-- dump date 20180126_002619 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 511145000001 SEQ_END SEQ_END NC_000913.3 4641652 4641652 DR NC_000913.3; contig end 4641652..4641652 Escherichia coli str. K-12 substr. MG1655 <NA> b0001 CDS thrL NC_000913.3 190 255 D thr operon leader peptide 190..255 Escherichia coli str. K-12 substr. MG1655 944742 b0002 CDS thrA NC_000913.3 337 2799 D bifunctional: aspartokinase I (N-terminal); homoserine dehydrogenase I (C-terminal); Bifunctional aspartokinase/homoserine dehydrogenase 1 337..2799 Escherichia coli str. K-12 substr. MG1655 945803 b0003 CDS thrB NC_000913.3 2801 3733 D homoserine kinase 2801..3733 Escherichia coli str. K-12 substr. MG1655 947498 b0004 CDS thrC NC_000913.3 3734 5020 D L-threonine synthase 3734..5020 Escherichia coli str. K-12 substr. MG1655 945198 b0005 CDS yaaX NC_000913.3 5234 5530 D DUF2502 family putative periplasmic protein 5234..5530 Escherichia coli str. K-12 substr. MG1655 944747 b0006 CDS yaaA NC_000913.3 5683 6459 R peroxide resistance protein, lowers intracellular iron complement(5683..6459) Escherichia coli str. K-12 substr. MG1655 944749 b0007 CDS yaaJ NC_000913.3 6529 7959 R inner membrane transport protein; putative transporter complement(6529..7959) Escherichia coli str. K-12 substr. MG1655 944745 b0008 CDS talB NC_000913.3 8238 9191 D transaldolase B 8238..9191 Escherichia coli str. K-12 substr. MG1655 944748 b0009 CDS mog NC_000913.3 9306 9893 D putative molybdochetalase in molybdopterine biosynthesis; molybdochelatase incorporating molybdenum into molybdopterin 9306..9893 Escherichia coli str. K-12 substr. MG1655 944760 b0010 CDS satP NC_000913.3 9928 10494 R succinate-acetate transporter complement(9928..10494) Escherichia coli str. K-12 substr. MG1655 944792 b0011 CDS yaaW NC_000913.3 10643 11356 R UPF0174 family protein complement(10643..11356) Escherichia coli str. K-12 substr. MG1655 944771 b0013 CDS yaaI NC_000913.3 11382 11786 R UPF0412 family protein complement(11382..11786) Escherichia coli str. K-12 substr. MG1655 944751 b0014 CDS dnaK NC_000913.3 12163 14079 D chaperone Hsp70; DNA biosynthesis; autoregulated heat shock proteins; chaperone Hsp70, with co-chaperone DnaJ 12163..14079 Escherichia coli str. K-12 substr. MG1655 944750 b0015 CDS dnaJ NC_000913.3 14168 15298 D chaperone with DnaK; heat shock protein; chaperone Hsp40, DnaK co-chaperone 14168..15298 Escherichia coli str. K-12 substr. MG1655 944753 b0016 CDS insL1 NC_000913.3 15445 16557 D IS186 transposase 15445..16557 Escherichia coli str. K-12 substr. MG1655 944754 b0018 CDS mokC NC_000913.3 16751 16960 R regulatory peptide whose translation enables hokC (gef) expression; completely contained in another CDS; regulatory protein for HokC, overlaps CDS of hokC complement(16751..16960) Escherichia coli str. K-12 substr. MG1655 944756 b4412 CDS hokC NC_000913.3 16751 16903 R small toxic membrane polypeptide; completely contained in another CDS; toxic membrane protein, small complement(16751..16903) Escherichia coli str. K-12 substr. MG1655 2847744 b0019 CDS nhaA NC_000913.3 17489 18655 D Na+/H antiporter, pH dependent; sodium-proton antiporter 17489..18655 Escherichia coli str. K-12 substr. MG1655 944758 b0020 CDS nhaR NC_000913.3 18715 19620 D transcriptional activator of nhaA 18715..19620 Escherichia coli str. K-12 substr. MG1655 944757 b0021 CDS insB1 NC_000913.3 19811 20314 R IS1 transposase B complement(19811..20314) Escherichia coli str. K-12 substr. MG1655 944743 b0022 CDS insA NC_000913.3 20233 20508 R IS1 repressor TnpA complement(20233..20508) Escherichia coli str. K-12 substr. MG1655 948449 b0023 CDS rpsT NC_000913.3 20815 21078 R 30S ribosomal subunit protein S20 complement(20815..21078) Escherichia coli str. K-12 substr. MG1655 944759 b0024 CDS yaaY NC_000913.3 21181 21399 D uncharacterized protein 21181..21399 Escherichia coli str. K-12 substr. MG1655 949128 b0025 CDS ribF NC_000913.3 21407 22348 D bifunctional riboflavin kinase/FAD synthetase 21407..22348 Escherichia coli str. K-12 substr. MG1655 949129 b0026 CDS ileS NC_000913.3 22391 25207 D isoleucine tRNA synthetase; isoleucyl-tRNA synthetase 22391..25207 Escherichia coli str. K-12 substr. MG1655 944761 b0027 CDS lspA NC_000913.3 25207 25701 D prolipoprotein signal peptidase (SPase II); prolipoprotein signal peptidase (signal peptidase II) 25207..25701 Escherichia coli str. K-12 substr. MG1655 944800 b0028 CDS fkpB NC_000913.3 25826 26275 D FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) 25826..26275 Escherichia coli str. K-12 substr. MG1655 944807 b0029 CDS ispH NC_000913.3 26277 27227 D 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, 4Fe-4S protein 26277..27227 Escherichia coli str. K-12 substr. MG1655 944777 b0030 CDS rihC NC_000913.3 27293 28207 D ribonucleoside hydrolase 3 27293..28207 Escherichia coli str. K-12 substr. MG1655 944796 b0031 CDS dapB NC_000913.3 28374 29195 D dihydrodipicolinate reductase 28374..29195 Escherichia coli str. K-12 substr. MG1655 944762 b0032 CDS carA NC_000913.3 29651 30799 D carbamoyl phosphate synthetase small subunit, glutamine amidotransferase 29651..30799 Escherichia coli str. K-12 substr. MG1655 949025 b0033 CDS carB NC_000913.3 30817 34038 D carbamoyl-phosphate synthase large subunit 30817..34038 Escherichia coli str. K-12 substr. MG1655 944775 b0034 CDS caiF NC_000913.3 34300 34695 D transcriptional regulator of cai operon; cai operon transcriptional activator 34300..34695 Escherichia coli str. K-12 substr. MG1655 944795 b0035 CDS caiE NC_000913.3 34781 35371 R possible synthesis of cofactor for carnitine racemase and dehydratase; stimulator of CaiD and CaiB enzyme activities complement(34781..35371) Escherichia coli str. K-12 substr. MG1655 948999 b0036 CDS caiD NC_000913.3 35377 36162 R carnitine racemase; carnitinyl-CoA dehydratase complement(35377..36162) Escherichia coli str. K-12 substr. MG1655 948995 b0037 CDS caiC NC_000913.3 36271 37824 R probable crotonobetaine/carnitine-CoA ligase; putative crotonobetaine/carnitine-CoA ligase complement(36271..37824) Escherichia coli str. K-12 substr. MG1655 944886 b0038 CDS caiB NC_000913.3 37898 39115 R l-carnitine dehydratase; crotonobetainyl CoA:carnitine CoA transferase complement(37898..39115) Escherichia coli str. K-12 substr. MG1655 948997 b0039 CDS caiA NC_000913.3 39244 40386 R probable carnitine operon oxidoreductase; crotonobetaine reductase subunit II, FAD-binding complement(39244..40386) Escherichia coli str. K-12 substr. MG1655 949064 b0040 CDS caiT NC_000913.3 40417 41931 R probable carnitine transporter; putative transporter complement(40417..41931) Escherichia coli str. K-12 substr. MG1655 944765 b0041 CDS fixA NC_000913.3 42403 43173 D probable flavoprotein subunit, carnitine metabolism; anaerobic carnitine reduction putative electron transfer flavoprotein subunit 42403..43173 Escherichia coli str. K-12 substr. MG1655 947316 b0042 CDS fixB NC_000913.3 43188 44129 D probable flavoprotein subunit, carnitine metabolism; putative electron transfer flavoprotein, NAD/FAD-binding domain and ETFP adenine nucleotide-binding domain-like protein 43188..44129 Escherichia coli str. K-12 substr. MG1655 948939 b0043 CDS fixC NC_000913.3 44180 45466 D flavoprotein; electron transport; putative oxidoreductase 44180..45466 Escherichia coli str. K-12 substr. MG1655 948958 b0044 CDS fixX NC_000913.3 45463 45750 D putative ferredoxin; putative 4Fe-4S ferredoxin-type protein 45463..45750 Escherichia coli str. K-12 substr. MG1655 948590 b0045 CDS yaaU NC_000913.3 45807 47138 D putative transport protein; putative MFS sugar transporter; membrane protein 45807..47138 Escherichia coli str. K-12 substr. MG1655 944766 b0046 CDS kefF NC_000913.3 47246 47776 D putative NAD(P)H oxidoreductase; potassium-efflux system ancillary protein for KefC, glutathione-regulated; quinone oxidoreductase, FMN-dependent 47246..47776 Escherichia coli str. K-12 substr. MG1655 944767 b0047 CDS kefC NC_000913.3 47769 49631 D K+ efflux antiporter, glutathione-regulated; potassium:proton antiporter 47769..49631 Escherichia coli str. K-12 substr. MG1655 944773 b0048 CDS folA NC_000913.3 49823 50302 D dihydrofolate reductase type I; trimethoprim resistance; dihydrofolate reductase 49823..50302 Escherichia coli str. K-12 substr. MG1655 944790 b0049 CDS apaH NC_000913.3 50380 51222 R diadenosine tetraphosphatase complement(50380..51222) Escherichia coli str. K-12 substr. MG1655 944770 b0050 CDS apaG NC_000913.3 51229 51606 R protein associated with Co2+ and Mg2+ efflux complement(51229..51606) Escherichia coli str. K-12 substr. MG1655 944772 b0051 CDS rsmA NC_000913.3 51609 52430 R 16S rRNA m(6)A1518, m(6)A1519 dimethyltransferase, SAM-dependent complement(51609..52430) Escherichia coli str. K-12 substr. MG1655 944939 b0052 CDS pdxA NC_000913.3 52427 53416 R pyridoxine biosynthesis; 4-hydroxy-L-threonine phosphate dehydrogenase, NAD-dependent complement(52427..53416) Escherichia coli str. K-12 substr. MG1655 944919 b0053 CDS surA NC_000913.3 53416 54702 R survival protein; peptidyl-prolyl cis-trans isomerase (PPIase) complement(53416..54702) Escherichia coli str. K-12 substr. MG1655 944812 b0054 CDS lptD NC_000913.3 54755 57109 R organic solvent tolerance; LPS assembly OM complex LptDE, beta-barrel component complement(54755..57109) Escherichia coli str. K-12 substr. MG1655 945011 b0055 CDS djlA NC_000913.3 57364 58179 D membrane-anchored DnaK co-chaperone, DNA-binding protein 57364..58179 Escherichia coli str. K-12 substr. MG1655 948992 b4659 CDS yabP NC_000913.3 58474 59279 D pseudogene, pentapeptide repeats-containing; <NA> join(58474..59052,59052..59279) Escherichia coli str. K-12 substr. MG1655 944776 b0058 CDS rluA NC_000913.3 59687 60346 R dual specificity 23S rRNA pseudouridine(746), tRNA pseudouridine(32) synthase, SAM-dependent complement(59687..60346) Escherichia coli str. K-12 substr. MG1655 946262 b0059 CDS rapA NC_000913.3 60358 63264 R probable ATP-dependent RNA helicase; RNA polymerase remodeling/recycling factor ATPase; RNA polymerase-associated, ATP-dependent RNA translocase complement(60358..63264) Escherichia coli str. K-12 substr. MG1655 948523 b0060 CDS polB NC_000913.3 63429 65780 R DNA polymerase II complement(63429..65780) Escherichia coli str. K-12 substr. MG1655 944779 b0061 CDS araD NC_000913.3 65855 66550 R L-ribulose-5-phosphate 4-epimerase complement(65855..66550) Escherichia coli str. K-12 substr. MG1655 945294 b0062 CDS araA NC_000913.3 66835 68337 R L-arabinose isomerase complement(66835..68337) Escherichia coli str. K-12 substr. MG1655 947511 b0063 CDS araB NC_000913.3 68348 70048 R L-ribulokinase complement(68348..70048) Escherichia coli str. K-12 substr. MG1655 946017 b0064 CDS araC NC_000913.3 70387 71265 D transcriptional regulator for ara operon; ara regulon transcriptional activator; autorepressor 70387..71265 Escherichia coli str. K-12 substr. MG1655 944780 b0065 CDS yabI NC_000913.3 71351 72115 D DedA family inner membrane protein 71351..72115 Escherichia coli str. K-12 substr. MG1655 944783 b0066 CDS thiQ NC_000913.3 72229 72927 R putative ATP-binding component of a transport system; thiamine/thiamine pyrophosphate ABC transporter ATPase complement(72229..72927) Escherichia coli str. K-12 substr. MG1655 944785 b0067 CDS thiP NC_000913.3 72911 74521 R thiamine/thiamine pyrophosphate ABC transporter permease complement(72911..74521) Escherichia coli str. K-12 substr. MG1655 944784 b0068 CDS thiB NC_000913.3 74497 75480 R thiamin-binding periplasmic protein; periplasmic-binding component of ABC superfamily; thiamine/thiamine pyrophosphate/thiamine monophosphate ABC transporter periplasmic binding protein complement(74497..75480) Escherichia coli str. K-12 substr. MG1655 946306 b0069 CDS sgrR NC_000913.3 75644 77299 R putative transport protein; transcriptional DNA-binding transcriptional activator of sgrS sRNA complement(75644..77299) Escherichia coli str. K-12 substr. MG1655 944788 b4662 CDS sgrT NC_000913.3 77388 77519 D inhibitor of glucose uptake 77388..77519 Escherichia coli str. K-12 substr. MG1655 7751624 b0070 CDS setA NC_000913.3 77621 78799 D broad specificity sugar efflux system 77621..78799 Escherichia coli str. K-12 substr. MG1655 944793 b0071 CDS leuD NC_000913.3 78848 79453 R isopropylmalate isomerase subunit; 3-isopropylmalate dehydratase small subunit complement(78848..79453) Escherichia coli str. K-12 substr. MG1655 945642 b0072 CDS leuC NC_000913.3 79464 80864 R 3-isopropylmalate isomerase (dehydratase) subunit; 3-isopropylmalate dehydratase large subunit complement(79464..80864) Escherichia coli str. K-12 substr. MG1655 945076 b0073 CDS leuB NC_000913.3 80867 81958 R 3-isopropylmalate dehydrogenase, NAD(+)-dependent complement(80867..81958) Escherichia coli str. K-12 substr. MG1655 944798 b0074 CDS leuA NC_000913.3 81958 83529 R 2-isopropylmalate synthase complement(81958..83529) Escherichia coli str. K-12 substr. MG1655 947465 b0075 CDS leuL NC_000913.3 83622 83708 R leu operon leader peptide complement(83622..83708) Escherichia coli str. K-12 substr. MG1655 946072 b0076 CDS leuO NC_000913.3 84368 85312 D probable transcriptional activator for leuABCD operon; global transcription factor 84368..85312 Escherichia coli str. K-12 substr. MG1655 949034 b0077 CDS ilvI NC_000913.3 85630 87354 D acetolactate synthase III, valine sensitive, large subunit; acetolactate synthase 3 large subunit 85630..87354 Escherichia coli str. K-12 substr. MG1655 948793 b0078 CDS ilvH NC_000913.3 87357 87848 D acetolactate synthase III, valine sensitive, small subunit; acetolactate synthase 3, small subunit, valine-sensitive 87357..87848 Escherichia coli str. K-12 substr. MG1655 947267 b0080 CDS cra NC_000913.3 88028 89032 D transcriptional repressor of fru operon and others; transcriptional repressor-activator for carbon metabolism 88028..89032 Escherichia coli str. K-12 substr. MG1655 944804 b0081 CDS mraZ NC_000913.3 89634 90092 D RsmH methytransferase inhibitor 89634..90092 Escherichia coli str. K-12 substr. MG1655 944810 b0082 CDS rsmH NC_000913.3 90094 91035 D putative apolipoprotein; 16S rRNA m(4)C1402 methyltransferase, SAM-dependent 90094..91035 Escherichia coli str. K-12 substr. MG1655 944806 b0083 CDS ftsL NC_000913.3 91032 91397 D cell division protein; ingrowth of wall at septum; membrane bound cell division leucine zipper septum protein 91032..91397 Escherichia coli str. K-12 substr. MG1655 944803 b0084 CDS ftsI NC_000913.3 91413 93179 D septum formation; penicillin-binding protein 3; peptidoglycan synthetase; transpeptidase involved in septal peptidoglycan synthesis; penicillin-binding protein 3 91413..93179 Escherichia coli str. K-12 substr. MG1655 944799 b0085 CDS murE NC_000913.3 93166 94653 D UDP-N-acetylmuramoyl-L-alanyl-D-glutamate:meso- diaminopimelate ligase 93166..94653 Escherichia coli str. K-12 substr. MG1655 944791 b0086 CDS murF NC_000913.3 94650 96008 D UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D- alanine ligase 94650..96008 Escherichia coli str. K-12 substr. MG1655 944813 b0087 CDS mraY NC_000913.3 96002 97084 D phospho-N-acetylmuramoyl-pentapeptide transferase?; phospho-N-acetylmuramoyl-pentapeptide transferase 96002..97084 Escherichia coli str. K-12 substr. MG1655 944814 b0088 CDS murD NC_000913.3 97087 98403 D UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase 97087..98403 Escherichia coli str. K-12 substr. MG1655 944818 b0089 CDS ftsW NC_000913.3 98403 99647 D cell division; membrane protein involved in shape determination; putative lipid II flippase; integral membrane protein; FtsZ ring stabilizer 98403..99647 Escherichia coli str. K-12 substr. MG1655 946322 b0090 CDS murG NC_000913.3 99644 100711 D N-acetylglucosaminyl transferase 99644..100711 Escherichia coli str. K-12 substr. MG1655 946321 b0091 CDS murC NC_000913.3 100765 102240 D UDP-N-acetylmuramate:L-alanine ligase 100765..102240 Escherichia coli str. K-12 substr. MG1655 946153 b0092 CDS ddlB NC_000913.3 102233 103153 D D-alanine-D-alanine ligase B, affects cell division; D-alanine:D-alanine ligase 102233..103153 Escherichia coli str. K-12 substr. MG1655 946324 b0093 CDS ftsQ NC_000913.3 103155 103985 D cell division protein; ingrowth of wall at septum; divisome assembly protein, membrane anchored protein involved in growth of wall at septum 103155..103985 Escherichia coli str. K-12 substr. MG1655 944823 b0094 CDS ftsA NC_000913.3 103982 105244 D ATP-binding cell division protein, septation process, complexes with FtsZ, associated with junctions of inner and outer membranes; ATP-binding cell division FtsK recruitment protein 103982..105244 Escherichia coli str. K-12 substr. MG1655 944778 b0095 CDS ftsZ NC_000913.3 105305 106456 D cell division; forms circumferential ring; tubulin-like GTP-binding protein and GTPase; GTP-binding tubulin-like cell division protein 105305..106456 Escherichia coli str. K-12 substr. MG1655 944786 b0096 CDS lpxC NC_000913.3 106557 107474 D UDP-3-O-acyl N-acetylglucosamine deacetylase; lipid A biosynthesis; UDP-3-O-acyl N-acetylglucosamine deacetylase 106557..107474 Escherichia coli str. K-12 substr. MG1655 944816 b0097 CDS secM NC_000913.3 107705 108217 D regulator of secA translation 107705..108217 Escherichia coli str. K-12 substr. MG1655 944831 b0098 CDS secA NC_000913.3 108279 110984 D preprotein translocase; secretion protein; preprotein translocase subunit, ATPase 108279..110984 Escherichia coli str. K-12 substr. MG1655 944821 b0099 CDS mutT NC_000913.3 111044 111433 D 7,8-dihydro-8-oxoguanine-triphosphatase, prefers dGTP, causes AT-GC transversions; dGTP-preferring nucleoside triphosphate pyrophosphohydrolase 111044..111433 Escherichia coli str. K-12 substr. MG1655 944824 b0101 CDS yacG NC_000913.3 111649 111846 R DNA gyrase inhibitor complement(111649..111846) Escherichia coli str. K-12 substr. MG1655 945630 b0102 CDS zapD NC_000913.3 111856 112599 R FtsZ stabilizer complement(111856..112599) Escherichia coli str. K-12 substr. MG1655 944873 b0103 CDS coaE NC_000913.3 112599 113219 R putative DNA repair protein; dephospho-CoA kinase complement(112599..113219) Escherichia coli str. K-12 substr. MG1655 949060 b0104 CDS guaC NC_000913.3 113444 114487 D GMP reductase 113444..114487 Escherichia coli str. K-12 substr. MG1655 948986 b0106 CDS hofC NC_000913.3 114522 115724 R putative integral membrane protein involved in biogenesis of fimbriae, protein transport, DNA uptake; assembly protein in type IV pilin biogenesis, transmembrane protein complement(114522..115724) Escherichia coli str. K-12 substr. MG1655 945806 b0107 CDS hofB NC_000913.3 115714 117099 R putative integral membrane protein involved in biogenesis of fimbriae, protein transport, DNA uptake; T2SE secretion family protein; P-loop ATPase superfamily protein complement(115714..117099) Escherichia coli str. K-12 substr. MG1655 947481 b0108 CDS ppdD NC_000913.3 117109 117549 R prelipin peptidase dependent protein; putative prepilin peptidase-dependent pilin complement(117109..117549) Escherichia coli str. K-12 substr. MG1655 945817 b0109 CDS nadC NC_000913.3 117752 118645 R quinolinate phosphoribosyltransferase complement(117752..118645) Escherichia coli str. K-12 substr. MG1655 948869 b0110 CDS ampD NC_000913.3 118733 119284 D regulates ampC; 1,6-anhydro-N-acetylmuramyl-L-alanine amidase, Zn-dependent; murein amidase 118733..119284 Escherichia coli str. K-12 substr. MG1655 948877 b0111 CDS ampE NC_000913.3 119281 120135 D regulates ampC; ampicillin resistance inner membrane protein; putative signaling protein in beta-lactamase regulation 119281..120135 Escherichia coli str. K-12 substr. MG1655 946678 b0112 CDS aroP NC_000913.3 120178 121551 R aromatic amino acid transport protein; aromatic amino acid transporter complement(120178..121551) Escherichia coli str. K-12 substr. MG1655 946018 b0113 CDS pdhR NC_000913.3 122092 122856 D transcriptional regulator for pyruvate dehydrogenase complex; pyruvate dehydrogenase complex repressor; autorepressor 122092..122856 Escherichia coli str. K-12 substr. MG1655 944827 b0114 CDS aceE NC_000913.3 123017 125680 D pyruvate dehydrogenase (decarboxylase component); pyruvate dehydrogenase, decarboxylase component E1, thiamine triphosphate-binding 123017..125680 Escherichia coli str. K-12 substr. MG1655 944834 b0115 CDS aceF NC_000913.3 125695 127587 D pyruvate dehydrogenase (dihydrolipoyltransacetylase component); pyruvate dehydrogenase, dihydrolipoyltransacetylase component E2 125695..127587 Escherichia coli str. K-12 substr. MG1655 944794 b0116 CDS lpd NC_000913.3 127912 129336 D lipoamide dehydrogenase (NADH); component of 2-oxodehydrogenase and pyruvate complexes; L-protein of glycine cleavage complex; dihydrolipoyl dehydrogenase; E3 component of pyruvate and 2-oxoglutarate dehydrogenases complexes; glycine cleavage system L protein; dihydrolipoamide dehydrogenase 127912..129336 Escherichia coli str. K-12 substr. MG1655 944854 b0117 CDS yacH NC_000913.3 129407 131260 R putative membrane protein; DUF3300 family protein complement(129407..131260) Escherichia coli str. K-12 substr. MG1655 944868 b0118 CDS acnB NC_000913.3 131615 134212 D aconitate hydrase B; aconitate hydratase 2; aconitase B; 2-methyl-cis-aconitate hydratase 131615..134212 Escherichia coli str. K-12 substr. MG1655 944864 b0119 CDS yacL NC_000913.3 134388 134750 D UPF0231 family protein 134388..134750 Escherichia coli str. K-12 substr. MG1655 944809 b0120 CDS speD NC_000913.3 134788 135582 R S-adenosylmethionine decarboxylase complement(134788..135582) Escherichia coli str. K-12 substr. MG1655 947719 b0121 CDS speE NC_000913.3 135598 136464 R spermidine synthase = putrescine aminopropyltransferase; spermidine synthase (putrescine aminopropyltransferase) complement(135598..136464) Escherichia coli str. K-12 substr. MG1655 947726 b0122 CDS yacC NC_000913.3 136570 136917 R PulS_OutS family protein complement(136570..136917) Escherichia coli str. K-12 substr. MG1655 948472 b0123 CDS cueO NC_000913.3 137083 138633 D multicopper oxidase (laccase) 137083..138633 Escherichia coli str. K-12 substr. MG1655 947736 b0124 CDS gcd NC_000913.3 138835 141225 R glucose dehydrogenase complement(138835..141225) Escherichia coli str. K-12 substr. MG1655 944830 b0125 CDS hpt NC_000913.3 141431 141967 D hypoxanthine phosphoribosyltransferase 141431..141967 Escherichia coli str. K-12 substr. MG1655 946624 b0126 CDS can NC_000913.3 142008 142670 R putative carbonic anhdrase; carbonic anhydrase complement(142008..142670) Escherichia coli str. K-12 substr. MG1655 944832 b0127 CDS yadG NC_000913.3 142779 143705 D putative ATP-binding component of a transport system; putative ABC transporter ATPase 142779..143705 Escherichia coli str. K-12 substr. MG1655 944833 b0128 CDS yadH NC_000913.3 143702 144472 D putative ABC transporter permease 143702..144472 Escherichia coli str. K-12 substr. MG1655 944836 b0129 CDS yadI NC_000913.3 144577 145017 D putative PTS enzyme II B component; putative PTS Enzyme IIA 144577..145017 Escherichia coli str. K-12 substr. MG1655 947397 b0130 CDS yadE NC_000913.3 145081 146310 D conserved hypothetical protein; putative polysaccharide deacetylase lipoprotein 145081..146310 Escherichia coli str. K-12 substr. MG1655 946536 b0131 CDS panD NC_000913.3 146314 146694 R aspartate 1-decarboxylase complement(146314..146694) Escherichia coli str. K-12 substr. MG1655 945686 b0132 CDS yadD NC_000913.3 146968 147870 D transposase_31 family protein 146968..147870 Escherichia coli str. K-12 substr. MG1655 944781 b0133 CDS panC NC_000913.3 147944 148795 R pantothenate synthetase complement(147944..148795) Escherichia coli str. K-12 substr. MG1655 944958 b0134 CDS panB NC_000913.3 148807 149601 R 3-methyl-2-oxobutanoate hydroxymethyltransferase complement(148807..149601) Escherichia coli str. K-12 substr. MG1655 944839 b0135 CDS yadC NC_000913.3 149715 150953 R putative fimbrial-like protein; putative fimbrial-like adhesin protein complement(149715..150953) Escherichia coli str. K-12 substr. MG1655 944837 b0136 CDS yadK NC_000913.3 151003 151599 R putative fimbrial protein; putative fimbrial-like adhesin protein complement(151003..151599) Escherichia coli str. K-12 substr. MG1655 944835 b0137 CDS yadL NC_000913.3 151626 152231 R putative fimbrial protein; putative fimbrial-like adhesin protein complement(151626..152231) Escherichia coli str. K-12 substr. MG1655 944829 b0138 CDS yadM NC_000913.3 152243 152812 R putative fimbrial-like protein; putative fimbrial-like adhesin protein complement(152243..152812) Escherichia coli str. K-12 substr. MG1655 944828 b0139 CDS htrE NC_000913.3 152829 155426 R probable outer membrane porin protein involved in fimbrial assembly; putative outer membrane usher protein complement(152829..155426) Escherichia coli str. K-12 substr. MG1655 944819 b0140 CDS yadV NC_000913.3 155461 156201 R probable pilin chaperone similar to PapD; putative periplasmic pilin chaperone complement(155461..156201) Escherichia coli str. K-12 substr. MG1655 944859 b0141 CDS yadN NC_000913.3 156299 156883 R putative fimbrial-like protein; putative fimbrial-like adhesin protein complement(156299..156883) Escherichia coli str. K-12 substr. MG1655 944841 b0142 CDS folK NC_000913.3 157253 157732 R 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase; 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase complement(157253..157732) Escherichia coli str. K-12 substr. MG1655 948792 b0143 CDS pcnB NC_000913.3 157729 159126 R poly(A) polymerase complement(157729..159126) Escherichia coli str. K-12 substr. MG1655 947318 b0144 CDS gluQ NC_000913.3 159186 160112 R putative tRNA synthetase; glutamyl-Q tRNA(Asp) synthetase complement(159186..160112) Escherichia coli str. K-12 substr. MG1655 944846 b0145 CDS dksA NC_000913.3 160149 160604 R dnaK suppressor protein; transcriptional regulator of rRNA transcription; DnaK suppressor protein complement(160149..160604) Escherichia coli str. K-12 substr. MG1655 944850 b0146 CDS sfsA NC_000913.3 160782 161486 R probable regulator for maltose metabolism; sugar fermentation stimulation protein A complement(160782..161486) Escherichia coli str. K-12 substr. MG1655 944855 b0147 CDS ligT NC_000913.3 161501 162031 R 2'-5' RNA ligase complement(161501..162031) Escherichia coli str. K-12 substr. MG1655 944848 b0148 CDS hrpB NC_000913.3 162105 164534 D helicase, ATP-dependent; putative ATP-dependent helicase 162105..164534 Escherichia coli str. K-12 substr. MG1655 944845 b0149 CDS mrcB NC_000913.3 164730 167264 D peptidoglycan synthetase; penicillin-binding protein 1B; fused glycosyl transferase and transpeptidase 164730..167264 Escherichia coli str. K-12 substr. MG1655 944843 b0150 CDS fhuA NC_000913.3 167484 169727 D outer membrane protein receptor for ferrichrome, colicin M, and phages T1, T5, and phi80; ferrichrome outer membrane transporter 167484..169727 Escherichia coli str. K-12 substr. MG1655 944856 b0151 CDS fhuC NC_000913.3 169778 170575 D ATP-binding component of hydroxymate-dependent iron transport; iron(3+)-hydroxamate import ABC transporter ATPase 169778..170575 Escherichia coli str. K-12 substr. MG1655 945250 b0152 CDS fhuD NC_000913.3 170575 171465 D hydroxamate-dependent iron uptake, cytoplasmic membrane component; periplasmic-binding component of ABC superfamily; iron(3+)-hydroxamate import ABC transporter periplasmic binding protein 170575..171465 Escherichia coli str. K-12 substr. MG1655 947510 b0153 CDS fhuB NC_000913.3 171462 173444 D iron(3+)-hydroxamate import ABC transporter permease 171462..173444 Escherichia coli str. K-12 substr. MG1655 946890 b0154 CDS hemL NC_000913.3 173602 174882 R glutamate-1-semialdehyde aminotransferase (aminomutase) complement(173602..174882) Escherichia coli str. K-12 substr. MG1655 946892 b0155 CDS clcA NC_000913.3 175107 176528 D putative channel transporter; H(+)/Cl(-) exchange transporter 175107..176528 Escherichia coli str. K-12 substr. MG1655 946715 b0156 CDS erpA NC_000913.3 176610 176954 D iron-sulfur cluster insertion protein 176610..176954 Escherichia coli str. K-12 substr. MG1655 944857 b0157 CDS yadS NC_000913.3 177001 177624 R UPF0126 family inner membrane protein complement(177001..177624) Escherichia coli str. K-12 substr. MG1655 949062 b0158 CDS btuF NC_000913.3 177662 178462 R vitamin B12 ABC transporter periplasmic binding protein complement(177662..178462) Escherichia coli str. K-12 substr. MG1655 947574 b0159 CDS mtn NC_000913.3 178455 179153 R 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase complement(178455..179153) Escherichia coli str. K-12 substr. MG1655 948542 b0160 CDS dgt NC_000913.3 179237 180754 D deoxyguanosine triphosphate triphosphohydrolase 179237..180754 Escherichia coli str. K-12 substr. MG1655 947177 b0161 CDS degP NC_000913.3 180884 182308 D periplasmic serine protease Do; heat shock protein HtrA; serine endoprotease (protease Do), membrane-associated 180884..182308 Escherichia coli str. K-12 substr. MG1655 947139 b0162 CDS cdaR NC_000913.3 182463 183620 D carbohydrate diacid regulon transcriptional regulator; autoregulator 182463..183620 Escherichia coli str. K-12 substr. MG1655 944860 b0163 CDS yaeH NC_000913.3 183709 184095 R putative structural protein; UPF0325 family protein complement(183709..184095) Escherichia coli str. K-12 substr. MG1655 947044 b0164 CDS yaeI NC_000913.3 184257 185069 R phosphodiesterase with model substrate bis-pNPP complement(184257..185069) Escherichia coli str. K-12 substr. MG1655 945002 b0166 CDS dapD NC_000913.3 185123 185947 R 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase complement(185123..185947) Escherichia coli str. K-12 substr. MG1655 944862 b0167 CDS glnD NC_000913.3 185978 188650 R protein PII; uridylyltransferase acts on regulator of glnA; uridylyltransferase complement(185978..188650) Escherichia coli str. K-12 substr. MG1655 944863 b0168 CDS map NC_000913.3 188712 189506 R methionine aminopeptidase complement(188712..189506) Escherichia coli str. K-12 substr. MG1655 947882 b0169 CDS rpsB NC_000913.3 189874 190599 D 30S ribosomal subunit protein S2 189874..190599 Escherichia coli str. K-12 substr. MG1655 947874 b0170 CDS tsf NC_000913.3 190857 191708 D translation elongation factor EF-Ts 190857..191708 Escherichia coli str. K-12 substr. MG1655 944866 b0171 CDS pyrH NC_000913.3 191855 192580 D uridylate kinase 191855..192580 Escherichia coli str. K-12 substr. MG1655 944989 b0172 CDS frr NC_000913.3 192872 193429 D ribosome releasing factor; ribosome recycling factor 192872..193429 Escherichia coli str. K-12 substr. MG1655 946122 b0173 CDS dxr NC_000913.3 193521 194717 D 1-deoxy-D-xylulose 5-phosphate reductoisomerase 193521..194717 Escherichia coli str. K-12 substr. MG1655 945019 b0174 CDS ispU NC_000913.3 194903 195664 D undecaprenyl pyrophosphate synthetase (di-trans,poly-cis-decaprenylcistransferase); undecaprenyl pyrophosphate synthase 194903..195664 Escherichia coli str. K-12 substr. MG1655 944874 b0175 CDS cdsA NC_000913.3 195677 196534 D CDP-diglyceride synthetase; CDP-diglyceride synthase 195677..196534 Escherichia coli str. K-12 substr. MG1655 944876 b0176 CDS rseP NC_000913.3 196546 197898 D inner membrane zinc RIP metalloprotease; RpoE activator, by degrading RseA; cleaved signal peptide endoprotease 196546..197898 Escherichia coli str. K-12 substr. MG1655 944871 b0177 CDS bamA NC_000913.3 197928 200360 D putative outer membrane antigen; BamABCDE complex OM biogenesis outer membrane pore-forming assembly factor 197928..200360 Escherichia coli str. K-12 substr. MG1655 944870 b0178 CDS skp NC_000913.3 200482 200967 D periplasmic molecular chaperone for outer membrane proteins; periplasmic chaperone 200482..200967 Escherichia coli str. K-12 substr. MG1655 944861 b0179 CDS lpxD NC_000913.3 200971 201996 D UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase 200971..201996 Escherichia coli str. K-12 substr. MG1655 944882 b0180 CDS fabZ NC_000913.3 202101 202556 D (3R)-hydroxymyristol acyl carrier protein dehydratase 202101..202556 Escherichia coli str. K-12 substr. MG1655 944888 b0181 CDS lpxA NC_000913.3 202560 203348 D UDP-N-acetylglucosamine acetyltransferase; lipid A biosynthesis; UDP-N-acetylglucosamine acetyltransferase 202560..203348 Escherichia coli str. K-12 substr. MG1655 944849 b0182 CDS lpxB NC_000913.3 203348 204496 D tetraacyldisaccharide-1-P; lipid A biosynthesis, penultimate step; tetraacyldisaccharide-1-P synthase 203348..204496 Escherichia coli str. K-12 substr. MG1655 944838 b0183 CDS rnhB NC_000913.3 204493 205089 D RNAse HII, degrades RNA of DNA-RNA hybrids; ribonuclease HII, degrades RNA of DNA-RNA hybrids 204493..205089 Escherichia coli str. K-12 substr. MG1655 944852 b0184 CDS dnaE NC_000913.3 205126 208608 D DNA polymerase III, alpha subunit; DNA polymerase III alpha subunit 205126..208608 Escherichia coli str. K-12 substr. MG1655 944877 b0185 CDS accA NC_000913.3 208621 209580 D acetylCoA carboxylase, carboxytransferase component, alpha subunit; acetyl-CoA carboxylase, carboxytransferase, alpha subunit 208621..209580 Escherichia coli str. K-12 substr. MG1655 944895 b0186 CDS ldcC NC_000913.3 209679 211820 D lysine decarboxylase 2, constitutive 209679..211820 Escherichia coli str. K-12 substr. MG1655 944887 b0187 CDS yaeR NC_000913.3 211877 212266 D putative lyase 211877..212266 Escherichia coli str. K-12 substr. MG1655 944875 b0188 CDS tilS NC_000913.3 212331 213629 D tRNA(Ile)-lysidine synthetase 212331..213629 Escherichia coli str. K-12 substr. MG1655 944889 b0189 CDS rof NC_000913.3 213678 213932 R modulator of Rho-dependent transcription termination complement(213678..213932) Escherichia coli str. K-12 substr. MG1655 944891 b4406 CDS yaeP NC_000913.3 213925 214125 R conserved hypothetical protein; UPF0253 family protein complement(213925..214125) Escherichia coli str. K-12 substr. MG1655 1450233 b0190 CDS yaeQ NC_000913.3 214291 214836 D PDDEXK superfamily protein 214291..214836 Escherichia coli str. K-12 substr. MG1655 946809 b0191 CDS arfB NC_000913.3 214833 215255 D alternative stalled-ribosome rescue factor B; peptidyl-tRNA hydrolase, ribosome-attached 214833..215255 Escherichia coli str. K-12 substr. MG1655 946046 b0192 CDS nlpE NC_000913.3 215269 215979 D copper homeostasis protein (lipoprotein); lipoprotein involved with copper homeostasis and adhesion 215269..215979 Escherichia coli str. K-12 substr. MG1655 946782 b0193 CDS yaeF NC_000913.3 216179 217003 R putative lipoprotein complement(216179..217003) Escherichia coli str. K-12 substr. MG1655 944892 b0194 CDS proS NC_000913.3 217057 218775 R proline tRNA synthetase; prolyl-tRNA synthetase complement(217057..218775) Escherichia coli str. K-12 substr. MG1655 949116 b0195 CDS tsaA NC_000913.3 218887 219594 R tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase, SAM-dependent complement(218887..219594) Escherichia coli str. K-12 substr. MG1655 949112 b0196 CDS rcsF NC_000913.3 219591 219995 R regulator in colanic acid synthesis; interacts with RcsB; putative outer membrane protein complement(219591..219995) Escherichia coli str. K-12 substr. MG1655 949113 b0197 CDS metQ NC_000913.3 220113 220928 R D-methionine transport protein (ABC superfamily, peri_bind); DL-methionine transporter subunit complement(220113..220928) Escherichia coli str. K-12 substr. MG1655 944893 b0198 CDS metI NC_000913.3 220968 221621 R D- and L-methionine transport protein (ABC superfamily, membrane); DL-methionine transporter subunit complement(220968..221621) Escherichia coli str. K-12 substr. MG1655 944894 b0199 CDS metN NC_000913.3 221614 222645 R D- and L-methionine transport protein (ABC superfamily, atp_bind); DL-methionine transporter subunit complement(221614..222645) Escherichia coli str. K-12 substr. MG1655 944896 b0200 CDS gmhB NC_000913.3 222833 223408 D D,D-heptose 1,7-bisphosphate phosphatase 222833..223408 Escherichia coli str. K-12 substr. MG1655 944879 b0207 CDS dkgB NC_000913.3 229167 229970 D 2,5-diketo-D-gluconate reductase B 229167..229970 Escherichia coli str. K-12 substr. MG1655 944901 b0208 CDS yafC NC_000913.3 229967 230881 R putative transcriptional regulator LYSR-type; LysR family putative transcriptional regulator complement(229967..230881) Escherichia coli str. K-12 substr. MG1655 947507 b0209 CDS yafD NC_000913.3 231122 231922 D endo/exonuclease/phosphatase family protein 231122..231922 Escherichia coli str. K-12 substr. MG1655 946286 b0210 CDS yafE NC_000913.3 231926 232549 D putative biotin synthesis protein; putative S-adenosyl-L-methionine-dependent methyltransferase 231926..232549 Escherichia coli str. K-12 substr. MG1655 946197 b0211 CDS mltD NC_000913.3 232597 233955 R putative membrane-bound lytic murein transglycosylase D complement(232597..233955) Escherichia coli str. K-12 substr. MG1655 945694 b0212 CDS gloB NC_000913.3 234027 234782 R probable hydroxyacylglutathione hydrolase; hydroxyacylglutathione hydrolase complement(234027..234782) Escherichia coli str. K-12 substr. MG1655 944902 b0213 CDS yafS NC_000913.3 234816 235538 D putative S-adenosyl-L-methionine-dependent methyltransferase 234816..235538 Escherichia coli str. K-12 substr. MG1655 944903 b0214 CDS rnhA NC_000913.3 235535 236002 R RNase HI, degrades RNA of DNA-RNA hybrids, participates in DNA replication; ribonuclease HI, degrades RNA of DNA-RNA hybrids complement(235535..236002) Escherichia coli str. K-12 substr. MG1655 946955 b0215 CDS dnaQ NC_000913.3 236067 236798 D DNA polymerase III, epsilon subunit; DNA polymerase III epsilon subunit 236067..236798 Escherichia coli str. K-12 substr. MG1655 946441 b0217 CDS yafT NC_000913.3 237335 238120 D putative aminopeptidase; lipoprotein 237335..238120 Escherichia coli str. K-12 substr. MG1655 949009 b4586 CDS ykfM NC_000913.3 238257 238736 R lethality reduction protein, putative inner membrane protein complement(238257..238736) Escherichia coli str. K-12 substr. MG1655 5061498 b0218 CDS yafU NC_000913.3 238746 239102 R pseudogene; <NA> complement(238746..239102) Escherichia coli str. K-12 substr. MG1655 946644 b4503 CDS yafF NC_000913.3 239106 239378 D pseudogene, H repeat-associated protein; <NA> 239106..239378 Escherichia coli str. K-12 substr. MG1655 1450235 b0219 CDS yafV NC_000913.3 239419 240189 R putative EC 3.5. amidase-type enzyme; putative NAD(P)-binding C-N hydrolase family amidase complement(239419..240189) Escherichia coli str. K-12 substr. MG1655 946585 b0220 CDS ivy NC_000913.3 240343 240816 D inhibitor of vertebrate C-type lysozyme, periplasmic; inhibitor of c-type lysozyme, periplasmic 240343..240816 Escherichia coli str. K-12 substr. MG1655 946530 b0221 CDS fadE NC_000913.3 240859 243303 R acyl coenzyme A dehydrogenase complement(240859..243303) Escherichia coli str. K-12 substr. MG1655 949007 b0222 CDS gmhA NC_000913.3 243543 244121 D phosphoheptose isomerase; D-sedoheptulose 7-phosphate isomerase 243543..244121 Escherichia coli str. K-12 substr. MG1655 949134 b0223 CDS yafJ NC_000913.3 244327 245094 D putative amidotransferase; type 2 glutamine amidotransferase family protein 244327..245094 Escherichia coli str. K-12 substr. MG1655 944906 b0224 CDS yafK NC_000913.3 245065 245805 R L,D-transpeptidase-related protein complement(245065..245805) Escherichia coli str. K-12 substr. MG1655 944910 b0225 CDS yafQ NC_000913.3 245961 246239 R mRNA interferase toxin of toxin-antitoxin pair YafQ/DinJ complement(245961..246239) Escherichia coli str. K-12 substr. MG1655 944911 b0226 CDS dinJ NC_000913.3 246242 246502 R damage-inducible protein J; antitoxin of YafQ-DinJ toxin-antitoxin system complement(246242..246502) Escherichia coli str. K-12 substr. MG1655 944914 b0227 CDS yafL NC_000913.3 246712 247461 D putative lipoprotein; putative lipoprotein and C40 family peptidase 246712..247461 Escherichia coli str. K-12 substr. MG1655 944899 b0228 CDS rayT NC_000913.3 247637 248134 D RAYT REP element-mobilizing transposase; TnpA(REP) 247637..248134 Escherichia coli str. K-12 substr. MG1655 944913 b0229 CDS lfhA NC_000913.3 248358 250070 R pseudogene, flagellar system protein, promoterless fragment; flagellar biosynthesis; <NA> complement(248358..250070) Escherichia coli str. K-12 substr. MG1655 944908 b0230 CDS lafU NC_000913.3 250072 250827 D pseudogene, lateral flagellar motor protein fragment; <NA> 250072..250827 Escherichia coli str. K-12 substr. MG1655 944921 b0231 CDS dinB NC_000913.3 250898 251953 D DNA polymerase IV; DNA polymerase IV, devoid of proofreading, damage-inducible protein P; DNA polymerase IV 250898..251953 Escherichia coli str. K-12 substr. MG1655 944922 b0232 CDS yafN NC_000913.3 252005 252298 D antitoxin of the YafO-YafN toxin-antitoxin system 252005..252298 Escherichia coli str. K-12 substr. MG1655 944920 b0233 CDS yafO NC_000913.3 252301 252699 D mRNA interferase toxin of the YafO-YafN toxin-antitoxin system 252301..252699 Escherichia coli str. K-12 substr. MG1655 944916 b0234 CDS yafP NC_000913.3 252709 253161 D GNAT family putative N-acetyltransferase 252709..253161 Escherichia coli str. K-12 substr. MG1655 944912 b0235 CDS ykfJ NC_000913.3 253479 253685 D pseudogene; <NA> 253479..253685 Escherichia coli str. K-12 substr. MG1655 944924 b0236 CDS prfH NC_000913.3 253702 254202 D pseudogene, RF-1 domain family; probable peptide chain release factor; <NA> 253702..254202 Escherichia coli str. K-12 substr. MG1655 947374 b0237 CDS pepD NC_000913.3 254259 255716 R aminoacyl-histidine dipeptidase (peptidase D) complement(254259..255716) Escherichia coli str. K-12 substr. MG1655 945013 b0238 CDS gpt NC_000913.3 255977 256435 D xanthine phosphoribosyltransferase; xanthine-guanine phosphoribosyltransferase 255977..256435 Escherichia coli str. K-12 substr. MG1655 944817 b0239 CDS frsA NC_000913.3 256527 257771 D fermentation-respiration switch protein; PTS Enzyme IIA(Glc)-binding protein; pNP-butyrate esterase activity 256527..257771 Escherichia coli str. K-12 substr. MG1655 946039 b0240 CDS crl NC_000913.3 257829 259006 D pseudogene, sigma factor-binding protein, RNA polymerase holoenzyme formation stimulator;regulator; Surface structures; transcriptional regulator of cryptic csgA gene for curli surface fibers; <NA> join(257829..257899,258676..259006) Escherichia coli str. K-12 substr. MG1655 945077 b0241 CDS phoE NC_000913.3 259045 260100 R outer membrane pore protein E (E,Ic,NmpAB); outer membrane phosphoporin protein E complement(259045..260100) Escherichia coli str. K-12 substr. MG1655 944926 b0242 CDS proB NC_000913.3 