RNA hybrids; ribonuclease HII, degrades RNA of DNA-RNA hybrids 205089 rnhB 944852 rnhB Escherichia coli str. K-12 substr. MG1655 ribonuclease HII, degrades RNA of DNA-RNA hybrids NP_414725.1 204493 D 511145 CDS NP_414726.1 16128177 944877 205126..208608 1 NC_000913.3 DNA polymerase III, alpha subunit; DNA polymerase III alpha subunit 208608 dnaE 944877 dnaE Escherichia coli str. K-12 substr. MG1655 DNA polymerase III alpha subunit NP_414726.1 205126 D 511145 CDS NP_414727.1 16128178 944895 208621..209580 1 NC_000913.3 acetylCoA carboxylase, carboxytransferase component, alpha subunit; acetyl-CoA carboxylase, carboxytransferase, alpha subunit 209580 accA 944895 accA Escherichia coli str. K-12 substr. MG1655 acetyl-CoA carboxylase, carboxytransferase, alpha subunit NP_414727.1 208621 D 511145 CDS NP_414728.1 16128179 944887 209679..211820 1 NC_000913.3 lysine decarboxylase 2, constitutive 211820 ldcC 944887 ldcC Escherichia coli str. K-12 substr. MG1655 lysine decarboxylase 2, constitutive NP_414728.1 209679 D 511145 CDS NP_414729.4 90111096 944875 211877..212266 1 NC_000913.3 putative lyase 212266 yaeR 944875 yaeR Escherichia coli str. K-12 substr. MG1655 putative lyase NP_414729.4 211877 D 511145 CDS NP_414730.1 16128181 944889 212331..213629 1 NC_000913.3 tRNA(Ile)-lysidine synthetase 213629 tilS 944889 tilS Escherichia coli str. K-12 substr. MG1655 tRNA(Ile)-lysidine synthetase NP_414730.1 212331 D 511145 CDS NP_414731.2 90111097 944891 complement(213678..213932) 1 NC_000913.3 modulator of Rho-dependent transcription termination 213932 rof 944891 rof Escherichia coli str. K-12 substr. MG1655 modulator of Rho-dependent transcription termination NP_414731.2 213678 R 511145 CDS YP_026160.1 49176004 1450233 complement(213925..214125) 1 NC_000913.3 conserved hypothetical protein; UPF0253 family protein 214125 yaeP 1450233 yaeP Escherichia coli str. K-12 substr. MG1655 UPF0253 family protein YP_026160.1 213925 R 511145 CDS NP_414732.1 16128183 946809 214291..214836 1 NC_000913.3 PDDEXK superfamily protein 214836 yaeQ 946809 yaeQ Escherichia coli str. K-12 substr. MG1655 PDDEXK superfamily protein NP_414732.1 214291 D 511145 CDS NP_414733.1 16128184 946046 214833..215255 1 NC_000913.3 alternative stalled-ribosome rescue factor B; peptidyl-tRNA hydrolase, ribosome-attached 215255 arfB 946046 arfB Escherichia coli str. K-12 substr. MG1655 alternative stalled-ribosome rescue factor B; peptidyl-tRNA hydrolase, ribosome-attached NP_414733.1 214833 D 511145 CDS NP_414734.1 16128185 946782 215269..215979 1 NC_000913.3 copper homeostasis protein (lipoprotein); lipoprotein involved with copper homeostasis and adhesion 215979 nlpE 946782 nlpE Escherichia coli str. K-12 substr. MG1655 lipoprotein involved with copper homeostasis and adhesion NP_414734.1 215269 D 511145 CDS NP_414735.4 90111098 944892 complement(216179..217003) 1 NC_000913.3 putative lipoprotein 217003 yaeF 944892 yaeF Escherichia coli str. K-12 substr. MG1655 putative lipoprotein NP_414735.4 216179 R 511145 CDS NP_414736.1 16128187 949116 complement(217057..218775) 1 NC_000913.3 proline tRNA synthetase; prolyl-tRNA synthetase 218775 proS 949116 proS Escherichia coli str. K-12 substr. MG1655 prolyl-tRNA synthetase NP_414736.1 217057 R 511145 CDS NP_414737.1 16128188 949112 complement(218887..219594) 1 NC_000913.3 tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase, SAM-dependent 219594 tsaA 949112 tsaA Escherichia coli str. K-12 substr. MG1655 tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase, SAM-dependent NP_414737.1 218887 R 511145 CDS NP_414738.1 16128189 949113 complement(219591..219995) 1 NC_000913.3 regulator in colanic acid synthesis; interacts with RcsB; putative outer membrane protein 219995 rcsF 949113 rcsF Escherichia coli str. K-12 substr. MG1655 putative outer membrane protein NP_414738.1 219591 R 511145 CDS NP_414739.1 16128190 944893 complement(220113..220928) 1 NC_000913.3 D-methionine transport protein (ABC superfamily, peri_bind); DL-methionine transporter subunit 220928 metQ 944893 metQ Escherichia coli str. K-12 substr. MG1655 DL-methionine transporter subunit NP_414739.1 220113 R 511145 CDS NP_414740.1 16128191 944894 complement(220968..221621) 1 NC_000913.3 D- and L-methionine transport protein (ABC superfamily, membrane); DL-methionine transporter subunit 221621 metI 944894 metI Escherichia coli str. K-12 substr. MG1655 DL-methionine transporter subunit NP_414740.1 220968 R 511145 CDS NP_414741.1 16128192 944896 complement(221614..222645) 1 NC_000913.3 D- and L-methionine transport protein (ABC superfamily, atp_bind); DL-methionine transporter subunit 222645 metN 944896 metN Escherichia coli str. K-12 substr. MG1655 DL-methionine transporter subunit NP_414741.1 221614 R 511145 CDS NP_414742.1 16128193 944879 222833..223408 1 NC_000913.3 D,D-heptose 1,7-bisphosphate phosphatase 223408 gmhB 944879 gmhB Escherichia coli str. K-12 substr. MG1655 D,D-heptose 1,7-bisphosphate phosphatase NP_414742.1 222833 D 511145 CDS NP_414743.1 16128194 944901 229167..229970 1 NC_000913.3 2,5-diketo-D-gluconate reductase B 229970 dkgB 944901 dkgB Escherichia coli str. K-12 substr. MG1655 2,5-diketo-D-gluconate reductase B NP_414743.1 229167 D 511145 CDS NP_414744.1 16128195 947507 complement(229967..230881) 1 NC_000913.3 putative transcriptional regulator LYSR-type; LysR family putative transcriptional regulator 230881 yafC 947507 yafC Escherichia coli str. K-12 substr. MG1655 LysR family putative transcriptional regulator NP_414744.1 229967 R 511145 CDS NP_414745.1 16128196 946286 231122..231922 1 NC_000913.3 endo/exonuclease/phosphatase family protein 231922 yafD 946286 yafD Escherichia coli str. K-12 substr. MG1655 endo/exonuclease/phosphatase family protein NP_414745.1 231122 D 511145 CDS NP_414746.1 16128197 946197 231926..232549 1 NC_000913.3 putative biotin synthesis protein; putative S-adenosyl-L-methionine-dependent methyltransferase 232549 yafE 946197 yafE Escherichia coli str. K-12 substr. MG1655 putative S-adenosyl-L-methionine-dependent methyltransferase NP_414746.1 231926 D 511145 CDS NP_414747.1 16128198 945694 complement(232597..233955) 1 NC_000913.3 putative membrane-bound lytic murein transglycosylase D 233955 mltD 945694 mltD Escherichia coli str. K-12 substr. MG1655 putative membrane-bound lytic murein transglycosylase D NP_414747.1 232597 R 511145 CDS NP_414748.1 16128199 944902 complement(234027..234782) 1 NC_000913.3 probable hydroxyacylglutathione hydrolase; hydroxyacylglutathione hydrolase 234782 gloB 944902 gloB Escherichia coli str. K-12 substr. MG1655 hydroxyacylglutathione hydrolase NP_414748.1 234027 R 511145 CDS NP_414749.2 90111099 944903 234816..235538 1 NC_000913.3 putative S-adenosyl-L-methionine-dependent methyltransferase 235538 yafS 944903 yafS Escherichia coli str. K-12 substr. MG1655 putative S-adenosyl-L-methionine-dependent methyltransferase NP_414749.2 234816 D 511145 CDS NP_414750.1 16128201 946955 complement(235535..236002) 1 NC_000913.3 RNase HI, degrades RNA of DNA-RNA hybrids, participates in DNA replication; ribonuclease HI, degrades RNA of DNA-RNA hybrids 236002 rnhA 946955 rnhA Escherichia coli str. K-12 substr. MG1655 ribonuclease HI, degrades RNA of DNA-RNA hybrids NP_414750.1 235535 R 511145 CDS NP_414751.1 16128202 946441 236067..236798 1 NC_000913.3 DNA polymerase III, epsilon subunit; DNA polymerase III epsilon subunit 236798 dnaQ 946441 dnaQ Escherichia coli str. K-12 substr. MG1655 DNA polymerase III epsilon subunit NP_414751.1 236067 D 511145 CDS NP_414752.1 16128203 949009 237335..238120 1 NC_000913.3 putative aminopeptidase; lipoprotein 238120 yafT 949009 yafT Escherichia coli str. K-12 substr. MG1655 lipoprotein NP_414752.1 237335 D 511145 CDS YP_001165307.1 145698220 5061498 complement(238257..238736) 1 NC_000913.3 lethality reduction protein, putative inner membrane protein 238736 ykfM 5061498 ykfM Escherichia coli str. K-12 substr. MG1655 lethality reduction protein, putative inner membrane protein YP_001165307.1 238257 R 511145 CDS b0218 946644 complement(238746..239102) 1 NC_000913.3 pseudogene; <NULL_VALUE> 239102 yafU 946644 yafU Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 238746 R 511145 CDS b4503 1450235 239106..239378 1 NC_000913.3 pseudogene, H repeat-associated protein; <NULL_VALUE> 239378 yafF 1450235 yafF Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 239106 D 511145 CDS NP_414754.1 16128205 946585 complement(239419..240189) 1 NC_000913.3 putative EC 3.5. amidase-type enzyme; putative NAD(P)-binding C-N hydrolase family amidase 240189 yafV 946585 yafV Escherichia coli str. K-12 substr. MG1655 putative NAD(P)-binding C-N hydrolase family amidase NP_414754.1 239419 R 511145 CDS NP_414755.1 16128206 946530 240343..240816 1 NC_000913.3 inhibitor of vertebrate C-type lysozyme, periplasmic; inhibitor of c-type lysozyme, periplasmic 240816 ivy 946530 ivy Escherichia coli str. K-12 substr. MG1655 inhibitor of c-type lysozyme, periplasmic NP_414755.1 240343 D 511145 CDS NP_414756.2 90111100 949007 complement(240859..243303) 1 NC_000913.3 acyl coenzyme A dehydrogenase 243303 fadE 949007 fadE Escherichia coli str. K-12 substr. MG1655 acyl coenzyme A dehydrogenase NP_414756.2 240859 R 511145 CDS NP_414757.1 16128208 949134 243543..244121 1 NC_000913.3 phosphoheptose isomerase; D-sedoheptulose 7-phosphate isomerase 244121 gmhA 949134 gmhA Escherichia coli str. K-12 substr. MG1655 D-sedoheptulose 7-phosphate isomerase NP_414757.1 243543 D 511145 CDS NP_414758.1 16128209 944906 244327..245094 1 NC_000913.3 putative amidotransferase; putative amidotransfease 245094 yafJ 944906 yafJ Escherichia coli str. K-12 substr. MG1655 putative amidotransfease NP_414758.1 244327 D 511145 CDS NP_414759.1 16128210 944910 complement(245065..245805) 1 NC_000913.3 L,D-transpeptidase-related protein 245805 yafK 944910 yafK Escherichia coli str. K-12 substr. MG1655 L,D-transpeptidase-related protein NP_414759.1 245065 R 511145 CDS NP_414760.1 16128211 944911 complement(245961..246239) 1 NC_000913.3 translation inhibitor toxin of toxin-antitoxin pair YafQ/DinJ 246239 yafQ 944911 yafQ Escherichia coli str. K-12 substr. MG1655 translation inhibitor toxin of toxin-antitoxin pair YafQ/DinJ NP_414760.1 245961 R 511145 CDS NP_414761.1 16128212 944914 complement(246242..246502) 1 NC_000913.3 damage-inducible protein J; antitoxin of YafQ-DinJ toxin-antitoxin system 246502 dinJ 944914 dinJ Escherichia coli str. K-12 substr. MG1655 antitoxin of YafQ-DinJ toxin-antitoxin system NP_414761.1 246242 R 511145 CDS NP_414762.1 16128213 944899 246712..247461 1 NC_000913.3 putative lipoprotein; putative lipoprotein and C40 family peptidase 247461 yafL 944899 yafL Escherichia coli str. K-12 substr. MG1655 putative lipoprotein and C40 family peptidase NP_414762.1 246712 D 511145 CDS NP_414763.1 16128214 944913 247637..248134 1 NC_000913.3 RAYT REP element-mobilizing transposase; TnpA(REP) 248134 rayT 944913 rayT Escherichia coli str. K-12 substr. MG1655 RAYT REP element-mobilizing transposase; TnpA(REP) NP_414763.1 247637 D 511145 CDS b0229 944908 complement(248358..250070) 1 NC_000913.3 pseudogene, flagellar system protein, promoterless fragment; flagellar biosynthesis; <NULL_VALUE> 250070 lfhA 944908 lfhA Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 248358 R 511145 CDS b0230 944921 250072..250827 1 NC_000913.3 pseudogene, lateral flagellar motor protein fragment; <NULL_VALUE> 250827 lafU 944921 lafU Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 250072 D 511145 CDS NP_414766.1 16128217 944922 250898..251953 1 NC_000913.3 DNA polymerase IV; DNA polymerase IV, devoid of proofreading, damage-inducible protein P; DNA polymerase IV 251953 dinB 944922 dinB Escherichia coli str. K-12 substr. MG1655 DNA polymerase IV NP_414766.1 250898 D 511145 CDS NP_414767.1 16128218 944920 252005..252298 1 NC_000913.3 antitoxin of the YafO-YafN toxin-antitoxin system 252298 yafN 944920 yafN Escherichia coli str. K-12 substr. MG1655 antitoxin of the YafO-YafN toxin-antitoxin system NP_414767.1 252005 D 511145 CDS NP_414768.1 16128219 944916 252301..252699 1 NC_000913.3 mRNA interferase toxin of the YafO-YafN toxin-antitoxin system 252699 yafO 944916 yafO Escherichia coli str. K-12 substr. MG1655 mRNA interferase toxin of the YafO-YafN toxin-antitoxin system NP_414768.1 252301 D 511145 CDS NP_414769.1 16128220 944912 252709..253161 1 NC_000913.3 putative acyl-CoA transferase 253161 yafP 944912 yafP Escherichia coli str. K-12 substr. MG1655 putative acyl-CoA transferase NP_414769.1 252709 D 511145 CDS b0235 944924 253479..253685 1 NC_000913.3 pseudogene; <NULL_VALUE> 253685 ykfJ 944924 ykfJ Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 253479 D 511145 CDS b0236 947374 253702..254202 1 NC_000913.3 pseudogene, RF-1 domain family; probable peptide chain release factor; <NULL_VALUE> 254202 prfH 947374 prfH Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 253702 D 511145 CDS NP_414772.1 16128223 945013 complement(254259..255716) 1 NC_000913.3 aminoacyl-histidine dipeptidase (peptidase D) 255716 pepD 945013 pepD Escherichia coli str. K-12 substr. MG1655 aminoacyl-histidine dipeptidase (peptidase D) NP_414772.1 254259 R 511145 CDS NP_414773.1 16128224 944817 255977..256435 1 NC_000913.3 xanthine phosphoribosyltransferase; xanthine-guanine phosphoribosyltransferase 256435 gpt 944817 gpt Escherichia coli str. K-12 substr. MG1655 xanthine phosphoribosyltransferase; xanthine-guanine phosphoribosyltransferase NP_414773.1 255977 D 511145 CDS NP_414774.1 16128225 946039 256527..257771 1 NC_000913.3 fermentation-respiration switch protein; PTS Enzyme IIA(Glc)-binding protein; pNP-butyrate esterase activity 257771 frsA 946039 frsA Escherichia coli str. K-12 substr. MG1655 fermentation-respiration switch protein; PTS Enzyme IIA(Glc)-binding protein; pNP-butyrate esterase activity NP_414774.1 256527 D 511145 CDS b0240 945077 join(257829..257899,258676..259006) 1 NC_000913.3 pseudogene, sigma factor-binding protein, stimulates RNA polymerase holoenzyme formation;regulator; Surface structures; transcriptional regulator of cryptic csgA gene for curli surface fibers; <NULL_VALUE> 259006 crl 945077 crl Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 257829 D 511145 CDS NP_414776.1 16128227 944926 complement(259045..260100) 1 NC_000913.3 outer membrane pore protein E (E,Ic,NmpAB); outer membrane phosphoporin protein E 260100 phoE 944926 phoE Escherichia coli str. K-12 substr. MG1655 outer membrane phosphoporin protein E NP_414776.1 259045 R 511145 CDS NP_414777.1 16128228 946425 260388..261491 1 NC_000913.3 gamma-glutamate kinase 261491 proB 946425 proB Escherichia coli str. K-12 substr. MG1655 gamma-glutamate kinase NP_414777.1 260388 D 511145 CDS NP_414778.1 16128229 946680 261503..262756 1 NC_000913.3 gamma-glutamylphosphate reductase 262756 proA 946680 proA Escherichia coli str. K-12 substr. MG1655 gamma-glutamylphosphate reductase NP_414778.1 261503 D 511145 CDS b4626 5625552 complement(263150..263212) 1 NC_000913.3 pseudogene, YdiA family; <NULL_VALUE> 263212 ykfN 5625552 ykfN Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 263150 R 511145 CDS NP_414779.1 16128230 946726 complement(263328..263669) 1 NC_000913.3 CP4-6 prophage; toxin of the YkfI-YafW toxin-antitoxin system 263669 ykfI 946726 ykfI Escherichia coli str. K-12 substr. MG1655 CP4-6 prophage; toxin of the YkfI-YafW toxin-antitoxin system NP_414779.1 263328 R 511145 CDS NP_414780.1 16128231 944929 complement(263690..264007) 1 NC_000913.3 CP4-6 prophage; antitoxin of the YkfI-YafW toxin-antitoxin system 264007 yafW 944929 yafW Escherichia coli str. K-12 substr. MG1655 CP4-6 prophage; antitoxin of the YkfI-YafW toxin-antitoxin system NP_414780.1 263690 R 511145 CDS YP_588435.1 94541094 1450236 complement(264026..264247) 1 NC_000913.3 uncharacterized protein 264247 ykfH 1450236 ykfH Escherichia coli str. K-12 substr. MG1655 uncharacterized protein YP_588435.1 264026 R 511145 CDS NP_414781.1 16128232 944930 complement(264256..264732) 1 NC_000913.3 putative DNA repair protein; CP4-6 prophage; RadC-like JAB domain protein 264732 ykfG 944930 ykfG Escherichia coli str. K-12 substr. MG1655 CP4-6 prophage; RadC-like JAB domain protein NP_414781.1 264256 R 511145 CDS NP_414782.1 16128233 944931 complement(264748..265206) 1 NC_000913.3 CP4-6 prophage; uncharacterized protein 265206 yafX 944931 yafX Escherichia coli str. K-12 substr. MG1655 CP4-6 prophage; uncharacterized protein NP_414782.1 264748 R 511145 CDS NP_414783.1 16128234 948839 complement(265304..265543) 1 NC_000913.3 CP4-6 prophage; uncharacterized protein 265543 ykfF 948839 ykfF Escherichia coli str. K-12 substr. MG1655 CP4-6 prophage; uncharacterized protein NP_414783.1 265304 R 511145 CDS NP_414784.1 16128235 946846 complement(265620..266087) 1 NC_000913.3 CP4-6 prophage; uncharacterized protein 266087 ykfB 946846 ykfB Escherichia coli str. K-12 substr. MG1655 CP4-6 prophage; uncharacterized protein NP_414784.1 265620 R 511145 CDS NP_414785.4 145698221 944934 complement(266110..266553) 1 NC_000913.3 hypothetical transcriptional regulator; lipoprotein, inner membrane; overproduction stimulates degP expression; CP4-6 prophage 266553 yafY 944934 yafY Escherichia coli str. K-12 substr. MG1655 lipoprotein, inner membrane; overproduction stimulates degP expression; CP4-6 prophage NP_414785.4 266110 R 511145 CDS b4627 5625553 complement(266553..266774) 1 NC_000913.3 pseudogene, CP4-6 putative prophage remnant;Phage or Prophage Related; <NULL_VALUE> 266774 ykfL 5625553 ykfL Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 266553 R 511145 CDS b4628 5625554 complement(266776..266967) 1 NC_000913.3 CP4-6 prophage; putative DNA-binding transcriptional regulator;Phage or Prophage Related; <NULL_VALUE> 266967 ykfK 5625554 ykfK Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 266776 R 511145 CDS NP_414786.4 90111102 945373 complement(267184..268005) 1 NC_000913.3 CP4-6 prophage; conserved protein 268005 yafZ 945373 yafZ Escherichia coli str. K-12 substr. MG1655 CP4-6 prophage; conserved protein NP_414786.4 267184 R 511145 CDS NP_414787.4 90111103 949004 complement(268097..268960) 1 NC_000913.3 putative GTP-binding protein; CP4-6 prophage; putative GTP-binding protein 268960 ykfA 949004 ykfA Escherichia coli str. K-12 substr. MG1655 CP4-6 prophage; putative GTP-binding protein NP_414787.4 268097 R 511145 CDS NP_414788.1 16128239 945417 complement(269289..270182) 1 NC_000913.3 peroxide resistance protein; CP4-6 prophage; putative DNA-binding transcriptional regulator 270182 perR 945417 perR Escherichia coli str. K-12 substr. MG1655 CP4-6 prophage; putative DNA-binding transcriptional regulator NP_414788.1 269289 R 511145 CDS b4587 5061501 join(270278..270535,271764..272189) 1 NC_000913.3 pseudogene, IS911 transposase A;IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related; <NULL_VALUE> 272189 insN 5061501 insN Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 270278 D 511145 CDS NP_414790.1 16128241 949005 270603..271754 1 NC_000913.3 IS30 transposase 271754 insI1 949005 insI1 Escherichia coli str. K-12 substr. MG1655 IS30 transposase NP_414790.1 270603 D 511145 CDS b0258 944940 272847..273954 1 NC_000913.3 CP4-6 prophage; conserved protein;Phage or Prophage Related; <NULL_VALUE> 273954 ykfC 944940 ykfC Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 272847 D 511145 CDS NP_414793.1 16128244 944941 complement(274101..275117) 1 NC_000913.3 IS5 transposase and trans-activator 275117 insH1 944941 insH1 Escherichia coli str. K-12 substr. MG1655 IS5 transposase and trans-activator NP_414793.1 274101 R 511145 CDS NP_414794.4 90111105 946284 275325..276728 1 NC_000913.3 CP4-6 prophage; putative S-methylmethionine transporter 276728 mmuP 946284 mmuP Escherichia coli str. K-12 substr. MG1655 CP4-6 prophage; putative S-methylmethionine transporter NP_414794.4 275325 D 511145 CDS NP_414795.1 16128246 946143 276715..277647 1 NC_000913.3 CP4-6 prophage; S-methylmethionine:homocysteine methyltransferase 277647 mmuM 946143 mmuM Escherichia coli str. K-12 substr. MG1655 CP4-6 prophage; S-methylmethionine:homocysteine methyltransferase NP_414795.1 276715 D 511145 CDS NP_414796.2 90111106 947676 complement(277756..278802) 1 NC_000913.3 putative ATP-binding component of a transport system; CP4-6 prophage; putative ferric transporter subunit 278802 afuC 947676 afuC Escherichia coli str. K-12 substr. MG1655 CP4-6 prophage; putative ferric transporter subunit NP_414796.2 277756 R 511145 CDS b0263 947073 complement(278814..279161) 1 NC_000913.3 pseudogene, CP4-6 prophage; ABC transporter permease family;Phage or Prophage Related; <NULL_VALUE> 279161 afuB 947073 afuB Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 278814 R 511145 CDS NP_414798.1 16128249 947698 complement(279178..279681) 1 NC_000913.3 IS1 transposase B 279681 insB1 947698 insB1 Escherichia coli str. K-12 substr. MG1655 IS1 transposase B NP_414798.1 279178 R 511145 CDS NP_414799.1 16128250 944946 complement(279600..279875) 1 NC_000913.3 IS1 repressor TnpA 279875 insA 944946 insA Escherichia coli str. K-12 substr. MG1655 IS1 repressor TnpA NP_414799.1 279600 R 511145 CDS b4708 14678508 279931..280104 1 NC_000913.3 IS30 transposase;IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related; <NULL_VALUE> 280104 insI1 14678508 insI1 Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 279931 D 511145 CDS b4505 1450237 complement(280114..280362) 1 NC_000913.3 pseudogene, IS3 family transposase family; <NULL_VALUE> 280362 insX 1450237 insX Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 280114 R 511145 CDS b0266 944944 complement(280427..280735) 1 NC_000913.3 pseudogene, CP4-6 prophage;Phage or Prophage Related; <NULL_VALUE> 280735 yagB 944944 yagB Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 280427 R 511145 CDS NP_414801.1 16128252 944937 complement(280829..281983) 1 NC_000913.3 CP4-6 prophage; putative DNA-binding transcriptional regulator 281983 yagA 944937 yagA Escherichia coli str. K-12 substr. MG1655 CP4-6 prophage; putative DNA-binding transcriptional regulator NP_414801.1 280829 R 511145 CDS NP_414802.2 345452715 944925 282278..283186 1 NC_000913.3 putative lyase/synthase; 2-keto-3-deoxy gluconate (KDG) aldolase; CP4-6 prophage 283186 yagE 944925 yagE Escherichia coli str. K-12 substr. MG1655 2-keto-3-deoxy gluconate (KDG) aldolase; CP4-6 prophage NP_414802.2 282278 D 511145 CDS NP_414803.1 16128254 944928 283201..285168 1 NC_000913.3 putative dehydratase; CP4-6 prophage; dehydratase family protein 285168 yagF 944928 yagF Escherichia coli str. K-12 substr. MG1655 CP4-6 prophage; dehydratase family protein NP_414803.1 283201 D 511145 CDS NP_414804.1 16128255 944947 285395..286777 1 NC_000913.3 putative permease; CP4-6 prophage; putative sugar transporter 286777 yagG 944947 yagG Escherichia coli str. K-12 substr. MG1655 CP4-6 prophage; putative sugar transporter NP_414804.1 285395 D 511145 CDS NP_414805.1 16128256 944949 286789..288399 1 NC_000913.3 putative beta-xylosidase; CP4-6 prophage; putative xylosidase/arabinosidase 288399 yagH 944949 yagH Escherichia coli str. K-12 substr. MG1655 CP4-6 prophage; putative xylosidase/arabinosidase NP_414805.1 286789 D 511145 CDS NP_414806.1 16128257 945016 complement(288404..289162) 1 NC_000913.3 putative regulator; CP4-6 prophage; putative DNA-binding transcriptional regulator 289162 yagI 945016 yagI Escherichia coli str. K-12 substr. MG1655 CP4-6 prophage; putative DNA-binding transcriptional regulator NP_414806.1 288404 R 511145 CDS NP_414807.1 16128258 944844 complement(289301..290305) 1 NC_000913.3 ornithine carbamoyltransferase 2, chain F; ornithine carbamoyltransferase 2, chain F; CP4-6 prophage 290305 argF 944844 argF Escherichia coli str. K-12 substr. MG1655 ornithine carbamoyltransferase 2, chain F; CP4-6 prophage NP_414807.1 289301 R 511145 CDS b4688 7751632 290429..290633 1 NC_000913.3 pseudogene; <NULL_VALUE> 290633 ykgS 7751632 ykgS Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 290429 D 511145 CDS NP_414808.1 16128259 944950 complement(290649..291152) 1 NC_000913.3 IS1 transposase B 291152 insB1 944950 insB1 Escherichia coli str. K-12 substr. MG1655 IS1 transposase B NP_414808.1 290649 R 511145 CDS NP_414809.1 16128260 944951 complement(291071..291346) 1 NC_000913.3 IS1 repressor TnpA 291346 insA 944951 insA Escherichia coli str. K-12 substr. MG1655 IS1 repressor TnpA NP_414809.1 291071 R 511145 CDS b0276 949094 291404..292231 1 NC_000913.3 CP4-6 prophage; uncharacterized protein;Phage or Prophage Related; <NULL_VALUE> 292231 yagJ 949094 yagJ Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 291404 D 511145 CDS NP_414811.1 16128262 945847 complement(292322..292948) 1 NC_000913.3 CP4-6 prophage; conserved protein 292948 yagK 945847 yagK Escherichia coli str. K-12 substr. MG1655 CP4-6 prophage; conserved protein NP_414811.1 292322 R 511145 CDS NP_414812.1 16128263 945845 complement(293220..293918) 1 NC_000913.3 DNA-binding protein; CP4-6 prophage; DNA-binding protein 293918 yagL 945845 yagL Escherichia coli str. K-12 substr. MG1655 CP4-6 prophage; DNA-binding protein NP_414812.1 293220 R 511145 CDS NP_414813.1 16128264 944959 complement(293945..294799) 1 NC_000913.3 CP4-6 prophage; uncharacterized protein 294799 yagM 944959 yagM Escherichia coli str. K-12 substr. MG1655 CP4-6 prophage; uncharacterized protein NP_414813.1 293945 R 511145 CDS NP_414814.1 16128265 945349 complement(295139..295579) 1 NC_000913.3 CP4-6 prophage; uncharacterized protein 295579 yagN 945349 yagN Escherichia coli str. K-12 substr. MG1655 CP4-6 prophage; uncharacterized protein NP_414814.1 295139 R 511145 CDS NP_414815.1 16128266 947351 complement(295696..297096) 1 NC_000913.3 putative phage integrase; CP4-6 prophage; putative phage integrase 297096 intF 947351 intF Escherichia coli str. K-12 substr. MG1655 CP4-6 prophage; putative phage integrase NP_414815.1 295696 R 511145 CDS b4694 7751633 complement(297381..297719) 1 NC_000913.3 pseudogene, LysR family, fragment;putative regulator; Not classified; putative transcriptional regulator LYSR-type; <NULL_VALUE> 297719 yagP 7751633 yagP Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 297381 R 511145 CDS b4695 7751634 complement(297714..297791) 1 NC_000913.3 pseudogene, MobA-related; <NULL_VALUE> 297791 ykgT 7751634 ykgT Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 297714 R 511145 CDS NP_414817.1 16128268 945010 complement(297770..298726) 1 NC_000913.3 moco insertion factor for PaoABC aldehyde oxidoreductase 298726 paoD 945010 paoD Escherichia coli str. K-12 substr. MG1655 moco insertion factor for PaoABC aldehyde oxidoreductase NP_414817.1 297770 R 511145 CDS NP_414818.1 16128269 944961 complement(298736..300934) 1 NC_000913.3 PaoABC aldehyde oxidoreductase, Moco-containing subunit 300934 paoC 944961 paoC Escherichia coli str. K-12 substr. MG1655 PaoABC aldehyde oxidoreductase, Moco-containing subunit NP_414818.1 298736 R 511145 CDS NP_414819.1 16128270 945710 complement(300931..301887) 1 NC_000913.3 PaoABC aldehyde oxidoreductase, FAD-containing subunit 301887 paoB 945710 paoB Escherichia coli str. K-12 substr. MG1655 PaoABC aldehyde oxidoreductase, FAD-containing subunit NP_414819.1 300931 R 511145 CDS NP_414820.1 16128271 945330 complement(301884..302573) 1 NC_000913.3 putative xanthine dehydrogenase; PaoABC aldehyde oxidoreductase, 2Fe-2S subunit 302573 paoA 945330 paoA Escherichia coli str. K-12 substr. MG1655 PaoABC aldehyde oxidoreductase, 2Fe-2S subunit NP_414820.1 301884 R 511145 CDS NP_414821.1 16128272 945677 302991..303605 1 NC_000913.3 DUF1440 family inner membrane protein 303605 yagU 945677 yagU Escherichia coli str. K-12 substr. MG1655 DUF1440 family inner membrane protein NP_414821.1 302991 D 511145 CDS NP_414822.1 16128273 945905 complement(303853..304182) 1 NC_000913.3 putative ferredoxin; UPF0153 cysteine cluster protein 304182 ykgJ 945905 ykgJ Escherichia coli str. K-12 substr. MG1655 UPF0153 cysteine cluster protein NP_414822.1 303853 R 511145 CDS NP_414823.2 90111108 946631 complement(304495..305205) 1 NC_000913.3 ECP production pilus chaperone 305205 ecpE 946631 ecpE Escherichia coli str. K-12 substr. MG1655 ECP production pilus chaperone NP_414823.2 304495 R 511145 CDS NP_414824.1 16128275 947349 complement(305174..306817) 1 NC_000913.3 putative receptor; polymerized tip adhesin of ECP fibers 306817 ecpD 947349 ecpD Escherichia coli str. K-12 substr. MG1655 polymerized tip adhesin of ECP fibers NP_414824.1 305174 R 511145 CDS NP_414825.1 16128276 947606 complement(306807..309332) 1 NC_000913.3 putative enzyme; ECP production outer membrane protein 309332 ecpC 947606 ecpC Escherichia coli str. K-12 substr. MG1655 ECP production outer membrane protein NP_414825.1 306807 R 511145 CDS NP_414826.1 16128277 948806 complement(309358..310026) 1 NC_000913.3 ECP production pilus chaperone 310026 ecpB 948806 ecpB Escherichia coli str. K-12 substr. MG1655 ECP production pilus chaperone NP_414826.1 309358 R 511145 CDS NP_414827.1 16128278 948759 complement(310084..310671) 1 NC_000913.3 ECP pilin 310671 ecpA 948759 ecpA Escherichia coli str. K-12 substr. MG1655 ECP pilin NP_414827.1 310084 R 511145 CDS NP_414828.1 16128279 944966 complement(310746..311336) 1 NC_000913.3 putative regulator; putative transcriptional regulator for the ecp operon 311336 ecpR 944966 ecpR Escherichia coli str. K-12 substr. MG1655 putative transcriptional regulator for the ecp operon NP_414828.1 310746 R 511145 CDS NP_414829.1 16128280 944962 312112..312339 1 NC_000913.3 uncharacterized protein 312339 ykgL 944962 ykgL Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_414829.1 312112 D 511145 CDS YP_588437.1 94541137 1450238 complement(312374..312514) 1 NC_000913.3 RpmJ-like protein 312514 ykgO 1450238 ykgO Escherichia coli str. K-12 substr. MG1655 RpmJ-like protein YP_588437.1 312374 R 511145 CDS NP_414830.1 16128281 944960 complement(312514..312777) 1 NC_000913.3 50S ribosomal protein L31 type B; alternative L31 utilized during zinc limitation 312777 ykgM 944960 ykgM Escherichia coli str. K-12 substr. MG1655 50S ribosomal protein L31 type B; alternative L31 utilized during zinc limitation NP_414830.1 312514 R 511145 CDS YP_002791238.1 226524699 7751635 complement(313141..313242) 1 NC_000913.3 uncharacterized protein 313242 ykgR 7751635 ykgR Escherichia coli str. K-12 substr. MG1655 uncharacterized protein YP_002791238.1 313141 R 511145 CDS b4630 5625556 complement(313716..313805) 1 NC_000913.3 pseudogene, oxidoreductase family; <NULL_VALUE> 313805 ykgP 5625556 ykgP Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 313716 R 511145 CDS b0297 944957 314357..315228 1 NC_000913.3 pseudogene, attaching and effacing protein homology;factor; Not classified; <NULL_VALUE> 315228 eaeH 944957 eaeH Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 314357 D 511145 CDS NP_414832.2 226524700 944952 315291..315590 1 NC_000913.3 IS3 transposase A 315590 insE1 944952 insE1 Escherichia coli str. K-12 substr. MG1655 IS3 transposase A NP_414832.2 315291 D 511145 CDS NP_414833.1 16128284 944948 315587..316453 1 NC_000913.3 IS3 transposase B 316453 insF1 944948 insF1 Escherichia coli str. K-12 substr. MG1655 IS3 transposase B NP_414833.1 315587 D 511145 CDS b0300 944956 complement(316486..317169) 1 NC_000913.3 pseudogene, AraC family;putative regulator; Not classified; putative ARAC-type regulatory protein; <NULL_VALUE> 317169 ykgA 944956 ykgA Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 316486 R 511145 CDS b4631 5625557 317439..317567 1 NC_000913.3 pseudogene, putative dehydrogenase; <NULL_VALUE> 317567 ykgQ 5625557 ykgQ Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 317439 D 511145 CDS NP_414835.2 90111110 944974 complement(317726..318319) 1 NC_000913.3 reactive chlorine species (RCS) stress resistance inner membrane protein 318319 rclC 944974 rclC Escherichia coli str. K-12 substr. MG1655 reactive chlorine species (RCS) stress resistance inner membrane protein NP_414835.2 317726 R 511145 CDS NP_414837.2 90111111 945658 complement(318331..318567) 1 NC_000913.3 the overlapping ORF b0302 on the opposite strand is no longer thought to be an actual gene, and has been deaccessioned; reactive chlorine species (RCS) stress resistance periplasmic protein 318567 rclB 945658 rclB Escherichia coli str. K-12 substr. MG1655 reactive chlorine species (RCS) stress resistance periplasmic protein NP_414837.2 318331 R 511145 CDS NP_414838.2 90111112 946092 complement(318676..320001) 1 NC_000913.3 putative oxidoreductase; reactive chlorine stress species (RCS) resistance protein; pyridine nucleotide-dependent disulfide oxidoreductase family 320001 rclA 946092 rclA Escherichia coli str. K-12 substr. MG1655 reactive chlorine stress species (RCS) resistance protein; pyridine nucleotide-dependent disulfide oxidoreductase family NP_414838.2 318676 R 511145 CDS NP_414839.1 16128290 945616 320227..321081 1 NC_000913.3 putative ARAC-type regulatory protein; reactive chlorine species (RCS)-specific activator of the rcl genes 321081 rclR 945616 rclR Escherichia coli str. K-12 substr. MG1655 reactive chlorine species (RCS)-specific activator of the rcl genes NP_414839.1 320227 D 511145 CDS NP_414840.1 16128291 948438 321608..322327 1 NC_000913.3 putative dehydrogenase subunit; cysteine-rich LutA family protein; putative electron transport chain YkgEFG component 322327 ykgE 948438 ykgE Escherichia coli str. K-12 substr. MG1655 cysteine-rich LutA family protein; putative electron transport chain YkgEFG component NP_414840.1 321608 D 511145 CDS NP_414841.1 16128292 944980 322338..323765 1 NC_000913.3 ferridoxin-like LutB family protein; putative electron transport chain YkgEFG component 323765 ykgF 944980 ykgF Escherichia coli str. K-12 substr. MG1655 ferridoxin-like LutB family protein; putative electron transport chain YkgEFG component NP_414841.1 322338 D 511145 CDS NP_414842.4 90111113 945906 323758..324453 1 NC_000913.3 putative transporter; LutC family protein; putative electron transport chain YkgEFG component 324453 ykgG 945906 ykgG Escherichia coli str. K-12 substr. MG1655 LutC family protein; putative electron transport chain YkgEFG component NP_414842.4 323758 D 511145 CDS NP_414844.1 16128295 947513 complement(324696..325364) 1 NC_000913.3 putative inner membrane protein 325364 ykgH 947513 ykgH Escherichia coli str. K-12 substr. MG1655 putative inner membrane protein NP_414844.1 324696 R 511145 CDS NP_414845.1 16128296 945716 complement(325577..327247) 1 NC_000913.3 choline dehydrogenase, a flavoprotein 327247 betA 945716 betA Escherichia coli str. K-12 substr. MG1655 choline dehydrogenase, a flavoprotein NP_414845.1 325577 R 511145 CDS NP_414846.1 16128297 947376 complement(327261..328733) 1 NC_000913.3 NAD+-dependent betaine aldehyde dehydrogenase; betaine aldehyde dehydrogenase, NAD-dependent 328733 betB 947376 betB Escherichia coli str. K-12 substr. MG1655 betaine aldehyde dehydrogenase, NAD-dependent NP_414846.1 327261 R 511145 CDS NP_414847.3 49176011 944981 complement(328747..329334) 1 NC_000913.3 probably transcriptional repressor of bet genes; choline-inducible betIBA-betT divergent operon transcriptional repressor 329334 betI 944981 betI Escherichia coli str. K-12 substr. MG1655 choline-inducible betIBA-betT divergent operon transcriptional repressor NP_414847.3 328747 R 511145 CDS NP_414848.1 16128299 945079 329463..331496 1 NC_000913.3 high-affinity choline transport; choline transporter of high affinity 331496 betT 945079 betT Escherichia coli str. K-12 substr. MG1655 choline transporter of high affinity NP_414848.1 329463 D 511145 CDS NP_414849.1 16128300 947459 332371..333459 1 NC_000913.3 c-di-GMP-specific phosphodiesterase 333459 yahA 947459 yahA Escherichia coli str. K-12 substr. MG1655 c-di-GMP-specific phosphodiesterase NP_414849.1 332371 D 511145 CDS NP_414850.1 16128301 945278 complement(333501..334433) 1 NC_000913.3 putative transcriptional regulator LYSR-type; putative DNA-bindng transcriptional regulator 334433 yahB 945278 yahB Escherichia coli str. K-12 substr. MG1655 putative DNA-bindng transcriptional regulator NP_414850.1 333501 R 511145 CDS NP_414851.1 16128302 947337 complement(334525..335022) 1 NC_000913.3 putative inner membrane protein 335022 yahC 947337 yahC Escherichia coli str. K-12 substr. MG1655 putative inner membrane protein NP_414851.1 334525 R 511145 CDS NP_414852.1 16128303 947681 335280..335885 1 NC_000913.3 putative transcription factor; ankyrin repeat protein 335885 yahD 947681 yahD Escherichia coli str. K-12 substr. MG1655 ankyrin repeat protein NP_414852.1 335280 D 511145 CDS NP_414853.1 16128304 947134 335925..336788 1 NC_000913.3 DUF2877 family protein 336788 yahE 947134 yahE Escherichia coli str. K-12 substr. MG1655 DUF2877 family protein NP_414853.1 335925 D 511145 CDS NP_414854.1 16128305 947298 336778..338325 1 NC_000913.3 putative oxidoreductase subunit; putative NAD(P)-binding succinyl-CoA synthase 338325 yahF 947298 yahF Escherichia coli str. K-12 substr. MG1655 putative NAD(P)-binding succinyl-CoA synthase NP_414854.1 336778 D 511145 CDS NP_414855.1 16128306 945379 338325..339743 1 NC_000913.3 DUF1116 family protein 339743 yahG 945379 yahG Escherichia coli str. K-12 substr. MG1655 DUF1116 family protein NP_414855.1 338325 D 511145 CDS NP_414857.1 16128308 944984 340165..341115 1 NC_000913.3 putative kinase; carbamate kinase-like protein 341115 yahI 944984 yahI Escherichia coli str. K-12 substr. MG1655 carbamate kinase-like protein NP_414857.1 340165 D 511145 CDS NP_414858.1 16128309 944976 341125..342507 1 NC_000913.3 putative deaminase; putative metallo-dependent hydrolase domain deaminase 342507 yahJ 944976 yahJ Escherichia coli str. K-12 substr. MG1655 putative metallo-dependent hydrolase domain deaminase NP_414858.1 341125 D 511145 CDS NP_414859.1 16128310 944975 342884..343933 1 NC_000913.3 putative oxidoreductase; aldehyde reductase, NADPH-dependent, Zn-containing, broad specificity 343933 yahK 944975 yahK Escherichia coli str. K-12 substr. MG1655 aldehyde reductase, NADPH-dependent, Zn-containing, broad specificity NP_414859.1 342884 D 511145 CDS NP_414860.1 16128311 944970 344176..344991 1 NC_000913.3 uncharacterized protein 344991 yahL 944970 yahL Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_414860.1 344176 D 511145 CDS NP_414861.2 90111114 944969 345404..345649 1 NC_000913.3 uncharacterized protein 345649 yahM 944969 yahM Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_414861.2 345404 D 511145 CDS NP_414862.1 16128313 944968 complement(345666..346337) 1 NC_000913.3 putative cytochrome subunit of dehydrogenase; amino acid exporter for proline, lysine, glutamate, homoserine 346337 yahN 944968 yahN Escherichia coli str. K-12 substr. MG1655 amino acid exporter for proline, lysine, glutamate, homoserine NP_414862.1 345666 R 511145 CDS NP_414863.1 16128314 944985 346484..346759 1 NC_000913.3 periplasmic protein, function unknown, YhcN family 346759 yahO 944985 yahO Escherichia coli str. K-12 substr. MG1655 periplasmic protein, function unknown, YhcN family NP_414863.1 346484 D 511145 CDS NP_414864.1 16128315 944987 complement(346857..348443) 1 NC_000913.3 regulator for prp operon; propionate catabolism operon regulatory protein 348443 prpR 944987 prpR Escherichia coli str. K-12 substr. MG1655 propionate catabolism operon regulatory protein NP_414864.1 346857 R 511145 CDS NP_414865.1 16128316 944990 348682..349572 1 NC_000913.3 putative phosphonomutase 2; 2-methylisocitrate lyase 349572 prpB 944990 prpB Escherichia coli str. K-12 substr. MG1655 2-methylisocitrate lyase NP_414865.1 348682 D 511145 CDS NP_414867.1 16128318 947528 350012..351181 1 NC_000913.3 putative citrate synthase; propionate metabolism?; 2-methylcitrate synthase 351181 prpC 947528 prpC Escherichia coli str. K-12 substr. MG1655 2-methylcitrate synthase NP_414867.1 350012 D 511145 CDS NP_414868.1 16128319 945931 351215..352666 1 NC_000913.3 2-methylcitrate dehydratase 352666 prpD 945931 prpD Escherichia coli str. K-12 substr. MG1655 2-methylcitrate dehydratase NP_414868.1 351215 D 511145 CDS NP_414869.1 16128320 946891 352706..354592 1 NC_000913.3 putative propionyl-CoA synthetase; propionate--CoA ligase 354592 prpE 946891 prpE Escherichia coli str. K-12 substr. MG1655 propionate--CoA ligase NP_414869.1 352706 D 511145 CDS NP_414870.1 16128321 944994 354922..356181 1 NC_000913.3 cytosine permease/transport; cytosine transporter 356181 codB 944994 codB Escherichia coli str. K-12 substr. MG1655 cytosine transporter NP_414870.1 354922 D 511145 CDS NP_414871.1 16128322 944996 356171..357454 1 NC_000913.3 cytosine/isoguanine deaminase 357454 codA 944996 codA Escherichia coli str. K-12 substr. MG1655 cytosine/isoguanine deaminase NP_414871.1 356171 D 511145 CDS NP_414872.3 157783149 945001 complement(357791..358690) 1 NC_000913.3 cyn operon positive regulator; transcriptional activator of cyn operon; autorepressor 358690 cynR 945001 cynR Escherichia coli str. K-12 substr. MG1655 transcriptional activator of cyn operon; autorepressor NP_414872.3 357791 R 511145 CDS NP_414873.1 16128324 946548 358799..359458 1 NC_000913.3 carbonic anhydrase 359458 cynT 946548 cynT Escherichia coli str. K-12 substr. MG1655 carbonic anhydrase NP_414873.1 358799 D 511145 CDS NP_414874.1 16128325 948998 359489..359959 1 NC_000913.3 cyanate aminohydrolase, cyanase; cyanate aminohydrolase 359959 cynS 948998 cynS Escherichia coli str. K-12 substr. MG1655 cyanate aminohydrolase NP_414874.1 359489 D 511145 CDS NP_414875.1 16128326 946770 359992..361146 1 NC_000913.3 cyanate transport; putative cyanate transporter 361146 cynX 946770 cynX Escherichia coli str. K-12 substr. MG1655 putative cyanate transporter NP_414875.1 359992 D 511145 CDS NP_414876.1 16128327 945674 complement(361249..361860) 1 NC_000913.3 thiogalactoside acetyltransferase 361860 lacA 945674 lacA Escherichia coli str. K-12 substr. MG1655 thiogalactoside acetyltransferase NP_414876.1 361249 R 511145 CDS NP_414877.1 16128328 949083 complement(361926..363179) 1 NC_000913.3 galactoside permease (lactose permease, M protein) (MFS family); lactose permease 363179 lacY 949083 lacY Escherichia coli str. K-12 substr. MG1655 lactose permease NP_414877.1 361926 R 511145 CDS NP_414878.1 16128329 945006 complement(363231..366305) 1 NC_000913.3 beta-D-galactosidase 366305 lacZ 945006 lacZ Escherichia coli str. K-12 substr. MG1655 beta-D-galactosidase NP_414878.1 363231 R 511145 CDS NP_414879.3 49176012 945007 complement(366428..367510) 1 NC_000913.3 transcriptional repressor of the lac operon; lactose-inducible lac operon transcriptional repressor 367510 lacI 945007 lacI Escherichia coli str. K-12 substr. MG1655 lactose-inducible lac operon transcriptional repressor NP_414879.3 366428 R 511145 CDS NP_414880.2 145698223 945938 complement(367587..368420) 1 NC_000913.3 transcriptional regulator for mhp operon; mhp operon transcriptional activator 368420 mhpR 945938 mhpR Escherichia coli str. K-12 substr. MG1655 mhp operon transcriptional activator NP_414880.2 367587 R 511145 CDS NP_414881.1 16128332 945197 368611..370275 1 NC_000913.3 3-(3-hydroxyphenyl)propionate hydroxylase 370275 mhpA 945197 mhpA Escherichia coli str. K-12 substr. MG1655 3-(3-hydroxyphenyl)propionate hydroxylase NP_414881.1 368611 D 511145 CDS NP_414882.1 16128333 945047 370277..371221 1 NC_000913.3 2,3-dihydroxyphenylpropionate 1,2-dioxygenase 371221 mhpB 945047 mhpB Escherichia coli str. K-12 substr. MG1655 2,3-dihydroxyphenylpropionate 1,2-dioxygenase NP_414882.1 370277 D 511145 CDS NP_414883.5 459201369 944954 371239..372105 1 NC_000913.3 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase 372105 mhpC 944954 mhpC Escherichia coli str. K-12 substr. MG1655 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase NP_414883.5 371239 D 511145 CDS NP_414884.2 90111116 944768 372115..372924 1 NC_000913.3 2-keto-4-pentenoate hydratase 372924 mhpD 944768 mhpD Escherichia coli str. K-12 substr. MG1655 2-keto-4-pentenoate hydratase NP_414884.2 372115 D 511145 CDS NP_414885.1 16128336 945008 372921..373871 1 NC_000913.3 acetaldehyde dehydrogenase; acetaldehyde-CoA dehydrogenase II, NAD-binding 373871 mhpF 945008 mhpF Escherichia coli str. K-12 substr. MG1655 acetaldehyde-CoA dehydrogenase II, NAD-binding NP_414885.1 372921 D 511145 CDS NP_414886.1 16128337 945012 373868..374881 1 NC_000913.3 4-hydroxy-2-ketovalerate aldolase; 4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase, class I 374881 mhpE 945012 mhpE Escherichia coli str. K-12 substr. MG1655 4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase, class I NP_414886.1 373868 D 511145 CDS NP_414887.2 90111117 944997 375459..376670 1 NC_000913.3 putative transport protein; 3-hydroxyphenylpropionic transporter 376670 mhpT 944997 mhpT Escherichia coli str. K-12 substr. MG1655 3-hydroxyphenylpropionic transporter NP_414887.2 375459 D 511145 CDS NP_414888.4 90111118 944993 376772..377311 1 NC_000913.3 DUF2058 family protein 377311 yaiL 944993 yaiL Escherichia coli str. K-12 substr. MG1655 DUF2058 family protein NP_414888.4 376772 D 511145 CDS NP_414889.1 16128340 944991 complement(377535..378368) 1 NC_000913.3 putative S-formylglutathione hydrolase; S-formylglutathione hydrolase 378368 frmB 944991 frmB Escherichia coli str. K-12 substr. MG1655 S-formylglutathione hydrolase NP_414889.1 377535 R 511145 CDS NP_414890.1 16128341 944988 complement(378462..379571) 1 NC_000913.3 alcohol dehydrogenase class III; formaldehyde dehydrogenase, glutathione-dependent; alcohol dehydrogenase class III/glutathione-dependent formaldehyde dehydrogenase 379571 frmA 944988 frmA Escherichia coli str. K-12 substr. MG1655 alcohol dehydrogenase class III/glutathione-dependent formaldehyde dehydrogenase NP_414890.1 378462 R 511145 CDS NP_414891.4 162135894 944986 complement(379606..379881) 1 NC_000913.3 repressor of frmRAB; regulator protein that represses frmRAB operon 379881 frmR 944986 frmR Escherichia coli str. K-12 substr. MG1655 regulator protein that represses frmRAB operon NP_414891.4 379606 R 511145 CDS NP_414892.1 16128343 945014 complement(380069..380842) 1 NC_000913.3 outer membrane protein 380842 yaiO 945014 yaiO Escherichia coli str. K-12 substr. MG1655 outer membrane protein NP_414892.1 380069 R 511145 CDS b4579 4056039 complement(join(380844..381259,382591..382872)) 1 NC_000913.3 pseudogene, interrupted by IS2A, acetyltransferase homolog; nonfunctional; interruped by IS2; putative transferase; <NULL_VALUE> 382872 yaiX 4056039 yaiX Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 380844 R 511145 CDS NP_414894.2 145698224 945025 381351..381716 1 NC_000913.3 IS2 repressor TnpA 381716 insC1 945025 insC1 Escherichia coli str. K-12 substr. MG1655 IS2 repressor TnpA NP_414894.2 381351 D 511145 CDS NP_414895.1 16128346 945203 381674..382579 1 NC_000913.3 IS2 transposase TnpB 382579 insD1 945203 insD1 Escherichia coli str. K-12 substr. MG1655 IS2 transposase TnpB NP_414895.1 381674 D 511145 CDS NP_414897.1 16128348 945308 complement(382739..383935) 1 NC_000913.3 polysaccharide metabolism; putative family 2 glycosyltransferase 383935 yaiP 945308 yaiP Escherichia coli str. K-12 substr. MG1655 putative family 2 glycosyltransferase NP_414897.1 382739 R 511145 CDS NP_414898.4 90111121 946967 complement(384059..384616) 1 NC_000913.3 putative PIG-L family deacetylase 384616 yaiS 946967 yaiS Escherichia coli str. K-12 substr. MG1655 putative PIG-L family deacetylase NP_414898.4 384059 R 511145 CDS NP_414899.2 90111122 945030 385232..386194 1 NC_000913.3 taurine transport system periplasmic protein; taurine transporter subunit 386194 tauA 945030 tauA Escherichia coli str. K-12 substr. MG1655 taurine transporter subunit NP_414899.2 385232 D 511145 CDS NP_414900.1 16128351 945027 386207..386974 1 NC_000913.3 taurine ATP-binding component of a transport system; taurine transporter subunit 386974 tauB 945027 tauB Escherichia coli str. K-12 substr. MG1655 taurine transporter subunit NP_414900.1 386207 D 511145 CDS NP_414901.1 16128352 945026 386971..387798 1 NC_000913.3 taurine transport system permease protein; taurine transporter subunit 387798 tauC 945026 tauC Escherichia coli str. K-12 substr. MG1655 taurine transporter subunit NP_414901.1 386971 D 511145 CDS NP_414902.1 16128353 945021 387795..388646 1 NC_000913.3 taurine dioxygenase, 2-oxoglutarate-dependent 388646 tauD 945021 tauD Escherichia coli str. K-12 substr. MG1655 taurine dioxygenase, 2-oxoglutarate-dependent NP_414902.1 387795 D 511145 CDS NP_414903.4 90111123 945017 complement(388753..389727) 1 NC_000913.3 5-aminolevulinate dehydratase = porphobilinogen synthase; 5-aminolevulinate dehydratase (porphobilinogen synthase) 389727 hemB 945017 hemB Escherichia coli str. K-12 substr. MG1655 5-aminolevulinate dehydratase (porphobilinogen synthase) NP_414903.4 388753 R 511145 CDS b4580 4056040 join(390251..391708,392970..394418) 1 NC_000913.3 pseudogene, autotransporter family;putative structure; Not classified; interrupted by IS3; putative flagellin structural protein; <NULL_VALUE> 394418 yaiT 4056040 yaiT Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 390251 D 511145 CDS NP_414906.1 16128357 945036 complement(391739..392605) 1 NC_000913.3 IS3 transposase B 392605 insF1 945036 insF1 Escherichia coli str. K-12 substr. MG1655 IS3 transposase B NP_414906.1 391739 R 511145 CDS NP_414907.2 226524701 946900 complement(392602..392901) 1 NC_000913.3 IS3 transposase A 392901 insE1 946900 insE1 Escherichia coli str. K-12 substr. MG1655 IS3 transposase A NP_414907.2 392602 R 511145 CDS NP_414909.2 226524702 946902 394506..395129 1 NC_000913.3 putative transcriptional regulator 395129 yaiV 946902 yaiV Escherichia coli str. K-12 substr. MG1655 putative transcriptional regulator NP_414909.2 394506 D 511145 CDS NP_414910.1 16128361 946904 complement(395130..396287) 1 NC_000913.3 D-alanyl-D-alanine- carboxypeptidase/endopeptidase; penicillin-binding protein; weak beta-lactamase 396287 ampH 946904 ampH Escherichia coli str. K-12 substr. MG1655 D-alanyl-D-alanine- carboxypeptidase/endopeptidase; penicillin-binding protein; weak beta-lactamase NP_414910.1 395130 R 511145 CDS NP_414911.1 16128362 946884 396639..397859 1 NC_000913.3 sensitivity to microcin B17, possibly envelop protein; microcin B17 transporter 397859 sbmA 946884 sbmA Escherichia coli str. K-12 substr. MG1655 microcin B17 transporter NP_414911.1 396639 D 511145 CDS NP_414912.1 16128363 945038 397872..398966 1 NC_000913.3 putative lipoprotein 398966 yaiW 945038 yaiW Escherichia coli str. K-12 substr. MG1655 putative lipoprotein NP_414912.1 397872 D 511145 CDS NP_414913.1 16128364 945223 complement(399025..399333) 1 NC_000913.3 DUF2755 family inner membrane protein 399333 yaiY 945223 yaiY Escherichia coli str. K-12 substr. MG1655 DUF2755 family inner membrane protein NP_414913.1 399025 R 511145 CDS NP_414914.2 90111125 947355 399593..399805 1 NC_000913.3 DUF2754 family putative inner membrane protein 399805 yaiZ 947355 yaiZ Escherichia coli str. K-12 substr. MG1655 DUF2754 family putative inner membrane protein NP_414914.2 399593 D 511145 CDS NP_414915.1 16128366 945313 complement(399829..400923) 1 NC_000913.3 D-alanine-D-alanine ligase A 400923 ddlA 945313 ddlA Escherichia coli str. K-12 substr. MG1655 D-alanine-D-alanine ligase A NP_414915.1 399829 R 511145 CDS NP_414916.1 16128367 947709 401386..401646 1 NC_000913.3 anti-RssB factor, RpoS stabilzer during Pi starvation; anti-adapter protein 401646 iraP 947709 iraP Escherichia coli str. K-12 substr. MG1655 anti-RssB factor, RpoS stabilzer during Pi starvation; anti-adapter protein NP_414916.1 401386 D 511145 CDS NP_414917.2 49176017 945041 401747..403162 1 NC_000913.3 alkaline phosphatase; start codon corrected; bacterial alkaline phosphatase 403162 phoA 945041 phoA Escherichia coli str. K-12 substr. MG1655 bacterial alkaline phosphatase NP_414917.2 401747 D 511145 CDS NP_414918.4 162135895 945040 403281..403601 1 NC_000913.3 induced by phosphate starvation; PsiF family protein 403601 psiF 945040 psiF Escherichia coli str. K-12 substr. MG1655 PsiF family protein NP_414918.4 403281 D 511145 CDS NP_414919.1 16128370 945037 403703..404818 1 NC_000913.3 diguanylate cyclase, cellulose regualtor 404818 yaiC 945037 yaiC Escherichia coli str. K-12 substr. MG1655 diguanylate cyclase, cellulose regualtor NP_414919.1 403703 D 511145 CDS NP_414920.1 16128371 945034 complement(404835..405644) 1 NC_000913.3 pyrroline-5-carboxylate reductase; pyrroline-5-carboxylate reductase, NAD(P)-binding 405644 proC 945034 proC Escherichia coli str. K-12 substr. MG1655 pyrroline-5-carboxylate reductase, NAD(P)-binding NP_414920.1 404835 R 511145 CDS NP_414921.2 90111127 945033 405764..406222 1 NC_000913.3 UPF0178 family protein 406222 yaiI 945033 yaiI Escherichia coli str. K-12 substr. MG1655 UPF0178 family protein NP_414921.2 405764 D 511145 CDS NP_414922.1 16128373 945031 406405..406929 1 NC_000913.3 shikimate kinase II 406929 aroL 945031 aroL Escherichia coli str. K-12 substr. MG1655 shikimate kinase II NP_414922.1 406405 D 511145 CDS NP_414923.1 16128374 945043 406979..407170 1 NC_000913.3 OxyR-regulated conserved protein 407170 yaiA 945043 yaiA Escherichia coli str. K-12 substr. MG1655 OxyR-regulated conserved protein NP_414923.1 406979 D 511145 CDS NP_414924.1 16128375 945045 407428..408105 1 NC_000913.3 protein of aro operon, regulated by aroR; AroM family protein 408105 aroM 945045 aroM Escherichia coli str. K-12 substr. MG1655 AroM family protein NP_414924.1 407428 D 511145 CDS NP_414925.1 16128376 945048 408177..408461 1 NC_000913.3 UPF0345 family protein 408461 yaiE 945048 yaiE Escherichia coli str. K-12 substr. MG1655 UPF0345 family protein NP_414925.1 408177 D 511145 CDS b0392 945423 408609..408950 1 NC_000913.3 pseudogene; <NULL_VALUE> 408950 ykiA 945423 ykiA Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 408609 D 511145 CDS NP_414927.1 16128378 948585 complement(409108..410019) 1 NC_000913.3 nucleoid-associated ssDNA and dsDNA binding protein; competitive inhibitor of RecA function 410019 rdgC 948585 rdgC Escherichia coli str. K-12 substr. MG1655 nucleoid-associated ssDNA and dsDNA binding protein; competitive inhibitor of RecA function NP_414927.1 409108 R 511145 CDS NP_414928.2 90111128 949086 410144..411052 1 NC_000913.3 possible NAGC-like transcriptional regulator; manno(fructo)kinase 411052 mak 949086 mak Escherichia coli str. K-12 substr. MG1655 manno(fructo)kinase NP_414928.2 410144 D 511145 CDS NP_414930.3 49176018 949077 complement(411297..412481) 1 NC_000913.3 involved in either transport or processing of arabinose polymers; arabinose-inducible putative transporter, MFS family 412481 araJ 949077 araJ Escherichia coli str. K-12 substr. MG1655 arabinose-inducible putative transporter, MFS family NP_414930.3 411297 R 511145 CDS NP_414931.1 16128382 949076 complement(412607..415753) 1 NC_000913.3 ATP-dependent dsDNA exonuclease; exonuclease, dsDNA, ATP-dependent 415753 sbcC 949076 sbcC Escherichia coli str. K-12 substr. MG1655 exonuclease, dsDNA, ATP-dependent NP_414931.1 412607 R 511145 CDS NP_414932.1 16128383 945049 complement(415750..416952) 1 NC_000913.3 ATP-dependent dsDNA exonuclease; exonuclease, dsDNA, ATP-dependent 416952 sbcD 945049 sbcD Escherichia coli str. K-12 substr. MG1655 exonuclease, dsDNA, ATP-dependent NP_414932.1 415750 R 511145 CDS NP_414933.1 16128384 945046 417142..417831 1 NC_000913.3 positive response regulator for pho regulon, sensor is PhoR (or CreC); response regulator in two-component regulatory system with PhoR (or CreC) 417831 phoB 945046 phoB Escherichia coli str. K-12 substr. MG1655 response regulator in two-component regulatory system with PhoR (or CreC) NP_414933.1 417142 D 511145 CDS NP_414934.1 16128385 945044 417889..419184 1 NC_000913.3 positive and negative sensor protein for pho regulon; sensory histidine kinase in two-component regulatory system with PhoB 419184 phoR 945044 phoR Escherichia coli str. K-12 substr. MG1655 sensory histidine kinase in two-component regulatory system with PhoB NP_414934.1 417889 D 511145 CDS NP_414935.1 16128386 945042 419591..420910 1 NC_000913.3 branched chain amino acid transport system II carrier protein; branched-chain amino acid transport system 2 carrier protein; LIV-II transport system for Ile, Leu, and Val 420910 brnQ 945042 brnQ Escherichia coli str. K-12 substr. MG1655 branched-chain amino acid transport system 2 carrier protein; LIV-II transport system for Ile, Leu, and Val NP_414935.1 419591 D 511145 CDS NP_414936.1 16128387 945050 420986..422359 1 NC_000913.3 proline permease transport protein; proline-specific permease 422359 proY 945050 proY Escherichia coli str. K-12 substr. MG1655 proline-specific permease NP_414936.1 420986 D 511145 CDS NP_414937.2 345452716 949131 422518..424332 1 NC_000913.3 maltodextrin glucosidase 424332 malZ 949131 malZ Escherichia coli str. K-12 substr. MG1655 maltodextrin glucosidase NP_414937.2 422518 D 511145 CDS NP_414938.1 16128389 949132 complement(424337..424918) 1 NC_000913.3 putative glycoprotein; acyl carrier protein (ACP) phosphodiesterase; ACP hydrolyase 424918 acpH 949132 acpH Escherichia coli str. K-12 substr. MG1655 acyl carrier protein (ACP) phosphodiesterase; ACP hydrolyase NP_414938.1 424337 R 511145 CDS NP_414939.1 16128390 944905 425011..426081 1 NC_000913.3 synthesis of queuine in tRNA; probably S-adenosylmethionine:tRNA ribosyltransferase-isomerase; S-adenosylmethionine:tRNA ribosyltransferase-isomerase 426081 queA 944905 queA Escherichia coli str. K-12 substr. MG1655 S-adenosylmethionine:tRNA ribosyltransferase-isomerase NP_414939.1 425011 D 511145 CDS NP_414940.1 16128391 949130 426137..427264 1 NC_000913.3 tRNA-guanine transglycosylase 427264 tgt 949130 tgt Escherichia coli str. K-12 substr. MG1655 tRNA-guanine transglycosylase NP_414940.1 426137 D 511145 CDS NP_414941.1 16128392 945374 427287..427619 1 NC_000913.3 SecYEG protein translocase auxillary subunit 427619 yajC 945374 yajC Escherichia coli str. K-12 substr. MG1655 SecYEG protein translocase auxillary subunit NP_414941.1 427287 D 511145 CDS NP_414942.1 16128393 949133 427647..429494 1 NC_000913.3 protein secretion; membrane protein, part of the channel; SecYEG protein translocase auxillary subunit 429494 secD 949133 secD Escherichia coli str. K-12 substr. MG1655 SecYEG protein translocase auxillary subunit NP_414942.1 427647 D 511145 CDS NP_414943.1 16128394 949120 429505..430476 1 NC_000913.3 protein secretion, membrane protein; SecYEG protein translocase auxillary subunit 430476 secF 949120 secF Escherichia coli str. K-12 substr. MG1655 SecYEG protein translocase auxillary subunit NP_414943.1 429505 D 511145 CDS NP_414944.1 16128395 945051 430605..430952 1 NC_000913.3 HNH nuclease family protein 430952 yajD 945051 yajD Escherichia coli str. K-12 substr. MG1655 HNH nuclease family protein NP_414944.1 430605 D 511145 CDS NP_414945.1 16128396 946242 complement(431129..432013) 1 NC_000913.3 nucleoside channel; receptor of phage T6 and colicin K; nucleoside channel, receptor of phage T6 and colicin K 432013 tsx 946242 tsx Escherichia coli str. K-12 substr. MG1655 nucleoside channel, receptor of phage T6 and colicin K NP_414945.1 431129 R 511145 CDS NP_414946.4 90111129 947233 complement(432312..432851) 1 NC_000913.3 putative lipoprotein 432851 yajI 947233 yajI Escherichia coli str. K-12 substr. MG1655 putative lipoprotein NP_414946.4 432312 R 511145 CDS NP_414947.1 16128398 947437 433002..433451 1 NC_000913.3 Nrd regulon repressor 433451 nrdR 947437 nrdR Escherichia coli str. K-12 substr. MG1655 Nrd regulon repressor NP_414947.1 433002 D 511145 CDS NP_414948.1 16128399 945620 433455..434558 1 NC_000913.3 fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase 434558 ribD 945620 ribD Escherichia coli str. K-12 substr. MG1655 fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase NP_414948.1 433455 D 511145 CDS NP_414949.1 16128400 946453 434647..435117 1 NC_000913.3 riboflavin synthase, beta chain; riboflavin synthase beta chain 435117 ribE 946453 ribE Escherichia coli str. K-12 substr. MG1655 riboflavin synthase beta chain NP_414949.1 434647 D 511145 CDS NP_414950.1 16128401 945054 435137..435556 1 NC_000913.3 transcription termination; L factor; transcription antitermination protein 435556 nusB 945054 nusB Escherichia coli str. K-12 substr. MG1655 transcription antitermination protein NP_414950.1 435137 D 511145 CDS NP_414951.1 16128402 947387 435634..436611 1 NC_000913.3 thiamine monophosphate kinase 436611 thiL 947387 thiL Escherichia coli str. K-12 substr. MG1655 thiamine monophosphate kinase NP_414951.1 435634 D 511145 CDS NP_414952.1 16128403 947542 436589..437107 1 NC_000913.3 phosphatidylglycerophosphatase; phosphatidylglycerophosphatase A 437107 pgpA 947542 pgpA Escherichia coli str. K-12 substr. MG1655 phosphatidylglycerophosphatase A NP_414952.1 436589 D 511145 CDS NP_414953.2 90111130 946903 complement(437161..438135) 1 NC_000913.3 putative NAD(P)H-dependent xylose reductase; 2-carboxybenzaldehyde reductase 438135 yajO 946903 yajO Escherichia coli str. K-12 substr. MG1655 2-carboxybenzaldehyde reductase NP_414953.2 437161 R 511145 CDS NP_414954.1 16128405 945060 complement(438315..440177) 1 NC_000913.3 1-deoxyxylulose-5-phosphate synthase; flavoprotein; 1-deoxyxylulose-5-phosphate synthase, thiamine triphosphate-binding, FAD-requiring 440177 dxs 945060 dxs Escherichia coli str. K-12 substr. MG1655 1-deoxyxylulose-5-phosphate synthase, thiamine triphosphate-binding, FAD-requiring NP_414954.1 438315 R 511145 CDS NP_414955.1 16128406 945064 complement(440202..441101) 1 NC_000913.3 geranyltranstransferase 441101 ispA 945064 ispA Escherichia coli str. K-12 substr. MG1655 geranyltranstransferase NP_414955.1 440202 R 511145 CDS NP_414956.1 16128407 945069 complement(441101..441343) 1 NC_000913.3 exonuclease VII, small subunit; exonuclease VII small subunit 441343 xseB 945069 xseB Escherichia coli str. K-12 substr. MG1655 exonuclease VII small subunit NP_414956.1 441101 R 511145 CDS NP_414957.1 16128408 945067 441549..442997 1 NC_000913.3 tRNA s(4)U8 sulfurtransferase 442997 thiI 945067 thiI Escherichia coli str. K-12 substr. MG1655 tRNA s(4)U8 sulfurtransferase NP_414957.1 441549 D 511145 CDS NP_414958.4 90111131 945066 complement(443051..443641) 1 NC_000913.3 oxidative-stress-resistance chaperone 443641 yajL 945066 yajL Escherichia coli str. K-12 substr. MG1655 oxidative-stress-resistance chaperone NP_414958.4 443051 R 511145 CDS NP_414959.1 16128410 945065 complement(443604..444515) 1 NC_000913.3 2-dehydropantoate 2-reductase; 2-dehydropantoate reductase, NADPH-specific 444515 panE 945065 panE Escherichia coli str. K-12 substr. MG1655 2-dehydropantoate reductase, NADPH-specific NP_414959.1 443604 R 511145 CDS NP_414960.2 90111132 945063 444683..445174 1 NC_000913.3 phage Phi6 host factor, ATP/GTP binding protein 445174 yajQ 945063 yajQ Escherichia coli str. K-12 substr. MG1655 phage Phi6 host factor, ATP/GTP binding protein NP_414960.2 444683 D 511145 CDS NP_414961.4 90111133 945058 complement(445302..446666) 1 NC_000913.3 putative transport protein; putative transporter 446666 yajR 945058 yajR Escherichia coli str. K-12 substr. MG1655 putative transporter NP_414961.4 445302 R 511145 CDS NP_414962.1 16128413 945073 complement(446815..447705) 1 NC_000913.3 protoheme IX farnesyltransferase (haeme O biosynthesis); protoheme IX farnesyltransferase 447705 cyoE 945073 cyoE Escherichia coli str. K-12 substr. MG1655 protoheme IX farnesyltransferase NP_414962.1 446815 R 511145 CDS NP_414963.1 16128414 944918 complement(447717..448046) 1 NC_000913.3 cytochrome o ubiquinol oxidase subunit IV 448046 cyoD 944918 cyoD Escherichia coli str. K-12 substr. MG1655 cytochrome o ubiquinol oxidase subunit IV NP_414963.1 447717 R 511145 CDS NP_414964.1 16128415 946897 complement(448046..448660) 1 NC_000913.3 cytochrome o ubiquinol oxidase subunit III 448660 cyoC 946897 cyoC Escherichia coli str. K-12 substr. MG1655 cytochrome o ubiquinol oxidase subunit III NP_414964.1 448046 R 511145 CDS NP_414965.1 16128416 945615 complement(448650..450641) 1 NC_000913.3 cytochrome o ubiquinol oxidase subunit I 450641 cyoB 945615 cyoB Escherichia coli str. K-12 substr. MG1655 cytochrome o ubiquinol oxidase subunit I NP_414965.1 448650 R 511145 CDS NP_414966.1 16128417 945080 complement(450663..451610) 1 NC_000913.3 cytochrome o ubiquinol oxidase subunit II 451610 cyoA 945080 cyoA Escherichia coli str. K-12 substr. MG1655 cytochrome o ubiquinol oxidase subunit II NP_414966.1 450663 R 511145 CDS NP_414967.1 16128418 946438 complement(452070..453545) 1 NC_000913.3 regulates beta-lactamase synthesis; muropeptide transporter 453545 ampG 946438 ampG Escherichia coli str. K-12 substr. MG1655 muropeptide transporter NP_414967.1 452070 R 511145 CDS NP_414968.4 90111134 945521 complement(453589..454167) 1 NC_000913.3 putative polymerase/proteinase; putative lipoprotein 454167 yajG 945521 yajG Escherichia coli str. K-12 substr. MG1655 putative lipoprotein NP_414968.4 453589 R 511145 CDS NP_414969.4 90111135 947043 454472..454789 1 NC_000913.3 possible regulator of murein genes; stationary-phase morphogene, transcriptional repressor for mreB; also regulator for dacA, dacC, and ampC 454789 bolA 947043 bolA Escherichia coli str. K-12 substr. MG1655 stationary-phase morphogene, transcriptional repressor for mreB; also regulator for dacA, dacC, and ampC NP_414969.4 454472 D 511145 CDS NP_414970.1 16128421 945081 455133..456431 1 NC_000913.3 trigger factor; a molecular chaperone involved in cell division; peptidyl-prolyl cis/trans isomerase (trigger factor) 456431 tig 945081 tig Escherichia coli str. K-12 substr. MG1655 peptidyl-prolyl cis/trans isomerase (trigger factor) NP_414970.1 455133 D 511145 CDS NP_414971.1 16128422 945082 456677..457300 1 NC_000913.3 ATP-dependent proteolytic subunit of clpA-clpP serine protease, heat shock protein F21.5; proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine proteases 457300 clpP 945082 clpP Escherichia coli str. K-12 substr. MG1655 proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine proteases NP_414971.1 456677 D 511145 CDS NP_414972.1 16128423 945083 457426..458700 1 NC_000913.3 ATP-dependent specificity component of clpP serine protease, chaperone; ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine protease 458700 clpX 945083 clpX Escherichia coli str. K-12 substr. MG1655 ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine protease NP_414972.1 457426 D 511145 CDS NP_414973.1 16128424 945085 458888..461242 1 NC_000913.3 DNA-binding, ATP-dependent protease La; heat shock K-protein; DNA-binding ATP-dependent protease La 461242 lon 945085 lon Escherichia coli str. K-12 substr. MG1655 DNA-binding ATP-dependent protease La NP_414973.1 458888 D 511145 CDS NP_414974.1 16128425 949095 461451..461723 1 NC_000913.3 DNA-binding protein HU-beta, NS1 (HU-1); HU, DNA-binding transcriptional regulator, beta subunit 461723 hupB 949095 hupB Escherichia coli str. K-12 substr. MG1655 HU, DNA-binding transcriptional regulator, beta subunit NP_414974.1 461451 D 511145 CDS NP_414975.1 16128426 946056 461915..463786 1 NC_000913.3 periplasmic folding chaperone, has an inactive PPIase domain 463786 ppiD 946056 ppiD Escherichia coli str. K-12 substr. MG1655 periplasmic folding chaperone, has an inactive PPIase domain NP_414975.1 461915 D 511145 CDS NP_414976.1 16128427 945884 463937..464308 1 NC_000913.3 putative competence-suppressing periplasmic helix-hairpin-helix DNA-binding protein 464308 ybaV 945884 ybaV Escherichia coli str. K-12 substr. MG1655 putative competence-suppressing periplasmic helix-hairpin-helix DNA-binding protein NP_414976.1 463937 D 511145 CDS NP_414977.1 16128428 945812 464402..464800 1 NC_000913.3 long-chain acyl-CoA thioesterase III 464800 fadM 945812 fadM Escherichia coli str. K-12 substr. MG1655 long-chain acyl-CoA thioesterase III NP_414977.1 464402 D 511145 CDS NP_414978.1 16128429 947034 complement(464852..465547) 1 NC_000913.3 7-cyano-7-deazaguanine (preQ0) synthase; queuosine biosynthesis 465547 queC 947034 queC Escherichia coli str. K-12 substr. MG1655 7-cyano-7-deazaguanine (preQ0) synthase; queuosine biosynthesis NP_414978.1 464852 R 511145 CDS NP_414979.1 16128430 949093 complement(465612..467312) 1 NC_000913.3 putative ABC superfamily transporter periplasmic-binding protein 467312 ybaE 949093 ybaE Escherichia coli str. K-12 substr. MG1655 putative ABC superfamily transporter periplasmic-binding protein NP_414979.1 465612 R 511145 CDS NP_414980.2 90111136 945089 467412..468230 1 NC_000913.3 thiamine pyrimidine pyrophosphate hydrolase; HMP-PP phosphatase 468230 cof 945089 cof Escherichia coli str. K-12 substr. MG1655 thiamine pyrimidine pyrophosphate hydrolase; HMP-PP phosphatase NP_414980.2 467412 D 511145 CDS NP_414981.4 90111137 945091 468383..468841 1 NC_000913.3 putative LRP-like transcriptional regulator; putative DNA-binding transcriptional regulator 468841 ybaO 945091 ybaO Escherichia coli str. K-12 substr. MG1655 putative DNA-binding transcriptional regulator NP_414981.4 468383 D 511145 CDS NP_414982.1 16128433 945092 468871..470643 1 NC_000913.3 putative multidrug transporter subunit of ABC superfamily, ATP-binding component 470643 mdlA 945092 mdlA Escherichia coli str. K-12 substr. MG1655 putative multidrug transporter subunit of ABC superfamily, ATP-binding component NP_414982.1 468871 D 511145 CDS NP_414983.1 16128434 945088 470636..472417 1 NC_000913.3 putative multidrug transporter subunit of ABC superfamily, ATP-binding component 472417 mdlB 945088 mdlB Escherichia coli str. K-12 substr. MG1655 putative multidrug transporter subunit of ABC superfamily, ATP-binding component NP_414983.1 470636 D 511145 CDS NP_414984.1 16128435 945087 472598..472936 1 NC_000913.3 nitrogen regulatory protein P-II 2; nitrogen assimilation regulatory protein for GlnL, GlnE, and AmtB 472936 glnK 945087 glnK Escherichia coli str. K-12 substr. MG1655 nitrogen assimilation regulatory protein for GlnL, GlnE, and AmtB NP_414984.1 472598 D 511145 CDS NP_414985.1 16128436 945084 472966..474252 1 NC_000913.3 probable ammonium transporter; ammonium transporter 474252 amtB 945084 amtB Escherichia coli str. K-12 substr. MG1655 ammonium transporter NP_414985.1 472966 D 511145 CDS NP_414986.1 16128437 945074 complement(474301..475161) 1 NC_000913.3 acyl-CoA thioesterase 2 475161 tesB 945074 tesB Escherichia coli str. K-12 substr. MG1655 acyl-CoA thioesterase 2 NP_414986.1 474301 R 511145 CDS NP_414987.3 49176025 945070 475379..475951 1 NC_000913.3 glycoprotein/polysaccharide metabolism; outer membrane lipoprotein 475951 ybaY 945070 ybaY Escherichia coli str. K-12 substr. MG1655 outer membrane lipoprotein NP_414987.3 475379 D 511145 CDS NP_414988.1 16128439 945094 complement(475982..476371) 1 NC_000913.3 excision repair protein, alkyltransferase-like protein ATL 476371 ybaZ 945094 ybaZ Escherichia coli str. K-12 substr. MG1655 excision repair protein, alkyltransferase-like protein ATL NP_414988.1 475982 R 511145 CDS NP_414989.1 16128440 948863 476672..477025 1 NC_000913.3 DUF1428 family protein 477025 ybaA 948863 ybaA Escherichia coli str. K-12 substr. MG1655 DUF1428 family protein NP_414989.1 476672 D 511145 CDS NP_414990.2 90111138 948951 complement(477067..478617) 1 NC_000913.3 putative membrane-anchored cyclic-di-GMP phosphodiesterase 478617 ylaB 948951 ylaB Escherichia coli str. K-12 substr. MG1655 putative membrane-anchored cyclic-di-GMP phosphodiesterase NP_414990.2 477067 R 511145 CDS NP_414991.4 90111139 948876 complement(478781..479251) 1 NC_000913.3 DUF1449 family inner membrane protein 479251 ylaC 948876 ylaC Escherichia coli str. K-12 substr. MG1655 DUF1449 family inner membrane protein NP_414991.4 478781 R 511145 CDS NP_414992.1 16128443 945096 complement(479367..479918) 1 NC_000913.3 maltose O-acetyltransferase 479918 maa 945096 maa Escherichia coli str. K-12 substr. MG1655 maltose O-acetyltransferase NP_414992.1 479367 R 511145 CDS NP_414993.1 16128444 945098 complement(480090..480308) 1 NC_000913.3 haemolysin expression modulating protein; modulator of gene expression, with H-NS 480308 hha 945098 hha Escherichia coli str. K-12 substr. MG1655 modulator of gene expression, with H-NS NP_414993.1 480090 R 511145 CDS NP_414994.1 16128445 945106 complement(480334..480708) 1 NC_000913.3 Hha toxicity attenuator; conjugation-related protein 480708 tomB 945106 tomB Escherichia coli str. K-12 substr. MG1655 Hha toxicity attenuator; conjugation-related protein NP_414994.1 480334 R 511145 CDS NP_414995.1 16128446 945108 complement(481254..484403) 1 NC_000913.3 acridine efflux pump; multidrug efflux system protein 484403 acrB 945108 acrB Escherichia coli str. K-12 substr. MG1655 multidrug efflux system protein NP_414995.1 481254 R 511145 CDS NP_414996.1 16128447 945112 complement(484426..485619) 1 NC_000913.3 acridine efflux pump; multidrug efflux system 485619 acrA 945112 acrA Escherichia coli str. K-12 substr. MG1655 multidrug efflux system NP_414996.1 484426 R 511145 CDS NP_414997.1 16128448 945516 485761..486408 1 NC_000913.3 acrAB operon repressor; transcriptional repressor 486408 acrR 945516 acrR Escherichia coli str. K-12 substr. MG1655 transcriptional repressor NP_414997.1 485761 D 511145 CDS NP_414998.1 16128449 945132 486536..489898 1 NC_000913.3 mechanosensitive channel protein; mechanosensitive channel protein, intermediate conductance, K+ regulated 489898 mscK 945132 mscK Escherichia coli str. K-12 substr. MG1655 mechanosensitive channel protein, intermediate conductance, K+ regulated NP_414998.1 486536 D 511145 CDS NP_414999.1 16128450 945144 complement(490110..490271) 1 NC_000913.3 DUF2496 family protein 490271 ybaM 945144 ybaM Escherichia coli str. K-12 substr. MG1655 DUF2496 family protein NP_414999.1 490110 R 511145 CDS NP_415000.1 16128451 945071 complement(490285..490812) 1 NC_000913.3 primosomal replication protein N'' 490812 priC 945071 priC Escherichia coli str. K-12 substr. MG1655 primosomal replication protein N'' NP_415000.1 490285 R 511145 CDS NP_415001.1 16128452 945558 490882..491259 1 NC_000913.3 putative gene 58; DUF454 family inner membrane protein 491259 ybaN 945558 ybaN Escherichia coli str. K-12 substr. MG1655 DUF454 family inner membrane protein NP_415001.1 490882 D 511145 CDS NP_415002.1 16128453 945113 491412..491963 1 NC_000913.3 adenine phosphoribosyltransferase 491963 apt 945113 apt Escherichia coli str. K-12 substr. MG1655 adenine phosphoribosyltransferase NP_415002.1 491412 D 511145 CDS NP_415003.1 16128454 945105 492092..494023 1 NC_000913.3 DNA polymerase III, tau and gamma subunits; DNA elongation factor III; DNA polymerase III/DNA elongation factor III, tau and gamma subunits 494023 dnaX 945105 dnaX Escherichia coli str. K-12 substr. MG1655 DNA polymerase III/DNA elongation factor III, tau and gamma subunits NP_415003.1 492092 D 511145 CDS NP_415004.1 16128455 945104 494076..494405 1 NC_000913.3 DNA-binding protein, putative nucleoid-associated protein 494405 ybaB 945104 ybaB Escherichia coli str. K-12 substr. MG1655 DNA-binding protein, putative nucleoid-associated protein NP_415004.1 494076 D 511145 CDS NP_415005.1 16128456 945100 494405..495010 1 NC_000913.3 recombination and repair; gap repair protein 495010 recR 945100 recR Escherichia coli str. K-12 substr. MG1655 gap repair protein NP_415005.1 494405 D 511145 CDS NP_415006.1 16128457 945099 495120..496994 1 NC_000913.3 chaperone Hsp90, heat shock protein C 62.5; protein refolding molecular co-chaperone Hsp90, Hsp70-dependent; heat-shock protein; ATPase 496994 htpG 945099 htpG Escherichia coli str. K-12 substr. MG1655 protein refolding molecular co-chaperone Hsp90, Hsp70-dependent; heat-shock protein; ATPase NP_415006.1 495120 D 511145 CDS NP_415007.1 16128458 945097 497175..497819 1 NC_000913.3 adenylate kinase activity; pleiotropic effects on glycerol-3-phosphate acyltransferase activity; adenylate kinase 497819 adk 945097 adk Escherichia coli str. K-12 substr. MG1655 adenylate kinase NP_415007.1 497175 D 511145 CDS NP_415008.1 16128459 947532 498055..499017 1 NC_000913.3 ferrochelatase: final enzyme of heme biosynthesis; ferrochelatase 499017 hemH 947532 hemH Escherichia coli str. K-12 substr. MG1655 ferrochelatase NP_415008.1 498055 D 511145 CDS NP_415009.1 16128460 947514 complement(499014..499973) 1 NC_000913.3 acetyl esterase 499973 aes 947514 aes Escherichia coli str. K-12 substr. MG1655 acetyl esterase NP_415009.1 499014 R 511145 CDS NP_415010.1 16128461 946584 500125..501429 1 NC_000913.3 inosine-guanosine kinase; inosine/guanosine kinase 501429 gsk 946584 gsk Escherichia coli str. K-12 substr. MG1655 inosine/guanosine kinase NP_415010.1 500125 D 511145 CDS NP_415011.1 16128462 946576 complement(501562..503238) 1 NC_000913.3 putative transport protein; inner membrane putative NAD(P)-binding transporter 503238 ybaL 946576 ybaL Escherichia coli str. K-12 substr. MG1655 inner membrane putative NAD(P)-binding transporter NP_415011.1 501562 R 511145 CDS NP_415012.1 16128463 945119 complement(503476..504696) 1 NC_000913.3 fosmidomycin resistance protein; putative fosmidomycin efflux system protein 504696 fsr 945119 fsr Escherichia coli str. K-12 substr. MG1655 putative fosmidomycin efflux system protein NP_415012.1 503476 R 511145 CDS NP_415013.1 16128464 947331 504914..506566 1 NC_000913.3 UDP-sugar hydrolase (5'-nucleotidase); bifunctional UDP-sugar hydrolase/5'-nucleotidase 506566 ushA 947331 ushA Escherichia coli str. K-12 substr. MG1655 bifunctional UDP-sugar hydrolase/5'-nucleotidase NP_415013.1 504914 D 511145 CDS NP_415014.1 16128465 947083 complement(506603..507082) 1 NC_000913.3 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase 507082 ybaK 947083 ybaK Escherichia coli str. K-12 substr. MG1655 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase NP_415014.1 506603 R 511145 CDS NP_415015.1 16128466 945124 complement(507286..508080) 1 NC_000913.3 putative ligase; TraB family protein 508080 ybaP 945124 ybaP Escherichia coli str. K-12 substr. MG1655 TraB family protein NP_415015.1 507286 R 511145 CDS NP_415016.4 90111140 948800 508218..508559 1 NC_000913.3 putative DNA-binding transcriptional regulator 508559 ybaQ 948800 ybaQ Escherichia coli str. K-12 substr. MG1655 putative DNA-binding transcriptional regulator NP_415016.4 508218 D 511145 CDS NP_415017.1 16128468 946106 complement(508875..511379) 1 NC_000913.3 copper transporter 511379 copA 946106 copA Escherichia coli str. K-12 substr. MG1655 copper transporter NP_415017.1 508875 R 511145 CDS NP_415018.1 16128469 946187 511641..512573 1 NC_000913.3 putative glutaminase; glutaminase 1 512573 glsA 946187 glsA Escherichia coli str. K-12 substr. MG1655 glutaminase 1 NP_415018.1 511641 D 511145 CDS NP_415019.1 16128470 945363 512576..513868 1 NC_000913.3 putative amino acid/amine transport protein; putative amino acid transporter 513868 ybaT 945363 ybaT Escherichia coli str. K-12 substr. MG1655 putative amino acid transporter NP_415019.1 512576 D 511145 CDS NP_415020.1 16128471 945332 513993..514400 1 NC_000913.3 copper-responsive regulon transcriptional regulator 514400 cueR 945332 cueR Escherichia coli str. K-12 substr. MG1655 copper-responsive regulon transcriptional regulator NP_415020.1 513993 D 511145 CDS NP_415021.2 145698226 945126 complement(514401..514859) 1 NC_000913.3 inner membrane protein that stimulates the ftsH htpX mutant suppressor activity of QmcA 514859 ybbJ 945126 ybbJ Escherichia coli str. K-12 substr. MG1655 inner membrane protein that stimulates the ftsH htpX mutant suppressor activity of QmcA NP_415021.2 514401 R 511145 CDS NP_415022.1 16128473 947257 complement(514856..515773) 1 NC_000913.3 putative protease; PHB domain membrane-anchored putative protease 515773 qmcA 947257 qmcA Escherichia coli str. K-12 substr. MG1655 PHB domain membrane-anchored putative protease NP_415022.1 514856 R 511145 CDS NP_415023.1 16128474 946990 515919..516596 1 NC_000913.3 putative ATP-binding component of a transport system; iron exporter, ATP-binding subunit, ABC transporter FetAB subunit; peroxide resistance protein 516596 fetA 946990 fetA Escherichia coli str. K-12 substr. MG1655 iron exporter, ATP-binding subunit, ABC transporter FetAB subunit; peroxide resistance protein NP_415023.1 515919 D 511145 CDS NP_415024.4 90111141 945137 516583..517362 1 NC_000913.3 putative metal resistance protein; iron exporter permease subunit, ABC transporter FetAB; peroxide resistance protein 517362 fetB 945137 fetB Escherichia coli str. K-12 substr. MG1655 iron exporter permease subunit, ABC transporter FetAB; peroxide resistance protein NP_415024.4 516583 D 511145 CDS NP_415025.4 90111142 947119 complement(517425..518279) 1 NC_000913.3 putative thioredoxin-like protein; DnaK co-chaperone, thioredoxin-like protein 518279 ybbN 947119 ybbN Escherichia coli str. K-12 substr. MG1655 DnaK co-chaperone, thioredoxin-like protein NP_415025.4 517425 R 511145 CDS NP_415026.1 16128477 945337 complement(518340..519149) 1 NC_000913.3 putative oxidoreductase 519149 ybbO 945337 ybbO Escherichia coli str. K-12 substr. MG1655 putative oxidoreductase NP_415026.1 518340 R 511145 CDS NP_415027.1 16128478 945127 complement(519139..519765) 1 NC_000913.3 acyl-CoA thioesterase I; also functions as protease I; multifunctional acyl-CoA thioesterase 1; protease I; lysophospholipase L1 519765 tesA 945127 tesA Escherichia coli str. K-12 substr. MG1655 multifunctional acyl-CoA thioesterase 1; protease I; lysophospholipase L1 NP_415027.1 519139 R 511145 CDS NP_415028.1 16128479 945122 519733..520419 1 NC_000913.3 putative ATP-binding component of a transport system; putative ABC superfamily transporter ATP-binding subunit 520419 ybbA 945122 ybbA Escherichia coli str. K-12 substr. MG1655 putative ABC superfamily transporter ATP-binding subunit NP_415028.1 519733 D 511145 CDS NP_415029.1 16128480 945118 520416..522830 1 NC_000913.3 putative oxidoreductase; putative ABC transporter permease 522830 ybbP 945118 ybbP Escherichia coli str. K-12 substr. MG1655 putative ABC transporter permease NP_415029.1 520416 D 511145 CDS NP_415030.1 16128481 945116 523261..527541 1 NC_000913.3 rhsD protein in rhs element; Rhs family putative polymorphic toxin 527541 rhsD 945116 rhsD Escherichia coli str. K-12 substr. MG1655 Rhs family putative polymorphic toxin NP_415030.1 523261 D 511145 CDS NP_415031.1 16128482 945115 527581..527949 1 NC_000913.3 putative immunity protein 527949 ybbC 945115 ybbC Escherichia coli str. K-12 substr. MG1655 putative immunity protein NP_415031.1 527581 D 511145 CDS b0499 945114 527952..528659 1 NC_000913.3 pseudogene, Rhs familly protein; <NULL_VALUE> 528659 rhsH 945114 rhsH Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 527952 D 511145 CDS b0501 945133 528640..529130 1 NC_000913.3 pseudogene; <NULL_VALUE> 529130 ybbD 945133 ybbD Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 528640 D 511145 CDS b4632 5625558 529500..529592 1 NC_000913.3 pseudogene, Rhs family protein; <NULL_VALUE> 529592 ylbI 5625558 ylbI Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 529500 D 511145 CDS b0502 946803 complement(join(529595..529660,529660..530016)) 1 NC_000913.3 pseudogene, DNA-binding transcriptional regulator homology; <NULL_VALUE> 530016 ylbG 946803 ylbG Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 529595 R 511145 CDS NP_415036.1 16128487 947063 complement(530132..531226) 1 NC_000913.3 putative capsule anchoring protein; tRNA 2-selenouridine synthase, selenophosphate-dependent 531226 mnmH 947063 mnmH Escherichia coli str. K-12 substr. MG1655 tRNA 2-selenouridine synthase, selenophosphate-dependent NP_415036.1 530132 R 511145 CDS NP_415037.1 16128488 945139 complement(531295..532221) 1 NC_000913.3 putative transcriptional regulator LYSR-type; allD operon transcriptional activator 532221 allS 945139 allS Escherichia coli str. K-12 substr. MG1655 allD operon transcriptional activator NP_415037.1 531295 R 511145 CDS NP_415038.1 16128489 945141 532451..532933 1 NC_000913.3 ureidoglycolate lyase, releasing urea 532933 allA 945141 allA Escherichia coli str. K-12 substr. MG1655 ureidoglycolate lyase, releasing urea NP_415038.1 532451 D 511145 CDS NP_415039.1 16128490 945333 533011..533826 1 NC_000913.3 transcriptional repressor of all and gcl operons; glyoxylate-induced 533826 allR 945333 allR Escherichia coli str. K-12 substr. MG1655 transcriptional repressor of all and gcl operons; glyoxylate-induced NP_415039.1 533011 D 511145 CDS NP_415040.1 16128491 945394 533916..535697 1 NC_000913.3 glyoxylate carboligase 535697 gcl 945394 gcl Escherichia coli str. K-12 substr. MG1655 glyoxylate carboligase NP_415040.1 533916 D 511145 CDS NP_415041.1 16128492 946186 535710..536486 1 NC_000913.3 hydroxypyruvate isomerase 536486 hyi 946186 hyi Escherichia coli str. K-12 substr. MG1655 hydroxypyruvate isomerase NP_415041.1 535710 D 511145 CDS NP_415042.1 16128493 945146 536586..537464 1 NC_000913.3 tartronate semialdehyde reductase, NADH-dependent 537464 glxR 945146 glxR Escherichia coli str. K-12 substr. MG1655 tartronate semialdehyde reductase, NADH-dependent NP_415042.1 536586 D 511145 CDS NP_415044.4 90111144 945138 537633..539087 1 NC_000913.3 putative allantoin transporter 539087 ybbW 945138 ybbW Escherichia coli str. K-12 substr. MG1655 putative allantoin transporter NP_415044.4 537633 D 511145 CDS NP_415045.1 16128496 945134 539147..540508 1 NC_000913.3 allantoinase 540508 allB 945134 allB Escherichia coli str. K-12 substr. MG1655 allantoinase NP_415045.1 539147 D 511145 CDS NP_415046.4 90111145 945131 540565..541866 1 NC_000913.3 putative uracil/xanthine transporter 541866 ybbY 945131 ybbY Escherichia coli str. K-12 substr. MG1655 putative uracil/xanthine transporter NP_415046.4 540565 D 511145 CDS NP_415047.1 16128498 945129 541888..543033 1 NC_000913.3 glycerate kinase II 543033 glxK 945129 glxK Escherichia coli str. K-12 substr. MG1655 glycerate kinase II NP_415047.1 541888 D 511145 CDS NP_415048.1 16128499 945149 complement(543261..544046) 1 NC_000913.3 S-ureidoglycine aminohydrolase 544046 allE 945149 allE Escherichia coli str. K-12 substr. MG1655 S-ureidoglycine aminohydrolase NP_415048.1 543261 R 511145 CDS NP_415049.1 16128500 945150 complement(544057..545292) 1 NC_000913.3 allantoate amidohydrolase 545292 allC 945150 allC Escherichia coli str. K-12 substr. MG1655 allantoate amidohydrolase NP_415049.1 544057 R 511145 CDS NP_415050.1 16128501 948342 complement(545314..546363) 1 NC_000913.3 ureidoglycolate dehydrogenase 546363 allD 948342 allD Escherichia coli str. K-12 substr. MG1655 ureidoglycolate dehydrogenase NP_415050.1 545314 R 511145 CDS NP_415051.1 16128502 946298 546680..548347 1 NC_000913.3 involved in protein transport; multicopy suppressor of dominant negative ftsH mutants; putative NAD(P)-binding acyl-CoA synthetase 548347 fdrA 946298 fdrA Escherichia coli str. K-12 substr. MG1655 putative NAD(P)-binding acyl-CoA synthetase NP_415051.1 546680 D 511145 CDS YP_009029994.1 635341461 4056025 548357..549616 1 NC_000913.3 NO-induced DUF1116 protein 549616 ylbE 4056025 ylbE Escherichia coli str. K-12 substr. MG1655 NO-induced DUF1116 protein YP_009029994.1 548357 D 511145 CDS NP_415053.1 16128504 945195 549627..550442 1 NC_000913.3 putative carboxylase; putative anaerobic allantoin catabolic oxamate carbamoyltransferase; DUF2877 family protein 550442 ylbF 945195 ylbF Escherichia coli str. K-12 substr. MG1655 putative anaerobic allantoin catabolic oxamate carbamoyltransferase; DUF2877 family protein NP_415053.1 549627 D 511145 CDS NP_415054.1 16128505 944972 550439..551332 1 NC_000913.3 putative carbamate kinase; putative carbonate kinase 551332 ybcF 944972 ybcF Escherichia coli str. K-12 substr. MG1655 putative carbonate kinase NP_415054.1 550439 D 511145 CDS NP_415055.1 16128506 945153 complement(551527..552594) 1 NC_000913.3 phosphoribosylaminoimidazole carboxylase = AIR carboxylase, CO(2)-fixing subunit; N5-carboxyaminoimidazole ribonucleotide synthase 552594 purK 945153 purK Escherichia coli str. K-12 substr. MG1655 N5-carboxyaminoimidazole ribonucleotide synthase NP_415055.1 551527 R 511145 CDS NP_415056.1 16128507 949031 complement(552591..553100) 1 NC_000913.3 phosphoribosylaminoimidazole carboxylase = AIR carboxylase, catalytic subunit; N5-carboxyaminoimidazole ribonucleotide mutase 553100 purE 949031 purE Escherichia coli str. K-12 substr. MG1655 N5-carboxyaminoimidazole ribonucleotide mutase NP_415056.1 552591 R 511145 CDS NP_415057.1 16128508 949053 complement(553218..553940) 1 NC_000913.3 UDP-2,3-diacylglucosamine pyrophosphohydrolase 553940 lpxH 949053 lpxH Escherichia coli str. K-12 substr. MG1655 UDP-2,3-diacylglucosamine pyrophosphohydrolase NP_415057.1 553218 R 511145 CDS NP_415058.1 16128509 949038 complement(553943..554437) 1 NC_000913.3 peptidyl-prolyl cis-trans isomerase B (rotamase B) 554437 ppiB 949038 ppiB Escherichia coli str. K-12 substr. MG1655 peptidyl-prolyl cis-trans isomerase B (rotamase B) NP_415058.1 553943 R 511145 CDS NP_415059.1 16128510 946969 554611..555996 1 NC_000913.3 cysteine tRNA synthetase; cysteinyl-tRNA synthetase 555996 cysS 946969 cysS Escherichia coli str. K-12 substr. MG1655 cysteinyl-tRNA synthetase NP_415059.1 554611 D 511145 CDS NP_415060.1 16128511 945155 complement(556032..556553) 1 NC_000913.3 DUF457 family inner membrane protein 556553 ybcI 945155 ybcI Escherichia coli str. K-12 substr. MG1655 DUF457 family inner membrane protein NP_415060.1 556032 R 511145 CDS NP_415061.2 90111146 945158 complement(556661..556873) 1 NC_000913.3 ribosome-associated protein; putative RNA-binding protein 556873 ybcJ 945158 ybcJ Escherichia coli str. K-12 substr. MG1655 ribosome-associated protein; putative RNA-binding protein NP_415061.2 556661 R 511145 CDS NP_415062.1 16128513 945221 complement(556875..557741) 1 NC_000913.3 5,10-methylene-tetrahydrofolate dehydrogenase; 5,10-methylene-tetrahydrofolate cyclohydrolase; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 557741 folD 945221 folD Escherichia coli str. K-12 substr. MG1655 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase NP_415062.1 556875 R 511145 CDS NP_415063.4 90111147 945522 558212..558754 1 NC_000913.3 putative fimbrial-like protein; FimA homolog, function unknown 558754 sfmA 945522 sfmA Escherichia coli str. K-12 substr. MG1655 FimA homolog, function unknown NP_415063.4 558212 D 511145 CDS NP_415064.1 16128515 945367 558974..559666 1 NC_000913.3 putative chaperone; putative periplasmic pilus chaperone 559666 sfmC 945367 sfmC Escherichia coli str. K-12 substr. MG1655 putative periplasmic pilus chaperone NP_415064.1 558974 D 511145 CDS NP_415065.1 16128516 945160 559697..562300 1 NC_000913.3 putative outer membrane protein, export function; putative outer membrane export usher protein 562300 sfmD 945160 sfmD Escherichia coli str. K-12 substr. MG1655 putative outer membrane export usher protein NP_415065.1 559697 D 511145 CDS NP_415066.2 145698227 945407 562336..563319 1 NC_000913.3 involved in fimbrial asembly; FimA homolog, function unknown 563319 sfmH 945407 sfmH Escherichia coli str. K-12 substr. MG1655 FimA homolog, function unknown NP_415066.2 562336 D 511145 CDS NP_415067.1 16128518 944977 563330..563845 1 NC_000913.3 putative fimbrial-like protein; FimA homolog, function unknown 563845 sfmF 944977 sfmF Escherichia coli str. K-12 substr. MG1655 FimA homolog, function unknown NP_415067.1 563330 D 511145 CDS NP_415068.1 16128519 947079 complement(563848..564480) 1 NC_000913.3 fimbrial Z protein; probable signal transducer; response regulator family protein 564480 sfmZ 947079 sfmZ Escherichia coli str. K-12 substr. MG1655 response regulator family protein NP_415068.1 563848 R 511145 CDS NP_415069.1 16128520 947162 complement(564815..565978) 1 NC_000913.3 prophage DLP12 integrase; DLP12 prophage; putative phage integrase 565978 intD 947162 intD Escherichia coli str. K-12 substr. MG1655 DLP12 prophage; putative phage integrase NP_415069.1 564815 R 511145 CDS b4633 5625559 complement(565858..566079) 1 NC_000913.3 pseudogene, exisionase in defective prophage DLP12;Phage or Prophage Related; <NULL_VALUE> 566079 xisD 5625559 xisD Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 565858 R 511145 CDS b0539 947902 complement(566098..566376) 1 NC_000913.3 pseudogene, DLP12 prophage; phage-type exonuclease family;Phage or Prophage Related; <NULL_VALUE> 566376 exoD 947902 exoD Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 566098 R 511145 CDS b4508 945299 566376..566687 1 NC_000913.3 pseudogene; DLP12 prophage; replication protein family;Phage or Prophage Related; <NULL_VALUE> 566687 peaD 945299 peaD Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 566376 D 511145 CDS b0542 945024 join(566684..566776,568035..568247) 1 NC_000913.3 pseudogene, DLP12 prophage;Phage or Prophage Related; <NULL_VALUE> 568247 renD 945024 renD Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 566684 D 511145 CDS NP_415072.2 226524703 945759 566842..567141 1 NC_000913.3 IS3 transposase A 567141 insE1 945759 insE1 Escherichia coli str. K-12 substr. MG1655 IS3 transposase A NP_415072.2 566842 D 511145 CDS NP_415073.1 16128524 947988 567138..568004 1 NC_000913.3 IS3 transposase B 568004 insF1 947988 insF1 Escherichia coli str. K-12 substr. MG1655 IS3 transposase B NP_415073.1 567138 D 511145 CDS NP_415075.1 16128526 948442 568315..568647 1 NC_000913.3 methylviologen resistance; DLP12 prophage; multidrug resistance protein 568647 emrE 948442 emrE Escherichia coli str. K-12 substr. MG1655 DLP12 prophage; multidrug resistance protein NP_415075.1 568315 D 511145 CDS NP_415076.1 16128527 945166 568902..570428 1 NC_000913.3 DLP12 prophage; putative recombinase 570428 ybcK 945166 ybcK Escherichia coli str. K-12 substr. MG1655 DLP12 prophage; putative recombinase NP_415076.1 568902 D 511145 CDS NP_415077.1 16128528 945165 570893..571444 1 NC_000913.3 inactive polymorphonuclear leukocyte migration suppressor; DLP12 prophage; secreted protein, UPF0098 family 571444 ybcL 945165 ybcL Escherichia coli str. K-12 substr. MG1655 inactive polymorphonuclear leukocyte migration suppressor; DLP12 prophage; secreted protein, UPF0098 family NP_415077.1 570893 D 511145 CDS NP_415078.1 16128529 945163 571454..572251 1 NC_000913.3 putative ARAC-type regulatory protein; DLP12 prophage; putative DNA-binding transcriptional regulator 572251 ybcM 945163 ybcM Escherichia coli str. K-12 substr. MG1655 DLP12 prophage; putative DNA-binding transcriptional regulator NP_415078.1 571454 D 511145 CDS YP_001165308.1 145698228 5061504 572368..572469 1 NC_000913.3 uncharacterized protein, DLP12 prophage 572469 ylcH 5061504 ylcH Escherichia coli str. K-12 substr. MG1655 uncharacterized protein, DLP12 prophage YP_001165308.1 572368 D 511145 CDS NP_415079.1 16128530 945162 572466..572921 1 NC_000913.3 DLP12 prophage; uncharacterized protein 572921 ybcN 945162 ybcN Escherichia coli str. K-12 substr. MG1655 DLP12 prophage; uncharacterized protein NP_415079.1 572466 D 511145 CDS NP_415080.1 16128531 945151 572921..573091 1 NC_000913.3 similar to phage 82 and lambda proteins; DLP12 prophage; conserved protein 573091 ninE 945151 ninE Escherichia coli str. K-12 substr. MG1655 DLP12 prophage; conserved protein NP_415080.1 572921 D 511145 CDS NP_415081.1 16128532 945147 573084..573374 1 NC_000913.3 DLP12 prophage; uncharacterized protein 573374 ybcO 945147 ybcO Escherichia coli str. K-12 substr. MG1655 DLP12 prophage; uncharacterized protein NP_415081.1 573084 D 511145 CDS NP_415082.1 16128533 945174 573371..573733 1 NC_000913.3 endodeoxyribonuclease RUS (Holliday junction resolvase); DLP12 prophage; endonuclease RUS 573733 rusA 945174 rusA Escherichia coli str. K-12 substr. MG1655 DLP12 prophage; endonuclease RUS NP_415082.1 573371 D 511145 CDS YP_588439.1 94541097 1450240 573730..573870 1 NC_000913.3 uncharacterized protein, DLP12 prophage 573870 ylcG 1450240 ylcG Escherichia coli str. K-12 substr. MG1655 uncharacterized protein, DLP12 prophage YP_588439.1 573730 D 511145 CDS NP_415083.1 16128534 945177 573956..574339 1 NC_000913.3 DLP12 prophage; putative antitermination protein 574339 quuD 945177 quuD Escherichia coli str. K-12 substr. MG1655 DLP12 prophage; putative antitermination protein NP_415083.1 573956 D 511145 CDS b0553 946786 complement(join(574529..574586,575786..576825)) 1 NC_000913.3 DLP12 prophage; truncated outer membrane porin (pseudogene);IS, phage, Tn; Phage or Prophage Related; outer membrane porin protein; locus of qsr prophage; <NULL_VALUE> 576825 nmpC 946786 nmpC Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 574529 R 511145 CDS NP_415084.1 16128535 946163 complement(574737..575753) 1 NC_000913.3 IS5 transposase and trans-activator 575753 insH1 946163 insH1 Escherichia coli str. K-12 substr. MG1655 IS5 transposase and trans-activator NP_415084.1 574737 R 511145 CDS NP_415086.1 16128537 947545 577398..577613 1 NC_000913.3 DLP12 prophage; putative phage lysis protein 577613 essD 947545 essD Escherichia coli str. K-12 substr. MG1655 DLP12 prophage; putative phage lysis protein NP_415086.1 577398 D 511145 CDS NP_415087.1 16128538 947539 577613..578110 1 NC_000913.3 bacteriophage lambda lysozyme homolog; DLP12 prophage; putative lysozyme 578110 rrrD 947539 rrrD Escherichia coli str. K-12 substr. MG1655 DLP12 prophage; putative lysozyme NP_415087.1 577613 D 511145 CDS NP_415088.1 16128539 945929 578107..578568 1 NC_000913.3 bacteriophage lambda endopeptidase homolog; completely contained in another CDS; DLP12 prophage; putative murein endopeptidase 578568 rzpD 945929 rzpD Escherichia coli str. K-12 substr. MG1655 DLP12 prophage; putative murein endopeptidase NP_415088.1 578107 D 511145 CDS YP_588440.1 94541098 1450242 578327..578509 1 NC_000913.3 completely contained in another CDS; DLP12 prophage; putative lipoprotein 578509 rzoD 1450242 rzoD Escherichia coli str. K-12 substr. MG1655 DLP12 prophage; putative lipoprotein YP_588440.1 578327 D 511145 CDS NP_415089.1 16128540 948980 complement(578600..578893) 1 NC_000913.3 bacteriophage lambda Bor protein homolog; DLP12 prophage; putative lipoprotein 578893 borD 948980 borD Escherichia coli str. K-12 substr. MG1655 DLP12 prophage; putative lipoprotein NP_415089.1 578600 R 511145 CDS NP_415090.2 90111149 945178 complement(579184..579594) 1 NC_000913.3 putative an envelop protein; DLP12 prophage; uncharacterized protein 579594 ybcV 945178 ybcV Escherichia coli str. K-12 substr. MG1655 DLP12 prophage; uncharacterized protein NP_415090.2 579184 R 511145 CDS NP_415091.1 16128542 945175 579880..580086 1 NC_000913.3 DLP12 prophage; uncharacterized protein 580086 ybcW 945175 ybcW Escherichia coli str. K-12 substr. MG1655 DLP12 prophage; uncharacterized protein NP_415091.1 579880 D 511145 CDS YP_001165309.1 145698229 5061499 complement(580251..580445) 1 NC_000913.3 DUF3950 family protein, DLP12 prophage 580445 ylcI 5061499 ylcI Escherichia coli str. K-12 substr. MG1655 DUF3950 family protein, DLP12 prophage YP_001165309.1 580251 R 511145 CDS NP_415092.1 16128543 945172 580834..581379 1 NC_000913.3 bacteriophage DNA packaging protein; DLP12 prophage; DNA packaging protein 581379 nohD 945172 nohD Escherichia coli str. K-12 substr. MG1655 DLP12 prophage; DNA packaging protein NP_415092.1 580834 D 511145 CDS b4634 5625560 581354..581662 1 NC_000913.3 pseudogene; DLP12 prophage; tail fiber assembly protein family;Phage or Prophage Related; <NULL_VALUE> 581662 aaaD 5625560 aaaD Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 581354 D 511145 CDS b0561 945171 581660..582097 1 NC_000913.3 pseudogene, DLP12 prophage; tail fiber assembly protein family;Phage or Prophage Related; <NULL_VALUE> 582097 tfaD 945171 tfaD Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 581660 D 511145 CDS b0562 945170 complement(join(582152..582804,582803..582806)) 1 NC_000913.3 pseudogene, DLP12 prophage; methyltransferase homology;Phage or Prophage Related; <NULL_VALUE> 582806 ybcY 945170 ybcY Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 582152 R 511145 CDS b0563 945183 582953..583135 1 NC_000913.3 pseudogene, DLP12 prophage;Phage or Prophage Related; <NULL_VALUE> 583135 tfaX 945183 tfaX Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 582953 D 511145 CDS NP_415096.1 16128547 948797 583681..584430 1 NC_000913.3 regulatory protein affecting appA and other genes; global transcriptional activator; DLP12 prophage 584430 appY 948797 appY Escherichia coli str. K-12 substr. MG1655 global transcriptional activator; DLP12 prophage NP_415096.1 583681 D 511145 CDS NP_415097.1 16128548 945185 complement(584680..585633) 1 NC_000913.3 outer membrane protein 3b (a), protease VII; DLP12 prophage; outer membrane protease VII (outer membrane protein 3b) 585633 ompT 945185 ompT Escherichia coli str. K-12 substr. MG1655 DLP12 prophage; outer membrane protease VII (outer membrane protein 3b) NP_415097.1 584680 R 511145 CDS NP_415098.1 16128549 949114 complement(586147..586908) 1 NC_000913.3 envelope protein; thermoregulation of porin biosynthesis; porin thermoregulatory transcriptional activator 586908 envY 949114 envY Escherichia coli str. K-12 substr. MG1655 porin thermoregulatory transcriptional activator NP_415098.1 586147 R 511145 CDS NP_415099.1 16128550 945186 complement(587091..587981) 1 NC_000913.3 PRK09936 family protein 587981 ybcH 945186 ybcH Escherichia coli str. K-12 substr. MG1655 PRK09936 family protein NP_415099.1 587091 R 511145 CDS NP_415100.1 16128551 944741 complement(587982..590954) 1 NC_000913.3 bacteriophage N4 receptor, outer membrane protein; bacteriophage N4 receptor, outer membrane subunit 590954 nfrA 944741 nfrA Escherichia coli str. K-12 substr. MG1655 bacteriophage N4 receptor, outer membrane subunit NP_415100.1 587982 R 511145 CDS NP_415101.1 16128552 945849 complement(590941..593178) 1 NC_000913.3 bacteriophage N4 receptor, subunit, inner membrane protein; bacteriophage N4 receptor, inner membrane subunit 593178 nfrB 945849 nfrB Escherichia coli str. K-12 substr. MG1655 bacteriophage N4 receptor, inner membrane subunit NP_415101.1 590941 R 511145 CDS NP_415102.1 16128553 945978 complement(593328..594770) 1 NC_000913.3 sensory histidine kinase in two-component regulatory system with CusR, senses copper ions 594770 cusS 945978 cusS Escherichia coli str. K-12 substr. MG1655 sensory histidine kinase in two-component regulatory system with CusR, senses copper ions NP_415102.1 593328 R 511145 CDS NP_415103.1 16128554 945003 complement(594760..595443) 1 NC_000913.3 response regulator in two-component regulatory system with CusS 595443 cusR 945003 cusR Escherichia coli str. K-12 substr. MG1655 response regulator in two-component regulatory system with CusS NP_415103.1 594760 R 511145 CDS NP_415104.1 16128555 946288 595600..596973 1 NC_000913.3 copper/silver efflux system, outer membrane component 596973 cusC 946288 cusC Escherichia coli str. K-12 substr. MG1655 copper/silver efflux system, outer membrane component NP_415104.1 595600 D 511145 CDS NP_415105.1 16128556 945188 597131..597463 1 NC_000913.3 periplasmic copper- and silver-binding protein 597463 cusF 945188 cusF Escherichia coli str. K-12 substr. MG1655 periplasmic copper- and silver-binding protein NP_415105.1 597131 D 511145 CDS NP_415106.1 16128557 945189 597479..598702 1 NC_000913.3 copper/silver efflux system, membrane fusion protein 598702 cusB 945189 cusB Escherichia coli str. K-12 substr. MG1655 copper/silver efflux system, membrane fusion protein NP_415106.1 597479 D 511145 CDS NP_415107.1 16128558 945191 598714..601857 1 NC_000913.3 copper/silver efflux system, membrane component 601857 cusA 945191 cusA Escherichia coli str. K-12 substr. MG1655 copper/silver efflux system, membrane component NP_415107.1 598714 D 511145 CDS NP_415108.1 16128559 945199 601959..603335 1 NC_000913.3 phenylalanine-specific transport system; phenylalanine transporter 603335 pheP 945199 pheP Escherichia coli str. K-12 substr. MG1655 phenylalanine transporter NP_415108.1 601959 D 511145 CDS NP_415109.1 16128560 946243 complement(603416..604663) 1 NC_000913.3 putative transport; mechanosensitive channel protein, miniconductance 604663 ybdG 946243 ybdG Escherichia coli str. K-12 substr. MG1655 mechanosensitive channel protein, miniconductance NP_415109.1 603416 R 511145 CDS NP_415110.1 16128561 945778 complement(604771..605424) 1 NC_000913.3 oxygen-insensitive NAD(P)H nitroreductase; dihydropteridine reductase, NAD(P)H-dependent, oxygen-insensitive 605424 nfsB 945778 nfsB Escherichia coli str. K-12 substr. MG1655 dihydropteridine reductase, NAD(P)H-dependent, oxygen-insensitive NP_415110.1 604771 R 511145 CDS NP_415111.1 16128562 948302 complement(605518..605886) 1 NC_000913.3 DUF419 family protein 605886 ybdF 948302 ybdF Escherichia coli str. K-12 substr. MG1655 DUF419 family protein NP_415111.1 605518 R 511145 CDS NP_415112.1 16128563 947183 complement(605951..606199) 1 NC_000913.3 DUF1158 family putative inner membrane protein 606199 ybdJ 947183 ybdJ Escherichia coli str. K-12 substr. MG1655 DUF1158 family putative inner membrane protein NP_415112.1 605951 R 511145 CDS NP_415113.1 16128564 947246 complement(606265..607383) 1 NC_000913.3 weak gamma-glutamyl:cysteine ligase 607383 ybdK 947246 ybdK Escherichia coli str. K-12 substr. MG1655 weak gamma-glutamyl:cysteine ligase NP_415113.1 606265 R 511145 CDS YP_025295.1 49176035 2847715 607836..607988 1 NC_000913.3 small toxic membrane polypeptide; the corresponding mokE lacks a start codon, and the regulatory RNA sokE has not been identified; toxic polypeptide, small 607988 hokE 2847715 hokE Escherichia coli str. K-12 substr. MG1655 toxic polypeptide, small YP_025295.1 607836 D 511145 CDS NP_415114.1 16128565 945200 608065..609177 1 NC_000913.3 IS186 transposase 609177 insL1 945200 insL1 Escherichia coli str. K-12 substr. MG1655 IS186 transposase NP_415114.1 608065 D 511145 CDS NP_415115.2 345452717 945194 complement(609459..610079) 1 NC_000913.3 enterochelin synthetase, component D; phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex 610079 entD 945194 entD Escherichia coli str. K-12 substr. MG1655 phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex NP_415115.2 609459 R 511145 CDS NP_415116.1 16128567 945193 complement(610254..612494) 1 NC_000913.3 outer membrane receptor for ferric enterobactin (enterochelin) and colicins B and D; iron-enterobactin outer membrane transporter 612494 fepA 945193 fepA Escherichia coli str. K-12 substr. MG1655 iron-enterobactin outer membrane transporter NP_415116.1 610254 R 511145 CDS NP_415117.2 635341462 945181 612737..613939 1 NC_000913.3 enterochelin esterase; enterobactin/ferric enterobactin esterase 613939 fes 945181 fes Escherichia coli str. K-12 substr. MG1655 enterobactin/ferric enterobactin esterase NP_415117.2 612737 D 511145 CDS YP_588441.1 94541099 1450243 613942..614160 1 NC_000913.3 stimulator of EntF adenylation activity, MbtH-like 614160 ybdZ 1450243 ybdZ Escherichia coli str. K-12 substr. MG1655 stimulator of EntF adenylation activity, MbtH-like YP_588441.1 613942 D 511145 CDS NP_415118.1 16128569 945184 614157..618038 1 NC_000913.3 ATP-dependent serine activating enzyme (may be part of enterobactin synthase as component F); enterobactin synthase multienzyme complex component, ATP-dependent 618038 entF 945184 entF Escherichia coli str. K-12 substr. MG1655 enterobactin synthase multienzyme complex component, ATP-dependent NP_415118.1 614157 D 511145 CDS NP_415119.1 16128570 945180 618254..619387 1 NC_000913.3 ferric enterobactin (enterochelin) transport; regulator of length of O-antigen component of lipopolysaccharide chains 619387 fepE 945180 fepE Escherichia coli str. K-12 substr. MG1655 regulator of length of O-antigen component of lipopolysaccharide chains NP_415119.1 618254 D 511145 CDS NP_415120.1 16128571 945201 complement(619384..620199) 1 NC_000913.3 ATP-binding component of ferric enterobactin transport; iron-enterobactin transporter subunit 620199 fepC 945201 fepC Escherichia coli str. K-12 substr. MG1655 iron-enterobactin transporter subunit NP_415120.1 619384 R 511145 CDS NP_415121.1 16128572 945209 complement(620196..621188) 1 NC_000913.3 ferric enterobactin transport protein; membrane component of ABC superfamily; iron-enterobactin transporter subunit 621188 fepG 945209 fepG Escherichia coli str. K-12 substr. MG1655 iron-enterobactin transporter subunit NP_415121.1 620196 R 511145 CDS NP_415122.1 16128573 945214 complement(621185..622189) 1 NC_000913.3 ferric enterobactin (enterochelin) transport; membrane component of ABC superfamily; iron-enterobactin transporter subunit 622189 fepD 945214 fepD Escherichia coli str. K-12 substr. MG1655 iron-enterobactin transporter subunit NP_415122.1 621185 R 511145 CDS NP_415123.1 16128574 946268 622300..623550 1 NC_000913.3 putative transport; enterobactin exporter, iron-regulated 623550 entS 946268 entS Escherichia coli str. K-12 substr. MG1655 enterobactin exporter, iron-regulated NP_415123.1 622300 D 511145 CDS NP_415124.1 16128575 947538 complement(623554..624510) 1 NC_000913.3 ferric enterobactin (enterochelin) binding protein; periplasmic component; periplasmic-binding component of ABC superfamily; iron-enterobactin transporter subunit 624510 fepB 947538 fepB Escherichia coli str. K-12 substr. MG1655 iron-enterobactin transporter subunit NP_415124.1 623554 R 511145 CDS NP_415125.1 16128576 945511 624885..626060 1 NC_000913.3 isochorismate hydroxymutase 2, enterochelin biosynthesis; isochorismate synthase 1 626060 entC 945511 entC Escherichia coli str. K-12 substr. MG1655 isochorismate synthase 1 NP_415125.1 624885 D 511145 CDS NP_415126.1 16128577 947426 626070..627680 1 NC_000913.3 2,3-dihydroxybenzoate-AMP ligase; 2,3-dihydroxybenzoate-AMP ligase component of enterobactin synthase multienzyme complex 627680 entE 947426 entE Escherichia coli str. K-12 substr. MG1655 2,3-dihydroxybenzoate-AMP ligase component of enterobactin synthase multienzyme complex NP_415126.1 626070 D 511145 CDS NP_415127.1 16128578 946178 627694..628551 1 NC_000913.3 2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochroismatase; isochorismatase 628551 entB 946178 entB Escherichia coli str. K-12 substr. MG1655 isochorismatase NP_415127.1 627694 D 511145 CDS NP_415128.1 16128579 945284 628551..629297 1 NC_000913.3 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase, enterochelin biosynthesis; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase 629297 entA 945284 entA Escherichia coli str. K-12 substr. MG1655 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase NP_415128.1 628551 D 511145 CDS NP_415129.1 16128580 945215 629300..629713 1 NC_000913.3 enterobactin synthesis proofreading thioesterase 629713 entH 945215 entH Escherichia coli str. K-12 substr. MG1655 enterobactin synthesis proofreading thioesterase NP_415129.1 629300 D 511145 CDS NP_415130.1 16128581 945213 629894..631999 1 NC_000913.3 carbon starvation protein involved in peptide utilization; APC peptide transporter family protein 631999 cstA 945213 cstA Escherichia coli str. K-12 substr. MG1655 carbon starvation protein involved in peptide utilization; APC peptide transporter family protein NP_415130.1 629894 D 511145 CDS YP_588442.1 94541100 949021 632182..632379 1 NC_000913.3 DUF466 family protein 632379 ybdD 949021 ybdD Escherichia coli str. K-12 substr. MG1655 DUF466 family protein YP_588442.1 632182 D 511145 CDS NP_415132.1 16128582 945212 complement(632389..633477) 1 NC_000913.3 putative oxidoreductase 633477 ybdH 945212 ybdH Escherichia coli str. K-12 substr. MG1655 putative oxidoreductase NP_415132.1 632389 R 511145 CDS NP_415133.1 16128583 945211 633586..634746 1 NC_000913.3 PLP-dependent methionine aminotransferase; methionine aminotransferase, PLP-dependent 634746 ybdL 945211 ybdL Escherichia coli str. K-12 substr. MG1655 methionine aminotransferase, PLP-dependent NP_415133.1 633586 D 511145 CDS NP_415134.1 16128584 945206 complement(634747..635376) 1 NC_000913.3 Spo0J family protein, ParB-like nuclease domain 635376 ybdM 945206 ybdM Escherichia coli str. K-12 substr. MG1655 Spo0J family protein, ParB-like nuclease domain NP_415134.1 634747 R 511145 CDS NP_415135.1 16128585 945205 complement(635349..636569) 1 NC_000913.3 PAPS reductase-like domain protein 636569 ybdN 945205 ybdN Escherichia coli str. K-12 substr. MG1655 PAPS reductase-like domain protein NP_415135.1 635349 R 511145 CDS NP_415136.1 16128586 945216 complement(636716..637618) 1 NC_000913.3 putative transcriptional regulator LYSR-type; putative DNA-binding transcriptional regulator 637618 ybdO 945216 ybdO Escherichia coli str. K-12 substr. MG1655 putative DNA-binding transcriptional regulator NP_415136.1 636716 R 511145 CDS NP_415137.2 90111151 945224 complement(637827..638573) 1 NC_000913.3 thiol:disulfide interchange protein; thiol:disulfide interchange protein, periplasmic 638573 dsbG 945224 dsbG Escherichia coli str. K-12 substr. MG1655 thiol:disulfide interchange protein, periplasmic NP_415137.2 637827 R 511145 CDS NP_415138.1 16128588 945225 638945..639508 1 NC_000913.3 alkyl hydroperoxide reductase, C22 subunit; detoxification of hydroperoxides; alkyl hydroperoxide reductase, C22 subunit 639508 ahpC 945225 ahpC Escherichia coli str. K-12 substr. MG1655 alkyl hydroperoxide reductase, C22 subunit NP_415138.1 638945 D 511145 CDS NP_415139.2 90111152 947540 639753..641318 1 NC_000913.3 alkyl hydroperoxide reductase, F52a subunit; detoxification of hydroperoxides; alkyl hydroperoxide reductase, F52a subunit, FAD/NAD(P)-binding 641318 ahpF 947540 ahpF Escherichia coli str. K-12 substr. MG1655 alkyl hydroperoxide reductase, F52a subunit, FAD/NAD(P)-binding NP_415139.2 639753 D 511145 CDS NP_415140.1 16128590 945229 complement(641439..641867) 1 NC_000913.3 universal stress protein UP12 641867 uspG 945229 uspG Escherichia coli str. K-12 substr. MG1655 universal stress protein UP12 NP_415140.1 641439 R 511145 CDS NP_415141.1 16128591 949067 642088..643326 1 NC_000913.3 putative oxidoreductase; putative Zn-dependent NAD(P)-binding oxidoreductase 643326 ybdR 949067 ybdR Escherichia coli str. K-12 substr. MG1655 putative Zn-dependent NAD(P)-binding oxidoreductase NP_415141.1 642088 D 511145 CDS NP_415143.1 16128593 947546 complement(643557..643967) 1 NC_000913.3 regulator of nucleoside diphosphate kinase 643967 rnk 947546 rnk Escherichia coli str. K-12 substr. MG1655 regulator of nucleoside diphosphate kinase NP_415143.1 643557 R 511145 CDS NP_415144.1 16128594 949065 complement(644197..645003) 1 NC_000913.3 RNase I, cleaves phosphodiester bond between any two nucleotides; ribonuclease I 645003 rna 949065 rna Escherichia coli str. K-12 substr. MG1655 ribonuclease I NP_415144.1 644197 R 511145 CDS NP_415145.1 16128595 949070 complement(645117..646580) 1 NC_000913.3 citrate:succinate antiporter 646580 citT 949070 citT Escherichia coli str. K-12 substr. MG1655 citrate:succinate antiporter NP_415145.1 645117 R 511145 CDS NP_415146.1 16128596 946395 complement(646631..647509) 1 NC_000913.3 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase 647509 citG 946395 citG Escherichia coli str. K-12 substr. MG1655 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase NP_415146.1 646631 R 511145 CDS NP_415147.1 16128597 949084 complement(647484..648035) 1 NC_000913.3 apo-citrate lyase phosphoribosyl-dephospho-CoA transferase 648035 citX 949084 citX Escherichia coli str. K-12 substr. MG1655 apo-citrate lyase phosphoribosyl-dephospho-CoA transferase NP_415147.1 647484 R 511145 CDS NP_415148.1 16128598 945230 complement(648039..649571) 1 NC_000913.3 citrate lyase alpha chain; citrate lyase, citrate-ACP transferase (alpha) subunit 649571 citF 945230 citF Escherichia coli str. K-12 substr. MG1655 citrate lyase, citrate-ACP transferase (alpha) subunit NP_415148.1 648039 R 511145 CDS NP_415149.4 90111153 945406 complement(649582..650490) 1 NC_000913.3 citrate lyase, citryl-ACP lyase (beta) subunit 650490 citE 945406 citE Escherichia coli str. K-12 substr. MG1655 citrate lyase, citryl-ACP lyase (beta) subunit NP_415149.4 649582 R 511145 CDS NP_415150.1 16128600 945415 complement(650487..650783) 1 NC_000913.3 citrate lyase acyl carrier protein (gamma chain); citrate lyase, acyl carrier (gamma) subunit 650783 citD 945415 citD Escherichia coli str. K-12 substr. MG1655 citrate lyase, acyl carrier (gamma) subunit NP_415150.1 650487 R 511145 CDS NP_415151.4 90111154 945231 complement(650798..651856) 1 NC_000913.3 citrate lyase synthetase (citrate (pro-3S)-lyase ligase; [citrate [pro-3S]-lyase] ligase 651856 citC 945231 citC Escherichia coli str. K-12 substr. MG1655 [citrate [pro-3S]-lyase] ligase NP_415151.4 650798 R 511145 CDS NP_415152.1 16128602 945233 652235..653893 1 NC_000913.3 putative sensor-type protein; sensory histidine kinase in two-component regulatory system with CitB 653893 citA 945233 citA Escherichia coli str. K-12 substr. MG1655 sensory histidine kinase in two-component regulatory system with CitB NP_415152.1 652235 D 511145 CDS NP_415153.1 16128603 947008 653862..654542 1 NC_000913.3 sequence similarity to Shigella regulator; response regulator in two-component regulatory system with CitA 654542 citB 947008 citB Escherichia coli str. K-12 substr. MG1655 response regulator in two-component regulatory system with CitA NP_415153.1 653862 D 511145 CDS NP_415154.1 16128604 945000 complement(654583..655968) 1 NC_000913.3 transport of dicarboxylates; anaerobic C4-dicarboxylate transport 655968 dcuC 945000 dcuC Escherichia coli str. K-12 substr. MG1655 anaerobic C4-dicarboxylate transport NP_415154.1 654583 R 511145 CDS NP_415155.1 16128605 946360 656557..657117 1 NC_000913.3 phospholipid:lipid A palmitoyltransferase 657117 pagP 946360 pagP Escherichia coli str. K-12 substr. MG1655 phospholipid:lipid A palmitoyltransferase NP_415155.1 656557 D 511145 CDS NP_415156.1 16128606 947024 657292..657501 1 NC_000913.3 cold shock protein; constitutive cold shock family transcription antitermination protein; negative regulator of cspA transcription; RNA melting protein; ssDNA-binding protein 657501 cspE 947024 cspE Escherichia coli str. K-12 substr. MG1655 constitutive cold shock family transcription antitermination protein; negative regulator of cspA transcription; RNA melting protein; ssDNA-binding protein NP_415156.1 657292 D 511145 CDS NP_415157.1 16128607 945798 complement(657555..657938) 1 NC_000913.3 fluoride efflux channel, dual topology membrane protein 657938 flc 945798 flc Escherichia coli str. K-12 substr. MG1655 fluoride efflux channel, dual topology membrane protein NP_415157.1 657555 R 511145 CDS b4581 4056041 join(658031..658225,658225..658818) 1 NC_000913.3 pseudogene, C-N hydrolase superfamily homology;putative enzyme; Not classified; putative amidase; <NULL_VALUE> 658818 ybeM 4056041 ybeM Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 658031 D 511145 CDS NP_415160.1 16128610 945228 658947..659150 1 NC_000913.3 TatABCE protein translocation system subunit 659150 tatE 945228 tatE Escherichia coli str. K-12 substr. MG1655 TatABCE protein translocation system subunit NP_415160.1 658947 D 511145 CDS NP_415161.1 16128611 945227 complement(659251..660216) 1 NC_000913.3 lipoate synthesis, sulfur insertion?; lipoate synthase 660216 lipA 945227 lipA Escherichia coli str. K-12 substr. MG1655 lipoate synthase NP_415161.1 659251 R 511145 CDS NP_415162.4 90111155 945219 complement(660425..661378) 1 NC_000913.3 putative transcriptional regulator LYSR-type; LysR family putative transcriptional regulator 661378 ybeF 945219 ybeF Escherichia coli str. K-12 substr. MG1655 LysR family putative transcriptional regulator NP_415162.4 660425 R 511145 CDS NP_415163.2 90111156 945217 complement(661637..662278) 1 NC_000913.3 protein of lipoate biosynthesis; octanoyltransferase; octanoyl-[ACP]:protein N-octanoyltransferase 662278 lipB 945217 lipB Escherichia coli str. K-12 substr. MG1655 octanoyltransferase; octanoyl-[ACP]:protein N-octanoyltransferase NP_415163.2 661637 R 511145 CDS NP_415164.1 16128614 945220 complement(662379..662642) 1 NC_000913.3 UPF0250 family protein 662642 ybeD 945220 ybeD Escherichia coli str. K-12 substr. MG1655 UPF0250 family protein NP_415164.1 662379 R 511145 CDS NP_415165.1 16128615 945222 complement(662752..663963) 1 NC_000913.3 D-alanyl-D-alanine carboxypeptidase, fraction A; penicillin-binding protein 5; D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) 663963 dacA 945222 dacA Escherichia coli str. K-12 substr. MG1655 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) NP_415165.1 662752 R 511145 CDS NP_415166.1 16128616 945241 complement(664102..665190) 1 NC_000913.3 a minor lipoprotein; septal ring protein, suppressor of prc, minor lipoprotein 665190 rlpA 945241 rlpA Escherichia coli str. K-12 substr. MG1655 septal ring protein, suppressor of prc, minor lipoprotein NP_415166.1 664102 R 511145 CDS NP_415167.1 16128617 945238 complement(665201..666313) 1 NC_000913.3 rod shape-determining membrane protein; sensitivity to radiation and drugs; cell wall shape-determining protein 666313 mrdB 945238 mrdB Escherichia coli str. K-12 substr. MG1655 cell wall shape-determining protein NP_415167.1 665201 R 511145 CDS NP_415168.1 16128618 945240 complement(666316..668217) 1 NC_000913.3 cell elongation, e phase; peptidoglycan synthetase; penicillin-binding protein 2; transpeptidase involved in peptidoglycan synthesis (penicillin-binding protein 2) 668217 mrdA 945240 mrdA Escherichia coli str. K-12 substr. MG1655 transpeptidase involved in peptidoglycan synthesis (penicillin-binding protein 2) NP_415168.1 666316 R 511145 CDS NP_415169.1 16128619 945239 complement(668248..668715) 1 NC_000913.3 23S rRNA m(3)Psi1915 pseudouridine methyltransferase, SAM-dependent 668715 rlmH 945239 rlmH Escherichia coli str. K-12 substr. MG1655 23S rRNA m(3)Psi1915 pseudouridine methyltransferase, SAM-dependent NP_415169.1 668248 R 511145 CDS NP_415170.4 90111157 945237 complement(668719..669036) 1 NC_000913.3 ribosomal silencing factor 669036 rsfS 945237 rsfS Escherichia coli str. K-12 substr. MG1655 ribosomal silencing factor NP_415170.4 668719 R 511145 CDS NP_415171.1 16128621 945246 complement(669296..669907) 1 NC_000913.3 homolog of Salmonella cobC, a phosphohistidine protein; putative alpha-ribazole-5'-P phosphatase 669907 cobC 945246 cobC Escherichia coli str. K-12 substr. MG1655 putative alpha-ribazole-5'-P phosphatase NP_415171.1 669296 R 511145 CDS NP_415172.1 16128622 945248 complement(669931..670572) 1 NC_000913.3 nicotinic acid mononucleotide adenylyltransferase, NAD(P)-dependent 670572 nadD 945248 nadD Escherichia coli str. K-12 substr. MG1655 nicotinic acid mononucleotide adenylyltransferase, NAD(P)-dependent NP_415172.1 669931 R 511145 CDS NP_415173.1 16128623 947573 complement(670574..671605) 1 NC_000913.3 DNA polymerase III, delta subunit 671605 holA 947573 holA Escherichia coli str. K-12 substr. MG1655 DNA polymerase III, delta subunit NP_415173.1 670574 R 511145 CDS NP_415174.1 16128624 946257 complement(671605..672186) 1 NC_000913.3 a minor lipoprotein; LPS assembly OM complex LptDE, lipoprotein component 672186 lptE 946257 lptE Escherichia coli str. K-12 substr. MG1655 LPS assembly OM complex LptDE, lipoprotein component NP_415174.1 671605 R 511145 CDS NP_415175.1 16128625 947497 complement(672201..674783) 1 NC_000913.3 leucine tRNA synthetase; leucyl-tRNA synthetase 674783 leuS 947497 leuS Escherichia coli str. K-12 substr. MG1655 leucyl-tRNA synthetase NP_415175.1 672201 R 511145 CDS NP_415176.1 16128626 945252 675018..675500 1 NC_000913.3 putative alpha helical protein; DUF1451 family protein 675500 ybeL 945252 ybeL Escherichia coli str. K-12 substr. MG1655 DUF1451 family protein NP_415176.1 675018 D 511145 CDS NP_415177.4 90111158 945251 complement(675570..676547) 1 NC_000913.3 Sel1 family TPR-like repeat protein 676547 ybeQ 945251 ybeQ Escherichia coli str. K-12 substr. MG1655 Sel1 family TPR-like repeat protein NP_415177.4 675570 R 511145 CDS NP_415178.1 16128628 945249 676711..677418 1 NC_000913.3 uncharacterized protein 677418 ybeR 945249 ybeR Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_415178.1 676711 D 511145 CDS NP_415179.1 16128629 945245 677415..678842 1 NC_000913.3 putative enzyme of polynucleotide modification; putative HscC co-chaperone, uncharacterized J domain-containing protein 678842 djlB 945245 djlB Escherichia coli str. K-12 substr. MG1655 putative HscC co-chaperone, uncharacterized J domain-containing protein NP_415179.1 677415 D 511145 CDS NP_415180.1 16128630 945243 complement(678852..679406) 1 NC_000913.3 Sel1 family TPR-like repeat protein 679406 ybeT 945243 ybeT Escherichia coli str. K-12 substr. MG1655 Sel1 family TPR-like repeat protein NP_415180.1 678852 R 511145 CDS NP_415181.1 16128631 945244 679508..680215 1 NC_000913.3 putative tRNA ligase; DUF1266 family protein 680215 ybeU 945244 ybeU Escherichia coli str. K-12 substr. MG1655 DUF1266 family protein NP_415181.1 679508 D 511145 CDS NP_415182.1 16128632 945253 680212..681663 1 NC_000913.3 J domain-containing HscC co-chaperone; Hsc56 681663 djlC 945253 djlC Escherichia coli str. K-12 substr. MG1655 J domain-containing HscC co-chaperone; Hsc56 NP_415182.1 680212 D 511145 CDS NP_415183.1 16128633 945218 complement(681723..683393) 1 NC_000913.3 Hsp70 family chaperone Hsc62, binds to RpoD and inhibits transcription 683393 hscC 945218 hscC Escherichia coli str. K-12 substr. MG1655 Hsp70 family chaperone Hsc62, binds to RpoD and inhibits transcription NP_415183.1 681723 R 511145 CDS NP_415184.1 16128634 945503 complement(683477..684412) 1 NC_000913.3 ribonucleoside hydrolase 1 684412 rihA 945503 rihA Escherichia coli str. K-12 substr. MG1655 ribonucleoside hydrolase 1 NP_415184.1 683477 R 511145 CDS NP_415185.1 16128635 945254 complement(684530..685255) 1 NC_000913.3 ATP-binding protein of glutamate/aspartate transport system; glutamate, aspartate ABC transporter ATP-binding subunit 685255 gltL 945254 gltL Escherichia coli str. K-12 substr. MG1655 glutamate, aspartate ABC transporter ATP-binding subunit NP_415185.1 684530 R 511145 CDS NP_415186.1 16128636 947354 complement(685255..685929) 1 NC_000913.3 glutamate/aspartate transport system permease; membrane component of ABC superfamily; glutamate, aspartate ABC transporter permease subunit 685929 gltK 947354 gltK Escherichia coli str. K-12 substr. MG1655 glutamate, aspartate ABC transporter permease subunit NP_415186.1 685255 R 511145 CDS NP_415187.1 16128637 945443 complement(685929..686669) 1 NC_000913.3 glutamate/aspartate transport system permease; membrane component of ABC superfamily; glutamate, aspartate ABC transporter permease subunit 686669 gltJ 945443 gltJ Escherichia coli str. K-12 substr. MG1655 glutamate, aspartate ABC transporter permease subunit NP_415187.1 685929 R 511145 CDS NP_415188.1 16128638 946938 complement(686839..687747) 1 NC_000913.3 periplasmic-binding component of ABC superfamily; glutamate, aspartate binding protein, periplasmic; part of GltJKLI ABC transporter 687747 gltI 946938 gltI Escherichia coli str. K-12 substr. MG1655 glutamate, aspartate binding protein, periplasmic; part of GltJKLI ABC transporter NP_415188.1 686839 R 511145 CDS NP_415189.1 16128639 944917 complement(687997..689013) 1 NC_000913.3 IS5 transposase and trans-activator 689013 insH1 944917 insH1 Escherichia coli str. K-12 substr. MG1655 IS5 transposase and trans-activator NP_415189.1 687997 R 511145 CDS NP_415190.1 16128640 946201 complement(689343..690881) 1 NC_000913.3 apolipoprotein N-acyltransferase, copper homeostasis protein, inner membrane; apolipoprotein N-acyltransferase 690881 lnt 946201 lnt Escherichia coli str. K-12 substr. MG1655 apolipoprotein N-acyltransferase NP_415190.1 689343 R 511145 CDS NP_415191.1 16128641 946417 complement(690906..691784) 1 NC_000913.3 putative transport protein; putative ion transport 691784 ybeX 946417 ybeX Escherichia coli str. K-12 substr. MG1655 putative ion transport NP_415191.1 690906 R 511145 CDS NP_415192.1 16128642 946430 complement(691874..692341) 1 NC_000913.3 ssRNA-specific endoribonuclease; co-endoribonuclease working with RNase R in 16S rRNA 3' end maturation and quality control; rRNA transcription antitermination factor 692341 ybeY 946430 ybeY Escherichia coli str. K-12 substr. MG1655 ssRNA-specific endoribonuclease; co-endoribonuclease working with RNase R in 16S rRNA 3' end maturation and quality control; rRNA transcription antitermination factor NP_415192.1 691874 R 511145 CDS NP_415193.2 145698230 948044 complement(692338..693378) 1 NC_000913.3 putative ATP-binding protein in pho regulon; PhoH-like heat shock protein 693378 ybeZ 948044 ybeZ Escherichia coli str. K-12 substr. MG1655 PhoH-like heat shock protein NP_415193.2 692338 R 511145 CDS NP_415194.1 16128644 945260 complement(693531..694955) 1 NC_000913.3 tRNA-i(6)A37 methylthiotransferase 694955 miaB 945260 miaB Escherichia coli str. K-12 substr. MG1655 tRNA-i(6)A37 methylthiotransferase NP_415194.1 693531 R 511145 CDS NP_415195.1 16128645 945261 695101..696276 1 NC_000913.3 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol oxygenase 696276 ubiF 945261 ubiF Escherichia coli str. K-12 substr. MG1655 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol oxygenase NP_415195.1 695101 D 511145 CDS NP_415200.1 16128650 945281 complement(697513..699177) 1 NC_000913.3 asparagine synthetase B 699177 asnB 945281 asnB Escherichia coli str. K-12 substr. MG1655 asparagine synthetase B NP_415200.1 697513 R 511145 CDS NP_415201.1 16128651 945283 complement(699574..700326) 1 NC_000913.3 N-acetylglucosamine metabolism; UMP phosphatase 700326 umpH 945283 umpH Escherichia coli str. K-12 substr. MG1655 UMP phosphatase NP_415201.1 699574 R 511145 CDS NP_415202.1 16128652 945285 complement(700374..701594) 1 NC_000913.3 transcriptional repressor of nag (N-acetylglucosamine) operon; N-acetylglucosamine-inducible nag divergent operon transcriptional repressor 701594 nagC 945285 nagC Escherichia coli str. K-12 substr. MG1655 N-acetylglucosamine-inducible nag divergent operon transcriptional repressor NP_415202.1 700374 R 511145 CDS NP_415203.1 16128653 945289 complement(701603..702751) 1 NC_000913.3 N-acetylglucosamine-6-phosphate deacetylase 702751 nagA 945289 nagA Escherichia coli str. K-12 substr. MG1655 N-acetylglucosamine-6-phosphate deacetylase NP_415203.1 701603 R 511145 CDS NP_415204.1 16128654 945290 complement(702811..703611) 1 NC_000913.3 glucosamine-6-phosphate deaminase 703611 nagB 945290 nagB Escherichia coli str. K-12 substr. MG1655 glucosamine-6-phosphate deaminase NP_415204.1 702811 R 511145 CDS NP_415205.1 16128655 945292 703944..705890 1 NC_000913.3 PTS system, N-acetylglucosamine-specific enzyme IIABC; fused N-acetyl glucosamine specific PTS enzyme: IIC, IIB, and IIA components 705890 nagE 945292 nagE Escherichia coli str. K-12 substr. MG1655 fused N-acetyl glucosamine specific PTS enzyme: IIC, IIB, and IIA components NP_415205.1 703944 D 511145 CDS NP_415206.1 16128656 945310 706093..707757 1 NC_000913.3 glutamine tRNA synthetase; glutamyl-tRNA synthetase 707757 glnS 945310 glnS Escherichia coli str. K-12 substr. MG1655 glutamyl-tRNA synthetase NP_415206.1 706093 D 511145 CDS NP_415207.1 16128657 945296 708334..709740 1 NC_000913.3 chitoporin, uptake of chitosugars 709740 chiP 945296 chiP Escherichia coli str. K-12 substr. MG1655 chitoporin, uptake of chitosugars NP_415207.1 708334 D 511145 CDS NP_415208.1 16128658 945713 709790..710116 1 NC_000913.3 chitosugar-induced verified lipoprotein 710116 chiQ 945713 chiQ Escherichia coli str. K-12 substr. MG1655 chitosugar-induced verified lipoprotein NP_415208.1 709790 D 511145 CDS NP_415209.1 16128659 945295 complement(710200..710646) 1 NC_000913.3 negative regulator; ferric iron uptake regulon transcriptional repressor; autorepressor 710646 fur 945295 fur Escherichia coli str. K-12 substr. MG1655 ferric iron uptake regulon transcriptional repressor; autorepressor NP_415209.1 710200 R 511145 CDS YP_001491546.1 157783150 5625562 complement(710639..710725) 1 NC_000913.3 ryhB-regulated fur leader peptide 710725 uof 5625562 uof Escherichia coli str. K-12 substr. MG1655 ryhB-regulated fur leader peptide YP_001491546.1 710639 R 511145 CDS NP_415210.1 16128660 945293 complement(710935..711465) 1 NC_000913.3 flavodoxin 1 711465 fldA 945293 fldA Escherichia coli str. K-12 substr. MG1655 flavodoxin 1 NP_415210.1 710935 R 511145 CDS NP_415211.2 90111159 945291 complement(711605..711898) 1 NC_000913.3 LexA-regulated protein, CopB family 711898 ybfE 945291 ybfE Escherichia coli str. K-12 substr. MG1655 LexA-regulated protein, CopB family NP_415211.2 711605 R 511145 CDS NP_415212.1 16128662 945288 complement(712038..712802) 1 NC_000913.3 acyl-CoA esterase 712802 ybfF 945288 ybfF Escherichia coli str. K-12 substr. MG1655 acyl-CoA esterase NP_415212.1 712038 R 511145 CDS NP_415213.1 16128663 945272 712987..713532 1 NC_000913.3 negative modulator of initiation of replication 713532 seqA 945272 seqA Escherichia coli str. K-12 substr. MG1655 negative modulator of initiation of replication NP_415213.1 712987 D 511145 CDS NP_415214.1 16128664 945271 713558..715198 1 NC_000913.3 phosphoglucomutase 715198 pgm 945271 pgm Escherichia coli str. K-12 substr. MG1655 phosphoglucomutase NP_415214.1 713558 D 511145 CDS NP_415215.1 16128665 945274 715412..715906 1 NC_000913.3 putative pectinase; lipoprotein 715906 ybfP 945274 ybfP Escherichia coli str. K-12 substr. MG1655 lipoprotein NP_415215.1 715412 D 511145 CDS b0691 945287 complement(715947..716597) 1 NC_000913.3 pseudogene; <NULL_VALUE> 716597 ybfG 945287 ybfG Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 715947 R 511145 CDS b4636 5625563 complement(716721..716870) 1 NC_000913.3 pseudogene; <NULL_VALUE> 716870 ybfI 5625563 ybfI Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 716721 R 511145 CDS NP_415219.1 16128668 945422 complement(716946..718265) 1 NC_000913.3 putrescine transport protein; putrescine/proton symporter: putrescine/ornithine antiporter 718265 potE 945422 potE Escherichia coli str. K-12 substr. MG1655 putrescine/proton symporter: putrescine/ornithine antiporter NP_415219.1 716946 R 511145 CDS NP_415220.1 16128669 945297 complement(718262..720460) 1 NC_000913.3 ornithine decarboxylase isozyme, inducible 720460 speF 945297 speF Escherichia coli str. K-12 substr. MG1655 ornithine decarboxylase isozyme, inducible NP_415220.1 718262 R 511145 CDS YP_001165310.1 145698231 948953 720583..720840 1 NC_000913.3 uncharacterized protein 720840 ybfK 948953 ybfK Escherichia coli str. K-12 substr. MG1655 uncharacterized protein YP_001165310.1 720583 D 511145 CDS NP_415222.1 16128670 945302 complement(721056..721733) 1 NC_000913.3 regulator of kdp operon (transcriptional effector); response regulator in two-component regulatory system with KdpD 721733 kdpE 945302 kdpE Escherichia coli str. K-12 substr. MG1655 response regulator in two-component regulatory system with KdpD NP_415222.1 721056 R 511145 CDS NP_415223.1 16128671 946744 complement(721730..724414) 1 NC_000913.3 sensor for high-affinity potassium transport system; sensory histidine kinase; fused sensory histidine kinase in two-component regulatory system with KdpE: signal sensing protein 724414 kdpD 946744 kdpD Escherichia coli str. K-12 substr. MG1655 fused sensory histidine kinase in two-component regulatory system with KdpE: signal sensing protein NP_415223.1 721730 R 511145 CDS NP_415224.1 16128672 947508 complement(724407..724979) 1 NC_000913.3 high-affinity potassium transport system; potassium translocating ATPase, subunit C 724979 kdpC 947508 kdpC Escherichia coli str. K-12 substr. MG1655 potassium translocating ATPase, subunit C NP_415224.1 724407 R 511145 CDS NP_415225.1 16128673 947450 complement(724988..727036) 1 NC_000913.3 ATPase of high-affinity potassium transport system, B chain; potassium translocating ATPase, subunit B 727036 kdpB 947450 kdpB Escherichia coli str. K-12 substr. MG1655 potassium translocating ATPase, subunit B NP_415225.1 724988 R 511145 CDS NP_415226.1 16128674 946045 complement(727059..728732) 1 NC_000913.3 ATPase of high-affinity potassium transport system, A chain; potassium translocating ATPase, subunit A 728732 kdpA 946045 kdpA Escherichia coli str. K-12 substr. MG1655 potassium translocating ATPase, subunit A NP_415226.1 727059 R 511145 CDS YP_588443.1 94541101 948946 complement(728732..728821) 1 NC_000913.3 potassium ion accessory transporter subunit 728821 kdpF 948946 kdpF Escherichia coli str. K-12 substr. MG1655 potassium ion accessory transporter subunit YP_588443.1 728732 R 511145 CDS NP_415228.1 16128675 947452 729134..729340 1 NC_000913.3 DUF2517 family protein 729340 ybfA 947452 ybfA Escherichia coli str. K-12 substr. MG1655 DUF2517 family protein NP_415228.1 729134 D 511145 CDS NP_415229.1 16128676 945306 729583..733776 1 NC_000913.3 Rhs family putative polymorphic toxin 733776 rhsC 945306 rhsC Escherichia coli str. K-12 substr. MG1655 Rhs family putative polymorphic toxin NP_415229.1 729583 D 511145 CDS NP_415230.1 16128677 947566 733776..734102 1 NC_000913.3 putative membrane protein 734102 ybfB 947566 ybfB Escherichia coli str. K-12 substr. MG1655 putative membrane protein NP_415230.1 733776 D 511145 CDS b0703 946124 734133..735653 1 NC_000913.3 pseudogene, Rhs family protein; <NULL_VALUE> 735653 rhsO 946124 rhsO Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 734133 D 511145 CDS NP_415232.1 16128679 947288 735650..736219 1 NC_000913.3 putative periplasmic protein 736219 ybfC 947288 ybfC Escherichia coli str. K-12 substr. MG1655 putative periplasmic protein NP_415232.1 735650 D 511145 CDS b4514 1450245 736445..736684 1 NC_000913.3 pseudogene, H repeat-associated protein; <NULL_VALUE> 736684 ybfQ 1450245 ybfQ Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 736445 D 511145 CDS b0705 947075 736825..737961 1 NC_000913.3 pseudogene, DDE domain transposase family;putative factor; Not classified; putative receptor protein; <NULL_VALUE> 737961 ybfL 947075 ybfL Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 736825 D 511145 CDS NP_415234.1 16128681 945176 738092..738853 1 NC_000913.3 putative DNA ligase; H repeat-associated putative transposase 738853 ybfD 945176 ybfD Escherichia coli str. K-12 substr. MG1655 H repeat-associated putative transposase NP_415234.1 738092 D 511145 CDS NP_415235.1 16128682 944853 739001..739510 1 NC_000913.3 DUF1722 family protein 739510 ybgA 944853 ybgA Escherichia coli str. K-12 substr. MG1655 DUF1722 family protein NP_415235.1 739001 D 511145 CDS NP_415236.1 16128683 947005 739507..740925 1 NC_000913.3 deoxyribodipyrimidine photolyase (photoreactivation); deoxyribodipyrimidine photolyase, FAD-binding 740925 phr 947005 phr Escherichia coli str. K-12 substr. MG1655 deoxyribodipyrimidine photolyase, FAD-binding NP_415236.1 739507 D 511145 CDS NP_415237.1 16128684 947368 complement(741075..742556) 1 NC_000913.3 putative transport protein; dipeptide and tripeptide permease D 742556 dtpD 947368 dtpD Escherichia coli str. K-12 substr. MG1655 dipeptide and tripeptide permease D NP_415237.1 741075 R 511145 CDS NP_415238.1 16128685 945824 742827..743570 1 NC_000913.3 NIF3 family metal-binding protein 743570 ybgI 945824 ybgI Escherichia coli str. K-12 substr. MG1655 NIF3 family metal-binding protein NP_415238.1 742827 D 511145 CDS NP_415239.1 16128686 945311 743593..744249 1 NC_000913.3 putative carboxylase; putative allophanate hydrolase, subunit 1 744249 ybgJ 945311 ybgJ Escherichia coli str. K-12 substr. MG1655 putative allophanate hydrolase, subunit 1 NP_415239.1 743593 D 511145 CDS NP_415240.1 16128687 945317 744243..745175 1 NC_000913.3 putative carboxylase; putative allophanate hydrolase, subunit 2 745175 ybgK 945317 ybgK Escherichia coli str. K-12 substr. MG1655 putative allophanate hydrolase, subunit 2 NP_415240.1 744243 D 511145 CDS NP_415241.1 16128688 945318 745165..745899 1 NC_000913.3 putative lactam utilization protein; UPF0271 family protein 745899 ybgL 945318 ybgL Escherichia coli str. K-12 substr. MG1655 UPF0271 family protein NP_415241.1 745165 D 511145 CDS NP_415242.1 16128689 945320 745935..746726 1 NC_000913.3 endonuclease VIII and DNA N-glycosylase with an AP lyase activity; endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase 746726 nei 945320 nei Escherichia coli str. K-12 substr. MG1655 endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase NP_415242.1 745935 D 511145 CDS NP_415243.4 90111163 945321 complement(746723..747769) 1 NC_000913.3 putative transport protein; regulator of aidB expression; inner membrane protein 747769 abrB 945321 abrB Escherichia coli str. K-12 substr. MG1655 regulator of aidB expression; inner membrane protein NP_415243.4 746723 R 511145 CDS NP_415244.4 90111164 947550 complement(747921..748982) 1 NC_000913.3 putative fimbrial protein 748982 ybgO 947550 ybgO Escherichia coli str. K-12 substr. MG1655 putative fimbrial protein NP_415244.4 747921 R 511145 CDS NP_415245.1 16128692 945110 complement(748979..749707) 1 NC_000913.3 putative chaperone; putative periplasmic pilin chaperone 749707 ybgP 945110 ybgP Escherichia coli str. K-12 substr. MG1655 putative periplasmic pilin chaperone NP_415245.1 748979 R 511145 CDS NP_415246.2 90111165 946537 complement(749722..752169) 1 NC_000913.3 putative outer membrane protein 752169 ybgQ 946537 ybgQ Escherichia coli str. K-12 substr. MG1655 putative outer membrane protein NP_415246.2 749722 R 511145 CDS NP_415247.1 16128694 945325 complement(752229..752795) 1 NC_000913.3 putative fimbrial-like protein; putative fimbrial-like adhesin protein 752795 ybgD 945325 ybgD Escherichia coli str. K-12 substr. MG1655 putative fimbrial-like adhesin protein NP_415247.1 752229 R 511145 CDS NP_415248.1 16128695 945323 complement(753185..754468) 1 NC_000913.3 citrate synthase 754468 gltA 945323 gltA Escherichia coli str. K-12 substr. MG1655 citrate synthase NP_415248.1 753185 R 511145 CDS NP_415249.1 16128696 945316 755177..755566 1 NC_000913.3 succinate dehydrogenase, cytochrome b556; succinate dehydrogenase, membrane