260388 261491 D gamma-glutamate kinase 260388..261491 Escherichia coli str. K-12 substr. MG1655 946425 b0243 CDS proA NC_000913.3 261503 262756 D gamma-glutamylphosphate reductase 261503..262756 Escherichia coli str. K-12 substr. MG1655 946680 b4626 CDS ykfN NC_000913.3 263150 263212 R pseudogene, YdiA family; <NA> complement(263150..263212) Escherichia coli str. K-12 substr. MG1655 5625552 b0245 CDS ykfI NC_000913.3 263328 263669 R CP4-6 prophage; toxin of the YkfI-YafW toxin-antitoxin system complement(263328..263669) Escherichia coli str. K-12 substr. MG1655 946726 b0246 CDS yafW NC_000913.3 263690 264007 R CP4-6 prophage; antitoxin of the YkfI-YafW toxin-antitoxin system complement(263690..264007) Escherichia coli str. K-12 substr. MG1655 944929 b4504 CDS ykfH NC_000913.3 264026 264247 R uncharacterized protein complement(264026..264247) Escherichia coli str. K-12 substr. MG1655 1450236 b0247 CDS ykfG NC_000913.3 264256 264732 R putative DNA repair protein; CP4-6 prophage; RadC-like JAB domain protein complement(264256..264732) Escherichia coli str. K-12 substr. MG1655 944930 b0248 CDS yafX NC_000913.3 264748 265206 R CP4-6 prophage; uncharacterized protein complement(264748..265206) Escherichia coli str. K-12 substr. MG1655 944931 b0249 CDS ykfF NC_000913.3 265304 265543 R CP4-6 prophage; uncharacterized protein complement(265304..265543) Escherichia coli str. K-12 substr. MG1655 948839 b0250 CDS ykfB NC_000913.3 265620 266087 R CP4-6 prophage; uncharacterized protein complement(265620..266087) Escherichia coli str. K-12 substr. MG1655 946846 b0251 CDS yafY NC_000913.3 266110 266553 R hypothetical transcriptional regulator; lipoprotein, inner membrane; degP regulator; CP4-6 prophage complement(266110..266553) Escherichia coli str. K-12 substr. MG1655 944934 b4627 CDS ykfL NC_000913.3 266553 266774 R pseudogene, CP4-6 putative prophage remnant;Phage or Prophage Related; <NA> complement(266553..266774) Escherichia coli str. K-12 substr. MG1655 5625553 b4628 CDS ykfK NC_000913.3 266776 266967 R CP4-6 prophage; putative DNA-binding transcriptional regulator;Phage or Prophage Related; <NA> complement(266776..266967) Escherichia coli str. K-12 substr. MG1655 5625554 b0252 CDS yafZ NC_000913.3 267184 268005 R CP4-6 prophage; conserved protein complement(267184..268005) Escherichia coli str. K-12 substr. MG1655 945373 b0253 CDS ykfA NC_000913.3 268097 268960 R putative GTP-binding protein; CP4-6 prophage; putative GTP-binding protein complement(268097..268960) Escherichia coli str. K-12 substr. MG1655 949004 b0254 CDS perR NC_000913.3 269289 270182 R peroxide resistance protein; CP4-6 prophage; putative DNA-binding transcriptional regulator complement(269289..270182) Escherichia coli str. K-12 substr. MG1655 945417 b4587 CDS insN NC_000913.3 270278 272189 D pseudogene, IS911 transposase A;IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related; <NA> join(270278..270535,271764..272189) Escherichia coli str. K-12 substr. MG1655 5061501 b0256 CDS insI1 NC_000913.3 270603 271754 D IS30 transposase 270603..271754 Escherichia coli str. K-12 substr. MG1655 949005 b0258 CDS ykfC NC_000913.3 272847 273954 D CP4-6 prophage; conserved protein;Phage or Prophage Related; <NA> 272847..273954 Escherichia coli str. K-12 substr. MG1655 944940 b0259 CDS insH1 NC_000913.3 274101 275117 R IS5 transposase and trans-activator complement(274101..275117) Escherichia coli str. K-12 substr. MG1655 944941 b0260 CDS mmuP NC_000913.3 275325 276728 D CP4-6 prophage; putative S-methylmethionine transporter 275325..276728 Escherichia coli str. K-12 substr. MG1655 946284 b0261 CDS mmuM NC_000913.3 276715 277647 D CP4-6 prophage; S-methylmethionine:homocysteine methyltransferase 276715..277647 Escherichia coli str. K-12 substr. MG1655 946143 b0262 CDS afuC NC_000913.3 277756 278802 R putative ATP-binding component of a transport system; CP4-6 prophage; putative ferric transporter subunit complement(277756..278802) Escherichia coli str. K-12 substr. MG1655 947676 b0263 CDS afuB NC_000913.3 278814 279161 R pseudogene, CP4-6 prophage; ferric iron ABC transporter permease gene fragment;Phage or Prophage Related; <NA> complement(278814..279161) Escherichia coli str. K-12 substr. MG1655 947073 b0264 CDS insB1 NC_000913.3 279178 279681 R IS1 transposase B complement(279178..279681) Escherichia coli str. K-12 substr. MG1655 947698 b0265 CDS insA NC_000913.3 279600 279875 R IS1 repressor TnpA complement(279600..279875) Escherichia coli str. K-12 substr. MG1655 944946 b4708 CDS insI1 NC_000913.3 279931 280104 D IS30 transposase;IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related; <NA> 279931..280104 Escherichia coli str. K-12 substr. MG1655 14678508 b4505 CDS insX NC_000913.3 280114 280362 R pseudogene, IS3 family transposase family; <NA> complement(280114..280362) Escherichia coli str. K-12 substr. MG1655 1450237 b0266 CDS yagB NC_000913.3 280427 280735 R pseudogene, CP4-6 prophage;Phage or Prophage Related; <NA> complement(280427..280735) Escherichia coli str. K-12 substr. MG1655 944944 b0267 CDS yagA NC_000913.3 280829 281983 R CP4-6 prophage; putative DNA-binding transcriptional regulator complement(280829..281983) Escherichia coli str. K-12 substr. MG1655 944937 b0268 CDS yagE NC_000913.3 282278 283186 D putative lyase/synthase; 2-keto-3-deoxy gluconate (KDG) aldolase; CP4-6 prophage 282278..283186 Escherichia coli str. K-12 substr. MG1655 944925 b0269 CDS yagF NC_000913.3 283201 285168 D putative dehydratase; CP4-6 prophage; dehydratase family protein 283201..285168 Escherichia coli str. K-12 substr. MG1655 944928 b0270 CDS yagG NC_000913.3 285395 286777 D putative permease; CP4-6 prophage; putative sugar transporter 285395..286777 Escherichia coli str. K-12 substr. MG1655 944947 b0271 CDS yagH NC_000913.3 286789 288399 D putative beta-xylosidase; CP4-6 prophage; putative xylosidase/arabinosidase 286789..288399 Escherichia coli str. K-12 substr. MG1655 944949 b0272 CDS yagI NC_000913.3 288404 289162 R putative regulator; CP4-6 prophage; putative DNA-binding transcriptional regulator complement(288404..289162) Escherichia coli str. K-12 substr. MG1655 945016 b0273 CDS argF NC_000913.3 289301 290305 R ornithine carbamoyltransferase 2, chain F; ornithine carbamoyltransferase 2, chain F; CP4-6 prophage complement(289301..290305) Escherichia coli str. K-12 substr. MG1655 944844 b4688 CDS ykgS NC_000913.3 290429 290633 D pseudogene; <NA> 290429..290633 Escherichia coli str. K-12 substr. MG1655 7751632 b0274 CDS insB1 NC_000913.3 290649 291152 R IS1 transposase B complement(290649..291152) Escherichia coli str. K-12 substr. MG1655 944950 b0275 CDS insA NC_000913.3 291071 291346 R IS1 repressor TnpA complement(291071..291346) Escherichia coli str. K-12 substr. MG1655 944951 b0276 CDS yagJ NC_000913.3 291404 292231 D CP4-6 prophage; uncharacterized protein;Phage or Prophage Related; <NA> 291404..292231 Escherichia coli str. K-12 substr. MG1655 949094 b0277 CDS yagK NC_000913.3 292322 292948 R CP4-6 prophage; conserved protein complement(292322..292948) Escherichia coli str. K-12 substr. MG1655 945847 b0278 CDS yagL NC_000913.3 293220 293918 R DNA-binding protein; CP4-6 prophage; DNA-binding protein complement(293220..293918) Escherichia coli str. K-12 substr. MG1655 945845 b0279 CDS yagM NC_000913.3 293945 294799 R CP4-6 prophage; uncharacterized protein complement(293945..294799) Escherichia coli str. K-12 substr. MG1655 944959 b0280 CDS yagN NC_000913.3 295139 295579 R CP4-6 prophage; uncharacterized protein complement(295139..295579) Escherichia coli str. K-12 substr. MG1655 945349 b0281 CDS intF NC_000913.3 295696 297096 R putative phage integrase; CP4-6 prophage; putative phage integrase complement(295696..297096) Escherichia coli str. K-12 substr. MG1655 947351 b4694 CDS yagP NC_000913.3 297381 297719 R pseudogene, LysR family, fragment;putative regulator; Not classified; putative transcriptional regulator LYSR-type; <NA> complement(297381..297719) Escherichia coli str. K-12 substr. MG1655 7751633 b4695 CDS ykgT NC_000913.3 297714 297791 R pseudogene, MobA-related; <NA> complement(297714..297791) Escherichia coli str. K-12 substr. MG1655 7751634 b0283 CDS paoD NC_000913.3 297770 298726 R moco insertion factor for PaoABC aldehyde oxidoreductase complement(297770..298726) Escherichia coli str. K-12 substr. MG1655 945010 b0284 CDS paoC NC_000913.3 298736 300934 R PaoABC aldehyde oxidoreductase, Moco-containing subunit complement(298736..300934) Escherichia coli str. K-12 substr. MG1655 944961 b0285 CDS paoB NC_000913.3 300931 301887 R PaoABC aldehyde oxidoreductase, FAD-containing subunit complement(300931..301887) Escherichia coli str. K-12 substr. MG1655 945710 b0286 CDS paoA NC_000913.3 301884 302573 R putative xanthine dehydrogenase; PaoABC aldehyde oxidoreductase, 2Fe-2S subunit complement(301884..302573) Escherichia coli str. K-12 substr. MG1655 945330 b0287 CDS yagU NC_000913.3 302991 303605 D DUF1440 family inner membrane acid resistance protein 302991..303605 Escherichia coli str. K-12 substr. MG1655 945677 b0288 CDS ykgJ NC_000913.3 303853 304182 R putative ferredoxin; UPF0153 cysteine cluster protein complement(303853..304182) Escherichia coli str. K-12 substr. MG1655 945905 b0289 CDS ecpE NC_000913.3 304495 305205 R ECP production pilus chaperone complement(304495..305205) Escherichia coli str. K-12 substr. MG1655 946631 b0290 CDS ecpD NC_000913.3 305174 306817 R putative receptor; polymerized tip adhesin of ECP fibers complement(305174..306817) Escherichia coli str. K-12 substr. MG1655 947349 b0291 CDS ecpC NC_000913.3 306807 309332 R putative enzyme; ECP production outer membrane protein complement(306807..309332) Escherichia coli str. K-12 substr. MG1655 947606 b0292 CDS ecpB NC_000913.3 309358 310026 R ECP production pilus chaperone complement(309358..310026) Escherichia coli str. K-12 substr. MG1655 948806 b0293 CDS ecpA NC_000913.3 310084 310671 R ECP pilin complement(310084..310671) Escherichia coli str. K-12 substr. MG1655 948759 b0294 CDS ecpR NC_000913.3 310746 311336 R putative regulator; putative transcriptional regulator for the ecp operon complement(310746..311336) Escherichia coli str. K-12 substr. MG1655 944966 b0295 CDS ykgL NC_000913.3 312112 312339 D uncharacterized protein 312112..312339 Escherichia coli str. K-12 substr. MG1655 944962 b4506 CDS ykgO NC_000913.3 312374 312514 R RpmJ-like protein complement(312374..312514) Escherichia coli str. K-12 substr. MG1655 1450238 b0296 CDS ykgM NC_000913.3 312514 312777 R 50S ribosomal protein L31 type B; alternative zinc-limitation L31 protein complement(312514..312777) Escherichia coli str. K-12 substr. MG1655 944960 b4671 CDS ykgR NC_000913.3 313141 313242 R uncharacterized protein complement(313141..313242) Escherichia coli str. K-12 substr. MG1655 7751635 b4630 CDS ykgP NC_000913.3 313716 313805 R pseudogene, oxidoreductase family; <NA> complement(313716..313805) Escherichia coli str. K-12 substr. MG1655 5625556 b0297 CDS eaeH NC_000913.3 314357 315228 D pseudogene, attaching and effacing protein homology;factor; Not classified; <NA> 314357..315228 Escherichia coli str. K-12 substr. MG1655 944957 b0298 CDS insE1 NC_000913.3 315291 315590 D IS3 transposase A 315291..315590 Escherichia coli str. K-12 substr. MG1655 944952 b0299 CDS insF1 NC_000913.3 315587 316453 D IS3 transposase B 315587..316453 Escherichia coli str. K-12 substr. MG1655 944948 b0300 CDS ykgA NC_000913.3 316486 317169 R pseudogene, AraC family;putative regulator; Not classified; putative ARAC-type regulatory protein; <NA> complement(316486..317169) Escherichia coli str. K-12 substr. MG1655 944956 b4631 CDS ykgQ NC_000913.3 317439 317567 D pseudogene, putative dehydrogenase; <NA> 317439..317567 Escherichia coli str. K-12 substr. MG1655 5625557 b0301 CDS rclC NC_000913.3 317726 318319 R reactive chlorine species (RCS) stress resistance inner membrane protein complement(317726..318319) Escherichia coli str. K-12 substr. MG1655 944974 b0303 CDS rclB NC_000913.3 318331 318567 R the overlapping ORF b0302 on the opposite strand is no longer thought to be an actual gene, and has been deaccessioned; reactive chlorine species (RCS) stress resistance periplasmic protein complement(318331..318567) Escherichia coli str. K-12 substr. MG1655 945658 b0304 CDS rclA NC_000913.3 318676 320001 R putative oxidoreductase; reactive chlorine stress species (RCS) resistance protein; pyridine nucleotide-dependent disulfide oxidoreductase family complement(318676..320001) Escherichia coli str. K-12 substr. MG1655 946092 b0305 CDS rclR NC_000913.3 320227 321081 D putative ARAC-type regulatory protein; reactive chlorine species (RCS)-specific activator of the rcl genes 320227..321081 Escherichia coli str. K-12 substr. MG1655 945616 b0306 CDS ykgE NC_000913.3 321608 322327 D putative dehydrogenase subunit; cysteine-rich LutA family protein; putative electron transport chain YkgEFG component 321608..322327 Escherichia coli str. K-12 substr. MG1655 948438 b0307 CDS ykgF NC_000913.3 322338 323765 D ferridoxin-like LutB family protein; putative electron transport chain YkgEFG component 322338..323765 Escherichia coli str. K-12 substr. MG1655 944980 b0308 CDS ykgG NC_000913.3 323758 324453 D putative transporter; LutC family protein; putative electron transport chain YkgEFG component 323758..324453 Escherichia coli str. K-12 substr. MG1655 945906 b0310 CDS ykgH NC_000913.3 324696 325364 R putative inner membrane protein complement(324696..325364) Escherichia coli str. K-12 substr. MG1655 947513 b0311 CDS betA NC_000913.3 325577 327247 R choline dehydrogenase, a flavoprotein complement(325577..327247) Escherichia coli str. K-12 substr. MG1655 945716 b0312 CDS betB NC_000913.3 327261 328733 R NAD+-dependent betaine aldehyde dehydrogenase; betaine aldehyde dehydrogenase, NAD-dependent complement(327261..328733) Escherichia coli str. K-12 substr. MG1655 947376 b0313 CDS betI NC_000913.3 328747 329334 R probably transcriptional repressor of bet genes; choline-inducible betIBA-betT divergent operon transcriptional repressor complement(328747..329334) Escherichia coli str. K-12 substr. MG1655 944981 b0314 CDS betT NC_000913.3 329463 331496 D high-affinity choline transport; choline transporter of high affinity 329463..331496 Escherichia coli str. K-12 substr. MG1655 945079 b0315 CDS yahA NC_000913.3 332371 333459 D c-di-GMP-specific phosphodiesterase 332371..333459 Escherichia coli str. K-12 substr. MG1655 947459 b0316 CDS yahB NC_000913.3 333501 334433 R putative transcriptional regulator LYSR-type; putative DNA-bindng transcriptional regulator complement(333501..334433) Escherichia coli str. K-12 substr. MG1655 945278 b0317 CDS yahC NC_000913.3 334525 335022 R putative inner membrane protein complement(334525..335022) Escherichia coli str. K-12 substr. MG1655 947337 b0318 CDS yahD NC_000913.3 335280 335885 D putative transcription factor; ankyrin repeat protein 335280..335885 Escherichia coli str. K-12 substr. MG1655 947681 b0319 CDS yahE NC_000913.3 335925 336788 D DUF2877 family protein 335925..336788 Escherichia coli str. K-12 substr. MG1655 947134 b0320 CDS yahF NC_000913.3 336778 338325 D putative oxidoreductase subunit; putative NAD(P)-binding succinyl-CoA synthase 336778..338325 Escherichia coli str. K-12 substr. MG1655 947298 b0321 CDS yahG NC_000913.3 338325 339743 D DUF1116 family protein 338325..339743 Escherichia coli str. K-12 substr. MG1655 945379 b0323 CDS yahI NC_000913.3 340165 341115 D putative kinase; carbamate kinase-like protein 340165..341115 Escherichia coli str. K-12 substr. MG1655 944984 b0324 CDS yahJ NC_000913.3 341125 342507 D putative deaminase; putative metallo-dependent hydrolase domain deaminase 341125..342507 Escherichia coli str. K-12 substr. MG1655 944976 b0325 CDS yahK NC_000913.3 342884 343933 D putative oxidoreductase; broad specificity NADPH-dependent aldehyde reductase, Zn-containing 342884..343933 Escherichia coli str. K-12 substr. MG1655 944975 b0326 CDS yahL NC_000913.3 344176 344991 D uncharacterized protein 344176..344991 Escherichia coli str. K-12 substr. MG1655 944970 b0327 CDS yahM NC_000913.3 345404 345649 D uncharacterized protein 345404..345649 Escherichia coli str. K-12 substr. MG1655 944969 b0328 CDS yahN NC_000913.3 345666 346337 R putative cytochrome subunit of dehydrogenase; amino acid exporter for proline, lysine, glutamate, homoserine complement(345666..346337) Escherichia coli str. K-12 substr. MG1655 944968 b0329 CDS yahO NC_000913.3 346484 346759 D periplasmic protein, function unknown, YhcN family 346484..346759 Escherichia coli str. K-12 substr. MG1655 944985 b0330 CDS prpR NC_000913.3 346857 348443 R regulator for prp operon; propionate catabolism operon regulatory protein complement(346857..348443) Escherichia coli str. K-12 substr. MG1655 944987 b0331 CDS prpB NC_000913.3 348682 349572 D putative phosphonomutase 2; 2-methylisocitrate lyase 348682..349572 Escherichia coli str. K-12 substr. MG1655 944990 b0333 CDS prpC NC_000913.3 350012 351181 D putative citrate synthase; propionate metabolism?; 2-methylcitrate synthase 350012..351181 Escherichia coli str. K-12 substr. MG1655 947528 b0334 CDS prpD NC_000913.3 351215 352666 D 2-methylcitrate dehydratase 351215..352666 Escherichia coli str. K-12 substr. MG1655 945931 b0335 CDS prpE NC_000913.3 352706 354592 D putative propionyl-CoA synthetase; propionate--CoA ligase 352706..354592 Escherichia coli str. K-12 substr. MG1655 946891 b0336 CDS codB NC_000913.3 354922 356181 D cytosine permease/transport; cytosine transporter 354922..356181 Escherichia coli str. K-12 substr. MG1655 944994 b0337 CDS codA NC_000913.3 356171 357454 D cytosine/isoguanine deaminase 356171..357454 Escherichia coli str. K-12 substr. MG1655 944996 b0338 CDS cynR NC_000913.3 357791 358690 R cyn operon positive regulator; transcriptional activator of cyn operon; autorepressor complement(357791..358690) Escherichia coli str. K-12 substr. MG1655 945001 b0339 CDS cynT NC_000913.3 358799 359458 D carbonic anhydrase 358799..359458 Escherichia coli str. K-12 substr. MG1655 946548 b0340 CDS cynS NC_000913.3 359489 359959 D cyanate aminohydrolase, cyanase; cyanate aminohydrolase 359489..359959 Escherichia coli str. K-12 substr. MG1655 948998 b0341 CDS cynX NC_000913.3 359992 361146 D cyanate transport; putative cyanate transporter 359992..361146 Escherichia coli str. K-12 substr. MG1655 946770 b0342 CDS lacA NC_000913.3 361249 361860 R thiogalactoside acetyltransferase complement(361249..361860) Escherichia coli str. K-12 substr. MG1655 945674 b0343 CDS lacY NC_000913.3 361926 363179 R galactoside permease (lactose permease, M protein) (MFS family); lactose permease complement(361926..363179) Escherichia coli str. K-12 substr. MG1655 949083 b0344 CDS lacZ NC_000913.3 363231 366305 R beta-D-galactosidase complement(363231..366305) Escherichia coli str. K-12 substr. MG1655 945006 b0345 CDS lacI NC_000913.3 366428 367510 R transcriptional repressor of the lac operon; lactose-inducible lac operon transcriptional repressor complement(366428..367510) Escherichia coli str. K-12 substr. MG1655 945007 b0346 CDS mhpR NC_000913.3 367587 368420 R transcriptional regulator for mhp operon; mhp operon transcriptional activator complement(367587..368420) Escherichia coli str. K-12 substr. MG1655 945938 b0347 CDS mhpA NC_000913.3 368611 370275 D 3-(3-hydroxyphenyl)propionate hydroxylase 368611..370275 Escherichia coli str. K-12 substr. MG1655 945197 b0348 CDS mhpB NC_000913.3 370277 371221 D 2,3-dihydroxyphenylpropionate 1,2-dioxygenase 370277..371221 Escherichia coli str. K-12 substr. MG1655 945047 b0349 CDS mhpC NC_000913.3 371239 372105 D 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase 371239..372105 Escherichia coli str. K-12 substr. MG1655 944954 b0350 CDS mhpD NC_000913.3 372115 372924 D 2-keto-4-pentenoate hydratase 372115..372924 Escherichia coli str. K-12 substr. MG1655 944768 b0351 CDS mhpF NC_000913.3 372921 373871 D acetaldehyde dehydrogenase; acetaldehyde-CoA dehydrogenase II, NAD-binding 372921..373871 Escherichia coli str. K-12 substr. MG1655 945008 b0352 CDS mhpE NC_000913.3 373868 374881 D 4-hydroxy-2-ketovalerate aldolase; 4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase, class I 373868..374881 Escherichia coli str. K-12 substr. MG1655 945012 b0353 CDS mhpT NC_000913.3 375459 376670 D putative transport protein; 3-hydroxyphenylpropionic transporter 375459..376670 Escherichia coli str. K-12 substr. MG1655 944997 b0354 CDS yaiL NC_000913.3 376772 377311 D DUF2058 family protein 376772..377311 Escherichia coli str. K-12 substr. MG1655 944993 b0355 CDS frmB NC_000913.3 377535 378368 R putative S-formylglutathione hydrolase; S-formylglutathione hydrolase complement(377535..378368) Escherichia coli str. K-12 substr. MG1655 944991 b0356 CDS frmA NC_000913.3 378462 379571 R alcohol dehydrogenase class III; formaldehyde dehydrogenase, glutathione-dependent; alcohol dehydrogenase class III; glutathione-dependent formaldehyde dehydrogenase complement(378462..379571) Escherichia coli str. K-12 substr. MG1655 944988 b0357 CDS frmR NC_000913.3 379606 379881 R repressor of frmRAB; regulator protein that represses frmRAB operon complement(379606..379881) Escherichia coli str. K-12 substr. MG1655 944986 b0358 CDS yaiO NC_000913.3 380069 380842 R outer membrane protein complement(380069..380842) Escherichia coli str. K-12 substr. MG1655 945014 b4579 CDS yaiX NC_000913.3 380844 382872 R pseudogene, interrupted by IS2A; hexapeptide transferase superfamily; putative transferase; <NA> complement(join(380844..381260,382591..382872)) Escherichia coli str. K-12 substr. MG1655 4056039 b0360 CDS insC1 NC_000913.3 381351 381716 D IS2 repressor TnpA 381351..381716 Escherichia coli str. K-12 substr. MG1655 945025 b0361 CDS insD1 NC_000913.3 381674 382579 D IS2 transposase TnpB 381674..382579 Escherichia coli str. K-12 substr. MG1655 945203 b0363 CDS yaiP NC_000913.3 382739 383935 R polysaccharide metabolism; putative family 2 glycosyltransferase complement(382739..383935) Escherichia coli str. K-12 substr. MG1655 945308 b0364 CDS yaiS NC_000913.3 384059 384616 R putative PIG-L family deacetylase complement(384059..384616) Escherichia coli str. K-12 substr. MG1655 946967 b0365 CDS tauA NC_000913.3 385232 386194 D taurine transport system periplasmic protein; taurine ABC transporter periplasmic binding protein 385232..386194 Escherichia coli str. K-12 substr. MG1655 945030 b0366 CDS tauB NC_000913.3 386207 386974 D taurine ATP-binding component of a transport system; taurine ABC transporter ATPase 386207..386974 Escherichia coli str. K-12 substr. MG1655 945027 b0367 CDS tauC NC_000913.3 386971 387798 D taurine transport system permease protein; taurine ABC transporter permease 386971..387798 Escherichia coli str. K-12 substr. MG1655 945026 b0368 CDS tauD NC_000913.3 387795 388646 D taurine dioxygenase, 2-oxoglutarate-dependent 387795..388646 Escherichia coli str. K-12 substr. MG1655 945021 b0369 CDS hemB NC_000913.3 388753 389727 R 5-aminolevulinate dehydratase = porphobilinogen synthase; 5-aminolevulinate dehydratase (porphobilinogen synthase) complement(388753..389727) Escherichia coli str. K-12 substr. MG1655 945017 b4580 CDS yaiT NC_000913.3 390251 394418 D pseudogene, autotransporter family;putative structure; Not classified; interrupted by IS3; putative flagellin structural protein; <NA> join(390251..391708,392970..394418) Escherichia coli str. K-12 substr. MG1655 4056040 b0372 CDS insF1 NC_000913.3 391739 392605 R IS3 transposase B complement(391739..392605) Escherichia coli str. K-12 substr. MG1655 945036 b0373 CDS insE1 NC_000913.3 392602 392901 R IS3 transposase A complement(392602..392901) Escherichia coli str. K-12 substr. MG1655 946900 b0375 CDS yaiV NC_000913.3 394506 395129 D putative transcriptional regulator 394506..395129 Escherichia coli str. K-12 substr. MG1655 946902 b0376 CDS ampH NC_000913.3 395130 396287 R D-alanyl-D-alanine- carboxypeptidase/endopeptidase; penicillin-binding protein; weak beta-lactamase complement(395130..396287) Escherichia coli str. K-12 substr. MG1655 946904 b0377 CDS sbmA NC_000913.3 396639 397859 D sensitivity to microcin B17, possibly envelop protein; peptide antibiotic transporter 396639..397859 Escherichia coli str. K-12 substr. MG1655 946884 b0378 CDS yaiW NC_000913.3 397872 398966 D microcin Bac7 uptake protein; outer membrane surface-exposed lipoprotein 397872..398966 Escherichia coli str. K-12 substr. MG1655 945038 b0379 CDS yaiY NC_000913.3 399025 399333 R DUF2755 family inner membrane protein complement(399025..399333) Escherichia coli str. K-12 substr. MG1655 945223 b0380 CDS yaiZ NC_000913.3 399593 399805 D DUF2754 family putative inner membrane protein 399593..399805 Escherichia coli str. K-12 substr. MG1655 947355 b0381 CDS ddlA NC_000913.3 399829 400923 R D-alanine-D-alanine ligase A complement(399829..400923) Escherichia coli str. K-12 substr. MG1655 945313 b0382 CDS iraP NC_000913.3 401386 401646 D anti-RssB factor, RpoS stabilzer during Pi starvation; anti-adapter protein 401386..401646 Escherichia coli str. K-12 substr. MG1655 947709 b0383 CDS phoA NC_000913.3 401747 403162 D alkaline phosphatase; start codon corrected; bacterial alkaline phosphatase 401747..403162 Escherichia coli str. K-12 substr. MG1655 945041 b0384 CDS psiF NC_000913.3 403281 403601 D induced by phosphate starvation; PsiF family protein 403281..403601 Escherichia coli str. K-12 substr. MG1655 945040 b0385 CDS yaiC NC_000913.3 403703 404818 D diguanylate cyclase, cellulose regualtor 403703..404818 Escherichia coli str. K-12 substr. MG1655 945037 b0386 CDS proC NC_000913.3 404835 405644 R pyrroline-5-carboxylate reductase; pyrroline-5-carboxylate reductase, NAD(P)-binding complement(404835..405644) Escherichia coli str. K-12 substr. MG1655 945034 b0387 CDS yaiI NC_000913.3 405764 406222 D UPF0178 family protein 405764..406222 Escherichia coli str. K-12 substr. MG1655 945033 b0388 CDS aroL NC_000913.3 406405 406929 D shikimate kinase II 406405..406929 Escherichia coli str. K-12 substr. MG1655 945031 b0389 CDS yaiA NC_000913.3 406979 407170 D OxyR-regulated conserved protein 406979..407170 Escherichia coli str. K-12 substr. MG1655 945043 b0390 CDS aroM NC_000913.3 407428 408105 D protein of aro operon, regulated by aroR; AroM family protein 407428..408105 Escherichia coli str. K-12 substr. MG1655 945045 b0391 CDS yaiE NC_000913.3 408177 408461 D UPF0345 family protein 408177..408461 Escherichia coli str. K-12 substr. MG1655 945048 b0392 CDS ykiA NC_000913.3 408609 408950 D pseudogene; <NA> 408609..408950 Escherichia coli str. K-12 substr. MG1655 945423 b0393 CDS rdgC NC_000913.3 409108 410019 R nucleoid-associated ssDNA and dsDNA binding protein; competitive inhibitor of RecA function complement(409108..410019) Escherichia coli str. K-12 substr. MG1655 948585 b0394 CDS mak NC_000913.3 410144 411052 D possible NAGC-like transcriptional regulator; manno(fructo)kinase 410144..411052 Escherichia coli str. K-12 substr. MG1655 949086 b0396 CDS araJ NC_000913.3 411297 412481 R involved in either transport or processing of arabinose polymers; L-arabinose-inducible putative transporter, MFS family complement(411297..412481) Escherichia coli str. K-12 substr. MG1655 949077 b0397 CDS sbcC NC_000913.3 412607 415753 R ATP-dependent dsDNA exonuclease; exonuclease, dsDNA, ATP-dependent complement(412607..415753) Escherichia coli str. K-12 substr. MG1655 949076 b0398 CDS sbcD NC_000913.3 415750 416952 R ATP-dependent dsDNA exonuclease; exonuclease, dsDNA, ATP-dependent complement(415750..416952) Escherichia coli str. K-12 substr. MG1655 945049 b0399 CDS phoB NC_000913.3 417142 417831 D positive response regulator for pho regulon, sensor is PhoR (or CreC); response regulator in two-component regulatory system with PhoR 417142..417831 Escherichia coli str. K-12 substr. MG1655 945046 b0400 CDS phoR NC_000913.3 417889 419184 D positive and negative sensor protein for pho regulon; sensory histidine kinase in two-component regulatory system with PhoB 417889..419184 Escherichia coli str. K-12 substr. MG1655 945044 b0401 CDS brnQ NC_000913.3 419591 420910 D branched chain amino acid transport system II carrier protein; branched-chain amino acid transport system 2 carrier protein; LIV-II transport system for Ile, Leu, and Val 419591..420910 Escherichia coli str. K-12 substr. MG1655 945042 b0402 CDS proY NC_000913.3 420986 422359 D proline permease transport protein; proline-specific permease 420986..422359 Escherichia coli str. K-12 substr. MG1655 945050 b0403 CDS malZ NC_000913.3 422518 424332 D maltodextrin glucosidase 422518..424332 Escherichia coli str. K-12 substr. MG1655 949131 b0404 CDS acpH NC_000913.3 424337 424918 R putative glycoprotein; acyl carrier protein (ACP) phosphodiesterase; ACP hydrolyase complement(424337..424918) Escherichia coli str. K-12 substr. MG1655 949132 b0405 CDS queA NC_000913.3 425011 426081 D synthesis of queuine in tRNA; probably S-adenosylmethionine:tRNA ribosyltransferase-isomerase; S-adenosylmethionine:tRNA ribosyltransferase-isomerase 425011..426081 Escherichia coli str. K-12 substr. MG1655 944905 b0406 CDS tgt NC_000913.3 426137 427264 D tRNA-guanine transglycosylase 426137..427264 Escherichia coli str. K-12 substr. MG1655 949130 b0407 CDS yajC NC_000913.3 427287 427619 D SecYEG protein translocase auxillary subunit 427287..427619 Escherichia coli str. K-12 substr. MG1655 945374 b0408 CDS secD NC_000913.3 427647 429494 D protein secretion; membrane protein, part of the channel; SecYEG protein translocase auxillary subunit 427647..429494 Escherichia coli str. K-12 substr. MG1655 949133 b0409 CDS secF NC_000913.3 429505 430476 D protein secretion, membrane protein; SecYEG protein translocase auxillary subunit 429505..430476 Escherichia coli str. K-12 substr. MG1655 949120 b0410 CDS yajD NC_000913.3 430605 430952 D HNH nuclease family protein 430605..430952 Escherichia coli str. K-12 substr. MG1655 945051 b0411 CDS tsx NC_000913.3 431129 432013 R nucleoside channel; receptor of phage T6 and colicin K; nucleoside channel, receptor of phage T6 and colicin K complement(431129..432013) Escherichia coli str. K-12 substr. MG1655 946242 b0412 CDS yajI NC_000913.3 432312 432851 R putative lipoprotein complement(432312..432851) Escherichia coli str. K-12 substr. MG1655 947233 b0413 CDS nrdR NC_000913.3 433002 433451 D Nrd regulon repressor 433002..433451 Escherichia coli str. K-12 substr. MG1655 947437 b0414 CDS ribD NC_000913.3 433455 434558 D fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase 433455..434558 Escherichia coli str. K-12 substr. MG1655 945620 b0415 CDS ribE NC_000913.3 434647 435117 D riboflavin synthase, beta chain; riboflavin synthase beta chain 434647..435117 Escherichia coli str. K-12 substr. MG1655 946453 b0416 CDS nusB NC_000913.3 435137 435556 D transcription termination; L factor; transcription antitermination protein 435137..435556 Escherichia coli str. K-12 substr. MG1655 945054 b0417 CDS thiL NC_000913.3 435634 436611 D thiamine monophosphate kinase 435634..436611 Escherichia coli str. K-12 substr. MG1655 947387 b0418 CDS pgpA NC_000913.3 436589 437107 D phosphatidylglycerophosphatase; phosphatidylglycerophosphatase A 436589..437107 Escherichia coli str. K-12 substr. MG1655 947542 b0419 CDS yajO NC_000913.3 437161 438135 R putative NAD(P)H-dependent xylose reductase; 2-carboxybenzaldehyde reductase complement(437161..438135) Escherichia coli str. K-12 substr. MG1655 946903 b0420 CDS dxs NC_000913.3 438315 440177 R 1-deoxyxylulose-5-phosphate synthase; flavoprotein; 1-deoxyxylulose-5-phosphate synthase, thiamine triphosphate-binding, FAD-requiring complement(438315..440177) Escherichia coli str. K-12 substr. MG1655 945060 b0421 CDS ispA NC_000913.3 440202 441101 R geranyltranstransferase complement(440202..441101) Escherichia coli str. K-12 substr. MG1655 945064 b0422 CDS xseB NC_000913.3 441101 441343 R exonuclease VII, small subunit; exonuclease VII small subunit complement(441101..441343) Escherichia coli str. K-12 substr. MG1655 945069 b0423 CDS thiI NC_000913.3 441549 442997 D tRNA s(4)U8 sulfurtransferase 441549..442997 Escherichia coli str. K-12 substr. MG1655 945067 b0424 CDS yajL NC_000913.3 443051 443641 R oxidative-stress-resistance chaperone complement(443051..443641) Escherichia coli str. K-12 substr. MG1655 945066 b0425 CDS panE NC_000913.3 443604 444515 R 2-dehydropantoate 2-reductase; 2-dehydropantoate reductase, NADPH-specific complement(443604..444515) Escherichia coli str. K-12 substr. MG1655 945065 b0426 CDS yajQ NC_000913.3 444683 445174 D phage Phi6 host factor, ATP/GTP binding protein 444683..445174 Escherichia coli str. K-12 substr. MG1655 945063 b0427 CDS yajR NC_000913.3 445302 446666 R putative transport protein; putative transporter complement(445302..446666) Escherichia coli str. K-12 substr. MG1655 945058 b0428 CDS cyoE NC_000913.3 446815 447705 R protoheme IX farnesyltransferase (haeme O biosynthesis); protoheme IX farnesyltransferase complement(446815..447705) Escherichia coli str. K-12 substr. MG1655 945073 b0429 CDS cyoD NC_000913.3 447717 448046 R cytochrome o ubiquinol oxidase subunit IV complement(447717..448046) Escherichia coli str. K-12 substr. MG1655 944918 b0430 CDS cyoC NC_000913.3 448046 448660 R cytochrome o ubiquinol oxidase subunit III complement(448046..448660) Escherichia coli str. K-12 substr. MG1655 946897 b0431 CDS cyoB NC_000913.3 448650 450641 R cytochrome o ubiquinol oxidase subunit I complement(448650..450641) Escherichia coli str. K-12 substr. MG1655 945615 b0432 CDS cyoA NC_000913.3 450663 451610 R cytochrome o ubiquinol oxidase subunit II complement(450663..451610) Escherichia coli str. K-12 substr. MG1655 945080 b0433 CDS ampG NC_000913.3 452070 453545 R regulates beta-lactamase synthesis; muropeptide transporter complement(452070..453545) Escherichia coli str. K-12 substr. MG1655 946438 b0434 CDS yajG NC_000913.3 453589 454167 R putative polymerase/proteinase; putative lipoprotein complement(453589..454167) Escherichia coli str. K-12 substr. MG1655 945521 b0435 CDS bolA NC_000913.3 454472 454789 D possible regulator of murein genes; stationary-phase morphogene, transcriptional repressor for mreB; also regulator for dacA, dacC, and ampC 454472..454789 Escherichia coli str. K-12 substr. MG1655 947043 b0436 CDS tig NC_000913.3 455133 456431 D trigger factor; a molecular chaperone involved in cell division; peptidyl-prolyl cis/trans isomerase (trigger factor) 455133..456431 Escherichia coli str. K-12 substr. MG1655 945081 b0437 CDS clpP NC_000913.3 456677 457300 D ATP-dependent proteolytic subunit of clpA-clpP serine protease, heat shock protein F21.5; proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine proteases 456677..457300 Escherichia coli str. K-12 substr. MG1655 945082 b0438 CDS clpX NC_000913.3 457426 458700 D ATP-dependent specificity component of clpP serine protease, chaperone; ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine protease 457426..458700 Escherichia coli str. K-12 substr. MG1655 945083 b0439 CDS lon NC_000913.3 458888 461242 D DNA-binding, ATP-dependent protease La; heat shock K-protein; DNA-binding ATP-dependent protease La 458888..461242 Escherichia coli str. K-12 substr. MG1655 945085 b0440 CDS hupB NC_000913.3 461451 461723 D DNA-binding protein HU-beta, NS1 (HU-1); HU, DNA-binding transcriptional regulator, beta subunit 461451..461723 Escherichia coli str. K-12 substr. MG1655 949095 b0441 CDS ppiD NC_000913.3 461915 463786 D periplasmic folding chaperone, has an inactive PPIase domain 461915..463786 Escherichia coli str. K-12 substr. MG1655 946056 b0442 CDS ybaV NC_000913.3 463937 464308 D putative competence-suppressing periplasmic helix-hairpin-helix DNA-binding protein 463937..464308 Escherichia coli str. K-12 substr. MG1655 945884 b0443 CDS fadM NC_000913.3 464402 464800 D long-chain acyl-CoA thioesterase III 464402..464800 Escherichia coli str. K-12 substr. MG1655 945812 b0444 CDS queC NC_000913.3 464852 465547 R 7-cyano-7-deazaguanine (preQ0) synthase; queuosine biosynthesis complement(464852..465547) Escherichia coli str. K-12 substr. MG1655 947034 b0445 CDS ybaE NC_000913.3 465612 467312 R putative ABC transporter periplasmic binding protein complement(465612..467312) Escherichia coli str. K-12 substr. MG1655 949093 b0446 CDS cof NC_000913.3 467412 468230 D thiamine pyrimidine pyrophosphate hydrolase; HMP-PP phosphatase 467412..468230 Escherichia coli str. K-12 substr. MG1655 945089 b0447 CDS ybaO NC_000913.3 468383 468841 D putative LRP-like transcriptional regulator; putative DNA-binding transcriptional regulator 468383..468841 Escherichia coli str. K-12 substr. MG1655 945091 b0448 CDS mdlA NC_000913.3 468871 470643 D putative multidrug ABC transporter ATPase 468871..470643 Escherichia coli str. K-12 substr. MG1655 945092 b0449 CDS mdlB NC_000913.3 470636 472417 D putative multidrug ABC transporter ATPase 470636..472417 Escherichia coli str. K-12 substr. MG1655 945088 b0450 CDS glnK NC_000913.3 472598 472936 D nitrogen regulatory protein P-II 2; nitrogen assimilation regulatory protein for GlnL, GlnE, and AmtB 472598..472936 Escherichia coli str. K-12 substr. MG1655 945087 b0451 CDS amtB NC_000913.3 472966 474252 D probable ammonium transporter; ammonium transporter 472966..474252 Escherichia coli str. K-12 substr. MG1655 945084 b0452 CDS tesB NC_000913.3 474301 475161 R acyl-CoA thioesterase 2 complement(474301..475161) Escherichia coli str. K-12 substr. MG1655 945074 b0453 CDS ybaY NC_000913.3 475379 475951 D glycoprotein/polysaccharide metabolism; outer membrane lipoprotein 475379..475951 Escherichia coli str. K-12 substr. MG1655 945070 b0454 CDS ybaZ NC_000913.3 475982 476371 R excision repair protein, alkyltransferase-like protein ATL complement(475982..476371) Escherichia coli str. K-12 substr. MG1655 945094 b0456 CDS ybaA NC_000913.3 476672 477025 D DUF1428 family protein 476672..477025 Escherichia coli str. K-12 substr. MG1655 948863 b0457 CDS ylaB NC_000913.3 477067 478617 R putative membrane-anchored cyclic-di-GMP phosphodiesterase complement(477067..478617) Escherichia coli str. K-12 substr. MG1655 948951 b0458 CDS ylaC NC_000913.3 478781 479251 R DUF1449 family inner membrane protein complement(478781..479251) Escherichia coli str. K-12 substr. MG1655 948876 b0459 CDS maa NC_000913.3 479367 479918 R maltose O-acetyltransferase complement(479367..479918) Escherichia coli str. K-12 substr. MG1655 945096 b0460 CDS hha NC_000913.3 480090 480308 R haemolysin expression modulating protein; modulator of gene expression, with H-NS complement(480090..480308) Escherichia coli str. K-12 substr. MG1655 945098 b0461 CDS tomB NC_000913.3 480334 480708 R Hha toxicity attenuator; conjugation-related protein complement(480334..480708) Escherichia coli str. K-12 substr. MG1655 945106 b0462 CDS acrB NC_000913.3 481254 484403 R acridine efflux pump; multidrug efflux system protein complement(481254..484403) Escherichia coli str. K-12 substr. MG1655 945108 b0463 CDS acrA NC_000913.3 484426 485619 R acridine efflux pump; multidrug efflux system complement(484426..485619) Escherichia coli str. K-12 substr. MG1655 945112 b0464 CDS acrR NC_000913.3 485761 486408 D acrAB operon repressor; transcriptional repressor 485761..486408 Escherichia coli str. K-12 substr. MG1655 945516 b0465 CDS mscK NC_000913.3 486536 489898 D mechanosensitive channel protein; mechanosensitive channel protein, intermediate conductance, K+ regulated 486536..489898 Escherichia coli str. K-12 substr. MG1655 945132 b0466 CDS ybaM NC_000913.3 490110 490271 R DUF2496 family protein complement(490110..490271) Escherichia coli str. K-12 substr. MG1655 945144 b0467 CDS priC NC_000913.3 490285 490812 R primosomal replication protein N'' complement(490285..490812) Escherichia coli str. K-12 substr. MG1655 945071 b0468 CDS ybaN NC_000913.3 490882 491259 D putative gene 58; DUF454 family inner membrane protein 490882..491259 Escherichia coli str. K-12 substr. MG1655 945558 b0469 CDS apt NC_000913.3 491412 491963 D adenine phosphoribosyltransferase 491412..491963 Escherichia coli str. K-12 substr. MG1655 945113 b0470 CDS dnaX NC_000913.3 492092 494023 D DNA polymerase III, tau and gamma subunits; DNA elongation factor III; DNA polymerase III/DNA elongation factor III, tau and gamma subunits 492092..494023 Escherichia coli str. K-12 substr. MG1655 945105 b0471 CDS ybaB NC_000913.3 494076 494405 D DNA-binding protein, putative nucleoid-associated protein 494076..494405 Escherichia coli str. K-12 substr. MG1655 945104 b0472 CDS recR NC_000913.3 494405 495010 D recombination and repair; gap repair protein 494405..495010 Escherichia coli str. K-12 substr. MG1655 945100 b0473 CDS htpG NC_000913.3 495120 496994 D chaperone Hsp90, heat shock protein C 62.5; protein refolding molecular co-chaperone Hsp90, Hsp70-dependent; heat-shock protein; ATPase 495120..496994 Escherichia coli str. K-12 substr. MG1655 945099 b0474 CDS adk NC_000913.3 497175 497819 D adenylate kinase activity; pleiotropic effects on glycerol-3-phosphate acyltransferase activity; adenylate kinase 497175..497819 Escherichia coli str. K-12 substr. MG1655 945097 b0475 CDS hemH NC_000913.3 498055 499017 D ferrochelatase: final enzyme of heme biosynthesis; ferrochelatase 498055..499017 Escherichia coli str. K-12 substr. MG1655 947532 b0476 CDS aes NC_000913.3 499014 499973 R acetyl esterase complement(499014..499973) Escherichia coli str. K-12 substr. MG1655 947514 b0477 CDS gsk NC_000913.3 500125 501429 D inosine-guanosine kinase; inosine/guanosine kinase 500125..501429 Escherichia coli str. K-12 substr. MG1655 946584 b0478 CDS ybaL NC_000913.3 501562 503238 R putative transport protein; inner membrane putative NAD(P)-binding transporter complement(501562..503238) Escherichia coli str. K-12 substr. MG1655 946576 b0479 CDS fsr NC_000913.3 503476 504696 R fosmidomycin resistance protein; putative fosmidomycin efflux system protein complement(503476..504696) Escherichia coli str. K-12 substr. MG1655 945119 b0480 CDS ushA NC_000913.3 504914 506566 D UDP-sugar hydrolase (5'-nucleotidase); bifunctional UDP-sugar hydrolase/5'-nucleotidase 504914..506566 Escherichia coli str. K-12 substr. MG1655 947331 b0481 CDS ybaK NC_000913.3 506603 507082 R Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase complement(506603..507082) Escherichia coli str. K-12 substr. MG1655 947083 b0482 CDS ybaP NC_000913.3 507286 508080 R putative ligase; TraB family protein complement(507286..508080) Escherichia coli str. K-12 substr. MG1655 945124 b0483 CDS ybaQ NC_000913.3 508218 508559 D putative DNA-binding transcriptional regulator 508218..508559 Escherichia coli str. K-12 substr. MG1655 948800 b0484 CDS copA NC_000913.3 508875 511379 R copper transporter complement(508875..511379) Escherichia coli str. K-12 substr. MG1655 946106 b0485 CDS glsA NC_000913.3 511641 512573 D putative glutaminase; glutaminase 1 511641..512573 Escherichia coli str. K-12 substr. MG1655 946187 b0486 CDS ybaT NC_000913.3 512576 513868 D putative amino acid/amine transport protein; putative amino acid transporter 512576..513868 Escherichia coli str. K-12 substr. MG1655 945363 b0487 CDS cueR NC_000913.3 513993 514400 D copper-responsive regulon transcriptional regulator 513993..514400 Escherichia coli str. K-12 substr. MG1655 945332 b0488 CDS ybbJ NC_000913.3 514401 514859 R inner membrane protein; stimulator of the QmcA suppressor of ftsH-htpX complement(514401..514859) Escherichia coli str. K-12 substr. MG1655 945126 b0489 CDS qmcA NC_000913.3 514856 515773 R putative protease; PHB domain membrane-anchored putative protease complement(514856..515773) Escherichia coli str. K-12 substr. MG1655 947257 b0490 CDS fetA NC_000913.3 515919 516596 D putative ATP-binding component of a transport system; iron export ABC transporter ATPase; peroxide resistance protein 515919..516596 Escherichia coli str. K-12 substr. MG1655 946990 b0491 CDS fetB NC_000913.3 516583 517362 D putative metal resistance protein; iron export ABC transporter permease; peroxide resistance protein 516583..517362 Escherichia coli str. K-12 substr. MG1655 945137 b0492 CDS ybbN NC_000913.3 517425 518279 R putative thioredoxin-like protein; DnaK co-chaperone, thioredoxin-like protein complement(517425..518279) Escherichia coli str. K-12 substr. MG1655 947119 b0493 CDS ybbO NC_000913.3 518340 519149 R putative oxidoreductase complement(518340..519149) Escherichia coli str. K-12 substr. MG1655 945337 b0494 CDS tesA NC_000913.3 519139 519765 R acyl-CoA thioesterase I; also functions as protease I; acyl-CoA thioesterase 1 and protease I and lysophospholipase L1 complement(519139..519765) Escherichia coli str. K-12 substr. MG1655 945127 b0495 CDS ybbA NC_000913.3 519733 520419 D putative ATP-binding component of a transport system; putative ABC transporter ATPase 519733..520419 Escherichia coli str. K-12 substr. MG1655 945122 b0496 CDS ybbP NC_000913.3 520416 522830 D putative oxidoreductase; putative ABC transporter permease 520416..522830 Escherichia coli str. K-12 substr. MG1655 945118 b0497 CDS rhsD NC_000913.3 523261 527541 D rhsD protein in rhs element; Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor 523261..527541 Escherichia coli str. K-12 substr. MG1655 945116 b0498 CDS ybbC NC_000913.3 527581 527949 D putative immunity protein 527581..527949 Escherichia coli str. K-12 substr. MG1655 945115 b0499 CDS rhsH NC_000913.3 527952 528659 D pseudogene, Rhs family C-terminal fragment with unique putative toxin domain; <NA> 527952..528659 Escherichia coli str. K-12 substr. MG1655 945114 b0501 CDS ybbD NC_000913.3 528640 529130 D pseudogene; <NA> 528640..529130 Escherichia coli str. K-12 substr. MG1655 945133 b4632 CDS ylbI NC_000913.3 529500 529592 D pseudogene, Rhs family protein; <NA> 529500..529592 Escherichia coli str. K-12 substr. MG1655 5625558 b0502 CDS ylbG NC_000913.3 529595 530016 R pseudogene, DNA-binding transcriptional regulator homology; <NA> complement(join(529595..529660,529660..530016)) Escherichia coli str. K-12 substr. MG1655 946803 b0503 CDS mnmH NC_000913.3 530132 531226 R putative capsule anchoring protein; tRNA 2-selenouridine synthase, selenophosphate-dependent complement(530132..531226) Escherichia coli str. K-12 substr. MG1655 947063 b0504 CDS allS NC_000913.3 531295 532221 R putative transcriptional regulator LYSR-type; allD operon transcriptional activator complement(531295..532221) Escherichia coli str. K-12 substr. MG1655 945139 b0505 CDS allA NC_000913.3 532451 532933 D ureidoglycolate lyase, releasing urea 532451..532933 Escherichia coli str. K-12 substr. MG1655 945141 b0506 CDS allR NC_000913.3 533011 533826 D glyoxylate-inducible transcriptional repressor of all and gcl operons 533011..533826 Escherichia coli str. K-12 substr. MG1655 945333 b0507 CDS gcl NC_000913.3 533916 535697 D glyoxylate carboligase 533916..535697 Escherichia coli str. K-12 substr. MG1655 945394 b0508 CDS hyi NC_000913.3 535710 536486 D hydroxypyruvate isomerase 535710..536486 Escherichia coli str. K-12 substr. MG1655 946186 b0509 CDS glxR NC_000913.3 536586 537464 D tartronate semialdehyde reductase, NADH-dependent 536586..537464 Escherichia coli str. K-12 substr. MG1655 945146 b0511 CDS ybbW NC_000913.3 537633 539087 D putative allantoin transporter 537633..539087 Escherichia coli str. K-12 substr. MG1655 945138 b0512 CDS allB NC_000913.3 539147 540508 D allantoinase 539147..540508 Escherichia coli str. K-12 substr. MG1655 945134 b0513 CDS ybbY NC_000913.3 540565 541866 D putative uracil/xanthine transporter 540565..541866 Escherichia coli str. K-12 substr. MG1655 945131 b0514 CDS glxK NC_000913.3 541888 543033 D glycerate kinase II 541888..543033 Escherichia coli str. K-12 substr. MG1655 945129 b0515 CDS allE NC_000913.3 543261 544046 R S-ureidoglycine aminohydrolase complement(543261..544046) Escherichia coli str. K-12 substr. MG1655 945149 b0516 CDS allC NC_000913.3 544057 545292 R allantoate amidohydrolase complement(544057..545292) Escherichia coli str. K-12 substr. MG1655 945150 b0517 CDS allD NC_000913.3 545314 546363 R ureidoglycolate dehydrogenase complement(545314..546363) Escherichia coli str. K-12 substr. MG1655 948342 b0518 CDS fdrA NC_000913.3 546680 548347 D involved in protein transport; multicopy suppressor of dominant negative ftsH mutants; putative NAD(P)-binding acyl-CoA synthetase 546680..548347 Escherichia coli str. K-12 substr. MG1655 946298 b4572 CDS ylbE NC_000913.3 548357 549616 D NO-induced DUF1116 protein 548357..549616 Escherichia coli str. K-12 substr. MG1655 4056025 b0520 CDS ylbF NC_000913.3 549627 550442 D putative carboxylase; putative anaerobic allantoin catabolic oxamate carbamoyltransferase; DUF2877 family protein 549627..550442 Escherichia coli str. K-12 substr. MG1655 945195 b0521 CDS ybcF NC_000913.3 550439 551332 D putative carbamate kinase; putative carbonate kinase 550439..551332 Escherichia coli str. K-12 substr. MG1655 944972 b0522 CDS purK NC_000913.3 551527 552594 R phosphoribosylaminoimidazole carboxylase = AIR carboxylase, CO(2)-fixing subunit; N5-carboxyaminoimidazole ribonucleotide synthase complement(551527..552594) Escherichia coli str. K-12 substr. MG1655 945153 b0523 CDS purE NC_000913.3 552591 553100 R phosphoribosylaminoimidazole carboxylase = AIR carboxylase, catalytic subunit; N5-carboxyaminoimidazole ribonucleotide mutase complement(552591..553100) Escherichia coli str. K-12 substr. MG1655 949031 b0524 CDS lpxH NC_000913.3 553218 553940 R UDP-2,3-diacylglucosamine pyrophosphohydrolase complement(553218..553940) Escherichia coli str. K-12 substr. MG1655 949053 b0525 CDS ppiB NC_000913.3 553943 554437 R peptidyl-prolyl cis-trans isomerase B (rotamase B) complement(553943..554437) Escherichia coli str. K-12 substr. MG1655 949038 b0526 CDS cysS NC_000913.3 554611 555996 D cysteine tRNA synthetase; cysteinyl-tRNA synthetase 554611..555996 Escherichia coli str. K-12 substr. MG1655 946969 b0527 CDS ybcI NC_000913.3 556032 556553 R DUF457 family inner membrane protein complement(556032..556553) Escherichia coli str. K-12 substr. MG1655 945155 b0528 CDS ybcJ NC_000913.3 556661 556873 R ribosome-associated protein; putative RNA-binding protein complement(556661..556873) Escherichia coli str. K-12 substr. MG1655 945158 b0529 CDS folD NC_000913.3 556875 557741 R 5,10-methylene-tetrahydrofolate dehydrogenase; 5,10-methylene-tetrahydrofolate cyclohydrolase; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase complement(556875..557741) Escherichia coli str. K-12 substr. MG1655 945221 b0530 CDS sfmA NC_000913.3 558212 558754 D putative fimbrial-like protein; FimA homolog, function unknown 558212..558754 Escherichia coli str. K-12 substr. MG1655 945522 b0531 CDS sfmC NC_000913.3 558974 559666 D putative chaperone; putative periplasmic pilus chaperone 558974..559666 Escherichia coli str. K-12 substr. MG1655 945367 b0532 CDS sfmD NC_000913.3 559697 562300 D putative outer membrane protein, export function; putative outer membrane export usher protein 559697..562300 Escherichia coli str. K-12 substr. MG1655 945160 b0533 CDS sfmH NC_000913.3 562336 563319 D involved in fimbrial asembly; FimA homolog, function unknown 562336..563319 Escherichia coli str. K-12 substr. MG1655 945407 b0534 CDS sfmF NC_000913.3 563330 563845 D putative fimbrial-like protein; FimA homolog, function unknown 563330..563845 Escherichia coli str. K-12 substr. MG1655 944977 b0535 CDS sfmZ NC_000913.3 563848 564480 R fimbrial Z protein; probable signal transducer; response regulator family protein complement(563848..564480) Escherichia coli str. K-12 substr. MG1655 947079 b0537 CDS intD NC_000913.3 564815 565978 R prophage DLP12 integrase; DLP12 prophage; putative phage integrase complement(564815..565978) Escherichia coli str. K-12 substr. MG1655 947162 b4633 CDS xisD NC_000913.3 565858 566079 R pseudogene, exisionase in defective prophage DLP12;Phage or Prophage Related; <NA> complement(565858..566079) Escherichia coli str. K-12 substr. MG1655 5625559 b0539 CDS exoD NC_000913.3 566098 566376 R pseudogene, DLP12 prophage; phage-type exonuclease family;Phage or Prophage Related; <NA> complement(566098..566376) Escherichia coli str. K-12 substr. MG1655 947902 b4508 CDS peaD NC_000913.3 566376 566687 D pseudogene; DLP12 prophage; replication protein family;Phage or Prophage Related; <NA> 566376..566687 Escherichia coli str. K-12 substr. MG1655 945299 b0542 CDS renD NC_000913.3 566684 568247 D pseudogene, DLP12 prophage;Phage or Prophage Related; <NA> join(566684..566776,568035..568247) Escherichia coli str. K-12 substr. MG1655 945024 b0540 CDS insE1 NC_000913.3 566842 567141 D IS3 transposase A 566842..567141 Escherichia coli str. K-12 substr. MG1655 945759 b0541 CDS insF1 NC_000913.3 567138 568004 D IS3 transposase B 567138..568004 Escherichia coli str. K-12 substr. MG1655 947988 b0543 CDS emrE NC_000913.3 568315 568647 D methylviologen resistance; DLP12 prophage; multidrug resistance protein 568315..568647 Escherichia coli str. K-12 substr. MG1655 948442 b0544 CDS ybcK NC_000913.3 568902 570428 D DLP12 prophage; putative recombinase 568902..570428 Escherichia coli str. K-12 substr. MG1655 945166 b0545 CDS ybcL NC_000913.3 570893 571444 D inactive polymorphonuclear leukocyte migration suppressor; DLP12 prophage; UPF0098 family secreted protein 570893..571444 Escherichia coli str. K-12 substr. MG1655 945165 b0546 CDS ybcM NC_000913.3 571454 572251 D putative ARAC-type regulatory protein; DLP12 prophage; putative DNA-binding transcriptional regulator 571454..572251 Escherichia coli str. K-12 substr. MG1655 945163 b4588 CDS ylcH NC_000913.3 572368 572469 D uncharacterized protein, DLP12 prophage 572368..572469 Escherichia coli str. K-12 substr. MG1655 5061504 b0547 CDS ybcN NC_000913.3 572466 572921 D DLP12 prophage; uncharacterized protein 572466..572921 Escherichia coli str. K-12 substr. MG1655 945162 b0548 CDS ninE NC_000913.3 572921 573091 D similar to phage 82 and lambda proteins; DLP12 prophage; conserved protein 572921..573091 Escherichia coli str. K-12 substr. MG1655 945151 b0549 CDS ybcO NC_000913.3 573084 573374 D DLP12 prophage; uncharacterized protein 573084..573374 Escherichia coli str. K-12 substr. MG1655 945147 b0550 CDS rusA NC_000913.3 573371 573733 D endodeoxyribonuclease RUS (Holliday junction resolvase); DLP12 prophage; endonuclease RUS 573371..573733 Escherichia coli str. K-12 substr. MG1655 945174 b4509 CDS ylcG NC_000913.3 573730 573870 D uncharacterized protein, DLP12 prophage 573730..573870 Escherichia coli str. K-12 substr. MG1655 1450240 b0551 CDS quuD NC_000913.3 573956 574339 D DLP12 prophage; putative antitermination protein 573956..574339 Escherichia coli str. K-12 substr. MG1655 945177 b0553 CDS nmpC NC_000913.3 574529 576825 R DLP12 prophage; truncated outer membrane porin (pseudogene);IS, phage, Tn; Phage or Prophage Related; outer membrane porin protein; locus of qsr prophage; <NA> complement(join(574529..574586,575786..576825)) Escherichia coli str. K-12 substr. MG1655 946786 b0552 CDS insH1 NC_000913.3 574737 575753 R IS5 transposase and trans-activator complement(574737..575753) Escherichia coli str. K-12 substr. MG1655 946163 b0554 CDS essD NC_000913.3 577398 577613 D DLP12 prophage; putative phage lysis protein 577398..577613 Escherichia coli str. K-12 substr. MG1655 947545 b0555 CDS rrrD NC_000913.3 577613 578110 D bacteriophage lambda lysozyme homolog; DLP12 prophage; putative lysozyme 577613..578110 Escherichia coli str. K-12 substr. MG1655 947539 b0556 CDS rzpD NC_000913.3 578107 578568 D bacteriophage lambda endopeptidase homolog; completely contained in another CDS; DLP12 prophage; putative murein endopeptidase 578107..578568 Escherichia coli str. K-12 substr. MG1655 945929 b4510 CDS rzoD NC_000913.3 578327 578509 D completely contained in another CDS; DLP12 prophage; putative lipoprotein 578327..578509 Escherichia coli str. K-12 substr. MG1655 1450242 b0557 CDS borD NC_000913.3 578600 578893 R bacteriophage lambda Bor protein homolog; DLP12 prophage; putative lipoprotein complement(578600..578893) Escherichia coli str. K-12 substr. MG1655 948980 b0558 CDS ybcV NC_000913.3 579184 579594 R putative an envelop protein; DLP12 prophage; uncharacterized protein complement(579184..579594) Escherichia coli str. K-12 substr. MG1655 945178 b0559 CDS ybcW NC_000913.3 579880 580086 D DLP12 prophage; uncharacterized protein 579880..580086 Escherichia coli str. K-12 substr. MG1655 945175 b4589 CDS ylcI NC_000913.3 580251 580445 R DUF3950 family protein, DLP12 prophage complement(580251..580445) Escherichia coli str. K-12 substr. MG1655 5061499 b0560 CDS nohD NC_000913.3 580834 581379 D bacteriophage DNA packaging protein; DLP12 prophage; DNA packaging protein 580834..581379 Escherichia coli str. K-12 substr. MG1655 945172 b4634 CDS aaaD NC_000913.3 581354 581662 D pseudogene; DLP12 prophage; tail fiber assembly protein family;Phage or Prophage Related; <NA> 581354..581662 Escherichia coli str. K-12 substr. MG1655 5625560 b0561 CDS tfaD NC_000913.3 581660 582097 D pseudogene, DLP12 prophage; tail fiber assembly protein family;Phage or Prophage Related; <NA> 581660..582097 Escherichia coli str. K-12 substr. MG1655 945171 b0562 CDS ybcY NC_000913.3 582152 582806 R pseudogene, DLP12 prophage; methyltransferase homology;Phage or Prophage Related; <NA> complement(join(582152..582804,582803..582806)) Escherichia coli str. K-12 substr. MG1655 945170 b0563 CDS tfaX NC_000913.3 582953 583135 D pseudogene, DLP12 prophage;Phage or Prophage Related; <NA> 582953..583135 Escherichia coli str. K-12 substr. MG1655 945183 b0564 CDS appY NC_000913.3 583681 584430 D regulatory protein affecting appA and other genes; global transcriptional activator; DLP12 prophage 583681..584430 Escherichia coli str. K-12 substr. MG1655 948797 b0565 CDS ompT NC_000913.3 584680 585633 R outer membrane protein 3b (a), protease VII; DLP12 prophage; outer membrane protease VII; outer membrane protein 3b complement(584680..585633) Escherichia coli str. K-12 substr. MG1655 945185 b0566 CDS envY NC_000913.3 586147 586908 R envelope protein; thermoregulation of porin biosynthesis; porin thermoregulatory transcriptional activator complement(586147..586908) Escherichia coli str. K-12 substr. MG1655 949114 b0567 CDS ybcH NC_000913.3 587091 587981 R PRK09936 family protein complement(587091..587981) Escherichia coli str. K-12 substr. MG1655 945186 b0568 CDS nfrA NC_000913.3 587982 590954 R bacteriophage N4 receptor, outer membrane protein; bacteriophage N4 receptor, outer membrane subunit complement(587982..590954) Escherichia coli str. K-12 substr. MG1655 944741 b0569 CDS nfrB NC_000913.3 590941 593178 R bacteriophage N4 receptor, subunit, inner membrane protein; bacteriophage N4 receptor, inner membrane subunit complement(590941..593178) Escherichia coli str. K-12 substr. MG1655 945849 b0570 CDS cusS NC_000913.3 593328 594770 R copper-sensing histidine kinase in two-component regulatory system with CusR complement(593328..594770) Escherichia coli str. K-12 substr. MG1655 945978 b0571 CDS cusR NC_000913.3 594760 595443 R response regulator in two-component regulatory system with CusS complement(594760..595443) Escherichia coli str. K-12 substr. MG1655 945003 b0572 CDS cusC NC_000913.3 595600 596973 D copper/silver efflux system, outer membrane component 595600..596973 Escherichia coli str. K-12 substr. MG1655 946288 b0573 CDS cusF NC_000913.3 597131 597463 D periplasmic copper- and silver-binding protein 597131..597463 Escherichia coli str. K-12 substr. MG1655 945188 b0574 CDS cusB NC_000913.3 597479 598702 D copper/silver efflux system, membrane fusion protein 597479..598702 Escherichia coli str. K-12 substr. MG1655 945189 b0575 CDS cusA NC_000913.3 598714 601857 D copper/silver efflux system, membrane component 598714..601857 Escherichia coli str. K-12 substr. MG1655 945191 b0576 CDS pheP NC_000913.3 601959 603335 D phenylalanine-specific transport system; phenylalanine transporter 601959..603335 Escherichia coli str. K-12 substr. MG1655 945199 b0577 CDS ybdG NC_000913.3 603416 604663 R putative transport; mechanosensitive channel protein, miniconductance complement(603416..604663) Escherichia coli str. K-12 substr. MG1655 946243 b0578 CDS nfsB NC_000913.3 604771 605424 R oxygen-insensitive NAD(P)H nitroreductase; dihydropteridine reductase, NAD(P)H-dependent, oxygen-insensitive complement(604771..605424) Escherichia coli str. K-12 substr. MG1655 945778 b0579 CDS ybdF NC_000913.3 605518 605886 R DUF419 family protein complement(605518..605886) Escherichia coli str. K-12 substr. MG1655 948302 b0580 CDS ybdJ NC_000913.3 605951 606199 R DUF1158 family putative inner membrane protein complement(605951..606199) Escherichia coli str. K-12 substr. MG1655 947183 b0581 CDS ybdK NC_000913.3 606265 607383 R weak gamma-glutamyl:cysteine ligase complement(606265..607383) Escherichia coli str. K-12 substr. MG1655 947246 b4415 CDS hokE NC_000913.3 607836 607988 D small toxic membrane polypeptide; the corresponding mokE lacks a start codon, and the regulatory RNA sokE has not been identified; toxic polypeptide, small 607836..607988 Escherichia coli str. K-12 substr. MG1655 2847715 b0582 CDS insL1 NC_000913.3 608065 609177 D IS186 transposase 608065..609177 Escherichia coli str. K-12 substr. MG1655 945200 b0583 CDS entD NC_000913.3 609459 610079 R enterochelin synthetase, component D; phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex complement(609459..610079) Escherichia coli str. K-12 substr. MG1655 945194 b0584 CDS fepA NC_000913.3 610254 612494 R outer membrane receptor for ferric enterobactin (enterochelin) and colicins B and D; ferrienterobactin outer membrane transporter complement(610254..612494) Escherichia coli str. K-12 substr. MG1655 945193 b0585 CDS fes NC_000913.3 612737 613939 D enterochelin esterase; enterobactin/ferrienterobactin esterase 612737..613939 Escherichia coli str. K-12 substr. MG1655 945181 b4511 CDS ybdZ NC_000913.3 613942 614160 D stimulator of EntF adenylation activity, MbtH-like 613942..614160 Escherichia coli str. K-12 substr. MG1655 1450243 b0586 CDS entF NC_000913.3 614157 618038 D ATP-dependent serine activating enzyme (may be part of enterobactin synthase as component F); enterobactin synthase multienzyme complex component, ATP-dependent 614157..618038 Escherichia coli str. K-12 substr. MG1655 945184 b0587 CDS fepE NC_000913.3 618254 619387 D ferric enterobactin (enterochelin) transport; regulator of length of O-antigen component of lipopolysaccharide chains 618254..619387 Escherichia coli str. K-12 substr. MG1655 945180 b0588 CDS fepC NC_000913.3 619384 620199 R ATP-binding component of ferric enterobactin transport; ferrienterobactin ABC transporter ATPase complement(619384..620199) Escherichia coli str. K-12 substr. MG1655 945201 b0589 CDS fepG NC_000913.3 620196 621188 R ferric enterobactin transport protein; membrane component of ABC superfamily; iron-enterobactin ABC transporter permease complement(620196..621188) Escherichia coli str. K-12 substr. MG1655 945209 b0590 CDS fepD NC_000913.3 621185 622189 R ferric enterobactin (enterochelin) transport; membrane component of ABC superfamily; ferrienterobactin ABC transporter permease complement(621185..622189) Escherichia coli str. K-12 substr. MG1655 945214 b0591 CDS entS NC_000913.3 622300 623550 D putative transport; enterobactin exporter, iron-regulated 622300..623550 Escherichia coli str. K-12 substr. MG1655 946268 b0592 CDS fepB NC_000913.3 623554 624510 R ferric enterobactin (enterochelin) binding protein; periplasmic component; periplasmic-binding component of ABC superfamily; ferrienterobactin ABC transporter periplasmic binding protein complement(623554..624510) Escherichia coli str. K-12 substr. MG1655 947538 b0593 CDS entC NC_000913.3 624885 626060 D isochorismate hydroxymutase 2, enterochelin biosynthesis; isochorismate synthase 1 624885..626060 Escherichia coli str. K-12 substr. MG1655 945511 b0594 CDS entE NC_000913.3 626070 627680 D 2,3-dihydroxybenzoate-AMP ligase; 2,3-dihydroxybenzoate-AMP ligase component of enterobactin synthase multienzyme complex 626070..627680 Escherichia coli str. K-12 substr. MG1655 947426 b0595 CDS entB NC_000913.3 627694 628551 D 2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochroismatase; isochorismatase 627694..628551 Escherichia coli str. K-12 substr. MG1655 946178 b0596 CDS entA NC_000913.3 628551 629297 D 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase, enterochelin biosynthesis; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase 628551..629297 Escherichia coli str. K-12 substr. MG1655 945284 b0597 CDS entH NC_000913.3 629300 629713 D enterobactin synthesis proofreading thioesterase 629300..629713 Escherichia coli str. K-12 substr. MG1655 945215 b0598 CDS cstA NC_000913.3 629894 631999 D carbon starvation protein involved in peptide utilization; APC peptide transporter family protein 629894..631999 Escherichia coli str. K-12 substr. MG1655 945213 b4512 CDS ybdD NC_000913.3 632182 632379 D DUF466 family protein 632182..632379 Escherichia coli str. K-12 substr. MG1655 949021 b0599 CDS ybdH NC_000913.3 632389 633477 R putative oxidoreductase complement(632389..633477) Escherichia coli str. K-12 substr. MG1655 945212 b0600 CDS ybdL NC_000913.3 633586 634746 D PLP-dependent methionine aminotransferase; methionine aminotransferase, PLP-dependent 633586..634746 Escherichia coli str. K-12 substr. MG1655 945211 b0601 CDS ybdM NC_000913.3 634747 635376 R Spo0J family protein, ParB-like nuclease domain complement(634747..635376) Escherichia coli str. K-12 substr. MG1655 945206 b0602 CDS ybdN NC_000913.3 635349 636569 R PAPS reductase-like domain protein complement(635349..636569) Escherichia coli str. K-12 substr. MG1655 945205 b0603 CDS ybdO NC_000913.3 636716 637618 R putative transcriptional regulator LYSR-type; putative DNA-binding transcriptional regulator complement(636716..637618) Escherichia coli str. K-12 substr. MG1655 945216 b0604 CDS dsbG NC_000913.3 637827 638573 R thiol:disulfide interchange protein; thiol:disulfide interchange protein, periplasmic complement(637827..638573) Escherichia coli str. K-12 substr. MG1655 945224 b0605 CDS ahpC NC_000913.3 638945 639508 D alkyl hydroperoxide reductase, C22 subunit; detoxification of hydroperoxides; alkyl hydroperoxide reductase, C22 subunit 638945..639508 Escherichia coli str. K-12 substr. MG1655 945225 b0606 CDS ahpF NC_000913.3 639753 641318 D alkyl hydroperoxide reductase, F52a subunit; detoxification of hydroperoxides; alkyl hydroperoxide reductase, F52a subunit, FAD/NAD(P)-binding 639753..641318 Escherichia coli str. K-12 substr. MG1655 947540 b0607 CDS uspG NC_000913.3 641439 641867 R universal stress protein UP12 complement(641439..641867) Escherichia coli str. K-12 substr. MG1655 945229 b0608 CDS ybdR NC_000913.3 642088 643326 D putative oxidoreductase; putative Zn-dependent NAD(P)-binding oxidoreductase 642088..643326 Escherichia coli str. K-12 substr. MG1655 949067 b0610 CDS rnk NC_000913.3 643557 643967 R regulator of nucleoside diphosphate kinase complement(643557..643967) Escherichia coli str. K-12 substr. MG1655 947546 b0611 CDS rna NC_000913.3 644197 645003 R RNase I, cleaves phosphodiester bond between any two nucleotides; ribonuclease I complement(644197..645003) Escherichia coli str. K-12 substr. MG1655 949065 b0612 CDS citT NC_000913.3 645117 646580 R citrate/succinate antiporter; citrate carrier complement(645117..646580) Escherichia coli str. K-12 substr. MG1655 949070 b0613 CDS citG NC_000913.3 646631 647509 R 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase complement(646631..647509) Escherichia coli str. K-12 substr. MG1655 946395 b0614 CDS citX NC_000913.3 647484 648035 R apo-citrate lyase phosphoribosyl-dephospho-CoA transferase complement(647484..648035) Escherichia coli str. K-12 substr. MG1655 949084 b0615 CDS citF NC_000913.3 648039 649571 R citrate lyase alpha chain; citrate lyase, citrate-ACP transferase (alpha) subunit complement(648039..649571) Escherichia coli str. K-12 substr. MG1655 945230 b0616 CDS citE NC_000913.3 649582 650490 R citrate lyase, citryl-ACP lyase (beta) subunit complement(649582..650490) Escherichia coli str. K-12 substr. MG1655 945406 b0617 CDS citD NC_000913.3 650487 650783 R citrate lyase acyl carrier protein (gamma chain); citrate lyase, acyl carrier (gamma) subunit complement(650487..650783) Escherichia coli str. K-12 substr. MG1655 945415 b0618 CDS citC NC_000913.3 650798 651856 R citrate lyase synthetase (citrate (pro-3S)-lyase ligase; citrate lyase ligase; [citrate [pro-3S]-lyase] ligase complement(650798..651856) Escherichia coli str. K-12 substr. MG1655 945231 b0619 CDS citA NC_000913.3 652235 653893 D putative sensor-type protein; sensory histidine kinase in two-component regulatory system with CitB 652235..653893 Escherichia coli str. K-12 substr. MG1655 945233 b0620 CDS citB NC_000913.3 653862 654542 D sequence similarity to Shigella regulator; response regulator in two-component regulatory system with CitA 653862..654542 Escherichia coli str. K-12 substr. MG1655 947008 b0621 CDS dcuC NC_000913.3 654583 655968 R transport of dicarboxylates; anaerobic C4-dicarboxylate transport complement(654583..655968) Escherichia coli str. K-12 substr. MG1655 945000 b0622 CDS pagP NC_000913.3 656557 657117 D phospholipid:lipid A palmitoyltransferase 656557..657117 Escherichia coli str. K-12 substr. MG1655 946360 b0623 CDS cspE NC_000913.3 657292 657501 D cold shock protein; constitutive cold shock family transcription antitermination protein; negative regulator of cspA transcription; RNA melting protein; ssDNA-binding protein 657292..657501 Escherichia coli str. K-12 substr. MG1655 947024 b0624 CDS flc NC_000913.3 657555 657938 R fluoride efflux channel, dual topology membrane protein complement(657555..657938) Escherichia coli str. K-12 substr. MG1655 945798 b4581 CDS ybeM NC_000913.3 658031 658818 D pseudogene, C-N hydrolase superfamily homology;putative enzyme; Not classified; putative amidase; <NA> join(658031..658225,658225..658818) Escherichia coli str. K-12 substr. MG1655 4056041 b0627 CDS tatE NC_000913.3 658947 659150 D TatABCE protein translocation system subunit 658947..659150 Escherichia coli str. K-12 substr. MG1655 945228 b0628 CDS lipA NC_000913.3 659251 660216 R lipoate synthesis, sulfur insertion?; lipoate synthase complement(659251..660216) Escherichia coli str. K-12 substr. MG1655 945227 b0629 CDS ybeF NC_000913.3 660425 661378 R putative transcriptional regulator LYSR-type; LysR family putative transcriptional regulator complement(660425..661378) Escherichia coli str. K-12 substr. MG1655 945219 b0630 CDS lipB NC_000913.3 661637 662278 R protein of lipoate biosynthesis; octanoyltransferase; octanoyl-[ACP]:protein N-octanoyltransferase complement(661637..662278) Escherichia coli str. K-12 substr. MG1655 945217 b0631 CDS ybeD NC_000913.3 662379 662642 R UPF0250 family protein complement(662379..662642) Escherichia coli str. K-12 substr. MG1655 945220 b0632 CDS dacA NC_000913.3 662752 663963 R D-alanyl-D-alanine carboxypeptidase, fraction A; penicillin-binding protein 5; D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) complement(662752..663963) Escherichia coli str. K-12 substr. MG1655 945222 b0633 CDS rlpA NC_000913.3 664102 665190 R a minor lipoprotein; septal ring protein, suppressor of prc, minor lipoprotein complement(664102..665190) Escherichia coli str. K-12 substr. MG1655 945241 b0634 CDS mrdB NC_000913.3 665201 666313 R rod shape-determining membrane protein; sensitivity to radiation and drugs; cell wall shape-determining protein complement(665201..666313) Escherichia coli str. K-12 substr. MG1655 945238 b0635 CDS mrdA NC_000913.3 666316 668217 R cell elongation, e phase; peptidoglycan synthetase; penicillin-binding protein 2; penicillin-binding protein 2, transpeptidase involved in peptidoglycan synthesis complement(666316..668217) Escherichia coli str. K-12 substr. MG1655 945240 b0636 CDS rlmH NC_000913.3 668248 668715 R 23S rRNA m(3)Psi1915 pseudouridine methyltransferase, SAM-dependent complement(668248..668715) Escherichia coli str. K-12 substr. MG1655 945239 b0637 CDS rsfS NC_000913.3 668719 669036 R ribosomal silencing factor complement(668719..669036) Escherichia coli str. K-12 substr. MG1655 945237 b0638 CDS cobC NC_000913.3 669296 669907 R homolog of Salmonella cobC, a phosphohistidine protein; putative alpha-ribazole-5'-P phosphatase complement(669296..669907) Escherichia coli str. K-12 substr. MG1655 945246 b0639 CDS nadD NC_000913.3 669931 670572 R nicotinic acid mononucleotide adenylyltransferase, NAD(P)-dependent complement(669931..670572) Escherichia coli str. K-12 substr. MG1655 945248 b0640 CDS holA NC_000913.3 670574 671605 R DNA polymerase III, delta subunit complement(670574..671605) Escherichia coli str. K-12 substr. MG1655 947573 b0641 CDS lptE NC_000913.3 671605 672186 R a minor lipoprotein; LPS assembly OM complex LptDE, lipoprotein component complement(671605..672186) Escherichia coli str. K-12 substr. MG1655 946257 b0642 CDS leuS NC_000913.3 672201 674783 R leucine tRNA synthetase; leucyl-tRNA synthetase complement(672201..674783) Escherichia coli str. K-12 substr. MG1655 947497 b0643 CDS ybeL NC_000913.3 675018 675500 D putative alpha helical protein; DUF1451 family protein 675018..675500 Escherichia coli str. K-12 substr. MG1655 945252 b0644 CDS ybeQ NC_000913.3 675570 676547 R Sel1 family TPR-like repeat protein complement(675570..676547) Escherichia coli str. K-12 substr. MG1655 945251 b0645 CDS ybeR NC_000913.3 676711 677418 D uncharacterized protein 676711..677418 Escherichia coli str. K-12 substr. MG1655 945249 b0646 CDS djlB NC_000913.3 677415 678842 D putative enzyme of polynucleotide modification; putative HscC co-chaperone, uncharacterized J domain-containing protein 677415..678842 Escherichia coli str. K-12 substr. MG1655 945245 b0647 CDS ybeT NC_000913.3 678852 679406 R Sel1 family TPR-like repeat protein complement(678852..679406) Escherichia coli str. K-12 substr. MG1655 945243 b0648 CDS ybeU NC_000913.3 679508 680215 D putative tRNA ligase; DUF1266 family protein 679508..680215 Escherichia coli str. K-12 substr. MG1655 945244 b0649 CDS djlC NC_000913.3 680212 681663 D J domain-containing HscC co-chaperone; Hsc56 680212..681663 Escherichia coli str. K-12 substr. MG1655 945253 b0650 CDS hscC NC_000913.3 681723 683393 R Hsp70 family chaperone Hsc62; RpoD-binding transcription inhibitor complement(681723..683393) Escherichia coli str. K-12 substr. MG1655 945218 b0651 CDS rihA NC_000913.3 683477 684412 R ribonucleoside hydrolase 1 complement(683477..684412) Escherichia coli str. K-12 substr. MG1655 945503 b0652 CDS gltL NC_000913.3 684530 685255 R ATP-binding protein of glutamate/aspartate transport system; glutamate/aspartate ABC transporter ATPase complement(684530..685255) Escherichia coli str. K-12 substr. MG1655 945254 b0653 CDS gltK NC_000913.3 685255 685929 R glutamate/aspartate transport system permease; membrane component of ABC superfamily; glutamate/aspartate ABC transporter permease complement(685255..685929) Escherichia coli str. K-12 substr. MG1655 947354 b0654 CDS gltJ NC_000913.3 685929 686669 R glutamate/aspartate transport system permease; membrane component of ABC superfamily; glutamate/aspartate ABC transporter permease complement(685929..686669) Escherichia coli str. K-12 substr. MG1655 945443 b0655 CDS gltI NC_000913.3 686839 687747 R periplasmic-binding component of ABC superfamily; glutamate/aspartate periplasmic binding protein complement(686839..687747) Escherichia coli str. K-12 substr. MG1655 946938 b0656 CDS insH1 NC_000913.3 687997 689013 R IS5 transposase and trans-activator complement(687997..689013) Escherichia coli str. K-12 substr. MG1655 944917 b0657 CDS lnt NC_000913.3 689343 690881 R apolipoprotein N-acyltransferase, copper homeostasis protein, inner membrane; apolipoprotein N-acyltransferase complement(689343..690881) Escherichia coli str. K-12 substr. MG1655 946201 b0658 CDS ybeX NC_000913.3 690906 691784 R putative transport protein; putative ion transport complement(690906..691784) Escherichia coli str. K-12 substr. MG1655 946417 b0659 CDS ybeY NC_000913.3 691874 692341 R ssRNA-specific endoribonuclease; 16S rRNA 3' end maturation and quality control co-endoribonuclease working with RNase R; rRNA transcription antitermination factor complement(691874..692341) Escherichia coli str. K-12 substr. MG1655 946430 b0660 CDS ybeZ NC_000913.3 692338 693378 R putative ATP-binding protein in pho regulon; heat shock protein, putative NTPase; PhoH-like protein complement(692338..693378) Escherichia coli str. K-12 substr. MG1655 948044 b0661 CDS miaB NC_000913.3 693531 694955 R tRNA-i(6)A37 methylthiotransferase complement(693531..694955) Escherichia coli str. K-12 substr. MG1655 945260 b0662 CDS ubiF NC_000913.3 695101 696276 D 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol oxygenase 695101..696276 Escherichia coli str. K-12 substr. MG1655 945261 b0674 CDS asnB NC_000913.3 697513 699177 R asparagine synthetase B complement(697513..699177) Escherichia coli str. K-12 substr. MG1655 945281 b0675 CDS umpH NC_000913.3 699574 700326 R N-acetylglucosamine metabolism; UMP phosphatase complement(699574..700326) Escherichia coli str. K-12 substr. MG1655 945283 b0676 CDS nagC NC_000913.3 700374 701594 R transcriptional repressor of nag (N-acetylglucosamine) operon; N-acetylglucosamine-inducible nag divergent operon transcriptional repressor complement(700374..701594) Escherichia coli str. K-12 substr. MG1655 945285 b0677 CDS nagA NC_000913.3 701603 702751 R N-acetylglucosamine-6-phosphate deacetylase complement(701603..702751) Escherichia coli str. K-12 substr. MG1655 945289 b0678 CDS nagB NC_000913.3 702811 703611 R glucosamine-6-phosphate deaminase complement(702811..703611) Escherichia coli str. K-12 substr. MG1655 945290 b0679 CDS nagE NC_000913.3 703944 705890 D PTS system, N-acetylglucosamine-specific enzyme IIABC; N-acetyl glucosamine specific PTS enzyme IIC, IIB, and IIA components 703944..705890 Escherichia coli str. K-12 substr. MG1655 945292 b0680 CDS glnS NC_000913.3 706093 707757 D glutamine tRNA synthetase; glutamyl-tRNA synthetase 706093..707757 Escherichia coli str. K-12 substr. MG1655 945310 b0681 CDS chiP NC_000913.3 708334 709740 D chitoporin, uptake of chitosugars 708334..709740 Escherichia coli str. K-12 substr. MG1655 945296 b0682 CDS chiQ NC_000913.3 709790 710116 D chitosugar-induced verified lipoprotein 709790..710116 Escherichia coli str. K-12 substr. MG1655 945713 b0683 CDS fur NC_000913.3 710200 710646 R negative regulator; ferric iron uptake regulon transcriptional repressor; autorepressor complement(710200..710646) Escherichia coli str. K-12 substr. MG1655 945295 b4637 CDS uof NC_000913.3 710639 710725 R ryhB-regulated fur leader peptide complement(710639..710725) Escherichia coli str. K-12 substr. MG1655 5625562 b0684 CDS fldA NC_000913.3 710935 711465 R flavodoxin 1 complement(710935..711465) Escherichia coli str. K-12 substr. MG1655 945293 b0685 CDS ybfE NC_000913.3 711605 711898 R LexA-regulated protein, CopB family complement(711605..711898) Escherichia coli str. K-12 substr. MG1655 945291 b0686 CDS ybfF NC_000913.3 712038 712802 R acyl-CoA esterase complement(712038..712802) Escherichia coli str. K-12 substr. MG1655 945288 b0687 CDS seqA NC_000913.3 712987 713532 D negative modulator of initiation of replication 712987..713532 Escherichia coli str. K-12 substr. MG1655 945272 b0688 CDS pgm NC_000913.3 713558 715198 D phosphoglucomutase 713558..715198 Escherichia coli str. K-12 substr. MG1655 945271 b0689 CDS ybfP NC_000913.3 715412 715906 D putative pectinase; lipoprotein 715412..715906 Escherichia coli str. K-12 substr. MG1655 945274 b0691 CDS ybfG NC_000913.3 715947 716597 R pseudogene; <NA> complement(715947..716597) Escherichia coli str. K-12 substr. MG1655 945287 b4636 CDS ybfI NC_000913.3 716721 716870 R pseudogene; <NA> complement(716721..716870) Escherichia coli str. K-12 substr. MG1655 5625563 b0692 CDS potE NC_000913.3 716946 718265 R putrescine transport protein; putrescine/proton symporter: putrescine/ornithine antiporter complement(716946..718265) Escherichia coli str. K-12 substr. MG1655 945422 b0693 CDS speF NC_000913.3 718262 720460 R ornithine decarboxylase isozyme, inducible complement(718262..720460) Escherichia coli str. K-12 substr. MG1655 945297 b4590 CDS ybfK NC_000913.3 720583 720840 D uncharacterized protein 720583..720840 Escherichia coli str. K-12 substr. MG1655 948953 b0694 CDS kdpE NC_000913.3 721056 721733 R regulator of kdp operon (transcriptional effector); response regulator in two-component regulatory system with KdpD complement(721056..721733) Escherichia coli str. K-12 substr. MG1655 945302 b0695 CDS kdpD NC_000913.3 721730 724414 R sensor for high-affinity potassium transport system; sensory histidine kinase; fused sensory histidine kinase in two-component regulatory system with KdpE: signal sensing protein complement(721730..724414) Escherichia coli str. K-12 substr. MG1655 946744 b0696 CDS kdpC NC_000913.3 724407 724979 R high-affinity potassium transport system; potassium translocating ATPase, subunit C complement(724407..724979) Escherichia coli str. K-12 substr. MG1655 947508 b0697 CDS kdpB NC_000913.3 724988 727036 R ATPase of high-affinity potassium transport system, B chain; potassium translocating ATPase, subunit B complement(724988..727036) Escherichia coli str. K-12 substr. MG1655 947450 b0698 CDS kdpA NC_000913.3 727059 728732 R ATPase of high-affinity potassium transport system, A chain; potassium translocating ATPase, subunit A complement(727059..728732) Escherichia coli str. K-12 substr. MG1655 946045 b4513 CDS kdpF NC_000913.3 728732 728821 R potassium ion accessory transporter subunit complement(728732..728821) Escherichia coli str. K-12 substr. MG1655 948946 b0699 CDS ybfA NC_000913.3 729134 729340 D DUF2517 family protein 729134..729340 Escherichia coli str. K-12 substr. MG1655 947452 b0700 CDS rhsC NC_000913.3 729583 733776 D Rhs protein with putative toxin domain; putative neighboring cell growth inhibitor 729583..733776 Escherichia coli str. K-12 substr. MG1655 945306 b0702 CDS ybfB NC_000913.3 733776 734102 D putative membrane protein 733776..734102 Escherichia coli str. K-12 substr. MG1655 947566 b0703 CDS rhsO NC_000913.3 734133 735653 D pseudogene, Rhs family; <NA> 734133..735653 Escherichia coli str. K-12 substr. MG1655 946124 b0704 CDS ybfC NC_000913.3 735650 736219 D putative secreted protein 735650..736219 Escherichia coli str. K-12 substr. MG1655 947288 b4514 CDS ybfQ NC_000913.3 736445 736684 D pseudogene, H repeat-associated protein; <NA> 736445..736684 Escherichia coli str. K-12 substr. MG1655 1450245 b0705 CDS ybfL NC_000913.3 736825 737961 D pseudogene, DDE domain transposase family;putative factor; Not classified; putative receptor protein; <NA> 736825..737961 Escherichia coli str. K-12 substr. MG1655 947075 b0706 CDS ybfD NC_000913.3 738092 738853 D putative DNA ligase; H repeat-associated putative transposase 738092..738853 Escherichia coli str. K-12 substr. MG1655 945176 b0707 CDS ybgA NC_000913.3 739001 739510 D DUF1722 family protein 739001..739510 Escherichia coli str. K-12 substr. MG1655 944853 b0708 CDS phr NC_000913.3 739507 740925 D deoxyribodipyrimidine photolyase (photoreactivation); deoxyribodipyrimidine photolyase, FAD-binding 739507..740925 Escherichia coli str. K-12 substr. MG1655 947005 b0709 CDS dtpD NC_000913.3 741075 742556 R putative transport protein; dipeptide and tripeptide permease D complement(741075..742556) Escherichia coli str. K-12 substr. MG1655 947368 b0710 CDS ybgI NC_000913.3 742827 743570 D NIF3 family metal-binding protein 742827..743570 Escherichia coli str. K-12 substr. MG1655 945824 b0711 CDS ybgJ NC_000913.3 743593 744249 D putative carboxylase; putative allophanate hydrolase, subunit 1 743593..744249 Escherichia coli str. K-12 substr. MG1655 945311 b0712 CDS ybgK NC_000913.3 744243 745175 D putative carboxylase; putative allophanate hydrolase, subunit 2 744243..745175 Escherichia coli str. K-12 substr. MG1655 945317 b0713 CDS ybgL NC_000913.3 745165 745899 D putative lactam utilization protein; UPF0271 family protein 745165..745899 Escherichia coli str. K-12 substr. MG1655 945318 b0714 CDS nei NC_000913.3 745935 746726 D endonuclease VIII and DNA N-glycosylase with an AP lyase activity; endonuclease VIII and 5-formyluracil/5-hydroxymethyluracil DNA glycosylase 745935..746726 Escherichia coli str. K-12 substr. MG1655 945320 b0715 CDS abrB NC_000913.3 746723 747769 R putative transport protein; regulator of aidB expression; inner membrane protein