subunit, binds cytochrome b556 755566 sdhC 945316 sdhC Escherichia coli str. K-12 substr. MG1655 succinate dehydrogenase, membrane subunit, binds cytochrome b556 NP_415249.1 755177 D 511145 CDS NP_415250.1 16128697 945322 755560..755907 1 NC_000913.3 succinate dehydrogenase, hydrophobic subunit; succinate dehydrogenase, membrane subunit, binds cytochrome b556 755907 sdhD 945322 sdhD Escherichia coli str. K-12 substr. MG1655 succinate dehydrogenase, membrane subunit, binds cytochrome b556 NP_415250.1 755560 D 511145 CDS NP_415251.1 16128698 945402 755907..757673 1 NC_000913.3 succinate dehydrogenase, flavoprotein subunit 757673 sdhA 945402 sdhA Escherichia coli str. K-12 substr. MG1655 succinate dehydrogenase, flavoprotein subunit NP_415251.1 755907 D 511145 CDS NP_415252.1 16128699 945300 757689..758405 1 NC_000913.3 succinate dehydrogenase, iron sulfur protein; succinate dehydrogenase, FeS subunit 758405 sdhB 945300 sdhB Escherichia coli str. K-12 substr. MG1655 succinate dehydrogenase, FeS subunit NP_415252.1 757689 D 511145 CDS NP_415254.1 16128701 945303 758706..761507 1 NC_000913.3 2-oxoglutarate dehydrogenase (decarboxylase component); 2-oxoglutarate decarboxylase, thiamine triphosphate-binding 761507 sucA 945303 sucA Escherichia coli str. K-12 substr. MG1655 2-oxoglutarate decarboxylase, thiamine triphosphate-binding NP_415254.1 758706 D 511145 CDS NP_415255.1 16128702 945307 761522..762739 1 NC_000913.3 2-oxoglutarate dehydrogenase (dihydrolipoyltranssuccinase E2 component); dihydrolipoyltranssuccinase 762739 sucB 945307 sucB Escherichia coli str. K-12 substr. MG1655 dihydrolipoyltranssuccinase NP_415255.1 761522 D 511145 CDS NP_415256.1 16128703 945312 763014..764180 1 NC_000913.3 succinyl-CoA synthetase, beta subunit 764180 sucC 945312 sucC Escherichia coli str. K-12 substr. MG1655 succinyl-CoA synthetase, beta subunit NP_415256.1 763014 D 511145 CDS NP_415257.1 16128704 945314 764180..765049 1 NC_000913.3 succinyl-CoA synthetase, alpha subunit; succinyl-CoA synthetase, NAD(P)-binding, alpha subunit 765049 sucD 945314 sucD Escherichia coli str. K-12 substr. MG1655 succinyl-CoA synthetase, NAD(P)-binding, alpha subunit NP_415257.1 764180 D 511145 CDS NP_415258.1 16128705 945371 complement(765153..765875) 1 NC_000913.3 transcriptional regulator of succinylCoA synthetase operon; Transcriptional repressor for the mannosyl-D-glycerate catabolic operon 765875 mngR 945371 mngR Escherichia coli str. K-12 substr. MG1655 Transcriptional repressor for the mannosyl-D-glycerate catabolic operon NP_415258.1 765153 R 511145 CDS NP_415259.1 16128706 945355 765984..767960 1 NC_000913.3 protein modification enzyme, induction of ompC; fused 2-O-a-mannosyl-D-glycerate specific PTS enzymes: IIA component/IIB component/IIC component 767960 mngA 945355 mngA Escherichia coli str. K-12 substr. MG1655 fused 2-O-a-mannosyl-D-glycerate specific PTS enzymes: IIA component/IIB component/IIC component NP_415259.1 765984 D 511145 CDS NP_415260.1 16128707 945359 767978..770611 1 NC_000913.3 putative sugar hydrolase; alpha-mannosidase 770611 mngB 945359 mngB Escherichia coli str. K-12 substr. MG1655 alpha-mannosidase NP_415260.1 767978 D 511145 CDS NP_415261.2 90111166 945341 771458..773026 1 NC_000913.3 cytochrome d terminal oxidase, polypeptide subunit I; cytochrome d terminal oxidase, subunit I 773026 cydA 945341 cydA Escherichia coli str. K-12 substr. MG1655 cytochrome d terminal oxidase, subunit I NP_415261.2 771458 D 511145 CDS NP_415262.1 16128709 945347 773042..774181 1 NC_000913.3 cytochrome d terminal oxidase polypeptide subunit II; cytochrome d terminal oxidase, subunit II 774181 cydB 945347 cydB Escherichia coli str. K-12 substr. MG1655 cytochrome d terminal oxidase, subunit II NP_415262.1 773042 D 511145 CDS YP_588444.1 94541102 1450246 774196..774309 1 NC_000913.3 cytochrome d (bd-I) ubiquinol oxidase subunit X 774309 cydX 1450246 cydX Escherichia coli str. K-12 substr. MG1655 cytochrome d (bd-I) ubiquinol oxidase subunit X YP_588444.1 774196 D 511145 CDS NP_415263.1 16128710 945326 774309..774602 1 NC_000913.3 putative inner membrane protein in cydABX-ybgE operon 774602 ybgE 945326 ybgE Escherichia coli str. K-12 substr. MG1655 putative inner membrane protein in cydABX-ybgE operon NP_415263.1 774309 D 511145 CDS NP_415264.1 16128711 948907 774752..775156 1 NC_000913.3 acyl-CoA thioester hydrolase 775156 ybgC 948907 ybgC Escherichia coli str. K-12 substr. MG1655 acyl-CoA thioester hydrolase NP_415264.1 774752 D 511145 CDS NP_415265.1 16128712 948900 775153..775845 1 NC_000913.3 inner membrane protein, membrane-spanning, maintains integrity of cell envelope; tolerance to group A colicins; membrane spanning protein in TolA-TolQ-TolR complex 775845 tolQ 948900 tolQ Escherichia coli str. K-12 substr. MG1655 membrane spanning protein in TolA-TolQ-TolR complex NP_415265.1 775153 D 511145 CDS NP_415266.1 16128713 945328 775849..776277 1 NC_000913.3 putative inner membrane protein, involved in the tonB-independent uptake of group A colicins; membrane spanning protein in TolA-TolQ-TolR complex 776277 tolR 945328 tolR Escherichia coli str. K-12 substr. MG1655 membrane spanning protein in TolA-TolQ-TolR complex NP_415266.1 775849 D 511145 CDS NP_415267.1 16128714 946625 776342..777607 1 NC_000913.3 membrane spanning protein, required for outer membrane integrity; membrane anchored protein in TolA-TolQ-TolR complex 777607 tolA 946625 tolA Escherichia coli str. K-12 substr. MG1655 membrane anchored protein in TolA-TolQ-TolR complex NP_415267.1 776342 D 511145 CDS NP_415268.1 16128715 945429 777740..779032 1 NC_000913.3 periplasmic protein involved in the tonb-independent uptake of group A colicins; periplasmic protein 779032 tolB 945429 tolB Escherichia coli str. K-12 substr. MG1655 periplasmic protein NP_415268.1 777740 D 511145 CDS NP_415269.1 16128716 945004 779067..779588 1 NC_000913.3 peptidoglycan-associated lipoprotein; peptidoglycan-associated outer membrane lipoprotein 779588 pal 945004 pal Escherichia coli str. K-12 substr. MG1655 peptidoglycan-associated outer membrane lipoprotein NP_415269.1 779067 D 511145 CDS NP_415270.1 16128717 947227 779598..780389 1 NC_000913.3 periplasmic TolA-binding protein 780389 ybgF 947227 ybgF Escherichia coli str. K-12 substr. MG1655 periplasmic TolA-binding protein NP_415270.1 779598 D 511145 CDS NP_415271.1 16128718 945351 782085..783128 1 NC_000913.3 quinolinate synthetase, A protein; quinolinate synthase, subunit A 783128 nadA 945351 nadA Escherichia coli str. K-12 substr. MG1655 quinolinate synthase, subunit A NP_415271.1 782085 D 511145 CDS NP_415272.1 16128719 945350 783166..783885 1 NC_000913.3 required for NMN transport; nicotinamide riboside transporter 783885 pnuC 945350 pnuC Escherichia coli str. K-12 substr. MG1655 nicotinamide riboside transporter NP_415272.1 783166 D 511145 CDS NP_415273.1 16128720 945348 complement(783882..784823) 1 NC_000913.3 putative transport system permease protein; zinc efflux system 784823 zitB 945348 zitB Escherichia coli str. K-12 substr. MG1655 zinc efflux system NP_415273.1 783882 R 511145 CDS NP_415274.1 16128721 945356 complement(784937..785317) 1 NC_000913.3 putative homeobox protein; putative periplasmic protein 785317 ybgS 945356 ybgS Escherichia coli str. K-12 substr. MG1655 putative periplasmic protein NP_415274.1 784937 R 511145 CDS NP_415275.1 16128722 945605 785633..786685 1 NC_000913.3 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase, phenylalanine repressible); 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, phenylalanine repressible 786685 aroG 945605 aroG Escherichia coli str. K-12 substr. MG1655 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, phenylalanine repressible NP_415275.1 785633 D 511145 CDS NP_415276.1 16128723 945068 complement(786843..787595) 1 NC_000913.3 phosphoglyceromutase 1 787595 gpmA 945068 gpmA Escherichia coli str. K-12 substr. MG1655 phosphoglyceromutase 1 NP_415276.1 786843 R 511145 CDS NP_415277.1 16128724 944943 complement(787797..788837) 1 NC_000913.3 aldose 1-epimerase; type-1 mutarotase 788837 galM 944943 galM Escherichia coli str. K-12 substr. MG1655 aldose 1-epimerase; type-1 mutarotase NP_415277.1 787797 R 511145 CDS NP_415278.1 16128725 945358 complement(788831..789979) 1 NC_000913.3 galactokinase 789979 galK 945358 galK Escherichia coli str. K-12 substr. MG1655 galactokinase NP_415278.1 788831 R 511145 CDS NP_415279.1 16128726 945357 complement(789983..791029) 1 NC_000913.3 galactose-1-phosphate uridylyltransferase 791029 galT 945357 galT Escherichia coli str. K-12 substr. MG1655 galactose-1-phosphate uridylyltransferase NP_415279.1 789983 R 511145 CDS NP_415280.3 49176045 945354 complement(791039..792055) 1 NC_000913.3 UDP-galactose-4-epimerase 792055 galE 945354 galE Escherichia coli str. K-12 substr. MG1655 UDP-galactose-4-epimerase NP_415280.3 791039 R 511145 CDS NP_415281.1 16128728 945368 complement(792316..793788) 1 NC_000913.3 ATP-binding component of molybdate transport system; fused molybdate transporter subunits of ABC superfamily: ATP-binding components 793788 modF 945368 modF Escherichia coli str. K-12 substr. MG1655 fused molybdate transporter subunits of ABC superfamily: ATP-binding components NP_415281.1 792316 R 511145 CDS NP_415282.1 16128729 945366 complement(793856..794644) 1 NC_000913.3 molybdate uptake regulatory protein; transcriptional repressor for the molybdenum transport operon modABC 794644 modE 945366 modE Escherichia coli str. K-12 substr. MG1655 transcriptional repressor for the molybdenum transport operon modABC NP_415282.1 793856 R 511145 CDS NP_415283.1 16128730 945365 794773..794922 1 NC_000913.3 AcrAB-TolC efflux pump accessory protein, membrane-associated 794922 acrZ 945365 acrZ Escherichia coli str. K-12 substr. MG1655 AcrAB-TolC efflux pump accessory protein, membrane-associated NP_415283.1 794773 D 511145 CDS NP_415284.1 16128731 945364 795089..795862 1 NC_000913.3 molybdate-binding periplasmic protein; permease; periplasmic-binding component of ABC superfamily; molybdate transporter subunit 795862 modA 945364 modA Escherichia coli str. K-12 substr. MG1655 molybdate transporter subunit NP_415284.1 795089 D 511145 CDS NP_415285.1 16128732 945361 795862..796551 1 NC_000913.3 molybdate transport permease protein; membrane component of ABC superfamily; molybdate transporter subunit 796551 modB 945361 modB Escherichia coli str. K-12 substr. MG1655 molybdate transporter subunit NP_415285.1 795862 D 511145 CDS NP_415286.1 16128733 945362 796554..797612 1 NC_000913.3 ATP-binding component of molybdate transport; molybdate transporter subunit 797612 modC 945362 modC Escherichia coli str. K-12 substr. MG1655 molybdate transporter subunit NP_415286.1 796554 D 511145 CDS NP_415287.1 16128734 945372 complement(797613..798431) 1 NC_000913.3 putative phosphatase; pyridoxal phosphate (PLP) phosphatase 798431 ybhA 945372 ybhA Escherichia coli str. K-12 substr. MG1655 pyridoxal phosphate (PLP) phosphatase NP_415287.1 797613 R 511145 CDS NP_415288.1 16128735 946398 798586..799581 1 NC_000913.3 putative isomerase; 6-phosphogluconolactonase 799581 pgl 946398 pgl Escherichia coli str. K-12 substr. MG1655 6-phosphogluconolactonase NP_415288.1 798586 D 511145 CDS NP_415289.4 145698233 944869 complement(799622..800575) 1 NC_000913.3 putative transcriptional regulator LYSR-type; putative DNA-binding transcriptional regulator 800575 ybhD 944869 ybhD Escherichia coli str. K-12 substr. MG1655 putative DNA-binding transcriptional regulator NP_415289.4 799622 R 511145 CDS NP_415290.1 16128737 945375 800759..801811 1 NC_000913.3 putative PrpF family isomerase 801811 ybhH 945375 ybhH Escherichia coli str. K-12 substr. MG1655 putative PrpF family isomerase NP_415290.1 800759 D 511145 CDS NP_415291.1 16128738 945377 801887..803320 1 NC_000913.3 putative membrane pump protein; putative transporter 803320 ybhI 945377 ybhI Escherichia coli str. K-12 substr. MG1655 putative transporter NP_415291.1 801887 D 511145 CDS NP_415292.2 90111167 945380 803503..805764 1 NC_000913.3 putative enzyme; putative hydratase 805764 ybhJ 945380 ybhJ Escherichia coli str. K-12 substr. MG1655 putative hydratase NP_415292.2 803503 D 511145 CDS NP_415293.1 16128740 945381 complement(805998..807281) 1 NC_000913.3 putative pectinesterase; acyl-CoA thioesterase, lipoprotein 807281 ybhC 945381 ybhC Escherichia coli str. K-12 substr. MG1655 acyl-CoA thioesterase, lipoprotein NP_415293.1 805998 R 511145 CDS NP_415294.1 16128741 945383 complement(807433..807909) 1 NC_000913.3 kinase inhibitor homolog, UPF0098 family 807909 ybhB 945383 ybhB Escherichia coli str. K-12 substr. MG1655 kinase inhibitor homolog, UPF0098 family NP_415294.1 807433 R 511145 CDS NP_415295.1 16128742 945376 complement(807968..809257) 1 NC_000913.3 7,8-diaminopelargonic acid synthetase; 7,8-diaminopelargonic acid synthase, PLP-dependent 809257 bioA 945376 bioA Escherichia coli str. K-12 substr. MG1655 7,8-diaminopelargonic acid synthase, PLP-dependent NP_415295.1 807968 R 511145 CDS NP_415296.1 16128743 945370 809344..810384 1 NC_000913.3 biotin synthesis, sulfur insertion?; biotin synthase 810384 bioB 945370 bioB Escherichia coli str. K-12 substr. MG1655 biotin synthase NP_415296.1 809344 D 511145 CDS NP_415297.1 16128744 945384 810381..811535 1 NC_000913.3 8-amino-7-oxononanoate synthase 811535 bioF 945384 bioF Escherichia coli str. K-12 substr. MG1655 8-amino-7-oxononanoate synthase NP_415297.1 810381 D 511145 CDS NP_415298.1 16128745 945388 811522..812277 1 NC_000913.3 biotin biosynthesis; reaction prior to pimeloyl CoA; malonyl-ACP O-methyltransferase, SAM-dependent 812277 bioC 945388 bioC Escherichia coli str. K-12 substr. MG1655 malonyl-ACP O-methyltransferase, SAM-dependent NP_415298.1 811522 D 511145 CDS NP_415299.1 16128746 945387 812270..812947 1 NC_000913.3 dethiobiotin synthetase 812947 bioD 945387 bioD Escherichia coli str. K-12 substr. MG1655 dethiobiotin synthetase NP_415299.1 812270 D 511145 CDS NP_415300.1 16128747 945385 813526..815547 1 NC_000913.3 DNA repair; excision nuclease subunit B; excinulease of nucleotide excision repair, DNA damage recognition component 815547 uvrB 945385 uvrB Escherichia coli str. K-12 substr. MG1655 excinulease of nucleotide excision repair, DNA damage recognition component NP_415300.1 813526 D 511145 CDS NP_415301.1 16128748 945390 complement(815739..816647) 1 NC_000913.3 putative structural protein; putative NAD(P)-binding transferase 816647 ybhK 945390 ybhK Escherichia coli str. K-12 substr. MG1655 putative NAD(P)-binding transferase NP_415301.1 815739 R 511145 CDS NP_415302.1 16128749 945392 817044..818033 1 NC_000913.3 molybdopterin biosynthesis, protein A; molybdopterin biosynthesis protein A 818033 moaA 945392 moaA Escherichia coli str. K-12 substr. MG1655 molybdopterin biosynthesis protein A NP_415302.1 817044 D 511145 CDS NP_415303.1 16128750 945396 818055..818567 1 NC_000913.3 moaB is not required for molybdopterin biosynthesis; inactive molybdopterin adenylyltransferase 818567 moaB 945396 moaB Escherichia coli str. K-12 substr. MG1655 inactive molybdopterin adenylyltransferase NP_415303.1 818055 D 511145 CDS NP_415304.1 16128751 945397 818570..819055 1 NC_000913.3 molybdopterin biosynthesis, protein C 819055 moaC 945397 moaC Escherichia coli str. K-12 substr. MG1655 molybdopterin biosynthesis, protein C NP_415304.1 818570 D 511145 CDS NP_415305.1 16128752 945398 819048..819293 1 NC_000913.3 molybdopterin biosynthesis; molybdopterin synthase, small subunit 819293 moaD 945398 moaD Escherichia coli str. K-12 substr. MG1655 molybdopterin synthase, small subunit NP_415305.1 819048 D 511145 CDS NP_415306.1 16128753 945399 819295..819747 1 NC_000913.3 molybdopterin converting factor, subunit 2; molybdopterin synthase, large subunit 819747 moaE 945399 moaE Escherichia coli str. K-12 substr. MG1655 molybdopterin synthase, large subunit NP_415306.1 819295 D 511145 CDS NP_415307.1 16128754 945401 819884..820588 1 NC_000913.3 UPF0005 family inner membrane protein 820588 ybhL 945401 ybhL Escherichia coli str. K-12 substr. MG1655 UPF0005 family inner membrane protein NP_415307.1 819884 D 511145 CDS NP_415308.1 16128755 949001 820793..821506 1 NC_000913.3 UPF0005 family inner membrane protein 821506 ybhM 949001 ybhM Escherichia coli str. K-12 substr. MG1655 UPF0005 family inner membrane protein NP_415308.1 820793 D 511145 CDS NP_415309.1 16128756 945410 complement(821542..822498) 1 NC_000913.3 UPF0104 family inner membrane protein 822498 ybhN 945410 ybhN Escherichia coli str. K-12 substr. MG1655 UPF0104 family inner membrane protein NP_415309.1 821542 R 511145 CDS NP_415310.1 16128757 945409 complement(822498..823739) 1 NC_000913.3 cardiolipin synthase activity; cardiolipin synthase 2 823739 clsB 945409 clsB Escherichia coli str. K-12 substr. MG1655 cardiolipin synthase 2 NP_415310.1 822498 R 511145 CDS NP_415311.1 16128758 945408 complement(823736..824497) 1 NC_000913.3 endo/exonuclease/phosphatase family protein 824497 ybhP 945408 ybhP Escherichia coli str. K-12 substr. MG1655 endo/exonuclease/phosphatase family protein NP_415311.1 823736 R 511145 CDS NP_415312.1 16128759 945405 824630..825040 1 NC_000913.3 inner membrane protein 825040 ybhQ 945405 ybhQ Escherichia coli str. K-12 substr. MG1655 inner membrane protein NP_415312.1 824630 D 511145 CDS NP_415313.1 16128760 945403 complement(825002..826108) 1 NC_000913.3 inner membrane putative ABC superfamily transporter permease 826108 ybhR 945403 ybhR Escherichia coli str. K-12 substr. MG1655 inner membrane putative ABC superfamily transporter permease NP_415313.1 825002 R 511145 CDS NP_415314.1 16128761 945411 complement(826119..827252) 1 NC_000913.3 inner membrane putative ABC superfamily transporter permease 827252 ybhS 945411 ybhS Escherichia coli str. K-12 substr. MG1655 inner membrane putative ABC superfamily transporter permease NP_415314.1 826119 R 511145 CDS NP_415315.4 90111168 945413 complement(827245..828981) 1 NC_000913.3 putative ATP-binding component of a transport system; putative transporter subunit of ABC superfamily: ATP-binding component 828981 ybhF 945413 ybhF Escherichia coli str. K-12 substr. MG1655 putative transporter subunit of ABC superfamily: ATP-binding component NP_415315.4 827245 R 511145 CDS NP_415316.1 16128763 945414 complement(828974..829972) 1 NC_000913.3 putative membrane protein; putative membrane fusion protein (MFP) component of efflux pump, membrane anchor 829972 ybhG 945414 ybhG Escherichia coli str. K-12 substr. MG1655 putative membrane fusion protein (MFP) component of efflux pump, membrane anchor NP_415316.1 828974 R 511145 CDS NP_415317.4 162135896 945421 complement(829972..830643) 1 NC_000913.3 putative transcriptional regulator; DUF1956 domain-containing tetR family putative transcriptional regulator 830643 ybiH 945421 ybiH Escherichia coli str. K-12 substr. MG1655 DUF1956 domain-containing tetR family putative transcriptional regulator NP_415317.4 829972 R 511145 CDS NP_415318.1 16128765 945425 830872..832236 1 NC_000913.3 putative ATP-dependent RNA helicase; ATP-dependent RNA helicase 832236 rhlE 945425 rhlE Escherichia coli str. K-12 substr. MG1655 ATP-dependent RNA helicase NP_415318.1 830872 D 511145 CDS NP_415319.1 16128766 945426 complement(832468..832950) 1 NC_000913.3 DUF1768 family protein 832950 ybiA 945426 ybiA Escherichia coli str. K-12 substr. MG1655 DUF1768 family protein NP_415319.1 832468 R 511145 CDS NP_415320.1 16128767 945431 833070..835220 1 NC_000913.3 probably ATP-dependent helicase; ATP-dependent DNA helicase 835220 dinG 945431 dinG Escherichia coli str. K-12 substr. MG1655 ATP-dependent DNA helicase NP_415320.1 833070 D 511145 CDS NP_415321.1 16128768 945424 835248..836210 1 NC_000913.3 putative enzyme; putative family 3 glycosyltransferase 836210 ybiB 945424 ybiB Escherichia coli str. K-12 substr. MG1655 putative family 3 glycosyltransferase NP_415321.1 835248 D 511145 CDS NP_415322.1 16128769 945412 836351..837436 1 NC_000913.3 putative dehydrogenase 837436 ybiC 945412 ybiC Escherichia coli str. K-12 substr. MG1655 putative dehydrogenase NP_415322.1 836351 D 511145 CDS NP_415323.1 16128770 945433 complement(837665..837925) 1 NC_000913.3 DUF1471 family putative periplasmic protein 837925 ybiJ 945433 ybiJ Escherichia coli str. K-12 substr. MG1655 DUF1471 family putative periplasmic protein NP_415323.1 837665 R 511145 CDS NP_415324.1 16128771 945434 complement(838190..838456) 1 NC_000913.3 DksA-type zinc finger protein 838456 ybiI 945434 ybiI Escherichia coli str. K-12 substr. MG1655 DksA-type zinc finger protein NP_415324.1 838190 R 511145 CDS NP_415325.4 90111170 947502 complement(838530..839207) 1 NC_000913.3 putative enzyme; Fe(II)-dependent oxygenase superfamily protein 839207 ybiX 947502 ybiX Escherichia coli str. K-12 substr. MG1655 Fe(II)-dependent oxygenase superfamily protein NP_415325.4 838530 R 511145 CDS NP_415326.1 16128773 946246 complement(839249..841531) 1 NC_000913.3 ferric iron outer membrane transporter, TonB-dependent; siderophore receptor for ferri-dihydroxybenzoylserine, ferri-dihydroxybenzoate and other catecholate siderophores; surface receptor for colicins G, H, and E492; catecholate siderophore receptor Fiu 841531 fiu 946246 fiu Escherichia coli str. K-12 substr. MG1655 catecholate siderophore receptor Fiu NP_415326.1 839249 R 511145 CDS NP_415327.2 90111171 947523 complement(841796..842056) 1 NC_000913.3 colanic acid mucoidy stimulation protein 842056 mcbA 947523 mcbA Escherichia coli str. K-12 substr. MG1655 colanic acid mucoidy stimulation protein NP_415327.2 841796 R 511145 CDS NP_415328.4 162135897 944938 842332..843258 1 NC_000913.3 23S rRNA m(6)A1618 methyltransferase, SAM-dependent 843258 rlmF 944938 rlmF Escherichia coli str. K-12 substr. MG1655 23S rRNA m(6)A1618 methyltransferase, SAM-dependent NP_415328.4 842332 D 511145 CDS NP_415329.4 90111173 945935 complement(843255..845480) 1 NC_000913.3 putative transport protein; mechanosensitive channel protein, intermediate conductance 845480 ybiO 945935 ybiO Escherichia coli str. K-12 substr. MG1655 mechanosensitive channel protein, intermediate conductance NP_415329.4 843255 R 511145 CDS NP_415330.1 16128777 945435 complement(845741..846463) 1 NC_000913.3 ATP-binding component of glutamine high-affinity transport system; glutamine transporter subunit 846463 glnQ 945435 glnQ Escherichia coli str. K-12 substr. MG1655 glutamine transporter subunit NP_415330.1 845741 R 511145 CDS NP_415331.1 16128778 945621 complement(846460..847119) 1 NC_000913.3 glutamine high-affinity transport system; membrane component; glutamine transporter subunit 847119 glnP 945621 glnP Escherichia coli str. K-12 substr. MG1655 glutamine transporter subunit NP_415331.1 846460 R 511145 CDS NP_415332.1 16128779 944872 complement(847258..848004) 1 NC_000913.3 periplasmic glutamine-binding protein; permease; glutamine transporter subunit 848004 glnH 944872 glnH Escherichia coli str. K-12 substr. MG1655 glutamine transporter subunit NP_415332.1 847258 R 511145 CDS NP_415333.1 16128780 945101 complement(848408..848911) 1 NC_000913.3 global regulator, starvation conditions; Fe-binding and storage protein; stress-inducible DNA-binding protetin 848911 dps 945101 dps Escherichia coli str. K-12 substr. MG1655 Fe-binding and storage protein; stress-inducible DNA-binding protetin NP_415333.1 848408 R 511145 CDS NP_415334.1 16128781 947045 complement(849210..850097) 1 NC_000913.3 putative transmembrane subunit; threonine and homoserine efflux system 850097 rhtA 947045 rhtA Escherichia coli str. K-12 substr. MG1655 threonine and homoserine efflux system NP_415334.1 849210 R 511145 CDS NP_415335.1 16128782 944967 850450..850965 1 NC_000913.3 outer membrane protein X 850965 ompX 944967 ompX Escherichia coli str. K-12 substr. MG1655 outer membrane protein X NP_415335.1 850450 D 511145 CDS NP_415336.1 16128783 945360 complement(851014..852597) 1 NC_000913.3 putative enzyme; putative EptAB family phosphoethanolamine transferase, inner membrane protein 852597 ybiP 945360 ybiP Escherichia coli str. K-12 substr. MG1655 putative EptAB family phosphoethanolamine transferase, inner membrane protein NP_415336.1 851014 R 511145 CDS YP_009029995.1 635341463 14678509 complement(852869..852997) 1 NC_000913.3 Mn(2)-response protein, MntR-repressed 852997 mntS 14678509 mntS Escherichia coli str. K-12 substr. MG1655 Mn(2)-response protein, MntR-repressed YP_009029995.1 852869 R 511145 CDS NP_415338.1 16128785 945437 853183..853650 1 NC_000913.3 Mn(2+)-responsive manganese regulon transcriptional regulator 853650 mntR 945437 mntR Escherichia coli str. K-12 substr. MG1655 Mn(2+)-responsive manganese regulon transcriptional regulator NP_415338.1 853183 D 511145 CDS NP_415339.1 16128786 945438 853647..854765 1 NC_000913.3 putative transporter 854765 ybiR 945438 ybiR Escherichia coli str. K-12 substr. MG1655 putative transporter NP_415339.1 853647 D 511145 CDS NP_415340.1 16128787 945441 complement(854824..855744) 1 NC_000913.3 L,D-transpeptidase linking Lpp to murein 855744 ldtB 945441 ldtB Escherichia coli str. K-12 substr. MG1655 L,D-transpeptidase linking Lpp to murein NP_415340.1 854824 R 511145 CDS NP_415341.1 16128788 945440 855963..857555 1 NC_000913.3 putative ATP-binding component of a transport system; putative transporter subunit of ABC superfamily: ATP-binding component 857555 ybiT 945440 ybiT Escherichia coli str. K-12 substr. MG1655 putative transporter subunit of ABC superfamily: ATP-binding component NP_415341.1 855963 D 511145 CDS NP_415342.1 16128789 945439 complement(857796..859061) 1 NC_000913.3 DUF1479 family protein 859061 ybiU 945439 ybiU Escherichia coli str. K-12 substr. MG1655 DUF1479 family protein NP_415342.1 857796 R 511145 CDS NP_415343.1 16128790 945432 complement(859213..860028) 1 NC_000913.3 sugar phosphatase; preference for fructose-1-P, ribose-5-P and glucose-6-P 860028 ybiV 945432 ybiV Escherichia coli str. K-12 substr. MG1655 sugar phosphatase; preference for fructose-1-P, ribose-5-P and glucose-6-P NP_415343.1 859213 R 511145 CDS NP_415344.1 16128791 945444 complement(860174..862606) 1 NC_000913.3 putative pyruvate formate lyase 862606 ybiW 945444 ybiW Escherichia coli str. K-12 substr. MG1655 putative pyruvate formate lyase NP_415344.1 860174 R 511145 CDS NP_415345.2 226524704 945445 complement(862612..863511) 1 NC_000913.3 putative pyruvate formate lyase activating enzyme 863511 ybiY 945445 ybiY Escherichia coli str. K-12 substr. MG1655 putative pyruvate formate lyase activating enzyme NP_415345.2 862612 R 511145 CDS NP_415346.4 90111174 945449 863642..864304 1 NC_000913.3 fructose-6-phosphate aldolase; fructose-6-phosphate aldolase 1 864304 fsaA 945449 fsaA Escherichia coli str. K-12 substr. MG1655 fructose-6-phosphate aldolase 1 NP_415346.4 863642 D 511145 CDS NP_415347.1 16128794 945452 complement(864380..865129) 1 NC_000913.3 molybdopterin biosynthesis; molybdopterin synthase sulfurylase 865129 moeB 945452 moeB Escherichia coli str. K-12 substr. MG1655 molybdopterin synthase sulfurylase NP_415347.1 864380 R 511145 CDS NP_415348.1 16128795 945454 complement(865129..866364) 1 NC_000913.3 molybdopterin biosynthesis; molybdopterin molybdenumtransferase; molybdopterin biosynthesis protein 866364 moeA 945454 moeA Escherichia coli str. K-12 substr. MG1655 molybdopterin molybdenumtransferase; molybdopterin biosynthesis protein NP_415348.1 865129 R 511145 CDS NP_415349.1 16128796 945456 866568..867533 1 NC_000913.3 putative asparaginase; Isoaspartyl peptidase 867533 iaaA 945456 iaaA Escherichia coli str. K-12 substr. MG1655 Isoaspartyl peptidase NP_415349.1 866568 D 511145 CDS NP_415350.2 145698235 945457 867520..869391 1 NC_000913.3 putative ATP-binding component of a transport system; glutathione transporter ATP-binding protein, ABC superfamily 869391 gsiA 945457 gsiA Escherichia coli str. K-12 substr. MG1655 glutathione transporter ATP-binding protein, ABC superfamily NP_415350.2 867520 D 511145 CDS NP_415351.1 16128798 945459 869411..870949 1 NC_000913.3 putative transport protein; glutathione periplasmic binding protein, ABC superfamily transporter 870949 gsiB 945459 gsiB Escherichia coli str. K-12 substr. MG1655 glutathione periplasmic binding protein, ABC superfamily transporter NP_415351.1 869411 D 511145 CDS NP_415352.1 16128799 945460 870967..871887 1 NC_000913.3 putative transport system permease protein; glutathione transporter, permease component, ABC superfamily 871887 gsiC 945460 gsiC Escherichia coli str. K-12 substr. MG1655 glutathione transporter, permease component, ABC superfamily NP_415352.1 870967 D 511145 CDS NP_415353.1 16128800 945461 871890..872801 1 NC_000913.3 putative transport system permease protein; glutathione transporter, permease component, ABC superfamily 872801 gsiD 945461 gsiD Escherichia coli str. K-12 substr. MG1655 glutathione transporter, permease component, ABC superfamily NP_415353.1 871890 D 511145 CDS NP_415354.1 16128801 945462 872979..875327 1 NC_000913.3 putative membrane-anchored cyclic-di-GMP phosphodiesterase 875327 yliE 945462 yliE Escherichia coli str. K-12 substr. MG1655 putative membrane-anchored cyclic-di-GMP phosphodiesterase NP_415354.1 872979 D 511145 CDS NP_415355.1 16128802 945463 875335..876663 1 NC_000913.3 putative membrane-anchored diguanylate cyclase 876663 yliF 945463 yliF Escherichia coli str. K-12 substr. MG1655 putative membrane-anchored diguanylate cyclase NP_415355.1 875335 D 511145 CDS NP_415356.1 16128803 945465 complement(876710..878035) 1 NC_000913.3 ribosomal protein S12 methylthiotransferase; radical SAM superfamily 878035 rimO 945465 rimO Escherichia coli str. K-12 substr. MG1655 ribosomal protein S12 methylthiotransferase; radical SAM superfamily NP_415356.1 876710 R 511145 CDS NP_415357.1 16128804 945466 878248..878631 1 NC_000913.3 putative receptor; repressor of biofilm formation by indole transport regulation 878631 bssR 945466 bssR Escherichia coli str. K-12 substr. MG1655 repressor of biofilm formation by indole transport regulation NP_415357.1 878248 D 511145 CDS NP_415358.1 16128805 945467 878742..879857 1 NC_000913.3 putative dehydrogenase; soluble aldose sugar dehydrogenase 879857 yliI 945467 yliI Escherichia coli str. K-12 substr. MG1655 soluble aldose sugar dehydrogenase NP_415358.1 878742 D 511145 CDS NP_415359.4 90111175 945469 complement(879854..880480) 1 NC_000913.3 putative transferase; glutathione S-transferase 880480 gstB 945469 gstB Escherichia coli str. K-12 substr. MG1655 glutathione S-transferase NP_415359.4 879854 R 511145 CDS NP_415360.1 16128807 945455 880727..881929 1 NC_000913.3 D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6; D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6a) 881929 dacC 945455 dacC Escherichia coli str. K-12 substr. MG1655 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6a) NP_415360.1 880727 D 511145 CDS NP_415361.1 16128808 945453 complement(881976..882734) 1 NC_000913.3 transcriptional repressor for deo operon, tsx, nupG; deoxyribose-5-phosphate-inducible deoxyribose operon transcriptional repressor; repressor of nupG and tsx 882734 deoR 945453 deoR Escherichia coli str. K-12 substr. MG1655 deoxyribose-5-phosphate-inducible deoxyribose operon transcriptional repressor; repressor of nupG and tsx NP_415361.1 881976 R 511145 CDS NP_415362.1 16128809 945450 complement(882792..883388) 1 NC_000913.3 undecaprenyl pyrophosphate phosphatase 883388 ybjG 945450 ybjG Escherichia coli str. K-12 substr. MG1655 undecaprenyl pyrophosphate phosphatase NP_415362.1 882792 R 511145 CDS NP_415363.1 16128810 945448 883673..884905 1 NC_000913.3 proton motive force efflux pump; multidrug efflux system protein 884905 mdfA 945448 mdfA Escherichia coli str. K-12 substr. MG1655 multidrug efflux system protein NP_415363.1 883673 D 511145 CDS NP_415364.1 16128811 945447 complement(884946..885230) 1 NC_000913.3 uncharacterized protein 885230 ybjH 945447 ybjH Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_415364.1 884946 R 511145 CDS NP_415365.4 90111176 945470 complement(885316..886131) 1 NC_000913.3 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase; pyrimidine phosphatase; riboflavin synthesis 886131 ybjI 945470 ybjI Escherichia coli str. K-12 substr. MG1655 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase; pyrimidine phosphatase; riboflavin synthesis NP_415365.4 885316 R 511145 CDS NP_415366.1 16128813 945471 complement(886131..887339) 1 NC_000913.3 putative DEOR-type transcriptional regulator; putative transporter 887339 ybjJ 945471 ybjJ Escherichia coli str. K-12 substr. MG1655 putative transporter NP_415366.1 886131 R 511145 CDS NP_415367.1 16128814 945473 887423..887959 1 NC_000913.3 putative DEOR-type transcriptional regulator; transcriptional regulator of csgD and ybiJI; autoregulator 887959 rcdA 945473 rcdA Escherichia coli str. K-12 substr. MG1655 transcriptional regulator of csgD and ybiJI; autoregulator NP_415367.1 887423 D 511145 CDS NP_415368.1 16128815 945474 complement(888134..889819) 1 NC_000913.3 putative transport protein; putative transporter 889819 ybjL 945474 ybjL Escherichia coli str. K-12 substr. MG1655 putative transporter NP_415368.1 888134 R 511145 CDS NP_415369.1 16128816 945477 890089..890466 1 NC_000913.3 inner membrane protein 890466 ybjM 945477 ybjM Escherichia coli str. K-12 substr. MG1655 inner membrane protein NP_415369.1 890089 D 511145 CDS NP_415370.1 16128817 945479 complement(890496..890753) 1 NC_000913.3 glutaredoxin1 redox coenzyme for glutathione-dependent ribonucleotide reductase; glutaredoxin 1, redox coenzyme for ribonucleotide reductase (RNR1a) 890753 grxA 945479 grxA Escherichia coli str. K-12 substr. MG1655 glutaredoxin 1, redox coenzyme for ribonucleotide reductase (RNR1a) NP_415370.1 890496 R 511145 CDS NP_415371.1 16128818 945481 890913..891200 1 NC_000913.3 DUF1418 family protein 891200 ybjC 945481 ybjC Escherichia coli str. K-12 substr. MG1655 DUF1418 family protein NP_415371.1 890913 D 511145 CDS NP_415372.1 16128819 945483 891184..891906 1 NC_000913.3 nitroreductase A, NADPH-dependent, FMN-dependent 891906 nfsA 945483 nfsA Escherichia coli str. K-12 substr. MG1655 nitroreductase A, NADPH-dependent, FMN-dependent NP_415372.1 891184 D 511145 CDS NP_415373.1 16128820 945484 891967..892869 1 NC_000913.3 ribosomal protein S6 modification protein 892869 rimK 945484 rimK Escherichia coli str. K-12 substr. MG1655 ribosomal protein S6 modification protein NP_415373.1 891967 D 511145 CDS NP_415374.1 16128821 945482 892957..893433 1 NC_000913.3 putative sensory transduction regulator; negative regulator of motility; multicopy suppressor of coaA(Ts) 893433 ybjN 945482 ybjN Escherichia coli str. K-12 substr. MG1655 negative regulator of motility; multicopy suppressor of coaA(Ts) NP_415374.1 892957 D 511145 CDS NP_415375.1 16128822 945480 893784..894896 1 NC_000913.3 periplasmic putrescine-binding protein; permease protein; putrescine transporter subunit: periplasmic-binding component of ABC superfamily 894896 potF 945480 potF Escherichia coli str. K-12 substr. MG1655 putrescine transporter subunit: periplasmic-binding component of ABC superfamily NP_415375.1 893784 D 511145 CDS NP_415376.4 90111177 945476 894991..896124 1 NC_000913.3 ATP-binding component of putrescine transport system; putrescine transporter subunit: ATP-binding component of ABC superfamily 896124 potG 945476 potG Escherichia coli str. K-12 substr. MG1655 putrescine transporter subunit: ATP-binding component of ABC superfamily NP_415376.4 894991 D 511145 CDS NP_415377.1 16128824 945475 896134..897087 1 NC_000913.3 putrescine transport protein; permease; putrescine transporter subunit: membrane component of ABC superfamily 897087 potH 945475 potH Escherichia coli str. K-12 substr. MG1655 putrescine transporter subunit: membrane component of ABC superfamily NP_415377.1 896134 D 511145 CDS NP_415378.1 16128825 945485 897084..897929 1 NC_000913.3 putrescine transport protein; permease; putrescine transporter subunit: membrane component of ABC superfamily 897929 potI 945485 potI Escherichia coli str. K-12 substr. MG1655 putrescine transporter subunit: membrane component of ABC superfamily NP_415378.1 897084 D 511145 CDS NP_415379.1 16128826 945488 897989..898477 1 NC_000913.3 DUF2593 family inner membrane protein 898477 ybjO 945488 ybjO Escherichia coli str. K-12 substr. MG1655 DUF2593 family inner membrane protein NP_415379.1 897989 D 511145 CDS NP_415380.1 16128827 947260 898518..899645 1 NC_000913.3 putative enzyme; 23S rRNA m(5)U747 methyltransferase, SAM-dependent 899645 rlmC 947260 rlmC Escherichia coli str. K-12 substr. MG1655 23S rRNA m(5)U747 methyltransferase, SAM-dependent NP_415380.1 898518 D 511145 CDS NP_415381.1 16128828 948981 complement(899844..900575) 1 NC_000913.3 arginine 3rd transport system periplasmic binding protein; arginine binding protein, periplasmic 900575 artJ 948981 artJ Escherichia coli str. K-12 substr. MG1655 arginine binding protein, periplasmic NP_415381.1 899844 R 511145 CDS NP_415382.1 16128829 949066 complement(900866..901534) 1 NC_000913.3 arginine 3rd transport system permease protein; membrane component of ABC superfamily; arginine transporter subunit 901534 artM 949066 artM Escherichia coli str. K-12 substr. MG1655 arginine transporter subunit NP_415382.1 900866 R 511145 CDS NP_415383.1 16128830 949046 complement(901534..902250) 1 NC_000913.3 arginine 3rd transport system permease protein; membrane component of ABC superfamily; arginine transporter subunit 902250 artQ 949046 artQ Escherichia coli str. K-12 substr. MG1655 arginine transporter subunit NP_415383.1 901534 R 511145 CDS NP_415384.1 16128831 948988 complement(902257..902988) 1 NC_000913.3 arginine 3rd transport system periplasmic binding protein; arginine transporter subunit 902988 artI 948988 artI Escherichia coli str. K-12 substr. MG1655 arginine transporter subunit NP_415384.1 902257 R 511145 CDS NP_415385.1 16128832 945489 complement(903006..903734) 1 NC_000913.3 ATP-binding component of 3rd arginine transport system; arginine transporter subunit 903734 artP 945489 artP Escherichia coli str. K-12 substr. MG1655 arginine transporter subunit NP_415385.1 903006 R 511145 CDS NP_415386.1 16128833 945491 complement(903952..904467) 1 NC_000913.3 putative lipoprotein; lipoprotein 904467 ybjP 945491 ybjP Escherichia coli str. K-12 substr. MG1655 lipoprotein NP_415386.1 903952 R 511145 CDS NP_415387.1 16128834 945493 904593..904916 1 NC_000913.3 UPF0145 family protein 904916 ybjQ 945493 ybjQ Escherichia coli str. K-12 substr. MG1655 UPF0145 family protein NP_415387.1 904593 D 511145 CDS NP_415388.1 16128835 945494 904913..905743 1 NC_000913.3 1,6-anhydro-N-acetylmuramyl-L-alanine amidase, Zn-dependent; OM lipoprotein 905743 amiD 945494 amiD Escherichia coli str. K-12 substr. MG1655 1,6-anhydro-N-acetylmuramyl-L-alanine amidase, Zn-dependent; OM lipoprotein NP_415388.1 904913 D 511145 CDS NP_415389.2 90111178 945495 complement(905740..906753) 1 NC_000913.3 putative NAD(P)H-dependent oxidoreductase with NAD(P)-binding Rossmann-fold domain 906753 ybjS 945495 ybjS Escherichia coli str. K-12 substr. MG1655 putative NAD(P)H-dependent oxidoreductase with NAD(P)-binding Rossmann-fold domain NP_415389.2 905740 R 511145 CDS NP_415390.4 90111179 945496 complement(906852..908282) 1 NC_000913.3 putative NAD-dependent oxidoreductase 908282 ybjT 945496 ybjT Escherichia coli str. K-12 substr. MG1655 putative NAD-dependent oxidoreductase NP_415390.4 906852 R 511145 CDS NP_415391.1 16128838 944955 complement(908293..909294) 1 NC_000913.3 L-allo-threonine aldolase, PLP-dependent 909294 ltaE 944955 ltaE Escherichia coli str. K-12 substr. MG1655 L-allo-threonine aldolase, PLP-dependent NP_415391.1 908293 R 511145 CDS NP_415392.1 16128839 946132 complement(909331..911049) 1 NC_000913.3 pyruvate oxidase; pyruvate dehydrogenase (pyruvate oxidase), thiamine triphosphate-binding, FAD-binding 911049 poxB 946132 poxB Escherichia coli str. K-12 substr. MG1655 pyruvate dehydrogenase (pyruvate oxidase), thiamine triphosphate-binding, FAD-binding NP_415392.1 909331 R 511145 CDS NP_415393.1 16128840 947660 complement(911182..912150) 1 NC_000913.3 HCP oxidoreductase, NADH-dependent 912150 hcr 947660 hcr Escherichia coli str. K-12 substr. MG1655 HCP oxidoreductase, NADH-dependent NP_415393.1 911182 R 511145 CDS NP_415394.4 90111180 946592 complement(912162..913814) 1 NC_000913.3 hybrid-cluster [4Fe-2S-2O] protein in anaerobic terminal reductases 913814 hcp 946592 hcp Escherichia coli str. K-12 substr. MG1655 hybrid-cluster [4Fe-2S-2O] protein in anaerobic terminal reductases NP_415394.4 912162 R 511145 CDS NP_415395.2 90111181 947142 complement(913958..914857) 1 NC_000913.3 putative surface protein; putative transporter 914857 ybjE 947142 ybjE Escherichia coli str. K-12 substr. MG1655 putative transporter NP_415395.2 913958 R 511145 CDS NP_415396.1 16128843 945497 complement(915352..916047) 1 NC_000913.3 transmembrane water channel; aquaporin Z; aquaporin Z 916047 aqpZ 945497 aqpZ Escherichia coli str. K-12 substr. MG1655 aquaporin Z NP_415396.1 915352 R 511145 CDS NP_415397.1 16128844 945498 916473..918131 1 NC_000913.3 putative OLD family ATP-dependent endonuclease; DUF2813 family protein 918131 ybjD 945498 ybjD Escherichia coli str. K-12 substr. MG1655 putative OLD family ATP-dependent endonuclease; DUF2813 family protein NP_415397.1 916473 D 511145 CDS NP_415398.1 16128845 946025 complement(918128..919120) 1 NC_000913.3 putative enzyme; DUF535 family protein 919120 ybjX 946025 ybjX Escherichia coli str. K-12 substr. MG1655 DUF535 family protein NP_415398.1 918128 R 511145 CDS NP_415399.4 90111182 947322 919235..920350 1 NC_000913.3 macrolide transporter subunit, membrane fusion protein (MFP) component 920350 macA 947322 macA Escherichia coli str. K-12 substr. MG1655 macrolide transporter subunit, membrane fusion protein (MFP) component NP_415399.4 919235 D 511145 CDS NP_415400.1 16128847 945164 920347..922293 1 NC_000913.3 fused macrolide transporter subunits of ABC superfamily: ATP-binding component/membrane component 922293 macB 945164 macB Escherichia coli str. K-12 substr. MG1655 fused macrolide transporter subunits of ABC superfamily: ATP-binding component/membrane component NP_415400.1 920347 D 511145 CDS NP_415401.1 16128848 945669 complement(922366..922590) 1 NC_000913.3 stress induced DNA replication inhibitor.; inhibitor of DNA replication, cold shock protein homolog 922590 cspD 945669 cspD Escherichia coli str. K-12 substr. MG1655 inhibitor of DNA replication, cold shock protein homolog NP_415401.1 922366 R 511145 CDS NP_415402.1 16128849 948443 922913..923233 1 NC_000913.3 regulatory protein for ClpA substrate specificity 923233 clpS 948443 clpS Escherichia coli str. K-12 substr. MG1655 regulatory protein for ClpA substrate specificity NP_415402.1 922913 D 511145 CDS NP_415403.1 16128850 945764 923264..925540 1 NC_000913.3 ATP-binding component of serine protease; ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine protease, chaperone activity 925540 clpA 945764 clpA Escherichia coli str. K-12 substr. MG1655 ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine protease, chaperone activity NP_415403.1 923264 D 511145 CDS NP_415404.1 16128851 945500 complement(926225..926443) 1 NC_000913.3 protein chain initiation factor IF-1; translation initiation factor IF-1 926443 infA 945500 infA Escherichia coli str. K-12 substr. MG1655 translation initiation factor IF-1 NP_415404.1 926225 R 511145 CDS NP_415405.1 16128852 945490 complement(926728..927432) 1 NC_000913.3 leucyl, phenylalanyl-tRNA-protein transferase; leucyl/phenylalanyl-tRNA-protein transferase 927432 aat 945490 aat Escherichia coli str. K-12 substr. MG1655 leucyl/phenylalanyl-tRNA-protein transferase NP_415405.1 926728 R 511145 CDS NP_415406.1 16128853 945504 complement(927474..929195) 1 NC_000913.3 ATP-binding component of cytochrome-related transport; fused glutathione, cysteine exporter subunits of ABC superfamily: membrane component/ATP-binding component 929195 cydC 945504 cydC Escherichia coli str. K-12 substr. MG1655 fused glutathione, cysteine exporter subunits of ABC superfamily: membrane component/ATP-binding component NP_415406.1 927474 R 511145 CDS NP_415407.1 16128854 949052 complement(929196..930962) 1 NC_000913.3 ATP-binding component of cytochrome-related transport, Zn sensitive; fused glutathione, cysteine exporter subunits of ABC superfamily: membrane component/ATP-binding component 930962 cydD 949052 cydD Escherichia coli str. K-12 substr. MG1655 fused glutathione, cysteine exporter subunits of ABC superfamily: membrane component/ATP-binding component NP_415407.1 929196 R 511145 CDS NP_415408.1 16128855 949054 complement(931085..932050) 1 NC_000913.3 thioredoxin reductase; thioredoxin reductase, FAD/NAD(P)-binding 932050 trxB 949054 trxB Escherichia coli str. K-12 substr. MG1655 thioredoxin reductase, FAD/NAD(P)-binding NP_415408.1 931085 R 511145 CDS NP_415409.1 16128856 949051 932595..933089 1 NC_000913.3 regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system; leucine-responsive global transcriptional regulator 933089 lrp 949051 lrp Escherichia coli str. K-12 substr. MG1655 leucine-responsive global transcriptional regulator NP_415409.1 932595 D 511145 CDS NP_415410.1 16128857 945102 933224..937213 1 NC_000913.3 cell division protein; DNA translocase at septal ring sorting daughter chromsomes 937213 ftsK 945102 ftsK Escherichia coli str. K-12 substr. MG1655 DNA translocase at septal ring sorting daughter chromsomes NP_415410.1 933224 D 511145 CDS NP_415411.2 145698236 948989 937372..937983 1 NC_000913.3 periplasmic protein effects translocation of lipoproteins from inner membrane to outer; lipoprotein chaperone 937983 lolA 948989 lolA Escherichia coli str. K-12 substr. MG1655 lipoprotein chaperone NP_415411.2 937372 D 511145 CDS NP_415412.1 16128859 945505 937994..939337 1 NC_000913.3 putative polynucleotide enzyme; DNA-dependent ATPase involved in processing recombination intermediates at replication forks 939337 rarA 945505 rarA Escherichia coli str. K-12 substr. MG1655 DNA-dependent ATPase involved in processing recombination intermediates at replication forks NP_415412.1 937994 D 511145 CDS NP_415413.1 16128860 945506 939428..940720 1 NC_000913.3 serine tRNA synthetase; also charges selenocystein tRNA with serine; seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine 940720 serS 945506 serS Escherichia coli str. K-12 substr. MG1655 seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine NP_415413.1 939428 D 511145 CDS NP_415414.4 90111183 945508 940959..943403 1 NC_000913.3 anaerobic dimethyl sulfoxide reductase subunit A; dimethyl sulfoxide reductase, anaerobic, subunit A 943403 dmsA 945508 dmsA Escherichia coli str. K-12 substr. MG1655 dimethyl sulfoxide reductase, anaerobic, subunit A NP_415414.4 940959 D 511145 CDS NP_415415.1 16128862 945507 943414..944031 1 NC_000913.3 anaerobic dimethyl sulfoxide reductase subunit B; dimethyl sulfoxide reductase, anaerobic, subunit B 944031 dmsB 945507 dmsB Escherichia coli str. K-12 substr. MG1655 dimethyl sulfoxide reductase, anaerobic, subunit B NP_415415.1 943414 D 511145 CDS NP_415416.1 16128863 945502 944033..944896 1 NC_000913.3 anaerobic dimethyl sulfoxide reductase subunit C; dimethyl sulfoxide reductase, anaerobic, subunit C 944896 dmsC 945502 dmsC Escherichia coli str. K-12 substr. MG1655 dimethyl sulfoxide reductase, anaerobic, subunit C NP_415416.1 944033 D 511145 CDS NP_415417.1 16128864 945512 complement(944931..945557) 1 NC_000913.3 putative isochorismatase family hydrolase 945557 ycaC 945512 ycaC Escherichia coli str. K-12 substr. MG1655 putative isochorismatase family hydrolase NP_415417.1 944931 R 511145 CDS NP_415418.1 16128865 945515 945871..947019 1 NC_000913.3 putative MFS-type transporter 947019 ycaD 945515 ycaD Escherichia coli str. K-12 substr. MG1655 putative MFS-type transporter NP_415418.1 945871 D 511145 CDS NP_415419.2 90111184 945518 947229..948659 1 NC_000913.3 putative transporter 948659 ycaM 945518 ycaM Escherichia coli str. K-12 substr. MG1655 putative transporter NP_415419.2 947229 D 511145 CDS NP_415420.1 16128867 945523 complement(948660..949568) 1 NC_000913.3 putative transcriptional regulator LYSR-type; LysR family putative transcriptional regulator 949568 ycaN 945523 ycaN Escherichia coli str. K-12 substr. MG1655 LysR family putative transcriptional regulator NP_415420.1 948660 R 511145 CDS NP_415421.1 16128868 945520 949668..950258 1 NC_000913.3 putative NAD(P)H-dependent oxidoreductase 950258 ycaK 945520 ycaK Escherichia coli str. K-12 substr. MG1655 putative NAD(P)H-dependent oxidoreductase NP_415421.1 949668 D 511145 CDS NP_415422.1 16128869 945517 complement(950340..951080) 1 NC_000913.3 [formate-C-acetyltransferase 1]-activating enzyme; pyruvate formate-lyase 1-activating enzyme 951080 pflA 945517 pflA Escherichia coli str. K-12 substr. MG1655 [formate-C-acetyltransferase 1]-activating enzyme; pyruvate formate-lyase 1-activating enzyme NP_415422.1 950340 R 511145 CDS NP_415423.1 16128870 945514 complement(951272..953554) 1 NC_000913.3 formate acetyltransferase 1; formate C-acetyltransferase 1, anaerobic; pyruvate formate-lyase 1 953554 pflB 945514 pflB Escherichia coli str. K-12 substr. MG1655 formate C-acetyltransferase 1, anaerobic; pyruvate formate-lyase 1 NP_415423.1 951272 R 511145 CDS NP_415424.1 16128871 945513 complement(953609..954466) 1 NC_000913.3 probable formate transporter (formate channel 1); formate channel 954466 focA 945513 focA Escherichia coli str. K-12 substr. MG1655 formate channel NP_415424.1 953609 R 511145 CDS NP_415425.4 90111185 945509 complement(954872..956632) 1 NC_000913.3 ribosomal protein S12 methylthiotransferase accessory factor 956632 ycaO 945509 ycaO Escherichia coli str. K-12 substr. MG1655 ribosomal protein S12 methylthiotransferase accessory factor NP_415425.4 954872 R 511145 CDS NP_415426.1 16128873 945525 956762..957454 1 NC_000913.3 UPF0702 family putative inner membrane protein 957454 ycaP 945525 ycaP Escherichia coli str. K-12 substr. MG1655 UPF0702 family putative inner membrane protein NP_415426.1 956762 D 511145 CDS NP_415427.1 16128874 945527 957653..958741 1 NC_000913.3 3-phosphoserine aminotransferase; 3-phosphoserine/phosphohydroxythreonine aminotransferase 958741 serC 945527 serC Escherichia coli str. K-12 substr. MG1655 3-phosphoserine/phosphohydroxythreonine aminotransferase NP_415427.1 957653 D 511145 CDS NP_415428.1 16128875 945528 958812..960095 1 NC_000913.3 5-enolpyruvylshikimate-3-phosphate synthetase 960095 aroA 945528 aroA Escherichia coli str. K-12 substr. MG1655 5-enolpyruvylshikimate-3-phosphate synthetase NP_415428.1 958812 D 511145 CDS NP_415429.2 90111186 945534 960264..961028 1 NC_000913.3 putative heat shock protein; putative peptidase-related chaperone 961028 ycaL 945534 ycaL Escherichia coli str. K-12 substr. MG1655 putative peptidase-related chaperone NP_415429.2 960264 D 511145 CDS NP_415430.1 16128877 945535 961201..961884 1 NC_000913.3 cytidylate kinase 961884 cmk 945535 cmk Escherichia coli str. K-12 substr. MG1655 cytidylate kinase NP_415430.1 961201 D 511145 CDS NP_415431.1 16128878 945536 961995..963668 1 NC_000913.3 30S ribosomal subunit protein S1 963668 rpsA 945536 rpsA Escherichia coli str. K-12 substr. MG1655 30S ribosomal subunit protein S1 NP_415431.1 961995 D 511145 CDS NP_415432.1 16128879 945533 963828..964112 1 NC_000913.3 integration host factor (IHF), beta subunit; site-specific recombination; integration host factor (IHF), DNA-binding protein, beta subunit 964112 ihfB 945533 ihfB Escherichia coli str. K-12 substr. MG1655 integration host factor (IHF), DNA-binding protein, beta subunit NP_415432.1 963828 D 511145 CDS NP_415433.4 90111187 945531 964320..966584 1 NC_000913.3 ComEC family inner membrane protein 966584 ycaI 945531 ycaI Escherichia coli str. K-12 substr. MG1655 ComEC family inner membrane protein NP_415433.4 964320 D 511145 CDS NP_415434.1 16128881 945530 966621..968369 1 NC_000913.3 ATP-binding transport protein; multicopy suppressor of htrB; fused lipid transporter subunits of ABC superfamily: membrane component/ATP-binding component 968369 msbA 945530 msbA Escherichia coli str. K-12 substr. MG1655 fused lipid transporter subunits of ABC superfamily: membrane component/ATP-binding component NP_415434.1 966621 D 511145 CDS NP_415435.1 16128882 945526 968366..969352 1 NC_000913.3 lipid A 4'kinase 969352 lpxK 945526 lpxK Escherichia coli str. K-12 substr. MG1655 lipid A 4'kinase NP_415435.1 968366 D 511145 CDS NP_415436.1 16128883 945524 969389..970621 1 NC_000913.3 DUF1006 family protein with C-terminal wHTH domain 970621 ycaQ 945524 ycaQ Escherichia coli str. K-12 substr. MG1655 DUF1006 family protein with C-terminal wHTH domain NP_415436.1 969389 D 511145 CDS NP_415437.1 16128884 945537 970673..970855 1 NC_000913.3 peroxide and acid resistance protein, UPF0434 family 970855 ycaR 945537 ycaR Escherichia coli str. K-12 substr. MG1655 peroxide and acid resistance protein, UPF0434 family NP_415437.1 970673 D 511145 CDS NP_415438.1 16128885 945539 970852..971598 1 NC_000913.3 CTP:CMP-3-deoxy-D-manno-octulosonate transferase; 3-deoxy-manno-octulosonate cytidylyltransferase 971598 kdsB 945539 kdsB Escherichia coli str. K-12 substr. MG1655 3-deoxy-manno-octulosonate cytidylyltransferase NP_415438.1 970852 D 511145 CDS NP_415439.1 16128886 945545 971752..972645 1 NC_000913.3 protein kinase-like domain protein 972645 ycbJ 945545 ycbJ Escherichia coli str. K-12 substr. MG1655 protein kinase-like domain protein NP_415439.1 971752 D 511145 CDS NP_415440.1 16128887 945546 complement(972622..973401) 1 NC_000913.3 DUF218 superfamily protein 973401 ycbC 945546 ycbC Escherichia coli str. K-12 substr. MG1655 DUF218 superfamily protein NP_415440.1 972622 R 511145 CDS NP_415441.1 16128888 945547 973537..974322 1 NC_000913.3 S-adenosylmethionine-dependent methyltransferase; putative S-adenosyl-L-methionine-dependent methyltransferase 974322 smtA 945547 smtA Escherichia coli str. K-12 substr. MG1655 putative S-adenosyl-L-methionine-dependent methyltransferase NP_415441.1 973537 D 511145 CDS NP_415442.1 16128889 945548 974319..975641 1 NC_000913.3 mukF protein (killing factor KICB); chromosome condensin MukBEF, kleisin-like subunit, binds calcium 975641 mukF 945548 mukF Escherichia coli str. K-12 substr. MG1655 chromosome condensin MukBEF, kleisin-like subunit, binds calcium NP_415442.1 974319 D 511145 CDS NP_415443.2 226524705 945550 975622..976326 1 NC_000913.3 chromosome condensin MukBEF, MukE localization factor 976326 mukE 945550 mukE Escherichia coli str. K-12 substr. MG1655 chromosome condensin MukBEF, MukE localization factor NP_415443.2 975622 D 511145 CDS NP_415444.1 16128891 945549 976326..980786 1 NC_000913.3 kinesin-like cell division protein involved in chromosome partitioning; chromosome condensin MukBEF, ATPase and DNA-binding subunit 980786 mukB 945549 mukB Escherichia coli str. K-12 substr. MG1655 chromosome condensin MukBEF, ATPase and DNA-binding subunit NP_415444.1 976326 D 511145 CDS NP_415445.1 16128892 945541 981047..982894 1 NC_000913.3 putative amidase; murein L,D-transpeptidase 982894 ldtD 945541 ldtD Escherichia coli str. K-12 substr. MG1655 murein L,D-transpeptidase NP_415445.1 981047 D 511145 CDS NP_415446.1 16128893 945538 983075..983623 1 NC_000913.3 M15A protease-related family periplasmic protein 983623 ycbK 945538 ycbK Escherichia coli str. K-12 substr. MG1655 M15A protease-related family periplasmic protein NP_415446.1 983075 D 511145 CDS NP_415447.1 16128894 945551 983650..984297 1 NC_000913.3 putative metal-binding enzyme 984297 ycbL 945551 ycbL Escherichia coli str. K-12 substr. MG1655 putative metal-binding enzyme NP_415447.1 983650 D 511145 CDS NP_415448.1 16128895 945553 complement(984519..985709) 1 NC_000913.3 aspartate aminotransferase; aspartate aminotransferase, PLP-dependent 985709 aspC 945553 aspC Escherichia coli str. K-12 substr. MG1655 aspartate aminotransferase, PLP-dependent NP_415448.1 984519 R 511145 CDS NP_415449.1 16128896 945554 complement(985894..986982) 1 NC_000913.3 outer membrane protein 1a (Ia;b;F); outer membrane porin 1a (Ia;b;F) 986982 ompF 945554 ompF Escherichia coli str. K-12 substr. MG1655 outer membrane porin 1a (Ia;b;F) NP_415449.1 985894 R 511145 CDS NP_415450.1 16128897 945555 complement(987585..988985) 1 NC_000913.3 asparagine tRNA synthetase; asparaginyl tRNA synthetase 988985 asnS 945555 asnS Escherichia coli str. K-12 substr. MG1655 asparaginyl tRNA synthetase NP_415450.1 987585 R 511145 CDS NP_415451.1 16128898 946648 complement(989154..990356) 1 NC_000913.3 nicotinate phosphoribosyltransferase 990356 pncB 946648 pncB Escherichia coli str. K-12 substr. MG1655 nicotinate phosphoribosyltransferase NP_415451.1 989154 R 511145 CDS NP_415452.1 16128899 947253 990622..993234 1 NC_000913.3 aminopeptidase N 993234 pepN 947253 pepN Escherichia coli str. K-12 substr. MG1655 aminopeptidase N NP_415452.1 990622 D 511145 CDS NP_415453.1 16128900 947220 complement(993277..994044) 1 NC_000913.3 ATP-binding component of ABC superfamily; alkanesulfonate transporter subunit 994044 ssuB 947220 ssuB Escherichia coli str. K-12 substr. MG1655 alkanesulfonate transporter subunit NP_415453.1 993277 R 511145 CDS NP_415454.4 90111188 947216 complement(994041..994832) 1 NC_000913.3 membrane component of ABC superfamily; putative alkanesulfonate transporter subunit 994832 ssuC 947216 ssuC Escherichia coli str. K-12 substr. MG1655 putative alkanesulfonate transporter subunit NP_415454.4 994041 R 511145 CDS NP_415455.1 16128902 945557 complement(994843..995988) 1 NC_000913.3 alkanesulfonate monooxygenase, FMNH(2)-dependent 995988 ssuD 945557 ssuD Escherichia coli str. K-12 substr. MG1655 alkanesulfonate monooxygenase, FMNH(2)-dependent NP_415455.1 994843 R 511145 CDS NP_415456.4 90111189 945560 complement(995985..996944) 1 NC_000913.3 periplasmic-binding component of ABC superfamily; aliphatic sulfonate binding protein, SsuABC ABC transporter 996944 ssuA 945560 ssuA Escherichia coli str. K-12 substr. MG1655 aliphatic sulfonate binding protein, SsuABC ABC transporter NP_415456.4 995985 R 511145 CDS NP_415457.1 16128904 945947 complement(996937..997512) 1 NC_000913.3 NAD(P)H-dependent FMN reductase 997512 ssuE 945947 ssuE Escherichia coli str. K-12 substr. MG1655 NAD(P)H-dependent FMN reductase NP_415457.1 996937 R 511145 CDS NP_415458.2 90111190 948306 997868..998407 1 NC_000913.3 putative fimbrial-like protein; laminin-binding fimbrin subunit 998407 elfA 948306 elfA Escherichia coli str. K-12 substr. MG1655 laminin-binding fimbrin subunit NP_415458.2 997868 D 511145 CDS NP_415459.1 16128906 946773 998490..999191 1 NC_000913.3 putative periplasmic pilin chaperone 999191 elfD 946773 elfD Escherichia coli str. K-12 substr. MG1655 putative periplasmic pilin chaperone NP_415459.1 998490 D 511145 CDS NP_415460.1 16128907 946934 999216..1001816 1 NC_000913.3 putative outer membrane fimbrial subunit export usher protein 1001816 elfC 946934 elfC Escherichia coli str. K-12 substr. MG1655 putative outer membrane fimbrial subunit export usher protein NP_415460.1 999216 D 511145 CDS NP_415461.1 16128908 947185 1001807..1002877 1 NC_000913.3 putative fimbrial-like adhesin protein 1002877 elfG 947185 elfG Escherichia coli str. K-12 substr. MG1655 putative fimbrial-like adhesin protein NP_415461.1 1001807 D 511145 CDS NP_415462.1 16128909 945561 1002889..1003431 1 NC_000913.3 putative fimbrial-like protein; putative fimbriae protein 1003431 ycbU 945561 ycbU Escherichia coli str. K-12 substr. MG1655 putative fimbriae protein NP_415462.1 1002889 D 511145 CDS NP_415463.2 90111191 945562 1003439..1003954 1 NC_000913.3 putative fimbrial-like protein; putative fimbrial-like adhesin protein 1003954 ycbV 945562 ycbV Escherichia coli str. K-12 substr. MG1655 putative fimbrial-like adhesin protein NP_415463.2 1003439 D 511145 CDS NP_415464.4 90111192 945559 1003947..1004657 1 NC_000913.3 putative periplasmic pilin chaperone 1004657 ycbF 945559 ycbF Escherichia coli str. K-12 substr. MG1655 putative periplasmic pilin chaperone NP_415464.4 1003947 D 511145 CDS NP_415465.1 16128912 945556 1004768..1005778 1 NC_000913.3 dihydro-orotate dehydrogenase; dihydro-orotate oxidase, FMN-linked 1005778 pyrD 945556 pyrD Escherichia coli str. K-12 substr. MG1655 dihydro-orotate oxidase, FMN-linked NP_415465.1 1004768 D 511145 CDS NP_415466.4 90111193 945552 1005952..1006494 1 NC_000913.3 FtsZ stabilizer 1006494 zapC 945552 zapC Escherichia coli str. K-12 substr. MG1655 FtsZ stabilizer NP_415466.4 1005952 D 511145 CDS NP_415467.1 16128914 945563 complement(1006491..1007600) 1 NC_000913.3 6-N-hydroxylaminopurine detoxification oxidoreductase 1007600 ycbX 945563 ycbX Escherichia coli str. K-12 substr. MG1655 6-N-hydroxylaminopurine detoxification oxidoreductase NP_415467.1 1006491 R 511145 CDS NP_415468.1 16128915 945564 1007844..1009952 1 NC_000913.3 putative oxidoreductase; fused 23S rRNA m(2)G2445 and m(7)G2069 methyltransferase, SAM-dependent 1009952 rlmL 945564 rlmL Escherichia coli str. K-12 substr. MG1655 fused 23S rRNA m(2)G2445 and m(7)G2069 methyltransferase, SAM-dependent NP_415468.1 1007844 D 511145 CDS NP_415469.1 16128916 945566 1009964..1011871 1 NC_000913.3 putative ATP-binding component of a transport system; putative transporter subunit of ABC superfamily: ATP-binding component 1011871 uup 945566 uup Escherichia coli str. K-12 substr. MG1655 putative transporter subunit of ABC superfamily: ATP-binding component NP_415469.1 1009964 D 511145 CDS NP_415470.1 16128917 944999 1012001..1013254 1 NC_000913.3 paraquat-inducible protein A; paraquat-inducible, SoxRS-regulated inner membrane protein 1013254 pqiA 944999 pqiA Escherichia coli str. K-12 substr. MG1655 paraquat-inducible, SoxRS-regulated inner membrane protein NP_415470.1 1012001 D 511145 CDS NP_415471.1 16128918 945653 1013259..1014899 1 NC_000913.3 paraquat-inducible, SoxRS-regulated MCE domain protein 1014899 pqiB 945653 pqiB Escherichia coli str. K-12 substr. MG1655 paraquat-inducible, SoxRS-regulated MCE domain protein NP_415471.1 1013259 D 511145 CDS NP_415472.2 145698237 946972 1014896..1015459 1 NC_000913.3 DUF330 family putative lipoprotein 1015459 pqiC 946972 pqiC Escherichia coli str. K-12 substr. MG1655 DUF330 family putative lipoprotein NP_415472.2 1014896 D 511145 CDS NP_415473.1 16128920 945567 1015715..1015882 1 NC_000913.3 ribosome modulation factor 1015882 rmf 945567 rmf Escherichia coli str. K-12 substr. MG1655 ribosome modulation factor NP_415473.1 1015715 D 511145 CDS NP_415474.1 16128921 945568 complement(1015952..1016470) 1 NC_000913.3 beta-hydroxydecanoyl thioester dehydrase, trans-2-decenoyl-ACP isomerase; beta-hydroxydecanoyl thioester dehydrase 1016470 fabA 945568 fabA Escherichia coli str. K-12 substr. MG1655 beta-hydroxydecanoyl thioester dehydrase NP_415474.1 1015952 R 511145 CDS NP_415475.1 16128922 945569 complement(1016539..1018299) 1 NC_000913.3 putative ATP-dependent protease; putative peptidase 1018299 ycbZ 945569 ycbZ Escherichia coli str. K-12 substr. MG1655 putative peptidase NP_415475.1 1016539 R 511145 CDS NP_415476.1 16128923 945570 1018485..1018937 1 NC_000913.3 putative dehydrogenase; Ter macrodomain organizer matS-binding protein 1018937 matP 945570 matP Escherichia coli str. K-12 substr. MG1655 Ter macrodomain organizer matS-binding protein NP_415476.1 1018485 D 511145 CDS NP_415477.1 16128924 945571 complement(1019013..1020053) 1 NC_000913.3 outer membrane protein 3a (II*;G;d); outer membrane protein A (3a;II*;G;d) 1020053 ompA 945571 ompA Escherichia coli str. K-12 substr. MG1655 outer membrane protein A (3a;II*;G;d) NP_415477.1 1019013 R 511145 CDS NP_415478.1 16128925 947335 complement(1020410..1020919) 1 NC_000913.3 suppressor of lon; inhibits cell division and ftsZ ring formation; SOS cell division inhibitor 1020919 sulA 947335 sulA Escherichia coli str. K-12 substr. MG1655 SOS cell division inhibitor NP_415478.1 1020410 R 511145 CDS NP_415479.1 16128926 946504 1021138..1021767 1 NC_000913.3 CRP-S-dependent promoter expression factor 1021767 sxy 946504 sxy Escherichia coli str. K-12 substr. MG1655 CRP-S-dependent promoter expression factor NP_415479.1 1021138 D 511145 CDS NP_415480.2 90111194 947001 complement(1021730..1023883) 1 NC_000913.3 putative transporter, FUSC superfamily inner membrane protein, tandem domains 1023883 yccS 947001 yccS Escherichia coli str. K-12 substr. MG1655 putative transporter, FUSC superfamily inner membrane protein, tandem domains NP_415480.2 1021730 R 511145 CDS NP_415481.1 16128928 945594 complement(1023902..1024348) 1 NC_000913.3 DUF307 family inner membrane protein 1024348 yccF 945594 yccF Escherichia coli str. K-12 substr. MG1655 DUF307 family inner membrane protein NP_415481.1 1023902 R 511145 CDS NP_415482.1 16128929 946227 1024471..1026525 1 NC_000913.3 DNA helicase IV 1026525 helD 946227 helD Escherichia coli str. K-12 substr. MG1655 DNA helicase IV NP_415482.1 1024471 D 511145 CDS NP_415483.2 90111195 945574 complement(1026557..1027015) 1 NC_000913.3 methylglyoxal synthase 1027015 mgsA 945574 mgsA Escherichia coli str. K-12 substr. MG1655 methylglyoxal synthase NP_415483.2 1026557 R 511145 CDS NP_415484.1 16128931 945577 complement(1027111..1027773) 1 NC_000913.3 UPF0319 family protein 1027773 yccT 945577 yccT Escherichia coli str. K-12 substr. MG1655 UPF0319 family protein NP_415484.1 1027111 R 511145 CDS NP_415485.4 90111196 949008 1027946..1028359 1 NC_000913.3 putative CoA-binding protein 1028359 yccU 949008 yccU Escherichia coli str. K-12 substr. MG1655 putative CoA-binding protein NP_415485.4 1027946 D 511145 CDS NP_415486.4 145698238 945578 complement(1028404..1028721) 1 NC_000913.3 heat shock protein involved in degradation of mutant DnaA; hemimethylated oriC DNA-binding protein 1028721 hspQ 945578 hspQ Escherichia coli str. K-12 substr. MG1655 heat shock protein involved in degradation of mutant DnaA; hemimethylated oriC DNA-binding protein NP_415486.4 1028404 R 511145 CDS NP_415487.4 145698239 946691 complement(1028779..1029969) 1 NC_000913.3 putative oxidoreductase; 23S rRNA m(5)C1962 methyltransferase, SAM-dependent 1029969 rlmI 946691 rlmI Escherichia coli str. K-12 substr. MG1655 23S rRNA m(5)C1962 methyltransferase, SAM-dependent NP_415487.4 1028779 R 511145 CDS NP_415488.1 16128935 945304 1030064..1030342 1 NC_000913.3 weak acylphosphatase 1030342 yccX 945304 yccX Escherichia coli str. K-12 substr. MG1655 weak acylphosphatase NP_415488.1 1030064 D 511145 CDS NP_415489.4 90111197 945023 complement(1030339..1030668) 1 NC_000913.3 putative sulfite reductase; mnm(5)-s(2)U34-tRNA 2-thiolation sulfurtransferase 1030668 tusE 945023 tusE Escherichia coli str. K-12 substr. MG1655 mnm(5)-s(2)U34-tRNA 2-thiolation sulfurtransferase NP_415489.4 1030339 R 511145 CDS NP_415490.1 16128937 946016 complement(1030759..1031418) 1 NC_000913.3 putative carrier/transport protein; HflBKC-binding inner membrane protein, UPF0005 family 1031418 yccA 946016 yccA Escherichia coli str. K-12 substr. MG1655 HflBKC-binding inner membrane protein, UPF0005 family NP_415490.1 1030759 R 511145 CDS NP_415491.1 16128938 945579 1032139..1033257 1 NC_000913.3 hydrogenase-1 small subunit; hydrogenase 1, small subunit 1033257 hyaA 945579 hyaA Escherichia coli str. K-12 substr. MG1655 hydrogenase 1, small subunit NP_415491.1 1032139 D 511145 CDS NP_415492.1 16128939 945580 1033254..1035047 1 NC_000913.3 hydrogenase-1 large subunit; hydrogenase 1, large subunit 1035047 hyaB 945580 hyaB Escherichia coli str. K-12 substr. MG1655 hydrogenase 1, large subunit NP_415492.1 1033254 D 511145 CDS NP_415493.1 16128940 945581 1035066..1035773 1 NC_000913.3 probable Ni/Fe-hydrogenase 1 b-type cytochrome subunit; hydrogenase 1, b-type cytochrome subunit 1035773 hyaC 945581 hyaC Escherichia coli str. K-12 substr. MG1655 hydrogenase 1, b-type cytochrome subunit NP_415493.1 1035066 D 511145 CDS NP_415494.1 16128941 945575 1035770..1036357 1 NC_000913.3 processing of HyaA and HyaB proteins; hydrogenase 1 maturation protease 1036357 hyaD 945575 hyaD Escherichia coli str. K-12 substr. MG1655 hydrogenase 1 maturation protease NP_415494.1 1035770 D 511145 CDS NP_415495.1 16128942 945573 1036354..1036752 1 NC_000913.3 processing of HyaA and HyaB proteins; putative HyaA chaperone 1036752 hyaE 945573 hyaE Escherichia coli str. K-12 substr. MG1655 putative HyaA chaperone NP_415495.1 1036354 D 511145 CDS NP_415496.1 16128943 945572 1036749..1037606 1 NC_000913.3 nickel incorporation into hydrogenase-1 proteins; protein involved in nickel incorporation into hydrogenase-1 proteins 1037606 hyaF 945572 hyaF Escherichia coli str. K-12 substr. MG1655 protein involved in nickel incorporation into hydrogenase-1 proteins NP_415496.1 1036749 D 511145 CDS NP_415497.1 16128944 945585 1037740..1039284 1 NC_000913.3 cytochrome bd-II oxidase, subunit I 1039284 cbdA 945585 cbdA Escherichia coli str. K-12 substr. MG1655 cytochrome bd-II oxidase, subunit I NP_415497.1 1037740 D 511145 CDS NP_415498.1 16128945 947547 1039296..1040432 1 NC_000913.3 probable third cytochrome oxidase, subunit II; cytochrome bd-II oxidase, subunit II 1040432 cbdB 947547 cbdB Escherichia coli str. K-12 substr. MG1655 cytochrome bd-II oxidase, subunit II NP_415498.1 1039296 D 511145 CDS YP_001165313.1 145698240 948955 1040445..1040537 1 NC_000913.3 putative cytochrome bd-II oxidase subunit 1040537 cbdX 948955 cbdX Escherichia coli str. K-12 substr. MG1655 putative cytochrome bd-II oxidase subunit YP_001165313.1 1040445 D 511145 CDS NP_415500.1 16128946 946206 1040617..1041915 1 NC_000913.3 phosphoanhydride phosphorylase; pH 2.5 acid phosphatase; periplasmic; phosphoanhydride phosphorylase 1041915 appA 946206 appA Escherichia coli str. K-12 substr. MG1655 phosphoanhydride phosphorylase NP_415500.1 1040617 D 511145 CDS NP_415501.1 16128947 947409 complement(1042030..1044210) 1 NC_000913.3 tyrosine-protein kinase, role in O-antigen capsule formation 1044210 etk 947409 etk Escherichia coli str. K-12 substr. MG1655 tyrosine-protein kinase, role in O-antigen capsule formation NP_415501.1 1042030 R 511145 CDS NP_415502.4 90111198 945236 complement(1044230..1044676) 1 NC_000913.3 putative phosphatase; Protein-tyrosine-phosphatase, role in O-antigen capsule formation; dephosphorylates Etk-P 1044676 etp 945236 etp Escherichia coli str. K-12 substr. MG1655 Protein-tyrosine-phosphatase, role in O-antigen capsule formation; dephosphorylates Etk-P NP_415502.4 1044230 R 511145 CDS NP_415503.1 16128949 945586 complement(1044664..1045803) 1 NC_000913.3 putative function in exopolysaccharide production; putative O-antigen capsule outer membrane auxillary protein export channel 1045803 gfcE 945586 gfcE Escherichia coli str. K-12 substr. MG1655 putative O-antigen capsule outer membrane auxillary protein export channel NP_415503.1 1044664 R 511145 CDS NP_415504.1 16128950 945588 complement(1045849..1047945) 1 NC_000913.3 putative O-antigen capsule production periplasmic protein 1047945 gfcD 945588 gfcD Escherichia coli str. K-12 substr. MG1655 putative O-antigen capsule production periplasmic protein NP_415504.1 1045849 R 511145 CDS NP_415505.1 16128951 944978 complement(1047945..1048691) 1 NC_000913.3 putative O-antigen capsule production periplasmic protein 1048691 gfcC 944978 gfcC Escherichia coli str. K-12 substr. MG1655 putative O-antigen capsule production periplasmic protein NP_415505.1 1047945 R 511145 CDS NP_415506.1 16128952 949118 complement(1048688..1049332) 1 NC_000913.3 putative regulator; O-antigen capsule production lipoprotein 1049332 gfcB 949118 gfcB Escherichia coli str. K-12 substr. MG1655 O-antigen capsule production lipoprotein NP_415506.1 1048688 R 511145 CDS NP_415507.2 90111199 945029 complement(1049439..1049744) 1 NC_000913.3 O-antigen capsule production threonine-rich inner membrane protein 1049744 gfcA 945029 gfcA Escherichia coli str. K-12 substr. MG1655 O-antigen capsule production threonine-rich inner membrane protein NP_415507.2 1049439 R 511145 CDS YP_588445.1 94541103 1450250 1049833..1050108 1 NC_000913.3 IS1 repressor TnpA 1050108 insA 1450250 insA Escherichia coli str. K-12 substr. MG1655 IS1 repressor TnpA YP_588445.1 1049833 D 511145 CDS NP_415508.1 16128954 945009 1050027..1050530 1 NC_000913.3 IS1 transposase B 1050530 insB1 945009 insB1 Escherichia coli str. K-12 substr. MG1655 IS1 transposase B NP_415508.1 1050027 D 511145 CDS NP_415509.1 16128955 945590 complement(1050963..1051175) 1 NC_000913.3 cold shock-like protein; stress protein, member of the CspA-family 1051175 cspH 945590 cspH Escherichia coli str. K-12 substr. MG1655 stress protein, member of the CspA-family NP_415509.1 1050963 R 511145 CDS NP_415510.1 16128956 945591 1051461..1051673 1 NC_000913.3 homolog of Salmonella cold shock protein; cold shock protein homolog, cold-inducible 1051673 cspG 945591 cspG Escherichia coli str. K-12 substr. MG1655 cold shock protein homolog, cold-inducible NP_415510.1 1051461 D 511145 CDS NP_415511.1 16128957 946951 1051847..1052077 1 NC_000913.3 suppresses fabA and ts growth mutation; cold shock gene 1052077 ymcE 946951 ymcE Escherichia coli str. K-12 substr. MG1655 cold shock gene NP_415511.1 1051847 D 511145 CDS YP_588446.1 94541104 1450249 1052067..1052240 1 NC_000913.3 putative phosphatidylethanolamine synthesis regulator 1052240 gnsA 1450249 gnsA Escherichia coli str. K-12 substr. MG1655 putative phosphatidylethanolamine synthesis regulator YP_588446.1 1052067 D 511145 CDS NP_415512.1 16128958 946295 complement(1052289..1053362) 1 NC_000913.3 putative 4Fe-4S membrane protein 1053362 yccM 946295 yccM Escherichia coli str. K-12 substr. MG1655 putative 4Fe-4S membrane protein NP_415512.1 1052289 R 511145 CDS NP_415513.2 90111200 945595 complement(1053434..1056178) 1 NC_000913.3 hybrid sensory histidine kinase in two-component regulatory system with TorR 1056178 torS 945595 torS Escherichia coli str. K-12 substr. MG1655 hybrid sensory histidine kinase in two-component regulatory system with TorR NP_415513.2 1053434 R 511145 CDS NP_415514.1 16128960 946289 1056261..1057289 1 NC_000913.3 part of regulation of tor operon, periplasmic; periplasmic sensory protein associated with the TorRS two-component regulatory system 1057289 torT 946289 torT Escherichia coli str. K-12 substr. MG1655 periplasmic sensory protein associated with the TorRS two-component regulatory system NP_415514.1 1056261 D 511145 CDS NP_415515.1 16128961 946182 complement(1057262..1057954) 1 NC_000913.3 response transcriptional regulator for torA (sensor TorS); response regulator in two-component regulatory system with TorS 1057954 torR 946182 torR Escherichia coli str. K-12 substr. MG1655 response regulator in two-component regulatory system with TorS NP_415515.1 1057262 R 511145 CDS NP_415516.1 16128962 946252 1058084..1059256 1 NC_000913.3 trimethylamine N-oxide reductase, cytochrome c-type subunit; trimethylamine N-oxide (TMAO) reductase I, cytochrome c-type subunit 1059256 torC 946252 torC Escherichia coli str. K-12 substr. MG1655 trimethylamine N-oxide (TMAO) reductase I, cytochrome c-type subunit NP_415516.1 1058084 D 511145 CDS NP_415517.1 16128963 946267 1059256..1061802 1 NC_000913.3 trimethylamine N-oxide reductase subunit; trimethylamine N-oxide (TMAO) reductase I, catalytic subunit 1061802 torA 946267 torA Escherichia coli str. K-12 substr. MG1655 trimethylamine N-oxide (TMAO) reductase I, catalytic subunit NP_415517.1 1059256 D 511145 CDS NP_415518.1 16128964 945625 1061799..1062398 1 NC_000913.3 part of trimethylamine-N-oxide oxidoreductase; TorA-maturation chaperone 1062398 torD 945625 torD Escherichia coli str. K-12 substr. MG1655 TorA-maturation chaperone NP_415518.1 1061799 D 511145 CDS NP_415519.1 16128965 945597 complement(1062550..1062855) 1 NC_000913.3 modulator of CbpA co-chaperone 1062855 cbpM 945597 cbpM Escherichia coli str. K-12 substr. MG1655 modulator of CbpA co-chaperone NP_415519.1 1062550 R 511145 CDS NP_415520.1 16128966 947572 complement(1062855..1063775) 1 NC_000913.3 curved DNA-binding protein; functions closely related to DnaJ; DnaK co-chaperone; curved DNA-binding protein 1063775 cbpA 947572 cbpA Escherichia coli str. K-12 substr. MG1655 DnaK co-chaperone; curved DNA-binding protein NP_415520.1 1062855 R 511145 CDS NP_415521.1 16128967 947468 1064036..1065292 1 NC_000913.3 uncharacterized protein 1065292 yccE 947468 yccE Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_415521.1 1064036 D 511145 CDS NP_415522.1 16128968 945773 1065585..1066826 1 NC_000913.3 periplasmic glucose-1-phosphatase; glucose-1-phosphatase/inositol phosphatase 1066826 agp 945773 agp Escherichia coli str. K-12 substr. MG1655 glucose-1-phosphatase/inositol phosphatase NP_415522.1 1065585 D 511145 CDS NP_415523.1 16128969 948930 complement(1066864..1067091) 1 NC_000913.3 uncharacterized protein 1067091 yccJ 948930 yccJ Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_415523.1 1066864 R 511145 CDS NP_415524.1 16128970 947263 complement(1067112..1067708) 1 NC_000913.3 flavoprotein WrbA (Trp repressor binding protein); NAD(P)H:quinone oxidoreductase 1067708 wrbA 947263 wrbA Escherichia coli str. K-12 substr. MG1655 NAD(P)H:quinone oxidoreductase NP_415524.1 1067112 R 511145 CDS NP_415525.2 94541090 945598 1068081..1068254 1 NC_000913.3 KGG family protein 1068254 ymdF 945598 ymdF Escherichia coli str. K-12 substr. MG1655 KGG family protein NP_415525.2 1068081 D 511145 CDS NP_415526.4 90111201 946589 complement(1068511..1069839) 1 NC_000913.3 putative transport protein; pyrimidine permease 1069839 rutG 946589 rutG Escherichia coli str. K-12 substr. MG1655 pyrimidine permease NP_415526.4 1068511 R 511145 CDS NP_415527.4 90111202 946594 complement(1069860..1070354) 1 NC_000913.3 flavin:NADH reductase 1070354 rutF 946594 rutF Escherichia coli str. K-12 substr. MG1655 flavin:NADH reductase NP_415527.4 1069860 R 511145 CDS NP_415528.1 16128974 946591 complement(1070365..1070955) 1 NC_000913.3 putative malonic semialdehyde reductase 1070955 rutE 946591 rutE Escherichia coli str. K-12 substr. MG1655 putative malonic semialdehyde reductase NP_415528.1 1070365 R 511145 CDS NP_415529.1 16128975 946586 complement(1070965..1071765) 1 NC_000913.3 putative aminoacrylate hydrolase, reactive intermediate detoxification 1071765 rutD 946586 rutD Escherichia coli str. K-12 substr. MG1655 putative aminoacrylate hydrolase, reactive intermediate detoxification NP_415529.1 1070965 R 511145 CDS NP_415530.1 16128976 945599 complement(1071773..1072159) 1 NC_000913.3 putative aminoacrylate deaminase, reactive intermediate detoxification; weak enamine/imine deaminase activity 1072159 rutC 945599 rutC Escherichia coli str. K-12 substr. MG1655 putative aminoacrylate deaminase, reactive intermediate detoxification; weak enamine/imine deaminase activity NP_415530.1 1071773 R 511145 CDS NP_415531.2 90111203 945699 complement(1072171..1072863) 1 NC_000913.3 ureidoacrylate amidohydrolase 1072863 rutB 945699 rutB Escherichia coli str. K-12 substr. MG1655 ureidoacrylate amidohydrolase NP_415531.2 1072171 R 511145 CDS NP_415532.3 49176071 945643 complement(1072863..1074011) 1 NC_000913.3 pyrimidine oxygenase, FMN-dependent 1074011 rutA 945643 rutA Escherichia coli str. K-12 substr. MG1655 pyrimidine oxygenase, FMN-dependent NP_415532.3 1072863 R 511145 CDS NP_415533.1 16128979 945075 1074242..1074880 1 NC_000913.3 hypothetical transcriptional regulator; rut operon transcriptional repressor for 1074880 rutR 945075 rutR Escherichia coli str. K-12 substr. MG1655 rut operon transcriptional repressor for NP_415533.1 1074242 D 511145 CDS NP_415534.1 16128980 945600 complement(1074920..1078882) 1 NC_000913.3 proline dehydrogenase, P5C dehydrogenase; fused DNA-binding transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 1078882 putA 945600 putA Escherichia coli str. K-12 substr. MG1655 fused DNA-binding transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase NP_415534.1 1074920 R 511145 CDS NP_415535.1 16128981 945602 1079305..1080813 1 NC_000913.3 major sodium/proline symporter; proline:sodium symporter 1080813 putP 945602 putP Escherichia coli str. K-12 substr. MG1655 proline:sodium symporter NP_415535.1 1079305 D 511145 CDS b4490 948956 join(1081356..1081460,1081460..1082185) 1 NC_000913.3 ferrous iron permease (pseudogene); <NULL_VALUE> 1082185 efeU 948956 efeU Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 1081356 D 511145 CDS NP_415537.1 16128982 945603 1082243..1083370 1 NC_000913.3 inactive ferrous ion transporter EfeUOB 1083370 efeO 945603 efeO Escherichia coli str. K-12 substr. MG1655 inactive ferrous ion transporter EfeUOB NP_415537.1 1082243 D 511145 CDS NP_415538.1 16128983 946500 1083376..1084647 1 NC_000913.3 deferrrochelatase, periplasmic 1084647 efeB 946500 efeB Escherichia coli str. K-12 substr. MG1655 deferrrochelatase, periplasmic NP_415538.1 1083376 D 511145 CDS NP_415539.1 16128984 948010 1084992..1086056 1 NC_000913.3 PhoB-dependent, ATP-binding pho regulon component; may be helicase; induced by P starvation; ATP-binding protein; putative PhoH family P-loop ATPase 1086056 phoH 948010 phoH Escherichia coli str. K-12 substr. MG1655 ATP-binding protein; putative PhoH family P-loop ATPase NP_415539.1 1084992 D 511145 CDS NP_415540.1 16128985 947503 complement(1086106..1086519) 1 NC_000913.3 biofilm PGA synthase PgaCD, regulatory subunit; c-di-GMP-stimulated activity and dimerization 1086519 pgaD 947503 pgaD Escherichia coli str. K-12 substr. MG1655 biofilm PGA synthase PgaCD, regulatory subunit; c-di-GMP-stimulated activity and dimerization NP_415540.1 1086106 R 511145 CDS NP_415541.1 16128986 945606 complement(1086521..1087846) 1 NC_000913.3 biofilm PGA synthase PgaCD, catalytic subunit; poly-beta-1,6-N-acetyl-D-glucosamine synthase; c-di-GMP-stimulated activity and dimerization 1087846 pgaC 945606 pgaC Escherichia coli str. K-12 substr. MG1655 biofilm PGA synthase PgaCD, catalytic subunit; poly-beta-1,6-N-acetyl-D-glucosamine synthase; c-di-GMP-stimulated activity and dimerization NP_415541.1 1086521 R 511145 CDS NP_415542.1 16128987 945604 complement(1087839..1089857) 1 NC_000913.3 poly-beta-1,6-N-acetyl-D-glucosamine (PGA) N-deacetylase outer membrane export lipoprotein 1089857 pgaB 945604 pgaB Escherichia coli str. K-12 substr. MG1655 poly-beta-1,6-N-acetyl-D-glucosamine (PGA) N-deacetylase outer membrane export lipoprotein NP_415542.1 1087839 R 511145 CDS NP_415543.1 16128988 945596 complement(1089866..1092289) 1 NC_000913.3 putative outer membrane protein; biofilm adhesin polysaccharide PGA secretin; OM porin; poly-beta-1,6-N-acetyl-D-glucosamine export protein 1092289 pgaA 945596 pgaA Escherichia coli str. K-12 substr. MG1655 biofilm adhesin polysaccharide PGA secretin; OM porin; poly-beta-1,6-N-acetyl-D-glucosamine export protein NP_415543.1 1089866 R 511145 CDS NP_415544.1 16128989 945593 1092876..1094234 1 NC_000913.3 diguanylate cyclase, membrane-anchored 1094234 ycdT 945593 ycdT Escherichia coli str. K-12 substr. MG1655 diguanylate cyclase, membrane-anchored NP_415544.1 1092876 D 511145 CDS NP_415545.1 16128990 945587 complement(1094275..1095141) 1 NC_000913.3 IS3 transposase B 1095141 insF1 945587 insF1 Escherichia coli str. K-12 substr. MG1655 IS3 transposase B NP_415545.1 1094275 R 511145 CDS NP_415546.2 226524706 945584 complement(1095138..1095437) 1 NC_000913.3 IS3 transposase A 1095437 insE1 945584 insE1 Escherichia coli str. K-12 substr. MG1655 IS3 transposase A NP_415546.2 1095138 R 511145 CDS b1028 945589 1095505..1095846 1 NC_000913.3 pseudogene; <NULL_VALUE> 1095846 ymdE 945589 ymdE Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 1095505 D 511145 CDS NP_415548.1 16128993 945592 1095843..1096829 1 NC_000913.3 putative inner membrane protein 1096829 ycdU 945592 ycdU Escherichia coli str. K-12 substr. MG1655 putative inner membrane protein NP_415548.1 1095843 D 511145 CDS NP_415551.2 90111205 946431 1097886..1098824 1 NC_000913.3 putative dehydrogenase; glyoxylate/hydroxypyruvate reductase A 1098824 ghrA 946431 ghrA Escherichia coli str. K-12 substr. MG1655 glyoxylate/hydroxypyruvate reductase A NP_415551.2 1097886 D 511145 CDS NP_415552.1 16128997 948477 1098879..1099616 1 NC_000913.3 alkaline phosphatase 1099616 ycdX 948477 ycdX Escherichia coli str. K-12 substr. MG1655 alkaline phosphatase NP_415552.1 1098879 D 511145 CDS NP_415553.1 16128998 945609 1099640..1100194 1 NC_000913.3 putative oxidoreductase component; redox enzyme maturation protein (REMP) chaperone for YcdX 1100194 ycdY 945609 ycdY Escherichia coli str. K-12 substr. MG1655 redox enzyme maturation protein (REMP) chaperone for YcdX NP_415553.1 1099640 D 511145 CDS NP_415554.4 90111206 945617 1100296..1100787 1 NC_000913.3 DUF1097 family inner membrane protein 1100787 ycdZ 945617 ycdZ Escherichia coli str. K-12 substr. MG1655 DUF1097 family inner membrane protein NP_415554.4 1100296 D 511145 CDS NP_415555.1 16129000 945619 complement(1100851..1101684) 1 NC_000913.3 curli production assembly/transport component, 2nd curli operon; curli production assembly/transport outer membrane lipoprotein 1101684 csgG 945619 csgG Escherichia coli str. K-12 substr. MG1655 curli production assembly/transport outer membrane lipoprotein NP_415555.1 1100851 R 511145 CDS NP_415556.1 16129001 945622 complement(1101711..1102127) 1 NC_000913.3 curli production assembly/transport component, 2nd curli operon; curli nucleation outer membrane protein 1102127 csgF 945622 csgF Escherichia coli str. K-12 substr. MG1655 curli nucleation outer membrane protein NP_415556.1 1101711 R 511145 CDS NP_415557.1 16129002 945711 complement(1102152..1102541) 1 NC_000913.3 curli production assembly/transport component, 2nd curli operon; curlin secretion specificity factor 1102541 csgE 945711 csgE Escherichia coli str. K-12 substr. MG1655 curlin secretion specificity factor NP_415557.1 1102152 R 511145 CDS NP_415558.1 16129003 949119 complement(1102546..1103196) 1 NC_000913.3 putative 2-component transcriptional regulator for 2nd curli operon; csgBAC operon transcriptional regulator 1103196 csgD 949119 csgD Escherichia coli str. K-12 substr. MG1655 csgBAC operon transcriptional regulator NP_415558.1 1102546 R 511145 CDS NP_415559.1 16129004 947391 1103951..1104406 1 NC_000913.3 minor curlin subunit precursor, similar ro CsgA; curlin nucleator protein, minor subunit in curli complex 1104406 csgB 947391 csgB Escherichia coli str. K-12 substr. MG1655 curlin nucleator protein, minor subunit in curli complex NP_415559.1 1103951 D 511145 CDS NP_415560.1 16129005 949055 1104447..1104902 1 NC_000913.3 curlin major subunit, coiled surface structures; cryptic; curlin subunit, amyloid curli fibers, cryptic 1104902 csgA 949055 csgA Escherichia coli str. K-12 substr. MG1655 curlin subunit, amyloid curli fibers, cryptic NP_415560.1 1104447 D 511145 CDS NP_415561.1 16129006 945623 1104961..1105293 1 NC_000913.3 putative curli production protein; curli assembly protein 1105293 csgC 945623 csgC Escherichia coli str. K-12 substr. MG1655 curli assembly protein NP_415561.1 1104961 D 511145 CDS NP_415562.1 16129007 949012 1105414..1105725 1 NC_000913.3 uncharacterized protein 1105725 ymdA 949012 ymdA Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_415562.1 1105414 D 511145 CDS NP_415563.1 16129008 946987 1105820..1106353 1 NC_000913.3 putative polyprotein; O-acetyl-ADP-ribose deacetylase; RNase III inhibitor during cold shock; putative cardiolipin synthase C regulatory subunit 1106353 ymdB 946987 ymdB Escherichia coli str. K-12 substr. MG1655 O-acetyl-ADP-ribose deacetylase; RNase III inhibitor during cold shock; putative cardiolipin synthase C regulatory subunit NP_415563.1 1105820 D 511145 CDS NP_415564.2 90111207 947321 1106355..1107776 1 NC_000913.3 putative synthase; stationary phase cardiolipin synthase 3 1107776 clsC 947321 clsC Escherichia coli str. K-12 substr. MG1655 stationary phase cardiolipin synthase 3 NP_415564.2 1106355 D 511145 CDS NP_415565.1 16129010 946944 complement(1107784..1108941) 1 NC_000913.3 osmoregulated periplasmic glucan succinylation membrane protein 1108941 opgC 946944 opgC Escherichia coli str. K-12 substr. MG1655 osmoregulated periplasmic glucan succinylation membrane protein NP_415565.1 1107784 R 511145 CDS NP_415566.1 16129011 945005 1109335..1110870 1 NC_000913.3 periplasmic glucans biosynthesis protein; osmoregulated periplasmic glucan (OPG) biosynthesis periplasmic protein 1110870 opgG 945005 opgG Escherichia coli str. K-12 substr. MG1655 osmoregulated periplasmic glucan (OPG) biosynthesis periplasmic protein NP_415566.1 1109335 D 511145 CDS NP_415567.1 16129012 945624 1110863..1113406 1 NC_000913.3 membrane glycosyltransferase; synthesis of membrane-derived oligosaccharide (MDO); membrane glycosyltransferase; nutrient-dependent cell size regulator, FtsZ assembly antagonist 1113406 opgH 945624 opgH Escherichia coli str. K-12 substr. MG1655 membrane glycosyltransferase; nutrient-dependent cell size regulator, FtsZ assembly antagonist NP_415567.1 1110863 D 511145 CDS NP_415568.1 16129013 945613 1113579..1113806 1 NC_000913.3 outer membrane integrity lipoprotein 1113806 yceK 945613 yceK Escherichia coli str. K-12 substr. MG1655 outer membrane integrity lipoprotein NP_415568.1 1113579 D 511145 CDS NP_415569.4 90111208 945612 complement(1113807..1114181) 1 NC_000913.3 acidic protein suppresses mutants lacking function of protein export; multicopy suppressor of secY and secA 1114181 msyB 945612 msyB Escherichia coli str. K-12 substr. MG1655 multicopy suppressor of secY and secA NP_415569.4 1113807 R 511145 CDS NP_415571.1 16129016 945627 complement(1114264..1115490) 1 NC_000913.3 putative transport protein; putative drug efflux system protein 1115490 mdtG 945627 mdtG Escherichia coli str. K-12 substr. MG1655 putative drug efflux system protein NP_415571.1 1114264 R 511145 CDS NP_415572.1 16129017 946216 complement(1115662..1116582) 1 NC_000913.3 heat shock protein; lauryl-acyl carrier protein (ACP)-dependent acyltransferase 1116582 lpxL 946216 lpxL Escherichia coli str. K-12 substr. MG1655 lauryl-acyl carrier protein (ACP)-dependent acyltransferase NP_415572.1 1115662 R 511145 CDS NP_415573.1 16129018 945601 1116807..1117859 1 NC_000913.3 putative rhodanese-related sulfurtransferase 1117859 yceA 945601 yceA Escherichia coli str. K-12 substr. MG1655 putative rhodanese-related sulfurtransferase NP_415573.1 1116807 D 511145 CDS NP_415574.1 16129019 946145 complement(1117901..1118476) 1 NC_000913.3 secreted protein 1118476 yceI 946145 yceI Escherichia coli str. K-12 substr. MG1655 secreted protein NP_415574.1 1117901 R 511145 CDS NP_415575.1 16129020 945628 complement(1118480..1119046) 1 NC_000913.3 putative cytochrome b561 1119046 yceJ 945628 yceJ Escherichia coli str. K-12 substr. MG1655 putative cytochrome b561 NP_415575.1 1118480 R 511145 CDS NP_415576.1 16129021 945629 complement(1119307..1119447) 1 NC_000913.3 uncharacterized protein 1119447 yceO 945629 yceO Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_415576.1 1119307 R 511145 CDS NP_415577.1 16129022 944983 complement(1119468..1120586) 1 NC_000913.3 sarcosine oxidase-like protein; N-methyltryptophan oxidase, FAD-binding 1120586 solA 944983 solA Escherichia coli str. K-12 substr. MG1655 N-methyltryptophan oxidase, FAD-binding NP_415577.1 1119468 R 511145 CDS NP_415578.3 49176074 946104 complement(1120701..1120955) 1 NC_000913.3 biofilm regulator 1120955 bssS 946104 bssS Escherichia coli str. K-12 substr. MG1655 biofilm regulator NP_415578.3 1120701 R 511145 CDS NP_415579.1 16129024 945022 complement(1121242..1121487) 1 NC_000913.3 damage-inducible protein I; DNA damage-inducible protein I 1121487 dinI 945022 dinI Escherichia coli str. K-12 substr. MG1655 DNA damage-inducible protein I NP_415579.1 1121242 R 511145 CDS NP_415580.1 16129025 945787 complement(1121561..1122607) 1 NC_000913.3 dihydro-orotase 1122607 pyrC 945787 pyrC Escherichia coli str. K-12 substr. MG1655 dihydro-orotase NP_415580.1 1121561 R 511145 CDS NP_415581.1 16129026 947377 complement(1122713..1123273) 1 NC_000913.3 lipoprotein, DUF1439 family 1123273 yceB 947377 yceB Escherichia coli str. K-12 substr. MG1655 lipoprotein, DUF1439 family NP_415581.1 1122713 R 511145 CDS NP_415582.1 16129027 946926 complement(1123407..1124054) 1 NC_000913.3 glutaredoxin 2; glutaredoxin 2 (Grx2) 1124054 grxB 946926 grxB Escherichia coli str. K-12 substr. MG1655 glutaredoxin 2 (Grx2) NP_415582.1 1123407 R 511145 CDS NP_415583.4 90111209 946920 complement(1124118..1125326) 1 NC_000913.3 multidrug resistance efflux transporter conferring overexpression resistance to norfloxacin and enoxacin 1125326 mdtH 946920 mdtH Escherichia coli str. K-12 substr. MG1655 multidrug resistance efflux transporter conferring overexpression resistance to norfloxacin and enoxacin NP_415583.4 1124118 R 511145 CDS NP_415584.1 16129029 946910 1125562..1126146 1 NC_000913.3 acetylation of N-terminal alanine of 30S ribosomal subunit protein S5; ribosomal-protein-S5-alanine N-acetyltransferase 1126146 rimJ 946910 rimJ Escherichia coli str. K-12 substr. MG1655 ribosomal-protein-S5-alanine N-acetyltransferase NP_415584.1 1125562 D 511145 CDS NP_415585.1 16129030 945633 1126157..1126804 1 NC_000913.3 UPF0502 family protein 1126804 yceH 945633 yceH Escherichia coli str. K-12 substr. MG1655 UPF0502 family protein NP_415585.1 1126157 D 511145 CDS NP_415586.1 16129031 945204 1126806..1127729 1 NC_000913.3 putative virulence factor; putative oxidoreductase 1127729 yceM 945204 yceM Escherichia coli str. K-12 substr. MG1655 putative oxidoreductase NP_415586.1 1126806 D 511145 CDS NP_415587.1 16129032 945487 1127839..1129374 1 NC_000913.3 putative virulence factor; putative peptidoglycan lipid II flippase 1129374 murJ 945487 murJ Escherichia coli str. K-12 substr. MG1655 putative peptidoglycan lipid II flippase NP_415587.1 1127839 D 511145 CDS NP_415588.1 16129033 945634 complement(1129414..1129830) 1 NC_000913.3 protein of flagellar biosynthesis; export chaperone for FlgK and FlgL 1129830 flgN 945634 flgN Escherichia coli str. K-12 substr. MG1655 export chaperone for FlgK and FlgL NP_415588.1 1129414 R 511145 CDS NP_415589.1 16129034 946684 complement(1129835..1130128) 1 NC_000913.3 anti-FliA (anti-sigma) factor; also known as RflB protein; anti-sigma factor for FliA (sigma 28) 1130128 flgM 946684 flgM Escherichia coli str. K-12 substr. MG1655 anti-sigma factor for FliA (sigma 28) NP_415589.1 1129835 R 511145 CDS NP_415590.1 16129035 946300 complement(1130204..1130863) 1 NC_000913.3 flagellar biosynthesis; assembly of basal-body periplasmic P ring; assembly protein for flagellar basal-body periplasmic P ring 1130863 flgA 946300 flgA Escherichia coli str. K-12 substr. MG1655 assembly protein for flagellar basal-body periplasmic P ring NP_415590.1 1130204 R 511145 CDS NP_415591.1 16129036 945678 1131018..1131434 1 NC_000913.3 flagellar biosynthesis, cell-proximal portion of basal-body rod; flagellar component of cell-proximal portion of basal-body rod 1131434 flgB 945678 flgB Escherichia coli str. K-12 substr. MG1655 flagellar component of cell-proximal portion of basal-body rod NP_415591.1 1131018 D 511145 CDS NP_415592.1 16129037 946687 1131438..1131842 1 NC_000913.3 flagellar biosynthesis, cell-proximal portion of basal-body rod; flagellar component of cell-proximal portion of basal-body rod 1131842 flgC 946687 flgC Escherichia coli str. K-12 substr. MG1655 flagellar component of cell-proximal portion of basal-body rod NP_415592.1 1131438 D 511145 CDS NP_415593.1 16129038 945813 1131854..1132549 1 NC_000913.3 flagellar biosynthesis, initiation of hook assembly; flagellar hook assembly protein 1132549 flgD 945813 flgD Escherichia coli str. K-12 substr. MG1655 flagellar hook assembly protein NP_415593.1 1131854 D 511145 CDS NP_415594.1 16129039 945636 1132574..1133782 1 NC_000913.3 flagellar biosynthesis, hook protein; flagellar hook protein 1133782 flgE 945636 flgE Escherichia coli str. K-12 substr. MG1655 flagellar hook protein NP_415594.1 1132574 D 511145 CDS NP_415595.1 16129040 945639 1133802..1134557 1 NC_000913.3 flagellar biosynthesis, cell-proximal portion of basal-body rod; flagellar component of cell-proximal portion of basal-body rod 1134557 flgF 945639 flgF Escherichia coli str. K-12 substr. MG1655 flagellar component of cell-proximal portion of basal-body rod NP_415595.1 1133802 D 511145 CDS NP_415596.1 16129041 945647 1134729..1135511 1 NC_000913.3 flagellar biosynthesis, cell-distal portion of basal-body rod; flagellar component of cell-distal portion of basal-body rod 1135511 flgG 945647 flgG Escherichia coli str. K-12 substr. MG1655 flagellar component of cell-distal portion of basal-body rod NP_415596.1 1134729 D 511145 CDS NP_415597.1 16129042 946996 1135564..1136262 1 NC_000913.3 flagellar biosynthesis, basal-body outer-membrane L (lipopolysaccharide layer) ring protein; flagellar protein of basal-body outer-membrane L ring 1136262 flgH 946996 flgH Escherichia coli str. K-12 substr. MG1655 flagellar protein of basal-body outer-membrane L ring NP_415597.1 1135564 D 511145 CDS NP_415598.3 49176076 947534 1136274..1137371 1 NC_000913.3 homolog of Salmonella P-ring of flagella basal body; putative flagellar basal body protein 1137371 flgI 947534 flgI Escherichia coli str. K-12 substr. MG1655 putative flagellar basal body protein NP_415598.3 1136274 D 511145 CDS NP_415599.1 16129044 947456 1137371..1138312 1 NC_000913.3 flagellar biosynthesis; flagellar rod assembly protein and murein hydrolase; flagellum-specific muramidase 1138312 flgJ 947456 flgJ Escherichia coli str. K-12 substr. MG1655 flagellar rod assembly protein and murein hydrolase; flagellum-specific muramidase NP_415599.1 1137371 D 511145 CDS NP_415600.1 16129045 945648 1138378..1140021 1 NC_000913.3 flagellar biosynthesis, hook-filament junction protein 1; flagellar hook-filament junction protein 1 1140021 flgK 945648 flgK Escherichia coli str. K-12 substr. MG1655 flagellar hook-filament junction protein 1 NP_415600.1 1138378 D 511145 CDS NP_415601.1 16129046 945646 1140033..1140986 1 NC_000913.3 flagellar biosynthesis; hook-filament junction protein; flagellar hook-filament junction protein 1140986 flgL 945646 flgL Escherichia coli str. K-12 substr. MG1655 flagellar hook-filament junction protein NP_415601.1 1140033 D 511145 CDS NP_415602.1 16129047 945641 complement(1141182..1144367) 1 NC_000913.3 RNase E, membrane attachment, mRNA turnover, maturation 5S RNA; fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein 1144367 rne 945641 rne Escherichia coli str. K-12 substr. MG1655 fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein NP_415602.1 1141182 R 511145 CDS NP_415603.2 90111210 945640 1144502..1144822 1 NC_000913.3 uncharacterized protein 1144822 yceQ 945640 yceQ Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_415603.2 1144502 D 511145 CDS NP_415604.1 16129049 945637 1144940..1145899 1 NC_000913.3 23S rRNA pseudouridine(955,2504,2580) synthase 1145899 rluC 945637 rluC Escherichia coli str. K-12 substr. MG1655 23S rRNA pseudouridine(955,2504,2580) synthase NP_415604.1 1144940 D 511145 CDS NP_415605.2 90111211 945631 complement(1146011..1146595) 1 NC_000913.3 Maf-like protein 1146595 yceF 945631 yceF Escherichia coli str. K-12 substr. MG1655 Maf-like protein NP_415605.2 1146011 R 511145 CDS NP_415606.1 16129051 945650 1146794..1147315 1 NC_000913.3 DUF177 family protein 1147315 yceD 945650 yceD Escherichia coli str. K-12 substr. MG1655 DUF177 family protein NP_415606.1 1146794 D 511145 CDS NP_415607.1 16129052 945657 1147367..1147540 1 NC_000913.3 50S ribosomal subunit protein L32 1147540 rpmF 945657 rpmF Escherichia coli str. K-12 substr. MG1655 50S ribosomal subunit protein L32 NP_415607.1 1147367 D 511145 CDS NP_415608.2 90111212 946165 1147621..1148691 1 NC_000913.3 glycerolphosphate auxotrophy in plsB background; putative phosphate acyltransferase 1148691 plsX 946165 plsX Escherichia coli str. K-12 substr. MG1655 putative phosphate acyltransferase NP_415608.2 1147621 D 511145 CDS NP_415609.1 16129054 946003 1148759..1149712 1 NC_000913.3 3-oxoacyl-[acyl-carrier-protein] synthase III; acetylCoA ACP transacylase; 3-oxoacyl-[acyl-carrier-protein] synthase III 1149712 fabH 946003 fabH Escherichia coli str. K-12 substr. MG1655 3-oxoacyl-[acyl-carrier-protein] synthase III NP_415609.1 1148759 D 511145 CDS NP_415610.1 16129055 945766 1149728..1150657 1 NC_000913.3 malonyl-CoA-[acyl-carrier-protein] transacylase 1150657 fabD 945766 fabD Escherichia coli str. K-12 substr. MG1655 malonyl-CoA-[acyl-carrier-protein] transacylase NP_415610.1 1149728 D 511145 CDS NP_415611.1 16129056 945645 1150670..1151404 1 NC_000913.3 3-oxoacyl-[acyl-carrier-protein] reductase 1151404 fabG 945645 fabG Escherichia coli str. K-12 substr. MG1655 3-oxoacyl-[acyl-carrier-protein] reductase NP_415611.1 1150670 D 511145 CDS NP_415612.1 16129057 944805 1151615..1151851 1 NC_000913.3 acyl carrier protein; acyl carrier protein (ACP) 1151851 acpP 944805 acpP Escherichia coli str. K-12 substr. MG1655 acyl carrier protein (ACP) NP_415612.1 1151615 D 511145 CDS NP_415613.1 16129058 946665 1151939..1153180 1 NC_000913.3 3-oxoacyl-[acyl-carrier-protein] synthase II 1153180 fabF 946665 fabF Escherichia coli str. K-12 substr. MG1655 3-oxoacyl-[acyl-carrier-protein] synthase II NP_415613.1 1151939 D 511145 CDS NP_415614.1 16129059 946647 1153300..1154109 1 NC_000913.3 4-amino-4-deoxychorismate lyase; 4-amino-4-deoxychorismate lyase component of para-aminobenzoate synthase multienzyme complex 1154109 pabC 946647 pabC Escherichia coli str. K-12 substr. MG1655 4-amino-4-deoxychorismate lyase component of para-aminobenzoate synthase multienzyme complex NP_415614.1 1153300 D 511145 CDS NP_415615.1 16129060 945660 1154112..1155134 1 NC_000913.3 putative thymidylate kinase; septation protein, ampicillin sensitivity 1155134 yceG 945660 yceG Escherichia coli str. K-12 substr. MG1655 septation protein, ampicillin sensitivity NP_415615.1 1154112 D 511145 CDS NP_415616.1 16129061 945663 1155124..1155765 1 NC_000913.3 thymidylate kinase 1155765 tmk 945663 tmk Escherichia coli str. K-12 substr. MG1655 thymidylate kinase NP_415616.1 1155124 D 511145 CDS NP_415617.1 16129062 945661 1155762..1156766 1 NC_000913.3 DNA polymerase III, delta prime subunit 1156766 holB 945661 holB Escherichia coli str. K-12 substr. MG1655 DNA polymerase III, delta prime subunit NP_415617.1 1155762 D 511145 CDS NP_415618.1 16129063 945656 1156777..1157574 1 NC_000913.3 putative DNase 1157574 ycfH 945656 ycfH Escherichia coli str. K-12 substr. MG1655 putative DNase NP_415618.1 1156777 D 511145 CDS NP_415619.1 16129064 945651 1157869..1159302 1 NC_000913.3 PTS system, glucose-specific IIBC component; fused glucose-specific PTS enzymes: IIB component/IIC component 1159302 ptsG 945651 ptsG Escherichia coli str. K-12 substr. MG1655 fused glucose-specific PTS enzymes: IIB component/IIC component NP_415619.1 1157869 D 511145 CDS NP_415620.1 16129065 945649 complement(1159362..1161551) 1 NC_000913.3 outer membrane receptor for ferric iron uptake; ferric-rhodotorulic acid outer membrane transporter 1161551 fhuE 945649 fhuE Escherichia coli str. K-12 substr. MG1655 ferric-rhodotorulic acid outer membrane transporter NP_415620.1 1159362 R 511145 CDS NP_415621.3 49176077 948549 1161885..1162244 1 NC_000913.3 purine nucleoside phosphoramidase, dadA activator protein 1162244 hinT 948549 hinT Escherichia coli str. K-12 substr. MG1655 purine nucleoside phosphoramidase, dadA activator protein NP_415621.3 1161885 D 511145 CDS NP_415622.1 16129067 948539 1162247..1162624 1 NC_000913.3 uncharacterized protein 1162624 ycfL 948539 ycfL Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_415622.1 1162247 D 511145 CDS NP_415623.1 16129068 948536 1162638..1163279 1 NC_000913.3 OM lipoprotein stimulator of MrcB transpeptidase 1163279 lpoB 948536 lpoB Escherichia coli str. K-12 substr. MG1655 OM lipoprotein stimulator of MrcB transpeptidase NP_415623.1 1162638 D 511145 CDS NP_415624.1 16129069 948525 1163260..1164084 1 NC_000913.3 putative beta-glucosidase; thiamine kinase 1164084 thiK 948525 thiK Escherichia coli str. K-12 substr. MG1655 thiamine kinase NP_415624.1 1163260 D 511145 CDS NP_415625.1 16129070 945671 1164095..1165120 1 NC_000913.3 beta N-acetyl-glucosaminidase 1165120 nagZ 945671 nagZ Escherichia coli str. K-12 substr. MG1655 beta N-acetyl-glucosaminidase NP_415625.1 1164095 D 511145 CDS NP_415626.4 90111213 945676 1165143..1165685 1 NC_000913.3 putative UPF0227 family esterase 1165685 ycfP 945676 ycfP Escherichia coli str. K-12 substr. MG1655 putative UPF0227 family esterase NP_415626.4 1165143 D 511145 CDS NP_415627.1 16129072 946792 1166085..1167389 1 NC_000913.3 respiratory NADH dehydrogenase; respiratory NADH dehydrogenase 2/cupric reductase 1167389 ndh 946792 ndh Escherichia coli str. K-12 substr. MG1655 respiratory NADH dehydrogenase 2/cupric reductase NP_415627.1 1166085 D 511145 CDS NP_415628.1 16129073 945977 1167599..1168138 1 NC_000913.3 uncharacterized protein 1168138 ycfJ 945977 ycfJ Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_415628.1 1167599 D 511145 CDS NP_415629.4 90111214 947425 complement(1168200..1168832) 1 NC_000913.3 repressor for bhsA(ycfR) 1168832 ycfQ 947425 ycfQ Escherichia coli str. K-12 substr. MG1655 repressor for bhsA(ycfR) NP_415629.4 1168200 R 511145 CDS NP_415630.1 16129075 945492 1169073..1169330 1 NC_000913.3 biofilm, cell surface and signaling protein 1169330 bhsA 945492 bhsA Escherichia coli str. K-12 substr. MG1655 biofilm, cell surface and signaling protein NP_415630.1 1169073 D 511145 CDS NP_415631.1 16129076 945666 complement(1169412..1170374) 1 NC_000913.3 L,D-transpeptidase linking Lpp to murein 1170374 ldtC 945666 ldtC Escherichia coli str. K-12 substr. MG1655 L,D-transpeptidase linking Lpp to murein NP_415631.1 1169412 R 511145 CDS NP_415632.1 16129077 945681 complement(1170518..1173964) 1 NC_000913.3 transcription-repair coupling factor; mutation frequency decline; transcription-repair coupling factor 1173964 mfd 945681 mfd Escherichia coli str. K-12 substr. MG1655 transcription-repair coupling factor NP_415632.1 1170518 R 511145 CDS NP_415633.1 16129078 945679 complement(1174092..1175165) 1 NC_000913.3 inner membrane protein 1175165 ycfT 945679 ycfT Escherichia coli str. K-12 substr. MG1655 inner membrane protein NP_415633.1 1174092 R 511145 CDS NP_415634.1 16129079 945673 1175427..1176626 1 NC_000913.3 membrane component of ABC superfamily; lipoprotein-releasing system transmembrane protein 1176626 lolC 945673 lolC Escherichia coli str. K-12 substr. MG1655 lipoprotein-releasing system transmembrane protein NP_415634.1 1175427 D 511145 CDS NP_415635.4 90111215 945670 1176619..1177320 1 NC_000913.3 putative ATP-binding component of a transport system; outer membrane-specific lipoprotein transporter subunit 1177320 lolD 945670 lolD Escherichia coli str. K-12 substr. MG1655 outer membrane-specific lipoprotein transporter subunit NP_415635.4 1176619 D 511145 CDS NP_415636.1 16129081 945665 1177320..1178564 1 NC_000913.3 putative kinase; membrane component of ABC superfamily; lipoprotein-releasing system transmembrane protein 1178564 lolE 945665 lolE Escherichia coli str. K-12 substr. MG1655 lipoprotein-releasing system transmembrane protein NP_415636.1 1177320 D 511145 CDS NP_415637.1 16129082 945664 1178593..1179504 1 NC_000913.3 N-acetyl-D-glucosamine kinase 1179504 nagK 945664 nagK Escherichia coli str. K-12 substr. MG1655 N-acetyl-D-glucosamine kinase NP_415637.1 1178593 D 511145 CDS NP_415638.2 308209619 945687 1179631..1180359 1 NC_000913.3 putative nicotinic acid mononucleotide:5,6-dimethylbenzimidazole (DMB) phosphoribosyltransferase; deacetylase of acs and cheY, chemotaxis regulator 1180359 cobB 945687 cobB Escherichia coli str. K-12 substr. MG1655 deacetylase of acs and cheY, chemotaxis regulator NP_415638.2 1179631 D 511145 CDS NP_415639.1 16129084 945685 complement(1180479..1181267) 1 NC_000913.3 inner membrane protein 1181267 ycfZ 945685 ycfZ Escherichia coli str. K-12 substr. MG1655 inner membrane protein NP_415639.1 1180479 R 511145 CDS NP_415640.2 90111216 945684 complement(1181264..1181725) 1 NC_000913.3 DUF3592 family inner membrane protein 1181725 ymfA 945684 ymfA Escherichia coli str. K-12 substr. MG1655 DUF3592 family inner membrane protein NP_415640.2 1181264 R 511145 CDS NP_415641.1 16129086 945682 complement(1181783..1182829) 1 NC_000913.3 spermidine/putrescine periplasmic transport protein; periplasmic-binding component of ABC superfamily; polyamine transporter subunit 1182829 potD 945682 potD Escherichia coli str. K-12 substr. MG1655 polyamine transporter subunit NP_415641.1 1181783 R 511145 CDS NP_415642.1 16129087 945691 complement(1182826..1183620) 1 NC_000913.3 spermidine/putrescine transport system permease; membrane component of ABC superfamily; polyamine transporter subunit 1183620 potC 945691 potC Escherichia coli str. K-12 substr. MG1655 polyamine transporter subunit NP_415642.1 1182826 R 511145 CDS NP_415643.3 162135921 945692 complement(1183617..1184444) 1 NC_000913.3 spermidine/putrescine transport system permease; membrane component of ABC superfamily; polyamine transporter subunit 1184444 potB 945692 potB Escherichia coli str. K-12 substr. MG1655 polyamine transporter subunit NP_415643.3 1183617 R 511145 CDS NP_415644.1 16129089 946323 complement(1184458..1185594) 1 NC_000913.3 ATP-binding component of spermidine/putrescine transport; polyamine transporter subunit 1185594 potA 946323 potA Escherichia coli str. K-12 substr. MG1655 polyamine transporter subunit NP_415644.1 1184458 R 511145 CDS NP_415645.1 16129090 946333 1185844..1187070 1 NC_000913.3 putative peptidase T; peptidase T 1187070 pepT 946333 pepT Escherichia coli str. K-12 substr. MG1655 peptidase T NP_415645.1 1185844 D 511145 CDS NP_415646.4 90111217 945391 complement(1187119..1188240) 1 NC_000913.3 50S ribosomal protein L16 arginine hydroxylase; 2-oxoglutarate oxygenase 1188240 roxA 945391 roxA Escherichia coli str. K-12 substr. MG1655 50S ribosomal protein L16 arginine hydroxylase; 2-oxoglutarate oxygenase NP_415646.4 1187119 R 511145 CDS NP_415647.1 16129092 946326 complement(1188316..1189776) 1 NC_000913.3 sensor protein PhoQ; sensory histidine kinase in two-component regulatory system with PhoP 1189776 phoQ 946326 phoQ Escherichia coli str. K-12 substr. MG1655 sensory histidine kinase in two-component regulatory system with PhoP NP_415647.1 1188316 R 511145 CDS NP_415648.1 16129093 945697 complement(1189776..1190447) 1 NC_000913.3 transcriptional regulatory protein; response regulator in two-component regulatory system with PhoQ 1190447 phoP 945697 phoP Escherichia coli str. K-12 substr. MG1655 response regulator in two-component regulatory system with PhoQ NP_415648.1 1189776 R 511145 CDS NP_415649.1 16129094 945695 complement(1190616..1191986) 1 NC_000913.3 adenylosuccinate lyase 1191986 purB 945695 purB Escherichia coli str. K-12 substr. MG1655 adenylosuccinate lyase NP_415649.1 1190616 R 511145 CDS NP_415650.1 16129095 945693 complement(1191990..1192631) 1 NC_000913.3 putative lysogenization regulator 1192631 hflD 945693 hflD Escherichia coli str. K-12 substr. MG1655 putative lysogenization regulator NP_415650.1 1191990 R 511145 CDS NP_415651.4 90111218 945690 complement(1192667..1193773) 1 NC_000913.3 tRNA(Gln,Lys,Glu) U34 2-thiouridylase, first step in mnm(5)-s(2)U34-tRNA synthesis 1193773 mnmA 945690 mnmA Escherichia coli str. K-12 substr. MG1655 tRNA(Gln,Lys,Glu) U34 2-thiouridylase, first step in mnm(5)-s(2)U34-tRNA synthesis NP_415651.4 1192667 R 511145 CDS NP_415652.1 16129097 945689 complement(1193827..1194288) 1 NC_000913.3 bifunctional thiamine pyrimidine pyrophosphate hydrolase/ thiamine pyrophosphate hydrolase 1194288 nudJ 945689 nudJ Escherichia coli str. K-12 substr. MG1655 bifunctional thiamine pyrimidine pyrophosphate hydrolase/ thiamine pyrophosphate hydrolase NP_415652.1 1193827 R 511145 CDS NP_415653.4 162135898 945701 complement(1194298..1194951) 1 NC_000913.3 23S rRNA pseudouridine(2457) synthase 1194951 rluE 945701 rluE Escherichia coli str. K-12 substr. MG1655 23S rRNA pseudouridine(2457) synthase NP_415653.4 1194298 R 511145 CDS NP_415654.1 16129099 945702 1195123..1196373 1 NC_000913.3 isocitrate dehydrogenase, specific for NADP+; e14 prophage; isocitrate dehydrogenase, specific for NADP+ 1196373 icd 945702 icd Escherichia coli str. K-12 substr. MG1655 e14 prophage; isocitrate dehydrogenase, specific for NADP+ NP_415654.1 1195123 D 511145 CDS NP_415655.1 16129100 945329 complement(1196867..1197532) 1 NC_000913.3 e14 prophage; putative SAM-dependent methyltransferase 1197532 ymfD 945329 ymfD Escherichia coli str. K-12 substr. MG1655 e14 prophage; putative SAM-dependent methyltransferase NP_415655.1 1196867 R 511145 CDS NP_415656.1 16129101 946722 complement(1197533..1198237) 1 NC_000913.3 e14 prophage; putative inner membrane protein 1198237 ymfE 946722 ymfE Escherichia coli str. K-12 substr. MG1655 e14 prophage; putative inner membrane protein NP_415656.1 1197533 R 511145 CDS NP_415657.1 16129102 948421 1198695..1199588 1 NC_000913.3 phage T4 late gene expression; at locus of e14 element; e14 prophage; cell death peptidase, inhibitor of T4 late gene expression 1199588 lit 948421 lit Escherichia coli str. K-12 substr. MG1655 e14 prophage; cell death peptidase, inhibitor of T4 late gene expression NP_415657.1 1198695 D 511145 CDS NP_415658.1 16129103 948034 complement(1199679..1200806) 1 NC_000913.3 prophage e14 integrase; e14 prophage; putative integrase 1200806 intE 948034 intE Escherichia coli str. K-12 substr. MG1655 e14 prophage; putative integrase NP_415658.1 1199679 R 511145 CDS NP_415659.1 16129104 945705 complement(1200787..1201032) 1 NC_000913.3 e14 prophage; putative excisionase 1201032 xisE 945705 xisE Escherichia coli str. K-12 substr. MG1655 e14 prophage; putative excisionase NP_415659.1 1200787 R 511145 CDS NP_415661.2 90111220 945712 1201497..1201838 1 NC_000913.3 e14 prophage; uncharacterized protein 1201838 ymfI 945712 ymfI Escherichia coli str. K-12 substr. MG1655 e14 prophage; uncharacterized protein NP_415661.2 1201497 D 511145 CDS NP_415662.2 90111221 945718 complement(1201776..1202084) 1 NC_000913.3 e14 prophage; uncharacterized protein 1202084 ymfJ 945718 ymfJ Escherichia coli str. K-12 substr. MG1655 e14 prophage; uncharacterized protein NP_415662.2 1201776 R 511145 CDS NP_415663.1 16129108 945719 complement(1202259..1202933) 1 NC_000913.3 e14 prophage; repressor protein phage e14 1202933 cohE 945719 cohE Escherichia coli str. K-12 substr. MG1655 e14 prophage; repressor protein phage e14 NP_415663.1 1202259 R 511145 CDS NP_415664.2 90111222 945720 1203024..1203224 1 NC_000913.3 e14 prophage; putative DNA-binding transcriptional regulator 1203224 croE 945720 croE Escherichia coli str. K-12 substr. MG1655 e14 prophage; putative DNA-binding transcriptional regulator NP_415664.2 1203024 D 511145 CDS NP_415665.2 145698241 945717 1203268..1203825 1 NC_000913.3 e14 prophage; putative DNA-binding transcriptional regulator 1203825 ymfL 945717 ymfL Escherichia coli str. K-12 substr. MG1655 e14 prophage; putative DNA-binding transcriptional regulator NP_415665.2 1203268 D 511145 CDS NP_415666.1 16129111 945715 1203822..1204160 1 NC_000913.3 e14 prophage; uncharacterized protein 1204160 ymfM 945715 ymfM Escherichia coli str. K-12 substr. MG1655 e14 prophage; uncharacterized protein NP_415666.1 1203822 D 511145 CDS b4692 7751644 1204170..1204403 1 NC_000913.3 pseudogene, lambda replication protein O homolog; CPS-53/KpLE1 prophage;Phage or Prophage Related; <NULL_VALUE> 1204403 oweE 7751644 oweE Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 1204170 D 511145 CDS b4693 7751645 1204404..1205537 1 NC_000913.3 pseudogene, phage terminase protein A family, e14 prophage;Phage or Prophage Related; <NULL_VALUE> 1205537 aaaE 7751645 aaaE Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 1204404 D 511145 CDS NP_415668.1 16129113 945700 1205549..1205731 1 NC_000913.3 e14 prophage; uncharacterized protein 1205731 ymfR 945700 ymfR Escherichia coli str. K-12 substr. MG1655 e14 prophage; uncharacterized protein NP_415668.1 1205549 D 511145 CDS b1151 945698 1205731..1206142 1 NC_000913.3 pseudogene, portal protein family, e14 prophage;Phage or Prophage Related; <NULL_VALUE> 1206142 beeE 945698 beeE Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 1205731 D 511145 CDS b1152 945703 1206143..1206922 1 NC_000913.3 pseudogene, e14 prophage;Phage or Prophage Related; <NULL_VALUE> 1206922 jayE 945703 jayE Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 1206143 D 511145 CDS NP_415671.1 16129116 945707 1206913..1207497 1 NC_000913.3 prohage e14 tail protein homolog 1207497 ymfQ 945707 ymfQ Escherichia coli str. K-12 substr. MG1655 prohage e14 tail protein homolog NP_415671.1 1206913 D 511145 CDS NP_415672.1 16129117 945726 1207501..1208130 1 NC_000913.3 e14 prophage; uncharacterized protein 1208130 stfP 945726 stfP Escherichia coli str. K-12 substr. MG1655 e14 prophage; uncharacterized protein NP_415672.1 1207501 D 511145 CDS NP_415673.1 16129118 945724 1208132..1208545 1 NC_000913.3 e14 prophage; uncharacterized protein 1208545 tfaP 945724 tfaP Escherichia coli str. K-12 substr. MG1655 e14 prophage; uncharacterized protein NP_415673.1 1208132 D 511145 CDS NP_415674.1 16129119 945723 complement(1208517..1209119) 1 NC_000913.3 e14 prophage; putative tail fiber assembly protein 1209119 tfaE 945723 tfaE Escherichia coli str. K-12 substr. MG1655 e14 prophage; putative tail fiber assembly protein NP_415674.1 1208517 R 511145 CDS b1157 945722 complement(1209119..1209619) 1 NC_000913.3 pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related; <NULL_VALUE> 1209619 stfE 945722 stfE Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 1209119 R 511145 CDS NP_415676.1 16129121 945721 1209685..1210239 1 NC_000913.3 inversion of adjacent DNA; at locus of e14 element; e14 prophage; site-specific DNA recombinase 1210239 pinE 945721 pinE Escherichia coli str. K-12 substr. MG1655 e14 prophage; site-specific DNA recombinase NP_415676.1 1209685 D 511145 CDS NP_415677.1 16129122 945727 1210346..1211179 1 NC_000913.3 restriction of DNA at 5-methylcytosine residues; at locus of e14 element; putative 5-methylcytosine/5-hydroxymethylcytosine-specific restriction nuclease; 5-methylcytosine DNA binding protein; e14 prophage gene 1211179 mcrA 945727 mcrA Escherichia coli str. K-12 substr. MG1655 putative 5-methylcytosine/5-hydroxymethylcytosine-specific restriction nuclease; 5-methylcytosine DNA binding protein; e14 prophage gene NP_415677.1 1210346 D 511145 CDS b4519 4056026 1211413..1211577 1 NC_000913.3 pseudogene, isocitrate dehydrogenase C-terminal gene fragment; idcC' is a 54 codon 3' gene fragment created during e14 prophage insertion; <NULL_VALUE> 1211577 icdC 4056026 icdC Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 1211413 D 511145 CDS NP_415678.1 16129123 945729 complement(1211680..1212003) 1 NC_000913.3 RpoS stabilzer during Mg starvation, anti-RssB factor 1212003 iraM 945729 iraM Escherichia coli str. K-12 substr. MG1655 RpoS stabilzer during Mg starvation, anti-RssB factor NP_415678.1 1211680 R 511145 CDS NP_415679.1 16129124 945733 complement(1212703..1213107) 1 NC_000913.3 DUF1398 family protein 1213107 ycgX 945733 ycgX Escherichia coli str. K-12 substr. MG1655 DUF1398 family protein NP_415679.1 1212703 R 511145 CDS NP_415680.1 16129125 945735 complement(1213328..1214059) 1 NC_000913.3 putative transcriptional regulator; repressor of blue light-responsive genes 1214059 bluR 945735 bluR Escherichia coli str. K-12 substr. MG1655 repressor of blue light-responsive genes NP_415680.1 1213328 R 511145 CDS NP_415681.1 16129126 947592 complement(1214264..1215475) 1 NC_000913.3 anti-repressor for YcgE, blue light-responsive; FAD-binding; has c-di-GMP phosphodiesterase-like EAL domain, but does not degrade c-di-GMP 1215475 bluF 947592 bluF Escherichia coli str. K-12 substr. MG1655 anti-repressor for YcgE, blue light-responsive; FAD-binding; has c-di-GMP phosphodiesterase-like EAL domain, but does not degrade c-di-GMP NP_415681.1 1214264 R 511145 CDS NP_415682.1 16129127 945885 1215789..1216025 1 NC_000913.3 RcsB connector protein for regulation of biofilm and acid-resistance 1216025 ycgZ 945885 ycgZ Escherichia coli str. K-12 substr. MG1655 RcsB connector protein for regulation of biofilm and acid-resistance NP_415682.1 1215789 D 511145 CDS NP_415683.1 16129128 948991 1216068..1216340 1 NC_000913.3 RcsB connector protein for regulation of biofilm 1216340 ymgA 948991 ymgA Escherichia coli str. K-12 substr. MG1655 RcsB connector protein for regulation of biofilm NP_415683.1 1216068 D 511145 CDS NP_415684.1 16129129 945340 1216369..1216635 1 NC_000913.3 RcsB connector protein for regulation of biofilm and acid-resistance 1216635 ariR 945340 ariR Escherichia coli str. K-12 substr. MG1655 RcsB connector protein for regulation of biofilm and acid-resistance NP_415684.1 1216369 D 511145 CDS NP_415685.1 16129130 945090 1216748..1216996 1 NC_000913.3 Blue light, low temperature and stress induced protein 1216996 ymgC 945090 ymgC Escherichia coli str. K-12 substr. MG1655 Blue light, low temperature and stress induced protein NP_415685.1 1216748 D 511145 CDS NP_415686.2 90111225 945738 1217328..1218851 1 NC_000913.3 putative proteases; putative membrane-anchored cyclic-di-GMP phosphodiesterase 1218851 ycgG 945738 ycgG Escherichia coli str. K-12 substr. MG1655 putative membrane-anchored cyclic-di-GMP phosphodiesterase NP_415686.2 1217328 D 511145 CDS YP_588447.1 94541105 1450253 1218983..1219201 1 NC_000913.3 inner membrane division septum protein 1219201 ymgF 1450253 ymgF Escherichia coli str. K-12 substr. MG1655 inner membrane division septum protein YP_588447.1 1218983 D 511145 CDS b4491 2847703 1219601..1222248 1 NC_000913.3 pseudogene; putative ATP-binding component of a transport system; <NULL_VALUE> 1222248 ycgH 2847703 ycgH Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 1219601 D 511145 CDS NP_415689.2 90111226 945732 complement(1222305..1222634) 1 NC_000913.3 uncharacterized protein 1222634 ymgD 945732 ymgD Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_415689.2 1222305 R 511145 CDS NP_415690.5 288551664 945728 complement(1222644..1222988) 1 NC_000913.3 UPF0757 family protein 1222988 ymgG 945728 ymgG Escherichia coli str. K-12 substr. MG1655 UPF0757 family protein NP_415690.5 1222644 R 511145 CDS YP_001165314.1 145698243 5061515 complement(1222990..1223163) 1 NC_000913.3 uncharacterized protein 1223163 ymgI 5061515 ymgI Escherichia coli str. K-12 substr. MG1655 uncharacterized protein YP_001165314.1 1222990 R 511145 CDS YP_001165315.1 145698244 5061516 1223264..1223449 1 NC_000913.3 uncharacterized protein 1223449 ymgJ 5061516 ymgJ Escherichia coli str. K-12 substr. MG1655 uncharacterized protein YP_001165315.1 1223264 D 511145 CDS b4521 1450255 join(1223564..1223671,1223671..1223907) 1 NC_000913.3 pseudogene; <NULL_VALUE> 1223907 ycgI 1450255 ycgI Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 1223564 D 511145 CDS NP_415692.1 16129137 945740 complement(1224279..1224545) 1 NC_000913.3 cell division topological specificity factor, reverses MinC inhibition of ftsZ ring formation; cell division topological specificity factor 1224545 minE 945740 minE Escherichia coli str. K-12 substr. MG1655 cell division topological specificity factor NP_415692.1 1224279 R 511145 CDS NP_415693.1 16129138 945741 complement(1224549..1225361) 1 NC_000913.3 cell division inhibitor, a membrane ATPase, activates minC; membrane ATPase of the MinC-MinD-MinE system 1225361 minD 945741 minD Escherichia coli str. K-12 substr. MG1655 membrane ATPase of the MinC-MinD-MinE system NP_415693.1 1224549 R 511145 CDS NP_415694.1 16129139 945744 complement(1225385..1226080) 1 NC_000913.3 cell division inhibitor, inhibits ftsZ ring formation; cell division inhibitor 1226080 minC 945744 minC Escherichia coli str. K-12 substr. MG1655 cell division inhibitor NP_415694.1 1225385 R 511145 CDS NP_415695.1 16129140 946155 1226600..1226968 1 NC_000913.3 uncharacterized protein 1226968 ycgJ 946155 ycgJ Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_415695.1 1226600 D 511145 CDS NP_415696.1 16129141 946963 complement(1227071..1227472) 1 NC_000913.3 periplasmic inhibitor of g-type lysozyme 1227472 pliG 946963 pliG Escherichia coli str. K-12 substr. MG1655 periplasmic inhibitor of g-type lysozyme NP_415696.1 1227071 R 511145 CDS NP_415697.4 308209620 946226 1227714..1228007 1 NC_000913.3 UPF0745 family protein 1228007 ycgL 946226 ycgL Escherichia coli str. K-12 substr. MG1655 UPF0745 family protein NP_415697.4 1227714 D 511145 CDS NP_415698.1 16129143 946115 1228079..1228738 1 NC_000913.3 putative isomerase; putative isomerase/hydrolase 1228738 ycgM 946115 ycgM Escherichia coli str. K-12 substr. MG1655 putative isomerase/hydrolase NP_415698.1 1228079 D 511145 CDS NP_415699.5 145698245 945804 1228815..1229276 1 NC_000913.3 UPF0153 family cysteine cluster protein 1229276 ycgN 945804 ycgN Escherichia coli str. K-12 substr. MG1655 UPF0153 family cysteine cluster protein NP_415699.5 1228815 D 511145 CDS NP_415700.4 162135899 945745 complement(1229483..1230394) 1 NC_000913.3 hemolysin E 1230394 hlyE 945745 hlyE Escherichia coli str. K-12 substr. MG1655 hemolysin E NP_415700.4 1229483 R 511145 CDS NP_415701.1 16129146 945746 1230767..1231186 1 NC_000913.3 SOS mutagenesis; error-prone repair; processed to UmuD'; forms complex with UmuC; DNA polymerase V, subunit D 1231186 umuD 945746 umuD Escherichia coli str. K-12 substr. MG1655 DNA polymerase V, subunit D NP_415701.1 1230767 D 511145 CDS NP_415702.1 16129147 946359 1231186..1232454 1 NC_000913.3 SOS mutagenesis and repair; DNA polymerase V, subunit C 1232454 umuC 946359 umuC Escherichia coli str. K-12 substr. MG1655 DNA polymerase V, subunit C NP_415702.1 1231186 D 511145 CDS NP_415703.3 49176085 946344 complement(1232500..1233030) 1 NC_000913.3 reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella.; oxidoreductase that catalyzes reoxidation of DsbA protein disulfide isomerase I 1233030 dsbB 946344 dsbB Escherichia coli str. K-12 substr. MG1655 oxidoreductase that catalyzes reoxidation of DsbA protein disulfide isomerase I NP_415703.3 1232500 R 511145 CDS NP_415704.1 16129149 944822 complement(1233176..1234717) 1 NC_000913.3 Na+/H+ antiporter, pH independent; sodium:proton antiporter 1234717 nhaB 944822 nhaB Escherichia coli str. K-12 substr. MG1655 sodium:proton antiporter NP_415704.1 1233176 R 511145 CDS NP_415705.1 16129150 948652 1234938..1235657 1 NC_000913.3 negative regulator for fad regulon, and positive activator of fabA; fatty acid metabolism regulon transcriptional regulator 1235657 fadR 948652 fadR Escherichia coli str. K-12 substr. MG1655 fatty acid metabolism regulon transcriptional regulator NP_415705.1 1234938 D 511145 CDS NP_415706.1 16129151 946365 complement(1235709..1237241) 1 NC_000913.3 SpoVR family stationary phase protein 1237241 ycgB 946365 ycgB Escherichia coli str. K-12 substr. MG1655 SpoVR family stationary phase protein NP_415706.1 1235709 R 511145 CDS NP_415707.1 16129152 945752 1237571..1238869 1 NC_000913.3 D-amino acid dehydrogenase subunit; D-amino acid dehydrogenase 1238869 dadA 945752 dadA Escherichia coli str. K-12 substr. MG1655 D-amino acid dehydrogenase NP_415707.1 1237571 D 511145 CDS NP_415708.1 16129153 945754 1238879..1239949 1 NC_000913.3 alanine racemase 2, catabolic; alanine racemase, catabolic, PLP-binding 1239949 dadX 945754 dadX Escherichia coli str. K-12 substr. MG1655 alanine racemase, catabolic, PLP-binding NP_415708.1 1238879 D 511145 CDS NP_415709.2 90111230 945755 complement(1240335..1242071) 1 NC_000913.3 putative cation/proton antiporter 1242071 cvrA 945755 cvrA Escherichia coli str. K-12 substr. MG1655 putative cation/proton antiporter NP_415709.2 1240335 R 511145 CDS NP_415710.1 16129155 945756 complement(1242166..1243080) 1 NC_000913.3 murein tetrapeptide carboxypeptidase; LD-carboxypeptidase A 1243080 ldcA 945756 ldcA Escherichia coli str. K-12 substr. MG1655 murein tetrapeptide carboxypeptidase; LD-carboxypeptidase A NP_415710.1 1242166 R 511145 CDS NP_415711.2 90111231 945655 1243180..1243791 1 NC_000913.3 murein transglycosylase E; lytic murein endotransglycosylase E 1243791 emtA 945655 emtA Escherichia coli str. K-12 substr. MG1655 lytic murein endotransglycosylase E NP_415711.2 1243180 D 511145 CDS NP_415712.1 16129157 947609 complement(1243793..1244527) 1 NC_000913.3 flagellar velocity braking protein, c-di-GMP-regulated 1244527 ycgR 947609 ycgR Escherichia coli str. K-12 substr. MG1655 flagellar velocity braking protein, c-di-GMP-regulated NP_415712.1 1243793 R 511145 CDS NP_415713.1 16129158 945760 1244728..1244982 1 NC_000913.3 transglycosylase asociated protein; UPF0410 family putative inner membrane protein 1244982 ymgE 945760 ymgE Escherichia coli str. K-12 substr. MG1655 UPF0410 family putative inner membrane protein NP_415713.1 1244728 D 511145 CDS NP_415714.1 16129159 945761 1245160..1245600 1 NC_000913.3 uncharacterized protein 1245600 ycgY 945761 ycgY Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_415714.1 1245160 D 511145 CDS NP_415715.1 16129160 945757 complement(1245679..1247376) 1 NC_000913.3 trehalase, periplasmic; periplasmic trehalase 1247376 treA 945757 treA Escherichia coli str. K-12 substr. MG1655 periplasmic trehalase NP_415715.1 1245679 R 511145 CDS NP_415716.4 226524708 945749 complement(1247696..1249114) 1 NC_000913.3 PTS hybrid protein; putative dihydroxyacetone-specific PTS enzymes: HPr component/EI component 1249114 dhaM 945749 dhaM Escherichia coli str. K-12 substr. MG1655 putative dihydroxyacetone-specific PTS enzymes: HPr component/EI component NP_415716.4 1247696 R 511145 CDS NP_415717.1 16129162 945748 complement(1249125..1249757) 1 NC_000913.3 dihydroxyacetone kinase, C-terminal domain 1249757 dhaL 945748 dhaL Escherichia coli str. K-12 substr. MG1655 dihydroxyacetone kinase, C-terminal domain NP_415717.1 1249125 R 511145 CDS NP_415718.6 162135900 945747 complement(1249768..1250838) 1 NC_000913.3 dihydroxyacetone kinase, PTS-dependent, dihydroxyacetone-binding subunit 1250838 dhaK 945747 dhaK Escherichia coli str. K-12 substr. MG1655 dihydroxyacetone kinase, PTS-dependent, dihydroxyacetone-binding subunit NP_415718.6 1249768 R 511145 CDS NP_415719.2 90111234 945743 1251066..1252985 1 NC_000913.3 dhaKLM operon transcription activator 1252985 dhaR 945743 dhaR Escherichia coli str. K-12 substr. MG1655 dhaKLM operon transcription activator NP_415719.2 1251066 D 511145 CDS NP_415720.1 16129165 945767 complement(1253085..1255952) 1 NC_000913.3 putative adhesion and penetration protein; putative adhesin 1255952 ycgV 945767 ycgV Escherichia coli str. K-12 substr. MG1655 putative adhesin NP_415720.1 1253085 R 511145 CDS NP_415721.1 16129166 945769 complement(1256721..1257812) 1 NC_000913.3 putative GTP-binding protein; catalase inhibitor protein; ATPase, K+-dependent, ribosome-associated 1257812 ychF 945769 ychF Escherichia coli str. K-12 substr. MG1655 catalase inhibitor protein; ATPase, K+-dependent, ribosome-associated NP_415721.1 1256721 R 511145 CDS NP_415722.1 16129167 945765 complement(1257929..1258513) 1 NC_000913.3 peptidyl-tRNA hydrolase 1258513 pth 945765 pth Escherichia coli str. K-12 substr. MG1655 peptidyl-tRNA hydrolase NP_415722.1 1257929 R 511145 CDS NP_415723.1 16129168 945762 1258791..1259069 1 NC_000913.3 DUF2583 family putative inner membrane protein 1259069 ychH 945762 ychH Escherichia coli str. K-12 substr. MG1655 DUF2583 family putative inner membrane protein NP_415723.1 1258791 D 511145 CDS NP_415724.2 90111235 945770 complement(1259124..1260803) 1 NC_000913.3 putative sulfate transporter; C4-dicarboxylic acid transporter 1260803 dauA 945770 dauA Escherichia coli str. K-12 substr. MG1655 C4-dicarboxylic acid transporter NP_415724.2 1259124 R 511145 CDS NP_415725.1 16129170 945772 complement(1260928..1261875) 1 NC_000913.3 phosphoribosylpyrophosphate synthetase; phosphoribosylpyrophosphate synthase 1261875 prs 945772 prs Escherichia coli str. K-12 substr. MG1655 phosphoribosylpyrophosphate synthase NP_415725.1 1260928 R 511145 CDS NP_415726.1 16129171 945774 complement(1262026..1262877) 1 NC_000913.3 4-diphosphocytidyl-2-C-methylerythritol kinase 1262877 ispE 945774 ispE Escherichia coli str. K-12 substr. MG1655 4-diphosphocytidyl-2-C-methylerythritol kinase NP_415726.1 1262026 R 511145 CDS NP_415727.1 16129172 945775 complement(1262877..1263500) 1 NC_000913.3 outer-membrane lipoprotein; lipoprotein localization factor 1263500 lolB 945775 lolB Escherichia coli str. K-12 substr. MG1655 lipoprotein localization factor NP_415727.1 1262877 R 511145 CDS NP_415728.1 16129173 945777 1263714..1264970 1 NC_000913.3 glutamyl-tRNA reductase; glutamyl tRNA reductase 1264970 hemA 945777 hemA Escherichia coli str. K-12 substr. MG1655 glutamyl tRNA reductase NP_415728.1 1263714 D 511145 CDS NP_415729.1 16129174 949002 1265012..1266094 1 NC_000913.3 peptide chain release factor RF-1 1266094 prfA 949002 prfA Escherichia coli str. K-12 substr. MG1655 peptide chain release factor RF-1 NP_415729.1 1265012 D 511145 CDS NP_415730.1 16129175 945779 1266094..1266927 1 NC_000913.3 possible protoporphyrinogen oxidase; N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 1266927 prmC 945779 prmC Escherichia coli str. K-12 substr. MG1655 N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 NP_415730.1 1266094 D 511145 CDS NP_415731.1 16129176 945781 1266924..1267316 1 NC_000913.3 SIRB family inner membrane protein 1267316 ychQ 945781 ychQ Escherichia coli str. K-12 substr. MG1655 SIRB family inner membrane protein NP_415731.1 1266924 D 511145 CDS NP_415732.1 16129177 945784 1267320..1268129 1 NC_000913.3 transglutaminase-like TPR-repeat protein 1268129 ychA 945784 ychA Escherichia coli str. K-12 substr. MG1655 transglutaminase-like TPR-repeat protein NP_415732.1 1267320 D 511145 CDS NP_415733.1 16129178 945785 1268165..1269019 1 NC_000913.3 2-dehydro-3-deoxyphosphooctulonate aldolase; 3-deoxy-D-manno-octulosonate 8-phosphate synthase 1269019 kdsA 945785 kdsA Escherichia coli str. K-12 substr. MG1655 3-deoxy-D-manno-octulosonate 8-phosphate synthase NP_415733.1 1268165 D 511145 CDS YP_025297.1 49176087 2847733 complement(1269168..1269275) 1 NC_000913.3 small toxic polypeptide; toxic polypeptide, small 1269275 ldrA 2847733 ldrA Escherichia coli str. K-12 substr. MG1655 toxic polypeptide, small YP_025297.1 1269168 R 511145 CDS YP_025298.1 49176088 2847735 complement(1269703..1269810) 1 NC_000913.3 small toxic polypeptide; toxic polypeptide, small 1269810 ldrB 2847735 ldrB Escherichia coli str. K-12 substr. MG1655 toxic polypeptide, small YP_025298.1 1269703 R 511145 CDS YP_025299.1 49176089 2847775 complement(1270238..1270345) 1 NC_000913.3 small toxic polypeptide; toxic polypeptide, small 1270345 ldrC 2847775 ldrC Escherichia coli str. K-12 substr. MG1655 toxic polypeptide, small YP_025299.1 1270238 R 511145 CDS NP_415734.1 16129179 945790 complement(1270749..1271849) 1 NC_000913.3 sodium-calcium/proton antiporter; calcium/sodium:proton antiporter 1271849 chaA 945790 chaA Escherichia coli str. K-12 substr. MG1655 calcium/sodium:proton antiporter NP_415734.1 1270749 R 511145 CDS NP_415735.1 16129180 945792 1272119..1272349 1 NC_000913.3 cation transport regulator 1272349 chaB 945792 chaB Escherichia coli str. K-12 substr. MG1655 cation transport regulator NP_415735.1 1272119 D 511145 CDS NP_415736.2 145698247 945793 1272507..1273202 1 NC_000913.3 cation transport regulator 1273202 chaC 945793 chaC Escherichia coli str. K-12 substr. MG1655 cation transport regulator NP_415736.2 1272507 D 511145 CDS NP_415737.1 16129182 945794 complement(1273246..1273599) 1 NC_000913.3 putative sulfur relay protein 1273599 ychN 945794 ychN Escherichia coli str. K-12 substr. MG1655 putative sulfur relay protein NP_415737.1 1273246 R 511145 CDS NP_415738.2 145698248 945801 1273784..1275178 1 NC_000913.3 conserved protein, invasin-like; putative invasin 1275178 ychO 945801 ychO Escherichia coli str. K-12 substr. MG1655 putative invasin NP_415738.2 1273784 D 511145 CDS NP_415739.1 16129184 945795 complement(1275179..1275829) 1 NC_000913.3 pleiotrophic regulation of anaerobic respiration: response regulator for nar, frd, dms and tor genes; response regulator in two-component regulatory system with NarX (or NarQ) 1275829 narL 945795 narL Escherichia coli str. K-12 substr. MG1655 response regulator in two-component regulatory system with NarX (or NarQ) NP_415739.1 1275179 R 511145 CDS NP_415740.1 16129185 945788 complement(1275822..1277618) 1 NC_000913.3 nitrate/nitrate sensor, histidine protein kinase acts on NarL regulator; sensory histidine kinase in two-component regulatory system with NarL 1277618 narX 945788 narX Escherichia coli str. K-12 substr. MG1655 sensory histidine kinase in two-component regulatory system with NarL NP_415740.1 1275822 R 511145 CDS NP_415741.1 16129186 945783 1277957..1279348 1 NC_000913.3 nitrite extrusion protein; nitrate/nitrite transporter 1279348 narK 945783 narK Escherichia coli str. K-12 substr. MG1655 nitrate/nitrite transporter NP_415741.1 1277957 D 511145 CDS NP_415742.1 16129187 945782 1279864..1283607 1 NC_000913.3 nitrate reductase 1, alpha subunit 1283607 narG 945782 narG Escherichia coli str. K-12 substr. MG1655 nitrate reductase 1, alpha subunit NP_415742.1 1279864 D 511145 CDS NP_415743.1 16129188 945780 1283604..1285142 1 NC_000913.3 nitrate reductase 1, beta subunit; nitrate reductase 1, beta (Fe-S) subunit 1285142 narH 945780 narH Escherichia coli str. K-12 substr. MG1655 nitrate reductase 1, beta (Fe-S) subunit NP_415743.1 1283604 D 511145 CDS NP_415744.1 16129189 945807 1285139..1285849 1 NC_000913.3 nitrate reductase 1, delta subunit, assembly function; molybdenum-cofactor-assembly chaperone subunit (delta subunit) of nitrate reductase 1 1285849 narJ 945807 narJ Escherichia coli str. K-12 substr. MG1655 molybdenum-cofactor-assembly chaperone subunit (delta subunit) of nitrate reductase 1 NP_415744.1 1285139 D 511145 CDS NP_415745.1 16129190 945808 1285849..1286526 1 NC_000913.3 nitrate reductase 1, cytochrome b(NR), gamma subunit; nitrate reductase 1, gamma (cytochrome b(NR)) subunit 1286526 narI 945808 narI Escherichia coli str. K-12 substr. MG1655 nitrate reductase 1, gamma (cytochrome b(NR)) subunit NP_415745.1 1285849 D 511145 CDS NP_415747.2 145698249 946224 complement(1287087..1287176) 1 NC_000913.3 a protamine-like protein; protamine-like protein 1287176 tpr 946224 tpr Escherichia coli str. K-12 substr. MG1655 protamine-like protein NP_415747.2 1287087 R 511145 CDS NP_415748.1 16129193 945827 complement(1287782..1288624) 1 NC_000913.3 formyltetrahydrofolate deformylase; for purT-dependent FGAR synthesis; formyltetrahydrofolate hydrolase 1288624 purU 945827 purU Escherichia coli str. K-12 substr. MG1655 formyltetrahydrofolate hydrolase NP_415748.1 1287782 R 511145 CDS NP_415749.1 16129194 945828 complement(1288674..1289132) 1 NC_000913.3 UPF0225 family protein 1289132 ychJ 945828 ychJ Escherichia coli str. K-12 substr. MG1655 UPF0225 family protein NP_415749.1 1288674 R 511145 CDS NP_415750.2 226524709 945725 1289245..1290150 1 NC_000913.3 putative patatin-like family phospholipase 1290150 rssA 945725 rssA Escherichia coli str. K-12 substr. MG1655 putative patatin-like family phospholipase NP_415750.2 1289245 D 511145 CDS NP_415751.1 16129196 945855 1290242..1291255 1 NC_000913.3 Hnr protein; PcnB-degradosome interaction factor; response regulator 1291255 rssB 945855 rssB Escherichia coli str. K-12 substr. MG1655 PcnB-degradosome interaction factor; response regulator NP_415751.1 1290242 D 511145 CDS NP_415752.1 16129197 945730 1291457..1292365 1 NC_000913.3 glucose-1-phosphate uridylyltransferase 1292365 galU 945730 galU Escherichia coli str. K-12 substr. MG1655 glucose-1-phosphate uridylyltransferase NP_415752.1 1291457 D 511145 CDS NP_415753.1 16129198 945829 complement(1292509..1292922) 1 NC_000913.3 DNA-binding protein HLP-II (HU, BH2, HD, NS); pleiotropic regulator; global DNA-binding transcriptional dual regulator H-NS 1292922 hns 945829 hns Escherichia coli str. K-12 substr. MG1655 global DNA-binding transcriptional dual regulator H-NS NP_415753.1 1292509 R 511145 CDS NP_415754.1 16129199 945834 1293527..1294144 1 NC_000913.3 thymidine kinase; thymidine kinase/deoxyuridine kinase 1294144 tdk 945834 tdk Escherichia coli str. K-12 substr. MG1655 thymidine kinase/deoxyuridine kinase NP_415754.1 1293527 D 511145 CDS b4573 4056037 complement(join(1294426..1294992,1294992..1295141,1295140..1295322)) 1 NC_000913.3 pseudogene, transposase homolog; <NULL_VALUE> 1295322 insZ 4056037 insZ Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 1294426 R 511145 CDS NP_415757.1 16129202 945837 complement(1295446..1298121) 1 NC_000913.3 CoA-linked acetaldehyde dehydrogenase and iron-dependent alcohol dehydrogenase; pyruvate-formate-lyase deactivase; fused acetaldehyde-CoA dehydrogenase/iron-dependent alcohol dehydrogenase/pyruvate-formate lyase deactivase 1298121 adhE 945837 adhE Escherichia coli str. K-12 substr. MG1655 fused acetaldehyde-CoA dehydrogenase/iron-dependent alcohol dehydrogenase/pyruvate-formate lyase deactivase NP_415757.1 1295446 R 511145 CDS NP_415758.1 16129203 945836 1298598..1299245 1 NC_000913.3 putative channel protein; UPF0056 family inner membrane protein 1299245 ychE 945836 ychE Escherichia coli str. K-12 substr. MG1655 UPF0056 family inner membrane protein NP_415758.1 1298598 D 511145 CDS NP_415759.1 16129204 945830 1301182..1302813 1 NC_000913.3 oligopeptide transport; periplasmic binding protein; periplasmic-binding component of ABC superfamily; oligopeptide transporter subunit 1302813 oppA 945830 oppA Escherichia coli str. K-12 substr. MG1655 oligopeptide transporter subunit NP_415759.1 1301182 D 511145 CDS