complement(746723..747769) Escherichia coli str. K-12 substr. MG1655 945321 b0716 CDS ybgO NC_000913.3 747921 748982 R putative fimbrial protein complement(747921..748982) Escherichia coli str. K-12 substr. MG1655 947550 b0717 CDS ybgP NC_000913.3 748979 749707 R putative chaperone; putative periplasmic pilin chaperone complement(748979..749707) Escherichia coli str. K-12 substr. MG1655 945110 b0718 CDS ybgQ NC_000913.3 749722 752169 R putative outer membrane protein complement(749722..752169) Escherichia coli str. K-12 substr. MG1655 946537 b0719 CDS ybgD NC_000913.3 752229 752795 R putative fimbrial-like protein; putative fimbrial-like adhesin protein complement(752229..752795) Escherichia coli str. K-12 substr. MG1655 945325 b0720 CDS gltA NC_000913.3 753185 754468 R citrate synthase complement(753185..754468) Escherichia coli str. K-12 substr. MG1655 945323 b0721 CDS sdhC NC_000913.3 755177 755566 D succinate dehydrogenase, cytochrome b556; succinate dehydrogenase, membrane subunit, binds cytochrome b556 755177..755566 Escherichia coli str. K-12 substr. MG1655 945316 b0722 CDS sdhD NC_000913.3 755560 755907 D succinate dehydrogenase, hydrophobic subunit; succinate dehydrogenase, membrane subunit, binds cytochrome b556 755560..755907 Escherichia coli str. K-12 substr. MG1655 945322 b0723 CDS sdhA NC_000913.3 755907 757673 D succinate dehydrogenase, flavoprotein subunit 755907..757673 Escherichia coli str. K-12 substr. MG1655 945402 b0724 CDS sdhB NC_000913.3 757689 758405 D succinate dehydrogenase, iron sulfur protein; succinate dehydrogenase, FeS subunit 757689..758405 Escherichia coli str. K-12 substr. MG1655 945300 b0726 CDS sucA NC_000913.3 758706 761507 D 2-oxoglutarate dehydrogenase (decarboxylase component); 2-oxoglutarate decarboxylase, thiamine triphosphate-binding 758706..761507 Escherichia coli str. K-12 substr. MG1655 945303 b0727 CDS sucB NC_000913.3 761522 762739 D 2-oxoglutarate dehydrogenase (dihydrolipoyltranssuccinase E2 component); dihydrolipoyltranssuccinase 761522..762739 Escherichia coli str. K-12 substr. MG1655 945307 b0728 CDS sucC NC_000913.3 763014 764180 D succinyl-CoA synthetase, beta subunit 763014..764180 Escherichia coli str. K-12 substr. MG1655 945312 b0729 CDS sucD NC_000913.3 764180 765049 D succinyl-CoA synthetase, alpha subunit; succinyl-CoA synthetase, NAD(P)-binding, alpha subunit 764180..765049 Escherichia coli str. K-12 substr. MG1655 945314 b0730 CDS mngR NC_000913.3 765153 765875 R transcriptional regulator of succinylCoA synthetase operon; transcriptional repressor for the mannosyl-D-glycerate catabolic operon complement(765153..765875) Escherichia coli str. K-12 substr. MG1655 945371 b0731 CDS mngA NC_000913.3 765984 767960 D protein modification enzyme, induction of ompC; fused 2-O-a-mannosyl-D-glycerate specific PTS enzymes: IIA component/IIB component/IIC component 765984..767960 Escherichia coli str. K-12 substr. MG1655 945355 b0732 CDS mngB NC_000913.3 767978 770611 D putative sugar hydrolase; alpha-mannosidase 767978..770611 Escherichia coli str. K-12 substr. MG1655 945359 b0733 CDS cydA NC_000913.3 771458 773026 D cytochrome d terminal oxidase, polypeptide subunit I; cytochrome d terminal oxidase, subunit I 771458..773026 Escherichia coli str. K-12 substr. MG1655 945341 b0734 CDS cydB NC_000913.3 773042 774181 D cytochrome d terminal oxidase polypeptide subunit II; cytochrome d terminal oxidase, subunit II 773042..774181 Escherichia coli str. K-12 substr. MG1655 945347 b4515 CDS cydX NC_000913.3 774196 774309 D cytochrome d (bd-I) ubiquinol oxidase subunit X 774196..774309 Escherichia coli str. K-12 substr. MG1655 1450246 b0735 CDS ybgE NC_000913.3 774309 774602 D putative inner membrane protein in cydABX-ybgE operon 774309..774602 Escherichia coli str. K-12 substr. MG1655 945326 b0736 CDS ybgC NC_000913.3 774752 775156 D acyl-CoA thioester hydrolase 774752..775156 Escherichia coli str. K-12 substr. MG1655 948907 b0737 CDS tolQ NC_000913.3 775153 775845 D inner membrane protein, membrane-spanning, maintains integrity of cell envelope; tolerance to group A colicins; membrane spanning protein in TolA-TolQ-TolR complex 775153..775845 Escherichia coli str. K-12 substr. MG1655 948900 b0738 CDS tolR NC_000913.3 775849 776277 D putative inner membrane protein, involved in the tonB-independent uptake of group A colicins; membrane spanning protein in TolA-TolQ-TolR complex 775849..776277 Escherichia coli str. K-12 substr. MG1655 945328 b0739 CDS tolA NC_000913.3 776342 777607 D membrane spanning protein, required for outer membrane integrity; membrane anchored protein in TolA-TolQ-TolR complex 776342..777607 Escherichia coli str. K-12 substr. MG1655 946625 b0740 CDS tolB NC_000913.3 777740 779032 D periplasmic protein involved in the tonb-independent uptake of group A colicins; periplasmic protein 777740..779032 Escherichia coli str. K-12 substr. MG1655 945429 b0741 CDS pal NC_000913.3 779067 779588 D peptidoglycan-associated lipoprotein; peptidoglycan-associated outer membrane lipoprotein 779067..779588 Escherichia coli str. K-12 substr. MG1655 945004 b0742 CDS ybgF NC_000913.3 779598 780389 D periplasmic TolA-binding protein 779598..780389 Escherichia coli str. K-12 substr. MG1655 947227 b0750 CDS nadA NC_000913.3 782085 783128 D quinolinate synthetase, A protein; quinolinate synthase, subunit A 782085..783128 Escherichia coli str. K-12 substr. MG1655 945351 b0751 CDS pnuC NC_000913.3 783166 783885 D required for NMN transport; nicotinamide riboside transporter 783166..783885 Escherichia coli str. K-12 substr. MG1655 945350 b0752 CDS zitB NC_000913.3 783882 784823 R putative transport system permease protein; zinc efflux system complement(783882..784823) Escherichia coli str. K-12 substr. MG1655 945348 b0753 CDS ybgS NC_000913.3 784937 785317 R putative homeobox protein; putative periplasmic protein complement(784937..785317) Escherichia coli str. K-12 substr. MG1655 945356 b0754 CDS aroG NC_000913.3 785633 786685 D 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase, phenylalanine repressible); 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, phenylalanine repressible 785633..786685 Escherichia coli str. K-12 substr. MG1655 945605 b0755 CDS gpmA NC_000913.3 786843 787595 R phosphoglyceromutase 1 complement(786843..787595) Escherichia coli str. K-12 substr. MG1655 945068 b0756 CDS galM NC_000913.3 787797 788837 R aldose 1-epimerase; type-1 mutarotase; galactose mutarotase complement(787797..788837) Escherichia coli str. K-12 substr. MG1655 944943 b0757 CDS galK NC_000913.3 788831 789979 R galactokinase complement(788831..789979) Escherichia coli str. K-12 substr. MG1655 945358 b0758 CDS galT NC_000913.3 789983 791029 R galactose-1-phosphate uridylyltransferase complement(789983..791029) Escherichia coli str. K-12 substr. MG1655 945357 b0759 CDS galE NC_000913.3 791039 792055 R UDP-galactose-4-epimerase complement(791039..792055) Escherichia coli str. K-12 substr. MG1655 945354 b0760 CDS modF NC_000913.3 792316 793788 R ATP-binding component of molybdate transport system; molybdate ABC transporter ATPase complement(792316..793788) Escherichia coli str. K-12 substr. MG1655 945368 b0761 CDS modE NC_000913.3 793856 794644 R molybdate uptake regulatory protein; transcriptional repressor for the molybdenum transport operon modABC complement(793856..794644) Escherichia coli str. K-12 substr. MG1655 945366 b0762 CDS acrZ NC_000913.3 794773 794922 D AcrAB-TolC efflux pump accessory protein, membrane-associated 794773..794922 Escherichia coli str. K-12 substr. MG1655 945365 b0763 CDS modA NC_000913.3 795089 795862 D molybdate-binding periplasmic protein; permease; periplasmic-binding component of ABC superfamily; molybdate ABC transporter periplasmic binding protein; chlorate resistance protein 795089..795862 Escherichia coli str. K-12 substr. MG1655 945364 b0764 CDS modB NC_000913.3 795862 796551 D molybdate transport permease protein; membrane component of ABC superfamily; molybdate ABC transporter permease; chlorate resistance protein 795862..796551 Escherichia coli str. K-12 substr. MG1655 945361 b0765 CDS modC NC_000913.3 796554 797612 D ATP-binding component of molybdate transport; molybdate ABC transporter ATPase; chlorate resistance protein 796554..797612 Escherichia coli str. K-12 substr. MG1655 945362 b0766 CDS ybhA NC_000913.3 797613 798431 R putative phosphatase; pyridoxal phosphate (PLP) phosphatase complement(797613..798431) Escherichia coli str. K-12 substr. MG1655 945372 b0767 CDS pgl NC_000913.3 798586 799581 D putative isomerase; 6-phosphogluconolactonase 798586..799581 Escherichia coli str. K-12 substr. MG1655 946398 b0768 CDS ybhD NC_000913.3 799622 800575 R putative transcriptional regulator LYSR-type; putative DNA-binding transcriptional regulator complement(799622..800575) Escherichia coli str. K-12 substr. MG1655 944869 b0769 CDS ybhH NC_000913.3 800759 801811 D putative PrpF family isomerase 800759..801811 Escherichia coli str. K-12 substr. MG1655 945375 b0770 CDS ybhI NC_000913.3 801887 803320 D putative membrane pump protein; putative DASS family tricarboxylate or dicarboxylate transporter 801887..803320 Escherichia coli str. K-12 substr. MG1655 945377 b0771 CDS ybhJ NC_000913.3 803503 805764 D putative enzyme; aconitase family protein 803503..805764 Escherichia coli str. K-12 substr. MG1655 945380 b0772 CDS ybhC NC_000913.3 805998 807281 R putative pectinesterase; acyl-CoA thioesterase, lipoprotein complement(805998..807281) Escherichia coli str. K-12 substr. MG1655 945381 b0773 CDS ybhB NC_000913.3 807433 807909 R kinase inhibitor homolog, UPF0098 family complement(807433..807909) Escherichia coli str. K-12 substr. MG1655 945383 b0774 CDS bioA NC_000913.3 807968 809257 R 7,8-diaminopelargonic acid synthetase; 7,8-diaminopelargonic acid synthase, PLP-dependent complement(807968..809257) Escherichia coli str. K-12 substr. MG1655 945376 b0775 CDS bioB NC_000913.3 809344 810384 D biotin synthesis, sulfur insertion?; biotin synthase 809344..810384 Escherichia coli str. K-12 substr. MG1655 945370 b0776 CDS bioF NC_000913.3 810381 811535 D 8-amino-7-oxononanoate synthase 810381..811535 Escherichia coli str. K-12 substr. MG1655 945384 b0777 CDS bioC NC_000913.3 811522 812277 D biotin biosynthesis; reaction prior to pimeloyl CoA; malonyl-ACP O-methyltransferase, SAM-dependent 811522..812277 Escherichia coli str. K-12 substr. MG1655 945388 b0778 CDS bioD NC_000913.3 812270 812947 D dethiobiotin synthetase 812270..812947 Escherichia coli str. K-12 substr. MG1655 945387 b0779 CDS uvrB NC_000913.3 813526 815547 D DNA repair; excision nuclease subunit B; exision nuclease of nucleotide excision repair, DNA damage recognition component 813526..815547 Escherichia coli str. K-12 substr. MG1655 945385 b0780 CDS ybhK NC_000913.3 815739 816647 R putative structural protein; putative CofD superfamily transferase complement(815739..816647) Escherichia coli str. K-12 substr. MG1655 945390 b0781 CDS moaA NC_000913.3 817044 818033 D molybdopterin biosynthesis, protein A; molybdopterin biosynthesis protein A 817044..818033 Escherichia coli str. K-12 substr. MG1655 945392 b0782 CDS moaB NC_000913.3 818055 818567 D moaB is not required for molybdopterin biosynthesis; inactive molybdopterin adenylyltransferase 818055..818567 Escherichia coli str. K-12 substr. MG1655 945396 b0783 CDS moaC NC_000913.3 818570 819055 D molybdopterin biosynthesis, protein C 818570..819055 Escherichia coli str. K-12 substr. MG1655 945397 b0784 CDS moaD NC_000913.3 819048 819293 D molybdopterin biosynthesis; molybdopterin synthase, small subunit 819048..819293 Escherichia coli str. K-12 substr. MG1655 945398 b0785 CDS moaE NC_000913.3 819295 819747 D molybdopterin converting factor, subunit 2; molybdopterin synthase, large subunit 819295..819747 Escherichia coli str. K-12 substr. MG1655 945399 b0786 CDS ybhL NC_000913.3 819884 820588 D putative acetate transporter; BAX Inhibitor-1 family inner membrane protein 819884..820588 Escherichia coli str. K-12 substr. MG1655 945401 b0787 CDS ybhM NC_000913.3 820793 821506 D BAX Inhibitor-1 family inner membrane protein 820793..821506 Escherichia coli str. K-12 substr. MG1655 949001 b0788 CDS ybhN NC_000913.3 821542 822498 R UPF0104 family inner membrane protein complement(821542..822498) Escherichia coli str. K-12 substr. MG1655 945410 b0789 CDS clsB NC_000913.3 822498 823739 R cardiolipin synthase activity; cardiolipin synthase 2 complement(822498..823739) Escherichia coli str. K-12 substr. MG1655 945409 b0790 CDS ybhP NC_000913.3 823736 824497 R endo/exonuclease/phosphatase family protein complement(823736..824497) Escherichia coli str. K-12 substr. MG1655 945408 b0791 CDS ybhQ NC_000913.3 824630 825040 D inner membrane protein 824630..825040 Escherichia coli str. K-12 substr. MG1655 945405 b0792 CDS ybhR NC_000913.3 825002 826108 R putative ABC transporter permease complement(825002..826108) Escherichia coli str. K-12 substr. MG1655 945403 b0793 CDS ybhS NC_000913.3 826119 827252 R putative ABC transporter permease complement(826119..827252) Escherichia coli str. K-12 substr. MG1655 945411 b0794 CDS ybhF NC_000913.3 827245 828981 R putative ATP-binding component of a transport system; putative ABC transporter ATPase complement(827245..828981) Escherichia coli str. K-12 substr. MG1655 945413 b0795 CDS ybhG NC_000913.3 828974 829972 R putative membrane protein; putative membrane fusion protein (MFP) component of efflux pump, membrane anchor complement(828974..829972) Escherichia coli str. K-12 substr. MG1655 945414 b0796 CDS ybiH NC_000913.3 829972 830643 R putative transcriptional regulator; DUF1956 domain-containing tetR family putative transcriptional regulator complement(829972..830643) Escherichia coli str. K-12 substr. MG1655 945421 b0797 CDS rhlE NC_000913.3 830872 832236 D putative ATP-dependent RNA helicase; ATP-dependent RNA helicase 830872..832236 Escherichia coli str. K-12 substr. MG1655 945425 b0798 CDS ybiA NC_000913.3 832468 832950 R DUF1768 family protein complement(832468..832950) Escherichia coli str. K-12 substr. MG1655 945426 b0799 CDS dinG NC_000913.3 833070 835220 D probably ATP-dependent helicase; ATP-dependent DNA helicase 833070..835220 Escherichia coli str. K-12 substr. MG1655 945431 b0800 CDS ybiB NC_000913.3 835248 836210 D putative enzyme; putative family 3 glycosyltransferase 835248..836210 Escherichia coli str. K-12 substr. MG1655 945424 b0801 CDS ybiC NC_000913.3 836351 837436 D putative dehydrogenase 836351..837436 Escherichia coli str. K-12 substr. MG1655 945412 b0802 CDS ybiJ NC_000913.3 837665 837925 R DUF1471 family putative periplasmic protein complement(837665..837925) Escherichia coli str. K-12 substr. MG1655 945433 b0803 CDS ybiI NC_000913.3 838190 838456 R DksA-type zinc finger protein complement(838190..838456) Escherichia coli str. K-12 substr. MG1655 945434 b0804 CDS ybiX NC_000913.3 838530 839207 R putative enzyme; Fe(II)-dependent oxygenase superfamily protein complement(838530..839207) Escherichia coli str. K-12 substr. MG1655 947502 b0805 CDS fiu NC_000913.3 839249 841531 R ferric iron outer membrane transporter, TonB-dependent; siderophore receptor for ferri-dihydroxybenzoylserine, ferri-dihydroxybenzoate and other catecholate siderophores; surface receptor for colicins G, H, and E492; catecholate siderophore receptor complement(839249..841531) Escherichia coli str. K-12 substr. MG1655 946246 b0806 CDS mcbA NC_000913.3 841796 842056 R colanic acid mucoidy stimulation protein complement(841796..842056) Escherichia coli str. K-12 substr. MG1655 947523 b0807 CDS rlmF NC_000913.3 842332 843258 D 23S rRNA m(6)A1618 methyltransferase, SAM-dependent 842332..843258 Escherichia coli str. K-12 substr. MG1655 944938 b0808 CDS ybiO NC_000913.3 843255 845480 R putative transport protein; mechanosensitive channel protein, intermediate conductance complement(843255..845480) Escherichia coli str. K-12 substr. MG1655 945935 b0809 CDS glnQ NC_000913.3 845741 846463 R ATP-binding component of glutamine high-affinity transport system; glutamine transporter subunit complement(845741..846463) Escherichia coli str. K-12 substr. MG1655 945435 b0810 CDS glnP NC_000913.3 846460 847119 R glutamine high-affinity transport system; membrane component; glutamine transporter subunit complement(846460..847119) Escherichia coli str. K-12 substr. MG1655 945621 b0811 CDS glnH NC_000913.3 847258 848004 R periplasmic glutamine-binding protein; permease; glutamine transporter subunit complement(847258..848004) Escherichia coli str. K-12 substr. MG1655 944872 b0812 CDS dps NC_000913.3 848408 848911 R global regulator, starvation conditions; Fe-binding and storage protein; stress-inducible DNA-binding protein complement(848408..848911) Escherichia coli str. K-12 substr. MG1655 945101 b0813 CDS rhtA NC_000913.3 849210 850097 R putative transmembrane subunit; threonine and homoserine efflux system complement(849210..850097) Escherichia coli str. K-12 substr. MG1655 947045 b0814 CDS ompX NC_000913.3 850450 850965 D outer membrane protein X 850450..850965 Escherichia coli str. K-12 substr. MG1655 944967 b0815 CDS opgE NC_000913.3 851014 852597 R putative enzyme; OPG biosynthetic transmembrane phosphoethanolamine transferase complement(851014..852597) Escherichia coli str. K-12 substr. MG1655 945360 b4705 CDS mntS NC_000913.3 852869 852997 R Mn(2)-response protein, MntR-repressed complement(852869..852997) Escherichia coli str. K-12 substr. MG1655 14678509 b0817 CDS mntR NC_000913.3 853183 853650 D Mn(2+)-responsive manganese regulon transcriptional regulator 853183..853650 Escherichia coli str. K-12 substr. MG1655 945437 b0818 CDS ybiR NC_000913.3 853647 854765 D putative transporter 853647..854765 Escherichia coli str. K-12 substr. MG1655 945438 b0819 CDS ldtB NC_000913.3 854824 855744 R L,D-transpeptidase linking Lpp to murein complement(854824..855744) Escherichia coli str. K-12 substr. MG1655 945441 b0820 CDS ybiT NC_000913.3 855963 857555 D putative ATP-binding component of a transport system; ABC-F family putative regulatory ATPase 855963..857555 Escherichia coli str. K-12 substr. MG1655 945440 b0821 CDS ybiU NC_000913.3 857796 859061 R DUF1479 family protein complement(857796..859061) Escherichia coli str. K-12 substr. MG1655 945439 b0822 CDS ybiV NC_000913.3 859213 860028 R sugar phosphatase; fructose-1-P/ribose-5-P/glucose-6-P phosphatase complement(859213..860028) Escherichia coli str. K-12 substr. MG1655 945432 b0823 CDS ybiW NC_000913.3 860174 862606 R putative pyruvate formate lyase complement(860174..862606) Escherichia coli str. K-12 substr. MG1655 945444 b0824 CDS ybiY NC_000913.3 862612 863511 R putative pyruvate formate lyase activating enzyme complement(862612..863511) Escherichia coli str. K-12 substr. MG1655 945445 b0825 CDS fsaA NC_000913.3 863642 864304 D fructose-6-phosphate aldolase; fructose-6-phosphate aldolase 1 863642..864304 Escherichia coli str. K-12 substr. MG1655 945449 b0826 CDS moeB NC_000913.3 864380 865129 R molybdopterin biosynthesis; molybdopterin synthase sulfurylase complement(864380..865129) Escherichia coli str. K-12 substr. MG1655 945452 b0827 CDS moeA NC_000913.3 865129 866364 R molybdopterin biosynthesis; molybdopterin molybdenumtransferase; molybdopterin biosynthesis protein complement(865129..866364) Escherichia coli str. K-12 substr. MG1655 945454 b0828 CDS iaaA NC_000913.3 866568 867533 D putative asparaginase; Isoaspartyl peptidase 866568..867533 Escherichia coli str. K-12 substr. MG1655 945456 b0829 CDS gsiA NC_000913.3 867520 869391 D putative ATP-binding component of a transport system; glutathione ABC transporter ATPase 867520..869391 Escherichia coli str. K-12 substr. MG1655 945457 b0830 CDS gsiB NC_000913.3 869411 870949 D putative transport protein; glutathione ABC transporter periplasmic binding protein 869411..870949 Escherichia coli str. K-12 substr. MG1655 945459 b0831 CDS gsiC NC_000913.3 870967 871887 D putative transport system permease protein; glutathione ABC transporter permease 870967..871887 Escherichia coli str. K-12 substr. MG1655 945460 b0832 CDS gsiD NC_000913.3 871890 872801 D putative transport system permease protein; glutathione ABC transporter permease 871890..872801 Escherichia coli str. K-12 substr. MG1655 945461 b0833 CDS yliE NC_000913.3 872979 875327 D putative membrane-anchored cyclic-di-GMP phosphodiesterase 872979..875327 Escherichia coli str. K-12 substr. MG1655 945462 b0834 CDS yliF NC_000913.3 875335 876663 D putative membrane-anchored diguanylate cyclase 875335..876663 Escherichia coli str. K-12 substr. MG1655 945463 b0835 CDS rimO NC_000913.3 876710 878035 R ribosomal protein S12 methylthiotransferase complement(876710..878035) Escherichia coli str. K-12 substr. MG1655 945465 b0836 CDS bssR NC_000913.3 878248 878631 D putative receptor; repressor of biofilm formation by indole transport regulation 878248..878631 Escherichia coli str. K-12 substr. MG1655 945466 b0837 CDS yliI NC_000913.3 878742 879857 D putative dehydrogenase; soluble aldose sugar dehydrogenase 878742..879857 Escherichia coli str. K-12 substr. MG1655 945467 b0838 CDS gstB NC_000913.3 879854 880480 R putative transferase; glutathione S-transferase complement(879854..880480) Escherichia coli str. K-12 substr. MG1655 945469 b0839 CDS dacC NC_000913.3 880727 881929 D D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6; D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6a 880727..881929 Escherichia coli str. K-12 substr. MG1655 945455 b0840 CDS deoR NC_000913.3 881976 882734 R transcriptional repressor for deo operon, tsx, nupG; deoxyribose-5-phosphate-inducible deoxyribose operon transcriptional repressor; repressor of nupG and tsx complement(881976..882734) Escherichia coli str. K-12 substr. MG1655 945453 b0841 CDS ybjG NC_000913.3 882792 883388 R undecaprenyl pyrophosphate phosphatase complement(882792..883388) Escherichia coli str. K-12 substr. MG1655 945450 b0842 CDS mdfA NC_000913.3 883673 884905 D proton motive force efflux pump; multidrug efflux system protein 883673..884905 Escherichia coli str. K-12 substr. MG1655 945448 b0843 CDS ybjH NC_000913.3 884946 885230 R uncharacterized protein complement(884946..885230) Escherichia coli str. K-12 substr. MG1655 945447 b0844 CDS ybjI NC_000913.3 885316 886131 R 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase; pyrimidine phosphatase; riboflavin synthesis complement(885316..886131) Escherichia coli str. K-12 substr. MG1655 945470 b0845 CDS ybjJ NC_000913.3 886131 887339 R putative DEOR-type transcriptional regulator; putative drug efflux MFS transporter, inner membrane protein complement(886131..887339) Escherichia coli str. K-12 substr. MG1655 945471 b0846 CDS rcdA NC_000913.3 887423 887959 D putative DEOR-type transcriptional regulator; transcriptional regulator of csgD and ybiJI; autoregulator 887423..887959 Escherichia coli str. K-12 substr. MG1655 945473 b0847 CDS ybjL NC_000913.3 888134 889819 R putative transport protein; putative transporter complement(888134..889819) Escherichia coli str. K-12 substr. MG1655 945474 b0848 CDS ybjM NC_000913.3 890089 890466 D inner membrane protein 890089..890466 Escherichia coli str. K-12 substr. MG1655 945477 b0849 CDS grxA NC_000913.3 890496 890753 R glutaredoxin1 redox coenzyme for glutathione-dependent ribonucleotide reductase; glutaredoxin 1, redox coenzyme for ribonucleotide reductase (RNR1a) complement(890496..890753) Escherichia coli str. K-12 substr. MG1655 945479 b0850 CDS ybjC NC_000913.3 890913 891200 D DUF1418 family protein 890913..891200 Escherichia coli str. K-12 substr. MG1655 945481 b0851 CDS nfsA NC_000913.3 891184 891906 D nitroreductase A, NADPH-dependent, FMN-dependent 891184..891906 Escherichia coli str. K-12 substr. MG1655 945483 b0852 CDS rimK NC_000913.3 891967 892869 D ribosomal protein S6 modification protein 891967..892869 Escherichia coli str. K-12 substr. MG1655 945484 b0853 CDS ybjN NC_000913.3 892957 893433 D putative sensory transduction regulator; negative regulator of motility; multicopy suppressor of coaA(Ts) 892957..893433 Escherichia coli str. K-12 substr. MG1655 945482 b0854 CDS potF NC_000913.3 893784 894896 D periplasmic putrescine-binding protein; permease protein; putrescine ABC transporter periplasmic binding protein 893784..894896 Escherichia coli str. K-12 substr. MG1655 945480 b0855 CDS potG NC_000913.3 894991 896124 D ATP-binding component of putrescine transport system; putrescine ABC transporter ATPase 894991..896124 Escherichia coli str. K-12 substr. MG1655 945476 b0856 CDS potH NC_000913.3 896134 897087 D putrescine transport protein; permease; putrescine ABC transporter permease 896134..897087 Escherichia coli str. K-12 substr. MG1655 945475 b0857 CDS potI NC_000913.3 897084 897929 D putrescine transport protein; permease; putrescine ABC transporter permease 897084..897929 Escherichia coli str. K-12 substr. MG1655 945485 b0858 CDS ybjO NC_000913.3 897989 898477 D DUF2593 family inner membrane protein 897989..898477 Escherichia coli str. K-12 substr. MG1655 945488 b0859 CDS rlmC NC_000913.3 898518 899645 D putative enzyme; 23S rRNA m(5)U747 methyltransferase, SAM-dependent 898518..899645 Escherichia coli str. K-12 substr. MG1655 947260 b0860 CDS artJ NC_000913.3 899844 900575 R arginine 3rd transport system periplasmic binding protein; arginine ABC transporter periplasmic binding protein complement(899844..900575) Escherichia coli str. K-12 substr. MG1655 948981 b0861 CDS artM NC_000913.3 900866 901534 R arginine 3rd transport system permease protein; membrane component of ABC superfamily; arginine ABC transporter permease complement(900866..901534) Escherichia coli str. K-12 substr. MG1655 949066 b0862 CDS artQ NC_000913.3 901534 902250 R arginine 3rd transport system permease protein; membrane component of ABC superfamily; arginine ABC transporter permease complement(901534..902250) Escherichia coli str. K-12 substr. MG1655 949046 b0863 CDS artI NC_000913.3 902257 902988 R arginine 3rd transport system periplasmic binding protein; arginine transporter subunit complement(902257..902988) Escherichia coli str. K-12 substr. MG1655 948988 b0864 CDS artP NC_000913.3 903006 903734 R ATP-binding component of 3rd arginine transport system; arginine ABC transporter ATPase complement(903006..903734) Escherichia coli str. K-12 substr. MG1655 945489 b0865 CDS ybjP NC_000913.3 903952 904467 R putative lipoprotein; lipoprotein complement(903952..904467) Escherichia coli str. K-12 substr. MG1655 945491 b0866 CDS ybjQ NC_000913.3 904593 904916 D UPF0145 family protein 904593..904916 Escherichia coli str. K-12 substr. MG1655 945493 b0867 CDS amiD NC_000913.3 904913 905743 D 1,6-anhydro-N-acetylmuramyl-L-alanine amidase, Zn-dependent; OM lipoprotein 904913..905743 Escherichia coli str. K-12 substr. MG1655 945494 b0868 CDS ybjS NC_000913.3 905740 906753 R putative NAD(P)H-dependent oxidoreductase complement(905740..906753) Escherichia coli str. K-12 substr. MG1655 945495 b0869 CDS ybjT NC_000913.3 906852 908282 R putative NAD-dependent oxidoreductase complement(906852..908282) Escherichia coli str. K-12 substr. MG1655 945496 b0870 CDS ltaE NC_000913.3 908293 909294 R L-allo-threonine aldolase, PLP-dependent complement(908293..909294) Escherichia coli str. K-12 substr. MG1655 944955 b0871 CDS poxB NC_000913.3 909331 911049 R pyruvate oxidase; pyruvate dehydrogenase, thiamine triphosphate-binding, FAD-binding complement(909331..911049) Escherichia coli str. K-12 substr. MG1655 946132 b0872 CDS hcr NC_000913.3 911182 912150 R HCP oxidoreductase, NADH-dependent complement(911182..912150) Escherichia coli str. K-12 substr. MG1655 947660 b0873 CDS hcp NC_000913.3 912162 913814 R hybrid-cluster [4Fe-2S-2O] subunit of anaerobic terminal reductases complement(912162..913814) Escherichia coli str. K-12 substr. MG1655 946592 b0874 CDS ybjE NC_000913.3 913958 914857 R putative surface protein; putative transporter complement(913958..914857) Escherichia coli str. K-12 substr. MG1655 947142 b0875 CDS aqpZ NC_000913.3 915352 916047 R transmembrane water channel; aquaporin Z; aquaporin Z complement(915352..916047) Escherichia coli str. K-12 substr. MG1655 945497 b0876 CDS ybjD NC_000913.3 916473 918131 D putative OLD family ATP-dependent endonuclease; DUF2813 family protein 916473..918131 Escherichia coli str. K-12 substr. MG1655 945498 b0877 CDS ybjX NC_000913.3 918128 919120 R putative enzyme; DUF535 family protein complement(918128..919120) Escherichia coli str. K-12 substr. MG1655 946025 b0878 CDS macA NC_000913.3 919235 920350 D macrolide transporter membrane fusion protein (MFP) component 919235..920350 Escherichia coli str. K-12 substr. MG1655 947322 b0879 CDS macB NC_000913.3 920347 922293 D macrolide ABC transporter peremase/ATPase 920347..922293 Escherichia coli str. K-12 substr. MG1655 945164 b0880 CDS cspD NC_000913.3 922366 922590 R stress induced DNA replication inhibitor.; inhibitor of DNA replication, cold shock protein homolog complement(922366..922590) Escherichia coli str. K-12 substr. MG1655 945669 b0881 CDS clpS NC_000913.3 922913 923233 D regulatory protein for ClpA substrate specificity 922913..923233 Escherichia coli str. K-12 substr. MG1655 948443 b0882 CDS clpA NC_000913.3 923264 925540 D ATP-binding component of serine protease; ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine protease, chaperone activity 923264..925540 Escherichia coli str. K-12 substr. MG1655 945764 b0884 CDS infA NC_000913.3 926225 926443 R protein chain initiation factor IF-1; translation initiation factor IF-1 complement(926225..926443) Escherichia coli str. K-12 substr. MG1655 945500 b0885 CDS aat NC_000913.3 926728 927432 R leucyl, phenylalanyl-tRNA-protein transferase; leucyl/phenylalanyl-tRNA-protein transferase complement(926728..927432) Escherichia coli str. K-12 substr. MG1655 945490 b0886 CDS cydC NC_000913.3 927474 929195 R ATP-binding component of cytochrome-related transport; glutathione/cysteine ABC transporter export permease/ATPase complement(927474..929195) Escherichia coli str. K-12 substr. MG1655 945504 b0887 CDS cydD NC_000913.3 929196 930962 R ATP-binding component of cytochrome-related transport, Zn sensitive; glutathione/cysteine ABC transporter export permease/ATPase complement(929196..930962) Escherichia coli str. K-12 substr. MG1655 949052 b0888 CDS trxB NC_000913.3 931085 932050 R thioredoxin reductase; thioredoxin reductase, FAD/NAD(P)-binding complement(931085..932050) Escherichia coli str. K-12 substr. MG1655 949054 b0889 CDS lrp NC_000913.3 932595 933089 D regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system; leucine-responsive global transcriptional regulator 932595..933089 Escherichia coli str. K-12 substr. MG1655 949051 b0890 CDS ftsK NC_000913.3 933224 937213 D cell division protein; DNA translocase at septal ring sorting daughter chromsomes 933224..937213 Escherichia coli str. K-12 substr. MG1655 945102 b0891 CDS lolA NC_000913.3 937372 937983 D periplasmic protein effects translocation of lipoproteins from inner membrane to outer; lipoprotein chaperone 937372..937983 Escherichia coli str. K-12 substr. MG1655 948989 b0892 CDS rarA NC_000913.3 937994 939337 D putative polynucleotide enzyme; recombination intermediate processing DNA-dependent ATPase 937994..939337 Escherichia coli str. K-12 substr. MG1655 945505 b0893 CDS serS NC_000913.3 939428 940720 D serine tRNA synthetase; also charges selenocystein tRNA with serine; seryl-tRNA synthetase 939428..940720 Escherichia coli str. K-12 substr. MG1655 945506 b0894 CDS dmsA NC_000913.3 940959 943403 D anaerobic dimethyl sulfoxide reductase subunit A; dimethyl sulfoxide reductase, anaerobic, subunit A 940959..943403 Escherichia coli str. K-12 substr. MG1655 945508 b0895 CDS dmsB NC_000913.3 943414 944031 D anaerobic dimethyl sulfoxide reductase subunit B; dimethyl sulfoxide reductase, anaerobic, subunit B 943414..944031 Escherichia coli str. K-12 substr. MG1655 945507 b0896 CDS dmsC NC_000913.3 944033 944896 D anaerobic dimethyl sulfoxide reductase subunit C; dimethyl sulfoxide reductase, anaerobic, subunit C 944033..944896 Escherichia coli str. K-12 substr. MG1655 945502 b0897 CDS ycaC NC_000913.3 944931 945557 R putative isochorismatase family hydrolase complement(944931..945557) Escherichia coli str. K-12 substr. MG1655 945512 b0898 CDS ycaD NC_000913.3 945871 947019 D putative MFS transporter, inner membrane protein 945871..947019 Escherichia coli str. K-12 substr. MG1655 945515 b0899 CDS ycaM NC_000913.3 947229 948659 D putative transporter 947229..948659 Escherichia coli str. K-12 substr. MG1655 945518 b0900 CDS ycaN NC_000913.3 948660 949568 R putative transcriptional regulator LYSR-type; LysR family putative transcriptional regulator complement(948660..949568) Escherichia coli str. K-12 substr. MG1655 945523 b0901 CDS ycaK NC_000913.3 949668 950258 D putative NAD(P)H-dependent oxidoreductase 949668..950258 Escherichia coli str. K-12 substr. MG1655 945520 b0902 CDS pflA NC_000913.3 950340 951080 R pyruvate formate-lyase 1-activating enzyme; [formate-C-acetyltransferase 1]-activating enzyme; PFL activase complement(950340..951080) Escherichia coli str. K-12 substr. MG1655 945517 b0903 CDS pflB NC_000913.3 951272 953554 R formate acetyltransferase 1; formate C-acetyltransferase 1, anaerobic; pyruvate formate-lyase 1 complement(951272..953554) Escherichia coli str. K-12 substr. MG1655 945514 b0904 CDS focA NC_000913.3 953609 954466 R probable formate transporter (formate channel 1); formate channel complement(953609..954466) Escherichia coli str. K-12 substr. MG1655 945513 b0905 CDS ycaO NC_000913.3 954872 956632 R ribosomal protein S12 methylthiotransferase accessory factor complement(954872..956632) Escherichia coli str. K-12 substr. MG1655 945509 b0906 CDS ycaP NC_000913.3 956762 957454 D UPF0702 family putative inner membrane protein 956762..957454 Escherichia coli str. K-12 substr. MG1655 945525 b0907 CDS serC NC_000913.3 957653 958741 D 3-phosphoserine aminotransferase; 3-phosphoserine/phosphohydroxythreonine aminotransferase 957653..958741 Escherichia coli str. K-12 substr. MG1655 945527 b0908 CDS aroA NC_000913.3 958812 960095 D 5-enolpyruvylshikimate-3-phosphate synthetase 958812..960095 Escherichia coli str. K-12 substr. MG1655 945528 b0909 CDS ycaL NC_000913.3 960264 961028 D putative heat shock protein; putative peptidase-related chaperone 960264..961028 Escherichia coli str. K-12 substr. MG1655 945534 b0910 CDS cmk NC_000913.3 961201 961884 D cytidylate kinase 961201..961884 Escherichia coli str. K-12 substr. MG1655 945535 b0911 CDS rpsA NC_000913.3 961995 963668 D 30S ribosomal subunit protein S1 961995..963668 Escherichia coli str. K-12 substr. MG1655 945536 b0912 CDS ihfB NC_000913.3 963828 964112 D integration host factor (IHF), beta subunit; site-specific recombination; integration host factor (IHF), DNA-binding protein, beta subunit 963828..964112 Escherichia coli str. K-12 substr. MG1655 945533 b0913 CDS ycaI NC_000913.3 964320 966584 D ComEC family inner membrane protein 964320..966584 Escherichia coli str. K-12 substr. MG1655 945531 b0914 CDS msbA NC_000913.3 966621 968369 D ATP-binding transport protein; multicopy suppressor of htrB; lipid ABC transporter permease/ATPase 966621..968369 Escherichia coli str. K-12 substr. MG1655 945530 b0915 CDS lpxK NC_000913.3 968366 969352 D lipid A 4'kinase 968366..969352 Escherichia coli str. K-12 substr. MG1655 945526 b0916 CDS ycaQ NC_000913.3 969389 970621 D DUF1006 family protein with C-terminal wHTH domain 969389..970621 Escherichia coli str. K-12 substr. MG1655 945524 b0917 CDS ycaR NC_000913.3 970673 970855 D peroxide and acid resistance protein, UPF0434 family 970673..970855 Escherichia coli str. K-12 substr. MG1655 945537 b0918 CDS kdsB NC_000913.3 970852 971598 D CTP:CMP-3-deoxy-D-manno-octulosonate transferase; 3-deoxy-manno-octulosonate cytidylyltransferase 970852..971598 Escherichia coli str. K-12 substr. MG1655 945539 b0919 CDS ycbJ NC_000913.3 971752 972645 D protein kinase-like domain protein 971752..972645 Escherichia coli str. K-12 substr. MG1655 945545 b0920 CDS elyC NC_000913.3 972622 973401 R envelope biogenesis factor; DUF218 superfamily protein complement(972622..973401) Escherichia coli str. K-12 substr. MG1655 945546 b0921 CDS smtA NC_000913.3 973537 974322 D S-adenosylmethionine-dependent methyltransferase; putative S-adenosyl-L-methionine-dependent methyltransferase 973537..974322 Escherichia coli str. K-12 substr. MG1655 945547 b0922 CDS mukF NC_000913.3 974319 975641 D mukF protein (killing factor KICB); chromosome condensin MukBEF, kleisin-like subunit, binds calcium 974319..975641 Escherichia coli str. K-12 substr. MG1655 945548 b0923 CDS mukE NC_000913.3 975622 976326 D chromosome condensin MukBEF, MukE localization factor 975622..976326 Escherichia coli str. K-12 substr. MG1655 945550 b0924 CDS mukB NC_000913.3 976326 980786 D kinesin-like cell division protein involved in chromosome partitioning; chromosome condensin MukBEF, ATPase and DNA-binding subunit 976326..980786 Escherichia coli str. K-12 substr. MG1655 945549 b0925 CDS ldtD NC_000913.3 981047 982894 D putative amidase; murein L,D-transpeptidase 981047..982894 Escherichia coli str. K-12 substr. MG1655 945541 b0926 CDS ycbK NC_000913.3 983075 983623 D M15A protease-related family periplasmic protein 983075..983623 Escherichia coli str. K-12 substr. MG1655 945538 b0927 CDS ycbL NC_000913.3 983650 984297 D putative metal-binding enzyme 983650..984297 Escherichia coli str. K-12 substr. MG1655 945551 b0928 CDS aspC NC_000913.3 984519 985709 R aspartate aminotransferase; aspartate aminotransferase, PLP-dependent complement(984519..985709) Escherichia coli str. K-12 substr. MG1655 945553 b0929 CDS ompF NC_000913.3 985894 986982 R outer membrane protein 1a (Ia;b;F); outer membrane porin 1a (Ia;b;F) complement(985894..986982) Escherichia coli str. K-12 substr. MG1655 945554 b0930 CDS asnS NC_000913.3 987585 988985 R asparagine tRNA synthetase; asparaginyl tRNA synthetase complement(987585..988985) Escherichia coli str. K-12 substr. MG1655 945555 b0931 CDS pncB NC_000913.3 989154 990356 R nicotinate phosphoribosyltransferase complement(989154..990356) Escherichia coli str. K-12 substr. MG1655 946648 b0932 CDS pepN NC_000913.3 990622 993234 D aminopeptidase N 990622..993234 Escherichia coli str. K-12 substr. MG1655 947253 b0933 CDS ssuB NC_000913.3 993277 994044 R ATP-binding component of ABC superfamily; aliphatic sulfonate ABC transporter ATPase complement(993277..994044) Escherichia coli str. K-12 substr. MG1655 947220 b0934 CDS ssuC NC_000913.3 994041 994832 R membrane component of ABC superfamily; aliphatic sulfonate ABC transporter permease complement(994041..994832) Escherichia coli str. K-12 substr. MG1655 947216 b0935 CDS ssuD NC_000913.3 994843 995988 R alkanesulfonate monooxygenase, FMNH(2)-dependent complement(994843..995988) Escherichia coli str. K-12 substr. MG1655 945557 b0936 CDS ssuA NC_000913.3 995985 996944 R periplasmic-binding component of ABC superfamily; aliphatic sulfonate ABC transporter periplasmic binding protein complement(995985..996944) Escherichia coli str. K-12 substr. MG1655 945560 b0937 CDS ssuE NC_000913.3 996937 997512 R NAD(P)H-dependent FMN reductase complement(996937..997512) Escherichia coli str. K-12 substr. MG1655 945947 b0938 CDS elfA NC_000913.3 997868 998407 D putative fimbrial-like protein; laminin-binding fimbrin subunit 997868..998407 Escherichia coli str. K-12 substr. MG1655 948306 b0939 CDS elfD NC_000913.3 998490 999191 D putative periplasmic pilin chaperone 998490..999191 Escherichia coli str. K-12 substr. MG1655 946773 b0940 CDS elfC NC_000913.3 999216 1001816 D putative outer membrane fimbrial subunit export usher protein 999216..1001816 Escherichia coli str. K-12 substr. MG1655 946934 b0941 CDS elfG NC_000913.3 1001807 1002877 D putative fimbrial-like adhesin protein 1001807..1002877 Escherichia coli str. K-12 substr. MG1655 947185 b0942 CDS ycbU NC_000913.3 1002889 1003431 D putative fimbrial-like protein; putative fimbriae protein 1002889..1003431 Escherichia coli str. K-12 substr. MG1655 945561 b0943 CDS ycbV NC_000913.3 1003439 1003954 D putative fimbrial-like protein; putative fimbrial-like adhesin protein 1003439..1003954 Escherichia coli str. K-12 substr. MG1655 945562 b0944 CDS ycbF NC_000913.3 1003947 1004657 D putative periplasmic pilin chaperone 1003947..1004657 Escherichia coli str. K-12 substr. MG1655 945559 b0945 CDS pyrD NC_000913.3 1004768 1005778 D dihydro-orotate dehydrogenase; dihydro-orotate oxidase, FMN-linked 1004768..1005778 Escherichia coli str. K-12 substr. MG1655 945556 b0946 CDS zapC NC_000913.3 1005952 1006494 D FtsZ stabilizer 1005952..1006494 Escherichia coli str. K-12 substr. MG1655 945552 b0947 CDS ycbX NC_000913.3 1006491 1007600 R 6-N-hydroxylaminopurine detoxification oxidoreductase complement(1006491..1007600) Escherichia coli str. K-12 substr. MG1655 945563 b0948 CDS rlmL NC_000913.3 1007844 1009952 D putative oxidoreductase; 23S rRNA m(2)G2445 and m(7)G2069 methyltransferases, SAM-dependent 1007844..1009952 Escherichia coli str. K-12 substr. MG1655 945564 b0949 CDS uup NC_000913.3 1009964 1011871 D putative ATP-binding component of a transport system; replication regulatory ABC-F family DNA-binding ATPase 1009964..1011871 Escherichia coli str. K-12 substr. MG1655 945566 b0950 CDS pqiA NC_000913.3 1012001 1013254 D paraquat-inducible protein A; paraquat-inducible, SoxRS-regulated inner membrane protein 1012001..1013254 Escherichia coli str. K-12 substr. MG1655 944999 b0951 CDS pqiB NC_000913.3 1013259 1014899 D paraquat-inducible, SoxRS-regulated MCE domain protein 1013259..1014899 Escherichia coli str. K-12 substr. MG1655 945653 b0952 CDS pqiC NC_000913.3 1014896 1015459 D DUF330 family putative lipoprotein 1014896..1015459 Escherichia coli str. K-12 substr. MG1655 946972 b0953 CDS rmf NC_000913.3 1015715 1015882 D ribosome modulation factor 1015715..1015882 Escherichia coli str. K-12 substr. MG1655 945567 b0954 CDS fabA NC_000913.3 1015952 1016470 R beta-hydroxydecanoyl thioester dehydrase, trans-2-decenoyl-ACP isomerase; beta-hydroxydecanoyl thioester dehydrase complement(1015952..1016470) Escherichia coli str. K-12 substr. MG1655 945568 b0955 CDS ycbZ NC_000913.3 1016539 1018299 R putative ATP-dependent protease; putative peptidase complement(1016539..1018299) Escherichia coli str. K-12 substr. MG1655 945569 b0956 CDS matP NC_000913.3 1018485 1018937 D putative dehydrogenase; Ter macrodomain organizer matS-binding protein 1018485..1018937 Escherichia coli str. K-12 substr. MG1655 945570 b0957 CDS ompA NC_000913.3 1019013 1020053 R outer membrane protein 3a (II*;G;d); outer membrane protein A (3a;II*;G;d) complement(1019013..1020053) Escherichia coli str. K-12 substr. MG1655 945571 b0958 CDS sulA NC_000913.3 1020410 1020919 R suppressor of lon; inhibits cell division and ftsZ ring formation; SOS cell division inhibitor complement(1020410..1020919) Escherichia coli str. K-12 substr. MG1655 947335 b0959 CDS sxy NC_000913.3 1021138 1021767 D CRP-S-dependent promoter expression factor 1021138..1021767 Escherichia coli str. K-12 substr. MG1655 946504 b0960 CDS yccS NC_000913.3 1021730 1023883 R putative transporter, FUSC superfamily inner membrane protein complement(1021730..1023883) Escherichia coli str. K-12 substr. MG1655 947001 b0961 CDS yccF NC_000913.3 1023902 1024348 R DUF307 family inner membrane protein complement(1023902..1024348) Escherichia coli str. K-12 substr. MG1655 945594 b0962 CDS helD NC_000913.3 1024471 1026525 D DNA helicase IV 1024471..1026525 Escherichia coli str. K-12 substr. MG1655 946227 b0963 CDS mgsA NC_000913.3 1026557 1027015 R methylglyoxal synthase complement(1026557..1027015) Escherichia coli str. K-12 substr. MG1655 945574 b0964 CDS yccT NC_000913.3 1027111 1027773 R UPF0319 family protein complement(1027111..1027773) Escherichia coli str. K-12 substr. MG1655 945577 b0965 CDS yccU NC_000913.3 1027946 1028359 D putative CoA-binding protein 1027946..1028359 Escherichia coli str. K-12 substr. MG1655 949008 b0966 CDS hspQ NC_000913.3 1028404 1028721 R heat shock protein involved in degradation of mutant DnaA; hemimethylated oriC DNA-binding protein complement(1028404..1028721) Escherichia coli str. K-12 substr. MG1655 945578 b0967 CDS rlmI NC_000913.3 1028779 1029969 R putative oxidoreductase; 23S rRNA m(5)C1962 methyltransferase, SAM-dependent complement(1028779..1029969) Escherichia coli str. K-12 substr. MG1655 946691 b0968 CDS yccX NC_000913.3 1030064 1030342 D weak acylphosphatase 1030064..1030342 Escherichia coli str. K-12 substr. MG1655 945304 b0969 CDS tusE NC_000913.3 1030339 1030668 R putative sulfite reductase; mnm(5)-s(2)U34-tRNA 2-thiolation sulfurtransferase complement(1030339..1030668) Escherichia coli str. K-12 substr. MG1655 945023 b0970 CDS yccA NC_000913.3 1030759 1031418 R putative carrier/transport protein; Modulator of FtsH protease, inner membrane protein complement(1030759..1031418) Escherichia coli str. K-12 substr. MG1655 946016 b0972 CDS hyaA NC_000913.3 1032139 1033257 D hydrogenase-1 small subunit; hydrogenase 1, small subunit 1032139..1033257 Escherichia coli str. K-12 substr. MG1655 945579 b0973 CDS hyaB NC_000913.3 1033254 1035047 D hydrogenase-1 large subunit; hydrogenase 1, large subunit 1033254..1035047 Escherichia coli str. K-12 substr. MG1655 945580 b0974 CDS hyaC NC_000913.3 1035066 1035773 D probable Ni/Fe-hydrogenase 1 b-type cytochrome subunit; hydrogenase 1, b-type cytochrome subunit 1035066..1035773 Escherichia coli str. K-12 substr. MG1655 945581 b0975 CDS hyaD NC_000913.3 1035770 1036357 D processing of HyaA and HyaB proteins; hydrogenase 1 maturation protease 1035770..1036357 Escherichia coli str. K-12 substr. MG1655 945575 b0976 CDS hyaE NC_000913.3 1036354 1036752 D processing of HyaA and HyaB proteins; putative HyaA chaperone 1036354..1036752 Escherichia coli str. K-12 substr. MG1655 945573 b0977 CDS hyaF NC_000913.3 1036749 1037606 D nickel incorporation into hydrogenase-1 proteins; hydrogenase-1 protein nickel incorporation factor 1036749..1037606 Escherichia coli str. K-12 substr. MG1655 945572 b0978 CDS cbdA NC_000913.3 1037740 1039284 D cytochrome bd-II oxidase, subunit I 1037740..1039284 Escherichia coli str. K-12 substr. MG1655 945585 b0979 CDS cbdB NC_000913.3 1039296 1040432 D probable third cytochrome oxidase, subunit II; cytochrome bd-II oxidase, subunit II 1039296..1040432 Escherichia coli str. K-12 substr. MG1655 947547 b4592 CDS cbdX NC_000913.3 1040445 1040537 D putative cytochrome bd-II oxidase subunit 1040445..1040537 Escherichia coli str. K-12 substr. MG1655 948955 b0980 CDS appA NC_000913.3 1040617 1041915 D phosphoanhydride phosphorylase; pH 2.5 acid phosphatase; periplasmic; phosphoanhydride phosphorylase 1040617..1041915 Escherichia coli str. K-12 substr. MG1655 946206 b0981 CDS etk NC_000913.3 1042030 1044210 R tyrosine-protein kinase, role in O-antigen capsule formation complement(1042030..1044210) Escherichia coli str. K-12 substr. MG1655 947409 b0982 CDS etp NC_000913.3 1044230 1044676 R putative phosphatase; O-antigen capsule forming protein-tyrosine-phosphatase; Etk-P dephosphorylase complement(1044230..1044676) Escherichia coli str. K-12 substr. MG1655 945236 b0983 CDS gfcE NC_000913.3 1044664 1045803 R putative function in exopolysaccharide production; putative O-antigen capsule outer membrane auxillary protein export channel complement(1044664..1045803) Escherichia coli str. K-12 substr. MG1655 945586 b0984 CDS gfcD NC_000913.3 1045849 1047945 R putative O-antigen capsule production periplasmic protein complement(1045849..1047945) Escherichia coli str. K-12 substr. MG1655 945588 b0985 CDS gfcC NC_000913.3 1047945 1048691 R putative O-antigen capsule production periplasmic protein complement(1047945..1048691) Escherichia coli str. K-12 substr. MG1655 944978 b0986 CDS gfcB NC_000913.3 1048688 1049332 R putative regulator; O-antigen capsule production lipoprotein complement(1048688..1049332) Escherichia coli str. K-12 substr. MG1655 949118 b0987 CDS gfcA NC_000913.3 1049439 1049744 R O-antigen capsule production threonine-rich inner membrane protein complement(1049439..1049744) Escherichia coli str. K-12 substr. MG1655 945029 b4516 CDS insA NC_000913.3 1049833 1050108 D IS1 repressor TnpA 1049833..1050108 Escherichia coli str. K-12 substr. MG1655 1450250 b0988 CDS insB1 NC_000913.3 1050027 1050530 D IS1 transposase B 1050027..1050530 Escherichia coli str. K-12 substr. MG1655 945009 b0989 CDS cspH NC_000913.3 1050963 1051175 R cold shock-like protein; stress protein, member of the CspA-family complement(1050963..1051175) Escherichia coli str. K-12 substr. MG1655 945590 b0990 CDS cspG NC_000913.3 1051461 1051673 D homolog of Salmonella cold shock protein; cold shock protein homolog, cold-inducible 1051461..1051673 Escherichia coli str. K-12 substr. MG1655 945591 b0991 CDS ymcE NC_000913.3 1051847 1052077 D suppresses fabA and ts growth mutation; cold shock gene 1051847..1052077 Escherichia coli str. K-12 substr. MG1655 946951 b4517 CDS gnsA NC_000913.3 1052067 1052240 D putative phosphatidylethanolamine synthesis regulator 1052067..1052240 Escherichia coli str. K-12 substr. MG1655 1450249 b0992 CDS yccM NC_000913.3 1052289 1053362 R putative 4Fe-4S membrane protein complement(1052289..1053362) Escherichia coli str. K-12 substr. MG1655 946295 b0993 CDS torS NC_000913.3 1053434 1056178 R hybrid sensory histidine kinase in two-component regulatory system with TorR complement(1053434..1056178) Escherichia coli str. K-12 substr. MG1655 945595 b0994 CDS torT NC_000913.3 1056261 1057289 D part of regulation of tor operon, periplasmic; periplasmic sensory protein associated with the TorRS two-component regulatory system 1056261..1057289 Escherichia coli str. K-12 substr. MG1655 946289 b0995 CDS torR NC_000913.3 1057262 1057954 R response transcriptional regulator for torA (sensor TorS); response regulator in two-component regulatory system with TorS complement(1057262..1057954) Escherichia coli str. K-12 substr. MG1655 946182 b0996 CDS torC NC_000913.3 1058084 1059256 D trimethylamine N-oxide reductase, cytochrome c-type subunit; trimethylamine N-oxide (TMAO) reductase I, cytochrome c-type subunit 1058084..1059256 Escherichia coli str. K-12 substr. MG1655 946252 b0997 CDS torA NC_000913.3 1059256 1061802 D trimethylamine N-oxide reductase subunit; trimethylamine N-oxide (TMAO) reductase I, catalytic subunit 1059256..1061802 Escherichia coli str. K-12 substr. MG1655 946267 b0998 CDS torD NC_000913.3 1061799 1062398 D part of trimethylamine-N-oxide oxidoreductase; TorA-maturation chaperone 1061799..1062398 Escherichia coli str. K-12 substr. MG1655 945625 b0999 CDS cbpM NC_000913.3 1062550 1062855 R modulator of CbpA co-chaperone complement(1062550..1062855) Escherichia coli str. K-12 substr. MG1655 945597 b1000 CDS cbpA NC_000913.3 1062855 1063775 R curved DNA-binding protein; functions closely related to DnaJ; DnaK co-chaperone; curved DNA-binding protein complement(1062855..1063775) Escherichia coli str. K-12 substr. MG1655 947572 b1001 CDS yccE NC_000913.3 1064036 1065292 D uncharacterized protein 1064036..1065292 Escherichia coli str. K-12 substr. MG1655 947468 b1002 CDS agp NC_000913.3 1065585 1066826 D periplasmic glucose-1-phosphatase; glucose-1-phosphatase/inositol phosphatase 1065585..1066826 Escherichia coli str. K-12 substr. MG1655 945773 b1003 CDS yccJ NC_000913.3 1066864 1067091 R uncharacterized protein complement(1066864..1067091) Escherichia coli str. K-12 substr. MG1655 948930 b1004 CDS wrbA NC_000913.3 1067112 1067708 R flavoprotein WrbA (Trp repressor binding protein); NAD(P)H:quinone oxidoreductase complement(1067112..1067708) Escherichia coli str. K-12 substr. MG1655 947263 b4518 CDS ymdF NC_000913.3 1068081 1068254 D KGG family protein 1068081..1068254 Escherichia coli str. K-12 substr. MG1655 945598 b1006 CDS rutG NC_000913.3 1068511 1069839 R putative transport protein; pyrimidine permease complement(1068511..1069839) Escherichia coli str. K-12 substr. MG1655 946589 b1007 CDS rutF NC_000913.3 1069860 1070354 R flavin:NADH reductase complement(1069860..1070354) Escherichia coli str. K-12 substr. MG1655 946594 b1008 CDS rutE NC_000913.3 1070365 1070955 R putative malonic semialdehyde reductase complement(1070365..1070955) Escherichia coli str. K-12 substr. MG1655 946591 b1009 CDS rutD NC_000913.3 1070965 1071765 R putative reactive intermediate detoxifying aminoacrylate hydrolase complement(1070965..1071765) Escherichia coli str. K-12 substr. MG1655 946586 b1010 CDS rutC NC_000913.3 1071773 1072159 R putative aminoacrylate deaminase, reactive intermediate detoxification; weak enamine/imine deaminase activity complement(1071773..1072159) Escherichia coli str. K-12 substr. MG1655 945599 b1011 CDS rutB NC_000913.3 1072171 1072863 R ureidoacrylate amidohydrolase complement(1072171..1072863) Escherichia coli str. K-12 substr. MG1655 945699 b1012 CDS rutA NC_000913.3 1072863 1074011 R pyrimidine oxygenase, FMN-dependent complement(1072863..1074011) Escherichia coli str. K-12 substr. MG1655 945643 b1013 CDS rutR NC_000913.3 1074242 1074880 D hypothetical transcriptional regulator; rut operon transcriptional repressor for 1074242..1074880 Escherichia coli str. K-12 substr. MG1655 945075 b1014 CDS putA NC_000913.3 1074920 1078882 R proline dehydrogenase, P5C dehydrogenase; fused DNA-binding transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase complement(1074920..1078882) Escherichia coli str. K-12 substr. MG1655 945600 b1015 CDS putP NC_000913.3 1079305 1080813 D major sodium/proline symporter; proline:sodium symporter 1079305..1080813 Escherichia coli str. K-12 substr. MG1655 945602 b4490 CDS efeU NC_000913.3 1081356 1082185 D ferrous iron permease (pseudogene); <NA> join(1081356..1081460,1081460..1082185) Escherichia coli str. K-12 substr. MG1655 948956 b1018 CDS efeO NC_000913.3 1082243 1083370 D inactive ferrous ion transporter EfeUOB 1082243..1083370 Escherichia coli str. K-12 substr. MG1655 945603 b1019 CDS efeB NC_000913.3 1083376 1084647 D deferrrochelatase, periplasmic 1083376..1084647 Escherichia coli str. K-12 substr. MG1655 946500 b1020 CDS phoH NC_000913.3 1084992 1086056 D PhoB-dependent, ATP-binding pho regulon component; may be helicase; induced by P starvation; ATP-binding protein; putative PhoH family P-loop ATPase 1084992..1086056 Escherichia coli str. K-12 substr. MG1655 948010 b1021 CDS pgaD NC_000913.3 1086106 1086519 R biofilm PGA synthase PgaCD, regulatory subunit; c-di-GMP-stimulated activity and dimerization complement(1086106..1086519) Escherichia coli str. K-12 substr. MG1655 947503 b1022 CDS pgaC NC_000913.3 1086521 1087846 R biofilm PGA synthase PgaCD, catalytic subunit; poly-beta-1,6-N-acetyl-D-glucosamine synthase complement(1086521..1087846) Escherichia coli str. K-12 substr. MG1655 945606 b1023 CDS pgaB NC_000913.3 1087839 1089857 R poly-beta-1,6-N-acetyl-D-glucosamine (PGA) N-deacetylase outer membrane export lipoprotein complement(1087839..1089857) Escherichia coli str. K-12 substr. MG1655 945604 b1024 CDS pgaA NC_000913.3 1089866 1092289 R putative outer membrane protein; biofilm adhesin polysaccharide PGA secretin; OM porin; poly-beta-1,6-N-acetyl-D-glucosamine export protein complement(1089866..1092289) Escherichia coli str. K-12 substr. MG1655 945596 b1025 CDS ycdT NC_000913.3 1092876 1094234 D diguanylate cyclase, membrane-anchored 1092876..1094234 Escherichia coli str. K-12 substr. MG1655 945593 b1026 CDS insF1 NC_000913.3 1094275 1095141 R IS3 transposase B complement(1094275..1095141) Escherichia coli str. K-12 substr. MG1655 945587 b1027 CDS insE1 NC_000913.3 1095138 1095437 R IS3 transposase A complement(1095138..1095437) Escherichia coli str. K-12 substr. MG1655 945584 b1028 CDS ymdE NC_000913.3 1095505 1095846 D pseudogene; <NA> 1095505..1095846 Escherichia coli str. K-12 substr. MG1655 945589 b1029 CDS ycdU NC_000913.3 1095843 1096829 D putative inner membrane protein 1095843..1096829 Escherichia coli str. K-12 substr. MG1655 945592 b1033 CDS ghrA NC_000913.3 1097886 1098824 D putative dehydrogenase; glyoxylate/hydroxypyruvate reductase A 1097886..1098824 Escherichia coli str. K-12 substr. MG1655 946431 b1034 CDS ycdX NC_000913.3 1098879 1099616 D alkaline phosphatase 1098879..1099616 Escherichia coli str. K-12 substr. MG1655 948477 b1035 CDS ycdY NC_000913.3 1099640 1100194 D putative oxidoreductase component; redox enzyme maturation protein (REMP) chaperone for YcdX 1099640..1100194 Escherichia coli str. K-12 substr. MG1655 945609 b1036 CDS ycdZ NC_000913.3 1100296 1100787 D DUF1097 family inner membrane protein 1100296..1100787 Escherichia coli str. K-12 substr. MG1655 945617 b1037 CDS csgG NC_000913.3 1100851 1101684 R curli production assembly/transport component, 2nd curli operon; curli production assembly/transport outer membrane lipoprotein complement(1100851..1101684) Escherichia coli str. K-12 substr. MG1655 945619 b1038 CDS csgF NC_000913.3 1101711 1102127 R curli production assembly/transport component, 2nd curli operon; curli nucleation outer membrane protein complement(1101711..1102127) Escherichia coli str. K-12 substr. MG1655 945622 b1039 CDS csgE NC_000913.3 1102152 1102541 R curli production assembly/transport component, 2nd curli operon; curlin secretion specificity factor complement(1102152..1102541) Escherichia coli str. K-12 substr. MG1655 945711 b1040 CDS csgD NC_000913.3 1102546 1103196 R putative 2-component transcriptional regulator for 2nd curli operon; csgBAC operon transcriptional regulator complement(1102546..1103196) Escherichia coli str. K-12 substr. MG1655 949119 b1041 CDS csgB NC_000913.3 1103951 1104406 D minor curlin subunit precursor, similar ro CsgA; curlin nucleator protein, minor subunit in curli complex 1103951..1104406 Escherichia coli str. K-12 substr. MG1655 947391 b1042 CDS csgA NC_000913.3 1104447 1104902 D curlin major subunit, coiled surface structures; cryptic; curlin subunit, amyloid curli fibers, cryptic 1104447..1104902 Escherichia coli str. K-12 substr. MG1655 949055 b1043 CDS csgC NC_000913.3 1104961 1105293 D putative curli production protein; curli assembly protein 1104961..1105293 Escherichia coli str. K-12 substr. MG1655 945623 b1044 CDS ymdA NC_000913.3 1105414 1105725 D uncharacterized protein 1105414..1105725 Escherichia coli str. K-12 substr. MG1655 949012 b1045 CDS ymdB NC_000913.3 1105820 1106353 D putative polyprotein; O-acetyl-ADP-ribose deacetylase; RNase III inhibitor during cold shock; putative cardiolipin synthase C regulatory subunit 1105820..1106353 Escherichia coli str. K-12 substr. MG1655 946987 b1046 CDS clsC NC_000913.3 1106355 1107776 D putative synthase; stationary phase cardiolipin synthase 3 1106355..1107776 Escherichia coli str. K-12 substr. MG1655 947321 b1047 CDS opgC NC_000913.3 1107784 1108941 R OPG biosynthetic transmembrane succinyltransferase complement(1107784..1108941) Escherichia coli str. K-12 substr. MG1655 946944 b1048 CDS opgG NC_000913.3 1109335 1110870 D periplasmic glucans biosynthesis protein; OPG biosynthetic periplasmic beta-1,6 branching glycosyltransferase 1109335..1110870 Escherichia coli str. K-12 substr. MG1655 945005 b1049 CDS opgH NC_000913.3 1110863 1113406 D membrane glycosyltransferase; synthesis of membrane-derived oligosaccharide (MDO); OPG biosynthetic ACP-dependent transmembrane UDP-glucose beta-1,2 glycosyltransferase; nutrient-dependent cell size regulator, FtsZ assembly antagonist 1110863..1113406 Escherichia coli str. K-12 substr. MG1655 945624 b1050 CDS yceK NC_000913.3 1113579 1113806 D outer membrane integrity lipoprotein 1113579..1113806 Escherichia coli str. K-12 substr. MG1655 945613 b1051 CDS msyB NC_000913.3 1113807 1114181 R acidic protein suppresses mutants lacking function of protein export; multicopy suppressor of secY and secA complement(1113807..1114181) Escherichia coli str. K-12 substr. MG1655 945612 b1053 CDS mdtG NC_000913.3 1114264 1115490 R putative transport protein; putative drug efflux system protein complement(1114264..1115490) Escherichia coli str. K-12 substr. MG1655 945627 b1054 CDS lpxL NC_000913.3 1115662 1116582 R heat shock protein; lauryl-acyl carrier protein (ACP)-dependent acyltransferase complement(1115662..1116582) Escherichia coli str. K-12 substr. MG1655 946216 b1055 CDS yceA NC_000913.3 1116807 1117859 D putative rhodanese-related sulfurtransferase 1116807..1117859 Escherichia coli str. K-12 substr. MG1655 945601 b1056 CDS yceI NC_000913.3 1117901 1118476 R periplasmic high pH-inducible lipid-binding protein complement(1117901..1118476) Escherichia coli str. K-12 substr. MG1655 946145 b1057 CDS yceJ NC_000913.3 1118480 1119046 R putative cytochrome b561 complement(1118480..1119046) Escherichia coli str. K-12 substr. MG1655 945628 b1058 CDS yceO NC_000913.3 1119307 1119447 R uncharacterized protein complement(1119307..1119447) Escherichia coli str. K-12 substr. MG1655 945629 b1059 CDS solA NC_000913.3 1119468 1120586 R sarcosine oxidase-like protein; N-methyltryptophan oxidase, FAD-binding complement(1119468..1120586) Escherichia coli str. K-12 substr. MG1655 944983 b1060 CDS bssS NC_000913.3 1120701 1120955 R biofilm regulator complement(1120701..1120955) Escherichia coli str. K-12 substr. MG1655 946104 b1061 CDS dinI NC_000913.3 1121242 1121487 R damage-inducible protein I; DNA damage-inducible protein I complement(1121242..1121487) Escherichia coli str. K-12 substr. MG1655 945022 b1062 CDS pyrC NC_000913.3 1121561 1122607 R dihydro-orotase complement(1121561..1122607) Escherichia coli str. K-12 substr. MG1655 945787 b1063 CDS yceB NC_000913.3 1122713 1123273 R lipoprotein, DUF1439 family complement(1122713..1123273) Escherichia coli str. K-12 substr. MG1655 947377 b1064 CDS grxB NC_000913.3 1123407 1124054 R glutaredoxin 2; glutaredoxin 2 (Grx2) complement(1123407..1124054) Escherichia coli str. K-12 substr. MG1655 946926 b1065 CDS mdtH NC_000913.3 1124118 1125326 R multidrug resistance efflux transporter conferring overexpression resistance to norfloxacin and enoxacin complement(1124118..1125326) Escherichia coli str. K-12 substr. MG1655 946920 b1066 CDS rimJ NC_000913.3 1125562 1126146 D acetylation of N-terminal alanine of 30S ribosomal subunit protein S5; ribosomal-protein-S5-alanine N-acetyltransferase 1125562..1126146 Escherichia coli str. K-12 substr. MG1655 946910 b1067 CDS yceH NC_000913.3 1126157 1126804 D UPF0502 family protein 1126157..1126804 Escherichia coli str. K-12 substr. MG1655 945633 b1068 CDS yceM NC_000913.3 1126806 1127729 D putative virulence factor; putative oxidoreductase 1126806..1127729 Escherichia coli str. K-12 substr. MG1655 945204 b1069 CDS murJ NC_000913.3 1127839 1129374 D putative virulence factor; putative lipid II flippase 1127839..1129374 Escherichia coli str. K-12 substr. MG1655 945487 b1070 CDS flgN NC_000913.3 1129414 1129830 R protein of flagellar biosynthesis; export chaperone for FlgK and FlgL complement(1129414..1129830) Escherichia coli str. K-12 substr. MG1655 945634 b1071 CDS flgM NC_000913.3 1129835 1130128 R anti-FliA (anti-sigma) factor; also known as RflB protein; anti-sigma factor for FliA (sigma 28) complement(1129835..1130128) Escherichia coli str. K-12 substr. MG1655 946684 b1072 CDS flgA NC_000913.3 1130204 1130863 R flagellar biosynthesis; assembly of basal-body periplasmic P ring; assembly protein for flagellar basal-body periplasmic P ring complement(1130204..1130863) Escherichia coli str. K-12 substr. MG1655 946300 b1073 CDS flgB NC_000913.3 1131018 1131434 D flagellar biosynthesis, cell-proximal portion of basal-body rod; flagellar component of cell-proximal portion of basal-body rod 1131018..1131434 Escherichia coli str. K-12 substr. MG1655 945678 b1074 CDS flgC NC_000913.3 1131438 1131842 D flagellar biosynthesis, cell-proximal portion of basal-body rod; flagellar component of cell-proximal portion of basal-body rod 1131438..1131842 Escherichia coli str. K-12 substr. MG1655 946687 b1075 CDS flgD NC_000913.3 1131854 1132549 D flagellar biosynthesis, initiation of hook assembly; flagellar hook assembly protein 1131854..1132549 Escherichia coli str. K-12 substr. MG1655 945813 b1076 CDS flgE NC_000913.3 1132574 1133782 D flagellar biosynthesis, hook protein; flagellar hook protein 1132574..1133782 Escherichia coli str. K-12 substr. MG1655 945636 b1077 CDS flgF NC_000913.3 1133802 1134557 D flagellar biosynthesis, cell-proximal portion of basal-body rod; flagellar component of cell-proximal portion of basal-body rod 1133802..1134557 Escherichia coli str. K-12 substr. MG1655 945639 b1078 CDS flgG NC_000913.3 1134729 1135511 D flagellar biosynthesis, cell-distal portion of basal-body rod; flagellar component of cell-distal portion of basal-body rod 1134729..1135511 Escherichia coli str. K-12 substr. MG1655 945647 b1079 CDS flgH NC_000913.3 1135564 1136262 D flagellar biosynthesis, basal-body outer-membrane L (lipopolysaccharide layer) ring protein; flagellar protein of basal-body outer-membrane L ring 1135564..1136262 Escherichia coli str. K-12 substr. MG1655 946996 b1080 CDS flgI NC_000913.3 1136274 1137371 D homolog of Salmonella P-ring of flagella basal body; putative flagellar basal body protein 1136274..1137371 Escherichia coli str. K-12 substr. MG1655 947534 b1081 CDS flgJ NC_000913.3 1137371 1138312 D flagellar biosynthesis; flagellar rod assembly protein and murein hydrolase; flagellum-specific muramidase 1137371..1138312 Escherichia coli str. K-12 substr. MG1655 947456 b1082 CDS flgK NC_000913.3 1138378 1140021 D flagellar biosynthesis, hook-filament junction protein 1; flagellar hook-filament junction protein 1 1138378..1140021 Escherichia coli str. K-12 substr. MG1655 945648 b1083 CDS flgL NC_000913.3 1140033 1140986 D flagellar biosynthesis; hook-filament junction protein; flagellar hook-filament junction protein 1140033..1140986 Escherichia coli str. K-12 substr. MG1655 945646 b1084 CDS rne NC_000913.3 1141182 1144367 R RNase E, membrane attachment, mRNA turnover, maturation 5S RNA; endoribonuclease; RNA-binding protein;RNA degradosome binding protein complement(1141182..1144367) Escherichia coli str. K-12 substr. MG1655 945641 b1085 CDS yceQ NC_000913.3 1144502 1144822 D uncharacterized protein 1144502..1144822 Escherichia coli str. K-12 substr. MG1655 945640 b1086 CDS rluC NC_000913.3 1144940 1145899 D 23S rRNA pseudouridine(955,2504,2580) synthase 1144940..1145899 Escherichia coli str. K-12 substr. MG1655 945637 b1087 CDS yceF NC_000913.3 1146011 1146595 R m(7)GTP pyrophosphatase complement(1146011..1146595) Escherichia coli str. K-12 substr. MG1655 945631 b1088 CDS yceD NC_000913.3 1146794 1147315 D DUF177 family protein 1146794..1147315 Escherichia coli str. K-12 substr. MG1655 945650 b1089 CDS rpmF NC_000913.3 1147367 1147540 D 50S ribosomal subunit protein L32 1147367..1147540 Escherichia coli str. K-12 substr. MG1655 945657 b1090 CDS plsX NC_000913.3 1147621 1148691 D glycerolphosphate auxotrophy in plsB background; putative phosphate acyltransferase 1147621..1148691 Escherichia coli str. K-12 substr. MG1655 946165 b1091 CDS fabH NC_000913.3 1148759 1149712 D 3-oxoacyl-[acyl-carrier-protein] synthase III; acetylCoA ACP transacylase; 3-oxoacyl-[acyl-carrier-protein] synthase III 1148759..1149712 Escherichia coli str. K-12 substr. MG1655 946003 b1092 CDS fabD NC_000913.3 1149728 1150657 D malonyl-CoA-[acyl-carrier-protein] transacylase 1149728..1150657 Escherichia coli str. K-12 substr. MG1655 945766 b1093 CDS fabG NC_000913.3 1150670 1151404 D 3-oxoacyl-[acyl-carrier-protein] reductase 1150670..1151404 Escherichia coli str. K-12 substr. MG1655 945645 b1094 CDS acpP NC_000913.3 1151615 1151851 D acyl carrier protein; acyl carrier protein (ACP) 1151615..1151851 Escherichia coli str. K-12 substr. MG1655 944805 b1095 CDS fabF NC_000913.3 1151939 1153180 D 3-oxoacyl-[acyl-carrier-protein] synthase II 1151939..1153180 Escherichia coli str. K-12 substr. MG1655 946665 b1096 CDS pabC NC_000913.3 1153300 1154109 D 4-amino-4-deoxychorismate lyase; 4-amino-4-deoxychorismate lyase component of para-aminobenzoate synthase multienzyme complex 1153300..1154109 Escherichia coli str. K-12 substr. MG1655 946647 b1097 CDS yceG NC_000913.3 1154112 1155134 D putative thymidylate kinase; septation protein, ampicillin sensitivity 1154112..1155134 Escherichia coli str. K-12 substr. MG1655 945660 b1098 CDS tmk NC_000913.3 1155124 1155765 D thymidylate kinase 1155124..1155765 Escherichia coli str. K-12 substr. MG1655 945663 b1099 CDS holB NC_000913.3 1155762 1156766 D DNA polymerase III, delta prime subunit 1155762..1156766 Escherichia coli str. K-12 substr. MG1655 945661 b1100 CDS ycfH NC_000913.3 1156777 1157574 D putative DNase 1156777..1157574 Escherichia coli str. K-12 substr. MG1655 945656 b1101 CDS ptsG NC_000913.3 1157869 1159302 D PTS system, glucose-specific IIBC component; fused glucose-specific PTS enzymes: IIB component/IIC component 1157869..1159302 Escherichia coli str. K-12 substr. MG1655 945651 b1102 CDS fhuE NC_000913.3 1159362 1161551 R outer membrane receptor for ferric iron uptake; ferric-rhodotorulic acid outer membrane transporter complement(1159362..1161551) Escherichia coli str. K-12 substr. MG1655 945649 b1103 CDS hinT NC_000913.3 1161885 1162244 D purine nucleoside phosphoramidase, dadA activator protein 1161885..1162244 Escherichia coli str. K-12 substr. MG1655 948549 b1104 CDS ycfL NC_000913.3 1162247 1162624 D uncharacterized protein 1162247..1162624 Escherichia coli str. K-12 substr. MG1655 948539 b1105 CDS lpoB NC_000913.3 1162638 1163279 D OM lipoprotein stimulator of MrcB transpeptidase 1162638..1163279 Escherichia coli str. K-12 substr. MG1655 948536 b1106 CDS thiK NC_000913.3 1163260 1164084 D putative beta-glucosidase; thiamine kinase 1163260..1164084 Escherichia coli str. K-12 substr. MG1655 948525 b1107 CDS nagZ NC_000913.3 1164095 1165120 D beta N-acetyl-glucosaminidase 1164095..1165120 Escherichia coli str. K-12 substr. MG1655 945671 b1108 CDS ycfP NC_000913.3 1165143 1165685 D putative UPF0227 family esterase 1165143..1165685 Escherichia coli str. K-12 substr. MG1655 945676 b1109 CDS ndh NC_000913.3 1166085 1167389 D respiratory NADH dehydrogenase; respiratory NADH dehydrogenase 2/cupric reductase 1166085..1167389 Escherichia coli str. K-12 substr. MG1655 946792 b1110 CDS ycfJ NC_000913.3 1167599 1168138 D uncharacterized protein 1167599..1168138 Escherichia coli str. K-12 substr. MG1655 945977 b1111 CDS ycfQ NC_000913.3 1168200 1168832 R repressor for bhsA(ycfR) complement(1168200..1168832) Escherichia coli str. K-12 substr. MG1655 947425 b1112 CDS bhsA NC_000913.3 1169073 1169330 D biofilm, cell surface and signaling protein 1169073..1169330 Escherichia coli str. K-12 substr. MG1655 945492 b1113 CDS ldtC NC_000913.3 1169412 1170374 R L,D-transpeptidase linking Lpp to murein complement(1169412..1170374) Escherichia coli str. K-12 substr. MG1655 945666 b1114 CDS mfd NC_000913.3 1170518 1173964 R transcription-repair coupling factor; mutation frequency decline; transcription-repair coupling factor complement(1170518..1173964) Escherichia coli str. K-12 substr. MG1655 945681 b1115 CDS ycfT NC_000913.3 1174092 1175165 R inner membrane protein complement(1174092..1175165) Escherichia coli str. K-12 substr. MG1655 945679 b1116 CDS lolC NC_000913.3 1175427 1176626 D membrane component of ABC superfamily; lipoprotein-releasing system transmembrane protein 1175427..1176626 Escherichia coli str. K-12 substr. MG1655 945673 b1117 CDS lolD NC_000913.3 1176619 1177320 D putative ATP-binding component of a transport system; outer membrane-specific lipoprotein transporter subunit 1176619..1177320 Escherichia coli str. K-12 substr. MG1655 945670 b1118 CDS lolE NC_000913.3 1177320 1178564 D putative kinase; membrane component of ABC superfamily; lipoprotein-releasing system transmembrane protein 1177320..1178564 Escherichia coli str. K-12 substr. MG1655 945665 b1119 CDS nagK NC_000913.3 1178593 1179504 D N-acetyl-D-glucosamine kinase 1178593..1179504 Escherichia coli str. K-12 substr. MG1655 945664 b1120 CDS cobB NC_000913.3 1179631 1180359 D putative nicotinic acid mononucleotide:5,6-dimethylbenzimidazole (DMB) phosphoribosyltransferase; deacetylase of acs and cheY, chemotaxis regulator 1179631..1180359 Escherichia coli str. K-12 substr. MG1655 945687 b1121 CDS ycfZ NC_000913.3 1180479 1181267 R inner membrane protein complement(1180479..1181267) Escherichia coli str. K-12 substr. MG1655 945685 b1122 CDS ymfA NC_000913.3 1181264 1181725 R DUF3592 family inner membrane protein complement(1181264..1181725) Escherichia coli str. K-12 substr. MG1655 945684 b1123 CDS potD NC_000913.3 1181783 1182829 R spermidine/putrescine periplasmic transport protein; periplasmic-binding component of ABC superfamily; spermidine/putrescine ABC transporter periplasmic binding protein complement(1181783..1182829) Escherichia coli str. K-12 substr. MG1655 945682 b1124 CDS potC NC_000913.3 1182826 1183620 R spermidine/putrescine transport system permease; membrane component of ABC superfamily; spermidine/putrescine ABC transporter permease complement(1182826..1183620) Escherichia coli str. K-12 substr. MG1655 945691 b1125 CDS potB NC_000913.3 1183617 1184444 R spermidine/putrescine transport system permease; membrane component of ABC superfamily; spermidine/putrescine ABC transporter permease complement(1183617..1184444) Escherichia coli str. K-12 substr. MG1655 945692 b1126 CDS potA NC_000913.3 1184458 1185594 R ATP-binding component of spermidine/putrescine transport; spermidine/putrescine ABC transporter ATPase complement(1184458..1185594) Escherichia coli str. K-12 substr. MG1655 946323 b1127 CDS pepT NC_000913.3 1185844 1187070 D putative peptidase T; peptidase T 1185844..1187070 Escherichia coli str. K-12 substr. MG1655 946333 b1128 CDS roxA NC_000913.3 1187119 1188240 R 50S ribosomal protein L16 arginine hydroxylase; 2-oxoglutarate oxygenase complement(1187119..1188240) Escherichia coli str. K-12 substr. MG1655 945391 b1129 CDS phoQ NC_000913.3 1188316 1189776 R sensor protein PhoQ; sensory histidine kinase in two-component regulatory system with PhoP complement(1188316..1189776) Escherichia coli str. K-12 substr. MG1655 946326 b1130 CDS phoP NC_000913.3 1189776 1190447 R transcriptional regulatory protein; response regulator in two-component regulatory system with PhoQ complement(1189776..1190447) Escherichia coli str. K-12 substr. MG1655 945697 b1131 CDS purB NC_000913.3 1190616 1191986 R adenylosuccinate lyase complement(1190616..1191986) Escherichia coli str. K-12 substr. MG1655 945695 b1132 CDS hflD NC_000913.3 1191990 1192631 R putative lysogenization regulator complement(1191990..1192631) Escherichia coli str. K-12 substr. MG1655 945693 b1133 CDS mnmA NC_000913.3 1192667 1193773 R tRNA(Gln,Lys,Glu) U34 2-thiouridylase complement(1192667..1193773) Escherichia coli str. K-12 substr. MG1655 945690 b1134 CDS nudJ NC_000913.3 1193827 1194288 R bifunctional thiamine pyrimidine pyrophosphate hydrolase and thiamine pyrophosphate hydrolase complement(1193827..1194288) Escherichia coli str. K-12 substr. MG1655 945689 b1135 CDS rluE NC_000913.3 1194298 1194951 R 23S rRNA pseudouridine(2457) synthase complement(1194298..1194951) Escherichia coli str. K-12 substr. MG1655 945701 b1136 CDS icd NC_000913.3 1195123 1196373 D isocitrate dehydrogenase, specific for NADP+; isocitrate dehydrogenase; e14 prophage attachment site; tellurite reductase 1195123..1196373 Escherichia coli str. K-12 substr. MG1655 945702 b1137 CDS ymfD NC_000913.3 1196867 1197532 R e14 prophage; putative SAM-dependent methyltransferase complement(1196867..1197532) Escherichia coli str. K-12 substr. MG1655 945329 b1138 CDS ymfE NC_000913.3 1197533 1198237 R e14 prophage; putative inner membrane protein complement(1197533..1198237) Escherichia coli str. K-12 substr. MG1655 946722 b1139 CDS lit NC_000913.3 1198695 1199588 D phage T4 late gene expression; at locus of e14 element; T4 phage exclusion protein; cell death peptidase, e14 prophage 1198695..1199588 Escherichia coli str. K-12 substr. MG1655 948421 b1140 CDS intE NC_000913.3 1199679 1200806 R prophage e14 integrase; e14 prophage; putative integrase complement(1199679..1200806) Escherichia coli str. K-12 substr. MG1655 948034 b1141 CDS xisE NC_000913.3 1200787 1201032 R e14 prophage; putative excisionase complement(1200787..1201032) Escherichia coli str. K-12 substr. MG1655 945705 b1143 CDS ymfI NC_000913.3 1201497 1201838 D e14 prophage; uncharacterized protein 1201497..1201838 Escherichia coli str. K-12 substr. MG1655 945712 b1144 CDS ymfJ NC_000913.3 1201776 1202084 R e14 prophage; uncharacterized protein complement(1201776..1202084) Escherichia coli str. K-12 substr. MG1655 945718 b1145 CDS cohE NC_000913.3 1202259 1202933 R e14 prophage; repressor protein phage e14 complement(1202259..1202933) Escherichia coli str. K-12 substr. MG1655 945719 b1146 CDS croE NC_000913.3 1203024 1203224 D e14 prophage; putative DNA-binding transcriptional regulator 1203024..1203224 Escherichia coli str. K-12 substr. MG1655 945720 b1147 CDS ymfL NC_000913.3 1203268 1203825 D e14 prophage; putative DNA-binding transcriptional regulator 1203268..1203825 Escherichia coli str. K-12 substr. MG1655 945717 b1148 CDS ymfM NC_000913.3 1203822 1204160 D e14 prophage; uncharacterized protein 1203822..1204160 Escherichia coli str. K-12 substr. MG1655 945715 b4692 CDS oweE NC_000913.3 1204170 1204403 D pseudogene, lambda replication protein O homolog; CPS-53/KpLE1 prophage;Phage or Prophage Related; <NA> 1204170..1204403 Escherichia coli str. K-12 substr. MG1655 7751644 b4693 CDS aaaE NC_000913.3 1204404 1205537 D pseudogene, phage terminase protein A family, e14 prophage;Phage or Prophage Related; <NA> 1204404..1205537 Escherichia coli str. K-12 substr. MG1655 7751645 b1150 CDS ymfR NC_000913.3 1205549 1205731 D e14 prophage; uncharacterized protein 1205549..1205731 Escherichia coli str. K-12 substr. MG1655 945700 b1151 CDS beeE NC_000913.3 1205731 1206142 D pseudogene, portal protein family, e14 prophage;Phage or Prophage Related; <NA> 1205731..1206142 Escherichia coli str. K-12 substr. MG1655 945698 b1152 CDS jayE NC_000913.3 1206143 1206922 D pseudogene, e14 prophage;Phage or Prophage Related; <NA> 1206143..1206922 Escherichia coli str. K-12 substr. MG1655 945703 b1153 CDS ymfQ NC_000913.3 1206913 1207497 D prohage e14 tail protein homolog 1206913..1207497 Escherichia coli str. K-12 substr. MG1655 945707 b1154 CDS stfP NC_000913.3 1207501 1208130 D e14 prophage; uncharacterized protein 1207501..1208130 Escherichia coli str. K-12 substr. MG1655 945726 b1155 CDS tfaP NC_000913.3 1208132 1208545 D e14 prophage; uncharacterized protein 1208132..1208545 Escherichia coli str. K-12 substr. MG1655 945724 b1156 CDS tfaE NC_000913.3 1208517 1209119 R e14 prophage; putative tail fiber assembly protein complement(1208517..1209119) Escherichia coli str. K-12 substr. MG1655 945723 b1157 CDS stfE NC_000913.3 1209119 1209619 R pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related; <NA> complement(1209119..1209619) Escherichia coli str. K-12 substr. MG1655 945722 b1158 CDS pinE NC_000913.3 1209685 1210239 D inversion of adjacent DNA; at locus of e14 element; e14 prophage; site-specific DNA recombinase 1209685..1210239 Escherichia coli str. K-12 substr. MG1655 945721 b1159 CDS mcrA NC_000913.3 1210346 1211179 D restriction of DNA at 5-methylcytosine residues; at locus of e14 element; putative 5-methylcytosine/5-hydroxymethylcytosine-specific restriction nuclease; 5-methylcytosine DNA binding protein 1210346..1211179 Escherichia coli str. K-12 substr. MG1655 945727 b4519 CDS icdC NC_000913.3 1211413 1211577 D pseudogene, isocitrate dehydrogenase C-terminal gene fragment; idcC' is a 54 codon 3' gene fragment created during e14 prophage insertion; <NA> 1211413..1211577 Escherichia coli str. K-12 substr. MG1655 4056026 b1160 CDS iraM NC_000913.3 1211680 1212003 R RpoS stabilzer during Mg starvation, anti-RssB factor complement(1211680..1212003) Escherichia coli str. K-12 substr. MG1655 945729 b1161 CDS ycgX NC_000913.3 1212703 1213107 R DUF1398 family protein complement(1212703..1213107) Escherichia coli str. K-12 substr. MG1655 945733 b1162 CDS bluR NC_000913.3 1213328 1214059 R putative transcriptional regulator; repressor of blue light-responsive genes complement(1213328..1214059) Escherichia coli str. K-12 substr. MG1655 945735 b1163 CDS bluF NC_000913.3 1214264 1215475 R anti-repressor for YcgE, blue light-responsive; FAD-binding; inactive c-di-GMP phosphodiesterase-like EAL domain protein complement(1214264..1215475) Escherichia coli str. K-12 substr. MG1655 947592 b1164 CDS ycgZ NC_000913.3 1215789 1216025 D RcsB connector protein for regulation of biofilm and acid-resistance 1215789..1216025 Escherichia coli str. K-12 substr. MG1655 945885 b1165 CDS ymgA NC_000913.3 1216068 1216340 D RcsB connector protein for regulation of biofilm 1216068..1216340 Escherichia coli str. K-12 substr. MG1655 948991 b1166 CDS ariR NC_000913.3 1216369 1216635 D RcsB connector protein for regulation of biofilm and acid-resistance 1216369..1216635 Escherichia coli str. K-12 substr. MG1655 945340 b1167 CDS ymgC NC_000913.3 1216748 1216996 D Blue light, low temperature and stress induced protein 1216748..1216996 Escherichia coli str. K-12 substr. MG1655 945090 b1168 CDS ycgG NC_000913.3 1217328 1218851 D putative proteases; putative membrane-anchored cyclic-di-GMP phosphodiesterase 1217328..1218851 Escherichia coli str. K-12 substr. MG1655 945738 b4520 CDS ymgF NC_000913.3 1218983 1219201 D inner membrane division septum protein 1218983..1219201 Escherichia coli str. K-12 substr. MG1655 1450253 b4491 CDS ycgH NC_000913.3 1219601 1222248 D pseudogene; putative ATP-binding component of a transport system; <NA> join(1219601..1222174,1222174..1222248) Escherichia coli str. K-12 substr. MG1655 2847703 b1171 CDS ymgD NC_000913.3 1222305 1222634 R uncharacterized protein complement(1222305..1222634) Escherichia coli str. K-12 substr. MG1655 945732 b1172 CDS ymgG NC_000913.3 1222644 1222988 R UPF0757 family protein complement(1222644..1222988) Escherichia coli str. K-12 substr. MG1655 945728 b4593 CDS ymgI NC_000913.3 1222990 1223163 R uncharacterized protein complement(1222990..1223163) Escherichia coli str. K-12 substr. MG1655 5061515 b4594 CDS ymgJ NC_000913.3 1223264 1223449 D uncharacterized protein 1223264..1223449 Escherichia coli str. K-12 substr. MG1655 5061516 b4521 CDS ycgI NC_000913.3 1223564 1223907 D pseudogene; <NA> join(1223564..1223671,1223671..1223907) Escherichia coli str. K-12 substr. MG1655 1450255 b1174 CDS minE NC_000913.3 1224279 1224545 R cell division topological specificity factor, reverses MinC inhibition of ftsZ ring formation; cell division topological specificity factor complement(1224279..1224545) Escherichia coli str. K-12 substr. MG1655 945740 b1175 CDS minD NC_000913.3 1224549 1225361 R cell division inhibitor, a membrane ATPase, activates minC; inhibitor of FtsZ ring polymerization; chromosome-membrane tethering protein; membrane ATPase of the MinCDEE system complement(1224549..1225361) Escherichia coli str. K-12 substr. MG1655 945741 b1176 CDS minC NC_000913.3 1225385 1226080 R cell division inhibitor, inhibits ftsZ ring formation; inhibitor of FtsZ ring polymerization complement(1225385..1226080) Escherichia coli str. K-12 substr. MG1655 945744 b1177 CDS ycgJ NC_000913.3 1226600 1226968 D uncharacterized protein 1226600..1226968 Escherichia coli str. K-12 substr. MG1655 946155 b1178 CDS pliG NC_000913.3 1227071 1227472 R periplasmic inhibitor of g-type lysozyme complement(1227071..1227472) Escherichia coli str. K-12 substr. MG1655 946963 b1179 CDS ycgL NC_000913.3 1227714 1228007 D UPF0745 family protein 1227714..1228007 Escherichia coli str. K-12 substr. MG1655 946226 b1180 CDS ycgM NC_000913.3 1228079 1228738 D putative isomerase; putative isomerase/hydrolase 1228079..1228738 Escherichia coli str. K-12 substr. MG1655 946115 b1181 CDS ycgN NC_000913.3 1228815 1229276 D UPF0153 family cysteine cluster protein 1228815..1229276 Escherichia coli str. K-12 substr. MG1655 945804 b1182 CDS hlyE NC_000913.3 1229483 1230394 R hemolysin E complement(1229483..1230394) Escherichia coli str. K-12 substr. MG1655 945745 b1183 CDS umuD NC_000913.3 1230767 1231186 D SOS mutagenesis; error-prone repair; processed to UmuD'; forms complex with UmuC; translesion error-prone DNA polymerase V subunit; RecA-activated auto-protease 1230767..1231186 Escherichia coli str. K-12 substr. MG1655 945746 b1184 CDS umuC NC_000913.3 1231186 1232454 D SOS mutagenesis and repair; translesion error-prone DNA polymerase V subunit; DNA polymerase activity 1231186..1232454 Escherichia coli