NP_415760.1 16129205 945823 1302899..1303819 1 NC_000913.3 oligopeptide transport permease protein; membrane component of ABC superfamily; oligopeptide transporter subunit 1303819 oppB 945823 oppB Escherichia coli str. K-12 substr. MG1655 oligopeptide transporter subunit NP_415760.1 1302899 D 511145 CDS NP_415761.1 16129206 945810 1303834..1304742 1 NC_000913.3 homolog of Salmonella oligopeptide transport permease protein; membrane component of ABC superfamily; oligopeptide transporter subunit 1304742 oppC 945810 oppC Escherichia coli str. K-12 substr. MG1655 oligopeptide transporter subunit NP_415761.1 1303834 D 511145 CDS YP_025300.1 49176090 945802 1304754..1305767 1 NC_000913.3 homolog of Salmonella ATP-binding protein of oligopeptide ABC transport system; oligopeptide transporter subunit 1305767 oppD 945802 oppD Escherichia coli str. K-12 substr. MG1655 oligopeptide transporter subunit YP_025300.1 1304754 D 511145 CDS NP_415763.1 16129208 945818 1305764..1306768 1 NC_000913.3 homolog of Salmonella ATP-binding protein of oligopeptide ABC transport system; oligopeptide transporter subunit 1306768 oppF 945818 oppF Escherichia coli str. K-12 substr. MG1655 oligopeptide transporter subunit NP_415763.1 1305764 D 511145 CDS NP_415764.4 90111236 945819 complement(1306821..1307150) 1 NC_000913.3 UPF0263 family protein 1307150 yciU 945819 yciU Escherichia coli str. K-12 substr. MG1655 UPF0263 family protein NP_415764.4 1306821 R 511145 CDS NP_415765.1 16129210 945821 complement(1307185..1308645) 1 NC_000913.3 cardiolipin synthase, a major membrane phospholipid; novobiocin sensitivity; cardiolipin synthase 1 1308645 clsA 945821 clsA Escherichia coli str. K-12 substr. MG1655 cardiolipin synthase 1 NP_415765.1 1307185 R 511145 CDS YP_001165316.1 145698250 5061502 1308788..1308961 1 NC_000913.3 uncharacterized protein 1308961 yciY 5061502 yciY Escherichia coli str. K-12 substr. MG1655 uncharacterized protein YP_001165316.1 1308788 D 511145 CDS NP_415766.1 16129211 945841 complement(1309016..1310269) 1 NC_000913.3 putative potassium channel protein (VIC family); voltage-gated potassium channel 1310269 kch 945841 kch Escherichia coli str. K-12 substr. MG1655 voltage-gated potassium channel NP_415766.1 1309016 R 511145 CDS NP_415767.2 90111237 949085 complement(1310569..1310865) 1 NC_000913.3 putative DGPF domain-containing enzyme 1310865 yciI 949085 yciI Escherichia coli str. K-12 substr. MG1655 putative DGPF domain-containing enzyme NP_415767.2 1310569 R 511145 CDS NP_415768.1 16129213 945843 1311089..1311808 1 NC_000913.3 energy transducer; uptake of iron, cyanocobalimin; sensitivity to phages, colicins; membrane spanning protein in TonB-ExbB-ExbD transport complex 1311808 tonB 945843 tonB Escherichia coli str. K-12 substr. MG1655 membrane spanning protein in TonB-ExbB-ExbD transport complex NP_415768.1 1311089 D 511145 CDS NP_415769.1 16129214 946634 complement(1311848..1312246) 1 NC_000913.3 acyl-CoA esterase 1312246 yciA 946634 yciA Escherichia coli str. K-12 substr. MG1655 acyl-CoA esterase NP_415769.1 1311848 R 511145 CDS NP_415770.1 16129215 946228 complement(1312351..1312890) 1 NC_000913.3 IspA family inner membrane protein 1312890 yciB 946228 yciB Escherichia coli str. K-12 substr. MG1655 IspA family inner membrane protein NP_415770.1 1312351 R 511145 CDS NP_415771.1 16129216 945844 complement(1312920..1313663) 1 NC_000913.3 UPF0259 family inner membrane protein 1313663 yciC 945844 yciC Escherichia coli str. K-12 substr. MG1655 UPF0259 family inner membrane protein NP_415771.1 1312920 R 511145 CDS NP_415772.1 16129217 945128 1314020..1314658 1 NC_000913.3 putative outer membrane protein; outer membrane protein W 1314658 ompW 945128 ompW Escherichia coli str. K-12 substr. MG1655 outer membrane protein W NP_415772.1 1314020 D 511145 CDS NP_415773.1 16129218 946871 complement(1314718..1315224) 1 NC_000913.3 putative rubrerythrin/ferritin-like metal-binding protein 1315224 yciE 946871 yciE Escherichia coli str. K-12 substr. MG1655 putative rubrerythrin/ferritin-like metal-binding protein NP_415773.1 1314718 R 511145 CDS NP_415774.1 16129219 947133 complement(1315270..1315770) 1 NC_000913.3 putative structural proteins; putative rubrerythrin/ferritin-like metal-binding protein 1315770 yciF 947133 yciF Escherichia coli str. K-12 substr. MG1655 putative rubrerythrin/ferritin-like metal-binding protein NP_415774.1 1315270 R 511145 CDS NP_415775.4 90111238 947489 complement(1315856..1316035) 1 NC_000913.3 KGG family protein 1316035 yciG 947489 yciG Escherichia coli str. K-12 substr. MG1655 KGG family protein NP_415775.4 1315856 R 511145 CDS NP_415776.1 16129221 946204 complement(1316416..1317222) 1 NC_000913.3 tryptophan synthase, alpha protein; tryptophan synthase, alpha subunit 1317222 trpA 946204 trpA Escherichia coli str. K-12 substr. MG1655 tryptophan synthase, alpha subunit NP_415776.1 1316416 R 511145 CDS NP_415777.1 16129222 945768 complement(1317222..1318415) 1 NC_000913.3 tryptophan synthase, beta protein; tryptophan synthase, beta subunit 1318415 trpB 945768 trpB Escherichia coli str. K-12 substr. MG1655 tryptophan synthase, beta subunit NP_415777.1 1317222 R 511145 CDS NP_415778.3 635341464 945519 complement(1318427..1319788) 1 NC_000913.3 N-(5-phosphoribosyl)anthranilate isomerase and indole-3-glycerolphosphate synthetase; fused indole-3-glycerolphosphate synthetase/N-(5-phosphoribosyl)anthranilate isomerase 1319788 trpC 945519 trpC Escherichia coli str. K-12 substr. MG1655 fused indole-3-glycerolphosphate synthetase/N-(5-phosphoribosyl)anthranilate isomerase NP_415778.3 1318427 R 511145 CDS NP_415779.1 16129224 945109 complement(1319789..1321384) 1 NC_000913.3 anthranilate synthase component II, glutamine amidotransferase and phosphoribosylanthranilate transferase; fused glutamine amidotransferase (component II) of anthranilate synthase/anthranilate phosphoribosyl transferase 1321384 trpD 945109 trpD Escherichia coli str. K-12 substr. MG1655 fused glutamine amidotransferase (component II) of anthranilate synthase/anthranilate phosphoribosyl transferase NP_415779.1 1319789 R 511145 CDS NP_415780.1 16129225 945846 complement(1321384..1322946) 1 NC_000913.3 anthranilate synthase component I; component I of anthranilate synthase 1322946 trpE 945846 trpE Escherichia coli str. K-12 substr. MG1655 component I of anthranilate synthase NP_415780.1 1321384 R 511145 CDS NP_415781.1 16129226 945856 complement(1323038..1323082) 1 NC_000913.3 trp operon leader peptide 1323082 trpL 945856 trpL Escherichia coli str. K-12 substr. MG1655 trp operon leader peptide NP_415781.1 1323038 R 511145 CDS NP_415782.1 16129227 945857 1323220..1324101 1 NC_000913.3 putative enzymes; PHP domain protein 1324101 yciV 945857 yciV Escherichia coli str. K-12 substr. MG1655 PHP domain protein NP_415782.1 1323220 D 511145 CDS NP_415783.6 162135901 945854 1324098..1324718 1 NC_000913.3 putative RNA binding protein 1324718 yciO 945854 yciO Escherichia coli str. K-12 substr. MG1655 putative RNA binding protein NP_415783.6 1324098 D 511145 CDS NP_415784.1 16129229 945850 1324746..1326641 1 NC_000913.3 enhancer of membrane protein expression; putative inner membrane protein 1326641 yciQ 945850 yciQ Escherichia coli str. K-12 substr. MG1655 enhancer of membrane protein expression; putative inner membrane protein NP_415784.1 1324746 D 511145 CDS NP_415785.1 16129230 945840 1326852..1327727 1 NC_000913.3 23S rRNA pseudouridine(2605) synthase 1327727 rluB 945840 rluB Escherichia coli str. K-12 substr. MG1655 23S rRNA pseudouridine(2605) synthase NP_415785.1 1326852 D 511145 CDS NP_415786.1 16129231 945839 complement(1327767..1328357) 1 NC_000913.3 cob(I)alamin adenolsyltransferase; cob(I)yrinic acid a,c-diamide adenosyltransferase 1328357 btuR 945839 btuR Escherichia coli str. K-12 substr. MG1655 cob(I)yrinic acid a,c-diamide adenosyltransferase NP_415786.1 1327767 R 511145 CDS NP_415787.1 16129232 945838 complement(1328354..1329112) 1 NC_000913.3 putative oxidoreductase; putative EmrKY-TolC system oxoacyl-(acyl carrier protein) reductase 1329112 yciK 945838 yciK Escherichia coli str. K-12 substr. MG1655 putative EmrKY-TolC system oxoacyl-(acyl carrier protein) reductase NP_415787.1 1328354 R 511145 CDS NP_415788.1 16129233 945858 1329332..1330381 1 NC_000913.3 putative protease; inner membrane protein, S49 peptidase family protein 1330381 sohB 945858 sohB Escherichia coli str. K-12 substr. MG1655 inner membrane protein, S49 peptidase family protein NP_415788.1 1329332 D 511145 CDS NP_415789.1 16129234 945860 complement(1330417..1330668) 1 NC_000913.3 DUF2498 protein YciN 1330668 yciN 945860 yciN Escherichia coli str. K-12 substr. MG1655 DUF2498 protein YciN NP_415789.1 1330417 R 511145 CDS NP_415790.1 16129235 945862 1331048..1333645 1 NC_000913.3 DNA topoisomerase type I, omega protein; DNA topoisomerase I, omega subunit 1333645 topA 945862 topA Escherichia coli str. K-12 substr. MG1655 DNA topoisomerase I, omega subunit NP_415790.1 1331048 D 511145 CDS NP_415791.1 16129236 945771 1333855..1334829 1 NC_000913.3 positive transcriptional regulator for cysteine regulon; N-acetylserine-responsive cysteine regulon transcriptional activator; autorepressor 1334829 cysB 945771 cysB Escherichia coli str. K-12 substr. MG1655 N-acetylserine-responsive cysteine regulon transcriptional activator; autorepressor NP_415791.1 1333855 D 511145 CDS YP_588449.2 635341465 1450256 1335124..1335288 1 NC_000913.3 uncharacterized protein 1335288 ymiA 1450256 ymiA Escherichia coli str. K-12 substr. MG1655 uncharacterized protein YP_588449.2 1335124 D 511145 CDS YP_588450.2 145698251 1450257 1335291..1335458 1 NC_000913.3 uncharacterized protein 1335458 yciX 1450257 yciX Escherichia coli str. K-12 substr. MG1655 uncharacterized protein YP_588450.2 1335291 D 511145 CDS NP_415792.1 16129237 946724 1335831..1338506 1 NC_000913.3 aconitate hydrase 1; aconitate hydratase 1 1338506 acnA 946724 acnA Escherichia coli str. K-12 substr. MG1655 aconitate hydratase 1 NP_415792.1 1335831 D 511145 CDS NP_415793.1 16129238 945763 complement(1338570..1339160) 1 NC_000913.3 GTP cyclohydrolase II 1339160 ribA 945763 ribA Escherichia coli str. K-12 substr. MG1655 GTP cyclohydrolase II NP_415793.1 1338570 R 511145 CDS NP_415794.1 16129239 945863 1339330..1340094 1 NC_000913.3 non-essential phosphatidylglycerophosphate phosphatase, membrane bound; phosphatidylglycerophosphatase B 1340094 pgpB 945863 pgpB Escherichia coli str. K-12 substr. MG1655 phosphatidylglycerophosphatase B NP_415794.1 1339330 D 511145 CDS NP_415795.1 16129240 944936 1340243..1340551 1 NC_000913.3 DUF1049 family inner membrane protein, function unknown 1340551 yciS 944936 yciS Escherichia coli str. K-12 substr. MG1655 DUF1049 family inner membrane protein, function unknown NP_415795.1 1340243 D 511145 CDS NP_415796.1 16129241 944858 1340558..1341727 1 NC_000913.3 putative heat shock protein; envelope integrity maintenance protein; EnvC-interacting protein 1341727 yciM 944858 yciM Escherichia coli str. K-12 substr. MG1655 envelope integrity maintenance protein; EnvC-interacting protein NP_415796.1 1340558 D 511145 CDS NP_415797.1 16129242 947121 1341921..1342658 1 NC_000913.3 orotidine-5'-phosphate decarboxylase 1342658 pyrF 947121 pyrF Escherichia coli str. K-12 substr. MG1655 orotidine-5'-phosphate decarboxylase NP_415797.1 1341921 D 511145 CDS NP_415798.2 90111241 947058 1342658..1342984 1 NC_000913.3 initiation factor function partial mimic, SUI1 family 1342984 yciH 947058 yciH Escherichia coli str. K-12 substr. MG1655 initiation factor function partial mimic, SUI1 family NP_415798.2 1342658 D 511145 CDS NP_415799.1 16129244 945866 complement(1343110..1343328) 1 NC_000913.3 osmotically inducible lipoprotein; lipoprotein 1343328 osmB 945866 osmB Escherichia coli str. K-12 substr. MG1655 lipoprotein NP_415799.1 1343110 R 511145 CDS NP_415800.1 16129245 945869 complement(1343597..1344346) 1 NC_000913.3 putative DEOR-type transcriptional regulator; global regulator of transcription; DeoR family 1344346 yciT 945869 yciT Escherichia coli str. K-12 substr. MG1655 global regulator of transcription; DeoR family NP_415800.1 1343597 R 511145 CDS YP_001165317.1 145698252 5061509 complement(1344436..1344609) 1 NC_000913.3 uncharacterized protein 1344609 yciZ 5061509 yciZ Escherichia coli str. K-12 substr. MG1655 uncharacterized protein YP_001165317.1 1344436 R 511145 CDS NP_415801.1 16129246 945868 complement(1344757..1346742) 1 NC_000913.3 cyclic-di-GMP phosphodiesterase; csgD regulator; modulator of Rnase II stability 1346742 gmr 945868 gmr Escherichia coli str. K-12 substr. MG1655 cyclic-di-GMP phosphodiesterase; csgD regulator; modulator of Rnase II stability NP_415801.1 1344757 R 511145 CDS YP_002791239.1 226524710 7751616 1346796..1346900 1 NC_000913.3 uncharacterized protein 1346900 ymiB 7751616 ymiB Escherichia coli str. K-12 substr. MG1655 uncharacterized protein YP_002791239.1 1346796 D 511145 CDS NP_415802.1 16129247 945864 complement(1346978..1348912) 1 NC_000913.3 RNase II, mRNA degradation; ribonuclease II 1348912 rnb 945864 rnb Escherichia coli str. K-12 substr. MG1655 ribonuclease II NP_415802.1 1346978 R 511145 CDS NP_415803.2 90111242 945859 complement(1348980..1350107) 1 NC_000913.3 putative oxidoreductase 1350107 yciW 945859 yciW Escherichia coli str. K-12 substr. MG1655 putative oxidoreductase NP_415803.2 1348980 R 511145 CDS NP_415804.1 16129249 945870 complement(1350251..1351039) 1 NC_000913.3 enoyl-[acyl-carrier-protein] reductase (NADH); enoyl-[acyl-carrier-protein] reductase, NADH-dependent 1351039 fabI 945870 fabI Escherichia coli str. K-12 substr. MG1655 enoyl-[acyl-carrier-protein] reductase, NADH-dependent NP_415804.1 1350251 R 511145 CDS NP_415805.1 16129250 945871 complement(1351407..1351760) 1 NC_000913.3 DUF559 family endonuclease-related protein 1351760 ycjD 945871 ycjD Escherichia coli str. K-12 substr. MG1655 DUF559 family endonuclease-related protein NP_415805.1 1351407 R 511145 CDS NP_415806.1 16129251 945335 complement(1351828..1352634) 1 NC_000913.3 putative ATP-binding protein of peptide transport system; antimicrobial peptide transport ABC system ATP-binding protein 1352634 sapF 945335 sapF Escherichia coli str. K-12 substr. MG1655 antimicrobial peptide transport ABC system ATP-binding protein NP_415806.1 1351828 R 511145 CDS NP_415807.1 16129252 946203 complement(1352636..1353628) 1 NC_000913.3 putative ATP-binding protein of peptide transport system; antimicrobial peptide transport ABC system ATP-binding protein 1353628 sapD 946203 sapD Escherichia coli str. K-12 substr. MG1655 antimicrobial peptide transport ABC system ATP-binding protein NP_415807.1 1352636 R 511145 CDS NP_415808.1 16129253 945266 complement(1353628..1354518) 1 NC_000913.3 homolog of Salmonella peptide transport permease protein; membrane component of ABC superfamily; antimicrobial peptide transport ABC transporter permease 1354518 sapC 945266 sapC Escherichia coli str. K-12 substr. MG1655 antimicrobial peptide transport ABC transporter permease NP_415808.1 1353628 R 511145 CDS NP_415809.1 16129254 946191 complement(1354505..1355470) 1 NC_000913.3 homolog of Salmonella peptide transport permease protein; membrane component of ABC superfamily; antimicrobial peptide transport ABC transporter permease 1355470 sapB 946191 sapB Escherichia coli str. K-12 substr. MG1655 antimicrobial peptide transport ABC transporter permease NP_415809.1 1354505 R 511145 CDS NP_415810.1 16129255 945873 complement(1355467..1357110) 1 NC_000913.3 homolog of Salmonella peptide transport periplasmic protein; periplasmic-binding component of ABC superfamily; antimicrobial peptide transport ABC transporter periplasmic binding protein 1357110 sapA 945873 sapA Escherichia coli str. K-12 substr. MG1655 antimicrobial peptide transport ABC transporter periplasmic binding protein NP_415810.1 1355467 R 511145 CDS NP_415811.1 16129256 945874 complement(1357423..1357668) 1 NC_000913.3 DUF2543 family protein 1357668 ymjA 945874 ymjA Escherichia coli str. K-12 substr. MG1655 DUF2543 family protein NP_415811.1 1357423 R 511145 CDS NP_415812.4 90111243 946287 complement(1357802..1359187) 1 NC_000913.3 putative amino acid/amine transport protein; putrescine importer 1359187 puuP 946287 puuP Escherichia coli str. K-12 substr. MG1655 putrescine importer NP_415812.4 1357802 R 511145 CDS NP_415813.4 90111244 946202 complement(1359490..1360908) 1 NC_000913.3 putative glutamine synthetase; glutamate--putrescine ligase 1360908 puuA 946202 puuA Escherichia coli str. K-12 substr. MG1655 glutamate--putrescine ligase NP_415813.4 1359490 R 511145 CDS NP_415814.4 90111245 945882 1361120..1361884 1 NC_000913.3 probable amidotransferase subunit; gamma-glutamyl-gamma-aminobutyrate hydrolase 1361884 puuD 945882 puuD Escherichia coli str. K-12 substr. MG1655 gamma-glutamyl-gamma-aminobutyrate hydrolase NP_415814.4 1361120 D 511145 CDS NP_415815.1 16129260 945886 1361911..1362468 1 NC_000913.3 repressor for the divergent puu operons, putrescine inducible 1362468 puuR 945886 puuR Escherichia coli str. K-12 substr. MG1655 repressor for the divergent puu operons, putrescine inducible NP_415815.1 1361911 D 511145 CDS NP_415816.1 16129261 947003 1362743..1364230 1 NC_000913.3 aldehyde dehydrogenase, prefers NADP over NAD; gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; succinate semialdehyde dehydrogenase 1364230 puuC 947003 puuC Escherichia coli str. K-12 substr. MG1655 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; succinate semialdehyde dehydrogenase NP_415816.1 1362743 D 511145 CDS NP_415817.1 16129262 945072 1364232..1365512 1 NC_000913.3 probable oxidoreductase; gamma-glutamylputrescine oxidoreductase 1365512 puuB 945072 puuB Escherichia coli str. K-12 substr. MG1655 gamma-glutamylputrescine oxidoreductase NP_415817.1 1364232 D 511145 CDS NP_415818.1 16129263 945446 1365550..1366815 1 NC_000913.3 4-aminobutyrate aminotransferase; 4-aminobutyrate aminotransferase, PLP-dependent 1366815 puuE 945446 puuE Escherichia coli str. K-12 substr. MG1655 4-aminobutyrate aminotransferase, PLP-dependent NP_415818.1 1365550 D 511145 CDS NP_415819.4 90111246 945683 complement(1366935..1367912) 1 NC_000913.3 psp operon transcriptional activator 1367912 pspF 945683 pspF Escherichia coli str. K-12 substr. MG1655 psp operon transcriptional activator NP_415819.4 1366935 R 511145 CDS NP_415820.1 16129265 945887 1368079..1368747 1 NC_000913.3 phage shock protein, inner membrane protein; regulatory protein for phage-shock-protein operon 1368747 pspA 945887 pspA Escherichia coli str. K-12 substr. MG1655 regulatory protein for phage-shock-protein operon NP_415820.1 1368079 D 511145 CDS NP_415821.1 16129266 945893 1368801..1369025 1 NC_000913.3 phage shock protein; psp operon transcription co-activator 1369025 pspB 945893 pspB Escherichia coli str. K-12 substr. MG1655 psp operon transcription co-activator NP_415821.1 1368801 D 511145 CDS NP_415822.1 16129267 945499 1369025..1369384 1 NC_000913.3 phage shock protein: activates phage shock-protein expression; psp operon transcription co-activator 1369384 pspC 945499 pspC Escherichia coli str. K-12 substr. MG1655 psp operon transcription co-activator NP_415822.1 1369025 D 511145 CDS NP_415823.1 16129268 945635 1369393..1369614 1 NC_000913.3 phage shock protein; peripheral inner membrane phage-shock protein 1369614 pspD 945635 pspD Escherichia coli str. K-12 substr. MG1655 peripheral inner membrane phage-shock protein NP_415823.1 1369393 D 511145 CDS NP_415824.1 16129269 945652 1369689..1370003 1 NC_000913.3 phage shock protein; thiosulfate:cyanide sulfurtransferase (rhodanese) 1370003 pspE 945652 pspE Escherichia coli str. K-12 substr. MG1655 thiosulfate:cyanide sulfurtransferase (rhodanese) NP_415824.1 1369689 D 511145 CDS NP_415825.4 90111247 945659 1370216..1371895 1 NC_000913.3 putative polysaccharide hydrolase; alpha amylase catalytic domain family protein 1371895 ycjM 945659 ycjM Escherichia coli str. K-12 substr. MG1655 alpha amylase catalytic domain family protein NP_415825.4 1370216 D 511145 CDS NP_415826.1 16129271 945696 1371909..1373201 1 NC_000913.3 putative ABC superfamily sugar transporter periplasmic-binding protein 1373201 ycjN 945696 ycjN Escherichia coli str. K-12 substr. MG1655 putative ABC superfamily sugar transporter periplasmic-binding protein NP_415826.1 1371909 D 511145 CDS NP_415827.1 16129272 945888 1373222..1374103 1 NC_000913.3 putative binding-protein dependent transport protein; inner membrane putative ABC superfamily sugar transporter permease 1374103 ycjO 945888 ycjO Escherichia coli str. K-12 substr. MG1655 inner membrane putative ABC superfamily sugar transporter permease NP_415827.1 1373222 D 511145 CDS NP_415828.1 16129273 945892 1374090..1374932 1 NC_000913.3 putative transport system permease protein; inner membrane putative ABC superfamily sugar transporter permease 1374932 ycjP 945892 ycjP Escherichia coli str. K-12 substr. MG1655 inner membrane putative ABC superfamily sugar transporter permease NP_415828.1 1374090 D 511145 CDS NP_415829.1 16129274 945971 1374963..1376015 1 NC_000913.3 putative oxidoreductase; putative Zn-dependent NAD(P)-binding oxidoreductase 1376015 ycjQ 945971 ycjQ Escherichia coli str. K-12 substr. MG1655 putative Zn-dependent NAD(P)-binding oxidoreductase NP_415829.1 1374963 D 511145 CDS NP_415830.2 90111248 947427 1376034..1376822 1 NC_000913.3 putative TIM alpha/beta barrel enzyme 1376822 ycjR 947427 ycjR Escherichia coli str. K-12 substr. MG1655 putative TIM alpha/beta barrel enzyme NP_415830.2 1376034 D 511145 CDS NP_415831.1 16129276 948589 1376832..1377887 1 NC_000913.3 putative dehydrogenase; putative NADH-binding oxidoreductase 1377887 ycjS 948589 ycjS Escherichia coli str. K-12 substr. MG1655 putative NADH-binding oxidoreductase NP_415831.1 1376832 D 511145 CDS NP_415832.1 16129277 945895 1377884..1380151 1 NC_000913.3 putative family 65 glycosyl hydrolase 1380151 ycjT 945895 ycjT Escherichia coli str. K-12 substr. MG1655 putative family 65 glycosyl hydrolase NP_415832.1 1377884 D 511145 CDS NP_415833.1 16129278 945891 1380148..1380807 1 NC_000913.3 putative beta-phosphoglucomutase; beta-phosphoglucomutase 1380807 ycjU 945891 ycjU Escherichia coli str. K-12 substr. MG1655 beta-phosphoglucomutase NP_415833.1 1380148 D 511145 CDS b4524 4306141 join(1380821..1381777,1381777..1381902) 1 NC_000913.3 pseudogene; putative ATP-binding component of a transport system; <NULL_VALUE> 1381902 ycjV 4306141 ycjV Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 1380821 D 511145 CDS NP_415835.1 16129280 945889 1381947..1382852 1 NC_000913.3 outer membrane protein; outer membrane porin G 1382852 ompG 945889 ompG Escherichia coli str. K-12 substr. MG1655 outer membrane porin G NP_415835.1 1381947 D 511145 CDS NP_415836.1 16129281 945875 complement(1382963..1383961) 1 NC_000913.3 putative LACI-type transcriptional regulator; LacI family putative transcriptional repressor 1383961 ycjW 945875 ycjW Escherichia coli str. K-12 substr. MG1655 LacI family putative transcriptional repressor NP_415836.1 1382963 R 511145 CDS NP_415837.1 16129282 945872 1384117..1385514 1 NC_000913.3 putative EC 2.1 enzymes; DUF463 family protein, putative P-loop NTPase 1385514 ycjX 945872 ycjX Escherichia coli str. K-12 substr. MG1655 DUF463 family protein, putative P-loop NTPase NP_415837.1 1384117 D 511145 CDS NP_415838.1 16129283 945878 1385511..1386572 1 NC_000913.3 UPF0283 family inner membrane protein 1386572 ycjF 945878 ycjF Escherichia coli str. K-12 substr. MG1655 UPF0283 family inner membrane protein NP_415838.1 1385511 D 511145 CDS NP_415839.1 16129284 945879 1386720..1388261 1 NC_000913.3 transcriptional regulation of aroF, aroG, tyrA and aromatic amino acid transport; aromatic amino acid biosynthesis and transport regulon transcriptional regulator; autorepressor; ATPase; phosphatase 1388261 tyrR 945879 tyrR Escherichia coli str. K-12 substr. MG1655 aromatic amino acid biosynthesis and transport regulon transcriptional regulator; autorepressor; ATPase; phosphatase NP_415839.1 1386720 D 511145 CDS NP_415840.1 16129285 945880 complement(1388305..1388811) 1 NC_000913.3 thiol peroxidase; lipid hydroperoxide peroxidase 1388811 tpx 945880 tpx Escherichia coli str. K-12 substr. MG1655 lipid hydroperoxide peroxidase NP_415840.1 1388305 R 511145 CDS NP_415841.4 90111249 946013 1388930..1389895 1 NC_000913.3 putative muconate cycloisomerase I; L-Ala-D/L-Glu epimerase 1389895 ycjG 946013 ycjG Escherichia coli str. K-12 substr. MG1655 L-Ala-D/L-Glu epimerase NP_415841.4 1388930 D 511145 CDS NP_415842.2 226524711 945969 complement(1389870..1390598) 1 NC_000913.3 putative carboxypeptidase; murein peptide amidase A 1390598 mpaA 945969 mpaA Escherichia coli str. K-12 substr. MG1655 murein peptide amidase A NP_415842.2 1389870 R 511145 CDS b4525 1450258 complement(1390725..1390862) 1 NC_000913.3 pseudogene; <NULL_VALUE> 1390862 ymjC 1450258 ymjC Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 1390725 R 511145 CDS b4673 7751617 complement(1390868..1390933) 1 NC_000913.3 pseudogene fragment, MhpC family; <NULL_VALUE> 1390933 ymjD 7751617 ymjD Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 1390868 R 511145 CDS NP_415843.2 221800781 945988 complement(1390933..1391853) 1 NC_000913.3 S9 homolog non-peptidase family protein 1391853 ycjY 945988 ycjY Escherichia coli str. K-12 substr. MG1655 S9 homolog non-peptidase family protein NP_415843.2 1390933 R 511145 CDS NP_415844.1 16129289 945930 1391991..1392890 1 NC_000913.3 putative transcriptional regulator LYSR-type; murein peptide degradation regulator 1392890 pgrR 945930 pgrR Escherichia coli str. K-12 substr. MG1655 murein peptide degradation regulator NP_415844.1 1391991 D 511145 CDS NP_415845.2 90111250 945951 1393227..1394840 1 NC_000913.3 periplasmic-binding component of ABC superfamily; murein tripeptide (L-ala-gamma-D-glutamyl-meso-DAP) transporter subunit 1394840 mppA 945951 mppA Escherichia coli str. K-12 substr. MG1655 murein tripeptide (L-ala-gamma-D-glutamyl-meso-DAP) transporter subunit NP_415845.2 1393227 D 511145 CDS NP_415846.1 16129291 945898 complement(1394891..1395922) 1 NC_000913.3 mechanosensitive channel protein, very small conductance 1395922 ynaI 945898 ynaI Escherichia coli str. K-12 substr. MG1655 mechanosensitive channel protein, very small conductance NP_415846.1 1394891 R 511145 CDS NP_415847.1 16129292 945896 1396076..1397092 1 NC_000913.3 IS5 transposase and trans-activator 1397092 insH1 945896 insH1 Escherichia coli str. K-12 substr. MG1655 IS5 transposase and trans-activator NP_415847.1 1396076 D 511145 CDS NP_415848.1 16129293 945901 1397365..1397622 1 NC_000913.3 DUF2534 family putative inner membrane protein 1397622 ynaJ 945901 ynaJ Escherichia coli str. K-12 substr. MG1655 DUF2534 family putative inner membrane protein NP_415848.1 1397365 D 511145 CDS NP_415849.1 16129294 945904 complement(1397672..1398622) 1 NC_000913.3 stress-induced protein 1398622 uspE 945904 uspE Escherichia coli str. K-12 substr. MG1655 stress-induced protein NP_415849.1 1397672 R 511145 CDS NP_415850.1 16129295 945908 complement(1398774..1399526) 1 NC_000913.3 transcriptional regulation of aerobic, anaerobic respiration, osmotic balance; oxygen-sensing anaerobic growth regulon transcriptional regulator; autorepressor 1399526 fnr 945908 fnr Escherichia coli str. K-12 substr. MG1655 oxygen-sensing anaerobic growth regulon transcriptional regulator; autorepressor NP_415850.1 1398774 R 511145 CDS NP_415851.1 16129296 945853 complement(1399721..1400236) 1 NC_000913.3 O-6-alkylguanine-DNA/cysteine-protein methyltransferase; O-6-alkylguanine-DNA:cysteine-protein methyltransferase 1400236 ogt 945853 ogt Escherichia coli str. K-12 substr. MG1655 O-6-alkylguanine-DNA:cysteine-protein methyltransferase NP_415851.1 1399721 R 511145 CDS NP_415852.2 90111251 945912 complement(1400247..1401773) 1 NC_000913.3 p-aminobenzoyl-glutamate transporter; membrane protein 1401773 abgT 945912 abgT Escherichia coli str. K-12 substr. MG1655 p-aminobenzoyl-glutamate transporter; membrane protein NP_415852.2 1400247 R 511145 CDS NP_415853.1 16129298 945950 complement(1401810..1403255) 1 NC_000913.3 p-aminobenzoyl-glutamate hydrolase, B subunit 1403255 abgB 945950 abgB Escherichia coli str. K-12 substr. MG1655 p-aminobenzoyl-glutamate hydrolase, B subunit NP_415853.1 1401810 R 511145 CDS NP_415854.4 90111252 945742 complement(1403255..1404565) 1 NC_000913.3 p-aminobenzoyl-glutamate hydrolase, A subunit 1404565 abgA 945742 abgA Escherichia coli str. K-12 substr. MG1655 p-aminobenzoyl-glutamate hydrolase, A subunit NP_415854.4 1403255 R 511145 CDS NP_415855.1 16129300 945831 1404741..1405649 1 NC_000913.3 putative transcriptional regulator LYSR-type; putative DNA-binding transcriptional regulator of abgABT operon 1405649 abgR 945831 abgR Escherichia coli str. K-12 substr. MG1655 putative DNA-binding transcriptional regulator of abgABT operon NP_415855.1 1404741 D 511145 CDS NP_415856.1 16129301 945953 1405979..1406542 1 NC_000913.3 DNA endonuclease 1406542 smrA 945953 smrA Escherichia coli str. K-12 substr. MG1655 DNA endonuclease NP_415856.1 1405979 D 511145 CDS NP_415857.2 90111253 945909 complement(1406563..1407795) 1 NC_000913.3 diguanylate cyclase, csgD regulator 1407795 ydaM 945909 ydaM Escherichia coli str. K-12 substr. MG1655 diguanylate cyclase, csgD regulator NP_415857.2 1406563 R 511145 CDS NP_415858.1 16129303 945910 1408050..1409033 1 NC_000913.3 putative Zn(II) transporter 1409033 ydaN 945910 ydaN Escherichia coli str. K-12 substr. MG1655 putative Zn(II) transporter NP_415858.1 1408050 D 511145 CDS NP_415859.1 16129304 947153 1409511..1410884 1 NC_000913.3 ATP-dependent RNA helicase; ATP-dependent RNA helicase, specific for 23S rRNA 1410884 dbpA 947153 dbpA Escherichia coli str. K-12 substr. MG1655 ATP-dependent RNA helicase, specific for 23S rRNA NP_415859.1 1409511 D 511145 CDS NP_415860.1 16129305 948967 complement(1411013..1411948) 1 NC_000913.3 tRNA 2-thiocytidine biosynthesis protein 1411948 ttcA 948967 ttcA Escherichia coli str. K-12 substr. MG1655 tRNA 2-thiocytidine biosynthesis protein NP_415860.1 1411013 R 511145 CDS NP_415861.1 16129306 946976 complement(1412000..1413235) 1 NC_000913.3 Rac prophage; integrase 1413235 intR 946976 intR Escherichia coli str. K-12 substr. MG1655 Rac prophage; integrase NP_415861.1 1412000 R 511145 CDS NP_415862.4 90111254 947399 complement(1413237..1413452) 1 NC_000913.3 putative lambdoid prophage Rac excisionase; Rac prophage; conserved protein 1413452 ydaQ 947399 ydaQ Escherichia coli str. K-12 substr. MG1655 Rac prophage; conserved protein NP_415862.4 1413237 R 511145 CDS NP_415863.1 16129308 947504 complement(1413531..1413740) 1 NC_000913.3 double-strand break reduction protein, Rac prophage 1413740 rcbA 947504 rcbA Escherichia coli str. K-12 substr. MG1655 double-strand break reduction protein, Rac prophage NP_415863.1 1413531 R 511145 CDS NP_415864.1 16129309 945914 complement(1413733..1413927) 1 NC_000913.3 restriction alleviation and modification enhancement; Rac prophage; restriction alleviation protein 1413927 ralR 945914 ralR Escherichia coli str. K-12 substr. MG1655 Rac prophage; restriction alleviation protein NP_415864.1 1413733 R 511145 CDS NP_415865.1 16129310 945917 complement(1413984..1414793) 1 NC_000913.3 recombinase, DNA renaturation; Rac prophage; recombination and repair protein 1414793 recT 945917 recT Escherichia coli str. K-12 substr. MG1655 Rac prophage; recombination and repair protein NP_415865.1 1413984 R 511145 CDS NP_415866.1 16129311 945918 complement(1414786..1417386) 1 NC_000913.3 exonuclease VIII, ds DNA exonuclease, 5' --> 3' specific; Rac prophage; exonuclease VIII, 5' -> 3' specific dsDNA exonuclease 1417386 recE 945918 recE Escherichia coli str. K-12 substr. MG1655 Rac prophage; exonuclease VIII, 5' -> 3' specific dsDNA exonuclease NP_415866.1 1414786 R 511145 CDS NP_415867.1 16129312 945920 complement(1417488..1417763) 1 NC_000913.3 RacC protein; Rac prophage; uncharacterized protein 1417763 racC 945920 racC Escherichia coli str. K-12 substr. MG1655 Rac prophage; uncharacterized protein NP_415867.1 1417488 R 511145 CDS YP_588451.1 94541109 948959 complement(1417838..1418008) 1 NC_000913.3 Rac prophage; conserved protein 1418008 ydaE 948959 ydaE Escherichia coli str. K-12 substr. MG1655 Rac prophage; conserved protein YP_588451.1 1417838 R 511145 CDS NP_415869.2 90111255 945921 complement(1418008..1418229) 1 NC_000913.3 Kil protein (killing function) of lambdoid prophage Rac; Rac prophage; inhibitor of ftsZ, killing protein 1418229 kilR 945921 kilR Escherichia coli str. K-12 substr. MG1655 Rac prophage; inhibitor of ftsZ, killing protein NP_415869.2 1418008 R 511145 CDS NP_415870.4 90111256 945913 1418671..1419159 1 NC_000913.3 phage superinfection exclusion protein; Rac prophage; phage superinfection exclusion protein 1419159 sieB 945913 sieB Escherichia coli str. K-12 substr. MG1655 Rac prophage; phage superinfection exclusion protein NP_415870.4 1418671 D 511145 CDS NP_415872.2 94541091 945911 complement(1419156..1419311) 1 NC_000913.3 Rac prophage; uncharacterized protein 1419311 ydaF 945911 ydaF Escherichia coli str. K-12 substr. MG1655 Rac prophage; uncharacterized protein NP_415872.2 1419156 R 511145 CDS NP_415873.2 90111257 945907 complement(1419322..1419456) 1 NC_000913.3 Rac prophage; uncharacterized protein 1419456 ydaG 945907 ydaG Escherichia coli str. K-12 substr. MG1655 Rac prophage; uncharacterized protein NP_415873.2 1419322 R 511145 CDS NP_415874.1 16129317 945899 complement(1419765..1420241) 1 NC_000913.3 Rac prophage; putative DNA-binding transcriptional regulator 1420241 racR 945899 racR Escherichia coli str. K-12 substr. MG1655 Rac prophage; putative DNA-binding transcriptional regulator NP_415874.1 1419765 R 511145 CDS NP_415875.1 16129318 945923 1420365..1420661 1 NC_000913.3 Rac prophage; putative DNA-binding transcriptional regulator 1420661 ydaS 945923 ydaS Escherichia coli str. K-12 substr. MG1655 Rac prophage; putative DNA-binding transcriptional regulator NP_415875.1 1420365 D 511145 CDS NP_415876.1 16129319 945924 1420684..1421106 1 NC_000913.3 Rac prophage; uncharacterized protein 1421106 ydaT 945924 ydaT Escherichia coli str. K-12 substr. MG1655 Rac prophage; uncharacterized protein NP_415876.1 1420684 D 511145 CDS NP_415877.1 16129320 945925 1421119..1421976 1 NC_000913.3 Rac prophage; conserved protein 1421976 ydaU 945925 ydaU Escherichia coli str. K-12 substr. MG1655 Rac prophage; conserved protein NP_415877.1 1421119 D 511145 CDS NP_415878.1 16129321 945926 1421983..1422729 1 NC_000913.3 putative DNA replication factor; Rac prophage; putative DNA replication protein 1422729 ydaV 945926 ydaV Escherichia coli str. K-12 substr. MG1655 Rac prophage; putative DNA replication protein NP_415878.1 1421983 D 511145 CDS b1361 945927 1422701..1423200 1 NC_000913.3 Rac prophage; pseudogene, DNA-binding protein family;Phage or Prophage Related; <NULL_VALUE> 1423200 ydaW 945927 ydaW Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 1422701 D 511145 CDS b1362 945928 1423201..1423644 1 NC_000913.3 pseudogene, Rac prophage; Bacteriophage Rz lysis protein family;Phage or Prophage Related; putative Rac prophage endopeptidase; completely contained in another CDS; <NULL_VALUE> 1423644 rzpR 945928 rzpR Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 1423201 D 511145 CDS YP_588452.1 94541110 1450262 1423400..1423585 1 NC_000913.3 completely contained in another CDS; Rac prophage; putative lipoprotein 1423585 rzoR 1450262 rzoR Escherichia coli str. K-12 substr. MG1655 Rac prophage; putative lipoprotein YP_588452.1 1423400 D 511145 CDS NP_415881.1 16129324 945932 1423782..1425239 1 NC_000913.3 Rac prophage; potassium transporter subunit 1425239 trkG 945932 trkG Escherichia coli str. K-12 substr. MG1655 Rac prophage; potassium transporter subunit NP_415881.1 1423782 D 511145 CDS NP_415883.1 16129326 947417 1425377..1425640 1 NC_000913.3 Rac prophage; conserved protein 1425640 ynaK 947417 ynaK Escherichia coli str. K-12 substr. MG1655 Rac prophage; conserved protein NP_415883.1 1425377 D 511145 CDS b1366 946208 1425630..1426082 1 NC_000913.3 pseudogene, Rac prophage;Phage or Prophage Related; <NULL_VALUE> 1426082 ydaY 946208 ydaY Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 1425630 D 511145 CDS b1368 947543 1426454..1427386 1 NC_000913.3 Rac prophage; pseudogene, tail protein family;Phage or Prophage Related; putative alpha helix protein; <NULL_VALUE> 1427386 tmpR 947543 tmpR Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 1426454 D 511145 CDS b4570 4056036 join(1427389..1427598,1428795..1428984) 1 NC_000913.3 pseudogene, Rac prophage lom homolog;Phage or Prophage Related; interrupted by IS5 and N-ter deletion; <NULL_VALUE> 1428984 lomR 4056036 lomR Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 1427389 D 511145 CDS b1370 945944 complement(1427746..1428726) 1 NC_000913.3 IS5 transposase and trans-activator;IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related; <NULL_VALUE> 1428726 insH1 945944 insH1 Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 1427746 R 511145 CDS NP_415890.2 90111261 945207 1429049..1432411 1 NC_000913.3 Rac prophage; putative tail fiber protein 1432411 stfR 945207 stfR Escherichia coli str. K-12 substr. MG1655 Rac prophage; putative tail fiber protein NP_415890.2 1429049 D 511145 CDS NP_415891.1 16129334 946062 1432411..1432986 1 NC_000913.3 tail fiber assembly protein homolog from lambdoid prophage Rac; Rac prophage; putative tail fiber assembly protein 1432986 tfaR 946062 tfaR Escherichia coli str. K-12 substr. MG1655 Rac prophage; putative tail fiber assembly protein NP_415891.1 1432411 D 511145 CDS NP_415892.1 16129335 948973 complement(1433084..1433674) 1 NC_000913.3 Rac prophage; putative site-specific recombinase 1433674 pinR 948973 pinR Escherichia coli str. K-12 substr. MG1655 Rac prophage; putative site-specific recombinase NP_415892.1 1433084 R 511145 CDS NP_415893.2 345452718 946078 complement(1433991..1434224) 1 NC_000913.3 cold shock protein, Rac prophage 1434224 ynaE 946078 ynaE Escherichia coli str. K-12 substr. MG1655 cold shock protein, Rac prophage NP_415893.2 1433991 R 511145 CDS b4638 5625564 complement(1434958..1435008) 1 NC_000913.3 pseudogene, prophage Rac integration site ttcA duplication;Phage or Prophage Related; <NULL_VALUE> 1435008 ttcC 5625564 ttcC Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 1434958 R 511145 CDS NP_415894.4 90111262 945948 complement(1435185..1435619) 1 NC_000913.3 putative filament protein; stress-induced protein, ATP-binding protein 1435619 uspF 945948 uspF Escherichia coli str. K-12 substr. MG1655 stress-induced protein, ATP-binding protein NP_415894.4 1435185 R 511145 CDS NP_415895.1 16129338 946313 complement(1435760..1436893) 1 NC_000913.3 outer membrane pore protein N, non-specific 1436893 ompN 946313 ompN Escherichia coli str. K-12 substr. MG1655 outer membrane pore protein N, non-specific NP_415895.1 1435760 R 511145 CDS NP_415896.1 16129339 946587 complement(1437260..1440784) 1 NC_000913.3 putative oxidoreductase, Fe-S subunit; pyruvate-flavodoxin oxidoreductase 1440784 pfo 946587 pfo Escherichia coli str. K-12 substr. MG1655 pyruvate-flavodoxin oxidoreductase NP_415896.1 1437260 R 511145 CDS YP_588453.1 94541111 4056027 1441058..1441324 1 NC_000913.3 DUF333 family putative lipoprotein 1441324 ydbJ 4056027 ydbJ Escherichia coli str. K-12 substr. MG1655 DUF333 family putative lipoprotein YP_588453.1 1441058 D 511145 CDS NP_415897.1 16129340 946525 complement(1441321..1441743) 1 NC_000913.3 heat shock protein hslJ; heat-inducible lipoprotein involved in novobiocin resistance 1441743 hslJ 946525 hslJ Escherichia coli str. K-12 substr. MG1655 heat-inducible lipoprotein involved in novobiocin resistance NP_415897.1 1441321 R 511145 CDS NP_415898.1 16129341 946315 complement(1441854..1442843) 1 NC_000913.3 fermentative D-lactate dehydrogenase, NAD-dependent 1442843 ldhA 946315 ldhA Escherichia coli str. K-12 substr. MG1655 fermentative D-lactate dehydrogenase, NAD-dependent NP_415898.1 1441854 R 511145 CDS NP_415899.1 16129342 945949 1443051..1445690 1 NC_000913.3 putative membrane-anchored protein, function unknown 1445690 ydbH 945949 ydbH Escherichia coli str. K-12 substr. MG1655 putative membrane-anchored protein, function unknown NP_415899.1 1443051 D 511145 CDS NP_415900.1 16129343 945946 1445687..1445872 1 NC_000913.3 lipoprotein 1445872 ynbE 945946 ynbE Escherichia coli str. K-12 substr. MG1655 lipoprotein NP_415900.1 1445687 D 511145 CDS NP_415901.2 90111263 945943 1445880..1446206 1 NC_000913.3 DUF1318 family protein 1446206 ydbL 945943 ydbL Escherichia coli str. K-12 substr. MG1655 DUF1318 family protein NP_415901.2 1445880 D 511145 CDS NP_415902.1 16129345 945941 complement(1446378..1447283) 1 NC_000913.3 regulatory protein for 2-phenylethylamine catabolism; transcriptional activator for tynA and feaB 1447283 feaR 945941 feaR Escherichia coli str. K-12 substr. MG1655 transcriptional activator for tynA and feaB NP_415902.1 1446378 R 511145 CDS NP_415903.4 90111264 945933 1447519..1449018 1 NC_000913.3 phenylacetaldehyde dehydrogenase 1449018 feaB 945933 feaB Escherichia coli str. K-12 substr. MG1655 phenylacetaldehyde dehydrogenase NP_415903.4 1447519 D 511145 CDS NP_415904.3 162135920 945939 complement(1449076..1451349) 1 NC_000913.3 copper amine oxidase (tyramine oxidase); tyramine oxidase, copper-requiring 1451349 tynA 945939 tynA Escherichia coli str. K-12 substr. MG1655 tyramine oxidase, copper-requiring NP_415904.3 1449076 R 511145 CDS NP_415905.1 16129348 945954 complement(1451597..1453642) 1 NC_000913.3 fused oxepin-CoA hydrolase/3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase 1453642 paaZ 945954 paaZ Escherichia coli str. K-12 substr. MG1655 fused oxepin-CoA hydrolase/3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase NP_415905.1 1451597 R 511145 CDS NP_415906.1 16129349 945833 1453927..1454856 1 NC_000913.3 ring 1,2-phenylacetyl-CoA epoxidase subunit 1454856 paaA 945833 paaA Escherichia coli str. K-12 substr. MG1655 ring 1,2-phenylacetyl-CoA epoxidase subunit NP_415906.1 1453927 D 511145 CDS NP_415907.1 16129350 947595 1454868..1455155 1 NC_000913.3 putative ring 1,2-phenylacetyl-CoA epoxidase subunit 1455155 paaB 947595 paaB Escherichia coli str. K-12 substr. MG1655 putative ring 1,2-phenylacetyl-CoA epoxidase subunit NP_415907.1 1454868 D 511145 CDS NP_415908.1 16129351 945956 1455164..1455910 1 NC_000913.3 ring 1,2-phenylacetyl-CoA epoxidase subunit 1455910 paaC 945956 paaC Escherichia coli str. K-12 substr. MG1655 ring 1,2-phenylacetyl-CoA epoxidase subunit NP_415908.1 1455164 D 511145 CDS NP_415909.4 226524712 945959 1455925..1456422 1 NC_000913.3 ring 1,2-phenylacetyl-CoA epoxidase subunit 1456422 paaD 945959 paaD Escherichia coli str. K-12 substr. MG1655 ring 1,2-phenylacetyl-CoA epoxidase subunit NP_415909.4 1455925 D 511145 CDS NP_415910.1 16129353 945962 1456430..1457500 1 NC_000913.3 ring 1,2-phenylacetyl-CoA epoxidase, NAD(P)H oxidoreductase component 1457500 paaE 945962 paaE Escherichia coli str. K-12 substr. MG1655 ring 1,2-phenylacetyl-CoA epoxidase, NAD(P)H oxidoreductase component NP_415910.1 1456430 D 511145 CDS NP_415911.1 16129354 946011 1457497..1458264 1 NC_000913.3 2,3-dehydroadipyl-CoA hydratase 1458264 paaF 946011 paaF Escherichia coli str. K-12 substr. MG1655 2,3-dehydroadipyl-CoA hydratase NP_415911.1 1457497 D 511145 CDS NP_415912.1 16129355 946263 1458264..1459052 1 NC_000913.3 1,2-epoxyphenylacetyl-CoA isomerase, oxepin-CoA-forming 1459052 paaG 946263 paaG Escherichia coli str. K-12 substr. MG1655 1,2-epoxyphenylacetyl-CoA isomerase, oxepin-CoA-forming NP_415912.1 1458264 D 511145 CDS NP_415913.1 16129356 945940 1459054..1460481 1 NC_000913.3 3-hydroxyadipyl-CoA dehydrogenase, NAD+-dependent 1460481 paaH 945940 paaH Escherichia coli str. K-12 substr. MG1655 3-hydroxyadipyl-CoA dehydrogenase, NAD+-dependent NP_415913.1 1459054 D 511145 CDS NP_415914.1 16129357 945265 1460471..1460893 1 NC_000913.3 hydroxyphenylacetyl-CoA thioesterase 1460893 paaI 945265 paaI Escherichia coli str. K-12 substr. MG1655 hydroxyphenylacetyl-CoA thioesterase NP_415914.1 1460471 D 511145 CDS NP_415915.1 16129358 946121 1460893..1462098 1 NC_000913.3 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase 1462098 paaJ 946121 paaJ Escherichia coli str. K-12 substr. MG1655 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase NP_415915.1 1460893 D 511145 CDS NP_415916.1 16129359 945963 1462125..1463438 1 NC_000913.3 phenylacetyl-CoA ligase 1463438 paaK 945963 paaK Escherichia coli str. K-12 substr. MG1655 phenylacetyl-CoA ligase NP_415916.1 1462125 D 511145 CDS NP_415917.1 16129360 945966 1463539..1464489 1 NC_000913.3 transcriptional repressor of phenylacetic acid degradation paa operon, phenylacetyl-CoA inducer 1464489 paaX 945966 paaX Escherichia coli str. K-12 substr. MG1655 transcriptional repressor of phenylacetic acid degradation paa operon, phenylacetyl-CoA inducer NP_415917.1 1463539 D 511145 CDS NP_415918.1 16129361 945965 1464471..1465061 1 NC_000913.3 putative hexapeptide repeat acetyltransferase 1465061 paaY 945965 paaY Escherichia coli str. K-12 substr. MG1655 putative hexapeptide repeat acetyltransferase NP_415918.1 1464471 D 511145 CDS YP_002791240.1 226524713 7751614 complement(1465165..1465230) 1 NC_000913.3 uncharacterized protein 1465230 ynbG 7751614 ynbG Escherichia coli str. K-12 substr. MG1655 uncharacterized protein YP_002791240.1 1465165 R 511145 CDS b4492 2847750 join(1465392..1467904,1469241..1469293,1470517..1474013) 1 NC_000913.3 pseudogene, autotransporter homolog; interrupted by IS2 and IS30; <NULL_VALUE> 1474013 ydbA 2847750 ydbA Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 1465392 D 511145 CDS NP_415920.1 16129363 945952 complement(1467921..1468826) 1 NC_000913.3 IS2 transposase TnpB 1468826 insD1 945952 insD1 Escherichia coli str. K-12 substr. MG1655 IS2 transposase TnpB NP_415920.1 1467921 R 511145 CDS NP_415921.2 145698254 945967 complement(1468784..1469149) 1 NC_000913.3 IS2 repressor TnpA 1469149 insC1 945967 insC1 Escherichia coli str. K-12 substr. MG1655 IS2 repressor TnpA NP_415921.2 1468784 R 511145 CDS NP_415922.1 16129365 945968 1469358..1470509 1 NC_000913.3 IS30 transposase 1470509 insI1 945968 insI1 Escherichia coli str. K-12 substr. MG1655 IS30 transposase NP_415922.1 1469358 D 511145 CDS NP_415924.1 16129367 945980 1474221..1475081 1 NC_000913.3 putative dehydrogenase; putative NAD(P)-binding oxidoreductase 1475081 ydbC 945980 ydbC Escherichia coli str. K-12 substr. MG1655 putative NAD(P)-binding oxidoreductase NP_415924.1 1474221 D 511145 CDS NP_415925.2 90111266 945983 1475144..1477450 1 NC_000913.3 PF10971 family putative periplasmic methylglyoxal resistance protein 1477450 ydbD 945983 ydbD Escherichia coli str. K-12 substr. MG1655 PF10971 family putative periplasmic methylglyoxal resistance protein NP_415925.2 1475144 D 511145 CDS NP_415926.4 90111267 945973 1477621..1478226 1 NC_000913.3 inner membrane protein 1478226 ynbA 945973 ynbA Escherichia coli str. K-12 substr. MG1655 inner membrane protein NP_415926.4 1477621 D 511145 CDS NP_415927.1 16129370 945972 1478226..1479122 1 NC_000913.3 putative phosphatidate cytidiltransferase; putative CDP-diglyceride synthase 1479122 ynbB 945972 ynbB Escherichia coli str. K-12 substr. MG1655 putative CDP-diglyceride synthase NP_415927.1 1478226 D 511145 CDS NP_415928.1 16129371 945970 1479138..1480895 1 NC_000913.3 putative esterase 1480895 ynbC 945970 ynbC Escherichia coli str. K-12 substr. MG1655 putative esterase NP_415928.1 1479138 D 511145 CDS NP_415929.1 16129372 945985 1480909..1482201 1 NC_000913.3 putative enzymes; putative phosphatase inner membrane protein 1482201 ynbD 945985 ynbD Escherichia coli str. K-12 substr. MG1655 putative phosphatase inner membrane protein NP_415929.1 1480909 D 511145 CDS NP_415930.1 16129373 947569 complement(1482255..1482860) 1 NC_000913.3 acyl carrier protein phosphodiesterase; NADH-azoreductase, FMN-dependent 1482860 azoR 947569 azoR Escherichia coli str. K-12 substr. MG1655 NADH-azoreductase, FMN-dependent NP_415930.1 1482255 R 511145 CDS NP_415931.4 145698255 948444 1483061..1486963 1 NC_000913.3 helicase, ATP-dependent; putative ATP-dependent helicase 1486963 hrpA 948444 hrpA Escherichia coli str. K-12 substr. MG1655 putative ATP-dependent helicase NP_415931.4 1483061 D 511145 CDS NP_415932.1 16129375 946215 1487235..1488035 1 NC_000913.3 DUF218 superfamily protein, SAM-binding 1488035 ydcF 946215 ydcF Escherichia coli str. K-12 substr. MG1655 DUF218 superfamily protein, SAM-binding NP_415932.1 1487235 D 511145 CDS NP_415933.1 16129376 945672 1488232..1489671 1 NC_000913.3 aldehyde dehydrogenase, NAD-linked; aldehyde dehydrogenase A, NAD-linked 1489671 aldA 945672 aldA Escherichia coli str. K-12 substr. MG1655 aldehyde dehydrogenase A, NAD-linked NP_415933.1 1488232 D 511145 CDS b4493 2847738 complement(join(1489713..1489964,1489964..1490713)) 1 NC_000913.3 pseudogene, GAP dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase (second fragment); <NULL_VALUE> 1490713 gapC 2847738 gapC Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 1489713 R 511145 CDS NP_415935.2 90111268 947241 1490902..1491432 1 NC_000913.3 cytochrome b561 1491432 cybB 947241 cybB Escherichia coli str. K-12 substr. MG1655 cytochrome b561 NP_415935.2 1490902 D 511145 CDS NP_415936.1 16129378 945986 1491677..1491850 1 NC_000913.3 putative periplasmic protein 1491850 ydcA 945986 ydcA Escherichia coli str. K-12 substr. MG1655 putative periplasmic protein NP_415936.1 1491677 D 511145 CDS YP_025301.1 49176107 2847727 complement(1491922..1492071) 1 NC_000913.3 small toxic membrane polypeptide; toxic polypeptide, small 1492071 hokB 2847727 hokB Escherichia coli str. K-12 substr. MG1655 toxic polypeptide, small YP_025301.1 1491922 R 511145 CDS NP_415937.1 16129379 948820 complement(1491962..1492129) 1 NC_000913.3 regulatory peptide whose translation enables hokB expression; regulatory peptide 1492129 mokB 948820 mokB Escherichia coli str. K-12 substr. MG1655 regulatory peptide NP_415937.1 1491962 R 511145 CDS NP_415938.1 16129380 945995 1492470..1494110 1 NC_000913.3 methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor 1494110 trg 945995 trg Escherichia coli str. K-12 substr. MG1655 methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor NP_415938.1 1492470 D 511145 CDS NP_415939.2 90111269 948865 complement(1494148..1495071) 1 NC_000913.3 putative transcriptional regulator LYSR-type; putative DNA-binding transcriptional regulator 1495071 ydcI 948865 ydcI Escherichia coli str. K-12 substr. MG1655 putative DNA-binding transcriptional regulator NP_415939.2 1494148 R 511145 CDS NP_415940.1 16129382 945991 1495288..1496631 1 NC_000913.3 putative metalloenzyme 1496631 ydcJ 945991 ydcJ Escherichia coli str. K-12 substr. MG1655 putative metalloenzyme NP_415940.1 1495288 D 511145 CDS NP_415941.5 145698256 945994 1496856..1498511 1 NC_000913.3 putative glycoprotein; osmoregulated periplasmic glucan (OPG) biosynthesis periplasmic protein 1498511 opgD 945994 opgD Escherichia coli str. K-12 substr. MG1655 osmoregulated periplasmic glucan (OPG) biosynthesis periplasmic protein NP_415941.5 1496856 D 511145 CDS NP_415943.4 90111271 945997 1498651..1498875 1 NC_000913.3 DUF465 family protein 1498875 ydcH 945997 ydcH Escherichia coli str. K-12 substr. MG1655 DUF465 family protein NP_415943.4 1498651 D 511145 CDS NP_415944.1 16129386 945998 1498938..1499477 1 NC_000913.3 ribosomal-protein-serine acetyltransferase; ribosomal-protein-L7/L12-serine acetyltransferase 1499477 rimL 945998 rimL Escherichia coli str. K-12 substr. MG1655 ribosomal-protein-L7/L12-serine acetyltransferase NP_415944.1 1498938 D 511145 CDS NP_415945.1 16129387 944932 complement(1499469..1500449) 1 NC_000913.3 uncharacterized protein 1500449 ydcK 944932 ydcK Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_415945.1 1499469 R 511145 CDS NP_415946.1 16129388 945852 1500573..1501565 1 NC_000913.3 potassium-tellurite ethidium and proflavin transporter 1501565 tehA 945852 tehA Escherichia coli str. K-12 substr. MG1655 potassium-tellurite ethidium and proflavin transporter NP_415946.1 1500573 D 511145 CDS NP_415947.1 16129389 945979 1501562..1502155 1 NC_000913.3 tellurite, selenium methyltransferase, SAM-dependent; tellurite, selenium resistance protein 1502155 tehB 945979 tehB Escherichia coli str. K-12 substr. MG1655 tellurite, selenium methyltransferase, SAM-dependent; tellurite, selenium resistance protein NP_415947.1 1501562 D 511145 CDS NP_415948.1 16129390 948203 1502457..1503125 1 NC_000913.3 lipoprotein 1503125 ydcL 948203 ydcL Escherichia coli str. K-12 substr. MG1655 lipoprotein NP_415948.1 1502457 D 511145 CDS b4578 4056028 complement(1503218..1503649) 1 NC_000913.3 pseudogene, IS609 transposase A;IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related; <NULL_VALUE> 1503649 insP 4056028 insP Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 1503218 R 511145 CDS NP_415949.2 288551665 944942 1503717..1504865 1 NC_000913.3 IS609 transposase B 1504865 insQ 944942 insQ Escherichia coli str. K-12 substr. MG1655 IS609 transposase B NP_415949.2 1503717 D 511145 CDS NP_415950.4 90111272 947247 complement(1504905..1506080) 1 NC_000913.3 putative membrane transport protein; BenE family inner membrane putative transporter 1506080 ydcO 947247 ydcO Escherichia coli str. K-12 substr. MG1655 BenE family inner membrane putative transporter NP_415950.4 1504905 R 511145 CDS NP_415951.1 16129393 946000 1506172..1506708 1 NC_000913.3 putative DNA-binding transcriptional regulator 1506708 ydcN 946000 ydcN Escherichia coli str. K-12 substr. MG1655 putative DNA-binding transcriptional regulator NP_415951.1 1506172 D 511145 CDS NP_415952.2 90111273 945993 1506781..1508742 1 NC_000913.3 putative protease; putative peptidase 1508742 ydcP 945993 ydcP Escherichia coli str. K-12 substr. MG1655 putative peptidase NP_415952.2 1506781 D 511145 CDS NP_415953.1 16129395 945990 complement(1508834..1509064) 1 NC_000913.3 uncharacterized protein 1509064 yncJ 945990 yncJ Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_415953.1 1508834 R 511145 CDS NP_415954.2 94541092 945989 1509286..1509462 1 NC_000913.3 mRNA interferase toxin of the HicAB toxin-antitoxin system 1509462 hicA 945989 hicA Escherichia coli str. K-12 substr. MG1655 mRNA interferase toxin of the HicAB toxin-antitoxin system NP_415954.2 1509286 D 511145 CDS NP_415955.2 145698257 946001 1509508..1509924 1 NC_000913.3 antitoxin for the HicAB toxin-antitoxin system 1509924 hicB 946001 hicB Escherichia coli str. K-12 substr. MG1655 antitoxin for the HicAB toxin-antitoxin system NP_415955.2 1509508 D 511145 CDS NP_415956.1 16129398 946004 1510003..1511409 1 NC_000913.3 multi modular; putative transcriptional regulator; also putative ATP-binding component of a transport system; putative DNA-binding transcriptional regulator/putative amino transferase 1511409 ydcR 946004 ydcR Escherichia coli str. K-12 substr. MG1655 putative DNA-binding transcriptional regulator/putative amino transferase NP_415956.1 1510003 D 511145 CDS NP_415957.1 16129399 946005 1511654..1512799 1 NC_000913.3 periplasmic-binding component of ABC superfamily; polyhydroxybutyrate (PHB) synthase, ABC transporter periplasmic binding protein homolog 1512799 ydcS 946005 ydcS Escherichia coli str. K-12 substr. MG1655 polyhydroxybutyrate (PHB) synthase, ABC transporter periplasmic binding protein homolog NP_415957.1 1511654 D 511145 CDS NP_415958.1 16129400 946007 1512817..1513830 1 NC_000913.3 ATP-binding component of ABC superfamily; putative spermidine/putrescine transporter subunit 1513830 ydcT 946007 ydcT Escherichia coli str. K-12 substr. MG1655 putative spermidine/putrescine transporter subunit NP_415958.1 1512817 D 511145 CDS NP_415959.1 16129401 945976 1513831..1514772 1 NC_000913.3 membrane component of ABC superfamily; putative spermidine/putrescine transporter subunit 1514772 ydcU 945976 ydcU Escherichia coli str. K-12 substr. MG1655 putative spermidine/putrescine transporter subunit NP_415959.1 1513831 D 511145 CDS NP_415960.1 16129402 945903 1514762..1515556 1 NC_000913.3 membrane component of ABC superfamily; putative spermidine/putrescine transporter subunit 1515556 ydcV 945903 ydcV Escherichia coli str. K-12 substr. MG1655 putative spermidine/putrescine transporter subunit NP_415960.1 1514762 D 511145 CDS NP_415961.1 16129403 945876 1515578..1517002 1 NC_000913.3 putative aldehyde dehydrogenase; gamma-aminobutyraldehyde dehydrogenase 1517002 patD 945876 patD Escherichia coli str. K-12 substr. MG1655 gamma-aminobutyraldehyde dehydrogenase NP_415961.1 1515578 D 511145 CDS YP_001165318.1 145698258 5061503 complement(1517099..1517194) 1 NC_000913.3 stress-induced small inner membrane enterobacterial protein 1517194 yncL 5061503 yncL Escherichia coli str. K-12 substr. MG1655 stress-induced small inner membrane enterobacterial protein YP_001165318.1 1517099 R 511145 CDS NP_415962.2 90111274 945936 1517389..1517562 1 NC_000913.3 DUF2566 family protein 1517562 ydcX 945936 ydcX Escherichia coli str. K-12 substr. MG1655 DUF2566 family protein NP_415962.2 1517389 D 511145 CDS NP_415963.1 16129405 945916 1517648..1517881 1 NC_000913.3 uncharacterized protein 1517881 ydcY 945916 ydcY Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_415963.1 1517648 D 511145 CDS NP_415964.1 16129406 946008 complement(1517882..1518331) 1 NC_000913.3 DUF606 family inner membrane protein 1518331 ydcZ 946008 ydcZ Escherichia coli str. K-12 substr. MG1655 DUF606 family inner membrane protein NP_415964.1 1517882 R 511145 CDS NP_415965.1 16129407 946010 complement(1518328..1518846) 1 NC_000913.3 methionine N-acyltransferase; L-amino acid N-acyltransferase 1518846 mnaT 946010 mnaT Escherichia coli str. K-12 substr. MG1655 methionine N-acyltransferase; L-amino acid N-acyltransferase NP_415965.1 1518328 R 511145 CDS NP_415966.6 226524714 946012 1519027..1520064 1 NC_000913.3 putative oxidoreductase; curcumin/dihydrocurcumin reductase, NADPH-dependent 1520064 curA 946012 curA Escherichia coli str. K-12 substr. MG1655 curcumin/dihydrocurcumin reductase, NADPH-dependent NP_415966.6 1519027 D 511145 CDS NP_415967.2 90111276 946014 1520262..1520927 1 NC_000913.3 colanic acid and biofilm gene transcriptional regulator, MqsR-controlled 1520927 mcbR 946014 mcbR Escherichia coli str. K-12 substr. MG1655 colanic acid and biofilm gene transcriptional regulator, MqsR-controlled NP_415967.2 1520262 D 511145 CDS NP_415968.1 16129410 946015 complement(1520963..1523065) 1 NC_000913.3 putative iron outer membrane transporter 1523065 yncD 946015 yncD Escherichia coli str. K-12 substr. MG1655 putative iron outer membrane transporter NP_415968.1 1520963 R 511145 CDS NP_415969.1 16129411 946006 1523307..1524368 1 NC_000913.3 putative receptor; ATP-binding protein, periplasmic, function unknown 1524368 yncE 946006 yncE Escherichia coli str. K-12 substr. MG1655 ATP-binding protein, periplasmic, function unknown NP_415969.1 1523307 D 511145 CDS NP_415970.4 90111277 946019 complement(1524481..1525980) 1 NC_000913.3 L-asparagine permease; L-asparagine transporter 1525980 ansP 946019 ansP Escherichia coli str. K-12 substr. MG1655 L-asparagine transporter NP_415970.4 1524481 R 511145 CDS NP_415971.1 16129413 946023 1526247..1526864 1 NC_000913.3 glutathione S-transferase homolog 1526864 yncG 946023 yncG Escherichia coli str. K-12 substr. MG1655 glutathione S-transferase homolog NP_415971.1 1526247 D 511145 CDS NP_415972.1 16129414 946024 1526940..1527152 1 NC_000913.3 IPR020099 family protein 1527152 yncH 946024 yncH Escherichia coli str. K-12 substr. MG1655 IPR020099 family protein NP_415972.1 1526940 D 511145 CDS b1456 946026 1527902..1529938 1 NC_000913.3 pseudogene, Rhs family protein; <NULL_VALUE> 1529938 rhsE 946026 rhsE Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 1527902 D 511145 CDS NP_415974.1 16129416 946958 1529922..1530404 1 NC_000913.3 uncharacterized protein 1530404 ydcD 946958 ydcD Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_415974.1 1529922 D 511145 CDS b1459 945121 join(1530586..1531323,1531325..1531639) 1 NC_000913.3 pseudogene; <NULL_VALUE> 1531639 yncI 945121 yncI Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 1530586 D 511145 CDS NP_415977.1 16129419 947435 1531816..1532952 1 NC_000913.3 H repeat-associated protein (ORF-H); H repeat-associated putative transposase 1532952 ydcC 947435 ydcC Escherichia coli str. K-12 substr. MG1655 H repeat-associated putative transposase NP_415977.1 1531816 D 511145 CDS NP_415978.1 16129420 945731 1533052..1533285 1 NC_000913.3 4-oxalocrotonate tautomerase 1533285 pptA 945731 pptA Escherichia coli str. K-12 substr. MG1655 4-oxalocrotonate tautomerase NP_415978.1 1533052 D 511145 CDS NP_415979.2 90111278 946192 complement(1533282..1533851) 1 NC_000913.3 flavin reductase like-protein 1533851 yddH 946192 yddH Escherichia coli str. K-12 substr. MG1655 flavin reductase like-protein NP_415979.2 1533282 R 511145 CDS NP_415980.1 16129422 947251 1534024..1534869 1 NC_000913.3 N-hydroxyarylamine O-acetyltransferase 1534869 nhoA 947251 nhoA Escherichia coli str. K-12 substr. MG1655 N-hydroxyarylamine O-acetyltransferase NP_415980.1 1534024 D 511145 CDS NP_415981.1 16129423 944782 complement(1534965..1535858) 1 NC_000913.3 PhzC-PhzF family protein 1535858 yddE 944782 yddE Escherichia coli str. K-12 substr. MG1655 PhzC-PhzF family protein NP_415981.1 1534965 R 511145 CDS NP_415982.1 16129424 946029 complement(1535937..1536617) 1 NC_000913.3 nitrate reductase 2 (NRZ), gamma subunit 1536617 narV 946029 narV Escherichia coli str. K-12 substr. MG1655 nitrate reductase 2 (NRZ), gamma subunit NP_415982.1 1535937 R 511145 CDS NP_415983.1 16129425 946032 complement(1536614..1537309) 1 NC_000913.3 nitrate reductase 2 (NRZ), delta subunit (assembly subunit) 1537309 narW 946032 narW Escherichia coli str. K-12 substr. MG1655 nitrate reductase 2 (NRZ), delta subunit (assembly subunit) NP_415983.1 1536614 R 511145 CDS NP_415984.1 16129426 946034 complement(1537309..1538853) 1 NC_000913.3 nitrate reductase 2 (NRZ), beta subunit 1538853 narY 946034 narY Escherichia coli str. K-12 substr. MG1655 nitrate reductase 2 (NRZ), beta subunit NP_415984.1 1537309 R 511145 CDS NP_415985.1 16129427 945999 complement(1538850..1542590) 1 NC_000913.3 nitrate reductase 2 (NRZ), alpha subunit 1542590 narZ 945999 narZ Escherichia coli str. K-12 substr. MG1655 nitrate reductase 2 (NRZ), alpha subunit NP_415985.1 1538850 R 511145 CDS NP_415986.1 16129428 945799 complement(1542672..1544060) 1 NC_000913.3 nitrite extrusion protein 2; nitrate/nitrite transporter 1544060 narU 945799 narU Escherichia coli str. K-12 substr. MG1655 nitrate/nitrite transporter NP_415986.1 1542672 R 511145 CDS b1471 947312 complement(join(1544384..1544764,1544764..1545714)) 1 NC_000913.3 pseudogene, leucine-rich protein; putative glycoportein; <NULL_VALUE> 1545714 yddK 947312 yddK Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 1544384 R 511145 CDS b1472 945737 complement(1545750..1546028) 1 NC_000913.3 putative lipoprotein;putative membrane; Not classified; putative outer membrane porin protein; <NULL_VALUE> 1546028 yddL 945737 yddL Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 1545750 R 511145 CDS NP_415990.5 145698260 945942 complement(1546288..1547169) 1 NC_000913.3 aromatic amino acid exporter 1547169 yddG 945942 yddG Escherichia coli str. K-12 substr. MG1655 aromatic amino acid exporter NP_415990.5 1546288 R 511145 CDS NP_415991.1 16129433 946035 1547401..1550448 1 NC_000913.3 formate dehydrogenase-N, nitrate-inducible, alpha subunit; formate dehydrogenase-N, alpha subunit, nitrate-inducible 1550448 fdnG 946035 fdnG Escherichia coli str. K-12 substr. MG1655 formate dehydrogenase-N, alpha subunit, nitrate-inducible NP_415991.1 1547401 D 511145 CDS NP_415992.1 16129434 948794 1550461..1551345 1 NC_000913.3 formate dehydrogenase-N, nitrate-inducible, iron-sulfur beta subunit; formate dehydrogenase-N, Fe-S (beta) subunit, nitrate-inducible 1551345 fdnH 948794 fdnH Escherichia coli str. K-12 substr. MG1655 formate dehydrogenase-N, Fe-S (beta) subunit, nitrate-inducible NP_415992.1 1550461 D 511145 CDS NP_415993.1 16129435 946038 1551338..1551991 1 NC_000913.3 formate dehydrogenase-N, nitrate-inducible, cytochrome B556(Fdn) gamma subunit; formate dehydrogenase-N, cytochrome B556 (gamma) subunit, nitrate-inducible 1551991 fdnI 946038 fdnI Escherichia coli str. K-12 substr. MG1655 formate dehydrogenase-N, cytochrome B556 (gamma) subunit, nitrate-inducible NP_415993.1 1551338 D 511145 CDS NP_415994.4 145698261 946040 complement(1552398..1552682) 1 NC_000913.3 putative DNA-binding transcriptional regulator 1552682 yddM 946040 yddM Escherichia coli str. K-12 substr. MG1655 putative DNA-binding transcriptional regulator NP_415994.4 1552398 R 511145 CDS NP_415995.4 90111280 946036 complement(1552828..1553838) 1 NC_000913.3 alcohol dehydrogenase; ethanol-active dehydrogenase/acetaldehyde-active reductase 1553838 adhP 946036 adhP Escherichia coli str. K-12 substr. MG1655 ethanol-active dehydrogenase/acetaldehyde-active reductase NP_415995.4 1552828 R 511145 CDS NP_415996.2 90111281 946031 complement(1553972..1555669) 1 NC_000913.3 NAD-linked malate dehydrogenase (malic enzyme); malate dehydrogenase, (decarboxylating, NAD-requiring) (malic enzyme) 1555669 maeA 946031 maeA Escherichia coli str. K-12 substr. MG1655 malate dehydrogenase, (decarboxylating, NAD-requiring) (malic enzyme) NP_415996.2 1553972 R 511145 CDS NP_415997.1 16129439 946030 complement(1555826..1555963) 1 NC_000913.3 stationary phase-induced ribosome-associated protein; stationary-phase-induced ribosome-associated protein 1555963 sra 946030 sra Escherichia coli str. K-12 substr. MG1655 stationary-phase-induced ribosome-associated protein NP_415997.1 1555826 R 511145 CDS NP_415998.4 90111282 946041 complement(1556065..1556280) 1 NC_000913.3 biofilm-dependent modulation protein 1556280 bdm 946041 bdm Escherichia coli str. K-12 substr. MG1655 biofilm-dependent modulation protein NP_415998.4 1556065 R 511145 CDS NP_415999.1 16129441 946043 1556625..1557056 1 NC_000913.3 osmotically inducible protein; lipoyl-dependent Cys-based peroxidase, hydroperoxide resistance; salt-shock inducible membrane protein; peroxiredoxin 1557056 osmC 946043 osmC Escherichia coli str. K-12 substr. MG1655 lipoyl-dependent Cys-based peroxidase, hydroperoxide resistance; salt-shock inducible membrane protein; peroxiredoxin NP_415999.1 1556625 D 511145 CDS NP_416000.1 16129442 946020 complement(1557112..1558038) 1 NC_000913.3 ATP-binding component of ABC superfamily; D,D-dipeptide permease system, ATP-binding component 1558038 ddpF 946020 ddpF Escherichia coli str. K-12 substr. MG1655 D,D-dipeptide permease system, ATP-binding component NP_416000.1 1557112 R 511145 CDS NP_416001.1 16129443 946002 complement(1558031..1559017) 1 NC_000913.3 ATP-binding component of ABC superfamily; D,D-dipeptide permease system, ATP-binding component 1559017 ddpD 946002 ddpD Escherichia coli str. K-12 substr. MG1655 D,D-dipeptide permease system, ATP-binding component NP_416001.1 1558031 R 511145 CDS NP_416002.1 16129444 946028 complement(1559014..1559910) 1 NC_000913.3 membrane component of ABC superfamily; D-ala-D-ala transporter subunit 1559910 ddpC 946028 ddpC Escherichia coli str. K-12 substr. MG1655 D-ala-D-ala transporter subunit NP_416002.1 1559014 R 511145 CDS NP_416003.1 16129445 946044 complement(1559907..1560929) 1 NC_000913.3 membrane component of ABC superfamily; D-ala-D-ala transporter subunit 1560929 ddpB 946044 ddpB Escherichia coli str. K-12 substr. MG1655 D-ala-D-ala transporter subunit NP_416003.1 1559907 R 511145 CDS NP_416004.1 16129446 946052 complement(1560931..1562481) 1 NC_000913.3 periplasmic-binding component of ABC superfamily; D-ala-D-a la transporter subunit 1562481 ddpA 946052 ddpA Escherichia coli str. K-12 substr. MG1655 D-ala-D-a la transporter subunit NP_416004.1 1560931 R 511145 CDS NP_416005.1 16129447 945532 complement(1562495..1563076) 1 NC_000913.3 D-ala-D-ala dipeptidase, Zn-dependent 1563076 ddpX 945532 ddpX Escherichia coli str. K-12 substr. MG1655 D-ala-D-ala dipeptidase, Zn-dependent NP_416005.1 1562495 R 511145 CDS NP_416006.4 162135902 945815 complement(1563334..1565733) 1 NC_000913.3 oxygen sensor, c-di-GMP phosphodiesterase, heme-regulated; cold- and stationary phase-induced bioflim regulator 1565733 dosP 945815 dosP Escherichia coli str. K-12 substr. MG1655 oxygen sensor, c-di-GMP phosphodiesterase, heme-regulated; cold- and stationary phase-induced bioflim regulator NP_416006.4 1563334 R 511145 CDS NP_416007.3 145698262 945835 complement(1565758..1567140) 1 NC_000913.3 diguanylate cyclase, cold- and stationary phase-induced oxygen-dependent biofilm regulator 1567140 dosC 945835 dosC Escherichia coli str. K-12 substr. MG1655 diguanylate cyclase, cold- and stationary phase-induced oxygen-dependent biofilm regulator NP_416007.3 1565758 R 511145 CDS NP_416008.1 16129450 945975 complement(1567504..1568823) 1 NC_000913.3 liprotein, glycosyl hydrolase homolog 1568823 yddW 945975 yddW Escherichia coli str. K-12 substr. MG1655 liprotein, glycosyl hydrolase homolog NP_416008.1 1567504 R 511145 CDS NP_416009.1 16129451 946057 complement(1568954..1570489) 1 NC_000913.3 acid sensitivity protein, putative transporter; glutamate:gamma-aminobutyric acid antiporter 1570489 gadC 946057 gadC Escherichia coli str. K-12 substr. MG1655 glutamate:gamma-aminobutyric acid antiporter NP_416009.1 1568954 R 511145 CDS NP_416010.1 16129452 946058 complement(1570645..1572045) 1 NC_000913.3 glutamate decarboxylase isozyme; glutamate decarboxylase B, PLP-dependent 1572045 gadB 946058 gadB Escherichia coli str. K-12 substr. MG1655 glutamate decarboxylase B, PLP-dependent NP_416010.1 1570645 R 511145 CDS NP_416011.1 16129453 946059 complement(1572407..1575202) 1 NC_000913.3 putative zinc protease; putative periplasmic M16 family zinc metalloendopeptidase 1575202 pqqL 946059 pqqL Escherichia coli str. K-12 substr. MG1655 putative periplasmic M16 family zinc metalloendopeptidase NP_416011.1 1572407 R 511145 CDS NP_416012.1 16129454 945961 complement(1575247..1577619) 1 NC_000913.3 putative TonB-dependent outer membrane receptor 1577619 yddB 945961 yddB Escherichia coli str. K-12 substr. MG1655 putative TonB-dependent outer membrane receptor NP_416012.1 1575247 R 511145 CDS NP_416013.1 16129455 945945 complement(1577657..1579342) 1 NC_000913.3 putative multidrug transporter subunit of ABC superfamily, membrane component/ATP-binding component 1579342 yddA 945945 yddA Escherichia coli str. K-12 substr. MG1655 putative multidrug transporter subunit of ABC superfamily, membrane component/ATP-binding component NP_416013.1 1577657 R 511145 CDS NP_416014.4 90111285 945981 complement(1579633..1580790) 1 NC_000913.3 putative enzyme; putative YdeN-specific sulfatase-maturating enzyme 1580790 ydeM 945981 ydeM Escherichia coli str. K-12 substr. MG1655 putative YdeN-specific sulfatase-maturating enzyme NP_416014.4 1579633 R 511145 CDS NP_416015.2 90111286 945957 complement(1580842..1582524) 1 NC_000913.3 putative sulfatase; putative Ser-type periplasmic non-aryl sulfatase 1582524 ydeN 945957 ydeN Escherichia coli str. K-12 substr. MG1655 putative Ser-type periplasmic non-aryl sulfatase NP_416015.2 1580842 R 511145 CDS NP_416016.1 16129458 945922 complement(1582926..1583687) 1 NC_000913.3 putative ARAC-type regulatory protein; UV-inducible global regulator, EvgA-, GadE-dependent 1583687 ydeO 945922 ydeO Escherichia coli str. K-12 substr. MG1655 UV-inducible global regulator, EvgA-, GadE-dependent NP_416016.1 1582926 R 511145 CDS NP_416017.1 16129459 946061 complement(1583762..1583959) 1 NC_000913.3 two-component system connector membrane protein, EvgSA to PhoQP 1583959 safA 946061 safA Escherichia coli str. K-12 substr. MG1655 two-component system connector membrane protein, EvgSA to PhoQP NP_416017.1 1583762 R 511145 CDS NP_416018.1 16129460 946055 complement(1584207..1586486) 1 NC_000913.3 putative oxidoreductase, major subunit; putative oxidoreductase 1586486 ydeP 946055 ydeP Escherichia coli str. K-12 substr. MG1655 putative oxidoreductase NP_416018.1 1584207 R 511145 CDS NP_416019.1 16129461 946050 complement(1586820..1587734) 1 NC_000913.3 putative adhesin; similar to FimH protein; putative fimbrial-like adhesin protein 1587734 ydeQ 946050 ydeQ Escherichia coli str. K-12 substr. MG1655 putative fimbrial-like adhesin protein NP_416019.1 1586820 R 511145 CDS NP_416020.1 16129462 946049 complement(1587793..1588296) 1 NC_000913.3 putative fimbrial-like protein; putative fimbrial-like adhesin protein 1588296 ydeR 946049 ydeR Escherichia coli str. K-12 substr. MG1655 putative fimbrial-like adhesin protein NP_416020.1 1587793 R 511145 CDS NP_416021.1 16129463 946047 complement(1588309..1588839) 1 NC_000913.3 putative fimbrial-like protein; putative fimbrial-like adhesin protein 1588839 ydeS 946047 ydeS Escherichia coli str. K-12 substr. MG1655 putative fimbrial-like adhesin protein NP_416021.1 1588309 R 511145 CDS b1505 946042 complement(1588853..1590079) 1 NC_000913.3 pseudogene; putative outer membrane protein; <NULL_VALUE> 1590079 ydeT 946042 ydeT Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 1588853 R 511145 CDS b1506 946063 complement(join(1590334..1590426,1590426..1590536)) 1 NC_000913.3 pseudogene, AraC family; <NULL_VALUE> 1590536 yneL 946063 yneL Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 1590334 R 511145 CDS NP_416024.1 16129466 946064 complement(1590854..1592176) 1 NC_000913.3 persistence to inhibition of murein or DNA biosynthesis, DNA-binding regulator; inactivating GltX kinase facilitating persister formation; toxin of HipAB TA pair; autokinase 1592176 hipA 946064 hipA Escherichia coli str. K-12 substr. MG1655 inactivating GltX kinase facilitating persister formation; toxin of HipAB TA pair; autokinase NP_416024.1 1590854 R 511145 CDS NP_416025.1 16129467 946065 complement(1592176..1592442) 1 NC_000913.3 persistence to inhibition of murein or DNA biosynthesis; regulatory protein; antitoxin of HipAB toxin-antitoxin system 1592442 hipB 946065 hipB Escherichia coli str. K-12 substr. MG1655 antitoxin of HipAB toxin-antitoxin system NP_416025.1 1592176 R 511145 CDS b4696 7751623 complement(1592665..1597987) 1 NC_000913.3 pseudogene, AidA homolog; <NULL_VALUE> 1597987 yneO 7751623 yneO Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 1592665 R 511145 CDS NP_416028.3 49176118 946069 complement(1598617..1600209) 1 NC_000913.3 autoinducer-2 (AI-2) kinase 1600209 lsrK 946069 lsrK Escherichia coli str. K-12 substr. MG1655 autoinducer-2 (AI-2) kinase NP_416028.3 1598617 R 511145 CDS NP_416029.1 16129471 946070 complement(1600288..1601241) 1 NC_000913.3 lsr operon transcriptional repressor 1601241 lsrR 946070 lsrR Escherichia coli str. K-12 substr. MG1655 lsr operon transcriptional repressor NP_416029.1 1600288 R 511145 CDS NP_416030.1 16129472 945680 1601490..1603025 1 NC_000913.3 autoinducer-2 (AI-2)-transporting ATPase; autoinducer 2 import ATP-binding protein 1603025 lsrA 945680 lsrA Escherichia coli str. K-12 substr. MG1655 autoinducer 2 import ATP-binding protein NP_416030.1 1601490 D 511145 CDS NP_416031.1 16129473 946105 1603019..1604047 1 NC_000913.3 autoinducer-2 (AI-2)-transporting membrane channel protein; membrane component of ABC superfamily; autoinducer 2 import system permease protein 1604047 lsrC 946105 lsrC Escherichia coli str. K-12 substr. MG1655 autoinducer 2 import system permease protein NP_416031.1 1603019 D 511145 CDS NP_416032.1 16129474 946264 1604047..1605039 1 NC_000913.3 autoinducer-2 (AI-2)-transporting membrane channel protein; membrane component of ABC superfamily; autoinducer 2 import system permease protein 1605039 lsrD 946264 lsrD Escherichia coli str. K-12 substr. MG1655 autoinducer 2 import system permease protein NP_416032.1 1604047 D 511145 CDS NP_416033.1 16129475 945418 1605051..1606073 1 NC_000913.3 periplasmic autoinducer-2 (AI-2) binding protein; periplasmic-binding component of ABC superfamily; autoinducer 2-binding protein 1606073 lsrB 945418 lsrB Escherichia coli str. K-12 substr. MG1655 autoinducer 2-binding protein NP_416033.1 1605051 D 511145 CDS NP_416034.1 16129476 946071 1606100..1606975 1 NC_000913.3 putative autoinducer-2 (AI-2) aldolase 1606975 lsrF 946071 lsrF Escherichia coli str. K-12 substr. MG1655 putative autoinducer-2 (AI-2) aldolase NP_416034.1 1606100 D 511145 CDS NP_416035.1 16129477 946073 1606999..1607289 1 NC_000913.3 autoinducer-2 (AI-2) degrading protein LsrG 1607289 lsrG 946073 lsrG Escherichia coli str. K-12 substr. MG1655 autoinducer-2 (AI-2) degrading protein LsrG NP_416035.1 1606999 D 511145 CDS NP_416036.1 16129478 946074 1607346..1608104 1 NC_000913.3 trans-aconitate 2-methyltransferase; trans-aconitate methyltransferase 1608104 tam 946074 tam Escherichia coli str. K-12 substr. MG1655 trans-aconitate methyltransferase NP_416036.1 1607346 D 511145 CDS NP_416037.2 90111287 946188 complement(1608108..1609022) 1 NC_000913.3 bestrophin family putative inner membrane protein 1609022 yneE 946188 yneE Escherichia coli str. K-12 substr. MG1655 bestrophin family putative inner membrane protein NP_416037.2 1608108 R 511145 CDS YP_025302.1 49176119 945542 complement(1609229..1610680) 1 NC_000913.3 altronate oxidoreductase; altronate oxidoreductase, NAD-dependent 1610680 uxaB 945542 uxaB Escherichia coli str. K-12 substr. MG1655 altronate oxidoreductase, NAD-dependent YP_025302.1 1609229 R 511145 CDS NP_416039.1 16129481 947422 complement(1610907..1611854) 1 NC_000913.3 putative membrane-bound diguanylate cyclase 1611854 yneF 947422 yneF Escherichia coli str. K-12 substr. MG1655 putative membrane-bound diguanylate cyclase NP_416039.1 1610907 R 511145 CDS NP_416040.1 16129482 946171 complement(1611966..1612325) 1 NC_000913.3 DUF4186 family protein 1612325 yneG 946171 yneG Escherichia coli str. K-12 substr. MG1655 DUF4186 family protein NP_416040.1 1611966 R 511145 CDS NP_416041.1 16129483 944973 complement(1612325..1613251) 1 NC_000913.3 putative glutaminase; glutaminase 2 1613251 glsB 944973 glsB Escherichia coli str. K-12 substr. MG1655 glutaminase 2 NP_416041.1 1612325 R 511145 CDS NP_416042.2 90111288 947440 complement(1613315..1614703) 1 NC_000913.3 putative aldehyde dehydrogenase; succinate semialdehyde dehydrogenase, NAD(P)+-dependent 1614703 sad 947440 sad Escherichia coli str. K-12 substr. MG1655 succinate semialdehyde dehydrogenase, NAD(P)+-dependent NP_416042.2 1613315 R 511145 CDS NP_416043.1 16129485 946079 1614804..1615685 1 NC_000913.3 putative transcriptional regulator LYSR-type; putative DNA-binding transcriptional regulator 1615685 yneJ 946079 yneJ Escherichia coli str. K-12 substr. MG1655 putative DNA-binding transcriptional regulator NP_416043.1 1614804 D 511145 CDS NP_416044.1 16129486 946080 1615763..1616878 1 NC_000913.3 uncharacterized protein 1616878 yneK 946080 yneK Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_416044.1 1615763 D 511145 CDS NP_416045.1 16129487 947218 1617028..1618218 1 NC_000913.3 L-arabinose/isopropyl-beta-D-thiogalactopyranoside export protein (MFS family); arabinose efflux transporter, arabinose-inducible 1618218 ydeA 947218 ydeA Escherichia coli str. K-12 substr. MG1655 arabinose efflux transporter, arabinose-inducible NP_416045.1 1617028 D 511145 CDS NP_416046.1 16129488 947132 complement(1618243..1618908) 1 NC_000913.3 UPF0056 family inner membrane protein 1618908 marC 947132 marC Escherichia coli str. K-12 substr. MG1655 UPF0056 family inner membrane protein NP_416046.1 1618243 R 511145 CDS NP_416047.4 90111289 945825 1619120..1619554 1 NC_000913.3 multiple antibiotic resistance protein; repressor of mar operon; transcriptional repressor of multiple antibiotic resistance 1619554 marR 945825 marR Escherichia coli str. K-12 substr. MG1655 transcriptional repressor of multiple antibiotic resistance NP_416047.4 1619120 D 511145 CDS NP_416048.2 90111290 947613 1619574..1619957 1 NC_000913.3 multiple antibiotic resistance; transcriptional activator of defense systems; multiple antibiotic resistance transcriptional regulator 1619957 marA 947613 marA Escherichia coli str. K-12 substr. MG1655 multiple antibiotic resistance transcriptional regulator NP_416048.2 1619574 D 511145 CDS NP_416049.1 16129491 946184 1619989..1620207 1 NC_000913.3 multiple antibiotic resistance protein; mar operon regulator, periplasmic 1620207 marB 946184 marB Escherichia coli str. K-12 substr. MG1655 mar operon regulator, periplasmic NP_416049.1 1619989 D 511145 CDS NP_416050.4 90111291 946081 complement(1620238..1621137) 1 NC_000913.3 amino acid metabolite efflux pump; cysteine and O-acetyl-L-serine efflux system 1621137 eamA 946081 eamA Escherichia coli str. K-12 substr. MG1655 cysteine and O-acetyl-L-serine efflux system NP_416050.4 1620238 R 511145 CDS NP_416051.1 16129493 946083 1621332..1622519 1 NC_000913.3 putative transport protein; putative transporter 1622519 ydeE 946083 ydeE Escherichia coli str. K-12 substr. MG1655 putative transporter NP_416051.1 1621332 D 511145 CDS YP_001165319.1 145698263 5061497 1622646..1622741 1 NC_000913.3 inner membrane-associated protein 1622741 yneM 5061497 yneM Escherichia coli str. K-12 substr. MG1655 inner membrane-associated protein YP_001165319.1 1622646 D 511145 CDS NP_416052.1 16129494 946075 complement(1622960..1623850) 1 NC_000913.3 diguanylate cyclase, zinc-sensing 1623850 dgcZ 946075 dgcZ Escherichia coli str. K-12 substr. MG1655 diguanylate cyclase, zinc-sensing NP_416052.1 1622960 R 511145 CDS NP_416054.1 16129495 946068 complement(1624105..1624497) 1 NC_000913.3 hydrogen peroxide resistance OB fold protein; putative periplasmic protein 1624497 ydeI 946068 ydeI Escherichia coli str. K-12 substr. MG1655 hydrogen peroxide resistance OB fold protein; putative periplasmic protein NP_416054.1 1624105 R 511145 CDS NP_416055.1 16129496 946067 1624773..1625291 1 NC_000913.3 inactive PncC family protein 1625291 ydeJ 946067 ydeJ Escherichia coli str. K-12 substr. MG1655 inactive PncC family protein NP_416055.1 1624773 D 511145 CDS NP_416056.1 16129497 946084 complement(1625335..1627380) 1 NC_000913.3 dipeptidyl carboxypeptidase II 1627380 dcp 946084 dcp Escherichia coli str. K-12 substr. MG1655 dipeptidyl carboxypeptidase II NP_416056.1 1625335 R 511145 CDS NP_416057.1 16129498 946085 1627517..1628263 1 NC_000913.3 putative oxidoreductase; NADP-dependent 3-hydroxy acid dehydrogenase; malonic semialdehyde reductase 1628263 ydfG 946085 ydfG Escherichia coli str. K-12 substr. MG1655 NADP-dependent 3-hydroxy acid dehydrogenase; malonic semialdehyde reductase NP_416057.1 1627517 D 511145 CDS NP_416058.1 16129499 946087 1628352..1629038 1 NC_000913.3 transcriptional repressor for rspAB 1629038 rspR 946087 rspR Escherichia coli str. K-12 substr. MG1655 transcriptional repressor for rspAB NP_416058.1 1628352 D 511145 CDS NP_416059.1 16129500 948796 1629215..1629418 1 NC_000913.3 selenoprotein, function unknown 1629418 ydfZ 948796 ydfZ Escherichia coli str. K-12 substr. MG1655 selenoprotein, function unknown NP_416059.1 1629215 D 511145 CDS NP_416060.1 16129501 945861 complement(1629453..1630913) 1 NC_000913.3 putative oxidoreductase; putative NAD-dependent D-mannonate oxidoreductase 1630913 ydfI 945861 ydfI Escherichia coli str. K-12 substr. MG1655 putative NAD-dependent D-mannonate oxidoreductase NP_416060.1 1629453 R 511145 CDS b4600 944802 complement(join(1631002..1632285,1652755..1652838)) 1 NC_000913.3 pseudogene, MFS transporter family; interrupted by Qin prophage;Phage or Prophage Related; putative transport protein; <NULL_VALUE> 1652838 ydfJ 944802 ydfJ Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 1631002 R 511145 CDS NP_416062.2 345452719 947451 1633072..1633305 1 NC_000913.3 cold shock protein, function unknown, Qin prophage 1633305 ydfK 947451 ydfK Escherichia coli str. K-12 substr. MG1655 cold shock protein, function unknown, Qin prophage NP_416062.2 1633072 D 511145 CDS NP_416063.1 16129504 946088 1633622..1634212 1 NC_000913.3 Qin prophage; putative site-specific recombinase 1634212 pinQ 946088 pinQ Escherichia coli str. K-12 substr. MG1655 Qin prophage; putative site-specific recombinase NP_416063.1 1633622 D 511145 CDS NP_416064.1 16129505 946060 complement(1634310..1634885) 1 NC_000913.3 tail fiber assembly protein homolog from lambdoid prophage Qin; Qin prophage; putative tail fiber assembly protein 1634885 tfaQ 946060 tfaQ Escherichia coli str. K-12 substr. MG1655 Qin prophage; putative tail fiber assembly protein NP_416064.1 1634310 R 511145 CDS NP_416065.1 16129506 946098 complement(1634885..1635847) 1 NC_000913.3 Qin prophage; putative side tail fiber assembly protein 1635847 stfQ 946098 stfQ Escherichia coli str. K-12 substr. MG1655 Qin prophage; putative side tail fiber assembly protein NP_416065.1 1634885 R 511145 CDS b1548 946021 complement(1635840..1636367) 1 NC_000913.3 pseudogene, Qin prophage; Phage DNA packaging protein Nu1 family;Phage or Prophage Related; DNA packaging protein NU1 homolog from lambdoid prophage Qin; <NULL_VALUE> 1636367 nohQ 946021 nohQ Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 1635840 R 511145 CDS YP_588454.1 94541112 1450267 1636756..1636989 1 NC_000913.3 uncharacterized protein, Qin prophage 1636989 ynfO 1450267 ynfO Escherichia coli str. K-12 substr. MG1655 uncharacterized protein, Qin prophage YP_588454.1 1636756 D 511145 CDS NP_416067.2 90111292 945992 1637047..1637457 1 NC_000913.3 Qin prophage; uncharacterized protein 1637457 ydfO 945992 ydfO Escherichia coli str. K-12 substr. MG1655 Qin prophage; uncharacterized protein NP_416067.2 1637047 D 511145 CDS NP_416068.2 90111293 946054 complement(1637609..1637782) 1 NC_000913.3 Qin prophage; multicopy suppressor of secG(Cs) and fabA6(Ts) 1637782 gnsB 946054 gnsB Escherichia coli str. K-12 substr. MG1655 Qin prophage; multicopy suppressor of secG(Cs) and fabA6(Ts) NP_416068.2 1637609 R 511145 CDS NP_416069.2 90111294 946097 complement(1637954..1638109) 1 NC_000913.3 Qin prophage; cold shock-induced protein 1638109 ynfN 946097 ynfN Escherichia coli str. K-12 substr. MG1655 Qin prophage; cold shock-induced protein NP_416069.2 1637954 R 511145 CDS NP_416070.1 16129511 946099 complement(1638455..1638667) 1 NC_000913.3 cold shock-like protein; Qin prophage; cold shock protein 1638667 cspI 946099 cspI Escherichia coli str. K-12 substr. MG1655 Qin prophage; cold shock protein NP_416070.1 1638455 R 511145 CDS NP_416071.1 16129512 946101 complement(1639030..1639527) 1 NC_000913.3 completely contained in another CDS; Rz-like protein, Qin prophage 1639527 rzpQ 946101 rzpQ Escherichia coli str. K-12 substr. MG1655 Rz-like protein, Qin prophage NP_416071.1 1639030 R 511145 CDS YP_002791241.1 226524715 7751615 complement(1639080..1639334) 1 NC_000913.3 completely contained in another CDS; putative Rz1-like lipoprotein, Qin prophage 1639334 rzoQ 7751615 rzoQ Escherichia coli str. K-12 substr. MG1655 putative Rz1-like lipoprotein, Qin prophage YP_002791241.1 1639080 R 511145 CDS NP_416072.1 16129513 946100 complement(1639524..1640057) 1 NC_000913.3 Qin prophage; putative lysozyme 1640057 rrrQ 946100 rrrQ Escherichia coli str. K-12 substr. MG1655 Qin prophage; putative lysozyme NP_416072.1 1639524 R 511145 CDS NP_416073.1 16129514 946095 complement(1640054..1640365) 1 NC_000913.3 Qin prophage; uncharacterized protein 1640365 ydfR 946095 ydfR Escherichia coli str. K-12 substr. MG1655 Qin prophage; uncharacterized protein NP_416073.1 1640054 R 511145 CDS NP_416074.4 90111295 946093 complement(1640370..1640585) 1 NC_000913.3 Qin prophage; putative S lysis protein 1640585 essQ 946093 essQ Escherichia coli str. K-12 substr. MG1655 Qin prophage; putative S lysis protein NP_416074.4 1640370 R 511145 CDS NP_416075.1 16129516 946091 complement(1641339..1641554) 1 NC_000913.3 Qin prophage; cold shock protein 1641554 cspB 946091 cspB Escherichia coli str. K-12 substr. MG1655 Qin prophage; cold shock protein NP_416075.1 1641339 R 511145 CDS NP_416076.1 16129517 946090 1641855..1642067 1 NC_000913.3 Qin prophage; cold shock protein 1642067 cspF 946090 cspF Escherichia coli str. K-12 substr. MG1655 Qin prophage; cold shock protein NP_416076.1 1641855 D 511145 CDS NP_416077.4 90111296 946103 complement(1642489..1643241) 1 NC_000913.3 Qin prophage; putative antitermination protein Q 1643241 quuQ 946103 quuQ Escherichia coli str. K-12 substr. MG1655 Qin prophage; putative antitermination protein Q NP_416077.4 1642489 R 511145 CDS NP_416078.4 226524716 946108 complement(1643255..1644304) 1 NC_000913.3 Qin prophage; uncharacterized protein 1644304 ydfU 946108 ydfU Escherichia coli str. K-12 substr. MG1655 Qin prophage; uncharacterized protein NP_416078.4 1643255 R 511145 CDS NP_416079.1 16129520 946109 complement(1644651..1644902) 1 NC_000913.3 Qin prophage; uncharacterized protein 1644902 rem 946109 rem Escherichia coli str. K-12 substr. MG1655 Qin prophage; uncharacterized protein NP_416079.1 1644651 R 511145 CDS NP_416080.1 16129521 948616 complement(1645119..1645274) 1 NC_000913.3 polypeptide destructive to membrane potential; hokD (relF) regulatory elements are deleted, and the gene is fused to the relBE transcript; evolutionary relic?; Qin prophage; small toxic polypeptide 1645274 hokD 948616 hokD Escherichia coli str. K-12 substr. MG1655 Qin prophage; small toxic polypeptide NP_416080.1 1645119 R 511145 CDS NP_416081.1 16129522 947549 complement(1645346..1645633) 1 NC_000913.3 Qin prophage; toxin of the RelE-RelB toxin-antitoxin system 1645633 relE 947549 relE Escherichia coli str. K-12 substr. MG1655 Qin prophage; toxin of the RelE-RelB toxin-antitoxin system NP_416081.1 1645346 R 511145 CDS NP_416082.1 16129523 948308 complement(1645633..1645872) 1 NC_000913.3 negative regulator of translation; Qin prophage; bifunctional antitoxin of the RelE-RelB toxin-antitoxin system/ transcriptional repressor 1645872 relB 948308 relB Escherichia coli str. K-12 substr. MG1655 Qin prophage; bifunctional antitoxin of the RelE-RelB toxin-antitoxin system/ transcriptional repressor NP_416082.1 1645633 R 511145 CDS NP_416083.1 16129524 948801 1645897..1646202 1 NC_000913.3 Qin prophage; uncharacterized protein 1646202 ydfV 948801 ydfV Escherichia coli str. K-12 substr. MG1655 Qin prophage; uncharacterized protein NP_416083.1 1645897 D 511145 CDS NP_416084.1 16129525 947392 1646405..1646737 1 NC_000913.3 Qin prophage; uncharacterized protein 1646737 flxA 947392 flxA Escherichia coli str. K-12 substr. MG1655 Qin prophage; uncharacterized protein NP_416084.1 1646405 D 511145 CDS b1567 946111 complement(1647174..1647356) 1 NC_000913.3 pseudogene, integrase fragment, Qin prophage;Phage or Prophage Related; <NULL_VALUE> 1647356 intK 946111 intK Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 1647174 R 511145 CDS b1568 946112 complement(1647358..1647636) 1 NC_000913.3 pseudogene, Qin prophage;Phage or Prophage Related; <NULL_VALUE> 1647636 ydfX 946112 ydfX Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 1647358 R 511145 CDS NP_416087.1 16129528 946120 complement(1647620..1647850) 1 NC_000913.3 regulator of dicB; Qin prophage; DNA-binding transcriptional regulator for DicB 1647850 dicC 946120 dicC Escherichia coli str. K-12 substr. MG1655 Qin prophage; DNA-binding transcriptional regulator for DicB NP_416087.1 1647620 R 511145 CDS NP_416088.1 16129529 946241 1647934..1648341 1 NC_000913.3 regulator of dicB; Qin prophage; putative regulator for DicB 1648341 dicA 946241 dicA Escherichia coli str. K-12 substr. MG1655 Qin prophage; putative regulator for DicB NP_416088.1 1647934 D 511145 CDS NP_416089.1 16129530 946082 1648508..1648663 1 NC_000913.3 Qin prophage; uncharacterized protein 1648663 ydfA 946082 ydfA Escherichia coli str. K-12 substr. MG1655 Qin prophage; uncharacterized protein NP_416089.1 1648508 D 511145 CDS NP_416090.2 90111298 946176 1648665..1648793 1 NC_000913.3 Qin prophage; uncharacterized protein 1648793 ydfB 946176 ydfB Escherichia coli str. K-12 substr. MG1655 Qin prophage; uncharacterized protein NP_416090.2 1648665 D 511145 CDS NP_416091.1 16129532 946107 1648823..1649041 1 NC_000913.3 uncharacterized protein, Qin prophage 1649041 ydfC 946107 ydfC Escherichia coli str. K-12 substr. MG1655 uncharacterized protein, Qin prophage NP_416091.1 1648823 D 511145 CDS NP_416092.1 16129533 946110 1649609..1649797 1 NC_000913.3 inhibition of cell division; Qin prophage; cell division inhibition protein 1649797 dicB 946110 dicB Escherichia coli str. K-12 substr. MG1655 Qin prophage; cell division inhibition protein NP_416092.1 1649609 D 511145 CDS NP_416093.1 16129534 946102 1649794..1649985 1 NC_000913.3 Qin prophage; uncharacterized protein 1649985 ydfD 946102 ydfD Escherichia coli str. K-12 substr. MG1655 Qin prophage; uncharacterized protein NP_416093.1 1649794 D 511145 CDS b1577 946113 1650078..1650842 1 NC_000913.3 Qin prophage; pseudogene;Phage or Prophage Related; <NULL_VALUE> 1650842 ydfE 946113 ydfE Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 1650078 D 511145 CDS b1578 946118 1650845..1651537 1 NC_000913.3 IS2 transposase TnpB;IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related; <NULL_VALUE> 1651537 insD1 946118 insD1 Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 1650845 D 511145 CDS b1579 946130 1651551..1652708 1 NC_000913.3 pseudogene, Qin prophage; phage integrase family;Phage or Prophage Related; <NULL_VALUE> 1652708 intQ 946130 intQ Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 1651551 D 511145 CDS NP_416097.1 16129538 946127 complement(1652896..1653915) 1 NC_000913.3 starvation sensing protein; putative Zn-dependent NAD(P)-binding oxidoreductase 1653915 rspB 946127 rspB Escherichia coli str. K-12 substr. MG1655 putative Zn-dependent NAD(P)-binding oxidoreductase NP_416097.1 1652896 R 511145 CDS NP_416098.1 16129539 946126 complement(1653927..1655141) 1 NC_000913.3 starvation sensing protein; bifunctional D-altronate/D-mannonate dehydratase 1655141 rspA 946126 rspA Escherichia coli str. K-12 substr. MG1655 bifunctional D-altronate/D-mannonate dehydratase NP_416098.1 1653927 R 511145 CDS NP_416099.1 16129540 946125 complement(1655347..1655673) 1 NC_000913.3 UPF0060 family inner membrane protein 1655673 ynfA 946125 ynfA Escherichia coli str. K-12 substr. MG1655 UPF0060 family inner membrane protein NP_416099.1 1655347 R 511145 CDS NP_416100.1 16129541 946119 1655808..1656149 1 NC_000913.3 UPF0482 family putative periplasmic protein 1656149 ynfB 946119 ynfB Escherichia coli str. K-12 substr. MG1655 UPF0482 family putative periplasmic protein NP_416100.1 1655808 D 511145 CDS NP_416101.1 16129542 946117 1656184..1656744 1 NC_000913.3 spermidine N1-acetyltransferase 1656744 speG 946117 speG Escherichia coli str. K-12 substr. MG1655 spermidine N1-acetyltransferase NP_416101.1 1656184 D 511145 CDS NP_416102.2 90111299 946131 complement(1656747..1657457) 1 NC_000913.3 UPF0257 family lipoprotein 1657457 ynfC 946131 ynfC Escherichia coli str. K-12 substr. MG1655 UPF0257 family lipoprotein NP_416102.2 1656747 R 511145 CDS NP_416103.2 90111300 946133 1657565..1657870 1 NC_000913.3 DUF1161 family periplasmic protein 1657870 ynfD 946133 ynfD Escherichia coli str. K-12 substr. MG1655 DUF1161 family periplasmic protein NP_416103.2 1657565 D 511145 CDS NP_416104.1 16129545 946135 1658069..1660495 1 NC_000913.3 putative selenate reductase, periplasmic 1660495 ynfE 946135 ynfE Escherichia coli str. K-12 substr. MG1655 putative selenate reductase, periplasmic NP_416104.1 1658069 D 511145 CDS NP_416105.4 171701681 945268 1660556..1662979 1 NC_000913.3 S- and N-oxide reductase, A subunit, periplasmic 1662979 ynfF 945268 ynfF Escherichia coli str. K-12 substr. MG1655 S- and N-oxide reductase, A subunit, periplasmic NP_416105.4 1660556 D 511145 CDS NP_416106.1 16129547 945638 1662990..1663607 1 NC_000913.3 oxidoreductase, Fe-S subunit 1663607 ynfG 945638 ynfG Escherichia coli str. K-12 substr. MG1655 oxidoreductase, Fe-S subunit NP_416106.1 1662990 D 511145 CDS NP_416107.1 16129548 945822 1663609..1664463 1 NC_000913.3 oxidoreductase, membrane subunit 1664463 ynfH 945822 ynfH Escherichia coli str. K-12 substr. MG1655 oxidoreductase, membrane subunit NP_416107.1 1663609 D 511145 CDS NP_416108.2 90111302 945987 1664506..1665120 1 NC_000913.3 twin-argninine leader-binding protein for DmsA and TorA 1665120 dmsD 945987 dmsD Escherichia coli str. K-12 substr. MG1655 twin-argninine leader-binding protein for DmsA and TorA NP_416108.2 1664506 D 511145 CDS NP_416109.2 90111303 947179 1665315..1666571 1 NC_000913.3 H(+)/Cl(-) exchange transporter 1666571 clcB 947179 clcB Escherichia coli str. K-12 substr. MG1655 H(+)/Cl(-) exchange transporter NP_416109.2 1665315 D 511145 CDS NP_416110.4 90111304 944927 complement(1666524..1667219) 1 NC_000913.3 putative dethiobiotin synthetase 1667219 ynfK 944927 ynfK Escherichia coli str. K-12 substr. MG1655 putative dethiobiotin synthetase NP_416110.4 1666524 R 511145 CDS NP_416111.1 16129552 945510 complement(1667344..1668564) 1 NC_000913.3 putative NAGC-like transcriptional regulator; glucosamine anaerobic growth regulon transcriptional repressor; autorepressor 1668564 mlc 945510 mlc Escherichia coli str. K-12 substr. MG1655 glucosamine anaerobic growth regulon transcriptional repressor; autorepressor NP_416111.1 1667344 R 511145 CDS NP_416112.1 16129553 946136 complement(1668699..1669592) 1 NC_000913.3 putative transcriptional regulator LYSR-type; LysR family putative transcriptional regulator 1669592 ynfL 946136 ynfL Escherichia coli str. K-12 substr. MG1655 LysR family putative transcriptional regulator NP_416112.1 1668699 R 511145 CDS NP_416113.1 16129554 946138 1669699..1670952 1 NC_000913.3 putative transport protein; putative arabinose efflux transporter 1670952 ynfM 946138 ynfM Escherichia coli str. K-12 substr. MG1655 putative arabinose efflux transporter NP_416113.1 1669699 D 511145 CDS NP_416114.2 90111305 945103 1671376..1671684 1 NC_000913.3 acid shock protein; acid shock-inducible periplasmic protein 1671684 asr 945103 asr Escherichia coli str. K-12 substr. MG1655 acid shock-inducible periplasmic protein NP_416114.2 1671376 D 511145 CDS YP_001165320.1 145698267 5061510 1671777..1671860 1 NC_000913.3 stationary phase-induced protein 1671860 ydgU 5061510 ydgU Escherichia coli str. K-12 substr. MG1655 stationary phase-induced protein YP_001165320.1 1671777 D 511145 CDS NP_416115.1 16129556 946436 1671960..1672781 1 NC_000913.3 putative peptidase 1672781 ydgD 946436 ydgD Escherichia coli str. K-12 substr. MG1655 putative peptidase NP_416115.1 1671960 D 511145 CDS NP_416116.1 16129557 947333 complement(1672820..1673149) 1 NC_000913.3 possible chaperone; multidrug efflux system transporter 1673149 mdtI 947333 mdtI Escherichia coli str. K-12 substr. MG1655 multidrug efflux system transporter NP_416116.1 1672820 R 511145 CDS NP_416117.1 16129558 946139 complement(1673136..1673501) 1 NC_000913.3 possible chaperone; multidrug efflux system transporter 1673501 mdtJ 946139 mdtJ Escherichia coli str. K-12 substr. MG1655 multidrug efflux system transporter NP_416117.1 1673136 R 511145 CDS NP_416118.1 16129559 946142 1673913..1674947 1 NC_000913.3 putative transport protein; pheromone AI-2 transporter 1674947 tqsA 946142 tqsA Escherichia coli str. K-12 substr. MG1655 pheromone AI-2 transporter NP_416118.1 1673913 D 511145 CDS NP_416119.1 16129560 946144 complement(1674972..1676360) 1 NC_000913.3 pyridine nucleotide transhydrogenase, beta subunit 1676360 pntB 946144 pntB Escherichia coli str. K-12 substr. MG1655 pyridine nucleotide transhydrogenase, beta subunit NP_416119.1 1674972 R 511145 CDS NP_416120.1 16129561 946628 complement(1676371..1677903) 1 NC_000913.3 pyridine nucleotide transhydrogenase, alpha subunit 1677903 pntA 946628 pntA Escherichia coli str. K-12 substr. MG1655 pyridine nucleotide transhydrogenase, alpha subunit NP_416120.1 1676371 R 511145 CDS NP_416121.1 16129562 945117 1678427..1679371 1 NC_000913.3 DUF1471 family periplasmic protein 1679371 ydgH 945117 ydgH Escherichia coli str. K-12 substr. MG1655 DUF1471 family periplasmic protein NP_416121.1 1678427 D 511145 CDS NP_416122.1 16129563 945159 1679557..1680939 1 NC_000913.3 putative arginine/ornithine antiporter; putative arginine/ornithine antiporter transporter 1680939 ydgI 945159 ydgI Escherichia coli str. K-12 substr. MG1655 putative arginine/ornithine antiporter transporter NP_416122.1 1679557 D 511145 CDS NP_416123.1 16129564 949096 1680976..1681698 1 NC_000913.3 putative oxidoreductase; dihydromonapterin reductase, NADPH-dependent; dihydrofolate reductase isozyme 1681698 folM 949096 folM Escherichia coli str. K-12 substr. MG1655 dihydromonapterin reductase, NADPH-dependent; dihydrofolate reductase isozyme NP_416123.1 1680976 D 511145 CDS NP_416124.1 16129565 945156 complement(1681695..1682030) 1 NC_000913.3 GlpM family inner membrane protein 1682030 ydgC 945156 ydgC Escherichia coli str. K-12 substr. MG1655 GlpM family inner membrane protein NP_416124.1 1681695 R 511145 CDS NP_416125.2 145698268 946199 1682159..1682878 1 NC_000913.3 response transcriptional regulatory protein (RstB sensor); response regulator of RstAB two-component system, low Mg-responsive via PhoQP 1682878 rstA 946199 rstA Escherichia coli str. K-12 substr. MG1655 response regulator of RstAB two-component system, low Mg-responsive via PhoQP NP_416125.2 1682159 D 511145 CDS NP_416126.1 16129567 948870 1682882..1684183 1 NC_000913.3 sensor histidine protein kinase (RstA regulator); sensory histidine kinase of RstAB two-component system, low Mg-responsive via PhoQP 1684183 rstB 948870 rstB Escherichia coli str. K-12 substr. MG1655 sensory histidine kinase of RstAB two-component system, low Mg-responsive via PhoQP NP_416126.1 1682882 D 511145 CDS NP_416127.1 16129568 945135 1684259..1685188 1 NC_000913.3 DNA-binding protein; inhibition of replication at Ter sites; inhibitor of replication at Ter, DNA-binding protein 1685188 tus 945135 tus Escherichia coli str. K-12 substr. MG1655 inhibitor of replication at Ter, DNA-binding protein NP_416127.1 1684259 D 511145 CDS NP_416128.1 16129569 946147 complement(1685185..1686588) 1 NC_000913.3 fumarase C= fumarate hydratase Class II; isozyme; fumarate hydratase (fumarase C),aerobic Class II 1686588 fumC 946147 fumC Escherichia coli str. K-12 substr. MG1655 fumarate hydratase (fumarase C),aerobic Class II NP_416128.1 1685185 R 511145 CDS NP_416129.1 16129570 946826 complement(1686731..1688377) 1 NC_000913.3 fumarase A = fumarate hydratase Class I; aerobic isozyme; fumarate hydratase (fumarase A), aerobic Class I 1688377 fumA 946826 fumA Escherichia coli str. K-12 substr. MG1655 fumarate hydratase (fumarase A), aerobic Class I NP_416129.1 1686731 R 511145 CDS NP_416130.3 49176125 944840 1688576..1689751 1 NC_000913.3 mannose-6-phosphate isomerase 1689751 manA 944840 manA Escherichia coli str. K-12 substr. MG1655 mannose-6-phosphate isomerase NP_416130.3 1688576 D 511145 CDS NP_416131.1 16129572 946172 1689852..1691360 1 NC_000913.3 DUF945 family protein 1691360 ydgA 946172 ydgA Escherichia coli str. K-12 substr. MG1655 DUF945 family protein NP_416131.1 1689852 D 511145 CDS NP_416132.2 90111306 944820 complement(1691586..1692851) 1 NC_000913.3 membrane-associated protein; putative outer membrane porin for beta-glucuronides porin protein 1692851 uidC 944820 uidC Escherichia coli str. K-12 substr. MG1655 putative outer membrane porin for beta-glucuronides porin protein NP_416132.2 1691586 R 511145 CDS NP_416133.1 16129574 947484 complement(1692890..1694263) 1 NC_000913.3 glucuronide permease; glucuronide transporter 1694263 uidB 947484 uidB Escherichia coli str. K-12 substr. MG1655 glucuronide transporter NP_416133.1 1692890 R 511145 CDS NP_416134.1 16129575 946149 complement(1694260..1696071) 1 NC_000913.3 beta-D-glucuronidase 1696071 uidA 946149 uidA Escherichia coli str. K-12 substr. MG1655 beta-D-glucuronidase NP_416134.1 1694260 R 511145 CDS NP_416135.1 16129576 946150 complement(1696462..1697052) 1 NC_000913.3 repressor for uid operon; transcriptional repressor 1697052 uidR 946150 uidR Escherichia coli str. K-12 substr. MG1655 transcriptional repressor NP_416135.1 1696462 R 511145 CDS NP_416136.1 16129577 946151 complement(1697273..1698040) 1 NC_000913.3 NAD-dependent 7alpha-hydroxysteroid dehydrogenase, dehydroxylation of bile acids; 7-alpha-hydroxysteroid dehydrogenase, NAD-dependent 1698040 hdhA 946151 hdhA Escherichia coli str. K-12 substr. MG1655 7-alpha-hydroxysteroid dehydrogenase, NAD-dependent NP_416136.1 1697273 R 511145 CDS NP_416137.1 16129578 947104 complement(1698152..1699180) 1 NC_000913.3 maltose regulon regulatory protein; transcriptional repressor of Mal regulon 1699180 malI 947104 malI Escherichia coli str. K-12 substr. MG1655 transcriptional repressor of Mal regulon NP_416137.1 1698152 R 511145 CDS NP_416138.1 16129579 946009 1699355..1700947 1 NC_000913.3 PTS system, maltose and glucose-specific IIABC component; fused maltose and glucose-specific PTS enzymes: IIB component, IIC component 1700947 malX 946009 malX Escherichia coli str. K-12 substr. MG1655 fused maltose and glucose-specific PTS enzymes: IIB component, IIC component NP_416138.1 1699355 D 511145 CDS NP_416139.1 16129580 945937 1700957..1702129 1 NC_000913.3 cystathionine beta-lyase; maltose regulon modulator; bifunctional beta-cystathionase, PLP-dependent/ regulator of maltose regulon 1702129 malY 945937 malY Escherichia coli str. K-12 substr. MG1655 bifunctional beta-cystathionase, PLP-dependent/ regulator of maltose regulon NP_416139.1 1700957 D 511145 CDS NP_416140.1 16129581 945851 1702233..1703234 1 NC_000913.3 adenosine deaminase 1703234 add 945851 add Escherichia coli str. K-12 substr. MG1655 adenosine deaminase NP_416140.1 1702233 D 511145 CDS NP_416141.4 90111307 947164 complement(1703268..1704308) 1 NC_000913.3 putative oxidoreductase 1704308 ydgJ 947164 ydgJ Escherichia coli str. K-12 substr. MG1655 putative oxidoreductase NP_416141.4 1703268 R 511145 CDS YP_025303.1 49176127 2847682 1704551..1704676 1 NC_000913.3 beta-lactam resistance protein; beta-lactam resistance membrane protein; divisome-associated protein 1704676 blr 2847682 blr Escherichia coli str. K-12 substr. MG1655 beta-lactam resistance membrane protein; divisome-associated protein YP_025303.1 1704551 D 511145 CDS NP_416142.1 16129583 946152 1704949..1705164 1 NC_000913.3 nucleoid-associated oriC-binding protein; H-NS and StpA stabilizing factor 1705164 cnu 946152 cnu Escherichia coli str. K-12 substr. MG1655 nucleoid-associated oriC-binding protein; H-NS and StpA stabilizing factor NP_416142.1 1704949 D 511145 CDS NP_416143.2 90111308 946154 1705250..1705690 1 NC_000913.3 DUF2569 family inner membrane protein 1705690 ydgK 946154 ydgK Escherichia coli str. K-12 substr. MG1655 DUF2569 family inner membrane protein NP_416143.2 1705250 D 511145 CDS NP_416144.1 16129585 946148 1705767..1706348 1 NC_000913.3 SoxR iron-sulfur cluster reduction factor component; inner membrane protein of electron transport complex 1706348 rsxA 946148 rsxA Escherichia coli str. K-12 substr. MG1655 SoxR iron-sulfur cluster reduction factor component; inner membrane protein of electron transport complex NP_416144.1 1705767 D 511145 CDS NP_416145.1 16129586 946146 1706348..1706926 1 NC_000913.3 SoxR iron-sulfur cluster reduction factor component; putative iron-sulfur protein 1706926 rsxB 946146 rsxB Escherichia coli str. K-12 substr. MG1655 SoxR iron-sulfur cluster reduction factor component; putative iron-sulfur protein NP_416145.1 1706348 D 511145 CDS NP_416146.1 16129587 946137 1706919..1709141 1 NC_000913.3 SoxR iron-sulfur cluster reduction factor component; putative membrane-associated NADH oxidoreductase of electron transport complex 1709141 rsxC 946137 rsxC Escherichia coli str. K-12 substr. MG1655 SoxR iron-sulfur cluster reduction factor component; putative membrane-associated NADH oxidoreductase of electron transport complex NP_416146.1 1706919 D 511145 CDS NP_416147.1 16129588 946134 1709142..1710200 1 NC_000913.3 electron transport complex protein; SoxR iron-sulfur cluster reduction factor component; putative membrane protein of electron transport complex 1710200 rsxD 946134 rsxD Escherichia coli str. K-12 substr. MG1655 SoxR iron-sulfur cluster reduction factor component; putative membrane protein of electron transport complex NP_416147.1 1709142 D 511145 CDS NP_416148.1 16129589 946158 1710204..1710824 1 NC_000913.3 SoxR iron-sulfur cluster reduction factor component; putative membrane protein of electron transport complex 1710824 rsxG 946158 rsxG Escherichia coli str. K-12 substr. MG1655 SoxR iron-sulfur cluster reduction factor component; putative membrane protein of electron transport complex NP_416148.1 1710204 D 511145 CDS NP_416149.1 16129590 947509 1710828..1711523 1 NC_000913.3 electron transport complex protein; SoxR iron-sulfur cluster reduction factor component; electron transport inner membrane NADH-quinone reductase 1711523 rsxE 947509 rsxE Escherichia coli str. K-12 substr. MG1655 SoxR iron-sulfur cluster reduction factor component; electron transport inner membrane NADH-quinone reductase NP_416149.1 1710828 D 511145 CDS NP_416150.1 16129591 947122 1711523..1712158 1 NC_000913.3 endonuclease III; specific for apurinic and/or apyrimidinic sites; DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III) 1712158 nth 947122 nth Escherichia coli str. K-12 substr. MG1655 DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III) NP_416150.1 1711523 D 511145 CDS NP_416151.1 16129592 947436 1712769..1714271 1 NC_000913.3 putative transport protein; dipeptide and tripeptide permease A 1714271 dtpA 947436 dtpA Escherichia coli str. K-12 substr. MG1655 dipeptide and tripeptide permease A NP_416151.1 1712769 D 511145 CDS NP_416152.1 16129593 945758 1714377..1714982 1 NC_000913.3 glutathionine S-transferase 1714982 gstA 945758 gstA Escherichia coli str. K-12 substr. MG1655 glutathionine S-transferase NP_416152.1 1714377 D 511145 CDS NP_416153.1 16129594 946162 complement(1715026..1715889) 1 NC_000913.3 pyridoxal kinase 2 / pyridoxine kinase; pyridoxamine kinase 1715889 pdxY 946162 pdxY Escherichia coli str. K-12 substr. MG1655 pyridoxamine kinase NP_416153.1 1715026 R 511145 CDS NP_416154.1 16129595 948855 complement(1715948..1717222) 1 NC_000913.3 tyrosine tRNA synthetase; tyrosyl-tRNA synthetase 1717222 tyrS 948855 tyrS Escherichia coli str. K-12 substr. MG1655 tyrosyl-tRNA synthetase NP_416154.1 1715948 R 511145 CDS NP_416155.1 16129596 946806 complement(1717351..1718007) 1 NC_000913.3 pyridoxinephosphate oxidase; pyridoxine 5'-phosphate oxidase 1718007 pdxH 946806 pdxH Escherichia coli str. K-12 substr. MG1655 pyridoxine 5'-phosphate oxidase NP_416155.1 1717351 R 511145 CDS NP_416156.4 90111309 946811 complement(1718066..1718395) 1 NC_000913.3 inhibitor of c-type lysozyme, membrane-bound; putative lipoprotein 1718395 mliC 946811 mliC Escherichia coli str. K-12 substr. MG1655 inhibitor of c-type lysozyme, membrane-bound; putative lipoprotein NP_416156.4 1718066 R 511145 CDS NP_416157.1 16129598 946810 complement(1718493..1719602) 1 NC_000913.3 anhydro-N-acetylmuramic acid kinase 1719602 anmK 946810 anmK Escherichia coli str. K-12 substr. MG1655 anhydro-N-acetylmuramic acid kinase NP_416157.1 1718493 R 511145 CDS YP_025304.1 49176129 946801 1719876..1720343 1 NC_000913.3 putative outer membrane protein; outer membrane lipoprotein 1720343 slyB 946801 slyB Escherichia coli str. K-12 substr. MG1655 outer membrane lipoprotein YP_025304.1 1719876 D 511145 CDS NP_416159.2 90111310 946167 complement(1720390..1720824) 1 NC_000913.3 transcriptional regulator for cryptic hemolysin; global transcriptional regulator 1720824 slyA 946167 slyA Escherichia coli str. K-12 substr. MG1655 global transcriptional regulator NP_416159.2 1720390 R 511145 CDS NP_416160.1 16129601 947559 1721025..1721261 1 NC_000913.3 DUF1656 family putative inner membrane efflux pump associated protein 1721261 ydhI 947559 ydhI Escherichia coli str. K-12 substr. MG1655 DUF1656 family putative inner membrane efflux pump associated protein NP_416160.1 1721025 D 511145 CDS NP_416161.4 90111311 946499 1721264..1722121 1 NC_000913.3 putative membrane protein; putative membrane fusion protein (MFP) of YdhJK efflux pump 1722121 ydhJ 946499 ydhJ Escherichia coli str. K-12 substr. MG1655 putative membrane fusion protein (MFP) of YdhJK efflux pump NP_416161.4 1721264 D 511145 CDS NP_416162.1 16129603 946528 1722121..1724133 1 NC_000913.3 putative efflux protein (PET) component of YdhJK efflux pump 1724133 ydhK 946528 ydhK Escherichia coli str. K-12 substr. MG1655 putative efflux protein (PET) component of YdhJK efflux pump NP_416162.1 1722121 D 511145 CDS NP_416163.1 16129604 945343 complement(1724134..1724655) 1 NC_000913.3 superoxide dismutase precursor (Cu-Zn); superoxide dismutase, Cu, Zn, periplasmic 1724655 sodC 945343 sodC Escherichia coli str. K-12 substr. MG1655 superoxide dismutase, Cu, Zn, periplasmic NP_416163.1 1724134 R 511145 CDS YP_025305.1 49176131 946960 complement(1724736..1725632) 1 NC_000913.3 putative oxidoreductase 1725632 ydhF 946960 ydhF Escherichia coli str. K-12 substr. MG1655 putative oxidoreductase YP_025305.1 1724736 R 511145 CDS NP_416165.2 90111312 946168 complement(1725681..1725920) 1 NC_000913.3 DUF1289 family protein 1725920 ydhL 946168 ydhL Escherichia coli str. K-12 substr. MG1655 DUF1289 family protein NP_416165.2 1725681 R 511145 CDS NP_416166.3 145698269 946166 1726023..1726622 1 NC_000913.3 transcriptional repressor for the nemRA-gloA operon, quinone-, glyoxal-, and HOCl-activated 1726622 nemR 946166 nemR Escherichia coli str. K-12 substr. MG1655 transcriptional repressor for the nemRA-gloA operon, quinone-, glyoxal-, and HOCl-activated NP_416166.3 1726023 D 511145 CDS NP_416167.1 16129608 946164 1726659..1727756 1 NC_000913.3 N-ethylmaleimide reductase; chromate reductase, quinone reductase, FMN-linked; N-Ethylmaleimide reductase; old yellow enzyme 1727756 nemA 946164 nemA Escherichia coli str. K-12 substr. MG1655 chromate reductase, quinone reductase, FMN-linked; N-Ethylmaleimide reductase; old yellow enzyme NP_416167.1 1726659 D 511145 CDS NP_416168.1 16129609 946161 1727837..1728244 1 NC_000913.3 lactoylglutathione lyase; glyoxalase I, Ni-dependent 1728244 gloA 946161 gloA Escherichia coli str. K-12 substr. MG1655 glyoxalase I, Ni-dependent NP_416168.1 1727837 D 511145 CDS NP_416169.1 16129610 946159 1728347..1728994 1 NC_000913.3 RNase T, degrades tRNA; ribonuclease T (RNase T) 1728994 rnt 946159 rnt Escherichia coli str. K-12 substr. MG1655 ribonuclease T (RNase T) NP_416169.1 1728347 D 511145 CDS NP_416170.1 16129611 946156 1729087..1733703 1 NC_000913.3 member of ATP-dependent helicase superfamily II; putative ATP-dependent helicase 1733703 lhr 946156 lhr Escherichia coli str. K-12 substr. MG1655 putative ATP-dependent helicase NP_416170.1 1729087 D 511145 CDS NP_416171.1 16129612 946169 complement(1733754..1734101) 1 NC_000913.3 glutaredoxin-4 1734101 grxD 946169 grxD Escherichia coli str. K-12 substr. MG1655 glutaredoxin-4 NP_416171.1 1733754 R 511145 CDS NP_416172.1 16129613 945210 1734435..1735250 1 NC_000913.3 putative lipoprotein; murein DD-endopeptidase, space-maker hydrolase 1735250 mepH 945210 mepH Escherichia coli str. K-12 substr. MG1655 murein DD-endopeptidase, space-maker hydrolase NP_416172.1 1734435 D 511145 CDS NP_416173.1 16129614 944953 1735378..1735959 1 NC_000913.3 superoxide dismutase, iron; superoxide dismutase, Fe 1735959 sodB 944953 sodB Escherichia coli str. K-12 substr. MG1655 superoxide dismutase, Fe NP_416173.1 1735378 D 511145 CDS NP_416174.1 16129615 947340 complement(1736121..1737290) 1 NC_000913.3 putative transport protein; putative transporter 1737290 ydhP 947340 ydhP Escherichia coli str. K-12 substr. MG1655 putative transporter NP_416174.1 1736121 R 511145 CDS YP_001165321.1 145698270 5061505 complement(1737456..1737545) 1 NC_000913.3 stress response membrane 1737545 ynhF 5061505 ynhF Escherichia coli str. K-12 substr. MG1655 stress response membrane YP_001165321.1 1737456 R 511145 CDS NP_416175.1 16129616 945226 1737844..1738869 1 NC_000913.3 transcriptional repressor for pur regulon, glyA, glnB, prsA, speA; transcriptional repressor, hypoxanthine-binding 1738869 purR 945226 purR Escherichia coli str. K-12 substr. MG1655 transcriptional repressor, hypoxanthine-binding NP_416175.1 1737844 D 511145 CDS NP_416176.1 16129617 945208 complement(1738866..1739798) 1 NC_000913.3 putative transcriptional regulator LYSR-type; LysR family putative transcriptional regulator 1739798 ydhB 945208 ydhB Escherichia coli str. K-12 substr. MG1655 LysR family putative transcriptional regulator NP_416176.1 1738866 R 511145 CDS YP_025306.1 49176132 946077 1739911..1741122 1 NC_000913.3 putative transport protein; putative arabinose efflux transporter 1741122 ydhC 946077 ydhC Escherichia coli str. K-12 substr. MG1655 putative arabinose efflux transporter YP_025306.1 1739911 D 511145 CDS NP_416178.1 16129619 944811 1741413..1742561 1 NC_000913.3 cyclopropane fatty acyl phospholipid synthase; cyclopropane fatty acyl phospholipid synthase (unsaturated-phospholipid methyltransferase) 1742561 cfa 944811 cfa Escherichia coli str. K-12 substr. MG1655 cyclopropane fatty acyl phospholipid synthase (unsaturated-phospholipid methyltransferase) NP_416178.1 1741413 D 511145 CDS NP_416179.1 16129620 945848 complement(1742601..1743242) 1 NC_000913.3 riboflavin synthase, alpha chain; riboflavin synthase, alpha subunit 1743242 ribC 945848 ribC Escherichia coli str. K-12 substr. MG1655 riboflavin synthase, alpha subunit NP_416179.1 1742601 R 511145 CDS YP_025307.1 49176133 945883 1743457..1744830 1 NC_000913.3 multidrug resistance protein norM (Na(+)/drug antiporter) (Multidrug-efflux transporter); multidrug efflux system transporter 1744830 mdtK 945883 mdtK Escherichia coli str. K-12 substr. MG1655 multidrug efflux system transporter YP_025307.1 1743457 D 511145 CDS NP_416181.1 16129622 944851 complement(1744871..1746127) 1 NC_000913.3 possible enzyme; autotransporter adhesin-related protein 1746127 ydhQ 944851 ydhQ Escherichia coli str. K-12 substr. MG1655 autotransporter adhesin-related protein NP_416181.1 1744871 R 511145 CDS NP_416182.1 16129623 946177 1746700..1747005 1 NC_000913.3 putative monooxygenase 1747005 ydhR 946177 ydhR Escherichia coli str. K-12 substr. MG1655 putative monooxygenase NP_416182.1 1746700 D 511145 CDS NP_416183.1 16129624 945786 1747131..1748735 1 NC_000913.3 putative oxidoreductase 1748735 ydhS 945786 ydhS Escherichia coli str. K-12 substr. MG1655 putative oxidoreductase NP_416183.1 1747131 D 511145 CDS NP_416184.1 16129625 945960 complement(1748747..1749559) 1 NC_000913.3 FNR, Nar, NarP-regulated protein; putative subunit of YdhYVWXUT oxidoreductase complex 1749559 ydhT 945960 ydhT Escherichia coli str. K-12 substr. MG1655 FNR, Nar, NarP-regulated protein; putative subunit of YdhYVWXUT oxidoreductase complex NP_416184.1 1748747 R 511145 CDS NP_416185.1 16129626 945608 complement(1749563..1750348) 1 NC_000913.3 putative cytochrome b subunit of YdhYVWXUT oxidoreductase complex 1750348 ydhU 945608 ydhU Escherichia coli str. K-12 substr. MG1655 putative cytochrome b subunit of YdhYVWXUT oxidoreductase complex NP_416185.1 1749563 R 511145 CDS NP_416186.4 226524717 947308 complement(1750345..1751013) 1 NC_000913.3 putative oxidoreductase, Fe-S subunit; putative 4Fe-4S ferridoxin-type protein; FNR, Nar, NarP-regulated protein; putative subunit of YdhYVWXUT oxidoreductase complex 1751013 ydhX 947308 ydhX Escherichia coli str. K-12 substr. MG1655 putative 4Fe-4S ferridoxin-type protein; FNR, Nar, NarP-regulated protein; putative subunit of YdhYVWXUT oxidoreductase complex NP_416186.4 1750345 R 511145 CDS NP_416187.1 16129628 947180 complement(1751077..1751724) 1 NC_000913.3 FNR, Nar, NarP-regulated protein; putative subunit of YdhYVWXUT oxidoreductase complex 1751724 ydhW 947180 ydhW Escherichia coli str. K-12 substr. MG1655 FNR, Nar, NarP-regulated protein; putative subunit of YdhYVWXUT oxidoreductase complex NP_416187.1 1751077 R 511145 CDS NP_416188.1 16129629 948756 complement(1751728..1753830) 1 NC_000913.3 putative oxidoreductase subunit 1753830 ydhV 948756 ydhV Escherichia coli str. K-12 substr. MG1655 putative oxidoreductase subunit NP_416188.1 1751728 R 511145 CDS NP_416189.1 16129630 948749 complement(1753851..1754477) 1 NC_000913.3 putative oxidoreductase, Fe-S subunit; putative 4Fe-4S ferridoxin-type protein; FNR, Nar, NarP-regulated protein; putative subunit of YdhYVWXUT oxidoreductase complex 1754477 ydhY 948749 ydhY Escherichia coli str. K-12 substr. MG1655 putative 4Fe-4S ferridoxin-type protein; FNR, Nar, NarP-regulated protein; putative subunit of YdhYVWXUT oxidoreductase complex NP_416189.1 1753851 R 511145 CDS NP_416190.1 16129631 946180 complement(1754932..1755141) 1 NC_000913.3 uncharacterized protein 1755141 ydhZ 946180 ydhZ Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_416190.1 1754932 R 511145 CDS NP_416191.1 16129632 946179 1755698..1757110 1 NC_000913.3 pyruvate kinase I (formerly F), fructose stimulated; pyruvate kinase I 1757110 pykF 946179 pykF Escherichia coli str. K-12 substr. MG1655 pyruvate kinase I NP_416191.1 1755698 D 511145 CDS NP_416192.1 16129633 946175 1757421..1757657 1 NC_000913.3 murein lipoprotein 1757657 lpp 946175 lpp Escherichia coli str. K-12 substr. MG1655 murein lipoprotein NP_416192.1 1757421 D 511145 CDS NP_416193.1 16129634 946174 complement(1757721..1758725) 1 NC_000913.3 murein L,D-transpeptidase 1758725 ldtE 946174 ldtE Escherichia coli str. K-12 substr. MG1655 murein L,D-transpeptidase NP_416193.1 1757721 R 511145 CDS NP_416194.1 16129635 946173 complement(1758874..1759290) 1 NC_000913.3 sulfur acceptor protein 1759290 sufE 946173 sufE Escherichia coli str. K-12 substr. MG1655 sulfur acceptor protein NP_416194.1 1758874 R 511145 CDS NP_416195.1 16129636 946185 complement(1759303..1760523) 1 NC_000913.3 cysteine desulfurase, stimulated by SufE; selenocysteine lyase, PLP-dependent 1760523 sufS 946185 sufS Escherichia coli str. K-12 substr. MG1655 cysteine desulfurase, stimulated by SufE; selenocysteine lyase, PLP-dependent NP_416195.1 1759303 R 511145 CDS NP_416196.1 16129637 944878 complement(1760520..1761791) 1 NC_000913.3 component of SufBCD Fe-S cluster assembly scaffold 1761791 sufD 944878 sufD Escherichia coli str. K-12 substr. MG1655 component of SufBCD Fe-S cluster assembly scaffold NP_416196.1 1760520 R 511145 CDS NP_416197.1 16129638 946128 complement(1761766..1762512) 1 NC_000913.3 putative ATP-binding component of a transport system; SufBCD Fe-S cluster assembly scaffold protein, ATP-binding protein 1762512 sufC 946128 sufC Escherichia coli str. K-12 substr. MG1655 SufBCD Fe-S cluster assembly scaffold protein, ATP-binding protein NP_416197.1 1761766 R 511145 CDS NP_416198.2 90111315 945753 complement(1762522..1764009) 1 NC_000913.3 component of SufBCD Fe-S cluster assembly scaffold 1764009 sufB 945753 sufB Escherichia coli str. K-12 substr. MG1655 component of SufBCD Fe-S cluster assembly scaffold NP_416198.2 1762522 R 511145 CDS NP_416199.1 16129640 949014 complement(1764018..1764386) 1 NC_000913.3 Fe-S cluster assembly protein 1764386 sufA 949014 sufA Escherichia coli str. K-12 substr. MG1655 Fe-S cluster assembly protein NP_416199.1 1764018 R 511145 CDS NP_416200.2 226524718 946194 complement(1764934..1765122) 1 NC_000913.3 uncharacterized protein 1765122 ydiH 946194 ydiH Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_416200.2 1764934 R 511145 CDS NP_416201.1 16129642 946190 complement(1765222..1765632) 1 NC_000913.3 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 1765632 menI 946190 menI Escherichia coli str. K-12 substr. MG1655 1,4-dihydroxy-2-naphthoyl-CoA hydrolase NP_416201.1 1765222 R 511145 CDS NP_416202.1 16129643 946189 complement(1765629..1768685) 1 NC_000913.3 putative oxidase; putative FAD-linked oxidoreductase 1768685 ydiJ 946189 ydiJ Escherichia coli str. K-12 substr. MG1655 putative FAD-linked oxidoreductase NP_416202.1 1765629 R 511145 CDS NP_416203.1 16129644 946183 1769074..1770186 1 NC_000913.3 UPF0118 family inner membrane protein 1770186 ydiK 946183 ydiK Escherichia coli str. K-12 substr. MG1655 UPF0118 family inner membrane protein NP_416203.1 1769074 D 511145 CDS NP_416204.2 90111316 946181 1770615..1770971 1 NC_000913.3 putative HTH domain DNA-binding protein 1770971 ydiL 946181 ydiL Escherichia coli str. K-12 substr. MG1655 putative HTH domain DNA-binding protein NP_416204.2 1770615 D 511145 CDS NP_416205.1 16129646 946196 1771071..1772285 1 NC_000913.3 putative transport system permease protein; MFS superfamily sugar transport 1 family protein 1772285 ydiM 946196 ydiM Escherichia coli str. K-12 substr. MG1655 MFS superfamily sugar transport 1 family protein NP_416205.1 1771071 D 511145 CDS NP_416206.6 226524719 946198 1772512..1773777 1 NC_000913.3 putative amino acid/amine transport protein; MFS transporter superfamily protein 1773777 ydiN 946198 ydiN Escherichia coli str. K-12 substr. MG1655 MFS transporter superfamily protein NP_416206.6 1772512 D 511145 CDS NP_416207.1 16129648 946200 1773789..1774655 1 NC_000913.3 putative oxidoreductase; quinate/shikimate 5-dehydrogenase, NAD(P)-binding 1774655 ydiB 946200 ydiB Escherichia coli str. K-12 substr. MG1655 quinate/shikimate 5-dehydrogenase, NAD(P)-binding NP_416207.1 1773789 D 511145 CDS NP_416208.1 16129649 946210 1774686..1775444 1 NC_000913.3 3-dehydroquinate dehydratase 1775444 aroD 946210 aroD Escherichia coli str. K-12 substr. MG1655 3-dehydroquinate dehydratase NP_416208.1 1774686 D 511145 CDS NP_416209.1 16129650 946211 1775587..1777182 1 NC_000913.3 putative enzyme; putative acetyl-CoA:acetoacetyl-CoA transferase: alpha subunit/beta subunit 1777182 ydiF 946211 ydiF Escherichia coli str. K-12 substr. MG1655 putative acetyl-CoA:acetoacetyl-CoA transferase: alpha subunit/beta subunit NP_416209.1 1775587 D 511145 CDS NP_416210.4 90111318 945626 1777196..1778347 1 NC_000913.3 putative oxidoreductase; putative acyl-CoA dehydrogenase 1778347 ydiO 945626 ydiO Escherichia coli str. K-12 substr. MG1655 putative acyl-CoA dehydrogenase NP_416210.4 1777196 D 511145 CDS NP_416211.1 16129652 945095 complement(1778390..1779301) 1 NC_000913.3 putative ARAC-type regulatory protein; putative DNA-binding transcriptional regulator 1779301 ydiP 945095 ydiP Escherichia coli str. K-12 substr. MG1655 putative DNA-binding transcriptional regulator NP_416211.1 1778390 R 511145 CDS NP_416212.1 16129653 946482 1779617..1780381 1 NC_000913.3 putative transport protein; putative electron transfer flavoprotein subunit 1780381 ydiQ 946482 ydiQ Escherichia coli str. K-12 substr. MG1655 putative electron transfer flavoprotein subunit NP_416212.1 1779617 D 511145 CDS NP_416213.1 16129654 945688 1780401..1781339 1 NC_000913.3 putative flavoprotein; putative electron transfer flavoprotein, FAD-binding subunit 1781339 ydiR 945688 ydiR Escherichia coli str. K-12 substr. MG1655 putative electron transfer flavoprotein, FAD-binding subunit NP_416213.1 1780401 D 511145 CDS NP_416214.1 16129655 946212 1781395..1782684 1 NC_000913.3 flavoprotein; probably electron transport; putative oxidoreductase 1782684 ydiS 946212 ydiS Escherichia coli str. K-12 substr. MG1655 putative oxidoreductase NP_416214.1 1781395 D 511145 CDS NP_416215.1 16129656 946214 1782681..1782974 1 NC_000913.3 putative 3Fe-4S ferredoxin-type protein 1782974 ydiT 946214 ydiT Escherichia coli str. K-12 substr. MG1655 putative 3Fe-4S ferredoxin-type protein NP_416215.1 1782681 D 511145 CDS NP_416216.4 145698273 946213 1783031..1784677 1 NC_000913.3 putative ligase/synthetase; short chain acyl-CoA synthetase, anaerobic 1784677 fadK 946213 fadK Escherichia coli str. K-12 substr. MG1655 short chain acyl-CoA synthetase, anaerobic NP_416216.4 1783031 D 511145 CDS NP_416217.1 16129658 946209 complement(1784734..1787112) 1 NC_000913.3 phosphoenolpyruvate synthase 1787112 ppsA 946209 ppsA Escherichia coli str. K-12 substr. MG1655 phosphoenolpyruvate synthase NP_416217.1 1784734 R 511145 CDS NP_416218.1 16129659 946207 1787445..1788278 1 NC_000913.3 bifunctional regulatory protein: PEP synthase kinase and PEP synthase pyrophosphorylase 1788278 ppsR 946207 ppsR Escherichia coli str. K-12 substr. MG1655 bifunctional regulatory protein: PEP synthase kinase and PEP synthase pyrophosphorylase NP_416218.1 1787445 D 511145 CDS NP_416219.1 16129660 946229 1788435..1789481 1 NC_000913.3 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase, tryptophan repressible); 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, tryptophan repressible 1789481 aroH 946229 aroH Escherichia coli str. K-12 substr. MG1655 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, tryptophan repressible NP_416219.1 1788435 D 511145 CDS NP_416220.1 16129661 946205 1789613..1789804 1 NC_000913.3 hemin uptake protein HemP homolog 1789804 ydiE 946205 ydiE Escherichia coli str. K-12 substr. MG1655 hemin uptake protein HemP homolog NP_416220.1 1789613 D 511145 CDS NP_416221.1 16129662 946219 complement(1789808..1791244) 1 NC_000913.3 UPF0061 family protein 1791244 ydiU 946219 ydiU Escherichia coli str. K-12 substr. MG1655 UPF0061 family protein NP_416221.1 1789808 R 511145 CDS NP_416222.1 16129663 946217 complement(1791307..1792020) 1 NC_000913.3 anti-FlhD4C2 factor, inactive EAL family phosphodiesterase 1792020 ydiV 946217 ydiV Escherichia coli str. K-12 substr. MG1655 anti-FlhD4C2 factor, inactive EAL family phosphodiesterase NP_416222.1 1791307 R 511145 CDS NP_416223.1 16129664 946220 complement(1792267..1792731) 1 NC_000913.3 lipoprotein; putative C40 clan peptidase lipoprotein 1792731 nlpC 946220 nlpC Escherichia coli str. K-12 substr. MG1655 putative C40 clan peptidase lipoprotein NP_416223.1 1792267 R 511145 CDS NP_416224.1 16129665 945751 complement(1792809..1793558) 1 NC_000913.3 ATP-binding component of vitamin B12 transport system; vitamin B12 transporter subunit : ATP-binding component of ABC superfamily 1793558 btuD 945751 btuD Escherichia coli str. K-12 substr. MG1655 vitamin B12 transporter subunit : ATP-binding component of ABC superfamily NP_416224.1 1792809 R 511145 CDS NP_416225.1 16129666 945915 complement(1793558..1794109) 1 NC_000913.3 vitamin B12 transport; glutathione peroxidase 1794109 btuE 945915 btuE Escherichia coli str. K-12 substr. MG1655 glutathione peroxidase NP_416225.1 1793558 R 511145 CDS NP_416226.1 16129667 945877 complement(1794172..1795152) 1 NC_000913.3 vitamin B12 transport permease protein; vitamin B12 transporter subunit: membrane component of ABC superfamily 1795152 btuC 945877 btuC Escherichia coli str. K-12 substr. MG1655 vitamin B12 transporter subunit: membrane component of ABC superfamily NP_416226.1 1794172 R 511145 CDS NP_416227.1 16129668 945472 complement(1795253..1795552) 1 NC_000913.3 integration host factor (IHF), alpha subunit; site specific recombination; integration host factor (IHF), DNA-binding protein, alpha subunit 1795552 ihfA 945472 ihfA Escherichia coli str. K-12 substr. MG1655 integration host factor (IHF), DNA-binding protein, alpha subunit NP_416227.1 1795253 R 511145 CDS NP_416228.1 16129669 945382 complement(1795557..1797944) 1 NC_000913.3 phenylalanine tRNA synthetase, beta-subunit; phenylalanine tRNA synthetase, beta subunit 1797944 pheT 945382 pheT Escherichia coli str. K-12 substr. MG1655 phenylalanine tRNA synthetase, beta subunit NP_416228.1 1795557 R 511145 CDS NP_416229.1 16129670 946223 complement(1797959..1798942) 1 NC_000913.3 phenylalanine tRNA synthetase, alpha-subunit; phenylalanine tRNA synthetase, alpha subunit 1798942 pheS 946223 pheS Escherichia coli str. K-12 substr. MG1655 phenylalanine tRNA synthetase, alpha subunit NP_416229.1 1797959 R 511145 CDS NP_416230.1 16129671 947212 complement(1799226..1799270) 1 NC_000913.3 phenylalanyl-tRNA synthetase (pheST) operon leader peptide; phenylalanyl-tRNA synthetase operon leader peptide 1799270 pheM 947212 pheM Escherichia coli str. K-12 substr. MG1655 phenylalanyl-tRNA synthetase operon leader peptide NP_416230.1 1799226 R 511145 CDS NP_416231.1 16129672 945152 complement(1799393..1799749) 1 NC_000913.3 50S ribosomal subunit protein L20, and regulator; 50S ribosomal subunit protein L20 1799749 rplT 945152 rplT Escherichia coli str. K-12 substr. MG1655 50S ribosomal subunit protein L20 NP_416231.1 1799393 R 511145 CDS NP_416232.3 49176137 946349 complement(1799802..1799999) 1 NC_000913.3 50S ribosomal subunit protein A; 50S ribosomal subunit protein L35 1799999 rpmI 946349 rpmI Escherichia coli str. K-12 substr. MG1655 50S ribosomal subunit protein L35 NP_416232.3 1799802 R 511145 CDS NP_416233.1 16129674 946225 complement(1800096..1800638) 1 NC_000913.3 translation initiation factor IF-3 1800638 infC 946225 infC Escherichia coli str. K-12 substr. MG1655 translation initiation factor IF-3 NP_416233.1 1800096 R 511145 CDS NP_416234.1 16129675 946222 complement(1800642..1802570) 1 NC_000913.3 threonine tRNA synthetase; threonyl-tRNA synthetase 1802570 thrS 946222 thrS Escherichia coli str. K-12 substr. MG1655 threonyl-tRNA synthetase NP_416234.1 1800642 R 511145 CDS b4494 948935 join(1803094..1803519,1803518..1804993) 1 NC_000913.3 pseudogene, ankyrin repeats; <NULL_VALUE> 1804993 arpB 948935 arpB Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 1803094 D 511145 CDS YP_588455.2 145698274 1450269 1805165..1805272 1 NC_000913.3 uncharacterized protein 1805272 yniD 1450269 yniD Escherichia coli str. K-12 substr. MG1655 uncharacterized protein YP_588455.2 1805165 D 511145 CDS NP_416236.1 16129676 946218 complement(1805325..1806083) 1 NC_000913.3 acid-inducible putative outer membrane protein 1806083 ydiY 946218 ydiY Escherichia coli str. K-12 substr. MG1655 acid-inducible putative outer membrane protein NP_416236.1 1805325 R 511145 CDS NP_416237.3 49176138 946230 1806370..1807299 1 NC_000913.3 6-phosphofructokinase II; suppressor of pfkA; 6-phosphofructokinase II 1807299 pfkB 946230 pfkB Escherichia coli str. K-12 substr. MG1655 6-phosphofructokinase II NP_416237.3 1806370 D 511145 CDS NP_416238.1 16129678 946232 1807400..1807690 1 NC_000913.3 uncharacterized protein 1807690 ydiZ 946232 ydiZ Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_416238.1 1807400 D 511145 CDS NP_416239.1 16129679 946236 1807796..1808656 1 NC_000913.3 fructosamine kinase family protein 1808656 yniA 946236 yniA Escherichia coli str. K-12 substr. MG1655 fructosamine kinase family protein NP_416239.1 1807796 D 511145 CDS NP_416240.1 16129680 945140 complement(1808697..1809233) 1 NC_000913.3 putative inner membrane protein 1809233 yniB 945140 yniB Escherichia coli str. K-12 substr. MG1655 putative inner membrane protein NP_416240.1 1808697 R 511145 CDS NP_416241.1 16129681 945632 1809380..1810048 1 NC_000913.3 putative phosphatase; 2-deoxyglucose-6-P phosphatase 1810048 yniC 945632 yniC Escherichia coli str. K-12 substr. MG1655 2-deoxyglucose-6-P phosphatase NP_416241.1 1809380 D 511145 CDS NP_416242.6 226524720 945644 1810211..1810801 1 NC_000913.3 inner membrane protein regulated by LexA 1810801 ydjM 945644 ydjM Escherichia coli str. K-12 substr. MG1655 inner membrane protein regulated by LexA NP_416242.6 1810211 D 511145 CDS NP_416243.1 16129683 946238 1810934..1812325 1 NC_000913.3 putative transporter 1812325 ydjN 946238 ydjN Escherichia coli str. K-12 substr. MG1655 putative transporter NP_416243.1 1810934 D 511145 CDS NP_416244.2 226524721 946237 complement(1812329..1813132) 1 NC_000913.3 uncharacterized protein 1813132 ydjO 946237 ydjO Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_416244.2 1812329 R 511145 CDS NP_416245.2 145698276 946235 complement(1813421..1813663) 1 NC_000913.3 cell division modulator 1813663 cedA 946235 cedA Escherichia coli str. K-12 substr. MG1655 cell division modulator NP_416245.2 1813421 R 511145 CDS YP_025308.1 49176140 946234 1813867..1816128 1 NC_000913.3 catalase; hydroperoxidase HPII(III); catalase HPII, heme d-containing 1816128 katE 946234 katE Escherichia coli str. K-12 substr. MG1655 catalase HPII, heme d-containing YP_025308.1 1813867 D 511145 CDS NP_416247.1 16129687 946231 complement(1816386..1817135) 1 NC_000913.3 chito-oligosaccharide deacetylase 1817135 chbG 946231 chbG Escherichia coli str. K-12 substr. MG1655 chito-oligosaccharide deacetylase NP_416247.1 1816386 R 511145 CDS NP_416248.1 16129688 946266 complement(1817148..1818500) 1 NC_000913.3 phospho-chitobiase; general 6-phospho-beta-glucosidase activity 1818500 chbF 946266 chbF Escherichia coli str. K-12 substr. MG1655 phospho-chitobiase; general 6-phospho-beta-glucosidase activity NP_416248.1 1817148 R 511145 CDS NP_416249.1 16129689 946247 complement(1818605..1819447) 1 NC_000913.3 negative transcriptional regulator of cel operon; repressor of chb operon for N,N'-diacetylchitobiose utilization 1819447 chbR 946247 chbR Escherichia coli str. K-12 substr. MG1655 repressor of chb operon for N,N'-diacetylchitobiose utilization NP_416249.1 1818605 R 511145 CDS NP_416250.1 16129690 946244 complement(1819455..1819805) 1 NC_000913.3 PTS family enzyme IIA, cellobiose/arbutin/salicin sugar-specific; N,N'-diacetylchitobiose-specific enzyme IIA component of PTS 1819805 chbA 946244 chbA Escherichia coli str. K-12 substr. MG1655 N,N'-diacetylchitobiose-specific enzyme IIA component of PTS NP_416250.1 1819455 R 511145 CDS NP_416251.1 16129691 945982 complement(1819856..1821214) 1 NC_000913.3 PEP-dependent phosphotransferase enzyme II for cellobiose, arbutin, and salicin; N,N'-diacetylchitobiose-specific enzyme IIC component of PTS 1821214 chbC 945982 chbC Escherichia coli str. K-12 substr. MG1655 N,N'-diacetylchitobiose-specific enzyme IIC component of PTS NP_416251.1 1819856 R 511145 CDS NP_416252.1 16129692 945339 complement(1821299..1821619) 1 NC_000913.3 PTS family enzyme IIB, cellobiose/arbutin/salicin sugar-specific; N,N'-diacetylchitobiose-specific enzyme IIB component of PTS 1821619 chbB 945339 chbB Escherichia coli str. K-12 substr. MG1655 N,N'-diacetylchitobiose-specific enzyme IIB component of PTS NP_416252.1 1821299 R 511145 CDS NP_416253.1 16129693 945305 complement(1821918..1822256) 1 NC_000913.3 activator of ntrL gene; osmotically-inducible lipoprotein 1822256 osmE 945305 osmE Escherichia coli str. K-12 substr. MG1655 osmotically-inducible lipoprotein NP_416253.1 1821918 R 511145 CDS NP_416254.1 16129694 946946 1822458..1823285 1 NC_000913.3 NAD synthetase, prefers NH3 over glutamine; NAD synthetase, NH3/glutamine-dependent 1823285 nadE 946946 nadE Escherichia coli str. K-12 substr. MG1655 NAD synthetase, NH3/glutamine-dependent NP_416254.1 1822458 D 511145 CDS NP_416255.1 16129695 948996 1823515..1824402 1 NC_000913.3 putative excinuclease subunit; endonuclease of nucleotide excision repair 1824402 cho 948996 cho Escherichia coli str. K-12 substr. MG1655 endonuclease of nucleotide excision repair NP_416255.1 1823515 D 511145 CDS NP_416256.2 90111320 946245 complement(1824362..1824937) 1 NC_000913.3 cold- and stress-inducible protein 1824937 ves 946245 ves Escherichia coli str. K-12 substr. MG1655 cold- and stress-inducible protein NP_416256.2 1824362 R 511145 CDS NP_416257.1 16129697 946253 complement(1825140..1825625) 1 NC_000913.3 periplasmic protein related to spheroblast formation; periplasmic ATP-independent protein refolding chaperone, stress-induced 1825625 spy 946253 spy Escherichia coli str. K-12 substr. MG1655 periplasmic ATP-independent protein refolding chaperone, stress-induced NP_416257.1 1825140 R 511145 CDS NP_416258.1 16129698 946256 complement(1825955..1826923) 1 NC_000913.3 succinylglutamate desuccinylase 1826923 astE 946256 astE Escherichia coli str. K-12 substr. MG1655 succinylglutamate desuccinylase NP_416258.1 1825955 R 511145 CDS NP_416259.1 16129699 946259 complement(1826916..1828259) 1 NC_000913.3 succinylarginine dihydrolase 1828259 astB 946259 astB Escherichia coli str. K-12 substr. MG1655 succinylarginine dihydrolase NP_416259.1 1826916 R 511145 CDS NP_416260.1 16129700 946260 complement(1828256..1829734) 1 NC_000913.3 succinylglutamic semialdehyde dehydrogenase 1829734 astD 946260 astD Escherichia coli str. K-12 substr. MG1655 succinylglutamic semialdehyde dehydrogenase NP_416260.1 1828256 R 511145 CDS NP_416261.1 16129701 946261 complement(1829731..1830765) 1 NC_000913.3 arginine succinyltransferase 1830765 astA 946261 astA Escherichia coli str. K-12 substr. MG1655 arginine succinyltransferase NP_416261.1 1829731 R 511145 CDS NP_416262.1 16129702 946255 complement(1830762..1831982) 1 NC_000913.3 acetylornithine delta-aminotransferase; succinylornithine transaminase, PLP-dependent 1831982 astC 946255 astC Escherichia coli str. K-12 substr. MG1655 succinylornithine transaminase, PLP-dependent NP_416262.1 1830762 R 511145 CDS NP_416263.1 16129703 946254 1832428..1833234 1 NC_000913.3 exonuclease III 1833234 xthA 946254 xthA Escherichia coli str. K-12 substr. MG1655 exonuclease III NP_416263.1 1832428 D 511145 CDS NP_416264.4 90111321 946250 1833401..1834111 1 NC_000913.3 TVP38/TMEM64 family inner membrane protein 1834111 ydjX 946250 ydjX Escherichia coli str. K-12 substr. MG1655 TVP38/TMEM64 family inner membrane protein NP_416264.4 1833401 D 511145 CDS NP_416265.4 90111322 946248 1834116..1834793 1 NC_000913.3 putative ferrodoxin-like lipoprotein 1834793 ydjY 946248 ydjY Escherichia coli str. K-12 substr. MG1655 putative ferrodoxin-like lipoprotein NP_416265.4 1834116 D 511145 CDS NP_416266.1 16129706 946269 1834808..1835515 1 NC_000913.3 TVP38/TMEM64 family inner membrane protein 1835515 ydjZ 946269 ydjZ Escherichia coli str. K-12 substr. MG1655 TVP38/TMEM64 family inner membrane protein NP_416266.1 1834808 D 511145 CDS NP_416267.1 16129707 946270 1835515..1836063 1 NC_000913.3 carboxymuconolactone decarboxylase family protein 1836063 ynjA 946270 ynjA Escherichia coli str. K-12 substr. MG1655 carboxymuconolactone decarboxylase family protein NP_416267.1 1835515 D 511145 CDS NP_416268.2 90111323 946271 1836073..1837239 1 NC_000913.3 putative ABC superfamily transporter periplasmic-binding protein 1837239 ynjB 946271 ynjB Escherichia coli str. K-12 substr. MG1655 putative ABC superfamily transporter periplasmic-binding protein NP_416268.2 1836073 D 511145 CDS NP_416269.4 145698277 946273 1837212..1838747 1 NC_000913.3 putative transport system permease protein; inner membrane putative ABC superfamily transporter permease 1838747 ynjC 946273 ynjC Escherichia coli str. K-12 substr. MG1655 inner membrane putative ABC superfamily transporter permease NP_416269.4 1837212 D 511145 CDS NP_416270.1 16129710 944965 1838747..1839400 1 NC_000913.3 putative ATP-binding component of a transport system; putative ABC superfamily transporter ATP-binding subunit 1839400 ynjD 944965 ynjD Escherichia coli str. K-12 substr. MG1655 putative ABC superfamily transporter ATP-binding subunit NP_416270.1 1838747 D 511145 CDS NP_416271.4 90111324 946505 1839467..1840774 1 NC_000913.3 putative thiosulfate sulfur transferase; molybdopterin synthase sulfurtransferase 1840774 ynjE 946505 ynjE Escherichia coli str. K-12 substr. MG1655 molybdopterin synthase sulfurtransferase NP_416271.4 1839467 D 511145 CDS NP_416272.2 90111325 946221 complement(1840783..1841403) 1 NC_000913.3 putative cytochrome oxidase; inner membrane protein, phosphatidylglycerophosphate synthase homolog 1841403 ynjF 946221 ynjF Escherichia coli str. K-12 substr. MG1655 inner membrane protein, phosphatidylglycerophosphate synthase homolog NP_416272.2 1840783 R 511145 CDS NP_416273.1 16129713 946277 1841490..1841897 1 NC_000913.3 5-hydroxy-CTP pyrophosphohydrolase; CTP pyrophosphohydrolase; also hydrolyzes 2-hydroxy-dATP, 8-hydroxy-dGTP, 5-hydroxy-CTP, dCTP and 5-methyl-dCTP 1841897 nudG 946277 nudG Escherichia coli str. K-12 substr. MG1655 CTP pyrophosphohydrolase; also hydrolyzes 2-hydroxy-dATP, 8-hydroxy-dGTP, 5-hydroxy-CTP, dCTP and 5-methyl-dCTP NP_416273.1 1841490 D 511145 CDS NP_416274.1 16129714 946279 complement(1841863..1842135) 1 NC_000913.3 DUF1496 family protein 1842135 ynjH 946279 ynjH Escherichia coli str. K-12 substr. MG1655 DUF1496 family protein NP_416274.1 1841863 R 511145 CDS NP_416275.1 16129715 946802 1842371..1843714 1 NC_000913.3 NADP-specific glutamate dehydrogenase; glutamate dehydrogenase, NADP-specific 1843714 gdhA 946802 gdhA Escherichia coli str. K-12 substr. MG1655 glutamate dehydrogenase, NADP-specific NP_416275.1 1842371 D 511145 CDS NP_416276.4 90111326 946239 complement(1843831..1844871) 1 NC_000913.3 inner membrane protein 1844871 ynjI 946239 ynjI Escherichia coli str. K-12 substr. MG1655 inner membrane protein NP_416276.4 1843831 R 511145 CDS NP_416277.1 16129717 946141 complement(1844999..1846960) 1 NC_000913.3 DNA topoisomerase III 1846960 topB 946141 topB Escherichia coli str. K-12 substr. MG1655 DNA topoisomerase III NP_416277.1 1844999 R 511145 CDS NP_416278.1 16129718 946768 complement(1846965..1848008) 1 NC_000913.3 selenophosphate synthase, H(2)Se added to acrylyl-tRNA; selenophosphate synthase 1848008 selD 946768 selD Escherichia coli str. K-12 substr. MG1655 selenophosphate synthase NP_416278.1 1846965 R 511145 CDS NP_416279.1 16129719 945964 complement(1848125..1848676) 1 NC_000913.3 putative oxidoreductase 1848676 ydjA 945964 ydjA Escherichia coli str. K-12 substr. MG1655 putative oxidoreductase NP_416279.1 1848125 R 511145 CDS NP_416280.1 16129720 946281 1848837..1850693 1 NC_000913.3 protease IV, a signal peptide peptidase; protease IV (signal peptide peptidase) 1850693 sppA 946281 sppA Escherichia coli str. K-12 substr. MG1655 protease IV (signal peptide peptidase) NP_416280.1 1848837 D 511145 CDS NP_416281.1 16129721 946278 1850860..1851876 1 NC_000913.3 cytoplasmic L-asparaginase 1 1851876 ansA 946278 ansA Escherichia coli str. K-12 substr. MG1655 cytoplasmic L-asparaginase 1 NP_416281.1 1850860 D 511145 CDS NP_416282.4 90111327 946276 1851887..1852528 1 NC_000913.3 nicotinamidase/pyrazinamidase 1852528 pncA 946276 pncA Escherichia coli str. K-12 substr. MG1655 nicotinamidase/pyrazinamidase NP_416282.4 1851887 D 511145 CDS NP_416283.1 16129723 946274 complement(1852621..1853979) 1 NC_000913.3 putative transport protein; putative transporter 1853979 ydjE 946274 ydjE Escherichia coli str. K-12 substr. MG1655 putative transporter NP_416283.1 1852621 R 511145 CDS NP_416284.1 16129724 946272 complement(1854096..1854854) 1 NC_000913.3 putative DEOR-type transcriptional regulator; putative DNA-binding transcriptional regulator 1854854 ydjF 946272 ydjF Escherichia coli str. K-12 substr. MG1655 putative DNA-binding transcriptional regulator NP_416284.1 1854096 R 511145 CDS NP_416285.1 16129725 946283 complement(1854991..1855971) 1 NC_000913.3 alpha-Keto reductase, NADH-dependent; can use methylglyoxal as substrate 1855971 ydjG 946283 ydjG Escherichia coli str. K-12 substr. MG1655 alpha-Keto reductase, NADH-dependent; can use methylglyoxal as substrate NP_416285.1 1854991 R 511145 CDS NP_416286.4 90111328 946285 complement(1855981..1856928) 1 NC_000913.3 putative kinase 1856928 ydjH 946285 ydjH Escherichia coli str. K-12 substr. MG1655 putative kinase NP_416286.4 1855981 R 511145 CDS NP_416287.1 16129727 946291 complement(1856933..1857769) 1 NC_000913.3 putative aldolase 1857769 ydjI 946291 ydjI Escherichia coli str. K-12 substr. MG1655 putative aldolase NP_416287.1 1856933 R 511145 CDS NP_416288.1 16129728 946292 complement(1857790..1858833) 1 NC_000913.3 putative oxidoreductase; putative Zn-dependent NAD(P)-binding oxidoreductase 1858833 ydjJ 946292 ydjJ Escherichia coli str. K-12 substr. MG1655 putative Zn-dependent NAD(P)-binding oxidoreductase NP_416288.1 1857790 R 511145 CDS NP_416289.1 16129729 946293 complement(1858850..1860229) 1 NC_000913.3 putative transport protein; putative transporter 1860229 ydjK 946293 ydjK Escherichia coli str. K-12 substr. MG1655 putative transporter NP_416289.1 1858850 R 511145 CDS NP_416290.1 16129730 946299 complement(1860256..1861332) 1 NC_000913.3 putative Zn-dependent NAD(P)-binding oxidoreductase 1861332 ydjL 946299 ydjL Escherichia coli str. K-12 substr. MG1655 putative Zn-dependent NAD(P)-binding oxidoreductase NP_416290.1 1860256 R 511145 CDS NP_416291.4 90111329 947074 complement(1861702..1861974) 1 NC_000913.3 DUF1315 family protein 1861974 yeaC 947074 yeaC Escherichia coli str. K-12 substr. MG1655 DUF1315 family protein NP_416291.4 1861702 R 511145 CDS NP_416292.1 16129732 947188 complement(1862016..1862429) 1 NC_000913.3 methionine sulfoxide reductase B 1862429 msrB 947188 msrB Escherichia coli str. K-12 substr. MG1655 methionine sulfoxide reductase B NP_416292.1 1862016 R 511145 CDS NP_416293.1 16129733 947679 1862771..1863766 1 NC_000913.3 glyceraldehyde-3-phosphate dehydrogenase A 1863766 gapA 947679 gapA Escherichia coli str. K-12 substr. MG1655 glyceraldehyde-3-phosphate dehydrogenase A NP_416293.1 1862771 D 511145 CDS NP_416294.4 90111330 946572 1863850..1864734 1 NC_000913.3 D-hexose-6-phosphate epimerase-like protein 1864734 yeaD 946572 yeaD Escherichia coli str. K-12 substr. MG1655 D-hexose-6-phosphate epimerase-like protein NP_416294.4 1863850 D 511145 CDS NP_416295.1 16129735 946302 complement(1864782..1865636) 1 NC_000913.3 putative an aldehyde reductase; aldo-keto reductase, methylglyoxal to acetol, NADPH-dependent 1865636 yeaE 946302 yeaE Escherichia coli str. K-12 substr. MG1655 aldo-keto reductase, methylglyoxal to acetol, NADPH-dependent NP_416295.1 1864782 R 511145 CDS NP_416296.1 16129736 946301 complement(1865726..1866472) 1 NC_000913.3 scaffolding protein for murein synthesizing machinery 1866472 mipA 946301 mipA Escherichia coli str. K-12 substr. MG1655 scaffolding protein for murein synthesizing machinery NP_416296.1 1865726 R 511145 CDS NP_416297.1 16129737 946297 1866908..1868842 1 NC_000913.3 protein kinase, endogenous substrate unidentified; autokinase 1868842 yeaG 946297 yeaG Escherichia coli str. K-12 substr. MG1655 protein kinase, endogenous substrate unidentified; autokinase NP_416297.1 1866908 D 511145 CDS NP_416298.1 16129738 946296 1868955..1870238 1 NC_000913.3 UPF0229 family protein 1870238 yeaH 946296 yeaH Escherichia coli str. K-12 substr. MG1655 UPF0229 family protein NP_416298.1 1868955 D 511145 CDS NP_416299.1 16129739 946366 1870385..1871860 1 NC_000913.3 putative membrane-anchored diguanylate cyclase 1871860 yeaI 946366 yeaI Escherichia coli str. K-12 substr. MG1655 putative membrane-anchored diguanylate cyclase NP_416299.1 1870385 D 511145 CDS NP_416300.2 90111331 946290 1872041..1873531 1 NC_000913.3 putative diguanylate cyclase 1873531 yeaJ 946290 yeaJ Escherichia coli str. K-12 substr. MG1655 putative diguanylate cyclase NP_416300.2 1872041 D 511145 CDS NP_416301.1 16129741 946303 1873574..1874077 1 NC_000913.3 aminoacyl-tRNA editing domain protein 1874077 yeaK 946303 yeaK Escherichia coli str. K-12 substr. MG1655 aminoacyl-tRNA editing domain protein NP_416301.1 1873574 D 511145 CDS NP_416302.2 90111332 946294 complement(1874078..1874182) 1 NC_000913.3 uncharacterized protein 1874182 yoaI 946294 yoaI Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_416302.2 1874078 R 511145 CDS NP_416303.1 16129743 946307 1874352..1874798 1 NC_000913.3 UPF0756 family putative inner membrane protein 1874798 yeaL 946307 yeaL Escherichia coli str. K-12 substr. MG1655 UPF0756 family putative inner membrane protein NP_416303.1 1874352 D 511145 CDS NP_416304.1 16129744 946590 complement(1874755..1875576) 1 NC_000913.3 putative ARAC-type regulatory protein; putative DNA-binding transcriptional regulator 1875576 yeaM 946590 yeaM Escherichia coli str. K-12 substr. MG1655 putative DNA-binding transcriptional regulator NP_416304.1 1874755 R 511145 CDS NP_416305.1 16129745 946309 1875673..1876854 1 NC_000913.3 putative amino acid/amine transport protein; putative transporter 1876854 yeaN 946309 yeaN Escherichia coli str. K-12 substr. MG1655 putative transporter NP_416305.1 1875673 D 511145 CDS NP_416306.2 90111333 945675 1876909..1877256 1 NC_000913.3 DUF488 family protein 1877256 yeaO 945675 yeaO Escherichia coli str. K-12 substr. MG1655 DUF488 family protein NP_416306.2 1876909 D 511145 CDS NP_416307.1 16129747 946310 complement(1877278..1877532) 1 NC_000913.3 DUF333 family outer membrane lipoprotein 1877532 yoaF 946310 yoaF Escherichia coli str. K-12 substr. MG1655 DUF333 family outer membrane lipoprotein NP_416307.1 1877278 R 511145 CDS NP_416308.4 90111334 948969 1877715..1878740 1 NC_000913.3 diguanylate cyclase 1878740 yeaP 948969 yeaP Escherichia coli str. K-12 substr. MG1655 diguanylate cyclase NP_416308.4 1877715 D 511145 CDS YP_002791242.1 226524722 7751647 1878773..1878871 1 NC_000913.3 inner membrane-associated protein 1878871 yoaK 7751647 yoaK Escherichia coli str. K-12 substr. MG1655 inner membrane-associated protein YP_002791242.1 1878773 D 511145 CDS YP_002791243.1 226524723 7751648 1878874..1878948 1 NC_000913.3 inner membrane-associated protein 1878948 yoaJ 7751648 yoaJ Escherichia coli str. K-12 substr. MG1655 inner membrane-associated protein YP_002791243.1 1878874 D 511145 CDS NP_416309.1 16129749 946311 complement(1879007..1879255) 1 NC_000913.3 UPF0410 family protein 1879255 yeaQ 946311 yeaQ Escherichia coli str. K-12 substr. MG1655 UPF0410 family protein NP_416309.1 1879007 R 511145 CDS NP_416310.1 16129750 946314 complement(1879403..1879585) 1 NC_000913.3 uncharacterized protein 1879585 yoaG 946314 yoaG Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_416310.1 1879403 R 511145 CDS NP_416311.1 16129751 946317 complement(1879589..1879948) 1 NC_000913.3 DUF1971 family protein, nitrate-inducible 1879948 yeaR 946317 yeaR Escherichia coli str. K-12 substr. MG1655 DUF1971 family protein, nitrate-inducible NP_416311.1 1879589 R 511145 CDS NP_416312.1 16129752 946157 complement(1880121..1880759) 1 NC_000913.3 leucine efflux protein 1880759 leuE 946157 leuE Escherichia coli str. K-12 substr. MG1655 leucine efflux protein NP_416312.1 1880121 R 511145 CDS NP_416313.4 90111335 946316 complement(1880886..1881809) 1 NC_000913.3 putative transcriptional regulator LYSR-type; transcriptional activator of dmlA 1881809 dmlR 946316 dmlR Escherichia coli str. K-12 substr. MG1655 transcriptional activator of dmlA NP_416313.4 1880886 R 511145 CDS NP_416314.1 16129754 946319 1881912..1882997 1 NC_000913.3 putative tartrate dehydrogenase; D-malate oxidase, NAD-dependent; putative tartrate dehydrogenase 1882997 dmlA 946319 dmlA Escherichia coli str. K-12 substr. MG1655 D-malate oxidase, NAD-dependent; putative tartrate dehydrogenase NP_416314.1 1881912 D 511145 CDS NP_416315.1 16129755 947326 1883188..1884633 1 NC_000913.3 putative transport protein; putative transporter 1884633 yeaV 947326 yeaV Escherichia coli str. K-12 substr. MG1655 putative transporter NP_416315.1 1883188 D 511145 CDS NP_416316.1 16129756 946325 1884665..1885789 1 NC_000913.3 putative YeaWX dioxygenase alpha subunit; 2Fe-2S cluster 1885789 yeaW 946325 yeaW Escherichia coli str. K-12 substr. MG1655 putative YeaWX dioxygenase alpha subunit; 2Fe-2S cluster NP_416316.1 1884665 D 511145 CDS NP_416317.1 16129757 946329 1885845..1886810 1 NC_000913.3 putative diogenase beta subunit; putative YeaWX dioxygenase beta subunit, reductase component 1886810 yeaX 946329 yeaX Escherichia coli str. K-12 substr. MG1655 putative YeaWX dioxygenase beta subunit, reductase component NP_416317.1 1885845 D 511145 CDS NP_416318.1 16129758 946328 complement(1886864..1887991) 1 NC_000913.3 RNase D, processes tRNA precursor; ribonuclease D 1887991 rnd 946328 rnd Escherichia coli str. K-12 substr. MG1655 ribonuclease D NP_416318.1 1886864 R 511145 CDS NP_416319.1 16129759 946327 complement(1888061..1889746) 1 NC_000913.3 acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase) 1889746 fadD 946327 fadD Escherichia coli str. K-12 substr. MG1655 acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase) NP_416319.1 1888061 R 511145 CDS NP_416320.1 16129760 946312 complement(1889951..1890532) 1 NC_000913.3 putative outer membrane protein; Slp family lipoprotein, RpoE-regulated 1890532 yeaY 946312 yeaY Escherichia coli str. K-12 substr. MG1655 Slp family lipoprotein, RpoE-regulated NP_416320.1 1889951 R 511145 CDS NP_416321.1 16129761 946304 complement(1890572..1891267) 1 NC_000913.3 tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein; binding partner and protease for TsaD 1891267 tsaB 946304 tsaB Escherichia coli str. K-12 substr. MG1655 tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein; binding partner and protease for TsaD NP_416321.1 1890572 R 511145 CDS NP_416322.1 16129762 946305 complement(1891325..1893235) 1 NC_000913.3 putative enzyme; putative ATP-dependent helicase, DinG family 1893235 yoaA 946305 yoaA Escherichia coli str. K-12 substr. MG1655 putative ATP-dependent helicase, DinG family NP_416322.1 1891325 R 511145 CDS NP_416323.4 90111336 946357 1893367..1893711 1 NC_000913.3 putative reactive intermediate deaminase 1893711 yoaB 946357 yoaB Escherichia coli str. K-12 substr. MG1655 putative reactive intermediate deaminase NP_416323.4 1893367 D 511145 CDS NP_416324.2 226524724 946308 1894133..1894432 1 NC_000913.3 DUF1889 family protein 1894432 yoaC 946308 yoaC Escherichia coli str. K-12 substr. MG1655 DUF1889 family protein NP_416324.2 1894133 D 511145 CDS NP_416325.1 16129765 946346 complement(1894552..1894731) 1 NC_000913.3 UPF0181 family protein 1894731 yoaH 946346 yoaH Escherichia coli str. K-12 substr. MG1655 UPF0181 family protein NP_416325.1 1894552 R 511145 CDS NP_416326.1 16129766 946337 1894805..1896166 1 NC_000913.3 p-aminobenzoate synthetase, component I; aminodeoxychorismate synthase, subunit I 1896166 pabB 946337 pabB Escherichia coli str. K-12 substr. MG1655 aminodeoxychorismate synthase, subunit I NP_416326.1 1894805 D 511145 CDS NP_416327.1 16129767 946330 1896170..1896748 1 NC_000913.3 putative CoA pyrophosphohydrolase, weak 3-phosphohydroxypyruvate phosphatase 1896748 nudL 946330 nudL Escherichia coli str. K-12 substr. MG1655 putative CoA pyrophosphohydrolase, weak 3-phosphohydroxypyruvate phosphatase NP_416327.1 1896170 D 511145 CDS NP_416328.1 16129768 946331 1896932..1898296 1 NC_000913.3 L-serine deaminase; L-serine dehydratase 1 1898296 sdaA 946331 sdaA Escherichia coli str. K-12 substr. MG1655 L-serine dehydratase 1 NP_416328.1 1896932 D 511145 CDS NP_416329.4 90111337 946336 1898427..1900025 1 NC_000913.3 putative membrane-anchored cyclic-di-GMP phosphodiesterase, regulator of cellulose production 1900025 yoaD 946336 yoaD Escherichia coli str. K-12 substr. MG1655 putative membrane-anchored cyclic-di-GMP phosphodiesterase, regulator of cellulose production NP_416329.4 1898427 D 511145 CDS NP_416330.1 16129770 946335 complement(1900029..1901585) 1 NC_000913.3 putative transport protein; putative membrane protein/conserved protein 1901585 yoaE 946335 yoaE Escherichia coli str. K-12 substr. MG1655 putative membrane protein/conserved protein NP_416330.1 1900029 R 511145 CDS NP_416331.1 16129771 946334 1902048..1903019 1 NC_000913.3 PTS enzyme IIAB, mannose-specific; fused mannose-specific PTS enzymes: IIA component/IIB component 1903019 manX 946334 manX Escherichia coli str. K-12 substr. MG1655 fused mannose-specific PTS enzymes: IIA component/IIB component NP_416331.1 1902048 D 511145 CDS NP_416332.1 16129772 946332 1903082..1903882 1 NC_000913.3 PTS enzyme IIC, mannose-specific; mannose-specific enzyme IIC component of PTS 1903882 manY 946332 manY Escherichia coli str. K-12 substr. MG1655 mannose-specific enzyme IIC component of PTS NP_416332.1 1903082 D 511145 CDS NP_416333.4 345452720 946342 1903895..1904746 1 NC_000913.3 PTS enzyme IID, mannose-specific; mannose-specific enzyme IID component of PTS 1904746 manZ 946342 manZ Escherichia coli str. K-12 substr. MG1655 mannose-specific enzyme IID component of PTS NP_416333.4 1903895 D 511145 CDS NP_416334.1 16129774 946343 1904801..1905259 1 NC_000913.3 UPF0266 family inner membrane protein 1905259 yobD 946343 yobD Escherichia coli str. K-12 substr. MG1655 UPF0266 family inner membrane protein NP_416334.1 1904801 D 511145 CDS NP_416335.4 162135903 946341 1905688..1906254 1 NC_000913.3 putative Mn(2+) efflux pump, mntR-regulated 1906254 mntP 946341 mntP Escherichia coli str. K-12 substr. MG1655 putative Mn(2+) efflux pump, mntR-regulated NP_416335.4 1905688 D 511145 CDS NP_416336.1 16129776 946340 complement(1906251..1907060) 1 NC_000913.3 23S rRNA m(1)G745 methyltransferase, SAM-dependent 1907060 rlmA 946340 rlmA Escherichia coli str. K-12 substr. MG1655 23S rRNA m(1)G745 methyltransferase, SAM-dependent NP_416336.1 1906251 R 511145 CDS NP_416337.1 16129777 946339 complement(1907226..1907435) 1 NC_000913.3 cold shock protein; stress protein, member of the CspA-family 1907435 cspC 946339 cspC Escherichia coli str. K-12 substr. MG1655 stress protein, member of the CspA-family NP_416337.1 1907226 R 511145 CDS NP_416338.1 16129778 946338 complement(1907448..1907591) 1 NC_000913.3 DUF2527 family heat-induced protein 1907591 yobF 946338 yobF Escherichia coli str. K-12 substr. MG1655 DUF2527 family heat-induced protein NP_416338.1 1907448 R 511145 CDS NP_416339.1 16129779 946350 complement(1908261..1908548) 1 NC_000913.3 putative inner membrane protein 1908548 yebO 946350 yebO Escherichia coli str. K-12 substr. MG1655 putative inner membrane protein NP_416339.1 1908261 R 511145 CDS NP_416340.1 16129780 946351 complement(1908623..1908766) 1 NC_000913.3 regulatory peptide for PhoPQ, feedback inhibition 1908766 mgrB 946351 mgrB Escherichia coli str. K-12 substr. MG1655 regulatory peptide for PhoPQ, feedback inhibition NP_416340.1 1908623 R 511145 CDS YP_588456.1 94541114 1450271 1908925..1909164 1 NC_000913.3 uncharacterized protein 1909164 yobH 1450271 yobH Escherichia coli str. K-12 substr. MG1655 uncharacterized protein YP_588456.1 1908925 D 511145 CDS NP_416341.1 16129781 946129 complement(1909308..1910099) 1 NC_000913.3 KDG regulon transcriptional repressor 1910099 kdgR 946129 kdgR Escherichia coli str. K-12 substr. MG1655 KDG regulon transcriptional repressor NP_416341.1 1909308 R 511145 CDS NP_416342.4 90111339 946048 1910276..1911649 1 NC_000913.3 putative transport protein; putative transporter 1911649 yebQ 946048 yebQ Escherichia coli str. K-12 substr. MG1655 putative transporter NP_416342.4 1910276 D 511145 CDS NP_416343.1 16129783 946076 complement(1911695..1912576) 1 NC_000913.3 heat shock protein, integral membrane protein; putative endopeptidase 1912576 htpX 946076 htpX Escherichia coli str. K-12 substr. MG1655 putative endopeptidase NP_416343.1 1911695 R 511145 CDS NP_416344.1 16129784 946096 complement(1912768..1914816) 1 NC_000913.3 carboxy-terminal protease for penicillin-binding protein 3 1914816 prc 946096 prc Escherichia coli str. K-12 substr. MG1655 carboxy-terminal protease for penicillin-binding protein 3 NP_416344.1 1912768 R 511145 CDS YP_026161.1 49176156 948950 complement(1914836..1915534) 1 NC_000913.3 regulator of ProP; putative structural element which influences activation of ProP; RNA chaperone, putative ProP translation regulator 1915534 proQ 948950 proQ Escherichia coli str. K-12 substr. MG1655 RNA chaperone, putative ProP translation regulator YP_026161.1 1914836 R 511145 CDS NP_416346.4 171701682 946086 complement(1915631..1916128) 1 NC_000913.3 free methionine-(R)-sulfoxide reductase 1916128 msrC 946086 msrC Escherichia coli str. K-12 substr. MG1655 free methionine-(R)-sulfoxide reductase NP_416346.4 1915631 R 511145 CDS NP_416347.1 16129786 946353 1916258..1917541 1 NC_000913.3 inner membrane protein 1917541 yebS 946353 yebS Escherichia coli str. K-12 substr. MG1655 inner membrane protein NP_416347.1 1916258 D 511145 CDS NP_416348.2 90111340 946352 1917510..1920143 1 NC_000913.3 MCE domain protein 1920143 yebT 946352 yebT Escherichia coli str. K-12 substr. MG1655 MCE domain protein NP_416348.2 1917510 D 511145 CDS NP_416349.2 90111341 946348 1920223..1921662 1 NC_000913.3 16S rRNA m(5)C1407 methyltransferase, SAM-dependent 1921662 rsmF 946348 rsmF Escherichia coli str. K-12 substr. MG1655 16S rRNA m(5)C1407 methyltransferase, SAM-dependent NP_416349.2 1920223 D 511145 CDS NP_416350.4 90111342 946347 1921780..1922016 1 NC_000913.3 uncharacterized protein 1922016 yebV 946347 yebV Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_416350.4 1921780 D 511145 CDS NP_416351.2 90111343 946354 1922121..1922312 1 NC_000913.3 uncharacterized protein 1922312 yebW 946354 yebW Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_416351.2 1922121 D 511145 CDS NP_416352.4 90111344 946356 complement(1922313..1922969) 1 NC_000913.3 serine/threonine-specific protein phosphatase 1 1922969 pphA 946356 pphA Escherichia coli str. K-12 substr. MG1655 serine/threonine-specific protein phosphatase 1 NP_416352.4 1922313 R 511145 CDS NP_416353.1 16129792 947014 complement(1923365..1923706) 1 NC_000913.3 DUF2511 family protein 1923706 yebY 947014 yebY Escherichia coli str. K-12 substr. MG1655 DUF2511 family protein NP_416353.1 1923365 R 511145 CDS NP_416354.1 16129793 947078 complement(1923719..1924591) 1 NC_000913.3 putative resistance protein; inner membrane protein 1924591 yebZ 947078 yebZ Escherichia coli str. K-12 substr. MG1655 inner membrane protein NP_416354.1 1923719 R 511145 CDS NP_416355.1 16129794 948315 complement(1924595..1924969) 1 NC_000913.3 CopC family protein 1924969 yobA 948315 yobA Escherichia coli str. K-12 substr. MG1655 CopC family protein NP_416355.1 1924595 R 511145 CDS NP_416356.1 16129795 947471 1925108..1925338 1 NC_000913.3 DNA polymerase III, theta subunit 1925338 holE 947471 holE Escherichia coli str. K-12 substr. MG1655 DNA polymerase III, theta subunit NP_416356.1 1925108 D 511145 CDS NP_416357.1 16129796 948329 1925440..1926096 1 NC_000913.3 C-N hydrolase family protein 1926096 yobB 948329 yobB Escherichia coli str. K-12 substr. MG1655 C-N hydrolase family protein NP_416357.1 1925440 D 511145 CDS NP_416358.1 16129797 946361 1926120..1926782 1 NC_000913.3 exodeoxyribonuclease 10; DNA exonuclease X 1926782 exoX 946361 exoX Escherichia coli str. K-12 substr. MG1655 exodeoxyribonuclease 10; DNA exonuclease X NP_416358.1 1926120 D 511145 CDS NP_416359.1 16129798 946358 complement(1926779..1928839) 1 NC_000913.3 protease II 1928839 ptrB 946358 ptrB Escherichia coli str. K-12 substr. MG1655 protease II NP_416359.1 1926779 R 511145 CDS NP_416360.1 16129799 946355 complement(1929048..1929707) 1 NC_000913.3 DUF533 family inner membrane protein 1929707 yebE 946355 yebE Escherichia coli str. K-12 substr. MG1655 DUF533 family inner membrane protein NP_416360.1 1929048 R 511145 CDS NP_416361.2 145698278 946363 complement(1930034..1930390) 1 NC_000913.3 extracellular Colicin M immunity family protein 1930390 yebF 946363 yebF Escherichia coli str. K-12 substr. MG1655 extracellular Colicin M immunity family protein NP_416361.2 1930034 R 511145 CDS NP_416362.1 16129801 946364 complement(1930457..1930747) 1 NC_000913.3 DNA damage-inducible protein regulated by LexA 1930747 yebG 946364 yebG Escherichia coli str. K-12 substr. MG1655 DNA damage-inducible protein regulated by LexA NP_416362.1 1930457 R 511145 CDS NP_416363.1 16129802 946368 1930881..1932059 1 NC_000913.3 phosphoribosylglycinamide formyltransferase 2 1932059 purT 946368 purT Escherichia coli str. K-12 substr. MG1655 phosphoribosylglycinamide formyltransferase 2 NP_416363.1 1930881 D 511145 CDS NP_416364.1 16129803 946367 complement(1932115..1932756) 1 NC_000913.3 2-keto-3-deoxygluconate 6-phosphate aldolase and 2-keto-4-hydroxyglutarate aldolase; multifunctional 2-keto-3-deoxygluconate 6-phosphate aldolase and 2-keto-4-hydroxyglutarate aldolase and oxaloacetate decarboxylase 1932756 eda 946367 eda Escherichia coli str. K-12 substr. MG1655 multifunctional 2-keto-3-deoxygluconate 6-phosphate aldolase and 2-keto-4-hydroxyglutarate aldolase and oxaloacetate decarboxylase NP_416364.1 1932115 R 511145 CDS NP_416365.1 16129804 946362 complement(1932793..1934604) 1 NC_000913.3 6-phosphogluconate dehydratase 1934604 edd 946362 edd Escherichia coli str. K-12 substr. MG1655 6-phosphogluconate dehydratase NP_416365.1 1932793 R 511145 CDS NP_416366.1 16129805 946370 complement(1934839..1936314) 1 NC_000913.3 glucose-6-phosphate 1-dehydrogenase 1936314 zwf 946370 zwf Escherichia coli str. K-12 substr. MG1655 glucose-6-phosphate 1-dehydrogenase NP_416366.1 1934839 R 511145 CDS NP_416367.1 16129806 946373 1936652..1937521 1 NC_000913.3 putative DNA-binding transcriptional regulator 1937521 yebK 946373 yebK Escherichia coli str. K-12 substr. MG1655 putative DNA-binding transcriptional regulator NP_416367.1 1936652 D 511145 CDS NP_416368.1 16129807 946527 1937649..1939091 1 NC_000913.3 pyruvate kinase II, glucose stimulated; pyruvate kinase II 1939091 pykA 946527 pykA Escherichia coli str. K-12 substr. MG1655 pyruvate kinase II NP_416368.1 1937649 D 511145 CDS NP_416369.1 16129808 945143 complement(1939222..1940193) 1 NC_000913.3 suppressor of htrB, heat shock protein; myristoyl-acyl carrier protein (ACP)-dependent acyltransferase 1940193 lpxM 945143 lpxM Escherichia coli str. K-12 substr. MG1655 myristoyl-acyl carrier protein (ACP)-dependent acyltransferase NP_416369.1 1939222 R 511145 CDS NP_416370.2 90111345 946376 complement(1940313..1941635) 1 NC_000913.3 murein DD-endopeptidase, space-maker hydrolase, septation protein 1941635 mepM 946376 mepM Escherichia coli str. K-12 substr. MG1655 murein DD-endopeptidase, space-maker hydrolase, septation protein NP_416370.2 1940313 R 511145 CDS NP_416371.4 90111346 946375 complement(1941651..1942583) 1 NC_000913.3 zinc transporter subunit: periplasmic-binding component of ABC superfamily 1942583 znuA 946375 znuA Escherichia coli str. K-12 substr. MG1655 zinc transporter subunit: periplasmic-binding component of ABC superfamily NP_416371.4 1941651 R 511145 CDS NP_416372.1 16129811 946374 1942662..1943417 1 NC_000913.3 zinc transporter subunit: ATP-binding component of ABC superfamily 1943417 znuC 946374 znuC Escherichia coli str. K-12 substr. MG1655 zinc transporter subunit: ATP-binding component of ABC superfamily NP_416372.1 1942662 D 511145 CDS NP_416373.1 16129812 946372 1943414..1944199 1 NC_000913.3 zinc transporter subunit: membrane component of ABC superfamily 1944199 znuB 946372 znuB Escherichia coli str. K-12 substr. MG1655 zinc transporter subunit: membrane component of ABC superfamily NP_416373.1 1943414 D 511145 CDS NP_416374.1 16129813 946371 complement(1944346..1945356) 1 NC_000913.3 Holliday junction helicase subunit A; branch migration; repair; ATP-dependent DNA helicase, component of RuvABC resolvasome 1945356 ruvB 946371 ruvB Escherichia coli str. K-12 substr. MG1655 ATP-dependent DNA helicase, component of RuvABC resolvasome NP_416374.1 1944346 R 511145 CDS NP_416375.1 16129814 946369 complement(1945365..1945976) 1 NC_000913.3 Holliday junction helicase subunit B; branch migration; repair; component of RuvABC resolvasome, regulatory subunit 1945976 ruvA 946369 ruvA Escherichia coli str. K-12 substr. MG1655 component of RuvABC resolvasome, regulatory subunit NP_416375.1 1945365 R 511145 CDS YP_002791244.1 226524725 7751641 complement(1946115..1946180) 1 NC_000913.3 uncharacterized protein 1946180 yobI 7751641 yobI Escherichia coli str. K-12 substr. MG1655 uncharacterized protein YP_002791244.1 1946115 R 511145 CDS NP_416376.2 90111347 946377 1946251..1946853 1 NC_000913.3 DUF830 family protein 1946853 yebB 946377 yebB Escherichia coli str. K-12 substr. MG1655 DUF830 family protein NP_416376.2 1946251 D 511145 CDS NP_416377.1 16129816 946378 complement(1946855..1947376) 1 NC_000913.3 Holliday junction nuclease; resolution of structures; repair; component of RuvABC resolvasome, endonuclease 1947376 ruvC 946378 ruvC Escherichia coli str. K-12 substr. MG1655 component of RuvABC resolvasome, endonuclease NP_416377.1 1946855 R 511145 CDS NP_416378.1 16129817 946379 complement(1947411..1948151) 1 NC_000913.3 UPF0082 family protein 1948151 yebC 946379 yebC Escherichia coli str. K-12 substr. MG1655 UPF0082 family protein NP_416378.1 1947411 R 511145 CDS NP_416379.1 16129818 946383 complement(1948180..1948632) 1 NC_000913.3 dihydroneopterin triphosphate pyrophosphatase 1948632 nudB 946383 nudB Escherichia coli str. K-12 substr. MG1655 dihydroneopterin triphosphate pyrophosphatase NP_416379.1 1948180 R 511145 CDS NP_416380.1 16129819 946385 complement(1948750..1950522) 1 NC_000913.3 aspartate tRNA synthetase; aspartyl-tRNA synthetase 1950522 aspS 946385 aspS Escherichia coli str. K-12 substr. MG1655 aspartyl-tRNA synthetase NP_416380.1 1948750 R 511145 CDS NP_416381.2 90111348 946384 1950832..1951398 1 NC_000913.3 isochorismatase family protein 1951398 yecD 946384 yecD Escherichia coli str. K-12 substr. MG1655 isochorismatase family protein NP_416381.2 1950832 D 511145 CDS NP_416382.1 16129821 946382 1951395..1952213 1 NC_000913.3 UPF0759 family protein 1952213 yecE 946382 yecE Escherichia coli str. K-12 substr. MG1655 UPF0759 family protein NP_416382.1 1951395 D 511145 CDS NP_416383.4 90111349 946381 1952266..1952661 1 NC_000913.3 MAPEG family inner membrane protein 1952661 yecN 946381 yecN Escherichia coli str. K-12 substr. MG1655 MAPEG family inner membrane protein NP_416383.4 1952266 D 511145 CDS NP_416384.1 16129823 946380 1952702..1953445 1 NC_000913.3 carboxy-SAM synthase 1953445 cmoA 946380 cmoA Escherichia coli str. K-12 substr. MG1655 carboxy-SAM synthase NP_416384.1 1952702 D 511145 CDS NP_416385.1 16129824 946387 1953442..1954413 1 NC_000913.3 putative enzyme; tRNA (cmo5U34)-carboxymethyltransferase, carboxy-SAM-dependent 1954413 cmoB 946387 cmoB Escherichia coli str. K-12 substr. MG1655 tRNA (cmo5U34)-carboxymethyltransferase, carboxy-SAM-dependent NP_416385.1 1953442 D 511145 CDS NP_416386.4 90111350 946389 complement(1954578..1957007) 1 NC_000913.3 trimethylamine N-oxide reductase system III, catalytic subunit 1957007 torZ 946389 torZ Escherichia coli str. K-12 substr. MG1655 trimethylamine N-oxide reductase system III, catalytic subunit NP_416386.4 1954578 R 511145 CDS NP_416387.1 16129826 946490 complement(1957032..1958132) 1 NC_000913.3 TMAO reductase III (TorYZ), cytochrome c-type subunit 1958132 torY 946490 torY Escherichia coli str. K-12 substr. MG1655 TMAO reductase III (TorYZ), cytochrome c-type subunit NP_416387.1 1957032 R 511145 CDS YP_025309.2 90111351 2847756 complement(1958520..1959266) 1 NC_000913.3 copper homeostasis protein 1959266 cutC 2847756 cutC Escherichia coli str. K-12 substr. MG1655 copper homeostasis protein YP_025309.2 1958520 R 511145 CDS NP_416389.4 90111352 946415 complement(1959280..1959846) 1 NC_000913.3 putative metal-binding enzyme 1959846 yecM 946415 yecM Escherichia coli str. K-12 substr. MG1655 putative metal-binding enzyme NP_416389.4 1959280 R 511145 CDS NP_416390.1 16129828 946452 1960062..1961795 1 NC_000913.3 arginine tRNA synthetase; arginyl-tRNA synthetase 1961795 argS 946452 argS Escherichia coli str. K-12 substr. MG1655 arginyl-tRNA synthetase NP_416390.1 1960062 D 511145 CDS NP_416391.4 90111353 946511 1961972..1962460 1 NC_000913.3 uncharacterized protein 1962460 yecT 946511 yecT Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_416391.4 1961972 D 511145 CDS NP_416392.1 16129830 946094 complement(1962580..1962972) 1 NC_000913.3 flagellar protein; proton seal during flagellar secretion 1962972 flhE 946094 flhE Escherichia coli str. K-12 substr. MG1655 proton seal during flagellar secretion NP_416392.1 1962580 R 511145 CDS NP_416393.1 16129831 946390 complement(1962972..1965050) 1 NC_000913.3 flagellar biosynthesis; possible export of flagellar proteins; putative flagellar export pore protein 1965050 flhA 946390 flhA Escherichia coli str. K-12 substr. MG1655 putative flagellar export pore protein NP_416393.1 1962972 R 511145 CDS NP_416394.1 16129832 946391 complement(1965043..1966191) 1 NC_000913.3 putative part of export apparatus for flagellar proteins; flagellin export apparatus, substrate specificity protein 1966191 flhB 946391 flhB Escherichia coli str. K-12 substr. MG1655 flagellin export apparatus, substrate specificity protein NP_416394.1 1965043 R 511145 CDS NP_416395.1 16129833 946392 complement(1966393..1967037) 1 NC_000913.3 chemotactic response; CheY protein phophatase; antagonist of CheY as switch regulator; chemotaxis regulator, protein phosphatase for CheY 1967037 cheZ 946392 cheZ Escherichia coli str. K-12 substr. MG1655 chemotaxis regulator, protein phosphatase for CheY NP_416395.1 1966393 R 511145 CDS NP_416396.1 16129834 946393 complement(1967048..1967437) 1 NC_000913.3 chemotaxis regulator transmits chemoreceptor signals to flagelllar motor components; chemotaxis regulator transmitting signal to flagellar motor component 1967437 cheY 946393 cheY Escherichia coli str. K-12 substr. MG1655 chemotaxis regulator transmitting signal to flagellar motor component NP_416396.1 1967048 R 511145 CDS NP_416397.1 16129835 946394 complement(1967452..1968501) 1 NC_000913.3 response regulator for chemotaxis (cheA sensor); protein methylesterase; fused chemotaxis regulator: protein-glutamate methylesterase in two-component regulatory system with CheA 1968501 cheB 946394 cheB Escherichia coli str. K-12 substr. MG1655 fused chemotaxis regulator: protein-glutamate methylesterase in two-component regulatory system with CheA NP_416397.1 1967452 R 511145 CDS NP_416398.1 16129836 946396 complement(1968504..1969364) 1 NC_000913.3 response regulator for chemotaxis; protein glutamate methyltransferase; chemotaxis regulator, protein-glutamate methyltransferase 1969364 cheR 946396 cheR Escherichia coli str. K-12 substr. MG1655 chemotaxis regulator, protein-glutamate methyltransferase NP_416398.1 1968504 R 511145 CDS NP_416399.1 16129837 946397 complement(1969383..1970984) 1 NC_000913.3 methyl-accepting chemotaxis protein IV, peptide sensor receptor; methyl-accepting protein IV 1970984 tap 946397 tap Escherichia coli str. K-12 substr. MG1655 methyl-accepting protein IV NP_416399.1 1969383 R 511145 CDS NP_416400.1 16129838 946399 complement(1971030..1972691) 1 NC_000913.3 methyl-accepting chemotaxis protein II, aspartate sensor receptor; methyl-accepting chemotaxis protein II 1972691 tar 946399 tar Escherichia coli str. K-12 substr. MG1655 methyl-accepting chemotaxis protein II NP_416400.1 1971030 R 511145 CDS NP_416401.1 16129839 946400 complement(1972836..1973339) 1 NC_000913.3 positive regulator of CheA protein activity; purine-binding chemotaxis protein 1973339 cheW 946400 cheW Escherichia coli str. K-12 substr. MG1655 purine-binding chemotaxis protein NP_416401.1 1972836 R 511145 CDS NP_416402.1 16129840 946401 complement(1973360..1975324) 1 NC_000913.3 sensory transducer kinase between chemo- signal receptors and CheB and CheY; fused chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY: sensory histidine kinase/signal sensing protein 1975324 cheA 946401 cheA Escherichia coli str. K-12 substr. MG1655 fused chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY: sensory histidine kinase/signal sensing protein NP_416402.1 1973360 R 511145 CDS NP_416403.1 16129841 946402 complement(1975329..1976255) 1 NC_000913.3 enables flagellar motor rotation, linking torque machinery to cell wall; protein that enables flagellar motor rotation 1976255 motB 946402 motB Escherichia coli str. K-12 substr. MG1655 protein that enables flagellar motor rotation NP_416403.1 1975329 R 511145 CDS NP_416404.1 16129842 947564 complement(1976252..1977139) 1 NC_000913.3 proton conductor component of motor; no effect on switching; proton conductor component of flagella motor 1977139 motA 947564 motA Escherichia coli str. K-12 substr. MG1655 proton conductor component of flagella motor NP_416404.1 1976252 R 511145 CDS NP_416405.1 16129843 947280 complement(1977266..1977844) 1 NC_000913.3 regulator of flagellar biosynthesis acting on class 2 operons; transcription initiation factor?; flagellar class II regulon transcriptional activator, with FlhD 1977844 flhC 947280 flhC Escherichia coli str. K-12 substr. MG1655 flagellar class II regulon transcriptional activator, with FlhD NP_416405.1 1977266 R 511145 CDS NP_416406.4 145698279 945442 complement(1977847..1978197) 1 NC_000913.3 regulator of flagellar biosynthesis, acting on class 2 operons; transcriptional initiation factor?; flagellar class II regulon transcriptional activator, with FlhC 1978197 flhD 945442 flhD Escherichia coli str. K-12 substr. MG1655 flagellar class II regulon transcriptional activator, with FlhC NP_416406.4 1977847 R 511145 CDS NP_416407.1 16129845 945867 complement(1978518..1979021) 1 NC_000913.3 IS1 transposase B 1979021 insB1 945867 insB1 Escherichia coli str. K-12 substr. MG1655 IS1 transposase B NP_416407.1 1978518 R 511145 CDS NP_416408.1 16129846 945800 complement(1978940..1979215) 1 NC_000913.3 IS1 repressor TnpA 1979215 insA 945800 insA Escherichia coli str. K-12 substr. MG1655 IS1 repressor TnpA NP_416408.1 1978940 R 511145 CDS NP_416409.1 16129847 946404 1979753..1980181 1 NC_000913.3 putative regulator; universal stress protein 1980181 uspC 946404 uspC Escherichia coli str. K-12 substr. MG1655 universal stress protein NP_416409.1 1979753 D 511145 CDS NP_416410.1 16129848 946405 complement(1980188..1981612) 1 NC_000913.3 trehalose-6-phosphate synthase 1981612 otsA 946405 otsA Escherichia coli str. K-12 substr. MG1655 trehalose-6-phosphate synthase NP_416410.1 1980188 R 511145 CDS NP_416411.1 16129849 946406 complement(1981587..1982387) 1 NC_000913.3 trehalose-6-phosphate phophatase, biosynthetic; trehalose-6-phosphate phosphatase, biosynthetic 1982387 otsB 946406 otsB Escherichia coli str. K-12 substr. MG1655 trehalose-6-phosphate phosphatase, biosynthetic NP_416411.1 1981587 R 511145 CDS YP_026162.2 145698280 948923 complement(1982554..1983540) 1 NC_000913.3 high-affinity L-arabinose transport protein (ABC superfamily, membrane); fused L-arabinose transporter subunits of ABC superfamily: membrane components 1983540 araH 948923 araH Escherichia coli str. K-12 substr. MG1655 fused L-arabinose transporter subunits of ABC superfamily: membrane components YP_026162.2 1982554 R 511145 CDS NP_416413.1 16129850 946408 complement(1983555..1985069) 1 NC_000913.3 ATP-binding component of high-affinity L-arabinose transport system; fused L-arabinose transporter subunits of ABC superfamily: ATP-binding components 1985069 araG 946408 araG Escherichia coli str. K-12 substr. MG1655 fused L-arabinose transporter subunits of ABC superfamily: ATP-binding components NP_416413.1 1983555 R 511145 CDS NP_416414.1 16129851 946409 complement(1985139..1986128) 1 NC_000913.3 L-arabinose-binding periplasmic protein; periplasmic-binding component of ABC superfamily; L-arabinose transporter subunit 1986128 araF 946409 araF Escherichia coli str. K-12 substr. MG1655 L-arabinose transporter subunit NP_416414.1 1985139 R 511145 CDS NP_416415.1 16129852 946407 1986925..1987428 1 NC_000913.3 ferritin-like protein; ferritin B, putative ferrous iron reservoir 1987428 ftnB 946407 ftnB Escherichia coli str. K-12 substr. MG1655 ferritin B, putative ferrous iron reservoir NP_416415.1 1986925 D 511145 CDS NP_416416.2 94541093 946388 complement(1987507..1987758) 1 NC_000913.3 uncharacterized protein 1987758 yecJ 946388 yecJ Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_416416.2 1987507 R 511145 CDS YP_002791245.1 226524726 7751642 complement(1987873..1987959) 1 NC_000913.3 acid-inducible small membrane-associated protein 1987959 azuC 7751642 azuC Escherichia coli str. K-12 substr. MG1655 acid-inducible small membrane-associated protein YP_002791245.1 1987873 R 511145 CDS NP_416417.1 16129854 946386 1988222..1988545 1 NC_000913.3 lipoprotein, function unknown 1988545 yecR 946386 yecR Escherichia coli str. K-12 substr. MG1655 lipoprotein, function unknown NP_416417.1 1988222 D 511145 CDS NP_416418.1 16129855 946410 1988716..1989213 1 NC_000913.3 cytoplasmic ferritin (an iron storage protein); ferritin iron storage protein (cytoplasmic) 1989213 ftnA 946410 ftnA Escherichia coli str. K-12 substr. MG1655 ferritin iron storage protein (cytoplasmic) NP_416418.1 1988716 D 511145 CDS NP_416419.1 16129856 946411 complement(1989251..1989490) 1 NC_000913.3 DUF2492 family protein 1989490 yecH 946411 yecH Escherichia coli str. K-12 substr. MG1655 DUF2492 family protein NP_416419.1 1989251 R 511145 CDS NP_416420.1 16129857 946412 1989681..1990892 1 NC_000913.3 tyrosine-specific transport system; tyrosine transporter 1990892 tyrP 946412 tyrP Escherichia coli str. K-12 substr. MG1655 tyrosine transporter NP_416420.1 1989681 D 511145 CDS NP_416421.1 16129858 945061 complement(1990954..1991619) 1 NC_000913.3 UPF0149 family protein 1991619 yecA 945061 yecA Escherichia coli str. K-12 substr. MG1655 UPF0149 family protein NP_416421.1 1990954 R 511145 CDS NP_416422.1 16129859 945791 complement(1992269..1992817) 1 NC_000913.3 phosphatidylglycerophosphate synthetase = CDP-1,2-diacyl-sn-glycero-3-phosphate phosphatidyl transferase; phosphatidylglycerophosphate synthetase 1992817 pgsA 945791 pgsA Escherichia coli str. K-12 substr. MG1655 phosphatidylglycerophosphate synthetase NP_416422.1 1992269 R 511145 CDS NP_416423.4 90111354 947203 complement(1992874..1994706) 1 NC_000913.3 excinuclease ABC, subunit C; repair of UV damage to DNA; excinuclease UvrABC, endonuclease subunit 1994706 uvrC 947203 uvrC Escherichia coli str. K-12 substr. MG1655 excinuclease UvrABC, endonuclease subunit NP_416423.4 1992874 R 511145 CDS NP_416424.1 16129861 946424 complement(1994703..1995359) 1 NC_000913.3 putative 2-component transcriptional regulator; response regulator in two-component regulatory system with BarA 1995359 uvrY 946424 uvrY Escherichia coli str. K-12 substr. MG1655 response regulator in two-component regulatory system with BarA NP_416424.1 1994703 R 511145 CDS NP_416425.1 16129862 946420 1995818..1996042 1 NC_000913.3 DUF2594 family protein 1996042 yecF 946420 yecF Escherichia coli str. K-12 substr. MG1655 DUF2594 family protein NP_416425.1 1995818 D 511145 CDS NP_416426.1 16129863 946421 complement(1996110..1996832) 1 NC_000913.3 transcriptional regulator of ftsQAZ gene cluster; quorum-sensing transcriptional activator 1996832 sdiA 946421 sdiA Escherichia coli str. K-12 substr. MG1655 quorum-sensing transcriptional activator NP_416426.1 1996110 R 511145 CDS NP_416427.1 16129864 946422 complement(1997062..1997814) 1 NC_000913.3 putative ATP-binding component of a transport system; putative ABC superfamily transporter ATP-binding subunit 1997814 yecC 946422 yecC Escherichia coli str. K-12 substr. MG1655 putative ABC superfamily transporter ATP-binding subunit NP_416427.1 1997062 R 511145 CDS NP_416428.1 16129865 949105 complement(1997811..1998479) 1 NC_000913.3 putative transport system permease protein (former yecC); ABC family putative inner membrane permease 1998479 yecS 949105 yecS Escherichia coli str. K-12 substr. MG1655 ABC family putative inner membrane permease NP_416428.1 1997811 R 511145 CDS NP_416429.4 90111355 946831 complement(1998494..1999480) 1 NC_000913.3 putative 1-aminocyclopropane-1-carboxylate deaminase; D-cysteine desulfhydrase, PLP-dependent 1999480 dcyD 946831 dcyD Escherichia coli str. K-12 substr. MG1655 D-cysteine desulfhydrase, PLP-dependent NP_416429.4 1998494 R 511145 CDS NP_416430.1 16129867 948833 complement(1999585..2000385) 1 NC_000913.3 putative periplasmic binding transport protein; periplasmic-binding component of ABC superfamily; cystine transporter subunit 2000385 fliY 948833 fliY Escherichia coli str. K-12 substr. MG1655 cystine transporter subunit NP_416430.1 1999585 R 511145 CDS NP_416431.2 90111356 946833 complement(2000473..2001024) 1 NC_000913.3 RpoS antagonist; putative regulator of FliA activity 2001024 fliZ 946833 fliZ Escherichia coli str. K-12 substr. MG1655 RpoS antagonist; putative regulator of FliA activity NP_416431.2 2000473 R 511145 CDS NP_416432.3 49176170 948824 complement(2001070..2001789) 1 NC_000913.3 flagellar biosynthesis; alternative sigma factor 28; regulation of flagellar operons; RNA polymerase, sigma 28 (sigma F) factor 2001789 fliA 948824 fliA Escherichia coli str. K-12 substr. MG1655 RNA polymerase, sigma 28 (sigma F) factor NP_416432.3 2001070 R 511145 CDS NP_416433.1 16129870 949101 complement(2002110..2003606) 1 NC_000913.3 flagellar biosynthesis; flagellin, filament structural protein; flagellar filament structural protein (flagellin) 2003606 fliC 949101 fliC Escherichia coli str. K-12 substr. MG1655 flagellar filament structural protein (flagellin) NP_416433.1 2002110 R 511145 CDS NP_416434.1 16129871 946428 2003872..2005278 1 NC_000913.3 flagellar biosynthesis; filament capping protein; enables filament assembly; flagellar filament capping protein 2005278 fliD 946428 fliD Escherichia coli str. K-12 substr. MG1655 flagellar filament capping protein NP_416434.1 2003872 D 511145 CDS NP_416435.1 16129872 946429 2005303..2005713 1 NC_000913.3 flagellar biosynthesis; repressor of class 3a and 3b operons (RflA activity); flagellar protein potentiates polymerization 2005713 fliS 946429 fliS Escherichia coli str. K-12 substr. MG1655 flagellar protein potentiates polymerization NP_416435.1 2005303 D 511145 CDS NP_416436.1 16129873 946433 2005713..2006078 1 NC_000913.3 flagellar biosynthesis; repressor of class 3a and 3b operons (RflA activity); putative flagellar synthesis and assembly chaperone 2006078 fliT 946433 fliT Escherichia coli str. K-12 substr. MG1655 putative flagellar synthesis and assembly chaperone NP_416436.1 2005713 D 511145 CDS NP_416437.1 16129874 946434 2006156..2007643 1 NC_000913.3 cytoplasmic alpha-amylase 2007643 amyA 946434 amyA Escherichia coli str. K-12 substr. MG1655 cytoplasmic alpha-amylase NP_416437.1 2006156 D 511145 CDS NP_416438.1 16129875 949082 complement(2007677..2008090) 1 NC_000913.3 lipoprotein 2008090 yedD 949082 yedD Escherichia coli str. K-12 substr. MG1655 lipoprotein NP_416438.1 2007677 R 511145 CDS NP_416439.1 16129876 945192 2008277..2009482 1 NC_000913.3 putative transport system permease protein; UPF0394 family sulfur transport domain-containing inner membrane protein 2009482 yedE 945192 yedE Escherichia coli str. K-12 substr. MG1655 UPF0394 family sulfur transport domain-containing inner membrane protein NP_416439.1 2008277 D 511145 CDS NP_416440.1 16129877 946909 2009479..2009712 1 NC_000913.3 putative TusA family sulfurtransferase 2009712 yedF 946909 yedF Escherichia coli str. K-12 substr. MG1655 putative TusA family sulfurtransferase NP_416440.1 2009479 D 511145 CDS YP_025310.1 49176171 946435 2009821..2010489 1 NC_000913.3 DUF159 family protein 2010489 yedK 946435 yedK Escherichia coli str. K-12 substr. MG1655 DUF159 family protein YP_025310.1 2009821 D 511145 CDS NP_416442.1 16129879 946437 2010600..2011079 1 NC_000913.3 putative acyl transferase 2011079 yedL 946437 yedL Escherichia coli str. K-12 substr. MG1655 putative acyl transferase NP_416442.1 2010600 D 511145 CDS b4495 2847704 complement(join(2011223..2011357,2011363..2012040,2012040..2012351)) 1 NC_000913.3 pseudogene, IpaH/YopM family; <NULL_VALUE> 2012351 yedN 2847704 yedN Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 2011223 R 511145 CDS b1936 946445 2012502..2012663 1 NC_000913.3 pseudogene, phage integrase family; <NULL_VALUE> 2012663 intG 946445 intG Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 2012502 D 511145 CDS NP_416447.1 16129884 946446 complement(2012700..2013014) 1 NC_000913.3 flagellar biosynthesis; basal-body component, possibly at (MS-ring)-rod junction; flagellar basal-body component 2013014 fliE 946446 fliE Escherichia coli str. K-12 substr. MG1655 flagellar basal-body component NP_416447.1 2012700 R 511145 CDS NP_416448.1 16129885 946448 2013229..2014887 1 NC_000913.3 flagellar biosynthesis; basal-body MS(membrane and supramembrane)-ring and collar protein; flagellar basal-body MS-ring and collar protein 2014887 fliF 946448 fliF Escherichia coli str. K-12 substr. MG1655 flagellar basal-body MS-ring and collar protein NP_416448.1 2013229 D 511145 CDS NP_416449.1 16129886 946451 2014880..2015875 1 NC_000913.3 flagellar biosynthesis, component of motor switching and energizing, enabling rotation and determining its direction; flagellar motor switching and energizing component 2015875 fliG 946451 fliG Escherichia coli str. K-12 substr. MG1655 flagellar motor switching and energizing component NP_416449.1 2014880 D 511145 CDS NP_416450.2 90111357 946456 2015868..2016554 1 NC_000913.3 flagellar biosynthesis; export of flagellar proteins?; negative regulator of FliI ATPase activity 2016554 fliH 946456 fliH Escherichia coli str. K-12 substr. MG1655 negative regulator of FliI ATPase activity NP_416450.2 2015868 D 511145 CDS NP_416451.1 16129888 946457 2016554..2017927 1 NC_000913.3 flagellum-specific ATP synthase 2017927 fliI 946457 fliI Escherichia coli str. K-12 substr. MG1655 flagellum-specific ATP synthase NP_416451.1 2016554 D 511145 CDS NP_416452.1 16129889 946454 2017946..2018389 1 NC_000913.3 flagellar fliJ protein; flagellar protein 2018389 fliJ 946454 fliJ Escherichia coli str. K-12 substr. MG1655 flagellar protein NP_416452.1 2017946 D 511145 CDS NP_416453.1 16129890 946449 2018386..2019513 1 NC_000913.3 flagellar hook-length control protein 2019513 fliK 946449 fliK Escherichia coli str. K-12 substr. MG1655 flagellar hook-length control protein NP_416453.1 2018386 D 511145 CDS NP_416454.1 16129891 946443 2019618..2020082 1 NC_000913.3 flagellar biosynthesis; flagellar biosynthesis protein 2020082 fliL 946443 fliL Escherichia coli str. K-12 substr. MG1655 flagellar biosynthesis protein NP_416454.1 2019618 D 511145 CDS NP_416455.1 16129892 946442 2020087..2021091 1 NC_000913.3 flagellar biosynthesis, component of motor switch and energizing, enabling rotation and determining its direction; flagellar motor switching and energizing component 2021091 fliM 946442 fliM Escherichia coli str. K-12 substr. MG1655 flagellar motor switching and energizing component NP_416455.1 2020087 D 511145 CDS NP_416456.1 16129893 946423 2021088..2021501 1 NC_000913.3 flagellar biosynthesis, component of motor switch and energizing, enabling rotation and determining its direction; flagellar motor switching and energizing component 2021501 fliN 946423 fliN Escherichia coli str. K-12 substr. MG1655 flagellar motor switching and energizing component NP_416456.1 2021088 D 511145 CDS NP_416457.4 90111358 946458 2021504..2021869 1 NC_000913.3 flagellar biosynthesis; flagellar biosynthesis protein 2021869 fliO 946458 fliO Escherichia coli str. K-12 substr. MG1655 flagellar biosynthesis protein NP_416457.4 2021504 D 511145 CDS NP_416458.1 16129895 946462 2021869..2022606 1 NC_000913.3 flagellar biosynthesis; flagellar biosynthesis protein 2022606 fliP 946462 fliP Escherichia coli str. K-12 substr. MG1655 flagellar biosynthesis protein NP_416458.1 2021869 D 511145 CDS NP_416459.1 16129896 946463 2022616..2022885 1 NC_000913.3 flagellar biosynthesis; flagellar biosynthesis protein 2022885 fliQ 946463 fliQ Escherichia coli str. K-12 substr. MG1655 flagellar biosynthesis protein NP_416459.1 2022616 D 511145 CDS NP_416460.1 16129897 946464 2022893..2023678 1 NC_000913.3 flagellar biosynthesis; flagellar export pore protein 2023678 fliR 946464 fliR Escherichia coli str. K-12 substr. MG1655 flagellar export pore protein NP_416460.1 2022893 D 511145 CDS NP_416461.1 16129898 946467 2023968..2024591 1 NC_000913.3 positive regulator for ctr capsule biosynthesis, positive transcription factor; transcriptional regulator of colanic acid capsular biosynthesis 2024591 rcsA 946467 rcsA Escherichia coli str. K-12 substr. MG1655 transcriptional regulator of colanic acid capsular biosynthesis NP_416461.1 2023968 D 511145 CDS NP_416462.1 16129899 946468 complement(2024635..2024823) 1 NC_000913.3 uncharacterized protein 2024823 dsrB 946468 dsrB Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_416462.1 2024635 R 511145 CDS NP_416463.4 90111359 946469 2024986..2025213 1 NC_000913.3 uncharacterized protein 2025213 yodD 946469 yodD Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_416463.4 2024986 D 511145 CDS NP_416464.1 16129901 946472 2025511..2026326 1 NC_000913.3 putative mannosyl-3-phosphoglycerate phosphatase 2026326 yedP 946472 yedP Escherichia coli str. K-12 substr. MG1655 putative mannosyl-3-phosphoglycerate phosphatase NP_416464.1 2025511 D 511145 CDS NP_416465.2 90111360 946471 complement(2026323..2028017) 1 NC_000913.3 putative membrane-anchored diguanylate cyclase 2028017 yedQ 946471 yedQ Escherichia coli str. K-12 substr. MG1655 putative membrane-anchored diguanylate cyclase NP_416465.2 2026323 R 511145 CDS NP_416466.1 16129903 946466 complement(2028188..2028370) 1 NC_000913.3 uncharacterized protein 2028370 yodC 946466 yodC Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_416466.1 2028188 R 511145 CDS NP_416467.1 16129904 946465 complement(2028449..2029366) 1 NC_000913.3 DUF808 family inner membrane protein 2029366 yedI 946465 yedI Escherichia coli str. K-12 substr. MG1655 DUF808 family inner membrane protein NP_416467.1 2028449 R 511145 CDS NP_416468.1 16129905 946461 2029539..2030459 1 NC_000913.3 putative transmembrane subunit; amino acid exporter for phenylalanine, threonine 2030459 yedA 946461 yedA Escherichia coli str. K-12 substr. MG1655 amino acid exporter for phenylalanine, threonine NP_416468.1 2029539 D 511145 CDS NP_416469.1 16129906 946476 complement(2030448..2030918) 1 NC_000913.3 DNA mismatch endonuclease, patch repair protein; DNA mismatch endonuclease of very short patch repair 2030918 vsr 946476 vsr Escherichia coli str. K-12 substr. MG1655 DNA mismatch endonuclease of very short patch repair NP_416469.1 2030448 R 511145 CDS NP_416470.1 16129907 946479 complement(2030899..2032317) 1 NC_000913.3 DNA cytosine methyltransferase 2032317 dcm 946479 dcm Escherichia coli str. K-12 substr. MG1655 DNA cytosine methyltransferase NP_416470.1 2030899 R 511145 CDS NP_416471.1 16129908 946478 complement(2032384..2033079) 1 NC_000913.3 putative HD superfamily phosphohydrolase 2033079 yedJ 946478 yedJ Escherichia coli str. K-12 substr. MG1655 putative HD superfamily phosphohydrolase NP_416471.1 2032384 R 511145 CDS NP_416472.2 90111361 946477 complement(2033119..2033484) 1 NC_000913.3 inner membrane protein 2033484 yedR 946477 yedR Escherichia coli str. K-12 substr. MG1655 inner membrane protein NP_416472.2 2033119 R 511145 CDS b4496 2847763 join(2034051..2034713,2034713..2035243) 1 NC_000913.3 pseudogene, outer membrane protein homology; putative outer membrane protein; <NULL_VALUE> 2035243 yedS 2847763 yedS Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 2034051 D 511145 CDS NP_416476.1 16129913 946481 2035835..2036686 1 NC_000913.3 glyoxalase III and Hsp31 molecular chaperone 2036686 hchA 946481 hchA Escherichia coli str. K-12 substr. MG1655 glyoxalase III and Hsp31 molecular chaperone NP_416476.1 2035835 D 511145 CDS NP_416477.1 16129914 946487 complement(2036794..2038152) 1 NC_000913.3 putative 2-component sensor protein; putative sensory kinase in two-component regulatory system with YedW 2038152 yedV 946487 yedV Escherichia coli str. K-12 substr. MG1655 putative sensory kinase in two-component regulatory system with YedW NP_416477.1 2036794 R 511145 CDS NP_416478.2 90111362 946486 complement(2038152..2038823) 1 NC_000913.3 putative 2-component transcriptional regulator; response regulator family protein 2038823 yedW 946486 yedW Escherichia coli str. K-12 substr. MG1655 response regulator family protein NP_416478.2 2038152 R 511145 CDS NP_416479.1 16129916 946485 2038956..2039369 1 NC_000913.3 hydroxyisourate hydrolase 2039369 hiuH 946485 hiuH Escherichia coli str. K-12 substr. MG1655 hydroxyisourate hydrolase NP_416479.1 2038956 D 511145 CDS NP_416480.1 16129917 946484 2039478..2040482 1 NC_000913.3 putative reductase; membrane-anchored, periplasmic TMAO, DMSO reductase 2040482 yedY 946484 yedY Escherichia coli str. K-12 substr. MG1655 membrane-anchored, periplasmic TMAO, DMSO reductase NP_416480.1 2039478 D 511145 CDS NP_416481.1 16129918 946483 2040483..2041118 1 NC_000913.3 inner membrane heme subunit for periplasmic YedYZ reductase 2041118 yedZ 946483 yedZ Escherichia coli str. K-12 substr. MG1655 inner membrane heme subunit for periplasmic YedYZ reductase NP_416481.1 2040483 D 511145 CDS NP_416482.1 16129919 946480 2041375..2042025 1 NC_000913.3 zinc and cadmium binding protein, periplasmic 2042025 zinT 946480 zinT Escherichia coli str. K-12 substr. MG1655 zinc and cadmium binding protein, periplasmic NP_416482.1 2041375 D 511145 CDS NP_416483.4 90111363 946491 2042368..2042898 1 NC_000913.3 cytochrome b561 homolog 1; cytochrome b561 homolog 2042898 yodB 946491 yodB Escherichia coli str. K-12 substr. MG1655 cytochrome b561 homolog NP_416483.4 2042368 D 511145 CDS NP_416484.2 90111364 946489 2043651..2044448 1 NC_000913.3 anti-repressor for DgsA(Mlc) 2044448 mtfA 946489 mtfA Escherichia coli str. K-12 substr. MG1655 anti-repressor for DgsA(Mlc) NP_416484.2 2043651 D 511145 CDS NP_416485.4 145698281 946498 2044938..2052014 1 NC_000913.3 putative factor; putative adhesin 2052014 yeeJ 946498 yeeJ Escherichia coli str. K-12 substr. MG1655 putative adhesin NP_416485.4 2044938 D 511145 CDS b4497 2847764 complement(2052276..2053328) 1 NC_000913.3 pseudogene, glycosyltransferase homology; <NULL_VALUE> 2053328 yeeL 2847764 yeeL Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 2052276 R 511145 CDS NP_416488.1 16129925 946495 2053643..2054959 1 NC_000913.3 shikimate transporter 2054959 shiA 946495 shiA Escherichia coli str. K-12 substr. MG1655 shikimate transporter NP_416488.1 2053643 D 511145 CDS NP_416489.1 16129926 946508 2055061..2056515 1 NC_000913.3 AMP nucleosidase 2056515 amn 946508 amn Escherichia coli str. K-12 substr. MG1655 AMP nucleosidase NP_416489.1 2055061 D 511145 CDS NP_416490.1 16129927 946493 2056858..2057574 1 NC_000913.3 UPF0082 family protein 2057574 yeeN 946493 yeeN Escherichia coli str. K-12 substr. MG1655 UPF0082 family protein NP_416490.1 2056858 D 511145 CDS NP_416491.2 226524727 946506 complement(2058203..2059690) 1 NC_000913.3 putative multdrug exporter, MATE family 2059690 yeeO 946506 yeeO Escherichia coli str. K-12 substr. MG1655 putative multdrug exporter, MATE family NP_416491.2 2058203 R 511145 CDS NP_416492.1 16129929 946502 complement(2059964..2060914) 1 NC_000913.3 transcriptional regulator cys regulon; accessory regulatory circuit affecting cysM; ssuEADCB/tauABCD operon transcriptional activator 2060914 cbl 946502 cbl Escherichia coli str. K-12 substr. MG1655 ssuEADCB/tauABCD operon transcriptional activator NP_416492.1 2059964 R 511145 CDS NP_416493.1 16129930 946501 complement(2061016..2061933) 1 NC_000913.3 nitrogen assimilation control protein; nitrogen assimilation regulon transcriptional regulator; autorepressor 2061933 nac 946501 nac Escherichia coli str. K-12 substr. MG1655 nitrogen assimilation regulon transcriptional regulator; autorepressor NP_416493.1 2061016 R 511145 CDS NP_416494.1 16129931 945273 complement(2062391..2063323) 1 NC_000913.3 L,D-transpeptidase linking Lpp to murein 2063323 ldtA 945273 ldtA Escherichia coli str. K-12 substr. MG1655 L,D-transpeptidase linking Lpp to murein NP_416494.1 2062391 R 511145 CDS NP_416495.1 16129932 946517 complement(2063388..2064467) 1 NC_000913.3 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 2064467 cobT 946517 cobT Escherichia coli str. K-12 substr. MG1655 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase NP_416495.1 2063388 R 511145 CDS NP_416496.1 16129933 946520 complement(2064479..2065222) 1 NC_000913.3 cobalamin synthase 2065222 cobS 946520 cobS Escherichia coli str. K-12 substr. MG1655 cobalamin synthase NP_416496.1 2064479 R 511145 CDS NP_416497.1 16129934 946519 complement(2065219..2065764) 1 NC_000913.3 cobinamide kinase/cobinamide phosphate guanylyltransferase; bifunctional cobinamide kinase/ cobinamide phosphate guanylyltransferase 2065764 cobU 946519 cobU Escherichia coli str. K-12 substr. MG1655 bifunctional cobinamide kinase/ cobinamide phosphate guanylyltransferase NP_416497.1 2065219 R 511145 CDS b4639 5625565 complement(2066068..2066154) 1 NC_000913.3 pseudogene; <NULL_VALUE> 2066154 yeeH 5625565 yeeH Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 2066068 R 511145 CDS NP_416498.1 16129935 946507 complement(2066305..2067321) 1 NC_000913.3 IS5 transposase and trans-activator 2067321 insH1 946507 insH1 Escherichia coli str. K-12 substr. MG1655 IS5 transposase and trans-activator NP_416498.1 2066305 R 511145 CDS b4640 5625566 complement(join(2067360..2067458,2067458..2067892)) 1 NC_000913.3 pseudogene, CP4-44 putative prophage remnant;Phage or Prophage Related; <NULL_VALUE> 2067892 yoeG 5625566 yoeG Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 2067360 R 511145 CDS b4641 5625567 complement(2068261..2068419) 1 NC_000913.3 pseudogene, CP4-44 putative prophage remnant;Phage or Prophage Related; <NULL_VALUE> 2068419 yoeH 5625567 yoeH Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 2068261 R 511145 CDS b4582 4056042 join(2068635..2068938,2070270..2070474) 1 NC_000913.3 CP4-44 prophage; putative disrupted hemin or colicin receptor;Phage or Prophage Related; interrupted by IS2 and C-terminal deletion; <NULL_VALUE> 2070474 yoeA 4056042 yoeA Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 2068635 D 511145 CDS NP_416500.1 16129937 946403 complement(2068952..2069857) 1 NC_000913.3 IS2 transposase TnpB 2069857 insD1 946403 insD1 Escherichia coli str. K-12 substr. MG1655 IS2 transposase TnpB NP_416500.1 2068952 R 511145 CDS YP_026163.2 145698282 946455 complement(2069815..2070180) 1 NC_000913.3 IS2 repressor TnpA 2070180 insC1 946455 insC1 Escherichia coli str. K-12 substr. MG1655 IS2 repressor TnpA YP_026163.2 2069815 R 511145 CDS b1999 946524 2070660..2071211 1 NC_000913.3 pseudogene, CP4-44 prophage; 50S ribosome-binding GTPase family;Phage or Prophage Related; putative histone; <NULL_VALUE> 2071211 yeeP 946524 yeeP Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 2070660 D 511145 CDS YP_026164.1 49176177 946540 2071539..2074658 1 NC_000913.3 antigen 43, phase-variable bipartite outer membrane fluffing protein; CP4-44 prophage; antigen 43 (Ag43) phase-variable biofilm formation autotransporter 2074658 flu 946540 flu Escherichia coli str. K-12 substr. MG1655 CP4-44 prophage; antigen 43 (Ag43) phase-variable biofilm formation autotransporter YP_026164.1 2071539 D 511145 CDS NP_416505.2 90111368 946512 2074779..2076311 1 NC_000913.3 CP4-44 prophage; putative membrane protein 2076311 yeeR 946512 yeeR Escherichia coli str. K-12 substr. MG1655 CP4-44 prophage; putative membrane protein NP_416505.2 2074779 D 511145 CDS NP_416506.1 16129943 946514 2076308..2076754 1 NC_000913.3 putative DNA repair protein, RADC family; CP4-44 prophage; putative DNA repair protein 2076754 yeeS 946514 yeeS Escherichia coli str. K-12 substr. MG1655 CP4-44 prophage; putative DNA repair protein NP_416506.1 2076308 D 511145 CDS NP_416507.1 16129944 946513 2076817..2077038 1 NC_000913.3 CP4-44 prophage; uncharacterized protein 2077038 yeeT 946513 yeeT Escherichia coli str. K-12 substr. MG1655 CP4-44 prophage; uncharacterized protein NP_416507.1 2076817 D 511145 CDS NP_416508.1 16129945 946510 2077112..2077480 1 NC_000913.3 putative structural protein; CP4-44 prophage; cytoskeleton bundling-enhancing factor A; CbtA antitoxin 2077480 cbeA 946510 cbeA Escherichia coli str. K-12 substr. MG1655 CP4-44 prophage; cytoskeleton bundling-enhancing factor A; CbtA antitoxin NP_416508.1 2077112 D 511145 CDS NP_416509.1 16129946 946534 2077569..2077943 1 NC_000913.3 CP4-44 prophage; toxin of the YeeV-YeeU toxin-antitoxin system 2077943 cbtA 946534 cbtA Escherichia coli str. K-12 substr. MG1655 CP4-44 prophage; toxin of the YeeV-YeeU toxin-antitoxin system NP_416509.1 2077569 D 511145 CDS b2006 946535 2077940..2078107 1 NC_000913.3 CP4-44 prophage; uncharacterized protein;Phage or Prophage Related; <NULL_VALUE> 2078107 yeeW 946535 yeeW Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 2077940 D 511145 CDS b4642 5625568 complement(2078549..2078677) 1 NC_000913.3 pseudogene, CP4-44 putative prophage remnant;Phage or Prophage Related; <NULL_VALUE> 2078677 yoeD 5625568 yoeD Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 2078549 R 511145 CDS b4538 1450273 2078746..2078931 1 NC_000913.3 pseudogene, CP4-44 putative prophage remnant;Phage or Prophage Related; <NULL_VALUE> 2078931 yoeF 1450273 yoeF Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 2078746 D 511145 CDS NP_416511.4 145698283 946541 complement(2079032..2079361) 1 NC_000913.3 putative alpha helix protein; UPF0265 family protein 2079361 yeeX 946541 yeeX Escherichia coli str. K-12 substr. MG1655 UPF0265 family protein NP_416511.4 2079032 R 511145 CDS NP_416512.1 16129949 946545 complement(2079533..2080591) 1 NC_000913.3 putative transporter, FUSC family inner membrane protein 2080591 yeeA 946545 yeeA Escherichia coli str. K-12 substr. MG1655 putative transporter, FUSC family inner membrane protein NP_416512.1 2079533 R 511145 CDS NP_416513.1 16129950 946546 complement(2080789..2081262) 1 NC_000913.3 SbmC protein; DNA gyrase inhibitor 2081262 sbmC 946546 sbmC Escherichia coli str. K-12 substr. MG1655 DNA gyrase inhibitor NP_416513.1 2080789 R 511145 CDS NP_416514.4 162135904 946518 complement(2081381..2082547) 1 NC_000913.3 penicillin binding protein 6b; D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6b) 2082547 dacD 946518 dacD Escherichia coli str. K-12 substr. MG1655 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6b) NP_416514.4 2081381 R 511145 CDS NP_416515.1 16129952 946529 2082756..2084183 1 NC_000913.3 exonuclease I, 3' --> 5' specific; deoxyribophosphodiesterase; exodeoxyribonuclease I; exonuclease I 2084183 sbcB 946529 sbcB Escherichia coli str. K-12 substr. MG1655 exodeoxyribonuclease I; exonuclease I NP_416515.1 2082756 D 511145 CDS NP_416516.1 16129953 946539 complement(2084226..2084453) 1 NC_000913.3 putative TusA family sulfurtransferase 2084453 yeeD 946539 yeeD Escherichia coli str. K-12 substr. MG1655 putative TusA family sulfurtransferase NP_416516.1 2084226 R 511145 CDS NP_416517.1 16129954 946526 complement(2084467..2085525) 1 NC_000913.3 putative transport system permease protein; UPF0394 family inner membrane protein 2085525 yeeE 946526 yeeE Escherichia coli str. K-12 substr. MG1655 UPF0394 family inner membrane protein NP_416517.1 2084467 R 511145 CDS NP_416518.2 90111370 946533 complement(2085704..2087062) 1 NC_000913.3 putative amino acid/amine transport protein; putrescine importer, low affinity 2087062 plaP 946533 plaP Escherichia coli str. K-12 substr. MG1655 putrescine importer, low affinity NP_416518.2 2085704 R 511145 CDS YP_002791246.1 226524728 7751643 complement(2087052..2087114) 1 NC_000913.3 uncharacterized protein 2087114 yoeI 7751643 yoeI Escherichia coli str. K-12 substr. MG1655 uncharacterized protein YP_002791246.1 2087052 R 511145 CDS NP_416519.4 90111371 946532 complement(2087329..2088258) 1 NC_000913.3 putative transcriptional regulator LYSR-type; LysR family putative transcriptional regulator 2088258 yeeY 946532 yeeY Escherichia coli str. K-12 substr. MG1655 LysR family putative transcriptional regulator NP_416519.4 2087329 R 511145 CDS NP_416520.1 16129957 946538 complement(2088304..2089128) 1 NC_000913.3 putative enzyme of sugar metabolism; putative epimerase 2089128 yeeZ 946538 yeeZ Escherichia coli str. K-12 substr. MG1655 putative epimerase NP_416520.1 2088304 R 511145 CDS YP_588458.1 94541116 1450274 complement(2089211..2089465) 1 NC_000913.3 toxin of the YoeB-YefM toxin-antitoxin system 2089465 yoeB 1450274 yoeB Escherichia coli str. K-12 substr. MG1655 toxin of the YoeB-YefM toxin-antitoxin system YP_588458.1 2089211 R 511145 CDS NP_416521.2 90111372 946542 complement(2089462..2089713) 1 NC_000913.3 antitoxin of the YoeB-YefM toxin-antitoxin system 2089713 yefM 946542 yefM Escherichia coli str. K-12 substr. MG1655 antitoxin of the YoeB-YefM toxin-antitoxin system NP_416521.2 2089462 R 511145 CDS NP_416522.1 16129959 946547 2089996..2090046 1 NC_000913.3 his operon leader peptide 2090046 hisL 946547 hisL Escherichia coli str. K-12 substr. MG1655 his operon leader peptide NP_416522.1 2089996 D 511145 CDS NP_416523.1 16129960 946549 2090192..2091091 1 NC_000913.3 ATP phosphoribosyltransferase 2091091 hisG 946549 hisG Escherichia coli str. K-12 substr. MG1655 ATP phosphoribosyltransferase NP_416523.1 2090192 D 511145 CDS NP_416524.1 16129961 946531 2091097..2092401 1 NC_000913.3 L-histidinal:NAD+ oxidoreductase; L-histidinol:NAD+ oxidoreductase; bifunctional histidinal dehydrogenase/ histidinol dehydrogenase 2092401 hisD 946531 hisD Escherichia coli str. K-12 substr. MG1655 bifunctional histidinal dehydrogenase/ histidinol dehydrogenase NP_416524.1 2091097 D 511145 CDS NP_416525.1 16129962 946551 2092398..2093468 1 NC_000913.3 histidinol-phosphate aminotransferase 2093468 hisC 946551 hisC Escherichia coli str. K-12 substr. MG1655 histidinol-phosphate aminotransferase NP_416525.1 2092398 D 511145 CDS NP_416526.4 90111373 946552 2093468..2094535 1 NC_000913.3 imidazoleglycerolphosphate dehydratase and histidinol-phosphate phosphatase; fused histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase 2094535 hisB 946552 hisB Escherichia coli str. K-12 substr. MG1655 fused histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase NP_416526.4 2093468 D 511145 CDS NP_416527.1 16129964 946544 2094535..2095125 1 NC_000913.3 glutamine amidotransferase subunit of heterodimer with HisF = imidazole glycerol phosphate synthase holoenzyme; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit with HisF 2095125 hisH 946544 hisH Escherichia coli str. K-12 substr. MG1655 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit with HisF NP_416527.1 2094535 D 511145 CDS NP_416528.2 90111374 946521 2095125..2095862 1 NC_000913.3 N-(5'-phospho-L-ribosyl-formimino)-5-amino-1- (5'-phosphoribosyl)-4-imidazolecarboxamide isomerase 2095862 hisA 946521 hisA Escherichia coli str. K-12 substr. MG1655 N-(5'-phospho-L-ribosyl-formimino)-5-amino-1- (5'-phosphoribosyl)-4-imidazolecarboxamide isomerase NP_416528.2 2095125 D 511145 CDS NP_416529.1 16129966 946516 2095844..2096620 1 NC_000913.3 imidazole glycerol phosphate synthase subunit in heterodimer with HisH = imidazole glycerol phsphate synthase holoenzyme; imidazole glycerol phosphate synthase, catalytic subunit with HisH 2096620 hisF 946516 hisF Escherichia coli str. K-12 substr. MG1655 imidazole glycerol phosphate synthase, catalytic subunit with HisH NP_416529.1 2095844 D 511145 CDS NP_416530.1 16129967 946515 2096614..2097225 1 NC_000913.3 phosphoribosyl-amp cyclohydrolase; phosphoribosyl-ATP pyrophosphatase; fused phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase 2097225 hisI 946515 hisI Escherichia coli str. K-12 substr. MG1655 fused phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase NP_416530.1 2096614 D 511145 CDS NP_416531.4 90111375 946553 complement(2097321..2098301) 1 NC_000913.3 regulator of length of O-antigen component of lipopolysaccharide chains 2098301 wzzB 946553 wzzB Escherichia coli str. K-12 substr. MG1655 regulator of length of O-antigen component of lipopolysaccharide chains NP_416531.4 2097321 R 511145 CDS NP_416532.1 16129969 946571 complement(2098447..2099613) 1 NC_000913.3 UDP-glucose 6-dehydrogenase 2099613 ugd 946571 ugd Escherichia coli str. K-12 substr. MG1655 UDP-glucose 6-dehydrogenase NP_416532.1 2098447 R 511145 CDS NP_416533.1 16129970 946554 complement(2099862..2101268) 1 NC_000913.3 6-phosphogluconate dehydrogenase, decarboxylating 2101268 gnd 946554 gnd Escherichia coli str. K-12 substr. MG1655 6-phosphogluconate dehydrogenase, decarboxylating NP_416533.1 2099862 R 511145 CDS b4571 4056030 complement(join(2101396..2101744,2102944..2103389)) 1 NC_000913.3 lipopolysaccharide biosynthesis protein, N-ter fragment (pseudogene); <NULL_VALUE> 2103389 wbbL 4056030 wbbL Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 2101396 R 511145 CDS NP_416535.1 16129971 946577 complement(2101895..2102911) 1 NC_000913.3 IS5 transposase and trans-activator 2102911 insH1 946577 insH1 Escherichia coli str. K-12 substr. MG1655 IS5 transposase and trans-activator NP_416535.1 2101895 R 511145 CDS NP_416536.1 16129972 946555 complement(2103391..2104509) 1 NC_000913.3 putative glucose transferase; lipopolysaccharide biosynthesis protein 2104509 wbbK 946555 wbbK Escherichia coli str. K-12 substr. MG1655 lipopolysaccharide biosynthesis protein NP_416536.1 2103391 R 511145 CDS NP_416537.1 16129973 946556 complement(2104494..2105084) 1 NC_000913.3 putative O-acetyl transferase; putative lipopolysaccharide biosynthesis O-acetyl transferase 2105084 wbbJ 946556 wbbJ Escherichia coli str. K-12 substr. MG1655 putative lipopolysaccharide biosynthesis O-acetyl transferase NP_416537.1 2104494 R 511145 CDS NP_416538.1 16129974 947041 complement(2105065..2106057) 1 NC_000913.3 putative Galf transferase; d-Galf:alpha-d-Glc beta-1,6-galactofuranosyltransferase 2106057 wbbI 947041 wbbI Escherichia coli str. K-12 substr. MG1655 d-Galf:alpha-d-Glc beta-1,6-galactofuranosyltransferase NP_416538.1 2105065 R 511145 CDS NP_416539.1 16129975 945179 complement(2106060..2107226) 1 NC_000913.3 O-antigen polymerase 2107226 wbbH 945179 wbbH Escherichia coli str. K-12 substr. MG1655 O-antigen polymerase NP_416539.1 2106060 R 511145 CDS NP_416540.1 16129976 945235 complement(2107226..2108329) 1 NC_000913.3 UDP-galactopyranose mutase; UDP-galactopyranose mutase, FAD/NAD(P)-binding 2108329 glf 945235 glf Escherichia coli str. K-12 substr. MG1655 UDP-galactopyranose mutase, FAD/NAD(P)-binding NP_416540.1 2107226 R 511145 CDS NP_416541.1 16129977 946557 complement(2108337..2109584) 1 NC_000913.3 putative O-antigen transporter; putative polisoprenol-linked O-antigen transporter 2109584 wzxB 946557 wzxB Escherichia coli str. K-12 substr. MG1655 putative polisoprenol-linked O-antigen transporter NP_416541.1 2108337 R 511145 CDS NP_416542.1 16129978 947482 complement(2109581..2110138) 1 NC_000913.3 dTDP-6-deoxy-D-glucose-3,5 epimerase; dTDP-4-deoxyrhamnose-3,5-epimerase 2110138 rfbC 947482 rfbC Escherichia coli str. K-12 substr. MG1655 dTDP-4-deoxyrhamnose-3,5-epimerase NP_416542.1 2109581 R 511145 CDS NP_416543.1 16129979 945154 complement(2110138..2111019) 1 NC_000913.3 dTDP-glucose pyrophosphorylase; glucose-1-phosphate thymidylyltransferase 2111019 rfbA 945154 rfbA Escherichia coli str. K-12 substr. MG1655 glucose-1-phosphate thymidylyltransferase NP_416543.1 2110138 R 511145 CDS NP_416544.1 16129980 947117 complement(2111077..2111976) 1 NC_000913.3 dTDP-6-deoxy-L-mannose-dehydrogenase; dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of dTDP-L-rhamnose synthase 2111976 rfbD 947117 rfbD Escherichia coli str. K-12 substr. MG1655 dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of dTDP-L-rhamnose synthase NP_416544.1 2111077 R 511145 CDS NP_416545.1 16129981 945276 complement(2111976..2113061) 1 NC_000913.3 dTDP-glucose 4,6 dehydratase; dTDP-glucose 4,6 dehydratase, NAD(P)-binding 2113061 rfbB 945276 rfbB Escherichia coli str. K-12 substr. MG1655 dTDP-glucose 4,6 dehydratase, NAD(P)-binding NP_416545.1 2111976 R 511145 CDS NP_416546.1 16129982 946560 complement(2113434..2114327) 1 NC_000913.3 putative regulatory subunit for GalU 2114327 wcaN 946560 wcaN Escherichia coli str. K-12 substr. MG1655 putative regulatory subunit for GalU NP_416546.1 2113434 R 511145 CDS NP_416547.1 16129983 946561 complement(2114502..2115896) 1 NC_000913.3 putative colanic acid biosynthesis protein; colanic acid biosynthesis protein 2115896 wcaM 946561 wcaM Escherichia coli str. K-12 substr. MG1655 colanic acid biosynthesis protein NP_416547.1 2114502 R 511145 CDS NP_416548.1 16129984 946565 complement(2115907..2117127) 1 NC_000913.3 putative colanic acid biosynthesis glycosyl transferase; putative glycosyl transferase 2117127 wcaL 946565 wcaL Escherichia coli str. K-12 substr. MG1655 putative glycosyl transferase NP_416548.1 2115907 R 511145 CDS NP_416549.1 16129985 946569 complement(2117124..2118404) 1 NC_000913.3 putative galactokinase; colanic acid biosynthesis protein 2118404 wcaK 946569 wcaK Escherichia coli str. K-12 substr. MG1655 colanic acid biosynthesis protein NP_416549.1 2117124 R 511145 CDS NP_416550.1 16129986 946581 complement(2118680..2120158) 1 NC_000913.3 probable export protein; putative colanic acid exporter 2120158 wzxC 946581 wzxC Escherichia coli str. K-12 substr. MG1655 putative colanic acid exporter NP_416550.1 2118680 R 511145 CDS NP_416551.1 16129987 946583 complement(2120160..2121554) 1 NC_000913.3 putative UDP-glucose lipid carrier transferase; colanic biosynthesis UDP-glucose lipid carrier transferase 2121554 wcaJ 946583 wcaJ Escherichia coli str. K-12 substr. MG1655 colanic biosynthesis UDP-glucose lipid carrier transferase NP_416551.1 2120160 R 511145 CDS NP_416552.1 16129988 946574 complement(2121609..2122979) 1 NC_000913.3 phosphomannomutase 2122979 cpsG 946574 cpsG Escherichia coli str. K-12 substr. MG1655 phosphomannomutase NP_416552.1 2121609 R 511145 CDS NP_416553.1 16129989 946580 complement(2123084..2124520) 1 NC_000913.3 mannose-1-phosphate guanyltransferase 2124520 cpsB 946580 cpsB Escherichia coli str. K-12 substr. MG1655 mannose-1-phosphate guanyltransferase NP_416553.1 2123084 R 511145 CDS NP_416554.1 16129990 946588 complement(2124523..2125746) 1 NC_000913.3 putative colanic biosynthesis glycosyl transferase; putative glycosyl transferase 2125746 wcaI 946588 wcaI Escherichia coli str. K-12 substr. MG1655 putative glycosyl transferase NP_416554.1 2124523 R 511145 CDS NP_416555.2 90111376 946559 complement(2125743..2126222) 1 NC_000913.3 GDP-mannose mannosyl hydrolase 2126222 wcaH 946559 wcaH Escherichia coli str. K-12 substr. MG1655 GDP-mannose mannosyl hydrolase NP_416555.2 2125743 R 511145 CDS NP_416556.1 16129992 946563 complement(2126225..2127190) 1 NC_000913.3 bifunctional GDP-fucose synthetase: GDP-4-dehydro-6-deoxy-D-mannose epimerase/ GDP-4-dehydro-6-L-deoxygalactose reductase 2127190 wcaG 946563 wcaG Escherichia coli str. K-12 substr. MG1655 bifunctional GDP-fucose synthetase: GDP-4-dehydro-6-deoxy-D-mannose epimerase/ GDP-4-dehydro-6-L-deoxygalactose reductase NP_416556.1 2126225 R 511145 CDS NP_416557.1 16129993 946562 complement(2127193..2128314) 1 NC_000913.3 GDP-D-mannose dehydratase, NAD(P)-binding 2128314 gmd 946562 gmd Escherichia coli str. K-12 substr. MG1655 GDP-D-mannose dehydratase, NAD(P)-binding NP_416557.1 2127193 R 511145 CDS NP_416558.1 16129994 946578 complement(2128340..2128888) 1 NC_000913.3 putative transferase; putative acyl transferase 2128888 wcaF 946578 wcaF Escherichia coli str. K-12 substr. MG1655 putative acyl transferase NP_416558.1 2128340 R 511145 CDS NP_416559.1 16129995 946543 complement(2128904..2129650) 1 NC_000913.3 putative colanic acid biosynthesis glycosyl transferase; putative glycosyl transferase 2129650 wcaE 946543 wcaE Escherichia coli str. K-12 substr. MG1655 putative glycosyl transferase NP_416559.1 2128904 R 511145 CDS NP_416560.1 16129996 946550 complement(2129661..2130878) 1 NC_000913.3 putative colanic acid polymerase 2130878 wcaD 946550 wcaD Escherichia coli str. K-12 substr. MG1655 putative colanic acid polymerase NP_416560.1 2129661 R 511145 CDS NP_416561.1 16129997 946579 complement(2130853..2132070) 1 NC_000913.3 putative glycosyl transferase 2132070 wcaC 946579 wcaC Escherichia coli str. K-12 substr. MG1655 putative glycosyl transferase NP_416561.1 2130853 R 511145 CDS NP_416562.1 16129998 946573 complement(2132067..2132555) 1 NC_000913.3 putative transferase; putative acyl transferase 2132555 wcaB 946573 wcaB Escherichia coli str. K-12 substr. MG1655 putative acyl transferase NP_416562.1 2132067 R 511145 CDS NP_416563.1 16129999 946570 complement(2132558..2133397) 1 NC_000913.3 putative regulator; putative glycosyl transferase 2133397 wcaA 946570 wcaA Escherichia coli str. K-12 substr. MG1655 putative glycosyl transferase NP_416563.1 2132558 R 511145 CDS NP_416564.4 90111377 946567 complement(2133490..2135652) 1 NC_000913.3 colanic acid production tyrosine-protein kinase; autokinase; Ugd phosphorylase 2135652 wzc 946567 wzc Escherichia coli str. K-12 substr. MG1655 colanic acid production tyrosine-protein kinase; autokinase; Ugd phosphorylase NP_416564.4 2133490 R 511145 CDS NP_416565.1 16130001 946564 complement(2135655..2136098) 1 NC_000913.3 low molecular weight protein-tyrosine-phosphatase; colanic acid production protein-tyrosine-phosphatase; Wzc-P dephosphorylase 2136098 wzb 946564 wzb Escherichia coli str. K-12 substr. MG1655 colanic acid production protein-tyrosine-phosphatase; Wzc-P dephosphorylase NP_416565.1 2135655 R 511145 CDS NP_416566.1 16130002 946558 complement(2136104..2137243) 1 NC_000913.3 putative polysaccharide export protein; colanic acid export protein; outer membrane auxillary lipoprotein 2137243 wza 946558 wza Escherichia coli str. K-12 substr. MG1655 colanic acid export protein; outer membrane auxillary lipoprotein NP_416566.1 2136104 R 511145 CDS NP_416567.4 90111378 946566 2137902..2139485 1 NC_000913.3 putative transport protein; inner membrane protein 2139485 yegH 946566 yegH Escherichia coli str. K-12 substr. MG1655 inner membrane protein NP_416567.4 2137902 D 511145 CDS NP_416568.1 16130004 946582 complement(2139759..2141612) 1 NC_000913.3 suppressor of ompF assembly mutants; suppressor of OmpF assembly mutants; putative outer membrane protein assembly factor; inner membrane-anchored periplasmic protein 2141612 asmA 946582 asmA Escherichia coli str. K-12 substr. MG1655 suppressor of OmpF assembly mutants; putative outer membrane protein assembly factor; inner membrane-anchored periplasmic protein NP_416568.1 2139759 R 511145 CDS NP_416569.1 16130005 946593 complement(2141634..2142215) 1 NC_000913.3 2'-deoxycytidine 5'-triphosphate deaminase 2142215 dcd 946593 dcd Escherichia coli str. K-12 substr. MG1655 2'-deoxycytidine 5'-triphosphate deaminase NP_416569.1 2141634 R 511145 CDS NP_416570.2 90111379 946597 complement(2142307..2142948) 1 NC_000913.3 uridine/cytidine kinase 2142948 udk 946597 udk Escherichia coli str. K-12 substr. MG1655 uridine/cytidine kinase NP_416570.2 2142307 R 511145 CDS NP_416571.1 16130007 946600 2143266..2146583 1 NC_000913.3 putative sensor-type protein; putative diguanylate cyclase 2146583 yegE 946600 yegE Escherichia coli str. K-12 substr. MG1655 putative diguanylate cyclase NP_416571.1 2143266 D 511145 CDS NP_416572.1 16130008 947371 complement(2146692..2147540) 1 NC_000913.3 3-methyl-adenine DNA glycosylase II, inducible; 3-methyl-adenine DNA glycosylase II 2147540 alkA 947371 alkA Escherichia coli str. K-12 substr. MG1655 3-methyl-adenine DNA glycosylase II NP_416572.1 2146692 R 511145 CDS NP_416573.4 90111380 947234 2147674..2149026 1 NC_000913.3 putative heat shock protein; Hsp70 chaperone family protein 2149026 yegD 947234 yegD Escherichia coli str. K-12 substr. MG1655 Hsp70 chaperone family protein NP_416573.4 2147674 D 511145 CDS NP_416574.1 16130010 947159 complement(2149039..2150985) 1 NC_000913.3 putative chaperonin; protein kinase-related putative non-specific DNA-binding protein 2150985 yegI 947159 yegI Escherichia coli str. K-12 substr. MG1655 protein kinase-related putative non-specific DNA-binding protein NP_416574.1 2149039 R 511145 CDS NP_416575.1 16130011 947201 2151185..2151646 1 NC_000913.3 uncharacterized protein 2151646 yegJ 947201 yegJ Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_416575.1 2151185 D 511145 CDS NP_416576.1 16130012 947269 complement(2151711..2152472) 1 NC_000913.3 ser/thr phosphatase-related protein 2152472 yegK 947269 yegK Escherichia coli str. K-12 substr. MG1655 ser/thr phosphatase-related protein NP_416576.1 2151711 R 511145 CDS NP_416577.1 16130013 946602 complement(2152469..2153128) 1 NC_000913.3 VMA domain protein 2153128 yegL 946602 yegL Escherichia coli str. K-12 substr. MG1655 VMA domain protein NP_416577.1 2152469 R 511145 CDS YP_002791247.1 226524729 7751625 complement(2153349..2153408) 1 NC_000913.3 toxic membrane protein 2153408 ibsA 7751625 ibsA Escherichia coli str. K-12 substr. MG1655 toxic membrane protein YP_002791247.1 2153349 R 511145 CDS YP_002791248.1 226524730 7751626 complement(2153681..2153737) 1 NC_000913.3 toxic membrane protein 2153737 ibsB 7751626 ibsB Escherichia coli str. K-12 substr. MG1655 toxic membrane protein YP_002791248.1 2153681 R 511145 CDS NP_416578.2 90111381 946604 2154016..2155263 1 NC_000913.3 putative membrane protein; multidrug efflux system, subunit A 2155263 mdtA 946604 mdtA Escherichia coli str. K-12 substr. MG1655 multidrug efflux system, subunit A NP_416578.2 2154016 D 511145 CDS NP_416579.1 16130015 946606 2155263..2158385 1 NC_000913.3 multidrug efflux system, subunit B 2158385 mdtB 946606 mdtB Escherichia coli str. K-12 substr. MG1655 multidrug efflux system, subunit B NP_416579.1 2155263 D 511145 CDS NP_416580.1 16130016 946608 2158386..2161463 1 NC_000913.3 multidrug efflux system, subunit C 2161463 mdtC 946608 mdtC Escherichia coli str. K-12 substr. MG1655 multidrug efflux system, subunit C NP_416580.1 2158386 D 511145 CDS NP_416581.1 16130017 946601 2161464..2162879 1 NC_000913.3 putative transport protein; putative arabinose efflux transporter 2162879 mdtD 946601 mdtD Escherichia coli str. K-12 substr. MG1655 putative arabinose efflux transporter NP_416581.1 2161464 D 511145 CDS NP_416582.1 16130018 946611 2162876..2164279 1 NC_000913.3 sensor protein (for BaeR); sensory histidine kinase in two-component regulatory system with BaeR 2164279 baeS 946611 baeS Escherichia coli str. K-12 substr. MG1655 sensory histidine kinase in two-component regulatory system with BaeR NP_416582.1 2162876 D 511145 CDS NP_416583.1 16130019 946605 2164276..2164998 1 NC_000913.3 transcriptional response regulatory protein (sensor BaeS); response regulator in two-component regulatory system with BaeS 2164998 baeR 946605 baeR Escherichia coli str. K-12 substr. MG1655 response regulator in two-component regulatory system with BaeS NP_416583.1 2164276 D 511145 CDS NP_416584.4 90111382 947095 2165189..2165521 1 NC_000913.3 UPF0339 family protein 2165521 yegP 947095 yegP Escherichia coli str. K-12 substr. MG1655 UPF0339 family protein NP_416584.4 2165189 D 511145 CDS NP_416585.1 16130021 946609 2165668..2167029 1 NC_000913.3 putative peptidase 2167029 yegQ 946609 yegQ Escherichia coli str. K-12 substr. MG1655 putative peptidase NP_416585.1 2165668 D 511145 CDS NP_416586.1 16130022 945404 complement(2167302..2167520) 1 NC_000913.3 prophage P2 ogr protein; positive regulator of P2 growth (insertion of P2 ogr gene into the chromosome) 2167520 ogrK 945404 ogrK Escherichia coli str. K-12 substr. MG1655 positive regulator of P2 growth (insertion of P2 ogr gene into the chromosome) NP_416586.1 2167302 R 511145 CDS b2083 949050 complement(2167602..2167814) 1 NC_000913.3 pseudogene, gpD phage P2-like protein D; <NULL_VALUE> 2167814 yegZ 949050 yegZ Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 2167602 R 511145 CDS NP_416589.2 90111383 946613 complement(2167989..2168306) 1 NC_000913.3 uncharacterized protein 2168306 yegR 946613 yegR Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_416589.2 2167989 R 511145 CDS NP_416590.1 16130026 946626 2168712..2169611 1 NC_000913.3 phosphatidylglycerol kinase, metal-dependent 2169611 yegS 946626 yegS Escherichia coli str. K-12 substr. MG1655 phosphatidylglycerol kinase, metal-dependent NP_416590.1 2168712 D 511145 CDS b4498 2847672 complement(join(2169693..2170167,2171429..2171727)) 1 NC_000913.3 pseudogene, repressor for gat operon; interrupted by IS3; split galactitol utilization operon repressor, fragment 2; split galactitol utilization operon repressor, interrupted; <NULL_VALUE> 2171727 gatR 2847672 gatR Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 2169693 R 511145 CDS NP_416592.2 226524731 946616 2170236..2170535 1 NC_000913.3 IS3 transposase A 2170535 insE1 946616 insE1 Escherichia coli str. K-12 substr. MG1655 IS3 transposase A NP_416592.2 2170236 D 511145 CDS NP_416593.1 16130028 946629 2170532..2171398 1 NC_000913.3 IS3 transposase B 2171398 insF1 946629 insF1 Escherichia coli str. K-12 substr. MG1655 IS3 transposase B NP_416593.1 2170532 D 511145 CDS NP_416594.1 16130029 946598 complement(2171833..2172873) 1 NC_000913.3 galactitol-1-phosphate dehydrogenase; galactitol-1-phosphate dehydrogenase, Zn-dependent and NAD(P)-binding 2172873 gatD 946598 gatD Escherichia coli str. K-12 substr. MG1655 galactitol-1-phosphate dehydrogenase, Zn-dependent and NAD(P)-binding NP_416594.1 2171833 R 511145 CDS b2092 946603 complement(join(2172921..2173362,2173365..2174278)) 1 NC_000913.3 pseudogene, galactitol-specific enzyme IIC component of PTS;transport; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system galactitol-specific enzyme IIC; <NULL_VALUE> 2174278 gatC 946603 gatC Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 2172921 R 511145 CDS NP_416596.1 16130031 946610 complement(2174282..2174566) 1 NC_000913.3 galactitol-specific enzyme IIB of phosphotransferase system; galactitol-specific enzyme IIB component of PTS 2174566 gatB 946610 gatB Escherichia coli str. K-12 substr. MG1655 galactitol-specific enzyme IIB component of PTS NP_416596.1 2174282 R 511145 CDS NP_416597.1 16130032 946633 complement(2174597..2175049) 1 NC_000913.3 galactitol-specific enzyme IIA of phosphotransferase system; galactitol-specific enzyme IIA component of PTS 2175049 gatA 946633 gatA Escherichia coli str. K-12 substr. MG1655 galactitol-specific enzyme IIA component of PTS NP_416597.1 2174597 R 511145 CDS NP_416598.1 16130033 946641 complement(2175059..2176321) 1 NC_000913.3 putative tagatose 6-phosphate kinase 1; D-tagatose 1,6-bisphosphate aldolase 2, subunit 2176321 gatZ 946641 gatZ Escherichia coli str. K-12 substr. MG1655 D-tagatose 1,6-bisphosphate aldolase 2, subunit NP_416598.1 2175059 R 511145 CDS NP_416599.2 90111384 946636 complement(2176350..2177204) 1 NC_000913.3 tagatose-bisphosphate aldolase 1; D-tagatose 1,6-bisphosphate aldolase 2, catalytic subunit 2177204 gatY 946636 gatY Escherichia coli str. K-12 substr. MG1655 D-tagatose 1,6-bisphosphate aldolase 2, catalytic subunit NP_416599.2 2176350 R 511145 CDS NP_416600.4 90111385 946632 complement(2177512..2178564) 1 NC_000913.3 fructose-bisphosphate aldolase class I 2178564 fbaB 946632 fbaB Escherichia coli str. K-12 substr. MG1655 fructose-bisphosphate aldolase class I NP_416600.4 2177512 R 511145 CDS NP_416601.1 16130036 946638 2178821..2180098 1 NC_000913.3 putative nucleoside permease protein; nucleoside transporter, low affinity 2180098 yegT 946638 yegT Escherichia coli str. K-12 substr. MG1655 nucleoside transporter, low affinity NP_416601.1 2178821 D 511145 CDS NP_416602.1 16130037 946630 2180095..2181099 1 NC_000913.3 ADP-ribosylglycohydrolase family protein 2181099 yegU 946630 yegU Escherichia coli str. K-12 substr. MG1655 ADP-ribosylglycohydrolase family protein NP_416602.1 2180095 D 511145 CDS NP_416603.1 16130038 946637 2181096..2182061 1 NC_000913.3 putative kinase 2182061 yegV 946637 yegV Escherichia coli str. K-12 substr. MG1655 putative kinase NP_416603.1 2181096 D 511145 CDS NP_416604.1 16130039 946639 complement(2182035..2182781) 1 NC_000913.3 putative transcriptional regulator; putative DNA-binding transcriptional regulator 2182781 yegW 946639 yegW Escherichia coli str. K-12 substr. MG1655 putative DNA-binding transcriptional regulator NP_416604.1 2182035 R 511145 CDS NP_416605.2 90111386 945543 complement(2182833..2183651) 1 NC_000913.3 putative family 25 glycosyl hydrolase 2183651 yegX 945543 yegX Escherichia coli str. K-12 substr. MG1655 putative family 25 glycosyl hydrolase NP_416605.2 2182833 R 511145 CDS NP_416606.1 16130041 946459 complement(2183716..2184516) 1 NC_000913.3 phosphomethylpyrimidine kinase; bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase 2184516 thiD 946459 thiD Escherichia coli str. K-12 substr. MG1655 bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase NP_416606.1 2183716 R 511145 CDS NP_416607.1 16130042 945142 complement(2184513..2185301) 1 NC_000913.3 hydoxyethylthiazole kinase 2185301 thiM 945142 thiM Escherichia coli str. K-12 substr. MG1655 hydoxyethylthiazole kinase NP_416607.1 2184513 R 511145 CDS NP_416608.1 16130043 947114 complement(2185524..2185796) 1 NC_000913.3 transcriptional repressor of rcnA 2185796 rcnR 947114 rcnR Escherichia coli str. K-12 substr. MG1655 transcriptional repressor of rcnA NP_416608.1 2185524 R 511145 CDS NP_416609.1 16130044 949078 2185917..2186741 1 NC_000913.3 membrane protein conferring nickel and cobalt resistance 2186741 rcnA 949078 rcnA Escherichia coli str. K-12 substr. MG1655 membrane protein conferring nickel and cobalt resistance NP_416609.1 2185917 D 511145 CDS NP_416610.4 90111387 949080 2186960..2187298 1 NC_000913.3 periplasmic modulator of Ni and Co efflux 2187298 rcnB 949080 rcnB Escherichia coli str. K-12 substr. MG1655 periplasmic modulator of Ni and Co efflux NP_416610.4 2186960 D 511145 CDS NP_416611.1 16130046 946642 complement(2187380..2188414) 1 NC_000913.3 putative type-1 fimbrial protein; putative fimbrial-like adhesin protein 2188414 yehA 946642 yehA Escherichia coli str. K-12 substr. MG1655 putative fimbrial-like adhesin protein NP_416611.1 2187380 R 511145 CDS NP_416612.1 16130047 946617 complement(2188430..2190910) 1 NC_000913.3 putative outer membrane protein 2190910 yehB 946617 yehB Escherichia coli str. K-12 substr. MG1655 putative outer membrane protein NP_416612.1 2188430 R 511145 CDS NP_416613.1 16130048 946621 complement(2190926..2191645) 1 NC_000913.3 putative chaperone; putative periplasmic pilin chaperone 2191645 yehC 946621 yehC Escherichia coli str. K-12 substr. MG1655 putative periplasmic pilin chaperone NP_416613.1 2190926 R 511145 CDS NP_416614.1 16130049 946619 complement(2191680..2192222) 1 NC_000913.3 putative fimbrial-like protein; putative fimbrial-like adhesin protein 2192222 yehD 946619 yehD Escherichia coli str. K-12 substr. MG1655 putative fimbrial-like adhesin protein NP_416614.1 2191680 R 511145 CDS NP_416615.1 16130050 946615 complement(2192515..2192796) 1 NC_000913.3 DUF2574 family protein 2192796 yehE 946615 yehE Escherichia coli str. K-12 substr. MG1655 DUF2574 family protein NP_416615.1 2192515 R 511145 CDS NP_416616.4 90111388 946627 complement(2193059..2194168) 1 NC_000913.3 putative ATPase; antiporter inner membrane protein 2194168 mrp 946627 mrp Escherichia coli str. K-12 substr. MG1655 antiporter inner membrane protein NP_416616.4 2193059 R 511145 CDS NP_416617.1 16130052 946643 2194300..2196333 1 NC_000913.3 methionine tRNA synthetase; methionyl-tRNA synthetase 2196333 metG 946643 metG Escherichia coli str. K-12 substr. MG1655 methionyl-tRNA synthetase NP_416617.1 2194300 D 511145 CDS b4499 2847726 join(2196474..2199320,2199322..2200269) 1 NC_000913.3 DUF4132 family pseudogene; defective yehI paralog; molybdate metabolism regulator, first fragment; molybdate metabolism regulator, second fragment 2; yehI' molR mutations have phenotypes and the N-terminal molR fragment of yehI' may be expressed and may have retained or evolved MolR function; <NULL_VALUE> 2200269 yehH 2847726 yehH Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 2196474 D 511145 CDS NP_416621.1 16130056 946649 2200279..2203911 1 NC_000913.3 putative regulator; DUF4132 domain-containing protein 2203911 yehI 946649 yehI Escherichia coli str. K-12 substr. MG1655 DUF4132 domain-containing protein NP_416621.1 2200279 D 511145 CDS YP_588459.1 94541136 4056035 2203972..2204289 1 NC_000913.3 uncharacterized protein 2204289 yehK 4056035 yehK Escherichia coli str. K-12 substr. MG1655 uncharacterized protein YP_588459.1 2203972 D 511145 CDS NP_416623.2 90111389 946656 2204596..2205684 1 NC_000913.3 putative ABC superfamily transporter ATP-binding subunit 2205684 yehL 946656 yehL Escherichia coli str. K-12 substr. MG1655 putative ABC superfamily transporter ATP-binding subunit NP_416623.2 2204596 D 511145 CDS NP_416624.1 16130058 946651 2205695..2207974 1 NC_000913.3 uncharacterized protein 2207974 yehM 946651 yehM Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_416624.1 2205695 D 511145 CDS NP_416625.1 16130059 946652 2207967..2209103 1 NC_000913.3 VMA domain putative YehL ATPase stimulator 2209103 yehP 946652 yehP Escherichia coli str. K-12 substr. MG1655 VMA domain putative YehL ATPase stimulator NP_416625.1 2207967 D 511145 CDS b2122 946654 2209100..2211100 1 NC_000913.3 pseudogene; <NULL_VALUE> 2211100 yehQ 946654 yehQ Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 2209100 D 511145 CDS NP_416627.2 90111391 949023 2211225..2211686 1 NC_000913.3 lipoprotein, DUF1307 family 2211686 yehR 949023 yehR Escherichia coli str. K-12 substr. MG1655 lipoprotein, DUF1307 family NP_416627.2 2211225 D 511145 CDS NP_416628.1 16130062 949026 complement(2211726..2212196) 1 NC_000913.3 DUF1456 family protein 2212196 yehS 949026 yehS Escherichia coli str. K-12 substr. MG1655 DUF1456 family protein NP_416628.1 2211726 R 511145 CDS NP_416629.4 90111392 949024 complement(2212243..2212962) 1 NC_000913.3 putative response regulator in two-component system withYehU 2212962 yehT 949024 yehT Escherichia coli str. K-12 substr. MG1655 putative response regulator in two-component system withYehU NP_416629.4 2212243 R 511145 CDS NP_416630.1 16130064 949027 complement(2212959..2214644) 1 NC_000913.3 putative 2-component sensor protein; inner membrane putative sensory kinase in two-component system with YehT 2214644 yehU 949027 yehU Escherichia coli str. K-12 substr. MG1655 inner membrane putative sensory kinase in two-component system with YehT NP_416630.1 2212959 R 511145 CDS NP_416631.1 16130065 949029 2214866..2215597 1 NC_000913.3 putative transcriptional regulator; transcriptional activator of csgD and csgBA 2215597 mlrA 949029 mlrA Escherichia coli str. K-12 substr. MG1655 transcriptional activator of csgD and csgBA NP_416631.1 2214866 D 511145 CDS YP_588460.1 94541117 1450279 2215657..2215764 1 NC_000913.3 putative membrane protein 2215764 yohO 1450279 yohO Escherichia coli str. K-12 substr. MG1655 putative membrane protein YP_588460.1 2215657 D 511145 CDS NP_416632.1 16130066 949028 complement(2215745..2216476) 1 NC_000913.3 putative transport system permease protein; inner membrane putative ABC superfamily transporter permease 2216476 yehW 949028 yehW Escherichia coli str. K-12 substr. MG1655 inner membrane putative ABC superfamily transporter permease NP_416632.1 2215745 R 511145 CDS NP_416633.1 16130067 946659 complement(2216481..2217407) 1 NC_000913.3 putative ATP-binding component of a transport system; putative ABC superfamily transporter ATP-binding subunit 2217407 yehX 946659 yehX Escherichia coli str. K-12 substr. MG1655 putative ABC superfamily transporter ATP-binding subunit NP_416633.1 2216481 R 511145 CDS NP_416634.1 16130068 946660 complement(2217400..2218557) 1 NC_000913.3 putative transport system permease protein; inner membrane putative ABC superfamily transporter permease 2218557 yehY 946660 yehY Escherichia coli str. K-12 substr. MG1655 inner membrane putative ABC superfamily transporter permease NP_416634.1 2217400 R 511145 CDS NP_416635.1 16130069 946681 complement(2218564..2219481) 1 NC_000913.3 putative transport system permease protein; putative ABC superfamily transporter periplasmic-binding protein 2219481 osmF 946681 osmF Escherichia coli str. K-12 substr. MG1655 putative ABC superfamily transporter periplasmic-binding protein NP_416635.1 2218564 R 511145 CDS NP_416636.1 16130070 946682 complement(2219692..2221989) 1 NC_000913.3 beta-D-glucoside glucohydrolase, periplasmic 2221989 bglX 946682 bglX Escherichia coli str. K-12 substr. MG1655 beta-D-glucoside glucohydrolase, periplasmic NP_416636.1 2219692 R 511145 CDS NP_416637.1 16130071 946653 2222185..2223900 1 NC_000913.3 D-lactate dehydrogenase, FAD protein, NADH independent; D-lactate dehydrogenase, FAD-binding, NADH independent 2223900 dld 946653 dld Escherichia coli str. K-12 substr. MG1655 D-lactate dehydrogenase, FAD-binding, NADH independent NP_416637.1 2222185 D 511145 CDS NP_416638.4 162135905 946662 complement(2223938..2224870) 1 NC_000913.3 penicillin-binding protein 7; D-alanyl-D-alanine endopeptidase 2224870 pbpG 946662 pbpG Escherichia coli str. K-12 substr. MG1655 D-alanyl-D-alanine endopeptidase NP_416638.4 2223938 R 511145 CDS NP_416639.2 90111394 946666 complement(2225044..2225631) 1 NC_000913.3 Yip1 family inner membrane protein 2225631 yohC 946666 yohC Escherichia coli str. K-12 substr. MG1655 Yip1 family inner membrane protein NP_416639.2 2225044 R 511145 CDS NP_416640.2 90111395 946661 2225801..2226379 1 NC_000913.3 DedA family inner membrane protein 2226379 yohD 946661 yohD Escherichia coli str. K-12 substr. MG1655 DedA family inner membrane protein NP_416640.2 2225801 D 511145 CDS NP_416641.1 16130075 949126 complement(2226509..2227270) 1 NC_000913.3 putative oxidoreductase 2227270 yohF 949126 yohF Escherichia coli str. K-12 substr. MG1655 putative oxidoreductase NP_416641.1 2226509 R 511145 CDS b2139 949123 complement(join(2227323..2228609,2228609..2228758)) 1 NC_000913.3 pseudogene; putative channel/filament proteins; <NULL_VALUE> 2228758 mdtQ 949123 mdtQ Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 2227323 R 511145 CDS YP_002791249.1 226524732 7751636 2228982..2229065 1 NC_000913.3 uncharacterized protein 2229065 yohP 7751636 yohP Escherichia coli str. K-12 substr. MG1655 uncharacterized protein YP_002791249.1 2228982 D 511145 CDS NP_416645.1 16130078 945458 complement(2229438..2230385) 1 NC_000913.3 putative regulator protein; tRNA-dihydrouridine synthase C 2230385 dusC 945458 dusC Escherichia coli str. K-12 substr. MG1655 tRNA-dihydrouridine synthase C NP_416645.1 2229438 R 511145 CDS NP_416646.1 16130079 949127 2230624..2231022 1 NC_000913.3 UPF0299 family inner membrane protein 2231022 yohJ 949127 yohJ Escherichia coli str. K-12 substr. MG1655 UPF0299 family inner membrane protein NP_416646.1 2230624 D 511145 CDS NP_416647.1 16130080 949125 2231019..2231714 1 NC_000913.3 putative seritonin transporter; LrgB family inner membrane protein 2231714 yohK 949125 yohK Escherichia coli str. K-12 substr. MG1655 LrgB family inner membrane protein NP_416647.1 2231019 D 511145 CDS NP_416648.1 16130081 946663 2231844..2232728 1 NC_000913.3 cytidine/deoxycytidine deaminase 2232728 cdd 946663 cdd Escherichia coli str. K-12 substr. MG1655 cytidine/deoxycytidine deaminase NP_416648.1 2231844 D 511145 CDS NP_416649.1 16130082 949003 2232878..2233597 1 NC_000913.3 vancomycin sensitivity; sanA mutant has a defective envelope more permeable to vancomycin at 42 degrees; vancomycin high temperature exclusion protein, DUF218 superfamily protein 2233597 sanA 949003 sanA Escherichia coli str. K-12 substr. MG1655 vancomycin high temperature exclusion protein, DUF218 superfamily protein NP_416649.1 2232878 D 511145 CDS NP_416650.1 16130083 948983 2233600..2233839 1 NC_000913.3 DUF2542 family protein 2233839 yeiS 948983 yeiS Escherichia coli str. K-12 substr. MG1655 DUF2542 family protein NP_416650.1 2233600 D 511145 CDS NP_416651.1 16130084 949049 2234033..2235271 1 NC_000913.3 putative oxidoreductase; dihydropyrimidine dehydrogenase, NADH-dependent, subunit N 2235271 preT 949049 preT Escherichia coli str. K-12 substr. MG1655 dihydropyrimidine dehydrogenase, NADH-dependent, subunit N NP_416651.1 2234033 D 511145 CDS NP_416652.4 90111398 949037 2235265..2236500 1 NC_000913.3 putative oxidoreductase; dihydropyrimidine dehydrogenase, NADH-dependent, subunit C 2236500 preA 949037 preA Escherichia coli str. K-12 substr. MG1655 dihydropyrimidine dehydrogenase, NADH-dependent, subunit C NP_416652.4 2235265 D 511145 CDS NP_416653.1 16130086 949039 complement(2236743..2237753) 1 NC_000913.3 methyl-galactoside transport and galactose taxis; membrane component of ABC superfamily; methyl-galactoside transporter subunit 2237753 mglC 949039 mglC Escherichia coli str. K-12 substr. MG1655 methyl-galactoside transporter subunit NP_416653.1 2236743 R 511145 CDS NP_416654.1 16130087 949036 complement(2237769..2239289) 1 NC_000913.3 ATP-binding component of methyl-galactoside transport and galactose taxis; fused methyl-galactoside transporter subunits of ABC superfamily: ATP-binding components 2239289 mglA 949036 mglA Escherichia coli str. K-12 substr. MG1655 fused methyl-galactoside transporter subunits of ABC superfamily: ATP-binding components NP_416654.1 2237769 R 511145 CDS NP_416655.1 16130088 949041 complement(2239350..2240348) 1 NC_000913.3 galactose-binding transport protein; receptor for galactose taxis; periplasmic-binding component of ABC superfamily; methyl-galactoside transporter subunit 2240348 mglB 949041 mglB Escherichia coli str. K-12 substr. MG1655 methyl-galactoside transporter subunit NP_416655.1 2239350 R 511145 CDS NP_416656.1 16130089 949043 complement(2240628..2241668) 1 NC_000913.3 mgl repressor, galactose operon inducer; galactose- and fucose-inducible galactose regulon transcriptional isorepressor; mgl operon transcriptional repressor; autorepressor 2241668 galS 949043 galS Escherichia coli str. K-12 substr. MG1655 galactose- and fucose-inducible galactose regulon transcriptional isorepressor; mgl operon transcriptional repressor; autorepressor NP_416656.1 2240628 R 511145 CDS NP_416657.1 16130090 949044 complement(2241810..2242967) 1 NC_000913.3 DUF418 family putative inner membrane protein 2242967 yeiB 949044 yeiB Escherichia coli str. K-12 substr. MG1655 DUF418 family putative inner membrane protein NP_416657.1 2241810 R 511145 CDS NP_416658.1 16130091 949040 complement(2242984..2243652) 1 NC_000913.3 GTP cyclohydrolase I 2243652 folE 949040 folE Escherichia coli str. K-12 substr. MG1655 GTP cyclohydrolase I NP_416658.1 2242984 R 511145 CDS NP_416659.1 16130092 949045 2243910..2244746 1 NC_000913.3 putative esterase; S-formylglutathione hydrolase 2244746 yeiG 949045 yeiG Escherichia coli str. K-12 substr. MG1655 S-formylglutathione hydrolase NP_416659.1 2243910 D 511145 CDS NP_416660.1 16130093 949042 complement(2244778..2246769) 1 NC_000913.3 ferric iron outer membrane transporter, TonB-dependent; surface receptor and translocator for colicin I; colicin IA outer membrane receptor and translocator; ferric iron-catecholate transporter 2246769 cirA 949042 cirA Escherichia coli str. K-12 substr. MG1655 colicin IA outer membrane receptor and translocator; ferric iron-catecholate transporter NP_416660.1 2244778 R 511145 CDS NP_416661.1 16130094 946667 complement(2247063..2248532) 1 NC_000913.3 lysine-specific permease; lysine transporter 2248532 lysP 946667 lysP Escherichia coli str. K-12 substr. MG1655 lysine transporter NP_416661.1 2247063 R 511145 CDS NP_416662.1 16130095 946657 complement(2248737..2249618) 1 NC_000913.3 putative transcriptional regulator LYSR-type; putative DNA-binding transcriptional regulator 2249618 yeiE 946657 yeiE Escherichia coli str. K-12 substr. MG1655 putative DNA-binding transcriptional regulator NP_416662.1 2248737 R 511145 CDS NP_416663.1 16130096 946668 2249717..2250766 1 NC_000913.3 UPF0324 family inner membrane protein 2250766 yeiH 946668 yeiH Escherichia coli str. K-12 substr. MG1655 UPF0324 family inner membrane protein NP_416663.1 2249717 D 511145 CDS NP_416664.1 16130097 946669 2250840..2251697 1 NC_000913.3 endonuclease IV; endonuclease IV with intrinsic 3'-5' exonuclease activity 2251697 nfo 946669 nfo Escherichia coli str. K-12 substr. MG1655 endonuclease IV with intrinsic 3'-5' exonuclease activity NP_416664.1 2250840 D 511145 CDS NP_416665.1 16130098 946640 2251700..2252788 1 NC_000913.3 putative kinase 2252788 yeiI 946640 yeiI Escherichia coli str. K-12 substr. MG1655 putative kinase NP_416665.1 2251700 D 511145 CDS NP_416666.1 16130099 946655 complement(2252895..2254145) 1 NC_000913.3 putative pyrimidine nucleoside transporter; nucleoside permease 2254145 nupX 946655 nupX Escherichia coli str. K-12 substr. MG1655 nucleoside permease NP_416666.1 2252895 R 511145 CDS NP_416667.1 16130100 946646 complement(2254245..2255186) 1 NC_000913.3 ribonucleoside hydrolase 2 2255186 rihB 946646 rihB Escherichia coli str. K-12 substr. MG1655 ribonucleoside hydrolase 2 NP_416667.1 2254245 R 511145 CDS NP_416668.3 49176193 946670 2255355..2256014 1 NC_000913.3 stationary phase nitrogen starvation regulator; putative transcriptional regulator 2256014 yeiL 946670 yeiL Escherichia coli str. K-12 substr. MG1655 putative transcriptional regulator NP_416668.3 2255355 D 511145 CDS NP_416669.1 16130102 946671 complement(2256085..2257335) 1 NC_000913.3 putative transport system permease protein; putative nucleoside transporter 2257335 psuT 946671 psuT Escherichia coli str. K-12 substr. MG1655 putative nucleoside transporter NP_416669.1 2256085 R 511145 CDS NP_416670.1 16130103 946699 complement(2257429..2258367) 1 NC_000913.3 pseudouridine 5'-phosphate glycosidase 2258367 psuG 946699 psuG Escherichia coli str. K-12 substr. MG1655 pseudouridine 5'-phosphate glycosidase NP_416670.1 2257429 R 511145 CDS NP_416671.1 16130104 946664 complement(2258355..2259296) 1 NC_000913.3 putative kinase; pseudouridine kinase 2259296 psuK 946664 psuK Escherichia coli str. K-12 substr. MG1655 pseudouridine kinase NP_416671.1 2258355 R 511145 CDS NP_416672.1 16130105 946672 complement(2259719..2261410) 1 NC_000913.3 PTS system, fructose-specific transport protein; fused fructose-specific PTS enzymes: IIBcomponent/IIC components 2261410 fruA 946672 fruA Escherichia coli str. K-12 substr. MG1655 fused fructose-specific PTS enzymes: IIBcomponent/IIC components NP_416672.1 2259719 R 511145 CDS NP_416673.1 16130106 946676 complement(2261427..2262365) 1 NC_000913.3 fructose-1-phosphate kinase 2262365 fruK 946676 fruK Escherichia coli str. K-12 substr. MG1655 fructose-1-phosphate kinase NP_416673.1 2261427 R 511145 CDS NP_416674.1 16130107 946677 complement(2262365..2263495) 1 NC_000913.3 PTS system, fructose-specific IIA/fpr component; fused fructose-specific PTS enzymes: IIA component/HPr component 2263495 fruB 946677 fruB Escherichia coli str. K-12 substr. MG1655 fused fructose-specific PTS enzymes: IIA component/HPr component NP_416674.1 2262365 R 511145 CDS NP_416675.1 16130108 946673 2263863..2265044 1 NC_000913.3 lactose/glucose efflux system 2265044 setB 946673 setB Escherichia coli str. K-12 substr. MG1655 lactose/glucose efflux system NP_416675.1 2263863 D 511145 CDS YP_588461.1 94541118 4056031 complement(2265041..2265295) 1 NC_000913.3 UPF0153 cysteine cluster protein 2265295 yeiW 4056031 yeiW Escherichia coli str. K-12 substr. MG1655 UPF0153 cysteine cluster protein YP_588461.1 2265041 R 511145 CDS NP_416676.4 90111399 946674 2265450..2266022 1 NC_000913.3 putative elongation factor; elongation factor P-like protein 2266022 yeiP 946674 yeiP Escherichia coli str. K-12 substr. MG1655 elongation factor P-like protein NP_416676.4 2265450 D 511145 CDS NP_416677.1 16130110 946688 2266245..2267711 1 NC_000913.3 putative oxidoreductase; putative NAD-dependent D-mannonate oxidoreductase 2267711 yeiQ 946688 yeiQ Escherichia coli str. K-12 substr. MG1655 putative NAD-dependent D-mannonate oxidoreductase NP_416677.1 2266245 D 511145 CDS NP_416678.1 16130111 946701 2267829..2268815 1 NC_000913.3 Zn-stimulated GTPase involved in zinc homeostasis; mutants are cadmium and EDTA sensitive; Zn(2+) binding protein 2268815 yeiR 946701 yeiR Escherichia coli str. K-12 substr. MG1655 Zn-stimulated GTPase involved in zinc homeostasis; mutants are cadmium and EDTA sensitive; Zn(2+) binding protein NP_416678.1 2267829 D 511145 CDS NP_416679.4 90111400 946693 2268854..2269567 1 NC_000913.3 lipid A 1-diphosphate synthase; undecaprenyl pyrophosphate:lipid A 1-phosphate phosphotransferase 2269567 lpxT 946693 lpxT Escherichia coli str. K-12 substr. MG1655 lipid A 1-diphosphate synthase; undecaprenyl pyrophosphate:lipid A 1-phosphate phosphotransferase NP_416679.4 2268854 D 511145 CDS NP_416680.1 16130113 946686 2269979..2270545 1 NC_000913.3 putative lipoprotein; murein DD-endopeptidase, space-maker hydrolase, mutational suppressor of prc thermosensitivity, outer membrane lipoprotein 2270545 mepS 946686 mepS Escherichia coli str. K-12 substr. MG1655 murein DD-endopeptidase, space-maker hydrolase, mutational suppressor of prc thermosensitivity, outer membrane lipoprotein NP_416680.1 2269979 D 511145 CDS NP_416681.1 16130114 946695 2270726..2272282 1 NC_000913.3 resistance protein for phages lambda and N4, putative membrane-anchored cyclic-di-GMP phosphodiesterase 2272282 rtn 946695 rtn Escherichia coli str. K-12 substr. MG1655 resistance protein for phages lambda and N4, putative membrane-anchored cyclic-di-GMP phosphodiesterase NP_416681.1 2270726 D 511145 CDS NP_416682.4 90111401 946675 2272364..2274178 1 NC_000913.3 periplasmic-binding component of ABC superfamily; microcin C transporter YejABEF, periplasmic binding protein; ABC family 2274178 yejA 946675 yejA Escherichia coli str. K-12 substr. MG1655 microcin C transporter YejABEF, periplasmic binding protein; ABC family NP_416682.4 2272364 D 511145 CDS NP_416683.1 16130116 946679 2274179..2275273 1 NC_000913.3 putative transport system permease protein; membrane component of ABC superfamily; microcin C transporter YejABEF, permease subunit; ABC family 2275273 yejB 946679 yejB Escherichia coli str. K-12 substr. MG1655 microcin C transporter YejABEF, permease subunit; ABC family NP_416683.1 2274179 D 511145 CDS NP_416684.1 16130117 946683 2275273..2276298 1 NC_000913.3 putative transport system permease protein; membrane component of ABC superfamily; microcin C transporter YejABEF, permease subunit; ABC family 2276298 yejE 946683 yejE Escherichia coli str. K-12 substr. MG1655 microcin C transporter YejABEF, permease subunit; ABC family NP_416684.1 2275273 D 511145 CDS NP_416685.1 16130118 946689 2276300..2277889 1 NC_000913.3 putative ATP-binding component of a transport system; microcin C transporter, ATP-binding subunit; ABC family 2277889 yejF 946689 yejF Escherichia coli str. K-12 substr. MG1655 microcin C transporter, ATP-binding subunit; ABC family NP_416685.1 2276300 D 511145 CDS NP_416686.1 16130119 945319 complement(2277893..2278237) 1 NC_000913.3 uncharacterized protein 2278237 yejG 945319 yejG Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_416686.1 2277893 R 511145 CDS NP_416687.1 16130120 944808 complement(2278570..2279760) 1 NC_000913.3 bicyclomycin resistance protein; transmembrane protein; bicyclomycin/cysteine/sulfonamide efflux transporter 2279760 bcr 944808 bcr Escherichia coli str. K-12 substr. MG1655 bicyclomycin/cysteine/sulfonamide efflux transporter NP_416687.1 2278570 R 511145 CDS NP_416688.1 16130121 945378 complement(2279788..2280483) 1 NC_000913.3 16S pseudouridylate 516 synthase; 16S rRNA pseudouridine(516) synthase 2280483 rsuA 945378 rsuA Escherichia coli str. K-12 substr. MG1655 16S rRNA pseudouridine(516) synthase NP_416688.1 2279788 R 511145 CDS NP_416689.1 16130122 945529 2280632..2282392 1 NC_000913.3 putative ATP-dependent helicase; putative ATP-dependent DNA or RNA helicase 2282392 yejH 945529 yejH Escherichia coli str. K-12 substr. MG1655 putative ATP-dependent DNA or RNA helicase NP_416689.1 2280632 D 511145 CDS NP_416690.1 16130123 945618 2282517..2282801 1 NC_000913.3 50S ribosomal subunit protein L25 2282801 rplY 945618 rplY Escherichia coli str. K-12 substr. MG1655 50S ribosomal subunit protein L25 NP_416690.1 2282517 D 511145 CDS NP_416691.1 16130124 946690 complement(2282940..2283947) 1 NC_000913.3 protein present in spermidine nucleoids; spermidine nucleoid-associated protein 2283947 yejK 946690 yejK Escherichia coli str. K-12 substr. MG1655 spermidine nucleoid-associated protein NP_416691.1 2282940 R 511145 CDS NP_416692.1 16130125 946694 2284129..2284356 1 NC_000913.3 UPF0352 family protein 2284356 yejL 946694 yejL Escherichia coli str. K-12 substr. MG1655 UPF0352 family protein NP_416692.1 2284129 D 511145 CDS NP_416693.1 16130126 946685 2284376..2286136 1 NC_000913.3 putative sulfatase; essential inner membrane DUF3413 domain-containing protein; lipid A production and membrane permeability factor 2286136 yejM 946685 yejM Escherichia coli str. K-12 substr. MG1655 essential inner membrane DUF3413 domain-containing protein; lipid A production and membrane permeability factor NP_416693.1 2284376 D 511145 CDS b2190 946867 complement(join(2286390..2288914,2290114..2290180)) 1 NC_000913.3 pseudogene, autotransporter outer membrane homology;putative transport; Not classified; putative ATP-binding component of a transport system; <NULL_VALUE> 2290180 yejO 946867 yejO Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 2286390 R 511145 CDS NP_416696.1 16130129 949121 complement(2289065..2290081) 1 NC_000913.3 IS5 transposase and trans-activator 2290081 insH1 949121 insH1 Escherichia coli str. K-12 substr. MG1655 IS5 transposase and trans-activator NP_416696.1 2289065 R 511145 CDS NP_416697.1 16130130 949081 2290500..2291147 1 NC_000913.3 nitrate/nitrite response regulator (sensor NarQ); response regulator in two-component regulatory system with NarQ or NarX 2291147 narP 949081 narP Escherichia coli str. K-12 substr. MG1655 response regulator in two-component regulatory system with NarQ or NarX NP_416697.1 2290500 D 511145 CDS NP_416698.1 16130131 946623 complement(2291358..2292410) 1 NC_000913.3 possible subunit of heme lyase; heme lyase, CcmH subunit 2292410 ccmH 946623 ccmH Escherichia coli str. K-12 substr. MG1655 heme lyase, CcmH subunit NP_416698.1 2291358 R 511145 CDS NP_416699.1 16130132 949073 complement(2292407..2292964) 1 NC_000913.3 periplasmic thioredoxin of cytochrome c-type biogenesis 2292964 dsbE 949073 dsbE Escherichia coli str. K-12 substr. MG1655 periplasmic thioredoxin of cytochrome c-type biogenesis NP_416699.1 2292407 R 511145 CDS NP_416700.1 16130133 948783 complement(2292961..2294904) 1 NC_000913.3 cytochrome c-type biogenesis protein; heme lyase, CcmF subunit 2294904 ccmF 948783 ccmF Escherichia coli str. K-12 substr. MG1655 heme lyase, CcmF subunit NP_416700.1 2292961 R 511145 CDS NP_416701.1 16130134 946697 complement(2294901..2295380) 1 NC_000913.3 cytochrome c biogenesis, possible subunit of a heme lyase; periplasmic heme chaperone 2295380 ccmE 946697 ccmE Escherichia coli str. K-12 substr. MG1655 periplasmic heme chaperone NP_416701.1 2294901 R 511145 CDS NP_416702.1 16130135 946709 complement(2295377..2295586) 1 NC_000913.3 heme exporter protein C; cytochrome c biogenesis protein 2295586 ccmD 946709 ccmD Escherichia coli str. K-12 substr. MG1655 cytochrome c biogenesis protein NP_416702.1 2295377 R 511145 CDS NP_416703.1 16130136 946703 complement(2295583..2296320) 1 NC_000913.3 heme exporter protein C; membrane component of ABC superfamily; heme exporter subunit 2296320 ccmC 946703 ccmC Escherichia coli str. K-12 substr. MG1655 heme exporter subunit NP_416703.1 2295583 R 511145 CDS NP_416704.1 16130137 946692 complement(2296362..2297024) 1 NC_000913.3 heme exporter protein B, cytochrome c-type biogenesis protein; membrane component of ABC superfamily; heme exporter subunit 2297024 ccmB 946692 ccmB Escherichia coli str. K-12 substr. MG1655 heme exporter subunit NP_416704.1 2296362 R 511145 CDS NP_416705.2 90111402 946714 complement(2297021..2297644) 1 NC_000913.3 ATP binding protein of heme exporter A; ATP-binding component of ABC superfamily; heme exporter subunit 2297644 ccmA 946714 ccmA Escherichia coli str. K-12 substr. MG1655 heme exporter subunit NP_416705.2 2297021 R 511145 CDS NP_416706.1 16130139 946706 complement(2297657..2298259) 1 NC_000913.3 cytochrome c-type protein; quinol dehydrogenase, electron source for NapAB 2298259 napC 946706 napC Escherichia coli str. K-12 substr. MG1655 quinol dehydrogenase, electron source for NapAB NP_416706.1 2297657 R 511145 CDS NP_416707.4 90111403 946698 complement(2298269..2298718) 1 NC_000913.3 cytochrome c-type protein; nitrate reductase, small, cytochrome C550 subunit, periplasmic 2298718 napB 946698 napB Escherichia coli str. K-12 substr. MG1655 nitrate reductase, small, cytochrome C550 subunit, periplasmic NP_416707.4 2298269 R 511145 CDS NP_416708.1 16130141 945984 complement(2298715..2299578) 1 NC_000913.3 ferredoxin-type protein: electron transfer; ferredoxin-type protein essential for electron transfer from ubiquinol to periplasmic nitrate reductase (NapAB) 2299578 napH 945984 napH Escherichia coli str. K-12 substr. MG1655 ferredoxin-type protein essential for electron transfer from ubiquinol to periplasmic nitrate reductase (NapAB) NP_416708.1 2298715 R 511145 CDS NP_416709.1 16130142 945544 complement(2299565..2300260) 1 NC_000913.3 ferredoxin-type protein: electron transfer; ferredoxin-type protein essential for electron transfer from ubiquinol to periplasmic nitrate reductase (NapAB) 2300260 napG 945544 napG Escherichia coli str. K-12 substr. MG1655 ferredoxin-type protein essential for electron transfer from ubiquinol to periplasmic nitrate reductase (NapAB) NP_416709.1 2299565 R 511145 CDS NP_416710.1 16130143 947093 complement(2300267..2302753) 1 NC_000913.3 probable nitrate reductase 3; nitrate reductase, periplasmic, large subunit 2302753 napA 947093 napA Escherichia coli str. K-12 substr. MG1655 nitrate reductase, periplasmic, large subunit NP_416710.1 2300267 R 511145 CDS NP_416711.1 16130144 945187 complement(2302750..2303013) 1 NC_000913.3 assembly protein for periplasmic nitrate reductase 2303013 napD 945187 napD Escherichia coli str. K-12 substr. MG1655 assembly protein for periplasmic nitrate reductase NP_416711.1 2302750 R 511145 CDS NP_416712.1 16130145 946813 complement(2303003..2303497) 1 NC_000913.3 ferredoxin-type protein: electron transfer; ferredoxin-type protein, role in electron transfer to periplasmic nitrate reductase NapA 2303497 napF 946813 napF Escherichia coli str. K-12 substr. MG1655 ferredoxin-type protein, role in electron transfer to periplasmic nitrate reductase NapA NP_416712.1 2303003 R 511145 CDS NP_416713.1 16130146 946700 2303905..2304393 1 NC_000913.3 ecotin, a serine protease inhibitor 2304393 eco 946700 eco Escherichia coli str. K-12 substr. MG1655 ecotin, a serine protease inhibitor NP_416713.1 2303905 D 511145 CDS NP_416714.1 16130147 946702 complement(2305108..2306754) 1 NC_000913.3 malate dehydrogenase, FAD/NAD(P)-binding domain 2306754 mqo 946702 mqo Escherichia coli str. K-12 substr. MG1655 malate dehydrogenase, FAD/NAD(P)-binding domain NP_416714.1 2305108 R 511145 CDS NP_416715.1 16130148 946705 complement(2306972..2308615) 1 NC_000913.3 putative ATP-binding component of a transport system; microcin J25 efflux pump, TolC-dependent; fused ABC transporter permease and ATP-binding components 2308615 yojI 946705 yojI Escherichia coli str. K-12 substr. MG1655 microcin J25 efflux pump, TolC-dependent; fused ABC transporter permease and ATP-binding components NP_416715.1 2306972 R 511145 CDS NP_416716.1 16130149 946708 complement(2308691..2309341) 1 NC_000913.3 DNA repair system specific for alkylated DNA; oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions 2309341 alkB 946708 alkB Escherichia coli str. K-12 substr. MG1655 oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions NP_416716.1 2308691 R 511145 CDS NP_416717.1 16130150 946710 complement(2309341..2310405) 1 NC_000913.3 O6-methylguanine-DNA methyltransferase; transcription activator/repressor; fused DNA-binding transcriptional dual regulator/O6-methylguanine-DNA methyltransferase 2310405 ada 946710 ada Escherichia coli str. K-12 substr. MG1655 fused DNA-binding transcriptional dual regulator/O6-methylguanine-DNA methyltransferase NP_416717.1 2309341 R 511145 CDS NP_416718.1 16130151 946711 complement(2310479..2311534) 1 NC_000913.3 putative thiamine-synthetic flavin transferase lipoprotein 2311534 apbE 946711 apbE Escherichia coli str. K-12 substr. MG1655 putative thiamine-synthetic flavin transferase lipoprotein NP_416718.1 2310479 R 511145 CDS NP_416719.1 16130152 946716 complement(2311646..2312749) 1 NC_000913.3 outer membrane protein 1b (Ib;c); outer membrane porin protein C 2312749 ompC 946716 ompC Escherichia coli str. K-12 substr. MG1655 outer membrane porin protein C NP_416719.1 2311646 R 511145 CDS NP_416720.1 16130153 946717 2313488..2316160 1 NC_000913.3 putative 2-component sensor protein; phosphotransfer intermediate protein in two-component regulatory system with RcsBC 2316160 rcsD 946717 rcsD Escherichia coli str. K-12 substr. MG1655 phosphotransfer intermediate protein in two-component regulatory system with RcsBC NP_416720.1 2313488 D 511145 CDS NP_416721.1 16130154 947441 2316177..2316827 1 NC_000913.3 positive response regulator for colanic capsule biosynthesis, (sensor, RcsC); response regulator in two-component regulatory system with RcsC and YojN 2316827 rcsB 947441 rcsB Escherichia coli str. K-12 substr. MG1655 response regulator in two-component regulatory system with RcsC and YojN NP_416721.1 2316177 D 511145 CDS NP_416722.2 145698285 948993 complement(2317027..2319876) 1 NC_000913.3 sensor for ctr capsule biosynthesis, probable histidine kinase acting on RcsB; hybrid sensory kinase in two-component regulatory system with RcsB and YojN 2319876 rcsC 948993 rcsC Escherichia coli str. K-12 substr. MG1655 hybrid sensory kinase in two-component regulatory system with RcsB and YojN NP_416722.2 2317027 R 511145 CDS NP_416723.1 16130156 949011 2320043..2321869 1 NC_000913.3 sensor protein AtoS for response regulator AtoC; sensory histidine kinase in two-component regulatory system with AtoC 2321869 atoS 949011 atoS Escherichia coli str. K-12 substr. MG1655 sensory histidine kinase in two-component regulatory system with AtoC NP_416723.1 2320043 D 511145 CDS NP_416724.1 16130157 947444 2321866..2323251 1 NC_000913.3 response regulator of ato, ornithine decarboxylase antizyme (sensor ATOS); fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein 2323251 atoC 947444 atoC Escherichia coli str. K-12 substr. MG1655 fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein NP_416724.1 2321866 D 511145 CDS NP_416725.1 16130158 947525 2323447..2324109 1 NC_000913.3 acetyl-CoA:acetoacetyl-CoA transferase alpha subunit; acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit 2324109 atoD 947525 atoD Escherichia coli str. K-12 substr. MG1655 acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit NP_416725.1 2323447 D 511145 CDS NP_416726.1 16130159 946719 2324109..2324759 1 NC_000913.3 acetyl-CoA:acetoacetyl-CoA transferase beta subunit; acetyl-CoA:acetoacetyl-CoA transferase, beta subunit 2324759 atoA 946719 atoA Escherichia coli str. K-12 substr. MG1655 acetyl-CoA:acetoacetyl-CoA transferase, beta subunit NP_416726.1 2324109 D 511145 CDS NP_416727.1 16130160 946721 2324756..2326078 1 NC_000913.3 short chain fatty acid transporter 2326078 atoE 946721 atoE Escherichia coli str. K-12 substr. MG1655 short chain fatty acid transporter NP_416727.1 2324756 D 511145 CDS NP_416728.1 16130161 946727 2326109..2327293 1 NC_000913.3 acetyl-CoA acetyltransferase 2327293 atoB 946727 atoB Escherichia coli str. K-12 substr. MG1655 acetyl-CoA acetyltransferase NP_416728.1 2326109 D 511145 CDS NP_416729.1 16130162 946728 complement(2327367..2328143) 1 NC_000913.3 DUF2135 family protein, putative host defense protein 2328143 yfaP 946728 yfaP Escherichia coli str. K-12 substr. MG1655 DUF2135 family protein, putative host defense protein NP_416729.1 2327367 R 511145 CDS NP_416730.1 16130163 946730 complement(2328148..2329797) 1 NC_000913.3 tandem DUF2300 domain protein, putative host defense protein 2329797 yfaQ 946730 yfaQ Escherichia coli str. K-12 substr. MG1655 tandem DUF2300 domain protein, putative host defense protein NP_416730.1 2328148 R 511145 CDS b4500 1450231 complement(2329798..2334402) 1 NC_000913.3 pseudogene, bacterial alpha2-macroglobulin YfaS variant family; putative membrane protein; <NULL_VALUE> 2334402 yfaS 1450231 yfaS Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 2329798 R 511145 CDS NP_416732.4 90111404 946622 complement(2334336..2334959) 1 NC_000913.3 DUF1175 family protein, putative host defense protein 2334959 yfaT 946622 yfaT Escherichia coli str. K-12 substr. MG1655 DUF1175 family protein, putative host defense protein NP_416732.4 2334336 R 511145 CDS NP_416733.4 90111405 946618 complement(2334956..2336644) 1 NC_000913.3 DUF2138 family protein, putative host defense protein 2336644 yfaA 946618 yfaA Escherichia coli str. K-12 substr. MG1655 DUF2138 family protein, putative host defense protein NP_416733.4 2334956 R 511145 CDS NP_416734.1 16130166 946614 complement(2336793..2339420) 1 NC_000913.3 DNA gyrase, subunit A, type II topoisomerase; DNA gyrase (type II topoisomerase), subunit A 2339420 gyrA 946614 gyrA Escherichia coli str. K-12 substr. MG1655 DNA gyrase (type II topoisomerase), subunit A NP_416734.1 2336793 R 511145 CDS NP_416735.1 16130167 946607 2339567..2340289 1 NC_000913.3 3-demethylubiquinone-9 3-methyltransferase and 2-octaprenyl-6-hydroxy phenol methylase; bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase 2340289 ubiG 946607 ubiG Escherichia coli str. K-12 substr. MG1655 bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase NP_416735.1 2339567 D 511145 CDS NP_416736.1 16130168 946595 complement(2340417..2344169) 1 NC_000913.3 putative ATP-binding component of a transport system; adhesin 2344169 yfaL 946595 yfaL Escherichia coli str. K-12 substr. MG1655 adhesin NP_416736.1 2340417 R 511145 CDS NP_416737.1 16130169 946612 2344865..2347150 1 NC_000913.3 ribonucleoside diphosphate reductase 1, alpha subunit, B1; ribonucleoside-diphosphate reductase 1, alpha subunit 2347150 nrdA 946612 nrdA Escherichia coli str. K-12 substr. MG1655 ribonucleoside-diphosphate reductase 1, alpha subunit NP_416737.1 2344865 D 511145 CDS NP_416738.1 16130170 946732 2347384..2348514 1 NC_000913.3 ribonucleoside-diphosphate reductase 1, beta subunit, B2; ribonucleoside-diphosphate reductase 1, beta subunit, ferritin-like protein 2348514 nrdB 946732 nrdB Escherichia coli str. K-12 substr. MG1655 ribonucleoside-diphosphate reductase 1, beta subunit, ferritin-like protein NP_416738.1 2347384 D 511145 CDS NP_416739.1 16130171 946729 2348514..2348768 1 NC_000913.3 ferredoxin involved with ribonucleotide reductase diferric-tyrosyl radical (Y*) cofactor maintenance 2348768 yfaE 946729 yfaE Escherichia coli str. K-12 substr. MG1655 ferredoxin involved with ribonucleotide reductase diferric-tyrosyl radical (Y*) cofactor maintenance NP_416739.1 2348514 D 511145 CDS NP_416740.1 16130172 946731 complement(2348822..2349472) 1 NC_000913.3 pH-inducible protein involved in stress response; acid-inducible Kdo/WaaP family putative kinase 2349472 inaA 946731 inaA Escherichia coli str. K-12 substr. MG1655 acid-inducible Kdo/WaaP family putative kinase NP_416740.1 2348822 R 511145 CDS b2238 946718 2349651..2349893 1 NC_000913.3 pseudogene; <NULL_VALUE> 2349893 yfaH 946718 yfaH Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 2349651 D 511145 CDS NP_416742.1 16130174 946725 complement(2349935..2351011) 1 NC_000913.3 glycerophosphodiester phosphodiesterase, periplasmic; periplasmic glycerophosphodiester phosphodiesterase 2351011 glpQ 946725 glpQ Escherichia coli str. K-12 substr. MG1655 periplasmic glycerophosphodiester phosphodiesterase NP_416742.1 2349935 R 511145 CDS NP_416743.1 16130175 946704 complement(2351016..2352374) 1 NC_000913.3 sn-glycerol-3-phosphate permease; sn-glycerol-3-phosphate transporter 2352374 glpT 946704 glpT Escherichia coli str. K-12 substr. MG1655 sn-glycerol-3-phosphate transporter NP_416743.1 2351016 R 511145 CDS NP_416744.1 16130176 946713 2352647..2354275 1 NC_000913.3 sn-glycerol-3-phosphate dehydrogenase (anaerobic), large subunit; sn-glycerol-3-phosphate dehydrogenase (anaerobic), large subunit, FAD/NAD(P)-binding 2354275 glpA 946713 glpA Escherichia coli str. K-12 substr. MG1655 sn-glycerol-3-phosphate dehydrogenase (anaerobic), large subunit, FAD/NAD(P)-binding NP_416744.1 2352647 D 511145 CDS NP_416745.1 16130177 946733 2354265..2355524 1 NC_000913.3 sn-glycerol-3-phosphate dehydrogenase (anaerobic), membrane anchor subunit 2355524 glpB 946733 glpB Escherichia coli str. K-12 substr. MG1655 sn-glycerol-3-phosphate dehydrogenase (anaerobic), membrane anchor subunit NP_416745.1 2354265 D 511145 CDS NP_416746.1 16130178 946735 2355521..2356711 1 NC_000913.3 sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit; anaerobic sn-glycerol-3-phosphate dehydrogenase, C subunit, 4Fe-4S iron-sulfur cluster 2356711 glpC 946735 glpC Escherichia coli str. K-12 substr. MG1655 anaerobic sn-glycerol-3-phosphate dehydrogenase, C subunit, 4Fe-4S iron-sulfur cluster NP_416746.1 2355521 D 511145 CDS NP_416747.1 16130179 946737 2356904..2357803 1 NC_000913.3 transposase_31 family protein 2357803 yfaD 946737 yfaD Escherichia coli str. K-12 substr. MG1655 transposase_31 family protein NP_416747.1 2356904 D 511145 CDS YP_001165324.1 145698287 1450280 2357816..2358001 1 NC_000913.3 uncharacterized protein 2358001 ypaA 1450280 ypaA Escherichia coli str. K-12 substr. MG1655 uncharacterized protein YP_001165324.1 2357816 D 511145 CDS NP_416748.1 16130180 948054 complement(2358042..2358845) 1 NC_000913.3 2-keto-3-deoxy-L-rhamnonate aldolase 2358845 rhmA 948054 rhmA Escherichia coli str. K-12 substr. MG1655 2-keto-3-deoxy-L-rhamnonate aldolase NP_416748.1 2358042 R 511145 CDS NP_416749.4 90111406 945796 complement(2358863..2360152) 1 NC_000913.3 putative transport protein; putative L-rhamnonate transporter 2360152 rhmT 945796 rhmT Escherichia coli str. K-12 substr. MG1655 putative L-rhamnonate transporter NP_416749.4 2358863 R 511145 CDS NP_416750.2 226524733 945881 complement(2360209..2361414) 1 NC_000913.3 putative racemase; L-rhamnonate dehydratase 2361414 rhmD 945881 rhmD Escherichia coli str. K-12 substr. MG1655 L-rhamnonate dehydratase NP_416750.2 2360209 R 511145 CDS NP_416751.1 16130183 944752 complement(2361429..2362211) 1 NC_000913.3 putative regulator; putative DNA-binding transcriptional regulator for the rhm operon 2362211 rhmR 944752 rhmR Escherichia coli str. K-12 substr. MG1655 putative DNA-binding transcriptional regulator for the rhm operon NP_416751.1 2361429 R 511145 CDS NP_416752.1 16130184 945478 complement(2362431..2363633) 1 NC_000913.3 inactive PncC family protein 2363633 yfaY 945478 yfaY Escherichia coli str. K-12 substr. MG1655 inactive PncC family protein NP_416752.1 2362431 R 511145 CDS NP_416753.4 90111407 946739 complement(2363733..2364275) 1 NC_000913.3 outer membrane protein, putative porin 2364275 yfaZ 946739 yfaZ Escherichia coli str. K-12 substr. MG1655 outer membrane protein, putative porin NP_416753.4 2363733 R 511145 CDS NP_416754.1 16130186 946740 2364554..2364979 1 NC_000913.3 nucleoside triphosphatase 2364979 nudI 946740 nudI Escherichia coli str. K-12 substr. MG1655 nucleoside triphosphatase NP_416754.1 2364554 D 511145 CDS NP_416755.1 16130187 944945 complement(2365018..2365620) 1 NC_000913.3 protein induced by aluminum; putative LPS core heptose(II)-phosphate phosphatase 2365620 ais 944945 ais Escherichia coli str. K-12 substr. MG1655 putative LPS core heptose(II)-phosphate phosphatase NP_416755.1 2365018 R 511145 CDS NP_416756.5 145698288 947375 2365928..2367067 1 NC_000913.3 putative enzyme; uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase, PLP-dependent 2367067 arnB 947375 arnB Escherichia coli str. K-12 substr. MG1655 uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase, PLP-dependent NP_416756.5 2365928 D 511145 CDS NP_416757.1 16130189 945275 2367071..2368039 1 NC_000913.3 putative sugar transferase; undecaprenyl phosphate-L-Ara4FN transferase 2368039 arnC 945275 arnC Escherichia coli str. K-12 substr. MG1655 undecaprenyl phosphate-L-Ara4FN transferase NP_416757.1 2367071 D 511145 CDS NP_416758.1 16130190 947683 2368039..2370021 1 NC_000913.3 putative transformylase; fused UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase 2370021 arnA 947683 arnA Escherichia coli str. K-12 substr. MG1655 fused UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase NP_416758.1 2368039 D 511145 CDS NP_416759.1 16130191 945334 2370018..2370908 1 NC_000913.3 undecaprenyl phosphate-alpha-L-ara4FN deformylase 2370908 arnD 945334 arnD Escherichia coli str. K-12 substr. MG1655 undecaprenyl phosphate-alpha-L-ara4FN deformylase NP_416759.1 2370018 D 511145 CDS NP_416760.1 16130192 947297 2370908..2372560 1 NC_000913.3 4-amino-4-deoxy-L-arabinose transferase (lipid A modification); 4-amino-4-deoxy-L-arabinose transferase 2372560 arnT 947297 arnT Escherichia coli str. K-12 substr. MG1655 4-amino-4-deoxy-L-arabinose transferase NP_416760.1 2370908 D 511145 CDS YP_588462.1 94541119 1450282 2372557..2372892 1 NC_000913.3 undecaprenyl phosphate-alpha-L-ara4N exporter; flippase ArnEF subunit 2372892 arnE 1450282 arnE Escherichia coli str. K-12 substr. MG1655 undecaprenyl phosphate-alpha-L-ara4N exporter; flippase ArnEF subunit YP_588462.1 2372557 D 511145 CDS NP_416761.4 90111409 945344 2372892..2373278 1 NC_000913.3 putative transport/receptor protein; undecaprenyl phosphate-alpha-L-ara4N exporter; flippase ArnEF subunit 2373278 arnF 945344 arnF Escherichia coli str. K-12 substr. MG1655 undecaprenyl phosphate-alpha-L-ara4N exporter; flippase ArnEF subunit NP_416761.4 2372892 D 511145 CDS NP_416762.2 90111410 945130 complement(2373272..2373538) 1 NC_000913.3 an active Salmonella PmrD ortholog blocks dephosphorylation of PmrA(BasR) by PmrB(BasS); inactive two-component system connector protein 2373538 pmrD 945130 pmrD Escherichia coli str. K-12 substr. MG1655 inactive two-component system connector protein NP_416762.2 2373272 R 511145 CDS NP_416763.1 16130195 946741 complement(2373648..2375003) 1 NC_000913.3 O-succinylbenzoate-CoA ligase 2375003 menE 946741 menE Escherichia coli str. K-12 substr. MG1655 O-succinylbenzoate-CoA ligase NP_416763.1 2373648 R 511145 CDS NP_416764.1 16130196 946734 complement(2375000..2375962) 1 NC_000913.3 o-succinylbenzoyl-CoA synthase; conversion of chorismate to 2-o-succinylbenzoyl-CoA; O-succinylbenzoyl-CoA synthase 2375962 menC 946734 menC Escherichia coli str. K-12 substr. MG1655 O-succinylbenzoyl-CoA synthase NP_416764.1 2375000 R 511145 CDS NP_416765.1 16130197 946747 complement(2375962..2376819) 1 NC_000913.3 dihydroxynaphtoic acid synthetase; dihydroxynaphthoic acid synthetase 2376819 menB 946747 menB Escherichia coli str. K-12 substr. MG1655 dihydroxynaphthoic acid synthetase NP_416765.1 2375962 R 511145 CDS NP_416766.1 16130198 946736 complement(2376834..2377592) 1 NC_000913.3 putative enzyme; 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 2377592 menH 946736 menH Escherichia coli str. K-12 substr. MG1655 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase NP_416766.1 2376834 R 511145 CDS NP_416767.1 16130199 946720 complement(2377589..2379259) 1 NC_000913.3 2-oxoglutarate decarboxylase; SHCHC synthase; 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; SEPHCHC synthase 2379259 menD 946720 menD Escherichia coli str. K-12 substr. MG1655 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; SEPHCHC synthase NP_416767.1 2377589 R 511145 CDS NP_416768.4 90111411 946712 complement(2379348..2380643) 1 NC_000913.3 isochorismate hydroxymutase 2, menaquinone biosynthesis; isochorismate synthase 2 2380643 menF 946712 menF Escherichia coli str. K-12 substr. MG1655 isochorismate synthase 2 NP_416768.4 2379348 R 511145 CDS NP_416769.1 16130201 946751 complement(2380722..2381027) 1 NC_000913.3 DUF883 family protein, putative membrane-anchored ribosome-binding protein 2381027 elaB 946751 elaB Escherichia coli