str. K-12 substr. MG1655 946359 b1185 CDS dsbB NC_000913.3 1232500 1233030 R reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella.; oxidoreductase that catalyzes reoxidation of DsbA protein disulfide isomerase I complement(1232500..1233030) Escherichia coli str. K-12 substr. MG1655 946344 b1186 CDS nhaB NC_000913.3 1233176 1234717 R Na+/H+ antiporter, pH independent; sodium:proton antiporter complement(1233176..1234717) Escherichia coli str. K-12 substr. MG1655 944822 b1187 CDS fadR NC_000913.3 1234938 1235657 D negative regulator for fad regulon, and positive activator of fabA; fatty acid metabolism regulon transcriptional regulator 1234938..1235657 Escherichia coli str. K-12 substr. MG1655 948652 b1188 CDS ycgB NC_000913.3 1235709 1237241 R SpoVR family stationary phase protein complement(1235709..1237241) Escherichia coli str. K-12 substr. MG1655 946365 b1189 CDS dadA NC_000913.3 1237571 1238869 D D-amino acid dehydrogenase subunit; D-amino acid dehydrogenase 1237571..1238869 Escherichia coli str. K-12 substr. MG1655 945752 b1190 CDS dadX NC_000913.3 1238879 1239949 D alanine racemase 2, catabolic; alanine racemase, catabolic, PLP-binding 1238879..1239949 Escherichia coli str. K-12 substr. MG1655 945754 b1191 CDS cvrA NC_000913.3 1240335 1242071 R putative cation/proton antiporter complement(1240335..1242071) Escherichia coli str. K-12 substr. MG1655 945755 b1192 CDS ldcA NC_000913.3 1242166 1243080 R murein tetrapeptide carboxypeptidase; LD-carboxypeptidase A complement(1242166..1243080) Escherichia coli str. K-12 substr. MG1655 945756 b1193 CDS emtA NC_000913.3 1243180 1243791 D murein transglycosylase E; lytic murein endotransglycosylase E 1243180..1243791 Escherichia coli str. K-12 substr. MG1655 945655 b1194 CDS ycgR NC_000913.3 1243793 1244527 R flagellar velocity braking protein, c-di-GMP-regulated complement(1243793..1244527) Escherichia coli str. K-12 substr. MG1655 947609 b1195 CDS ymgE NC_000913.3 1244728 1244982 D transglycosylase asociated protein; UPF0410 family putative inner membrane protein 1244728..1244982 Escherichia coli str. K-12 substr. MG1655 945760 b1196 CDS ycgY NC_000913.3 1245160 1245600 D uncharacterized protein 1245160..1245600 Escherichia coli str. K-12 substr. MG1655 945761 b1197 CDS treA NC_000913.3 1245679 1247376 R trehalase, periplasmic; periplasmic trehalase complement(1245679..1247376) Escherichia coli str. K-12 substr. MG1655 945757 b1198 CDS dhaM NC_000913.3 1247696 1249114 R PTS hybrid protein; putative dihydroxyacetone-specific PTS enzymes: HPr, EI components complement(1247696..1249114) Escherichia coli str. K-12 substr. MG1655 945749 b1199 CDS dhaL NC_000913.3 1249125 1249757 R dihydroxyacetone kinase, C-terminal domain complement(1249125..1249757) Escherichia coli str. K-12 substr. MG1655 945748 b1200 CDS dhaK NC_000913.3 1249768 1250838 R dihydroxyacetone kinase, PTS-dependent, dihydroxyacetone-binding subunit complement(1249768..1250838) Escherichia coli str. K-12 substr. MG1655 945747 b1201 CDS dhaR NC_000913.3 1251066 1252985 D dhaKLM operon transcription activator 1251066..1252985 Escherichia coli str. K-12 substr. MG1655 945743 b1202 CDS ycgV NC_000913.3 1253085 1255952 R putative adhesion and penetration protein; putative adhesin complement(1253085..1255952) Escherichia coli str. K-12 substr. MG1655 945767 b1203 CDS ychF NC_000913.3 1256721 1257812 R putative GTP-binding protein; catalase inhibitor protein; ATPase, K+-dependent, ribosome-associated complement(1256721..1257812) Escherichia coli str. K-12 substr. MG1655 945769 b1204 CDS pth NC_000913.3 1257929 1258513 R peptidyl-tRNA hydrolase complement(1257929..1258513) Escherichia coli str. K-12 substr. MG1655 945765 b1205 CDS ychH NC_000913.3 1258791 1259069 D DUF2583 family putative inner membrane protein 1258791..1259069 Escherichia coli str. K-12 substr. MG1655 945762 b1206 CDS dauA NC_000913.3 1259124 1260803 R putative sulfate transporter; C4-dicarboxylic acid transporter complement(1259124..1260803) Escherichia coli str. K-12 substr. MG1655 945770 b1207 CDS prs NC_000913.3 1260928 1261875 R phosphoribosylpyrophosphate synthetase; phosphoribosylpyrophosphate synthase complement(1260928..1261875) Escherichia coli str. K-12 substr. MG1655 945772 b1208 CDS ispE NC_000913.3 1262026 1262877 R 4-diphosphocytidyl-2-C-methylerythritol kinase complement(1262026..1262877) Escherichia coli str. K-12 substr. MG1655 945774 b1209 CDS lolB NC_000913.3 1262877 1263500 R outer-membrane lipoprotein; lipoprotein localization factor complement(1262877..1263500) Escherichia coli str. K-12 substr. MG1655 945775 b1210 CDS hemA NC_000913.3 1263714 1264970 D glutamyl-tRNA reductase; glutamyl tRNA reductase 1263714..1264970 Escherichia coli str. K-12 substr. MG1655 945777 b1211 CDS prfA NC_000913.3 1265012 1266094 D peptide chain release factor RF-1 1265012..1266094 Escherichia coli str. K-12 substr. MG1655 949002 b1212 CDS prmC NC_000913.3 1266094 1266927 D possible protoporphyrinogen oxidase; RF-1 and RF-2 N5-glutamine methyltransferase 1266094..1266927 Escherichia coli str. K-12 substr. MG1655 945779 b1213 CDS ychQ NC_000913.3 1266924 1267316 D SIRB family inner membrane protein 1266924..1267316 Escherichia coli str. K-12 substr. MG1655 945781 b1214 CDS ychA NC_000913.3 1267320 1268129 D transglutaminase-like TPR-repeat protein 1267320..1268129 Escherichia coli str. K-12 substr. MG1655 945784 b1215 CDS kdsA NC_000913.3 1268165 1269019 D 2-dehydro-3-deoxyphosphooctulonate aldolase; 3-deoxy-D-manno-octulosonate 8-phosphate synthase 1268165..1269019 Escherichia coli str. K-12 substr. MG1655 945785 b4419 CDS ldrA NC_000913.3 1269168 1269275 R small toxic polypeptide; toxic polypeptide, small complement(1269168..1269275) Escherichia coli str. K-12 substr. MG1655 2847733 b4421 CDS ldrB NC_000913.3 1269703 1269810 R small toxic polypeptide; toxic polypeptide, small complement(1269703..1269810) Escherichia coli str. K-12 substr. MG1655 2847735 b4423 CDS ldrC NC_000913.3 1270238 1270345 R small toxic polypeptide; toxic polypeptide, small complement(1270238..1270345) Escherichia coli str. K-12 substr. MG1655 2847775 b1216 CDS chaA NC_000913.3 1270749 1271849 R sodium-calcium/proton antiporter; calcium/sodium:proton antiporter complement(1270749..1271849) Escherichia coli str. K-12 substr. MG1655 945790 b1217 CDS chaB NC_000913.3 1272119 1272349 D cation transport regulator 1272119..1272349 Escherichia coli str. K-12 substr. MG1655 945792 b1218 CDS chaC NC_000913.3 1272507 1273202 D cation transport regulator 1272507..1273202 Escherichia coli str. K-12 substr. MG1655 945793 b1219 CDS ychN NC_000913.3 1273246 1273599 R putative sulfur relay protein complement(1273246..1273599) Escherichia coli str. K-12 substr. MG1655 945794 b1220 CDS ychO NC_000913.3 1273784 1275178 D conserved protein, invasin-like; putative invasin 1273784..1275178 Escherichia coli str. K-12 substr. MG1655 945801 b1221 CDS narL NC_000913.3 1275179 1275829 R pleiotrophic regulation of anaerobic respiration: response regulator for nar, frd, dms and tor genes; response regulator in two-component regulatory system with NarX complement(1275179..1275829) Escherichia coli str. K-12 substr. MG1655 945795 b1222 CDS narX NC_000913.3 1275822 1277618 R nitrate/nitrate sensor, histidine protein kinase acts on NarL regulator; sensory histidine kinase in two-component regulatory system with NarL complement(1275822..1277618) Escherichia coli str. K-12 substr. MG1655 945788 b1223 CDS narK NC_000913.3 1277957 1279348 D nitrite extrusion protein; nitrate/nitrite transporter 1277957..1279348 Escherichia coli str. K-12 substr. MG1655 945783 b1224 CDS narG NC_000913.3 1279864 1283607 D nitrate reductase 1, alpha subunit 1279864..1283607 Escherichia coli str. K-12 substr. MG1655 945782 b1225 CDS narH NC_000913.3 1283604 1285142 D nitrate reductase 1, beta subunit; nitrate reductase 1, beta (Fe-S) subunit 1283604..1285142 Escherichia coli str. K-12 substr. MG1655 945780 b1226 CDS narJ NC_000913.3 1285139 1285849 D nitrate reductase 1, delta subunit, assembly function; molybdenum-cofactor-assembly chaperone delta subunit of nitrate reductase 1 1285139..1285849 Escherichia coli str. K-12 substr. MG1655 945807 b1227 CDS narI NC_000913.3 1285849 1286526 D nitrate reductase 1, cytochrome b(NR), gamma subunit; nitrate reductase 1, gamma (cytochrome b(NR)) subunit 1285849..1286526 Escherichia coli str. K-12 substr. MG1655 945808 b1229 CDS tpr NC_000913.3 1287087 1287176 R a protamine-like protein; protamine-like protein complement(1287087..1287176) Escherichia coli str. K-12 substr. MG1655 946224 b1232 CDS purU NC_000913.3 1287782 1288624 R formyltetrahydrofolate deformylase; for purT-dependent FGAR synthesis; formyltetrahydrofolate hydrolase complement(1287782..1288624) Escherichia coli str. K-12 substr. MG1655 945827 b1233 CDS ychJ NC_000913.3 1288674 1289132 R UPF0225 family protein complement(1288674..1289132) Escherichia coli str. K-12 substr. MG1655 945828 b1234 CDS rssA NC_000913.3 1289245 1290150 D putative patatin-like family phospholipase 1289245..1290150 Escherichia coli str. K-12 substr. MG1655 945725 b1235 CDS rssB NC_000913.3 1290242 1291255 D Hnr protein; PcnB-degradosome interaction factor; response regulator 1290242..1291255 Escherichia coli str. K-12 substr. MG1655 945855 b1236 CDS galU NC_000913.3 1291457 1292365 D glucose-1-phosphate uridylyltransferase 1291457..1292365 Escherichia coli str. K-12 substr. MG1655 945730 b1237 CDS hns NC_000913.3 1292509 1292922 R DNA-binding protein HLP-II (HU, BH2, HD, NS); pleiotropic regulator; global DNA-binding transcriptional dual regulator H-NS complement(1292509..1292922) Escherichia coli str. K-12 substr. MG1655 945829 b1238 CDS tdk NC_000913.3 1293527 1294144 D thymidine kinase; thymidine kinase/deoxyuridine kinase 1293527..1294144 Escherichia coli str. K-12 substr. MG1655 945834 b4573 CDS insZ NC_000913.3 1294426 1295322 R pseudogene, transposase homolog; <NA> complement(join(1294426..1294992,1294992..1295141,1295140..1295322)) Escherichia coli str. K-12 substr. MG1655 4056037 b1241 CDS adhE NC_000913.3 1295446 1298121 R CoA-linked acetaldehyde dehydrogenase and iron-dependent alcohol dehydrogenase; pyruvate-formate-lyase deactivase; fused acetaldehyde-CoA dehydrogenase/iron-dependent alcohol dehydrogenase/pyruvate-formate lyase deactivase complement(1295446..1298121) Escherichia coli str. K-12 substr. MG1655 945837 b1242 CDS ychE NC_000913.3 1298598 1299245 D putative channel protein; UPF0056 family inner membrane protein 1298598..1299245 Escherichia coli str. K-12 substr. MG1655 945836 b1243 CDS oppA NC_000913.3 1301182 1302813 D oligopeptide transport; periplasmic binding protein; periplasmic-binding component of ABC superfamily; oligopeptide ABC transporter periplasmic binding protein 1301182..1302813 Escherichia coli str. K-12 substr. MG1655 945830 b1244 CDS oppB NC_000913.3 1302899 1303819 D oligopeptide transport permease protein; membrane component of ABC superfamily; oligopeptide ABC transporter permease 1302899..1303819 Escherichia coli str. K-12 substr. MG1655 945823 b1245 CDS oppC NC_000913.3 1303834 1304742 D homolog of Salmonella oligopeptide transport permease protein; membrane component of ABC superfamily; oligopeptide ABC transporter permease 1303834..1304742 Escherichia coli str. K-12 substr. MG1655 945810 b1246 CDS oppD NC_000913.3 1304754 1305767 D homolog of Salmonella ATP-binding protein of oligopeptide ABC transport system; oligopeptide ABC transporter ATPase 1304754..1305767 Escherichia coli str. K-12 substr. MG1655 945802 b1247 CDS oppF NC_000913.3 1305764 1306768 D homolog of Salmonella ATP-binding protein of oligopeptide ABC transport system; oligopeptide ABC transporter ATPase 1305764..1306768 Escherichia coli str. K-12 substr. MG1655 945818 b1248 CDS yciU NC_000913.3 1306821 1307150 R UPF0263 family protein complement(1306821..1307150) Escherichia coli str. K-12 substr. MG1655 945819 b1249 CDS clsA NC_000913.3 1307185 1308645 R cardiolipin synthase, a major membrane phospholipid; novobiocin sensitivity; cardiolipin synthase 1 complement(1307185..1308645) Escherichia coli str. K-12 substr. MG1655 945821 b4595 CDS yciY NC_000913.3 1308788 1308961 D uncharacterized protein 1308788..1308961 Escherichia coli str. K-12 substr. MG1655 5061502 b1250 CDS kch NC_000913.3 1309016 1310269 R putative potassium channel protein (VIC family); voltage-gated potassium channel complement(1309016..1310269) Escherichia coli str. K-12 substr. MG1655 945841 b1251 CDS yciI NC_000913.3 1310569 1310865 R putative DGPF domain-containing enzyme complement(1310569..1310865) Escherichia coli str. K-12 substr. MG1655 949085 b1252 CDS tonB NC_000913.3 1311089 1311808 D energy transducer; uptake of iron, cyanocobalimin; sensitivity to phages, colicins; membrane spanning protein in TonB-ExbB-ExbD transport complex 1311089..1311808 Escherichia coli str. K-12 substr. MG1655 945843 b1253 CDS yciA NC_000913.3 1311848 1312246 R acyl-CoA esterase complement(1311848..1312246) Escherichia coli str. K-12 substr. MG1655 946634 b1254 CDS yciB NC_000913.3 1312351 1312890 R IspA family inner membrane protein complement(1312351..1312890) Escherichia coli str. K-12 substr. MG1655 946228 b1255 CDS yciC NC_000913.3 1312920 1313663 R UPF0259 family inner membrane protein complement(1312920..1313663) Escherichia coli str. K-12 substr. MG1655 945844 b1256 CDS ompW NC_000913.3 1314020 1314658 D putative outer membrane protein; outer membrane protein W 1314020..1314658 Escherichia coli str. K-12 substr. MG1655 945128 b1257 CDS yciE NC_000913.3 1314718 1315224 R putative rubrerythrin/ferritin-like metal-binding protein complement(1314718..1315224) Escherichia coli str. K-12 substr. MG1655 946871 b1258 CDS yciF NC_000913.3 1315270 1315770 R putative structural proteins; putative rubrerythrin/ferritin-like metal-binding protein complement(1315270..1315770) Escherichia coli str. K-12 substr. MG1655 947133 b1259 CDS yciG NC_000913.3 1315856 1316035 R KGG family protein complement(1315856..1316035) Escherichia coli str. K-12 substr. MG1655 947489 b1260 CDS trpA NC_000913.3 1316416 1317222 R tryptophan synthase, alpha protein; tryptophan synthase, alpha subunit complement(1316416..1317222) Escherichia coli str. K-12 substr. MG1655 946204 b1261 CDS trpB NC_000913.3 1317222 1318415 R tryptophan synthase, beta protein; tryptophan synthase, beta subunit complement(1317222..1318415) Escherichia coli str. K-12 substr. MG1655 945768 b1262 CDS trpC NC_000913.3 1318427 1319788 R N-(5-phosphoribosyl)anthranilate isomerase and indole-3-glycerolphosphate synthetase; indole-3-glycerolphosphate synthetase and N-(5-phosphoribosyl)anthranilate isomerase complement(1318427..1319788) Escherichia coli str. K-12 substr. MG1655 945519 b1263 CDS trpD NC_000913.3 1319789 1321384 R anthranilate synthase component II, glutamine amidotransferase and phosphoribosylanthranilate transferase; fused glutamine amidotransferase (component II) of anthranilate synthase/anthranilate phosphoribosyl transferase complement(1319789..1321384) Escherichia coli str. K-12 substr. MG1655 945109 b1264 CDS trpE NC_000913.3 1321384 1322946 R anthranilate synthase component I; component I of anthranilate synthase complement(1321384..1322946) Escherichia coli str. K-12 substr. MG1655 945846 b1265 CDS trpL NC_000913.3 1323038 1323082 R trp operon leader peptide complement(1323038..1323082) Escherichia coli str. K-12 substr. MG1655 945856 b1266 CDS yciV NC_000913.3 1323220 1324101 D putative enzymes; PHP domain protein 1323220..1324101 Escherichia coli str. K-12 substr. MG1655 945857 b1267 CDS yciO NC_000913.3 1324098 1324718 D putative RNA binding protein 1324098..1324718 Escherichia coli str. K-12 substr. MG1655 945854 b1268 CDS yciQ NC_000913.3 1324746 1326641 D enhancer of membrane protein expression; putative inner membrane protein 1324746..1326641 Escherichia coli str. K-12 substr. MG1655 945850 b1269 CDS rluB NC_000913.3 1326852 1327727 D 23S rRNA pseudouridine(2605) synthase 1326852..1327727 Escherichia coli str. K-12 substr. MG1655 945840 b1270 CDS btuR NC_000913.3 1327767 1328357 R cob(I)alamin adenolsyltransferase; cob(I)yrinic acid a,c-diamide adenosyltransferase complement(1327767..1328357) Escherichia coli str. K-12 substr. MG1655 945839 b1271 CDS yciK NC_000913.3 1328354 1329112 R putative oxidoreductase; putative EmrKY-TolC system oxoacyl-(acyl carrier protein) reductase complement(1328354..1329112) Escherichia coli str. K-12 substr. MG1655 945838 b1272 CDS sohB NC_000913.3 1329332 1330381 D putative protease; inner membrane protein, S49 peptidase family protein 1329332..1330381 Escherichia coli str. K-12 substr. MG1655 945858 b1273 CDS yciN NC_000913.3 1330417 1330668 R DUF2498 protein YciN complement(1330417..1330668) Escherichia coli str. K-12 substr. MG1655 945860 b1274 CDS topA NC_000913.3 1331048 1333645 D DNA topoisomerase type I, omega protein; DNA topoisomerase I, omega subunit 1331048..1333645 Escherichia coli str. K-12 substr. MG1655 945862 b1275 CDS cysB NC_000913.3 1333855 1334829 D positive transcriptional regulator for cysteine regulon; N-acetylserine-responsive cysteine regulon transcriptional activator; autorepressor 1333855..1334829 Escherichia coli str. K-12 substr. MG1655 945771 b4522 CDS ymiA NC_000913.3 1335124 1335288 D uncharacterized protein 1335124..1335288 Escherichia coli str. K-12 substr. MG1655 1450256 b4523 CDS yciX NC_000913.3 1335291 1335458 D uncharacterized protein 1335291..1335458 Escherichia coli str. K-12 substr. MG1655 1450257 b1276 CDS acnA NC_000913.3 1335831 1338506 D aconitate hydrase 1; aconitate hydratase 1; aconitase A 1335831..1338506 Escherichia coli str. K-12 substr. MG1655 946724 b1277 CDS ribA NC_000913.3 1338570 1339160 R GTP cyclohydrolase II complement(1338570..1339160) Escherichia coli str. K-12 substr. MG1655 945763 b1278 CDS pgpB NC_000913.3 1339330 1340094 D non-essential phosphatidylglycerophosphate phosphatase, membrane bound; phosphatidylglycerophosphatase B 1339330..1340094 Escherichia coli str. K-12 substr. MG1655 945863 b1279 CDS yciS NC_000913.3 1340243 1340551 D DUF1049 family inner membrane protein, function unknown 1340243..1340551 Escherichia coli str. K-12 substr. MG1655 944936 b1280 CDS yciM NC_000913.3 1340558 1341727 D putative heat shock protein; LPS regulatory protein; putative modulator of LpxC proteolysis 1340558..1341727 Escherichia coli str. K-12 substr. MG1655 944858 b1281 CDS pyrF NC_000913.3 1341921 1342658 D orotidine-5'-phosphate decarboxylase 1341921..1342658 Escherichia coli str. K-12 substr. MG1655 947121 b1282 CDS yciH NC_000913.3 1342658 1342984 D initiation factor function partial mimic, SUI1 family 1342658..1342984 Escherichia coli str. K-12 substr. MG1655 947058 b1283 CDS osmB NC_000913.3 1343110 1343328 R osmotically inducible lipoprotein; osmotically and stress inducible lipoprotein complement(1343110..1343328) Escherichia coli str. K-12 substr. MG1655 945866 b1284 CDS yciT NC_000913.3 1343597 1344346 R putative DEOR-type transcriptional regulator; global regulator of transcription; DeoR family complement(1343597..1344346) Escherichia coli str. K-12 substr. MG1655 945869 b4596 CDS yciZ NC_000913.3 1344436 1344609 R uncharacterized protein complement(1344436..1344609) Escherichia coli str. K-12 substr. MG1655 5061509 b1285 CDS gmr NC_000913.3 1344757 1346742 R cyclic-di-GMP phosphodiesterase; csgD regulator; modulator of RNase II stability complement(1344757..1346742) Escherichia coli str. K-12 substr. MG1655 945868 b4672 CDS ymiB NC_000913.3 1346796 1346900 D uncharacterized protein 1346796..1346900 Escherichia coli str. K-12 substr. MG1655 7751616 b1286 CDS rnb NC_000913.3 1346978 1348912 R RNase II, mRNA degradation; ribonuclease II complement(1346978..1348912) Escherichia coli str. K-12 substr. MG1655 945864 b1287 CDS yciW NC_000913.3 1348980 1350107 R putative oxidoreductase complement(1348980..1350107) Escherichia coli str. K-12 substr. MG1655 945859 b1288 CDS fabI NC_000913.3 1350251 1351039 R enoyl-[acyl-carrier-protein] reductase (NADH); enoyl-[acyl-carrier-protein] reductase, NADH-dependent complement(1350251..1351039) Escherichia coli str. K-12 substr. MG1655 945870 b1289 CDS ycjD NC_000913.3 1351407 1351760 R DUF559 family endonuclease-related protein complement(1351407..1351760) Escherichia coli str. K-12 substr. MG1655 945871 b1290 CDS sapF NC_000913.3 1351828 1352634 R putative ATP-binding protein of peptide transport system; antimicrobial peptide ABC transporter ATPase complement(1351828..1352634) Escherichia coli str. K-12 substr. MG1655 945335 b1291 CDS sapD NC_000913.3 1352636 1353628 R putative ATP-binding protein of peptide transport system; antimicrobial peptide ABC transporter ATPase complement(1352636..1353628) Escherichia coli str. K-12 substr. MG1655 946203 b1292 CDS sapC NC_000913.3 1353628 1354518 R homolog of Salmonella peptide transport permease protein; membrane component of ABC superfamily; antimicrobial peptide transport ABC transporter permease complement(1353628..1354518) Escherichia coli str. K-12 substr. MG1655 945266 b1293 CDS sapB NC_000913.3 1354505 1355470 R homolog of Salmonella peptide transport permease protein; membrane component of ABC superfamily; antimicrobial peptide transport ABC transporter permease complement(1354505..1355470) Escherichia coli str. K-12 substr. MG1655 946191 b1294 CDS sapA NC_000913.3 1355467 1357110 R homolog of Salmonella peptide transport periplasmic protein; periplasmic-binding component of ABC superfamily; antimicrobial peptide transport ABC transporter periplasmic binding protein complement(1355467..1357110) Escherichia coli str. K-12 substr. MG1655 945873 b1295 CDS ymjA NC_000913.3 1357423 1357668 R DUF2543 family protein complement(1357423..1357668) Escherichia coli str. K-12 substr. MG1655 945874 b1296 CDS puuP NC_000913.3 1357802 1359187 R putative amino acid/amine transport protein; putrescine importer complement(1357802..1359187) Escherichia coli str. K-12 substr. MG1655 946287 b1297 CDS puuA NC_000913.3 1359490 1360908 R putative glutamine synthetase; glutamate--putrescine ligase complement(1359490..1360908) Escherichia coli str. K-12 substr. MG1655 946202 b1298 CDS puuD NC_000913.3 1361120 1361884 D probable amidotransferase subunit; gamma-glutamyl-gamma-aminobutyrate hydrolase 1361120..1361884 Escherichia coli str. K-12 substr. MG1655 945882 b1299 CDS puuR NC_000913.3 1361911 1362468 D repressor for the divergent puu operons, putrescine inducible 1361911..1362468 Escherichia coli str. K-12 substr. MG1655 945886 b1300 CDS puuC NC_000913.3 1362743 1364230 D aldehyde dehydrogenase, prefers NADP over NAD; gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; succinate semialdehyde dehydrogenase 1362743..1364230 Escherichia coli str. K-12 substr. MG1655 947003 b1301 CDS puuB NC_000913.3 1364232 1365512 D probable oxidoreductase; gamma-glutamylputrescine oxidoreductase 1364232..1365512 Escherichia coli str. K-12 substr. MG1655 945072 b1302 CDS puuE NC_000913.3 1365550 1366815 D 4-aminobutyrate aminotransferase; 4-aminobutyrate aminotransferase, PLP-dependent 1365550..1366815 Escherichia coli str. K-12 substr. MG1655 945446 b1303 CDS pspF NC_000913.3 1366935 1367912 R psp operon transcriptional activator complement(1366935..1367912) Escherichia coli str. K-12 substr. MG1655 945683 b1304 CDS pspA NC_000913.3 1368079 1368747 D phage shock protein, inner membrane protein; regulatory protein for phage-shock-protein operon 1368079..1368747 Escherichia coli str. K-12 substr. MG1655 945887 b1305 CDS pspB NC_000913.3 1368801 1369025 D phage shock protein; psp operon transcription co-activator 1368801..1369025 Escherichia coli str. K-12 substr. MG1655 945893 b1306 CDS pspC NC_000913.3 1369025 1369384 D phage shock protein: activates phage shock-protein expression; psp operon transcription co-activator 1369025..1369384 Escherichia coli str. K-12 substr. MG1655 945499 b1307 CDS pspD NC_000913.3 1369393 1369614 D phage shock protein; peripheral inner membrane phage-shock protein 1369393..1369614 Escherichia coli str. K-12 substr. MG1655 945635 b1308 CDS pspE NC_000913.3 1369689 1370003 D phage shock protein; thiosulfate:cyanide sulfurtransferase (rhodanese) 1369689..1370003 Escherichia coli str. K-12 substr. MG1655 945652 b1309 CDS ycjM NC_000913.3 1370216 1371895 D putative polysaccharide hydrolase; alpha amylase catalytic domain family protein 1370216..1371895 Escherichia coli str. K-12 substr. MG1655 945659 b1310 CDS ycjN NC_000913.3 1371909 1373201 D putative ABC sugar transporter periplasmic binding protein 1371909..1373201 Escherichia coli str. K-12 substr. MG1655 945696 b1311 CDS ycjO NC_000913.3 1373222 1374103 D putative binding-protein dependent transport protein; putative sugar ABC transporter permease 1373222..1374103 Escherichia coli str. K-12 substr. MG1655 945888 b1312 CDS ycjP NC_000913.3 1374090 1374932 D putative transport system permease protein; putative sugar ABC transporter permease 1374090..1374932 Escherichia coli str. K-12 substr. MG1655 945892 b1313 CDS ycjQ NC_000913.3 1374963 1376015 D putative oxidoreductase; putative Zn-dependent NAD(P)-binding oxidoreductase 1374963..1376015 Escherichia coli str. K-12 substr. MG1655 945971 b1314 CDS ycjR NC_000913.3 1376034 1376822 D putative TIM alpha/beta barrel enzyme 1376034..1376822 Escherichia coli str. K-12 substr. MG1655 947427 b1315 CDS ycjS NC_000913.3 1376832 1377887 D putative dehydrogenase; putative NADH-binding oxidoreductase 1376832..1377887 Escherichia coli str. K-12 substr. MG1655 948589 b1316 CDS ycjT NC_000913.3 1377884 1380151 D putative family 65 glycosyl hydrolase 1377884..1380151 Escherichia coli str. K-12 substr. MG1655 945895 b1317 CDS ycjU NC_000913.3 1380148 1380807 D putative beta-phosphoglucomutase; beta-phosphoglucomutase 1380148..1380807 Escherichia coli str. K-12 substr. MG1655 945891 b4524 CDS ycjV NC_000913.3 1380821 1381902 D pseudogene; putative ATP-binding component of a transport system; <NA> join(1380821..1381777,1381777..1381902) Escherichia coli str. K-12 substr. MG1655 4306141 b1319 CDS ompG NC_000913.3 1381947 1382852 D outer membrane protein; outer membrane porin G 1381947..1382852 Escherichia coli str. K-12 substr. MG1655 945889 b1320 CDS ycjW NC_000913.3 1382963 1383961 R putative LACI-type transcriptional regulator; LacI family putative transcriptional repressor complement(1382963..1383961) Escherichia coli str. K-12 substr. MG1655 945875 b1321 CDS ycjX NC_000913.3 1384117 1385514 D putative EC 2.1 enzymes; DUF463 family protein, puatative P-loop NTPase 1384117..1385514 Escherichia coli str. K-12 substr. MG1655 945872 b1322 CDS ycjF NC_000913.3 1385511 1386572 D UPF0283 family inner membrane protein 1385511..1386572 Escherichia coli str. K-12 substr. MG1655 945878 b1323 CDS tyrR NC_000913.3 1386720 1388261 D transcriptional regulation of aroF, aroG, tyrA and aromatic amino acid transport; aromatic amino acid biosynthesis and transport regulon transcriptional regulator; autorepressor; ATPase; phosphatase 1386720..1388261 Escherichia coli str. K-12 substr. MG1655 945879 b1324 CDS tpx NC_000913.3 1388305 1388811 R thiol peroxidase; lipid hydroperoxide peroxidase complement(1388305..1388811) Escherichia coli str. K-12 substr. MG1655 945880 b1325 CDS ycjG NC_000913.3 1388930 1389895 D putative muconate cycloisomerase I; L-Ala-D/L-Glu epimerase 1388930..1389895 Escherichia coli str. K-12 substr. MG1655 946013 b1326 CDS mpaA NC_000913.3 1389870 1390598 R putative carboxypeptidase; murein peptide amidase A complement(1389870..1390598) Escherichia coli str. K-12 substr. MG1655 945969 b4525 CDS ymjC NC_000913.3 1390725 1390862 R pseudogene; <NA> complement(1390725..1390862) Escherichia coli str. K-12 substr. MG1655 1450258 b4673 CDS ymjD NC_000913.3 1390868 1390933 R pseudogene fragment, MhpC family; <NA> complement(1390868..1390933) Escherichia coli str. K-12 substr. MG1655 7751617 b1327 CDS ycjY NC_000913.3 1390933 1391853 R S9 homolog non-peptidase family protein complement(1390933..1391853) Escherichia coli str. K-12 substr. MG1655 945988 b1328 CDS pgrR NC_000913.3 1391991 1392890 D putative transcriptional regulator LYSR-type; murein peptide degradation regulator 1391991..1392890 Escherichia coli str. K-12 substr. MG1655 945930 b1329 CDS mppA NC_000913.3 1393227 1394840 D periplasmic-binding component of ABC superfamily; murein tripeptide (L-ala-gamma-D-glutamyl-meso-DAP) transporter subunit 1393227..1394840 Escherichia coli str. K-12 substr. MG1655 945951 b1330 CDS ynaI NC_000913.3 1394891 1395922 R mechanosensitive channel protein, very small conductance complement(1394891..1395922) Escherichia coli str. K-12 substr. MG1655 945898 b1331 CDS insH1 NC_000913.3 1396076 1397092 D IS5 transposase and trans-activator 1396076..1397092 Escherichia coli str. K-12 substr. MG1655 945896 b1332 CDS ynaJ NC_000913.3 1397365 1397622 D DUF2534 family putative inner membrane protein 1397365..1397622 Escherichia coli str. K-12 substr. MG1655 945901 b1333 CDS uspE NC_000913.3 1397672 1398622 R stress-induced protein complement(1397672..1398622) Escherichia coli str. K-12 substr. MG1655 945904 b1334 CDS fnr NC_000913.3 1398774 1399526 R transcriptional regulation of aerobic, anaerobic respiration, osmotic balance; oxygen-sensing anaerobic growth regulon transcriptional regulator FNR; autorepressor complement(1398774..1399526) Escherichia coli str. K-12 substr. MG1655 945908 b1335 CDS ogt NC_000913.3 1399721 1400236 R O-6-alkylguanine-DNA/cysteine-protein methyltransferase; O-6-alkylguanine-DNA:cysteine-protein methyltransferase complement(1399721..1400236) Escherichia coli str. K-12 substr. MG1655 945853 b1336 CDS abgT NC_000913.3 1400247 1401773 R p-aminobenzoyl-glutamate transporter; membrane protein complement(1400247..1401773) Escherichia coli str. K-12 substr. MG1655 945912 b1337 CDS abgB NC_000913.3 1401810 1403255 R p-aminobenzoyl-glutamate hydrolase, B subunit complement(1401810..1403255) Escherichia coli str. K-12 substr. MG1655 945950 b1338 CDS abgA NC_000913.3 1403255 1404565 R p-aminobenzoyl-glutamate hydrolase, A subunit complement(1403255..1404565) Escherichia coli str. K-12 substr. MG1655 945742 b1339 CDS abgR NC_000913.3 1404741 1405649 D putative transcriptional regulator LYSR-type; putative DNA-binding transcriptional regulator of abgABT operon 1404741..1405649 Escherichia coli str. K-12 substr. MG1655 945831 b1340 CDS smrA NC_000913.3 1405979 1406542 D DNA endonuclease 1405979..1406542 Escherichia coli str. K-12 substr. MG1655 945953 b1341 CDS ydaM NC_000913.3 1406563 1407795 R diguanylate cyclase, csgD regulator complement(1406563..1407795) Escherichia coli str. K-12 substr. MG1655 945909 b1342 CDS ydaN NC_000913.3 1408050 1409033 D putative Zn(II) transporter 1408050..1409033 Escherichia coli str. K-12 substr. MG1655 945910 b1343 CDS dbpA NC_000913.3 1409511 1410884 D ATP-dependent RNA helicase; ATP-dependent RNA helicase, specific for 23S rRNA 1409511..1410884 Escherichia coli str. K-12 substr. MG1655 947153 b1344 CDS ttcA NC_000913.3 1411013 1411948 R tRNA s(2)C32 thioltransferase, iron sulfur cluster protein complement(1411013..1411948) Escherichia coli str. K-12 substr. MG1655 948967 b1345 CDS intR NC_000913.3 1412000 1413235 R Rac prophage; integrase complement(1412000..1413235) Escherichia coli str. K-12 substr. MG1655 946976 b1346 CDS ydaQ NC_000913.3 1413237 1413452 R putative lambdoid prophage Rac excisionase; Rac prophage; conserved protein complement(1413237..1413452) Escherichia coli str. K-12 substr. MG1655 947399 b1347 CDS ydaC NC_000913.3 1413531 1413740 R DUF1187 family protein, Rac prophage; putative double-strand break reduction protein complement(1413531..1413740) Escherichia coli str. K-12 substr. MG1655 947504 b1348 CDS ralR NC_000913.3 1413733 1413927 R restriction alleviation and modification enhancement; Rac prophage; restriction alleviation protein complement(1413733..1413927) Escherichia coli str. K-12 substr. MG1655 945914 b1349 CDS recT NC_000913.3 1413984 1414793 R recombinase, DNA renaturation; Rac prophage; recombination and repair protein complement(1413984..1414793) Escherichia coli str. K-12 substr. MG1655 945917 b1350 CDS recE NC_000913.3 1414786 1417386 R exonuclease VIII, ds DNA exonuclease, 5' --> 3' specific; Rac prophage; exonuclease VIII, 5' to 3' specific dsDNA exonuclease complement(1414786..1417386) Escherichia coli str. K-12 substr. MG1655 945918 b1351 CDS racC NC_000913.3 1417488 1417763 R RacC protein; Rac prophage; uncharacterized protein complement(1417488..1417763) Escherichia coli str. K-12 substr. MG1655 945920 b4526 CDS ydaE NC_000913.3 1417838 1418008 R conserved protein, Rac prophage complement(1417838..1418008) Escherichia coli str. K-12 substr. MG1655 948959 b1352 CDS kilR NC_000913.3 1418008 1418229 R Kil protein (killing function) of lambdoid prophage Rac; killing protein, Rac prophage; FtsZ inhibitor protein complement(1418008..1418229) Escherichia coli str. K-12 substr. MG1655 945921 b1353 CDS sieB NC_000913.3 1418671 1419159 D phage superinfection exclusion protein; phage superinfection exclusion protein, Rac prophage 1418671..1419159 Escherichia coli str. K-12 substr. MG1655 945913 b4527 CDS ydaF NC_000913.3 1419156 1419311 R uncharacterized protein, Rac prophage complement(1419156..1419311) Escherichia coli str. K-12 substr. MG1655 945911 b1355 CDS ydaG NC_000913.3 1419322 1419456 R Rac prophage; uncharacterized protein complement(1419322..1419456) Escherichia coli str. K-12 substr. MG1655 945907 b1356 CDS racR NC_000913.3 1419765 1420241 R Rac prophage; putative DNA-binding transcriptional regulator complement(1419765..1420241) Escherichia coli str. K-12 substr. MG1655 945899 b1357 CDS ydaS NC_000913.3 1420365 1420661 D Rac prophage; putative DNA-binding transcriptional regulator 1420365..1420661 Escherichia coli str. K-12 substr. MG1655 945923 b1358 CDS ydaT NC_000913.3 1420684 1421106 D Rac prophage; uncharacterized protein 1420684..1421106 Escherichia coli str. K-12 substr. MG1655 945924 b1359 CDS ydaU NC_000913.3 1421119 1421976 D Rac prophage; conserved protein 1421119..1421976 Escherichia coli str. K-12 substr. MG1655 945925 b1360 CDS ydaV NC_000913.3 1421983 1422729 D putative DNA replication factor; Rac prophage; putative DNA replication protein 1421983..1422729 Escherichia coli str. K-12 substr. MG1655 945926 b1361 CDS ydaW NC_000913.3 1422701 1423200 D Rac prophage; pseudogene, DNA-binding protein family;Phage or Prophage Related; <NA> 1422701..1423200 Escherichia coli str. K-12 substr. MG1655 945927 b1362 CDS rzpR NC_000913.3 1423201 1423644 D pseudogene, Rac prophage; Bacteriophage Rz lysis protein family;Phage or Prophage Related; putative Rac prophage endopeptidase; completely contained in another CDS; <NA> 1423201..1423644 Escherichia coli str. K-12 substr. MG1655 945928 b4528 CDS rzoR NC_000913.3 1423400 1423585 D completely contained in another CDS; Rac prophage; putative lipoprotein 1423400..1423585 Escherichia coli str. K-12 substr. MG1655 1450262 b1363 CDS trkG NC_000913.3 1423782 1425239 D Rac prophage; potassium transporter subunit 1423782..1425239 Escherichia coli str. K-12 substr. MG1655 945932 b1365 CDS ynaK NC_000913.3 1425377 1425640 D Rac prophage; conserved protein 1425377..1425640 Escherichia coli str. K-12 substr. MG1655 947417 b1366 CDS ydaY NC_000913.3 1425630 1426082 D pseudogene, Rac prophage;Phage or Prophage Related; <NA> 1425630..1426082 Escherichia coli str. K-12 substr. MG1655 946208 b1368 CDS tmpR NC_000913.3 1426454 1427386 D Rac prophage; pseudogene, tail protein family;Phage or Prophage Related; putative alpha helix protein; <NA> 1426454..1427386 Escherichia coli str. K-12 substr. MG1655 947543 b4570 CDS lomR NC_000913.3 1427389 1428984 D pseudogene, Rac prophage lom homolog;Phage or Prophage Related; interrupted by IS5 and N-ter deletion; <NA> join(1427389..1427598,1428796..1428984) Escherichia coli str. K-12 substr. MG1655 4056036 b1370 CDS insH1 NC_000913.3 1427746 1428726 R IS5 transposase and trans-activator complement(1427746..1428726) Escherichia coli str. K-12 substr. MG1655 945944 b1372 CDS stfR NC_000913.3 1429049 1432411 D Rac prophage; putative tail fiber protein 1429049..1432411 Escherichia coli str. K-12 substr. MG1655 945207 b1373 CDS tfaR NC_000913.3 1432411 1432986 D tail fiber assembly protein homolog from lambdoid prophage Rac; Rac prophage; putative tail fiber assembly protein 1432411..1432986 Escherichia coli str. K-12 substr. MG1655 946062 b1374 CDS pinR NC_000913.3 1433084 1433674 R Rac prophage; putative site-specific recombinase complement(1433084..1433674) Escherichia coli str. K-12 substr. MG1655 948973 b1375 CDS ynaE NC_000913.3 1433991 1434224 R cold shock protein, Rac prophage complement(1433991..1434224) Escherichia coli str. K-12 substr. MG1655 946078 b4638 CDS ttcC NC_000913.3 1434958 1435008 R pseudogene, prophage Rac integration site ttcA duplication;Phage or Prophage Related; <NA> complement(1434958..1435008) Escherichia coli str. K-12 substr. MG1655 5625564 b1376 CDS uspF NC_000913.3 1435185 1435619 R putative filament protein; stress-induced protein, ATP-binding protein complement(1435185..1435619) Escherichia coli str. K-12 substr. MG1655 945948 b1377 CDS ompN NC_000913.3 1435760 1436893 R outer membrane pore protein N, non-specific complement(1435760..1436893) Escherichia coli str. K-12 substr. MG1655 946313 b1378 CDS pfo NC_000913.3 1437260 1440784 R putative oxidoreductase, Fe-S subunit; pyruvate-flavodoxin oxidoreductase complement(1437260..1440784) Escherichia coli str. K-12 substr. MG1655 946587 b4529 CDS ydbJ NC_000913.3 1441058 1441324 D DUF333 family putative lipoprotein 1441058..1441324 Escherichia coli str. K-12 substr. MG1655 4056027 b1379 CDS hslJ NC_000913.3 1441321 1441743 R heat shock protein hslJ; heat-inducible lipoprotein involved in novobiocin resistance complement(1441321..1441743) Escherichia coli str. K-12 substr. MG1655 946525 b1380 CDS ldhA NC_000913.3 1441854 1442843 R fermentative D-lactate dehydrogenase, NAD-dependent complement(1441854..1442843) Escherichia coli str. K-12 substr. MG1655 946315 b1381 CDS ydbH NC_000913.3 1443051 1445690 D putative membrane-anchored protein, function unknown 1443051..1445690 Escherichia coli str. K-12 substr. MG1655 945949 b1382 CDS ynbE NC_000913.3 1445687 1445872 D lipoprotein 1445687..1445872 Escherichia coli str. K-12 substr. MG1655 945946 b1383 CDS ydbL NC_000913.3 1445880 1446206 D DUF1318 family protein 1445880..1446206 Escherichia coli str. K-12 substr. MG1655 945943 b1384 CDS feaR NC_000913.3 1446378 1447283 R regulatory protein for 2-phenylethylamine catabolism; transcriptional activator for tynA and feaB complement(1446378..1447283) Escherichia coli str. K-12 substr. MG1655 945941 b1385 CDS feaB NC_000913.3 1447519 1449018 D phenylacetaldehyde dehydrogenase 1447519..1449018 Escherichia coli str. K-12 substr. MG1655 945933 b1386 CDS tynA NC_000913.3 1449076 1451349 R copper amine oxidase (tyramine oxidase); tyramine oxidase, copper-requiring complement(1449076..1451349) Escherichia coli str. K-12 substr. MG1655 945939 b1387 CDS paaZ NC_000913.3 1451597 1453642 R oxepin-CoA hydrolase and 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase complement(1451597..1453642) Escherichia coli str. K-12 substr. MG1655 945954 b1388 CDS paaA NC_000913.3 1453927 1454856 D ring 1,2-phenylacetyl-CoA epoxidase subunit 1453927..1454856 Escherichia coli str. K-12 substr. MG1655 945833 b1389 CDS paaB NC_000913.3 1454868 1455155 D putative ring 1,2-phenylacetyl-CoA epoxidase subunit 1454868..1455155 Escherichia coli str. K-12 substr. MG1655 947595 b1390 CDS paaC NC_000913.3 1455164 1455910 D ring 1,2-phenylacetyl-CoA epoxidase subunit 1455164..1455910 Escherichia coli str. K-12 substr. MG1655 945956 b1391 CDS paaD NC_000913.3 1455925 1456422 D ring 1,2-phenylacetyl-CoA epoxidase subunit 1455925..1456422 Escherichia coli str. K-12 substr. MG1655 945959 b1392 CDS paaE NC_000913.3 1456430 1457500 D ring 1,2-phenylacetyl-CoA epoxidase, NAD(P)H oxidoreductase component 1456430..1457500 Escherichia coli str. K-12 substr. MG1655 945962 b1393 CDS paaF NC_000913.3 1457497 1458264 D 2,3-dehydroadipyl-CoA hydratase 1457497..1458264 Escherichia coli str. K-12 substr. MG1655 946011 b1394 CDS paaG NC_000913.3 1458264 1459052 D 1,2-epoxyphenylacetyl-CoA isomerase, oxepin-CoA-forming 1458264..1459052 Escherichia coli str. K-12 substr. MG1655 946263 b1395 CDS paaH NC_000913.3 1459054 1460481 D 3-hydroxyadipyl-CoA dehydrogenase, NAD+-dependent 1459054..1460481 Escherichia coli str. K-12 substr. MG1655 945940 b1396 CDS paaI NC_000913.3 1460471 1460893 D hydroxyphenylacetyl-CoA thioesterase 1460471..1460893 Escherichia coli str. K-12 substr. MG1655 945265 b1397 CDS paaJ NC_000913.3 1460893 1462098 D 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase 1460893..1462098 Escherichia coli str. K-12 substr. MG1655 946121 b1398 CDS paaK NC_000913.3 1462125 1463438 D phenylacetyl-CoA ligase 1462125..1463438 Escherichia coli str. K-12 substr. MG1655 945963 b1399 CDS paaX NC_000913.3 1463539 1464489 D transcriptional repressor of phenylacetic acid degradation paa operon, phenylacetyl-CoA inducer 1463539..1464489 Escherichia coli str. K-12 substr. MG1655 945966 b1400 CDS paaY NC_000913.3 1464471 1465061 D thioesterase required for phenylacetic acid degradation; trimeric; phenylacetate regulatory and detoxification protein; hexapeptide repeat protein 1464471..1465061 Escherichia coli str. K-12 substr. MG1655 945965 b4674 CDS ynbG NC_000913.3 1465165 1465230 R uncharacterized protein complement(1465165..1465230) Escherichia coli str. K-12 substr. MG1655 7751614 b4492 CDS ydbA NC_000913.3 1465392 1474013 D pseudogene, autotransporter homolog; interrupted by IS2 and IS30; <NA> join(1465392..1467904,1469241..1469293,1470517..1474013) Escherichia coli str. K-12 substr. MG1655 2847750 b1402 CDS insD1 NC_000913.3 1467921 1468826 R IS2 transposase TnpB complement(1467921..1468826) Escherichia coli str. K-12 substr. MG1655 945952 b1403 CDS insC1 NC_000913.3 1468784 1469149 R IS2 repressor TnpA complement(1468784..1469149) Escherichia coli str. K-12 substr. MG1655 945967 b1404 CDS insI1 NC_000913.3 1469358 1470509 D IS30 transposase 1469358..1470509 Escherichia coli str. K-12 substr. MG1655 945968 b1406 CDS ydbC NC_000913.3 1474221 1475081 D putative dehydrogenase; putative NAD(P)-binding oxidoreductase 