str. K-12 substr. MG1655 DUF883 family protein, putative membrane-anchored ribosome-binding protein NP_416769.1 2380722 R 511145 CDS NP_416770.1 16130202 946750 complement(2381082..2381543) 1 NC_000913.3 putative acyl-CoA transferase 2381543 elaA 946750 elaA Escherichia coli str. K-12 substr. MG1655 putative acyl-CoA transferase NP_416770.1 2381082 R 511145 CDS NP_416771.4 90111412 946760 2381608..2382525 1 NC_000913.3 RNase BN, tRNA processing enzyme 2382525 rbn 946760 rbn Escherichia coli str. K-12 substr. MG1655 RNase BN, tRNA processing enzyme NP_416771.4 2381608 D 511145 CDS NP_416772.1 16130204 946742 2382713..2383924 1 NC_000913.3 putative sulfatase / phosphatase; protease, capable of cleaving an AMC-ubiquitin model substrate 2383924 elaD 946742 elaD Escherichia coli str. K-12 substr. MG1655 protease, capable of cleaving an AMC-ubiquitin model substrate NP_416772.1 2382713 D 511145 CDS NP_416773.1 16130205 946743 complement(2383995..2385722) 1 NC_000913.3 Von Willebrand factor domain putative lipoprotein 2385722 yfbK 946743 yfbK Escherichia coli str. K-12 substr. MG1655 Von Willebrand factor domain putative lipoprotein NP_416773.1 2383995 R 511145 CDS NP_416774.2 90111413 945832 2385860..2386831 1 NC_000913.3 putative aminopeptidase; putative peptidase 2386831 yfbL 945832 yfbL Escherichia coli str. K-12 substr. MG1655 putative peptidase NP_416774.2 2385860 D 511145 CDS NP_416775.1 16130207 946745 2386934..2387437 1 NC_000913.3 DUF1877 family protein 2387437 yfbM 946745 yfbM Escherichia coli str. K-12 substr. MG1655 DUF1877 family protein NP_416775.1 2386934 D 511145 CDS NP_416776.1 16130208 946748 complement(2387710..2388426) 1 NC_000913.3 uncharacterized protein 2388426 yfbN 946748 yfbN Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_416776.1 2387710 R 511145 CDS NP_416777.2 226524734 946752 2388635..2389057 1 NC_000913.3 uncharacterized protein 2389057 yfbO 946752 yfbO Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_416777.2 2388635 D 511145 CDS NP_416778.2 345452721 946754 2389116..2389964 1 NC_000913.3 TPR-like repeats-containing protein 2389964 yfbP 946754 yfbP Escherichia coli str. K-12 substr. MG1655 TPR-like repeats-containing protein NP_416778.2 2389116 D 511145 CDS NP_416779.2 145698289 945136 complement(2390048..2391505) 1 NC_000913.3 NADH dehydrogenase I chain N; NADH:ubiquinone oxidoreductase, membrane subunit N 2391505 nuoN 945136 nuoN Escherichia coli str. K-12 substr. MG1655 NADH:ubiquinone oxidoreductase, membrane subunit N NP_416779.2 2390048 R 511145 CDS NP_416780.1 16130212 947731 complement(2391512..2393041) 1 NC_000913.3 NADH dehydrogenase I chain M; NADH:ubiquinone oxidoreductase, membrane subunit M 2393041 nuoM 947731 nuoM Escherichia coli str. K-12 substr. MG1655 NADH:ubiquinone oxidoreductase, membrane subunit M NP_416780.1 2391512 R 511145 CDS NP_416781.1 16130213 945540 complement(2393205..2395046) 1 NC_000913.3 NADH dehydrogenase I chain L; NADH:ubiquinone oxidoreductase, membrane subunit L 2395046 nuoL 945540 nuoL Escherichia coli str. K-12 substr. MG1655 NADH:ubiquinone oxidoreductase, membrane subunit L NP_416781.1 2393205 R 511145 CDS NP_416782.1 16130214 947580 complement(2395043..2395345) 1 NC_000913.3 NADH dehydrogenase I chain K; NADH:ubiquinone oxidoreductase, membrane subunit K 2395345 nuoK 947580 nuoK Escherichia coli str. K-12 substr. MG1655 NADH:ubiquinone oxidoreductase, membrane subunit K NP_416782.1 2395043 R 511145 CDS NP_416783.1 16130215 946756 complement(2395342..2395896) 1 NC_000913.3 NADH dehydrogenase I chain J; NADH:ubiquinone oxidoreductase, membrane subunit J 2395896 nuoJ 946756 nuoJ Escherichia coli str. K-12 substr. MG1655 NADH:ubiquinone oxidoreductase, membrane subunit J NP_416783.1 2395342 R 511145 CDS NP_416784.1 16130216 946757 complement(2395908..2396450) 1 NC_000913.3 NADH dehydrogenase I chain I; NADH:ubiquinone oxidoreductase, chain I 2396450 nuoI 946757 nuoI Escherichia coli str. K-12 substr. MG1655 NADH:ubiquinone oxidoreductase, chain I NP_416784.1 2395908 R 511145 CDS NP_416785.1 16130217 946761 complement(2396465..2397442) 1 NC_000913.3 NADH dehydrogenase I chain H; NADH:ubiquinone oxidoreductase, membrane subunit H 2397442 nuoH 946761 nuoH Escherichia coli str. K-12 substr. MG1655 NADH:ubiquinone oxidoreductase, membrane subunit H NP_416785.1 2396465 R 511145 CDS NP_416786.4 145698290 946762 complement(2397439..2400165) 1 NC_000913.3 NADH dehydrogenase I chain G; NADH:ubiquinone oxidoreductase, chain G 2400165 nuoG 946762 nuoG Escherichia coli str. K-12 substr. MG1655 NADH:ubiquinone oxidoreductase, chain G NP_416786.4 2397439 R 511145 CDS NP_416787.1 16130219 946753 complement(2400218..2401555) 1 NC_000913.3 NADH dehydrogenase I chain F; NADH:ubiquinone oxidoreductase, chain F 2401555 nuoF 946753 nuoF Escherichia coli str. K-12 substr. MG1655 NADH:ubiquinone oxidoreductase, chain F NP_416787.1 2400218 R 511145 CDS NP_416788.1 16130220 946746 complement(2401552..2402052) 1 NC_000913.3 NADH dehydrogenase I chain E; NADH:ubiquinone oxidoreductase, chain E 2402052 nuoE 946746 nuoE Escherichia coli str. K-12 substr. MG1655 NADH:ubiquinone oxidoreductase, chain E NP_416788.1 2401552 R 511145 CDS NP_416789.2 145698291 946759 complement(2402055..2403845) 1 NC_000913.3 NADH dehydrogenase I chain C, D; NADH:ubiquinone oxidoreductase, fused CD subunit 2403845 nuoC 946759 nuoC Escherichia coli str. K-12 substr. MG1655 NADH:ubiquinone oxidoreductase, fused CD subunit NP_416789.2 2402055 R 511145 CDS NP_416790.1 16130222 946738 complement(2403951..2404613) 1 NC_000913.3 NADH dehydrogenase I chain B; NADH:ubiquinone oxidoreductase, chain B 2404613 nuoB 946738 nuoB Escherichia coli str. K-12 substr. MG1655 NADH:ubiquinone oxidoreductase, chain B NP_416790.1 2403951 R 511145 CDS NP_416791.3 49176207 946764 complement(2404629..2405072) 1 NC_000913.3 NADH dehydrogenase I chain A; NADH:ubiquinone oxidoreductase, membrane subunit A 2405072 nuoA 946764 nuoA Escherichia coli str. K-12 substr. MG1655 NADH:ubiquinone oxidoreductase, membrane subunit A NP_416791.3 2404629 R 511145 CDS NP_416792.1 16130224 946769 complement(2405703..2406641) 1 NC_000913.3 transcriptional repressor of flagellar, motility and chemotaxis genes 2406641 lrhA 946769 lrhA Escherichia coli str. K-12 substr. MG1655 transcriptional repressor of flagellar, motility and chemotaxis genes NP_416792.1 2405703 R 511145 CDS NP_416793.1 16130225 946772 2407561..2408778 1 NC_000913.3 putative aminotransferase; valine-pyruvate aminotransferase 2 2408778 alaA 946772 alaA Escherichia coli str. K-12 substr. MG1655 valine-pyruvate aminotransferase 2 NP_416793.1 2407561 D 511145 CDS NP_416794.1 16130226 946771 2408862..2409461 1 NC_000913.3 putative alpha helix protein; 5'-nucleotidase 2409461 yfbR 946771 yfbR Escherichia coli str. K-12 substr. MG1655 5'-nucleotidase NP_416794.1 2408862 D 511145 CDS NP_416795.1 16130227 946766 complement(2409520..2411352) 1 NC_000913.3 putative transport protein; putative transporter 2411352 yfbS 946766 yfbS Escherichia coli str. K-12 substr. MG1655 putative transporter NP_416795.1 2409520 R 511145 CDS NP_416796.2 90111414 946777 complement(2411439..2412089) 1 NC_000913.3 putative phosphatase; sugar phosphatas 2412089 yfbT 946777 yfbT Escherichia coli str. K-12 substr. MG1655 sugar phosphatas NP_416796.2 2411439 R 511145 CDS NP_416797.2 90111415 946767 complement(2412100..2412594) 1 NC_000913.3 UPF0304 family protein 2412594 yfbU 946767 yfbU Escherichia coli str. K-12 substr. MG1655 UPF0304 family protein NP_416797.2 2412100 R 511145 CDS NP_416798.1 16130230 946774 complement(2412677..2413132) 1 NC_000913.3 UPF0208 family inner membrane protein 2413132 yfbV 946774 yfbV Escherichia coli str. K-12 substr. MG1655 UPF0208 family inner membrane protein NP_416798.1 2412677 R 511145 CDS NP_416799.1 16130231 946775 2413470..2414672 1 NC_000913.3 acetate kinase; acetate kinase A and propionate kinase 2 2414672 ackA 946775 ackA Escherichia coli str. K-12 substr. MG1655 acetate kinase A and propionate kinase 2 NP_416799.1 2413470 D 511145 CDS NP_416800.1 16130232 946778 2414747..2416891 1 NC_000913.3 phosphotransacetylase; phosphate acetyltransferase 2416891 pta 946778 pta Escherichia coli str. K-12 substr. MG1655 phosphate acetyltransferase NP_416800.1 2414747 D 511145 CDS NP_416801.2 90111416 946780 2417081..2418601 1 NC_000913.3 putative S-transferase; putative inner membrane transporter, C4-dicarboxylate anaerobic carrier family 2418601 yfcC 946780 yfcC Escherichia coli str. K-12 substr. MG1655 putative inner membrane transporter, C4-dicarboxylate anaerobic carrier family NP_416801.2 2417081 D 511145 CDS NP_416802.1 16130234 946783 complement(2418634..2419176) 1 NC_000913.3 putative regulator; putative NUDIX hydrolase 2419176 yfcD 946783 yfcD Escherichia coli str. K-12 substr. MG1655 putative NUDIX hydrolase NP_416802.1 2418634 R 511145 CDS NP_416803.3 49176208 946755 complement(2419234..2419788) 1 NC_000913.3 phosphodiesterase activity on bis-pNPP 2419788 yfcE 946755 yfcE Escherichia coli str. K-12 substr. MG1655 phosphodiesterase activity on bis-pNPP NP_416803.3 2419234 R 511145 CDS NP_416804.1 16130236 946749 complement(2419841..2420485) 1 NC_000913.3 glutathione S-transferase 2420485 yfcF 946749 yfcF Escherichia coli str. K-12 substr. MG1655 glutathione S-transferase NP_416804.1 2419841 R 511145 CDS NP_416805.1 16130237 946763 2420621..2421268 1 NC_000913.3 putative S-transferase; GSH-dependent disulfide bond oxidoreductase 2421268 yfcG 946763 yfcG Escherichia coli str. K-12 substr. MG1655 GSH-dependent disulfide bond oxidoreductase NP_416805.1 2420621 D 511145 CDS NP_416806.1 16130238 946781 2421325..2421687 1 NC_000913.3 D-erythro-7,8-dihydroneopterin tri P epimerase; D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase and dihydroneopterin aldolase 2421687 folX 946781 folX Escherichia coli str. K-12 substr. MG1655 D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase and dihydroneopterin aldolase NP_416806.1 2421325 D 511145 CDS NP_416807.1 16130239 946784 2421708..2422601 1 NC_000913.3 putative sugar nucleotide epimerase; putative NAD-dependent nucleotide-sugar epimerase 2422601 yfcH 946784 yfcH Escherichia coli str. K-12 substr. MG1655 putative NAD-dependent nucleotide-sugar epimerase NP_416807.1 2421708 D 511145 CDS NP_416808.1 16130240 946787 complement(2422649..2423539) 1 NC_000913.3 transposase_31 family protein 2423539 yfcI 946787 yfcI Escherichia coli str. K-12 substr. MG1655 transposase_31 family protein NP_416808.1 2422649 R 511145 CDS NP_416809.1 16130241 946789 complement(2423736..2424509) 1 NC_000913.3 ATP-binding component of histidine transport; histidine/lysine/arginine/ornithine transporter subunit 2424509 hisP 946789 hisP Escherichia coli str. K-12 substr. MG1655 histidine/lysine/arginine/ornithine transporter subunit NP_416809.1 2423736 R 511145 CDS NP_416810.1 16130242 946790 complement(2424517..2425233) 1 NC_000913.3 histidine transport, membrane protein M; membrane component of ABC superfamily; histidine/lysine/arginine/ornithine transporter subunit 2425233 hisM 946790 hisM Escherichia coli str. K-12 substr. MG1655 histidine/lysine/arginine/ornithine transporter subunit NP_416810.1 2424517 R 511145 CDS NP_416811.1 16130243 947235 complement(2425230..2425916) 1 NC_000913.3 histidine transport system permease protein; membrane component of ABC superfamily; histidine/lysine/arginine/ornithine transporter permease subunit 2425916 hisQ 947235 hisQ Escherichia coli str. K-12 substr. MG1655 histidine/lysine/arginine/ornithine transporter permease subunit NP_416811.1 2425230 R 511145 CDS NP_416812.1 16130244 945309 complement(2426006..2426788) 1 NC_000913.3 histidine-binding periplasmic protein of high-affinity histidine transport system; periplasmic-binding component of ABC superfamily; histidine/lysine/arginine/ornithine transporter subunit 2426788 hisJ 945309 hisJ Escherichia coli str. K-12 substr. MG1655 histidine/lysine/arginine/ornithine transporter subunit NP_416812.1 2426006 R 511145 CDS NP_416813.1 16130245 949030 complement(2427009..2427791) 1 NC_000913.3 lysine-, arginine-, ornithine-binding periplasmic protein; periplasmic-binding component of ABC superfamily; lysine/arginine/ornithine transporter subunit 2427791 argT 949030 argT Escherichia coli str. K-12 substr. MG1655 lysine/arginine/ornithine transporter subunit NP_416813.1 2427009 R 511145 CDS NP_416814.1 16130246 949033 complement(2428057..2428626) 1 NC_000913.3 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 2428626 ubiX 949033 ubiX Escherichia coli str. K-12 substr. MG1655 3-octaprenyl-4-hydroxybenzoate carboxy-lyase NP_416814.1 2428057 R 511145 CDS NP_416815.1 16130247 946794 complement(2428721..2430238) 1 NC_000913.3 amidophosphoribosyltransferase = PRPP amidotransferase; amidophosphoribosyltransferase 2430238 purF 946794 purF Escherichia coli str. K-12 substr. MG1655 amidophosphoribosyltransferase NP_416815.1 2428721 R 511145 CDS NP_416816.1 16130248 945055 complement(2430275..2430763) 1 NC_000913.3 colicin V production membrane protein 2430763 cvpA 945055 cvpA Escherichia coli str. K-12 substr. MG1655 colicin V production membrane protein NP_416816.1 2430275 R 511145 CDS NP_416817.2 90111417 944971 complement(2431022..2431684) 1 NC_000913.3 putative lipoprotein; membrane-anchored periplasmic protein involved in septation 2431684 dedD 944971 dedD Escherichia coli str. K-12 substr. MG1655 membrane-anchored periplasmic protein involved in septation NP_416817.2 2431022 R 511145 CDS NP_416818.1 16130250 945451 complement(2431674..2432942) 1 NC_000913.3 dihydrofolate:folylpolyglutamate synthetase; dihydrofolate synthetase; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase 2432942 folC 945451 folC Escherichia coli str. K-12 substr. MG1655 bifunctional folylpolyglutamate synthase/ dihydrofolate synthase NP_416818.1 2431674 R 511145 CDS NP_416819.1 16130251 946796 complement(2433012..2433926) 1 NC_000913.3 acetylCoA carboxylase, carboxytransferase component, beta subunit; acetyl-CoA carboxylase, beta (carboxyltransferase) subunit 2433926 accD 946796 accD Escherichia coli str. K-12 substr. MG1655 acetyl-CoA carboxylase, beta (carboxyltransferase) subunit NP_416819.1 2433012 R 511145 CDS NP_416820.1 16130252 946798 complement(2434082..2434741) 1 NC_000913.3 DedA family inner membrane protein 2434741 dedA 946798 dedA Escherichia coli str. K-12 substr. MG1655 DedA family inner membrane protein NP_416820.1 2434082 R 511145 CDS NP_416821.1 16130253 946793 complement(2434824..2435636) 1 NC_000913.3 tRNA pseudouridine(38-40) synthase 2435636 truA 946793 truA Escherichia coli str. K-12 substr. MG1655 tRNA pseudouridine(38-40) synthase NP_416821.1 2434824 R 511145 CDS NP_416822.1 16130254 946797 complement(2435636..2436649) 1 NC_000913.3 putative PTS system enzyme II A component; putative semialdehyde dehydrogenase 2436649 usg 946797 usg Escherichia coli str. K-12 substr. MG1655 putative semialdehyde dehydrogenase NP_416822.1 2435636 R 511145 CDS NP_416823.1 16130255 946785 complement(2436715..2437851) 1 NC_000913.3 erythronate-4-phosphate dehyrogenase; erythronate-4-phosphate dehydrogenase 2437851 pdxB 946785 pdxB Escherichia coli str. K-12 substr. MG1655 erythronate-4-phosphate dehydrogenase NP_416823.1 2436715 R 511145 CDS NP_416824.1 16130256 946776 2437950..2438945 1 NC_000913.3 flagellar assembly protein; putative flagella assembly protein 2438945 flk 946776 flk Escherichia coli str. K-12 substr. MG1655 putative flagella assembly protein NP_416824.1 2437950 D 511145 CDS NP_416825.1 16130257 946791 complement(2438942..2440120) 1 NC_000913.3 putative transport protein; putative arabinose efflux transporter 2440120 yfcJ 946791 yfcJ Escherichia coli str. K-12 substr. MG1655 putative arabinose efflux transporter NP_416825.1 2438942 R 511145 CDS NP_416826.1 16130258 946799 complement(2440385..2441605) 1 NC_000913.3 3-oxoacyl-[acyl-carrier-protein] synthase I 2441605 fabB 946799 fabB Escherichia coli str. K-12 substr. MG1655 3-oxoacyl-[acyl-carrier-protein] synthase I NP_416826.1 2440385 R 511145 CDS NP_416827.4 90111418 946800 2441764..2443770 1 NC_000913.3 putative peptidase; fused 5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase and FAD-dependent demodification enzyme 2443770 mnmC 946800 mnmC Escherichia coli str. K-12 substr. MG1655 fused 5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase and FAD-dependent demodification enzyme NP_416827.4 2441764 D 511145 CDS NP_416828.1 16130260 946804 complement(2443891..2444169) 1 NC_000913.3 uncharacterized protein 2444169 yfcL 946804 yfcL Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_416828.1 2443891 R 511145 CDS NP_416829.1 16130261 946807 complement(2444203..2444751) 1 NC_000913.3 putative transporting ATPase; Elongation Factor P Lys34 hydroxylase 2444751 epmC 946807 epmC Escherichia coli str. K-12 substr. MG1655 Elongation Factor P Lys34 hydroxylase NP_416829.1 2444203 R 511145 CDS NP_416830.1 16130262 946808 complement(2444751..2445560) 1 NC_000913.3 putative structural protein; UPF0721 family inner membrane protein 2445560 yfcA 946808 yfcA Escherichia coli str. K-12 substr. MG1655 UPF0721 family inner membrane protein NP_416830.1 2444751 R 511145 CDS NP_416831.1 16130263 946812 complement(2445560..2446384) 1 NC_000913.3 murein DD-endopeptidase, penicillin-insensitive; murein DD-endopeptidase 2446384 mepA 946812 mepA Escherichia coli str. K-12 substr. MG1655 murein DD-endopeptidase NP_416831.1 2445560 R 511145 CDS NP_416832.1 16130264 946814 complement(2446388..2447473) 1 NC_000913.3 chorismate synthase 2447473 aroC 946814 aroC Escherichia coli str. K-12 substr. MG1655 chorismate synthase NP_416832.1 2446388 R 511145 CDS NP_416833.4 90111419 946805 complement(2447508..2448440) 1 NC_000913.3 putative adenine-specific methylase; N5-glutamine methyltransferase 2448440 prmB 946805 prmB Escherichia coli str. K-12 substr. MG1655 N5-glutamine methyltransferase NP_416833.4 2447508 R 511145 CDS NP_416834.1 16130266 944847 2448606..2449157 1 NC_000913.3 putative DNA endonuclease 2449157 smrB 944847 smrB Escherichia coli str. K-12 substr. MG1655 putative DNA endonuclease NP_416834.1 2448606 D 511145 CDS NP_416835.2 90111420 946620 complement(2449228..2450049) 1 NC_000913.3 DUF2544 family putative outer membrane protein 2450049 yfcO 946620 yfcO Escherichia coli str. K-12 substr. MG1655 DUF2544 family putative outer membrane protein NP_416835.2 2449228 R 511145 CDS NP_416836.1 16130268 946788 complement(2450051..2450590) 1 NC_000913.3 putative fimbrial-like protein; putative fimbrial-like adhesin protein 2450590 yfcP 946788 yfcP Escherichia coli str. K-12 substr. MG1655 putative fimbrial-like adhesin protein NP_416836.1 2450051 R 511145 CDS NP_416837.1 16130269 946779 complement(2450587..2451075) 1 NC_000913.3 putative fimbrial-like adhesin protein 2451075 yfcQ 946779 yfcQ Escherichia coli str. K-12 substr. MG1655 putative fimbrial-like adhesin protein NP_416837.1 2450587 R 511145 CDS NP_416838.1 16130270 946818 complement(2451072..2451584) 1 NC_000913.3 putative fimbrial protein; putative fimbrial-like adhesin protein 2451584 yfcR 946818 yfcR Escherichia coli str. K-12 substr. MG1655 putative fimbrial-like adhesin protein NP_416838.1 2451072 R 511145 CDS NP_416839.1 16130271 946418 complement(2451584..2452336) 1 NC_000913.3 putative chaperone; putative periplasmic pilin chaperone 2452336 yfcS 946418 yfcS Escherichia coli str. K-12 substr. MG1655 putative periplasmic pilin chaperone NP_416839.1 2451584 R 511145 CDS b4661 1450268 complement(2452356..2455001) 1 NC_000913.3 pseudogene, FimD fimbrial export usher family;putative membrane; Not classified; putative outer membrane protein; <NULL_VALUE> 2455001 yfcU 1450268 yfcU Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 2452356 R 511145 CDS NP_416841.1 16130272 949109 complement(2455083..2455646) 1 NC_000913.3 putative fimbrial-like protein; putative fimbrial-like adhesin protein 2455646 yfcV 949109 yfcV Escherichia coli str. K-12 substr. MG1655 putative fimbrial-like adhesin protein NP_416841.1 2455083 R 511145 CDS NP_416842.1 16130273 946815 complement(2456327..2456812) 1 NC_000913.3 phosphohistidine phosphatase 2456812 sixA 946815 sixA Escherichia coli str. K-12 substr. MG1655 phosphohistidine phosphatase NP_416842.1 2456327 R 511145 CDS NP_416843.1 16130274 949097 complement(2457015..2459159) 1 NC_000913.3 putative enzyme; fused enoyl-CoA hydratase and epimerase and isomerase/3-hydroxyacyl-CoA dehydrogenase 2459159 fadJ 949097 fadJ Escherichia coli str. K-12 substr. MG1655 fused enoyl-CoA hydratase and epimerase and isomerase/3-hydroxyacyl-CoA dehydrogenase NP_416843.1 2457015 R 511145 CDS NP_416844.1 16130275 948823 complement(2459159..2460469) 1 NC_000913.3 putative acyltransferase; beta-ketoacyl-CoA thiolase, anaerobic, subunit 2460469 fadI 948823 fadI Escherichia coli str. K-12 substr. MG1655 beta-ketoacyl-CoA thiolase, anaerobic, subunit NP_416844.1 2459159 R 511145 CDS NP_416845.2 90111421 948817 complement(2460650..2460934) 1 NC_000913.3 UPF0381 family protein 2460934 yfcZ 948817 yfcZ Escherichia coli str. K-12 substr. MG1655 UPF0381 family protein NP_416845.2 2460650 R 511145 CDS NP_416846.2 145698292 946820 2461306..2462646 1 NC_000913.3 long-chain fatty acid transport protein (outer membrane flp protein); long-chain fatty acid outer membrane transporter 2462646 fadL 946820 fadL Escherichia coli str. K-12 substr. MG1655 long-chain fatty acid outer membrane transporter NP_416846.2 2461306 D 511145 CDS NP_416847.1 16130278 946819 2463012..2464070 1 NC_000913.3 uncharacterized protein 2464070 yfdF 946819 yfdF Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_416847.1 2463012 D 511145 CDS NP_416848.1 16130279 945582 complement(2464252..2465007) 1 NC_000913.3 lipoprotein precursor; ABC transporter maintaining OM lipid asymmetry, OM lipoprotein component 2465007 mlaA 945582 mlaA Escherichia coli str. K-12 substr. MG1655 ABC transporter maintaining OM lipid asymmetry, OM lipoprotein component NP_416848.1 2464252 R 511145 CDS NP_416849.1 16130280 944801 2465301..2466233 1 NC_000913.3 putative transport protein; putative inner membrane protein 2466233 yfdC 944801 yfdC Escherichia coli str. K-12 substr. MG1655 putative inner membrane protein NP_416849.1 2465301 D 511145 CDS NP_416850.1 16130281 946821 2466545..2467702 1 NC_000913.3 CPS-53 (KpLE1) prophage; putative prophage CPS-53 integrase 2467702 intS 946821 intS Escherichia coli str. K-12 substr. MG1655 CPS-53 (KpLE1) prophage; putative prophage CPS-53 integrase NP_416850.1 2466545 D 511145 CDS NP_416851.1 16130282 948821 2467855..2468217 1 NC_000913.3 CPS-53 (KpLE1) prophage; bactoprenol-linked glucose translocase (flippase) 2468217 gtrA 948821 gtrA Escherichia coli str. K-12 substr. MG1655 CPS-53 (KpLE1) prophage; bactoprenol-linked glucose translocase (flippase) NP_416851.1 2467855 D 511145 CDS NP_416852.1 16130283 949098 2468214..2469134 1 NC_000913.3 CPS-53 (KpLE1) prophage; bactoprenol glucosyl transferase 2469134 gtrB 949098 gtrB Escherichia coli str. K-12 substr. MG1655 CPS-53 (KpLE1) prophage; bactoprenol glucosyl transferase NP_416852.1 2468214 D 511145 CDS NP_416853.1 16130284 946822 2469131..2470462 1 NC_000913.3 putative ligase; serotype-specific glucosyl transferase, CPS-53 (KpLE1) prophage 2470462 gtrS 946822 gtrS Escherichia coli str. K-12 substr. MG1655 serotype-specific glucosyl transferase, CPS-53 (KpLE1) prophage NP_416853.1 2469131 D 511145 CDS b2353 946825 2470815..2471105 1 NC_000913.3 pseudogene, CPS-53 (KpLE1) prophage; tail fiber assembly protein fragment;Phage or Prophage Related; <NULL_VALUE> 2471105 tfaS 946825 tfaS Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 2470815 D 511145 CDS NP_416855.1 16130286 948822 complement(2471077..2471517) 1 NC_000913.3 CPS-53 (KpLE1) prophage; conserved protein 2471517 yfdK 948822 yfdK Escherichia coli str. K-12 substr. MG1655 CPS-53 (KpLE1) prophage; conserved protein NP_416855.1 2471077 R 511145 CDS b2355 949099 complement(2471544..2472122) 1 NC_000913.3 pseudogene, CPS-53 (KpLE1) prophage;Phage or Prophage Related; <NULL_VALUE> 2472122 yfdL 949099 yfdL Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 2471544 R 511145 CDS b2356 945416 complement(2472118..2472387) 1 NC_000913.3 CPS-53 (KpLE1) prophage; putative methyltransferase;Phage or Prophage Related; <NULL_VALUE> 2472387 yfdM 945416 yfdM Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 2472118 R 511145 CDS NP_416858.1 16130289 946419 complement(2472387..2472881) 1 NC_000913.3 CPS-53 (KpLE1) prophage; uncharacterized protein 2472881 yfdN 946419 yfdN Escherichia coli str. K-12 substr. MG1655 CPS-53 (KpLE1) prophage; uncharacterized protein NP_416858.1 2472387 R 511145 CDS b2358 947403 complement(2472878..2473585) 1 NC_000913.3 pseudogene, CPS-53 (KpLE1) prophage; bacteriophage replication protein O family;Phage or Prophage Related; <NULL_VALUE> 2473585 oweS 947403 oweS Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 2472878 R 511145 CDS NP_416860.4 145698293 945565 2473604..2473966 1 NC_000913.3 CPS-53 (KpLE1) prophage; uncharacterized protein 2473966 yfdP 945565 yfdP Escherichia coli str. K-12 substr. MG1655 CPS-53 (KpLE1) prophage; uncharacterized protein NP_416860.4 2473604 D 511145 CDS NP_416861.1 16130292 946827 2474032..2474856 1 NC_000913.3 CPS-53 (KpLE1) prophage; uncharacterized protein 2474856 yfdQ 946827 yfdQ Escherichia coli str. K-12 substr. MG1655 CPS-53 (KpLE1) prophage; uncharacterized protein NP_416861.1 2474032 D 511145 CDS NP_416862.2 90111424 946834 2474984..2475520 1 NC_000913.3 CPS-53 (KpLE1) prophage; conserved protein 2475520 yfdR 946834 yfdR Escherichia coli str. K-12 substr. MG1655 CPS-53 (KpLE1) prophage; conserved protein NP_416862.2 2474984 D 511145 CDS NP_416863.1 16130294 946426 2475511..2475873 1 NC_000913.3 CPS-53 (KpLE1) prophage; uncharacterized protein 2475873 yfdS 946426 yfdS Escherichia coli str. K-12 substr. MG1655 CPS-53 (KpLE1) prophage; uncharacterized protein NP_416863.1 2475511 D 511145 CDS NP_416864.1 16130295 946836 2475873..2476178 1 NC_000913.3 CPS-53 (KpLE1) prophage; uncharacterized protein 2476178 yfdT 946836 yfdT Escherichia coli str. K-12 substr. MG1655 CPS-53 (KpLE1) prophage; uncharacterized protein NP_416864.1 2475873 D 511145 CDS b4545 1450283 2476181..2476231 1 NC_000913.3 exisonase remnant; <NULL_VALUE> 2476231 ypdJ 1450283 ypdJ Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 2476181 D 511145 CDS YP_588463.1 94541120 1450232 2476310..2476510 1 NC_000913.3 response regulator inhibitor for tor operon 2476510 torI 1450232 torI Escherichia coli str. K-12 substr. MG1655 response regulator inhibitor for tor operon YP_588463.1 2476310 D 511145 CDS NP_416865.1 16130296 948828 complement(2476694..2477629) 1 NC_000913.3 D-serine dehydratase (deaminase) transcriptional activator; dsd operon activator; autorepressor 2477629 dsdC 948828 dsdC Escherichia coli str. K-12 substr. MG1655 dsd operon activator; autorepressor NP_416865.1 2476694 R 511145 CDS NP_416866.1 16130297 949103 2477847..2479184 1 NC_000913.3 D-serine transporter 2479184 dsdX 949103 dsdX Escherichia coli str. K-12 substr. MG1655 D-serine transporter NP_416866.1 2477847 D 511145 CDS NP_416867.1 16130298 946837 2479202..2480530 1 NC_000913.3 D-serine dehydratase (deaminase); D-serine dehydratase 2480530 dsdA 946837 dsdA Escherichia coli str. K-12 substr. MG1655 D-serine dehydratase NP_416867.1 2479202 D 511145 CDS NP_416868.1 16130299 946835 complement(2480638..2482176) 1 NC_000913.3 multidrug resistance protein Y; putative multidrug efflux system 2482176 emrY 946835 emrY Escherichia coli str. K-12 substr. MG1655 putative multidrug efflux system NP_416868.1 2480638 R 511145 CDS NP_416869.1 16130300 946840 complement(2482176..2483339) 1 NC_000913.3 multidrug resistance protein K; EmrKY-TolC multidrug resistance efflux pump, membrane fusion protein component 2483339 emrK 946840 emrK Escherichia coli str. K-12 substr. MG1655 EmrKY-TolC multidrug resistance efflux pump, membrane fusion protein component NP_416869.1 2482176 R 511145 CDS NP_416870.1 16130301 946841 2483755..2484369 1 NC_000913.3 putative positive transcription regulator (sensor EvgS); response regulator in two-component regulatory system with EvgS 2484369 evgA 946841 evgA Escherichia coli str. K-12 substr. MG1655 response regulator in two-component regulatory system with EvgS NP_416870.1 2483755 D 511145 CDS NP_416871.1 16130302 946844 2484374..2487967 1 NC_000913.3 putative sensor for regulator EvgA; hybrid sensory histidine kinase in two-component regulatory system with EvgA 2487967 evgS 946844 evgS Escherichia coli str. K-12 substr. MG1655 hybrid sensory histidine kinase in two-component regulatory system with EvgA NP_416871.1 2484374 D 511145 CDS NP_416872.4 162135906 946432 complement(2488023..2489168) 1 NC_000913.3 putative enzyme; acetyl-CoA:oxalate CoA-transferase 2489168 yfdE 946432 yfdE Escherichia coli str. K-12 substr. MG1655 acetyl-CoA:oxalate CoA-transferase NP_416872.4 2488023 R 511145 CDS NP_416873.1 16130304 949110 complement(2489242..2490186) 1 NC_000913.3 putative receptor protein; putative transporter 2490186 yfdV 949110 yfdV Escherichia coli str. K-12 substr. MG1655 putative transporter NP_416873.1 2489242 R 511145 CDS NP_416874.1 16130305 946845 complement(2490256..2491950) 1 NC_000913.3 oxalyl CoA decarboxylase, ThDP-dependent 2491950 oxc 946845 oxc Escherichia coli str. K-12 substr. MG1655 oxalyl CoA decarboxylase, ThDP-dependent NP_416874.1 2490256 R 511145 CDS NP_416875.1 16130306 946842 complement(2492004..2493254) 1 NC_000913.3 putative enzyme; formyl-CoA transferase, NAD(P)-binding 2493254 frc 946842 frc Escherichia coli str. K-12 substr. MG1655 formyl-CoA transferase, NAD(P)-binding NP_416875.1 2492004 R 511145 CDS NP_416876.1 16130307 949108 complement(2493767..2494402) 1 NC_000913.3 uncharacterized protein 2494402 yfdX 949108 yfdX Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_416876.1 2493767 R 511145 CDS NP_416877.1 16130308 949107 2494698..2494973 1 NC_000913.3 putative lipoprotein involved in colanic acid biosynthesis 2494973 ypdI 949107 ypdI Escherichia coli str. K-12 substr. MG1655 putative lipoprotein involved in colanic acid biosynthesis NP_416877.1 2494698 D 511145 CDS NP_416878.1 16130309 948842 complement(2495050..2495292) 1 NC_000913.3 DUF2545 family putative inner membrane protein 2495292 yfdY 948842 yfdY Escherichia coli str. K-12 substr. MG1655 DUF2545 family putative inner membrane protein NP_416878.1 2495050 R 511145 CDS NP_416879.4 90111426 946847 2495645..2496565 1 NC_000913.3 putative heat shock protein; palmitoleoyl-acyl carrier protein (ACP)-dependent acyltransferase 2496565 lpxP 946847 lpxP Escherichia coli str. K-12 substr. MG1655 palmitoleoyl-acyl carrier protein (ACP)-dependent acyltransferase NP_416879.4 2495645 D 511145 CDS YP_002791250.1 226524735 7751622 2496921..2496992 1 NC_000913.3 inner membrane protein 2496992 ypdK 7751622 ypdK Escherichia coli str. K-12 substr. MG1655 inner membrane protein YP_002791250.1 2496921 D 511145 CDS NP_416880.1 16130311 946850 complement(2497057..2498295) 1 NC_000913.3 putative aminotransferase; valine-pyruvate aminotransferase 3 2498295 alaC 946850 alaC Escherichia coli str. K-12 substr. MG1655 valine-pyruvate aminotransferase 3 NP_416880.1 2497057 R 511145 CDS NP_416881.1 16130312 946723 2498671..2500368 1 NC_000913.3 putative sensor protein; sensor kinase regulating yhjX; pyruvate-responsive YpdAB two-component system 2500368 ypdA 946723 ypdA Escherichia coli str. K-12 substr. MG1655 sensor kinase regulating yhjX; pyruvate-responsive YpdAB two-component system NP_416881.1 2498671 D 511145 CDS NP_416882.1 16130313 947395 2500383..2501117 1 NC_000913.3 putative 2-component transcriptional regulator; response regulator activating yhjX; pyruvate-responsive YpdAB two-component system 2501117 ypdB 947395 ypdB Escherichia coli str. K-12 substr. MG1655 response regulator activating yhjX; pyruvate-responsive YpdAB two-component system NP_416882.1 2500383 D 511145 CDS NP_416883.1 16130314 946856 2501130..2501987 1 NC_000913.3 putative ARAC-type regulatory protein; putative DNA-binding protein 2501987 ypdC 946856 ypdC Escherichia coli str. K-12 substr. MG1655 putative DNA-binding protein NP_416883.1 2501130 D 511145 CDS NP_416884.1 16130315 946852 complement(2501990..2504485) 1 NC_000913.3 putative PTS system enzyme IIA component, enzyme I; putative PTS enzyme, Hpr component/enzyme I component/enzyme IIA component 2504485 fryA 946852 fryA Escherichia coli str. K-12 substr. MG1655 putative PTS enzyme, Hpr component/enzyme I component/enzyme IIA component NP_416884.1 2501990 R 511145 CDS NP_416885.1 16130316 946848 complement(2504510..2505547) 1 NC_000913.3 aminopeptidase 2505547 ypdE 946848 ypdE Escherichia coli str. K-12 substr. MG1655 aminopeptidase NP_416885.1 2504510 R 511145 CDS NP_416886.1 16130317 946853 complement(2505547..2506632) 1 NC_000913.3 putative peptidase; Xaa-Pro aminopeptidase 2506632 ypdF 946853 ypdF Escherichia coli str. K-12 substr. MG1655 Xaa-Pro aminopeptidase NP_416886.1 2505547 R 511145 CDS NP_416887.1 16130318 949111 complement(2506647..2507894) 1 NC_000913.3 putative enzyme IIC component of PTS 2507894 fryC 949111 fryC Escherichia coli str. K-12 substr. MG1655 putative enzyme IIC component of PTS NP_416887.1 2506647 R 511145 CDS NP_416888.1 16130319 949087 complement(2507916..2508242) 1 NC_000913.3 putative PTS system enzyme IIB component; putative enzyme IIB component of PTS 2508242 fryB 949087 fryB Escherichia coli str. K-12 substr. MG1655 putative enzyme IIB component of PTS NP_416888.1 2507916 R 511145 CDS NP_416889.1 16130320 946858 complement(2508461..2509426) 1 NC_000913.3 glucokinase 2509426 glk 946858 glk Escherichia coli str. K-12 substr. MG1655 glucokinase NP_416889.1 2508461 R 511145 CDS NP_416890.1 16130321 946854 2509630..2510886 1 NC_000913.3 putative ion channel protein 2510886 yfeO 946854 yfeO Escherichia coli str. K-12 substr. MG1655 putative ion channel protein NP_416890.1 2509630 D 511145 CDS NP_416891.1 16130322 946855 2511001..2511327 1 NC_000913.3 the overlapping reading frame (b2391) is no longer thought to be an actual gene, and has been deaccessioned; DUF2502 family putative periplasmic protein 2511327 ypeC 946855 ypeC Escherichia coli str. K-12 substr. MG1655 DUF2502 family putative periplasmic protein NP_416891.1 2511001 D 511145 CDS NP_416893.1 16130324 946899 complement(2511468..2512706) 1 NC_000913.3 manganese/divalent cation transporter 2512706 mntH 946899 mntH Escherichia coli str. K-12 substr. MG1655 manganese/divalent cation transporter NP_416893.1 2511468 R 511145 CDS NP_416894.1 16130325 946895 2513042..2514244 1 NC_000913.3 permease of transport system for 3 nucleosides; nucleoside (except guanosine) transporter 2514244 nupC 946895 nupC Escherichia coli str. K-12 substr. MG1655 nucleoside (except guanosine) transporter NP_416894.1 2513042 D 511145 CDS NP_416895.2 90111427 946896 2514331..2515443 1 NC_000913.3 IS186 transposase 2515443 insL1 946896 insL1 Escherichia coli str. K-12 substr. MG1655 IS186 transposase NP_416895.2 2514331 D 511145 CDS NP_416896.4 90111428 946864 complement(2515643..2517832) 1 NC_000913.3 putative diguanylate cyclase 2517832 yfeA 946864 yfeA Escherichia coli str. K-12 substr. MG1655 putative diguanylate cyclase NP_416896.4 2515643 R 511145 CDS NP_416897.2 90111429 946857 2518467..2518811 1 NC_000913.3 DUF1323 family putative DNA-binding protein 2518811 yfeC 946857 yfeC Escherichia coli str. K-12 substr. MG1655 DUF1323 family putative DNA-binding protein NP_416897.2 2518467 D 511145 CDS NP_416898.3 226524736 946865 2518813..2519205 1 NC_000913.3 DUF1323 family putative DNA-binding protein 2519205 yfeD 946865 yfeD Escherichia coli str. K-12 substr. MG1655 DUF1323 family putative DNA-binding protein NP_416898.3 2518813 D 511145 CDS NP_416899.1 16130330 946906 complement(2519257..2520672) 1 NC_000913.3 glutamate tRNA synthetase, catalytic subunit; glutamyl-tRNA synthetase 2520672 gltX 946906 gltX Escherichia coli str. K-12 substr. MG1655 glutamyl-tRNA synthetase NP_416899.1 2519257 R 511145 CDS NP_416900.1 16130331 946862 complement(2521593..2522477) 1 NC_000913.3 regulator for xapA; transcriptional activator of xapAB 2522477 xapR 946862 xapR Escherichia coli str. K-12 substr. MG1655 transcriptional activator of xapAB NP_416900.1 2521593 R 511145 CDS NP_416901.1 16130332 946868 complement(2522729..2523985) 1 NC_000913.3 xanthosine permease; xanthosine transporter 2523985 xapB 946868 xapB Escherichia coli str. K-12 substr. MG1655 xanthosine transporter NP_416901.1 2522729 R 511145 CDS NP_416902.1 16130333 946878 complement(2524045..2524878) 1 NC_000913.3 xanthosine phosphorylase; purine nucleoside phosphorylase II 2524878 xapA 946878 xapA Escherichia coli str. K-12 substr. MG1655 purine nucleoside phosphorylase II NP_416902.1 2524045 R 511145 CDS NP_416903.1 16130334 946872 2525127..2525891 1 NC_000913.3 putative sugar hydrolase; putative outer membrane protein 2525891 yfeN 946872 yfeN Escherichia coli str. K-12 substr. MG1655 putative outer membrane protein NP_416903.1 2525127 D 511145 CDS NP_416904.1 16130335 946873 complement(2525930..2526856) 1 NC_000913.3 putative transcriptional regulator LYSR-type; transcriptional regulator of yefH 2526856 yfeR 946873 yfeR Escherichia coli str. K-12 substr. MG1655 transcriptional regulator of yefH NP_416904.1 2525930 R 511145 CDS NP_416905.1 16130336 946874 2526946..2527944 1 NC_000913.3 putative cytochrome oxidase; putative inorganic ion transporter 2527944 yfeH 946874 yfeH Escherichia coli str. K-12 substr. MG1655 putative inorganic ion transporter NP_416905.1 2526946 D 511145 CDS YP_588464.1 94541121 1450285 complement(2527941..2528159) 1 NC_000913.3 DUF3820 family protein 2528159 ypeB 1450285 ypeB Escherichia coli str. K-12 substr. MG1655 DUF3820 family protein YP_588464.1 2527941 R 511145 CDS NP_416906.1 16130337 946885 complement(2528161..2530176) 1 NC_000913.3 DNA ligase; DNA ligase, NAD(+)-dependent 2530176 ligA 946885 ligA Escherichia coli str. K-12 substr. MG1655 DNA ligase, NAD(+)-dependent NP_416906.1 2528161 R 511145 CDS NP_416907.1 16130338 946869 complement(2530247..2531233) 1 NC_000913.3 cell division protein involved in FtsZ ring; FtsZ stabilizer 2531233 zipA 946869 zipA Escherichia coli str. K-12 substr. MG1655 FtsZ stabilizer NP_416907.1 2530247 R 511145 CDS NP_416908.1 16130339 946875 2531463..2532224 1 NC_000913.3 required for sulfate transport; EI24 family inner membrane protein; putative sulfate transporter 2532224 cysZ 946875 cysZ Escherichia coli str. K-12 substr. MG1655 EI24 family inner membrane protein; putative sulfate transporter NP_416908.1 2531463 D 511145 CDS NP_416909.1 16130340 946877 2532409..2533380 1 NC_000913.3 cysteine synthase A, O-acetylserine sulfhydrolase A; cysteine synthase A, O-acetylserine sulfhydrolase A subunit 2533380 cysK 946877 cysK Escherichia coli str. K-12 substr. MG1655 cysteine synthase A, O-acetylserine sulfhydrolase A subunit NP_416909.1 2532409 D 511145 CDS NP_416910.1 16130341 946886 2533764..2534021 1 NC_000913.3 PTS system protein HPr; phosphohistidinoprotein-hexose phosphotransferase component of PTS system (Hpr) 2534021 ptsH 946886 ptsH Escherichia coli str. K-12 substr. MG1655 phosphohistidinoprotein-hexose phosphotransferase component of PTS system (Hpr) NP_416910.1 2533764 D 511145 CDS NP_416911.1 16130342 946879 2534066..2535793 1 NC_000913.3 PEP-protein phosphotransferase system enzyme I; PEP-protein phosphotransferase of PTS system (enzyme I) 2535793 ptsI 946879 ptsI Escherichia coli str. K-12 substr. MG1655 PEP-protein phosphotransferase of PTS system (enzyme I) NP_416911.1 2534066 D 511145 CDS NP_416912.1 16130343 946880 2535834..2536343 1 NC_000913.3 PTS system, glucose-specific IIA component; glucose-specific enzyme IIA component of PTS 2536343 crr 946880 crr Escherichia coli str. K-12 substr. MG1655 glucose-specific enzyme IIA component of PTS NP_416912.1 2535834 D 511145 CDS NP_416913.1 16130344 946881 complement(2536386..2537237) 1 NC_000913.3 pyridoxal/pyridoxine/pyridoxamine kinase; pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase 2537237 pdxK 946881 pdxK Escherichia coli str. K-12 substr. MG1655 pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase NP_416913.1 2536386 R 511145 CDS NP_416914.1 16130345 946876 2537342..2537716 1 NC_000913.3 uncharacterized protein 2537716 yfeK 946876 yfeK Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_416914.1 2537342 D 511145 CDS NP_416915.1 16130346 946887 2537749..2538483 1 NC_000913.3 WGR domain protein 2538483 yfeS 946887 yfeS Escherichia coli str. K-12 substr. MG1655 WGR domain protein NP_416915.1 2537749 D 511145 CDS NP_416916.1 16130347 946888 complement(2538672..2539583) 1 NC_000913.3 cysteine synthase B, O-acetylserine sulfhydrolase B; cysteine synthase B (O-acetylserine sulfhydrolase B) 2539583 cysM 946888 cysM Escherichia coli str. K-12 substr. MG1655 cysteine synthase B (O-acetylserine sulfhydrolase B) NP_416916.1 2538672 R 511145 CDS NP_416917.1 16130348 946889 complement(2539717..2540814) 1 NC_000913.3 ATP-binding component of sulfate permease A protein; chromate resistance; ATP-binding component of ABC superfamily; sulfate/thiosulfate transporter subunit 2540814 cysA 946889 cysA Escherichia coli str. K-12 substr. MG1655 sulfate/thiosulfate transporter subunit NP_416917.1 2539717 R 511145 CDS YP_026168.2 90111430 2847743 complement(2540804..2541679) 1 NC_000913.3 sulfate transport system permease W protein; membrane component of ABC superfamily; sulfate/thiosulfate ABC transporter subunit 2541679 cysW 2847743 cysW Escherichia coli str. K-12 substr. MG1655 sulfate/thiosulfate ABC transporter subunit YP_026168.2 2540804 R 511145 CDS NP_416919.1 16130349 946882 complement(2541679..2542512) 1 NC_000913.3 sulfate, thiosulfate transport system permease T protein; membrane component of ABC superfamily; sulfate/thiosulfate ABC transporter permease 2542512 cysU 946882 cysU Escherichia coli str. K-12 substr. MG1655 sulfate/thiosulfate ABC transporter permease NP_416919.1 2541679 R 511145 CDS NP_416920.1 16130350 946883 complement(2542512..2543528) 1 NC_000913.3 thiosulfate binding protein; periplasmic-binding component of ABC superfamily; thiosulfate-binding protein 2543528 cysP 946883 cysP Escherichia coli str. K-12 substr. MG1655 thiosulfate-binding protein NP_416920.1 2542512 R 511145 CDS NP_416921.4 90111431 946898 complement(2543832..2544623) 1 NC_000913.3 putative oxidoreductase; furfural resistance protein, putative short-chain oxidoreductase 2544623 ucpA 946898 ucpA Escherichia coli str. K-12 substr. MG1655 furfural resistance protein, putative short-chain oxidoreductase NP_416921.4 2543832 R 511145 CDS NP_416922.1 16130352 946568 complement(2544752..2545609) 1 NC_000913.3 repressor for murPQ, MurNAc 6-P inducible 2545609 murR 946568 murR Escherichia coli str. K-12 substr. MG1655 repressor for murPQ, MurNAc 6-P inducible NP_416922.1 2544752 R 511145 CDS NP_416923.1 16130353 946893 2545773..2546669 1 NC_000913.3 putative regulator; N-acetylmuramic acid 6-phosphate (MurNAc-6-P) etherase 2546669 murQ 946893 murQ Escherichia coli str. K-12 substr. MG1655 N-acetylmuramic acid 6-phosphate (MurNAc-6-P) etherase NP_416923.1 2545773 D 511145 CDS NP_416924.1 16130354 946894 2546673..2548097 1 NC_000913.3 N-acetylmuramic acid permease, EIIBC component, PTS system 2548097 murP 946894 murP Escherichia coli str. K-12 substr. MG1655 N-acetylmuramic acid permease, EIIBC component, PTS system NP_416924.1 2546673 D 511145 CDS NP_416925.2 90111432 946907 2548102..2549406 1 NC_000913.3 putative beta-lactamase; penicillin binding protein PBP4B; weak DD-carboxypeptidase activity 2549406 yfeW 946907 yfeW Escherichia coli str. K-12 substr. MG1655 penicillin binding protein PBP4B; weak DD-carboxypeptidase activity NP_416925.2 2548102 D 511145 CDS NP_416926.4 90111433 946913 complement(2549646..2550545) 1 NC_000913.3 porphyrinogen oxidase, cytoplasmic 2550545 yfeX 946913 yfeX Escherichia coli str. K-12 substr. MG1655 porphyrinogen oxidase, cytoplasmic NP_416926.4 2549646 R 511145 CDS NP_416927.1 16130357 946919 complement(2550641..2551216) 1 NC_000913.3 RpoE-regulated lipoprotein 2551216 yfeY 946919 yfeY Escherichia coli str. K-12 substr. MG1655 RpoE-regulated lipoprotein NP_416927.1 2550641 R 511145 CDS NP_416928.4 90111434 946918 complement(2551277..2551726) 1 NC_000913.3 inner membrane protein 2551726 yfeZ 946918 yfeZ Escherichia coli str. K-12 substr. MG1655 inner membrane protein NP_416928.4 2551277 R 511145 CDS NP_416929.4 90111435 946917 complement(2551713..2552138) 1 NC_000913.3 putative acyl-CoA transferase 2552138 ypeA 946917 ypeA Escherichia coli str. K-12 substr. MG1655 putative acyl-CoA transferase NP_416929.4 2551713 R 511145 CDS NP_416930.1 16130360 946916 2552352..2553221 1 NC_000913.3 N-acetylmuramoyl-l-alanine amidase I 2553221 amiA 946916 amiA Escherichia coli str. K-12 substr. MG1655 N-acetylmuramoyl-l-alanine amidase I NP_416930.1 2552352 D 511145 CDS NP_416931.1 16130361 946908 2553225..2554124 1 NC_000913.3 coproporphyrinogen III oxidase 2554124 hemF 946908 hemF Escherichia coli str. K-12 substr. MG1655 coproporphyrinogen III oxidase NP_416931.1 2553225 D 511145 CDS NP_416932.1 16130362 946911 complement(2554130..2555182) 1 NC_000913.3 putative ARAC-type regulatory protein; eut operon transcriptional activator, AraC family 2555182 eutR 946911 eutR Escherichia coli str. K-12 substr. MG1655 eut operon transcriptional activator, AraC family NP_416932.1 2554130 R 511145 CDS NP_416933.4 90111436 946912 complement(2555228..2555728) 1 NC_000913.3 putative ethanol utilization carboxysome structural protein 2555728 eutK 946912 eutK Escherichia coli str. K-12 substr. MG1655 putative ethanol utilization carboxysome structural protein NP_416933.4 2555228 R 511145 CDS NP_416934.1 16130364 946914 complement(2555741..2556400) 1 NC_000913.3 putative ethanol utilization carboxysome structural protein 2556400 eutL 946914 eutL Escherichia coli str. K-12 substr. MG1655 putative ethanol utilization carboxysome structural protein NP_416934.1 2555741 R 511145 CDS NP_416935.1 16130365 946925 complement(2556410..2557297) 1 NC_000913.3 ethanolamine ammonia-lyase, light chain; ethanolamine ammonia-lyase, small subunit (light chain) 2557297 eutC 946925 eutC Escherichia coli str. K-12 substr. MG1655 ethanolamine ammonia-lyase, small subunit (light chain) NP_416935.1 2556410 R 511145 CDS NP_416936.4 90111437 946924 complement(2557318..2558679) 1 NC_000913.3 ethanolamine ammonia-lyase, heavy chain; ethanolamine ammonia-lyase, large subunit, heavy chain 2558679 eutB 946924 eutB Escherichia coli str. K-12 substr. MG1655 ethanolamine ammonia-lyase, large subunit, heavy chain NP_416936.4 2557318 R 511145 CDS NP_416937.2 145698295 946923 2558858..2560066 1 NC_000913.3 putative prophage integrase; CPZ-55 prophage; putative phage integrase 2560066 intZ 946923 intZ Escherichia coli str. K-12 substr. MG1655 CPZ-55 prophage; putative phage integrase NP_416937.2 2558858 D 511145 CDS NP_416938.1 16130368 946922 2560257..2560898 1 NC_000913.3 CPZ-55 prophage; uncharacterized protein 2560898 yffL 946922 yffL Escherichia coli str. K-12 substr. MG1655 CPZ-55 prophage; uncharacterized protein NP_416938.1 2560257 D 511145 CDS NP_416939.1 16130369 946921 2561368..2561613 1 NC_000913.3 CPZ-55 prophage; uncharacterized protein 2561613 yffM 946921 yffM Escherichia coli str. K-12 substr. MG1655 CPZ-55 prophage; uncharacterized protein NP_416939.1 2561368 D 511145 CDS NP_416940.2 145698296 946930 2561625..2561993 1 NC_000913.3 CPZ-55 prophage; uncharacterized protein 2561993 yffN 946930 yffN Escherichia coli str. K-12 substr. MG1655 CPZ-55 prophage; uncharacterized protein NP_416940.2 2561625 D 511145 CDS NP_416941.1 16130371 946929 2562111..2562527 1 NC_000913.3 CPZ-55 prophage; uncharacterized protein 2562527 yffO 946929 yffO Escherichia coli str. K-12 substr. MG1655 CPZ-55 prophage; uncharacterized protein NP_416941.1 2562111 D 511145 CDS NP_416942.1 16130372 946928 2562524..2563117 1 NC_000913.3 CPZ-55 prophage; uncharacterized protein 2563117 yffP 946928 yffP Escherichia coli str. K-12 substr. MG1655 CPZ-55 prophage; uncharacterized protein NP_416942.1 2562524 D 511145 CDS NP_416943.2 145698297 946927 2563592..2563969 1 NC_000913.3 CPZ-55 prophage; uncharacterized protein 2563969 yffQ 946927 yffQ Escherichia coli str. K-12 substr. MG1655 CPZ-55 prophage; uncharacterized protein NP_416943.2 2563592 D 511145 CDS NP_416944.1 16130374 946931 2563980..2564372 1 NC_000913.3 CPZ-55 prophage; uncharacterized protein 2564372 yffR 946931 yffR Escherichia coli str. K-12 substr. MG1655 CPZ-55 prophage; uncharacterized protein NP_416944.1 2563980 D 511145 CDS NP_416945.2 145698298 946932 2564523..2565332 1 NC_000913.3 CPZ-55 prophage; uncharacterized protein 2565332 yffS 946932 yffS Escherichia coli str. K-12 substr. MG1655 CPZ-55 prophage; uncharacterized protein NP_416945.2 2564523 D 511145 CDS NP_416946.1 16130376 946937 complement(2565481..2566884) 1 NC_000913.3 reactivating factor for ethanolamine ammonia lyase 2566884 eutA 946937 eutA Escherichia coli str. K-12 substr. MG1655 reactivating factor for ethanolamine ammonia lyase NP_416946.1 2565481 R 511145 CDS NP_416947.1 16130377 944979 complement(2566881..2568107) 1 NC_000913.3 ethanolamine utilization; homolog of Salmonella putative transport protein; ethanolamine transporter 2568107 eutH 944979 eutH Escherichia coli str. K-12 substr. MG1655 ethanolamine transporter NP_416947.1 2566881 R 511145 CDS NP_416948.4 90111438 946233 complement(2568324..2569511) 1 NC_000913.3 ethanolamine utilization; homolog of Salmonella enzyme, similar to iron-containing alcohol dehydrogenase; ethanol dehydrogenase involved in ethanolamine utilization; aldehyde reductase, converts acetaldehyde to ethanol 2569511 eutG 946233 eutG Escherichia coli str. K-12 substr. MG1655 ethanol dehydrogenase involved in ethanolamine utilization; aldehyde reductase, converts acetaldehyde to ethanol NP_416948.4 2568324 R 511145 CDS NP_416949.1 16130379 947588 complement(2569501..2570337) 1 NC_000913.3 ethanolamine utilization; homolog of Salmonella gene; ethanolamine utilization protein, HSP70/actin superfamily protein 2570337 eutJ 947588 eutJ Escherichia coli str. K-12 substr. MG1655 ethanolamine utilization protein, HSP70/actin superfamily protein NP_416949.1 2569501 R 511145 CDS NP_416950.1 16130380 946943 complement(2570348..2571751) 1 NC_000913.3 ethanolamine utilization; similar to acetaldehyde dehydrogenase; aldehyde oxidoreductase, ethanolamine utilization protein 2571751 eutE 946943 eutE Escherichia coli str. K-12 substr. MG1655 aldehyde oxidoreductase, ethanolamine utilization protein NP_416950.1 2570348 R 511145 CDS NP_416951.1 16130381 946945 complement(2571763..2572050) 1 NC_000913.3 detox protein; Ethanolamine catabolic microcompartment shell protein 2572050 eutN 946945 eutN Escherichia coli str. K-12 substr. MG1655 Ethanolamine catabolic microcompartment shell protein NP_416951.1 2571763 R 511145 CDS NP_416952.2 90111439 946942 complement(2572157..2572450) 1 NC_000913.3 detox protein; ethanolamine utilization protein, putative carboxysome structural protein 2572450 eutM 946942 eutM Escherichia coli str. K-12 substr. MG1655 ethanolamine utilization protein, putative carboxysome structural protein NP_416952.2 2572157 R 511145 CDS NP_416953.1 16130383 946940 complement(2572489..2573505) 1 NC_000913.3 ethanolamine utilization; homolog of Salmonella acetyl/butyryl P transferase; phosphate acetyltransferase 2573505 eutD 946940 eutD Escherichia coli str. K-12 substr. MG1655 phosphate acetyltransferase NP_416953.1 2572489 R 511145 CDS NP_416954.1 16130384 946939 complement(2573502..2574305) 1 NC_000913.3 cobalamin adenosyltransferase involved in ethanolamine utilization 2574305 eutT 946939 eutT Escherichia coli str. K-12 substr. MG1655 cobalamin adenosyltransferase involved in ethanolamine utilization NP_416954.1 2573502 R 511145 CDS NP_416955.1 16130385 946935 complement(2574302..2575003) 1 NC_000913.3 RmlC-like cupin domain protein 2575003 eutQ 946935 eutQ Escherichia coli str. K-12 substr. MG1655 RmlC-like cupin domain protein NP_416955.1 2574302 R 511145 CDS NP_416956.1 16130386 946933 complement(2574978..2575457) 1 NC_000913.3 putative P-loop NTPase ethanolamine utilization protein 2575457 eutP 946933 eutP Escherichia coli str. K-12 substr. MG1655 putative P-loop NTPase ethanolamine utilization protein NP_416956.1 2574978 R 511145 CDS NP_416957.4 90111440 946936 complement(2575470..2575805) 1 NC_000913.3 putative ethanol utilization carboxysome structural protein 2575805 eutS 946936 eutS Escherichia coli str. K-12 substr. MG1655 putative ethanol utilization carboxysome structural protein NP_416957.4 2575470 R 511145 CDS NP_416958.1 16130388 946947 complement(2576098..2578377) 1 NC_000913.3 putative multimodular enzyme; malic enzyme: putative oxidoreductase/putative phosphotransacetylase 2578377 maeB 946947 maeB Escherichia coli str. K-12 substr. MG1655 malic enzyme: putative oxidoreductase/putative phosphotransacetylase NP_416958.1 2576098 R 511145 CDS NP_416959.1 16130389 947006 2578666..2579616 1 NC_000913.3 transaldolase A 2579616 talA 947006 talA Escherichia coli str. K-12 substr. MG1655 transaldolase A NP_416959.1 2578666 D 511145 CDS NP_416960.1 16130390 945865 2579636..2581639 1 NC_000913.3 transketolase 2 isozyme; transketolase 2, thiamine triphosphate-binding 2581639 tktB 945865 tktB Escherichia coli str. K-12 substr. MG1655 transketolase 2, thiamine triphosphate-binding NP_416960.1 2579636 D 511145 CDS NP_416961.1 16130391 946828 complement(2581734..2582777) 1 NC_000913.3 DUF1176 family protein 2582777 ypfG 946828 ypfG Escherichia coli str. K-12 substr. MG1655 DUF1176 family protein NP_416961.1 2581734 R 511145 CDS NP_416962.1 16130392 947072 complement(2582903..2583478) 1 NC_000913.3 GDP-mannose pyrophosphatase 2583478 nudK 947072 nudK Escherichia coli str. K-12 substr. MG1655 GDP-mannose pyrophosphatase NP_416962.1 2582903 R 511145 CDS NP_416963.1 16130393 947383 complement(2583546..2585525) 1 NC_000913.3 putative oxidoreductase, FeS binding subunit/NAD/FAD-binding subunit 2585525 aegA 947383 aegA Escherichia coli str. K-12 substr. MG1655 putative oxidoreductase, FeS binding subunit/NAD/FAD-binding subunit NP_416963.1 2583546 R 511145 CDS NP_416964.1 16130394 946948 2585731..2587431 1 NC_000913.3 sensor for nitrate reductase system, protein histidine kinase (acts on NarP and narL); sensory histidine kinase in two-component regulatory system with NarP (NarL) 2587431 narQ 946948 narQ Escherichia coli str. K-12 substr. MG1655 sensory histidine kinase in two-component regulatory system with NarP (NarL) NP_416964.1 2585731 D 511145 CDS NP_416965.1 16130395 945464 2587595..2590708 1 NC_000913.3 aminoglycoside/multidrug efflux system 2590708 acrD 945464 acrD Escherichia coli str. K-12 substr. MG1655 aminoglycoside/multidrug efflux system NP_416965.1 2587595 D 511145 CDS YP_001165325.1 145698299 5061513 complement(2590807..2590866) 1 NC_000913.3 stress-induced small enterobacterial protein 2590866 ypfM 5061513 ypfM Escherichia coli str. K-12 substr. MG1655 stress-induced small enterobacterial protein YP_001165325.1 2590807 R 511145 CDS NP_416966.1 16130396 946953 2591247..2591603 1 NC_000913.3 putative ArsC family reductase 2591603 yffB 946953 yffB Escherichia coli str. K-12 substr. MG1655 putative ArsC family reductase NP_416966.1 2591247 D 511145 CDS NP_416967.1 16130397 948313 2591607..2592734 1 NC_000913.3 N-succinyl-diaminopimelate deacylase 2592734 dapE 948313 dapE Escherichia coli str. K-12 substr. MG1655 N-succinyl-diaminopimelate deacylase NP_416967.1 2591607 D 511145 CDS YP_588465.1 94541122 1450286 2592762..2592962 1 NC_000913.3 putative membrane protein, UPF0370 family 2592962 ypfN 1450286 ypfN Escherichia coli str. K-12 substr. MG1655 putative membrane protein, UPF0370 family YP_588465.1 2592762 D 511145 CDS NP_416968.2 90111441 947571 complement(2593072..2593770) 1 NC_000913.3 palmitoyl-CoA esterase activity, uncertain physiological substrate 2593770 ypfH 947571 ypfH Escherichia coli str. K-12 substr. MG1655 palmitoyl-CoA esterase activity, uncertain physiological substrate NP_416968.2 2593072 R 511145 CDS NP_416969.1 16130399 946053 complement(2593844..2595859) 1 NC_000913.3 elongator methionine tRNA (ac4C34) acetyltransferase 2595859 tmcA 946053 tmcA Escherichia coli str. K-12 substr. MG1655 elongator methionine tRNA (ac4C34) acetyltransferase NP_416969.1 2593844 R 511145 CDS NP_416970.1 16130400 946956 complement(2595874..2596737) 1 NC_000913.3 putative neutral zinc metallopeptidase 2596737 ypfJ 946956 ypfJ Escherichia coli str. K-12 substr. MG1655 putative neutral zinc metallopeptidase NP_416970.1 2595874 R 511145 CDS NP_416971.1 16130401 946957 complement(2596905..2597618) 1 NC_000913.3 phosphoribosylaminoimidazole-succinocarboxamide synthetase = SAICAR synthetase; phosphoribosylaminoimidazole-succinocarboxamide synthetase 2597618 purC 946957 purC Escherichia coli str. K-12 substr. MG1655 phosphoribosylaminoimidazole-succinocarboxamide synthetase NP_416971.1 2596905 R 511145 CDS NP_416972.4 90111442 946954 complement(2597831..2598865) 1 NC_000913.3 lipoprotein-34; BamABCDE complex OM biogenesis lipoprotein 2598865 bamC 946954 bamC Escherichia coli str. K-12 substr. MG1655 BamABCDE complex OM biogenesis lipoprotein NP_416972.4 2597831 R 511145 CDS NP_416973.1 16130403 946952 complement(2598882..2599760) 1 NC_000913.3 dihydrodipicolinate synthase 2599760 dapA 946952 dapA Escherichia coli str. K-12 substr. MG1655 dihydrodipicolinate synthase NP_416973.1 2598882 R 511145 CDS NP_416974.4 90111443 946950 2599906..2600478 1 NC_000913.3 transcriptional regulation of gcv operon; transcriptional repressor, regulatory protein accessory to GcvA 2600478 gcvR 946950 gcvR Escherichia coli str. K-12 substr. MG1655 transcriptional repressor, regulatory protein accessory to GcvA NP_416974.4 2599906 D 511145 CDS NP_416975.1 16130405 946949 2600478..2600948 1 NC_000913.3 bacterioferritin comigratory protein; peroxiredoxin; thiol peroxidase, thioredoxin-dependent 2600948 bcp 946949 bcp Escherichia coli str. K-12 substr. MG1655 peroxiredoxin; thiol peroxidase, thioredoxin-dependent NP_416975.1 2600478 D 511145 CDS NP_416976.4 90111444 946959 2601201..2601818 1 NC_000913.3 hydrogenase 4 Fe-S subunit; hydrogenase 4, 4Fe-4S subunit 2601818 hyfA 946959 hyfA Escherichia coli str. K-12 substr. MG1655 hydrogenase 4, 4Fe-4S subunit NP_416976.4 2601201 D 511145 CDS NP_416977.1 16130407 946961 2601818..2603836 1 NC_000913.3 hydrogenase 4 membrane subunit; hydrogenase 4, membrane subunit 2603836 hyfB 946961 hyfB Escherichia coli str. K-12 substr. MG1655 hydrogenase 4, membrane subunit NP_416977.1 2601818 D 511145 CDS NP_416978.4 90111445 947492 2603847..2604794 1 NC_000913.3 hydrogenase 4 membrane subunit; hydrogenase 4, membrane subunit 2604794 hyfC 947492 hyfC Escherichia coli str. K-12 substr. MG1655 hydrogenase 4, membrane subunit NP_416978.4 2603847 D 511145 CDS NP_416979.1 16130409 947290 2604811..2606250 1 NC_000913.3 hydrogenase 4 membrane subunit; hydrogenase 4, membrane subunit 2606250 hyfD 947290 hyfD Escherichia coli str. K-12 substr. MG1655 hydrogenase 4, membrane subunit NP_416979.1 2604811 D 511145 CDS NP_416980.1 16130410 945298 2606262..2606912 1 NC_000913.3 hydrogenase 4 membrane subunit; hydrogenase 4, membrane subunit 2606912 hyfE 945298 hyfE Escherichia coli str. K-12 substr. MG1655 hydrogenase 4, membrane subunit NP_416980.1 2606262 D 511145 CDS NP_416981.1 16130411 946962 2606917..2608497 1 NC_000913.3 hydrogenase 4 membrane subunit; hydrogenase 4, membrane subunit 2608497 hyfF 946962 hyfF Escherichia coli str. K-12 substr. MG1655 hydrogenase 4, membrane subunit NP_416981.1 2606917 D 511145 CDS NP_416982.1 16130412 946964 2608487..2610154 1 NC_000913.3 hydrogenase 4 subunit; hydrogenase 4, subunit 2610154 hyfG 946964 hyfG Escherichia coli str. K-12 substr. MG1655 hydrogenase 4, subunit NP_416982.1 2608487 D 511145 CDS NP_416983.1 16130413 946965 2610164..2610709 1 NC_000913.3 hydrogenase 4 Fe-S subunit; hydrogenase 4, Fe-S subunit 2610709 hyfH 946965 hyfH Escherichia coli str. K-12 substr. MG1655 hydrogenase 4, Fe-S subunit NP_416983.1 2610164 D 511145 CDS NP_416984.1 16130414 946966 2610706..2611464 1 NC_000913.3 hydrogenase 4 Fe-S subunit; hydrogenase 4, Fe-S subunit 2611464 hyfI 946966 hyfI Escherichia coli str. K-12 substr. MG1655 hydrogenase 4, Fe-S subunit NP_416984.1 2610706 D 511145 CDS NP_416985.4 90111446 947713 2611457..2611870 1 NC_000913.3 putative processing element hydrogenase 4 2611870 hyfJ 947713 hyfJ Escherichia coli str. K-12 substr. MG1655 putative processing element hydrogenase 4 NP_416985.4 2611457 D 511145 CDS NP_416986.4 90111447 948886 2611900..2613912 1 NC_000913.3 putative 2-component regulator, interaction with sigma 54; hydrogenase-4 transcriptional activator 2613912 hyfR 948886 hyfR Escherichia coli str. K-12 substr. MG1655 hydrogenase-4 transcriptional activator NP_416986.4 2611900 D 511145 CDS NP_416987.1 16130417 949032 2613934..2614782 1 NC_000913.3 probable formate transporter (formate channel 2); putative formate transporter 2614782 focB 949032 focB Escherichia coli str. K-12 substr. MG1655 putative formate transporter NP_416987.1 2613934 D 511145 CDS NP_416988.1 16130418 945894 complement(2614820..2615881) 1 NC_000913.3 putative permease; putative UPF0118 family inner membrane permease 2615881 yfgO 945894 yfgO Escherichia coli str. K-12 substr. MG1655 putative UPF0118 family inner membrane permease NP_416988.1 2614820 R 511145 CDS NP_416989.1 16130419 947029 2616094..2617557 1 NC_000913.3 periplasmic metalloprotease and chaperone for OM protein maintenance and assembly 2617557 bepA 947029 bepA Escherichia coli str. K-12 substr. MG1655 periplasmic metalloprotease and chaperone for OM protein maintenance and assembly NP_416989.1 2616094 D 511145 CDS NP_416990.1 16130420 946974 2617578..2617937 1 NC_000913.3 putative oxidoreductase 2617937 yfgD 946974 yfgD Escherichia coli str. K-12 substr. MG1655 putative oxidoreductase NP_416990.1 2617578 D 511145 CDS NP_416991.2 226524737 946977 complement(2618075..2618776) 1 NC_000913.3 putative DNA replication factor; ATPase regulatory factor involved in DnaA inactivation 2618776 hda 946977 hda Escherichia coli str. K-12 substr. MG1655 ATPase regulatory factor involved in DnaA inactivation NP_416991.2 2618075 R 511145 CDS NP_416992.1 16130422 946978 complement(2618871..2620160) 1 NC_000913.3 uracil transport; uracil permease 2620160 uraA 946978 uraA Escherichia coli str. K-12 substr. MG1655 uracil permease NP_416992.1 2618871 R 511145 CDS NP_416993.2 90111448 946979 complement(2620246..2620872) 1 NC_000913.3 uracil phosphoribosyltransferase 2620872 upp 946979 upp Escherichia coli str. K-12 substr. MG1655 uracil phosphoribosyltransferase NP_416993.2 2620246 R 511145 CDS NP_416994.1 16130424 946975 2621197..2622234 1 NC_000913.3 phosphoribosylaminoimidazole synthetase = AIR synthetase; phosphoribosylaminoimidazole synthetase 2622234 purM 946975 purM Escherichia coli str. K-12 substr. MG1655 phosphoribosylaminoimidazole synthetase NP_416994.1 2621197 D 511145 CDS NP_416995.1 16130425 946973 2622234..2622872 1 NC_000913.3 phosphoribosylglycinamide formyltransferase 1 2622872 purN 946973 purN Escherichia coli str. K-12 substr. MG1655 phosphoribosylglycinamide formyltransferase 1 NP_416995.1 2622234 D 511145 CDS NP_416996.1 16130426 946971 2623044..2625110 1 NC_000913.3 polyphosphate kinase; polyphosphate kinase, component of RNA degradosome 2625110 ppk 946971 ppk Escherichia coli str. K-12 substr. MG1655 polyphosphate kinase, component of RNA degradosome NP_416996.1 2623044 D 511145 CDS NP_416997.1 16130427 946970 2625115..2626656 1 NC_000913.3 exopolyphosphatase 2626656 ppx 946970 ppx Escherichia coli str. K-12 substr. MG1655 exopolyphosphatase NP_416997.1 2625115 D 511145 CDS NP_416998.1 16130428 946968 complement(2626695..2628938) 1 NC_000913.3 putative cytochrome C-type biogenesis protein; cyclic-di-GMP phosphodiesterase, anaerobic 2628938 yfgF 946968 yfgF Escherichia coli str. K-12 substr. MG1655 cyclic-di-GMP phosphodiesterase, anaerobic NP_416998.1 2626695 R 511145 CDS NP_416999.1 16130429 946980 2629290..2629481 1 NC_000913.3 uncharacterized protein 2629481 yfgG 946980 yfgG Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_416999.1 2629290 D 511145 CDS NP_417000.1 16130430 945709 2629792..2630310 1 NC_000913.3 putative outer membrane lipoprotein; outer membrane integrity lipoprotein 2630310 yfgH 945709 yfgH Escherichia coli str. K-12 substr. MG1655 outer membrane integrity lipoprotein NP_417000.1 2629792 D 511145 CDS NP_417001.1 16130431 945168 2630326..2630865 1 NC_000913.3 putative membrane protein; nalidixic acid resistance protein, putative periplasmic protein 2630865 yfgI 945168 yfgI Escherichia coli str. K-12 substr. MG1655 nalidixic acid resistance protein, putative periplasmic protein NP_417001.1 2630326 D 511145 CDS NP_417002.1 16130432 947334 complement(2630958..2632535) 1 NC_000913.3 GMP synthetase (glutamine-hydrolyzing); GMP synthetase (glutamine aminotransferase) 2632535 guaA 947334 guaA Escherichia coli str. K-12 substr. MG1655 GMP synthetase (glutamine aminotransferase) NP_417002.1 2630958 R 511145 CDS NP_417003.1 16130433 946985 complement(2632604..2634070) 1 NC_000913.3 IMP dehydrogenase 2634070 guaB 946985 guaB Escherichia coli str. K-12 substr. MG1655 IMP dehydrogenase NP_417003.1 2632604 R 511145 CDS NP_417004.1 16130434 946988 2634232..2635602 1 NC_000913.3 exonuclease VII, large subunit 2635602 xseA 946988 xseA Escherichia coli str. K-12 substr. MG1655 exonuclease VII, large subunit NP_417004.1 2634232 D 511145 CDS NP_417005.2 90111449 946984 complement(2635599..2635814) 1 NC_000913.3 DUF1407 family protein 2635814 yfgJ 946984 yfgJ Escherichia coli str. K-12 substr. MG1655 DUF1407 family protein NP_417005.2 2635599 R 511145 CDS NP_417006.2 90111450 946983 complement(2635884..2637356) 1 NC_000913.3 putative GTP-binding factor; GTPase; multicopy suppressor of ftsJ 2637356 der 946983 der Escherichia coli str. K-12 substr. MG1655 GTPase; multicopy suppressor of ftsJ NP_417006.2 2635884 R 511145 CDS NP_417007.1 16130437 946982 complement(2637474..2638652) 1 NC_000913.3 putative dehydrogenase; BamABCDE complex OM biogenesis lipoprotein 2638652 bamB 946982 bamB Escherichia coli str. K-12 substr. MG1655 BamABCDE complex OM biogenesis lipoprotein NP_417007.1 2637474 R 511145 CDS NP_417008.1 16130438 946981 complement(2638663..2639283) 1 NC_000913.3 putative anti-RcsB factor 2639283 yfgM 946981 yfgM Escherichia coli str. K-12 substr. MG1655 putative anti-RcsB factor NP_417008.1 2638663 R 511145 CDS NP_417009.1 16130439 946989 complement(2639301..2640575) 1 NC_000913.3 histidine tRNA synthetase; histidyl tRNA synthetase 2640575 hisS 946989 hisS Escherichia coli str. K-12 substr. MG1655 histidyl tRNA synthetase NP_417009.1 2639301 R 511145 CDS NP_417010.1 16130440 946991 complement(2640686..2641804) 1 NC_000913.3 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 2641804 ispG 946991 ispG Escherichia coli str. K-12 substr. MG1655 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase NP_417010.1 2640686 R 511145 CDS NP_417011.1 16130441 946992 complement(2641831..2642844) 1 NC_000913.3 putative membrane protein; MreB assembly cytoskeletal protein 2642844 rodZ 946992 rodZ Escherichia coli str. K-12 substr. MG1655 MreB assembly cytoskeletal protein NP_417011.1 2641831 R 511145 CDS NP_417012.1 16130442 946249 complement(2643129..2644283) 1 NC_000913.3 dual specificity 23S rRNA m(2)A2503, tRNA m(2)A37 methyltransferase, SAM-dependent 2644283 rlmN 946249 rlmN Escherichia coli str. K-12 substr. MG1655 dual specificity 23S rRNA m(2)A2503, tRNA m(2)A37 methyltransferase, SAM-dependent NP_417012.1 2643129 R 511145 CDS NP_417013.1 16130443 945611 complement(2644433..2644864) 1 NC_000913.3 nucleoside diphosphate kinase; multifunctional nucleoside diphosphate kinase and apyrimidinic endonuclease and 3'-phosphodiesterase 2644864 ndk 945611 ndk Escherichia coli str. K-12 substr. MG1655 multifunctional nucleoside diphosphate kinase and apyrimidinic endonuclease and 3'-phosphodiesterase NP_417013.1 2644433 R 511145 CDS NP_417014.1 16130444 947152 complement(2645013..2647325) 1 NC_000913.3 penicillin binding protein 1C (PBP 1C); penicillin-insensitive murein repair transglycosylase; inactive transpeptidase domain 2647325 pbpC 947152 pbpC Escherichia coli str. K-12 substr. MG1655 penicillin-insensitive murein repair transglycosylase; inactive transpeptidase domain NP_417014.1 2645013 R 511145 CDS NP_417015.1 16130445 947302 complement(2647326..2652287) 1 NC_000913.3 bacterial alpha2-macroglobulin colonization factor ECAM; anti-host protease defense factor; periplasmic inner membrane-anchored lipoprotein 2652287 yfhM 947302 yfhM Escherichia coli str. K-12 substr. MG1655 bacterial alpha2-macroglobulin colonization factor ECAM; anti-host protease defense factor; periplasmic inner membrane-anchored lipoprotein NP_417015.1 2647326 R 511145 CDS NP_417016.4 90111451 946993 2652494..2653339 1 NC_000913.3 putative thiosulfate sulfurtransferase; 3-mercaptopyruvate sulfurtransferase 2653339 sseA 946993 sseA Escherichia coli str. K-12 substr. MG1655 3-mercaptopyruvate sulfurtransferase NP_417016.4 2652494 D 511145 CDS NP_417017.4 90111452 946994 complement(2654157..2654933) 1 NC_000913.3 enhanced serine sensitivity; rhodanase-like enzyme, sulfur transfer from thiosulfate 2654933 sseB 946994 sseB Escherichia coli str. K-12 substr. MG1655 rhodanase-like enzyme, sulfur transfer from thiosulfate NP_417017.4 2654157 R 511145 CDS NP_417018.4 90111453 948766 complement(2655075..2656358) 1 NC_000913.3 putative peptidase; aminopeptidase B 2656358 pepB 948766 pepB Escherichia coli str. K-12 substr. MG1655 aminopeptidase B NP_417018.4 2655075 R 511145 CDS NP_417019.1 16130449 945196 complement(2656536..2656736) 1 NC_000913.3 Iron binding protein associated with IscS; putative molecular adaptor of IscS function 2656736 iscX 945196 iscX Escherichia coli str. K-12 substr. MG1655 Iron binding protein associated with IscS; putative molecular adaptor of IscS function NP_417019.1 2656536 R 511145 CDS NP_417020.1 16130450 947160 complement(2656748..2657083) 1 NC_000913.3 [2FE-2S] ferredoxin, electron carrer protein; [2Fe-2S] ferredoxin 2657083 fdx 947160 fdx Escherichia coli str. K-12 substr. MG1655 [2Fe-2S] ferredoxin NP_417020.1 2656748 R 511145 CDS NP_417021.1 16130451 944885 complement(2657085..2658935) 1 NC_000913.3 DnaK-homologue chaperone Hsc66; DnaK-like molecular chaperone specific for IscU 2658935 hscA 944885 hscA Escherichia coli str. K-12 substr. MG1655 DnaK-like molecular chaperone specific for IscU NP_417021.1 2657085 R 511145 CDS NP_417022.1 16130452 946995 complement(2658952..2659467) 1 NC_000913.3 HscA co-chaperone, J domain-containing protein Hsc56; IscU-specific chaperone HscAB 2659467 hscB 946995 hscB Escherichia coli str. K-12 substr. MG1655 HscA co-chaperone, J domain-containing protein Hsc56; IscU-specific chaperone HscAB NP_417022.1 2658952 R 511145 CDS NP_417023.1 16130453 946999 complement(2659563..2659886) 1 NC_000913.3 FeS cluster assembly protein 2659886 iscA 946999 iscA Escherichia coli str. K-12 substr. MG1655 FeS cluster assembly protein NP_417023.1 2659563 R 511145 CDS NP_417024.1 16130454 947002 complement(2659903..2660289) 1 NC_000913.3 iron-sulfur cluster assembly scaffold protein 2660289 iscU 947002 iscU Escherichia coli str. K-12 substr. MG1655 iron-sulfur cluster assembly scaffold protein NP_417024.1 2659903 R 511145 CDS YP_026169.1 49176235 947004 complement(2660317..2661531) 1 NC_000913.3 cysteine desulfurase; cysteine desulfurase (tRNA sulfurtransferase) PLP-dependent; cysteine desulfurase (tRNA sulfurtransferase), PLP-dependent 2661531 iscS 947004 iscS Escherichia coli str. K-12 substr. MG1655 cysteine desulfurase (tRNA sulfurtransferase), PLP-dependent YP_026169.1 2660317 R 511145 CDS NP_417026.1 16130456 945279 complement(2661643..2662131) 1 NC_000913.3 Fe-S cluster-containing transcription factor; transcriptional repressor of iscRSUA operon; isc operon transcriptional repressor; suf operon transcriptional activator; oxidative stress- and iron starvation-inducible; autorepressor 2662131 iscR 945279 iscR Escherichia coli str. K-12 substr. MG1655 isc operon transcriptional repressor; suf operon transcriptional activator; oxidative stress- and iron starvation-inducible; autorepressor NP_417026.1 2661643 R 511145 CDS NP_417027.1 16130457 948610 complement(2662583..2663323) 1 NC_000913.3 tRNA mC32,mU32 2'-O-methyltransferase, SAM-dependent 2663323 trmJ 948610 trmJ Escherichia coli str. K-12 substr. MG1655 tRNA mC32,mU32 2'-O-methyltransferase, SAM-dependent NP_417027.1 2662583 R 511145 CDS NP_417028.1 16130458 947285 2663442..2664245 1 NC_000913.3 inositol-1-monophosphatase; inositol monophosphatase 2664245 suhB 947285 suhB Escherichia coli str. K-12 substr. MG1655 inositol monophosphatase NP_417028.1 2663442 D 511145 CDS NP_417029.4 226524738 945059 2664390..2665244 1 NC_000913.3 putative enzyme (3.4.-); putative S9 family prolyl oligopeptidase 2665244 yfhR 945059 yfhR Escherichia coli str. K-12 substr. MG1655 putative S9 family prolyl oligopeptidase NP_417029.4 2664390 D 511145 CDS NP_417030.2 90111454 947009 2665435..2666715 1 NC_000913.3 stationary phase inducible protein 2666715 csiE 947009 csiE Escherichia coli str. K-12 substr. MG1655 stationary phase inducible protein NP_417030.2 2665435 D 511145 CDS NP_417031.1 16130461 947007 complement(2666707..2667846) 1 NC_000913.3 MFS (major facilitator superfamily) transporter; putative 3-phenylpropionic transporter 2667846 hcaT 947007 hcaT Escherichia coli str. K-12 substr. MG1655 putative 3-phenylpropionic transporter NP_417031.1 2666707 R 511145 CDS NP_417032.1 16130462 947000 complement(2668006..2668896) 1 NC_000913.3 transcriptional activator of hca cluster; completely contained in another CDS; hca operon transcriptional regulator 2668896 hcaR 947000 hcaR Escherichia coli str. K-12 substr. MG1655 hca operon transcriptional regulator NP_417032.1 2668006 R 511145 CDS YP_008592385.1 556503836 14678510 complement(2668006..2668071) 1 NC_000913.3 completely contained in another CDS; 3-hydroxypropionic acid resistance peptide 2668071 iroK 14678510 iroK Escherichia coli str. K-12 substr. MG1655 3-hydroxypropionic acid resistance peptide YP_008592385.1 2668006 R 511145 CDS NP_417033.1 16130463 946998 2669032..2670393 1 NC_000913.3 3-phenylpropionate dioxygenase, large (alpha) subunit 2670393 hcaE 946998 hcaE Escherichia coli str. K-12 substr. MG1655 3-phenylpropionate dioxygenase, large (alpha) subunit NP_417033.1 2669032 D 511145 CDS NP_417034.1 16130464 946997 2670390..2670908 1 NC_000913.3 small terminal subunit of phenylpropionate dioxygenase; 3-phenylpropionate dioxygenase, small (beta) subunit 2670908 hcaF 946997 hcaF Escherichia coli str. K-12 substr. MG1655 3-phenylpropionate dioxygenase, small (beta) subunit NP_417034.1 2670390 D 511145 CDS NP_417035.1 16130465 947015 2670908..2671228 1 NC_000913.3 ferredoxin subunit of phenylpropionate dioxygenase; 3-phenylpropionate dioxygenase, ferredoxin subunit 2671228 hcaC 947015 hcaC Escherichia coli str. K-12 substr. MG1655 3-phenylpropionate dioxygenase, ferredoxin subunit NP_417035.1 2670908 D 511145 CDS NP_417036.1 16130466 945346 2671225..2672037 1 NC_000913.3 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase 2672037 hcaB 945346 hcaB Escherichia coli str. K-12 substr. MG1655 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase NP_417036.1 2671225 D 511145 CDS NP_417037.1 16130467 945427 2672047..2673249 1 NC_000913.3 ferredoxin reductase subunit of phenylpropionate dioxygenase; phenylpropionate dioxygenase, ferredoxin reductase subunit 2673249 hcaD 945427 hcaD Escherichia coli str. K-12 substr. MG1655 phenylpropionate dioxygenase, ferredoxin reductase subunit NP_417037.1 2672047 D 511145 CDS NP_417038.4 145698300 947365 2673346..2673768 1 NC_000913.3 DoxX family inner membrane protein 2673768 yphA 947365 yphA Escherichia coli str. K-12 substr. MG1655 DoxX family inner membrane protein NP_417038.4 2673346 D 511145 CDS NP_417039.1 16130469 947017 complement(2673816..2674688) 1 NC_000913.3 mutarotase superfamily protein, YphB family 2674688 yphB 947017 yphB Escherichia coli str. K-12 substr. MG1655 mutarotase superfamily protein, YphB family NP_417039.1 2673816 R 511145 CDS NP_417040.2 90111455 947019 complement(2674700..2675761) 1 NC_000913.3 putative oxidoreductase; putative Zn-dependent NAD(P)-binding oxidoreductase 2675761 yphC 947019 yphC Escherichia coli str. K-12 substr. MG1655 putative Zn-dependent NAD(P)-binding oxidoreductase NP_417040.2 2674700 R 511145 CDS NP_417041.1 16130471 949063 complement(2675827..2676825) 1 NC_000913.3 putative transport system permease protein; inner membrane putative ABC superfamily sugar transporter permease 2676825 yphD 949063 yphD Escherichia coli str. K-12 substr. MG1655 inner membrane putative ABC superfamily sugar transporter permease NP_417041.1 2675827 R 511145 CDS NP_417042.1 16130472 948990 complement(2676850..2678361) 1 NC_000913.3 putative ATP-binding component of a transport system; putative sugar transporter subunit of ABC superfamily, ATP-binding component 2678361 yphE 948990 yphE Escherichia coli str. K-12 substr. MG1655 putative sugar transporter subunit of ABC superfamily, ATP-binding component NP_417042.1 2676850 R 511145 CDS NP_417043.1 16130473 947020 complement(2678384..2679367) 1 NC_000913.3 putative LACI-type transcriptional regulator; putative ABC superfamily sugar transporter periplasmic-binding protein 2679367 yphF 947020 yphF Escherichia coli str. K-12 substr. MG1655 putative ABC superfamily sugar transporter periplasmic-binding protein NP_417043.1 2678384 R 511145 CDS NP_417044.4 162135907 947021 complement(2679464..2682745) 1 NC_000913.3 DUF4380 domain-containing TPR repeat protein 2682745 yphG 947021 yphG Escherichia coli str. K-12 substr. MG1655 DUF4380 domain-containing TPR repeat protein NP_417044.4 2679464 R 511145 CDS NP_417045.4 90111457 947023 2682863..2684056 1 NC_000913.3 putative NAGC-like transcriptional regulator; putative DNA-binding transcriptional regulator 2684056 yphH 947023 yphH Escherichia coli str. K-12 substr. MG1655 putative DNA-binding transcriptional regulator NP_417045.4 2682863 D 511145 CDS NP_417046.1 16130476 947022 complement(2684254..2685507) 1 NC_000913.3 serine hydroxymethyltransferase 2685507 glyA 947022 glyA Escherichia coli str. K-12 substr. MG1655 serine hydroxymethyltransferase NP_417046.1 2684254 R 511145 CDS NP_417047.1 16130477 947018 2685835..2687025 1 NC_000913.3 dihydropteridine reductase, ferrisiderophore reductase activity; fused nitric oxide dioxygenase/dihydropteridine reductase 2 2687025 hmp 947018 hmp Escherichia coli str. K-12 substr. MG1655 fused nitric oxide dioxygenase/dihydropteridine reductase 2 NP_417047.1 2685835 D 511145 CDS NP_417048.1 16130478 947016 complement(2687070..2687408) 1 NC_000913.3 regulatory protein P-II for glutamine synthetase 2687408 glnB 947016 glnB Escherichia coli str. K-12 substr. MG1655 regulatory protein P-II for glutamine synthetase NP_417048.1 2687070 R 511145 CDS NP_417049.1 16130479 947042 complement(2687469..2688803) 1 NC_000913.3 putative 2-component transcriptional regulator; response regulator regulating glmY sRNA in two-component system with sensor protein GlrK 2688803 glrR 947042 glrR Escherichia coli str. K-12 substr. MG1655 response regulator regulating glmY sRNA in two-component system with sensor protein GlrK NP_417049.1 2687469 R 511145 CDS NP_417050.1 16130480 947010 complement(2688793..2689506) 1 NC_000913.3 putative alpha helix protein; putative outer membrane protein modulating the QseEF response 2689506 yfhG 947010 yfhG Escherichia coli str. K-12 substr. MG1655 putative outer membrane protein modulating the QseEF response NP_417050.1 2688793 R 511145 CDS NP_417051.2 90111458 947013 complement(2689671..2691098) 1 NC_000913.3 putative 2-component sensor protein; sensor protein kinase regulating glmY sRNA in two-component system with response regulator GlrR 2691098 glrK 947013 glrK Escherichia coli str. K-12 substr. MG1655 sensor protein kinase regulating glmY sRNA in two-component system with response regulator GlrR NP_417051.2 2689671 R 511145 CDS YP_026170.1 49176239 947032 complement(2691656..2695543) 1 NC_000913.3 phosphoribosylformyl-glycineamide synthetase = FGAM synthetase; phosphoribosylformyl-glycineamide synthetase 2695543 purL 947032 purL Escherichia coli str. K-12 substr. MG1655 phosphoribosylformyl-glycineamide synthetase YP_026170.1 2691656 R 511145 CDS NP_417053.2 171701683 947028 2695801..2697357 1 NC_000913.3 putative periplasmic binding transport protein; membrane-bound lytic transglycosylase F, murein hydrolase 2697357 mltF 947028 mltF Escherichia coli str. K-12 substr. MG1655 membrane-bound lytic transglycosylase F, murein hydrolase NP_417053.2 2695801 D 511145 CDS NP_417054.2 145698301 947027 complement(2697354..2697857) 1 NC_000913.3 tRNA-specific adenosine deaminase 2697857 tadA 947027 tadA Escherichia coli str. K-12 substr. MG1655 tRNA-specific adenosine deaminase NP_417054.2 2697354 R 511145 CDS NP_417055.4 90111459 947026 complement(2697915..2698550) 1 NC_000913.3 phosphatidylglycerophosphatase C, membrane bound 2698550 pgpC 947026 pgpC Escherichia coli str. K-12 substr. MG1655 phosphatidylglycerophosphatase C, membrane bound NP_417055.4 2697915 R 511145 CDS NP_417056.2 90111460 947030 2698759..2699607 1 NC_000913.3 putative DNA-binding transcriptional regulator 2699607 yfhH 947030 yfhH Escherichia coli str. K-12 substr. MG1655 putative DNA-binding transcriptional regulator NP_417056.2 2698759 D 511145 CDS NP_417057.1 16130487 947031 2699663..2699923 1 NC_000913.3 putative 4Fe-4S cluster-containing protein 2699923 yfhL 947031 yfhL Escherichia coli str. K-12 substr. MG1655 putative 4Fe-4S cluster-containing protein NP_417057.1 2699663 D 511145 CDS YP_002791251.1 226524739 7751620 complement(2700117..2700197) 1 NC_000913.3 toxic membrane protein 2700197 shoB 7751620 shoB Escherichia coli str. K-12 substr. MG1655 toxic membrane protein YP_002791251.1 2700117 R 511145 CDS NP_417058.1 16130488 947037 complement(2700618..2700998) 1 NC_000913.3 CoA:apo-[acyl-carrier-protein] pantetheinephosphotransferase; holo-[acyl-carrier-protein] synthase 1 2700998 acpS 947037 acpS Escherichia coli str. K-12 substr. MG1655 holo-[acyl-carrier-protein] synthase 1 NP_417058.1 2700618 R 511145 CDS NP_417059.1 16130489 947039 complement(2700998..2701729) 1 NC_000913.3 pyridoxine biosynthesis; pyridoxine 5'-phosphate synthase 2701729 pdxJ 947039 pdxJ Escherichia coli str. K-12 substr. MG1655 pyridoxine 5'-phosphate synthase NP_417059.1 2700998 R 511145 CDS NP_417060.1 16130490 947038 complement(2701741..2702469) 1 NC_000913.3 protein interacts with RecR and possibly RecF proteins; gap repair protein 2702469 recO 947038 recO Escherichia coli str. K-12 substr. MG1655 gap repair protein NP_417060.1 2701741 R 511145 CDS NP_417061.1 16130491 947036 complement(2702481..2703386) 1 NC_000913.3 GTP-binding protein; membrane-associated, 16S rRNA-binding GTPase 2703386 era 947036 era Escherichia coli str. K-12 substr. MG1655 membrane-associated, 16S rRNA-binding GTPase NP_417061.1 2702481 R 511145 CDS NP_417062.1 16130492 947033 complement(2703383..2704063) 1 NC_000913.3 RNase III, ds RNA; RNase III 2704063 rnc 947033 rnc Escherichia coli str. K-12 substr. MG1655 RNase III NP_417062.1 2703383 R 511145 CDS NP_417063.1 16130493 947040 complement(2704335..2705309) 1 NC_000913.3 leader peptidase (signal peptidase I) 2705309 lepB 947040 lepB Escherichia coli str. K-12 substr. MG1655 leader peptidase (signal peptidase I) NP_417063.1 2704335 R 511145 CDS NP_417064.1 16130494 947051 complement(2705325..2707124) 1 NC_000913.3 GTP-binding elongation factor, may be inner membrane protein; back-translocating elongation factor EF4, GTPase 2707124 lepA 947051 lepA Escherichia coli str. K-12 substr. MG1655 back-translocating elongation factor EF4, GTPase NP_417064.1 2705325 R 511145 CDS NP_417065.1 16130495 947052 complement(2707322..2707801) 1 NC_000913.3 sigma-E factor, negative regulatory protein; SoxR iron-sulfur cluster reduction factor component; with RsxABCDEG 2707801 rseC 947052 rseC Escherichia coli str. K-12 substr. MG1655 SoxR iron-sulfur cluster reduction factor component; with RsxABCDEG NP_417065.1 2707322 R 511145 CDS NP_417066.1 16130496 947054 complement(2707798..2708754) 1 NC_000913.3 regulates activity of sigma-E factor; anti-sigma E factor, binds RseA 2708754 rseB 947054 rseB Escherichia coli str. K-12 substr. MG1655 anti-sigma E factor, binds RseA NP_417066.1 2707798 R 511145 CDS NP_417067.1 16130497 947053 complement(2708754..2709404) 1 NC_000913.3 sigma-E factor, negative regulatory protein; anti-sigma factor 2709404 rseA 947053 rseA Escherichia coli str. K-12 substr. MG1655 anti-sigma factor NP_417067.1 2708754 R 511145 CDS NP_417068.1 16130498 947050 complement(2709437..2710012) 1 NC_000913.3 RNA polymerase, sigma-E factor; heat shock and oxidative stress; RNA polymerase sigma E factor 2710012 rpoE 947050 rpoE Escherichia coli str. K-12 substr. MG1655 RNA polymerase sigma E factor NP_417068.1 2709437 R 511145 CDS NP_417069.1 16130499 947049 2710420..2712042 1 NC_000913.3 quinolinate synthetase, B protein; quinolinate synthase, L-aspartate oxidase (B protein) subunit 2712042 nadB 947049 nadB Escherichia coli str. K-12 substr. MG1655 quinolinate synthase, L-aspartate oxidase (B protein) subunit NP_417069.1 2710420 D 511145 CDS NP_417070.2 90111461 947047 complement(2712027..2712764) 1 NC_000913.3 putative enzyme; tRNA1(Val) (adenine(37)-N6)-methyltransferase 2712764 trmN 947047 trmN Escherichia coli str. K-12 substr. MG1655 tRNA1(Val) (adenine(37)-N6)-methyltransferase NP_417070.2 2712027 R 511145 CDS NP_417071.1 16130501 947055 2712896..2714230 1 NC_000913.3 ATP-dependent RNA helicase 2714230 srmB 947055 srmB Escherichia coli str. K-12 substr. MG1655 ATP-dependent RNA helicase NP_417071.1 2712896 D 511145 CDS NP_417072.4 90111462 947064 complement(2714439..2715320) 1 NC_000913.3 putative transcriptional regulator LYSR-type; putative DNA-binding transcriptional regulator 2715320 yfiE 947064 yfiE Escherichia coli str. K-12 substr. MG1655 putative DNA-binding transcriptional regulator NP_417072.4 2714439 R 511145 CDS NP_417073.1 16130503 947065 2715423..2716010 1 NC_000913.3 cysteine and O-acetylserine exporter 2716010 eamB 947065 eamB Escherichia coli str. K-12 substr. MG1655 cysteine and O-acetylserine exporter NP_417073.1 2715423 D 511145 CDS NP_417074.1 16130504 947068 complement(2716066..2716449) 1 NC_000913.3 putative formate acetyltransferase; autonomous glycyl radical cofactor 2716449 grcA 947068 grcA Escherichia coli str. K-12 substr. MG1655 autonomous glycyl radical cofactor NP_417074.1 2716066 R 511145 CDS NP_417075.1 16130505 947067 2716754..2717443 1 NC_000913.3 uracil-DNA-glycosylase 2717443 ung 947067 ung Escherichia coli str. K-12 substr. MG1655 uracil-DNA-glycosylase NP_417075.1 2716754 D 511145 CDS NP_417076.1 16130506 947066 complement(2717491..2718528) 1 NC_000913.3 putative methyltransferase 2718528 yfiF 947066 yfiF Escherichia coli str. K-12 substr. MG1655 putative methyltransferase NP_417076.1 2717491 R 511145 CDS NP_417077.1 16130507 947062 2718735..2719154 1 NC_000913.3 putative thioredoxin-like protein; thioredoxin 2 2719154 trxC 947062 trxC Escherichia coli str. K-12 substr. MG1655 thioredoxin 2 NP_417077.1 2718735 D 511145 CDS NP_417078.4 90111463 947057 2719223..2719921 1 NC_000913.3 DTW domain protein 2719921 yfiP 947057 yfiP Escherichia coli str. K-12 substr. MG1655 DTW domain protein NP_417078.4 2719223 D 511145 CDS NP_417079.1 16130509 947056 2719953..2722613 1 NC_000913.3 protein lysine acetyltransferase 2722613 pka 947056 pka Escherichia coli str. K-12 substr. MG1655 protein lysine acetyltransferase NP_417079.1 2719953 D 511145 CDS NP_417080.4 90111464 947059 2722727..2724082 1 NC_000913.3 phosphatidylserine synthase; phospholipid synthesis; phosphatidylserine synthase (CDP-diacylglycerol-serine O-phosphatidyltransferase) 2724082 pssA 947059 pssA Escherichia coli str. K-12 substr. MG1655 phosphatidylserine synthase (CDP-diacylglycerol-serine O-phosphatidyltransferase) NP_417080.4 2722727 D 511145 CDS NP_417081.2 145698302 947060 2724128..2724451 1 NC_000913.3 putative lipoprotein 2724451 yfiM 947060 yfiM Escherichia coli str. K-12 substr. MG1655 putative lipoprotein NP_417081.2 2724128 D 511145 CDS NP_417082.1 16130512 947069 complement(2724448..2725746) 1 NC_000913.3 alpha-ketoglutarate permease; alpha-ketoglutarate transporter 2725746 kgtP 947069 kgtP Escherichia coli str. K-12 substr. MG1655 alpha-ketoglutarate transporter NP_417082.1 2724448 R 511145 CDS NP_417083.1 16130513 947077 complement(2731600..2734173) 1 NC_000913.3 heat shock protein; protein disaggregation chaperone 2734173 clpB 947077 clpB Escherichia coli str. K-12 substr. MG1655 protein disaggregation chaperone NP_417083.1 2731600 R 511145 CDS NP_417084.1 16130514 947089 complement(2734303..2735034) 1 NC_000913.3 UPF0124 family protein 2735034 yfiH 947089 yfiH Escherichia coli str. K-12 substr. MG1655 UPF0124 family protein NP_417084.1 2734303 R 511145 CDS NP_417085.1 16130515 947087 complement(2735031..2736011) 1 NC_000913.3 23S rRNA pseudouridine(1911,1915,1917) synthase 2736011 rluD 947087 rluD Escherichia coli str. K-12 substr. MG1655 23S rRNA pseudouridine(1911,1915,1917) synthase NP_417085.1 2735031 R 511145 CDS NP_417086.1 16130516 947086 2736146..2736883 1 NC_000913.3 BamABCDE complex OM biogenesis lipoprotein 2736883 bamD 947086 bamD Escherichia coli str. K-12 substr. MG1655 BamABCDE complex OM biogenesis lipoprotein NP_417086.1 2736146 D 511145 CDS NP_417088.1 16130518 947129 2737154..2737495 1 NC_000913.3 putative yhbH sigma 54 modulator; cold shock protein associated with 30S ribosomal subunit 2737495 raiA 947129 raiA Escherichia coli str. K-12 substr. MG1655 cold shock protein associated with 30S ribosomal subunit NP_417088.1 2737154 D 511145 CDS NP_417089.1 16130519 947080 2737599..2737646 1 NC_000913.3 leader peptide of chorismate mutase-P-prephenate dehydratase; pheA gene leader peptide 2737646 pheL 947080 pheL Escherichia coli str. K-12 substr. MG1655 pheA gene leader peptide NP_417089.1 2737599 D 511145 CDS NP_417090.1 16130520 947081 2737745..2738905 1 NC_000913.3 chorismate mutase-P and prephenate dehydratase; chorismate mutase and prephenate dehydratase, P-protein 2738905 pheA 947081 pheA Escherichia coli str. K-12 substr. MG1655 chorismate mutase and prephenate dehydratase, P-protein NP_417090.1 2737745 D 511145 CDS NP_417091.1 16130521 947115 complement(2738948..2740069) 1 NC_000913.3 chorismate mutase-T and prephenate dehydrogenase; fused chorismate mutase T/prephenate dehydrogenase 2740069 tyrA 947115 tyrA Escherichia coli str. K-12 substr. MG1655 fused chorismate mutase T/prephenate dehydrogenase NP_417091.1 2738948 R 511145 CDS NP_417092.1 16130522 947084 complement(2740080..2741150) 1 NC_000913.3 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase, tyrosine repressible); 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, tyrosine-repressible 2741150 aroF 947084 aroF Escherichia coli str. K-12 substr. MG1655 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, tyrosine-repressible NP_417092.1 2740080 R 511145 CDS NP_417093.2 90111465 947106 2741360..2741725 1 NC_000913.3 lipoprotein 2741725 yfiL 947106 yfiL Escherichia coli str. K-12 substr. MG1655 lipoprotein NP_417093.2 2741360 D 511145 CDS NP_417094.1 16130524 947090 2741875..2742393 1 NC_000913.3 putative periplasmic inhibitor of YfiN activity 2742393 yfiR 947090 yfiR Escherichia coli str. K-12 substr. MG1655 putative periplasmic inhibitor of YfiN activity NP_417094.1 2741875 D 511145 CDS NP_417095.1 16130525 947091 2742383..2743609 1 NC_000913.3 putative membrane-anchored diguanylate cyclase with an N-terminal periplasmic domain 2743609 yfiN 947091 yfiN Escherichia coli str. K-12 substr. MG1655 putative membrane-anchored diguanylate cyclase with an N-terminal periplasmic domain NP_417095.1 2742383 D 511145 CDS NP_417096.1 16130526 947094 2743625..2744107 1 NC_000913.3 putative outer membrane protein; OM lipoprotein putative positive effector of YfiN activity 2744107 yfiB 947094 yfiB Escherichia coli str. K-12 substr. MG1655 OM lipoprotein putative positive effector of YfiN activity NP_417096.1 2743625 D 511145 CDS NP_417097.1 16130527 947096 complement(2744183..2744530) 1 NC_000913.3 50S ribosomal subunit protein L19 2744530 rplS 947096 rplS Escherichia coli str. K-12 substr. MG1655 50S ribosomal subunit protein L19 NP_417097.1 2744183 R 511145 CDS NP_417098.1 16130528 947099 complement(2744572..2745339) 1 NC_000913.3 tRNA methyltransferase; tRNA (guanine-7-)-methyltransferase; tRNA m(1)G37 methyltransferase, SAM-dependent 2745339 trmD 947099 trmD Escherichia coli str. K-12 substr. MG1655 tRNA m(1)G37 methyltransferase, SAM-dependent NP_417098.1 2744572 R 511145 CDS NP_417099.4 90111466 947101 complement(2745370..2745918) 1 NC_000913.3 16S rRNA processing protein 2745918 rimM 947101 rimM Escherichia coli str. K-12 substr. MG1655 16S rRNA processing protein NP_417099.4 2745370 R 511145 CDS NP_417100.1 16130530 947103 complement(2745937..2746185) 1 NC_000913.3 30S ribosomal subunit protein S16 2746185 rpsP 947103 rpsP Escherichia coli str. K-12 substr. MG1655 30S ribosomal subunit protein S16 NP_417100.1 2745937 R 511145 CDS NP_417101.1 16130531 947102 complement(2746434..2747795) 1 NC_000913.3 GTP-binding export factor binds to signal sequence, GTP and RNA; Signal Recognition Particle (SRP) component with 4.5S RNA (ffs) 2747795 ffh 947102 ffh Escherichia coli str. K-12 substr. MG1655 Signal Recognition Particle (SRP) component with 4.5S RNA (ffs) NP_417101.1 2746434 R 511145 CDS NP_417102.4 145698303 947098 2747962..2748753 1 NC_000913.3 cytochrome c assembly protein family inner membrane protein 2748753 ypjD 947098 ypjD Escherichia coli str. K-12 substr. MG1655 cytochrome c assembly protein family inner membrane protein NP_417102.4 2747962 D 511145 CDS YP_026171.3 145698304 2847739 2748774..2750060 1 NC_000913.3 putative membrane protein; UPF0053 family inner membrane protein 2750060 yfjD 2847739 yfjD Escherichia coli str. K-12 substr. MG1655 UPF0053 family inner membrane protein YP_026171.3 2748774 D 511145 CDS NP_417104.1 16130533 947097 complement(2750115..2750708) 1 NC_000913.3 phage lambda replication; host DNA synthesis; heat shock protein; protein repair; heat shock protein 2750708 grpE 947097 grpE Escherichia coli str. K-12 substr. MG1655 heat shock protein NP_417104.1 2750115 R 511145 CDS NP_417105.1 16130534 947092 2750831..2751709 1 NC_000913.3 NAD kinase 2751709 nadK 947092 nadK Escherichia coli str. K-12 substr. MG1655 NAD kinase NP_417105.1 2750831 D 511145 CDS YP_026172.1 49176247 947105 2751795..2753456 1 NC_000913.3 protein used in recombination and DNA repair; recombination and repair protein 2753456 recN 947105 recN Escherichia coli str. K-12 substr. MG1655 recombination and repair protein YP_026172.1 2751795 D 511145 CDS NP_417107.2 90111468 945583 2753605..2753946 1 NC_000913.3 small membrane protein A; lipoprotein component of BamABCDE OM biogenesis complex 2753946 bamE 945583 bamE Escherichia coli str. K-12 substr. MG1655 lipoprotein component of BamABCDE OM biogenesis complex NP_417107.2 2753605 D 511145 CDS NP_417108.4 90111469 945078 complement(2754008..2754298) 1 NC_000913.3 UPF0125 family protein 2754298 ratB 945078 ratB Escherichia coli str. K-12 substr. MG1655 UPF0125 family protein NP_417108.4 2754008 R 511145 CDS NP_417109.1 16130538 945614 complement(2754288..2754764) 1 NC_000913.3 toxic UPF0083 family protein inhibitor of 70S ribosome formation 2754764 ratA 945614 ratA Escherichia coli str. K-12 substr. MG1655 toxic UPF0083 family protein inhibitor of 70S ribosome formation NP_417109.1 2754288 R 511145 CDS NP_417110.1 16130539 947296 2754896..2755378 1 NC_000913.3 small protein B; trans-translation protein 2755378 smpB 947296 smpB Escherichia coli str. K-12 substr. MG1655 trans-translation protein NP_417110.1 2754896 D 511145 CDS NP_417111.1 16130540 946160 2756159..2757400 1 NC_000913.3 prophage CP4-57 integrase; CP4-57 prophage; integrase 2757400 intA 946160 intA Escherichia coli str. K-12 substr. MG1655 CP4-57 prophage; integrase NP_417111.1 2756159 D 511145 CDS NP_417112.1 16130541 946123 complement(2757644..2758600) 1 NC_000913.3 putative histone; CP4-57 prophage; uncharacterized protein 2758600 yfjH 946123 yfjH Escherichia coli str. K-12 substr. MG1655 CP4-57 prophage; uncharacterized protein NP_417112.1 2757644 R 511145 CDS NP_417113.1 16130542 946758 2758644..2758856 1 NC_000913.3 prophage CP4-57 regulatory protein alpA; CP4-57 prophage; DNA-binding transcriptional activator 2758856 alpA 946758 alpA Escherichia coli str. K-12 substr. MG1655 CP4-57 prophage; DNA-binding transcriptional activator NP_417113.1 2758644 D 511145 CDS NP_417114.1 16130543 944764 2758985..2760394 1 NC_000913.3 CP4-57 prophage; uncharacterized protein 2760394 yfjI 944764 yfjI Escherichia coli str. K-12 substr. MG1655 CP4-57 prophage; uncharacterized protein NP_417114.1 2758985 D 511145 CDS NP_417115.1 16130544 947112 2760547..2761173 1 NC_000913.3 CP4-57 prophage; uncharacterized protein 2761173 yfjJ 947112 yfjJ Escherichia coli str. K-12 substr. MG1655 CP4-57 prophage; uncharacterized protein NP_417115.1 2760547 D 511145 CDS NP_417116.1 16130545 947111 complement(2761351..2763540) 1 NC_000913.3 DEAD/H helicase-like protein, CP4-57 putative defective prophage 2763540 yfjK 947111 yfjK Escherichia coli str. K-12 substr. MG1655 DEAD/H helicase-like protein, CP4-57 putative defective prophage NP_417116.1 2761351 R 511145 CDS NP_417117.1 16130546 947110 complement(2763537..2765153) 1 NC_000913.3 CP4-57 putative defective prophage, DUF4297/DUF1837 polymorphic toxin family protein 2765153 yfjL 947110 yfjL Escherichia coli str. K-12 substr. MG1655 CP4-57 putative defective prophage, DUF4297/DUF1837 polymorphic toxin family protein NP_417117.1 2763537 R 511145 CDS NP_417118.1 16130547 947108 complement(2765513..2765776) 1 NC_000913.3 CP4-57 prophage; uncharacterized protein 2765776 yfjM 947108 yfjM Escherichia coli str. K-12 substr. MG1655 CP4-57 prophage; uncharacterized protein NP_417118.1 2765513 R 511145 CDS NP_417119.1 16130548 947107 2765918..2766991 1 NC_000913.3 putative cell division protein; CP4-57 prophage; RNase LS 2766991 rnlA 947107 rnlA Escherichia coli str. K-12 substr. MG1655 CP4-57 prophage; RNase LS NP_417119.1 2765918 D 511145 CDS NP_417120.2 90111470 947113 2766984..2767355 1 NC_000913.3 CP4-57 prophage; uncharacterized protein 2767355 rnlB 947113 rnlB Escherichia coli str. K-12 substr. MG1655 CP4-57 prophage; uncharacterized protein NP_417120.2 2766984 D 511145 CDS YP_026173.1 49176249 947124 2767710..2768573 1 NC_000913.3 putative GTP-binding protein; CP4-57 prophage; 50S ribosome-binding GTPase family protein 2768573 yfjP 947124 yfjP Escherichia coli str. K-12 substr. MG1655 CP4-57 prophage; 50S ribosome-binding GTPase family protein YP_026173.1 2767710 D 511145 CDS NP_417122.1 16130551 947127 2768665..2769486 1 NC_000913.3 CP4-57 prophage; uncharacterized protein 2769486 yfjQ 947127 yfjQ Escherichia coli str. K-12 substr. MG1655 CP4-57 prophage; uncharacterized protein NP_417122.1 2768665 D 511145 CDS NP_417123.1 16130552 947309 2769703..2770404 1 NC_000913.3 CP4-57 prophage; putative DNA-binding transcriptional regulator 2770404 yfjR 947309 yfjR Escherichia coli str. K-12 substr. MG1655 CP4-57 prophage; putative DNA-binding transcriptional regulator NP_417123.1 2769703 D 511145 CDS YP_026174.2 90111471 2847710 2770445..2770681 1 NC_000913.3 CP4-57 prophage; putative inner membrane protein 2770681 ypjK 2847710 ypjK Escherichia coli str. K-12 substr. MG1655 CP4-57 prophage; putative inner membrane protein YP_026174.2 2770445 D 511145 CDS NP_417124.4 90111472 945668 2770681..2771124 1 NC_000913.3 CP4-57 prophage; uncharacterized protein 2771124 yfjS 945668 yfjS Escherichia coli str. K-12 substr. MG1655 CP4-57 prophage; uncharacterized protein NP_417124.4 2770681 D 511145 CDS NP_417125.1 16130554 947616 2771148..2771615 1 NC_000913.3 CP4-57 prophage; putative periplasmic protein 2771615 yfjT 947616 yfjT Escherichia coli str. K-12 substr. MG1655 CP4-57 prophage; putative periplasmic protein NP_417125.1 2771148 D 511145 CDS b2638 945062 complement(2772002..2772154) 1 NC_000913.3 CP4-57 prophage; conserved protein;Phage or Prophage Related; <NULL_VALUE> 2772154 yfjU 945062 yfjU Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 2772002 R 511145 CDS b2641 947563 complement(join(2772167..2773066,2773066..2773182)) 1 NC_000913.3 pseudogene, CP4-57 prophage;Phage or Prophage Related; putative pump protein; <NULL_VALUE> 2773182 yfjV 947563 yfjV Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 2772167 R 511145 CDS NP_417129.1 16130557 947128 2773318..2775021 1 NC_000913.3 CP4-57 prophage; putative inner membrane protein 2775021 yfjW 947128 yfjW Escherichia coli str. K-12 substr. MG1655 CP4-57 prophage; putative inner membrane protein NP_417129.1 2773318 D 511145 CDS b4644 5625570 join(2775545..2775724,2775724..2775816) 1 NC_000913.3 pseudogene, CP4-57 putative prophage remnant;Phage or Prophage Related; <NULL_VALUE> 2775816 ypjI 5625570 ypjI Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 2775545 D 511145 CDS NP_417130.1 16130558 947126 2775919..2776377 1 NC_000913.3 CP4-57 prophage; putative antirestriction protein 2776377 yfjX 947126 yfjX Escherichia coli str. K-12 substr. MG1655 CP4-57 prophage; putative antirestriction protein NP_417130.1 2775919 D 511145 CDS NP_417131.1 16130559 947125 2776386..2776868 1 NC_000913.3 putative DNA repair protein; CP4-57 prophage; putative DNA repair protein 2776868 yfjY 947125 yfjY Escherichia coli str. K-12 substr. MG1655 CP4-57 prophage; putative DNA repair protein NP_417131.1 2776386 D 511145 CDS YP_588466.1 94541123 1450287 2776877..2777077 1 NC_000913.3 uncharacterized protein 2777077 ypjJ 1450287 ypjJ Escherichia coli str. K-12 substr. MG1655 uncharacterized protein YP_588466.1 2776877 D 511145 CDS NP_417132.1 16130560 947123 2777115..2777432 1 NC_000913.3 CP4-57 prophage; antitoxin of the YpjF-YfjZ toxin-antitoxin system 2777432 yfjZ 947123 yfjZ Escherichia coli str. K-12 substr. MG1655 CP4-57 prophage; antitoxin of the YpjF-YfjZ toxin-antitoxin system NP_417132.1 2777115 D 511145 CDS NP_417133.1 16130561 947131 2777453..2777782 1 NC_000913.3 CP4-57 prophage; toxin of the YpjF-YfjZ toxin-antitoxin system 2777782 ypjF 947131 ypjF Escherichia coli str. K-12 substr. MG1655 CP4-57 prophage; toxin of the YpjF-YfjZ toxin-antitoxin system NP_417133.1 2777453 D 511145 CDS NP_417134.2 90111474 948630 complement(2778146..2782726) 1 NC_000913.3 putative ATP-binding component of a transport system; adhesin-like autotransporter 2782726 ypjA 948630 ypjA Escherichia coli str. K-12 substr. MG1655 adhesin-like autotransporter NP_417134.2 2778146 R 511145 CDS b2648 947250 complement(2783065..2783304) 1 NC_000913.3 pseudogene, invertase resolvase family; <NULL_VALUE> 2783304 pinH 947250 pinH Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 2783065 R 511145 CDS b2650 947640 complement(2783638..2785011) 1 NC_000913.3 pseudogene; <NULL_VALUE> 2785011 ypjC 947640 ypjC Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 2783638 R 511145 CDS b4462 2847762 2786397..2788649 1 NC_000913.3 uncharacterized protein; putative enzyme; <NULL_VALUE> 2788649 ygaQ 2847762 ygaQ Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 2786397 D 511145 CDS NP_417145.4 90111476 948076 2788985..2789962 1 NC_000913.3 carbon starvation protein 2789962 csiD 948076 csiD Escherichia coli str. K-12 substr. MG1655 carbon starvation protein NP_417145.4 2788985 D 511145 CDS NP_417146.2 90111477 948069 2789982..2791250 1 NC_000913.3 L-2-hydroxyglutarate oxidase 2791250 lhgO 948069 lhgO Escherichia coli str. K-12 substr. MG1655 L-2-hydroxyglutarate oxidase NP_417146.2 2789982 D 511145 CDS NP_417147.1 16130575 948060 2791273..2792721 1 NC_000913.3 succinate-semialdehyde dehydrogenase, NADP-dependent activity; succinate-semialdehyde dehydrogenase I, NADP-dependent 2792721 gabD 948060 gabD Escherichia coli str. K-12 substr. MG1655 succinate-semialdehyde dehydrogenase I, NADP-dependent NP_417147.1 2791273 D 511145 CDS NP_417148.1 16130576 948067 2792735..2794015 1 NC_000913.3 4-aminobutyrate aminotransferase activity; 4-aminobutyrate aminotransferase, PLP-dependent 2794015 gabT 948067 gabT Escherichia coli str. K-12 substr. MG1655 4-aminobutyrate aminotransferase, PLP-dependent NP_417148.1 2792735 D 511145 CDS NP_417149.1 16130577 948049 2794253..2795653 1 NC_000913.3 transport permease protein of gamma-aminobutyrate; gamma-aminobutyrate transporter 2795653 gabP 948049 gabP Escherichia coli str. K-12 substr. MG1655 gamma-aminobutyrate transporter NP_417149.1 2794253 D 511145 CDS NP_417150.4 90111478 948055 2795674..2796336 1 NC_000913.3 putative transcriptional regulator; transcriptional repressor of csiD 2796336 csiR 948055 csiR Escherichia coli str. K-12 substr. MG1655 transcriptional repressor of csiD NP_417150.4 2795674 D 511145 CDS NP_417151.1 16130579 947144 complement(2796337..2796786) 1 NC_000913.3 uncharacterized protein 2796786 ygaU 947144 ygaU Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_417151.1 2796337 R 511145 CDS NP_417152.1 16130580 947138 complement(2796870..2797028) 1 NC_000913.3 cyaR sRNA-regulated protein 2797028 yqaE 947138 yqaE Escherichia coli str. K-12 substr. MG1655 cyaR sRNA-regulated protein NP_417152.1 2796870 R 511145 CDS NP_417153.1 16130581 947136 2797211..2797510 1 NC_000913.3 tributyltin-inducible repressor of ygaVP 2797510 ygaV 947136 ygaV Escherichia coli str. K-12 substr. MG1655 tributyltin-inducible repressor of ygaVP NP_417153.1 2797211 D 511145 CDS NP_417154.1 16130582 947135 2797520..2798044 1 NC_000913.3 DUF2892 family inner membrane rhodanese 2798044 ygaP 947135 ygaP Escherichia coli str. K-12 substr. MG1655 DUF2892 family inner membrane rhodanese NP_417154.1 2797520 D 511145 CDS NP_417155.1 16130583 947130 complement(2798091..2798495) 1 NC_000913.3 DNA-binding protein; H-NS-like protein; chaperone activity; RNA splicing?; DNA binding protein, nucleoid-associated 2798495 stpA 947130 stpA Escherichia coli str. K-12 substr. MG1655 DNA binding protein, nucleoid-associated NP_417155.1 2798091 R 511145 CDS NP_417156.1 16130584 947147 2799164..2799613 1 NC_000913.3 alanine exporter, alanine-inducible, stress-responsive 2799613 alaE 947147 alaE Escherichia coli str. K-12 substr. MG1655 alanine exporter, alanine-inducible, stress-responsive NP_417156.1 2799164 D 511145 CDS NP_417157.1 16130585 947156 complement(2799650..2799994) 1 NC_000913.3 uncharacterized protein 2799994 ygaC 947156 ygaC Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_417157.1 2799650 R 511145 CDS NP_417158.4 459201372 947157 2800146..2800475 1 NC_000913.3 DUF883 family protein, putative membrane-anchored ribosome-binding protein 2800475 ygaM 947157 ygaM Escherichia coli str. K-12 substr. MG1655 DUF883 family protein, putative membrane-anchored ribosome-binding protein NP_417158.4 2800146 D 511145 CDS NP_417159.1 16130587 947161 2800723..2800968 1 NC_000913.3 glutaredoxin-like protein; hydrogen donor; hydrogen donor for NrdEF electron transport system; glutaredoxin-like protein 2800968 nrdH 947161 nrdH Escherichia coli str. K-12 substr. MG1655 hydrogen donor for NrdEF electron transport system; glutaredoxin-like protein NP_417159.1 2800723 D 511145 CDS NP_417160.1 16130588 947158 2800965..2801375 1 NC_000913.3 NrdEF cluster assembly flavodoxin 2801375 nrdI 947158 nrdI Escherichia coli str. K-12 substr. MG1655 NrdEF cluster assembly flavodoxin NP_417160.1 2800965 D 511145 CDS NP_417161.1 16130589 947155 2801348..2803492 1 NC_000913.3 ribonucleoside-diphosphate reductase 2, alpha subunit 2803492 nrdE 947155 nrdE Escherichia coli str. K-12 substr. MG1655 ribonucleoside-diphosphate reductase 2, alpha subunit NP_417161.1 2801348 D 511145 CDS NP_417162.1 16130590 947149 2803502..2804461 1 NC_000913.3 ribonucleoside-diphosphate reductase 2, beta chain, frag; ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like protein 2804461 nrdF 947149 nrdF Escherichia coli str. K-12 substr. MG1655 ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like protein NP_417162.1 2803502 D 511145 CDS NP_417163.1 16130591 947148 2804815..2806017 1 NC_000913.3 ATP-binding component of transport system for glycine, betaine and proline; glycine betaine transporter subunit 2806017 proV 947148 proV Escherichia coli str. K-12 substr. MG1655 glycine betaine transporter subunit NP_417163.1 2804815 D 511145 CDS NP_417164.1 16130592 947145 2806010..2807074 1 NC_000913.3 high-affinity transport system for glycine betaine and proline; membrane component of ABC superfamily; glycine betaine transporter subunit 2807074 proW 947145 proW Escherichia coli str. K-12 substr. MG1655 glycine betaine transporter subunit NP_417164.1 2806010 D 511145 CDS NP_417165.1 16130593 947165 2807132..2808124 1 NC_000913.3 high-affinity transport system for glycine betaine and proline; periplasmic-binding component of ABC superfamily; glycine betaine transporter subunit 2808124 proX 947165 proX Escherichia coli str. K-12 substr. MG1655 glycine betaine transporter subunit NP_417165.1 2807132 D 511145 CDS b2681 2847696 2808316..2809493 1 NC_000913.3 pseudogene, major facilitator transporter superfamily;putative transport; Not classified; putative transport protein; <NULL_VALUE> 2809493 ygaY 2847696 ygaY Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 2808316 D 511145 CDS NP_417167.1 16130594 945093 2809617..2810354 1 NC_000913.3 putative L-valine exporter, norvaline resistance protein 2810354 ygaZ 945093 ygaZ Escherichia coli str. K-12 substr. MG1655 putative L-valine exporter, norvaline resistance protein NP_417167.1 2809617 D 511145 CDS NP_417168.1 16130595 945111 2810344..2810679 1 NC_000913.3 putative L-valine exporter, norvaline resistance protein 2810679 ygaH 945111 ygaH Escherichia coli str. K-12 substr. MG1655 putative L-valine exporter, norvaline resistance protein NP_417168.1 2810344 D 511145 CDS NP_417169.1 16130596 945282 2810770..2811300 1 NC_000913.3 regulator of plasmid mcrB operon (microcin B17 synthesis); transcriptional repressor of microcin B17 synthesis and multidrug efflux 2811300 mprA 945282 mprA Escherichia coli str. K-12 substr. MG1655 transcriptional repressor of microcin B17 synthesis and multidrug efflux NP_417169.1 2810770 D 511145 CDS NP_417170.1 16130597 947166 2811427..2812599 1 NC_000913.3 multidrug resistance secretion protein; multidrug efflux system 2812599 emrA 947166 emrA Escherichia coli str. K-12 substr. MG1655 multidrug efflux system NP_417170.1 2811427 D 511145 CDS NP_417171.1 16130598 947167 2812616..2814154 1 NC_000913.3 multidrug resistance; probably membrane translocase; multidrug efflux system protein 2814154 emrB 947167 emrB Escherichia coli str. K-12 substr. MG1655 multidrug efflux system protein NP_417171.1 2812616 D 511145 CDS NP_417172.1 16130599 947168 complement(2814218..2814733) 1 NC_000913.3 S-ribosylhomocysteine lyase 2814733 luxS 947168 luxS Escherichia coli str. K-12 substr. MG1655 S-ribosylhomocysteine lyase NP_417172.1 2814218 R 511145 CDS NP_417173.1 16130600 944881 complement(2814883..2816439) 1 NC_000913.3 glutamate-cysteine ligase 2816439 gshA 944881 gshA Escherichia coli str. K-12 substr. MG1655 glutamate-cysteine ligase NP_417173.1 2814883 R 511145 CDS NP_417174.1 16130601 945419 complement(2816512..2816940) 1 NC_000913.3 COG1238 family inner membrane protein 2816940 yqaA 945419 yqaA Escherichia coli str. K-12 substr. MG1655 COG1238 family inner membrane protein NP_417174.1 2816512 R 511145 CDS NP_417175.1 16130602 945776 complement(2816937..2817503) 1 NC_000913.3 putative phosphatase; fructose-1-P and 6-phosphogluconate phosphatase 2817503 yqaB 945776 yqaB Escherichia coli str. K-12 substr. MG1655 fructose-1-P and 6-phosphogluconate phosphatase NP_417175.1 2816937 R 511145 CDS NP_417176.1 16130603 947176 complement(2818961..2819146) 1 NC_000913.3 carbon storage regulator; controls glycogen synthesis, gluconeogenesis, cell size and surface properties; pleiotropic regulatory protein for carbon source metabolism 2819146 csrA 947176 csrA Escherichia coli str. K-12 substr. MG1655 pleiotropic regulatory protein for carbon source metabolism NP_417176.1 2818961 R 511145 CDS NP_417177.1 16130604 947175 complement(2819381..2822011) 1 NC_000913.3 alanyl-tRNA synthetase 2822011 alaS 947175 alaS Escherichia coli str. K-12 substr. MG1655 alanyl-tRNA synthetase NP_417177.1 2819381 R 511145 CDS NP_417178.1 16130605 947172 complement(2822139..2822639) 1 NC_000913.3 regulator, OraA protein; regulatory protein for RecA 2822639 recX 947172 recX Escherichia coli str. K-12 substr. MG1655 regulatory protein for RecA NP_417178.1 2822139 R 511145 CDS NP_417179.1 16130606 947170 complement(2822708..2823769) 1 NC_000913.3 DNA strand exchange and renaturation, DNA-dependent ATPase, DNA- and ATP-dependent coprotease; DNA recombination and repair protein; ssDNA-dependent ATPase; synaptase; ssDNA and dsDNA binding protein forming filaments; ATP-dependent homologous DNA strand exchanger; recombinase A; LexA autocleavage cofactor 2823769 recA 947170 recA Escherichia coli str. K-12 substr. MG1655 DNA recombination and repair protein; ssDNA-dependent ATPase; synaptase; ssDNA and dsDNA binding protein forming filaments; ATP-dependent homologous DNA strand exchanger; recombinase A; LexA autocleavage cofactor NP_417179.1 2822708 R 511145 CDS NP_417180.1 16130607 947169 complement(2823849..2824346) 1 NC_000913.3 nicotinamide-nucleotide amidohydrolase; NMN amidohydrolase 2824346 pncC 947169 pncC Escherichia coli str. K-12 substr. MG1655 nicotinamide-nucleotide amidohydrolase; NMN amidohydrolase NP_417180.1 2823849 R 511145 CDS NP_417181.1 16130608 947184 complement(2824491..2825576) 1 NC_000913.3 membrane-bound lytic murein transglycosylase B 2825576 mltB 947184 mltB Escherichia coli str. K-12 substr. MG1655 membrane-bound lytic murein transglycosylase B NP_417181.1 2824491 R 511145 CDS YP_026180.1 49176260 947575 2825832..2826395 1 NC_000913.3 PTS system, glucitol/sorbitol-specific IIC component, one of two; glucitol/sorbitol-specific enzyme IIC component of PTS 2826395 srlA 947575 srlA Escherichia coli str. K-12 substr. MG1655 glucitol/sorbitol-specific enzyme IIC component of PTS YP_026180.1 2825832 D 511145 CDS YP_026181.1 49176261 948933 2826392..2827351 1 NC_000913.3 PTS system, glucitol/sorbitol-specific IIB component and second of two IIC components; glucitol/sorbitol-specific enzyme IIB component of PTS 2827351 srlE 948933 srlE Escherichia coli str. K-12 substr. MG1655 glucitol/sorbitol-specific enzyme IIB component of PTS YP_026181.1 2826392 D 511145 CDS NP_417184.1 16130611 948971 2827362..2827733 1 NC_000913.3 PTS system, glucitol/sorbitol-specific enzyme IIA component; glucitol/sorbitol-specific enzyme IIA component of PTS 2827733 srlB 948971 srlB Escherichia coli str. K-12 substr. MG1655 glucitol/sorbitol-specific enzyme IIA component of PTS NP_417184.1 2827362 D 511145 CDS NP_417185.1 16130612 948937 2827737..2828516 1 NC_000913.3 glucitol (sorbitol)-6-phosphate dehydrogenase; sorbitol-6-phosphate dehydrogenase 2828516 srlD 948937 srlD Escherichia coli str. K-12 substr. MG1655 sorbitol-6-phosphate dehydrogenase NP_417185.1 2827737 D 511145 CDS NP_417186.1 16130613 948938 2828621..2828980 1 NC_000913.3 glucitol operon activator; sorbitol-responsive srl operon transcriptional activator 2828980 srlM 948938 srlM Escherichia coli str. K-12 substr. MG1655 sorbitol-responsive srl operon transcriptional activator NP_417186.1 2828621 D 511145 CDS NP_417187.1 16130614 948942 2829047..2829820 1 NC_000913.3 regulator for gut (srl), glucitol operon; sorbitol-inducible srl operon transcriptional repressor 2829820 srlR 948942 srlR Escherichia coli str. K-12 substr. MG1655 sorbitol-inducible srl operon transcriptional repressor NP_417187.1 2829047 D 511145 CDS NP_417188.4 90111480 947587 2829813..2830778 1 NC_000913.3 D-arabinose 5-phosphate isomerase 2830778 srlQ 947587 srlQ Escherichia coli str. K-12 substr. MG1655 D-arabinose 5-phosphate isomerase NP_417188.4 2829813 D 511145 CDS NP_417189.2 90111481 947186 complement(2830775..2832289) 1 NC_000913.3 putative 2-component transcriptional regulator; anaerobic nitric oxide reductase DNA-binding transcriptional activator 2832289 norR 947186 norR Escherichia coli str. K-12 substr. MG1655 anaerobic nitric oxide reductase DNA-binding transcriptional activator NP_417189.2 2830775 R 511145 CDS NP_417190.1 16130617 948979 2832476..2833915 1 NC_000913.3 putative flavodoxin; anaerobic nitric oxide reductase flavorubredoxin 2833915 norV 948979 norV Escherichia coli str. K-12 substr. MG1655 anaerobic nitric oxide reductase flavorubredoxin NP_417190.1 2832476 D 511145 CDS NP_417191.1 16130618 947088 2833912..2835045 1 NC_000913.3 putative oxidoreductase; NADH:flavorubredoxin oxidoreductase 2835045 norW 947088 norW Escherichia coli str. K-12 substr. MG1655 NADH:flavorubredoxin oxidoreductase NP_417191.1 2833912 D 511145 CDS NP_417192.1 16130619 944963 complement(2835173..2837425) 1 NC_000913.3 transcriptional regulatory protein; carbamoyl phosphate phosphatase and maturation protein for [NiFe] hydrogenases 2837425 hypF 944963 hypF Escherichia coli str. K-12 substr. MG1655 carbamoyl phosphate phosphatase and maturation protein for [NiFe] hydrogenases NP_417192.1 2835173 R 511145 CDS NP_417193.1 16130620 947190 complement(2837578..2838105) 1 NC_000913.3 involved in electron transport from formate to hydrogen, Fe-S centers; formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit 2838105 hydN 947190 hydN Escherichia coli str. K-12 substr. MG1655 formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit NP_417193.1 2837578 R 511145 CDS NP_417194.2 345452722 947305 complement(2838254..2839264) 1 NC_000913.3 ascBF operon repressor; asc operon transcriptional repressor; prpBC operon repressor 2839264 ascG 947305 ascG Escherichia coli str. K-12 substr. MG1655 asc operon transcriptional repressor; prpBC operon repressor NP_417194.2 2838254 R 511145 CDS YP_026182.1 49176263 947154 2839524..2840981 1 NC_000913.3 PTS system enzyme II ABC (asc), cryptic, transports specific beta-glucosides; fused cellobiose/arbutin/salicin-specific PTS enzymes: IIB component/IC component 2840981 ascF 947154 ascF Escherichia coli str. K-12 substr. MG1655 fused cellobiose/arbutin/salicin-specific PTS enzymes: IIB component/IC component YP_026182.1 2839524 D 511145 CDS NP_417196.1 16130623 947460 2840990..2842414 1 NC_000913.3 6-phospho-beta-glucosidase; cryptic; cryptic 6-phospho-beta-glucosidase 2842414 ascB 947460 ascB Escherichia coli str. K-12 substr. MG1655 cryptic 6-phospho-beta-glucosidase NP_417196.1 2840990 D 511145 CDS NP_417197.1 16130624 947428 complement(2842573..2843043) 1 NC_000913.3 protease involved in processing C-terminal end of the large subunit of hydrogenase 3; protease involved in processing C-terminal end of HycE 2843043 hycI 947428 hycI Escherichia coli str. K-12 substr. MG1655 protease involved in processing C-terminal end of HycE NP_417197.1 2842573 R 511145 CDS NP_417198.1 16130625 947438 complement(2843036..2843446) 1 NC_000913.3 processing of large subunit (HycE) of hydrogenase 3 (part of the FHL complex); hydrogenase 3 maturation protein 2843446 hycH 947438 hycH Escherichia coli str. K-12 substr. MG1655 hydrogenase 3 maturation protein NP_417198.1 2843036 R 511145 CDS NP_417199.1 16130626 947191 complement(2843443..2844210) 1 NC_000913.3 hydrogenase activity; hydrogenase 3 and formate hydrogenase complex, HycG subunit 2844210 hycG 947191 hycG Escherichia coli str. K-12 substr. MG1655 hydrogenase 3 and formate hydrogenase complex, HycG subunit NP_417199.1 2843443 R 511145 CDS NP_417200.1 16130627 947048 complement(2844210..2844752) 1 NC_000913.3 probable iron-sulfur protein of hydrogenase 3 (part of FHL complex); formate hydrogenlyase complex iron-sulfur protein 2844752 hycF 947048 hycF Escherichia coli str. K-12 substr. MG1655 formate hydrogenlyase complex iron-sulfur protein NP_417200.1 2844210 R 511145 CDS NP_417201.1 16130628 947396 complement(2844762..2846471) 1 NC_000913.3 large subunit of hydrogenase 3 (part of FHL complex); hydrogenase 3, large subunit 2846471 hycE 947396 hycE Escherichia coli str. K-12 substr. MG1655 hydrogenase 3, large subunit NP_417201.1 2844762 R 511145 CDS NP_417202.1 16130629 948994 complement(2846489..2847412) 1 NC_000913.3 membrane-spanning protein of hydrogenase 3 (part of FHL complex); hydrogenase 3, membrane subunit 2847412 hycD 948994 hycD Escherichia coli str. K-12 substr. MG1655 hydrogenase 3, membrane subunit NP_417202.1 2846489 R 511145 CDS NP_417203.1 16130630 945327 complement(2847415..2849241) 1 NC_000913.3 membrane-spanning protein of hydrogenase 3 (part of FHL complex); hydrogenase 3, membrane subunit 2849241 hycC 945327 hycC Escherichia coli str. K-12 substr. MG1655 hydrogenase 3, membrane subunit NP_417203.1 2847415 R 511145 CDS NP_417204.1 16130631 948002 complement(2849238..2849849) 1 NC_000913.3 probable small subunit of hydrogenase-3, iron-sulfur protein (part of formate hydrogenlyase (FHL) complex); hydrogenase 3, Fe-S subunit 2849849 hycB 948002 hycB Escherichia coli str. K-12 substr. MG1655 hydrogenase 3, Fe-S subunit NP_417204.1 2849238 R 511145 CDS NP_417205.1 16130632 947193 complement(2849974..2850435) 1 NC_000913.3 transcriptional repression of hyc and hyp operons; regulator of the transcriptional regulator FhlA 2850435 hycA 947193 hycA Escherichia coli str. K-12 substr. MG1655 regulator of the transcriptional regulator FhlA NP_417205.1 2849974 R 511145 CDS NP_417206.1 16130633 947195 2850647..2850997 1 NC_000913.3 pleiotrophic effects on 3 hydrogenase isozymes; protein involved in nickel insertion into hydrogenases 3 2850997 hypA 947195 hypA Escherichia coli str. K-12 substr. MG1655 protein involved in nickel insertion into hydrogenases 3 NP_417206.1 2850647 D 511145 CDS NP_417207.1 16130634 947194 2851001..2851873 1 NC_000913.3 guanine-nucleotide binding protein, functions as nickel donor for large subunit of hydrogenase 3; GTP hydrolase involved in nickel liganding into hydrogenases 2851873 hypB 947194 hypB Escherichia coli str. K-12 substr. MG1655 GTP hydrolase involved in nickel liganding into hydrogenases NP_417207.1 2851001 D 511145 CDS NP_417208.1 16130635 947192 2851864..2852136 1 NC_000913.3 pleiotrophic effects on 3 hydrogenase isozymes; hydrogenase maturation protein 2852136 hypC 947192 hypC Escherichia coli str. K-12 substr. MG1655 hydrogenase maturation protein NP_417208.1 2851864 D 511145 CDS NP_417209.1 16130636 947189 2852136..2853257 1 NC_000913.3 pleiotrophic effects on 3 hydrogenase isozymes; hydrogenase maturation protein 2853257 hypD 947189 hypD Escherichia coli str. K-12 substr. MG1655 hydrogenase maturation protein NP_417209.1 2852136 D 511145 CDS NP_417210.2 226524740 947182 2853254..2854264 1 NC_000913.3 plays structural role in maturation of all 3 hydrogenases; carbamoyl dehydratase, hydrogenases 1,2,3 maturation protein 2854264 hypE 947182 hypE Escherichia coli str. K-12 substr. MG1655 carbamoyl dehydratase, hydrogenases 1,2,3 maturation protein NP_417210.2 2853254 D 511145 CDS NP_417211.1 16130638 947181 2854338..2856416 1 NC_000913.3 formate hydrogen-lyase transcriptional activator for fdhF, hyc and hyp operons; formate hydrogenlyase transcriptional activator 2856416 fhlA 947181 fhlA Escherichia coli str. K-12 substr. MG1655 formate hydrogenlyase transcriptional activator NP_417211.1 2854338 D 511145 CDS NP_417212.1 16130639 947187 complement(2856453..2856806) 1 NC_000913.3 uncharacterized protein 2856806 ygbA 947187 ygbA Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_417212.1 2856453 R 511145 CDS NP_417213.1 16130640 947206 2857093..2859654 1 NC_000913.3 methyl-directed mismatch repair; methyl-directed mismatch repair protein 2859654 mutS 947206 mutS Escherichia coli str. K-12 substr. MG1655 methyl-directed mismatch repair protein NP_417213.1 2857093 D 511145 CDS NP_417214.1 16130641 947196 2859760..2860416 1 NC_000913.3 protein phosphatase 2; serine/threonine-specific protein phosphatase 2 2860416 pphB 947196 pphB Escherichia coli str. K-12 substr. MG1655 serine/threonine-specific protein phosphatase 2 NP_417214.1 2859760 D 511145 CDS NP_417215.2 226524741 947204 complement(2860467..2861234) 1 NC_000913.3 putative DEOR-type transcriptional regulator; DeoR family putative transcriptional regulator 2861234 ygbI 947204 ygbI Escherichia coli str. K-12 substr. MG1655 DeoR family putative transcriptional regulator NP_417215.2 2860467 R 511145 CDS NP_417216.1 16130643 947200 2861430..2862338 1 NC_000913.3 putative dehydrogenase 2862338 ygbJ 947200 ygbJ Escherichia coli str. K-12 substr. MG1655 putative dehydrogenase NP_417216.1 2861430 D 511145 CDS NP_417217.1 16130644 947199 2862335..2863501 1 NC_000913.3 FliA-regulated DUF1537 family protein 2863501 ygbK 947199 ygbK Escherichia coli str. K-12 substr. MG1655 FliA-regulated DUF1537 family protein NP_417217.1 2862335 D 511145 CDS NP_417218.1 16130645 947197 2863593..2864231 1 NC_000913.3 putative epimerase/aldolase; putative class II aldolase 2864231 ygbL 947197 ygbL Escherichia coli str. K-12 substr. MG1655 putative class II aldolase NP_417218.1 2863593 D 511145 CDS NP_417219.1 16130646 947207 2864236..2865012 1 NC_000913.3 putative hydroxypyruvate isomerase 2865012 ygbM 947207 ygbM Escherichia coli str. K-12 substr. MG1655 putative hydroxypyruvate isomerase NP_417219.1 2864236 D 511145 CDS NP_417220.1 16130647 947208 2865101..2866465 1 NC_000913.3 putative transport protein; putative transporter 2866465 ygbN 947208 ygbN Escherichia coli str. K-12 substr. MG1655 putative transporter NP_417220.1 2865101 D 511145 CDS NP_417221.1 16130648 947210 complement(2866559..2867551) 1 NC_000913.3 RNA polymerase, sigma S (sigma38) factor; synthesis of many growth phase related proteins; RNA polymerase, sigma S (sigma 38) factor 2867551 rpoS 947210 rpoS Escherichia coli str. K-12 substr. MG1655 RNA polymerase, sigma S (sigma 38) factor NP_417221.1 2866559 R 511145 CDS NP_417222.1 16130649 947011 complement(2867614..2868753) 1 NC_000913.3 lipoprotein; activator of AmiC murein hydrolase activity, lipoprotein 2868753 nlpD 947011 nlpD Escherichia coli str. K-12 substr. MG1655 activator of AmiC murein hydrolase activity, lipoprotein NP_417222.1 2867614 R 511145 CDS NP_417223.1 16130650 944923 complement(2868893..2869519) 1 NC_000913.3 L-isoaspartate protein carboxylmethyltransferase type II 2869519 pcm 944923 pcm Escherichia coli str. K-12 substr. MG1655 L-isoaspartate protein carboxylmethyltransferase type II NP_417223.1 2868893 R 511145 CDS NP_417224.1 16130651 947211 complement(2869513..2870274) 1 NC_000913.3 survival protein; broad specificity 5'(3')-nucleotidase and polyphosphatase 2870274 umpG 947211 umpG Escherichia coli str. K-12 substr. MG1655 broad specificity 5'(3')-nucleotidase and polyphosphatase NP_417224.1 2869513 R 511145 CDS NP_417225.1 16130652 947214 complement(2870255..2871304) 1 NC_000913.3 putative hydrogenase subunit; tRNA(Glu) pseudouridine(13) synthase 2871304 truD 947214 truD Escherichia coli str. K-12 substr. MG1655 tRNA(Glu) pseudouridine(13) synthase NP_417225.1 2870255 R 511145 CDS NP_417226.1 16130653 945057 complement(2871301..2871780) 1 NC_000913.3 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2871780 ispF 945057 ispF Escherichia coli str. K-12 substr. MG1655 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase NP_417226.1 2871301 R 511145 CDS NP_417227.1 16130654 948269 complement(2871780..2872490) 1 NC_000913.3 4-diphosphocytidyl-2C-methyl-D-erythritol synthase 2872490 ispD 948269 ispD Escherichia coli str. K-12 substr. MG1655 4-diphosphocytidyl-2C-methyl-D-erythritol synthase NP_417227.1 2871780 R 511145 CDS NP_417228.1 16130655 946033 complement(2872509..2872820) 1 NC_000913.3 cell division protein 2872820 ftsB 946033 ftsB Escherichia coli str. K-12 substr. MG1655 cell division protein NP_417228.1 2872509 R 511145 CDS NP_417229.1 16130656 947268 complement(2873014..2873337) 1 NC_000913.3 putative cytochrome oxidase subunit; DUF3561 family inner membrane protein 2873337 ygbE 947268 ygbE Escherichia coli str. K-12 substr. MG1655 DUF3561 family inner membrane protein NP_417229.1 2873014 R 511145 CDS NP_417230.1 16130657 947221 complement(2873387..2873992) 1 NC_000913.3 adenosine 5'-phosphosulfate kinase 2873992 cysC 947221 cysC Escherichia coli str. K-12 substr. MG1655 adenosine 5'-phosphosulfate kinase NP_417230.1 2873387 R 511145 CDS NP_417231.1 16130658 947219 complement(2873992..2875419) 1 NC_000913.3 ATP-sulfurylase (ATP:sulfate adenylyltransferase), subunit 1, probably a GTPase; sulfate adenylyltransferase, subunit 1 2875419 cysN 947219 cysN Escherichia coli str. K-12 substr. MG1655 sulfate adenylyltransferase, subunit 1 NP_417231.1 2873992 R 511145 CDS NP_417232.1 16130659 947217 complement(2875421..2876329) 1 NC_000913.3 ATP:sulfurylase (ATP:sulfate adenylyltransferase), subunit 2; sulfate adenylyltransferase, subunit 2 2876329 cysD 947217 cysD Escherichia coli str. K-12 substr. MG1655 sulfate adenylyltransferase, subunit 2 NP_417232.1 2875421 R 511145 CDS NP_417233.1 16130660 947215 2876581..2877618 1 NC_000913.3 aminopeptidase in alkaline phosphatase isozyme conversion 2877618 iap 947215 iap Escherichia coli str. K-12 substr. MG1655 aminopeptidase in alkaline phosphatase isozyme conversion NP_417233.1 2876581 D 511145 CDS NP_417234.2 90111482 947213 complement(2878569..2878853) 1 NC_000913.3 CRISPR adaptation ssRNA endonuclease 2878853 ygbF 947213 ygbF Escherichia coli str. K-12 substr. MG1655 CRISPR adaptation ssRNA endonuclease NP_417234.2 2878569 R 511145 CDS NP_417235.1 16130662 947228 complement(2878855..2879772) 1 NC_000913.3 multifunctional endonuclease Cas1, CRISPR adaptation protein; DNA repair enzyme 2879772 ygbT 947228 ygbT Escherichia coli str. K-12 substr. MG1655 multifunctional endonuclease Cas1, CRISPR adaptation protein; DNA repair enzyme NP_417235.1 2878855 R 511145 CDS NP_417236.1 16130663 947226 complement(2879788..2880387) 1 NC_000913.3 CRISPR RNA precursor cleavage enzyme; CRISP RNA (crRNA) containing Cascade antiviral complex protein 2880387 casE 947226 casE Escherichia coli str. K-12 substr. MG1655 CRISPR RNA precursor cleavage enzyme; CRISP RNA (crRNA) containing Cascade antiviral complex protein NP_417236.1 2879788 R 511145 CDS NP_417237.2 90111483 947225 complement(2880374..2881048) 1 NC_000913.3 CRISP RNA (crRNA) containing Cascade antiviral complex protein 2881048 casD 947225 casD Escherichia coli str. K-12 substr. MG1655 CRISP RNA (crRNA) containing Cascade antiviral complex protein NP_417237.2 2880374 R 511145 CDS NP_417238.1 16130665 947224 complement(2881051..2882142) 1 NC_000913.3 CRISP RNA (crRNA) containing Cascade antiviral complex protein 2882142 casC 947224 casC Escherichia coli str. K-12 substr. MG1655 CRISP RNA (crRNA) containing Cascade antiviral complex protein NP_417238.1 2881051 R 511145 CDS NP_417239.1 16130666 947223 complement(2882155..2882637) 1 NC_000913.3 CRISP RNA (crRNA) containing Cascade antiviral complex protein 2882637 casB 947223 casB Escherichia coli str. K-12 substr. MG1655 CRISP RNA (crRNA) containing Cascade antiviral complex protein NP_417239.1 2882155 R 511145 CDS NP_417240.1 16130667 947222 complement(2882630..2884138) 1 NC_000913.3 CRISP RNA (crRNA) containing Cascade antiviral complex protein 2884138 casA 947222 casA Escherichia coli str. K-12 substr. MG1655 CRISP RNA (crRNA) containing Cascade antiviral complex protein NP_417240.1 2882630 R 511145 CDS NP_417241.1 16130668 947229 complement(2884553..2887219) 1 NC_000913.3 R-loop helicase-annealase Cas3 needed for Cascade anti-viral activity 2887219 ygcB 947229 ygcB Escherichia coli str. K-12 substr. MG1655 R-loop helicase-annealase Cas3 needed for Cascade anti-viral activity NP_417241.1 2884553 R 511145 CDS NP_417242.1 16130669 947230 complement(2887578..2888312) 1 NC_000913.3 phosphoadenosine phosphosulfate reductase; PAPS reductase, thioredoxin dependent 2888312 cysH 947230 cysH Escherichia coli str. K-12 substr. MG1655 phosphoadenosine phosphosulfate reductase; PAPS reductase, thioredoxin dependent NP_417242.1 2887578 R 511145 CDS NP_417243.1 16130670 947231 complement(2888387..2890099) 1 NC_000913.3 sulfite reductase, alpha subunit; sulfite reductase, beta subunit, NAD(P)-binding, heme-binding 2890099 cysI 947231 cysI Escherichia coli str. K-12 substr. MG1655 sulfite reductase, beta subunit, NAD(P)-binding, heme-binding NP_417243.1 2888387 R 511145 CDS NP_417244.1 16130671 947239 complement(2890099..2891898) 1 NC_000913.3 sulfite reductase (NADPH), flavoprotein beta subunit; sulfite reductase, alpha subunit, flavoprotein 2891898 cysJ 947239 cysJ Escherichia coli str. K-12 substr. MG1655 sulfite reductase, alpha subunit, flavoprotein NP_417244.1 2890099 R 511145 CDS NP_417245.1 16130672 945123 2892214..2892579 1 NC_000913.3 putative 6-pyruvoyl tetrahydrobiopterin synthase; 6-pyruvoyl tetrahydrobiopterin synthase (PTPS) 2892579 queD 945123 queD Escherichia coli str. K-12 substr. MG1655 6-pyruvoyl tetrahydrobiopterin synthase (PTPS) NP_417245.1 2892214 D 511145 CDS NP_417246.4 90111484 946114 2892657..2893928 1 NC_000913.3 putative oxidoreductase 2893928 ygcN 946114 ygcN Escherichia coli str. K-12 substr. MG1655 putative oxidoreductase NP_417246.4 2892657 D 511145 CDS NP_417247.2 90111485 945120 2893919..2894179 1 NC_000913.3 putative 4Fe-4S cluster-containing protein 2894179 ygcO 945120 ygcO Escherichia coli str. K-12 substr. MG1655 putative 4Fe-4S cluster-containing protein NP_417247.2 2893919 D 511145 CDS NP_417248.1 16130675 947536 2894196..2894771 1 NC_000913.3 putative anti-terminator regulatory protein; putative antiterminator regulatory protein 2894771 ygcP 947536 ygcP Escherichia coli str. K-12 substr. MG1655 putative antiterminator regulatory protein NP_417248.1 2894196 D 511145 CDS NP_417249.4 90111486 946413 complement(2894919..2895779) 1 NC_000913.3 putative flavoprotein 2895779 ygcQ 946413 ygcQ Escherichia coli str. K-12 substr. MG1655 putative flavoprotein NP_417249.4 2894919 R 511145 CDS NP_417250.4 90111487 947240 complement(2895776..2896555) 1 NC_000913.3 putative transport protein; putative flavoprotein 2896555 ygcR 947240 ygcR Escherichia coli str. K-12 substr. MG1655 putative flavoprotein NP_417250.4 2895776 R 511145 CDS NP_417251.2 90111488 947238 complement(2896533..2897870) 1 NC_000913.3 putative transport protein; putative transporter 2897870 ygcS 947238 ygcS Escherichia coli str. K-12 substr. MG1655 putative transporter NP_417251.2 2896533 R 511145 CDS YP_026183.1 49176267 2847709 complement(2897964..2899418) 1 NC_000913.3 putative FAD-containing dehydrogenase 2899418 ygcU 2847709 ygcU Escherichia coli str. K-12 substr. MG1655 putative FAD-containing dehydrogenase YP_026183.1 2897964 R 511145 CDS NP_417254.4 90111489 947232 complement(2899488..2900273) 1 NC_000913.3 putative oxidoreductase; putative dehydrogenase 2900273 ygcW 947232 ygcW Escherichia coli str. K-12 substr. MG1655 putative dehydrogenase NP_417254.4 2899488 R 511145 CDS NP_417255.1 16130682 947248 2900592..2901869 1 NC_000913.3 putative transport protein; MFS transporter family protein 2901869 yqcE 947248 yqcE Escherichia coli str. K-12 substr. MG1655 MFS transporter family protein NP_417255.1 2900592 D 511145 CDS NP_417256.1 16130683 946193 2901896..2903374 1 NC_000913.3 putative kinase 2903374 ygcE 946193 ygcE Escherichia coli str. K-12 substr. MG1655 putative kinase NP_417256.1 2901896 D 511145 CDS NP_417257.1 16130684 947527 complement(2904747..2905418) 1 NC_000913.3 7-carboxy-7-deazaguanine synthase; queosine biosynthesis 2905418 queE 947527 queE Escherichia coli str. K-12 substr. MG1655 7-carboxy-7-deazaguanine synthase; queosine biosynthesis NP_417257.1 2904747 R 511145 CDS YP_002791252.1 226524742 7751618 2905557..2905697 1 NC_000913.3 uncharacterized protein 2905697 yqcG 7751618 yqcG Escherichia coli str. K-12 substr. MG1655 uncharacterized protein YP_002791252.1 2905557 D 511145 CDS NP_417258.4 90111490 945247 2905711..2906583 1 NC_000913.3 uncharacterized protein 2906583 ygcG 945247 ygcG Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_417258.4 2905711 D 511145 CDS NP_417259.1 16130686 945032 complement(2906643..2907941) 1 NC_000913.3 enolase 2907941 eno 945032 eno Escherichia coli str. K-12 substr. MG1655 enolase NP_417259.1 2906643 R 511145 CDS NP_417260.1 16130687 946116 complement(2908029..2909666) 1 NC_000913.3 CTP synthetase 2909666 pyrG 946116 pyrG Escherichia coli str. K-12 substr. MG1655 CTP synthetase NP_417260.1 2908029 R 511145 CDS NP_417261.1 16130688 947254 complement(2909894..2910685) 1 NC_000913.3 nucleoside triphosphate pyrophosphohydrolase 2910685 mazG 947254 mazG Escherichia coli str. K-12 substr. MG1655 nucleoside triphosphate pyrophosphohydrolase NP_417261.1 2909894 R 511145 CDS NP_417262.1 16130689 947252 complement(2910756..2911091) 1 NC_000913.3 probable growth inhibitor, PemK-like, autoregulated; mRNA interferase toxin, antitoxin is MazE 2911091 mazF 947252 mazF Escherichia coli str. K-12 substr. MG1655 mRNA interferase toxin, antitoxin is MazE NP_417262.1 2910756 R 511145 CDS NP_417263.1 16130690 947245 complement(2911091..2911339) 1 NC_000913.3 suppressor of inhibitory function of ChpA, PemI-like, autoregulated; antitoxin of the ChpA-ChpR toxin-antitoxin system 2911339 mazE 947245 mazE Escherichia coli str. K-12 substr. MG1655 antitoxin of the ChpA-ChpR toxin-antitoxin system NP_417263.1 2911091 R 511145 CDS NP_417264.1 16130691 947244 complement(2911417..2913651) 1 NC_000913.3 (p)ppGpp synthetase I (GTP pyrophosphokinase); regulation of RNA synthesis; stringent factor; (p)ppGpp synthetase I/GTP pyrophosphokinase 2913651 relA 947244 relA Escherichia coli str. K-12 substr. MG1655 (p)ppGpp synthetase I/GTP pyrophosphokinase NP_417264.1 2911417 R 511145 CDS NP_417265.1 16130692 947243 complement(2913699..2915000) 1 NC_000913.3 23S rRNA m(5)U1939 methyltransferase, SAM-dependent 2915000 rlmD 947243 rlmD Escherichia coli str. K-12 substr. MG1655 23S rRNA m(5)U1939 methyltransferase, SAM-dependent NP_417265.1 2913699 R 511145 CDS NP_417266.1 16130693 947255 2915057..2917813 1 NC_000913.3 sensor-regulator, activates OmpR by phophorylation; hybrid sensory histidine kinase, in two-component regulatory system with UvrY 2917813 barA 947255 barA Escherichia coli str. K-12 substr. MG1655 hybrid sensory histidine kinase, in two-component regulatory system with UvrY NP_417266.1 2915057 D 511145 CDS NP_417267.1 16130694 947258 complement(2918045..2919385) 1 NC_000913.3 (D)-glucarate dehydratase 1; (L)-idarate dehydratase; (L)-idarate epimerase; (D)-glucarate epimerase; (D)-glucarate dehydratase 1 2919385 gudD 947258 gudD Escherichia coli str. K-12 substr. MG1655 (D)-glucarate dehydratase 1 NP_417267.1 2918045 R 511145 CDS NP_417268.1 16130695 947261 complement(2919406..2920746) 1 NC_000913.3 putative (D)-glucarate dehydratase 2; glucarate dehydratase-related protein, substrate unknown 2920746 gudX 947261 gudX Escherichia coli str. K-12 substr. MG1655 glucarate dehydratase-related protein, substrate unknown NP_417268.1 2919406 R 511145 CDS NP_417269.1 16130696 947265 complement(2920748..2922100) 1 NC_000913.3 putative D-glucarate permease (MFS family); putative D-glucarate transporter 2922100 gudP 947265 gudP Escherichia coli str. K-12 substr. MG1655 putative D-glucarate transporter NP_417269.1 2920748 R 511145 CDS NP_417270.1 16130697 947151 complement(2922535..2922984) 1 NC_000913.3 short-chain flavodoxin, FMN-binding 2922984 yqcA 947151 yqcA Escherichia coli str. K-12 substr. MG1655 short-chain flavodoxin, FMN-binding NP_417270.1 2922535 R 511145 CDS NP_417271.1 16130698 947242 complement(2923002..2923784) 1 NC_000913.3 tRNA(Ile1,Asp) pseudouridine(65) synthase 2923784 truC 947242 truC Escherichia coli str. K-12 substr. MG1655 tRNA(Ile1,Asp) pseudouridine(65) synthase NP_417271.1 2923002 R 511145 CDS NP_417272.1 16130699 946027 complement(2923784..2924113) 1 NC_000913.3 DUF446 family protein 2924113 yqcC 946027 yqcC Escherichia coli str. K-12 substr. MG1655 DUF446 family protein NP_417272.1 2923784 R 511145 CDS NP_417273.1 16130700 947271 complement(2924735..2925280) 1 NC_000913.3 interacts with secY; SecY-interacting protein 2925280 syd 947271 syd Escherichia coli str. K-12 substr. MG1655 SecY-interacting protein NP_417273.1 2924735 R 511145 CDS NP_417274.1 16130701 947270 2925348..2926196 1 NC_000913.3 7-cyano-7-deazaguanine reductase (NADPH-dependent) 2926196 queF 947270 queF Escherichia coli str. K-12 substr. MG1655 7-cyano-7-deazaguanine reductase (NADPH-dependent) NP_417274.1 2925348 D 511145 CDS NP_417275.1 16130702 947266 2926308..2927672 1 NC_000913.3 UPF0717 family protein 2927672 ygdH 947266 ygdH Escherichia coli str. K-12 substr. MG1655 UPF0717 family protein NP_417275.1 2926308 D 511145 CDS NP_417276.1 16130703 947264 2928229..2929518 1 NC_000913.3 probable serine transporter; putative serine transporter 2929518 sdaC 947264 sdaC Escherichia coli str. K-12 substr. MG1655 putative serine transporter NP_417276.1 2928229 D 511145 CDS NP_417277.1 16130704 947262 2929576..2930943 1 NC_000913.3 L-serine dehydratase (deaminase), L-SD2; L-serine dehydratase 2 2930943 sdaB 947262 sdaB Escherichia coli str. K-12 substr. MG1655 L-serine dehydratase 2 NP_417277.1 2929576 D 511145 CDS NP_417278.4 226524743 947256 2931055..2931810 1 NC_000913.3 5'-3' exonuclease; Ssb-binding