1474221..1475081 Escherichia coli str. K-12 substr. MG1655 945980 b1407 CDS ydbD NC_000913.3 1475144 1477450 D PF10971 family putative periplasmic methylglyoxal resistance protein 1475144..1477450 Escherichia coli str. K-12 substr. MG1655 945983 b1408 CDS ynbA NC_000913.3 1477621 1478226 D inner membrane protein 1477621..1478226 Escherichia coli str. K-12 substr. MG1655 945973 b1409 CDS ynbB NC_000913.3 1478226 1479122 D putative phosphatidate cytidiltransferase; putative CDP-diglyceride synthase 1478226..1479122 Escherichia coli str. K-12 substr. MG1655 945972 b1410 CDS ynbC NC_000913.3 1479138 1480895 D putative esterase 1479138..1480895 Escherichia coli str. K-12 substr. MG1655 945970 b1411 CDS ynbD NC_000913.3 1480909 1482201 D putative enzymes; putative phosphatase inner membrane protein 1480909..1482201 Escherichia coli str. K-12 substr. MG1655 945985 b1412 CDS azoR NC_000913.3 1482255 1482860 R acyl carrier protein phosphodiesterase; NADH-azoreductase, FMN-dependent complement(1482255..1482860) Escherichia coli str. K-12 substr. MG1655 947569 b1413 CDS hrpA NC_000913.3 1483061 1486963 D helicase, ATP-dependent; putative ATP-dependent helicase 1483061..1486963 Escherichia coli str. K-12 substr. MG1655 948444 b1414 CDS ydcF NC_000913.3 1487235 1488035 D DUF218 superfamily protein, SAM-binding 1487235..1488035 Escherichia coli str. K-12 substr. MG1655 946215 b1415 CDS aldA NC_000913.3 1488232 1489671 D aldehyde dehydrogenase, NAD-linked; aldehyde dehydrogenase A, NAD-linked 1488232..1489671 Escherichia coli str. K-12 substr. MG1655 945672 b4493 CDS gapC NC_000913.3 1489713 1490713 R pseudogene, GAP dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase (second fragment); <NA> complement(join(1489713..1489964,1489964..1490713)) Escherichia coli str. K-12 substr. MG1655 2847738 b1418 CDS cybB NC_000913.3 1490902 1491432 D cytochrome b561 1490902..1491432 Escherichia coli str. K-12 substr. MG1655 947241 b1419 CDS ydcA NC_000913.3 1491677 1491850 D putative periplasmic protein 1491677..1491850 Escherichia coli str. K-12 substr. MG1655 945986 b4428 CDS hokB NC_000913.3 1491922 1492071 R small toxic membrane polypeptide; toxic polypeptide, small complement(1491922..1492071) Escherichia coli str. K-12 substr. MG1655 2847727 b1420 CDS mokB NC_000913.3 1491962 1492129 R regulatory peptide whose translation enables hokB expression; regulatory peptide complement(1491962..1492129) Escherichia coli str. K-12 substr. MG1655 948820 b1421 CDS trg NC_000913.3 1492470 1494110 D methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor 1492470..1494110 Escherichia coli str. K-12 substr. MG1655 945995 b1422 CDS ydcI NC_000913.3 1494148 1495071 R putative transcriptional regulator LYSR-type; putative DNA-binding transcriptional regulator complement(1494148..1495071) Escherichia coli str. K-12 substr. MG1655 948865 b1423 CDS ydcJ NC_000913.3 1495288 1496631 D putative metalloenzyme 1495288..1496631 Escherichia coli str. K-12 substr. MG1655 945991 b1424 CDS opgD NC_000913.3 1496856 1498511 D putative glycoprotein; OPG biosynthetic periplasmic protein 1496856..1498511 Escherichia coli str. K-12 substr. MG1655 945994 b1426 CDS ydcH NC_000913.3 1498651 1498875 D DUF465 family protein 1498651..1498875 Escherichia coli str. K-12 substr. MG1655 945997 b1427 CDS rimL NC_000913.3 1498938 1499477 D ribosomal-protein-serine acetyltransferase; ribosomal-protein-L7/L12-serine acetyltransferase 1498938..1499477 Escherichia coli str. K-12 substr. MG1655 945998 b1428 CDS ydcK NC_000913.3 1499469 1500449 R uncharacterized protein complement(1499469..1500449) Escherichia coli str. K-12 substr. MG1655 944932 b1429 CDS tehA NC_000913.3 1500573 1501565 D potassium-tellurite ethidium and proflavin transporter 1500573..1501565 Escherichia coli str. K-12 substr. MG1655 945852 b1430 CDS tehB NC_000913.3 1501562 1502155 D tellurite, selenium methyltransferase, SAM-dependent; tellurite, selenium resistance protein 1501562..1502155 Escherichia coli str. K-12 substr. MG1655 945979 b1431 CDS ydcL NC_000913.3 1502457 1503125 D lipoprotein 1502457..1503125 Escherichia coli str. K-12 substr. MG1655 948203 b4578 CDS insP NC_000913.3 1503218 1503649 R pseudogene, IS609 transposase A;IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related; <NA> complement(1503218..1503649) Escherichia coli str. K-12 substr. MG1655 4056028 b1432 CDS insQ NC_000913.3 1503717 1504865 D IS609 transposase B 1503717..1504865 Escherichia coli str. K-12 substr. MG1655 944942 b1433 CDS ydcO NC_000913.3 1504905 1506080 R putative membrane transport protein; BenE family inner membrane putative transporter complement(1504905..1506080) Escherichia coli str. K-12 substr. MG1655 947247 b1434 CDS ydcN NC_000913.3 1506172 1506708 D putative DNA-binding transcriptional regulator 1506172..1506708 Escherichia coli str. K-12 substr. MG1655 946000 b1435 CDS ydcP NC_000913.3 1506781 1508742 D putative protease; putative peptidase 1506781..1508742 Escherichia coli str. K-12 substr. MG1655 945993 b1436 CDS yncJ NC_000913.3 1508834 1509064 R uncharacterized protein complement(1508834..1509064) Escherichia coli str. K-12 substr. MG1655 945990 b4532 CDS hicA NC_000913.3 1509286 1509462 D mRNA interferase toxin of the HicAB toxin-antitoxin system 1509286..1509462 Escherichia coli str. K-12 substr. MG1655 945989 b1438 CDS hicB NC_000913.3 1509508 1509924 D antitoxin for the HicAB toxin-antitoxin system 1509508..1509924 Escherichia coli str. K-12 substr. MG1655 946001 b1439 CDS ydcR NC_000913.3 1510003 1511409 D multi modular; putative transcriptional regulator; also putative ATP-binding component of a transport system; putative DNA-binding transcriptional regulator and putative aminotransferase 1510003..1511409 Escherichia coli str. K-12 substr. MG1655 946004 b1440 CDS ydcS NC_000913.3 1511654 1512799 D periplasmic-binding component of ABC superfamily; putative ABC transporter periplasmic binding protein 1511654..1512799 Escherichia coli str. K-12 substr. MG1655 946005 b1441 CDS ydcT NC_000913.3 1512817 1513830 D ATP-binding component of ABC superfamily; putative ABC transporter ATPase 1512817..1513830 Escherichia coli str. K-12 substr. MG1655 946007 b1442 CDS ydcU NC_000913.3 1513831 1514772 D membrane component of ABC superfamily; putative ABC transporter permease 1513831..1514772 Escherichia coli str. K-12 substr. MG1655 945976 b1443 CDS ydcV NC_000913.3 1514762 1515556 D membrane component of ABC superfamily; putative ABC transporter permease 1514762..1515556 Escherichia coli str. K-12 substr. MG1655 945903 b1444 CDS patD NC_000913.3 1515578 1517002 D putative aldehyde dehydrogenase; gamma-aminobutyraldehyde dehydrogenase 1515578..1517002 Escherichia coli str. K-12 substr. MG1655 945876 b4598 CDS yncL NC_000913.3 1517099 1517194 R stress-induced small inner membrane enterobacterial protein complement(1517099..1517194) Escherichia coli str. K-12 substr. MG1655 5061503 b1445 CDS ydcX NC_000913.3 1517389 1517562 D DUF2566 family protein 1517389..1517562 Escherichia coli str. K-12 substr. MG1655 945936 b1446 CDS ydcY NC_000913.3 1517648 1517881 D DUF2526 family protein 1517648..1517881 Escherichia coli str. K-12 substr. MG1655 945916 b1447 CDS ydcZ NC_000913.3 1517882 1518331 R DUF606 family inner membrane protein complement(1517882..1518331) Escherichia coli str. K-12 substr. MG1655 946008 b1448 CDS mnaT NC_000913.3 1518328 1518846 R methionine N-acyltransferase; L-amino acid N-acyltransferase complement(1518328..1518846) Escherichia coli str. K-12 substr. MG1655 946010 b1449 CDS curA NC_000913.3 1519027 1520064 D putative oxidoreductase; curcumin/dihydrocurcumin reductase, NADPH-dependent 1519027..1520064 Escherichia coli str. K-12 substr. MG1655 946012 b1450 CDS mcbR NC_000913.3 1520262 1520927 D colanic acid and biofilm gene transcriptional regulator, MqsR-controlled 1520262..1520927 Escherichia coli str. K-12 substr. MG1655 946014 b1451 CDS yncD NC_000913.3 1520963 1523065 R putative iron outer membrane transporter complement(1520963..1523065) Escherichia coli str. K-12 substr. MG1655 946015 b1452 CDS yncE NC_000913.3 1523307 1524368 D putative receptor; ATP-binding protein, periplasmic, function unknown 1523307..1524368 Escherichia coli str. K-12 substr. MG1655 946006 b1453 CDS ansP NC_000913.3 1524481 1525980 R L-asparagine permease; L-asparagine transporter complement(1524481..1525980) Escherichia coli str. K-12 substr. MG1655 946019 b1454 CDS yncG NC_000913.3 1526247 1526864 D glutathione S-transferase homolog 1526247..1526864 Escherichia coli str. K-12 substr. MG1655 946023 b1455 CDS yncH NC_000913.3 1526940 1527152 D IPR020099 family protein 1526940..1527152 Escherichia coli str. K-12 substr. MG1655 946024 b1456 CDS rhsE NC_000913.3 1527902 1529938 D pseudogene, Rhs family; <NA> 1527902..1529938 Escherichia coli str. K-12 substr. MG1655 946026 b1457 CDS ydcD NC_000913.3 1529922 1530404 D putative immunity protein for RhsE 1529922..1530404 Escherichia coli str. K-12 substr. MG1655 946958 b1459 CDS yncI NC_000913.3 1530586 1531639 D pseudogene; <NA> join(1530586..1531323,1531325..1531639) Escherichia coli str. K-12 substr. MG1655 945121 b1460 CDS ydcC NC_000913.3 1531816 1532952 D H repeat-associated protein (ORF-H); H repeat-associated putative transposase 1531816..1532952 Escherichia coli str. K-12 substr. MG1655 947435 b1461 CDS pptA NC_000913.3 1533052 1533285 D 4-oxalocrotonate tautomerase 1533052..1533285 Escherichia coli str. K-12 substr. MG1655 945731 b1462 CDS yddH NC_000913.3 1533282 1533851 R flavin reductase like-protein complement(1533282..1533851) Escherichia coli str. K-12 substr. MG1655 946192 b1463 CDS nhoA NC_000913.3 1534024 1534869 D N-hydroxyarylamine O-acetyltransferase 1534024..1534869 Escherichia coli str. K-12 substr. MG1655 947251 b1464 CDS yddE NC_000913.3 1534965 1535858 R PhzC-PhzF family protein complement(1534965..1535858) Escherichia coli str. K-12 substr. MG1655 944782 b1465 CDS narV NC_000913.3 1535937 1536617 R nitrate reductase 2 (NRZ), gamma subunit complement(1535937..1536617) Escherichia coli str. K-12 substr. MG1655 946029 b1466 CDS narW NC_000913.3 1536614 1537309 R nitrate reductase 2 (NRZ), delta subunit (assembly subunit) complement(1536614..1537309) Escherichia coli str. K-12 substr. MG1655 946032 b1467 CDS narY NC_000913.3 1537309 1538853 R nitrate reductase 2 (NRZ), beta subunit complement(1537309..1538853) Escherichia coli str. K-12 substr. MG1655 946034 b1468 CDS narZ NC_000913.3 1538850 1542590 R nitrate reductase 2 (NRZ), alpha subunit complement(1538850..1542590) Escherichia coli str. K-12 substr. MG1655 945999 b1469 CDS narU NC_000913.3 1542672 1544060 R nitrite extrusion protein 2; nitrate/nitrite transporter complement(1542672..1544060) Escherichia coli str. K-12 substr. MG1655 945799 b1471 CDS yddK NC_000913.3 1544384 1545714 R pseudogene, leucine-rich protein; putative glycoportein; <NA> complement(join(1544384..1544764,1544764..1545714)) Escherichia coli str. K-12 substr. MG1655 947312 b1472 CDS yddL NC_000913.3 1545750 1546028 R putative lipoprotein;putative membrane; Not classified; putative outer membrane porin protein; <NA> complement(1545750..1546028) Escherichia coli str. K-12 substr. MG1655 945737 b1473 CDS yddG NC_000913.3 1546288 1547169 R aromatic amino acid exporter complement(1546288..1547169) Escherichia coli str. K-12 substr. MG1655 945942 b1474 CDS fdnG NC_000913.3 1547401 1550448 D formate dehydrogenase-N, nitrate-inducible, alpha subunit; formate dehydrogenase-N, alpha subunit, nitrate-inducible 1547401..1550448 Escherichia coli str. K-12 substr. MG1655 946035 b1475 CDS fdnH NC_000913.3 1550461 1551345 D formate dehydrogenase-N, nitrate-inducible, iron-sulfur beta subunit; formate dehydrogenase-N, Fe-S (beta) subunit, nitrate-inducible 1550461..1551345 Escherichia coli str. K-12 substr. MG1655 948794 b1476 CDS fdnI NC_000913.3 1551338 1551991 D formate dehydrogenase-N, nitrate-inducible, cytochrome B556(Fdn) gamma subunit; formate dehydrogenase-N, cytochrome B556 (gamma) subunit, nitrate-inducible 1551338..1551991 Escherichia coli str. K-12 substr. MG1655 946038 b1477 CDS yddM NC_000913.3 1552398 1552682 R putative DNA-binding transcriptional regulator complement(1552398..1552682) Escherichia coli str. K-12 substr. MG1655 946040 b1478 CDS adhP NC_000913.3 1552828 1553838 R alcohol dehydrogenase; ethanol-active dehydrogenase/acetaldehyde-active reductase complement(1552828..1553838) Escherichia coli str. K-12 substr. MG1655 946036 b1479 CDS maeA NC_000913.3 1553972 1555669 R NAD-linked malate dehydrogenase (malic enzyme); malate dehydrogenase, decarboxylating, NAD-requiring; malic enzyme complement(1553972..1555669) Escherichia coli str. K-12 substr. MG1655 946031 b1480 CDS sra NC_000913.3 1555826 1555963 R stationary phase-induced ribosome-associated protein; stationary-phase-induced ribosome-associated protein complement(1555826..1555963) Escherichia coli str. K-12 substr. MG1655 946030 b1481 CDS bdm NC_000913.3 1556065 1556280 R biofilm-dependent modulation protein complement(1556065..1556280) Escherichia coli str. K-12 substr. MG1655 946041 b1482 CDS osmC NC_000913.3 1556625 1557056 D osmotically inducible protein; lipoyl-dependent Cys-based peroxidase, hydroperoxide resistance; salt-shock inducible membrane protein; peroxiredoxin 1556625..1557056 Escherichia coli str. K-12 substr. MG1655 946043 b1483 CDS ddpF NC_000913.3 1557112 1558038 R ATP-binding component of ABC superfamily; D,D-dipeptide ABC transporter ATPase complement(1557112..1558038) Escherichia coli str. K-12 substr. MG1655 946020 b1484 CDS ddpD NC_000913.3 1558031 1559017 R ATP-binding component of ABC superfamily; D,D-dipeptide ABC transporter ATPase complement(1558031..1559017) Escherichia coli str. K-12 substr. MG1655 946002 b1485 CDS ddpC NC_000913.3 1559014 1559910 R membrane component of ABC superfamily; D,D-dipeptide ABC transporter permease complement(1559014..1559910) Escherichia coli str. K-12 substr. MG1655 946028 b1486 CDS ddpB NC_000913.3 1559907 1560929 R membrane component of ABC superfamily; D,D-dipeptide ABC transporter permease complement(1559907..1560929) Escherichia coli str. K-12 substr. MG1655 946044 b1487 CDS ddpA NC_000913.3 1560931 1562481 R periplasmic-binding component of ABC superfamily; D,D-dipeptide ABC transporter periplasmic binding protein complement(1560931..1562481) Escherichia coli str. K-12 substr. MG1655 946052 b1488 CDS ddpX NC_000913.3 1562495 1563076 R D-ala-D-ala dipeptidase, Zn-dependent complement(1562495..1563076) Escherichia coli str. K-12 substr. MG1655 945532 b1489 CDS dosP NC_000913.3 1563334 1565733 R oxygen sensor, c-di-GMP phosphodiesterase, heme-regulated; cold- and stationary phase-induced bioflim regulator complement(1563334..1565733) Escherichia coli str. K-12 substr. MG1655 945815 b1490 CDS dosC NC_000913.3 1565758 1567140 R diguanylate cyclase, cold- and stationary phase-induced oxygen-dependent biofilm regulator complement(1565758..1567140) Escherichia coli str. K-12 substr. MG1655 945835 b1491 CDS yddW NC_000913.3 1567504 1568823 R liprotein, glycosyl hydrolase homolog complement(1567504..1568823) Escherichia coli str. K-12 substr. MG1655 945975 b1492 CDS gadC NC_000913.3 1568954 1570489 R acid sensitivity protein, putative transporter; glutamate:gamma-aminobutyric acid antiporter complement(1568954..1570489) Escherichia coli str. K-12 substr. MG1655 946057 b1493 CDS gadB NC_000913.3 1570645 1572045 R glutamate decarboxylase isozyme; glutamate decarboxylase B, PLP-dependent complement(1570645..1572045) Escherichia coli str. K-12 substr. MG1655 946058 b1494 CDS pqqL NC_000913.3 1572407 1575202 R putative zinc protease; putative periplasmic M16 family zinc metalloendopeptidase complement(1572407..1575202) Escherichia coli str. K-12 substr. MG1655 946059 b1495 CDS yddB NC_000913.3 1575247 1577619 R putative TonB-dependent outer membrane receptor complement(1575247..1577619) Escherichia coli str. K-12 substr. MG1655 945961 b1496 CDS yddA NC_000913.3 1577657 1579342 R putative multidrug ABC transporter permease/ATPase complement(1577657..1579342) Escherichia coli str. K-12 substr. MG1655 945945 b1497 CDS ydeM NC_000913.3 1579633 1580790 R putative enzyme; putative YdeN-specific sulfatase-maturating enzyme complement(1579633..1580790) Escherichia coli str. K-12 substr. MG1655 945981 b1498 CDS ydeN NC_000913.3 1580842 1582524 R putative sulfatase; putative Ser-type periplasmic non-aryl sulfatase complement(1580842..1582524) Escherichia coli str. K-12 substr. MG1655 945957 b1499 CDS ydeO NC_000913.3 1582926 1583687 R putative ARAC-type regulatory protein; UV-inducible global regulator, EvgA-, GadE-dependent complement(1582926..1583687) Escherichia coli str. K-12 substr. MG1655 945922 b1500 CDS safA NC_000913.3 1583762 1583959 R two-component system connector membrane protein, EvgSA to PhoQP complement(1583762..1583959) Escherichia coli str. K-12 substr. MG1655 946061 b1501 CDS ydeP NC_000913.3 1584207 1586486 R putative oxidoreductase, major subunit; putative oxidoreductase complement(1584207..1586486) Escherichia coli str. K-12 substr. MG1655 946055 b1502 CDS ydeQ NC_000913.3 1586820 1587734 R putative adhesin; similar to FimH protein; putative fimbrial-like adhesin protein complement(1586820..1587734) Escherichia coli str. K-12 substr. MG1655 946050 b1503 CDS ydeR NC_000913.3 1587793 1588296 R putative fimbrial-like protein; putative fimbrial-like adhesin protein complement(1587793..1588296) Escherichia coli str. K-12 substr. MG1655 946049 b1504 CDS ydeS NC_000913.3 1588309 1588839 R putative fimbrial-like protein; putative fimbrial-like adhesin protein complement(1588309..1588839) Escherichia coli str. K-12 substr. MG1655 946047 b1505 CDS ydeT NC_000913.3 1588853 1590079 R pseudogene; putative outer membrane protein; <NA> complement(1588853..1590079) Escherichia coli str. K-12 substr. MG1655 946042 b1506 CDS yneL NC_000913.3 1590334 1590536 R pseudogene, AraC family; <NA> complement(join(1590334..1590426,1590426..1590536)) Escherichia coli str. K-12 substr. MG1655 946063 b1507 CDS hipA NC_000913.3 1590854 1592176 R persistence to inhibition of murein or DNA biosynthesis, DNA-binding regulator; inactivating GltX kinase facilitating persister formation; toxin of HipAB TA pair; autokinase complement(1590854..1592176) Escherichia coli str. K-12 substr. MG1655 946064 b1508 CDS hipB NC_000913.3 1592176 1592442 R persistence to inhibition of murein or DNA biosynthesis; regulatory protein; antitoxin of HipAB toxin-antitoxin system complement(1592176..1592442) Escherichia coli str. K-12 substr. MG1655 946065 b4696 CDS yneO NC_000913.3 1592665 1597987 R pseudogene, AidA homolog; <NA> complement(join(1592665..1594125,1594127..1597987)) Escherichia coli str. K-12 substr. MG1655 7751623 b1511 CDS lsrK NC_000913.3 1598617 1600209 R autoinducer-2 (AI-2) kinase complement(1598617..1600209) Escherichia coli str. K-12 substr. MG1655 946069 b1512 CDS lsrR NC_000913.3 1600288 1601241 R lsr operon transcriptional repressor complement(1600288..1601241) Escherichia coli str. K-12 substr. MG1655 946070 b1513 CDS lsrA NC_000913.3 1601490 1603025 D autoinducer-2 (AI-2)-transporting ATPase; autoinducer 2 import ATP-binding protein 1601490..1603025 Escherichia coli str. K-12 substr. MG1655 945680 b1514 CDS lsrC NC_000913.3 1603019 1604047 D autoinducer-2 (AI-2)-transporting membrane channel protein; membrane component of ABC superfamily; autoinducer 2 import system permease protein 1603019..1604047 Escherichia coli str. K-12 substr. MG1655 946105 b1515 CDS lsrD NC_000913.3 1604047 1605039 D autoinducer-2 (AI-2)-transporting membrane channel protein; membrane component of ABC superfamily; autoinducer 2 import system permease protein 1604047..1605039 Escherichia coli str. K-12 substr. MG1655 946264 b1516 CDS lsrB NC_000913.3 1605051 1606073 D periplasmic autoinducer-2 (AI-2) binding protein; periplasmic-binding component of ABC superfamily; autoinducer 2-binding protein 1605051..1606073 Escherichia coli str. K-12 substr. MG1655 945418 b1517 CDS lsrF NC_000913.3 1606100 1606975 D putative autoinducer-2 (AI-2) aldolase 1606100..1606975 Escherichia coli str. K-12 substr. MG1655 946071 b1518 CDS lsrG NC_000913.3 1606999 1607289 D autoinducer-2 (AI-2) degrading protein LsrG 1606999..1607289 Escherichia coli str. K-12 substr. MG1655 946073 b1519 CDS tam NC_000913.3 1607346 1608104 D trans-aconitate 2-methyltransferase; trans-aconitate methyltransferase 1607346..1608104 Escherichia coli str. K-12 substr. MG1655 946074 b1520 CDS yneE NC_000913.3 1608108 1609022 R bestrophin family putative inner membrane protein complement(1608108..1609022) Escherichia coli str. K-12 substr. MG1655 946188 b1521 CDS uxaB NC_000913.3 1609229 1610680 R altronate oxidoreductase; altronate oxidoreductase, NAD-dependent complement(1609229..1610680) Escherichia coli str. K-12 substr. MG1655 945542 b1522 CDS yneF NC_000913.3 1610907 1611854 R putative membrane-bound diguanylate cyclase complement(1610907..1611854) Escherichia coli str. K-12 substr. MG1655 947422 b1523 CDS yneG NC_000913.3 1611966 1612325 R DUF4186 family protein complement(1611966..1612325) Escherichia coli str. K-12 substr. MG1655 946171 b1524 CDS glsB NC_000913.3 1612325 1613251 R putative glutaminase; glutaminase 2 complement(1612325..1613251) Escherichia coli str. K-12 substr. MG1655 944973 b1525 CDS sad NC_000913.3 1613315 1614703 R putative aldehyde dehydrogenase; succinate semialdehyde dehydrogenase, NAD(P)+-dependent complement(1613315..1614703) Escherichia coli str. K-12 substr. MG1655 947440 b1526 CDS yneJ NC_000913.3 1614804 1615685 D putative transcriptional regulator LYSR-type; putative DNA-binding transcriptional regulator 1614804..1615685 Escherichia coli str. K-12 substr. MG1655 946079 b1527 CDS yneK NC_000913.3 1615763 1616878 D uncharacterized protein 1615763..1616878 Escherichia coli str. K-12 substr. MG1655 946080 b1528 CDS ydeA NC_000913.3 1617028 1618218 D L-arabinose/isopropyl-beta-D-thiogalactopyranoside export protein (MFS family); arabinose efflux transporter, arabinose-inducible 1617028..1618218 Escherichia coli str. K-12 substr. MG1655 947218 b1529 CDS marC NC_000913.3 1618243 1618908 R UPF0056 family inner membrane protein complement(1618243..1618908) Escherichia coli str. K-12 substr. MG1655 947132 b1530 CDS marR NC_000913.3 1619120 1619554 D multiple antibiotic resistance protein; repressor of mar operon; transcriptional repressor of multiple antibiotic resistance 1619120..1619554 Escherichia coli str. K-12 substr. MG1655 945825 b1531 CDS marA NC_000913.3 1619574 1619957 D multiple antibiotic resistance; transcriptional activator of defense systems; multiple antibiotic resistance transcriptional regulator 1619574..1619957 Escherichia coli str. K-12 substr. MG1655 947613 b1532 CDS marB NC_000913.3 1619989 1620207 D multiple antibiotic resistance protein; periplasmic mar operon regulator 1619989..1620207 Escherichia coli str. K-12 substr. MG1655 946184 b1533 CDS eamA NC_000913.3 1620238 1621137 R amino acid metabolite efflux pump; cysteine and O-acetyl-L-serine efflux system complement(1620238..1621137) Escherichia coli str. K-12 substr. MG1655 946081 b1534 CDS ydeE NC_000913.3 1621332 1622519 D putative transport protein; putative transporter 1621332..1622519 Escherichia coli str. K-12 substr. MG1655 946083 b4599 CDS yneM NC_000913.3 1622646 1622741 D inner membrane-associated protein 1622646..1622741 Escherichia coli str. K-12 substr. MG1655 5061497 b1535 CDS dgcZ NC_000913.3 1622960 1623850 R diguanylate cyclase, zinc-sensing complement(1622960..1623850) Escherichia coli str. K-12 substr. MG1655 946075 b1536 CDS ydeI NC_000913.3 1624105 1624497 R hydrogen peroxide resistance OB fold protein; putative periplasmic protein complement(1624105..1624497) Escherichia coli str. K-12 substr. MG1655 946068 b1537 CDS ydeJ NC_000913.3 1624773 1625291 D inactive PncC family protein 1624773..1625291 Escherichia coli str. K-12 substr. MG1655 946067 b1538 CDS dcp NC_000913.3 1625335 1627380 R dipeptidyl carboxypeptidase II complement(1625335..1627380) Escherichia coli str. K-12 substr. MG1655 946084 b1539 CDS ydfG NC_000913.3 1627517 1628263 D putative oxidoreductase; NADP-dependent 3-hydroxy acid dehydrogenase; malonic semialdehyde reductase 1627517..1628263 Escherichia coli str. K-12 substr. MG1655 946085 b1540 CDS rspR NC_000913.3 1628352 1629038 D transcriptional repressor for rspAB 1628352..1629038 Escherichia coli str. K-12 substr. MG1655 946087 b1541 CDS ydfZ NC_000913.3 1629215 1629418 D selenoprotein, function unknown 1629215..1629418 Escherichia coli str. K-12 substr. MG1655 948796 b1542 CDS ydfI NC_000913.3 1629453 1630913 R putative oxidoreductase; putative NAD-dependent D-mannonate oxidoreductase complement(1629453..1630913) Escherichia coli str. K-12 substr. MG1655 945861 b4600 CDS ydfJ NC_000913.3 1631002 1652838 R pseudogene, MFS transporter family; interrupted by Qin prophage;Phage or Prophage Related; putative transport protein; <NA> complement(join(1631002..1632285,1652755..1652838)) Escherichia coli str. K-12 substr. MG1655 944802 b1544 CDS ydfK NC_000913.3 1633072 1633305 D cold shock protein, function unknown, Qin prophage 1633072..1633305 Escherichia coli str. K-12 substr. MG1655 947451 b1545 CDS pinQ NC_000913.3 1633622 1634212 D Qin prophage; putative site-specific recombinase 1633622..1634212 Escherichia coli str. K-12 substr. MG1655 946088 b1546 CDS tfaQ NC_000913.3 1634310 1634885 R tail fiber assembly protein homolog from lambdoid prophage Qin; Qin prophage; putative tail fibre assembly protein complement(1634310..1634885) Escherichia coli str. K-12 substr. MG1655 946060 b1547 CDS stfQ NC_000913.3 1634885 1635847 R Qin prophage; putative side tail fibre assembly protein complement(1634885..1635847) Escherichia coli str. K-12 substr. MG1655 946098 b1548 CDS nohQ NC_000913.3 1635840 1636367 R pseudogene, Qin prophage; Phage DNA packaging protein Nu1 family;Phage or Prophage Related; DNA packaging protein NU1 homolog from lambdoid prophage Qin; <NA> complement(1635840..1636367) Escherichia coli str. K-12 substr. MG1655 946021 b4533 CDS ynfO NC_000913.3 1636756 1636989 D uncharacterized protein, Qin prophage 1636756..1636989 Escherichia coli str. K-12 substr. MG1655 1450267 b1549 CDS ydfO NC_000913.3 1637047 1637457 D Qin prophage; uncharacterized protein 1637047..1637457 Escherichia coli str. K-12 substr. MG1655 945992 b1550 CDS gnsB NC_000913.3 1637609 1637782 R Qin prophage; multicopy suppressor of secG(Cs) and fabA6(Ts) complement(1637609..1637782) Escherichia coli str. K-12 substr. MG1655 946054 b1551 CDS ynfN NC_000913.3 1637954 1638109 R Qin prophage; cold shock-induced protein complement(1637954..1638109) Escherichia coli str. K-12 substr. MG1655 946097 b1552 CDS cspI NC_000913.3 1638455 1638667 R cold shock-like protein; Qin prophage; cold shock protein complement(1638455..1638667) Escherichia coli str. K-12 substr. MG1655 946099 b1553 CDS rzpQ NC_000913.3 1639030 1639527 R completely contained in another CDS; Rz-like protein, Qin prophage complement(1639030..1639527) Escherichia coli str. K-12 substr. MG1655 946101 b4689 CDS rzoQ NC_000913.3 1639080 1639334 R completely contained in another CDS; putative Rz1-like lipoprotein, Qin prophage complement(1639080..1639334) Escherichia coli str. K-12 substr. MG1655 7751615 b1554 CDS rrrQ NC_000913.3 1639524 1640057 R Qin prophage; putative lysozyme complement(1639524..1640057) Escherichia coli str. K-12 substr. MG1655 946100 b1555 CDS ydfR NC_000913.3 1640054 1640365 R Qin prophage; uncharacterized protein complement(1640054..1640365) Escherichia coli str. K-12 substr. MG1655 946095 b1556 CDS essQ NC_000913.3 1640370 1640585 R Qin prophage; putative S lysis protein complement(1640370..1640585) Escherichia coli str. K-12 substr. MG1655 946093 b1557 CDS cspB NC_000913.3 1641339 1641554 R Qin prophage; cold shock protein complement(1641339..1641554) Escherichia coli str. K-12 substr. MG1655 946091 b1558 CDS cspF NC_000913.3 1641855 1642067 D Qin prophage; cold shock protein 1641855..1642067 Escherichia coli str. K-12 substr. MG1655 946090 b1559 CDS quuQ NC_000913.3 1642489 1643241 R Qin prophage; putative antitermination protein Q complement(1642489..1643241) Escherichia coli str. K-12 substr. MG1655 946103 b1560 CDS ydfU NC_000913.3 1643255 1644304 R Qin prophage; uncharacterized protein complement(1643255..1644304) Escherichia coli str. K-12 substr. MG1655 946108 b1561 CDS rem NC_000913.3 1644651 1644902 R Qin prophage; uncharacterized protein complement(1644651..1644902) Escherichia coli str. K-12 substr. MG1655 946109 b1562 CDS hokD NC_000913.3 1645119 1645274 R polypeptide destructive to membrane potential; hokD (relF) regulatory elements are deleted, and the gene is fused to the relBE transcript; evolutionary relic?; Qin prophage; small toxic polypeptide complement(1645119..1645274) Escherichia coli str. K-12 substr. MG1655 948616 b1563 CDS relE NC_000913.3 1645346 1645633 R Qin prophage; toxin of the RelE-RelB toxin-antitoxin system complement(1645346..1645633) Escherichia coli str. K-12 substr. MG1655 947549 b1564 CDS relB NC_000913.3 1645633 1645872 R negative regulator of translation; antitoxin of the RelE-RelB toxin-antitoxin syste; transcriptional repressor complement(1645633..1645872) Escherichia coli str. K-12 substr. MG1655 948308 b1565 CDS ydfV NC_000913.3 1645897 1646202 D Qin prophage; uncharacterized protein 1645897..1646202 Escherichia coli str. K-12 substr. MG1655 948801 b1566 CDS flxA NC_000913.3 1646405 1646737 D Qin prophage; uncharacterized protein 1646405..1646737 Escherichia coli str. K-12 substr. MG1655 947392 b1567 CDS intK NC_000913.3 1647174 1647356 R pseudogene, integrase fragment, Qin prophage;Phage or Prophage Related; <NA> complement(1647174..1647356) Escherichia coli str. K-12 substr. MG1655 946111 b1568 CDS ydfX NC_000913.3 1647358 1647636 R pseudogene, Qin prophage;Phage or Prophage Related; <NA> complement(1647358..1647636) Escherichia coli str. K-12 substr. MG1655 946112 b1569 CDS dicC NC_000913.3 1647620 1647850 R regulator of dicB; Qin prophage; DNA-binding transcriptional regulator for DicB complement(1647620..1647850) Escherichia coli str. K-12 substr. MG1655 946120 b1570 CDS dicA NC_000913.3 1647934 1648341 D regulator of dicB; Qin prophage; putative regulator for DicB 1647934..1648341 Escherichia coli str. K-12 substr. MG1655 946241 b1571 CDS ydfA NC_000913.3 1648508 1648663 D Qin prophage; uncharacterized protein 1648508..1648663 Escherichia coli str. K-12 substr. MG1655 946082 b1572 CDS ydfB NC_000913.3 1648665 1648793 D Qin prophage; uncharacterized protein 1648665..1648793 Escherichia coli str. K-12 substr. MG1655 946176 b1573 CDS ydfC NC_000913.3 1648823 1649041 D uncharacterized protein, Qin prophage 1648823..1649041 Escherichia coli str. K-12 substr. MG1655 946107 b1575 CDS dicB NC_000913.3 1649609 1649797 D inhibition of cell division; Qin prophage; cell division inhibition protein 1649609..1649797 Escherichia coli str. K-12 substr. MG1655 946110 b1576 CDS ydfD NC_000913.3 1649794 1649985 D Qin prophage; uncharacterized protein 1649794..1649985 Escherichia coli str. K-12 substr. MG1655 946102 b1577 CDS ydfE NC_000913.3 1650078 1650842 D Qin prophage; pseudogene;Phage or Prophage Related; <NA> 1650078..1650842 Escherichia coli str. K-12 substr. MG1655 946113 b1578 CDS insD1 NC_000913.3 1650845 1651537 D IS2 transposase TnpB;IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related; <NA> 1650845..1651537 Escherichia coli str. K-12 substr. MG1655 946118 b1579 CDS intQ NC_000913.3 1651551 1652708 D pseudogene, Qin prophage; phage integrase family;Phage or Prophage Related; <NA> 1651551..1652708 Escherichia coli str. K-12 substr. MG1655 946130 b1580 CDS rspB NC_000913.3 1652896 1653915 R starvation sensing protein; putative Zn-dependent NAD(P)-binding oxidoreductase complement(1652896..1653915) Escherichia coli str. K-12 substr. MG1655 946127 b1581 CDS rspA NC_000913.3 1653927 1655141 R starvation sensing protein; bifunctional D-altronate/D-mannonate dehydratase complement(1653927..1655141) Escherichia coli str. K-12 substr. MG1655 946126 b1582 CDS ynfA NC_000913.3 1655347 1655673 R UPF0060 family inner membrane protein complement(1655347..1655673) Escherichia coli str. K-12 substr. MG1655 946125 b1583 CDS ynfB NC_000913.3 1655808 1656149 D UPF0482 family putative periplasmic protein 1655808..1656149 Escherichia coli str. K-12 substr. MG1655 946119 b1584 CDS speG NC_000913.3 1656184 1656744 D spermidine N(1)-acetyltransferase 1656184..1656744 Escherichia coli str. K-12 substr. MG1655 946117 b1585 CDS ynfC NC_000913.3 1656747 1657457 R UPF0257 family lipoprotein complement(1656747..1657457) Escherichia coli str. K-12 substr. MG1655 946131 b1586 CDS ynfD NC_000913.3 1657565 1657870 D DUF1161 family periplasmic protein 1657565..1657870 Escherichia coli str. K-12 substr. MG1655 946133 b1587 CDS ynfE NC_000913.3 1658069 1660495 D putative selenate reductase, periplasmic 1658069..1660495 Escherichia coli str. K-12 substr. MG1655 946135 b1588 CDS ynfF NC_000913.3 1660556 1662979 D S- and N-oxide reductase, A subunit, periplasmic 1660556..1662979 Escherichia coli str. K-12 substr. MG1655 945268 b1589 CDS ynfG NC_000913.3 1662990 1663607 D oxidoreductase, Fe-S subunit 1662990..1663607 Escherichia coli str. K-12 substr. MG1655 945638 b1590 CDS ynfH NC_000913.3 1663609 1664463 D oxidoreductase, membrane subunit 1663609..1664463 Escherichia coli str. K-12 substr. MG1655 945822 b1591 CDS dmsD NC_000913.3 1664506 1665120 D twin-argninine leader-binding protein for DmsA and TorA 1664506..1665120 Escherichia coli str. K-12 substr. MG1655 945987 b1592 CDS clcB NC_000913.3 1665315 1666571 D H(+)/Cl(-) exchange transporter 1665315..1666571 Escherichia coli str. K-12 substr. MG1655 947179 b1593 CDS ynfK NC_000913.3 1666524 1667219 R putative dethiobiotin synthetase complement(1666524..1667219) Escherichia coli str. K-12 substr. MG1655 944927 b1594 CDS mlc NC_000913.3 1667344 1668564 R putative NAGC-like transcriptional regulator; glucosamine anaerobic growth regulon transcriptional repressor; autorepressor complement(1667344..1668564) Escherichia coli str. K-12 substr. MG1655 945510 b1595 CDS ynfL NC_000913.3 1668699 1669592 R putative transcriptional regulator LYSR-type; LysR family putative transcriptional regulator complement(1668699..1669592) Escherichia coli str. K-12 substr. MG1655 946136 b1596 CDS ynfM NC_000913.3 1669699 1670952 D putative transport protein; putative arabinose efflux transporter 1669699..1670952 Escherichia coli str. K-12 substr. MG1655 946138 b1597 CDS asr NC_000913.3 1671376 1671684 D acid shock protein; acid shock-inducible periplasmic protein 1671376..1671684 Escherichia coli str. K-12 substr. MG1655 945103 b4601 CDS ydgU NC_000913.3 1671777 1671860 D stationary phase-induced protein 1671777..1671860 Escherichia coli str. K-12 substr. MG1655 5061510 b1598 CDS ydgD NC_000913.3 1671960 1672781 D putative peptidase 1671960..1672781 Escherichia coli str. K-12 substr. MG1655 946436 b1599 CDS mdtI NC_000913.3 1672820 1673149 R possible chaperone; multidrug efflux system transporter complement(1672820..1673149) Escherichia coli str. K-12 substr. MG1655 947333 b1600 CDS mdtJ NC_000913.3 1673136 1673501 R possible chaperone; multidrug efflux system transporter complement(1673136..1673501) Escherichia coli str. K-12 substr. MG1655 946139 b1601 CDS tqsA NC_000913.3 1673913 1674947 D putative transport protein; pheromone AI-2 transporter 1673913..1674947 Escherichia coli str. K-12 substr. MG1655 946142 b1602 CDS pntB NC_000913.3 1674972 1676360 R pyridine nucleotide transhydrogenase, beta subunit complement(1674972..1676360) Escherichia coli str. K-12 substr. MG1655 946144 b1603 CDS pntA NC_000913.3 1676371 1677903 R pyridine nucleotide transhydrogenase, alpha subunit complement(1676371..1677903) Escherichia coli str. K-12 substr. MG1655 946628 b1604 CDS ydgH NC_000913.3 1678427 1679371 D DUF1471 family periplasmic protein 1678427..1679371 Escherichia coli str. K-12 substr. MG1655 945117 b1605 CDS ydgI NC_000913.3 1679557 1680939 D putative arginine/ornithine antiporter; putative arginine/ornithine antiporter transporter 1679557..1680939 Escherichia coli str. K-12 substr. MG1655 945159 b1606 CDS folM NC_000913.3 1680976 1681698 D putative oxidoreductase; dihydromonapterin reductase, NADPH-dependent; dihydrofolate reductase isozyme 1680976..1681698 Escherichia coli str. K-12 substr. MG1655 949096 b1607 CDS ydgC NC_000913.3 1681695 1682030 R GlpM family inner membrane protein complement(1681695..1682030) Escherichia coli str. K-12 substr. MG1655 945156 b1608 CDS rstA NC_000913.3 1682159 1682878 D response transcriptional regulatory protein (RstB sensor); response regulator of RstAB two-component system 1682159..1682878 Escherichia coli str. K-12 substr. MG1655 946199 b1609 CDS rstB NC_000913.3 1682882 1684183 D sensor histidine protein kinase (RstA regulator); sensory histidine kinase of RstAB two-component system 1682882..1684183 Escherichia coli str. K-12 substr. MG1655 948870 b1610 CDS tus NC_000913.3 1684259 1685188 D DNA-binding protein; inhibition of replication at Ter sites; inhibitor of replication at Ter, DNA-binding protein 1684259..1685188 Escherichia coli str. K-12 substr. MG1655 945135 b1611 CDS fumC NC_000913.3 1685185 1686588 R fumarase C= fumarate hydratase Class II; isozyme; fumarate hydratase (fumarase C),aerobic Class II complement(1685185..1686588) Escherichia coli str. K-12 substr. MG1655 946147 b1612 CDS fumA NC_000913.3 1686731 1688377 R fumarase A = fumarate hydratase Class I; aerobic isozyme; fumarate hydratase (fumarase A), aerobic Class I complement(1686731..1688377) Escherichia coli str. K-12 substr. MG1655 946826 b1613 CDS manA NC_000913.3 1688576 1689751 D mannose-6-phosphate isomerase 1688576..1689751 Escherichia coli str. K-12 substr. MG1655 944840 b1614 CDS ydgA NC_000913.3 1689852 1691360 D DUF945 family protein 1689852..1691360 Escherichia coli str. K-12 substr. MG1655 946172 b1615 CDS uidC NC_000913.3 1691586 1692851 R membrane-associated protein; putative outer membrane porin for beta-glucuronides porin protein complement(1691586..1692851) Escherichia coli str. K-12 substr. MG1655 944820 b1616 CDS uidB NC_000913.3 1692890 1694263 R glucuronide permease; glucuronide transporter complement(1692890..1694263) Escherichia coli str. K-12 substr. MG1655 947484 b1617 CDS uidA NC_000913.3 1694260 1696071 R beta-D-glucuronidase complement(1694260..1696071) Escherichia coli str. K-12 substr. MG1655 946149 b1618 CDS uidR NC_000913.3 1696462 1697052 R repressor for uid operon; transcriptional repressor complement(1696462..1697052) Escherichia coli str. K-12 substr. MG1655 946150 b1619 CDS hdhA NC_000913.3 1697273 1698040 R NAD-dependent 7alpha-hydroxysteroid dehydrogenase, dehydroxylation of bile acids; 7-alpha-hydroxysteroid dehydrogenase, NAD-dependent complement(1697273..1698040) Escherichia coli str. K-12 substr. MG1655 946151 b1620 CDS malI NC_000913.3 1698152 1699180 R maltose regulon regulatory protein; transcriptional repressor of Mal regulon complement(1698152..1699180) Escherichia coli str. K-12 substr. MG1655 947104 b1621 CDS malX NC_000913.3 1699355 1700947 D PTS system, maltose and glucose-specific IIABC component; maltose and glucose-specific PTS enzyme IIB component and IIC component 1699355..1700947 Escherichia coli str. K-12 substr. MG1655 946009 b1622 CDS malY NC_000913.3 1700957 1702129 D cystathionine beta-lyase; maltose regulon modulator; PLP-dependent beta-cystathionase and maltose regulon regulator 1700957..1702129 Escherichia coli str. K-12 substr. MG1655 945937 b1623 CDS add NC_000913.3 1702233 1703234 D adenosine deaminase 1702233..1703234 Escherichia coli str. K-12 substr. MG1655 945851 b1624 CDS ydgJ NC_000913.3 1703268 1704308 R putative oxidoreductase complement(1703268..1704308) Escherichia coli str. K-12 substr. MG1655 947164 b4409 CDS blr NC_000913.3 1704551 1704676 D beta-lactam resistance protein; beta-lactam resistance membrane protein; divisome-associated protein 1704551..1704676 Escherichia coli str. K-12 substr. MG1655 2847682 b1625 CDS cnu NC_000913.3 1704949 1705164 D nucleoid-associated oriC-binding protein; H-NS and StpA stabilizing factor 1704949..1705164 Escherichia coli str. K-12 substr. MG1655 946152 b1626 CDS ydgK NC_000913.3 1705250 1705690 D DUF2569 family inner membrane protein 1705250..1705690 Escherichia coli str. K-12 substr. MG1655 946154 b1627 CDS rsxA NC_000913.3 1705767 1706348 D SoxR iron-sulfur cluster reduction factor component; inner membrane protein of electron transport complex 1705767..1706348 Escherichia coli str. K-12 substr. MG1655 946148 b1628 CDS rsxB NC_000913.3 1706348 1706926 D SoxR iron-sulfur cluster reduction factor component; putative iron-sulfur protein 1706348..1706926 Escherichia coli str. K-12 substr. MG1655 946146 b1629 CDS rsxC NC_000913.3 1706919 1709141 D SoxR iron-sulfur cluster reduction factor component; putative membrane-associated NADH oxidoreductase of electron transport complex 1706919..1709141 Escherichia coli str. K-12 substr. MG1655 946137 b1630 CDS rsxD NC_000913.3 1709142 1710200 D electron transport complex protein; SoxR iron-sulfur cluster reduction factor component; putative membrane protein of electron transport complex 1709142..1710200 Escherichia coli str. K-12 substr. MG1655 946134 b1631 CDS rsxG NC_000913.3 1710204 1710824 D SoxR iron-sulfur cluster reduction factor component; putative membrane protein of electron transport complex 1710204..1710824 Escherichia coli str. K-12 substr. MG1655 946158 b1632 CDS rsxE NC_000913.3 1710828 1711523 D electron transport complex protein; SoxR iron-sulfur cluster reduction factor component; electron transport inner membrane NADH-quinone reductase 1710828..1711523 Escherichia coli str. K-12 substr. MG1655 947509 b1633 CDS nth NC_000913.3 1711523 1712158 D endonuclease III; specific for apurinic and/or apyrimidinic sites; DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III) 1711523..1712158 Escherichia coli str. K-12 substr. MG1655 947122 b1634 CDS dtpA NC_000913.3 1712769 1714271 D putative transport protein; dipeptide and tripeptide permease A 1712769..1714271 Escherichia coli str. K-12 substr. MG1655 947436 b1635 CDS gstA NC_000913.3 1714377 1714982 D glutathionine S-transferase 1714377..1714982 Escherichia coli