protein, misidentified as ExoIX 2931810 ygdG 947256 ygdG Escherichia coli str. K-12 substr. MG1655 Ssb-binding protein, misidentified as ExoIX NP_417278.4 2931055 D 511145 CDS NP_417279.2 345452723 947273 complement(2931865..2933013) 1 NC_000913.3 L-1,2-propanediol oxidoreductase 2933013 fucO 947273 fucO Escherichia coli str. K-12 substr. MG1655 L-1,2-propanediol oxidoreductase NP_417279.2 2931865 R 511145 CDS NP_417280.1 16130707 947282 complement(2933041..2933688) 1 NC_000913.3 L-fuculose-1-phosphate aldolase 2933688 fucA 947282 fucA Escherichia coli str. K-12 substr. MG1655 L-fuculose-1-phosphate aldolase NP_417280.1 2933041 R 511145 CDS NP_417281.1 16130708 947487 2934235..2935551 1 NC_000913.3 fucose permease; L-fucose transporter 2935551 fucP 947487 fucP Escherichia coli str. K-12 substr. MG1655 L-fucose transporter NP_417281.1 2934235 D 511145 CDS NP_417282.1 16130709 946195 2935584..2937359 1 NC_000913.3 L-fucose isomerase 2937359 fucI 946195 fucI Escherichia coli str. K-12 substr. MG1655 L-fucose isomerase NP_417282.1 2935584 D 511145 CDS NP_417283.1 16130710 946022 2937438..2938886 1 NC_000913.3 L-fuculokinase 2938886 fucK 946022 fucK Escherichia coli str. K-12 substr. MG1655 L-fuculokinase NP_417283.1 2937438 D 511145 CDS NP_417284.1 16130711 945842 2938888..2939310 1 NC_000913.3 protein of fucose operon; L-fucose mutarotase 2939310 fucU 945842 fucU Escherichia coli str. K-12 substr. MG1655 L-fucose mutarotase NP_417284.1 2938888 D 511145 CDS NP_417285.1 16130712 946905 2939368..2940099 1 NC_000913.3 positive regulator of the fuc operon; l-fucose operon activator 2940099 fucR 946905 fucR Escherichia coli str. K-12 substr. MG1655 l-fucose operon activator NP_417285.1 2939368 D 511145 CDS NP_417286.1 16130713 947283 complement(2940143..2941243) 1 NC_000913.3 23S rRNA C2498 2'-O-ribose methyltransferase, SAM-dependent 2941243 rlmM 947283 rlmM Escherichia coli str. K-12 substr. MG1655 23S rRNA C2498 2'-O-ribose methyltransferase, SAM-dependent NP_417286.1 2940143 R 511145 CDS NP_417287.1 16130714 947279 complement(2941236..2941631) 1 NC_000913.3 UPF0382 family inner membrane protein 2941631 ygdD 947279 ygdD Escherichia coli str. K-12 substr. MG1655 UPF0382 family inner membrane protein NP_417287.1 2941236 R 511145 CDS NP_417288.1 16130715 947278 complement(2941650..2942567) 1 NC_000913.3 positive regulator of gcv operon; glycine cleavage system transcriptional activator; autorepressor 2942567 gcvA 947278 gcvA Escherichia coli str. K-12 substr. MG1655 glycine cleavage system transcriptional activator; autorepressor NP_417288.1 2941650 R 511145 CDS NP_417289.2 90111491 947276 complement(2942918..2943145) 1 NC_000913.3 DUF903 family verified lipoprotein 2943145 ygdI 947276 ygdI Escherichia coli str. K-12 substr. MG1655 DUF903 family verified lipoprotein NP_417289.2 2942918 R 511145 CDS NP_417290.1 16130717 947275 2943337..2944542 1 NC_000913.3 cysteine sulfinate desulfinase 2944542 csdA 947275 csdA Escherichia coli str. K-12 substr. MG1655 cysteine sulfinate desulfinase NP_417290.1 2943337 D 511145 CDS NP_417291.1 16130718 947274 2944542..2944985 1 NC_000913.3 CsdA-binding activator; Fe-S protein 2944985 csdE 947274 csdE Escherichia coli str. K-12 substr. MG1655 CsdA-binding activator; Fe-S protein NP_417291.1 2944542 D 511145 CDS NP_417292.1 16130719 947291 complement(2945036..2945842) 1 NC_000913.3 putative enzyme; tRNA threonylcarbamoyladenosine dehydratase; sulfur acceptor for CsdA 2945842 tcdA 947291 tcdA Escherichia coli str. K-12 substr. MG1655 tRNA threonylcarbamoyladenosine dehydratase; sulfur acceptor for CsdA NP_417292.1 2945036 R 511145 CDS NP_417293.1 16130720 944964 complement(2946081..2947178) 1 NC_000913.3 membrane-bound lytic murein transglycosylase A 2947178 mltA 944964 mltA Escherichia coli str. K-12 substr. MG1655 membrane-bound lytic murein transglycosylase A NP_417293.1 2946081 R 511145 CDS NP_417294.4 90111492 947293 complement(2947757..2949010) 1 NC_000913.3 N-acetylmuramoyl-L-alanine amidase 2949010 amiC 947293 amiC Escherichia coli str. K-12 substr. MG1655 N-acetylmuramoyl-L-alanine amidase NP_417294.4 2947757 R 511145 CDS NP_417295.1 16130722 947289 2949242..2950573 1 NC_000913.3 N-acetylglutamate synthase; amino acid acetyltransferase; fused acetylglutamate kinase homolog (inactive)/amino acid N-acetyltransferase 2950573 argA 947289 argA Escherichia coli str. K-12 substr. MG1655 fused acetylglutamate kinase homolog (inactive)/amino acid N-acetyltransferase NP_417295.1 2949242 D 511145 CDS NP_417296.1 16130723 947287 complement(2950635..2952461) 1 NC_000913.3 DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease; exonuclease V (RecBCD complex), alpha chain 2952461 recD 947287 recD Escherichia coli str. K-12 substr. MG1655 exonuclease V (RecBCD complex), alpha chain NP_417296.1 2950635 R 511145 CDS NP_417297.1 16130724 947286 complement(2952461..2956003) 1 NC_000913.3 DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease; exonuclease V (RecBCD complex), beta subunit 2956003 recB 947286 recB Escherichia coli str. K-12 substr. MG1655 exonuclease V (RecBCD complex), beta subunit NP_417297.1 2952461 R 511145 CDS NP_417298.1 16130725 947284 complement(2955996..2958884) 1 NC_000913.3 protease III 2958884 ptrA 947284 ptrA Escherichia coli str. K-12 substr. MG1655 protease III NP_417298.1 2955996 R 511145 CDS NP_417299.1 16130726 947294 complement(2959060..2962428) 1 NC_000913.3 DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease; exonuclease V (RecBCD complex), gamma chain 2962428 recC 947294 recC Escherichia coli str. K-12 substr. MG1655 exonuclease V (RecBCD complex), gamma chain NP_417299.1 2959060 R 511145 CDS NP_417300.1 16130727 945797 complement(2962441..2962764) 1 NC_000913.3 prepilin peptidase dependent protein C; putative prepilin peptidase-dependent protein 2962764 ppdC 945797 ppdC Escherichia coli str. K-12 substr. MG1655 putative prepilin peptidase-dependent protein NP_417300.1 2962441 R 511145 CDS NP_417301.4 90111493 944763 complement(2962749..2963156) 1 NC_000913.3 DUF2509 family protein 2963156 ygdB 944763 ygdB Escherichia coli str. K-12 substr. MG1655 DUF2509 family protein NP_417301.4 2962749 R 511145 CDS NP_417302.1 16130729 948985 complement(2963153..2963716) 1 NC_000913.3 prepilin peptidase dependent protein B; putative prepilin peptidase-dependent protein 2963716 ppdB 948985 ppdB Escherichia coli str. K-12 substr. MG1655 putative prepilin peptidase-dependent protein NP_417302.1 2963153 R 511145 CDS NP_417303.1 16130730 945393 complement(2963707..2964177) 1 NC_000913.3 prepilin peptidase dependent protein A; putative prepilin peptidase-dependent protein 2964177 ppdA 945393 ppdA Escherichia coli str. K-12 substr. MG1655 putative prepilin peptidase-dependent protein NP_417303.1 2963707 R 511145 CDS NP_417304.1 16130731 949035 complement(2964361..2965155) 1 NC_000913.3 thymidylate synthetase 2965155 thyA 949035 thyA Escherichia coli str. K-12 substr. MG1655 thymidylate synthetase NP_417304.1 2964361 R 511145 CDS NP_417305.1 16130732 947303 complement(2965162..2966037) 1 NC_000913.3 phosphatidylglycerol-prolipoprotein diacylglyceryl transferase; a major membrane phospholipid; phosphatidylglycerol-prolipoprotein diacylglyceryl transferase 2966037 lgt 947303 lgt Escherichia coli str. K-12 substr. MG1655 phosphatidylglycerol-prolipoprotein diacylglyceryl transferase NP_417305.1 2965162 R 511145 CDS NP_417306.1 16130733 947301 complement(2966188..2968434) 1 NC_000913.3 PTS system, enzyme I, transcriptional regulator (with NPR and NTR proteins); fused PTS enzyme: PEP-protein phosphotransferase (enzyme I)/GAF domain containing protein 2968434 ptsP 947301 ptsP Escherichia coli str. K-12 substr. MG1655 fused PTS enzyme: PEP-protein phosphotransferase (enzyme I)/GAF domain containing protein NP_417306.1 2966188 R 511145 CDS NP_417307.1 16130734 947300 complement(2968447..2968977) 1 NC_000913.3 putative invasion protein; RNA pyrophosphohydrolase 2968977 rppH 947300 rppH Escherichia coli str. K-12 substr. MG1655 RNA pyrophosphohydrolase NP_417307.1 2968447 R 511145 CDS NP_417308.1 16130735 947299 2969662..2970351 1 NC_000913.3 methyl-directed mismatch repair; methyl-directed mismatch repair protein 2970351 mutH 947299 mutH Escherichia coli str. K-12 substr. MG1655 methyl-directed mismatch repair protein NP_417308.1 2969662 D 511145 CDS NP_417309.1 16130736 947295 2970420..2971133 1 NC_000913.3 putative transport protein; UPF0053 family inner membrane protein 2971133 ygdQ 947295 ygdQ Escherichia coli str. K-12 substr. MG1655 UPF0053 family inner membrane protein NP_417309.1 2970420 D 511145 CDS NP_417310.1 16130737 947304 2971271..2971489 1 NC_000913.3 DUF903 family verified lipoprotein 2971489 ygdR 947304 ygdR Escherichia coli str. K-12 substr. MG1655 DUF903 family verified lipoprotein NP_417310.1 2971271 D 511145 CDS NP_417311.1 16130738 947306 2971597..2972637 1 NC_000913.3 putative NADP(H)-dependent aldo-keto reductase 2972637 tas 947306 tas Escherichia coli str. K-12 substr. MG1655 putative NADP(H)-dependent aldo-keto reductase NP_417311.1 2971597 D 511145 CDS NP_417312.1 16130739 947317 complement(2972669..2973862) 1 NC_000913.3 putative resistance proteins; lysophospholipid transporter 2973862 lplT 947317 lplT Escherichia coli str. K-12 substr. MG1655 lysophospholipid transporter NP_417312.1 2972669 R 511145 CDS NP_417313.1 16130740 947315 complement(2973855..2976014) 1 NC_000913.3 2-acyl-glycerophospho-ethanolamine acyltransferase; acyl-acyl-carrier protein synthetase; fused 2-acylglycerophospho-ethanolamine acyl transferase/acyl-acyl carrier protein synthetase 2976014 aas 947315 aas Escherichia coli str. K-12 substr. MG1655 fused 2-acylglycerophospho-ethanolamine acyl transferase/acyl-acyl carrier protein synthetase NP_417313.1 2973855 R 511145 CDS NP_417314.1 16130741 947314 2976599..2977630 1 NC_000913.3 repressor of galETK operon; galactose-inducible d-galactose regulon transcriptional repressor; autorepressor 2977630 galR 947314 galR Escherichia coli str. K-12 substr. MG1655 galactose-inducible d-galactose regulon transcriptional repressor; autorepressor NP_417314.1 2976599 D 511145 CDS NP_417315.1 16130742 947313 complement(2977637..2978899) 1 NC_000913.3 diaminopimelate decarboxylase; diaminopimelate decarboxylase, PLP-binding 2978899 lysA 947313 lysA Escherichia coli str. K-12 substr. MG1655 diaminopimelate decarboxylase, PLP-binding NP_417315.1 2977637 R 511145 CDS NP_417316.1 16130743 947311 2979021..2979956 1 NC_000913.3 positive regulator for lys; transcriptional activator of lysA; autorepressor 2979956 lysR 947311 lysR Escherichia coli str. K-12 substr. MG1655 transcriptional activator of lysA; autorepressor NP_417316.1 2979021 D 511145 CDS NP_417317.1 16130744 947348 complement(2979943..2980635) 1 NC_000913.3 putative resistance proteins; Asp/Glu_racemase family protein 2980635 ygeA 947348 ygeA Escherichia coli str. K-12 substr. MG1655 Asp/Glu_racemase family protein NP_417317.1 2979943 R 511145 CDS NP_417318.1 16130745 947341 complement(2980764..2982182) 1 NC_000913.3 low-affinity L-arabinose transport system proton symport protein; arabinose transporter 2982182 araE 947341 araE Escherichia coli str. K-12 substr. MG1655 arabinose transporter NP_417318.1 2980764 R 511145 CDS NP_417319.1 16130746 947323 complement(2982497..2983258) 1 NC_000913.3 hexuronate dehydrogenase; hexuronate utilization in high osmolarity 2983258 kduD 947323 kduD Escherichia coli str. K-12 substr. MG1655 hexuronate dehydrogenase; hexuronate utilization in high osmolarity NP_417319.1 2982497 R 511145 CDS NP_417320.1 16130747 947319 complement(2983288..2984124) 1 NC_000913.3 homolog of pectin degrading enzyme 5-keto 4-deoxyuronate isomerase; hexuronate isomerase; hexuronate utilization in high osmolarity 2984124 kduI 947319 kduI Escherichia coli str. K-12 substr. MG1655 hexuronate isomerase; hexuronate utilization in high osmolarity NP_417320.1 2983288 R 511145 CDS NP_417321.2 90111494 947324 complement(2984411..2985592) 1 NC_000913.3 putative acyltransferase; short chain acyltransferase 2985592 yqeF 947324 yqeF Escherichia coli str. K-12 substr. MG1655 short chain acyltransferase NP_417321.2 2984411 R 511145 CDS NP_417322.1 16130749 945028 2985847..2987076 1 NC_000913.3 putative transporter protein; putative transporter 2987076 yqeG 945028 yqeG Escherichia coli str. K-12 substr. MG1655 putative transporter NP_417322.1 2985847 D 511145 CDS NP_417323.2 90111495 945263 2987536..2988168 1 NC_000913.3 putative LuxR family transcriptional regulator 2988168 yqeH 945263 yqeH Escherichia coli str. K-12 substr. MG1655 putative LuxR family transcriptional regulator NP_417323.2 2987536 D 511145 CDS NP_417324.1 16130751 947327 2988502..2989311 1 NC_000913.3 putative sensory transducer; putative transcriptional regulator 2989311 yqeI 947327 yqeI Escherichia coli str. K-12 substr. MG1655 putative transcriptional regulator NP_417324.1 2988502 D 511145 CDS NP_417325.4 90111496 947328 2989304..2989786 1 NC_000913.3 uncharacterized protein 2989786 yqeJ 947328 yqeJ Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_417325.4 2989304 D 511145 CDS YP_002791253.1 226524744 7751637 complement(2989819..2989899) 1 NC_000913.3 uncharacterized protein 2989899 yqeL 7751637 yqeL Escherichia coli str. K-12 substr. MG1655 uncharacterized protein YP_002791253.1 2989819 R 511145 CDS NP_417326.2 90111497 947329 complement(2989935..2990360) 1 NC_000913.3 uncharacterized protein 2990360 yqeK 947329 yqeK Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_417326.2 2989935 R 511145 CDS b2850 946823 join(2990554..2990949,2990948..2991043) 1 NC_000913.3 pseudogene; <NULL_VALUE> 2991043 ygeF 946823 ygeF Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 2990554 D 511145 CDS NP_417328.1 16130755 946986 2991268..2991759 1 NC_000913.3 SycD-like chaperone family TPR-repeat-containing protein 2991759 ygeG 946986 ygeG Escherichia coli str. K-12 substr. MG1655 SycD-like chaperone family TPR-repeat-containing protein NP_417328.1 2991268 D 511145 CDS NP_417329.1 16130756 946265 2992094..2993470 1 NC_000913.3 putative invasion protein; putative transcriptional regulator 2993470 ygeH 946265 ygeH Escherichia coli str. K-12 substr. MG1655 putative transcriptional regulator NP_417329.1 2992094 D 511145 CDS NP_417330.1 16130757 947336 2993638..2993856 1 NC_000913.3 uncharacterized protein 2993856 ygeI 947336 ygeI Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_417330.1 2993638 D 511145 CDS b2854 947338 join(2993939..2994382,2994382..2994441) 1 NC_000913.3 pseudogene, peptidoglycan-binding enzyme family; <NULL_VALUE> 2994441 pbl 947338 pbl Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 2993939 D 511145 CDS b2856 947332 complement(2994460..2995092) 1 NC_000913.3 pseudogene; putative 2-component transcriptional regulator; <NULL_VALUE> 2995092 ygeK 947332 ygeK Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 2994460 R 511145 CDS b2858 2847705 complement(join(2995314..2995760,2995760..2996020)) 1 NC_000913.3 pseudogene; <NULL_VALUE> 2996020 ygeN 2847705 ygeN Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 2995314 R 511145 CDS b2859 947325 complement(2995962..2996360) 1 NC_000913.3 pseudogene, orgA homolog, part of T3SS PAI ETT2 remnant; <NULL_VALUE> 2996360 ygeO 947325 ygeO Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 2995962 R 511145 CDS NP_417337.1 16130763 947346 complement(2996372..2997277) 1 NC_000913.3 IS2 transposase TnpB 2997277 insD1 947346 insD1 Escherichia coli str. K-12 substr. MG1655 IS2 transposase TnpB NP_417337.1 2996372 R 511145 CDS NP_417338.3 145698306 947347 complement(2997235..2997600) 1 NC_000913.3 IS2 repressor TnpA 2997600 insC1 947347 insC1 Escherichia coli str. K-12 substr. MG1655 IS2 repressor TnpA NP_417338.3 2997235 R 511145 CDS b2863 947344 complement(2997692..2998828) 1 NC_000913.3 pseudogene; <NULL_VALUE> 2998828 ygeQ 947344 ygeQ Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 2997692 R 511145 CDS NP_417341.4 90111503 947352 complement(2999136..2999891) 1 NC_000913.3 putative lipoprotein; LysM domain-containing M23 family putative peptidase; septation lipoprotein 2999891 ygeR 947352 ygeR Escherichia coli str. K-12 substr. MG1655 LysM domain-containing M23 family putative peptidase; septation lipoprotein NP_417341.4 2999136 R 511145 CDS NP_417342.1 16130768 947116 3000345..3002603 1 NC_000913.3 xanthine dehydrogenase, molybdenum binding subunit 3002603 xdhA 947116 xdhA Escherichia coli str. K-12 substr. MG1655 xanthine dehydrogenase, molybdenum binding subunit NP_417342.1 3000345 D 511145 CDS NP_417343.1 16130769 947205 3002614..3003492 1 NC_000913.3 xanthine dehydrogenase, FAD-binding subunit 3003492 xdhB 947205 xdhB Escherichia coli str. K-12 substr. MG1655 xanthine dehydrogenase, FAD-binding subunit NP_417343.1 3002614 D 511145 CDS NP_417344.1 16130770 945148 3003489..3003968 1 NC_000913.3 xanthine dehydrogenase, Fe-S binding subunit 3003968 xdhC 945148 xdhC Escherichia coli str. K-12 substr. MG1655 xanthine dehydrogenase, Fe-S binding subunit NP_417344.1 3003489 D 511145 CDS NP_417345.1 16130771 947320 complement(3004008..3005786) 1 NC_000913.3 putative transcriptional regulator; putative sigma-54-interacting transcriptional activator 3005786 ygeV 947320 ygeV Escherichia coli str. K-12 substr. MG1655 putative sigma-54-interacting transcriptional activator NP_417345.1 3004008 R 511145 CDS YP_026185.1 49176276 945826 3006262..3007452 1 NC_000913.3 putative carbamoyl transferase; putative carbamoyltransferase 3007452 ygeW 945826 ygeW Escherichia coli str. K-12 substr. MG1655 putative carbamoyltransferase YP_026185.1 3006262 D 511145 CDS NP_417347.1 16130773 947012 3007510..3008706 1 NC_000913.3 putative diaminopropionate ammonia-lyase; 2,3-diaminopropionate ammonia lyase, PLP-dependent 3008706 ygeX 947012 ygeX Escherichia coli str. K-12 substr. MG1655 2,3-diaminopropionate ammonia lyase, PLP-dependent NP_417347.1 3007510 D 511145 CDS NP_417348.1 16130774 947360 3008764..3009975 1 NC_000913.3 putative deacetylase; putative peptidase 3009975 ygeY 947360 ygeY Escherichia coli str. K-12 substr. MG1655 putative peptidase NP_417348.1 3008764 D 511145 CDS NP_417349.4 90111504 947359 3010028..3011413 1 NC_000913.3 D-stereospecific phenylhydantoinase 3011413 hyuA 947359 hyuA Escherichia coli str. K-12 substr. MG1655 D-stereospecific phenylhydantoinase NP_417349.4 3010028 D 511145 CDS NP_417350.1 16130776 947358 3011461..3012393 1 NC_000913.3 putative kinase; putative amino acid kinase 3012393 yqeA 947358 yqeA Escherichia coli str. K-12 substr. MG1655 putative amino acid kinase NP_417350.1 3011461 D 511145 CDS NP_417351.1 16130777 947357 complement(3012614..3014239) 1 NC_000913.3 putative synthases; XdhC-CoxI family protein with NAD(P)-binding Rossman fold 3014239 yqeB 947357 yqeB Escherichia coli str. K-12 substr. MG1655 XdhC-CoxI family protein with NAD(P)-binding Rossman fold NP_417351.1 3012614 R 511145 CDS NP_417352.2 90111505 947350 complement(3014287..3015057) 1 NC_000913.3 putative selenium-dependent hydroxylase accessory protein 3015057 yqeC 947350 yqeC Escherichia coli str. K-12 substr. MG1655 putative selenium-dependent hydroxylase accessory protein NP_417352.2 3014287 R 511145 CDS NP_417353.1 16130779 947356 3015160..3015738 1 NC_000913.3 CTP:molybdopterin cytidylyltransferase 3015738 mocA 947356 mocA Escherichia coli str. K-12 substr. MG1655 CTP:molybdopterin cytidylyltransferase NP_417353.1 3015160 D 511145 CDS NP_417354.1 16130780 949068 3016060..3019158 1 NC_000913.3 putative oxidoreductase, Fe-S subunit; putative Fe-S subunit oxidoreductase subunit 3019158 ygfK 949068 ygfK Escherichia coli str. K-12 substr. MG1655 putative Fe-S subunit oxidoreductase subunit NP_417354.1 3016060 D 511145 CDS NP_417355.4 90111506 949072 3019161..3020489 1 NC_000913.3 putative chlorohydrolase/aminohydrolase 3020489 ssnA 949072 ssnA Escherichia coli str. K-12 substr. MG1655 putative chlorohydrolase/aminohydrolase NP_417355.4 3019161 D 511145 CDS NP_417356.1 16130782 949071 3020540..3021319 1 NC_000913.3 putative oxidoreductase 3021319 ygfM 949071 ygfM Escherichia coli str. K-12 substr. MG1655 putative oxidoreductase NP_417356.1 3020540 D 511145 CDS NP_417357.1 16130783 949079 3021316..3024186 1 NC_000913.3 putative hypoxanthine oxidase, molybdopterin-binding/Fe-S binding 3024186 xdhD 949079 xdhD Escherichia coli str. K-12 substr. MG1655 putative hypoxanthine oxidase, molybdopterin-binding/Fe-S binding NP_417357.1 3021316 D 511145 CDS NP_417358.2 90111507 949075 3024351..3025751 1 NC_000913.3 xanthine permease 3025751 xanQ 949075 xanQ Escherichia coli str. K-12 substr. MG1655 xanthine permease NP_417358.2 3024351 D 511145 CDS NP_417359.1 16130785 947366 3025766..3027085 1 NC_000913.3 guanine deaminase 3027085 guaD 947366 guaD Escherichia coli str. K-12 substr. MG1655 guanine deaminase NP_417359.1 3025766 D 511145 CDS YP_026186.1 49176279 2847748 3027121..3028488 1 NC_000913.3 putative purine permease 3028488 ygfQ 2847748 ygfQ Escherichia coli str. K-12 substr. MG1655 putative purine permease YP_026186.1 3027121 D 511145 CDS NP_417362.4 90111508 949016 complement(3028524..3029012) 1 NC_000913.3 putative oxidoreductase, Fe-S subunit; putative 4Fe-4S ferredoxin-type oxidoreductase subunit 3029012 ygfS 949016 ygfS Escherichia coli str. K-12 substr. MG1655 putative 4Fe-4S ferredoxin-type oxidoreductase subunit NP_417362.4 3028524 R 511145 CDS NP_417363.2 90111509 949018 complement(3029012..3030931) 1 NC_000913.3 putative oxidoreductase, Fe-S subunit; putative oxidoreductase, Fe-S subunit/nucleotide-binding subunit 3030931 ygfT 949018 ygfT Escherichia coli str. K-12 substr. MG1655 putative oxidoreductase, Fe-S subunit/nucleotide-binding subunit NP_417363.2 3029012 R 511145 CDS NP_417364.2 90111510 949017 3031367..3032815 1 NC_000913.3 putative permease; uric acid permease 3032815 uacT 949017 uacT Escherichia coli str. K-12 substr. MG1655 uric acid permease NP_417364.2 3031367 D 511145 CDS YP_002791254.1 226524745 7751638 3032817..3032942 1 NC_000913.3 uncharacterized protein 3032942 yqfG 7751638 yqfG Escherichia coli str. K-12 substr. MG1655 uncharacterized protein YP_002791254.1 3032817 D 511145 CDS NP_417365.1 16130791 949020 3033065..3033613 1 NC_000913.3 isopentenyl diphosphate isomerase 3033613 idi 949020 idi Escherichia coli str. K-12 substr. MG1655 isopentenyl diphosphate isomerase NP_417365.1 3033065 D 511145 CDS NP_417366.1 16130792 947372 complement(3033657..3035174) 1 NC_000913.3 lysine tRNA synthetase, constitutive; suppressor of ColE1 mutation in primer RNA; lysine tRNA synthetase, constitutive 3035174 lysS 947372 lysS Escherichia coli str. K-12 substr. MG1655 lysine tRNA synthetase, constitutive NP_417366.1 3033657 R 511145 CDS NP_417367.1 16130793 947369 complement(join(3035184..3036206,3036208..3036282)) 1 NC_000913.3 an in-frame premature UGA termination codon is located within the prfB sequence, and a naturally occuring +1 frameshift is required for synthesis of RF-2; peptide chain release factor RF-2 3036282 prfB 947369 prfB Escherichia coli str. K-12 substr. MG1655 peptide chain release factor RF-2 NP_417367.1 3035184 R 511145 CDS NP_417368.1 16130794 947367 complement(3036373..3038106) 1 NC_000913.3 ssDNA exonuclease, 5' --> 3' specific; ssDNA exonuclease, 5' --> 3'-specific 3038106 recJ 947367 recJ Escherichia coli str. K-12 substr. MG1655 ssDNA exonuclease, 5' --> 3'-specific NP_417368.1 3036373 R 511145 CDS NP_417369.1 16130795 947363 complement(3038112..3038822) 1 NC_000913.3 protein disulfide isomerase II 3038822 dsbC 947363 dsbC Escherichia coli str. K-12 substr. MG1655 protein disulfide isomerase II NP_417369.1 3038112 R 511145 CDS NP_417370.1 16130796 947362 complement(3038847..3039743) 1 NC_000913.3 site-specific tyrosine recombinase 3039743 xerD 947362 xerD Escherichia coli str. K-12 substr. MG1655 site-specific tyrosine recombinase NP_417370.1 3038847 R 511145 CDS NP_417371.1 16130797 947361 3039855..3040376 1 NC_000913.3 flavodoxin 2 3040376 fldB 947361 fldB Escherichia coli str. K-12 substr. MG1655 flavodoxin 2 NP_417371.1 3039855 D 511145 CDS NP_417372.1 16130798 947379 complement(3040416..3040823) 1 NC_000913.3 toxin of CptAB toxin-antitoxin pair 3040823 cptA 947379 cptA Escherichia coli str. K-12 substr. MG1655 toxin of CptAB toxin-antitoxin pair NP_417372.1 3040416 R 511145 CDS NP_417373.1 16130799 947382 complement(3040804..3041070) 1 NC_000913.3 flavinator of succinate dehydrogenase; antitoxin of CptAB toxin-antitoxin pair 3041070 sdhE 947382 sdhE Escherichia coli str. K-12 substr. MG1655 flavinator of succinate dehydrogenase; antitoxin of CptAB toxin-antitoxin pair NP_417373.1 3040804 R 511145 CDS NP_417374.1 16130800 947384 3041313..3042293 1 NC_000913.3 iron-sulfur cluster repair protein, plumbagin resistance 3042293 ygfZ 947384 ygfZ Escherichia coli str. K-12 substr. MG1655 iron-sulfur cluster repair protein, plumbagin resistance NP_417374.1 3041313 D 511145 CDS NP_417375.1 16130801 947381 complement(3042489..3043148) 1 NC_000913.3 putative oxidoreductase; hemolysin III family HylIII inner membrane protein 3043148 yqfA 947381 yqfA Escherichia coli str. K-12 substr. MG1655 hemolysin III family HylIII inner membrane protein NP_417375.1 3042489 R 511145 CDS NP_417376.1 16130802 947380 complement(3043312..3043623) 1 NC_000913.3 UPF0267 family protein 3043623 yqfB 947380 yqfB Escherichia coli str. K-12 substr. MG1655 UPF0267 family protein NP_417376.1 3043312 R 511145 CDS NP_417377.1 16130803 947378 3043662..3045101 1 NC_000913.3 6-phospho-beta-glucosidase A; cryptic; 6-phospho-beta-glucosidase A 3045101 bglA 947378 bglA Escherichia coli str. K-12 substr. MG1655 6-phospho-beta-glucosidase A NP_417377.1 3043662 D 511145 CDS NP_417378.1 16130804 947373 complement(3045158..3045901) 1 NC_000913.3 putative oxidoreductase; putative NAD(P)-dependent oxidoreductase with NAD(P)-binding Rossmann-fold domain 3045901 ygfF 947373 ygfF Escherichia coli str. K-12 substr. MG1655 putative NAD(P)-dependent oxidoreductase with NAD(P)-binding Rossmann-fold domain NP_417378.1 3045158 R 511145 CDS NP_417379.1 16130805 947394 complement(3046168..3049041) 1 NC_000913.3 glycine decarboxylase, P protein of glycine cleavage system; glycine decarboxylase, PLP-dependent, subunit (protein P) of glycine cleavage complex 3049041 gcvP 947394 gcvP Escherichia coli str. K-12 substr. MG1655 glycine decarboxylase, PLP-dependent, subunit (protein P) of glycine cleavage complex NP_417379.1 3046168 R 511145 CDS NP_417380.1 16130806 947393 complement(3049160..3049549) 1 NC_000913.3 in glycine cleavage complex, carrier of aminomethyl moiety via covalently bound lipoyl cofactor; glycine cleavage complex lipoylprotein 3049549 gcvH 947393 gcvH Escherichia coli str. K-12 substr. MG1655 glycine cleavage complex lipoylprotein NP_417380.1 3049160 R 511145 CDS NP_417381.1 16130807 947390 complement(3049573..3050667) 1 NC_000913.3 aminomethyltransferase (T protein; tetrahydrofolate-dependent) of glycine cleavage system; aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex 3050667 gcvT 947390 gcvT Escherichia coli str. K-12 substr. MG1655 aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex NP_417381.1 3049573 R 511145 CDS NP_417382.1 16130808 947389 complement(3051115..3052317) 1 NC_000913.3 2-octaprenylphenol hydroxylase, FAD-dependent 3052317 ubiI 947389 ubiI Escherichia coli str. K-12 substr. MG1655 2-octaprenylphenol hydroxylase, FAD-dependent NP_417382.1 3051115 R 511145 CDS NP_417383.1 16130809 947388 complement(3052340..3053518) 1 NC_000913.3 2-octaprenyl-6-methoxyphenol--> 2-octaprenyl-6-methoxy-1, 4-benzoquinone; 2-octaprenyl-6-methoxyphenol hydroxylase, FAD/NAD(P)-binding 3053518 ubiH 947388 ubiH Escherichia coli str. K-12 substr. MG1655 2-octaprenyl-6-methoxyphenol hydroxylase, FAD/NAD(P)-binding NP_417383.1 3052340 R 511145 CDS NP_417384.1 16130810 947385 complement(3053515..3054840) 1 NC_000913.3 proline aminopeptidase P II 3054840 pepP 947385 pepP Escherichia coli str. K-12 substr. MG1655 proline aminopeptidase P II NP_417384.1 3053515 R 511145 CDS NP_417385.4 90111511 947400 complement(3054866..3055444) 1 NC_000913.3 UPF0149 family protein 3055444 ygfB 947400 ygfB Escherichia coli str. K-12 substr. MG1655 UPF0149 family protein NP_417385.4 3054866 R 511145 CDS NP_417386.1 16130812 947404 3055612..3055941 1 NC_000913.3 FtsZ stabilizer 3055941 zapA 947404 zapA Escherichia coli str. K-12 substr. MG1655 FtsZ stabilizer NP_417386.1 3055612 D 511145 CDS NP_417387.3 49176282 945167 3056241..3056789 1 NC_000913.3 putative ligase; 5-formyltetrahydrofolate cyclo-ligase family protein 3056789 fau 945167 fau Escherichia coli str. K-12 substr. MG1655 5-formyltetrahydrofolate cyclo-ligase family protein NP_417387.3 3056241 D 511145 CDS YP_002791255.1 226524746 7751627 complement(3056890..3056949) 1 NC_000913.3 toxic membrane protein 3056949 ibsC 7751627 ibsC Escherichia coli str. K-12 substr. MG1655 toxic membrane protein YP_002791255.1 3056890 R 511145 CDS NP_417388.1 16130814 945258 complement(3057178..3058410) 1 NC_000913.3 D-3-phosphoglycerate dehydrogenase 3058410 serA 945258 serA Escherichia coli str. K-12 substr. MG1655 D-3-phosphoglycerate dehydrogenase NP_417388.1 3057178 R 511145 CDS NP_417389.1 16130815 947407 complement(3058666..3059325) 1 NC_000913.3 ribosephosphate isomerase, constitutive; ribose 5-phosphate isomerase, constitutive 3059325 rpiA 947407 rpiA Escherichia coli str. K-12 substr. MG1655 ribose 5-phosphate isomerase, constitutive NP_417389.1 3058666 R 511145 CDS b2915 946707 complement(3059381..3059701) 1 NC_000913.3 pseudogene, LysR family; <NULL_VALUE> 3059701 yqfE 946707 yqfE Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 3059381 R 511145 CDS NP_417391.1 16130817 944867 3059753..3060646 1 NC_000913.3 replication initiation inhibitor, binds to 13-mers at oriC; transcriptional regulator for arginine transport and DNA replication genes; replication initiation inhibitor 3060646 argP 944867 argP Escherichia coli str. K-12 substr. MG1655 transcriptional regulator for arginine transport and DNA replication genes; replication initiation inhibitor NP_417391.1 3059753 D 511145 CDS NP_417392.1 16130818 945576 3060850..3062994 1 NC_000913.3 methylmalonyl-CoA mutase (MCM); methylmalonyl-CoA mutase 3062994 scpA 945576 scpA Escherichia coli str. K-12 substr. MG1655 methylmalonyl-CoA mutase NP_417392.1 3060850 D 511145 CDS NP_417393.1 16130819 947412 3062987..3063982 1 NC_000913.3 membrane ATPase/protein kinase 3063982 argK 947412 argK Escherichia coli str. K-12 substr. MG1655 membrane ATPase/protein kinase NP_417393.1 3062987 D 511145 CDS NP_417394.4 90111512 947408 3063993..3064778 1 NC_000913.3 putative enzyme; methylmalonyl-CoA decarboxylase, biotin-independent 3064778 scpB 947408 scpB Escherichia coli str. K-12 substr. MG1655 methylmalonyl-CoA decarboxylase, biotin-independent NP_417394.4 3063993 D 511145 CDS NP_417395.1 16130821 947402 3064802..3066280 1 NC_000913.3 putative coenzyme A transferase; propionyl-CoA:succinate CoA transferase 3066280 scpC 947402 scpC Escherichia coli str. K-12 substr. MG1655 propionyl-CoA:succinate CoA transferase NP_417395.1 3064802 D 511145 CDS NP_417396.4 90111513 947401 complement(3066277..3067173) 1 NC_000913.3 putative transcriptional regulator LYSR-type; putative DNA-binding transcriptional regulator 3067173 ygfI 947401 ygfI Escherichia coli str. K-12 substr. MG1655 putative DNA-binding transcriptional regulator NP_417396.4 3066277 R 511145 CDS NP_417397.1 16130823 947398 complement(3067340..3068080) 1 NC_000913.3 putative actin; oxidative stress defense protein 3068080 yggE 947398 yggE Escherichia coli str. K-12 substr. MG1655 oxidative stress defense protein NP_417397.1 3067340 R 511145 CDS NP_417398.1 16130824 947418 complement(3068173..3068808) 1 NC_000913.3 arginine transporter 3068808 argO 947418 argO Escherichia coli str. K-12 substr. MG1655 arginine transporter NP_417398.1 3068173 R 511145 CDS NP_417399.1 16130825 947416 complement(3068947..3069807) 1 NC_000913.3 mechanosensitive channel protein, small conductance 3069807 mscS 947416 mscS Escherichia coli str. K-12 substr. MG1655 mechanosensitive channel protein, small conductance NP_417399.1 3068947 R 511145 CDS NP_417400.1 16130826 947415 complement(3070165..3071244) 1 NC_000913.3 fructose-bisphosphate aldolase, class II 3071244 fbaA 947415 fbaA Escherichia coli str. K-12 substr. MG1655 fructose-bisphosphate aldolase, class II NP_417400.1 3070165 R 511145 CDS NP_417401.1 16130827 947414 complement(3071459..3072622) 1 NC_000913.3 phosphoglycerate kinase 3072622 pgk 947414 pgk Escherichia coli str. K-12 substr. MG1655 phosphoglycerate kinase NP_417401.1 3071459 R 511145 CDS NP_417402.1 16130828 947413 complement(3072672..3073691) 1 NC_000913.3 D-erythrose 4-phosphate dehydrogenase 3073691 epd 947413 epd Escherichia coli str. K-12 substr. MG1655 D-erythrose 4-phosphate dehydrogenase NP_417402.1 3072672 R 511145 CDS NP_417403.1 16130829 947419 complement(3073976..3074689) 1 NC_000913.3 putative kinase; putative PanK family P-loop kinase 3074689 yggC 947419 yggC Escherichia coli str. K-12 substr. MG1655 putative PanK family P-loop kinase NP_417403.1 3073976 R 511145 CDS NP_417404.1 16130830 946861 complement(3074686..3075195) 1 NC_000913.3 putative transcriptional regulator; MtlR family putative transcriptional repressor 3075195 yggD 946861 yggD Escherichia coli str. K-12 substr. MG1655 MtlR family putative transcriptional repressor NP_417404.1 3074686 R 511145 CDS NP_417405.1 16130831 947410 complement(3075217..3076182) 1 NC_000913.3 fructose 1,6 bisphosphatase isozyme 3076182 yggF 947410 yggF Escherichia coli str. K-12 substr. MG1655 fructose 1,6 bisphosphatase isozyme NP_417405.1 3075217 R 511145 CDS YP_026187.1 49176285 2847686 complement(3076179..3077456) 1 NC_000913.3 putative Zn-binding dehydrogenase 3077456 yggP 2847686 yggP Escherichia coli str. K-12 substr. MG1655 putative Zn-binding dehydrogenase YP_026187.1 3076179 R 511145 CDS NP_417408.1 16130834 945256 complement(3077471..3078859) 1 NC_000913.3 PTS system, mannitol-specific enzyme II component, cryptic; putative mannitol-specific PTS enzymes: IIB component/IIC component 3078859 cmtA 945256 cmtA Escherichia coli str. K-12 substr. MG1655 putative mannitol-specific PTS enzymes: IIB component/IIC component NP_417408.1 3077471 R 511145 CDS NP_417409.1 16130835 945125 complement(3078887..3079330) 1 NC_000913.3 PTS system, mannitol-specific enzyme II component, cryptic; putative mannitol-specific enzyme IIA component of PTS 3079330 cmtB 945125 cmtB Escherichia coli str. K-12 substr. MG1655 putative mannitol-specific enzyme IIA component of PTS NP_417409.1 3078887 R 511145 CDS YP_026188.1 49176286 947420 complement(3079644..3081635) 1 NC_000913.3 transketolase 1 isozyme; transketolase 1, thiamine triphosphate-binding 3081635 tktA 947420 tktA Escherichia coli str. K-12 substr. MG1655 transketolase 1, thiamine triphosphate-binding YP_026188.1 3079644 R 511145 CDS NP_417411.2 90111514 945173 3081913..3082671 1 NC_000913.3 Phe-Phe periplasmic metalloprotease, OM lipoprotein; low salt-inducible; heat shock protein that binds Era 3082671 loiP 945173 loiP Escherichia coli str. K-12 substr. MG1655 Phe-Phe periplasmic metalloprotease, OM lipoprotein; low salt-inducible; heat shock protein that binds Era NP_417411.2 3081913 D 511145 CDS NP_417412.1 16130838 947715 complement(3082877..3083797) 1 NC_000913.3 agmatinase 3083797 speB 947715 speB Escherichia coli str. K-12 substr. MG1655 agmatinase NP_417412.1 3082877 R 511145 CDS NP_417413.1 16130839 947432 complement(3083935..3085911) 1 NC_000913.3 biosynthetic arginine decarboxylase; biosynthetic arginine decarboxylase, PLP-binding 3085911 speA 947432 speA Escherichia coli str. K-12 substr. MG1655 biosynthetic arginine decarboxylase, PLP-binding NP_417413.1 3083935 R 511145 CDS NP_417414.2 145698307 947433 complement(3085920..3086051) 1 NC_000913.3 uncharacterized protein 3086051 yqgB 947433 yqgB Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_417414.2 3085920 R 511145 CDS NP_417415.1 16130841 945052 3086187..3086402 1 NC_000913.3 uncharacterized protein 3086402 yqgC 945052 yqgC Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_417415.1 3086187 D 511145 CDS NP_417417.1 16130843 945389 3086706..3087860 1 NC_000913.3 methionine adenosyltransferase 1 (AdoMet synthetase); methyl and propylamine donor, corepressor of met genes; S-adenosylmethionine synthetase 3087860 metK 945389 metK Escherichia coli str. K-12 substr. MG1655 S-adenosylmethionine synthetase NP_417417.1 3086706 D 511145 CDS NP_417418.1 16130844 947434 3088284..3089678 1 NC_000913.3 galactose-proton symport of transport system; D-galactose transporter 3089678 galP 947434 galP Escherichia coli str. K-12 substr. MG1655 D-galactose transporter NP_417418.1 3088284 D 511145 CDS NP_417419.1 16130845 947443 3089755..3090252 1 NC_000913.3 Zn-dependent metalloprotease-related protein 3090252 yggI 947443 yggI Escherichia coli str. K-12 substr. MG1655 Zn-dependent metalloprotease-related protein NP_417419.1 3089755 D 511145 CDS NP_417420.1 16130846 949092 3090347..3091054 1 NC_000913.3 DNA-specific endonuclease I 3091054 endA 949092 endA Escherichia coli str. K-12 substr. MG1655 DNA-specific endonuclease I NP_417420.1 3090347 D 511145 CDS NP_417421.4 90111515 945816 3091134..3091865 1 NC_000913.3 16S rRNA m(3)U1498 methyltransferase, SAM-dependent 3091865 rsmE 945816 rsmE Escherichia coli str. K-12 substr. MG1655 16S rRNA m(3)U1498 methyltransferase, SAM-dependent NP_417421.4 3091134 D 511145 CDS NP_417422.1 16130848 947445 3091878..3092828 1 NC_000913.3 glutathione synthetase 3092828 gshB 947445 gshB Escherichia coli str. K-12 substr. MG1655 glutathione synthetase NP_417422.1 3091878 D 511145 CDS NP_417423.4 90111516 947442 3092937..3093500 1 NC_000913.3 uncharacterized protein 3093500 yqgE 947442 yqgE Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_417423.4 3092937 D 511145 CDS NP_417424.1 16130850 947439 3093500..3093916 1 NC_000913.3 putative Holliday junction resolvase 3093916 yqgF 947439 yqgF Escherichia coli str. K-12 substr. MG1655 putative Holliday junction resolvase NP_417424.1 3093500 D 511145 CDS NP_417425.2 90111517 947430 complement(3094100..3095080) 1 NC_000913.3 putative protein transport; putative PilT family AAA+ ATPase 3095080 yggR 947430 yggR Escherichia coli str. K-12 substr. MG1655 putative PilT family AAA+ ATPase NP_417425.2 3094100 R 511145 CDS NP_417426.1 16130852 947423 3095098..3095802 1 NC_000913.3 UPF0001 family protein, PLP-binding 3095802 yggS 947423 yggS Escherichia coli str. K-12 substr. MG1655 UPF0001 family protein, PLP-binding NP_417426.1 3095098 D 511145 CDS NP_417427.1 16130853 947421 3095820..3096386 1 NC_000913.3 conserved hypothetical integral membrane protein; putative inner membrane protein; compensates for loss in K+ uptake 3096386 yggT 947421 yggT Escherichia coli str. K-12 substr. MG1655 putative inner membrane protein; compensates for loss in K+ uptake NP_417427.1 3095820 D 511145 CDS NP_417428.2 90111518 947424 3096383..3096673 1 NC_000913.3 UPF0235 family protein 3096673 yggU 947424 yggU Escherichia coli str. K-12 substr. MG1655 UPF0235 family protein NP_417428.2 3096383 D 511145 CDS NP_417429.1 16130855 947429 3096681..3097274 1 NC_000913.3 putative ribosomal protein; dITP/XTP pyrophosphatase 3097274 rdgB 947429 rdgB Escherichia coli str. K-12 substr. MG1655 dITP/XTP pyrophosphatase NP_417429.1 3096681 D 511145 CDS NP_417430.1 16130856 947446 3097267..3098403 1 NC_000913.3 putative oxidase; HemN family putative oxidoreductase 3098403 yggW 947446 yggW Escherichia coli str. K-12 substr. MG1655 HemN family putative oxidoreductase NP_417430.1 3097267 D 511145 CDS NP_417431.1 16130857 947455 complement(3098558..3099565) 1 NC_000913.3 putative alpha helix chain; DUF1202 family putative secreted protein 3099565 yggM 947455 yggM Escherichia coli str. K-12 substr. MG1655 DUF1202 family putative secreted protein NP_417431.1 3098558 R 511145 CDS NP_417432.1 16130858 947454 complement(3099682..3100728) 1 NC_000913.3 periplasmic L-asparaginase 2 3100728 ansB 947454 ansB Escherichia coli str. K-12 substr. MG1655 periplasmic L-asparaginase 2 NP_417432.1 3099682 R 511145 CDS NP_417433.1 16130859 947453 complement(3100904..3101623) 1 NC_000913.3 DUF2884 family putative periplasmic protein 3101623 yggN 947453 yggN Escherichia coli str. K-12 substr. MG1655 DUF2884 family putative periplasmic protein NP_417433.1 3100904 R 511145 CDS NP_417434.4 90111519 947449 complement(3101807..3102133) 1 NC_000913.3 DUF469 family protein 3102133 yggL 947449 yggL Escherichia coli str. K-12 substr. MG1655 DUF469 family protein NP_417434.4 3101807 R 511145 CDS NP_417435.1 16130861 947448 complement(3102133..3102852) 1 NC_000913.3 tRNA m(7)G46 methyltransferase, SAM-dependent 3102852 trmI 947448 trmI Escherichia coli str. K-12 substr. MG1655 tRNA m(7)G46 methyltransferase, SAM-dependent NP_417435.1 3102133 R 511145 CDS NP_417436.1 16130862 947447 3103013..3104065 1 NC_000913.3 adenine glycosylase; G.C --> T.A transversions; adenine DNA glycosylase 3104065 mutY 947447 mutY Escherichia coli str. K-12 substr. MG1655 adenine DNA glycosylase NP_417436.1 3103013 D 511145 CDS NP_417437.1 16130863 947461 3104093..3104368 1 NC_000913.3 protein that protects iron-sulfur proteins against oxidative damage 3104368 yggX 947461 yggX Escherichia coli str. K-12 substr. MG1655 protein that protects iron-sulfur proteins against oxidative damage NP_417437.1 3104093 D 511145 CDS NP_417438.2 90111520 945428 3104433..3105512 1 NC_000913.3 membrane-bound lytic murein transglycosylase C 3105512 mltC 945428 mltC Escherichia coli str. K-12 substr. MG1655 membrane-bound lytic murein transglycosylase C NP_417438.2 3104433 D 511145 CDS NP_417439.4 90111521 946282 3105714..3106970 1 NC_000913.3 transport of nucleosides, permease protein; nucleoside transporter 3106970 nupG 946282 nupG Escherichia coli str. K-12 substr. MG1655 nucleoside transporter NP_417439.4 3105714 D 511145 CDS NP_417440.4 90111522 947457 complement(3107020..3109155) 1 NC_000913.3 ornithine decarboxylase isozyme; ornithine decarboxylase, constitutive 3109155 speC 947457 speC Escherichia coli str. K-12 substr. MG1655 ornithine decarboxylase, constitutive NP_417440.4 3107020 R 511145 CDS NP_417441.1 16130867 947462 3109553..3110260 1 NC_000913.3 putative transport protein; DUF554 family putative inner membrane protein 3110260 yqgA 947462 yqgA Escherichia coli str. K-12 substr. MG1655 DUF554 family putative inner membrane protein NP_417441.1 3109553 D 511145 CDS NP_417442.1 16130868 947025 complement(3110590..3111126) 1 NC_000913.3 putative secretion pathway protein; putative membrane-anchored secretion pathway M-type protein 3111126 yghD 947025 yghD Escherichia coli str. K-12 substr. MG1655 putative membrane-anchored secretion pathway M-type protein NP_417442.1 3110590 R 511145 CDS b2969 945897 complement(3111128..3112090) 1 NC_000913.3 pseudogene, secretion pathway protein, L-type protein homology; putative general secretion pathway for protein export (GSP); <NULL_VALUE> 3112090 yghE 945897 yghE Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 3111128 R 511145 CDS b2970 947469 complement(3112093..3112941) 1 NC_000913.3 pseudogene, secretion pathway protein, C-type protein homology;putative transport; Not classified; putative general secretion pathway for protein export (GSP); <NULL_VALUE> 3112941 yghF 947469 yghF Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 3112093 R 511145 CDS NP_417445.1 16130871 947470 complement(3113067..3113477) 1 NC_000913.3 secretin (GspDbeta) OM localization lipoprotein pilotin 3113477 yghG 947470 yghG Escherichia coli str. K-12 substr. MG1655 secretin (GspDbeta) OM localization lipoprotein pilotin NP_417445.1 3113067 R 511145 CDS NP_417446.4 90111523 947467 complement(3113543..3114352) 1 NC_000913.3 bifunctional prepilin leader peptidase/ methylase 3114352 pppA 947467 pppA Escherichia coli str. K-12 substr. MG1655 bifunctional prepilin leader peptidase/ methylase NP_417446.4 3113543 R 511145 CDS YP_026189.1 49176293 2847716 complement(3114550..3119112) 1 NC_000913.3 putative lipoprotein; DUF4092 family putative lipoprotein peptidase 3119112 yghJ 2847716 yghJ Escherichia coli str. K-12 substr. MG1655 DUF4092 family putative lipoprotein peptidase YP_026189.1 3114550 R 511145 CDS NP_417449.1 16130875 947259 complement(3119597..3121279) 1 NC_000913.3 putative permease; glycolate transporter 3121279 glcA 947259 glcA Escherichia coli str. K-12 substr. MG1655 glycolate transporter NP_417449.1 3119597 R 511145 CDS NP_417450.1 16130876 948857 complement(3121634..3123805) 1 NC_000913.3 malate synthase G 3123805 glcB 948857 glcB Escherichia coli str. K-12 substr. MG1655 malate synthase G NP_417450.1 3121634 R 511145 CDS NP_417451.1 16130877 947473 complement(3123827..3124231) 1 NC_000913.3 DUF336 family protein 3124231 glcG 947473 glcG Escherichia coli str. K-12 substr. MG1655 DUF336 family protein NP_417451.1 3123827 R 511145 CDS YP_026190.1 49176294 2847717 complement(3124236..3125459) 1 NC_000913.3 glycolate oxidase 4Fe-4S iron-sulfur cluster subunit 3125459 glcF 2847717 glcF Escherichia coli str. K-12 substr. MG1655 glycolate oxidase 4Fe-4S iron-sulfur cluster subunit YP_026190.1 3124236 R 511145 CDS YP_026191.1 49176295 2847718 complement(3125470..3126522) 1 NC_000913.3 glycolate oxidase iron-sulfur subunit; glycolate oxidase FAD binding subunit 3126522 glcE 2847718 glcE Escherichia coli str. K-12 substr. MG1655 glycolate oxidase FAD binding subunit YP_026191.1 3125470 R 511145 CDS NP_417453.1 16130879 947353 complement(3126522..3128021) 1 NC_000913.3 glycolate oxidase subunit D; glycolate oxidase subunit, FAD-linked 3128021 glcD 947353 glcD Escherichia coli str. K-12 substr. MG1655 glycolate oxidase subunit, FAD-linked NP_417453.1 3126522 R 511145 CDS NP_417454.1 16130880 947466 3128272..3129036 1 NC_000913.3 transcriptional activator for glc operon; glycolate-inducible glc operon transcriptional repressor; autorepressor 3129036 glcC 947466 glcC Escherichia coli str. K-12 substr. MG1655 glycolate-inducible glc operon transcriptional repressor; autorepressor NP_417454.1 3128272 D 511145 CDS b2981 947701 complement(3129043..3130143) 1 NC_000913.3 pseudogene, DNA-binding transcriptional regulator homology; <NULL_VALUE> 3130143 yghO 947701 yghO Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 3129043 R 511145 CDS NP_417456.1 16130882 947516 3130178..3131194 1 NC_000913.3 IS5 transposase and trans-activator 3131194 insH1 947516 insH1 Escherichia coli str. K-12 substr. MG1655 IS5 transposase and trans-activator NP_417456.1 3130178 D 511145 CDS YP_026192.1 49176296 947716 complement(3131341..3132408) 1 NC_000913.3 putative inner membrane polysaccharide flippase 3132408 yghQ 947716 yghQ Escherichia coli str. K-12 substr. MG1655 putative inner membrane polysaccharide flippase YP_026192.1 3131341 R 511145 CDS NP_417458.1 16130884 947310 complement(3132454..3133212) 1 NC_000913.3 putative ATP-binding protein 3133212 yghR 947310 yghR Escherichia coli str. K-12 substr. MG1655 putative ATP-binding protein NP_417458.1 3132454 R 511145 CDS NP_417459.1 16130885 947476 complement(3133244..3133957) 1 NC_000913.3 putative ATP-binding protein 3133957 yghS 947476 yghS Escherichia coli str. K-12 substr. MG1655 putative ATP-binding protein NP_417459.1 3133244 R 511145 CDS NP_417460.1 16130886 947477 3134131..3134823 1 NC_000913.3 putative ATP-binding protein 3134823 yghT 947477 yghT Escherichia coli str. K-12 substr. MG1655 putative ATP-binding protein NP_417460.1 3134131 D 511145 CDS NP_417461.1 16130887 947475 complement(3134872..3136371) 1 NC_000913.3 low-affinity phosphate transport; phosphate transporter 3136371 pitB 947475 pitB Escherichia coli str. K-12 substr. MG1655 phosphate transporter NP_417461.1 3134872 R 511145 CDS NP_417462.1 16130888 947474 complement(3136663..3138522) 1 NC_000913.3 glutathionylspermidine synthetase/amidase; fused glutathionylspermidine amidase/glutathionylspermidine synthetase 3138522 gss 947474 gss Escherichia coli str. K-12 substr. MG1655 fused glutathionylspermidine amidase/glutathionylspermidine synthetase NP_417462.1 3136663 R 511145 CDS NP_417463.4 90111524 947472 3138727..3139593 1 NC_000913.3 putative S-transferase 3139593 yghU 947472 yghU Escherichia coli str. K-12 substr. MG1655 putative S-transferase NP_417463.4 3138727 D 511145 CDS NP_417464.1 16130890 948020 complement(3139716..3139964) 1 NC_000913.3 hydrogenase-2 operon protein: may effect maturation of large subunit of hydrogenase-2; hydrogenase 2 accessory protein 3139964 hybG 948020 hybG Escherichia coli str. K-12 substr. MG1655 hydrogenase 2 accessory protein NP_417464.1 3139716 R 511145 CDS NP_417465.1 16130891 948004 complement(3139977..3140318) 1 NC_000913.3 may modulate levels of hydrogenease-2; protein involved with the maturation of hydrogenases 1 and 2 3140318 hybF 948004 hybF Escherichia coli str. K-12 substr. MG1655 protein involved with the maturation of hydrogenases 1 and 2 NP_417465.1 3139977 R 511145 CDS NP_417466.1 16130892 947483 complement(3140311..3140799) 1 NC_000913.3 member of hyb operon; hydrogenase 2-specific chaperone 3140799 hybE 947483 hybE Escherichia coli str. K-12 substr. MG1655 hydrogenase 2-specific chaperone NP_417466.1 3140311 R 511145 CDS NP_417467.1 16130893 948982 complement(3140792..3141286) 1 NC_000913.3 probable processing element for hydrogenase-2; maturation protease for hydrogenase 2 3141286 hybD 948982 hybD Escherichia coli str. K-12 substr. MG1655 maturation protease for hydrogenase 2 NP_417467.1 3140792 R 511145 CDS NP_417468.1 16130894 945182 complement(3141286..3142989) 1 NC_000913.3 probable large subunit, hydrogenase-2; hydrogenase 2, large subunit 3142989 hybC 945182 hybC Escherichia coli str. K-12 substr. MG1655 hydrogenase 2, large subunit NP_417468.1 3141286 R 511145 CDS NP_417469.1 16130895 948615 complement(3142986..3144164) 1 NC_000913.3 probable cytochrome Ni/Fe component of hydrogenase-2; putative hydrogenase 2 cytochrome b type component 3144164 hybB 948615 hybB Escherichia coli str. K-12 substr. MG1655 putative hydrogenase 2 cytochrome b type component NP_417469.1 3142986 R 511145 CDS NP_417470.1 16130896 944842 complement(3144154..3145140) 1 NC_000913.3 hydrogenase-2 small subunit; hydrogenase 2 4Fe-4S ferredoxin-type component 3145140 hybA 944842 hybA Escherichia coli str. K-12 substr. MG1655 hydrogenase 2 4Fe-4S ferredoxin-type component NP_417470.1 3144154 R 511145 CDS NP_417471.1 16130897 945902 complement(3145143..3146261) 1 NC_000913.3 hydrogenase 2, small subunit 3146261 hybO 945902 hybO Escherichia coli str. K-12 substr. MG1655 hydrogenase 2, small subunit NP_417471.1 3145143 R 511145 CDS NP_417472.1 16130898 947485 complement(3146450..3146737) 1 NC_000913.3 DUF2623 family protein 3146737 yghW 947485 yghW Escherichia coli str. K-12 substr. MG1655 DUF2623 family protein NP_417472.1 3146450 R 511145 CDS b4658 2847694 complement(join(3146856..3147272,3147272..3147691)) 1 NC_000913.3 pseudogene, dienlactone hydrolase family; <NULL_VALUE> 3147691 yghX 2847694 yghX Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 3146856 R 511145 CDS NP_417474.1 16130899 947480 3147897..3148937 1 NC_000913.3 putative reductase; L-glyceraldehyde 3-phosphate reductase 3148937 gpr 947480 gpr Escherichia coli str. K-12 substr. MG1655 L-glyceraldehyde 3-phosphate reductase NP_417474.1 3147897 D 511145 CDS NP_417475.1 16130900 947479 complement(3148977..3149471) 1 NC_000913.3 UPF0114 family putative inner membrane protein 3149471 yqhA 947479 yqhA Escherichia coli str. K-12 substr. MG1655 UPF0114 family putative inner membrane protein NP_417475.1 3148977 R 511145 CDS NP_417476.1 16130901 947478 3149662..3150546 1 NC_000913.3 putative oxidoreductase 3150546 yghA 947478 yghA Escherichia coli str. K-12 substr. MG1655 putative oxidoreductase NP_417476.1 3149662 D 511145 CDS NP_417478.1 16130903 946345 complement(3150818..3151243) 1 NC_000913.3 uptake of enterochelin; tonB-dependent uptake of B colicins; membrane spanning protein in TonB-ExbB-ExbD complex 3151243 exbD 946345 exbD Escherichia coli str. K-12 substr. MG1655 membrane spanning protein in TonB-ExbB-ExbD complex NP_417478.1 3150818 R 511145 CDS NP_417479.1 16130904 945420 complement(3151250..3151984) 1 NC_000913.3 uptake of enterochelin; tonB-dependent uptake of B colicins; membrane spanning protein in TonB-ExbB-ExbD complex 3151984 exbB 945420 exbB Escherichia coli str. K-12 substr. MG1655 membrane spanning protein in TonB-ExbB-ExbD complex NP_417479.1 3151250 R 511145 CDS NP_417481.1 16130906 946240 3152236..3153423 1 NC_000913.3 cystathionine beta-lyase (beta-cystathionase); cystathionine beta-lyase, PLP-dependent 3153423 metC 946240 metC Escherichia coli str. K-12 substr. MG1655 cystathionine beta-lyase, PLP-dependent NP_417481.1 3152236 D 511145 CDS NP_417482.1 16130907 947490 3153563..3154222 1 NC_000913.3 general envelope maintenance protein; DedA family inner membrane protein 3154222 yghB 947490 yghB Escherichia coli str. K-12 substr. MG1655 general envelope maintenance protein; DedA family inner membrane protein NP_417482.1 3153563 D 511145 CDS NP_417483.2 90111526 947491 complement(3154262..3155218) 1 NC_000913.3 putative ARAC-type regulatory protein; transcriptional activator of yqhD 3155218 yqhC 947491 yqhC Escherichia coli str. K-12 substr. MG1655 transcriptional activator of yqhD NP_417483.2 3154262 R 511145 CDS NP_417484.1 16130909 947493 3155355..3156518 1 NC_000913.3 putative oxidoreductase; aldehyde reductase, NADPH-dependent 3156518 yqhD 947493 yqhD Escherichia coli str. K-12 substr. MG1655 aldehyde reductase, NADPH-dependent NP_417484.1 3155355 D 511145 CDS NP_417485.4 90111527 947495 3156623..3157450 1 NC_000913.3 2,5-diketo-D-gluconate reductase A 3157450 dkgA 947495 dkgA Escherichia coli str. K-12 substr. MG1655 2,5-diketo-D-gluconate reductase A NP_417485.4 3156623 D 511145 CDS YP_026195.1 49176301 945919 3157650..3158576 1 NC_000913.3 DUF3828 family putative periplasmic protein 3158576 yqhG 945919 yqhG Escherichia coli str. K-12 substr. MG1655 DUF3828 family putative periplasmic protein YP_026195.1 3157650 D 511145 CDS NP_417487.1 16130912 946832 3158627..3158884 1 NC_000913.3 outer membrane lipoprotein, Lpp paralog 3158884 yqhH 946832 yqhH Escherichia coli str. K-12 substr. MG1655 outer membrane lipoprotein, Lpp paralog NP_417487.1 3158627 D 511145 CDS YP_026196.1 49176302 948963 complement(3158927..3161146) 1 NC_000913.3 Radical SAM superfamily protein 3161146 ygiQ 948963 ygiQ Escherichia coli str. K-12 substr. MG1655 Radical SAM superfamily protein YP_026196.1 3158927 R 511145 CDS NP_417489.1 16130913 944982 complement(3161257..3162669) 1 NC_000913.3 suppressor of ftsI; septal ring component that protects the divisome from stress; multicopy suppressor of ftsI(Ts) 3162669 ftsP 944982 ftsP Escherichia coli str. K-12 substr. MG1655 septal ring component that protects the divisome from stress; multicopy suppressor of ftsI(Ts) NP_417489.1 3161257 R 511145 CDS NP_417490.1 16130914 947496 complement(3162744..3163481) 1 NC_000913.3 1-acyl-sn-glycerol-3-phosphate acyltransferase 3163481 plsC 947496 plsC Escherichia coli str. K-12 substr. MG1655 1-acyl-sn-glycerol-3-phosphate acyltransferase NP_417490.1 3162744 R 511145 CDS NP_417491.1 16130915 947499 complement(3163715..3165973) 1 NC_000913.3 DNA topoisomerase IV subunit A; DNA topoisomerase IV, subunit A 3165973 parC 947499 parC Escherichia coli str. K-12 substr. MG1655 DNA topoisomerase IV, subunit A NP_417491.1 3163715 R 511145 CDS NP_417492.1 16130916 947140 complement(3166111..3167718) 1 NC_000913.3 putative transport periplasmic protein; putative inner membrane ABC superfamily transporter permease 3167718 ygiS 947140 ygiS Escherichia coli str. K-12 substr. MG1655 putative inner membrane ABC superfamily transporter permease NP_417492.1 3166111 R 511145 CDS NP_417493.1 16130917 945814 complement(3167851..3168246) 1 NC_000913.3 antitoxin for MqsR toxin; transcriptional repressor 3168246 mqsA 945814 mqsA Escherichia coli str. K-12 substr. MG1655 antitoxin for MqsR toxin; transcriptional repressor NP_417493.1 3167851 R 511145 CDS NP_417494.1 16130918 947500 complement(3168248..3168544) 1 NC_000913.3 GCU-specific mRNA interferase toxin of the MqsR-MqsA toxin-antitoxin system; biofilm/motility regulator; anti-repressor 3168544 mqsR 947500 mqsR Escherichia coli str. K-12 substr. MG1655 GCU-specific mRNA interferase toxin of the MqsR-MqsA toxin-antitoxin system; biofilm/motility regulator; anti-repressor NP_417494.1 3168248 R 511145 CDS YP_026197.1 49176303 945805 complement(3168749..3169231) 1 NC_000913.3 transcriptional repressor for mcbR biofilm gene 3169231 ygiV 945805 ygiV Escherichia coli str. K-12 substr. MG1655 transcriptional repressor for mcbR biofilm gene YP_026197.1 3168749 R 511145 CDS NP_417496.1 16130920 946051 complement(3169284..3169676) 1 NC_000913.3 hydrogen peroxide and cadmium resistance periplasmic protein; stress-induced OB-fold protein 3169676 ygiW 946051 ygiW Escherichia coli str. K-12 substr. MG1655 hydrogen peroxide and cadmium resistance periplasmic protein; stress-induced OB-fold protein NP_417496.1 3169284 R 511145 CDS NP_417497.1 16130921 945369 3169828..3170487 1 NC_000913.3 putative 2-component transcriptional regulator; quorum sensing DNA-binding response regulator in two-component regulatory system with QseC 3170487 qseB 945369 qseB Escherichia coli str. K-12 substr. MG1655 quorum sensing DNA-binding response regulator in two-component regulatory system with QseC NP_417497.1 3169828 D 511145 CDS NP_417498.1 16130922 947174 3170484..3171833 1 NC_000913.3 putative 2-component sensor protein; quorum sensing sensory histidine kinase in two-component regulatory system with QseB 3171833 qseC 947174 qseC Escherichia coli str. K-12 substr. MG1655 quorum sensing sensory histidine kinase in two-component regulatory system with QseB NP_417498.1 3170484 D 511145 CDS NP_417499.1 16130923 946450 complement(3171879..3172211) 1 NC_000913.3 inner membrane protein 3172211 ygiZ 946450 ygiZ Escherichia coli str. K-12 substr. MG1655 inner membrane protein NP_417499.1 3171879 R 511145 CDS NP_417500.1 16130924 947512 3172530..3173111 1 NC_000913.3 modulator of drug activity B; NADPH quinone reductase 3173111 mdaB 947512 mdaB Escherichia coli str. K-12 substr. MG1655 NADPH quinone reductase NP_417500.1 3172530 D 511145 CDS NP_417501.1 16130925 947506 3173142..3173456 1 NC_000913.3 quinol monooxygenase 3173456 ygiN 947506 ygiN Escherichia coli str. K-12 substr. MG1655 quinol monooxygenase NP_417501.1 3173142 D 511145 CDS NP_417502.1 16130926 947501 complement(3173504..3175396) 1 NC_000913.3 DNA topoisomerase IV subunit B; DNA topoisomerase IV, subunit B 3175396 parE 947501 parE Escherichia coli str. K-12 substr. MG1655 DNA topoisomerase IV, subunit B NP_417502.1 3173504 R 511145 CDS NP_417503.1 16130927 947488 complement(3175425..3176006) 1 NC_000913.3 acyl CoA esterase 3176006 yqiA 947488 yqiA Escherichia coli str. K-12 substr. MG1655 acyl CoA esterase NP_417503.1 3175425 R 511145 CDS NP_417504.1 16130928 947515 complement(3176006..3176833) 1 NC_000913.3 3',5' cAMP phosphodiesterase 3176833 cpdA 947515 cpdA Escherichia coli str. K-12 substr. MG1655 3',5' cAMP phosphodiesterase NP_417504.1 3176006 R 511145 CDS NP_417505.1 16130929 947518 complement(3176858..3177280) 1 NC_000913.3 putative enzyme; DUF1249 protein YqiB 3177280 yqiB 947518 yqiB Escherichia coli str. K-12 substr. MG1655 DUF1249 protein YqiB NP_417505.1 3176858 R 511145 CDS NP_417506.1 16130930 947519 complement(3177281..3177910) 1 NC_000913.3 ADP-ribose pyrophosphatase 3177910 nudF 947519 nudF Escherichia coli str. K-12 substr. MG1655 ADP-ribose pyrophosphatase NP_417506.1 3177281 R 511145 CDS NP_417507.2 90111528 947521 3178115..3179596 1 NC_000913.3 outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes; transport channel 3179596 tolC 947521 tolC Escherichia coli str. K-12 substr. MG1655 transport channel NP_417507.2 3178115 D 511145 CDS NP_417509.3 145698308 945086 3179744..3180415 1 NC_000913.3 DUF1190 family protein 3180415 ygiB 945086 ygiB Escherichia coli str. K-12 substr. MG1655 DUF1190 family protein NP_417509.3 3179744 D 511145 CDS NP_417510.1 16130934 947249 3180421..3181581 1 NC_000913.3 putative synthetase/amidase; ATP-Grasp family ATPase 3181581 ygiC 947249 ygiC Escherichia coli str. K-12 substr. MG1655 ATP-Grasp family ATPase NP_417510.1 3180421 D 511145 CDS NP_417511.2 226524747 946447 complement(3181619..3182407) 1 NC_000913.3 4,5- DOPA-extradiol-dioxygenase 3182407 ygiD 946447 ygiD Escherichia coli str. K-12 substr. MG1655 4,5- DOPA-extradiol-dioxygenase NP_417511.2 3181619 R 511145 CDS NP_417512.1 16130936 947035 3182550..3183323 1 NC_000913.3 zinc transporter 3183323 zupT 947035 zupT Escherichia coli str. K-12 substr. MG1655 zinc transporter NP_417512.1 3182550 D 511145 CDS NP_417513.1 16130937 947526 complement(3183813..3184466) 1 NC_000913.3 3,4 dihydroxy-2-butanone-4-phosphate synthase; 3,4-dihydroxy-2-butanone-4-phosphate synthase 3184466 ribB 947526 ribB Escherichia coli str. K-12 substr. MG1655 3,4-dihydroxy-2-butanone-4-phosphate synthase NP_417513.1 3183813 R 511145 CDS NP_417514.4 90111530 947524 3184840..3185130 1 NC_000913.3 BMFP family putative fusogenic protein 3185130 yqiC 947524 yqiC Escherichia coli str. K-12 substr. MG1655 BMFP family putative fusogenic protein NP_417514.4 3184840 D 511145 CDS NP_417515.1 16130939 947522 3185414..3185965 1 NC_000913.3 putative fimbrial-like protein; putative fimbrial-like adhesin protein 3185965 ygiL 947522 ygiL Escherichia coli str. K-12 substr. MG1655 putative fimbrial-like adhesin protein NP_417515.1 3185414 D 511145 CDS b3046 947529 join(3186061..3186089,3187421..3189865) 1 NC_000913.3 pseudogene; fimbrial export usher family;putative membrane; Not classified; putative membrane protein; <NULL_VALUE> 3189865 yqiG 947529 yqiG Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 3186061 D 511145 CDS NP_417516.3 145698309 947520 3186187..3186552 1 NC_000913.3 IS2 repressor TnpA 3186552 insC1 947520 insC1 Escherichia coli str. K-12 substr. MG1655 IS2 repressor TnpA NP_417516.3 3186187 D 511145 CDS NP_417517.1 16130941 947517 3186510..3187415 1 NC_000913.3 IS2 transposase TnpB 3187415 insD1 947517 insD1 Escherichia coli str. K-12 substr. MG1655 IS2 transposase TnpB NP_417517.1 3186510 D 511145 CDS NP_417519.4 90111532 947531 3189881..3190630 1 NC_000913.3 putative membrane protein; putative periplasmic pilin chaperone 3190630 yqiH 947531 yqiH Escherichia coli str. K-12 substr. MG1655 putative periplasmic pilin chaperone NP_417519.4 3189881 D 511145 CDS NP_417520.1 16130944 947535 3190632..3191696 1 NC_000913.3 fimbrial protein 3191696 yqiI 947535 yqiI Escherichia coli str. K-12 substr. MG1655 fimbrial protein NP_417520.1 3190632 D 511145 CDS NP_417521.1 16130945 947533 complement(3191739..3191939) 1 NC_000913.3 glycogen biosynthesis, rpoS dependent; motility and biofilm regulator 3191939 glgS 947533 glgS Escherichia coli str. K-12 substr. MG1655 motility and biofilm regulator NP_417521.1 3191739 R 511145 CDS NP_417522.1 16130946 947530 3192208..3192837 1 NC_000913.3 putative oxidoreductase; DUF1449 family inner membrane protein 3192837 yqiJ 947530 yqiJ Escherichia coli str. K-12 substr. MG1655 DUF1449 family inner membrane protein NP_417522.1 3192208 D 511145 CDS NP_417523.1 16130947 947537 3192864..3194525 1 NC_000913.3 putative membrane protein; PHB family membrane protein, function unknown 3194525 yqiK 947537 yqiK Escherichia coli str. K-12 substr. MG1655 PHB family membrane protein, function unknown NP_417523.1 3192864 D 511145 CDS YP_002791256.1 226524748 7751628 3194766..3194825 1 NC_000913.3 toxic membrane protein 3194825 ibsD 7751628 ibsD Escherichia coli str. K-12 substr. MG1655 toxic membrane protein YP_002791256.1 3194766 D 511145 CDS YP_002791257.1 226524749 7751629 3195141..3195200 1 NC_000913.3 toxic membrane protein 3195200 ibsE 7751629 ibsE Escherichia coli str. K-12 substr. MG1655 toxic membrane protein YP_002791257.1 3195141 D 511145 CDS NP_417524.1 16130948 947548 complement(3195320..3196753) 1 NC_000913.3 fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase 3196753 hldE 947548 hldE Escherichia coli str. K-12 substr. MG1655 fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase NP_417524.1 3195320 R 511145 CDS NP_417525.1 16130949 947552 complement(3196801..3199641) 1 NC_000913.3 adenylylating enzyme for glutamine synthetase; fused deadenylyltransferase/adenylyltransferase for glutamine synthetase 3199641 glnE 947552 glnE Escherichia coli str. K-12 substr. MG1655 fused deadenylyltransferase/adenylyltransferase for glutamine synthetase NP_417525.1 3196801 R 511145 CDS NP_417526.1 16130950 947554 complement(3199664..3200965) 1 NC_000913.3 inorganic triphosphatase 3200965 ygiF 947554 ygiF Escherichia coli str. K-12 substr. MG1655 inorganic triphosphatase NP_417526.1 3199664 R 511145 CDS NP_417527.1 16130951 947555 3201207..3201827 1 NC_000913.3 SH3 domain protein 3201827 ygiM 947555 ygiM Escherichia coli str. K-12 substr. MG1655 SH3 domain protein NP_417527.1 3201207 D 511145 CDS NP_417528.1 16130952 947553 3201891..3203129 1 NC_000913.3 tRNA nucleotidyl transferase; fused tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase and phosphatase 3203129 cca 947553 cca Escherichia coli str. K-12 substr. MG1655 fused tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase and phosphatase NP_417528.1 3201891 D 511145 CDS NP_417529.1 16130953 947551 complement(3203310..3204131) 1 NC_000913.3 bacitracin resistance; possibly phosphorylates undecaprenol; undecaprenyl pyrophosphate phosphatase 3204131 bacA 947551 bacA Escherichia coli str. K-12 substr. MG1655 undecaprenyl pyrophosphate phosphatase NP_417529.1 3203310 R 511145 CDS NP_417530.2 90111533 947544 complement(3204221..3204589) 1 NC_000913.3 putative kinase; bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase 3204589 folB 947544 folB Escherichia coli str. K-12 substr. MG1655 bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase NP_417530.2 3204221 R 511145 CDS NP_417531.1 16130955 947561 3204694..3205311 1 NC_000913.3 putative glycerol-3-phosphate acyltransferase 3205311 plsY 947561 plsY Escherichia coli str. K-12 substr. MG1655 putative glycerol-3-phosphate acyltransferase NP_417531.1 3204694 D 511145 CDS NP_417532.1 16130956 947562 complement(3205324..3206256) 1 NC_000913.3 putative transcriptional regulator LYSR-type; transcriptional activator of ttdABT 3206256 ttdR 947562 ttdR Escherichia coli str. K-12 substr. MG1655 transcriptional activator of ttdABT NP_417532.1 3205324 R 511145 CDS NP_417533.1 16130957 947565 3206463..3207374 1 NC_000913.3 L-tartrate dehydratase, subunit A; L-tartrate dehydratase, alpha subunit 3207374 ttdA 947565 ttdA Escherichia coli str. K-12 substr. MG1655 L-tartrate dehydratase, alpha subunit NP_417533.1 3206463 D 511145 CDS NP_417534.1 16130958 947568 3207371..3207976 1 NC_000913.3 L-tartrate dehydratase, subunit B; L-tartrate dehydratase, beta subunit 3207976 ttdB 947568 ttdB Escherichia coli str. K-12 substr. MG1655 L-tartrate dehydratase, beta subunit NP_417534.1 3207371 D 511145 CDS NP_417535.1 16130959 947576 3208024..3209487 1 NC_000913.3 L-tartrate/succinate antiporte 3209487 ttdT 947576 ttdT Escherichia coli str. K-12 substr. MG1655 L-tartrate/succinate antiporte NP_417535.1 3208024 D 511145 CDS NP_417536.1 16130960 947578 complement(3209530..3210543) 1 NC_000913.3 putative O-sialoglycoprotein endopeptidase; tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein; glycation binding protein 3210543 tsaD 947578 tsaD Escherichia coli str. K-12 substr. MG1655 tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein; glycation binding protein NP_417536.1 3209530 R 511145 CDS NP_417537.1 16130961 947577 3210781..3210996 1 NC_000913.3 30S ribosomal subunit protein S21 3210996 rpsU 947577 rpsU Escherichia coli str. K-12 substr. MG1655 30S ribosomal subunit protein S21 NP_417537.1 3210781 D 511145 CDS NP_417538.1 16130962 947570 3211107..3212852 1 NC_000913.3 DNA biosynthesis; DNA primase; DNA primase 3212852 dnaG 947570 dnaG Escherichia coli str. K-12 substr. MG1655 DNA primase NP_417538.1 3211107 D 511145 CDS NP_417539.1 16130963 947567 3213047..3214888 1 NC_000913.3 RNA polymerase, sigma(70) factor; regulation of proteins induced at high temperatures; RNA polymerase, sigma 70 (sigma D) factor 3214888 rpoD 947567 rpoD Escherichia coli str. K-12 substr. MG1655 RNA polymerase, sigma 70 (sigma D) factor NP_417539.1 3213047 D 511145 CDS NP_417540.1 16130964 947560 complement(3214967..3215473) 1 NC_000913.3 G/U mismatch-specific DNA glycosylase; xanthine DNA glycosylase 3215473 mug 947560 mug Escherichia coli str. K-12 substr. MG1655 G/U mismatch-specific DNA glycosylase; xanthine DNA glycosylase NP_417540.1 3214967 R 511145 CDS NP_417541.1 16130965 947582 complement(3215727..3216491) 1 NC_000913.3 putative siderophore interacting protein 3216491 yqjH 947582 yqjH Escherichia coli str. K-12 substr. MG1655 putative siderophore interacting protein NP_417541.1 3215727 R 511145 CDS NP_417542.1 16130966 947584 3216779..3217402 1 NC_000913.3 PadR family putative transcriptional regulator 3217402 yqjI 947584 yqjI Escherichia coli str. K-12 substr. MG1655 PadR family putative transcriptional regulator NP_417542.1 3216779 D 511145 CDS NP_417543.1 16130967 945301 complement(3217556..3219076) 1 NC_000913.3 aerotaxis sensor receptor, flavoprotein; fused signal transducer for aerotaxis sensory component/methyl accepting chemotaxis component 3219076 aer 945301 aer Escherichia coli str. K-12 substr. MG1655 fused signal transducer for aerotaxis sensory component/methyl accepting chemotaxis component NP_417543.1 3217556 R 511145 CDS NP_417544.5 145698310 947120 3219494..3220873 1 NC_000913.3 probable ornithine aminotransferase; putrescine:2-oxoglutaric acid aminotransferase, PLP-dependent 3220873 patA 947120 patA Escherichia coli str. K-12 substr. MG1655 putrescine:2-oxoglutaric acid aminotransferase, PLP-dependent NP_417544.5 3219494 D 511145 CDS NP_417545.1 16130969 946251 complement(3220915..3221247) 1 NC_000913.3 putative tRNA synthetase; putative tRNA binding protein; putative tRNA corner chaperone 3221247 ygjH 946251 ygjH Escherichia coli str. K-12 substr. MG1655 putative tRNA binding protein; putative tRNA corner chaperone NP_417545.1 3220915 R 511145 CDS NP_417546.1 16130970 947586 3221466..3222449 1 NC_000913.3 regulator of ebg operon; transcriptional repressor 3222449 ebgR 947586 ebgR Escherichia coli str. K-12 substr. MG1655 transcriptional repressor NP_417546.1 3221466 D 511145 CDS YP_026199.1 49176308 947583 3222633..3225725 1 NC_000913.3 evolved beta-D-galactosidase, alpha subunit; cryptic gene; evolved beta-D-galactosidase, alpha subunit 3225725 ebgA 947583 ebgA Escherichia coli str. K-12 substr. MG1655 evolved beta-D-galactosidase, alpha subunit YP_026199.1 3222633 D 511145 CDS NP_417548.1 16130972 947581 3225722..3226171 1 NC_000913.3 evolved beta-D-galactosidase, beta subunit; cryptic gene; evolved beta-D-galactosidase, beta subunit; cupin superfamily 3226171 ebgC 947581 ebgC Escherichia coli str. K-12 substr. MG1655 evolved beta-D-galactosidase, beta subunit; cupin superfamily NP_417548.1 3225722 D 511145 CDS YP_026200.1 49176309 947579 3226234..3227667 1 NC_000913.3 putative oxidoreductase; putative transporter 3227667 ygjI 947579 ygjI Escherichia coli str. K-12 substr. MG1655 putative transporter YP_026200.1 3226234 D 511145 CDS NP_417550.1 16130974 947597 3227801..3228871 1 NC_000913.3 putative periplasmic protein 3228871 ygjJ 947597 ygjJ Escherichia coli str. K-12 substr. MG1655 putative periplasmic protein NP_417550.1 3227801 D 511145 CDS NP_417551.1 16130975 947596 3228888..3231239 1 NC_000913.3 putative isomerase; alpha-glucosidase 3231239 ygjK 947596 ygjK Escherichia coli str. K-12 substr. MG1655 alpha-glucosidase NP_417551.1 3228888 D 511145 CDS NP_417552.1 16130976 947594 3231665..3233683 1 NC_000913.3 2,4-dienoyl-CoA reductase, NADH and FMN-linked 3233683 fadH 947594 fadH Escherichia coli str. K-12 substr. MG1655 2,4-dienoyl-CoA reductase, NADH and FMN-linked NP_417552.1 3231665 D 511145 CDS NP_417553.1 16130977 947593 complement(3233728..3234144) 1 NC_000913.3 antitoxinof the HigB-HigA toxin-antitoxin system 3234144 higA 947593 higA Escherichia coli str. K-12 substr. MG1655 antitoxinof the HigB-HigA toxin-antitoxin system NP_417553.1 3233728 R 511145 CDS NP_417554.1 16130978 947591 complement(3234141..3234455) 1 NC_000913.3 mRNA interferase toxin of the HigB-HigA toxin-antitoxin system 3234455 higB 947591 higB Escherichia coli str. K-12 substr. MG1655 mRNA interferase toxin of the HigB-HigA toxin-antitoxin system NP_417554.1 3234141 R 511145 CDS NP_417555.4 90111535 947589 complement(3234739..3235875) 1 NC_000913.3 putative enzyme; 23S rRNA m(2)G1835 methyltransferase, SAM-dependent 3235875 rlmG 947589 rlmG Escherichia coli str. K-12 substr. MG1655 23S rRNA m(2)G1835 methyltransferase, SAM-dependent NP_417555.4 3234739 R 511145 CDS NP_417556.2 90111536 947650 3235960..3236463 1 NC_000913.3 putative metal dependent hydrolase 3236463 ygjP 947650 ygjP Escherichia coli str. K-12 substr. MG1655 putative metal dependent hydrolase NP_417556.2 3235960 D 511145 CDS NP_417557.1 16130981 947598 3236540..3237232 1 NC_000913.3 DUF218 superfamily protein 3237232 ygjQ 947598 ygjQ Escherichia coli str. K-12 substr. MG1655 DUF218 superfamily protein NP_417557.1 3236540 D 511145 CDS NP_417558.2 145698311 947600 3237311..3238297 1 NC_000913.3 putative NAD(P)-dependent dehydrogenase 3238297 ygjR 947600 ygjR Escherichia coli str. K-12 substr. MG1655 putative NAD(P)-dependent dehydrogenase NP_417558.2 3237311 D 511145 CDS YP_026201.1 49176311 947607 3238580..3239545 1 NC_000913.3 putative transport protein; putative membrane-bound redox modulator 3239545 alx 947607 alx Escherichia coli str. K-12 substr. MG1655 putative membrane-bound redox modulator YP_026201.1 3238580 D 511145 CDS NP_417560.1 16130984 947605 3239944..3241188 1 NC_000913.3 putative transport protein; sodium:serine/threonine symporter 3241188 sstT 947605 sstT Escherichia coli str. K-12 substr. MG1655 sodium:serine/threonine symporter NP_417560.1 3239944 D 511145 CDS NP_417561.1 16130985 947604 complement(3241193..3241744) 1 NC_000913.3 Imp-YgjV family inner membrane protein 3241744 ygjV 947604 ygjV Escherichia coli str. K-12 substr. MG1655 Imp-YgjV family inner membrane protein NP_417561.1 3241193 R 511145 CDS NP_417562.1 16130986 947603 complement(3241827..3243314) 1 NC_000913.3 altronate hydrolase 3243314 uxaA 947603 uxaA Escherichia coli str. K-12 substr. MG1655 altronate hydrolase NP_417562.1 3241827 R 511145 CDS NP_417563.1 16130987 947599 complement(3243329..3244741) 1 NC_000913.3 uronate isomerase 3244741 uxaC 947599 uxaC Escherichia coli str. K-12 substr. MG1655 uronate isomerase NP_417563.1 3243329 R 511145 CDS NP_417564.1 16130988 947601 3245104..3246522 1 NC_000913.3 transport of hexuronates; hexuronate transporter 3246522 exuT 947601 exuT Escherichia coli str. K-12 substr. MG1655 hexuronate transporter NP_417564.1 3245104 D 511145 CDS NP_417565.2 90111537 947602 3246652..3247428 1 NC_000913.3 negative regulator of exu regulon, exuT, uxaAC, and uxuB; hexuronate regulon transcriptional repressor; autorepressor 3247428 exuR 947602 exuR Escherichia coli str. K-12 substr. MG1655 hexuronate regulon transcriptional repressor; autorepressor NP_417565.2 3246652 D 511145 CDS NP_417566.1 16130990 947643 3247773..3248435 1 NC_000913.3 general envelope maintenance protein; DedA family inner membrane protein 3248435 yqjA 947643 yqjA Escherichia coli str. K-12 substr. MG1655 general envelope maintenance protein; DedA family inner membrane protein NP_417566.1 3247773 D 511145 CDS NP_417567.1 16130991 947619 3248439..3248822 1 NC_000913.3 modulator of EnvZ/OmpR regulon 3248822 mzrA 947619 mzrA Escherichia coli str. K-12 substr. MG1655 modulator of EnvZ/OmpR regulon NP_417567.1 3248439 D 511145 CDS NP_417568.2 90111538 947622 3248969..3249337 1 NC_000913.3 DUF1090 family putative periplasmic protein 3249337 yqjC 947622 yqjC Escherichia coli str. K-12 substr. MG1655 DUF1090 family putative periplasmic protein NP_417568.2 3248969 D 511145 CDS NP_417569.1 16130993 947614 3249375..3249680 1 NC_000913.3 membrane-anchored ribosome-binding protein 3249680 yqjD 947614 yqjD Escherichia coli str. K-12 substr. MG1655 membrane-anchored ribosome-binding protein NP_417569.1 3249375 D 511145 CDS NP_417570.1 16130994 947611 3249683..3250087 1 NC_000913.3 DUF1469 family inner membrane protein 3250087 yqjE 947611 yqjE Escherichia coli str. K-12 substr. MG1655 DUF1469 family inner membrane protein NP_417570.1 3249683 D 511145 CDS NP_417571.1 16130995 947610 3250077..3250376 1 NC_000913.3 uncharacterized protein 3250376 yqjK 947610 yqjK Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_417571.1 3250077 D 511145 CDS NP_417572.2 90111539 947608 3250562..3250954 1 NC_000913.3 putative quinol oxidase subunit 3250954 yqjF 947608 yqjF Escherichia coli str. K-12 substr. MG1655 putative quinol oxidase subunit NP_417572.2 3250562 D 511145 CDS NP_417573.1 16130997 947615 3251024..3252010 1 NC_000913.3 putative transferase; putative S-transferase 3252010 yqjG 947615 yqjG Escherichia coli str. K-12 substr. MG1655 putative S-transferase NP_417573.1 3251024 D 511145 CDS NP_417574.1 16130998 947617 3252304..3252669 1 NC_000913.3 putative cytochrome; DUF805 family inner membrane protein 3252669 yhaH 947617 yhaH Escherichia coli str. K-12 substr. MG1655 DUF805 family inner membrane protein NP_417574.1 3252304 D 511145 CDS NP_417575.1 16130999 947612 3252911..3253267 1 NC_000913.3 putative cytochrome; DUF805 family inner membrane protein 3253267 yhaI 947612 yhaI Escherichia coli str. K-12 substr. MG1655 DUF805 family inner membrane protein NP_417575.1 3252911 D 511145 CDS NP_417576.1 16131000 947621 complement(3253318..3254214) 1 NC_000913.3 putative transcriptional regulator LYSR-type; LysR family putative transcriptional regulator 3254214 yhaJ 947621 yhaJ Escherichia coli str. K-12 substr. MG1655 LysR family putative transcriptional regulator NP_417576.1 3253318 R 511145 CDS NP_417577.1 16131001 947620 3254319..3255020 1 NC_000913.3 redox-sensitive bicupin 3255020 yhaK 947620 yhaK Escherichia coli str. K-12 substr. MG1655 redox-sensitive bicupin NP_417577.1 3254319 D 511145 CDS NP_417578.2 90111540 947618 3255043..3255207 1 NC_000913.3 uncharacterized protein 3255207 yhaL 947618 yhaL Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_417578.2 3255043 D 511145 CDS YP_026202.1 49176312 2847723 complement(3255341..3256651) 1 NC_000913.3 conserved hypothetical protein; putative L-serine dehydratase alpha chain 3256651 yhaM 2847723 yhaM Escherichia coli str. K-12 substr. MG1655 putative L-serine dehydratase alpha chain YP_026202.1 3255341 R 511145 CDS YP_026203.3 145698312 947628 complement(3256679..3258010) 1 NC_000913.3 putative transport system permease protein; putative transporter 3258010 yhaO 947628 yhaO Escherichia coli str. K-12 substr. MG1655 putative transporter YP_026203.3 3256679 R 511145 CDS YP_026204.1 49176314 2847724 complement(3258285..3259649) 1 NC_000913.3 L-serine dehydratase; L-serine dehydratase 3, anaerobic 3259649 tdcG 2847724 tdcG Escherichia coli str. K-12 substr. MG1655 L-serine dehydratase 3, anaerobic YP_026204.1 3258285 R 511145 CDS NP_417583.4 90111542 947624 complement(3259721..3260110) 1 NC_000913.3 putative reactive intermediate deaminase 3260110 tdcF 947624 tdcF Escherichia coli str. K-12 substr. MG1655 putative reactive intermediate deaminase NP_417583.4 3259721 R 511145 CDS YP_026205.1 49176316 947623 complement(3260124..3262418) 1 NC_000913.3 probable formate acetyltransferase 3; pyruvate formate-lyase 4/2-ketobutyrate formate-lyase 3262418 tdcE 947623 tdcE Escherichia coli str. K-12 substr. MG1655 pyruvate formate-lyase 4/2-ketobutyrate formate-lyase YP_026205.1 3260124 R 511145 CDS NP_417585.2 145698313 947635 complement(3262452..3263660) 1 NC_000913.3 propionate kinase/acetate kinase II, anaerobic; propionate kinase/acetate kinase C, anaerobic 3263660 tdcD 947635 tdcD Escherichia coli str. K-12 substr. MG1655 propionate kinase/acetate kinase C, anaerobic NP_417585.2 3262452 R 511145 CDS NP_417586.1 16131009 947629 complement(3263686..3265017) 1 NC_000913.3 anaerobically inducible L-threonine, L-serine permease; L-threonine/L-serine transporter 3265017 tdcC 947629 tdcC Escherichia coli str. K-12 substr. MG1655 L-threonine/L-serine transporter NP_417586.1 3263686 R 511145 CDS NP_417587.1 16131010 947633 complement(3265039..3266028) 1 NC_000913.3 threonine dehydratase, catabolic; L-threonine dehydratase, catabolic 3266028 tdcB 947633 tdcB Escherichia coli str. K-12 substr. MG1655 L-threonine dehydratase, catabolic NP_417587.1 3265039 R 511145 CDS NP_417588.1 16131011 947494 complement(3266127..3267065) 1 NC_000913.3 transcriptional activator of tdc operon; tdc operon transcriptional activator 3267065 tdcA 947494 tdcA Escherichia coli str. K-12 substr. MG1655 tdc operon transcriptional activator NP_417588.1 3266127 R 511145 CDS NP_417589.4 162135908 944907 3267380..3267598 1 NC_000913.3 threonine dehydratase operon activator protein; L-threonine dehydratase operon activator protein 3267598 tdcR 944907 tdcR Escherichia coli str. K-12 substr. MG1655 L-threonine dehydratase operon activator protein NP_417589.4 3267380 D 511145 CDS NP_417590.2 90111544 947705 3267854..3268393 1 NC_000913.3 uncharacterized protein 3268393 yhaB 947705 yhaB Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_417590.2 3267854 D 511145 CDS NP_417591.1 16131014 947557 3268415..3269602 1 NC_000913.3 pentapetide repeats-related protein 3269602 yhaC 947557 yhaC Escherichia coli str. K-12 substr. MG1655 pentapetide repeats-related protein NP_417591.1 3268415 D 511145 CDS NP_417593.4 145698314 947632 complement(3270625..3271770) 1 NC_000913.3 glycerate kinase I 3271770 garK 947632 garK Escherichia coli str. K-12 substr. MG1655 glycerate kinase I NP_417593.4 3270625 R 511145 CDS NP_417594.3 145698315 947631 complement(3271867..3272751) 1 NC_000913.3 tartronate semialdehyde reductase (TSAR); tartronate semialdehyde reductase 3272751 garR 947631 garR Escherichia coli str. K-12 substr. MG1655 tartronate semialdehyde reductase NP_417594.3 3271867 R 511145 CDS NP_417595.1 16131018 947630 complement(3272787..3273557) 1 NC_000913.3 alpha-dehydro-beta-deoxy-D-glucarate aldolase 3273557 garL 947630 garL Escherichia coli str. K-12 substr. MG1655 alpha-dehydro-beta-deoxy-D-glucarate aldolase NP_417595.1 3272787 R 511145 CDS NP_417596.1 16131019 947642 complement(3273573..3274907) 1 NC_000913.3 putative transport protein; putative (D)-galactarate transporter 3274907 garP 947642 garP Escherichia coli str. K-12 substr. MG1655 putative (D)-galactarate transporter NP_417596.1 3273573 R 511145 CDS NP_417597.1 16131020 947641 3275282..3276853 1 NC_000913.3 (D)-galactarate dehydrogenase 3276853 garD 947641 garD Escherichia coli str. K-12 substr. MG1655 (D)-galactarate dehydrogenase NP_417597.1 3275282 D 511145 CDS NP_417598.1 16131021 947639 3277002..3277337 1 NC_000913.3 putative protease; htrA suppressor protein; antitoxin of the SohA(PrlF)-YhaV toxin-antitoxin system 3277337 prlF 947639 prlF Escherichia coli str. K-12 substr. MG1655 antitoxin of the SohA(PrlF)-YhaV toxin-antitoxin system NP_417598.1 3277002 D 511145 CDS NP_417599.1 16131022 947638 3277337..3277801 1 NC_000913.3 toxin of the SohB(PrlF)-YhaV toxin-antitoxin system 3277801 yhaV 947638 yhaV Escherichia coli str. K-12 substr. MG1655 toxin of the SohB(PrlF)-YhaV toxin-antitoxin system NP_417599.1 3277337 D 511145 CDS NP_417600.1 16131023 947636 complement(3277856..3278665) 1 NC_000913.3 putative DEOR-type transcriptional regulator of aga operon; transcriptional repressor of the aga regulon 3278665 agaR 947636 agaR Escherichia coli str. K-12 substr. MG1655 transcriptional repressor of the aga regulon NP_417600.1 3277856 R 511145 CDS NP_417601.1 16131024 947637 3278914..3280194 1 NC_000913.3 putative tagatose 6-phosphate kinase 2; tagatose 6-phosphate aldolase 1, kbaZ subunit 3280194 kbaZ 947637 kbaZ Escherichia coli str. K-12 substr. MG1655 tagatose 6-phosphate aldolase 1, kbaZ subunit NP_417601.1 3278914 D 511145 CDS NP_417602.4 90111546 947648 3280217..3280690 1 NC_000913.3 PTS system, cytoplasmic, N-acetylgalactosamine-specific IIB component 2 (EIIB-AGA); N-acetylgalactosamine-specific enzyme IIB component of PTS 3280690 agaV 947648 agaV Escherichia coli str. K-12 substr. MG1655 N-acetylgalactosamine-specific enzyme IIB component of PTS NP_417602.4 3280217 D 511145 CDS b3134 947647 3280701..3281075 1 NC_000913.3 N-acetylgalactosamine-specific enzyme IIC component of PTS, fragment (pseudogene);enzyme; Central intermediary metabolism: Amino sugars; PTS system N-acetylgalactosameine-specific IIC component 2; <NULL_VALUE> 3281075 agaW 947647 agaW Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 3280701 D 511145 CDS b3135 947646 3281071..3281625 1 NC_000913.3 pseudogene, N-acetylgalactosamine-6-phosphate deacetylase fragment; putative N-acetylgalactosamine-6-phosphate deacetylase; <NULL_VALUE> 3281625 agaA 947646 agaA Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 3281071 D 511145 CDS NP_417605.1 16131028 947645 3281976..3283130 1 NC_000913.3 putative tagatose-6-phosphate aldose/ketose isomerase; tagatose-6-phosphate ketose/aldose isomerase 3283130 agaS 947645 agaS Escherichia coli str. K-12 substr. MG1655 tagatose-6-phosphate ketose/aldose isomerase NP_417605.1 3281976 D 511145 CDS NP_417606.1 16131029 947644 3283143..3284003 1 NC_000913.3 tagatose-bisphosphate aldolase 2; tagatose 6-phosphate aldolase 1, kbaY subunit 3284003 kbaY 947644 kbaY Escherichia coli str. K-12 substr. MG1655 tagatose 6-phosphate aldolase 1, kbaY subunit NP_417606.1 3283143 D 511145 CDS NP_417607.1 16131030 947653 3284170..3284646 1 NC_000913.3 PTS system, cytoplasmic, N-acetylgalactosamine-specific IIB component 1 (EIIB-AGA); N-acetylgalactosamine-specific enzyme IIB component of PTS 3284646 agaB 947653 agaB Escherichia coli str. K-12 substr. MG1655 N-acetylgalactosamine-specific enzyme IIB component of PTS NP_417607.1 3284170 D 511145 CDS NP_417608.1 16131031 947652 3284685..3285488 1 NC_000913.3 PTS system N-acetylgalactosamine-specific IIC component 1; N-acetylgalactosamine-specific enzyme IIC component of PTS 3285488 agaC 947652 agaC Escherichia coli str. K-12 substr. MG1655 N-acetylgalactosamine-specific enzyme IIC component of PTS NP_417608.1 3284685 D 511145 CDS NP_417609.1 16131032 947649 3285478..3286269 1 NC_000913.3 PTS system, N-acetylglucosamine enzyme IID component 1; N-acetylgalactosamine-specific enzyme IID component of PTS 3286269 agaD 947649 agaD Escherichia coli str. K-12 substr. MG1655 N-acetylgalactosamine-specific enzyme IID component of PTS NP_417609.1 3285478 D 511145 CDS NP_417610.1 16131033 947985 3286270..3287025 1 NC_000913.3 putative galactosamine-6-phosphate isomerase; galactosamine-6-phosphate isomerase 3287025 agaI 947985 agaI Escherichia coli str. K-12 substr. MG1655 galactosamine-6-phosphate isomerase NP_417610.1 3286270 D 511145 CDS NP_417611.1 16131034 947658 3287426..3288010 1 NC_000913.3 putative fimbrial-like protein; putative fimbrial-like adhesin protein 3288010 yraH 947658 yraH Escherichia coli str. K-12 substr. MG1655 putative fimbrial-like adhesin protein NP_417611.1 3287426 D 511145 CDS NP_417612.1 16131035 947657 3288090..3288785 1 NC_000913.3 putative chaperone; putative periplasmic pilin chaperone 3288785 yraI 947657 yraI Escherichia coli str. K-12 substr. MG1655 putative periplasmic pilin chaperone NP_417612.1 3288090 D 511145 CDS NP_417613.1 16131036 947656 3288814..3291330 1 NC_000913.3 putative outer membrane protein 3291330 yraJ 947656 yraJ Escherichia coli str. K-12 substr. MG1655 putative outer membrane protein NP_417613.1 3288814 D 511145 CDS NP_417614.1 16131037 947654 3291341..3292432 1 NC_000913.3 putative fimbrial protein; putative fimbrial-like adhesin protein 3292432 yraK 947654 yraK Escherichia coli str. K-12 substr. MG1655 putative fimbrial-like adhesin protein NP_417614.1 3291341 D 511145 CDS NP_417615.1 16131038 947664 complement(3292475..3293335) 1 NC_000913.3 16S rRNA C1402 2'-O-ribose methyltransferase, SAM-dependent 3293335 rsmI 947664 rsmI Escherichia coli str. K-12 substr. MG1655 16S rRNA C1402 2'-O-ribose methyltransferase, SAM-dependent NP_417615.1 3292475 R 511145 CDS NP_417616.1 16131039 947663 3293400..3295436 1 NC_000913.3 putative glycosylase; OM lipoprotein stimulator of MrcA transpeptidase 3295436 lpoA 947663 lpoA Escherichia coli str. K-12 substr. MG1655 OM lipoprotein stimulator of MrcA transpeptidase NP_417616.1 3293400 D 511145 CDS NP_417617.1 16131040 947662 3295394..3295789 1 NC_000913.3 UPF0102 family protein 3295789 yraN 947662 yraN Escherichia coli str. K-12 substr. MG1655 UPF0102 family protein NP_417617.1 3295394 D 511145 CDS NP_417618.1 16131041 947661 3295809..3296399 1 NC_000913.3 DnaA initiator-associating factor for replication initiation 3296399 diaA 947661 diaA Escherichia coli str. K-12 substr. MG1655 DnaA initiator-associating factor for replication initiation NP_417618.1 3295809 D 511145 CDS NP_417619.1 16131042 947659 3296409..3296984 1 NC_000913.3 putative periplasmic protein; outer membrane lipoprotein 3296984 yraP 947659 yraP Escherichia coli str. K-12 substr. MG1655 outer membrane lipoprotein NP_417619.1 3296409 D 511145 CDS NP_417620.1 16131043 947668 complement(3297098..3298138) 1 NC_000913.3 putative inner membrane permease 3298138 yraQ 947668 yraQ Escherichia coli str. K-12 substr. MG1655 putative inner membrane permease NP_417620.1 3297098 R 511145 CDS NP_417621.2 90111547 947667 complement(3298211..3298846) 1 NC_000913.3 putative nucleoside-diphosphate-sugar epimerase 3298846 yraR 947667 yraR Escherichia coli str. K-12 substr. MG1655 putative nucleoside-diphosphate-sugar epimerase NP_417621.2 3298211 R 511145 CDS NP_417622.2 90111548 947666 3298974..3299492 1 NC_000913.3 stress-resistance protein 3299492 yhbO 947666 yhbO Escherichia coli str. K-12 substr. MG1655 stress-resistance protein NP_417622.2 3298974 D 511145 CDS NP_417623.1 16131046 947665 complement(3299472..3299915) 1 NC_000913.3 UPF0306 family protein 3299915 yhbP 947665 yhbP Escherichia coli str. K-12 substr. MG1655 UPF0306 family protein NP_417623.1 3299472 R 511145 CDS NP_417624.1 16131047 947671 3299966..3300268 1 NC_000913.3 GIY-YIG nuclease superfamily protein 3300268 yhbQ 947671 yhbQ Escherichia coli str. K-12 substr. MG1655 GIY-YIG nuclease superfamily protein NP_417624.1 3299966 D 511145 CDS NP_417625.1 16131048 947670 complement(3300255..3300758) 1 NC_000913.3 putative acyl-CoA transferase 3300758 yhbS 947670 yhbS Escherichia coli str. K-12 substr. MG1655 putative acyl-CoA transferase NP_417625.1 3300255 R 511145 CDS NP_417626.1 16131049 947669 complement(3300752..3301276) 1 NC_000913.3 SCP-2 sterol transfer family protein 3301276 yhbT 947669 yhbT Escherichia coli str. K-12 substr. MG1655 SCP-2 sterol transfer family protein NP_417626.1 3300752 R 511145 CDS NP_417627.1 16131050 949115 3301485..3302480 1 NC_000913.3 putative collagenase; U32 peptidase family protein 3302480 yhbU 949115 yhbU Escherichia coli str. K-12 substr. MG1655 U32 peptidase family protein NP_417627.1 3301485 D 511145 CDS NP_417628.2 90111549 949117 3302489..3303367 1 NC_000913.3 U32 peptidase family protein 3303367 yhbV 949117 yhbV Escherichia coli str. K-12 substr. MG1655 U32 peptidase family protein NP_417628.2 3302489 D 511145 CDS NP_417629.1 16131052 947677 3303448..3304455 1 NC_000913.3 putative enzyme; putative luciferase-like monooxygenase 3304455 yhbW 947677 yhbW Escherichia coli str. K-12 substr. MG1655 putative luciferase-like monooxygenase NP_417629.1 3303448 D 511145 CDS NP_417630.1 16131053 947675 complement(3304573..3305817) 1 NC_000913.3 tryptophan-specific transport protein; tryptophan transporter of high affinity 3305817 mtr 947675 mtr Escherichia coli str. K-12 substr. MG1655 tryptophan transporter of high affinity NP_417630.1 3304573 R 511145 CDS NP_417631.2 90111550 947674 complement(3305971..3307860) 1 NC_000913.3 inducible ATP-independent RNA helicase; ATP-dependent RNA helicase 3307860 deaD 947674 deaD Escherichia coli str. K-12 substr. MG1655 ATP-dependent RNA helicase NP_417631.2 3305971 R 511145 CDS YP_002791258.1 226524750 7751619 complement(3307853..3307933) 1 NC_000913.3 uncharacterized protein 3307933 yrbN 7751619 yrbN Escherichia coli str. K-12 substr. MG1655 uncharacterized protein YP_002791258.1 3307853 R 511145 CDS NP_417632.1 16131055 947673 complement(3308040..3308924) 1 NC_000913.3 lipoprotein involved in osmotic sensitivity and filamentation 3308924 nlpI 947673 nlpI Escherichia coli str. K-12 substr. MG1655 lipoprotein involved in osmotic sensitivity and filamentation NP_417632.1 3308040 R 511145 CDS NP_417633.4 145698316 947672 complement(3309033..3311168) 1 NC_000913.3 polynucleotide phosphorylase; cytidylate kinase activity; polynucleotide phosphorylase/polyadenylase 3311168 pnp 947672 pnp Escherichia coli str. K-12 substr. MG1655 polynucleotide phosphorylase/polyadenylase NP_417633.4 3309033 R 511145 CDS NP_417634.1 16131057 947686 complement(3311415..3311684) 1 NC_000913.3 30S ribosomal subunit protein S15 3311684 rpsO 947686 rpsO Escherichia coli str. K-12 substr. MG1655 30S ribosomal subunit protein S15 NP_417634.1 3311415 R 511145 CDS NP_417635.1 16131058 947687 complement(3311833..3312777) 1 NC_000913.3 tRNA pseudouridine 5S synthase; tRNA pseudouridine synthase B: tRNA pseudouridine(55) synthase and putative tmRNA pseudouridine(342) synthase 3312777 truB 947687 truB Escherichia coli str. K-12 substr. MG1655 tRNA pseudouridine synthase B: tRNA pseudouridine(55) synthase and putative tmRNA pseudouridine(342) synthase NP_417635.1 3311833 R 511145 CDS NP_417636.1 16131059 947685 complement(3312777..3313178) 1 NC_000913.3 ribosome-binding factor A; 30s ribosome binding factor 3313178 rbfA 947685 rbfA Escherichia coli str. K-12 substr. MG1655 30s ribosome binding factor NP_417636.1 3312777 R 511145 CDS NP_417637.1 16131060 947684 complement(3313342..3316014) 1 NC_000913.3 protein chain initiation factor IF-2; translation initiation factor IF-2 3316014 infB 947684 infB Escherichia coli str. K-12 substr. MG1655 translation initiation factor IF-2 NP_417637.1 3313342 R 511145 CDS NP_417638.1 16131061 947682 complement(3316039..3317526) 1 NC_000913.3 transcription pausing; L factor; transcription termination/antitermination L factor 3317526 nusA 947682 nusA Escherichia coli str. K-12 substr. MG1655 transcription termination/antitermination L factor NP_417638.1 3316039 R 511145 CDS NP_417639.6 226524751 947680 complement(3317554..3318006) 1 NC_000913.3 ribosome maturation factor for 30S subunits 3318006 rimP 947680 rimP Escherichia coli str. K-12 substr. MG1655 ribosome maturation factor for 30S subunits NP_417639.6 3317554 R 511145 CDS NP_417640.1 16131063 947590 3318637..3319980 1 NC_000913.3 argininosuccinate synthetase 3319980 argG 947590 argG Escherichia coli str. K-12 substr. MG1655 argininosuccinate synthetase NP_417640.1 3318637 D 511145 CDS NP_417641.4 90111552 947711 complement(3319988..3321613) 1 NC_000913.3 putative alkaline phosphatase I; putative EptAB family phosphoethanolamine transferase, inner membrane protein 3321613 yhbX 947711 yhbX Escherichia coli str. K-12 substr. MG1655 putative EptAB family phosphoethanolamine transferase, inner membrane protein NP_417641.4 3319988 R 511145 CDS NP_417642.1 16131065 947720 complement(3322173..3322505) 1 NC_000913.3 protein export - membrane protein; preprotein translocase membrane subunit 3322505 secG 947720 secG Escherichia coli str. K-12 substr. MG1655 preprotein translocase membrane subunit NP_417642.1 3322173 R 511145 CDS NP_417643.1 16131066 947692 complement(3322733..3324070) 1 NC_000913.3 phosphoglucosamine mutase 3324070 glmM 947692 glmM Escherichia coli str. K-12 substr. MG1655 phosphoglucosamine mutase NP_417643.1 3322733 R 511145 CDS NP_417644.4 90111553 947691 complement(3324063..3324911) 1 NC_000913.3 7,8-dihydropteroate synthase 3324911 folP 947691 folP Escherichia coli str. K-12 substr. MG1655 7,8-dihydropteroate synthase NP_417644.4 3324063 R 511145 CDS NP_417645.1 16131068 947690 complement(3325001..3326935) 1 NC_000913.3 protease, ATP-dependent zinc-metallo 3326935 ftsH 947690 ftsH Escherichia coli str. K-12 substr. MG1655 protease, ATP-dependent zinc-metallo NP_417645.1 3325001 R 511145 CDS NP_417646.1 16131069 947689 complement(3327035..3327664) 1 NC_000913.3 23S rRNA U2552 2'-O-ribose methyltransferase, SAM-dependent 3327664 rlmE 947689 rlmE Escherichia coli str. K-12 substr. MG1655 23S rRNA U2552 2'-O-ribose methyltransferase, SAM-dependent NP_417646.1 3327035 R 511145 CDS NP_417647.1 16131070 947688 3327790..3328083 1 NC_000913.3 RNA binding protein associated with pre-50S ribosomal subunits 3328083 yhbY 947688 yhbY Escherichia coli str. K-12 substr. MG1655 RNA binding protein associated with pre-50S ribosomal subunits NP_417647.1 3327790 D 511145 CDS NP_417648.4 90111554 947696 complement(3328239..3328715) 1 NC_000913.3 transcription elongation factor: cleaves 3' nucleotide of paused mRNA; transcript cleavage factor 3328715 greA 947696 greA Escherichia coli str. K-12 substr. MG1655 transcript cleavage factor NP_417648.4 3328239 R 511145 CDS NP_417649.1 16131072 947693 3328963..3330396 1 NC_000913.3 D-alanyl-D-alanine carboxypeptidase, fraction B; penicillin-binding protein 4; D-alanyl-D-alanine carboxypeptidase 3330396 dacB 947693 dacB Escherichia coli str. K-12 substr. MG1655 D-alanyl-D-alanine carboxypeptidase NP_417649.1 3328963 D 511145 CDS NP_417650.1 16131073 947694 complement(3330582..3331754) 1 NC_000913.3 putative GTP-binding factor; GTPase involved in cell partioning and DNA repair 3331754 obgE 947694 obgE Escherichia coli str. K-12 substr. MG1655 GTPase involved in cell partioning and DNA repair NP_417650.1 3330582 R 511145 CDS NP_417651.1 16131074 947699 complement(3331770..3332735) 1 NC_000913.3 EamA family inner membrane putative transporter 3332735 yhbE 947699 yhbE Escherichia coli str. K-12 substr. MG1655 EamA family inner membrane putative transporter NP_417651.1 3331770 R 511145 CDS NP_417652.1 16131075 945190 complement(3332862..3333119) 1 NC_000913.3 50S ribosomal subunit protein L27 3333119 rpmA 945190 rpmA Escherichia coli str. K-12 substr. MG1655 50S ribosomal subunit protein L27 NP_417652.1 3332862 R 511145 CDS NP_417653.1 16131076 949057 complement(3333140..3333451) 1 NC_000913.3 50S ribosomal subunit protein L21 3333451 rplU 949057 rplU Escherichia coli str. K-12 substr. MG1655 50S ribosomal subunit protein L21 NP_417653.1 3333140 R 511145 CDS NP_417654.1 16131077 947364 3333710..3334681 1 NC_000913.3 octaprenyl diphosphate synthase 3334681 ispB 947364 ispB Escherichia coli str. K-12 substr. MG1655 octaprenyl diphosphate synthase NP_417654.1 3333710 D 511145 CDS NP_417655.1 16131078 947960 3334909..3335187 1 NC_000913.3 regulatory factor of maltose metabolism; similar to Ner repressor protein of phage Mu; malPQ operon transcriptional activator 3335187 sfsB 947960 sfsB Escherichia coli str. K-12 substr. MG1655 malPQ operon transcriptional activator NP_417655.1 3334909 D 511145 CDS NP_417656.1 16131079 947703 complement(3335235..3336494) 1 NC_000913.3 first step in murein biosynthesis;UDP-N-glucosamine 1-carboxyvinyltransferase; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 3336494 murA 947703 murA Escherichia coli str. K-12 substr. MG1655 UDP-N-acetylglucosamine 1-carboxyvinyltransferase NP_417656.1 3335235 R 511145 CDS NP_417657.2 90111555 947958 complement(3336549..3336803) 1 NC_000913.3 acid stress protein; putative transcriptional regulator, BolA family 3336803 ibaG 947958 ibaG Escherichia coli str. K-12 substr. MG1655 acid stress protein; putative transcriptional regulator, BolA family NP_417657.2 3336549 R 511145 CDS NP_417658.4 90111556 947954 complement(3336963..3337256) 1 NC_000913.3 ABC transporter maintaining OM lipid asymmetry, cytoplasmic STAS component 3337256 mlaB 947954 mlaB Escherichia coli str. K-12 substr. MG1655 ABC transporter maintaining OM lipid asymmetry, cytoplasmic STAS component NP_417658.4 3336963 R 511145 CDS NP_417659.1 16131082 947710 complement(3337256..3337891) 1 NC_000913.3 ABC transporter maintaining OM lipid asymmetry, periplasmic binding protein 3337891 mlaC 947710 mlaC Escherichia coli str. K-12 substr. MG1655 ABC transporter maintaining OM lipid asymmetry, periplasmic binding protein NP_417659.1 3337256 R 511145 CDS NP_417660.1 16131083 947712 complement(3337910..3338461) 1 NC_000913.3 ABC transporter maintaining OM lipid asymmetry, anchored periplasmic binding protein 3338461 mlaD 947712 mlaD Escherichia coli str. K-12 substr. MG1655 ABC transporter maintaining OM lipid asymmetry, anchored periplasmic binding protein NP_417660.1 3337910 R 511145 CDS NP_417661.1 16131084 947732 complement(3338466..3339248) 1 NC_000913.3 ABC transporter maintaining OM lipid asymmetry, inner membrane permease protein 3339248 mlaE 947732 mlaE Escherichia coli str. K-12 substr. MG1655 ABC transporter maintaining OM lipid asymmetry, inner membrane permease protein NP_417661.1 3338466 R 511145 CDS NP_417662.1 16131085 947729 complement(3339256..3340065) 1 NC_000913.3 putative ATP-binding component of a transport system; ABC transporter maintaining OM lipid asymmetry, ATP-binding protein 3340065 mlaF 947729 mlaF Escherichia coli str. K-12 substr. MG1655 ABC transporter maintaining OM lipid asymmetry, ATP-binding protein NP_417662.1 3339256 R 511145 CDS NP_417663.1 16131086 947730 3340275..3341252 1 NC_000913.3 putative calcium/sodium:proton antiporter 3341252 yrbG 947730 yrbG Escherichia coli str. K-12 substr. MG1655 putative calcium/sodium:proton antiporter NP_417663.1 3340275 D 511145 CDS NP_417664.1 16131087 947734 3341266..3342252 1 NC_000913.3 putative isomerase; D-arabinose 5-phosphate isomerase 3342252 kdsD 947734 kdsD Escherichia coli str. K-12 substr. MG1655 D-arabinose 5-phosphate isomerase NP_417664.1 3341266 D 511145 CDS NP_417665.1 16131088 947717 3342273..3342839 1 NC_000913.3 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 3342839 kdsC 947717 kdsC Escherichia coli str. K-12 substr. MG1655 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase NP_417665.1 3342273 D 511145 CDS NP_417666.1 16131089 947722 3342836..3343411 1 NC_000913.3 lipopolysaccharide export, IM-tethered periplasmic protein of the LptBFGC export complex 3343411 lptC 947722 lptC Escherichia coli str. K-12 substr. MG1655 lipopolysaccharide export, IM-tethered periplasmic protein of the LptBFGC export complex NP_417666.1 3342836 D 511145 CDS NP_417667.1 16131090 947920 3343380..3343937 1 NC_000913.3 periplasmic LPS-binding protein 3343937 lptA 947920 lptA Escherichia coli str. K-12 substr. MG1655 periplasmic LPS-binding protein NP_417667.1 3343380 D 511145 CDS NP_417668.1 16131091 947725 3343944..3344669 1 NC_000913.3 putative ATP-binding component of a transport system; lipopolysaccharide export ABC transporter ATP-binding protein of the LptBFGC export complex 3344669 lptB 947725 lptB Escherichia coli str. K-12 substr. MG1655 lipopolysaccharide export ABC transporter ATP-binding protein of the LptBFGC export complex NP_417668.1 3343944 D 511145 CDS NP_417669.1 16131092 947714 3344717..3346150 1 NC_000913.3 RNA polymerase, sigma(54 or 60) factor; nitrogen and fermentation regulation; RNA polymerase, sigma 54 (sigma N) factor 3346150 rpoN 947714 rpoN Escherichia coli str. K-12 substr. MG1655 RNA polymerase, sigma 54 (sigma N) factor NP_417669.1 3344717 D 511145 CDS NP_417670.1 16131093 947718 3346173..3346460 1 NC_000913.3 probable sigma-54 modulation protein; ribosome hibernation promoting factor HPF; stabilizes 70S dimers (100S) 3346460 hpf 947718 hpf Escherichia coli str. K-12 substr. MG1655 ribosome hibernation promoting factor HPF; stabilizes 70S dimers (100S) NP_417670.1 3346173 D 511145 CDS NP_417671.1 16131094 947721 3346578..3347069 1 NC_000913.3 phosphotransferase system enzyme IIA, regulates N metabolism; sugar-specific enzyme IIA component of PTS 3347069 ptsN 947721 ptsN Escherichia coli str. K-12 substr. MG1655 sugar-specific enzyme IIA component of PTS NP_417671.1 3346578 D 511145 CDS NP_417672.1 16131095 947727 3347115..3347969 1 NC_000913.3 adaptor protein RapZ for GlmZ/GlmY sRNA decay; glucosamine-6-phosphate regulated; NTPase 3347969 yhbJ 947727 yhbJ Escherichia coli str. K-12 substr. MG1655 adaptor protein RapZ for GlmZ/GlmY sRNA decay; glucosamine-6-phosphate regulated; NTPase NP_417672.1 3347115 D 511145 CDS NP_417673.1 16131096 947914 3347966..3348238 1 NC_000913.3 phosphocarrier protein HPr-like NPr, nitrogen related, exchanges phosphate with Enzyme I, Hpr; phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) 3348238 npr 947914 npr Escherichia coli str. K-12 substr. MG1655 phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) NP_417673.1 3347966 D 511145 CDS NP_417674.1 16131097 947910 3348452..3349084 1 NC_000913.3 Mg(2+)-starvation-stimulated protein 3349084 yrbL 947910 yrbL Escherichia coli str. K-12 substr. MG1655 Mg(2+)-starvation-stimulated protein NP_417674.1 3348452 D 511145 CDS NP_417675.1 16131098 947728 complement(3349081..3349809) 1 NC_000913.3 putative peptidoglycan enzyme; biosynthetic peptidoglycan transglycosylase 3349809 mtgA 947728 mtgA Escherichia coli str. K-12 substr. MG1655 biosynthetic peptidoglycan transglycosylase NP_417675.1 3349081 R 511145 CDS NP_417676.2 90111557 947903 complement(3349806..3350459) 1 NC_000913.3 sigma cross-reacting protein 27A (SCRP-27A); isoprenoid biosynthesis protein with amidotransferase-like domain 3350459 elbB 947903 elbB Escherichia coli str. K-12 substr. MG1655 isoprenoid biosynthesis protein with amidotransferase-like domain NP_417676.2 3349806 R 511145 CDS YP_026207.1 49176326 947887 complement(3350689..3353025) 1 NC_000913.3 aerobic respiration sensor-response protein; histidine protein kinase/phosphatase, sensor for arcA; aerobic respiration control sensor histidine protein kinase, cognate to two-component response regulators ArcA and RssB 3353025 arcB 947887 arcB Escherichia coli str. K-12 substr. MG1655 aerobic respiration control sensor histidine protein kinase, cognate to two-component response regulators ArcA and RssB YP_026207.1 3350689 R 511145 CDS NP_417678.1 16131101 947733 complement(3353121..3354050) 1 NC_000913.3 putative Fe-S oxidoreductase, Radical SAM superfamily protein 3354050 yhcC 947733 yhcC Escherichia coli str. K-12 substr. MG1655 putative Fe-S oxidoreductase, Radical SAM superfamily protein NP_417678.1 3353121 R 511145 CDS NP_417679.2 308209621 947724 3354725..3359185 1 NC_000913.3 glutamate synthase, large subunit 3359185 gltB 947724 gltB Escherichia coli str. K-12 substr. MG1655 glutamate synthase, large subunit NP_417679.2 3354725 D 511145 CDS NP_417680.1 16131103 947723 3359198..3360616 1 NC_000913.3 glutamate synthase, small subunit; glutamate synthase, 4Fe-4S protein, small subunit 3360616 gltD 947723 gltD Escherichia coli str. K-12 substr. MG1655 glutamate synthase, 4Fe-4S protein, small subunit NP_417680.1 3359198 D 511145 CDS NP_417681.1 16131104 947746 3361176..3361940 1 NC_000913.3 regulator of gltBDF operon, induction of Ntr enzymes; periplasmic protein 3361940 gltF 947746 gltF Escherichia coli str. K-12 substr. MG1655 periplasmic protein NP_417681.1 3361176 D 511145 CDS NP_417682.1 16131105 947741 3362112..3362786 1 NC_000913.3 putative chaperone; putative periplasmic chaperone protein 3362786 yhcA 947741 yhcA Escherichia coli str. K-12 substr. MG1655 putative periplasmic chaperone protein NP_417682.1 3362112 D 511145 CDS NP_417683.1 16131106 947738 3362807..3365188 1 NC_000913.3 putative outer membrane protein; putative outer membrane fimbrial subunit usher protein 3365188 yhcD 947738 yhcD Escherichia coli str. K-12 substr. MG1655 putative outer membrane fimbrial subunit usher protein NP_417683.1 3362807 D 511145 CDS b4569 4056032 join(3365185..3365551,3366751..3366929) 1 NC_000913.3 pseudogene fragment; interrupted by IS5; <NULL_VALUE> 3366929 yhcE 4056032 yhcE Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 3365185 D 511145 CDS NP_417685.1 16131108 947743 complement(3365702..3366718) 1 NC_000913.3 IS5 transposase and trans-activator 3366718 insH1 947743 insH1 Escherichia coli str. K-12 substr. MG1655 IS5 transposase and trans-activator NP_417685.1 3365702 R 511145 CDS NP_417686.1 16131109 947735 3366926..3367642 1 NC_000913.3 putative transcriptional regulator 3367642 yhcF 947735 yhcF Escherichia coli str. K-12 substr. MG1655 putative transcriptional regulator NP_417686.1 3366926 D 511145 CDS NP_417687.1 16131110 947739 3367827..3368954 1 NC_000913.3 DUF1016 family protein in the PD-(D/E)XK nuclease superfamily 3368954 yhcG 947739 yhcG Escherichia coli str. K-12 substr. MG1655 DUF1016 family protein in the PD-(D/E)XK nuclease superfamily NP_417687.1 3367827 D 511145 CDS NP_417688.1 16131111 947750 complement(3369014..3369478) 1 NC_000913.3 DUF386 family protein, cupin superfamily 3369478 yhcH 947750 yhcH Escherichia coli str. K-12 substr. MG1655 DUF386 family protein, cupin superfamily NP_417688.1 3369014 R 511145 CDS NP_417689.4 90111558 947757 complement(3369475..3370350) 1 NC_000913.3 N-acetylmannosamine kinase 3370350 nanK 947757 nanK Escherichia coli str. K-12 substr. MG1655 N-acetylmannosamine kinase NP_417689.4 3369475 R 511145 CDS NP_417690.1 16131113 947745 complement(3370347..3371036) 1 NC_000913.3 putative N-acetylmannosamine-6-P epimerase 3371036 nanE 947745 nanE Escherichia coli str. K-12 substr. MG1655 putative N-acetylmannosamine-6-P epimerase NP_417690.1 3370347 R 511145 CDS NP_417691.4 90111559 947740 complement(3371084..3372574) 1 NC_000913.3 sialic acid transporter 3372574 nanT 947740 nanT Escherichia coli str. K-12 substr. MG1655 sialic acid transporter NP_417691.4 3371084 R 511145 CDS NP_417692.1 16131115 947742 complement(3372683..3373576) 1 NC_000913.3 N-acetylneuraminate lyase (aldolase); catabolism of sialic acid; not K-12?; N-acetylneuraminate lyase 3373576 nanA 947742 nanA Escherichia coli str. K-12 substr. MG1655 N-acetylneuraminate lyase NP_417692.1 3372683 R 511145 CDS NP_417693.3 49176329 945468 complement(3373698..3374489) 1 NC_000913.3 transcriptional repressor of the nan operon, induced by sialic acid 3374489 nanR 945468 nanR Escherichia coli str. K-12 substr. MG1655 transcriptional repressor of the nan operon, induced by sialic acid NP_417693.3 3373698 R 511145 CDS NP_417694.1 16131117 946575 3374869..3376236 1 NC_000913.3 putative transporter 3376236 dcuD 946575 dcuD Escherichia coli str. K-12 substr. MG1655 putative transporter NP_417694.1 3374869 D 511145 CDS NP_417695.1 16131118 944774 complement(3376279..3376776) 1 NC_000913.3 stringent starvation protein B; ClpXP protease specificity enhancing factor 3376776 sspB 944774 sspB Escherichia coli str. K-12 substr. MG1655 ClpXP protease specificity enhancing factor NP_417695.1 3376279 R 511145 CDS NP_417696.1 16131119 944744 complement(3376782..3377420) 1 NC_000913.3 regulator of transcription; stringent starvation protein A; stringent starvation protein A, phage P1 late gene activator, RNAP-associated acid-resistance protein, inactive glutathione S-transferase homolog 3377420 sspA 944744 sspA Escherichia coli str. K-12 substr. MG1655 stringent starvation protein A, phage P1 late gene activator, RNAP-associated acid-resistance protein, inactive glutathione S-transferase homolog NP_417696.1 3376782 R 511145 CDS NP_417697.1 16131120 949000 complement(3377815..3378207) 1 NC_000913.3 30S ribosomal subunit protein S9 3378207 rpsI 949000 rpsI Escherichia coli str. K-12 substr. MG1655 30S ribosomal subunit protein S9 NP_417697.1 3377815 R 511145 CDS NP_417698.1 16131121 947828 complement(3378223..3378651) 1 NC_000913.3 50S ribosomal subunit protein L13 3378651 rplM 947828 rplM Escherichia coli str. K-12 substr. MG1655 50S ribosomal subunit protein L13 NP_417698.1 3378223 R 511145 CDS NP_417699.1 16131122 947821 complement(3378870..3379997) 1 NC_000913.3 putative AFG1-like family P-loop ATPase 3379997 yhcM 947821 yhcM Escherichia coli str. K-12 substr. MG1655 putative AFG1-like family P-loop ATPase NP_417699.1 3378870 R 511145 CDS NP_417700.2 90111560 947815 3380191..3380589 1 NC_000913.3 DUF1043 family inner membrane-anchored protein 3380589 yhcB 947815 yhcB Escherichia coli str. K-12 substr. MG1655 DUF1043 family inner membrane-anchored protein NP_417700.2 3380191 D 511145 CDS NP_417701.1 16131124 947812 3380743..3382110 1 NC_000913.3 serine endoprotease; serine endoprotease, periplasmic 3382110 degQ 947812 degQ Escherichia coli str. K-12 substr. MG1655 serine endoprotease, periplasmic NP_417701.1 3380743 D 511145 CDS NP_417702.1 16131125 947865 3382200..3383267 1 NC_000913.3 protease; serine endoprotease, periplasmic 3383267 degS 947865 degS Escherichia coli str. K-12 substr. MG1655 serine endoprotease, periplasmic NP_417702.1 3382200 D 511145 CDS NP_417703.1 16131126 947854 complement(3383330..3384268) 1 NC_000913.3 malate dehydrogenase; malate dehydrogenase, NAD(P)-binding 3384268 mdh 947854 mdh Escherichia coli str. K-12 substr. MG1655 malate dehydrogenase, NAD(P)-binding NP_417703.1 3383330 R 511145 CDS NP_417704.1 16131127 947861 3384703..3385173 1 NC_000913.3 repressor of arg regulon; cer-mediated site specific recombination; l-arginine-responsive arginine metabolism regulon transcriptional regulator 3385173 argR 947861 argR Escherichia coli str. K-12 substr. MG1655 l-arginine-responsive arginine metabolism regulon transcriptional regulator NP_417704.1 3384703 D 511145 CDS NP_417705.2 90111561 947835 3385538..3385801 1 NC_000913.3 cadmium and peroxide resistance protein, stress-induced 3385801 yhcN 947835 yhcN Escherichia coli str. K-12 substr. MG1655 cadmium and peroxide resistance protein, stress-induced NP_417705.2 3385538 D 511145 CDS NP_417706.1 16131129 947830 complement(3385857..3386129) 1 NC_000913.3 putative barnase inhibitor 3386129 yhcO 947830 yhcO Escherichia coli str. K-12 substr. MG1655 putative barnase inhibitor NP_417706.1 3385857 R 511145 CDS NP_417707.1 16131130 947747 complement(3386221..3388188) 1 NC_000913.3 p-hydroxybenzoic acid efflux system component 3388188 aaeB 947747 aaeB Escherichia coli str. K-12 substr. MG1655 p-hydroxybenzoic acid efflux system component NP_417707.1 3386221 R 511145 CDS NP_417708.1 16131131 947748 complement(3388194..3389126) 1 NC_000913.3 p-hydroxybenzoic acid efflux system component 3389126 aaeA 947748 aaeA Escherichia coli str. K-12 substr. MG1655 p-hydroxybenzoic acid efflux system component NP_417708.1 3388194 R 511145 CDS NP_417709.2 90111562 947751 complement(3389134..3389337) 1 NC_000913.3 DUF1656 family putative inner membrane efflux pump associated protein 3389337 aaeX 947751 aaeX Escherichia coli str. K-12 substr. MG1655 DUF1656 family putative inner membrane efflux pump associated protein NP_417709.2 3389134 R 511145 CDS NP_417710.1 16131133 947760 3389520..3390449 1 NC_000913.3 transcriptional regulator for aaeXAB operon 3390449 aaeR 947760 aaeR Escherichia coli str. K-12 substr. MG1655 transcriptional regulator for aaeXAB operon NP_417710.1 3389520 D 511145 CDS NP_417711.1 16131134 947749 complement(3390583..3392028) 1 NC_000913.3 suppresses inhibitory activity of CsrA; putative peptidase 3392028 tldD 947749 tldD Escherichia coli str. K-12 substr. MG1655 putative peptidase NP_417711.1 3390583 R 511145 CDS YP_026208.1 49176330 2847740 complement(3392458..3396258) 1 NC_000913.3 DUF3971-AsmA2 domains protein 3396258 yhdP 2847740 yhdP Escherichia coli str. K-12 substr. MG1655 DUF3971-AsmA2 domains protein YP_026208.1 3392458 R 511145 CDS NP_417713.2 90111563 947744 complement(3396326..3397795) 1 NC_000913.3 ribonuclease G 3397795 rng 947744 rng Escherichia coli str. K-12 substr. MG1655 ribonuclease G NP_417713.2 3396326 R 511145 CDS NP_417714.1 16131136 947753 complement(3397785..3398378) 1 NC_000913.3 Maf-like protein 3398378 yhdE 947753 yhdE Escherichia coli str. K-12 substr. MG1655 Maf-like protein NP_417714.1 3397785 R 511145 CDS NP_417715.1 16131137 947756 complement(3398387..3398875) 1 NC_000913.3 rod shape-determining protein; cell wall structural complex MreBCD transmembrane component MreD 3398875 mreD 947756 mreD Escherichia coli str. K-12 substr. MG1655 cell wall structural complex MreBCD transmembrane component MreD NP_417715.1 3398387 R 511145 CDS NP_417716.1 16131138 947655 complement(3398875..3399978) 1 NC_000913.3 rod shape-determining protein; cell wall structural complex MreBCD transmembrane component MreC 3399978 mreC 947655 mreC Escherichia coli str. K-12 substr. MG1655 cell wall structural complex MreBCD transmembrane component MreC NP_417716.1 3398875 R 511145 CDS NP_417717.2 90111564 948588 complement(3400044..3401087) 1 NC_000913.3 regulator of ftsI, penicillin binding protein 3, septation function; cell wall structural complex MreBCD, actin-like component MreB 3401087 mreB 948588 mreB Escherichia coli str. K-12 substr. MG1655 cell wall structural complex MreBCD, actin-like component MreB NP_417717.2 3400044 R 511145 CDS NP_417718.1 16131140 947702 complement(3401392..3403332) 1 NC_000913.3 targeting factor for csrBC sRNA degradation 3403332 csrD 947702 csrD Escherichia coli str. K-12 substr. MG1655 targeting factor for csrBC sRNA degradation NP_417718.1 3401392 R 511145 CDS NP_417719.1 16131141 947848 3403484..3404458 1 NC_000913.3 putative dehydrogenase; putative acryloyl-CoA reductase 3404458 acuI 947848 acuI Escherichia coli str. K-12 substr. MG1655 putative acryloyl-CoA reductase NP_417719.1 3403484 D 511145 CDS b4697 7751640 3404495..3404637 1 NC_000913.3 pseudogene, conserved protein; <NULL_VALUE> 3404637 yrdF 7751640 yrdF Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 3404495 D 511145 CDS b4646 5625572 join(3404638..3404733,3404732..3405031) 1 NC_000913.3 pseudogene, yedZ paralog; <NULL_VALUE> 3405031 yrdE 5625572 yrdE Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 3404638 D 511145 CDS NP_417721.1 16131143 947758 3405436..3405906 1 NC_000913.3 acetylCoA carboxylase, BCCP subunit; carrier of biotin; acetyl CoA carboxylase, BCCP subunit 3405906 accB 947758 accB Escherichia coli str. K-12 substr. MG1655 acetyl CoA carboxylase, BCCP subunit NP_417721.1 3405436 D 511145 CDS NP_417722.1 16131144 947761 3405917..3407266 1 NC_000913.3 acetyl CoA carboxylase, biotin carboxylase subunit; acetyl-CoA carboxylase, biotin carboxylase subunit 3407266 accC 947761 accC Escherichia coli str. K-12 substr. MG1655 acetyl-CoA carboxylase, biotin carboxylase subunit NP_417722.1 3405917 D 511145 CDS NP_417723.1 16131145 947762 3407375..3407617 1 NC_000913.3 DUF997 family putative inner membrane protein 3407617 yhdT 947762 yhdT Escherichia coli str. K-12 substr. MG1655 DUF997 family putative inner membrane protein NP_417723.1 3407375 D 511145 CDS NP_417724.4 90111565 947752 3407607..3409058 1 NC_000913.3 sodium/pantothenate symporter; pantothenate:sodium symporter 3409058 panF 947752 panF Escherichia coli str. K-12 substr. MG1655 pantothenate:sodium symporter NP_417724.4 3407607 D 511145 CDS NP_417725.1 16131147 947708 3409070..3409951 1 NC_000913.3 methyltransferase for 50S ribosomal subunit protein L11 3409951 prmA 947708 prmA Escherichia coli str. K-12 substr. MG1655 methyltransferase for 50S ribosomal subunit protein L11 NP_417725.1 3409070 D 511145 CDS NP_417726.1 16131148 947707 3410280..3411245 1 NC_000913.3 putative dehydrogenase; tRNA-dihydrouridine synthase B 3411245 dusB 947707 dusB Escherichia coli str. K-12 substr. MG1655 tRNA-dihydrouridine synthase B NP_417726.1 3410280 D 511145 CDS NP_417727.1 16131149 947697 3411271..3411567 1 NC_000913.3 site-specific DNA inversion stimulation factor; DNA-binding protein; a trans activator for transcription; global DNA-binding transcriptional dual regulator 3411567 fis 947697 fis Escherichia coli str. K-12 substr. MG1655 global DNA-binding transcriptional dual regulator NP_417727.1 3411271 D 511145 CDS NP_417728.4 90111566 947695 3411653..3412537 1 NC_000913.3 putative methyltransferase; DNA adenine methyltransferase, SAM-dependent 3412537 yhdJ 947695 yhdJ Escherichia coli str. K-12 substr. MG1655 DNA adenine methyltransferase, SAM-dependent NP_417728.4 3411653 D 511145 CDS NP_417729.1 16131151 947700 3412621..3412800 1 NC_000913.3 putative membrane protein 3412800 yhdU 947700 yhdU Escherichia coli str. K-12 substr. MG1655 putative membrane protein NP_417729.1 3412621 D 511145 CDS NP_417730.1 16131152 947704 complement(3412803..3413465) 1 NC_000913.3 putative transcriptional regulator; acrAB operon transcriptional repressor 3413465 acrS 947704 acrS Escherichia coli str. K-12 substr. MG1655 acrAB operon transcriptional repressor NP_417730.1 3412803 R 511145 CDS NP_417731.1 16131153 947706 3413864..3415021 1 NC_000913.3 transmembrane protein affects septum formation and cell membrane permeability; cytoplasmic membrane lipoprotein 3415021 acrE 947706 acrE Escherichia coli str. K-12 substr. MG1655 cytoplasmic membrane lipoprotein NP_417731.1 3413864 D 511145 CDS NP_417732.1 16131154 947768 3415033..3418137 1 NC_000913.3 integral transmembrane protein; acridine resistance; multidrug efflux system protein 3418137 acrF 947768 acrF Escherichia coli str. K-12 substr. MG1655 multidrug efflux system protein NP_417732.1 3415033 D 511145 CDS NP_417733.1 16131155 947767 3418390..3418611 1 NC_000913.3 putative outer membrane protein 3418611 yhdV 947767 yhdV Escherichia coli str. K-12 substr. MG1655 putative outer membrane protein NP_417733.1 3418390 D 511145 CDS b3268 947766 join(3419042..3419107,3419107..3420066) 1 NC_000913.3 pseudogene, amino-acid transporter homology;putative transport; Not classified; putative periplasmic binding transport protein; periplasmic-binding component of ABC superfamily; <NULL_VALUE> 3420066 yhdW 947766 yhdW Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 3419042 D 511145 CDS YP_026209.1 49176333 947765 3420134..3421315 1 NC_000913.3 putative transport system permease protein; membrane component of ABC superfamily; putative amino-acid transporter subunit 3421315 yhdX 947765 yhdX Escherichia coli str. K-12 substr. MG1655 putative amino-acid transporter subunit YP_026209.1 3420134 D 511145 CDS NP_417736.2 90111567 947764 3421325..3422428 1 NC_000913.3 putative transport system permease protein; membrane component of ABC superfamily; putative amino-acid transporter subunit 3422428 yhdY 947764 yhdY Escherichia coli str. K-12 substr. MG1655 putative amino-acid transporter subunit NP_417736.2 3421325 D 511145 CDS NP_417737.1 16131159 947763 3422436..3423194 1 NC_000913.3 putative ATP-binding component of a transport system; ATP-binding component of ABC superfamily; putative amino-acid transporter subunit 3423194 yhdZ 947763 yhdZ Escherichia coli str. K-12 substr. MG1655 putative amino-acid transporter subunit NP_417737.1 3422436 D 511145 CDS NP_417738.4 90111568 947775 3429236..3429790 1 NC_000913.3 putative transferase; bacterial transferase hexapeptide domain protein 3429790 yrdA 947775 yrdA Escherichia coli str. K-12 substr. MG1655 bacterial transferase hexapeptide domain protein NP_417738.4 3429236 D 511145 CDS NP_417739.1 16131161 947774 complement(3429766..3430023) 1 NC_000913.3 DUF1488 family protein 3430023 yrdB 947774 yrdB Escherichia coli str. K-12 substr. MG1655 DUF1488 family protein NP_417739.1 3429766 R 511145 CDS NP_417740.1 16131162 947776 complement(3430020..3430838) 1 NC_000913.3 dehydroshikimate reductase; dehydroshikimate reductase, NAD(P)-binding 3430838 aroE 947776 aroE Escherichia coli str. K-12 substr. MG1655 dehydroshikimate reductase, NAD(P)-binding NP_417740.1 3430020 R 511145 CDS NP_417741.1 16131163 947783 complement(3430843..3431415) 1 NC_000913.3 tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein, threonine-dependent ADP-forming ATPase 3431415 tsaC 947783 tsaC Escherichia coli str. K-12 substr. MG1655 tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein, threonine-dependent ADP-forming ATPase NP_417741.1 3430843 R 511145 CDS YP_026210.1 49176335 947782 complement(3431420..3431962) 1 NC_000913.3 putative DNA topoisomerase 3431962 yrdD 947782 yrdD Escherichia coli str. K-12 substr. MG1655 putative DNA topoisomerase YP_026210.1 3431420 R 511145 CDS NP_417743.1 16131165 947781 complement(3431991..3432464) 1 NC_000913.3 DUF494 family putative periplasmic protein 3432464 smg 947781 smg Escherichia coli str. K-12 substr. MG1655 DUF494 family putative periplasmic protein NP_417743.1 3431991 R 511145 CDS YP_026211.1 49176336 2847708 complement(3432436..3433560) 1 NC_000913.3 DNA recombination-mediator A family protein 3433560 smf 2847708 smf Escherichia coli str. K-12 substr. MG1655 DNA recombination-mediator A family protein YP_026211.1 3432436 R 511145 CDS NP_417745.1 16131166 947780 3433690..3434199 1 NC_000913.3 peptide deformylase 3434199 def 947780 def Escherichia coli str. K-12 substr. MG1655 peptide deformylase NP_417745.1 3433690 D 511145 CDS NP_417746.1 16131167 947779 3434214..3435161 1 NC_000913.3 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase 3435161 fmt 947779 fmt Escherichia coli str. K-12 substr. MG1655 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase NP_417746.1 3434214 D 511145 CDS NP_417747.1 16131168 947789 3435207..3436496 1 NC_000913.3 16S rRNA m5C967 methyltransferase; 16S rRNA m(5)C967 methyltransferase, SAM-dependent 3436496 rsmB 947789 rsmB Escherichia coli str. K-12 substr. MG1655 16S rRNA m(5)C967 methyltransferase, SAM-dependent NP_417747.1 3435207 D 511145 CDS NP_417748.1 16131169 947788 3436518..3437894 1 NC_000913.3 transport of potassium; NAD-binding component of TrK potassium transporter 3437894 trkA 947788 trkA Escherichia coli str. K-12 substr. MG1655 NAD-binding component of TrK potassium transporter NP_417748.1 3436518 D 511145 CDS NP_417749.1 16131170 947787 3438024..3438434 1 NC_000913.3 mechanosensitive channel protein, high conductance 3438434 mscL 947787 mscL Escherichia coli str. K-12 substr. MG1655 mechanosensitive channel protein, high conductance NP_417749.1 3438024 D 511145 CDS YP_588467.1 94541124 1450289 complement(3438431..3438649) 1 NC_000913.3 alternate ribosome-rescue factor A 3438649 arfA 1450289 arfA Escherichia coli str. K-12 substr. MG1655 alternate ribosome-rescue factor A YP_588467.1 3438431 R 511145 CDS NP_417751.1 16131171 947786 complement(3438705..3439130) 1 NC_000913.3 zntA gene transcriptional activator 3439130 zntR 947786 zntR Escherichia coli str. K-12 substr. MG1655 zntA gene transcriptional activator NP_417751.1 3438705 R 511145 CDS NP_417752.1 16131172 947785 complement(3439141..3439509) 1 NC_000913.3 DUF1992 family protein 3439509 yhdN 947785 yhdN Escherichia coli str. K-12 substr. MG1655 DUF1992 family protein NP_417752.1 3439141 R 511145 CDS NP_417753.1 16131173 947784 complement(3439616..3439999) 1 NC_000913.3 50S ribosomal subunit protein L17 3439999 rplQ 947784 rplQ Escherichia coli str. K-12 substr. MG1655 50S ribosomal subunit protein L17 NP_417753.1 3439616 R 511145 CDS NP_417754.1 16131174 947794 complement(3440040..3441029) 1 NC_000913.3 RNA polymerase, alpha subunit 3441029 rpoA 947794 rpoA Escherichia coli str. K-12 substr. MG1655 RNA polymerase, alpha subunit NP_417754.1 3440040 R 511145 CDS NP_417755.1 16131175 947793 complement(3441055..3441675) 1 NC_000913.3 30S ribosomal subunit protein S4 3441675 rpsD 947793 rpsD Escherichia coli str. K-12 substr. MG1655 30S ribosomal subunit protein S4 NP_417755.1 3441055 R 511145 CDS NP_417756.1 16131176 947792 complement(3441709..3442098) 1 NC_000913.3 30S ribosomal subunit protein S11 3442098 rpsK 947792 rpsK Escherichia coli str. K-12 substr. MG1655 30S ribosomal subunit protein S11 NP_417756.1 3441709 R 511145 CDS NP_417757.1 16131177 947791 complement(3442115..3442471) 1 NC_000913.3 30S ribosomal subunit protein S13 3442471 rpsM 947791 rpsM Escherichia coli str. K-12 substr. MG1655 30S ribosomal subunit protein S13 NP_417757.1 3442115 R 511145 CDS NP_417758.1 16131178 947805 complement(3442618..3442734) 1 NC_000913.3 50S ribosomal subunit protein L36 3442734 rpmJ 947805 rpmJ Escherichia coli str. K-12 substr. MG1655 50S ribosomal subunit protein L36 NP_417758.1 3442618 R 511145 CDS NP_417759.1 16131179 947799 complement(3442766..3444097) 1 NC_000913.3 putative ATPase subunit of translocase; preprotein translocase membrane subunit 3444097 secY 947799 secY Escherichia coli str. K-12 substr. MG1655 preprotein translocase membrane subunit NP_417759.1 3442766 R 511145 CDS NP_417760.1 16131180 947798 complement(3444105..3444539) 1 NC_000913.3 50S ribosomal subunit protein L15 3444539 rplO 947798 rplO Escherichia coli str. K-12 substr. MG1655 50S ribosomal subunit protein L15 NP_417760.1 3444105 R 511145 CDS NP_417761.1 16131181 947797 complement(3444543..3444722) 1 NC_000913.3 50S ribosomal subunit protein L30 3444722 rpmD 947797 rpmD Escherichia coli str. K-12 substr. MG1655 50S ribosomal subunit protein L30 NP_417761.1 3444543 R 511145 CDS NP_417762.1 16131182 947795 complement(3444726..3445229) 1 NC_000913.3 30S ribosomal subunit protein S5 3445229 rpsE 947795 rpsE Escherichia coli str. K-12 substr. MG1655 30S ribosomal subunit protein S5 NP_417762.1 3444726 R 511145 CDS NP_417763.1 16131183 947804 complement(3445244..3445597) 1 NC_000913.3 50S ribosomal subunit protein L18 3445597 rplR 947804 rplR Escherichia coli str. K-12 substr. MG1655 50S ribosomal subunit protein L18 NP_417763.1 3445244 R 511145 CDS NP_417764.1 16131184 947803 complement(3445607..3446140) 1 NC_000913.3 50S ribosomal subunit protein L6 3446140 rplF 947803 rplF Escherichia coli str. K-12 substr. MG1655 50S ribosomal subunit protein L6 NP_417764.1 3445607 R 511145 CDS NP_417765.1 16131185 947802 complement(3446153..3446545) 1 NC_000913.3 30S ribosomal subunit protein S8, and regulator; 30S ribosomal subunit protein S8 3446545 rpsH 947802 rpsH Escherichia coli str. K-12 substr. MG1655 30S ribosomal subunit protein S8 NP_417765.1 3446153 R 511145 CDS NP_417766.1 16131186 947801 complement(3446579..3446884) 1 NC_000913.3 30S ribosomal subunit protein S14 3446884 rpsN 947801 rpsN Escherichia coli str. K-12 substr. MG1655 30S ribosomal subunit protein S14 NP_417766.1 3446579 R 511145 CDS NP_417767.1 16131187 947800 complement(3446899..3447438) 1 NC_000913.3 50S ribosomal subunit protein L5 3447438 rplE 947800 rplE Escherichia coli str. K-12 substr. MG1655 50S ribosomal subunit protein L5 NP_417767.1 3446899 R 511145 CDS NP_417768.1 16131188 947810 complement(3447453..3447767) 1 NC_000913.3 50S ribosomal subunit protein L24 3447767 rplX 947810 rplX Escherichia coli str. K-12 substr. MG1655 50S ribosomal subunit protein L24 NP_417768.1 3447453 R 511145 CDS NP_417769.1 16131189 947809 complement(3447778..3448149) 1 NC_000913.3 50S ribosomal subunit protein L14 3448149 rplN 947809 rplN Escherichia coli str. K-12 substr. MG1655 50S ribosomal subunit protein L14 NP_417769.1 3447778 R 511145 CDS NP_417770.1 16131190 947808 complement(3448314..3448568) 1 NC_000913.3 30S ribosomal subunit protein S17 3448568 rpsQ 947808 rpsQ Escherichia coli str. K-12 substr. MG1655 30S ribosomal subunit protein S17 NP_417770.1 3448314 R 511145 CDS NP_417771.1 16131191 947807 complement(3448568..3448759) 1 NC_000913.3 50S ribosomal subunit protein L29 3448759 rpmC 947807 rpmC Escherichia coli str. K-12 substr. MG1655 50S ribosomal subunit protein L29 NP_417771.1 3448568 R 511145 CDS NP_417772.1 16131192 947806 complement(3448759..3449169) 1 NC_000913.3 50S ribosomal subunit protein L16 3449169 rplP 947806 rplP Escherichia coli str. K-12 substr. MG1655 50S ribosomal subunit protein L16 NP_417772.1 3448759 R 511145 CDS NP_417773.1 16131193 947814 complement(3449182..3449883) 1 NC_000913.3 30S ribosomal subunit protein S3 3449883 rpsC 947814 rpsC Escherichia coli str. K-12 substr. MG1655 30S ribosomal subunit protein S3 NP_417773.1 3449182 R 511145 CDS NP_417774.1 16131194 947813 complement(3449901..3450233) 1 NC_000913.3 50S ribosomal subunit protein L22 3450233 rplV 947813 rplV Escherichia coli str. K-12 substr. MG1655 50S ribosomal subunit protein L22 NP_417774.1 3449901 R 511145 CDS NP_417775.1 16131195 947811 complement(3450248..3450526) 1 NC_000913.3 30S ribosomal subunit protein S19 3450526 rpsS 947811 rpsS Escherichia coli str. K-12 substr. MG1655 30S ribosomal subunit protein S19 NP_417775.1 3450248 R 511145 CDS NP_417776.1 16131196 947820 complement(3450543..3451364) 1 NC_000913.3 50S ribosomal subunit protein L2 3451364 rplB 947820 rplB Escherichia coli str. K-12 substr. MG1655 50S ribosomal subunit protein L2 NP_417776.1 3450543 R 511145 CDS NP_417777.1 16131197 947819 complement(3451382..3451684) 1 NC_000913.3 50S ribosomal subunit protein L23 3451684 rplW 947819 rplW Escherichia coli str. K-12 substr. MG1655 50S ribosomal subunit protein L23 NP_417777.1 3451382 R 511145 CDS NP_417778.1 16131198 947818 complement(3451681..3452286) 1 NC_000913.3 50S ribosomal subunit protein L4, regulates expression of S10 operon; 50S ribosomal subunit protein L4 3452286 rplD 947818 rplD Escherichia coli str. K-12 substr. MG1655 50S ribosomal subunit protein L4 NP_417778.1 3451681 R 511145 CDS NP_417779.1 16131199 947817 complement(3452297..3452926) 1 NC_000913.3 50S ribosomal subunit protein L3 3452926 rplC 947817 rplC Escherichia coli str. K-12 substr. MG1655 50S ribosomal subunit protein L3 NP_417779.1 3452297 R 511145 CDS NP_417780.1 16131200 947816 complement(3452959..3453270) 1 NC_000913.3 30S ribosomal subunit protein S10 3453270 rpsJ 947816 rpsJ Escherichia coli str. K-12 substr. MG1655 30S ribosomal subunit protein S10 NP_417780.1 3452959 R 511145 CDS NP_417781.1 16131201 947826 complement(3453508..3453927) 1 NC_000913.3 calcium-binding protein required for initiation of chromosome replication; part of gsp divergon involved in type II protein secretion 3453927 gspB 947826 gspB Escherichia coli str. K-12 substr. MG1655 part of gsp divergon involved in type II protein secretion NP_417781.1 3453508 R 511145 CDS NP_417782.1 16131202 947825 complement(3453929..3455398) 1 NC_000913.3 putative export protein A for general secretion pathway (GSP); general secretory pathway component, cryptic 3455398 gspA 947825 gspA Escherichia coli str. K-12 substr. MG1655 general secretory pathway component, cryptic NP_417782.1 3453929 R 511145 CDS NP_417783.1 16131203 947824 3455578..3456393 1 NC_000913.3 general secretory pathway component, cryptic 3456393 gspC 947824 gspC Escherichia coli str. K-12 substr. MG1655 general secretory pathway component, cryptic NP_417783.1 3455578 D 511145 CDS NP_417784.4 90111569 947822 3456377..3458329 1 NC_000913.3 general secretory pathway component, cryptic 3458329 gspD 947822 gspD Escherichia coli str. K-12 substr. MG1655 general secretory pathway component, cryptic NP_417784.4 3456377 D 511145 CDS NP_417785.1 16131205 947823 3458339..3459820 1 NC_000913.3 general secretory pathway component, cryptic 3459820 gspE 947823 gspE Escherichia coli str. K-12 substr. MG1655 general secretory pathway component, cryptic NP_417785.1 3458339 D 511145 CDS NP_417786.1 16131206 947829 3459817..3461013 1 NC_000913.3 general secretory pathway component, cryptic 3461013 gspF 947829 gspF Escherichia coli str. K-12 substr. MG1655 general secretory pathway component, cryptic NP_417786.1 3459817 D 511145 CDS NP_417787.1 16131207 947827 3461023..3461460 1 NC_000913.3 pseudopilin, cryptic, general secretion pathway 3461460 gspG 947827 gspG Escherichia coli str. K-12 substr. MG1655 pseudopilin, cryptic, general secretion pathway NP_417787.1 3461023 D 511145 CDS NP_417788.1 16131208 947834 3461468..3461977 1 NC_000913.3 putative general secretory pathway component, cryptic 3461977 gspH 947834 gspH Escherichia coli str. K-12 substr. MG1655 putative general secretory pathway component, cryptic NP_417788.1 3461468 D 511145 CDS NP_417789.4 90111570 947833 3461974..3462351 1 NC_000913.3 general secretory pathway component, cryptic 3462351 gspI 947833 gspI Escherichia coli str. K-12 substr. MG1655 general secretory pathway component, cryptic NP_417789.4 3461974 D 511145 CDS NP_417790.1 16131210 947832 3462344..3462931 1 NC_000913.3 putative general secretory pathway component, cryptic 3462931 gspJ 947832 gspJ Escherichia coli str. K-12 substr. MG1655 putative general secretory pathway component, cryptic NP_417790.1 3462344 D 511145 CDS NP_417791.1 16131211 947831 3462924..3463907 1 NC_000913.3 general secretory pathway component, cryptic 3463907 gspK 947831 gspK Escherichia coli str. K-12 substr. MG1655 general secretory pathway component, cryptic NP_417791.1 3462924 D 511145 CDS NP_417792.2 90111571 947842 3463922..3465085 1 NC_000913.3 general secretory pathway component, cryptic 3465085 gspL 947842 gspL Escherichia coli str. K-12 substr. MG1655 general secretory pathway component, cryptic NP_417792.2 3463922 D 511145 CDS NP_417793.2 90111572 947841 3465082..3465543 1 NC_000913.3 general secretory pathway component, cryptic 3465543 gspM 947841 gspM Escherichia coli str. K-12 substr. MG1655 general secretory pathway component, cryptic NP_417793.2 3465082 D 511145 CDS NP_417794.1 16131214 947840 3465543..3466220 1 NC_000913.3 bifunctional prepilin leader peptidase/ methylase 3466220 gspO 947840 gspO Escherichia coli str. K-12 substr. MG1655 bifunctional prepilin leader peptidase/ methylase NP_417794.1 3465543 D 511145 CDS NP_417795.1 16131215 947839 complement(3466249..3466725) 1 NC_000913.3 bacterioferrin, an iron storage homoprotein; bacterioferritin, iron storage and detoxification protein 3466725 bfr 947839 bfr Escherichia coli str. K-12 substr. MG1655 bacterioferritin, iron storage and detoxification protein NP_417795.1 3466249 R 511145 CDS NP_417796.1 16131216 947836 complement(3466797..3466991) 1 NC_000913.3 bacterioferritin-associated ferredoxin 3466991 bfd 947836 bfd Escherichia coli str. K-12 substr. MG1655 bacterioferritin-associated ferredoxin NP_417796.1 3466797 R 511145 CDS NP_417797.1 16131217 947837 complement(3467160..3469853) 1 NC_000913.3 periplasmic endochitinase 3469853 chiA 947837 chiA Escherichia coli str. K-12 substr. MG1655 periplasmic endochitinase NP_417797.1 3467160 R 511145 CDS NP_417798.1 16131218 947838 complement(3470145..3471329) 1 NC_000913.3 translation elongation factor EF-Tu 1 3471329 tufA 947838 tufA Escherichia coli str. K-12 substr. MG1655 translation elongation factor EF-Tu 1 NP_417798.1 3470145 R 511145 CDS NP_417799.1 16131219 947847 complement(3471400..3473514) 1 NC_000913.3 GTP-binding protein chain elongation factor EF-G; protein chain elongation factor EF-G, GTP-binding 3473514 fusA 947847 fusA Escherichia coli str. K-12 substr. MG1655 protein chain elongation factor EF-G, GTP-binding NP_417799.1 3471400 R 511145 CDS NP_417800.1 16131220 947846 complement(3473542..3474081) 1 NC_000913.3 30S ribosomal subunit protein S7, initiates assembly; 30S ribosomal subunit protein S7 3474081 rpsG 947846 rpsG Escherichia coli str. K-12 substr. MG1655 30S ribosomal subunit protein S7 NP_417800.1 3473542 R 511145 CDS NP_417801.1 16131221 947845 complement(3474178..3474552) 1 NC_000913.3 30S ribosomal subunit protein S12 3474552 rpsL 947845 rpsL Escherichia coli str. K-12 substr. MG1655 30S ribosomal subunit protein S12 NP_417801.1 3474178 R 511145 CDS NP_417802.1 16131222 947844 complement(3474678..3474965) 1 NC_000913.3 mnm(5)-s(2)U34-tRNA synthesis 2-thiolation protein 3474965 tusB 947844 tusB Escherichia coli str. K-12 substr. MG1655 mnm(5)-s(2)U34-tRNA synthesis 2-thiolation protein NP_417802.1 3474678 R 511145 CDS NP_417803.1 16131223 947853 complement(3474973..3475332) 1 NC_000913.3 mnm(5)-s(2)U34-tRNA synthesis 2-thiolation protein 3475332 tusC 947853 tusC Escherichia coli str. K-12 substr. MG1655 mnm(5)-s(2)U34-tRNA synthesis 2-thiolation protein NP_417803.1 3474973 R 511145 CDS NP_417804.1 16131224 947852 complement(3475332..3475718) 1 NC_000913.3 sulfurtransferase for 2-thiolation step of mnm(5)-s(2)U34-tRNA synthesis 3475718 tusD 947852 tusD Escherichia coli str. K-12 substr. MG1655 sulfurtransferase for 2-thiolation step of mnm(5)-s(2)U34-tRNA synthesis NP_417804.1 3475332 R 511145 CDS NP_417805.4 90111573 947851 complement(3475718..3476440) 1 NC_000913.3 putative PAS domain-containing DNA-binding transcriptional regulator 3476440 yheO 947851 yheO Escherichia coli str. K-12 substr. MG1655 putative PAS domain-containing DNA-binding transcriptional regulator NP_417805.4 3475718 R 511145 CDS NP_417806.1 16131226 947850 complement(3476607..3477419) 1 NC_000913.3 FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) 3477419 fkpA 947850 fkpA Escherichia coli str. K-12 substr. MG1655 FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) NP_417806.1 3476607 R 511145 CDS NP_417807.1 16131227 947849 3477640..3477858 1 NC_000913.3 host factor for lysis of phiX174 infection; phi X174 lysis protein 3477858 slyX 947849 slyX Escherichia coli str. K-12 substr. MG1655 phi X174 lysis protein NP_417807.1 3477640 D 511145 CDS NP_417808.1 16131228 947859 complement(3477907..3478497) 1 NC_000913.3 FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase); FKBP-type peptidyl prolyl cis-trans isomerase (rotamase) 3478497 slyD 947859 slyD Escherichia coli str. K-12 substr. MG1655 FKBP-type peptidyl prolyl cis-trans isomerase (rotamase) NP_417808.1 3477907 R 511145 CDS YP_588468.1 94541125 1450290 complement(3478592..3478792) 1 NC_000913.3 DUF2387 family putative metal-binding protein 3478792 yheV 1450290 yheV Escherichia coli str. K-12 substr. MG1655 DUF2387 family putative metal-binding protein YP_588468.1 3478592 R 511145 CDS NP_417809.1 16131229 947858 complement(3478802..3480607) 1 NC_000913.3 K+ efflux; NEM-activable K+/H+ antiporter; potassium:proton antiporter 3480607 kefB 947858 kefB Escherichia coli str. K-12 substr. MG1655 potassium:proton antiporter NP_417809.1 3478802 R 511145 CDS NP_417810.1 16131230 947857 complement(3480607..3481161) 1 NC_000913.3 putative NAD(P)H oxidoreductase; potassium-efflux system ancillary protein for KefB, glutathione-regulated 3481161 kefG 947857 kefG Escherichia coli str. K-12 substr. MG1655 potassium-efflux system ancillary protein for KefB, glutathione-regulated NP_417810.1 3480607 R 511145 CDS NP_417811.1 16131231 947856 3481289..3483202 1 NC_000913.3 putative ATP-binding component of a transport system; putative transporter subunit of ABC superfamily: ATP-binding component 3483202 yheS 947856 yheS Escherichia coli str. K-12 substr. MG1655 putative transporter subunit of ABC superfamily: ATP-binding component NP_417811.1 3481289 D 511145 CDS NP_417812.1 16131232 947855 3483202..3484224 1 NC_000913.3 UPF0017 family putative hydrolase 3484224 yheT 947855 yheT Escherichia coli str. K-12 substr. MG1655 UPF0017 family putative hydrolase NP_417812.1 3483202 D 511145 CDS NP_417813.1 16131233 947863 3484218..3484436 1 NC_000913.3 UPF0270 family protein 3484436 yheU 947863 yheU Escherichia coli str. K-12 substr. MG1655 UPF0270 family protein NP_417813.1 3484218 D 511145 CDS NP_417814.1 16131234 947862 3484490..3485359 1 NC_000913.3 probable phosphoribulokinase; putative phosphoribulokinase 3485359 prkB 947862 prkB Escherichia coli str. K-12 substr. MG1655 putative phosphoribulokinase NP_417814.1 3484490 D 511145 CDS NP_417815.1 16131235 947860 complement(3485414..3485818) 1 NC_000913.3 OsmC family protein 3485818 yhfA 947860 yhfA Escherichia coli str. K-12 substr. MG1655 OsmC family protein NP_417815.1 3485414 R 511145 CDS NP_417816.1 16131236 947867 3486120..3486752 1 NC_000913.3 cyclic AMP receptor protein; cAMP-activated global transcription factor, mediator of catabolite repression 3486752 crp 947867 crp Escherichia coli str. K-12 substr. MG1655 cAMP-activated global transcription factor, mediator of catabolite repression NP_417816.1 3486120 D 511145 CDS NP_417817.2 90111574 947866 3486791..3488893 1 NC_000913.3 putative transporter, FUSC superfamily inner membrane protein, tandem domains 3488893 yhfK 947866 yhfK Escherichia coli str. K-12 substr. MG1655 putative transporter, FUSC superfamily inner membrane protein, tandem domains NP_417817.2 3486791 D 511145 CDS NP_417818.1 16131238 947864 complement(3488960..3490180) 1 NC_000913.3 acetylornithine delta-aminotransferase; bifunctional acetylornithine aminotransferase/ succinyldiaminopimelate aminotransferase 3490180 argD 947864 argD Escherichia coli str. K-12 substr. MG1655 bifunctional acetylornithine aminotransferase/ succinyldiaminopimelate aminotransferase NP_417818.1 3488960 R 511145 CDS NP_417819.1 16131239 947873 complement(3490266..3490829) 1 NC_000913.3 p-aminobenzoate synthetase, component II; aminodeoxychorismate synthase, subunit II 3490829 pabA 947873 pabA Escherichia coli str. K-12 substr. MG1655 aminodeoxychorismate synthase, subunit II NP_417819.1 3490266 R 511145 CDS NP_417820.1 16131240 947872 complement(3490861..3491463) 1 NC_000913.3 induced in stationary phase, recognized by rpoS, affects cell division; stationary-phase adenosine monophosphate-protein transferase domain protein 3491463 fic 947872 fic Escherichia coli str. K-12 substr. MG1655 stationary-phase adenosine monophosphate-protein transferase domain protein NP_417820.1 3490861 R 511145 CDS NP_417821.1 16131241 947871 complement(3491453..3491620) 1 NC_000913.3 putative Fic-binding protein 3491620 yhfG 947871 yhfG Escherichia coli str. K-12 substr. MG1655 putative Fic-binding protein NP_417821.1 3491453 R 511145 CDS NP_417822.1 16131242 947870 complement(3491725..3492297) 1 NC_000913.3 peptidyl-prolyl cis-trans isomerase A (rotamase A) 3492297 ppiA 947870 ppiA Escherichia coli str. K-12 substr. MG1655 peptidyl-prolyl cis-trans isomerase A (rotamase A) NP_417822.1 3491725 R 511145 CDS NP_417823.1 16131243 947869 3492568..3493749 1 NC_000913.3 putative transport; putative transporter 3493749 tsgA 947869 tsgA Escherichia coli str. K-12 substr. MG1655 putative transporter NP_417823.1 3492568 D 511145 CDS NP_417824.1 16131244 947868 3494011..3496554 1 NC_000913.3 nitrite reductase (NAD(P)H) subunit; nitrite reductase, large subunit, NAD(P)H-binding 3496554 nirB 947868 nirB Escherichia coli str. K-12 substr. MG1655 nitrite reductase, large subunit, NAD(P)H-binding NP_417824.1 3494011 D 511145 CDS NP_417825.1 16131245 947881 3496551..3496877 1 NC_000913.3 nitrite reductase (NAD(P)H) subunit; nitrite reductase, NAD(P)H-binding, small subunit 3496877 nirD 947881 nirD Escherichia coli str. K-12 substr. MG1655 nitrite reductase, NAD(P)H-binding, small subunit NP_417825.1 3496551 D 511145 CDS YP_026212.2 90111575 2847757 3497003..3497809 1 NC_000913.3 nitrite reductase activity; nitrite transporter 3497809 nirC 2847757 nirC Escherichia coli str. K-12 substr. MG1655 nitrite transporter YP_026212.2 3497003 D 511145 CDS NP_417827.1 16131246 947880 3497828..3499201 1 NC_000913.3 uroporphyrinogen III methylase; sirohaeme biosynthesis; fused siroheme synthase 1,3-dimethyluroporphyriongen III dehydrogenase and siroheme ferrochelatase/uroporphyrinogen methyltransferase 3499201 cysG 947880 cysG Escherichia coli str. K-12 substr. MG1655 fused siroheme synthase 1,3-dimethyluroporphyriongen III dehydrogenase and siroheme ferrochelatase/uroporphyrinogen methyltransferase NP_417827.1 3497828 D 511145 CDS NP_417828.1 16131247 947879 3499448..3499615 1 NC_000913.3 small lipoprotein 3499615 yhfL 947879 yhfL Escherichia coli str. K-12 substr. MG1655 small lipoprotein NP_417828.1 3499448 D 511145 CDS NP_417829.2 90111576 947878 3499910..3501247 1 NC_000913.3 putative amino acid/amine transport protein; putative fructoselysine transporter 3501247 frlA 947878 frlA Escherichia coli str. K-12 substr. MG1655 putative fructoselysine transporter NP_417829.2 3499910 D 511145 CDS NP_417830.4 162135909 947875 3501268..3502290 1 NC_000913.3 putative transport protein; fructoselysine-6-P-deglycase 3502290 frlB 947875 frlB Escherichia coli str. K-12 substr. MG1655 fructoselysine-6-P-deglycase NP_417830.4 3501268 D 511145 CDS YP_026213.1 49176341 2847758 3502340..3503170 1 NC_000913.3 putative fructoselysine or fructoselysine 6-P isomerase; fructoselysine 3-epimerase 3503170 frlC 2847758 frlC Escherichia coli str. K-12 substr. MG1655 fructoselysine 3-epimerase YP_026213.1 3502340 D 511145 CDS NP_417833.1 16131252 947886 3503167..3503952 1 NC_000913.3 putative kinase; fructoselysine 6-kinase 3503952 frlD 947886 frlD Escherichia coli str. K-12 substr. MG1655 fructoselysine 6-kinase NP_417833.1 3503167 D 511145 CDS NP_417834.6 162135910 947885 3504052..3504783 1 NC_000913.3 putative transcriptional regulator; putative DNA-binding transcriptional regulator 3504783 frlR 947885 frlR Escherichia coli str. K-12 substr. MG1655 putative DNA-binding transcriptional regulator NP_417834.6 3504052 D 511145 CDS NP_417835.1 16131254 947884 complement(3504935..3506020) 1 NC_000913.3 FNR-regulated pyridoxal phosphate-dependent aminotransferase family protein 3506020 yhfS 947884 yhfS Escherichia coli str. K-12 substr. MG1655 FNR-regulated pyridoxal phosphate-dependent aminotransferase family protein NP_417835.1 3504935 R 511145 CDS NP_417836.1 16131255 947883 complement(3506032..3507336) 1 NC_000913.3 putative transport system permease protein; inner membrane protein 3507336 yhfT 947883 yhfT Escherichia coli str. K-12 substr. MG1655 inner membrane protein NP_417836.1 3506032 R 511145 CDS NP_417837.2 90111579 947892 complement(3507348..3507701) 1 NC_000913.3 DUF2620 family protein 3507701 yhfU 947892 yhfU Escherichia coli str. K-12 substr. MG1655 DUF2620 family protein NP_417837.2 3507348 R 511145 CDS NP_417838.1 16131257 947891 complement(3507712..3508590) 1 NC_000913.3 putative hydrolase; phosphotriesterase homology protein 3508590 php 947891 php Escherichia coli str. K-12 substr. MG1655 phosphotriesterase homology protein NP_417838.1 3507712 R 511145 CDS NP_417839.1 16131258 947890 complement(3508587..3509813) 1 NC_000913.3 putative mutase; phosphopentomutase-related metalloenzyme superfamily protein 3509813 yhfW 947890 yhfW Escherichia coli str. K-12 substr. MG1655 phosphopentomutase-related metalloenzyme superfamily protein NP_417839.1 3508587 R 511145 CDS NP_417840.1 16131259 947889 complement(3509813..3510976) 1 NC_000913.3 putative pyridoxal 5'-phosphate binding protein 3510976 yhfX 947889 yhfX Escherichia coli str. K-12 substr. MG1655 putative pyridoxal 5'-phosphate binding protein NP_417840.1 3509813 R 511145 CDS NP_417841.2 90111580 947888 complement(3511060..3511422) 1 NC_000913.3 PRD domain protein 3511422 yhfY 947888 yhfY Escherichia coli str. K-12 substr. MG1655 PRD domain protein NP_417841.2 3511060 R 511145 CDS YP_026214.1 49176343 947897 complement(3511439..3512344) 1 NC_000913.3 putative DNA-binding transcriptional regulator 3512344 yhfZ 947897 yhfZ Escherichia coli str. K-12 substr. MG1655 putative DNA-binding transcriptional regulator YP_026214.1 3511439 R 511145 CDS NP_417843.1 16131262 947894 complement(3512634..3513638) 1 NC_000913.3 tryptophan tRNA synthetase; tryptophanyl-tRNA synthetase 3513638 trpS 947894 trpS Escherichia coli str. K-12 substr. MG1655 tryptophanyl-tRNA synthetase NP_417843.1 3512634 R 511145 CDS NP_417844.1 16131263 947895 complement(3513631..3514389) 1 NC_000913.3 phosphoglycolate phosphatase 3514389 gph 947895 gph Escherichia coli str. K-12 substr. MG1655 phosphoglycolate phosphatase NP_417844.1 3513631 R 511145 CDS NP_417845.1 16131264 947896 complement(3514382..3515059) 1 NC_000913.3 D-ribulose-5-phosphate 3-epimerase 3515059 rpe 947896 rpe Escherichia coli str. K-12 substr. MG1655 D-ribulose-5-phosphate 3-epimerase NP_417845.1 3514382 R 511145 CDS NP_417846.1 16131265 947893 complement(3515077..3515913) 1 NC_000913.3 DNA adenine methyltransferase 3515913 dam 947893 dam Escherichia coli str. K-12 substr. MG1655 DNA adenine methyltransferase NP_417846.1 3515077 R 511145 CDS NP_417847.1 16131266 947930 complement(3516020..3517306) 1 NC_000913.3 putative membrane protein; interferes with cell division; cell division protein that binds to the septal ring 3517306 damX 947930 damX Escherichia coli str. K-12 substr. MG1655 cell division protein that binds to the septal ring NP_417847.1 3516020 R 511145 CDS NP_417848.1 16131267 947927 complement(3517398..3518486) 1 NC_000913.3 3-dehydroquinate synthase 3518486 aroB 947927 aroB Escherichia coli str. K-12 substr. MG1655 3-dehydroquinate synthase NP_417848.1 3517398 R 511145 CDS YP_026215.2 90111581 2847759 complement(3518543..3519064) 1 NC_000913.3 shikimate kinase I 3519064 aroK 2847759 aroK Escherichia coli str. K-12 substr. MG1655 shikimate kinase I YP_026215.2 3518543 R 511145 CDS NP_417850.1 16131268 947901 complement(3519465..3520703) 1 NC_000913.3 putative transport portein; DNA catabolic putative fimbrial transporter 3520703 hofQ 947901 hofQ Escherichia coli str. K-12 substr. MG1655 DNA catabolic putative fimbrial transporter NP_417850.1 3519465 R 511145 CDS NP_417851.4 90111582 947900 complement(3520615..3521019) 1 NC_000913.3 DNA catabolic protein 3521019 hofP 947900 hofP Escherichia coli str. K-12 substr. MG1655 DNA catabolic protein NP_417851.4 3520615 R 511145 CDS NP_417852.1 16131270 947899 complement(3521009..3521449) 1 NC_000913.3 DNA catabolic protein 3521449 hofO 947899 hofO Escherichia coli str. K-12 substr. MG1655 DNA catabolic protein NP_417852.1 3521009 R 511145 CDS NP_417853.1 16131271 947898 complement(3521433..3521972) 1 NC_000913.3 DNA catabolic putative fimbrial assembly protein 3521972 hofN 947898 hofN Escherichia coli str. K-12 substr. MG1655 DNA catabolic putative fimbrial assembly protein NP_417853.1 3521433 R 511145 CDS NP_417854.4 90111583 947908 complement(3521972..3522751) 1 NC_000913.3 DNA catabolic putative pilus assembly protein 3522751 hofM 947908 hofM Escherichia coli str. K-12 substr. MG1655 DNA catabolic putative pilus assembly protein NP_417854.4 3521972 R 511145 CDS NP_417855.4 162135911 947907 3522871..3525423 1 NC_000913.3 peptidoglycan synthetase; penicillin-binding protein 1A; fused penicillin-binding protein 1a: murein transglycosylase/murein transpeptidase 3525423 mrcA 947907 mrcA Escherichia coli str. K-12 substr. MG1655 fused penicillin-binding protein 1a: murein transglycosylase/murein transpeptidase NP_417855.4 3522871 D 511145 CDS NP_417856.1 16131274 947906 complement(3525589..3526149) 1 NC_000913.3 adenosine nucleotide hydrolase; substrates include Ap3A, Ap2A, ADP-ribose, NADH 3526149 nudE 947906 nudE Escherichia coli str. K-12 substr. MG1655 adenosine nucleotide hydrolase; substrates include Ap3A, Ap2A, ADP-ribose, NADH NP_417856.1 3525589 R 511145 CDS NP_417857.1 16131275 947905 3526469..3528604 1 NC_000913.3 putative dehydrogenase; inner membrane protein 3528604 yrfF 947905 yrfF Escherichia coli str. K-12 substr. MG1655 inner membrane protein NP_417857.1 3526469 D 511145 CDS NP_417858.4 90111585 947904 3528669..3529337 1 NC_000913.3 putative phosphatase; GMP/IMP nucleotidase 3529337 yrfG 947904 yrfG Escherichia coli str. K-12 substr. MG1655 GMP/IMP nucleotidase NP_417858.4 3528669 D 511145 CDS NP_417859.1 16131277 947912 3529348..3529749 1 NC_000913.3 ribosome-associated heat shock protein Hsp15 3529749 hslR 947912 hslR Escherichia coli str. K-12 substr. MG1655 ribosome-associated heat shock protein Hsp15 NP_417859.1 3529348 D 511145 CDS NP_417860.2 90111586 947178 3529774..3530652 1 NC_000913.3 heat shock protein Hsp33 3530652 hslO 947178 hslO Escherichia coli str. K-12 substr. MG1655 heat shock protein Hsp33 NP_417860.2 3529774 D 511145 CDS NP_417861.1 16131279 947651 complement(3530715..3532439) 1 NC_000913.3 putative transport; DUF4153 family putative inner membrane protein 3532439 yhgE 947651 yhgE Escherichia coli str. K-12 substr. MG1655 DUF4153 family putative inner membrane protein NP_417861.1 3530715 R 511145 CDS NP_417862.1 16131280 945667 3532818..3534440 1 NC_000913.3 phosphoenolpyruvate carboxykinase 3534440 pck 945667 pck Escherichia coli str. K-12 substr. MG1655 phosphoenolpyruvate carboxykinase NP_417862.1 3532818 D 511145 CDS NP_417863.1 16131281 947272 complement(3534516..3535868) 1 NC_000913.3 protein histidine kinase/phosphatase sensor for OmpR, modulates expression of ompF and ompC; sensory histidine kinase in two-component regulatory system with OmpR 3535868 envZ 947272 envZ Escherichia coli str. K-12 substr. MG1655 sensory histidine kinase in two-component regulatory system with OmpR NP_417863.1 3534516 R 511145 CDS NP_417864.1 16131282 947913 complement(3535865..3536584) 1 NC_000913.3 response regulator (sensor, EnvZ) affecting transcription of ompC and ompF: outer membrane protein synthesis; response regulator in two-component regulatory system with EnvZ 3536584 ompR 947913 ompR Escherichia coli str. K-12 substr. MG1655 response regulator in two-component regulatory system with EnvZ NP_417864.1 3535865 R 511145 CDS YP_026216.2 90111587 2847706 3536812..3537288 1 NC_000913.3 transcription elongation factor and transcript cleavage; transcript cleavage factor 3537288 greB 2847706 greB Escherichia coli str. K-12 substr. MG1655 transcript cleavage factor YP_026216.2 3536812 D 511145 CDS NP_417866.4 90111588 947911 3537385..3539706 1 NC_000913.3 putative transcriptional accessory protein 3539706 yhgF 947911 yhgF Escherichia coli str. K-12 substr. MG1655 putative transcriptional accessory protein NP_417866.4 3537385 D 511145 CDS NP_417867.1 16131284 947909 3540163..3540390 1 NC_000913.3 ferrous iron transport protein A; ferrous iron transporter, protein A 3540390 feoA 947909 feoA Escherichia coli str. K-12 substr. MG1655 ferrous iron transporter, protein A NP_417867.1 3540163 D 511145 CDS NP_417868.1 16131285 947919 3540407..3542728 1 NC_000913.3 ferrous iron transport protein B; fused ferrous iron transporter, protein B: GTP-binding protein/membrane protein 3542728 feoB 947919 feoB Escherichia coli str. K-12 substr. MG1655 fused ferrous iron transporter, protein B: GTP-binding protein/membrane protein NP_417868.1 3540407 D 511145 CDS NP_417869.1 16131286 947918 3542728..3542964 1 NC_000913.3 putative DNA-binding transcriptional regulator 3542964 feoC 947918 feoC Escherichia coli str. K-12 substr. MG1655 putative DNA-binding transcriptional regulator NP_417869.1 3542728 D 511145 CDS NP_417870.1 16131287 947917 3543167..3544045 1 NC_000913.3 transposase_31 family protein 3544045 yhgA 947917 yhgA Escherichia coli str. K-12 substr. MG1655 transposase_31 family protein NP_417870.1 3543167 D 511145 CDS NP_417871.1 16131288 947916 complement(3544074..3544844) 1 NC_000913.3 biotin biosynthesis; reaction prior to pimeloyl CoA; pimeloyl-ACP methyl ester carboxylesterase 3544844 bioH 947916 bioH Escherichia coli str. K-12 substr. MG1655 pimeloyl-ACP methyl ester carboxylesterase NP_417871.1 3544074 R 511145 CDS NP_417872.2 90111589 947915 3544882..3545565 1 NC_000913.3 DNA catabolic protein 3545565 gntX 947915 gntX Escherichia coli str. K-12 substr. MG1655 DNA catabolic protein NP_417872.2 3544882 D 511145 CDS NP_417873.1 16131290 947925 3545624..3546199 1 NC_000913.3 Fe/S biogenesis protein; putative scaffold/chaperone for damaged Fe/S proteins 3546199 nfuA 947925 nfuA Escherichia coli str. K-12 substr. MG1655 Fe/S biogenesis protein; putative scaffold/chaperone for damaged Fe/S proteins NP_417873.1 3545624 D 511145 CDS YP_026217.1 49176350 947924 3546559..3547875 1 NC_000913.3 high-affinity transport of gluconate / gluconate permease; gluconate transporter, high-affinity GNT I system 3547875 gntT 947924 gntT Escherichia coli str. K-12 substr. MG1655 gluconate transporter, high-affinity GNT I system YP_026217.1 3546559 D 511145 CDS NP_417875.1 16131292 947923 complement(3547986..3550070) 1 NC_000913.3 4-alpha-glucanotransferase (amylomaltase) 3550070 malQ 947923 malQ Escherichia coli str. K-12 substr. MG1655 4-alpha-glucanotransferase (amylomaltase) NP_417875.1 3547986 R 511145 CDS YP_026218.1 49176351 947922 complement(3550080..3552473) 1 NC_000913.3 maltodextrin phosphorylase 3552473 malP 947922 malP Escherichia coli str. K-12 substr. MG1655 maltodextrin phosphorylase YP_026218.1 3550080 R 511145 CDS NP_417877.1 16131294 947921 3553085..3555790 1 NC_000913.3 positive regulator of mal regulon; mal regulon transcriptional activator 3555790 malT 947921 malT Escherichia coli str. K-12 substr. MG1655 mal regulon transcriptional activator NP_417877.1 3553085 D 511145 CDS YP_026219.1 49176352 2847707 complement(3555833..3556849) 1 NC_000913.3 RNA 3'-terminal phosphate cyclase 3556849 rtcA 2847707 rtcA Escherichia coli str. K-12 substr. MG1655 RNA 3'-terminal phosphate cyclase YP_026219.1 3555833 R 511145 CDS NP_417879.1 16131295 947929 complement(3556853..3558079) 1 NC_000913.3 RNA-splicing ligase 3558079 rtcB 947929 rtcB Escherichia coli str. K-12 substr. MG1655 RNA-splicing ligase NP_417879.1 3556853 R 511145 CDS NP_417880.1 16131296 947928 3558268..3559866 1 NC_000913.3 sigma54-dependent regulator of rtcBA expression; sigma 54-dependent transcriptional regulator of rtcBA expression 3559866 rtcR 947928 rtcR Escherichia coli str. K-12 substr. MG1655 sigma 54-dependent transcriptional regulator of rtcBA expression NP_417880.1 3558268 D 511145 CDS b3423 947926 complement(join(3559848..3560453,3560456..3560605)) 1 NC_000913.3 pseudogene, DNA-binding transcriptional repressor;regulator; Energy metabolism, carbon: Anaerobic respiration; repressor of the glp operon; <NULL_VALUE> 3560605 glpR 947926 glpR Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 3559848 R 511145 CDS YP_026220.1 49176353 947936 complement(3560622..3561452) 1 NC_000913.3 protein of glp regulon; rhomboid intramembrane serine protease 3561452 glpG 947936 glpG Escherichia coli str. K-12 substr. MG1655 rhomboid intramembrane serine protease YP_026220.1 3560622 R 511145 CDS NP_417883.1 16131299 947935 complement(3561497..3561823) 1 NC_000913.3 rhodanese (thiosulfate:cyanide sulfertransferase); thiosulfate:cyanide sulfurtransferase (rhodanese) 3561823 glpE 947935 glpE Escherichia coli str. K-12 substr. MG1655 thiosulfate:cyanide sulfurtransferase (rhodanese) NP_417883.1 3561497 R 511145 CDS NP_417884.1 16131300 947934 3562013..3563518 1 NC_000913.3 sn-glycerol-3-phosphate dehydrogenase (aerobic); sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding 3563518 glpD 947934 glpD Escherichia coli str. K-12 substr. MG1655 sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding NP_417884.1 3562013 D 511145 CDS b3427 947933 complement(3563787..3564005) 1 NC_000913.3 pseudogene, periplasmic solute binding protein homology; <NULL_VALUE> 3564005 yzgL 947933 yzgL Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 3563787 R 511145 CDS NP_417886.1 16131302 947931 complement(3564134..3566581) 1 NC_000913.3 glycogen phosphorylase 3566581 glgP 947931 glgP Escherichia coli str. K-12 substr. MG1655 glycogen phosphorylase NP_417886.1 3564134 R 511145 CDS NP_417887.1 16131303 947932 complement(3566600..3568033) 1 NC_000913.3 glycogen synthase 3568033 glgA 947932 glgA Escherichia coli str. K-12 substr. MG1655 glycogen synthase NP_417887.1 3566600 R 511145 CDS NP_417888.1 16131304 947942 complement(3568033..3569328) 1 NC_000913.3 glucose-1-phosphate adenylyltransferase 3569328 glgC 947942 glgC Escherichia coli str. K-12 substr. MG1655 glucose-1-phosphate adenylyltransferase NP_417888.1 3568033 R 511145 CDS NP_417889.1 16131305 947941 complement(3569346..3571319) 1 NC_000913.3 part of glycogen operon, a glycosyl hydrolase, debranching enzyme; glycogen debranching enzyme 3571319 glgX 947941 glgX Escherichia coli str. K-12 substr. MG1655 glycogen debranching enzyme NP_417889.1 3569346 R 511145 CDS NP_417890.1 16131306 947940 complement(3571316..3573502) 1 NC_000913.3 1,4-alpha-glucan branching enzyme 3573502 glgB 947940 glgB Escherichia coli str. K-12 substr. MG1655 1,4-alpha-glucan branching enzyme NP_417890.1 3571316 R 511145 CDS NP_417891.1 16131307 947939 complement(3573775..3574878) 1 NC_000913.3 aspartate-semialdehyde dehydrogenase; aspartate-semialdehyde dehydrogenase, NAD(P)-binding 3574878 asd 947939 asd Escherichia coli str. K-12 substr. MG1655 aspartate-semialdehyde dehydrogenase, NAD(P)-binding NP_417891.1 3573775 R 511145 CDS NP_417892.1 16131308 947938 3575071..3575664 1 NC_000913.3 UPF0056 family inner membrane protein 3575664 yhgN 947938 yhgN Escherichia coli str. K-12 substr. MG1655 UPF0056 family inner membrane protein NP_417892.1 3575071 D 511145 CDS YP_026221.1 49176355 2847760 complement(3575721..3577061) 1 NC_000913.3 split gene, low-affinity gluconate transport permease protein in GNT I system; gluconate transporter, low affinity GNT 1 system 3577061 gntU 2847760 gntU Escherichia coli str. K-12 substr. MG1655 gluconate transporter, low affinity GNT 1 system YP_026221.1 3575721 R 511145 CDS NP_417894.2 90111591 947937 complement(3577065..3577592) 1 NC_000913.3 gluconokinase 2, thermoresistant; gluconate transport, GNT I system; gluconate kinase 2 3577592 gntK 947937 gntK Escherichia coli str. K-12 substr. MG1655 gluconate kinase 2 NP_417894.2 3577065 R 511145 CDS YP_026222.1 49176356 947946 complement(3577731..3578726) 1 NC_000913.3 regulator of gluconate (gnt) operon; d-gluconate inducible gluconate regulon transcriptional repressor 3578726 gntR 947946 gntR Escherichia coli str. K-12 substr. MG1655 d-gluconate inducible gluconate regulon transcriptional repressor YP_026222.1 3577731 R 511145 CDS NP_417896.1 16131311 947945 complement(3578950..3579645) 1 NC_000913.3 quercetinase activity in vitro 3579645 yhhW 947945 yhhW Escherichia coli str. K-12 substr. MG1655 quercetinase activity in vitro NP_417896.1 3578950 R 511145 CDS NP_417897.1 16131312 947944 complement(3579768..3580805) 1 NC_000913.3 putative regulator; putative oxidoreductase 3580805 yhhX 947944 yhhX Escherichia coli str. K-12 substr. MG1655 putative oxidoreductase NP_417897.1 3579768 R 511145 CDS NP_417898.1 16131313 947943 3581138..3581626 1 NC_000913.3 putative acetyltransferase 3581626 yhhY 947943 yhhY Escherichia coli str. K-12 substr. MG1655 putative acetyltransferase NP_417898.1 3581138 D 511145 CDS NP_417899.1 16131314 947952 3581863..3583041 1 NC_000913.3 putative Hcp1 family polymorphic toxin protein; putative colicin-like DNase/tRNase activity 3583041 yhhZ 947952 yhhZ Escherichia coli str. K-12 substr. MG1655 putative Hcp1 family polymorphic toxin protein; putative colicin-like DNase/tRNase activity NP_417899.1 3581863 D 511145 CDS b3443 947951 join(3583038..3583418,3584196..3584309) 1 NC_000913.3 pseudogene, interrupted by IS1E; <NULL_VALUE> 3584309 yrhA 947951 yrhA Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 3583038 D 511145 CDS NP_417901.1 16131316 947950 3583483..3583758 1 NC_000913.3 IS1 repressor TnpA 3583758 insA 947950 insA Escherichia coli str. K-12 substr. MG1655 IS1 repressor TnpA NP_417901.1 3583483 D 511145 CDS NP_417902.1 16131317 947949 3583677..3584180 1 NC_000913.3 IS1 transposase B 3584180 insB1 947949 insB1 Escherichia coli str. K-12 substr. MG1655 IS1 transposase B NP_417902.1 3583677 D 511145 CDS NP_417903.1 16131318 947948 3584759..3585043 1 NC_000913.3 stable heat shock chaperone 3585043 yrhB 947948 yrhB Escherichia coli str. K-12 substr. MG1655 stable heat shock chaperone NP_417903.1 3584759 D 511145 CDS NP_417904.1 16131319 947947 complement(3585081..3586823) 1 NC_000913.3 gamma-glutamyltranspeptidase 3586823 ggt 947947 ggt Escherichia coli str. K-12 substr. MG1655 gamma-glutamyltranspeptidase NP_417904.1 3585081 R 511145 CDS NP_417905.1 16131320 947956 3586943..3587383 1 NC_000913.3 DUF2756 family protein 3587383 yhhA 947956 yhhA Escherichia coli str. K-12 substr. MG1655 DUF2756 family protein NP_417905.1 3586943 D 511145 CDS NP_417906.1 16131321 947955 complement(3587370..3588113) 1 NC_000913.3 glycerophosphodiester phosphodiesterase, cytosolic 3588113 ugpQ 947955 ugpQ Escherichia coli str. K-12 substr. MG1655 glycerophosphodiester phosphodiesterase, cytosolic NP_417906.1 3587370 R 511145 CDS NP_417907.2 90111593 947953 complement(3588110..3589180) 1 NC_000913.3 ATP-binding component of sn-glycerol 3-phosphate transport system; glycerol-3-phosphate transporter subunit 3589180 ugpC 947953 ugpC Escherichia coli str. K-12 substr. MG1655 glycerol-3-phosphate transporter subunit NP_417907.2 3588110 R 511145 CDS NP_417908.1 16131323 947959 complement(3589182..3590027) 1 NC_000913.3 sn-glycerol 3-phosphate transport system, integral membrane protein; membrane component of ABC superfamily; glycerol-3-phosphate transporter subunit 3590027 ugpE 947959 ugpE Escherichia coli str. K-12 substr. MG1655 glycerol-3-phosphate transporter subunit NP_417908.1 3589182 R 511145 CDS NP_417909.1 16131324 947957 complement(3590024..3590911) 1 NC_000913.3 sn-glycerol 3-phosphate transport system, integral membrane protein; membrane component of ABC superfamily; glycerol-3-phosphate transporter subunit 3590911 ugpA 947957 ugpA Escherichia coli str. K-12 substr. MG1655 glycerol-3-phosphate transporter subunit NP_417909.1 3590024 R 511145 CDS NP_417910.1 16131325 947962 complement(3591009..3592325) 1 NC_000913.3 sn-glycerol 3-phosphate transport system; periplasmic binding protein; periplasmic-binding component of ABC superfamily; glycerol-3-phosphate transporter subunit 3592325 ugpB 947962 ugpB Escherichia coli str. K-12 substr. MG1655 glycerol-3-phosphate transporter subunit NP_417910.1 3591009 R 511145 CDS NP_417911.4 90111594 947961 complement(3592724..3593437) 1 NC_000913.3 ATP-binding component of leucine transport; leucine/isoleucine/valine transporter subunit 3593437 livF 947961 livF Escherichia coli str. K-12 substr. MG1655 leucine/isoleucine/valine transporter subunit NP_417911.4 3592724 R 511145 CDS NP_417912.1 16131327 947967 complement(3593439..3594206) 1 NC_000913.3 ATP-binding component of high-affinity branched-chain amino acid transport system; leucine/isoleucine/valine transporter subunit 3594206 livG 947967 livG Escherichia coli str. K-12 substr. MG1655 leucine/isoleucine/valine transporter subunit NP_417912.1 3593439 R 511145 CDS NP_417913.1 16131328 947966 complement(3594203..3595480) 1 NC_000913.3 high-affinity branched-chain amino acid transport; membrane component of ABC superfamily; leucine/isoleucine/valine transporter subunit 3595480 livM 947966 livM Escherichia coli str. K-12 substr. MG1655 leucine/isoleucine/valine transporter subunit NP_417913.1 3594203 R 511145 CDS NP_417914.1 16131329 947965 complement(3595477..3596403) 1 NC_000913.3 high-affinity branched-chain amino acid transport system; membrane component; membrane component of ABC superfamily; leucine/isoleucine/valine transporter subunit 3596403 livH 947965 livH Escherichia coli str. K-12 substr. MG1655 leucine/isoleucine/valine transporter subunit NP_417914.1 3595477 R 511145 CDS NP_417915.1 16131330 947964 complement(3596451..3597560) 1 NC_000913.3 high-affinity leucine-specific transport system; periplasmic binding protein; periplasmic-binding component of ABC superfamily; leucine transporter subunit 3597560 livK 947964 livK Escherichia coli str. K-12 substr. MG1655 leucine transporter subunit NP_417915.1 3596451 R 511145 CDS NP_417916.1 16131331 947963 3597984..3598367 1 NC_000913.3 PanD autocleavage accelerator, panothenate synthesis 3598367 panM 947963 panM Escherichia coli str. K-12 substr. MG1655 PanD autocleavage accelerator, panothenate synthesis NP_417916.1 3597984 D 511145 CDS YP_026223.1 49176358 947971 complement(3598555..3599658) 1 NC_000913.3 high-affinity branched-chain amino acid transport protein (ABC superfamily, peri_bind); periplasmic-binding component of ABC superfamily; leucine/isoleucine/valine transporter subunit 3599658 livJ 947971 livJ Escherichia coli str. K-12 substr. MG1655 leucine/isoleucine/valine transporter subunit YP_026223.1 3598555 R 511145 CDS NP_417918.1 16131333 947970 complement(3599929..3600783) 1 NC_000913.3 RNA polymerase, sigma(32) factor; regulation of proteins induced at high temperatures; RNA polymerase, sigma 32 (sigma H) factor 3600783 rpoH 947970 rpoH Escherichia coli str. K-12 substr. MG1655 RNA polymerase, sigma 32 (sigma H) factor NP_417918.1 3599929 R 511145 CDS NP_417919.1 16131334 947969 complement(3601028..3602086) 1 NC_000913.3 cell division membrane protein; inner membrane putative ABC superfamily transporter permease 3602086 ftsX 947969 ftsX Escherichia coli str. K-12 substr. MG1655 inner membrane putative ABC superfamily transporter permease NP_417919.1 3601028 R 511145 CDS NP_417920.1 16131335 947968 complement(3602079..3602747) 1 NC_000913.3 ATP-binding component of a membrane-associated complex involved in cell division; putative ABC superfamily transporter ATP-binding subunit 3602747 ftsE 947968 ftsE Escherichia coli str. K-12 substr. MG1655 putative ABC superfamily transporter ATP-binding subunit NP_417920.1 3602079 R 511145 CDS NP_417921.1 16131336 947978 complement(3602750..3604243) 1 NC_000913.3 cell division membrane protein; Signal Recognition Particle (SRP) receptor 3604243 ftsY 947978 ftsY Escherichia coli str. K-12 substr. MG1655 Signal Recognition Particle (SRP) receptor NP_417921.1 3602750 R 511145 CDS NP_417922.1 16131337 947977 3604393..3604989 1 NC_000913.3 16S rRNA m(2)G966 methyltransferase, SAM-dependent 3604989 rsmD 947977 rsmD Escherichia coli str. K-12 substr. MG1655 16S rRNA m(2)G966 methyltransferase, SAM-dependent NP_417922.1 3604393 D 511145 CDS NP_417923.1 16131338 947976 3604979..3605248 1 NC_000913.3 DUF1145 family protein 3605248 yhhL 947976 yhhL Escherichia coli str. K-12 substr. MG1655 DUF1145 family protein NP_417923.1 3604979 D 511145 CDS NP_417924.1 16131339 947975 complement(3605251..3605610) 1 NC_000913.3 putative receptor; DUF2500 family protein 3605610 yhhM 947975 yhhM Escherichia coli str. K-12 substr. MG1655 DUF2500 family protein NP_417924.1 3605251 R 511145 CDS NP_417925.1 16131340 947973 3605751..3606377 1 NC_000913.3 putative enzyme; TMEM86 family putative inner membrane protein 3606377 yhhN 947973 yhhN Escherichia coli str. K-12 substr. MG1655 TMEM86 family putative inner membrane protein NP_417925.1 3605751 D 511145 CDS NP_417926.1 16131341 947972 3606451..3608649 1 NC_000913.3 zinc-transporting ATPase; zinc, cobalt and lead efflux system 3608649 zntA 947972 zntA Escherichia coli str. K-12 substr. MG1655 zinc, cobalt and lead efflux system NP_417926.1 3606451 D 511145 CDS NP_417927.1 16131342 947974 complement(3608751..3608996) 1 NC_000913.3 small protein required for cell growth; affects RpoS stability; small ubiquitous RNA-binding protein required for normal growth, cytoplasmic; mnm(5)-s(2)U34-tRNA 2-thiolation sulfurtransferase 3608996 tusA 947974 tusA Escherichia coli str. K-12 substr. MG1655 mnm(5)-s(2)U34-tRNA 2-thiolation sulfurtransferase NP_417927.1 3608751 R 511145 CDS NP_417928.1 16131343 947984 3609217..3609882 1 NC_000913.3 DUF165 family inner membrane protein 3609882 yhhQ 947984 yhhQ Escherichia coli str. K-12 substr. MG1655 DUF165 family inner membrane protein NP_417928.1 3609217 D 511145 CDS NP_417929.4 90111595 947983 3609955..3610512 1 NC_000913.3 putative lipoprotein 3610512 dcrB 947983 dcrB Escherichia coli str. K-12 substr. MG1655 putative lipoprotein NP_417929.4 3609955 D 511145 CDS NP_417930.2 90111596 947982 complement(3610516..3611733) 1 NC_000913.3 putative transport; putative arabinose efflux transporter 3611733 yhhS 947982 yhhS Escherichia coli str. K-12 substr. MG1655 putative arabinose efflux transporter NP_417930.2 3610516 R 511145 CDS NP_417931.4 90111597 947980 3611865..3612914 1 NC_000913.3 UPF0118 family putative transporter 3612914 yhhT 947980 yhhT Escherichia coli str. K-12 substr. MG1655 UPF0118 family putative transporter NP_417931.4 3611865 D 511145 CDS NP_417932.1 16131347 947979 3612969..3613556 1 NC_000913.3 4'-phosphopantetheinyl transferase 3613556 acpT 947979 acpT Escherichia coli str. K-12 substr. MG1655 4'-phosphopantetheinyl transferase NP_417932.1 3612969 D 511145 CDS NP_417933.1 16131348 947981 3613667..3615241 1 NC_000913.3 periplasmic binding protein for nickel; periplasmic-binding component of ABC superfamily; nickel-binding, heme-binding periplasmic protein 3615241 nikA 947981 nikA Escherichia coli str. K-12 substr. MG1655 nickel-binding, heme-binding periplasmic protein NP_417933.1 3613667 D 511145 CDS NP_417934.1 16131349 947986 3615241..3616185 1 NC_000913.3 transport of nickel, membrane protein; membrane component of ABC superfamily; nickel transporter subunit 3616185 nikB 947986 nikB Escherichia coli str. K-12 substr. MG1655 nickel transporter subunit NP_417934.1 3615241 D 511145 CDS NP_417935.1 16131350 947990 3616182..3617015 1 NC_000913.3 transport of nickel, membrane protein; membrane component of ABC superfamily; nickel transporter subunit 3617015 nikC 947990 nikC Escherichia coli str. K-12 substr. MG1655 nickel transporter subunit NP_417935.1 3616182 D 511145 CDS NP_417936.1 16131351 947989 3617015..3617779 1 NC_000913.3 ATP-binding protein of nickel transport system; ATP-binding component of ABC superfamily; nickel transporter subunit 3617779 nikD 947989 nikD Escherichia coli str. K-12 substr. MG1655 nickel transporter subunit NP_417936.1 3617015 D 511145 CDS NP_417937.1 16131352 947987 3617776..3618582 1 NC_000913.3 ATP-binding protein of nickel transport system; ATP-binding component of ABC superfamily; nickel transporter subunit 3618582 nikE 947987 nikE Escherichia coli str. K-12 substr. MG1655 nickel transporter subunit NP_417937.1 3617776 D 511145 CDS NP_417938.1 16131353 947995 3618588..3618989 1 NC_000913.3 transcriptional repressor, Ni-binding 3618989 nikR 947995 nikR Escherichia coli str. K-12 substr. MG1655 transcriptional repressor, Ni-binding NP_417938.1 3618588 D 511145 CDS YP_026224.1 49176361 947994 3619192..3623427 1 NC_000913.3 rhsB protein in rhs element; Rhs family putative polymorphic toxin, putative neighboring cell growth inhibitor 3623427 rhsB 947994 rhsB Escherichia coli str. K-12 substr. MG1655 Rhs family putative polymorphic toxin, putative neighboring cell growth inhibitor YP_026224.1 3619192 D 511145 CDS NP_417940.2 90111598 947993 3623399..3623782 1 NC_000913.3 putative immunity protein for putative polymorphic toxin RhsB 3623782 yhhH 947993 yhhH Escherichia coli str. K-12 substr. MG1655 putative immunity protein for putative polymorphic toxin RhsB NP_417940.2 3623399 D 511145 CDS b4552 1450291 3623887..3624237 1 NC_000913.3 pseudogene fragment; <NULL_VALUE> 3624237 yrhC 1450291 yrhC Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 3623887 D 511145 CDS NP_417941.1 16131356 947992 3624378..3625514 1 NC_000913.3 putative receptor; putative transposase 3625514 yhhI 947992 yhhI Escherichia coli str. K-12 substr. MG1655 putative transposase NP_417941.1 3624378 D 511145 CDS NP_417942.6 226524752 947991 complement(3625679..3626803) 1 NC_000913.3 putative transporter; inner membrane putative ABC transporter permease 3626803 yhhJ 947991 yhhJ Escherichia coli str. K-12 substr. MG1655 inner membrane putative ABC transporter permease NP_417942.6 3625679 R 511145 CDS YP_026225.1 49176363 947998 complement(3626803..3629538) 1 NC_000913.3 ribosome-associated ATPase, ATP-binding domain (N-terminal); ribosome-associated ATPase: ATP-binding protein/ATP-binding membrane protein 3629538 rbbA 947998 rbbA Escherichia coli str. K-12 substr. MG1655 ribosome-associated ATPase: ATP-binding protein/ATP-binding membrane protein YP_026225.1 3626803 R 511145 CDS NP_417944.1 16131359 948003 complement(3629535..3630602) 1 NC_000913.3 putative membrane protein; putative membrane fusion protein (MFP) of efflux pump 3630602 yhiI 948003 yhiI Escherichia coli str. K-12 substr. MG1655 putative membrane fusion protein (MFP) of efflux pump NP_417944.1 3629535 R 511145 CDS NP_417945.1 16131360 948001 complement(3630968..3632590) 1 NC_000913.3 DUF4049 family protein 3632590 yhiJ 948001 yhiJ Escherichia coli str. K-12 substr. MG1655 DUF4049 family protein NP_417945.1 3630968 R 511145 CDS b4660 947999 complement(join(3632852..3633265,3633265..3634458)) 1 NC_000913.3 pseudogene, DUF4049 family protein; <NULL_VALUE> 3634458 yhiL 947999 yhiL Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 3632852 R 511145 CDS NP_417948.4 226524753 947997 3634841..3635893 1 NC_000913.3 acid resistance protein, inner membrane 3635893 yhiM 947997 yhiM Escherichia coli str. K-12 substr. MG1655 acid resistance protein, inner membrane NP_417948.4 3634841 D 511145 CDS NP_417949.1 16131364 947996 complement(3636208..3637410) 1 NC_000913.3 putative oxidoreductase 3637410 yhiN 947996 yhiN Escherichia coli str. K-12 substr. MG1655 putative oxidoreductase NP_417949.1 3636208 R 511145 CDS NP_417950.1 16131365 948009 3637642..3639141 1 NC_000913.3 low-affinity phosphate transport; phosphate transporter, low-affinity; tellurite importer 3639141 pitA 948009 pitA Escherichia coli str. K-12 substr. MG1655 phosphate transporter, low-affinity; tellurite importer NP_417950.1 3637642 D 511145 CDS NP_417951.1 16131366 948008 complement(3639385..3639720) 1 NC_000913.3 universal stress (ethanol tolerance) protein B 3639720 uspB 948008 uspB Escherichia coli str. K-12 substr. MG1655 universal stress (ethanol tolerance) protein B NP_417951.1 3639385 R 511145 CDS NP_417952.1 16131367 948007 3640111..3640545 1 NC_000913.3 universal stress protein; broad regulatory function?; universal stress global response regulator 3640545 uspA 948007 uspA Escherichia coli str. K-12 substr. MG1655 universal stress global response regulator NP_417952.1 3640111 D 511145 CDS NP_417953.1 16131368 948006 3640862..3642331 1 NC_000913.3 putative transport protein; dipeptide and tripeptide permease B 3642331 dtpB 948006 dtpB Escherichia coli str. K-12 substr. MG1655 dipeptide and tripeptide permease B NP_417953.1 3640862 D 511145 CDS NP_417954.1 16131369 948005 complement(3642380..3643132) 1 NC_000913.3 16S rRNA m(2)G1516 methyltransferase, SAM-dependent 3643132 rsmJ 948005 rsmJ Escherichia coli str. K-12 substr. MG1655 16S rRNA m(2)G1516 methyltransferase, SAM-dependent NP_417954.1 3642380 R 511145 CDS NP_417955.1 16131370 948016 complement(3643140..3645182) 1 NC_000913.3 oligopeptidase A 3645182 prlC 948016 prlC Escherichia coli str. K-12 substr. MG1655 oligopeptidase A NP_417955.1 3643140 R 511145 CDS NP_417956.1 16131371 948012 3645385..3646227 1 NC_000913.3 23S rRNA m(6)A2030 methyltransferase, SAM-dependent 3646227 rlmJ 948012 rlmJ Escherichia coli str. K-12 substr. MG1655 23S rRNA m(6)A2030 methyltransferase, SAM-dependent NP_417956.1 3645385 D 511145 CDS NP_417957.1 16131372 948014 3646299..3647651 1 NC_000913.3 glutathione oxidoreductase 3647651 gor 948014 gor Escherichia coli str. K-12 substr. MG1655 glutathione oxidoreductase NP_417957.1 3646299 D 511145 CDS YP_001165328.2 635341466 5061522 complement(3647705..3647788) 1 NC_000913.3 UV-inducible membrane toxin, DinQ-AgrB type I toxin-antitoxin system 3647788 dinQ 5061522 dinQ Escherichia coli str. K-12 substr. MG1655 UV-inducible membrane toxin, DinQ-AgrB type I toxin-antitoxin system YP_001165328.2 3647705 R 511145 CDS NP_417958.1 16131373 948013 3648528..3648881 1 NC_000913.3 transcriptional repressor of chromosomal ars operon; arsenical resistance operon transcriptional repressor; autorepressor 3648881 arsR 948013 arsR Escherichia coli str. K-12 substr. MG1655 arsenical resistance operon transcriptional repressor; autorepressor NP_417958.1 3648528 D 511145 CDS NP_417959.4 90111602 948011 3648935..3650224 1 NC_000913.3 arsenical pump membrane protein; arsenite/antimonite transporter 3650224 arsB 948011 arsB Escherichia coli str. K-12 substr. MG1655 arsenite/antimonite transporter NP_417959.4 3648935 D 511145 CDS NP_417960.1 16131375 948018 3650237..3650662 1 NC_000913.3 arsenate reductase 3650662 arsC 948018 arsC Escherichia coli str. K-12 substr. MG1655 arsenate reductase NP_417960.1 3650237 D 511145 CDS b3504 948017 join(3651291..3652031,3653231..3653713) 1 NC_000913.3 pseudogene; <NULL_VALUE> 3653713 yhiS 948017 yhiS Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 3651291 D 511145 CDS NP_417962.1 16131377 948015 complement(3652182..3653198) 1 NC_000913.3 IS5 transposase and trans-activator 3653198 insH1 948015 insH1 Escherichia coli str. K-12 substr. MG1655 IS5 transposase and trans-activator NP_417962.1 3652182 R 511145 CDS NP_417963.4 90111603 948022 3653961..3654527 1 NC_000913.3 outer membrane protein induced after carbon starvation; outer membrane lipoprotein 3654527 slp 948022 slp Escherichia coli str. K-12 substr. MG1655 outer membrane lipoprotein NP_417963.4 3653961 D 511145 CDS NP_417964.1 16131379 948021 3654683..3655213 1 NC_000913.3 LuxR family putative transcriptional regulator 3655213 dctR 948021 dctR Escherichia coli str. K-12 substr. MG1655 LuxR family putative transcriptional regulator NP_417964.1 3654683 D 511145 CDS NP_417965.1 16131380 948019 complement(3655255..3655902) 1 NC_000913.3 putative transport ATPase; putative Mg(2+) transport ATPase, inner membrane protein 3655902 yhiD 948019 yhiD Escherichia coli str. K-12 substr. MG1655 putative Mg(2+) transport ATPase, inner membrane protein NP_417965.1 3655255 R 511145 CDS NP_417966.4 162135912 948026 complement(3655966..3656292) 1 NC_000913.3 acid-resistance protein 3656292 hdeB 948026 hdeB Escherichia coli str. K-12 substr. MG1655 acid-resistance protein NP_417966.4 3655966 R 511145 CDS NP_417967.1 16131382 948025 complement(3656408..3656740) 1 NC_000913.3 stress response protein acid-resistance protein 3656740 hdeA 948025 hdeA Escherichia coli str. K-12 substr. MG1655 stress response protein acid-resistance protein NP_417967.1 3656408 R 511145 CDS NP_417968.1 16131383 948024 3656995..3657567 1 NC_000913.3 acid-resistance membrane protein 3657567 hdeD 948024 hdeD Escherichia coli str. K-12 substr. MG1655 acid-resistance membrane protein NP_417968.1 3656995 D 511145 CDS NP_417969.1 16131384 948023 3658366..3658893 1 NC_000913.3 gad regulon transcriptional activator 3658893 gadE 948023 gadE Escherichia coli str. K-12 substr. MG1655 gad regulon transcriptional activator NP_417969.1 3658366 D 511145 CDS NP_417970.1 16131385 948031 3659232..3660389 1 NC_000913.3 putative membrane protein; anaerobic multidrug efflux transporter, ArcA-regulated 3660389 mdtE 948031 mdtE Escherichia coli str. K-12 substr. MG1655 anaerobic multidrug efflux transporter, ArcA-regulated NP_417970.1 3659232 D 511145 CDS NP_417971.1 16131386 948030 3660414..3663527 1 NC_000913.3 putative transport system permease protein; anaerobic multidrug efflux transporter, ArcA-regulated 3663527 mdtF 948030 mdtF Escherichia coli str. K-12 substr. MG1655 anaerobic multidrug efflux transporter, ArcA-regulated NP_417971.1 3660414 D 511145 CDS NP_417972.1 16131387 948029 complement(3663890..3664618) 1 NC_000913.3 putative ARAC-type regulatory protein; transcriptional activator of gadA and gadBC; repressor of gadX 3664618 gadW 948029 gadW Escherichia coli str. K-12 substr. MG1655 transcriptional activator of gadA and gadBC; repressor of gadX NP_417972.1 3663890 R 511145 CDS NP_417973.1 16131388 948028 complement(3664986..3665810) 1 NC_000913.3 acid resistance regulon transcriptional activator; autoactivator 3665810 gadX 948028 gadX Escherichia coli str. K-12 substr. MG1655 acid resistance regulon transcriptional activator; autoactivator NP_417973.1 3664986 R 511145 CDS NP_417974.1 16131389 948027 complement(3666180..3667580) 1 NC_000913.3 glutamate decarboxylase isozyme; glutamate decarboxylase A, PLP-dependent 3667580 gadA 948027 gadA Escherichia coli str. K-12 substr. MG1655 glutamate decarboxylase A, PLP-dependent NP_417974.1 3666180 R 511145 CDS NP_417975.1 16131390 948038 complement(3667791..3669188) 1 NC_000913.3 putative cytochrome C peroxidase 3669188 yhjA 948038 yhjA Escherichia coli str. K-12 substr. MG1655 putative cytochrome C peroxidase NP_417975.1 3667791 R 511145 CDS NP_417976.1 16131391 948037 3669592..3671241 1 NC_000913.3 cytoplasmic trehalase 3671241 treF 948037 treF Escherichia coli str. K-12 substr. MG1655 cytoplasmic trehalase NP_417976.1 3669592 D 511145 CDS NP_417977.1 16131392 948036 complement(3671292..3671894) 1 NC_000913.3 putative regulator; putative DNA-binding transcriptional response regulator 3671894 yhjB 948036 yhjB Escherichia coli str. K-12 substr. MG1655 putative DNA-binding transcriptional response regulator NP_417977.1 3671292 R 511145 CDS NP_417978.2 145698322 948035 3672414..3673313 1 NC_000913.3 putative transcriptional regulator LYSR-type; LysR family putative transcriptional regulator 3673313 yhjC 948035 yhjC Escherichia coli str. K-12 substr. MG1655 LysR family putative transcriptional regulator NP_417978.2 3672414 D 511145 CDS NP_417979.1 16131394 948033 3673362..3674375 1 NC_000913.3 inner membrane putative BrbK family alternate lipid exporter 3674375 yhjD 948033 yhjD Escherichia coli str. K-12 substr. MG1655 inner membrane putative BrbK family alternate lipid exporter NP_417979.1 3673362 D 511145 CDS NP_417980.1 16131395 948032 3674786..3676108 1 NC_000913.3 putative transport protein; MFS superfamily sugar transport 1 family protein 3676108 yhjE 948032 yhjE Escherichia coli str. K-12 substr. MG1655 MFS superfamily sugar transport 1 family protein NP_417980.1 3674786 D 511145 CDS NP_417981.2 226524754 948043 complement(3676290..3678350) 1 NC_000913.3 putative inner membrane-anchored periplasmic AsmA family protein 3678350 yhjG 948043 yhjG Escherichia coli str. K-12 substr. MG1655 putative inner membrane-anchored periplasmic AsmA family protein NP_417981.2 3676290 R 511145 CDS NP_417982.2 90111605 948042 complement(3678420..3679187) 1 NC_000913.3 cyclic-di-GMP phosphodiesterase, FlhDC-regulated 3679187 yhjH 948042 yhjH Escherichia coli str. K-12 substr. MG1655 cyclic-di-GMP phosphodiesterase, FlhDC-regulated NP_417982.2 3678420 R 511145 CDS NP_417983.2 90111606 948041 3679419..3680348 1 NC_000913.3 2-dehydro-3-deoxygluconokinase 3680348 kdgK 948041 kdgK Escherichia coli str. K-12 substr. MG1655 2-dehydro-3-deoxygluconokinase NP_417983.2 3679419 D 511145 CDS NP_417984.1 16131399 948040 complement(3680444..3681940) 1 NC_000913.3 putative periplasmic M16 family chaperone 3681940 yhjJ 948040 yhjJ Escherichia coli str. K-12 substr. MG1655 putative periplasmic M16 family chaperone NP_417984.1 3680444 R 511145 CDS NP_417985.1 16131400 948039 complement(3682161..3683447) 1 NC_000913.3 uptake of C4-dicarboxylic acids; C4-dicarboxylic acid, orotate and citrate transporter 3683447 dctA 948039 dctA Escherichia coli str. K-12 substr. MG1655 C4-dicarboxylic acid, orotate and citrate transporter NP_417985.1 3682161 R 511145 CDS NP_417986.4 226524755 948048 complement(3683630..3685618) 1 NC_000913.3 cyclic-di-GMP phosphodiesterase 3685618 yhjK 948048 yhjK Escherichia coli str. K-12 substr. MG1655 cyclic-di-GMP phosphodiesterase NP_417986.4 3683630 R 511145 CDS YP_026226.4 226524756 948047 complement(3685700..3689173) 1 NC_000913.3 putative oxidoreductase subunit; cellulose synthase subunit 3689173 bcsC 948047 bcsC Escherichia coli str. K-12 substr. MG1655 cellulose synthase subunit YP_026226.4 3685700 R 511145 CDS NP_417988.1 16131403 948046 complement(3689155..3690261) 1 NC_000913.3 endo-1,4-D-glucanase 3690261 bcsZ 948046 bcsZ Escherichia coli str. K-12 substr. MG1655 endo-1,4-D-glucanase NP_417988.1 3689155 R 511145 CDS NP_417989.1 16131404 948045 complement(3690268..3692607) 1 NC_000913.3 regulator of cellulose synthase, cyclic di-GMP binding 3692607 bcsB 948045 bcsB Escherichia coli str. K-12 substr. MG1655 regulator of cellulose synthase, cyclic di-GMP binding NP_417989.1 3690268 R 511145 CDS NP_417990.4 90111609 948053 complement(3692618..3695236) 1 NC_000913.3 putative cellulose synthase; cellulose synthase, catalytic subunit 3695236 bcsA 948053 bcsA Escherichia coli str. K-12 substr. MG1655 cellulose synthase, catalytic subunit NP_417990.4 3692618 R 511145 CDS b3534 948052 complement(3695233..3695985) 1 NC_000913.3 involved in cellulose production, minD superfamily (pseudogene); <NULL_VALUE> 3695985 bcsQ 948052 bcsQ Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 3695233 R 511145 CDS NP_417992.1 16131407 948051 complement(3695997..3696185) 1 NC_000913.3 DUF2629 family protein 3696185 yhjR 948051 yhjR Escherichia coli str. K-12 substr. MG1655 DUF2629 family protein NP_417992.1 3695997 R 511145 CDS NP_417993.1 16131408 948050 3696458..3698029 1 NC_000913.3 conserved hypothetical protein; Salmonella ortholog implicated in the biosynthesis of cellulose, although the precise role remains unclear; cellulose production protein 3698029 bcsE 948050 bcsE Escherichia coli str. K-12 substr. MG1655 cellulose production protein NP_417993.1 3696458 D 511145 CDS NP_417994.2 90111610 948059 3698026..3698217 1 NC_000913.3 DUF2636 family small membrane protein associated with cellulose production 3698217 bcsF 948059 bcsF Escherichia coli str. K-12 substr. MG1655 DUF2636 family small membrane protein associated with cellulose production NP_417994.2 3698026 D 511145 CDS NP_417995.1 16131410 948058 3698214..3699893 1 NC_000913.3 DUF3260 family inner membrane protein associated with cellulose production 3699893 bcsG 948058 bcsG Escherichia coli str. K-12 substr. MG1655 DUF3260 family inner membrane protein associated with cellulose production NP_417995.1 3698214 D 511145 CDS YP_026227.1 49176368 2847730 complement(3699980..3700087) 1 NC_000913.3 small toxic polypeptide; toxic polypeptide, small 3700087 ldrD 2847730 ldrD Escherichia coli str. K-12 substr. MG1655 toxic polypeptide, small YP_026227.1 3699980 R 511145 CDS NP_417996.1 16131411 948057 3700563..3701834 1 NC_000913.3 putative transporter protein; putative transporter 3701834 yhjV 948057 yhjV Escherichia coli str. K-12 substr. MG1655 putative transporter NP_417996.1 3700563 D 511145 CDS NP_417997.1 16131412 948056 complement(3701864..3702868) 1 NC_000913.3 putative ATP-binding component of dipeptide transport system; dipeptide transporter 3702868 dppF 948056 dppF Escherichia coli str. K-12 substr. MG1655 dipeptide transporter NP_417997.1 3701864 R 511145 CDS NP_417998.1 16131413 948065 complement(3702865..3703848) 1 NC_000913.3 putative ATP-binding component of dipeptide transport system; dipeptide/heme transporter 3703848 dppD 948065 dppD Escherichia coli str. K-12 substr. MG1655 dipeptide/heme transporter NP_417998.1 3702865 R 511145 CDS NP_417999.1 16131414 948064 complement(3703859..3704761) 1 NC_000913.3 dipeptide transport system permease protein 2; membrane component of ABC superfamily; dipeptide/heme transporter 3704761 dppC 948064 dppC Escherichia coli str. K-12 substr. MG1655 dipeptide/heme transporter NP_417999.1 3703859 R 511145 CDS NP_418000.1 16131415 948063 complement(3704771..3705790) 1 NC_000913.3 dipeptide transport system permease protein 1; membrane component of ABC superfamily; dipeptide/heme transporter 3705790 dppB 948063 dppB Escherichia coli str. K-12 substr. MG1655 dipeptide/heme transporter NP_418000.1 3704771 R 511145 CDS NP_418001.1 16131416 948062 complement(3706098..3707705) 1 NC_000913.3 dipeptide transport protein; periplasmic-binding component of ABC superfamily; dipeptide transporter 3707705 dppA 948062 dppA Escherichia coli str. K-12 substr. MG1655 dipeptide transporter NP_418001.1 3706098 R 511145 CDS NP_418002.2 90111611 948068 complement(3708784..3710475) 1 NC_000913.3 KDO phosphoethanolamine transferase, Ca(2+)-inducible 3710475 eptB 948068 eptB Escherichia coli str. K-12 substr. MG1655 KDO phosphoethanolamine transferase, Ca(2+)-inducible NP_418002.2 3708784 R 511145 CDS NP_418003.1 16131418 948066 complement(3710799..3712007) 1 NC_000913.3 putative resistance protein; pyruvate-inducible inner membrane protein, putative transporter 3712007 yhjX 948066 yhjX Escherichia coli str. K-12 substr. MG1655 pyruvate-inducible inner membrane protein, putative transporter NP_418003.1 3710799 R 511145 CDS NP_418004.4 90111612 948073 complement(3712236..3712934) 1 NC_000913.3 putative lipase; autotransporter beta-domain protein 3712934 yhjY 948073 yhjY Escherichia coli str. K-12 substr. MG1655 autotransporter beta-domain protein NP_418004.4 3712236 R 511145 CDS NP_418005.1 16131420 947137 3713092..3713655 1 NC_000913.3 3-methyl-adenine DNA glycosylase I, constitutive 3713655 tag 947137 tag Escherichia coli str. K-12 substr. MG1655 3-methyl-adenine DNA glycosylase I, constitutive NP_418005.1 3713092 D 511145 CDS NP_418006.1 16131421 946460 3713652..3714092 1 NC_000913.3 putative acyl-CoA transferase 3714092 yiaC 946460 yiaC Escherichia coli str. K-12 substr. MG1655 putative acyl-CoA transferase NP_418006.1 3713652 D 511145 CDS NP_418007.3 145698325 946915 complement(3714061..3716394) 1 NC_000913.3 biotin sulfoxide reductase 3716394 bisC 946915 bisC Escherichia coli str. K-12 substr. MG1655 biotin sulfoxide reductase NP_418007.3 3714061 R 511145 CDS YP_026228.1 49176370 948075 3716547..3717206 1 NC_000913.3 putative outer membrane protein; multicopy suppressor of bamB; outer membrane lipoprotein 3717206 yiaD 948075 yiaD Escherichia coli str. K-12 substr. MG1655 multicopy suppressor of bamB; outer membrane lipoprotein YP_026228.1 3716547 D 511145 CDS NP_418009.2 90111614 948074 3717310..3718284 1 NC_000913.3 glyoxylate/hydroxypyruvate reductase B 3718284 ghrB 948074 ghrB Escherichia coli str. K-12 substr. MG1655 glyoxylate/hydroxypyruvate reductase B NP_418009.2 3717310 D 511145 CDS NP_418010.2 90111615 948072 complement(3718334..3719044) 1 NC_000913.3 barrier effect co-colonization resistance factor; DUF3053 family lipoprotein 3719044 yiaF 948072 yiaF Escherichia coli str. K-12 substr. MG1655 barrier effect co-colonization resistance factor; DUF3053 family lipoprotein NP_418010.2 3718334 R 511145 CDS NP_418011.1 16131426 948071 3719478..3719768 1 NC_000913.3 HTH_CROC1 family putative transcriptional regulator 3719768 yiaG 948071 yiaG Escherichia coli str. K-12 substr. MG1655 HTH_CROC1 family putative transcriptional regulator NP_418011.1 3719478 D 511145 CDS NP_418012.1 16131427 948070 3720049..3720261 1 NC_000913.3 cold shock protein 7.4, transcriptional activator of hns; RNA chaperone and antiterminator, cold-inducible 3720261 cspA 948070 cspA Escherichia coli str. K-12 substr. MG1655 RNA chaperone and antiterminator, cold-inducible NP_418012.1 3720049 D 511145 CDS b4647 5625573 complement(3720448..3720632) 1 NC_000913.3 pseudogene, overlapping regulatory peptide, enables hokB; completely contained in another CDS; <NULL_VALUE> 3720632 mokA 5625573 mokA Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 3720448 R 511145 CDS YP_026229.1 49176371 2847732 complement(3720448..3720600) 1 NC_000913.3 small toxic membrane polypeptide; IS150 insertion and apparent 39 bp deletion disrupt the associated mokA and sokA genes; completely contained in another CDS; toxic polypeptide, small 3720600 hokA 2847732 hokA Escherichia coli str. K-12 substr. MG1655 toxic polypeptide, small YP_026229.1 3720448 R 511145 CDS NP_418014.1 16131428 948082 3720680..3721201 1 NC_000913.3 IS150 transposase A 3721201 insJ 948082 insJ Escherichia coli str. K-12 substr. MG1655 IS150 transposase A NP_418014.1 3720680 D 511145 CDS NP_418015.1 16131429 948081 3721198..3722049 1 NC_000913.3 IS150 transposase B 3722049 insK 948081 insK Escherichia coli str. K-12 substr. MG1655 IS150 transposase B NP_418015.1 3721198 D 511145 CDS NP_418016.1 16131430 948080 complement(3722328..3724397) 1 NC_000913.3 glycine tRNA synthetase, beta subunit 3724397 glyS 948080 glyS Escherichia coli str. K-12 substr. MG1655 glycine tRNA synthetase, beta subunit NP_418016.1 3722328 R 511145 CDS NP_418017.1 16131431 948079 complement(3724407..3725318) 1 NC_000913.3 glycine tRNA synthetase, alpha subunit 3725318 glyQ 948079 glyQ Escherichia coli str. K-12 substr. MG1655 glycine tRNA synthetase, alpha subunit NP_418017.1 3724407 R 511145 CDS YP_588469.1 94541126 1450292 complement(3725413..3725712) 1 NC_000913.3 uncharacterized protein 3725712 ysaB 1450292 ysaB Escherichia coli str. K-12 substr. MG1655 uncharacterized protein YP_588469.1 3725413 R 511145 CDS NP_418018.1 16131432 948077 3725887..3726882 1 NC_000913.3 O-acetyltransferase for enterobacterial common antigen (ECA) 3726882 wecH 948077 wecH Escherichia coli str. K-12 substr. MG1655 O-acetyltransferase for enterobacterial common antigen (ECA) NP_418018.1 3725887 D 511145 CDS NP_418019.4 90111616 948078 complement(3726924..3727361) 1 NC_000913.3 YiaAB family inner membrane protein, tandem domains 3727361 yiaA 948078 yiaA Escherichia coli str. K-12 substr. MG1655 YiaAB family inner membrane protein, tandem domains NP_418019.4 3726924 R 511145 CDS NP_418020.2 90111617 948152 complement(3727407..3727748) 1 NC_000913.3 YiaAB family inner membrane protein 3727748 yiaB 948152 yiaB Escherichia coli str. K-12 substr. MG1655 YiaAB family inner membrane protein NP_418020.2 3727407 R 511145 CDS NP_418021.1 16131435 948133 complement(3727917..3729371) 1 NC_000913.3 xylulokinase 3729371 xylB 948133 xylB Escherichia coli str. K-12 substr. MG1655 xylulokinase NP_418021.1 3727917 R 511145 CDS NP_418022.1 16131436 948141 complement(3729443..3730765) 1 NC_000913.3 D-xylose isomerase 3730765 xylA 948141 xylA Escherichia coli str. K-12 substr. MG1655 D-xylose isomerase NP_418022.1 3729443 R 511145 CDS NP_418023.1 16131437 948090 3731131..3732123 1 NC_000913.3 xylose binding protein transport system; periplasmic-binding component of ABC superfamily; D-xylose transporter subunit 3732123 xylF 948090 xylF Escherichia coli str. K-12 substr. MG1655 D-xylose transporter subunit NP_418023.1 3731131 D 511145 CDS NP_418024.1 16131438 948127 3732201..3733742 1 NC_000913.3 putative ATP-binding protein of xylose transport system; fused D-xylose transporter subunits of ABC superfamily: ATP-binding components 3733742 xylG 948127 xylG Escherichia coli str. K-12 substr. MG1655 fused D-xylose transporter subunits of ABC superfamily: ATP-binding components NP_418024.1 3732201 D 511145 CDS NP_418025.1 16131439 948083 3733720..3734901 1 NC_000913.3 putative xylose transport, membrane component; membrane component of ABC superfamily; D-xylose ABC transporter permease subunit 3734901 xylH 948083 xylH Escherichia coli str. K-12 substr. MG1655 D-xylose ABC transporter permease subunit NP_418025.1 3733720 D 511145 CDS NP_418026.1 16131440 948086 3734979..3736157 1 NC_000913.3 putative regulator of xyl operon; xylose divergent operon transcriptional activator 3736157 xylR 948086 xylR Escherichia coli str. K-12 substr. MG1655 xylose divergent operon transcriptional activator NP_418026.1 3734979 D 511145 CDS YP_026230.1 49176373 948089 complement(3736353..3737177) 1 NC_000913.3 putative ATP-binding protein; putative glucosaminidase 3737177 bax 948089 bax Escherichia coli str. K-12 substr. MG1655 putative glucosaminidase YP_026230.1 3736353 R 511145 CDS NP_418028.1 16131442 948088 3737497..3739527 1 NC_000913.3 alpha-amylase 3739527 malS 948088 malS Escherichia coli str. K-12 substr. MG1655 alpha-amylase NP_418028.1 3737497 D 511145 CDS YP_026231.1 49176374 948087 3739705..3740958 1 NC_000913.3 alanine-alpha-ketoisovalerate (or valine-pyruvate) transaminase, transaminase C; valine-pyruvate aminotransferase 1 3740958 avtA 948087 avtA Escherichia coli str. K-12 substr. MG1655 valine-pyruvate aminotransferase 1 YP_026231.1 3739705 D 511145 CDS NP_418030.1 16131444 948085 complement(3741109..3741582) 1 NC_000913.3 putative hydrogenase, 4Fe-4S ferredoxin-type component 3741582 ysaA 948085 ysaA Escherichia coli str. K-12 substr. MG1655 putative hydrogenase, 4Fe-4S ferredoxin-type component NP_418030.1 3741109 R 511145 CDS NP_418031.1 16131445 948084 complement(3741684..3742532) 1 NC_000913.3 transcriptional repressor of yiaK-S operon 3742532 yiaJ 948084 yiaJ Escherichia coli str. K-12 substr. MG1655 transcriptional repressor of yiaK-S operon NP_418031.1 3741684 R 511145 CDS NP_418032.1 16131446 948096 3742733..3743731 1 NC_000913.3 putative dehydrogenase; 2,3-diketo-L-gulonate reductase, NADH-dependent 3743731 yiaK 948096 yiaK Escherichia coli str. K-12 substr. MG1655 2,3-diketo-L-gulonate reductase, NADH-dependent NP_418032.1 3742733 D 511145 CDS NP_418033.1 16131447 948094 3743743..3744210 1 NC_000913.3 putative lipase; DUF386 family protein 3744210 yiaL 948094 yiaL Escherichia coli str. K-12 substr. MG1655 DUF386 family protein NP_418033.1 3743743 D 511145 CDS NP_418034.1 16131448 948093 3744328..3744801 1 NC_000913.3 2,3-diketo-L-gulonate TRAP transporter small permease protein 3744801 yiaM 948093 yiaM Escherichia coli str. K-12 substr. MG1655 2,3-diketo-L-gulonate TRAP transporter small permease protein NP_418034.1 3744328 D 511145 CDS YP_026232.1 49176375 948092 3744804..3746081 1 NC_000913.3 putative membrane protein; 2,3-diketo-L-gulonate TRAP transporter large permease protein 3746081 yiaN 948092 yiaN Escherichia coli str. K-12 substr. MG1655 2,3-diketo-L-gulonate TRAP transporter large permease protein YP_026232.1 3744804 D 511145 CDS NP_418036.1 16131450 948091 3746094..3747080 1 NC_000913.3 putative solute-binding transport protein; 2,3-diketo-L-gulonate-binding periplasmic protein 3747080 yiaO 948091 yiaO Escherichia coli str. K-12 substr. MG1655 2,3-diketo-L-gulonate-binding periplasmic protein NP_418036.1 3746094 D 511145 CDS NP_418037.1 16131451 948101 3747084..3748580 1 NC_000913.3 L-xylulose kinase, cryptic; L-xylulose kinase 3748580 lyxK 948101 lyxK Escherichia coli str. K-12 substr. MG1655 L-xylulose kinase NP_418037.1 3747084 D 511145 CDS NP_418038.1 16131452 948098 3748577..3749239 1 NC_000913.3 probable 3-hexulose 6-phosphate synthase; 3-keto-L-gulonate 6-phosphate decarboxylase 3749239 sgbH 948098 sgbH Escherichia coli str. K-12 substr. MG1655 3-keto-L-gulonate 6-phosphate decarboxylase NP_418038.1 3748577 D 511145 CDS NP_418039.2 90111618 948100 3749232..3750092 1 NC_000913.3 putative L-xylulose 5-phosphate 3-epimerase 3750092 sgbU 948100 sgbU Escherichia coli str. K-12 substr. MG1655 putative L-xylulose 5-phosphate 3-epimerase NP_418039.2 3749232 D 511145 CDS NP_418040.1 16131454 948099 3750086..3750781 1 NC_000913.3 L-ribulose-5-phosphate 4-epimerase 3750781 sgbE 948099 sgbE Escherichia coli str. K-12 substr. MG1655 L-ribulose-5-phosphate 4-epimerase NP_418040.1 3750086 D 511145 CDS b4648 5625574 complement(3750813..3750914) 1 NC_000913.3 pseudogene; <NULL_VALUE> 3750914 ysaC 5625574 ysaC Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 3750813 R 511145 CDS b4649 5625575 3750918..3751109 1 NC_000913.3 pseudogene, internal sequence remnant; <NULL_VALUE> 3751109 ysaD 5625575 ysaD Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 3750918 D 511145 CDS NP_418041.1 16131455 948097 complement(3751128..3751868) 1 NC_000913.3 putative outer membrane protein 3751868 yiaT 948097 yiaT Escherichia coli str. K-12 substr. MG1655 putative outer membrane protein NP_418041.1 3751128 R 511145 CDS NP_418042.1 16131456 948107 3751992..3752966 1 NC_000913.3 putative transcriptional regulator LYSR-type; putative DNA-binding transcriptional regulator 3752966 yiaU 948107 yiaU Escherichia coli str. K-12 substr. MG1655 putative DNA-binding transcriptional regulator NP_418042.1 3751992 D 511145 CDS NP_418043.1 16131457 948106 complement(3752963..3754099) 1 NC_000913.3 putative membrane protein; membrane fusion protein (MFP) component of efflux pump, signal anchor 3754099 yiaV 948106 yiaV Escherichia coli str. K-12 substr. MG1655 membrane fusion protein (MFP) component of efflux pump, signal anchor NP_418043.1 3752963 R 511145 CDS NP_418044.1 16131458 948105 complement(3754105..3754428) 1 NC_000913.3 DUF3302 family inner membrane protein 3754428 yiaW 948105 yiaW Escherichia coli str. K-12 substr. MG1655 DUF3302 family inner membrane protein NP_418044.1 3754105 R 511145 CDS NP_418045.4 90111619 948104 complement(3754973..3756511) 1 NC_000913.3 aldehyde dehydrogenase B (lactaldehyde dehydrogenase); aldehyde dehydrogenase B 3756511 aldB 948104 aldB Escherichia coli str. K-12 substr. MG1655 aldehyde dehydrogenase B NP_418045.4 3754973 R 511145 CDS YP_026233.1 49176377 948102 complement(3756676..3757827) 1 NC_000913.3 putative oxidoreductase; putative Fe-containing alcohol dehydrogenase, Pfam00465 family 3757827 yiaY 948102 yiaY Escherichia coli str. K-12 substr. MG1655 putative Fe-containing alcohol dehydrogenase, Pfam00465 family YP_026233.1 3756676 R 511145 CDS NP_418047.1 16131461 948103 complement(3758017..3759861) 1 NC_000913.3 selenocysteinyl-tRNA-specific translation factor 3759861 selB 948103 selB Escherichia coli str. K-12 substr. MG1655 selenocysteinyl-tRNA-specific translation factor NP_418047.1 3758017 R 511145 CDS NP_418048.1 16131462 948124 complement(3759858..3761249) 1 NC_000913.3 selenocysteine synthase: L-seryl-tRNA (Ser) selenium transferase; selenocysteine synthase 3761249 selA 948124 selA Escherichia coli str. K-12 substr. MG1655 selenocysteine synthase NP_418048.1 3759858 R 511145 CDS NP_418049.1 16131463 948113 complement(3761347..3761955) 1 NC_000913.3 putative S-transferase; glutathione S-transferase homolog 3761955 yibF 948113 yibF Escherichia coli str. K-12 substr. MG1655 glutathione S-transferase homolog NP_418049.1 3761347 R 511145 CDS NP_418050.1 16131464 948120 3762183..3766316 1 NC_000913.3 rhsA protein in rhs element; Rhs family protein, putative polymorphic toxin; putative polysaccharide synthesis/export protein; putative neighboring cell growth inhibitor 3766316 rhsA 948120 rhsA Escherichia coli str. K-12 substr. MG1655 Rhs family protein, putative polymorphic toxin; putative polysaccharide synthesis/export protein; putative neighboring cell growth inhibitor NP_418050.1 3762183 D 511145 CDS NP_418051.1 16131465 948108 3766337..3767179 1 NC_000913.3 HEAT-domain lethality reduction protein; putative immunity protein for putative polymorphic toxin RhsA 3767179 yibA 948108 yibA Escherichia coli str. K-12 substr. MG1655 HEAT-domain lethality reduction protein; putative immunity protein for putative polymorphic toxin RhsA NP_418051.1 3766337 D 511145 CDS b3595 948112 3767221..3768165 1 NC_000913.3 Rhs-family protein; <NULL_VALUE> 3768165 rhsJ 948112 rhsJ Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 3767221 D 511145 CDS NP_418053.1 16131467 948111 3768177..3768638 1 NC_000913.3 TPR-like repeat protein 3768638 yibG 948111 yibG Escherichia coli str. K-12 substr. MG1655 TPR-like repeat protein NP_418053.1 3768177 D 511145 CDS b4650 5625576 3768639..3768890 1 NC_000913.3 pseudogene, Rhs family protein; <NULL_VALUE> 3768890 yibS 5625576 yibS Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 3768639 D 511145 CDS b4651 5625577 join(3768892..3768975,3768975..3769256) 1 NC_000913.3 pseudogene, rhsA-linked; <NULL_VALUE> 3769256 yibW 5625577 yibW Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 3768892 D 511145 CDS b4615 5061524 join(3769345..3769671,3769673..3769783) 1 NC_000913.3 pseudogene; <NULL_VALUE> 3769783 yibV 5061524 yibV Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 3769345 D 511145 CDS b4652 5625578 join(3769948..3770034,3770033..3770146) 1 NC_000913.3 pseudogene, H repeat-associated protein; <NULL_VALUE> 3770146 yibU 5625578 yibU Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 3769948 D 511145 CDS NP_418054.1 16131468 948110 complement(3770243..3771379) 1 NC_000913.3 putative membrane protein; putative membrane fusion protein (MFP) component of efflux pump 3771379 yibH 948110 yibH Escherichia coli str. K-12 substr. MG1655 putative membrane fusion protein (MFP) component of efflux pump NP_418054.1 3770243 R 511145 CDS NP_418055.1 16131469 948109 complement(3771382..3771744) 1 NC_000913.3 DUF3302 family inner membrane protein 3771744 yibI 948109 yibI Escherichia coli str. K-12 substr. MG1655 DUF3302 family inner membrane protein NP_418055.1 3771382 R 511145 CDS NP_418056.1 16131470 948118 3772281..3774194 1 NC_000913.3 PTS system, mannitol-specific enzyme IIABC components; fused mannitol-specific PTS enzymes: IIA components/IIB components/IIC components 3774194 mtlA 948118 mtlA Escherichia coli str. K-12 substr. MG1655 fused mannitol-specific PTS enzymes: IIA components/IIB components/IIC components NP_418056.1 3772281 D 511145 CDS NP_418057.1 16131471 948117 3774424..3775572 1 NC_000913.3 mannitol-1-phosphate dehydrogenase; mannitol-1-phosphate dehydrogenase, NAD-dependent 3775572 mtlD 948117 mtlD Escherichia coli str. K-12 substr. MG1655 mannitol-1-phosphate dehydrogenase, NAD-dependent NP_418057.1 3774424 D 511145 CDS NP_418058.1 16131472 948116 3775572..3776159 1 NC_000913.3 repressor for mtl; mannitol operon repressor 3776159 mtlR 948116 mtlR Escherichia coli str. K-12 substr. MG1655 mannitol operon repressor NP_418058.1 3775572 D 511145 CDS YP_588470.1 94541127 1450299 complement(3776171..3776380) 1 NC_000913.3 uncharacterized protein 3776380 yibT 1450299 yibT Escherichia coli str. K-12 substr. MG1655 uncharacterized protein YP_588470.1 3776171 R 511145 CDS NP_418059.1 16131473 948115 3776665..3777027 1 NC_000913.3 ribosome-associated DUF2810 family protein 3777027 yibL 948115 yibL Escherichia coli str. K-12 substr. MG1655 ribosome-associated DUF2810 family protein NP_418059.1 3776665 D 511145 CDS NP_418060.1 16131474 948114 3777399..3779054 1 NC_000913.3 L-lactate permease 3779054 lldP 948114 lldP Escherichia coli str. K-12 substr. MG1655 L-lactate permease NP_418060.1 3777399 D 511145 CDS NP_418061.1 16131475 948122 3779054..3779830 1 NC_000913.3 transcriptional regulator; dual role activator/repressor for lldPRD operon 3779830 lldR 948122 lldR Escherichia coli str. K-12 substr. MG1655 dual role activator/repressor for lldPRD operon NP_418061.1 3779054 D 511145 CDS NP_418062.1 16131476 948121 3779827..3781017 1 NC_000913.3 L-lactate dehydrogenase; L-lactate dehydrogenase, FMN-linked 3781017 lldD 948121 lldD Escherichia coli str. K-12 substr. MG1655 L-lactate dehydrogenase, FMN-linked NP_418062.1 3779827 D 511145 CDS NP_418063.1 16131477 948119 3781215..3781688 1 NC_000913.3 tRNA Leu mC34,mU34 2'-O-methyltransferase, SAM-dependent 3781688 trmL 948119 trmL Escherichia coli str. K-12 substr. MG1655 tRNA Leu mC34,mU34 2'-O-methyltransferase, SAM-dependent NP_418063.1 3781215 D 511145 CDS NP_418064.1 16131478 948126 complement(3781741..3782562) 1 NC_000913.3 serine acetyltransferase 3782562 cysE 948126 cysE Escherichia coli str. K-12 substr. MG1655 serine acetyltransferase NP_418064.1 3781741 R 511145 CDS NP_418065.1 16131479 948125 complement(3782642..3783661) 1 NC_000913.3 glycerol-3-phosphate dehydrogenase (NAD+) 3783661 gpsA 948125 gpsA Escherichia coli str. K-12 substr. MG1655 glycerol-3-phosphate dehydrogenase (NAD+) NP_418065.1 3782642 R 511145 CDS NP_418066.1 16131480 948123 complement(3783661..3784128) 1 NC_000913.3 protein export; molecular chaperone; may bind to signel sequence; protein export chaperone 3784128 secB 948123 secB Escherichia coli str. K-12 substr. MG1655 protein export chaperone NP_418066.1 3783661 R 511145 CDS NP_418067.1 16131481 948132 complement(3784191..3784442) 1 NC_000913.3 glutaredoxin 3 3784442 grxC 948132 grxC Escherichia coli str. K-12 substr. MG1655 glutaredoxin 3 NP_418067.1 3784191 R 511145 CDS NP_418068.1 16131482 948131 complement(3784584..3785015) 1 NC_000913.3 putative rhodanese-related sulfurtransferase 3785015 yibN 948131 yibN Escherichia coli str. K-12 substr. MG1655 putative rhodanese-related sulfurtransferase NP_418068.1 3784584 R 511145 CDS NP_418069.1 16131483 948130 3785260..3786804 1 NC_000913.3 putative 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; phosphoglycero mutase III, cofactor-independent 3786804 gpmM 948130 gpmM Escherichia coli str. K-12 substr. MG1655 phosphoglycero mutase III, cofactor-independent NP_418069.1 3785260 D 511145 CDS NP_418070.6 162135913 948129 3786838..3788097 1 NC_000913.3 putative membrane protein; activator of AmiB,C murein hydrolases, septal ring factor 3788097 envC 948129 envC Escherichia coli str. K-12 substr. MG1655 activator of AmiB,C murein hydrolases, septal ring factor NP_418070.6 3786838 D 511145 CDS NP_418071.4 90111621 948128 3788101..3789060 1 NC_000913.3 putative polysaccharide deacetylase 3789060 yibQ 948128 yibQ Escherichia coli str. K-12 substr. MG1655 putative polysaccharide deacetylase NP_418071.4 3788101 D 511145 CDS NP_418072.1 16131486 948140 complement(3789047..3790081) 1 NC_000913.3 putative regulator; LPS(HepIII)-glucuronic acid glycosyltransferase 3790081 waaH 948140 waaH Escherichia coli str. K-12 substr. MG1655 LPS(HepIII)-glucuronic acid glycosyltransferase NP_418072.1 3789047 R 511145 CDS NP_418073.1 16131487 948139 complement(3790320..3791345) 1 NC_000913.3 threonine dehydrogenase; L-threonine 3-dehydrogenase, NAD(P)-binding 3791345 tdh 948139 tdh Escherichia coli str. K-12 substr. MG1655 L-threonine 3-dehydrogenase, NAD(P)-binding NP_418073.1 3790320 R 511145 CDS NP_418074.1 16131488 948138 complement(3791355..3792551) 1 NC_000913.3 2-amino-3-ketobutyrate CoA ligase (glycine acetyltransferase); glycine C-acetyltransferase 3792551 kbl 948138 kbl Escherichia coli str. K-12 substr. MG1655 glycine C-acetyltransferase NP_418074.1 3791355 R 511145 CDS NP_418075.2 90111622 948137 complement(3792826..3793683) 1 NC_000913.3 involved in lipopolysaccharide biosynthesis; YibB family protein, function unknown 3793683 yibB 948137 yibB Escherichia coli str. K-12 substr. MG1655 YibB family protein, function unknown NP_418075.2 3792826 R 511145 CDS NP_418076.1 16131490 948134 3793987..3794919 1 NC_000913.3 ADP-L-glycero-D-mannoheptose-6-epimerase; ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding 3794919 hldD 948134 hldD Escherichia coli str. K-12 substr. MG1655 ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding NP_418076.1 3793987 D 511145 CDS NP_418077.1 16131491 948135 3794929..3795975 1 NC_000913.3 ADP-heptose--lps heptosyltransferase II; lipopolysaccharide core biosynthesis; ADP-heptose:LPS heptosyltransferase II 3795975 waaF 948135 waaF Escherichia coli str. K-12 substr. MG1655 ADP-heptose:LPS heptosyltransferase II NP_418077.1 3794929 D 511145 CDS NP_418078.1 16131492 948136 3795979..3796938 1 NC_000913.3 heptosyl transferase I; lipopolysaccharide core biosynthesis; ADP-heptose:LPS heptosyl transferase I 3796938 waaC 948136 waaC Escherichia coli str. K-12 substr. MG1655 ADP-heptose:LPS heptosyl transferase I NP_418078.1 3795979 D 511145 CDS NP_418079.1 16131493 948148 3796948..3798207 1 NC_000913.3 O-antigen ligase; lipopolysaccharide core biosynthesis; O-antigen ligase 3798207 waaL 948148 waaL Escherichia coli str. K-12 substr. MG1655 O-antigen ligase NP_418079.1 3796948 D 511145 CDS NP_418080.1 16131494 948147 complement(3798239..3799312) 1 NC_000913.3 probably hexose transferase; lipopolysaccharide core biosynthesis; lipopolysaccharide core biosynthesis 3799312 waaU 948147 waaU Escherichia coli str. K-12 substr. MG1655 lipopolysaccharide core biosynthesis NP_418080.1 3798239 R 511145 CDS NP_418081.1 16131495 948146 complement(3799345..3800196) 1 NC_000913.3 lipopolysaccharide core biosynthesis; lipopolysaccharide core biosynthesis protein 3800196 waaZ 948146 waaZ Escherichia coli str. K-12 substr. MG1655 lipopolysaccharide core biosynthesis protein NP_418081.1 3799345 R 511145 CDS NP_418082.1 16131496 948145 complement(3800267..3800965) 1 NC_000913.3 lipopolysaccharide core biosynthesis; lipopolysaccharide core biosynthesis protein 3800965 waaY 948145 waaY Escherichia coli str. K-12 substr. MG1655 lipopolysaccharide core biosynthesis protein NP_418082.1 3800267 R 511145 CDS NP_418083.1 16131497 948142 complement(3800983..3801999) 1 NC_000913.3 UDP-D-glucose:(galactosyl)lipopolysaccharide glucosyltransferase 3801999 waaJ 948142 waaJ Escherichia coli str. K-12 substr. MG1655 UDP-D-glucose:(galactosyl)lipopolysaccharide glucosyltransferase NP_418083.1 3800983 R 511145 CDS NP_418084.1 16131498 948143 complement(3802039..3803058) 1 NC_000913.3 UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase; UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase 3803058 waaR 948143 waaR Escherichia coli str. K-12 substr. MG1655 UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase NP_418084.1 3802039 R 511145 CDS NP_418085.2 226524757 948144 complement(3803058..3804137) 1 NC_000913.3 UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase 3804137 waaB 948144 waaB Escherichia coli str. K-12 substr. MG1655 UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase NP_418085.2 3803058 R 511145 CDS NP_418086.1 16131500 948151 complement(3804181..3805116) 1 NC_000913.3 lipopolysaccharide core biosynthesis; lipopolysaccharide core biosynthesis protein 3805116 waaS 948151 waaS Escherichia coli str. K-12 substr. MG1655 lipopolysaccharide core biosynthesis protein NP_418086.1 3804181 R 511145 CDS NP_418087.1 16131501 948150 complement(3805153..3805950) 1 NC_000913.3 lipopolysaccharide core biosynthesis; phosphorylation of core heptose; attaches phosphate-containing substrate to LPS co; kinase that phosphorylates core heptose of lipopolysaccharide 3805950 waaP 948150 waaP Escherichia coli str. K-12 substr. MG1655 kinase that phosphorylates core heptose of lipopolysaccharide NP_418087.1 3805153 R 511145 CDS NP_418088.1 16131502 948149 complement(3805943..3807067) 1 NC_000913.3 glucosyltransferase I; lipopolysaccharide core biosynthesis; glucosyltransferase I 3807067 waaG 948149 waaG Escherichia coli str. K-12 substr. MG1655 glucosyltransferase I NP_418088.1 3805943 R 511145 CDS NP_418089.1 16131503 948155 complement(3807064..3808098) 1 NC_000913.3 lipopolysaccharide core biosynthesis; lipopolysaccharide core biosynthesis protein 3808098 waaQ 948155 waaQ Escherichia coli str. K-12 substr. MG1655 lipopolysaccharide core biosynthesis protein NP_418089.1 3807064 R 511145 CDS NP_418090.1 16131504 949048 3808540..3809817 1 NC_000913.3 3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase) 3809817 waaA 949048 waaA Escherichia coli str. K-12 substr. MG1655 3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase) NP_418090.1 3808540 D 511145 CDS NP_418091.1 16131505 947386 3809825..3810304 1 NC_000913.3 pantetheine-phosphate adenylyltransferase 3810304 coaD 947386 coaD Escherichia coli str. K-12 substr. MG1655 pantetheine-phosphate adenylyltransferase NP_418091.1 3809825 D 511145 CDS NP_418092.1 16131506 946765 complement(3810343..3811152) 1 NC_000913.3 formamidopyrimidine DNA glycosylase; formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase 3811152 mutM 946765 mutM Escherichia coli str. K-12 substr. MG1655 formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase NP_418092.1 3810343 R 511145 CDS NP_418093.1 16131507 946318 complement(3811250..3811417) 1 NC_000913.3 50S ribosomal subunit protein L33 3811417 rpmG 946318 rpmG Escherichia coli str. K-12 substr. MG1655 50S ribosomal subunit protein L33 NP_418093.1 3811250 R 511145 CDS NP_418094.1 16131508 946941 complement(3811438..3811674) 1 NC_000913.3 50S ribosomal subunit protein L28 3811674 rpmB 946941 rpmB Escherichia coli str. K-12 substr. MG1655 50S ribosomal subunit protein L28 NP_418094.1 3811438 R 511145 CDS NP_418095.4 162135914 948968 complement(3811891..3812559) 1 NC_000913.3 DNA repair protein; UPF0758 family protein 3812559 yicR 948968 yicR Escherichia coli str. K-12 substr. MG1655 UPF0758 family protein NP_418095.4 3811891 R 511145 CDS NP_418096.4 90111624 949047 3812731..3813951 1 NC_000913.3 flavoprotein affecting synthesis of DNA and pantothenate metabolism; fused 4'-phosphopantothenoylcysteine decarboxylase/phosphopantothenoylcysteine synthetase, FMN-binding 3813951 dfp 949047 dfp Escherichia coli str. K-12 substr. MG1655 fused 4'-phosphopantothenoylcysteine decarboxylase/phosphopantothenoylcysteine synthetase, FMN-binding NP_418096.4 3812731 D 511145 CDS NP_418097.1 16131511 948607 3813932..3814387 1 NC_000913.3 deoxyuridinetriphosphatase 3814387 dut 948607 dut Escherichia coli str. K-12 substr. MG1655 deoxyuridinetriphosphatase NP_418097.1 3813932 D 511145 CDS NP_418098.4 90111625 948158 3814494..3815090 1 NC_000913.3 putative transcriptional regulator; nucleoid occlusion factor, anti-FtsZ division inhibitor 3815090 slmA 948158 slmA Escherichia coli str. K-12 substr. MG1655 nucleoid occlusion factor, anti-FtsZ division inhibitor NP_418098.4 3814494 D 511145 CDS NP_418099.1 16131513 948157 complement(3815127..3815768) 1 NC_000913.3 orotate phosphoribosyltransferase 3815768 pyrE 948157 pyrE Escherichia coli str. K-12 substr. MG1655 orotate phosphoribosyltransferase NP_418099.1 3815127 R 511145 CDS b3643 948156 complement(join(3815834..3815881,3815881..3816549)) 1 NC_000913.3 ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH; <NULL_VALUE> 3816549 rph 948156 rph Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 3815834 R 511145 CDS NP_418101.1 16131515 948154 3816676..3817539 1 NC_000913.3 putative alpha helix protein; UPF0701 family protein 3817539 yicC 948154 yicC Escherichia coli str. K-12 substr. MG1655 UPF0701 family protein NP_418101.1 3816676 D 511145 CDS NP_418102.2 90111626 948153 3817760..3818584 1 NC_000913.3 DNA damage-inducible protein 3818584 dinD 948153 dinD Escherichia coli str. K-12 substr. MG1655 DNA damage-inducible protein NP_418102.2 3817760 D 511145 CDS NP_418103.4 90111627 948165 3818874..3819491 1 NC_000913.3 UPF0126 family inner membrane protein 3819491 yicG 948165 yicG Escherichia coli str. K-12 substr. MG1655 UPF0126 family inner membrane protein NP_418103.4 3818874 D 511145 CDS NP_418104.2 90111628 948164 complement(3819488..3821170) 1 NC_000913.3 putative enzyme; DNA ligase, NAD(+)-dependent 3821170 ligB 948164 ligB Escherichia coli str. K-12 substr. MG1655 DNA ligase, NAD(+)-dependent NP_418104.2 3819488 R 511145 CDS NP_418105.1 16131519 948163 3821428..3822051 1 NC_000913.3 guanylate kinase 3822051 gmk 948163 gmk Escherichia coli str. K-12 substr. MG1655 guanylate kinase NP_418105.1 3821428 D 511145 CDS NP_418106.1 16131520 948160 3822106..3822381 1 NC_000913.3 RNA polymerase, omega subunit 3822381 rpoZ 948160 rpoZ Escherichia coli str. K-12 substr. MG1655 RNA polymerase, omega subunit NP_418106.1 3822106 D 511145 CDS NP_418107.1 16131521 948159 3822400..3824508 1 NC_000913.3 (p)ppGpp synthetase II; also guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase; bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase 3824508 spoT 948159 spoT Escherichia coli str. K-12 substr. MG1655 bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase NP_418107.1 3822400 D 511145 CDS NP_418108.1 16131522 948161 3824515..3825204 1 NC_000913.3 tRNA mG18-2'-O-methyltransferase, SAM-dependent 3825204 trmH 948161 trmH Escherichia coli str. K-12 substr. MG1655 tRNA mG18-2'-O-methyltransferase, SAM-dependent NP_418108.1 3824515 D 511145 CDS NP_418109.1 16131523 948162 3825210..3827291 1 NC_000913.3 DNA helicase, resolution of Holliday junctions, branch migration; ATP-dependent DNA helicase 3827291 recG 948162 recG Escherichia coli str. K-12 substr. MG1655 ATP-dependent DNA helicase NP_418109.1 3825210 D 511145 CDS NP_418110.1 16131524 948166 complement(3827460..3828665) 1 NC_000913.3 glutamate transport; glutamate transporter 3828665 gltS 948166 gltS Escherichia coli str. K-12 substr. MG1655 glutamate transporter NP_418110.1 3827460 R 511145 CDS NP_418111.1 16131525 948172 3828945..3830336 1 NC_000913.3 putative transport protein; xanthine permease 3830336 xanP 948172 xanP Escherichia coli str. K-12 substr. MG1655 xanthine permease NP_418111.1 3828945 D 511145 CDS NP_418112.1 16131526 948171 3830457..3832166 1 NC_000913.3 putative inner membrane-anchored periplasmic AsmA family protein 3832166 yicH 948171 yicH Escherichia coli str. K-12 substr. MG1655 putative inner membrane-anchored periplasmic AsmA family protein NP_418112.1 3830457 D 511145 CDS NP_418113.1 16131527 948169 complement(3832219..3834537) 1 NC_000913.3 putative alpha-glucosidase 3834537 yicI 948169 yicI Escherichia coli str. K-12 substr. MG1655 putative alpha-glucosidase NP_418113.1 3832219 R 511145 CDS NP_418114.4 90111629 948168 complement(3834547..3835929) 1 NC_000913.3 putative permease; putative transporter 3835929 yicJ 948168 yicJ Escherichia coli str. K-12 substr. MG1655 putative transporter NP_418114.4 3834547 R 511145 CDS b4653 5625579 3836425..3836556 1 NC_000913.3 pseudogene; <NULL_VALUE> 3836556 yicT 5625579 yicT Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 3836425 D 511145 CDS NP_418115.1 16131529 948177 3836953..3838137 1 NC_000913.3 two-module transport protein; putative arabinose efflux transporter 3838137 setC 948177 setC Escherichia coli str. K-12 substr. MG1655 putative arabinose efflux transporter NP_418115.1 3836953 D 511145 CDS NP_418116.1 16131530 948176 3838248..3839171 1 NC_000913.3 putative permease transporter; EamA family inner membrane putative transporter 3839171 yicL 948176 yicL Escherichia coli str. K-12 substr. MG1655 EamA family inner membrane putative transporter NP_418116.1 3838248 D 511145 CDS NP_418117.1 16131531 948175 complement(3839175..3839993) 1 NC_000913.3 lipoprotein-28; cytoplasmic membrane lipoprotein-28 3839993 nlpA 948175 nlpA Escherichia coli str. K-12 substr. MG1655 cytoplasmic membrane lipoprotein-28 NP_418117.1 3839175 R 511145 CDS YP_588471.1 94541128 1450300 3840215..3840508 1 NC_000913.3 putative periplasmic protein 3840508 yicS 1450300 yicS Escherichia coli str. K-12 substr. MG1655 putative periplasmic protein YP_588471.1 3840215 D 511145 CDS NP_418118.2 145698327 948213 complement(3840549..3841739) 1 NC_000913.3 putative transport protein; putative transporter 3841739 nepI 948213 nepI Escherichia coli str. K-12 substr. MG1655 putative transporter NP_418118.2 3840549 R 511145 CDS NP_418119.2 90111630 948173 complement(3841950..3842402) 1 NC_000913.3 DUF1198 family protein 3842402 yicN 948173 yicN Escherichia coli str. K-12 substr. MG1655 DUF1198 family protein NP_418119.2 3841950 R 511145 CDS NP_418120.2 90111631 948174 complement(3842455..3843789) 1 NC_000913.3 putative adenine permease 3843789 yicO 948174 yicO Escherichia coli str. K-12 substr. MG1655 putative adenine permease NP_418120.2 3842455 R 511145 CDS NP_418121.1 16131535 948210 3843964..3845730 1 NC_000913.3 cryptic adenine deaminase 3845730 ade 948210 ade Escherichia coli str. K-12 substr. MG1655 cryptic adenine deaminase NP_418121.1 3843964 D 511145 CDS NP_418122.1 16131536 948201 complement(3845776..3847167) 1 NC_000913.3 hexose phosphate transport protein; hexose phosphate transporter 3847167 uhpT 948201 uhpT Escherichia coli str. K-12 substr. MG1655 hexose phosphate transporter NP_418122.1 3845776 R 511145 CDS NP_418123.2 90111632 948184 complement(3847305..3848624) 1 NC_000913.3 regulator of uhpT; membrane protein regulates uhpT expression 3848624 uhpC 948184 uhpC Escherichia coli str. K-12 substr. MG1655 membrane protein regulates uhpT expression NP_418123.2 3847305 R 511145 CDS NP_418124.4 90111633 948195 complement(3848634..3850136) 1 NC_000913.3 sensor histidine protein kinase phosphorylates UhpA; sensory histidine kinase in two-component regulatory sytem with UhpA 3850136 uhpB 948195 uhpB Escherichia coli str. K-12 substr. MG1655 sensory histidine kinase in two-component regulatory sytem with UhpA NP_418124.4 3848634 R 511145 CDS NP_418125.1 16131539 948178 complement(3850136..3850726) 1 NC_000913.3 response regulator, positive activator of uhpT transcription (sensor, uhpB); response regulator in two-component regulatory system wtih UhpB 3850726 uhpA 948178 uhpA Escherichia coli str. K-12 substr. MG1655 response regulator in two-component regulatory system wtih UhpB NP_418125.1 3850136 R 511145 CDS NP_418126.1 16131540 948183 complement(3850802..3851092) 1 NC_000913.3 acetolactate synthase I, valine sensitive, small subunit; acetolactate synthase 1 small subunit 3851092 ilvN 948183 ilvN Escherichia coli str. K-12 substr. MG1655 acetolactate synthase 1 small subunit NP_418126.1 3850802 R 511145 CDS NP_418127.1 16131541 948182 complement(3851096..3852784) 1 NC_000913.3 acetolactate synthase I,valine-sensitive, large subunit; acetolactate synthase 2 large subunit 3852784 ilvB 948182 ilvB Escherichia coli str. K-12 substr. MG1655 acetolactate synthase 2 large subunit NP_418127.1 3851096 R 511145 CDS NP_418128.1 16131542 948181 complement(3852890..3852988) 1 NC_000913.3 ilvB operon leader peptide 3852988 ivbL 948181 ivbL Escherichia coli str. K-12 substr. MG1655 ilvB operon leader peptide NP_418128.1 3852890 R 511145 CDS YP_001165331.1 145698329 5061527 3853553..3853642 1 NC_000913.3 toxic membrane persister formation peptide, LexA-regulated 3853642 tisB 5061527 tisB Escherichia coli str. K-12 substr. MG1655 toxic membrane persister formation peptide, LexA-regulated YP_001165331.1 3853553 D 511145 CDS NP_418129.2 90111634 948180 3853922..3855106 1 NC_000913.3 2-module integral membrane pump; multidrug resistance; multidrug efflux system protein 3855106 emrD 948180 emrD Escherichia coli str. K-12 substr. MG1655 multidrug efflux system protein NP_418129.2 3853922 D 511145 CDS NP_418130.1 16131544 948179 complement(3855114..3855611) 1 NC_000913.3 putative transcriptional regulator; putative Cys-type oxidative YidJ-maturating enzyme 3855611 yidF 948179 yidF Escherichia coli str. K-12 substr. MG1655 putative Cys-type oxidative YidJ-maturating enzyme NP_418130.1 3855114 R 511145 CDS NP_418131.1 16131545 948191 complement(3855608..3855970) 1 NC_000913.3 inner membrane protein 3855970 yidG 948191 yidG Escherichia coli str. K-12 substr. MG1655 inner membrane protein NP_418131.1 3855608 R 511145 CDS NP_418132.1 16131546 948190 complement(3855960..3856307) 1 NC_000913.3 DUF202 family inner membrane protein 3856307 yidH 948190 yidH Escherichia coli str. K-12 substr. MG1655 DUF202 family inner membrane protein NP_418132.1 3855960 R 511145 CDS NP_418133.1 16131547 948189 3856415..3856864 1 NC_000913.3 inner membrane protein 3856864 yidI 948189 yidI Escherichia coli str. K-12 substr. MG1655 inner membrane protein NP_418133.1 3856415 D 511145 CDS NP_418134.1 16131548 948188 complement(3856911..3858404) 1 NC_000913.3 putative sulfatase; sulfatase/phosphatase superfamily protein 3858404 yidJ 948188 yidJ Escherichia coli str. K-12 substr. MG1655 sulfatase/phosphatase superfamily protein NP_418134.1 3856911 R 511145 CDS NP_418135.1 16131549 948185 complement(3858401..3860116) 1 NC_000913.3 putative cotransporter; putative transporter 3860116 yidK 948185 yidK Escherichia coli str. K-12 substr. MG1655 putative transporter NP_418135.1 3858401 R 511145 CDS NP_418136.2 226524758 948186 3860283..3861176 1 NC_000913.3 putative ARAC-type regulatory protein; AraC family putative transcriptional regulator 3861176 yidL 948186 yidL Escherichia coli str. K-12 substr. MG1655 AraC family putative transcriptional regulator NP_418136.2 3860283 D 511145 CDS b4556 1450301 complement(3861173..3861987) 1 NC_000913.3 pseudogene; probable 6-phospho-beta-glucosidase; <NULL_VALUE> 3861987 glvG 1450301 glvG Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 3861173 R 511145 CDS b3683 2847721 complement(3861987..3863603) 1 NC_000913.3 pseudogene, arbutin specific enzyme IIC component of PTS;enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system, arbutin-like IIB component; PTS system, arbutin-like IIC component; <NULL_VALUE> 3863603 glvC 2847721 glvC Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 3861987 R 511145 CDS NP_418139.1 16131552 948194 3863899..3864615 1 NC_000913.3 putative transcriptional regulator; UTRA domain-containing GntR family putative transcriptional regulator 3864615 yidP 948194 yidP Escherichia coli str. K-12 substr. MG1655 UTRA domain-containing GntR family putative transcriptional regulator NP_418139.1 3863899 D 511145 CDS NP_418140.4 90111636 948193 complement(3864612..3866273) 1 NC_000913.3 putative transport protein; putative transporter 3866273 yidE 948193 yidE Escherichia coli str. K-12 substr. MG1655 putative transporter NP_418140.4 3864612 R 511145 CDS NP_418141.2 90111637 948192 complement(3866469..3866897) 1 NC_000913.3 heat shock protein; heat shock chaperone 3866897 ibpB 948192 ibpB Escherichia coli str. K-12 substr. MG1655 heat shock chaperone NP_418141.2 3866469 R 511145 CDS NP_418142.1 16131555 948200 complement(3867009..3867422) 1 NC_000913.3 heat shock protein; heat shock chaperone 3867422 ibpA 948200 ibpA Escherichia coli str. K-12 substr. MG1655 heat shock chaperone NP_418142.1 3867009 R 511145 CDS NP_418143.2 90111638 948199 3867728..3868060 1 NC_000913.3 DUF1375 family outer membrane protein 3868060 yidQ 948199 yidQ Escherichia coli str. K-12 substr. MG1655 DUF1375 family outer membrane protein NP_418143.2 3867728 D 511145 CDS NP_418144.3 308209622 948198 complement(3868062..3869309) 1 NC_000913.3 DUF3748 family protein 3869309 yidR 948198 yidR Escherichia coli str. K-12 substr. MG1655 DUF3748 family protein NP_418144.3 3868062 R 511145 CDS NP_418145.2 90111640 948197 3869377..3870441 1 NC_000913.3 colicin M resistance protein; FAD-binding protein, putative oxidoreductase 3870441 cbrA 948197 cbrA Escherichia coli str. K-12 substr. MG1655 colicin M resistance protein; FAD-binding protein, putative oxidoreductase NP_418145.2 3869377 D 511145 CDS NP_418146.4 90111641 948196 complement(3870438..3871730) 1 NC_000913.3 D-galactonate transport; D-galactonate transporter 3871730 dgoT 948196 dgoT Escherichia coli str. K-12 substr. MG1655 D-galactonate transporter NP_418146.4 3870438 R 511145 CDS YP_026237.1 49176390 2847765 complement(3871850..3872998) 1 NC_000913.3 galactonate dehydratase 3872998 dgoD 2847765 dgoD Escherichia coli str. K-12 substr. MG1655 galactonate dehydratase YP_026237.1 3871850 R 511145 CDS YP_026238.1 49176391 2847766 complement(3872995..3873612) 1 NC_000913.3 2-oxo-3-deoxygalactonate 6-phosphate aldolase 3873612 dgoA 2847766 dgoA Escherichia coli str. K-12 substr. MG1655 2-oxo-3-deoxygalactonate 6-phosphate aldolase YP_026238.1 3872995 R 511145 CDS NP_418148.1 16131561 948207 complement(3873596..3874474) 1 NC_000913.3 2-oxo-3-deoxygalactonate kinase 3874474 dgoK 948207 dgoK Escherichia coli str. K-12 substr. MG1655 2-oxo-3-deoxygalactonate kinase NP_418148.1 3873596 R 511145 CDS YP_026239.1 49176392 2847767 complement(3874471..3875160) 1 NC_000913.3 transcriptional repressor for galactonate utilization (GntR family); putative DNA-binding transcriptional regulator 3875160 dgoR 2847767 dgoR Escherichia coli str. K-12 substr. MG1655 putative DNA-binding transcriptional regulator YP_026239.1 3874471 R 511145 CDS YP_026240.1 49176393 948202 3875438..3876094 1 NC_000913.3 putative replicase EC 2.7.-; putative lipoprotein 3876094 yidX 948202 yidX Escherichia coli str. K-12 substr. MG1655 putative lipoprotein YP_026240.1 3875438 D 511145 CDS NP_418152.1 16131565 948204 complement(3876140..3876952) 1 NC_000913.3 sugar phosphate phosphatase; substrates include erythrose 4-P and mannose 1-P phosphatase 3876952 yidA 948204 yidA Escherichia coli str. K-12 substr. MG1655 sugar phosphate phosphatase; substrates include erythrose 4-P and mannose 1-P phosphatase NP_418152.1 3876140 R 511145 CDS NP_418153.4 90111642 948212 complement(3877067..3877465) 1 NC_000913.3 DUF937 family protein 3877465 yidB 948212 yidB Escherichia coli str. K-12 substr. MG1655 DUF937 family protein NP_418153.4 3877067 R 511145 CDS YP_026241.1 49176395 948211 complement(3877705..3880119) 1 NC_000913.3 DNA gyrase subunit B, type II topoisomerase, ATPase activity; DNA gyrase, subunit B 3880119 gyrB 948211 gyrB Escherichia coli str. K-12 substr. MG1655 DNA gyrase, subunit B YP_026241.1 3877705 R 511145 CDS NP_418155.1 16131568 948209 complement(3880148..3881221) 1 NC_000913.3 ssDNA and dsDNA binding, ATP binding; gap repair protein 3881221 recF 948209 recF Escherichia coli str. K-12 substr. MG1655 gap repair protein NP_418155.1 3880148 R 511145 CDS NP_418156.1 16131569 948218 complement(3881221..3882321) 1 NC_000913.3 DNA polymerase III, beta-subunit; DNA polymerase III, beta subunit 3882321 dnaN 948218 dnaN Escherichia coli str. K-12 substr. MG1655 DNA polymerase III, beta subunit NP_418156.1 3881221 R 511145 CDS NP_418157.1 16131570 948217 complement(3882326..3883729) 1 NC_000913.3 DNA biosynthesis; initiation of chromosome replication; can be transcription regulator; chromosomal replication initiator protein DnaA, DNA-binding transcriptional dual regulator 3883729 dnaA 948217 dnaA Escherichia coli str. K-12 substr. MG1655 chromosomal replication initiator protein DnaA, DNA-binding transcriptional dual regulator NP_418157.1 3882326 R 511145 CDS NP_418158.1 16131571 948216 3884336..3884476 1 NC_000913.3 50S ribosomal subunit protein L34 3884476 rpmH 948216 rpmH Escherichia coli str. K-12 substr. MG1655 50S ribosomal subunit protein L34 NP_418158.1 3884336 D 511145 CDS NP_418159.1 16131572 948215 3884493..3884852 1 NC_000913.3 RNase P is an essential enzyme responsible for the processing of the 5' ends of precursors to tRNA, 4.5S RNA, and other naturally occurring stable RNA molecules; RNase P also affects gene expression of polycistronic operon mRNAs; protein C5 component of RNase P 3884852 rnpA 948215 rnpA Escherichia coli str. K-12 substr. MG1655 protein C5 component of RNase P NP_418159.1 3884493 D 511145 CDS YP_588472.1 94541129 1450303 3884816..3885073 1 NC_000913.3 membrane protein insertion efficiency factor, inner membrane protein, UPF0161 family 3885073 yidD 1450303 yidD Escherichia coli str. K-12 substr. MG1655 membrane protein insertion efficiency factor, inner membrane protein, UPF0161 family YP_588472.1 3884816 D 511145 CDS NP_418161.1 16131573 948214 3885076..3886722 1 NC_000913.3 60 KD inner-membrane protein; membrane protein insertase 3886722 yidC 948214 yidC Escherichia coli str. K-12 substr. MG1655 membrane protein insertase NP_418161.1 3885076 D 511145 CDS NP_418162.1 16131574 948222 3886828..3888192 1 NC_000913.3 tRNA U34 5-methylaminomethyl-2-thiouridine modification GTPase 3888192 mnmE 948222 mnmE Escherichia coli str. K-12 substr. MG1655 tRNA U34 5-methylaminomethyl-2-thiouridine modification GTPase NP_418162.1 3886828 D 511145 CDS NP_418163.1 16131575 948223 3888435..3888509 1 NC_000913.3 tryptophanase leader peptide 3888509 tnaC 948223 tnaC Escherichia coli str. K-12 substr. MG1655 tryptophanase leader peptide NP_418163.1 3888435 D 511145 CDS NP_418164.4 90111643 948221 3888730..3890145 1 NC_000913.3 tryptophanase; tryptophanase/L-cysteine desulfhydrase, PLP-dependent 3890145 tnaA 948221 tnaA Escherichia coli str. K-12 substr. MG1655 tryptophanase/L-cysteine desulfhydrase, PLP-dependent NP_418164.4 3888730 D 511145 CDS NP_418165.1 16131577 948220 3890236..3891483 1 NC_000913.3 low affinity tryptophan permease; tryptophan transporter of low affinity 3891483 tnaB 948220 tnaB Escherichia coli str. K-12 substr. MG1655 tryptophan transporter of low affinity NP_418165.1 3890236 D 511145 CDS NP_418166.1 16131578 948219 3891615..3892790 1 NC_000913.3 putative transport protein; multidrug efflux system protein 3892790 mdtL 948219 mdtL Escherichia coli str. K-12 substr. MG1655 multidrug efflux system protein NP_418166.1 3891615 D 511145 CDS NP_418167.1 16131579 948227 3892765..3893724 1 NC_000913.3 putative transcriptional regulator LYSR-type; putative DNA-binding transcriptional regulator 3893724 yidZ 948227 yidZ Escherichia coli str. K-12 substr. MG1655 putative DNA-binding transcriptional regulator NP_418167.1 3892765 D 511145 CDS NP_418168.2 226524759 948226 3893881..3894630 1 NC_000913.3 phosphopantetheinyl transferase superfamily protein 3894630 yieE 948226 yieE Escherichia coli str. K-12 substr. MG1655 phosphopantetheinyl transferase superfamily protein NP_418168.2 3893881 D 511145 CDS NP_418169.1 16131581 948225 3894652..3895218 1 NC_000913.3 chromate reductase, Class I, flavoprotein 3895218 chrR 948225 chrR Escherichia coli str. K-12 substr. MG1655 chromate reductase, Class I, flavoprotein NP_418169.1 3894652 D 511145 CDS NP_418170.1 16131582 948224 complement(3895272..3896609) 1 NC_000913.3 putative membrane / transport protein; adenine permease, high affinity; adenine:H+ symporter 3896609 purP 948224 purP Escherichia coli str. K-12 substr. MG1655 adenine permease, high affinity; adenine:H+ symporter NP_418170.1 3895272 R 511145 CDS NP_418171.1 16131583 948232 3896774..3897439 1 NC_000913.3 putative phosphatase; phosphoenolpyruvate and 6-phosphogluconate phosphatase 3897439 yieH 948232 yieH Escherichia coli str. K-12 substr. MG1655 phosphoenolpyruvate and 6-phosphogluconate phosphatase NP_418171.1 3896774 D 511145 CDS NP_418172.1 16131584 948231 3897506..3897973 1 NC_000913.3 PRK09823 family inner membrane protein, creBC regulon 3897973 cbrB 948231 cbrB Escherichia coli str. K-12 substr. MG1655 PRK09823 family inner membrane protein, creBC regulon NP_418172.1 3897506 D 511145 CDS NP_418173.1 16131585 948230 3898022..3898609 1 NC_000913.3 UPF0167 family protein 3898609 cbrC 948230 cbrC Escherichia coli str. K-12 substr. MG1655 UPF0167 family protein NP_418173.1 3898022 D 511145 CDS YP_026242.1 49176397 948229 complement(3898671..3899393) 1 NC_000913.3 pyrimidine-specific nucleoside hydrolase; putative 6-phosphogluconolactonase 3899393 yieK 948229 yieK Escherichia coli str. K-12 substr. MG1655 putative 6-phosphogluconolactonase YP_026242.1 3898671 R 511145 CDS NP_418175.3 145698330 948272 complement(3899408..3900577) 1 NC_000913.3 putative xylanase 3900577 yieL 948272 yieL Escherichia coli str. K-12 substr. MG1655 putative xylanase NP_418175.3 3899408 R 511145 CDS NP_418176.1 16131588 948228 complement(3900604..3902220) 1 NC_000913.3 putative receptor protein; carbohydrate-specific outer membrane porin, cryptic 3902220 bglH 948228 bglH Escherichia coli str. K-12 substr. MG1655 carbohydrate-specific outer membrane porin, cryptic NP_418176.1 3900604 R 511145 CDS NP_418177.1 16131589 948234 complement(3902289..3903701) 1 NC_000913.3 phospho-beta-glucosidase B; cryptic; cryptic phospho-beta-glucosidase B 3903701 bglB 948234 bglB Escherichia coli str. K-12 substr. MG1655 cryptic phospho-beta-glucosidase B NP_418177.1 3902289 R 511145 CDS NP_418178.1 16131590 948236 complement(3903720..3905597) 1 NC_000913.3 PTS system beta-glucosides, enzyme II, cryptic; fused beta-glucoside-specific PTS enzymes: IIA component/IIB component/IIC component 3905597 bglF 948236 bglF Escherichia coli str. K-12 substr. MG1655 fused beta-glucoside-specific PTS enzymes: IIA component/IIB component/IIC component NP_418178.1 3903720 R 511145 CDS NP_418179.1 16131591 948235 complement(3905731..3906567) 1 NC_000913.3 positive regulation of bgl operon; transcriptional antiterminator of the bgl operon 3906567 bglG 948235 bglG Escherichia coli str. K-12 substr. MG1655 transcriptional antiterminator of the bgl operon NP_418179.1 3905731 R 511145 CDS NP_418180.1 16131592 948233 complement(3906853..3907578) 1 NC_000913.3 negative regulator for pho regulon and putative enzyme in phosphate metabolism; negative regulator of PhoR/PhoB two-component regulator 3907578 phoU 948233 phoU Escherichia coli str. K-12 substr. MG1655 negative regulator of PhoR/PhoB two-component regulator NP_418180.1 3906853 R 511145 CDS NP_418181.1 16131593 948240 complement(3907593..3908366) 1 NC_000913.3 ATP-binding component of high-affinity phosphate-specific transport system; ATP-binding component of ABC superfamily; phosphate transporter subunit 3908366 pstB 948240 pstB Escherichia coli str. K-12 substr. MG1655 phosphate transporter subunit NP_418181.1 3907593 R 511145 CDS NP_418182.1 16131594 948239 complement(3908549..3909439) 1 NC_000913.3 high-affinity phosphate-specific transport system; membrane component of ABC superfamily; phosphate transporter subunit 3909439 pstA 948239 pstA Escherichia coli str. K-12 substr. MG1655 phosphate transporter subunit NP_418182.1 3908549 R 511145 CDS NP_418183.1 16131595 948238 complement(3909439..3910398) 1 NC_000913.3 high-affinity phosphate-specific transport system, cytoplasmic membrane component; membrane component of ABC superfamily; phosphate transporter subunit 3910398 pstC 948238 pstC Escherichia coli str. K-12 substr. MG1655 phosphate transporter subunit NP_418183.1 3909439 R 511145 CDS NP_418184.1 16131596 948237 complement(3910485..3911525) 1 NC_000913.3 high-affinity phosphate-specific transport system; periplasmic phosphate-binding protein; periplasmic-binding component of ABC superfamily; periplasmic phosphate binding protein, high-affinity 3911525 pstS 948237 pstS Escherichia coli str. K-12 substr. MG1655 periplasmic phosphate binding protein, high-affinity NP_418184.1 3910485 R 511145 CDS NP_418185.1 16131597 948241 complement(3911839..3913668) 1 NC_000913.3 L-glutamine:D-fructose-6-phosphate aminotransferase 3913668 glmS 948241 glmS Escherichia coli str. K-12 substr. MG1655 L-glutamine:D-fructose-6-phosphate aminotransferase NP_418185.1 3911839 R 511145 CDS NP_418186.1 16131598 948246 complement(3913830..3915200) 1 NC_000913.3 N-acetyl glucosamine-1-phosphate uridyltransferase; fused N-acetyl glucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyl transferase 3915200 glmU 948246 glmU Escherichia coli str. K-12 substr. MG1655 fused N-acetyl glucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyl transferase NP_418186.1 3913830 R 511145 CDS NP_418187.1 16131599 948245 complement(3915553..3915972) 1 NC_000913.3 membrane-bound ATP synthase, F1 sector, epsilon-subunit; F1 sector of membrane-bound ATP synthase, epsilon subunit 3915972 atpC 948245 atpC Escherichia coli str. K-12 substr. MG1655 F1 sector of membrane-bound ATP synthase, epsilon subunit NP_418187.1 3915553 R 511145 CDS NP_418188.1 16131600 948244 complement(3915993..3917375) 1 NC_000913.3 membrane-bound ATP synthase, F1 sector, beta-subunit; F1 sector of membrane-bound ATP synthase, beta subunit 3917375 atpD 948244 atpD Escherichia coli str. K-12 substr. MG1655 F1 sector of membrane-bound ATP synthase, beta subunit NP_418188.1 3915993 R 511145 CDS NP_418189.1 16131601 948243 complement(3917402..3918265) 1 NC_000913.3 membrane-bound ATP synthase, F1 sector, gamma-subunit; F1 sector of membrane-bound ATP synthase, gamma subunit 3918265 atpG 948243 atpG Escherichia coli str. K-12 substr. MG1655 F1 sector of membrane-bound ATP synthase, gamma subunit NP_418189.1 3917402 R 511145 CDS NP_418190.1 16131602 948242 complement(3918316..3919857) 1 NC_000913.3 membrane-bound ATP synthase, F1 sector, alpha-subunit; F1 sector of membrane-bound ATP synthase, alpha subunit 3919857 atpA 948242 atpA Escherichia coli str. K-12 substr. MG1655 F1 sector of membrane-bound ATP synthase, alpha subunit NP_418190.1 3918316 R 511145 CDS NP_418191.1 16131603 948254 complement(3919870..3920403) 1 NC_000913.3 membrane-bound ATP synthase, F1 sector, delta-subunit; F1 sector of membrane-bound ATP synthase, delta subunit 3920403 atpH 948254 atpH Escherichia coli str. K-12 substr. MG1655 F1 sector of membrane-bound ATP synthase, delta subunit NP_418191.1 3919870 R 511145 CDS NP_418192.1 16131604 948247 complement(3920418..3920888) 1 NC_000913.3 membrane-bound ATP synthase, F0 sector, subunit b; F0 sector of membrane-bound ATP synthase, subunit b 3920888 atpF 948247 atpF Escherichia coli str. K-12 substr. MG1655 F0 sector of membrane-bound ATP synthase, subunit b NP_418192.1 3920418 R 511145 CDS NP_418193.1 16131605 948253 complement(3920950..3921189) 1 NC_000913.3 membrane-bound ATP synthase, F0 sector, subunit c; F0 sector of membrane-bound ATP synthase, subunit c 3921189 atpE 948253 atpE Escherichia coli str. K-12 substr. MG1655 F0 sector of membrane-bound ATP synthase, subunit c NP_418193.1 3920950 R 511145 CDS NP_418194.1 16131606 948252 complement(3921236..3922051) 1 NC_000913.3 membrane-bound ATP synthase, F0 sector, subunit a; F0 sector of membrane-bound ATP synthase, subunit a 3922051 atpB 948252 atpB Escherichia coli str. K-12 substr. MG1655 F0 sector of membrane-bound ATP synthase, subunit a NP_418194.1 3921236 R 511145 CDS NP_418195.2 90111645 948251 complement(3922060..3922440) 1 NC_000913.3 membrane-bound ATP synthase, dispensable protein, affects expression of atpB; ATP synthase, membrane-bound accessory factor 3922440 atpI 948251 atpI Escherichia coli str. K-12 substr. MG1655 ATP synthase, membrane-bound accessory factor NP_418195.2 3922060 R 511145 CDS NP_418196.1 16131608 948250 complement(3923057..3923680) 1 NC_000913.3 glucose-inhibited division; chromosome replication?; 16S rRNA m(7)G527 methyltransferase, SAM-dependent; glucose-inhibited cell-division protein 3923680 rsmG 948250 rsmG Escherichia coli str. K-12 substr. MG1655 16S rRNA m(7)G527 methyltransferase, SAM-dependent; glucose-inhibited cell-division protein NP_418196.1 3923057 R 511145 CDS NP_418197.1 16131609 948248 complement(3923744..3925633) 1 NC_000913.3 glucose-inhibited division; chromosome replication?; 5-methylaminomethyl-2-thiouridine modification at tRNA U34 3925633 mnmG 948248 mnmG Escherichia coli str. K-12 substr. MG1655 5-methylaminomethyl-2-thiouridine modification at tRNA U34 NP_418197.1 3923744 R 511145 CDS NP_418198.1 16131610 948249 complement(3926012..3926455) 1 NC_000913.3 initiation of chromosome replication; FMN-binding protein MioC 3926455 mioC 948249 mioC Escherichia coli str. K-12 substr. MG1655 FMN-binding protein MioC NP_418198.1 3926012 R 511145 CDS NP_418199.1 16131611 948259 complement(3926545..3927003) 1 NC_000913.3 regulator for asnA, asnC and gidA; transcriptional activator of asnA; autorepressor 3927003 asnC 948259 asnC Escherichia coli str. K-12 substr. MG1655 transcriptional activator of asnA; autorepressor NP_418199.1 3926545 R 511145 CDS NP_418200.1 16131612 948258 3927155..3928147 1 NC_000913.3 asparagine synthetase A 3928147 asnA 948258 asnA Escherichia coli str. K-12 substr. MG1655 asparagine synthetase A NP_418200.1 3927155 D 511145 CDS YP_026243.1 49176398 948257 complement(3928152..3929603) 1 NC_000913.3 stimulator of RavA ATPase activity; von Willebrand factor domain protein 3929603 viaA 948257 viaA Escherichia coli str. K-12 substr. MG1655 stimulator of RavA ATPase activity; von Willebrand factor domain protein YP_026243.1 3928152 R 511145 CDS NP_418202.4 90111646 948256 complement(3929597..3931093) 1 NC_000913.3 putative 2-component regulator; hexameric AAA+ MoxR family ATPase, putative molecular chaperone 3931093 ravA 948256 ravA Escherichia coli str. K-12 substr. MG1655 hexameric AAA+ MoxR family ATPase, putative molecular chaperone NP_418202.4 3929597 R 511145 CDS YP_026244.1 49176400 948255 3931316..3933184 1 NC_000913.3 low affinity potassium transport system; potassium transporter 3933184 kup 948255 kup Escherichia coli str. K-12 substr. MG1655 potassium transporter YP_026244.1 3931316 D 511145 CDS NP_418204.2 90111647 948267 3933351..3933770 1 NC_000913.3 D-ribose high-affinity transport system; membrane-associated protein; putative cytoplasmic sugar-binding protein 3933770 rbsD 948267 rbsD Escherichia coli str. K-12 substr. MG1655 putative cytoplasmic sugar-binding protein NP_418204.2 3933351 D 511145 CDS NP_418205.1 16131617 948264 3933778..3935283 1 NC_000913.3 ATP-binding component of D-ribose high-affinity transport system; fused D-ribose transporter subunits of ABC superfamily: ATP-binding components 3935283 rbsA 948264 rbsA Escherichia coli str. K-12 substr. MG1655 fused D-ribose transporter subunits of ABC superfamily: ATP-binding components NP_418205.1 3933778 D 511145 CDS NP_418206.1 16131618 948262 3935288..3936253 1 NC_000913.3 D-ribose high-affinity transport system; membrane component of ABC superfamily; D-ribose transporter subunit 3936253 rbsC 948262 rbsC Escherichia coli str. K-12 substr. MG1655 D-ribose transporter subunit NP_418206.1 3935288 D 511145 CDS NP_418207.1 16131619 948261 3936278..3937168 1 NC_000913.3 D-ribose periplasmic binding protein; periplasmic-binding compoent of ABC superfamily; D-ribose transporter subunit 3937168 rbsB 948261 rbsB Escherichia coli str. K-12 substr. MG1655 D-ribose transporter subunit NP_418207.1 3936278 D 511145 CDS NP_418208.1 16131620 948260 3937294..3938223 1 NC_000913.3 ribokinase 3938223 rbsK 948260 rbsK Escherichia coli str. K-12 substr. MG1655 ribokinase NP_418208.1 3937294 D 511145 CDS NP_418209.1 16131621 948266 3938227..3939219 1 NC_000913.3 regulator for rbs operon; transcriptional repressor of ribose metabolism 3939219 rbsR 948266 rbsR Escherichia coli str. K-12 substr. MG1655 transcriptional repressor of ribose metabolism NP_418209.1 3938227 D 511145 CDS NP_418210.1 16131622 948265 complement(3939185..3940612) 1 NC_000913.3 putative transport protein (MFS family); high copy suppressor of RspA: relieves RspA-mediated reduction of sigma(S) levels; overexpression also reduces MetE activity; effect proposed to be via an elevation in levels of homocysteine, causing a concomitant increase in homocysteine thiolactone; overexpression has no effect on resistance to a variety of toxic compounds; overexpression has no effect on resistance to a variety of toxic compounds; putative multidrug or homocysteine efflux system 3940612 hsrA 948265 hsrA Escherichia coli str. K-12 substr. MG1655 putative multidrug or homocysteine efflux system NP_418210.1 3939185 R 511145 CDS YP_026245.1 49176401 948263 complement(3940635..3941327) 1 NC_000913.3 putative transcriptional regulator 3941327 yieP 948263 yieP Escherichia coli str. K-12 substr. MG1655 putative transcriptional regulator YP_026245.1 3940635 R 511145 CDS YP_026246.1 49176402 2847698 complement(3947128..3947967) 1 NC_000913.3 transcriptional regulator of the flhDC operon; flhDC operon transcriptional repressor 3947967 hdfR 2847698 hdfR Escherichia coli str. K-12 substr. MG1655 flhDC operon transcriptional repressor YP_026246.1 3947128 R 511145 CDS NP_418213.1 16131624 948274 3948086..3948424 1 NC_000913.3 UPF0438 family protein 3948424 yifE 948274 yifE Escherichia coli str. K-12 substr. MG1655 UPF0438 family protein NP_418213.1 3948086 D 511145 CDS NP_418214.2 145698331 948282 complement(3948449..3949969) 1 NC_000913.3 putative 2-component regulator; bifunctional magnesium chelatase family protein and putative transcriptional regulator 3949969 yifB 948282 yifB Escherichia coli str. K-12 substr. MG1655 bifunctional magnesium chelatase family protein and putative transcriptional regulator NP_418214.2 3948449 R 511145 CDS NP_418215.1 16131626 948283 3950322..3950420 1 NC_000913.3 ilvGEDA operon leader peptide; ilvG operon leader peptide 3950420 ilvL 948283 ilvL Escherichia coli str. K-12 substr. MG1655 ilvG operon leader peptide NP_418215.1 3950322 D 511145 CDS YP_002791259.1 226524760 7751639 3950507..3950557 1 NC_000913.3 uncharacterized protein 3950557 ilvX 7751639 ilvX Escherichia coli str. K-12 substr. MG1655 uncharacterized protein YP_002791259.1 3950507 D 511145 CDS b4488 2847699 join(3950560..3951543,3951542..3952204) 1 NC_000913.3 pseudogene, acetolactate synthase 2 large subunit, valine-insensitive; acetolactate synthase II, large subunit, cryptic, interrupted; <NULL_VALUE> 3952204 ilvG 2847699 ilvG Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 3950560 D 511145 CDS NP_418217.1 16131627 948279 3952201..3952464 1 NC_000913.3 acetolactate synthase II, valine insensitive, small subunit; acetolactate synthase 2 small subunit 3952464 ilvM 948279 ilvM Escherichia coli str. K-12 substr. MG1655 acetolactate synthase 2 small subunit NP_418217.1 3952201 D 511145 CDS YP_026247.1 49176403 948278 3952484..3953413 1 NC_000913.3 branched-chain amino-acid aminotransferase 3953413 ilvE 948278 ilvE Escherichia coli str. K-12 substr. MG1655 branched-chain amino-acid aminotransferase YP_026247.1 3952484 D 511145 CDS YP_026248.1 49176404 948277 3953478..3955328 1 NC_000913.3 dihydroxyacid dehydratase 3955328 ilvD 948277 ilvD Escherichia coli str. K-12 substr. MG1655 dihydroxyacid dehydratase YP_026248.1 3953478 D 511145 CDS NP_418220.1 16131630 948287 3955331..3956875 1 NC_000913.3 threonine deaminase (dehydratase); L-threonine dehydratase, biosynthetic; also known as threonine deaminase 3956875 ilvA 948287 ilvA Escherichia coli str. K-12 substr. MG1655 L-threonine dehydratase, biosynthetic; also known as threonine deaminase NP_418220.1 3955331 D 511145 CDS NP_418221.1 16131631 948284 complement(3956927..3957820) 1 NC_000913.3 positive regulator for ilvC; transcriptional activator of ilvC; autorepressor 3957820 ilvY 948284 ilvY Escherichia coli str. K-12 substr. MG1655 transcriptional activator of ilvC; autorepressor NP_418221.1 3956927 R 511145 CDS NP_418222.1 16131632 948286 3957970..3959445 1 NC_000913.3 ketol-acid reductoisomerase; ketol-acid reductoisomerase, NAD(P)-binding 3959445 ilvC 948286 ilvC Escherichia coli str. K-12 substr. MG1655 ketol-acid reductoisomerase, NAD(P)-binding NP_418222.1 3957970 D 511145 CDS NP_418223.1 16131633 948285 complement(3959532..3959813) 1 NC_000913.3 peptidyl-prolyl cis-trans isomerase C (rotamase C) 3959813 ppiC 948285 ppiC Escherichia coli str. K-12 substr. MG1655 peptidyl-prolyl cis-trans isomerase C (rotamase C) NP_418223.1 3959532 R 511145 CDS b3777 2847676 complement(join(3960012..3960254,3960254..3960460)) 1 NC_000913.3 PemK toxin family pseudogene; <NULL_VALUE> 3960460 yifN 2847676 yifN Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 3960012 R 511145 CDS YP_026251.1 49176407 948292 3960677..3962698 1 NC_000913.3 rep helicase, a single-stranded DNA dependent ATPase; DNA helicase and single-stranded DNA-dependent ATPase 3962698 rep 948292 rep Escherichia coli str. K-12 substr. MG1655 DNA helicase and single-stranded DNA-dependent ATPase YP_026251.1 3960677 D 511145 CDS YP_026252.1 49176408 948291 complement(3962745..3964229) 1 NC_000913.3 guanosine pentaphosphatase; exopolyphosphatase; guanosine pentaphosphatase/exopolyphosphatase 3964229 gpp 948291 gpp Escherichia coli str. K-12 substr. MG1655 guanosine pentaphosphatase/exopolyphosphatase YP_026252.1 3962745 R 511145 CDS NP_418227.1 16131636 948290 complement(3964365..3965630) 1 NC_000913.3 putative ATP-dependent RNA helicase; ATP-dependent RNA helicase 3965630 rhlB 948290 rhlB Escherichia coli str. K-12 substr. MG1655 ATP-dependent RNA helicase NP_418227.1 3964365 R 511145 CDS NP_418228.2 67005950 948289 3965761..3966090 1 NC_000913.3 thioredoxin 1 3966090 trxA 948289 trxA Escherichia coli str. K-12 substr. MG1655 thioredoxin 1 NP_418228.2 3965761 D 511145 CDS NP_418230.1 16131639 948297 3966417..3967676 1 NC_000913.3 transcription termination factor Rho; polarity suppressor; transcription termination factor 3967676 rho 948297 rho Escherichia coli str. K-12 substr. MG1655 transcription termination factor NP_418230.1 3966417 D 511145 CDS NP_418231.1 16131640 948789 3967916..3969019 1 NC_000913.3 UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase 3969019 wecA 948789 wecA Escherichia coli str. K-12 substr. MG1655 UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase NP_418231.1 3967916 D 511145 CDS NP_418232.2 90111649 944815 3969031..3970077 1 NC_000913.3 modulator of enterobacterial common antigen (ECA) polysaccharide chain length; Entobacterial Common Antigen (ECA) polysaccharide chain length modulation protein 3970077 wzzE 944815 wzzE Escherichia coli str. K-12 substr. MG1655 Entobacterial Common Antigen (ECA) polysaccharide chain length modulation protein NP_418232.2 3969031 D 511145 CDS YP_026253.1 49176409 944789 3970133..3971263 1 NC_000913.3 UDP-N-acetyl glucosamine-2-epimerase 3971263 wecB 944789 wecB Escherichia coli str. K-12 substr. MG1655 UDP-N-acetyl glucosamine-2-epimerase YP_026253.1 3970133 D 511145 CDS YP_026254.1 49176410 948977 3971260..3972522 1 NC_000913.3 UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase; synthesis of enterobacterial common antigen (ECA); UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase 3972522 wecC 948977 wecC Escherichia coli str. K-12 substr. MG1655 UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase YP_026254.1 3971260 D 511145 CDS YP_026255.1 49176411 948300 3972522..3973589 1 NC_000913.3 dTDP-glucose 4,6-dehydratase 3973589 rffG 948300 rffG Escherichia coli str. K-12 substr. MG1655 dTDP-glucose 4,6-dehydratase YP_026255.1 3972522 D 511145 CDS NP_418236.1 16131645 948299 3973608..3974489 1 NC_000913.3 glucose-1-phosphate thymidylyltransferase 3974489 rffH 948299 rffH Escherichia coli str. K-12 substr. MG1655 glucose-1-phosphate thymidylyltransferase NP_418236.1 3973608 D 511145 CDS YP_026256.2 145698332 948298 3974467..3975141 1 NC_000913.3 putative acyltransferase, lipopolysaccharide biosynthesis protein; TDP-fucosamine acetyltransferase 3975141 wecD 948298 wecD Escherichia coli str. K-12 substr. MG1655 TDP-fucosamine acetyltransferase YP_026256.2 3974467 D 511145 CDS NP_418238.1 16131647 948296 3975146..3976276 1 NC_000913.3 TDP-4-oxo-6-deoxy-D-glucose transaminase 3976276 wecE 948296 wecE Escherichia coli str. K-12 substr. MG1655 TDP-4-oxo-6-deoxy-D-glucose transaminase NP_418238.1 3975146 D 511145 CDS NP_418239.1 16131648 948294 3976278..3977528 1 NC_000913.3 O-antigen translocase in LPS biosynthesis; O-antigen translocase 3977528 wzxE 948294 wzxE Escherichia coli str. K-12 substr. MG1655 O-antigen translocase NP_418239.1 3976278 D 511145 CDS YP_026257.1 49176413 2847677 3977525..3978604 1 NC_000913.3 TDP-Fuc4NAc:lipidII transferase; TDP-Fuc4NAc:lipidIIFuc4NAc transferase 3978604 wecF 2847677 wecF Escherichia coli str. K-12 substr. MG1655 TDP-Fuc4NAc:lipidIIFuc4NAc transferase YP_026257.1 3977525 D 511145 CDS NP_418241.1 16131649 948293 3978601..3979953 1 NC_000913.3 putative ECA polymerization protein; putative ECA polysaccharide chain elongation protein 3979953 wzyE 948293 wzyE Escherichia coli str. K-12 substr. MG1655 putative ECA polysaccharide chain elongation protein NP_418241.1 3978601 D 511145 CDS NP_418242.1 16131650 948301 3979956..3980696 1 NC_000913.3 probable UDP-N-acetyl-D-mannosaminuronic acid transferase; synthesis of enterobacterial common antigen (ECA); UDP-N-acetyl-D-mannosaminuronic acid transferase 3980696 wecG 948301 wecG Escherichia coli str. K-12 substr. MG1655 UDP-N-acetyl-D-mannosaminuronic acid transferase NP_418242.1 3979956 D 511145 CDS YP_026258.1 49176414 945400 3980887..3982272 1 NC_000913.3 putative amino acid/amine transport protein; putative APC family amino acid transporter 3982272 yifK 945400 yifK Escherichia coli str. K-12 substr. MG1655 putative APC family amino acid transporter YP_026258.1 3980887 D 511145 CDS YP_026259.1 49176415 949013 3982958..3984193 1 NC_000913.3 putative arylsulfatase regulator; putative AslA-specific sulfatase-maturating enzyme 3984193 aslB 949013 aslB Escherichia coli str. K-12 substr. MG1655 putative AslA-specific sulfatase-maturating enzyme YP_026259.1 3982958 D 511145 CDS NP_418245.1 16131653 949015 complement(3984352..3986007) 1 NC_000913.3 arylsulfatase; putative Ser-type periplasmic non-aryl sulfatase 3986007 aslA 949015 aslA Escherichia coli str. K-12 substr. MG1655 putative Ser-type periplasmic non-aryl sulfatase NP_418245.1 3984352 R 511145 CDS NP_418246.1 16131654 948311 complement(3986686..3987882) 1 NC_000913.3 a late step of protoheme IX synthesis; putative protoheme IX synthesis protein 3987882 hemY 948311 hemY Escherichia coli str. K-12 substr. MG1655 putative protoheme IX synthesis protein NP_418246.1 3986686 R 511145 CDS NP_418247.1 16131655 948446 complement(3987885..3989066) 1 NC_000913.3 uroporphyrinogen III methylase; putative uroporphyrinogen III methyltransferase 3989066 hemX 948446 hemX Escherichia coli str. K-12 substr. MG1655 putative uroporphyrinogen III methyltransferase NP_418247.1 3987885 R 511145 CDS NP_418248.1 16131656 948587 complement(3989088..3989828) 1 NC_000913.3 uroporphyrinogen III synthase 3989828 hemD 948587 hemD Escherichia coli str. K-12 substr. MG1655 uroporphyrinogen III synthase NP_418248.1 3989088 R 511145 CDS YP_026260.1 49176416 947759 complement(3989825..3990766) 1 NC_000913.3 porphobilinogen deaminase = hydroxymethylbilane synthase; hydroxymethylbilane synthase 3990766 hemC 947759 hemC Escherichia coli str. K-12 substr. MG1655 hydroxymethylbilane synthase YP_026260.1 3989825 R 511145 CDS NP_418250.1 16131658 947755 3991153..3993699 1 NC_000913.3 adenylate cyclase 3993699 cyaA 947755 cyaA Escherichia coli str. K-12 substr. MG1655 adenylate cyclase NP_418250.1 3991153 D 511145 CDS NP_418251.1 16131659 947754 complement(3993739..3994059) 1 NC_000913.3 iron-binding frataxin homolog; cyaY is expressed; neither knock-out nor overexpression of cyaY in Escherichia coli affects cellular iron content or sensitivity to oxidants; possibly involved in maintaining the intracellular iron pool in a soluble, non-toxic and bio-available form for biosynthetic pathways, while preventing the participation of iron in oxidative damage; iron-dependent inhibitor of iron-sulfur cluster formation; frataxin; iron-binding and oxidizing protein 3994059 cyaY 947754 cyaY Escherichia coli str. K-12 substr. MG1655 iron-dependent inhibitor of iron-sulfur cluster formation; frataxin; iron-binding and oxidizing protein NP_418251.1 3993739 R 511145 CDS YP_588473.1 94541130 1450304 3994522..3994725 1 NC_000913.3 putative lipoprotein 3994725 yifL 1450304 yifL Escherichia coli str. K-12 substr. MG1655 putative lipoprotein YP_588473.1 3994522 D 511145 CDS NP_418254.2 90111650 948364 3994762..3995586 1 NC_000913.3 diaminopimelate epimerase 3995586 dapF 948364 dapF Escherichia coli str. K-12 substr. MG1655 diaminopimelate epimerase NP_418254.2 3994762 D 511145 CDS NP_418255.1 16131662 948359 3995583..3996290 1 NC_000913.3 DUF484 family protein 3996290 yigA 948359 yigA Escherichia coli str. K-12 substr. MG1655 DUF484 family protein NP_418255.1 3995583 D 511145 CDS NP_418256.1 16131663 948355 3996287..3997183 1 NC_000913.3 site-specific recombinase, acts on cer sequence of ColE1, effects chromosome segregation at cell division; site-specific tyrosine recombinase 3997183 xerC 948355 xerC Escherichia coli str. K-12 substr. MG1655 site-specific tyrosine recombinase NP_418256.1 3996287 D 511145 CDS NP_418257.1 16131664 948357 3997183..3997899 1 NC_000913.3 putative phosphatase; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase; pyrimidine phosphatase; riboflavin synthesis 3997899 yigB 948357 yigB Escherichia coli str. K-12 substr. MG1655 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase; pyrimidine phosphatase; riboflavin synthesis NP_418257.1 3997183 D 511145 CDS NP_418258.1 16131665 948347 3997983..4000145 1 NC_000913.3 DNA-dependent ATPase I and helicase II 4000145 uvrD 948347 uvrD Escherichia coli str. K-12 substr. MG1655 DNA-dependent ATPase I and helicase II NP_418258.1 3997983 D 511145 CDS YP_026261.1 49176417 2847679 complement(4000292..4001056) 1 NC_000913.3 DUF2233 family protein 4001056 yigE 2847679 yigE Escherichia coli str. K-12 substr. MG1655 DUF2233 family protein YP_026261.1 4000292 R 511145 CDS NP_418260.1 16131666 948351 4001426..4002376 1 NC_000913.3 Mg2+ transport, system I; magnesium/nickel/cobalt transporter 4002376 corA 948351 corA Escherichia coli str. K-12 substr. MG1655 magnesium/nickel/cobalt transporter NP_418260.1 4001426 D 511145 CDS NP_418261.1 16131667 948340 complement(4002419..4002799) 1 NC_000913.3 putative inner membrane protein 4002799 yigF 948340 yigF Escherichia coli str. K-12 substr. MG1655 putative inner membrane protein NP_418261.1 4002419 R 511145 CDS NP_418262.2 90111651 948344 complement(4002813..4003193) 1 NC_000913.3 PRK11371 family inner membrane protein 4003193 yigG 948344 yigG Escherichia coli str. K-12 substr. MG1655 PRK11371 family inner membrane protein NP_418262.2 4002813 R 511145 CDS YP_026262.1 49176418 948330 complement(4003288..4004178) 1 NC_000913.3 putative chloramphenical resistance permease 4004178 rarD 948330 rarD Escherichia coli str. K-12 substr. MG1655 putative chloramphenical resistance permease YP_026262.1 4003288 R 511145 CDS NP_418264.4 90111652 948338 complement(4004230..4004697) 1 NC_000913.3 4HBT thioesterase family protein 4004697 yigI 948338 yigI Escherichia coli str. K-12 substr. MG1655 4HBT thioesterase family protein NP_418264.4 4004230 R 511145 CDS NP_418265.1 16131671 948307 4004862..4005731 1 NC_000913.3 outer membrane phospholipase A 4005731 pldA 948307 pldA Escherichia coli str. K-12 substr. MG1655 outer membrane phospholipase A NP_418265.1 4004862 D 511145 CDS YP_026263.3 162135918 948318 4005864..4007693 1 NC_000913.3 ATP-dependent DNA helicase 4007693 recQ 948318 recQ Escherichia coli str. K-12 substr. MG1655 ATP-dependent DNA helicase YP_026263.3 4005864 D 511145 CDS YP_026264.1 49176421 948317 4007757..4008377 1 NC_000913.3 amino acid exporter (threonine); threonine efflux protein (RhtB family); threonine efflux pump 4008377 rhtC 948317 rhtC Escherichia coli str. K-12 substr. MG1655 threonine efflux pump YP_026264.1 4007757 D 511145 CDS YP_026265.1 49176422 948316 complement(4008439..4009059) 1 NC_000913.3 homoserine, homoserine lactone and S-methyl-methionine efflux pump 4009059 rhtB 948316 rhtB Escherichia coli str. K-12 substr. MG1655 homoserine, homoserine lactone and S-methyl-methionine efflux pump YP_026265.1 4008439 R 511145 CDS YP_026266.1 49176423 948314 4009170..4010192 1 NC_000913.3 lysophospholipase L2 4010192 pldB 948314 pldB Escherichia coli str. K-12 substr. MG1655 lysophospholipase L2 YP_026266.1 4009170 D 511145 CDS YP_026267.1 49176424 2847768 4010200..4011000 1 NC_000913.3 conserved protein, phosphatase-like domain; pyridoxal phosphate phosphatase 4011000 yigL 2847768 yigL Escherichia coli str. K-12 substr. MG1655 pyridoxal phosphate phosphatase YP_026267.1 4010200 D 511145 CDS NP_418271.1 16131676 948309 4011076..4011975 1 NC_000913.3 putative inner membrane EamA-like transporter 4011975 yigM 948309 yigM Escherichia coli str. K-12 substr. MG1655 putative inner membrane EamA-like transporter NP_418271.1 4011076 D 511145 CDS NP_418272.1 16131677 948310 complement(4011863..4012816) 1 NC_000913.3 regulator for metE and metH; methionine biosynthesis regulon transcriptional regulator 4012816 metR 948310 metR Escherichia coli str. K-12 substr. MG1655 methionine biosynthesis regulon transcriptional regulator NP_418272.1 4011863 R 511145 CDS NP_418273.1 16131678 948323 4013053..4015314 1 NC_000913.3 tetrahydropteroyltriglutamate methyltransferase; 5-methyltetrahydropteroyltriglutamate- homocysteine S-methyltransferase 4015314 metE 948323 metE Escherichia coli str. K-12 substr. MG1655 5-methyltetrahydropteroyltriglutamate- homocysteine S-methyltransferase NP_418273.1 4013053 D 511145 CDS YP_026268.1 49176425 948320 complement(4015354..4016169) 1 NC_000913.3 putative enzyme; putative carboxymethylenebutenolidase 4016169 ysgA 948320 ysgA Escherichia coli str. K-12 substr. MG1655 putative carboxymethylenebutenolidase YP_026268.1 4015354 R 511145 CDS NP_418275.1 16131680 948987 4016431..4017192 1 NC_000913.3 uridine phosphorylase 4017192 udp 948987 udp Escherichia coli str. K-12 substr. MG1655 uridine phosphorylase NP_418275.1 4016431 D 511145 CDS NP_418276.1 16131681 948966 4017333..4018760 1 NC_000913.3 putative alpha helix chain; DNA recombination protein 4018760 rmuC 948966 rmuC Escherichia coli str. K-12 substr. MG1655 DNA recombination protein NP_418276.1 4017333 D 511145 CDS YP_026269.1 49176426 948926 4018855..4019610 1 NC_000913.3 2-octaprenyl-6-methoxy-1,4-benzoquinone --> 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinone; bifunctional 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase/ S-adenosylmethionine:2-DMK methyltransferase 4019610 ubiE 948926 ubiE Escherichia coli str. K-12 substr. MG1655 bifunctional 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase/ S-adenosylmethionine:2-DMK methyltransferase YP_026269.1 4018855 D 511145 CDS NP_418278.1 16131683 948915 4019624..4020229 1 NC_000913.3 aerobic ubiquinone synthesis protein, SCP2 family protein 4020229 ubiJ 948915 ubiJ Escherichia coli str. K-12 substr. MG1655 aerobic ubiquinone synthesis protein, SCP2 family protein NP_418278.1 4019624 D 511145 CDS NP_418279.1 16131684 948322 4020226..4021866 1 NC_000913.3 regulator of octaprenylphenol hydroxylation, ubiquinone synthesis; regulator of 2'-N-acetyltransferase; putative ABC1 family protein kinase 4021866 ubiB 948322 ubiB Escherichia coli str. K-12 substr. MG1655 regulator of octaprenylphenol hydroxylation, ubiquinone synthesis; regulator of 2'-N-acetyltransferase; putative ABC1 family protein kinase NP_418279.1 4020226 D 511145 CDS NP_418280.4 90111653 948321 4021945..4022214 1 NC_000913.3 TatABCE protein translocation system subunit 4022214 tatA 948321 tatA Escherichia coli str. K-12 substr. MG1655 TatABCE protein translocation system subunit NP_418280.4 4021945 D 511145 CDS YP_026270.1 49176428 948319 4022218..4022733 1 NC_000913.3 TatABCE protein translocation system subunit 4022733 tatB 948319 tatB Escherichia coli str. K-12 substr. MG1655 TatABCE protein translocation system subunit YP_026270.1 4022218 D 511145 CDS NP_418282.1 16131687 948328 4022736..4023512 1 NC_000913.3 TatABCE protein translocation system subunit 4023512 tatC 948328 tatC Escherichia coli str. K-12 substr. MG1655 TatABCE protein translocation system subunit NP_418282.1 4022736 D 511145 CDS YP_026271.1 49176429 2847752 4023554..4024336 1 NC_000913.3 cytoplasmic Dnase; quality control of Tat-exported FeS proteins; Mg-dependent cytoplasmic DNase 4024336 tatD 2847752 tatD Escherichia coli str. K-12 substr. MG1655 quality control of Tat-exported FeS proteins; Mg-dependent cytoplasmic DNase YP_026271.1 4023554 D 511145 CDS NP_418284.1 16131688 948327 complement(4024333..4024821) 1 NC_000913.3 transcriptional activator affecting biosynthesis of lipopolysaccharide core, F pilin, and haemolysin; transcription antitermination protein 4024821 rfaH 948327 rfaH Escherichia coli str. K-12 substr. MG1655 transcription antitermination protein NP_418284.1 4024333 R 511145 CDS NP_418285.1 16131689 948326 4024988..4026481 1 NC_000913.3 3-octaprenyl-4-hydroxybenzoate decarboxylase 4026481 ubiD 948326 ubiD Escherichia coli str. K-12 substr. MG1655 3-octaprenyl-4-hydroxybenzoate decarboxylase NP_418285.1 4024988 D 511145 CDS NP_418286.1 16131690 948325 4026527..4027228 1 NC_000913.3 ferrisiderophore reductase; flavin reductase (NADPH:flavin oxidoreductase); NAD(P)H-flavin reductase 4027228 fre 948325 fre Escherichia coli str. K-12 substr. MG1655 NAD(P)H-flavin reductase NP_418286.1 4026527 D 511145 CDS YP_026272.1 49176430 948324 complement(4027609..4028772) 1 NC_000913.3 thiolase I; 3-ketoacyl-CoA thiolase; acetyl-CoA transferase; 3-ketoacyl-CoA thiolase (thiolase I) 4028772 fadA 948324 fadA Escherichia coli str. K-12 substr. MG1655 3-ketoacyl-CoA thiolase (thiolase I) YP_026272.1 4027609 R 511145 CDS NP_418288.1 16131692 948336 complement(4028782..4030971) 1 NC_000913.3 4-enzyme protein: 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase; delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase; enoyl-CoA hydratase; fused 3-hydroxybutyryl-CoA epimerase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase 4030971 fadB 948336 fadB Escherichia coli str. K-12 substr. MG1655 fused 3-hydroxybutyryl-CoA epimerase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase NP_418288.1 4028782 R 511145 CDS NP_418289.1 16131693 948335 4031161..4032492 1 NC_000913.3 proline dipeptidase 4032492 pepQ 948335 pepQ Escherichia coli str. K-12 substr. MG1655 proline dipeptidase NP_418289.1 4031161 D 511145 CDS NP_418290.4 90111654 948334 4032492..4033106 1 NC_000913.3 UPF0029 family protein 4033106 yigZ 948334 yigZ Escherichia coli str. K-12 substr. MG1655 UPF0029 family protein NP_418290.4 4032492 D 511145 CDS YP_026273.1 49176432 948333 4033145..4034596 1 NC_000913.3 potassium uptake, requires TrkE; potassium transporter 4034596 trkH 948333 trkH Escherichia coli str. K-12 substr. MG1655 potassium transporter YP_026273.1 4033145 D 511145 CDS NP_418292.1 16131696 948331 4034608..4035153 1 NC_000913.3 protoporphyrin oxidase; protoporphyrin oxidase, flavoprotein 4035153 hemG 948331 hemG Escherichia coli str. K-12 substr. MG1655 protoporphyrin oxidase, flavoprotein NP_418292.1 4034608 D 511145 CDS NP_418293.2 145698333 948343 complement(4040906..4041433) 1 NC_000913.3 molybdopterin-guanine dinucleotide biosynthesis protein B 4041433 mobB 948343 mobB Escherichia coli str. K-12 substr. MG1655 molybdopterin-guanine dinucleotide biosynthesis protein B NP_418293.2 4040906 R 511145 CDS NP_418294.1 16131698 948349 complement(4041415..4041999) 1 NC_000913.3 molybdopterin ---> molybdopterin-guanine dinucleotide, protein Ar; molybdopterin-guanine dinucleotide synthase 4041999 mobA 948349 mobA Escherichia coli str. K-12 substr. MG1655 molybdopterin-guanine dinucleotide synthase NP_418294.1 4041415 R 511145 CDS NP_418295.1 16131699 948348 4042069..4042338 1 NC_000913.3 DUF1040 protein YihD 4042338 yihD 948348 yihD Escherichia coli str. K-12 substr. MG1655 DUF1040 protein YihD NP_418295.1 4042069 D 511145 CDS NP_418296.1 16131700 948346 4042415..4043401 1 NC_000913.3 stress response kinase A; MazF antagonist; Thr/Ser kinase involved in Cpx stress response 4043401 srkA 948346 srkA Escherichia coli str. K-12 substr. MG1655 stress response kinase A; MazF antagonist; Thr/Ser kinase involved in Cpx stress response NP_418296.1 4042415 D 511145 CDS NP_418297.1 16131701 948353 4043418..4044044 1 NC_000913.3 protein disulfide isomerase I, essential for cytochrome c synthesis and formate-dependent reduction; periplasmic protein disulfide isomerase I 4044044 dsbA 948353 dsbA Escherichia coli str. K-12 substr. MG1655 periplasmic protein disulfide isomerase I NP_418297.1 4043418 D 511145 CDS NP_418298.4 90111655 948352 4044199..4045629 1 NC_000913.3 putative GTP-binding protein; DUF945 family protein 4045629 yihF 948352 yihF Escherichia coli str. K-12 substr. MG1655 DUF945 family protein NP_418298.4 4044199 D 511145 CDS NP_418299.1 16131703 948350 complement(4045670..4046602) 1 NC_000913.3 putative endonuclease; inner membrane protein, inner membrane acyltransferase 4046602 yihG 948350 yihG Escherichia coli str. K-12 substr. MG1655 inner membrane protein, inner membrane acyltransferase NP_418299.1 4045670 R 511145 CDS NP_418300.1 16131704 948356 4046966..4049752 1 NC_000913.3 DNA polymerase I, 3' --> 5' polymerase, 5' --> 3' and 3' --> 5' exonuclease; fused DNA polymerase I 5'->3' polymerase/3'->5' exonuclease/5'->3' exonuclease 4049752 polA 948356 polA Escherichia coli str. K-12 substr. MG1655 fused DNA polymerase I 5'->3' polymerase/3'->5' exonuclease/5'->3' exonuclease NP_418300.1 4046966 D 511145 CDS NP_418301.3 145698334 948358 complement(4050133..4050765) 1 NC_000913.3 GTPase essential for cell cycle; cell division GTP-binding protein 4050765 yihA 948358 yihA Escherichia coli str. K-12 substr. MG1655 cell division GTP-binding protein NP_418301.3 4050133 R 511145 CDS NP_418302.1 16131706 948363 4051347..4051856 1 NC_000913.3 activator of Der GTPase 4051856 yihI 948363 yihI Escherichia coli str. K-12 substr. MG1655 activator of Der GTPase NP_418302.1 4051347 D 511145 CDS NP_418303.2 90111657 948362 4052045..4053418 1 NC_000913.3 O2-independent coproporphyrinogen III oxidase; coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen-independent 4053418 hemN 948362 hemN Escherichia coli str. K-12 substr. MG1655 coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen-independent NP_418303.2 4052045 D 511145 CDS YP_002791260.1 226524761 7751621 complement(4053647..4053757) 1 NC_000913.3 uncharacterized protein 4053757 yshB 7751621 yshB Escherichia coli str. K-12 substr. MG1655 uncharacterized protein YP_002791260.1 4053647 R 511145 CDS NP_418304.1 16131708 948361 complement(4053869..4055278) 1 NC_000913.3 response regulator for gln (sensor glnL) (nitrogen regulator I, NRI); fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein 4055278 glnG 948361 glnG Escherichia coli str. K-12 substr. MG1655 fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein NP_418304.1 4053869 R 511145 CDS NP_418305.1 16131709 948360 complement(4055290..4056339) 1 NC_000913.3 histidine protein kinase sensor for GlnG regulator (nitrogen regulator II, NRII); sensory histidine kinase in two-component regulatory system with GlnG 4056339 glnL 948360 glnL Escherichia coli str. K-12 substr. MG1655 sensory histidine kinase in two-component regulatory system with GlnG NP_418305.1 4055290 R 511145 CDS NP_418306.1 16131710 948370 complement(4056625..4058034) 1 NC_000913.3 glutamine synthetase 4058034 glnA 948370 glnA Escherichia coli str. K-12 substr. MG1655 glutamine synthetase NP_418306.1 4056625 R 511145 CDS YP_026274.1 49176434 948369 4058407..4060230 1 NC_000913.3 GTP-binding protein 4060230 typA 948369 typA Escherichia coli str. K-12 substr. MG1655 GTP-binding protein YP_026274.1 4058407 D 511145 CDS NP_418308.1 16131712 948368 4060447..4061157 1 NC_000913.3 putative transcriptional regulator; putative DNA-binding transcriptional regulator 4061157 yihL 948368 yihL Escherichia coli str. K-12 substr. MG1655 putative DNA-binding transcriptional regulator NP_418308.1 4060447 D 511145 CDS NP_418309.1 16131713 948367 4061165..4062145 1 NC_000913.3 putative sugar phosphate isomerase 4062145 yihM 948367 yihM Escherichia coli str. K-12 substr. MG1655 putative sugar phosphate isomerase NP_418309.1 4061165 D 511145 CDS NP_418310.1 16131714 948365 4062247..4063512 1 NC_000913.3 putative resistance protein (transport); MFS transporter family protein 4063512 yihN 948365 yihN Escherichia coli str. K-12 substr. MG1655 MFS transporter family protein NP_418310.1 4062247 D 511145 CDS NP_418311.1 16131715 948366 complement(4063603..4064295) 1 NC_000913.3 outer membrane porin L 4064295 ompL 948366 ompL Escherichia coli str. K-12 substr. MG1655 outer membrane porin L NP_418311.1 4063603 R 511145 CDS YP_026275.1 49176435 948377 complement(4064363..4065766) 1 NC_000913.3 putative permease; putative transporter 4065766 yihO 948377 yihO Escherichia coli str. K-12 substr. MG1655 putative transporter YP_026275.1 4064363 R 511145 CDS NP_418313.4 145698335 948371 complement(4065809..4067194) 1 NC_000913.3 putative permease; putative transporter 4067194 yihP 948371 yihP Escherichia coli str. K-12 substr. MG1655 putative transporter NP_418313.4 4065809 R 511145 CDS NP_418314.1 16131718 948376 complement(4067240..4069276) 1 NC_000913.3 putative glycosidase; alpha-glucosidase 4069276 yihQ 948376 yihQ Escherichia coli str. K-12 substr. MG1655 alpha-glucosidase NP_418314.1 4067240 R 511145 CDS NP_418315.3 49176437 948375 complement(4069475..4070401) 1 NC_000913.3 putative aldose-1-epimerase; mutarotase superfamily protein, YihR family 4070401 yihR 948375 yihR Escherichia coli str. K-12 substr. MG1655 mutarotase superfamily protein, YihR family NP_418315.3 4069475 R 511145 CDS NP_418316.4 90111658 948374 complement(4070515..4071756) 1 NC_000913.3 aldose-ketose isomerase; D-mannose isomerase 4071756 yihS 948374 yihS Escherichia coli str. K-12 substr. MG1655 aldose-ketose isomerase; D-mannose isomerase NP_418316.4 4070515 R 511145 CDS NP_418317.1 16131721 948373 complement(4071773..4072651) 1 NC_000913.3 putative aldolase 4072651 yihT 948373 yihT Escherichia coli str. K-12 substr. MG1655 putative aldolase NP_418317.1 4071773 R 511145 CDS NP_418318.1 16131722 948372 complement(4072675..4073571) 1 NC_000913.3 putative dehydrogenase; gamma-hydroxybutyrate dehydrogenase, NADH-dependent 4073571 yihU 948372 yihU Escherichia coli str. K-12 substr. MG1655 gamma-hydroxybutyrate dehydrogenase, NADH-dependent NP_418318.1 4072675 R 511145 CDS NP_418319.2 90111659 948382 4073739..4074635 1 NC_000913.3 putative kinase; putative sugar kinase 4074635 yihV 948382 yihV Escherichia coli str. K-12 substr. MG1655 putative sugar kinase NP_418319.2 4073739 D 511145 CDS NP_418320.2 90111660 948381 4074669..4075454 1 NC_000913.3 putative DEOR-type transcriptional regulator; DeoR family putative transcriptional regulator 4075454 yihW 948381 yihW Escherichia coli str. K-12 substr. MG1655 DeoR family putative transcriptional regulator NP_418320.2 4074669 D 511145 CDS NP_418321.4 90111661 948380 4075553..4076152 1 NC_000913.3 putative phosphatase; alpha-D-Glucose-1-P phosphatase, anomer-specific 4076152 yihX 948380 yihX Escherichia coli str. K-12 substr. MG1655 alpha-D-Glucose-1-P phosphatase, anomer-specific NP_418321.4 4075553 D 511145 CDS NP_418322.1 16131726 948379 4076146..4077018 1 NC_000913.3 tRNA processing exoribonuclease BN; BrkB family putative transporter, inner membrane protein 4077018 yihY 948379 yihY Escherichia coli str. K-12 substr. MG1655 BrkB family putative transporter, inner membrane protein NP_418322.1 4076146 D 511145 CDS NP_418323.1 16131727 948378 4077015..4077452 1 NC_000913.3 D-tyr-tRNA(Tyr) deacylase 4077452 dtd 948378 dtd Escherichia coli str. K-12 substr. MG1655 D-tyr-tRNA(Tyr) deacylase NP_418323.1 4077015 D 511145 CDS NP_418324.1 16131728 948387 4077449..4078438 1 NC_000913.3 putative acetyltransferase 4078438 yiiD 948387 yiiD Escherichia coli str. K-12 substr. MG1655 putative acetyltransferase NP_418324.1 4077449 D 511145 CDS NP_418325.3 145698336 948386 4079297..4079509 1 NC_000913.3 CopG family putative transcriptional regulator 4079509 yiiE 948386 yiiE Escherichia coli str. K-12 substr. MG1655 CopG family putative transcriptional regulator NP_418325.3 4079297 D 511145 CDS NP_418326.2 90111663 948385 4079751..4079969 1 NC_000913.3 putative thymol sensitivity protein, CopG family putative transcriptional regulator 4079969 yiiF 948385 yiiF Escherichia coli str. K-12 substr. MG1655 putative thymol sensitivity protein, CopG family putative transcriptional regulator NP_418326.2 4079751 D 511145 CDS NP_418327.1 16131731 948384 complement(4080299..4081228) 1 NC_000913.3 affects formate dehydrogenase-N; formate dehydrogenase formation protein 4081228 fdhE 948384 fdhE Escherichia coli str. K-12 substr. MG1655 formate dehydrogenase formation protein NP_418327.1 4080299 R 511145 CDS NP_418328.1 16131732 948383 complement(4081225..4081860) 1 NC_000913.3 formate dehydrogenase, cytochrome B556 (FDO) subunit; formate dehydrogenase-O, cytochrome b556 subunit 4081860 fdoI 948383 fdoI Escherichia coli str. K-12 substr. MG1655 formate dehydrogenase-O, cytochrome b556 subunit NP_418328.1 4081225 R 511145 CDS NP_418329.1 16131733 948395 complement(4081857..4082759) 1 NC_000913.3 formate dehydrogenase-O, iron-sulfur subunit; formate dehydrogenase-O, Fe-S subunit 4082759 fdoH 948395 fdoH Escherichia coli str. K-12 substr. MG1655 formate dehydrogenase-O, Fe-S subunit NP_418329.1 4081857 R 511145 CDS NP_418330.1 16131734 948394 complement(4082772..4085822) 1 NC_000913.3 formate dehydrogenase-O, major subunit; formate dehydrogenase-O, large subunit 4085822 fdoG 948394 fdoG Escherichia coli str. K-12 substr. MG1655 formate dehydrogenase-O, large subunit NP_418330.1 4082772 R 511145 CDS NP_418331.1 16131735 948393 4086016..4086849 1 NC_000913.3 affects formate dehydrogenase-N; formate dehydrogenase formation protein 4086849 fdhD 948393 fdhD Escherichia coli str. K-12 substr. MG1655 formate dehydrogenase formation protein NP_418331.1 4086016 D 511145 CDS NP_418332.1 16131736 948392 4087002..4088057 1 NC_000913.3 DUF3829 family lipoprotein 4088057 yiiG 948392 yiiG Escherichia coli str. K-12 substr. MG1655 DUF3829 family lipoprotein NP_418332.1 4087002 D 511145 CDS NP_418333.1 16131737 948389 complement(4088107..4089855) 1 NC_000913.3 putative frv operon regulatory protein; putative frv operon regulator; contains a PTS EIIA domain 4089855 frvR 948389 frvR Escherichia coli str. K-12 substr. MG1655 putative frv operon regulator; contains a PTS EIIA domain NP_418333.1 4088107 R 511145 CDS NP_418334.1 16131738 948388 complement(4089855..4090925) 1 NC_000913.3 frv operon protein; putative peptidase 4090925 frvX 948388 frvX Escherichia coli str. K-12 substr. MG1655 putative peptidase NP_418334.1 4089855 R 511145 CDS NP_418335.4 90111664 948390 complement(4090915..4092366) 1 NC_000913.3 PTS system, fructose-like enzyme IIBC component; putative PTS enzyme, IIB component/IIC component 4092366 frvB 948390 frvB Escherichia coli str. K-12 substr. MG1655 putative PTS enzyme, IIB component/IIC component NP_418335.4 4090915 R 511145 CDS NP_418336.1 16131740 948391 complement(4092377..4092823) 1 NC_000913.3 PTS system, fructose-specific IIA component; putative enzyme IIA component of PTS 4092823 frvA 948391 frvA Escherichia coli str. K-12 substr. MG1655 putative enzyme IIA component of PTS NP_418336.1 4092377 R 511145 CDS NP_418337.1 16131741 948402 complement(4093124..4093438) 1 NC_000913.3 L-rhamnose mutarotase 4093438 rhaM 948402 rhaM Escherichia coli str. K-12 substr. MG1655 L-rhamnose mutarotase NP_418337.1 4093124 R 511145 CDS NP_418338.1 16131742 948401 complement(4093448..4094272) 1 NC_000913.3 rhamnulose-phosphate aldolase; rhamnulose-1-phosphate aldolase 4094272 rhaD 948401 rhaD Escherichia coli str. K-12 substr. MG1655 rhamnulose-1-phosphate aldolase NP_418338.1 4093448 R 511145 CDS YP_026276.1 49176441 948400 complement(4094723..4095982) 1 NC_000913.3 L-rhamnose isomerase 4095982 rhaA 948400 rhaA Escherichia coli str. K-12 substr. MG1655 L-rhamnose isomerase YP_026276.1 4094723 R 511145 CDS NP_418340.1 16131744 948399 complement(4095979..4097448) 1 NC_000913.3 rhamnulokinase 4097448 rhaB 948399 rhaB Escherichia coli str. K-12 substr. MG1655 rhamnulokinase NP_418340.1 4095979 R 511145 CDS NP_418341.1 16131745 948397 4097736..4098572 1 NC_000913.3 positive regulator for rhaBAD operon; transcriptional activator of rhaBAD and rhaT 4098572 rhaS 948397 rhaS Escherichia coli str. K-12 substr. MG1655 transcriptional activator of rhaBAD and rhaT NP_418341.1 4097736 D 511145 CDS NP_418342.2 171701684 948396 4098646..4099494 1 NC_000913.3 positive regulator for rhaRS operon; transcriptional activator of rhaSR 4099494 rhaR 948396 rhaR Escherichia coli str. K-12 substr. MG1655 transcriptional activator of rhaSR NP_418342.2 4098646 D 511145 CDS NP_418343.1 16131747 948398 complement(4099491..4100525) 1 NC_000913.3 rhamnose transport; L-rhamnose:proton symporter 4100525 rhaT 948398 rhaT Escherichia coli str. K-12 substr. MG1655 L-rhamnose:proton symporter NP_418343.1 4099491 R 511145 CDS NP_418344.3 49176442 948403 4100810..4101430 1 NC_000913.3 superoxide dismutase, manganese; superoxide dismutase, Mn 4101430 sodA 948403 sodA Escherichia coli str. K-12 substr. MG1655 superoxide dismutase, Mn NP_418344.3 4100810 D 511145 CDS NP_418345.2 90111665 948407 4101690..4102673 1 NC_000913.3 2-keto-3-deoxy-D-gluconate transport system; 2-keto-3-deoxy-D-gluconate transporter 4102673 kdgT 948407 kdgT Escherichia coli str. K-12 substr. MG1655 2-keto-3-deoxy-D-gluconate transporter NP_418345.2 4101690 D 511145 CDS NP_418346.2 90111666 948406 4102822..4103496 1 NC_000913.3 6-N-hydroxylaminopurine resistance protein 4103496 yiiM 948406 yiiM Escherichia coli str. K-12 substr. MG1655 6-N-hydroxylaminopurine resistance protein NP_418346.2 4102822 D 511145 CDS NP_418347.1 16131751 948405 complement(4103602..4104975) 1 NC_000913.3 probable sensor protein (histidine protein kinase), acting on arcA; sensory histidine kinase in two-component regulatory system with CpxR 4104975 cpxA 948405 cpxA Escherichia coli str. K-12 substr. MG1655 sensory histidine kinase in two-component regulatory system with CpxR NP_418347.1 4103602 R 511145 CDS NP_418348.1 16131752 948404 complement(4104972..4105670) 1 NC_000913.3 transcriptional regulator in 2-component system; response regulator in two-component regulatory system with CpxA 4105670 cpxR 948404 cpxR Escherichia coli str. K-12 substr. MG1655 response regulator in two-component regulatory system with CpxA NP_418348.1 4104972 R 511145 CDS YP_026277.1 49176443 2847688 4105820..4106320 1 NC_000913.3 periplasmic repressor of cpx regulon by interaction with CpxA; inhibitor of the cpx response; periplasmic adaptor protein 4106320 cpxP 2847688 cpxP Escherichia coli str. K-12 substr. MG1655 inhibitor of the cpx response; periplasmic adaptor protein YP_026277.1 4105820 D 511145 CDS NP_418350.1 16131753 948413 4106469..4107371 1 NC_000913.3 putative transport system permease protein; ferrous iron and zinc transporter 4107371 fieF 948413 fieF Escherichia coli str. K-12 substr. MG1655 ferrous iron and zinc transporter NP_418350.1 4106469 D 511145 CDS NP_418351.1 16131754 948412 4107552..4108514 1 NC_000913.3 6-phosphofructokinase I 4108514 pfkA 948412 pfkA Escherichia coli str. K-12 substr. MG1655 6-phosphofructokinase I NP_418351.1 4107552 D 511145 CDS NP_418352.1 16131755 948411 4108834..4109823 1 NC_000913.3 periplasmic sulfate-binding protein; periplasmic-binding component of ABC superfamily; sulfate transporter subunit 4109823 sbp 948411 sbp Escherichia coli str. K-12 substr. MG1655 sulfate transporter subunit NP_418352.1 4108834 D 511145 CDS NP_418353.1 16131756 948410 4109930..4110685 1 NC_000913.3 CDP-diacylglycerol phosphotidylhydrolase 4110685 cdh 948410 cdh Escherichia coli str. K-12 substr. MG1655 CDP-diacylglycerol phosphotidylhydrolase NP_418353.1 4109930 D 511145 CDS NP_418354.1 16131757 948409 complement(4110740..4111507) 1 NC_000913.3 triosephosphate isomerase 4111507 tpiA 948409 tpiA Escherichia coli str. K-12 substr. MG1655 triosephosphate isomerase NP_418354.1 4110740 R 511145 CDS NP_418355.1 16131758 948408 complement(4111615..4112214) 1 NC_000913.3 DUF1454 family putative periplasmic protein 4112214 yiiQ 948408 yiiQ Escherichia coli str. K-12 substr. MG1655 DUF1454 family putative periplasmic protein NP_418355.1 4111615 R 511145 CDS NP_418356.1 16131759 948417 4112315..4112755 1 NC_000913.3 DUF805 family putative inner membrane protein 4112755 yiiR 948417 yiiR Escherichia coli str. K-12 substr. MG1655 DUF805 family putative inner membrane protein NP_418356.1 4112315 D 511145 CDS NP_418357.1 16131760 948416 4112967..4113266 1 NC_000913.3 UPF0381 family protein 4113266 yiiS 948416 yiiS Escherichia coli str. K-12 substr. MG1655 UPF0381 family protein NP_418357.1 4112967 D 511145 CDS NP_418358.1 16131761 948415 4113293..4113721 1 NC_000913.3 putative regulator; stress-induced protein 4113721 uspD 948415 uspD Escherichia coli str. K-12 substr. MG1655 stress-induced protein NP_418358.1 4113293 D 511145 CDS NP_418359.1 16131762 948414 complement(4113726..4114472) 1 NC_000913.3 ferredoxin-NADP reductase 4114472 fpr 948414 fpr Escherichia coli str. K-12 substr. MG1655 ferredoxin-NADP reductase NP_418359.1 4113726 R 511145 CDS NP_418360.1 16131763 948424 complement(4114569..4115579) 1 NC_000913.3 not required for growth on glycerol; fructose 1,6-bisphosphatase II 4115579 glpX 948424 glpX Escherichia coli str. K-12 substr. MG1655 fructose 1,6-bisphosphatase II NP_418360.1 4114569 R 511145 CDS NP_418361.1 16131764 948423 complement(4115714..4117222) 1 NC_000913.3 glycerol kinase 4117222 glpK 948423 glpK Escherichia coli str. K-12 substr. MG1655 glycerol kinase NP_418361.1 4115714 R 511145 CDS NP_418362.1 16131765 948422 complement(4117245..4118090) 1 NC_000913.3 facilitated diffusion of glycerol; glycerol facilitator 4118090 glpF 948422 glpF Escherichia coli str. K-12 substr. MG1655 glycerol facilitator NP_418362.1 4117245 R 511145 CDS NP_418363.1 16131766 948420 4118515..4118760 1 NC_000913.3 FtsZ stabilizer; septal ring assembly factor, stimulates cell division 4118760 zapB 948420 zapB Escherichia coli str. K-12 substr. MG1655 FtsZ stabilizer; septal ring assembly factor, stimulates cell division NP_418363.1 4118515 D 511145 CDS NP_418364.1 16131767 948419 complement(4118845..4119330) 1 NC_000913.3 ribonuclease E (RNase E) inhibitor protein 4119330 rraA 948419 rraA Escherichia coli str. K-12 substr. MG1655 ribonuclease E (RNase E) inhibitor protein NP_418364.1 4118845 R 511145 CDS NP_418365.1 16131768 948418 complement(4119423..4120349) 1 NC_000913.3 1,4-dihydroxy-2-naphthoate --> dimethylmenaquinone; 1,4-dihydroxy-2-naphthoate octaprenyltransferase 4120349 menA 948418 menA Escherichia coli str. K-12 substr. MG1655 1,4-dihydroxy-2-naphthoate octaprenyltransferase NP_418365.1 4119423 R 511145 CDS NP_418366.1 16131769 948430 complement(4120416..4121747) 1 NC_000913.3 heat shock protein hslVU, ATPase subunit, homologous to chaperones; molecular chaperone and ATPase component of HslUV protease 4121747 hslU 948430 hslU Escherichia coli str. K-12 substr. MG1655 molecular chaperone and ATPase component of HslUV protease NP_418366.1 4120416 R 511145 CDS NP_418367.1 16131770 948429 complement(4121757..4122287) 1 NC_000913.3 heat shock protein hslVU, proteasome-related peptidase subunit; peptidase component of the HslUV protease 4122287 hslV 948429 hslV Escherichia coli str. K-12 substr. MG1655 peptidase component of the HslUV protease NP_418367.1 4121757 R 511145 CDS NP_418368.1 16131771 948428 complement(4122380..4123339) 1 NC_000913.3 essential cell division protein 4123339 ftsN 948428 ftsN Escherichia coli str. K-12 substr. MG1655 essential cell division protein NP_418368.1 4122380 R 511145 CDS NP_418369.1 16131772 948427 complement(4123431..4124456) 1 NC_000913.3 regulator for deo operon, udp, cdd, tsx, nupC, and nupG; Anti-activator for CytR-CRP nucleoside utilization regulon 4124456 cytR 948427 cytR Escherichia coli str. K-12 substr. MG1655 Anti-activator for CytR-CRP nucleoside utilization regulon NP_418369.1 4123431 R 511145 CDS NP_418370.1 16131773 948426 complement(4124612..4126810) 1 NC_000913.3 primosomal protein N'(= factor Y)(putative helicase); Primosome factor n' (replication factor Y) 4126810 priA 948426 priA Escherichia coli str. K-12 substr. MG1655 Primosome factor n' (replication factor Y) NP_418370.1 4124612 R 511145 CDS NP_418371.1 16131774 948425 4127013..4127225 1 NC_000913.3 50S ribosomal subunit protein L31 4127225 rpmE 948425 rpmE Escherichia coli str. K-12 substr. MG1655 50S ribosomal subunit protein L31 NP_418371.1 4127013 D 511145 CDS NP_418372.1 16131775 948436 complement(4127286..4127894) 1 NC_000913.3 putative lipid binding hydrolase, DUF830 family protein 4127894 yiiX 948436 yiiX Escherichia coli str. K-12 substr. MG1655 putative lipid binding hydrolase, DUF830 family protein NP_418372.1 4127286 R 511145 CDS NP_418373.1 16131776 948435 complement(4128078..4128395) 1 NC_000913.3 repressor of all met genes but metF; transcriptional repressor, S-adenosylmethionine-binding 4128395 metJ 948435 metJ Escherichia coli str. K-12 substr. MG1655 transcriptional repressor, S-adenosylmethionine-binding NP_418373.1 4128078 R 511145 CDS NP_418374.1 16131777 948434 4128672..4129832 1 NC_000913.3 cystathionine gamma-synthase; cystathionine gamma-synthase, PLP-dependent 4129832 metB 948434 metB Escherichia coli str. K-12 substr. MG1655 cystathionine gamma-synthase, PLP-dependent NP_418374.1 4128672 D 511145 CDS NP_418375.1 16131778 948433 4129835..4132267 1 NC_000913.3 aspartokinase II and homoserine dehydrogenase II; Bifunctional aspartokinase/homoserine dehydrogenase 2 4132267 metL 948433 metL Escherichia coli str. K-12 substr. MG1655 Bifunctional aspartokinase/homoserine dehydrogenase 2 NP_418375.1 4129835 D 511145 CDS NP_418376.1 16131779 948432 4132616..4133506 1 NC_000913.3 5,10-methylenetetrahydrofolate reductase 4133506 metF 948432 metF Escherichia coli str. K-12 substr. MG1655 5,10-methylenetetrahydrofolate reductase NP_418376.1 4132616 D 511145 CDS NP_418377.1 16131780 948431 4133835..4136015 1 NC_000913.3 catalase; hydroperoxidase HPI(I); catalase-peroxidase HPI, heme b-containing 4136015 katG 948431 katG Escherichia coli str. K-12 substr. MG1655 catalase-peroxidase HPI, heme b-containing NP_418377.1 4133835 D 511145 CDS NP_418378.4 90111667 948445 4136108..4137013 1 NC_000913.3 EamA-like transporter family protein 4137013 yijE 948445 yijE Escherichia coli str. K-12 substr. MG1655 EamA-like transporter family protein NP_418378.4 4136108 D 511145 CDS NP_418379.1 16131782 948441 complement(4137040..4137657) 1 NC_000913.3 DUF1287 family protein 4137657 yijF 948441 yijF Escherichia coli str. K-12 substr. MG1655 DUF1287 family protein NP_418379.1 4137040 R 511145 CDS NP_418380.4 90111668 948440 complement(4137932..4139035) 1 NC_000913.3 glycerol dehydrogenase, (NAD); glycerol dehydrogenase, NAD+ dependent; 1,2-propanediol:NAD+ oxidoreductase 4139035 gldA 948440 gldA Escherichia coli str. K-12 substr. MG1655 glycerol dehydrogenase, NAD+ dependent; 1,2-propanediol:NAD+ oxidoreductase NP_418380.4 4137932 R 511145 CDS NP_418381.1 16131784 948439 complement(4139046..4139708) 1 NC_000913.3 fructose-6-phosphate aldolase 2 4139708 fsaB 948439 fsaB Escherichia coli str. K-12 substr. MG1655 fructose-6-phosphate aldolase 2 NP_418381.1 4139046 R 511145 CDS YP_026278.1 49176446 948437 complement(4139720..4142221) 1 NC_000913.3 PEP-protein phosphotransferase system enzyme I; putative PTS enzyme, Hpr component/enzyme I component/enzyme IIA component 4142221 frwA 948437 frwA Escherichia coli str. K-12 substr. MG1655 putative PTS enzyme, Hpr component/enzyme I component/enzyme IIA component YP_026278.1 4139720 R 511145 CDS NP_418384.1 16131787 948448 4142530..4143609 1 NC_000913.3 PTS system, fructose-like enzyme II component; putative enzyme IIC component of PTS 4143609 frwC 948448 frwC Escherichia coli str. K-12 substr. MG1655 putative enzyme IIC component of PTS NP_418384.1 4142530 D 511145 CDS NP_418385.1 16131788 948447 4143624..4143944 1 NC_000913.3 PTS system fructose-like IIB component 1; putative enzyme IIB component of PTS 4143944 frwB 948447 frwB Escherichia coli str. K-12 substr. MG1655 putative enzyme IIB component of PTS NP_418385.1 4143624 D 511145 CDS NP_418386.1 16131789 948454 4143995..4146292 1 NC_000913.3 formate acetyltransferase 2; putative glycine radical domain-containing pyruvate formate-lyase 4146292 pflD 948454 pflD Escherichia coli str. K-12 substr. MG1655 putative glycine radical domain-containing pyruvate formate-lyase NP_418386.1 4143995 D 511145 CDS NP_418387.3 49176447 948453 4146258..4147136 1 NC_000913.3 probable pyruvate formate lyase activating enzyme 2; putative [formate-C-acetyltransferase 2]-activating enzyme; pyruvate formate-lyase 1-activating enzyme 4147136 pflC 948453 pflC Escherichia coli str. K-12 substr. MG1655 putative [formate-C-acetyltransferase 2]-activating enzyme; pyruvate formate-lyase 1-activating enzyme NP_418387.3 4146258 D 511145 CDS NP_418388.1 16131791 948452 4147138..4147479 1 NC_000913.3 PTS system fructose-like IIB component 2; putative enzyme IIB component of PTS 4147479 frwD 948452 frwD Escherichia coli str. K-12 substr. MG1655 putative enzyme IIB component of PTS NP_418388.1 4147138 D 511145 CDS NP_418389.1 16131792 948451 complement(4147466..4148317) 1 NC_000913.3 putative ARAC-type regulatory protein; AraC family putative transcriptional activator 4148317 yijO 948451 yijO Escherichia coli str. K-12 substr. MG1655 AraC family putative transcriptional activator NP_418389.1 4147466 R 511145 CDS NP_418390.1 16131793 948458 complement(4148532..4150265) 1 NC_000913.3 LPS heptose I phosphoethanolamine transferase 4150265 eptC 948458 eptC Escherichia coli str. K-12 substr. MG1655 LPS heptose I phosphoethanolamine transferase NP_418390.1 4148532 R 511145 CDS NP_418391.1 16131794 948457 complement(4150447..4153098) 1 NC_000913.3 phosphoenolpyruvate carboxylase 4153098 ppc 948457 ppc Escherichia coli str. K-12 substr. MG1655 phosphoenolpyruvate carboxylase NP_418391.1 4150447 R 511145 CDS NP_418392.1 16131795 948456 complement(4153696..4154847) 1 NC_000913.3 acetylornithine deacetylase 4154847 argE 948456 argE Escherichia coli str. K-12 substr. MG1655 acetylornithine deacetylase NP_418392.1 4153696 R 511145 CDS NP_418393.1 16131796 948455 4155001..4156005 1 NC_000913.3 N-acetyl-gamma-glutamylphosphate reductase; N-acetyl-gamma-glutamylphosphate reductase, NAD(P)-binding 4156005 argC 948455 argC Escherichia coli str. K-12 substr. MG1655 N-acetyl-gamma-glutamylphosphate reductase, NAD(P)-binding NP_418393.1 4155001 D 511145 CDS NP_418394.3 145698337 948464 4156013..4156789 1 NC_000913.3 acetylglutamate kinase 4156789 argB 948464 argB Escherichia coli str. K-12 substr. MG1655 acetylglutamate kinase NP_418394.3 4156013 D 511145 CDS NP_418395.1 16131798 948463 4156850..4158223 1 NC_000913.3 argininosuccinate lyase 4158223 argH 948463 argH Escherichia coli str. K-12 substr. MG1655 argininosuccinate lyase NP_418395.1 4156850 D 511145 CDS NP_418396.1 16131799 948462 4158490..4159407 1 NC_000913.3 activator, hydrogen peroxide-inducible genes; oxidative and nitrosative stress transcriptional regulator 4159407 oxyR 948462 oxyR Escherichia coli str. K-12 substr. MG1655 oxidative and nitrosative stress transcriptional regulator NP_418396.1 4158490 D 511145 CDS NP_418397.2 90111670 948461 complement(4159390..4160790) 1 NC_000913.3 pyridine nucleotide transhydrogenase, soluble 4160790 sthA 948461 sthA Escherichia coli str. K-12 substr. MG1655 pyridine nucleotide transhydrogenase, soluble NP_418397.2 4159390 R 511145 CDS NP_418398.2 145698338 948460 4161124..4161771 1 NC_000913.3 transcriptional repressor of fabA and fabB 4161771 fabR 948460 fabR Escherichia coli str. K-12 substr. MG1655 transcriptional repressor of fabA and fabB NP_418398.2 4161124 D 511145 CDS NP_418399.1 16131802 948459 4161771..4162130 1 NC_000913.3 DUF1422 family inner membrane protein 4162130 yijD 948459 yijD Escherichia coli str. K-12 substr. MG1655 DUF1422 family inner membrane protein NP_418399.1 4161771 D 511145 CDS NP_418400.1 16131803 947143 complement(4162170..4163270) 1 NC_000913.3 tRNA m(5)U54 methyltransferase, SAM-dependent; tmRNA m(5)U341 methyltransferase 4163270 trmA 947143 trmA Escherichia coli str. K-12 substr. MG1655 tRNA m(5)U54 methyltransferase, SAM-dependent; tmRNA m(5)U341 methyltransferase NP_418400.1 4162170 R 511145 CDS NP_418401.1 16131804 948468 4163639..4165483 1 NC_000913.3 outer membrane receptor for transport of vitamin B12, E colicins, and bacteriophage BF23; vitamin B12/cobalamin outer membrane transporter 4165483 btuB 948468 btuB Escherichia coli str. K-12 substr. MG1655 vitamin B12/cobalamin outer membrane transporter NP_418401.1 4163639 D 511145 CDS NP_418402.2 90111671 948467 4165428..4166285 1 NC_000913.3 glutamate racemase, required for biosynthesis of D-glutamate and peptidoglycan; glutamate racemase 4166285 murI 948467 murI Escherichia coli str. K-12 substr. MG1655 glutamate racemase NP_418402.2 4165428 D 511145 CDS NP_418403.1 16131806 948470 4172057..4173085 1 NC_000913.3 UDP-N-acetylenolpyruvoylglucosamine reductase; UDP-N-acetylenolpyruvoylglucosamine reductase, FAD-binding 4173085 murB 948470 murB Escherichia coli str. K-12 substr. MG1655 UDP-N-acetylenolpyruvoylglucosamine reductase, FAD-binding NP_418403.1 4172057 D 511145 CDS NP_418404.1 16131807 948469 4173082..4174047 1 NC_000913.3 biotin-[acetylCoA carboxylase] holoenzyme synthetase and biotin operon repressor; bifunctional biotin-[acetylCoA carboxylase] holoenzyme synthetase/ DNA-binding transcriptional repressor, bio-5'-AMP-binding 4174047 birA 948469 birA Escherichia coli str. K-12 substr. MG1655 bifunctional biotin-[acetylCoA carboxylase] holoenzyme synthetase/ DNA-binding transcriptional repressor, bio-5'-AMP-binding NP_418404.1 4173082 D 511145 CDS NP_418405.1 16131808 948479 complement(4174076..4175026) 1 NC_000913.3 pantothenate kinase 4175026 coaA 948479 coaA Escherichia coli str. K-12 substr. MG1655 pantothenate kinase NP_418405.1 4174076 R 511145 CDS NP_418407.1 16131810 948482 4175944..4177128 1 NC_000913.3 translation elongation factor EF-Tu 2 4177128 tufB 948482 tufB Escherichia coli str. K-12 substr. MG1655 translation elongation factor EF-Tu 2 NP_418407.1 4175944 D 511145 CDS NP_418408.1 16131811 948486 4177358..4177741 1 NC_000913.3 preprotein translocase; preprotein translocase membrane subunit 4177741 secE 948486 secE Escherichia coli str. K-12 substr. MG1655 preprotein translocase membrane subunit NP_418408.1 4177358 D 511145 CDS NP_418409.1 16131812 948485 4177743..4178288 1 NC_000913.3 component in transcription antitermination; transcription termination factor 4178288 nusG 948485 nusG Escherichia coli str. K-12 substr. MG1655 transcription termination factor NP_418409.1 4177743 D 511145 CDS NP_418410.1 16131813 948484 4178447..4178875 1 NC_000913.3 50S ribosomal subunit protein L11 4178875 rplK 948484 rplK Escherichia coli str. K-12 substr. MG1655 50S ribosomal subunit protein L11 NP_418410.1 4178447 D 511145 CDS NP_418411.1 16131814 948483 4178879..4179583 1 NC_000913.3 50S ribosomal subunit protein L1, regulates synthesis of L1 and L11; 50S ribosomal subunit protein L1 4179583 rplA 948483 rplA Escherichia coli str. K-12 substr. MG1655 50S ribosomal subunit protein L1 NP_418411.1 4178879 D 511145 CDS NP_418412.1 16131815 948490 4179996..4180493 1 NC_000913.3 50S ribosomal subunit protein L10 4180493 rplJ 948490 rplJ Escherichia coli str. K-12 substr. MG1655 50S ribosomal subunit protein L10 NP_418412.1 4179996 D 511145 CDS NP_418413.1 16131816 948489 4180560..4180925 1 NC_000913.3 50S ribosomal subunit protein L7/L12 4180925 rplL 948489 rplL Escherichia coli str. K-12 substr. MG1655 50S ribosomal subunit protein L7/L12 NP_418413.1 4180560 D 511145 CDS NP_418414.1 16131817 948488 4181245..4185273 1 NC_000913.3 RNA polymerase, beta subunit 4185273 rpoB 948488 rpoB Escherichia coli str. K-12 substr. MG1655 RNA polymerase, beta subunit NP_418414.1 4181245 D 511145 CDS NP_418415.1 16131818 948487 4185350..4189573 1 NC_000913.3 RNA polymerase, beta prime subunit 4189573 rpoC 948487 rpoC Escherichia coli str. K-12 substr. MG1655 RNA polymerase, beta prime subunit NP_418415.1 4185350 D 511145 CDS NP_418416.1 16131819 948495 4189786..4190325 1 NC_000913.3 heat shock protein htrC; stationary phase growth adaptation protein 4190325 yjaZ 948495 yjaZ Escherichia coli str. K-12 substr. MG1655 stationary phase growth adaptation protein NP_418416.1 4189786 D 511145 CDS NP_418417.1 16131820 948494 complement(4190735..4191868) 1 NC_000913.3 tyrosine lyase, involved in thiamine-thiazole moiety synthesis 4191868 thiH 948494 thiH Escherichia coli str. K-12 substr. MG1655 tyrosine lyase, involved in thiamine-thiazole moiety synthesis NP_418417.1 4190735 R 511145 CDS NP_418418.2 33347812 948493 complement(4191865..4192635) 1 NC_000913.3 thiamin (thiazole moiety) biosynthesis protein; thiamine biosynthesis ThiGH complex subunit 4192635 thiG 948493 thiG Escherichia coli str. K-12 substr. MG1655 thiamine biosynthesis ThiGH complex subunit NP_418418.2 4191865 R 511145 CDS YP_026279.1 49176448 2847702 complement(4192637..4192837) 1 NC_000913.3 sulfur carrier protein; immediate sulfur donor in thiazole formation 4192837 thiS 2847702 thiS Escherichia coli str. K-12 substr. MG1655 immediate sulfur donor in thiazole formation YP_026279.1 4192637 R 511145 CDS NP_418420.4 90111672 948500 complement(4192821..4193576) 1 NC_000913.3 adenylyltransferase; adenylyltransferase, modifies ThiS C-terminus 4193576 thiF 948500 thiF Escherichia coli str. K-12 substr. MG1655 adenylyltransferase, modifies ThiS C-terminus NP_418420.4 4192821 R 511145 CDS NP_418421.1 16131823 948491 complement(4193569..4194204) 1 NC_000913.3 thiamin-phosphate synthase (thiamine-phosphate pyrophosphorylase); thiamine phosphate synthase (thiamine phosphate pyrophosphorylase) 4194204 thiE 948491 thiE Escherichia coli str. K-12 substr. MG1655 thiamine phosphate synthase (thiamine phosphate pyrophosphorylase) NP_418421.1 4193569 R 511145 CDS NP_418422.1 16131824 948492 complement(4194204..4196099) 1 NC_000913.3 phosphomethylpyrimidine synthase 4196099 thiC 948492 thiC Escherichia coli str. K-12 substr. MG1655 phosphomethylpyrimidine synthase NP_418422.1 4194204 R 511145 CDS NP_418423.1 16131825 948496 complement(4196332..4196808) 1 NC_000913.3 stationary phase protein, binds sigma 70 RNA polymerase subunit 4196808 rsd 948496 rsd Escherichia coli str. K-12 substr. MG1655 stationary phase protein, binds sigma 70 RNA polymerase subunit NP_418423.1 4196332 R 511145 CDS YP_026280.1 49176450 948498 4196903..4197676 1 NC_000913.3 NADH pyrophosphatase 4197676 nudC 948498 nudC Escherichia coli str. K-12 substr. MG1655 NADH pyrophosphatase YP_026280.1 4196903 D 511145 CDS NP_418425.1 16131827 948497 4197716..4198780 1 NC_000913.3 uroporphyrinogen decarboxylase 4198780 hemE 948497 hemE Escherichia coli str. K-12 substr. MG1655 uroporphyrinogen decarboxylase NP_418425.1 4197716 D 511145 CDS NP_418426.2 90111673 948502 4198790..4199461 1 NC_000913.3 endonuclease V (deoxyinosine 3'endoduclease); endonuclease V; deoxyinosine 3' endonuclease 4199461 nfi 948502 nfi Escherichia coli str. K-12 substr. MG1655 endonuclease V; deoxyinosine 3' endonuclease NP_418426.2 4198790 D 511145 CDS NP_418427.1 16131829 948501 4199504..4200094 1 NC_000913.3 DUF416 domain protein 4200094 yjaG 948501 yjaG Escherichia coli str. K-12 substr. MG1655 DUF416 domain protein NP_418427.1 4199504 D 511145 CDS NP_418428.1 16131830 948499 4200281..4200553 1 NC_000913.3 DNA-binding protein HU-alpha (HU-2); HU, DNA-binding transcriptional regulator, alpha subunit 4200553 hupA 948499 hupA Escherichia coli str. K-12 substr. MG1655 HU, DNA-binding transcriptional regulator, alpha subunit NP_418428.1 4200281 D 511145 CDS NP_418429.1 16131831 948508 4200566..4201261 1 NC_000913.3 DUF1481 family putative lipoprotein 4201261 yjaH 948508 yjaH Escherichia coli str. K-12 substr. MG1655 DUF1481 family putative lipoprotein NP_418429.1 4200566 D 511145 CDS NP_418430.2 90111674 948507 complement(4201263..4201688) 1 NC_000913.3 Zn-dependent periplasmic chaperone 4201688 zraP 948507 zraP Escherichia coli str. K-12 substr. MG1655 Zn-dependent periplasmic chaperone NP_418430.2 4201263 R 511145 CDS NP_418431.1 16131833 948506 4201926..4203323 1 NC_000913.3 sensory histidine kinase in two-component regulatory system with ZraR 4203323 zraS 948506 zraS Escherichia coli str. K-12 substr. MG1655 sensory histidine kinase in two-component regulatory system with ZraR NP_418431.1 4201926 D 511145 CDS NP_418432.1 16131834 948505 4203320..4204645 1 NC_000913.3 fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein 4204645 zraR 948505 zraR Escherichia coli str. K-12 substr. MG1655 fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein NP_418432.1 4203320 D 511145 CDS NP_418433.1 16131835 948504 complement(4204642..4205931) 1 NC_000913.3 phosphoribosylglycinamide synthetase = GAR synthetase; phosphoribosylglycinamide synthetase phosphoribosylamine-glycine ligase 4205931 purD 948504 purD Escherichia coli str. K-12 substr. MG1655 phosphoribosylglycinamide synthetase phosphoribosylamine-glycine ligase NP_418433.1 4204642 R 511145 CDS NP_418434.1 16131836 948503 complement(4205943..4207532) 1 NC_000913.3 fused IMP cyclohydrolase/phosphoribosylaminoimidazolecarboxamide formyltransferase 4207532 purH 948503 purH Escherichia coli str. K-12 substr. MG1655 fused IMP cyclohydrolase/phosphoribosylaminoimidazolecarboxamide formyltransferase NP_418434.1 4205943 R 511145 CDS NP_418435.1 16131837 948515 4213234..4213617 1 NC_000913.3 stress-induced protein 4213617 yjaA 948515 yjaA Escherichia coli str. K-12 substr. MG1655 stress-induced protein NP_418435.1 4213234 D 511145 CDS NP_418436.1 16131838 948514 complement(4213680..4214123) 1 NC_000913.3 putative acetyltransferase 4214123 yjaB 948514 yjaB Escherichia coli str. K-12 substr. MG1655 putative acetyltransferase NP_418436.1 4213680 R 511145 CDS NP_418437.1 16131839 948513 4214280..4215209 1 NC_000913.3 homoserine O-transsuccinylase 4215209 metA 948513 metA Escherichia coli str. K-12 substr. MG1655 homoserine O-transsuccinylase NP_418437.1 4214280 D 511145 CDS NP_418438.1 16131840 948512 4215478..4217079 1 NC_000913.3 malate synthase A 4217079 aceB 948512 aceB Escherichia coli str. K-12 substr. MG1655 malate synthase A NP_418438.1 4215478 D 511145 CDS NP_418439.1 16131841 948517 4217109..4218413 1 NC_000913.3 isocitrate lyase 4218413 aceA 948517 aceA Escherichia coli str. K-12 substr. MG1655 isocitrate lyase NP_418439.1 4217109 D 511145 CDS NP_418440.1 16131842 944797 4218596..4220332 1 NC_000913.3 isocitrate dehydrogenase kinase/phosphatase 4220332 aceK 944797 aceK Escherichia coli str. K-12 substr. MG1655 isocitrate dehydrogenase kinase/phosphatase NP_418440.1 4218596 D 511145 CDS NP_418441.1 16131843 944933 complement(4220301..4222487) 1 NC_000913.3 ankyrin repeat protein 4222487 arpA 944933 arpA Escherichia coli str. K-12 substr. MG1655 ankyrin repeat protein NP_418441.1 4220301 R 511145 CDS NP_418442.2 90111675 948524 complement(4222804..4223628) 1 NC_000913.3 repressor of aceBA operon; transcriptional repressor 4223628 iclR 948524 iclR Escherichia coli str. K-12 substr. MG1655 transcriptional repressor NP_418442.2 4222804 R 511145 CDS NP_418443.1 16131845 948522 4223828..4227511 1 NC_000913.3 B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase, repressor of metE and metF; homocysteine-N5-methyltetrahydrofolate transmethylase, B12-dependent 4227511 metH 948522 metH Escherichia coli str. K-12 substr. MG1655 homocysteine-N5-methyltetrahydrofolate transmethylase, B12-dependent NP_418443.1 4223828 D 511145 CDS NP_418444.1 16131846 948521 4227731..4229362 1 NC_000913.3 putative alpha helix protein; putative Na+/Pi-cotransporter 4229362 yjbB 948521 yjbB Escherichia coli str. K-12 substr. MG1655 putative Na+/Pi-cotransporter NP_418444.1 4227731 D 511145 CDS NP_418445.1 16131847 948520 complement(4229453..4230142) 1 NC_000913.3 peptidase E, a dipeptidase where amino-terminal residue is aspartate; (alpha)-aspartyl dipeptidase 4230142 pepE 948520 pepE Escherichia coli str. K-12 substr. MG1655 (alpha)-aspartyl dipeptidase NP_418445.1 4229453 R 511145 CDS NP_418446.1 16131848 948519 4230354..4231226 1 NC_000913.3 23S rRNA pseudouridine(2604) synthase 4231226 rluF 948519 rluF Escherichia coli str. K-12 substr. MG1655 23S rRNA pseudouridine(2604) synthase NP_418446.1 4230354 D 511145 CDS NP_418447.1 16131849 948518 complement(4231359..4231631) 1 NC_000913.3 DUF3811 family protein 4231631 yjbD 948518 yjbD Escherichia coli str. K-12 substr. MG1655 DUF3811 family protein NP_418447.1 4231359 R 511145 CDS NP_418448.1 16131850 948531 complement(4231884..4233233) 1 NC_000913.3 aspartokinase III, lysine sensitive; lysine-sensitive aspartokinase 3 4233233 lysC 948531 lysC Escherichia coli str. K-12 substr. MG1655 lysine-sensitive aspartokinase 3 NP_418448.1 4231884 R 511145 CDS NP_418449.1 16131851 948535 4233758..4235407 1 NC_000913.3 glucosephosphate isomerase 4235407 pgi 948535 pgi Escherichia coli str. K-12 substr. MG1655 glucosephosphate isomerase NP_418449.1 4233758 D 511145 CDS NP_418450.1 16131852 948534 4235906..4236148 1 NC_000913.3 extracellular polysaccharide production threonine-rich protein 4236148 yjbE 948534 yjbE Escherichia coli str. K-12 substr. MG1655 extracellular polysaccharide production threonine-rich protein NP_418450.1 4235906 D 511145 CDS NP_418451.4 90111676 948533 4236262..4236900 1 NC_000913.3 extracellular polysaccharide production lipoprotein 4236900 yjbF 948533 yjbF Escherichia coli str. K-12 substr. MG1655 extracellular polysaccharide production lipoprotein NP_418451.4 4236262 D 511145 CDS NP_418452.1 16131854 948526 4236897..4237634 1 NC_000913.3 extracellular polysaccharide export OMA protein 4237634 yjbG 948526 yjbG Escherichia coli str. K-12 substr. MG1655 extracellular polysaccharide export OMA protein NP_418452.1 4236897 D 511145 CDS NP_418453.1 16131855 948527 4237634..4239730 1 NC_000913.3 DUF940 family extracellular polysaccharide protein 4239730 yjbH 948527 yjbH Escherichia coli str. K-12 substr. MG1655 DUF940 family extracellular polysaccharide protein NP_418453.1 4237634 D 511145 CDS YP_001165332.1 145698339 5061528 complement(4239777..4240055) 1 NC_000913.3 putative periplasmic protein 4240055 yjbT 5061528 yjbT Escherichia coli str. K-12 substr. MG1655 putative periplasmic protein YP_001165332.1 4239777 R 511145 CDS NP_418454.1 16131856 948528 4240325..4240735 1 NC_000913.3 phosphate starvation inducible protein 4240735 psiE 948528 psiE Escherichia coli str. K-12 substr. MG1655 phosphate starvation inducible protein NP_418454.1 4240325 D 511145 CDS NP_418455.1 16131857 948529 complement(4240779..4242254) 1 NC_000913.3 xylose-proton symport; D-xylose transporter 4242254 xylE 948529 xylE Escherichia coli str. K-12 substr. MG1655 D-xylose transporter NP_418455.1 4240779 R 511145 CDS NP_418456.1 16131858 948530 complement(4242626..4243516) 1 NC_000913.3 part of maltose permease, inner membrane; membrane component of ABC superfamily; maltose transporter subunit 4243516 malG 948530 malG Escherichia coli str. K-12 substr. MG1655 maltose transporter subunit NP_418456.1 4242626 R 511145 CDS NP_418457.1 16131859 948532 complement(4243531..4245075) 1 NC_000913.3 part of maltose permease, periplasmic; membrane component of ABC superfamily; maltose transporter subunit 4245075 malF 948532 malF Escherichia coli str. K-12 substr. MG1655 maltose transporter subunit NP_418457.1 4243531 R 511145 CDS NP_418458.1 16131860 948538 complement(4245229..4246419) 1 NC_000913.3 periplasmic maltose-binding protein; substrate recognition for transport and chemotaxis; periplasmic-binding component of ABC superfamily; maltose transporter subunit 4246419 malE 948538 malE Escherichia coli str. K-12 substr. MG1655 maltose transporter subunit NP_418458.1 4245229 R 511145 CDS NP_418459.1 16131861 948537 4246784..4247899 1 NC_000913.3 ATP-binding component of transport system for maltose; fused maltose transport subunit, ATP-binding component of ABC superfamily/regulatory protein 4247899 malK 948537 malK Escherichia coli str. K-12 substr. MG1655 fused maltose transport subunit, ATP-binding component of ABC superfamily/regulatory protein NP_418459.1 4246784 D 511145 CDS NP_418460.1 16131862 948548 4247971..4249311 1 NC_000913.3 phage lambda receptor protein; maltose high-affinity receptor; maltose outer membrane porin (maltoporin) 4249311 lamB 948548 lamB Escherichia coli str. K-12 substr. MG1655 maltose outer membrane porin (maltoporin) NP_418460.1 4247971 D 511145 CDS NP_418461.1 16131863 948547 4249554..4250474 1 NC_000913.3 periplasmic protein of mal regulon; maltose regulon periplasmic protein 4250474 malM 948547 malM Escherichia coli str. K-12 substr. MG1655 maltose regulon periplasmic protein NP_418461.1 4249554 D 511145 CDS b4038 948546 join(4250703..4250885,4250885..4250959,4250961..4252283) 1 NC_000913.3 pseudogene, SopA-related, pentapeptide repeats-containing; <NULL_VALUE> 4252283 yjbI 948546 yjbI Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 4250703 D 511145 CDS NP_418463.4 90111677 948545 4252506..4253003 1 NC_000913.3 chorismate lyase; chorismate--pyruvate lyase 4253003 ubiC 948545 ubiC Escherichia coli str. K-12 substr. MG1655 chorismate--pyruvate lyase NP_418463.4 4252506 D 511145 CDS NP_418464.1 16131866 948540 4253016..4253888 1 NC_000913.3 4-hydroxybenzoate-octaprenyltransferase; p-hydroxybenzoate octaprenyltransferase 4253888 ubiA 948540 ubiA Escherichia coli str. K-12 substr. MG1655 p-hydroxybenzoate octaprenyltransferase NP_418464.1 4253016 D 511145 CDS NP_418465.4 90111678 948541 complement(4254043..4256466) 1 NC_000913.3 glycerol-3-phosphate acyltransferase; glycerol-3-phosphate O-acyltransferase 4256466 plsB 948541 plsB Escherichia coli str. K-12 substr. MG1655 glycerol-3-phosphate O-acyltransferase NP_418465.4 4254043 R 511145 CDS NP_418466.1 16131868 948543 4256637..4257005 1 NC_000913.3 diacylglycerol kinase 4257005 dgkA 948543 dgkA Escherichia coli str. K-12 substr. MG1655 diacylglycerol kinase NP_418466.1 4256637 D 511145 CDS NP_418467.1 16131869 948544 4257115..4257723 1 NC_000913.3 regulator for SOS(lexA) regulon; transcriptional repressor of SOS regulon 4257723 lexA 948544 lexA Escherichia coli str. K-12 substr. MG1655 transcriptional repressor of SOS regulon NP_418467.1 4257115 D 511145 CDS NP_418468.3 162135919 948554 4257742..4259121 1 NC_000913.3 DNA-damage-inducible protein F; oxidative stress resistance protein; putative MATE family efflux pump; UV and mitomycin C inducible protein 4259121 dinF 948554 dinF Escherichia coli str. K-12 substr. MG1655 oxidative stress resistance protein; putative MATE family efflux pump; UV and mitomycin C inducible protein NP_418468.3 4257742 D 511145 CDS NP_418469.1 16131871 948553 4259237..4259446 1 NC_000913.3 stress-induced protein, UPF0337 family 4259446 yjbJ 948553 yjbJ Escherichia coli str. K-12 substr. MG1655 stress-induced protein, UPF0337 family NP_418469.1 4259237 D 511145 CDS NP_418470.4 90111679 948552 complement(4259488..4260003) 1 NC_000913.3 transcriptional repressor, Zn(II)-binding 4260003 zur 948552 zur Escherichia coli str. K-12 substr. MG1655 transcriptional repressor, Zn(II)-binding NP_418470.4 4259488 R 511145 CDS NP_418471.1 16131873 948551 4260321..4260575 1 NC_000913.3 uncharacterized protein 4260575 yjbL 948551 yjbL Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_418471.1 4260321 D 511145 CDS NP_418472.1 16131874 948550 4260599..4261306 1 NC_000913.3 uncharacterized protein 4261306 yjbM 948550 yjbM Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_418472.1 4260599 D 511145 CDS NP_418473.3 635341467 948558 4261669..4262706 1 NC_000913.3 tRNA-dihydrouridine synthase A 4262706 dusA 948558 dusA Escherichia coli str. K-12 substr. MG1655 tRNA-dihydrouridine synthase A NP_418473.3 4261669 D 511145 CDS NP_418474.4 90111680 948557 4262840..4263082 1 NC_000913.3 phage shock protein G 4263082 pspG 948557 pspG Escherichia coli str. K-12 substr. MG1655 phage shock protein G NP_418474.4 4262840 D 511145 CDS NP_418475.1 16131877 948556 complement(4263248..4264231) 1 NC_000913.3 quinone oxidoreductase; quinone oxidoreductase, NADPH-dependent 4264231 qorA 948556 qorA Escherichia coli str. K-12 substr. MG1655 quinone oxidoreductase, NADPH-dependent NP_418475.1 4263248 R 511145 CDS NP_418476.1 16131878 948555 4264314..4265729 1 NC_000913.3 replicative DNA helicase; part of primosome; replicative DNA helicase 4265729 dnaB 948555 dnaB Escherichia coli str. K-12 substr. MG1655 replicative DNA helicase NP_418476.1 4264314 D 511145 CDS NP_418477.1 16131879 948564 4265782..4266861 1 NC_000913.3 alanine racemase 1; alanine racemase, biosynthetic, PLP-binding 4266861 alr 948564 alr Escherichia coli str. K-12 substr. MG1655 alanine racemase, biosynthetic, PLP-binding NP_418477.1 4265782 D 511145 CDS NP_418478.1 16131880 948563 4267114..4268307 1 NC_000913.3 tyrosine aminotransferase, tyrosine repressible; tyrosine aminotransferase, tyrosine-repressible, PLP-dependent 4268307 tyrB 948563 tyrB Escherichia coli str. K-12 substr. MG1655 tyrosine aminotransferase, tyrosine-repressible, PLP-dependent NP_418478.1 4267114 D 511145 CDS YP_001165333.1 145698341 5061529 complement(4268809..4269012) 1 NC_000913.3 uncharacterized protein 4269012 yjbS 5061529 yjbS Escherichia coli str. K-12 substr. MG1655 uncharacterized protein YP_001165333.1 4268809 R 511145 CDS NP_418479.1 16131881 948562 4269414..4270127 1 NC_000913.3 diadenosine tetraphosphatase; acid phosphatase/phosphotransferase, class B, non-specific 4270127 aphA 948562 aphA Escherichia coli str. K-12 substr. MG1655 acid phosphatase/phosphotransferase, class B, non-specific NP_418479.1 4269414 D 511145 CDS NP_418480.1 16131882 948561 4270238..4270654 1 NC_000913.3 thiamine phosphate synthase 4270654 yjbQ 948561 yjbQ Escherichia coli str. K-12 substr. MG1655 thiamine phosphate synthase NP_418480.1 4270238 D 511145 CDS NP_418481.1 16131883 948560 4270658..4271014 1 NC_000913.3 DUF419 family protein 4271014 yjbR 948560 yjbR Escherichia coli str. K-12 substr. MG1655 DUF419 family protein NP_418481.1 4270658 D 511145 CDS NP_418482.1 16131884 948559 complement(4271049..4273871) 1 NC_000913.3 excision nuclease subunit A; ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC 4273871 uvrA 948559 uvrA Escherichia coli str. K-12 substr. MG1655 ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC NP_418482.1 4271049 R 511145 CDS NP_418483.1 16131885 948570 4274125..4274661 1 NC_000913.3 ssDNA-binding protein; single-stranded DNA-binding protein 4274661 ssb 948570 ssb Escherichia coli str. K-12 substr. MG1655 single-stranded DNA-binding protein NP_418483.1 4274125 D 511145 CDS NP_418484.4 90111681 948569 complement(4274760..4275041) 1 NC_000913.3 putative inner membrane protein 4275041 yjcB 948569 yjcB Escherichia coli str. K-12 substr. MG1655 putative inner membrane protein NP_418484.4 4274760 R 511145 CDS NP_418485.1 16131887 948568 4275471..4277057 1 NC_000913.3 putative membrane-anchored cyclic-di-GMP phosphodiesterase 4277057 yjcC 948568 yjcC Escherichia coli str. K-12 substr. MG1655 putative membrane-anchored cyclic-di-GMP phosphodiesterase NP_418485.1 4275471 D 511145 CDS NP_418486.1 16131888 948567 complement(4277060..4277383) 1 NC_000913.3 regulation of superoxide response regulon; superoxide response regulon transcriptional activator; autoregulator 4277383 soxS 948567 soxS Escherichia coli str. K-12 substr. MG1655 superoxide response regulon transcriptional activator; autoregulator NP_418486.1 4277060 R 511145 CDS NP_418487.1 16131889 948566 4277469..4277933 1 NC_000913.3 redox-sensing activator of soxS; redox-sensitive transcriptional activator of soxS; autorepressor 4277933 soxR 948566 soxR Escherichia coli str. K-12 substr. MG1655 redox-sensitive transcriptional activator of soxS; autorepressor NP_418487.1 4277469 D 511145 CDS NP_418488.1 16131890 948565 4278479..4279828 1 NC_000913.3 inner membrane putative guanine permease 4279828 yjcD 948565 yjcD Escherichia coli str. K-12 substr. MG1655 inner membrane putative guanine permease NP_418488.1 4278479 D 511145 CDS NP_418489.1 16131891 948577 4279980..4281629 1 NC_000913.3 putative cation/proton antiporter 4281629 yjcE 948577 yjcE Escherichia coli str. K-12 substr. MG1655 putative cation/proton antiporter NP_418489.1 4279980 D 511145 CDS NP_418490.1 16131892 948576 complement(4281783..4283075) 1 NC_000913.3 pentapeptide repeats protein 4283075 yjcF 948576 yjcF Escherichia coli str. K-12 substr. MG1655 pentapeptide repeats protein NP_418490.1 4281783 R 511145 CDS NP_418491.1 16131893 948575 complement(4283253..4284902) 1 NC_000913.3 acetate permease; also transports glycolate with a rate high enough to support growth on this carbon source; acetate transporter 4284902 actP 948575 actP Escherichia coli str. K-12 substr. MG1655 acetate transporter NP_418491.1 4283253 R 511145 CDS NP_418492.1 16131894 948574 complement(4284899..4285213) 1 NC_000913.3 DUF485 family inner membrane protein 4285213 yjcH 948574 yjcH Escherichia coli str. K-12 substr. MG1655 DUF485 family inner membrane protein NP_418492.1 4284899 R 511145 CDS NP_418493.1 16131895 948572 complement(4285413..4287371) 1 NC_000913.3 acetyl-CoA synthetase 4287371 acs 948572 acs Escherichia coli str. K-12 substr. MG1655 acetyl-CoA synthetase NP_418493.1 4285413 R 511145 CDS NP_418494.1 16131896 948571 4287764..4289200 1 NC_000913.3 periplasmic cytochrome c(552): plays a role in nitrite reduction; nitrite reductase, formate-dependent, cytochrome 4289200 nrfA 948571 nrfA Escherichia coli str. K-12 substr. MG1655 nitrite reductase, formate-dependent, cytochrome NP_418494.1 4287764 D 511145 CDS NP_418495.2 90111682 948573 4289245..4289811 1 NC_000913.3 formate-dependent nitrite reductase; a penta-haeme cytochrome c; nitrite reductase, formate-dependent, penta-heme cytochrome c 4289811 nrfB 948573 nrfB Escherichia coli str. K-12 substr. MG1655 nitrite reductase, formate-dependent, penta-heme cytochrome c NP_418495.2 4289245 D 511145 CDS NP_418496.1 16131898 948581 4289808..4290479 1 NC_000913.3 formate-dependent nitrite reductase; Fe-S centers; formate-dependent nitrite reductase, 4Fe4S subunit 4290479 nrfC 948581 nrfC Escherichia coli str. K-12 substr. MG1655 formate-dependent nitrite reductase, 4Fe4S subunit NP_418496.1 4289808 D 511145 CDS NP_418497.1 16131899 948580 4290476..4291432 1 NC_000913.3 formate-dependent nitrate reductase complex; transmembrane protein; formate-dependent nitrite reductase, membrane subunit 4291432 nrfD 948580 nrfD Escherichia coli str. K-12 substr. MG1655 formate-dependent nitrite reductase, membrane subunit NP_418497.1 4290476 D 511145 CDS NP_418498.1 16131900 948579 4291512..4293170 1 NC_000913.3 formate-dependent nitrite reductase; possible assembly function; heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfE 4293170 nrfE 948579 nrfE Escherichia coli str. K-12 substr. MG1655 heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfE NP_418498.1 4291512 D 511145 CDS NP_418499.1 16131901 948578 4293163..4293546 1 NC_000913.3 part of formate-dependent nitrite reductase complex; heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfF 4293546 nrfF 948578 nrfF Escherichia coli str. K-12 substr. MG1655 heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfF NP_418499.1 4293163 D 511145 CDS NP_418500.1 16131902 948592 4293543..4294139 1 NC_000913.3 part of formate-dependent nitrite reductase complex; heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfG 4294139 nrfG 948592 nrfG Escherichia coli str. K-12 substr. MG1655 heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfG NP_418500.1 4293543 D 511145 CDS NP_418501.1 16131903 948591 4294481..4295794 1 NC_000913.3 glutamate-aspartate symport protein; glutamate/aspartate:proton symporter 4295794 gltP 948591 gltP Escherichia coli str. K-12 substr. MG1655 glutamate/aspartate:proton symporter NP_418501.1 4294481 D 511145 CDS NP_418502.1 16131904 948586 complement(4296436..4297125) 1 NC_000913.3 Sel1 family TPR-like repeat protein 4297125 yjcO 948586 yjcO Escherichia coli str. K-12 substr. MG1655 Sel1 family TPR-like repeat protein NP_418502.1 4296436 R 511145 CDS NP_418503.1 16131905 948584 complement(4297219..4299366) 1 NC_000913.3 selenopolypeptide subunit of formate dehydrogenase H; formate dehydrogenase-H, selenopolypeptide subunit 4299366 fdhF 948584 fdhF Escherichia coli str. K-12 substr. MG1655 formate dehydrogenase-H, selenopolypeptide subunit NP_418503.1 4297219 R 511145 CDS NP_418504.1 16131906 948583 complement(4299564..4301030) 1 NC_000913.3 putative enzyme; outer membrane factor of efflux pump 4301030 mdtP 948583 mdtP Escherichia coli str. K-12 substr. MG1655 outer membrane factor of efflux pump NP_418504.1 4299564 R 511145 CDS NP_418505.2 90111683 948582 complement(4301027..4303078) 1 NC_000913.3 putative enzyme; membrane translocase (MDR) of MdtNOP efflux pump, PET family 4303078 mdtO 948582 mdtO Escherichia coli str. K-12 substr. MG1655 membrane translocase (MDR) of MdtNOP efflux pump, PET family NP_418505.2 4301027 R 511145 CDS NP_418506.1 16131908 948598 complement(4303078..4304109) 1 NC_000913.3 putative membrane protein; membrane fusion protein of efflux pump 4304109 mdtN 948598 mdtN Escherichia coli str. K-12 substr. MG1655 membrane fusion protein of efflux pump NP_418506.1 4303078 R 511145 CDS YP_001165334.1 145698342 5061530 complement(4304128..4304403) 1 NC_000913.3 putative inner membrane DUF1656 family protein; efflux pump associated 4304403 ytcA 5061530 ytcA Escherichia coli str. K-12 substr. MG1655 putative inner membrane DUF1656 family protein; efflux pump associated YP_001165334.1 4304128 R 511145 CDS NP_418507.2 90111684 948597 complement(4304612..4306597) 1 NC_000913.3 metallo-beta-lactamase superfamily protein 4306597 yjcS 948597 yjcS Escherichia coli str. K-12 substr. MG1655 metallo-beta-lactamase superfamily protein NP_418507.2 4304612 R 511145 CDS NP_418508.1 16131910 948596 complement(4306870..4307799) 1 NC_000913.3 D-allose kinase 4307799 alsK 948596 alsK Escherichia coli str. K-12 substr. MG1655 D-allose kinase NP_418508.1 4306870 R 511145 CDS NP_418509.1 16131911 948595 complement(4307783..4308478) 1 NC_000913.3 allulose-6-phosphate 3-epimerase 4308478 alsE 948595 alsE Escherichia coli str. K-12 substr. MG1655 allulose-6-phosphate 3-epimerase NP_418509.1 4307783 R 511145 CDS NP_418510.1 16131912 948594 complement(4308489..4309469) 1 NC_000913.3 membrane component of ABC superfamily; D-allose transporter subunit 4309469 alsC 948594 alsC Escherichia coli str. K-12 substr. MG1655 D-allose transporter subunit NP_418510.1 4308489 R 511145 CDS NP_418511.1 16131913 948593 complement(4309448..4310980) 1 NC_000913.3 fused D-allose transporter subunits of ABC superfamily: ATP-binding components 4310980 alsA 948593 alsA Escherichia coli str. K-12 substr. MG1655 fused D-allose transporter subunits of ABC superfamily: ATP-binding components NP_418511.1 4309448 R 511145 CDS NP_418512.1 16131914 948604 complement(4311107..4312042) 1 NC_000913.3 periplasmic-binding component of ABC superfamily; D-allose transporter subunit 4312042 alsB 948604 alsB Escherichia coli str. K-12 substr. MG1655 D-allose transporter subunit NP_418512.1 4311107 R 511145 CDS NP_418513.4 90111685 948603 complement(4312101..4312991) 1 NC_000913.3 transcriptional repressor of rpiB expression; d-allose-inducible als operon transcriptional repressor; autorepressor; repressor of rpiR 4312991 alsR 948603 alsR Escherichia coli str. K-12 substr. MG1655 d-allose-inducible als operon transcriptional repressor; autorepressor; repressor of rpiR NP_418513.4 4312101 R 511145 CDS NP_418514.1 16131916 948602 4313350..4313799 1 NC_000913.3 ribose 5-phosphate isomerase B; ribose 5-phosphate isomerase B/allose 6-phosphate isomerase 4313799 rpiB 948602 rpiB Escherichia coli str. K-12 substr. MG1655 ribose 5-phosphate isomerase B/allose 6-phosphate isomerase NP_418514.1 4313350 D 511145 CDS YP_026281.1 49176458 2847754 4313868..4314197 1 NC_000913.3 conserved hypothetical protein; conserved in EDL933 and CFT073; on opposite strand of the now deaccessioned phnQ (b4091); putative periplasmic protein 4314197 yjdP 2847754 yjdP Escherichia coli str. K-12 substr. MG1655 putative periplasmic protein YP_026281.1 4313868 D 511145 CDS NP_418516.1 16131918 948600 complement(4314344..4315102) 1 NC_000913.3 phosphonate metabolism; 5-phospho-alpha-D-ribosyl 1,2-cyclic phosphate phosphodiesterase 4315102 phnP 948600 phnP Escherichia coli str. K-12 substr. MG1655 5-phospho-alpha-D-ribosyl 1,2-cyclic phosphate phosphodiesterase NP_418516.1 4314344 R 511145 CDS NP_418517.1 16131919 948599 complement(4315104..4315538) 1 NC_000913.3 putative regulator, phn operon; aminoalkylphosphonate N-acetyltransferase 4315538 phnO 948599 phnO Escherichia coli str. K-12 substr. MG1655 aminoalkylphosphonate N-acetyltransferase NP_418517.1 4315104 R 511145 CDS NP_418518.1 16131920 948608 complement(4315525..4316082) 1 NC_000913.3 ATP-binding component of phosphonate transport; ribose 1,5-bisphosphokinase 4316082 phnN 948608 phnN Escherichia coli str. K-12 substr. MG1655 ribose 1,5-bisphosphokinase NP_418518.1 4315525 R 511145 CDS NP_418519.1 16131921 948613 complement(4316082..4317218) 1 NC_000913.3 phosphonate metabolism; ribophosphonate triphosphate hydrolase 4317218 phnM 948613 phnM Escherichia coli str. K-12 substr. MG1655 ribophosphonate triphosphate hydrolase NP_418519.1 4316082 R 511145 CDS NP_418520.1 16131922 948612 complement(4317215..4317895) 1 NC_000913.3 ATP-binding component of phosphonate transport; ribophosphonate triphosphate synthase subunit; putative ABC transporter ATP-binding protein 4317895 phnL 948612 phnL Escherichia coli str. K-12 substr. MG1655 ribophosphonate triphosphate synthase subunit; putative ABC transporter ATP-binding protein NP_418520.1 4317215 R 511145 CDS YP_026282.1 49176459 948611 complement(4318006..4318764) 1 NC_000913.3 ATP-binding component of phosphonate transport; carbon-phosphorus lyase complex subunit, putative ATP transporter ATP-binding protein 4318764 phnK 948611 phnK Escherichia coli str. K-12 substr. MG1655 carbon-phosphorus lyase complex subunit, putative ATP transporter ATP-binding protein YP_026282.1 4318006 R 511145 CDS NP_418522.1 16131924 948606 complement(4318761..4319606) 1 NC_000913.3 phosphonate metabolism; carbon-phosphorus lyase, SAM-dependent 4319606 phnJ 948606 phnJ Escherichia coli str. K-12 substr. MG1655 carbon-phosphorus lyase, SAM-dependent NP_418522.1 4318761 R 511145 CDS NP_418523.1 16131925 948605 complement(4319599..4320663) 1 NC_000913.3 phosphonate metabolism; ribophosphonate triphosphate synthase complex putative catalytic subunit 4320663 phnI 948605 phnI Escherichia coli str. K-12 substr. MG1655 ribophosphonate triphosphate synthase complex putative catalytic subunit NP_418523.1 4319599 R 511145 CDS NP_418524.1 16131926 948619 complement(4320663..4321247) 1 NC_000913.3 phosphonate metabolism; ribophosphonate triphosphate synthase subunit 4321247 phnH 948619 phnH Escherichia coli str. K-12 substr. MG1655 ribophosphonate triphosphate synthase subunit NP_418524.1 4320663 R 511145 CDS NP_418525.1 16131927 948618 complement(4321244..4321696) 1 NC_000913.3 phosphonate metabolism; ribophosphonate triphosphate synthase subunit 4321696 phnG 948618 phnG Escherichia coli str. K-12 substr. MG1655 ribophosphonate triphosphate synthase subunit NP_418525.1 4321244 R 511145 CDS NP_418526.1 16131928 948617 complement(4321697..4322422) 1 NC_000913.3 putative transcriptional regulator; putative DNA-binding transcriptional regulator of phosphonate uptake and biodegradation 4322422 phnF 948617 phnF Escherichia coli str. K-12 substr. MG1655 putative DNA-binding transcriptional regulator of phosphonate uptake and biodegradation NP_418526.1 4321697 R 511145 CDS b4104 948625 complement(join(4322443..4322814,4322805..4323230)) 1 NC_000913.3 defective phosphonate ABC transporter permease;transport; Transport of small molecules: Anions; membrane channel protein component of Pn transporter; membrane component of ABC superfamily; <NULL_VALUE> 4323230 phnE 948625 phnE Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 4322443 R 511145 CDS NP_418529.1 16131931 948624 complement(4323336..4324352) 1 NC_000913.3 periplasmic binding protein component of Pn transporter; periplasmic binding component of ABC superfamily; phosphonate ABC transporter periplasmic binding protein 4324352 phnD 948624 phnD Escherichia coli str. K-12 substr. MG1655 phosphonate ABC transporter periplasmic binding protein NP_418529.1 4323336 R 511145 CDS NP_418530.1 16131932 948623 complement(4324377..4325165) 1 NC_000913.3 ATP-binding component of phosphonate transport; ATP-binding component of ABC superfamily; phosphonate ABC transporter ATP-binding subunit 4325165 phnC 948623 phnC Escherichia coli str. K-12 substr. MG1655 phosphonate ABC transporter ATP-binding subunit NP_418530.1 4324377 R 511145 CDS NP_418531.1 16131933 948622 complement(4325298..4325741) 1 NC_000913.3 metalloprotein superfamily protein 4325741 yjdN 948622 yjdN Escherichia coli str. K-12 substr. MG1655 metalloprotein superfamily protein NP_418531.1 4325298 R 511145 CDS NP_418532.1 16131934 948621 complement(4326399..4326734) 1 NC_000913.3 zinc-ribbon family protein 4326734 yjdM 948621 yjdM Escherichia coli str. K-12 substr. MG1655 zinc-ribbon family protein NP_418532.1 4326399 R 511145 CDS NP_418533.1 16131935 948620 4327135..4329363 1 NC_000913.3 putative vimentin; clamp-binding sister replication fork colocalization protein, dynamin-related 4329363 crfC 948620 crfC Escherichia coli str. K-12 substr. MG1655 clamp-binding sister replication fork colocalization protein, dynamin-related NP_418533.1 4327135 D 511145 CDS NP_418534.4 90111687 948633 4329360..4330238 1 NC_000913.3 YjcZ family protein, mutational suppressor of yhjH motility mutation 4330238 yjcZ 948633 yjcZ Escherichia coli str. K-12 substr. MG1655 YjcZ family protein, mutational suppressor of yhjH motility mutation NP_418534.4 4329360 D 511145 CDS NP_418535.1 16131937 948626 4330502..4332004 1 NC_000913.3 low-affinity transport system; proline permease II; proline/glycine betaine transporter 4332004 proP 948626 proP Escherichia coli str. K-12 substr. MG1655 proline/glycine betaine transporter NP_418535.1 4330502 D 511145 CDS YP_004831120.1 345452724 11115379 4332116..4332205 1 NC_000913.3 putative membrane-bound BasS regulator 4332205 pmrR 11115379 pmrR Escherichia coli str. K-12 substr. MG1655 putative membrane-bound BasS regulator YP_004831120.1 4332116 D 511145 CDS NP_418536.1 16131938 948632 complement(4332181..4333272) 1 NC_000913.3 sensor protein for basR; sensory histidine kinase in two-component regulatory system with BasR 4333272 basS 948632 basS Escherichia coli str. K-12 substr. MG1655 sensory histidine kinase in two-component regulatory system with BasR NP_418536.1 4332181 R 511145 CDS NP_418537.1 16131939 948631 complement(4333282..4333950) 1 NC_000913.3 transcriptional regulatory protein, member of 2-component regulatory system; response regulator in two-component regulatory system with BasS 4333950 basR 948631 basR Escherichia coli str. K-12 substr. MG1655 response regulator in two-component regulatory system with BasS NP_418537.1 4333282 R 511145 CDS NP_418538.2 90111688 948629 complement(4333947..4335590) 1 NC_000913.3 lipid A phosphoethanolamine transferase 4335590 eptA 948629 eptA Escherichia coli str. K-12 substr. MG1655 lipid A phosphoethanolamine transferase NP_418538.2 4333947 R 511145 CDS NP_418539.1 16131941 948628 complement(4335694..4337031) 1 NC_000913.3 putative amino acid/amine transport protein, cryptic; arginine:agmatine antiporter 4337031 adiC 948628 adiC Escherichia coli str. K-12 substr. MG1655 arginine:agmatine antiporter NP_418539.1 4335694 R 511145 CDS NP_418540.1 16131942 948627 complement(4337168..4337929) 1 NC_000913.3 putative ARAC-type regulatory protein; adi system transcriptional activator 4337929 adiY 948627 adiY Escherichia coli str. K-12 substr. MG1655 adi system transcriptional activator NP_418540.1 4337168 R 511145 CDS NP_418541.2 221800782 948638 complement(4338254..4340521) 1 NC_000913.3 arginine decarboxylase 4340521 adiA 948638 adiA Escherichia coli str. K-12 substr. MG1655 arginine decarboxylase NP_418541.2 4338254 R 511145 CDS NP_418542.1 16131944 948637 complement(4340720..4341628) 1 NC_000913.3 regulator of melibiose operon; melibiose operon transcriptional regulator; autoregulator 4341628 melR 948637 melR Escherichia coli str. K-12 substr. MG1655 melibiose operon transcriptional regulator; autoregulator NP_418542.1 4340720 R 511145 CDS NP_418543.1 16131945 948636 4341911..4343266 1 NC_000913.3 alpha-galactosidase; alpha-galactosidase, NAD(P)-binding 4343266 melA 948636 melA Escherichia coli str. K-12 substr. MG1655 alpha-galactosidase, NAD(P)-binding NP_418543.1 4341911 D 511145 CDS NP_418544.2 345452725 948635 4343369..4344790 1 NC_000913.3 melibiose permease II; melibiose:sodium symporter 4344790 melB 948635 melB Escherichia coli str. K-12 substr. MG1655 melibiose:sodium symporter NP_418544.2 4343369 D 511145 CDS NP_418545.1 16131947 948634 complement(4344929..4345558) 1 NC_000913.3 DUF2238 family inner membrane protein 4345558 yjdF 948634 yjdF Escherichia coli str. K-12 substr. MG1655 DUF2238 family inner membrane protein NP_418545.1 4344929 R 511145 CDS NP_418546.1 16131948 948642 complement(4345680..4347326) 1 NC_000913.3 fumarase B= fumarate hydratase Class I; anaerobic isozyme; anaerobic class I fumarate hydratase (fumarase B) 4347326 fumB 948642 fumB Escherichia coli str. K-12 substr. MG1655 anaerobic class I fumarate hydratase (fumarase B) NP_418546.1 4345680 R 511145 CDS NP_418547.1 16131949 948641 complement(4347404..4348744) 1 NC_000913.3 anaerobic dicarboxylate transport; C4-dicarboxylate transporter, anaerobic; DcuS co-sensor 4348744 dcuB 948641 dcuB Escherichia coli str. K-12 substr. MG1655 C4-dicarboxylate transporter, anaerobic; DcuS co-sensor NP_418547.1 4347404 R 511145 CDS NP_418548.1 16131950 948640 complement(4349315..4350034) 1 NC_000913.3 response regulator in two-component regulatory system with DcuS 4350034 dcuR 948640 dcuR Escherichia coli str. K-12 substr. MG1655 response regulator in two-component regulatory system with DcuS NP_418548.1 4349315 R 511145 CDS NP_418549.1 16131951 948639 complement(4350031..4351662) 1 NC_000913.3 sensory histidine kinase in two-component regulatory system with DcuR, regulator of anaerobic fumarate respiration 4351662 dcuS 948639 dcuS Escherichia coli str. K-12 substr. MG1655 sensory histidine kinase in two-component regulatory system with DcuR, regulator of anaerobic fumarate respiration NP_418549.1 4350031 R 511145 CDS NP_418550.1 16131952 948648 4351843..4352073 1 NC_000913.3 putative 4Fe-4S mono-cluster protein 4352073 yjdI 948648 yjdI Escherichia coli str. K-12 substr. MG1655 putative 4Fe-4S mono-cluster protein NP_418550.1 4351843 D 511145 CDS NP_418551.1 16131953 948647 4352085..4352357 1 NC_000913.3 putative acyl-CoA transferase 4352357 yjdJ 948647 yjdJ Escherichia coli str. K-12 substr. MG1655 putative acyl-CoA transferase NP_418551.1 4352085 D 511145 CDS NP_418552.1 16131954 948646 4352584..4352880 1 NC_000913.3 uncharacterized protein 4352880 yjdK 948646 yjdK Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_418552.1 4352584 D 511145 CDS YP_588474.1 94541131 1450308 4352908..4353081 1 NC_000913.3 uncharacterized protein 4353081 yjdO 1450308 yjdO Escherichia coli str. K-12 substr. MG1655 uncharacterized protein YP_588474.1 4352908 D 511145 CDS NP_418553.1 16131955 948645 complement(4353200..4354717) 1 NC_000913.3 lysine tRNA synthetase, inducible; heat shock protein; lysine tRNA synthetase, inducible 4354717 lysU 948645 lysU Escherichia coli str. K-12 substr. MG1655 lysine tRNA synthetase, inducible NP_418553.1 4353200 R 511145 CDS NP_418554.1 16131956 948644 complement(4354954..4356411) 1 NC_000913.3 putative peptide transporter; dipeptide and tripeptide permease 4356411 dtpC 948644 dtpC Escherichia coli str. K-12 substr. MG1655 dipeptide and tripeptide permease NP_418554.1 4354954 R 511145 CDS NP_418555.1 16131957 948643 complement(4356470..4358617) 1 NC_000913.3 lysine decarboxylase, acid-inducible 4358617 cadA 948643 cadA Escherichia coli str. K-12 substr. MG1655 lysine decarboxylase, acid-inducible NP_418555.1 4356470 R 511145 CDS NP_418556.1 16131958 948654 complement(4358697..4360031) 1 NC_000913.3 transport of lysine/cadaverine; putative lysine/cadaverine transporter 4360031 cadB 948654 cadB Escherichia coli str. K-12 substr. MG1655 putative lysine/cadaverine transporter NP_418556.1 4358697 R 511145 CDS NP_418557.1 16131959 948653 complement(4360396..4361934) 1 NC_000913.3 transcriptional activator of cad operon; cadBA operon transcriptional activator 4361934 cadC 948653 cadC Escherichia coli str. K-12 substr. MG1655 cadBA operon transcriptional activator NP_418557.1 4360396 R 511145 CDS b4654 5625580 complement(join(4362191..4362271,4362270..4362353)) 1 NC_000913.3 pseudogene, P4-like integrase remnant; <NULL_VALUE> 4362353 yjdQ 5625580 yjdQ Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 4362191 R 511145 CDS NP_418558.2 90111689 948650 complement(4362733..4363308) 1 NC_000913.3 putative transcriptional regulator 4363308 yjdC 948650 yjdC Escherichia coli str. K-12 substr. MG1655 putative transcriptional regulator NP_418558.2 4362733 R 511145 CDS NP_418559.1 16131961 948649 complement(4363345..4365042) 1 NC_000913.3 thiol:disulfide interchange protein; copper tolerance; fused thiol:disulfide interchange protein: activator of DsbC/conserved protein 4365042 dsbD 948649 dsbD Escherichia coli str. K-12 substr. MG1655 fused thiol:disulfide interchange protein: activator of DsbC/conserved protein NP_418559.1 4363345 R 511145 CDS NP_418560.1 16131962 948660 complement(4365018..4365356) 1 NC_000913.3 divalent cation tolerance protein; cytochrome c biogenesis; divalent-cation tolerance protein, copper sensitivity 4365356 cutA 948660 cutA Escherichia coli str. K-12 substr. MG1655 divalent-cation tolerance protein, copper sensitivity NP_418560.1 4365018 R 511145 CDS NP_418561.1 16131963 948659 complement(4365472..4366773) 1 NC_000913.3 anaerobic dicarboxylate transport; C4-dicarboxylate antiporter 4366773 dcuA 948659 dcuA Escherichia coli str. K-12 substr. MG1655 C4-dicarboxylate antiporter NP_418561.1 4365472 R 511145 CDS NP_418562.4 90111690 948658 complement(4366891..4368327) 1 NC_000913.3 aspartate ammonia-lyase (aspartase); aspartate ammonia-lyase 4368327 aspA 948658 aspA Escherichia coli str. K-12 substr. MG1655 aspartate ammonia-lyase NP_418562.4 4366891 R 511145 CDS NP_418564.2 90111691 948657 4368664..4369140 1 NC_000913.3 suppressor of F exclusion of phage T7 4369140 fxsA 948657 fxsA Escherichia coli str. K-12 substr. MG1655 suppressor of F exclusion of phage T7 NP_418564.2 4368664 D 511145 CDS NP_418565.1 16131966 948656 complement(4369156..4370412) 1 NC_000913.3 putative transport; putative transporter 4370412 yjeH 948656 yjeH Escherichia coli str. K-12 substr. MG1655 putative transporter NP_418565.1 4369156 R 511145 CDS NP_418566.1 16131967 948655 4370688..4370981 1 NC_000913.3 GroES, 10 Kd chaperone binds to Hsp60 in pres. Mg-ATP, suppressing its ATPase activity; Cpn10 chaperonin GroES, small subunit of GroESL 4370981 groS 948655 groS Escherichia coli str. K-12 substr. MG1655 Cpn10 chaperonin GroES, small subunit of GroESL NP_418566.1 4370688 D 511145 CDS NP_418567.1 16131968 948665 4371025..4372671 1 NC_000913.3 Cpn60 chaperonin GroEL, large subunit of GroESL 4372671 groL 948665 groL Escherichia coli str. K-12 substr. MG1655 Cpn60 chaperonin GroEL, large subunit of GroESL NP_418567.1 4371025 D 511145 CDS NP_418568.2 90111692 948664 4372809..4373162 1 NC_000913.3 DUF4156 family lipoprotein 4373162 yjeI 948664 yjeI Escherichia coli str. K-12 substr. MG1655 DUF4156 family lipoprotein NP_418568.2 4372809 D 511145 CDS NP_418569.1 16131970 948663 complement(4373365..4374234) 1 NC_000913.3 uncharacterized protein 4374234 yjeJ 948663 yjeJ Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_418569.1 4373365 R 511145 CDS NP_418570.1 16131971 948662 complement(4374629..4375657) 1 NC_000913.3 EF-P-Lys34 lysylation protein; weak lysine 2,3-aminomutase 4375657 epmB 948662 epmB Escherichia coli str. K-12 substr. MG1655 EF-P-Lys34 lysylation protein; weak lysine 2,3-aminomutase NP_418570.1 4374629 R 511145 CDS NP_418571.1 16131972 948661 4375699..4376265 1 NC_000913.3 elongation factor P (EF-P); polyproline-specific translation elongation factor EF-P 4376265 efp 948661 efp Escherichia coli str. K-12 substr. MG1655 polyproline-specific translation elongation factor EF-P NP_418571.1 4375699 D 511145 CDS YP_026283.1 49176462 2847736 4376317..4376442 1 NC_000913.3 entericidin A; antidote to lipoprotein entericidin B; component of a chromosomally encoded addiction module; entericidin A membrane lipoprotein, antidote entericidin B 4376442 ecnA 2847736 ecnA Escherichia coli str. K-12 substr. MG1655 entericidin A membrane lipoprotein, antidote entericidin B YP_026283.1 4376317 D 511145 CDS YP_026284.1 49176463 2847737 4376553..4376699 1 NC_000913.3 entericidin B; bacteriolytic lipoprotein; component of a chromosomally encoded addiction module; entericidin B membrane lipoprotein 4376699 ecnB 2847737 ecnB Escherichia coli str. K-12 substr. MG1655 entericidin B membrane lipoprotein YP_026284.1 4376553 D 511145 CDS NP_418572.4 90111693 948671 4376875..4377192 1 NC_000913.3 suppresses groEL, may be chaperone; multidrug efflux system protein 4377192 sugE 948671 sugE Escherichia coli str. K-12 substr. MG1655 multidrug efflux system protein NP_418572.4 4376875 D 511145 CDS NP_418573.1 16131974 948670 complement(4377189..4377722) 1 NC_000913.3 outer membrane lipoprotein (lipocalin), cell division and growth function 4377722 blc 948670 blc Escherichia coli str. K-12 substr. MG1655 outer membrane lipoprotein (lipocalin), cell division and growth function NP_418573.1 4377189 R 511145 CDS NP_418574.1 16131975 948669 complement(4377811..4378944) 1 NC_000913.3 beta-lactamase; penicillin resistance; penicillin-binding protein; beta-lactamase, intrinsically weak 4378944 ampC 948669 ampC Escherichia coli str. K-12 substr. MG1655 penicillin-binding protein; beta-lactamase, intrinsically weak NP_418574.1 4377811 R 511145 CDS NP_418575.1 16131976 948668 complement(4379007..4379366) 1 NC_000913.3 fumarate reductase, anaerobic, membrane anchor polypeptide; fumarate reductase (anaerobic), membrane anchor subunit 4379366 frdD 948668 frdD Escherichia coli str. K-12 substr. MG1655 fumarate reductase (anaerobic), membrane anchor subunit NP_418575.1 4379007 R 511145 CDS NP_418576.1 16131977 948680 complement(4379377..4379772) 1 NC_000913.3 fumarate reductase, anaerobic, membrane anchor polypeptide; fumarate reductase (anaerobic), membrane anchor subunit 4379772 frdC 948680 frdC Escherichia coli str. K-12 substr. MG1655 fumarate reductase (anaerobic), membrane anchor subunit NP_418576.1 4379377 R 511145 CDS NP_418577.1 16131978 948666 complement(4379783..4380517) 1 NC_000913.3 fumarate reductase, anaerobic, iron-sulfur protein subunit; fumarate reductase (anaerobic), Fe-S subunit 4380517 frdB 948666 frdB Escherichia coli str. K-12 substr. MG1655 fumarate reductase (anaerobic), Fe-S subunit NP_418577.1 4379783 R 511145 CDS NP_418578.1 16131979 948667 complement(4380510..4382318) 1 NC_000913.3 fumarate reductase, anaerobic, flavoprotein subunit; fumarate reductase (anaerobic) catalytic and NAD/flavoprotein subunit 4382318 frdA 948667 frdA Escherichia coli str. K-12 substr. MG1655 fumarate reductase (anaerobic) catalytic and NAD/flavoprotein subunit NP_418578.1 4380510 R 511145 CDS NP_418579.2 90111694 948672 4382643..4383620 1 NC_000913.3 putative lysyl-tRNA synthetase; Elongation Factor P Lys34 lysyltransferase 4383620 epmA 948672 epmA Escherichia coli str. K-12 substr. MG1655 Elongation Factor P Lys34 lysyltransferase NP_418579.2 4382643 D 511145 CDS NP_418580.2 90111695 948679 4383839..4385341 1 NC_000913.3 putative transport; putative transporter 4385341 yjeM 948679 yjeM Escherichia coli str. K-12 substr. MG1655 putative transporter NP_418580.2 4383839 D 511145 CDS NP_418581.1 16131982 948678 4385393..4385707 1 NC_000913.3 uncharacterized protein 4385707 yjeN 948678 yjeN Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_418581.1 4385393 D 511145 CDS NP_418582.1 16131983 948677 4385704..4386018 1 NC_000913.3 inner membrane protein 4386018 yjeO 948677 yjeO Escherichia coli str. K-12 substr. MG1655 inner membrane protein NP_418582.1 4385704 D 511145 CDS NP_418583.1 16131984 948676 complement(4386047..4389370) 1 NC_000913.3 putative periplasmic binding protein; mechanosensitive channel protein, miniconductance 4389370 mscM 948676 mscM Escherichia coli str. K-12 substr. MG1655 mechanosensitive channel protein, miniconductance NP_418583.1 4386047 R 511145 CDS NP_418584.1 16131985 948673 complement(4389392..4390360) 1 NC_000913.3 phosphatidylserine decarboxylase; phospholipid synthesis; phosphatidylserine decarboxylase 4390360 psd 948673 psd Escherichia coli str. K-12 substr. MG1655 phosphatidylserine decarboxylase NP_418584.1 4389392 R 511145 CDS NP_418585.4 90111696 948674 complement(4390457..4391509) 1 NC_000913.3 ribosome small subunit-dependent GTPase A 4391509 rsgA 948674 rsgA Escherichia coli str. K-12 substr. MG1655 ribosome small subunit-dependent GTPase A NP_418585.4 4390457 R 511145 CDS NP_418586.4 90111697 948675 4391604..4392149 1 NC_000913.3 oligoribonuclease 4392149 orn 948675 orn Escherichia coli str. K-12 substr. MG1655 oligoribonuclease NP_418586.4 4391604 D 511145 CDS YP_002791261.1 226524762 7751630 4392892..4392945 1 NC_000913.3 uncharacterized protein 4392945 yjeV 7751630 yjeV Escherichia coli str. K-12 substr. MG1655 uncharacterized protein YP_002791261.1 4392892 D 511145 CDS NP_418587.1 16131988 948686 complement(4392928..4394067) 1 NC_000913.3 epoxyqueuosine reductase, cobalamine-stimulated; queosine biosynthesis 4394067 queG 948686 queG Escherichia coli str. K-12 substr. MG1655 epoxyqueuosine reductase, cobalamine-stimulated; queosine biosynthesis NP_418587.1 4392928 R 511145 CDS NP_418588.1 16131989 948685 4394066..4395613 1 NC_000913.3 bifunctional NAD(P)H-hydrate repair enzyme; C-terminal domain ADP-dependent (S)-NAD(P)H-hydrate dehydratase and N-terminal domain NAD(P)H-hydrate epimerase 4395613 nnr 948685 nnr Escherichia coli str. K-12 substr. MG1655 bifunctional NAD(P)H-hydrate repair enzyme; C-terminal domain ADP-dependent (S)-NAD(P)H-hydrate dehydratase and N-terminal domain NAD(P)H-hydrate epimerase NP_418588.1 4394066 D 511145 CDS NP_418589.1 16131990 948684 4395585..4396046 1 NC_000913.3 tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein; ADP binding protein 4396046 tsaE 948684 tsaE Escherichia coli str. K-12 substr. MG1655 tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein; ADP binding protein NP_418589.1 4395585 D 511145 CDS NP_418590.1 16131991 948683 4396065..4397402 1 NC_000913.3 N-acetylmuramoyl-l-alanine amidase II; a murein hydrolase; N-acetylmuramoyl-l-alanine amidase II 4397402 amiB 948683 amiB Escherichia coli str. K-12 substr. MG1655 N-acetylmuramoyl-l-alanine amidase II NP_418590.1 4396065 D 511145 CDS NP_418591.1 16131992 948691 4397412..4399259 1 NC_000913.3 enzyme in methyl-directed mismatch repair; methyl-directed mismatch repair protein 4399259 mutL 948691 mutL Escherichia coli str. K-12 substr. MG1655 methyl-directed mismatch repair protein NP_418591.1 4397412 D 511145 CDS NP_418592.1 16131993 948690 4399252..4400202 1 NC_000913.3 delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase 4400202 miaA 948690 miaA Escherichia coli str. K-12 substr. MG1655 delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase NP_418592.1 4399252 D 511145 CDS NP_418593.1 16131994 948689 4400288..4400596 1 NC_000913.3 host factor I for bacteriophage Q beta replication, a growth-related protein; global sRNA chaperone; HF-I, host factor for RNA phage Q beta replication 4400596 hfq 948689 hfq Escherichia coli str. K-12 substr. MG1655 global sRNA chaperone; HF-I, host factor for RNA phage Q beta replication NP_418593.1 4400288 D 511145 CDS NP_418594.1 16131995 948688 4400672..4401952 1 NC_000913.3 GTP - binding subunit of protease specific for phage lambda cII repressor; GTPase, stimulated by 50S subunit binding 4401952 hflX 948688 hflX Escherichia coli str. K-12 substr. MG1655 GTPase, stimulated by 50S subunit binding NP_418594.1 4400672 D 511145 CDS NP_418595.1 16131996 948698 4402038..4403297 1 NC_000913.3 protease specific for phage lambda cII repressor; modulator for HflB protease specific for phage lambda cII repressor 4403297 hflK 948698 hflK Escherichia coli str. K-12 substr. MG1655 modulator for HflB protease specific for phage lambda cII repressor NP_418595.1 4402038 D 511145 CDS NP_418596.1 16131997 948697 4403300..4404304 1 NC_000913.3 protease specific for phage lambda cII repressor; modulator for HflB protease specific for phage lambda cII repressor 4404304 hflC 948697 hflC Escherichia coli str. K-12 substr. MG1655 modulator for HflB protease specific for phage lambda cII repressor NP_418596.1 4403300 D 511145 CDS NP_418597.1 16131998 948696 4404386..4404583 1 NC_000913.3 DUF2065 family protein 4404583 yjeT 948696 yjeT Escherichia coli str. K-12 substr. MG1655 DUF2065 family protein NP_418597.1 4404386 D 511145 CDS NP_418598.1 16131999 948695 4404687..4405985 1 NC_000913.3 adenylosuccinate synthetase 4405985 purA 948695 purA Escherichia coli str. K-12 substr. MG1655 adenylosuccinate synthetase NP_418598.1 4404687 D 511145 CDS NP_418599.1 16132000 948693 4406190..4406615 1 NC_000913.3 nitric oxide-sensitive repressor for NO regulon 4406615 nsrR 948693 nsrR Escherichia coli str. K-12 substr. MG1655 nitric oxide-sensitive repressor for NO regulon NP_418599.1 4406190 D 511145 CDS NP_418600.4 90111698 948692 4406654..4409095 1 NC_000913.3 exoribonuclease R, RNase R 4409095 rnr 948692 rnr Escherichia coli str. K-12 substr. MG1655 exoribonuclease R, RNase R NP_418600.4 4406654 D 511145 CDS NP_418601.1 16132002 948694 4409275..4410006 1 NC_000913.3 23S rRNA mG2251 2'-O-ribose methyltransferase, SAM-dependent 4410006 rlmB 948694 rlmB Escherichia coli str. K-12 substr. MG1655 23S rRNA mG2251 2'-O-ribose methyltransferase, SAM-dependent NP_418601.1 4409275 D 511145 CDS NP_418602.1 16132003 948704 4410133..4410534 1 NC_000913.3 DUF2170 family protein 4410534 yjfI 948704 yjfI Escherichia coli str. K-12 substr. MG1655 DUF2170 family protein NP_418602.1 4410133 D 511145 CDS NP_418603.1 16132004 948703 4410553..4411251 1 NC_000913.3 putative alpha helical protein; PspA/IM30 family protein 4411251 yjfJ 948703 yjfJ Escherichia coli str. K-12 substr. MG1655 PspA/IM30 family protein NP_418603.1 4410553 D 511145 CDS NP_418604.1 16132005 948702 4411302..4411961 1 NC_000913.3 DUF2491 family protein 4411961 yjfK 948702 yjfK Escherichia coli str. K-12 substr. MG1655 DUF2491 family protein NP_418604.1 4411302 D 511145 CDS NP_418605.1 16132006 948701 4411979..4412377 1 NC_000913.3 UPF0719 family inner membrane protein 4412377 yjfL 948701 yjfL Escherichia coli str. K-12 substr. MG1655 UPF0719 family inner membrane protein NP_418605.1 4411979 D 511145 CDS NP_418606.1 16132007 948700 4412387..4413025 1 NC_000913.3 DUF1190 family protein 4413025 yjfM 948700 yjfM Escherichia coli str. K-12 substr. MG1655 DUF1190 family protein NP_418606.1 4412387 D 511145 CDS NP_418607.1 16132008 948699 4413028..4414191 1 NC_000913.3 putative synthetase/amidase; ATP-Grasp family ATPase 4414191 yjfC 948699 yjfC Escherichia coli str. K-12 substr. MG1655 ATP-Grasp family ATPase NP_418607.1 4413028 D 511145 CDS NP_418608.6 162135915 948710 4414275..4415900 1 NC_000913.3 putative acyl coenzyme A dehydrogenase; DNA alkylation damage repair protein; flavin-containing DNA binding protein, weak isovaleryl CoA dehydrogenase 4415900 aidB 948710 aidB Escherichia coli str. K-12 substr. MG1655 DNA alkylation damage repair protein; flavin-containing DNA binding protein, weak isovaleryl CoA dehydrogenase NP_418608.6 4414275 D 511145 CDS NP_418609.4 90111700 948709 complement(4416017..4416292) 1 NC_000913.3 DUF1471 family periplasmic protein 4416292 yjfN 948709 yjfN Escherichia coli str. K-12 substr. MG1655 DUF1471 family periplasmic protein NP_418609.4 4416017 R 511145 CDS NP_418610.4 90111701 948708 complement(4416441..4416770) 1 NC_000913.3 bioflm peroxide resistance protein 4416770 bsmA 948708 bsmA Escherichia coli str. K-12 substr. MG1655 bioflm peroxide resistance protein NP_418610.4 4416441 R 511145 CDS NP_418611.1 16132012 948707 4416952..4417701 1 NC_000913.3 acyl CoA esterase 4417701 yjfP 948707 yjfP Escherichia coli str. K-12 substr. MG1655 acyl CoA esterase NP_418611.1 4416952 D 511145 CDS NP_418612.1 16132013 948706 complement(4417698..4418453) 1 NC_000913.3 putative DEOR-type transcriptional regulator; transcriptional repressor for the L-ascorbate utilization (ula) divergent operon 4418453 ulaR 948706 ulaR Escherichia coli str. K-12 substr. MG1655 transcriptional repressor for the L-ascorbate utilization (ula) divergent operon NP_418612.1 4417698 R 511145 CDS NP_418613.2 90111702 948705 complement(4418561..4419625) 1 NC_000913.3 L-ascorbate 6-phosphate lactonase 4419625 ulaG 948705 ulaG Escherichia coli str. K-12 substr. MG1655 L-ascorbate 6-phosphate lactonase NP_418613.2 4418561 R 511145 CDS NP_418614.4 90111703 948717 4419980..4421377 1 NC_000913.3 L-ascorbate-specific enzyme IIC permease component of PTS 4421377 ulaA 948717 ulaA Escherichia coli str. K-12 substr. MG1655 L-ascorbate-specific enzyme IIC permease component of PTS NP_418614.4 4419980 D 511145 CDS NP_418615.1 16132016 948716 4421393..4421698 1 NC_000913.3 L-ascorbate-specific enzyme IIB component of PTS 4421698 ulaB 948716 ulaB Escherichia coli str. K-12 substr. MG1655 L-ascorbate-specific enzyme IIB component of PTS NP_418615.1 4421393 D 511145 CDS NP_418616.1 16132017 948715 4421708..4422172 1 NC_000913.3 putative PTS system enzyme II A component; L-ascorbate-specific enzyme IIA component of PTS 4422172 ulaC 948715 ulaC Escherichia coli str. K-12 substr. MG1655 L-ascorbate-specific enzyme IIA component of PTS NP_418616.1 4421708 D 511145 CDS NP_418617.1 16132018 948714 4422186..4422836 1 NC_000913.3 probable hexulose-6-phosphate synthase; 3-keto-L-gulonate 6-phosphate decarboxylase 4422836 ulaD 948714 ulaD Escherichia coli str. K-12 substr. MG1655 3-keto-L-gulonate 6-phosphate decarboxylase NP_418617.1 4422186 D 511145 CDS NP_418618.1 16132019 948712 4422846..4423700 1 NC_000913.3 putative hexulose-6-phosphate isomerase; L-xylulose 5-phosphate 3-epimerase 4423700 ulaE 948712 ulaE Escherichia coli str. K-12 substr. MG1655 L-xylulose 5-phosphate 3-epimerase NP_418618.1 4422846 D 511145 CDS NP_418619.1 16132020 948711 4423700..4424386 1 NC_000913.3 putative epimerase/aldolase; L-ribulose 5-phosphate 4-epimerase 4424386 ulaF 948711 ulaF Escherichia coli str. K-12 substr. MG1655 L-ribulose 5-phosphate 4-epimerase NP_418619.1 4423700 D 511145 CDS NP_418620.1 16132021 948713 complement(4424516..4424791) 1 NC_000913.3 YhcN family protein, periplasmic 4424791 yjfY 948713 yjfY Escherichia coli str. K-12 substr. MG1655 YhcN family protein, periplasmic NP_418620.1 4424516 R 511145 CDS NP_418621.5 296044035 948723 4425118..4425513 1 NC_000913.3 30S ribosomal subunit protein S6 4425513 rpsF 948723 rpsF Escherichia coli str. K-12 substr. MG1655 30S ribosomal subunit protein S6 NP_418621.5 4425118 D 511145 CDS NP_418622.1 16132023 948722 4425520..4425834 1 NC_000913.3 primosomal replication protein N; primosomal protein N 4425834 priB 948722 priB Escherichia coli str. K-12 substr. MG1655 primosomal protein N NP_418622.1 4425520 D 511145 CDS NP_418623.1 16132024 948721 4425839..4426066 1 NC_000913.3 30S ribosomal subunit protein S18 4426066 rpsR 948721 rpsR Escherichia coli str. K-12 substr. MG1655 30S ribosomal subunit protein S18 NP_418623.1 4425839 D 511145 CDS NP_418624.1 16132025 948720 4426108..4426557 1 NC_000913.3 50S ribosomal subunit protein L9 4426557 rplI 948720 rplI Escherichia coli str. K-12 substr. MG1655 50S ribosomal subunit protein L9 NP_418624.1 4426108 D 511145 CDS NP_418625.1 16132026 948719 complement(4426628..4427422) 1 NC_000913.3 uncharacterized protein 4427422 yjfZ 948719 yjfZ Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_418625.1 4426628 R 511145 CDS b4205 948718 4427694..4428095 1 NC_000913.3 pseudogene, related to transcriptional regulators; <NULL_VALUE> 4428095 ytfA 948718 ytfA Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 4427694 D 511145 CDS NP_418627.4 162135916 948727 complement(4428079..4428717) 1 NC_000913.3 OapA family protein 4428717 ytfB 948727 ytfB Escherichia coli str. K-12 substr. MG1655 OapA family protein NP_418627.4 4428079 R 511145 CDS NP_418628.4 90111705 948726 4428935..4429555 1 NC_000913.3 FKBP-type 22KD peptidyl-prolyl cis-trans isomerase (rotamase); FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) 4429555 fklB 948726 fklB Escherichia coli str. K-12 substr. MG1655 FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) NP_418628.4 4428935 D 511145 CDS NP_418629.1 16132030 948725 4429864..4431276 1 NC_000913.3 transport of D-alanine, D-serine, and glycine; D-alanine/D-serine/glycine transporter 4431276 cycA 948725 cycA Escherichia coli str. K-12 substr. MG1655 D-alanine/D-serine/glycine transporter NP_418629.1 4429864 D 511145 CDS NP_418630.1 16132031 948724 complement(4431321..4431983) 1 NC_000913.3 iron-sulfur cluster repair protein RIC 4431983 ytfE 948724 ytfE Escherichia coli str. K-12 substr. MG1655 iron-sulfur cluster repair protein RIC NP_418630.1 4431321 R 511145 CDS NP_418631.2 226524763 948732 complement(4432091..4433056) 1 NC_000913.3 putative transmembrane subunit; DMT transporter family inner membrane protein 4433056 ytfF 948732 ytfF Escherichia coli str. K-12 substr. MG1655 DMT transporter family inner membrane protein NP_418631.2 4432091 R 511145 CDS NP_418632.1 16132033 948731 complement(4433164..4434024) 1 NC_000913.3 putative oxidoreductase; NAD(P)H:quinone oxidoreductase 4434024 qorB 948731 qorB Escherichia coli str. K-12 substr. MG1655 NAD(P)H:quinone oxidoreductase NP_418632.1 4433164 R 511145 CDS NP_418633.4 90111706 948730 4434113..4434493 1 NC_000913.3 DUF24 family HxlR-type putative transcriptional regulator 4434493 ytfH 948730 ytfH Escherichia coli str. K-12 substr. MG1655 DUF24 family HxlR-type putative transcriptional regulator NP_418633.4 4434113 D 511145 CDS NP_418634.1 16132035 948729 complement(4434622..4436565) 1 NC_000913.3 2':3'-cyclic-nucleotide 2'-phosphodiesterase 4436565 cpdB 948729 cpdB Escherichia coli str. K-12 substr. MG1655 2':3'-cyclic-nucleotide 2'-phosphodiesterase NP_418634.1 4434622 R 511145 CDS NP_418635.1 16132036 948728 4436755..4437495 1 NC_000913.3 affects pool of 3'-phosphoadenosine-5'-phosphosulfate in pathway of sulfite synthesis; 3'(2'),5'-bisphosphate nucleotidase 4437495 cysQ 948728 cysQ Escherichia coli str. K-12 substr. MG1655 3'(2'),5'-bisphosphate nucleotidase NP_418635.1 4436755 D 511145 CDS YP_026285.1 49176474 948738 4437707..4438645 1 NC_000913.3 uncharacterized protein 4438645 ytfI 948738 ytfI Escherichia coli str. K-12 substr. MG1655 uncharacterized protein YP_026285.1 4437707 D 511145 CDS NP_418637.1 16132038 948737 complement(4438708..4439262) 1 NC_000913.3 putative transcriptional regulator 4439262 ytfJ 948737 ytfJ Escherichia coli str. K-12 substr. MG1655 putative transcriptional regulator NP_418637.1 4438708 R 511145 CDS NP_418638.2 90111707 948736 4439587..4439793 1 NC_000913.3 DUF1107 family protein 4439793 ytfK 948736 ytfK Escherichia coli str. K-12 substr. MG1655 DUF1107 family protein NP_418638.2 4439587 D 511145 CDS NP_418639.1 16132040 948735 complement(4439872..4441215) 1 NC_000913.3 putative transport protein; UPF0053 family inner membrane protein 4441215 ytfL 948735 ytfL Escherichia coli str. K-12 substr. MG1655 UPF0053 family inner membrane protein NP_418639.1 4439872 R 511145 CDS NP_418640.1 16132041 948734 complement(4441538..4442176) 1 NC_000913.3 peptide methionine sulfoxide reductase; methionine sulfoxide reductase A 4442176 msrA 948734 msrA Escherichia coli str. K-12 substr. MG1655 methionine sulfoxide reductase A NP_418640.1 4441538 R 511145 CDS NP_418641.1 16132042 948733 4442382..4444115 1 NC_000913.3 translocation and assembly module for autotransporter export, outer membrane subunit 4444115 tamA 948733 tamA Escherichia coli str. K-12 substr. MG1655 translocation and assembly module for autotransporter export, outer membrane subunit NP_418641.1 4442382 D 511145 CDS NP_418642.1 16132043 948742 4444112..4447891 1 NC_000913.3 translocation and assembly module for autotransporter export, inner membrane subunit 4447891 tamB 948742 tamB Escherichia coli str. K-12 substr. MG1655 translocation and assembly module for autotransporter export, inner membrane subunit NP_418642.1 4444112 D 511145 CDS NP_418643.1 16132044 948741 4447894..4448235 1 NC_000913.3 GGCT-like protein 4448235 ytfP 948741 ytfP Escherichia coli str. K-12 substr. MG1655 GGCT-like protein NP_418643.1 4447894 D 511145 CDS NP_418645.2 90111708 948739 4448447..4448698 1 NC_000913.3 suppressor of inhibitory function of ChpB, PemI-like, autoregulated; antitoxin of the ChpBS toxin-antitoxin system 4448698 chpS 948739 chpS Escherichia coli str. K-12 substr. MG1655 antitoxin of the ChpBS toxin-antitoxin system NP_418645.2 4448447 D 511145 CDS NP_418646.1 16132047 948747 4448692..4449042 1 NC_000913.3 probable growth inhibitor, PemK-like, autoregulated; toxin of the ChpB-ChpS toxin-antitoxin system 4449042 chpB 948747 chpB Escherichia coli str. K-12 substr. MG1655 toxin of the ChpB-ChpS toxin-antitoxin system NP_418646.1 4448692 D 511145 CDS NP_418647.1 16132048 948748 complement(4449122..4449652) 1 NC_000913.3 inorganic pyrophosphatase 4449652 ppa 948748 ppa Escherichia coli str. K-12 substr. MG1655 inorganic pyrophosphatase NP_418647.1 4449122 R 511145 CDS NP_418648.1 16132049 948746 4449962..4450918 1 NC_000913.3 putative LACI-type transcriptional regulator; galactofuranose binding proteint: periplasmic-binding component of ABC superfamily 4450918 ytfQ 948746 ytfQ Escherichia coli str. K-12 substr. MG1655 galactofuranose binding proteint: periplasmic-binding component of ABC superfamily NP_418648.1 4449962 D 511145 CDS YP_026286.1 49176475 2847725 4451058..4452560 1 NC_000913.3 putative sugar transport protein (ABC superfamily, atp_bind); putative ABC superfamily sugar transporter ATP-binding subunit 4452560 ytfR 2847725 ytfR Escherichia coli str. K-12 substr. MG1655 putative ABC superfamily sugar transporter ATP-binding subunit YP_026286.1 4451058 D 511145 CDS NP_418651.3 145698343 948743 4452571..4453596 1 NC_000913.3 putative transport system permease protein; inner membrane putative ABC superfamily sugar transporter permease 4453596 ytfT 948743 ytfT Escherichia coli str. K-12 substr. MG1655 inner membrane putative ABC superfamily sugar transporter permease NP_418651.3 4452571 D 511145 CDS NP_418652.2 90111710 948754 4453583..4454578 1 NC_000913.3 putative transport system permease protein; inner membrane putative ABC superfamily sugar transporter permease 4454578 yjfF 948754 yjfF Escherichia coli str. K-12 substr. MG1655 inner membrane putative ABC superfamily sugar transporter permease NP_418652.2 4453583 D 511145 CDS NP_418653.1 16132054 948753 complement(4454611..4455609) 1 NC_000913.3 fructose-1,6-bisphosphatase I 4455609 fbp 948753 fbp Escherichia coli str. K-12 substr. MG1655 fructose-1,6-bisphosphatase I NP_418653.1 4454611 R 511145 CDS NP_418654.1 16132055 948752 4455785..4457158 1 NC_000913.3 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 4457158 mpl 948752 mpl Escherichia coli str. K-12 substr. MG1655 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase NP_418654.1 4455785 D 511145 CDS NP_418655.1 16132056 948751 complement(4457314..4457865) 1 NC_000913.3 putative alpha helix protein; ribosome-associated UPF0307 family protein 4457865 yjgA 948751 yjgA Escherichia coli str. K-12 substr. MG1655 ribosome-associated UPF0307 family protein NP_418655.1 4457314 R 511145 CDS NP_418656.1 16132057 948750 4457959..4459311 1 NC_000913.3 maturation of antibiotic MccB17, see tld genes; putative antibiotic peptide MccB17 maturation peptidase 4459311 pmbA 948750 pmbA Escherichia coli str. K-12 substr. MG1655 putative antibiotic peptide MccB17 maturation peptidase NP_418656.1 4457959 D 511145 CDS b4236 948758 4459490..4459855 1 NC_000913.3 pseudogene, truncated cytochrome b562; cytochrome b(562); <NULL_VALUE> 4459855 cybC 948758 cybC Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 4459490 D 511145 CDS NP_418658.1 16132059 948757 complement(4459900..4460364) 1 NC_000913.3 anaerobic ribonucleotide reductase activating protein 4460364 nrdG 948757 nrdG Escherichia coli str. K-12 substr. MG1655 anaerobic ribonucleotide reductase activating protein NP_418658.1 4459900 R 511145 CDS NP_418659.1 16132060 948755 complement(4460522..4462660) 1 NC_000913.3 anaerobic ribonucleoside-triphosphate reductase 4462660 nrdD 948755 nrdD Escherichia coli str. K-12 substr. MG1655 anaerobic ribonucleoside-triphosphate reductase NP_418659.1 4460522 R 511145 CDS NP_418660.1 16132061 948762 complement(4463054..4464709) 1 NC_000913.3 trehalase 6-P hydrolase; trehalose-6-P hydrolase 4464709 treC 948762 treC Escherichia coli str. K-12 substr. MG1655 trehalose-6-P hydrolase NP_418660.1 4463054 R 511145 CDS NP_418661.1 16132062 948761 complement(4464759..4466180) 1 NC_000913.3 PTS system enzyme II, trehalose specific; fused trehalose(maltose)-specific PTS enzyme: IIB component/IIC component 4466180 treB 948761 treB Escherichia coli str. K-12 substr. MG1655 fused trehalose(maltose)-specific PTS enzyme: IIB component/IIC component NP_418661.1 4464759 R 511145 CDS NP_418662.1 16132063 948760 complement(4466299..4467246) 1 NC_000913.3 repressor of treA,B,C; trehalose 6-phosphate-inducible trehalose regulon transcriptional repressor 4467246 treR 948760 treR Escherichia coli str. K-12 substr. MG1655 trehalose 6-phosphate-inducible trehalose regulon transcriptional repressor NP_418662.1 4466299 R 511145 CDS YP_003933616.1 308209623 9797237 4467431..4467484 1 NC_000913.3 regulatory leader peptide for mgtA 4467484 mgtL 9797237 mgtL Escherichia coli str. K-12 substr. MG1655 regulatory leader peptide for mgtA YP_003933616.1 4467431 D 511145 CDS NP_418663.1 16132064 948778 4467625..4470321 1 NC_000913.3 Mg2+ transport ATPase, P-type 1; magnesium transporter 4470321 mgtA 948778 mgtA Escherichia coli str. K-12 substr. MG1655 magnesium transporter NP_418663.1 4467625 D 511145 CDS NP_418664.2 90111711 948771 complement(4470527..4470913) 1 NC_000913.3 enamine/imine deaminase, reaction intermediate detoxification 4470913 ridA 948771 ridA Escherichia coli str. K-12 substr. MG1655 enamine/imine deaminase, reaction intermediate detoxification NP_418664.2 4470527 R 511145 CDS NP_418665.1 16132066 948763 complement(4470986..4471447) 1 NC_000913.3 aspartate carbamoyltransferase, regulatory subunit 4471447 pyrI 948763 pyrI Escherichia coli str. K-12 substr. MG1655 aspartate carbamoyltransferase, regulatory subunit NP_418665.1 4470986 R 511145 CDS NP_418666.1 16132067 948767 complement(4471460..4472395) 1 NC_000913.3 aspartate carbamoyltransferase, catalytic subunit 4472395 pyrB 948767 pyrB Escherichia coli str. K-12 substr. MG1655 aspartate carbamoyltransferase, catalytic subunit NP_418666.1 4471460 R 511145 CDS NP_418667.1 16132068 948768 complement(4472399..4472533) 1 NC_000913.3 pyrBI operon leader peptide 4472533 pyrL 948768 pyrL Escherichia coli str. K-12 substr. MG1655 pyrBI operon leader peptide NP_418667.1 4472399 R 511145 CDS NP_418669.1 16132070 948769 complement(4472814..4473209) 1 NC_000913.3 UPF0131 family protein 4473209 yjgH 948769 yjgH Escherichia coli str. K-12 substr. MG1655 UPF0131 family protein NP_418669.1 4472814 R 511145 CDS NP_418670.1 16132071 948765 complement(4473340..4474053) 1 NC_000913.3 putative oxidoreductase; c-di-GMP-binding biofilm dispersal mediator protein 4474053 bdcA 948765 bdcA Escherichia coli str. K-12 substr. MG1655 c-di-GMP-binding biofilm dispersal mediator protein NP_418670.1 4473340 R 511145 CDS NP_418672.4 90111712 948775 4474124..4474717 1 NC_000913.3 transcriptional repressor for divergent bdcA 4474717 bdcR 948775 bdcR Escherichia coli str. K-12 substr. MG1655 transcriptional repressor for divergent bdcA NP_418672.4 4474124 D 511145 CDS NP_418673.4 90111713 948777 4474862..4475314 1 NC_000913.3 biofilm modulator regulated by toxins; DUF386 family protein, cupin superfamily 4475314 tabA 948777 tabA Escherichia coli str. K-12 substr. MG1655 biofilm modulator regulated by toxins; DUF386 family protein, cupin superfamily NP_418673.4 4474862 D 511145 CDS NP_418674.2 90111714 948776 4475437..4477251 1 NC_000913.3 uncharacterized protein 4477251 yjgL 948776 yjgL Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_418674.2 4475437 D 511145 CDS NP_418675.1 16132076 948774 complement(4477307..4478311) 1 NC_000913.3 ornithine carbamoyltransferase 1 4478311 argI 948774 argI Escherichia coli str. K-12 substr. MG1655 ornithine carbamoyltransferase 1 NP_418675.1 4477307 R 511145 CDS NP_418676.1 16132077 948773 4478473..4478889 1 NC_000913.3 protein inhibitor of RNase E 4478889 rraB 948773 rraB Escherichia coli str. K-12 substr. MG1655 protein inhibitor of RNase E NP_418676.1 4478473 D 511145 CDS YP_026287.1 49176479 948772 complement(4479034..4479537) 1 NC_000913.3 putative acyltransferase; putative acetyltransferase 4479537 yjgM 948772 yjgM Escherichia coli str. K-12 substr. MG1655 putative acetyltransferase YP_026287.1 4479034 R 511145 CDS YP_026288.1 49176480 948784 4479730..4480926 1 NC_000913.3 DUF898 family inner membrane protein 4480926 yjgN 948784 yjgN Escherichia coli str. K-12 substr. MG1655 DUF898 family inner membrane protein YP_026288.1 4479730 D 511145 CDS NP_418679.1 16132080 948785 complement(4480982..4483837) 1 NC_000913.3 valine tRNA synthetase; valyl-tRNA synthetase 4483837 valS 948785 valS Escherichia coli str. K-12 substr. MG1655 valyl-tRNA synthetase NP_418679.1 4480982 R 511145 CDS NP_418680.1 16132081 948787 complement(4483837..4484280) 1 NC_000913.3 DNA polymerase III, chi subunit 4484280 holC 948787 holC Escherichia coli str. K-12 substr. MG1655 DNA polymerase III, chi subunit NP_418680.1 4483837 R 511145 CDS NP_418681.1 16132082 948791 complement(4484440..4485951) 1 NC_000913.3 aminopeptidase A/I; multifunctional aminopeptidase A: a cyteinylglycinase, transcription regulator and site-specific recombination factor 4485951 pepA 948791 pepA Escherichia coli str. K-12 substr. MG1655 multifunctional aminopeptidase A: a cyteinylglycinase, transcription regulator and site-specific recombination factor NP_418681.1 4484440 R 511145 CDS NP_418682.1 16132083 948795 4486218..4487318 1 NC_000913.3 lipopolysaccharide export ABC permease of the LptBFGC export complex 4487318 lptF 948795 lptF Escherichia coli str. K-12 substr. MG1655 lipopolysaccharide export ABC permease of the LptBFGC export complex NP_418682.1 4486218 D 511145 CDS NP_418683.4 90111715 945324 4487318..4488400 1 NC_000913.3 lipopolysaccharide export ABC permease of the LptBFGC export complex 4488400 lptG 945324 lptG Escherichia coli str. K-12 substr. MG1655 lipopolysaccharide export ABC permease of the LptBFGC export complex NP_418683.4 4487318 D 511145 CDS NP_418684.1 16132085 948978 complement(4488561..4490063) 1 NC_000913.3 DUF853 family protein with NTPase fold 4490063 yjgR 948978 yjgR Escherichia coli str. K-12 substr. MG1655 DUF853 family protein with NTPase fold NP_418684.1 4488561 R 511145 CDS NP_418685.1 16132086 949058 complement(4490141..4491139) 1 NC_000913.3 transcriptional repressor, 5-gluconate-binding 4491139 idnR 949058 idnR Escherichia coli str. K-12 substr. MG1655 transcriptional repressor, 5-gluconate-binding NP_418685.1 4490141 R 511145 CDS NP_418686.1 16132087 948798 complement(4491206..4492525) 1 NC_000913.3 L-idonate and D-gluconate transporter 4492525 idnT 948798 idnT Escherichia coli str. K-12 substr. MG1655 L-idonate and D-gluconate transporter NP_418686.1 4491206 R 511145 CDS NP_418687.1 16132088 947109 complement(4492587..4493351) 1 NC_000913.3 5-keto-D-gluconate-5-reductase 4493351 idnO 947109 idnO Escherichia coli str. K-12 substr. MG1655 5-keto-D-gluconate-5-reductase NP_418687.1 4492587 R 511145 CDS NP_418688.1 16132089 944769 complement(4493375..4494406) 1 NC_000913.3 L-idonate 5-dehydrogenase, NAD-binding 4494406 idnD 944769 idnD Escherichia coli str. K-12 substr. MG1655 L-idonate 5-dehydrogenase, NAD-binding NP_418688.1 4493375 R 511145 CDS NP_418689.1 16132090 946066 4494623..4495186 1 NC_000913.3 D-gluconate kinase, thermosensitive 4495186 idnK 946066 idnK Escherichia coli str. K-12 substr. MG1655 D-gluconate kinase, thermosensitive NP_418689.1 4494623 D 511145 CDS NP_418690.4 90111716 948802 complement(4495190..4496209) 1 NC_000913.3 putative oxidoreductase; aldehyde reductase, NADPH-dependent, Zn-containing, broad specificity 4496209 ahr 948802 ahr Escherichia coli str. K-12 substr. MG1655 aldehyde reductase, NADPH-dependent, Zn-containing, broad specificity NP_418690.4 4495190 R 511145 CDS b4271 948782 4496675..4497940 1 NC_000913.3 pseudogene, integrase homology;IS, phage, Tn; Phage-related functions and prophages; KpLE2 phage-like element; P4-like integrase; <NULL_VALUE> 4497940 intB 948782 intB Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 4496675 D 511145 CDS NP_418692.2 145698344 948781 4498272..4498637 1 NC_000913.3 IS2 repressor TnpA 4498637 insC1 948781 insC1 Escherichia coli str. K-12 substr. MG1655 IS2 repressor TnpA NP_418692.2 4498272 D 511145 CDS NP_418693.1 16132094 948779 4498595..4499500 1 NC_000913.3 IS2 transposase TnpB 4499500 insD1 948779 insD1 Escherichia coli str. K-12 substr. MG1655 IS2 transposase TnpB NP_418693.1 4498595 D 511145 CDS b4575 4056033 complement(join(4499593..4500534,4500534..4500791)) 1 NC_000913.3 pseudogene fragment; <NULL_VALUE> 4500791 yjgX 4056033 yjgX Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 4499593 R 511145 CDS NP_418697.1 16132098 948804 4501260..4501589 1 NC_000913.3 uncharacterized protein 4501589 yjgZ 948804 yjgZ Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_418697.1 4501260 D 511145 CDS NP_418698.1 16132099 948805 complement(4502103..4503431) 1 NC_000913.3 IS4 transposase 4503431 insG 948805 insG Escherichia coli str. K-12 substr. MG1655 IS4 transposase NP_418698.1 4502103 R 511145 CDS NP_418699.4 90111718 948807 4504058..4505275 1 NC_000913.3 putative transport protein; putative transporter 4505275 yjhB 948807 yjhB Escherichia coli str. K-12 substr. MG1655 putative transporter NP_418699.4 4504058 D 511145 CDS NP_418700.2 90111719 948808 4505287..4506405 1 NC_000913.3 putative dehydrogenase; putative oxidoreductase 4506405 yjhC 948808 yjhC Escherichia coli str. K-12 substr. MG1655 putative oxidoreductase NP_418700.2 4505287 D 511145 CDS YP_001491548.1 157783151 5625581 4506448..4506573 1 NC_000913.3 uncharacterized protein 4506573 ythA 5625581 ythA Escherichia coli str. K-12 substr. MG1655 uncharacterized protein YP_001491548.1 4506448 D 511145 CDS b4281 948809 complement(4506626..4506856) 1 NC_000913.3 pseudogene, KpLE2 phage-like element; <NULL_VALUE> 4506856 yjhD 948809 yjhD Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 4506626 R 511145 CDS b4282 948810 4506861..4507109 1 NC_000913.3 pseudogene, KpLE2 phage-like element; <NULL_VALUE> 4507109 yjhE 948810 yjhE Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 4506861 D 511145 CDS b4623 5061531 join(4507197..4507451,4509009..4509793) 1 NC_000913.3 pseudogene, IS911 transposase B;IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related; <NULL_VALUE> 4509793 insO 5061531 insO Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 4507197 D 511145 CDS NP_418704.1 16132105 948815 complement(4507466..4508617) 1 NC_000913.3 IS30 transposase 4508617 insI1 948815 insI1 Escherichia coli str. K-12 substr. MG1655 IS30 transposase NP_418704.1 4507466 R 511145 CDS b4561 1450310 complement(4508676..4508942) 1 NC_000913.3 pseudogene, IS600 transposase;IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related; <NULL_VALUE> 4508942 insM 1450310 insM Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 4508676 R 511145 CDS b4286 948818 4509804..4510133 1 NC_000913.3 pseudogene, KpLE2 phage-like element; <NULL_VALUE> 4510133 yjhV 948818 yjhV Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 4509804 D 511145 CDS NP_418707.1 16132108 948819 complement(4510690..4511457) 1 NC_000913.3 ATP-binding component of citrate-dependent iron(III) transport protein; ATP-binding component of ABC superfamily; iron-dicitrate transporter subunit 4511457 fecE 948819 fecE Escherichia coli str. K-12 substr. MG1655 iron-dicitrate transporter subunit NP_418707.1 4510690 R 511145 CDS NP_418708.1 16132109 946816 complement(4511458..4512414) 1 NC_000913.3 citrate-dependent iron transport, membrane-bound protein; membrane component of ABC superfamily; iron-dicitrate transporter subunit 4512414 fecD 946816 fecD Escherichia coli str. K-12 substr. MG1655 iron-dicitrate transporter subunit NP_418708.1 4511458 R 511145 CDS NP_418709.1 16132110 948826 complement(4512411..4513409) 1 NC_000913.3 citrate-dependent iron(III) transport protein, cytosolic; membrane component of ABC superfamily; iron-dicitrate transporter subunit 4513409 fecC 948826 fecC Escherichia coli str. K-12 substr. MG1655 iron-dicitrate transporter subunit NP_418709.1 4512411 R 511145 CDS NP_418710.4 162135917 946838 complement(4513406..4514308) 1 NC_000913.3 citrate-dependent iron transport, periplasmic protein; periplasmic-binding component of ABC superfamily; iron-dicitrate transporter subunit 4514308 fecB 946838 fecB Escherichia coli str. K-12 substr. MG1655 iron-dicitrate transporter subunit NP_418710.4 4513406 R 511145 CDS NP_418711.1 16132112 946427 complement(4514353..4516677) 1 NC_000913.3 outer membrane receptor; citrate-dependent iron transport, outer membrane receptor; ferric citrate outer membrane transporter 4516677 fecA 946427 fecA Escherichia coli str. K-12 substr. MG1655 ferric citrate outer membrane transporter NP_418711.1 4514353 R 511145 CDS NP_418712.1 16132113 949104 complement(4516764..4517717) 1 NC_000913.3 regulator for fec operon, periplasmic; FecI pro-sigma factor; transmembrane signal transducer for ferric citrate transport; periplasmic FecA:ferric citrate sensor and cytoplasmic FecI ECF sigma factor activator 4517717 fecR 949104 fecR Escherichia coli str. K-12 substr. MG1655 FecI pro-sigma factor; transmembrane signal transducer for ferric citrate transport; periplasmic FecA:ferric citrate sensor and cytoplasmic FecI ECF sigma factor activator NP_418712.1 4516764 R 511145 CDS NP_418713.1 16132114 946839 complement(4517714..4518235) 1 NC_000913.3 probable RNA polymerase sigma factor; RNA polymerase, sigma 19 factor 4518235 fecI 946839 fecI Escherichia coli str. K-12 substr. MG1655 RNA polymerase, sigma 19 factor NP_418713.1 4517714 R 511145 CDS NP_418714.1 16132115 948830 4518527..4518802 1 NC_000913.3 IS1 repressor TnpA 4518802 insA 948830 insA Escherichia coli str. K-12 substr. MG1655 IS1 repressor TnpA NP_418714.1 4518527 D 511145 CDS b4576 4056034 4518721..4519224 1 NC_000913.3 IS1 transposase B;IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related; <NULL_VALUE> 4519224 insB1 4056034 insB1 Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 4518721 D 511145 CDS NP_418715.2 90111724 948827 complement(4519338..4520324) 1 NC_000913.3 putative DNA-binding transcriptional regulator; KpLE2 phage-like element 4520324 yjhU 948827 yjhU Escherichia coli str. K-12 substr. MG1655 putative DNA-binding transcriptional regulator; KpLE2 phage-like element NP_418715.2 4519338 R 511145 CDS NP_418716.1 16132117 949102 complement(4520671..4522020) 1 NC_000913.3 putative transport system permease; putative transporter 4522020 yjhF 949102 yjhF Escherichia coli str. K-12 substr. MG1655 putative transporter NP_418716.1 4520671 R 511145 CDS NP_418717.1 16132118 946829 complement(4522127..4524094) 1 NC_000913.3 putative dehydratase 4524094 yjhG 946829 yjhG Escherichia coli str. K-12 substr. MG1655 putative dehydratase NP_418717.1 4522127 R 511145 CDS NP_418718.4 90111725 948825 complement(4524105..4525010) 1 NC_000913.3 putative lyase/synthase 4525010 yjhH 948825 yjhH Escherichia coli str. K-12 substr. MG1655 putative lyase/synthase NP_418718.4 4524105 R 511145 CDS NP_418719.1 16132120 949100 complement(4525015..4525803) 1 NC_000913.3 putative regulator; putative DNA-binding transcriptional regulator 4525803 yjhI 949100 yjhI Escherichia coli str. K-12 substr. MG1655 putative DNA-binding transcriptional regulator NP_418719.1 4525015 R 511145 CDS NP_418720.1 16132121 946830 complement(4526106..4526888) 1 NC_000913.3 putative DEOR-type transcriptional regulator; putative DNA-binding transcriptional regulator 4526888 sgcR 946830 sgcR Escherichia coli str. K-12 substr. MG1655 putative DNA-binding transcriptional regulator NP_418720.1 4526106 R 511145 CDS NP_418721.1 16132122 948829 complement(4526905..4527537) 1 NC_000913.3 putative epimerase 4527537 sgcE 948829 sgcE Escherichia coli str. K-12 substr. MG1655 putative epimerase NP_418721.1 4526905 R 511145 CDS NP_418722.1 16132123 948831 complement(4527549..4527980) 1 NC_000913.3 putative PTS system enzyme II A component; putative phosphotransferase enzyme IIA component 4527980 sgcA 948831 sgcA Escherichia coli str. K-12 substr. MG1655 putative phosphotransferase enzyme IIA component NP_418722.1 4527549 R 511145 CDS NP_418723.1 16132124 948834 complement(4528111..4528917) 1 NC_000913.3 putative nucleoside triphosphatase 4528917 sgcQ 948834 sgcQ Escherichia coli str. K-12 substr. MG1655 putative nucleoside triphosphatase NP_418723.1 4528111 R 511145 CDS NP_418724.1 16132125 946849 complement(4528930..4530243) 1 NC_000913.3 putative PTS system enzyme IIC component; putative PTS system EIIC permease component 4530243 sgcC 946849 sgcC Escherichia coli str. K-12 substr. MG1655 putative PTS system EIIC permease component NP_418724.1 4528930 R 511145 CDS YP_588476.1 94541133 1450295 complement(4530255..4530533) 1 NC_000913.3 putative enzyme IIB component of PTS 4530533 sgcB 1450295 sgcB Escherichia coli str. K-12 substr. MG1655 putative enzyme IIB component of PTS YP_588476.1 4530255 R 511145 CDS NP_418725.4 90111726 948840 complement(4530530..4531651) 1 NC_000913.3 putative lyase/synthase; putative endoglucanase with Zn-dependent exopeptidase domain 4531651 sgcX 948840 sgcX Escherichia coli str. K-12 substr. MG1655 putative endoglucanase with Zn-dependent exopeptidase domain NP_418725.4 4530530 R 511145 CDS b4656 5625582 complement(4532050..4532310) 1 NC_000913.3 pseudogene, zinc finger protein family; <NULL_VALUE> 4532310 yjhY 5625582 yjhY Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 4532050 R 511145 CDS NP_418726.1 16132127 946851 complement(4532437..4533183) 1 NC_000913.3 putative methyltransferase 4533183 yjhP 946851 yjhP Escherichia coli str. K-12 substr. MG1655 putative methyltransferase NP_418726.1 4532437 R 511145 CDS NP_418727.1 16132128 949059 complement(4533239..4533784) 1 NC_000913.3 putative acetyltransferase 4533784 yjhQ 949059 yjhQ Escherichia coli str. K-12 substr. MG1655 putative acetyltransferase NP_418727.1 4533239 R 511145 CDS YP_588477.1 94541138 1450297 complement(4533796..4534053) 1 NC_000913.3 UPF0386 family protein 4534053 yjhX 1450297 yjhX Escherichia coli str. K-12 substr. MG1655 UPF0386 family protein YP_588477.1 4533796 R 511145 CDS b4657 5625583 complement(4534430..4534675) 1 NC_000913.3 pseudogene, rimK paralog, C-terminal fragment; <NULL_VALUE> 4534675 yjhZ 5625583 yjhZ Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 4534430 R 511145 CDS b4308 944740 join(4534791..4535003,4535003..4536031) 1 NC_000913.3 pseudogene, helicase family; putative frameshift suppressor; <NULL_VALUE> 4536031 yjhR 944740 yjhR Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 4534791 D 511145 CDS NP_418729.1 16132130 948835 complement(4536614..4537594) 1 NC_000913.3 9-O-acetyl N-acetylneuraminic acid esterase 4537594 nanS 948835 nanS Escherichia coli str. K-12 substr. MG1655 9-O-acetyl N-acetylneuraminic acid esterase NP_418729.1 4536614 R 511145 CDS NP_418730.4 90111727 949106 complement(4537659..4538765) 1 NC_000913.3 N-acetylneuraminic acid mutarotase 4538765 nanM 949106 nanM Escherichia coli str. K-12 substr. MG1655 N-acetylneuraminic acid mutarotase NP_418730.4 4537659 R 511145 CDS NP_418731.2 90111728 946843 complement(4538785..4539501) 1 NC_000913.3 N-acetylnuraminic acid outer membrane channel protein 4539501 nanC 946843 nanC Escherichia coli str. K-12 substr. MG1655 N-acetylnuraminic acid outer membrane channel protein NP_418731.2 4538785 R 511145 CDS NP_418732.1 16132133 948832 4540957..4541559 1 NC_000913.3 recombinase involved in phase variation; regulator for fimA; tyrosine recombinase/inversion of on/off regulator of fimA 4541559 fimB 948832 fimB Escherichia coli str. K-12 substr. MG1655 tyrosine recombinase/inversion of on/off regulator of fimA NP_418732.1 4540957 D 511145 CDS NP_418733.1 16132134 948836 4542037..4542633 1 NC_000913.3 recombinase involved in phase variation; regulator for fimA; tyrosine recombinase/inversion of on/off regulator of fimA 4542633 fimE 948836 fimE Escherichia coli str. K-12 substr. MG1655 tyrosine recombinase/inversion of on/off regulator of fimA NP_418733.1 4542037 D 511145 CDS NP_418734.1 16132135 948838 4543115..4543663 1 NC_000913.3 major type 1 subunit fimbrin (pilin) 4543663 fimA 948838 fimA Escherichia coli str. K-12 substr. MG1655 major type 1 subunit fimbrin (pilin) NP_418734.1 4543115 D 511145 CDS NP_418735.2 90111729 948841 4543728..4544267 1 NC_000913.3 fimbrial protein; fimbrial protein involved in type 1 pilus biosynthesis 4544267 fimI 948841 fimI Escherichia coli str. K-12 substr. MG1655 fimbrial protein involved in type 1 pilus biosynthesis NP_418735.2 4543728 D 511145 CDS NP_418736.3 49176488 948843 4544304..4545029 1 NC_000913.3 periplasmic chaperone, required for type 1 fimbriae; periplasmic chaperone 4545029 fimC 948843 fimC Escherichia coli str. K-12 substr. MG1655 periplasmic chaperone NP_418736.3 4544304 D 511145 CDS NP_418737.1 16132138 948844 4545096..4547732 1 NC_000913.3 outer membrane protein; export and assembly of type 1 fimbriae, interrupted; fimbrial usher outer membrane porin protein; FimCD chaperone-usher 4547732 fimD 948844 fimD Escherichia coli str. K-12 substr. MG1655 fimbrial usher outer membrane porin protein; FimCD chaperone-usher NP_418737.1 4545096 D 511145 CDS NP_418738.1 16132139 948845 4547742..4548272 1 NC_000913.3 fimbrial morphology; minor component of type 1 fimbriae 4548272 fimF 948845 fimF Escherichia coli str. K-12 substr. MG1655 minor component of type 1 fimbriae NP_418738.1 4547742 D 511145 CDS NP_418739.1 16132140 948846 4548285..4548788 1 NC_000913.3 fimbrial morphology; minor component of type 1 fimbriae 4548788 fimG 948846 fimG Escherichia coli str. K-12 substr. MG1655 minor component of type 1 fimbriae NP_418739.1 4548285 D 511145 CDS NP_418740.1 16132141 948847 4548808..4549710 1 NC_000913.3 minor fimbrial subunit, D-mannose specific adhesin; minor component of type 1 fimbriae 4549710 fimH 948847 fimH Escherichia coli str. K-12 substr. MG1655 minor component of type 1 fimbriae NP_418740.1 4548808 D 511145 CDS NP_418741.1 16132142 948848 complement(4549953..4551296) 1 NC_000913.3 gluconate transport system permease 3; fructuronate transporter 4551296 gntP 948848 gntP Escherichia coli str. K-12 substr. MG1655 fructuronate transporter NP_418741.1 4549953 R 511145 CDS NP_418742.1 16132143 947082 4551636..4552820 1 NC_000913.3 mannonate hydrolase 4552820 uxuA 947082 uxuA Escherichia coli str. K-12 substr. MG1655 mannonate hydrolase NP_418742.1 4551636 D 511145 CDS NP_418743.1 16132144 946795 4552901..4554361 1 NC_000913.3 D-mannonate oxidoreductase; D-mannonate oxidoreductase, NAD-dependent 4554361 uxuB 946795 uxuB Escherichia coli str. K-12 substr. MG1655 D-mannonate oxidoreductase, NAD-dependent NP_418743.1 4552901 D 511145 CDS NP_418744.1 16132145 948849 4554576..4555349 1 NC_000913.3 regulator for uxu operon; fructuronate-inducible hexuronate regulon transcriptional repressor; autorepressor 4555349 uxuR 948849 uxuR Escherichia coli str. K-12 substr. MG1655 fructuronate-inducible hexuronate regulon transcriptional repressor; autorepressor NP_418744.1 4554576 D 511145 CDS NP_418745.3 49176489 948850 complement(4555490..4556320) 1 NC_000913.3 uncharacterized protein 4556320 yjiC 948850 yjiC Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_418745.3 4555490 R 511145 CDS NP_418746.4 90111730 948851 4556993..4557385 1 NC_000913.3 RpoS stabilzer after DNA damage, anti-RssB factor 4557385 iraD 948851 iraD Escherichia coli str. K-12 substr. MG1655 RpoS stabilzer after DNA damage, anti-RssB factor NP_418746.4 4556993 D 511145 CDS NP_418747.1 16132148 948852 complement(4557378..4558289) 1 NC_000913.3 putative transcriptional regulator LYSR-type; hypochlorite-responsive transcription factor 4558289 hypT 948852 hypT Escherichia coli str. K-12 substr. MG1655 hypochlorite-responsive transcription factor NP_418747.1 4557378 R 511145 CDS NP_418748.1 16132149 948853 complement(4558354..4559526) 1 NC_000913.3 isoaspartyl dipeptidase 4559526 iadA 948853 iadA Escherichia coli str. K-12 substr. MG1655 isoaspartyl dipeptidase NP_418748.1 4558354 R 511145 CDS NP_418749.1 16132150 948854 complement(4559539..4560000) 1 NC_000913.3 SpmB family inner membrane protein 4560000 yjiG 948854 yjiG Escherichia coli str. K-12 substr. MG1655 SpmB family inner membrane protein NP_418749.1 4559539 R 511145 CDS NP_418750.2 90111731 948856 complement(4559997..4560680) 1 NC_000913.3 nucleoside recognition pore and gate family putative inner membrane transporter 4560680 yjiH 948856 yjiH Escherichia coli str. K-12 substr. MG1655 nucleoside recognition pore and gate family putative inner membrane transporter NP_418750.2 4559997 R 511145 CDS NP_418751.4 90111732 948858 4560930..4561484 1 NC_000913.3 RNA 2'-phosphotransferase 4561484 kptA 948858 kptA Escherichia coli str. K-12 substr. MG1655 RNA 2'-phosphotransferase NP_418751.4 4560930 D 511145 CDS NP_418752.1 16132153 948859 complement(4561497..4562675) 1 NC_000913.3 putative transport protein; DUF1228 family putative inner membrane MFS superfamily transporter 4562675 yjiJ 948859 yjiJ Escherichia coli str. K-12 substr. MG1655 DUF1228 family putative inner membrane MFS superfamily transporter NP_418752.1 4561497 R 511145 CDS NP_418753.3 145698345 948957 complement(4562743..4563603) 1 NC_000913.3 SdiA-regulated family putative membrane-anchored protein; putative phytase-like esterase 4563603 yjiK 948957 yjiK Escherichia coli str. K-12 substr. MG1655 SdiA-regulated family putative membrane-anchored protein; putative phytase-like esterase NP_418753.3 4562743 R 511145 CDS NP_418754.2 90111734 948837 complement(4563922..4564689) 1 NC_000913.3 putative enzyme; putative ATPase, activator of (R)-hydroxyglutaryl-CoA dehydratase 4564689 yjiL 948837 yjiL Escherichia coli str. K-12 substr. MG1655 putative ATPase, activator of (R)-hydroxyglutaryl-CoA dehydratase NP_418754.2 4563922 R 511145 CDS NP_418755.4 90111735 945789 complement(4564699..4565850) 1 NC_000913.3 putative 2-hydroxyglutaryl-CoA dehydratase 4565850 yjiM 945789 yjiM Escherichia coli str. K-12 substr. MG1655 putative 2-hydroxyglutaryl-CoA dehydratase NP_418755.4 4564699 R 511145 CDS NP_418756.1 16132157 948860 complement(4565966..4567246) 1 NC_000913.3 zinc-type alcohol dehydrogenase-like protein 4567246 yjiN 948860 yjiN Escherichia coli str. K-12 substr. MG1655 zinc-type alcohol dehydrogenase-like protein NP_418756.1 4565966 R 511145 CDS NP_418757.1 16132158 948861 complement(4567287..4568519) 1 NC_000913.3 putative transport protein; multidrug efflux system protein 4568519 mdtM 948861 mdtM Escherichia coli str. K-12 substr. MG1655 multidrug efflux system protein NP_418757.1 4567287 R 511145 CDS b4339 948866 4568998..4569918 1 NC_000913.3 pseudogene, transposase_31 family protein; <NULL_VALUE> 4569918 yjiP 948866 yjiP Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 4568998 D 511145 CDS NP_418760.1 16132161 949089 complement(4570162..4571574) 1 NC_000913.3 putative regulator; putative DNA-binding transcriptional regulator/putative aminotransferase 4571574 yjiR 949089 yjiR Escherichia coli str. K-12 substr. MG1655 putative DNA-binding transcriptional regulator/putative aminotransferase NP_418760.1 4570162 R 511145 CDS NP_418761.1 16132162 948903 4571751..4571915 1 NC_000913.3 DUF1127 family protein 4571915 yjiS 948903 yjiS Escherichia coli str. K-12 substr. MG1655 DUF1127 family protein NP_418761.1 4571751 D 511145 CDS b4342 945056 4572414..4573916 1 NC_000913.3 pseudogene; <NULL_VALUE> 4573916 yjiT 945056 yjiT Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 4572414 D 511145 CDS b4486 2847669 4573919..4576855 1 NC_000913.3 pseudogene; conserved hypothetical protein; <NULL_VALUE> 4576855 yjiV 2847669 yjiV Escherichia coli str. K-12 substr. MG1655 <NULL_VALUE> <NULL_VALUE> 4573919 D 511145 CDS NP_418765.1 16132166 948880 complement(4576912..4577958) 1 NC_000913.3 component of McrBC 5-methylcytosine restriction system, expands range of sequences restricted; 5-methylcytosine-specific restriction enzyme McrBC, subunit McrC 4577958 mcrC 948880 mcrC Escherichia coli str. K-12 substr. MG1655 5-methylcytosine-specific restriction enzyme McrBC, subunit McrC NP_418765.1 4576912 R 511145 CDS NP_418766.4 90111737 949122 complement(4577958..4579337) 1 NC_000913.3 component of McrBC 5-methylcytosine restriction system; 5-methylcytosine-specific restriction enzyme McrBC, subunit McrB 4579337 mcrB 949122 mcrB Escherichia coli str. K-12 substr. MG1655 5-methylcytosine-specific restriction enzyme McrBC, subunit McrB NP_418766.4 4577958 R 511145 CDS NP_418767.4 145698346 949088 complement(4579499..4579840) 1 NC_000913.3 toxic peptide regulated by antisense sRNA symR 4579840 symE 949088 symE Escherichia coli str. K-12 substr. MG1655 toxic peptide regulated by antisense sRNA symR NP_418767.4 4579499 R 511145 CDS NP_418768.1 16132169 948867 complement(4580068..4581462) 1 NC_000913.3 specificity determinant for hsdM and hsdR 4581462 hsdS 948867 hsdS Escherichia coli str. K-12 substr. MG1655 specificity determinant for hsdM and hsdR NP_418768.1 4580068 R 511145 CDS NP_418769.1 16132170 948872 complement(4581459..4583048) 1 NC_000913.3 host modification; DNA methylase M; DNA methyltransferase M 4583048 hsdM 948872 hsdM Escherichia coli str. K-12 substr. MG1655 DNA methyltransferase M NP_418769.1 4581459 R 511145 CDS NP_418770.2 226524764 948878 complement(4583249..4586761) 1 NC_000913.3 host restriction; endonuclease R; endonuclease R Type I restriction enzyme 4586761 hsdR 948878 hsdR Escherichia coli str. K-12 substr. MG1655 endonuclease R Type I restriction enzyme NP_418770.2 4583249 R 511145 CDS NP_418771.1 16132172 948898 4586949..4587863 1 NC_000913.3 restriction of methylated adenine; methylated adenine and cytosine restriction protein 4587863 mrr 948898 mrr Escherichia coli str. K-12 substr. MG1655 methylated adenine and cytosine restriction protein NP_418771.1 4586949 D 511145 CDS NP_418772.4 90111738 948882 complement(4587909..4588865) 1 NC_000913.3 GTP-binding protein, putative GTPase 4588865 yjiA 948882 yjiA Escherichia coli str. K-12 substr. MG1655 GTP-binding protein, putative GTPase NP_418772.4 4587909 R 511145 CDS NP_418773.1 16132174 949090 complement(4588876..4589079) 1 NC_000913.3 DUF466 family protein 4589079 yjiX 949090 yjiX Escherichia coli str. K-12 substr. MG1655 DUF466 family protein NP_418773.1 4588876 R 511145 CDS NP_418774.2 90111739 948914 complement(4589129..4591279) 1 NC_000913.3 putative carbon starvation protein; putative transporter 4591279 yjiY 948914 yjiY Escherichia coli str. K-12 substr. MG1655 putative transporter NP_418774.2 4589129 R 511145 CDS NP_418775.1 16132176 948884 4591657..4593312 1 NC_000913.3 methyl-accepting chemotaxis protein I, serine sensor receptor 4593312 tsr 948884 tsr Escherichia coli str. K-12 substr. MG1655 methyl-accepting chemotaxis protein I, serine sensor receptor NP_418775.1 4591657 D 511145 CDS NP_418776.1 16132177 948879 complement(4593361..4594722) 1 NC_000913.3 putative transport protein, cryptic, orf, joins former yjiZ and yjjL; L-galactonate transporter 4594722 yjjL 948879 yjjL Escherichia coli str. K-12 substr. MG1655 L-galactonate transporter NP_418776.1 4593361 R 511145 CDS YP_026290.1 49176497 948881 complement(4594937..4595851) 1 NC_000913.3 yjjMN operon transcriptional activator 4595851 yjjM 948881 yjjM Escherichia coli str. K-12 substr. MG1655 yjjMN operon transcriptional activator YP_026290.1 4594937 R 511145 CDS NP_418778.4 226524765 948883 4595990..4597012 1 NC_000913.3 putative oxidoreductase; L-galactonate oxidoreductase 4597012 yjjN 948883 yjjN Escherichia coli str. K-12 substr. MG1655 L-galactonate oxidoreductase NP_418778.4 4595990 D 511145 CDS NP_418779.2 90111741 948888 complement(4597150..4599441) 1 NC_000913.3 phosphoglycerol transferases I and II 4599441 opgB 948888 opgB Escherichia coli str. K-12 substr. MG1655 phosphoglycerol transferases I and II NP_418779.2 4597150 R 511145 CDS NP_418780.2 90111742 948887 complement(4599695..4600189) 1 NC_000913.3 putative glycoprotein/receptor; putative DUF2501 family periplasmic protein 4600189 yjjA 948887 yjjA Escherichia coli str. K-12 substr. MG1655 putative DUF2501 family periplasmic protein NP_418780.2 4599695 R 511145 CDS NP_418781.1 16132182 948864 complement(4600238..4600975) 1 NC_000913.3 chromosome replication; initiation and chain elongation; DNA biosynthesis protein 4600975 dnaC 948864 dnaC Escherichia coli str. K-12 substr. MG1655 DNA biosynthesis protein NP_418781.1 4600238 R 511145 CDS NP_418782.1 16132183 948813 complement(4600978..4601517) 1 NC_000913.3 DNA biosynthesis; primosomal protein i; DNA biosynthesis protein (primosomal protein I) 4601517 dnaT 948813 dnaT Escherichia coli str. K-12 substr. MG1655 DNA biosynthesis protein (primosomal protein I) NP_418782.1 4600978 R 511145 CDS NP_418783.2 145698348 948811 complement(4601624..4602097) 1 NC_000913.3 DUF3815 family inner membrane protein 4602097 yjjB 948811 yjjB Escherichia coli str. K-12 substr. MG1655 DUF3815 family inner membrane protein NP_418783.2 4601624 R 511145 CDS NP_418784.4 90111743 948812 complement(4602088..4602858) 1 NC_000913.3 putative structural protein; DUF1212 family inner membrane protein 4602858 yjjP 948812 yjjP Escherichia coli str. K-12 substr. MG1655 DUF1212 family inner membrane protein NP_418784.4 4602088 R 511145 CDS NP_418785.1 16132186 948896 4603477..4604202 1 NC_000913.3 putative regulator; putative transcriptional regulator 4604202 yjjQ 948896 yjjQ Escherichia coli str. K-12 substr. MG1655 putative transcriptional regulator NP_418785.1 4603477 D 511145 CDS NP_418786.4 345452726 948889 4604160..4604837 1 NC_000913.3 2-component transcriptional regulator; bgl operon transcriptional activator 4604837 bglJ 948889 bglJ Escherichia coli str. K-12 substr. MG1655 bgl operon transcriptional activator NP_418786.4 4604160 D 511145 CDS NP_418787.1 16132188 948891 complement(4604875..4605663) 1 NC_000913.3 ferric iron reductase involved in ferric hydroximate transport 4605663 fhuF 948891 fhuF Escherichia coli str. K-12 substr. MG1655 ferric iron reductase involved in ferric hydroximate transport NP_418787.1 4604875 R 511145 CDS YP_588478.1 94541134 1450313 4605804..4606040 1 NC_000913.3 uncharacterized protein 4606040 yjjZ 1450313 yjjZ Escherichia coli str. K-12 substr. MG1655 uncharacterized protein YP_588478.1 4605804 D 511145 CDS NP_418788.1 16132189 948892 complement(4606669..4607700) 1 NC_000913.3 16S rRNA m(2)G1207 methyltransferase, SAM-dependent 4607700 rsmC 948892 rsmC Escherichia coli str. K-12 substr. MG1655 16S rRNA m(2)G1207 methyltransferase, SAM-dependent NP_418788.1 4606669 R 511145 CDS NP_418789.1 16132190 948890 4607803..4608216 1 NC_000913.3 DNA polymerase III, psi subunit 4608216 holD 948890 holD Escherichia coli str. K-12 substr. MG1655 DNA polymerase III, psi subunit NP_418789.1 4607803 D 511145 CDS NP_418790.1 16132191 948894 4608185..4608631 1 NC_000913.3 acyltransferase for 30S ribosomal subunit protein S18; acetylation of N-terminal alanine; ribosomal-protein-S18-alanine N-acetyltransferase 4608631 rimI 948894 rimI Escherichia coli str. K-12 substr. MG1655 ribosomal-protein-S18-alanine N-acetyltransferase NP_418790.1 4608185 D 511145 CDS NP_418791.1 16132192 948899 4608646..4609323 1 NC_000913.3 putative phosphatase; dUMP phosphatase 4609323 yjjG 948899 yjjG Escherichia coli str. K-12 substr. MG1655 dUMP phosphatase NP_418791.1 4608646 D 511145 CDS NP_418792.1 16132193 948897 4609414..4611003 1 NC_000913.3 peptide chain release factor RF-3 4611003 prfC 948897 prfC Escherichia coli str. K-12 substr. MG1655 peptide chain release factor RF-3 NP_418792.1 4609414 D 511145 CDS NP_418793.1 16132194 948895 4611396..4612001 1 NC_000913.3 hyperosmotically inducible periplasmic protein; periplasmic protein 4612001 osmY 948895 osmY Escherichia coli str. K-12 substr. MG1655 periplasmic protein NP_418793.1 4611396 D 511145 CDS YP_588479.2 145698350 1450298 4612128..4612289 1 NC_000913.3 uncharacterized protein 4612289 ytjA 1450298 ytjA Escherichia coli str. K-12 substr. MG1655 uncharacterized protein YP_588479.2 4612128 D 511145 CDS NP_418794.1 16132195 948906 4612411..4613484 1 NC_000913.3 putative patatin-like family phospholipase 4613484 yjjU 948906 yjjU Escherichia coli str. K-12 substr. MG1655 putative patatin-like family phospholipase NP_418794.1 4612411 D 511145 CDS YP_026291.2 90111745 2847741 4613481..4614260 1 NC_000913.3 putative DNase 4614260 yjjV 2847741 yjjV Escherichia coli str. K-12 substr. MG1655 putative DNase YP_026291.2 4613481 D 511145 CDS NP_418796.1 16132196 948905 complement(4614680..4615543) 1 NC_000913.3 putative activating enzyme; putative pyruvate formate lyase activating enzyme 4615543 yjjW 948905 yjjW Escherichia coli str. K-12 substr. MG1655 putative pyruvate formate lyase activating enzyme NP_418796.1 4614680 R 511145 CDS NP_418797.1 16132197 948904 complement(4615515..4617065) 1 NC_000913.3 DUF3029 family protein, putative glycine radical enzyme 4617065 yjjI 948904 yjjI Escherichia coli str. K-12 substr. MG1655 DUF3029 family protein, putative glycine radical enzyme NP_418797.1 4615515 R 511145 CDS NP_418798.1 16132198 948902 4617323..4618102 1 NC_000913.3 2-deoxyribose-5-phosphate aldolase; 2-deoxyribose-5-phosphate aldolase, NAD(P)-linked 4618102 deoC 948902 deoC Escherichia coli str. K-12 substr. MG1655 2-deoxyribose-5-phosphate aldolase, NAD(P)-linked NP_418798.1 4617323 D 511145 CDS NP_418799.1 16132199 948901 4618229..4619551 1 NC_000913.3 thymidine phosphorylase 4619551 deoA 948901 deoA Escherichia coli str. K-12 substr. MG1655 thymidine phosphorylase NP_418799.1 4618229 D 511145 CDS NP_418800.1 16132200 948910 4619603..4620826 1 NC_000913.3 phosphopentomutase 4620826 deoB 948910 deoB Escherichia coli str. K-12 substr. MG1655 phosphopentomutase NP_418800.1 4619603 D 511145 CDS NP_418801.1 16132201 945654 4620883..4621602 1 NC_000913.3 purine-nucleoside phosphorylase 4621602 deoD 945654 deoD Escherichia coli str. K-12 substr. MG1655 purine-nucleoside phosphorylase NP_418801.1 4620883 D 511145 CDS NP_418802.1 16132202 944883 4621769..4623100 1 NC_000913.3 putative protein kinase 4623100 yjjJ 944883 yjjJ Escherichia coli str. K-12 substr. MG1655 putative protein kinase NP_418802.1 4621769 D 511145 CDS NP_418803.1 16132203 944865 complement(4623101..4624117) 1 NC_000913.3 lipoate-protein ligase A 4624117 lplA 944865 lplA Escherichia coli str. K-12 substr. MG1655 lipoate-protein ligase A NP_418803.1 4623101 R 511145 CDS NP_418804.1 16132204 946089 complement(4624145..4624789) 1 NC_000913.3 SMP_2 family putative membrane-anchored periplasmic protein 4624789 ytjB 946089 ytjB Escherichia coli str. K-12 substr. MG1655 SMP_2 family putative membrane-anchored periplasmic protein NP_418804.1 4624145 R 511145 CDS NP_418805.1 16132205 948913 4624895..4625863 1 NC_000913.3 3-phosphoserine phosphatase 4625863 serB 948913 serB Escherichia coli str. K-12 substr. MG1655 3-phosphoserine phosphatase NP_418805.1 4624895 D 511145 CDS NP_418806.1 16132206 948912 4625912..4627294 1 NC_000913.3 probable ATP-dependent protease; DNA repair protein 4627294 radA 948912 radA Escherichia coli str. K-12 substr. MG1655 DNA repair protein NP_418806.1 4625912 D 511145 CDS NP_418807.4 90111746 948911 4627315..4628547 1 NC_000913.3 probable nadAB transcriptional regulator; trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor 4628547 nadR 948911 nadR Escherichia coli str. K-12 substr. MG1655 trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor NP_418807.4 4627315 D 511145 CDS NP_418808.1 16132208 948909 complement(4628855..4630522) 1 NC_000913.3 putative ATP-binding component of a transport system; putative transporter subunit of ABC superfamily: ATP-binding component 4630522 yjjK 948909 yjjK Escherichia coli str. K-12 substr. MG1655 putative transporter subunit of ABC superfamily: ATP-binding component NP_418808.1 4628855 R 511145 CDS NP_418809.4 90111747 948908 4630733..4632670 1 NC_000913.3 soluble lytic murein transglycosylase; lytic murein transglycosylase, soluble 4632670 slt 948908 slt Escherichia coli str. K-12 substr. MG1655 lytic murein transglycosylase, soluble NP_418809.4 4630733 D 511145 CDS NP_418810.1 16132210 948917 4632760..4633086 1 NC_000913.3 regulator for trp operon and aroH; trp aporepressor; transcriptional repressor, tryptophan-binding 4633086 trpR 948917 trpR Escherichia coli str. K-12 substr. MG1655 transcriptional repressor, tryptophan-binding NP_418810.1 4632760 D 511145 CDS NP_418811.2 90111748 948919 complement(4633233..4633745) 1 NC_000913.3 non-canonical purine NTP phosphatase, ITPase/XTPase 4633745 yjjX 948919 yjjX Escherichia coli str. K-12 substr. MG1655 non-canonical purine NTP phosphatase, ITPase/XTPase NP_418811.2 4633233 R 511145 CDS NP_418812.1 16132212 948918 4633797..4634444 1 NC_000913.3 phosphoglyceromutase 2; phosphatase 4634444 ytjC 948918 ytjC Escherichia coli str. K-12 substr. MG1655 phosphatase NP_418812.1 4633797 D 511145 CDS NP_418813.1 16132213 948916 complement(4634441..4635310) 1 NC_000913.3 right origin-binding protein; right oriC-binding transcriptional activator, AraC family 4635310 rob 948916 rob Escherichia coli str. K-12 substr. MG1655 right oriC-binding transcriptional activator, AraC family NP_418813.1 4634441 R 511145 CDS NP_418814.1 16132214 948920 4635521..4635994 1 NC_000913.3 putative periplasmic protein 4635994 creA 948920 creA Escherichia coli str. K-12 substr. MG1655 putative periplasmic protein NP_418814.1 4635521 D 511145 CDS NP_418815.1 16132215 948922 4636007..4636696 1 NC_000913.3 catabolic regulation response regulator; response regulator in two-component regulatory system with CreC 4636696 creB 948922 creB Escherichia coli str. K-12 substr. MG1655 response regulator in two-component regulatory system with CreC NP_418815.1 4636007 D 511145 CDS NP_418816.1 16132216 948609 4636696..4638120 1 NC_000913.3 catabolite repression sensor kinase for PhoB; alternative sensor for pho regulon; sensory histidine kinase in two-component regulatory system with CreB or PhoB, regulator of the CreBC regulon 4638120 creC 948609 creC Escherichia coli str. K-12 substr. MG1655 sensory histidine kinase in two-component regulatory system with CreB or PhoB, regulator of the CreBC regulon NP_418816.1 4636696 D 511145 CDS NP_418817.1 16132217 948868 4638178..4639530 1 NC_000913.3 tolerance to colicin E2; inner membrane protein 4639530 creD 948868 creD Escherichia coli str. K-12 substr. MG1655 inner membrane protein NP_418817.1 4638178 D 511145 CDS NP_418818.1 16132218 948874 complement(4639590..4640306) 1 NC_000913.3 negative response regulator of genes in aerobic pathways, (sensors, ArcB and CpxA); response regulator in two-component regulatory system with ArcB or CpxA 4640306 arcA 948874 arcA Escherichia coli str. K-12 substr. MG1655 response regulator in two-component regulatory system with ArcB or CpxA NP_418818.1 4639590 R 511145 CDS NP_418819.1 16132219 948925 4640402..4640542 1 NC_000913.3 uncharacterized protein 4640542 yjjY 948925 yjjY Escherichia coli str. K-12 substr. MG1655 uncharacterized protein NP_418819.1 4640402 D 511145 CDS NP_418820.1 16132220 948924 4640942..4641628 1 NC_000913.3 putative methyltransferase 4641628 yjtD 948924 yjtD Escherichia coli str. K-12 substr. MG1655 putative methyltransferase NP_418820.1 4640942 D 511145 CDS