str. K-12 substr. MG1655 945758 b1636 CDS pdxY NC_000913.3 1715026 1715889 R pyridoxal kinase 2 / pyridoxine kinase; pyridoxamine kinase complement(1715026..1715889) Escherichia coli str. K-12 substr. MG1655 946162 b1637 CDS tyrS NC_000913.3 1715948 1717222 R tyrosine tRNA synthetase; tyrosyl-tRNA synthetase complement(1715948..1717222) Escherichia coli str. K-12 substr. MG1655 948855 b1638 CDS pdxH NC_000913.3 1717351 1718007 R pyridoxinephosphate oxidase; pyridoxine 5'-phosphate oxidase complement(1717351..1718007) Escherichia coli str. K-12 substr. MG1655 946806 b1639 CDS mliC NC_000913.3 1718066 1718395 R inhibitor of c-type lysozyme, membrane-bound; putative lipoprotein complement(1718066..1718395) Escherichia coli str. K-12 substr. MG1655 946811 b1640 CDS anmK NC_000913.3 1718493 1719602 R anhydro-N-acetylmuramic acid kinase complement(1718493..1719602) Escherichia coli str. K-12 substr. MG1655 946810 b1641 CDS slyB NC_000913.3 1719876 1720343 D putative outer membrane protein; outer membrane lipoprotein 1719876..1720343 Escherichia coli str. K-12 substr. MG1655 946801 b1642 CDS slyA NC_000913.3 1720390 1720824 R transcriptional regulator for cryptic hemolysin; global transcriptional regulator complement(1720390..1720824) Escherichia coli str. K-12 substr. MG1655 946167 b1643 CDS ydhI NC_000913.3 1721025 1721261 D DUF1656 family putative inner membrane efflux pump associated protein 1721025..1721261 Escherichia coli str. K-12 substr. MG1655 947559 b1644 CDS ydhJ NC_000913.3 1721264 1722121 D putative membrane protein; putative membrane fusion protein (MFP) of YdhJK efflux pump 1721264..1722121 Escherichia coli str. K-12 substr. MG1655 946499 b1645 CDS ydhK NC_000913.3 1722121 1724133 D putative efflux protein (PET) component of YdhJK efflux pump 1722121..1724133 Escherichia coli str. K-12 substr. MG1655 946528 b1646 CDS sodC NC_000913.3 1724134 1724655 R superoxide dismutase precursor (Cu-Zn); superoxide dismutase, Cu, Zn, periplasmic complement(1724134..1724655) Escherichia coli str. K-12 substr. MG1655 945343 b1647 CDS ydhF NC_000913.3 1724736 1725632 R putative oxidoreductase complement(1724736..1725632) Escherichia coli str. K-12 substr. MG1655 946960 b1648 CDS ydhL NC_000913.3 1725681 1725920 R DUF1289 family protein complement(1725681..1725920) Escherichia coli str. K-12 substr. MG1655 946168 b1649 CDS nemR NC_000913.3 1726023 1726622 D transcriptional repressor for the nemRA-gloA operon, quinone-, glyoxal-, and HOCl-activated 1726023..1726622 Escherichia coli str. K-12 substr. MG1655 946166 b1650 CDS nemA NC_000913.3 1726659 1727756 D N-ethylmaleimide reductase; chromate reductase, quinone reductase, FMN-linked; N-Ethylmaleimide reductase; old yellow enzyme 1726659..1727756 Escherichia coli str. K-12 substr. MG1655 946164 b1651 CDS gloA NC_000913.3 1727837 1728244 D lactoylglutathione lyase; glyoxalase I, Ni-dependent 1727837..1728244 Escherichia coli str. K-12 substr. MG1655 946161 b1652 CDS rnt NC_000913.3 1728347 1728994 D RNase T, degrades tRNA; RNase T; exoribonuclease T; structured DNA 3' exonuclease; RNA processing; DNA repair 1728347..1728994 Escherichia coli str. K-12 substr. MG1655 946159 b1653 CDS lhr NC_000913.3 1729087 1733703 D member of ATP-dependent helicase superfamily II; putative ATP-dependent helicase 1729087..1733703 Escherichia coli str. K-12 substr. MG1655 946156 b1654 CDS grxD NC_000913.3 1733754 1734101 R glutaredoxin-4 complement(1733754..1734101) Escherichia coli str. K-12 substr. MG1655 946169 b1655 CDS mepH NC_000913.3 1734435 1735250 D putative lipoprotein; murein DD-endopeptidase, space-maker hydrolase 1734435..1735250 Escherichia coli str. K-12 substr. MG1655 945210 b1656 CDS sodB NC_000913.3 1735378 1735959 D superoxide dismutase, iron; superoxide dismutase, Fe 1735378..1735959 Escherichia coli str. K-12 substr. MG1655 944953 b1657 CDS ydhP NC_000913.3 1736121 1737290 R putative transport protein; putative MFS transporter, inner membrane protein complement(1736121..1737290) Escherichia coli str. K-12 substr. MG1655 947340 b4602 CDS ynhF NC_000913.3 1737456 1737545 R stress response membrane complement(1737456..1737545) Escherichia coli str. K-12 substr. MG1655 5061505 b1658 CDS purR NC_000913.3 1737844 1738869 D transcriptional repressor for pur regulon, glyA, glnB, prsA, speA; transcriptional repressor, hypoxanthine-binding 1737844..1738869 Escherichia coli str. K-12 substr. MG1655 945226 b1659 CDS ydhB NC_000913.3 1738866 1739798 R putative transcriptional regulator LYSR-type; LysR family putative transcriptional regulator complement(1738866..1739798) Escherichia coli str. K-12 substr. MG1655 945208 b1660 CDS ydhC NC_000913.3 1739911 1741122 D putative transport protein; putative arabinose efflux transporter 1739911..1741122 Escherichia coli str. K-12 substr. MG1655 946077 b1661 CDS cfa NC_000913.3 1741413 1742561 D cyclopropane fatty acyl phospholipid synthase; cyclopropane fatty acyl phospholipid synthase, SAM-dependent 1741413..1742561 Escherichia coli str. K-12 substr. MG1655 944811 b1662 CDS ribC NC_000913.3 1742601 1743242 R riboflavin synthase, alpha chain; riboflavin synthase, alpha subunit complement(1742601..1743242) Escherichia coli str. K-12 substr. MG1655 945848 b1663 CDS mdtK NC_000913.3 1743457 1744830 D multidrug resistance protein norM (Na(+)/drug antiporter) (Multidrug-efflux transporter); multidrug efflux system transporter 1743457..1744830 Escherichia coli str. K-12 substr. MG1655 945883 b1664 CDS ydhQ NC_000913.3 1744871 1746127 R possible enzyme; autotransporter adhesin-related protein complement(1744871..1746127) Escherichia coli str. K-12 substr. MG1655 944851 b1667 CDS ydhR NC_000913.3 1746700 1747005 D putative monooxygenase 1746700..1747005 Escherichia coli str. K-12 substr. MG1655 946177 b1668 CDS ydhS NC_000913.3 1747131 1748735 D putative oxidoreductase 1747131..1748735 Escherichia coli str. K-12 substr. MG1655 945786 b1669 CDS ydhT NC_000913.3 1748747 1749559 R FNR, Nar, NarP-regulated protein; putative subunit of YdhYVWXUT oxidoreductase complex complement(1748747..1749559) Escherichia coli str. K-12 substr. MG1655 945960 b1670 CDS ydhU NC_000913.3 1749563 1750348 R putative cytochrome b subunit of YdhYVWXUT oxidoreductase complex complement(1749563..1750348) Escherichia coli str. K-12 substr. MG1655 945608 b1671 CDS ydhX NC_000913.3 1750345 1751013 R putative oxidoreductase, Fe-S subunit; putative 4Fe-4S ferridoxin-type protein; FNR, Nar, NarP-regulated protein; putative subunit of YdhYVWXUT oxidoreductase complex complement(1750345..1751013) Escherichia coli str. K-12 substr. MG1655 947308 b1672 CDS ydhW NC_000913.3 1751077 1751724 R FNR, Nar, NarP-regulated protein; putative subunit of YdhYVWXUT oxidoreductase complex complement(1751077..1751724) Escherichia coli str. K-12 substr. MG1655 947180 b1673 CDS ydhV NC_000913.3 1751728 1753830 R putative oxidoreductase subunit complement(1751728..1753830) Escherichia coli str. K-12 substr. MG1655 948756 b1674 CDS ydhY NC_000913.3 1753851 1754477 R putative oxidoreductase, Fe-S subunit; putative 4Fe-4S ferridoxin-type protein; FNR, Nar, NarP-regulated protein; putative subunit of YdhYVWXUT oxidoreductase complex complement(1753851..1754477) Escherichia coli str. K-12 substr. MG1655 948749 b1675 CDS ydhZ NC_000913.3 1754932 1755141 R uncharacterized protein complement(1754932..1755141) Escherichia coli str. K-12 substr. MG1655 946180 b1676 CDS pykF NC_000913.3 1755698 1757110 D pyruvate kinase I (formerly F), fructose stimulated; pyruvate kinase I 1755698..1757110 Escherichia coli str. K-12 substr. MG1655 946179 b1677 CDS lpp NC_000913.3 1757421 1757657 D murein lipoprotein 1757421..1757657 Escherichia coli str. K-12 substr. MG1655 946175 b1678 CDS ldtE NC_000913.3 1757721 1758725 R murein L,D-transpeptidase complement(1757721..1758725) Escherichia coli str. K-12 substr. MG1655 946174 b1679 CDS sufE NC_000913.3 1758874 1759290 R sulfur acceptor protein complement(1758874..1759290) Escherichia coli str. K-12 substr. MG1655 946173 b1680 CDS sufS NC_000913.3 1759303 1760523 R cysteine desulfurase, stimulated by SufE; selenocysteine lyase, PLP-dependent complement(1759303..1760523) Escherichia coli str. K-12 substr. MG1655 946185 b1681 CDS sufD NC_000913.3 1760520 1761791 R component of SufBCD Fe-S cluster assembly scaffold complement(1760520..1761791) Escherichia coli str. K-12 substr. MG1655 944878 b1682 CDS sufC NC_000913.3 1761766 1762512 R putative ATP-binding component of a transport system; SufBCD Fe-S cluster assembly scaffold protein, ATP-binding protein complement(1761766..1762512) Escherichia coli str. K-12 substr. MG1655 946128 b1683 CDS sufB NC_000913.3 1762522 1764009 R component of SufBCD Fe-S cluster assembly scaffold complement(1762522..1764009) Escherichia coli str. K-12 substr. MG1655 945753 b1684 CDS sufA NC_000913.3 1764018 1764386 R Fe-S cluster assembly protein complement(1764018..1764386) Escherichia coli str. K-12 substr. MG1655 949014 b1685 CDS ydiH NC_000913.3 1764934 1765122 R uncharacterized protein complement(1764934..1765122) Escherichia coli str. K-12 substr. MG1655 946194 b1686 CDS menI NC_000913.3 1765222 1765632 R 1,4-dihydroxy-2-naphthoyl-CoA hydrolase complement(1765222..1765632) Escherichia coli str. K-12 substr. MG1655 946190 b1687 CDS ydiJ NC_000913.3 1765629 1768685 R putative oxidase; putative FAD-linked oxidoreductase complement(1765629..1768685) Escherichia coli str. K-12 substr. MG1655 946189 b1688 CDS ydiK NC_000913.3 1769074 1770186 D UPF0118 family inner membrane protein 1769074..1770186 Escherichia coli str. K-12 substr. MG1655 946183 b1689 CDS ydiL NC_000913.3 1770615 1770971 D putative HTH domain DNA-binding protein 1770615..1770971 Escherichia coli str. K-12 substr. MG1655 946181 b1690 CDS ydiM NC_000913.3 1771071 1772285 D putative transport system permease protein; putative MFS transporter, membrane protein 1771071..1772285 Escherichia coli str. K-12 substr. MG1655 946196 b1691 CDS ydiN NC_000913.3 1772512 1773777 D putative amino acid/amine transport protein; putative MFS transporter, membrane protein 1772512..1773777 Escherichia coli str. K-12 substr. MG1655 946198 b1692 CDS ydiB NC_000913.3 1773789 1774655 D putative oxidoreductase; quinate/shikimate 5-dehydrogenase, NAD(P)-binding 1773789..1774655 Escherichia coli str. K-12 substr. MG1655 946200 b1693 CDS aroD NC_000913.3 1774686 1775444 D 3-dehydroquinate dehydratase 1774686..1775444 Escherichia coli str. K-12 substr. MG1655 946210 b1694 CDS ydiF NC_000913.3 1775587 1777182 D putative enzyme; putative acetyl-CoA:acetoacetyl-CoA transferase: alpha subunit/beta subunit 1775587..1777182 Escherichia coli str. K-12 substr. MG1655 946211 b1695 CDS ydiO NC_000913.3 1777196 1778347 D putative oxidoreductase; putative acyl-CoA dehydrogenase 1777196..1778347 Escherichia coli str. K-12 substr. MG1655 945626 b1696 CDS ydiP NC_000913.3 1778390 1779301 R putative ARAC-type regulatory protein; putative DNA-binding transcriptional regulator complement(1778390..1779301) Escherichia coli str. K-12 substr. MG1655 945095 b1697 CDS ydiQ NC_000913.3 1779617 1780381 D putative transport protein; putative electron transfer flavoprotein subunit 1779617..1780381 Escherichia coli str. K-12 substr. MG1655 946482 b1698 CDS ydiR NC_000913.3 1780401 1781339 D putative flavoprotein; putative electron transfer flavoprotein, FAD-binding subunit 1780401..1781339 Escherichia coli str. K-12 substr. MG1655 945688 b1699 CDS ydiS NC_000913.3 1781395 1782684 D flavoprotein; probably electron transport; putative oxidoreductase 1781395..1782684 Escherichia coli str. K-12 substr. MG1655 946212 b1700 CDS ydiT NC_000913.3 1782681 1782974 D putative 3Fe-4S ferredoxin-type protein 1782681..1782974 Escherichia coli str. K-12 substr. MG1655 946214 b1701 CDS fadK NC_000913.3 1783031 1784677 D putative ligase/synthetase; short chain acyl-CoA synthetase, anaerobic 1783031..1784677 Escherichia coli str. K-12 substr. MG1655 946213 b1702 CDS ppsA NC_000913.3 1784734 1787112 R phosphoenolpyruvate synthase complement(1784734..1787112) Escherichia coli str. K-12 substr. MG1655 946209 b1703 CDS ppsR NC_000913.3 1787445 1788278 D PEP synthase kinase and PEP synthase pyrophosphorylase 1787445..1788278 Escherichia coli str. K-12 substr. MG1655 946207 b1704 CDS aroH NC_000913.3 1788435 1789481 D 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase, tryptophan repressible); 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, tryptophan repressible 1788435..1789481 Escherichia coli str. K-12 substr. MG1655 946229 b1705 CDS ydiE NC_000913.3 1789613 1789804 D hemin uptake protein HemP homolog 1789613..1789804 Escherichia coli str. K-12 substr. MG1655 946205 b1706 CDS ydiU NC_000913.3 1789808 1791244 R UPF0061 family protein complement(1789808..1791244) Escherichia coli str. K-12 substr. MG1655 946219 b1707 CDS ydiV NC_000913.3 1791307 1792020 R anti-FlhD4C2 factor, inactive EAL family phosphodiesterase complement(1791307..1792020) Escherichia coli str. K-12 substr. MG1655 946217 b1708 CDS nlpC NC_000913.3 1792267 1792731 R lipoprotein; putative C40 clan peptidase lipoprotein complement(1792267..1792731) Escherichia coli str. K-12 substr. MG1655 946220 b1709 CDS btuD NC_000913.3 1792809 1793558 R ATP-binding component of vitamin B12 transport system; vitamin B12 ABC transporter ATPase complement(1792809..1793558) Escherichia coli str. K-12 substr. MG1655 945751 b1710 CDS btuE NC_000913.3 1793558 1794109 R vitamin B12 transport; glutathione peroxidase complement(1793558..1794109) Escherichia coli str. K-12 substr. MG1655 945915 b1711 CDS btuC NC_000913.3 1794172 1795152 R vitamin B12 transport permease protein; vitamin B12 ABC transporter permease complement(1794172..1795152) Escherichia coli str. K-12 substr. MG1655 945877 b1712 CDS ihfA NC_000913.3 1795253 1795552 R integration host factor (IHF), alpha subunit; site specific recombination; integration host factor (IHF), DNA-binding protein, alpha subunit complement(1795253..1795552) Escherichia coli str. K-12 substr. MG1655 945472 b1713 CDS pheT NC_000913.3 1795557 1797944 R phenylalanine tRNA synthetase, beta-subunit; phenylalanine tRNA synthetase, beta subunit complement(1795557..1797944) Escherichia coli str. K-12 substr. MG1655 945382 b1714 CDS pheS NC_000913.3 1797959 1798942 R phenylalanine tRNA synthetase, alpha-subunit; phenylalanine tRNA synthetase, alpha subunit complement(1797959..1798942) Escherichia coli str. K-12 substr. MG1655 946223 b1715 CDS pheM NC_000913.3 1799226 1799270 R phenylalanyl-tRNA synthetase (pheST) operon leader peptide; phenylalanyl-tRNA synthetase operon leader peptide complement(1799226..1799270) Escherichia coli str. K-12 substr. MG1655 947212 b1716 CDS rplT NC_000913.3 1799393 1799749 R 50S ribosomal subunit protein L20, and regulator; 50S ribosomal subunit protein L20 complement(1799393..1799749) Escherichia coli str. K-12 substr. MG1655 945152 b1717 CDS rpmI NC_000913.3 1799802 1799999 R 50S ribosomal subunit protein A; 50S ribosomal subunit protein L35 complement(1799802..1799999) Escherichia coli str. K-12 substr. MG1655 946349 b1718 CDS infC NC_000913.3 1800096 1800638 R translation initiation factor IF-3 complement(1800096..1800638) Escherichia coli str. K-12 substr. MG1655 946225 b1719 CDS thrS NC_000913.3 1800642 1802570 R threonine tRNA synthetase; threonyl-tRNA synthetase complement(1800642..1802570) Escherichia coli str. K-12 substr. MG1655 946222 b4494 CDS arpB NC_000913.3 1803094 1804993 D pseudogene, ankyrin repeats; <NA> join(1803094..1803519,1803518..1804993) Escherichia coli str. K-12 substr. MG1655 948935 b4535 CDS yniD NC_000913.3 1805165 1805272 D uncharacterized protein 1805165..1805272 Escherichia coli str. K-12 substr. MG1655 1450269 b1722 CDS ydiY NC_000913.3 1805325 1806083 R acid-inducible putative outer membrane protein complement(1805325..1806083) Escherichia coli str. K-12 substr. MG1655 946218 b1723 CDS pfkB NC_000913.3 1806370 1807299 D 6-phosphofructokinase II; suppressor of pfkA; 6-phosphofructokinase II 1806370..1807299 Escherichia coli str. K-12 substr. MG1655 946230 b1724 CDS ydiZ NC_000913.3 1807400 1807690 D uncharacterized protein 1807400..1807690 Escherichia coli str. K-12 substr. MG1655 946232 b1725 CDS yniA NC_000913.3 1807796 1808656 D fructosamine kinase family protein 1807796..1808656 Escherichia coli str. K-12 substr. MG1655 946236 b1726 CDS yniB NC_000913.3 1808697 1809233 R putative inner membrane protein complement(1808697..1809233) Escherichia coli str. K-12 substr. MG1655 945140 b1727 CDS yniC NC_000913.3 1809380 1810048 D putative phosphatase; 2-deoxyglucose-6-P phosphatase 1809380..1810048 Escherichia coli str. K-12 substr. MG1655 945632 b1728 CDS ydjM NC_000913.3 1810211 1810801 D inner membrane protein regulated by LexA 1810211..1810801 Escherichia coli str. K-12 substr. MG1655 945644 b1729 CDS ydjN NC_000913.3 1810934 1812325 D putative transporter 1810934..1812325 Escherichia coli str. K-12 substr. MG1655 946238 b1730 CDS ydjO NC_000913.3 1812329 1813132 R uncharacterized protein complement(1812329..1813132) Escherichia coli str. K-12 substr. MG1655 946237 b1731 CDS cedA NC_000913.3 1813421 1813663 R cell division modulator complement(1813421..1813663) Escherichia coli str. K-12 substr. MG1655 946235 b1732 CDS katE NC_000913.3 1813867 1816128 D catalase; hydroperoxidase HPII(III); catalase HPII, heme d-containing 1813867..1816128 Escherichia coli str. K-12 substr. MG1655 946234 b1733 CDS chbG NC_000913.3 1816386 1817135 R chito-oligosaccharide deacetylase complement(1816386..1817135) Escherichia coli str. K-12 substr. MG1655 946231 b1734 CDS chbF NC_000913.3 1817148 1818500 R phospho-chitobiase; general 6-phospho-beta-glucosidase activity complement(1817148..1818500) Escherichia coli str. K-12 substr. MG1655 946266 b1735 CDS chbR NC_000913.3 1818605 1819447 R negative transcriptional regulator of cel operon; repressor of chb operon for N,N'-diacetylchitobiose utilization complement(1818605..1819447) Escherichia coli str. K-12 substr. MG1655 946247 b1736 CDS chbA NC_000913.3 1819455 1819805 R PTS family enzyme IIA, cellobiose/arbutin/salicin sugar-specific; N,N'-diacetylchitobiose-specific enzyme IIA component of PTS complement(1819455..1819805) Escherichia coli str. K-12 substr. MG1655 946244 b1737 CDS chbC NC_000913.3 1819856 1821214 R PEP-dependent phosphotransferase enzyme II for cellobiose, arbutin, and salicin; N,N'-diacetylchitobiose-specific enzyme IIC component of PTS complement(1819856..1821214) Escherichia coli str. K-12 substr. MG1655 945982 b1738 CDS chbB NC_000913.3 1821299 1821619 R PTS family enzyme IIB, cellobiose/arbutin/salicin sugar-specific; N,N'-diacetylchitobiose-specific enzyme IIB component of PTS complement(1821299..1821619) Escherichia coli str. K-12 substr. MG1655 945339 b1739 CDS osmE NC_000913.3 1821918 1822256 R activator of ntrL gene; osmotically-inducible lipoprotein complement(1821918..1822256) Escherichia coli str. K-12 substr. MG1655 945305 b1740 CDS nadE NC_000913.3 1822458 1823285 D NAD synthetase, prefers NH3 over glutamine; NAD synthetase, NH3/glutamine-dependent 1822458..1823285 Escherichia coli str. K-12 substr. MG1655 946946 b1741 CDS cho NC_000913.3 1823515 1824402 D putative excinuclease subunit; endonuclease of nucleotide excision repair 1823515..1824402 Escherichia coli str. K-12 substr. MG1655 948996 b1742 CDS ves NC_000913.3 1824362 1824937 R cold- and stress-inducible protein complement(1824362..1824937) Escherichia coli str. K-12 substr. MG1655 946245 b1743 CDS spy NC_000913.3 1825140 1825625 R periplasmic protein related to spheroblast formation; periplasmic ATP-independent protein refolding chaperone, stress-induced complement(1825140..1825625) Escherichia coli str. K-12 substr. MG1655 946253 b1744 CDS astE NC_000913.3 1825955 1826923 R succinylglutamate desuccinylase complement(1825955..1826923) Escherichia coli str. K-12 substr. MG1655 946256 b1745 CDS astB NC_000913.3 1826916 1828259 R succinylarginine dihydrolase complement(1826916..1828259) Escherichia coli str. K-12 substr. MG1655 946259 b1746 CDS astD NC_000913.3 1828256 1829734 R succinylglutamic semialdehyde dehydrogenase complement(1828256..1829734) Escherichia coli str. K-12 substr. MG1655 946260 b1747 CDS astA NC_000913.3 1829731 1830765 R arginine succinyltransferase complement(1829731..1830765) Escherichia coli str. K-12 substr. MG1655 946261 b1748 CDS astC NC_000913.3 1830762 1831982 R acetylornithine delta-aminotransferase; succinylornithine transaminase, PLP-dependent complement(1830762..1831982) Escherichia coli str. K-12 substr. MG1655 946255 b1749 CDS xthA NC_000913.3 1832428 1833234 D exonuclease III 1832428..1833234 Escherichia coli str. K-12 substr. MG1655 946254 b1750 CDS ydjX NC_000913.3 1833401 1834111 D TVP38/TMEM64 family inner membrane protein 1833401..1834111 Escherichia coli str. K-12 substr. MG1655 946250 b1751 CDS ydjY NC_000913.3 1834116 1834793 D putative ferrodoxin-like lipoprotein 1834116..1834793 Escherichia coli str. K-12 substr. MG1655 946248 b1752 CDS ydjZ NC_000913.3 1834808 1835515 D TVP38/TMEM64 family inner membrane protein 1834808..1835515 Escherichia coli str. K-12 substr. MG1655 946269 b1753 CDS ynjA NC_000913.3 1835515 1836063 D carboxymuconolactone decarboxylase family protein 1835515..1836063 Escherichia coli str. K-12 substr. MG1655 946270 b1754 CDS ynjB NC_000913.3 1836073 1837239 D putative ABC transporter periplasmic binding protein 1836073..1837239 Escherichia coli str. K-12 substr. MG1655 946271 b1755 CDS ynjC NC_000913.3 1837212 1838747 D putative transport system permease protein; putative ABC transporter permease 1837212..1838747 Escherichia coli str. K-12 substr. MG1655 946273 b1756 CDS ynjD NC_000913.3 1838747 1839400 D putative ATP-binding component of a transport system; putative ABC transporter ATPase 1838747..1839400 Escherichia coli str. K-12 substr. MG1655 944965 b1757 CDS ynjE NC_000913.3 1839467 1840774 D putative thiosulfate sulfur transferase; molybdopterin synthase sulfurtransferase 1839467..1840774 Escherichia coli str. K-12 substr. MG1655 946505 b1758 CDS ynjF NC_000913.3 1840783 1841403 R putative cytochrome oxidase; CDP-alcohol phosphatidyltransferase family inner membrane protein complement(1840783..1841403) Escherichia coli str. K-12 substr. MG1655 946221 b1759 CDS nudG NC_000913.3 1841490 1841897 D 5-hydroxy-CTP pyrophosphohydrolase; CTP pyrophosphohydrolase; also hydrolyzes 2-hydroxy-dATP, 8-hydroxy-dGTP, 5-hydroxy-CTP, dCTP and 5-methyl-dCTP 1841490..1841897 Escherichia coli str. K-12 substr. MG1655 946277 b1760 CDS ynjH NC_000913.3 1841863 1842135 R DUF1496 family protein complement(1841863..1842135) Escherichia coli str. K-12 substr. MG1655 946279 b1761 CDS gdhA NC_000913.3 1842371 1843714 D NADP-specific glutamate dehydrogenase; glutamate dehydrogenase, NADP-specific 1842371..1843714 Escherichia coli str. K-12 substr. MG1655 946802 b1762 CDS ynjI NC_000913.3 1843831 1844871 R inner membrane protein complement(1843831..1844871) Escherichia coli str. K-12 substr. MG1655 946239 b1763 CDS topB NC_000913.3 1844999 1846960 R DNA topoisomerase III complement(1844999..1846960) Escherichia coli str. K-12 substr. MG1655 946141 b1764 CDS selD NC_000913.3 1846965 1848008 R selenophosphate synthase, H(2)Se added to acrylyl-tRNA; selenophosphate synthase complement(1846965..1848008) Escherichia coli str. K-12 substr. MG1655 946768 b1765 CDS ydjA NC_000913.3 1848125 1848676 R putative oxidoreductase complement(1848125..1848676) Escherichia coli str. K-12 substr. MG1655 945964 b1766 CDS sppA NC_000913.3 1848837 1850693 D protease IV, a signal peptide peptidase; protease IV (signal peptide peptidase) 1848837..1850693 Escherichia coli str. K-12 substr. MG1655 946281 b1767 CDS ansA NC_000913.3 1850860 1851876 D cytoplasmic L-asparaginase 1 1850860..1851876 Escherichia coli str. K-12 substr. MG1655 946278 b1768 CDS pncA NC_000913.3 1851887 1852528 D nicotinamidase/pyrazinamidase 1851887..1852528 Escherichia coli str. K-12 substr. MG1655 946276 b1769 CDS ydjE NC_000913.3 1852621 1853979 R putative transport protein; putative MFS sugar transporter, membrane protein complement(1852621..1853979) Escherichia coli str. K-12 substr. MG1655 946274 b1770 CDS ydjF NC_000913.3 1854096 1854854 R putative DEOR-type transcriptional regulator; putative DNA-binding transcriptional regulator complement(1854096..1854854) Escherichia coli str. K-12 substr. MG1655 946272 b1771 CDS ydjG NC_000913.3 1854991 1855971 R methylglyoxal reductase, NADH-dependent complement(1854991..1855971) Escherichia coli str. K-12 substr. MG1655 946283 b1772 CDS ydjH NC_000913.3 1855981 1856928 R putative kinase complement(1855981..1856928) Escherichia coli str. K-12 substr. MG1655 946285 b1773 CDS ydjI NC_000913.3 1856933 1857769 R putative aldolase complement(1856933..1857769) Escherichia coli str. K-12 substr. MG1655 946291 b1774 CDS ydjJ NC_000913.3 1857790 1858833 R putative oxidoreductase; putative Zn-dependent NAD(P)-binding oxidoreductase complement(1857790..1858833) Escherichia coli str. K-12 substr. MG1655 946292 b1775 CDS ydjK NC_000913.3 1858850 1860229 R putative transport protein; putative MFS sugar transporter, membrane protein complement(1858850..1860229) Escherichia coli str. K-12 substr. MG1655 946293 b1776 CDS ydjL NC_000913.3 1860256 1861332 R putative Zn-dependent NAD(P)-binding oxidoreductase complement(1860256..1861332) Escherichia coli str. K-12 substr. MG1655 946299 b1777 CDS yeaC NC_000913.3 1861702 1861974 R DUF1315 family protein complement(1861702..1861974) Escherichia coli str. K-12 substr. MG1655 947074 b1778 CDS msrB NC_000913.3 1862016 1862429 R methionine sulfoxide reductase B complement(1862016..1862429) Escherichia coli str. K-12 substr. MG1655 947188 b1779 CDS gapA NC_000913.3 1862771 1863766 D glyceraldehyde-3-phosphate dehydrogenase A 1862771..1863766 Escherichia coli str. K-12 substr. MG1655 947679 b1780 CDS yeaD NC_000913.3 1863850 1864734 D D-hexose-6-phosphate epimerase-like protein 1863850..1864734 Escherichia coli str. K-12 substr. MG1655 946572 b1781 CDS yeaE NC_000913.3 1864782 1865636 R putative an aldehyde reductase; aldo-keto reductase, methylglyoxal to acetol, NADPH-dependent complement(1864782..1865636) Escherichia coli str. K-12 substr. MG1655 946302 b1782 CDS mipA NC_000913.3 1865726 1866472 R scaffolding protein for murein synthesizing machinery complement(1865726..1866472) Escherichia coli str. K-12 substr. MG1655 946301 b1783 CDS yeaG NC_000913.3 1866908 1868842 D protein kinase, endogenous substrate unidentified; autokinase 1866908..1868842 Escherichia coli str. K-12 substr. MG1655 946297 b1784 CDS yeaH NC_000913.3 1868955 1870238 D UPF0229 family protein 1868955..1870238 Escherichia coli str. K-12 substr. MG1655 946296 b1785 CDS yeaI NC_000913.3 1870385 1871860 D putative membrane-anchored diguanylate cyclase 1870385..1871860 Escherichia coli str. K-12 substr. MG1655 946366 b1786 CDS yeaJ NC_000913.3 1872041 1873531 D putative diguanylate cyclase 1872041..1873531 Escherichia coli str. K-12 substr. MG1655 946290 b1787 CDS yeaK NC_000913.3 1873574 1874077 D aminoacyl-tRNA editing domain protein 1873574..1874077 Escherichia coli str. K-12 substr. MG1655 946303 b1788 CDS yoaI NC_000913.3 1874078 1874182 R uncharacterized protein complement(1874078..1874182) Escherichia coli str. K-12 substr. MG1655 946294 b1789 CDS yeaL NC_000913.3 1874352 1874798 D UPF0756 family putative inner membrane protein 1874352..1874798 Escherichia coli str. K-12 substr. MG1655 946307 b1790 CDS yeaM NC_000913.3 1874755 1875576 R putative ARAC-type regulatory protein; putative DNA-binding transcriptional regulator complement(1874755..1875576) Escherichia coli str. K-12 substr. MG1655 946590 b1791 CDS yeaN NC_000913.3 1875673 1876854 D putative amino acid/amine transport protein; putative MFS transporter, inner membrane protein 1875673..1876854 Escherichia coli str. K-12 substr. MG1655 946309 b1792 CDS yeaO NC_000913.3 1876909 1877256 D DUF488 family protein 1876909..1877256 Escherichia coli str. K-12 substr. MG1655 945675 b1793 CDS yoaF NC_000913.3 1877278 1877532 R DUF333 family outer membrane lipoprotein complement(1877278..1877532) Escherichia coli str. K-12 substr. MG1655 946310 b1794 CDS yeaP NC_000913.3 1877715 1878740 D diguanylate cyclase 1877715..1878740 Escherichia coli str. K-12 substr. MG1655 948969 b4676 CDS yoaK NC_000913.3 1878773 1878871 D inner membrane-associated protein 1878773..1878871 Escherichia coli str. K-12 substr. MG1655 7751647 b4675 CDS yoaJ NC_000913.3 1878874 1878948 D inner membrane-associated protein 1878874..1878948 Escherichia coli str. K-12 substr. MG1655 7751648 b1795 CDS yeaQ NC_000913.3 1879007 1879255 R UPF0410 family protein complement(1879007..1879255) Escherichia coli str. K-12 substr. MG1655 946311 b1796 CDS yoaG NC_000913.3 1879403 1879585 R uncharacterized protein complement(1879403..1879585) Escherichia coli str. K-12 substr. MG1655 946314 b1797 CDS yeaR NC_000913.3 1879589 1879948 R DUF1971 family protein, nitrate-inducible complement(1879589..1879948) Escherichia coli str. K-12 substr. MG1655 946317 b1798 CDS leuE NC_000913.3 1880121 1880759 R leucine efflux protein complement(1880121..1880759) Escherichia coli str. K-12 substr. MG1655 946157 b1799 CDS dmlR NC_000913.3 1880886 1881809 R putative transcriptional regulator LYSR-type; transcriptional activator of dmlA complement(1880886..1881809) Escherichia coli str. K-12 substr. MG1655 946316 b1800 CDS dmlA NC_000913.3 1881912 1882997 D putative tartrate dehydrogenase; D-malate oxidase, NAD-dependent; putative tartrate dehydrogenase 1881912..1882997 Escherichia coli str. K-12 substr. MG1655 946319 b1801 CDS yeaV NC_000913.3 1883188 1884633 D putative transport protein; putative transporter 1883188..1884633 Escherichia coli str. K-12 substr. MG1655 947326 b1802 CDS yeaW NC_000913.3 1884665 1885789 D putative YeaWX dioxygenase alpha subunit; 2Fe-2S cluster 1884665..1885789 Escherichia coli str. K-12 substr. MG1655 946325 b1803 CDS yeaX NC_000913.3 1885845 1886810 D putative diogenase beta subunit; putative YeaWX dioxygenase beta subunit, reductase component 1885845..1886810 Escherichia coli str. K-12 substr. MG1655 946329 b1804 CDS rnd NC_000913.3 1886864 1887991 R RNase D, processes tRNA precursor; ribonuclease D complement(1886864..1887991) Escherichia coli str. K-12 substr. MG1655 946328 b1805 CDS fadD NC_000913.3 1888061 1889746 R acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase) complement(1888061..1889746) Escherichia coli str. K-12 substr. MG1655 946327 b1806 CDS yeaY NC_000913.3 1889951 1890532 R putative outer membrane protein; Slp family lipoprotein, RpoE-regulated complement(1889951..1890532) Escherichia coli str. K-12 substr. MG1655 946312 b1807 CDS tsaB NC_000913.3 1890572 1891267 R tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein; binding partner and protease for TsaD complement(1890572..1891267) Escherichia coli str. K-12 substr. MG1655 946304 b1808 CDS yoaA NC_000913.3 1891325 1893235 R putative enzyme; putative ATP-dependent helicase, DinG family complement(1891325..1893235) Escherichia coli str. K-12 substr. MG1655 946305 b1809 CDS yoaB NC_000913.3 1893367 1893711 D putative reactive intermediate deaminase 1893367..1893711 Escherichia coli str. K-12 substr. MG1655 946357 b1810 CDS yoaC NC_000913.3 1894133 1894432 D DUF1889 family protein 1894133..1894432 Escherichia coli str. K-12 substr. MG1655 946308 b1811 CDS yoaH NC_000913.3 1894552 1894731 R UPF0181 family protein complement(1894552..1894731) Escherichia coli str. K-12 substr. MG1655 946346 b1812 CDS pabB NC_000913.3 1894805 1896166 D p-aminobenzoate synthetase, component I; aminodeoxychorismate synthase, subunit I 1894805..1896166 Escherichia coli str. K-12 substr. MG1655 946337 b1813 CDS nudL NC_000913.3 1896170 1896748 D putative CoA pyrophosphohydrolase, weak 3-phosphohydroxypyruvate phosphatase 1896170..1896748 Escherichia coli str. K-12 substr. MG1655 946330 b1814 CDS sdaA NC_000913.3 1896932 1898296 D L-serine deaminase; L-serine dehydratase 1 1896932..1898296 Escherichia coli str. K-12 substr. MG1655 946331 b1815 CDS yoaD NC_000913.3 1898427 1900025 D putative membrane-anchored cyclic-di-GMP phosphodiesterase, regulator of cellulose production 1898427..1900025 Escherichia coli str. K-12 substr. MG1655 946336 b1816 CDS yoaE NC_000913.3 1900029 1901585 R putative transport protein; putative membrane protein/conserved protein complement(1900029..1901585) Escherichia coli str. K-12 substr. MG1655 946335 b1817 CDS manX NC_000913.3 1902048 1903019 D PTS enzyme IIAB, mannose-specific; fused mannose-specific PTS enzymes: IIA component/IIB component 1902048..1903019 Escherichia coli str. K-12 substr. MG1655 946334 b1818 CDS manY NC_000913.3 1903082 1903882 D PTS enzyme IIC, mannose-specific; mannose-specific enzyme IIC component of PTS 1903082..1903882 Escherichia coli str. K-12 substr. MG1655 946332 b1819 CDS manZ NC_000913.3 1903895 1904746 D PTS enzyme IID, mannose-specific; mannose-specific enzyme IID component of PTS 1903895..1904746 Escherichia coli str. K-12 substr. MG1655 946342 b1820 CDS yobD NC_000913.3 1904801 1905259 D UPF0266 family inner membrane protein 1904801..1905259 Escherichia coli str. K-12 substr. MG1655 946343 b1821 CDS mntP NC_000913.3 1905688 1906254 D putative Mn(2+) efflux pump, mntR-regulated 1905688..1906254 Escherichia coli str. K-12 substr. MG1655 946341 b1822 CDS rlmA NC_000913.3 1906251 1907060 R 23S rRNA m(1)G745 methyltransferase, SAM-dependent complement(1906251..1907060) Escherichia coli str. K-12 substr. MG1655 946340 b1823 CDS cspC NC_000913.3 1907226 1907435 R cold shock protein; stress protein, member of the CspA-family complement(1907226..1907435) Escherichia coli str. K-12 substr. MG1655 946339 b1824 CDS yobF NC_000913.3 1907448 1907591 R DUF2527 family heat-induced protein complement(1907448..1907591) Escherichia coli str. K-12 substr. MG1655 946338 b1825 CDS yebO NC_000913.3 1908261 1908548 R putative inner membrane protein complement(1908261..1908548) Escherichia coli str. K-12 substr. MG1655 946350 b1826 CDS mgrB NC_000913.3 1908623 1908766 R regulatory peptide for PhoPQ, feedback inhibition complement(1908623..1908766) Escherichia coli str. K-12 substr. MG1655 946351 b4536 CDS yobH NC_000913.3 1908925 1909164 D uncharacterized protein 1908925..1909164 Escherichia coli str. K-12 substr. MG1655 1450271 b1827 CDS kdgR NC_000913.3 1909308 1910099 R KDG regulon transcriptional repressor complement(1909308..1910099) Escherichia coli str. K-12 substr. MG1655 946129 b1828 CDS yebQ NC_000913.3 1910276 1911649 D putative transport protein; putative transporter 1910276..1911649 Escherichia coli str. K-12 substr. MG1655 946048 b1829 CDS htpX NC_000913.3 1911695 1912576 R heat shock protein, integral membrane protein; putative endopeptidase complement(1911695..1912576) Escherichia coli str. K-12 substr. MG1655 946076 b1830 CDS prc NC_000913.3 1912768 1914816 R carboxy-terminal protease for penicillin-binding protein 3 complement(1912768..1914816) Escherichia coli str. K-12 substr. MG1655 946096 b1831 CDS proQ NC_000913.3 1914836 1915534 R regulator of ProP; putative structural element which influences activation of ProP; RNA chaperone, putative ProP translation regulator complement(1914836..1915534) Escherichia coli str. K-12 substr. MG1655 948950 b1832 CDS msrC NC_000913.3 1915631 1916128 R free methionine-(R)-sulfoxide reductase complement(1915631..1916128) Escherichia coli str. K-12 substr. MG1655 946086 b1833 CDS yebS NC_000913.3 1916258 1917541 D inner membrane PqiA domain protein 1916258..1917541 Escherichia coli str. K-12 substr. MG1655 946353 b1834 CDS yebT NC_000913.3 1917510 1920143 D MCE domain protein 1917510..1920143 Escherichia coli str. K-12 substr. MG1655 946352 b1835 CDS rsmF NC_000913.3 1920223 1921662 D 16S rRNA m(5)C1407 methyltransferase, SAM-dependent 1920223..1921662 Escherichia coli str. K-12 substr. MG1655 946348 b1836 CDS yebV NC_000913.3 1921780 1922016 D uncharacterized protein 1921780..1922016 Escherichia coli str. K-12 substr. MG1655 946347 b1837 CDS yebW NC_000913.3 1922121 1922312 D uncharacterized protein 1922121..1922312 Escherichia coli str. K-12 substr. MG1655 946354 b1838 CDS pphA NC_000913.3 1922313 1922969 R serine/threonine-specific protein phosphatase 1 complement(1922313..1922969) Escherichia coli str. K-12 substr. MG1655 946356 b1839 CDS yebY NC_000913.3 1923365 1923706 R DUF2511 family protein complement(1923365..1923706) Escherichia coli str. K-12 substr. MG1655 947014 b1840 CDS yebZ NC_000913.3 1923719 1924591 R putative resistance protein; inner membrane protein complement(1923719..1924591) Escherichia coli str. K-12 substr. MG1655 947078 b1841 CDS yobA NC_000913.3 1924595 1924969 R CopC family protein complement(1924595..1924969) Escherichia coli str. K-12 substr. MG1655 948315 b1842 CDS holE NC_000913.3 1925108 1925338 D DNA polymerase III, theta subunit 1925108..1925338 Escherichia coli str. K-12 substr. MG1655 947471 b1843 CDS yobB NC_000913.3 1925440 1926096 D C-N hydrolase family protein 1925440..1926096 Escherichia coli str. K-12 substr. MG1655 948329 b1844 CDS exoX NC_000913.3 1926120 1926782 D exodeoxyribonuclease 10; DNA exonuclease X 1926120..1926782 Escherichia coli str. K-12 substr. MG1655 946361 b1845 CDS ptrB NC_000913.3 1926779 1928839 R protease II complement(1926779..1928839) Escherichia coli str. K-12 substr. MG1655 946358 b1846 CDS yebE NC_000913.3 1929048 1929707 R DUF533 family inner membrane protein complement(1929048..1929707) Escherichia coli str. K-12 substr. MG1655 946355 b1847 CDS yebF NC_000913.3 1930034 1930390 R extracellular Colicin M immunity family protein complement(1930034..1930390) Escherichia coli str. K-12 substr. MG1655 946363 b1848 CDS yebG NC_000913.3 1930457 1930747 R DNA damage-inducible protein regulated by LexA complement(1930457..1930747) Escherichia coli str. K-12 substr. MG1655 946364 b1849 CDS purT NC_000913.3 1930881 1932059 D phosphoribosylglycinamide formyltransferase 2 1930881..1932059 Escherichia coli str. K-12 substr. MG1655 946368 b1850 CDS eda NC_000913.3 1932115 1932756 R 2-keto-3-deoxygluconate 6-phosphate aldolase and 2-keto-4-hydroxyglutarate aldolase; KHG/KDPG aldolase; 2-dehydro-3-deoxy-phosphogluconate/4-hydroxy-2- oxoglutarate aldolase complement(1932115..1932756) Escherichia coli str. K-12 substr. MG1655 946367 b1851 CDS edd NC_000913.3 1932793 1934604 R 6-phosphogluconate dehydratase complement(1932793..1934604) Escherichia coli str. K-12 substr. MG1655 946362 b1852 CDS zwf NC_000913.3 1934839 1936314 R glucose-6-phosphate 1-dehydrogenase complement(1934839..1936314) Escherichia coli str. K-12 substr. MG1655 946370 b1853 CDS yebK NC_000913.3 1936652 1937521 D putative DNA-binding transcriptional regulator 1936652..1937521 Escherichia coli str. K-12 substr. MG1655 946373 b1854 CDS pykA NC_000913.3 1937649 1939091 D pyruvate kinase II, glucose stimulated; pyruvate kinase II 1937649..1939091 Escherichia coli str. K-12 substr. MG1655 946527 b1855 CDS lpxM NC_000913.3 1939222 1940193 R suppressor of htrB, heat shock protein; myristoyl-acyl carrier protein (ACP)-dependent acyltransferase complement(1939222..1940193) Escherichia coli str. K-12 substr. MG1655 945143 b1856 CDS mepM NC_000913.3 1940313 1941635 R murein DD-endopeptidase, space-maker hydrolase, septation protein complement(1940313..1941635) Escherichia coli str. K-12 substr. MG1655 946376 b1857 CDS znuA NC_000913.3 1941651 1942583 R zinc ABC transporter periplasmic binding protein complement(1941651..1942583) Escherichia coli str. K-12 substr. MG1655 946375 b1858 CDS znuC NC_000913.3 1942662 1943417 D zinc ABC transporter ATPase 1942662..1943417 Escherichia coli str. K-12 substr. MG1655 946374 b1859 CDS znuB NC_000913.3 1943414 1944199 D zinc ABC transporter permease 1943414..1944199 Escherichia coli str. K-12 substr. MG1655 946372 b1860 CDS ruvB NC_000913.3 1944346 1945356 R Holliday junction helicase subunit A; branch migration; repair; ATP-dependent DNA helicase, component of RuvABC resolvasome complement(1944346..1945356) Escherichia coli str. K-12 substr. MG1655 946371 b1861 CDS ruvA NC_000913.3 1945365 1945976 R Holliday junction helicase subunit B; branch migration; repair; component of RuvABC resolvasome, regulatory subunit complement(1945365..1945976) Escherichia coli str. K-12 substr. MG1655 946369 b4677 CDS yobI NC_000913.3 1946115 1946180 R uncharacterized protein complement(1946115..1946180) Escherichia coli str. K-12 substr. MG1655 7751641 b1862 CDS yebB NC_000913.3 1946251 1946853 D DUF830 family protein 1946251..1946853 Escherichia coli str. K-12 substr. MG1655 946377 b1863 CDS ruvC NC_000913.3 1946855 1947376 R Holliday junction nuclease; resolution of structures; repair; component of RuvABC resolvasome, endonuclease complement(1946855..1947376) Escherichia coli str. K-12 substr. MG1655 946378 b1864 CDS yebC NC_000913.3 1947411 1948151 R UPF0082 family protein complement(1947411..1948151) Escherichia coli str. K-12 substr. MG1655 946379 b1865 CDS nudB NC_000913.3 1948180 1948632 R dihydroneopterin triphosphate pyrophosphatase complement(1948180..1948632) Escherichia coli str. K-12 substr. MG1655 946383 b1866 CDS aspS NC_000913.3 1948750 1950522 R aspartate tRNA synthetase; aspartyl-tRNA synthetase complement(1948750..1950522) Escherichia coli str. K-12 substr. MG1655 946385 b1867 CDS yecD NC_000913.3 1950832 1951398 D isochorismatase family protein 1950832..1951398 Escherichia coli str. K-12 substr. MG1655 946384 b1868 CDS yecE NC_000913.3 1951395 1952213 D UPF0759 family protein 1951395..1952213 Escherichia coli str. K-12 substr. MG1655 946382 b1869 CDS yecN NC_000913.3 1952266 1952661 D MAPEG family inner membrane protein 1952266..1952661 Escherichia coli str. K-12 substr. MG1655 946381 b1870 CDS cmoA NC_000913.3 1952702 1953445 D carboxy-SAM synthase 1952702..1953445 Escherichia coli str. K-12 substr. MG1655 946380 b1871 CDS cmoB NC_000913.3 1953442 1954413 D putative enzyme; tRNA (cmo5U34)-carboxymethyltransferase, carboxy-SAM-dependent 1953442..1954413 Escherichia coli str. K-12 substr. MG1655 946387 b1872 CDS torZ NC_000913.3 1954578 1957007 R trimethylamine N-oxide reductase system III, catalytic subunit complement(1954578..1957007) Escherichia coli str. K-12 substr. MG1655 946389 b1873 CDS torY NC_000913.3 1957032 1958132 R TMAO reductase III (TorYZ), cytochrome c-type subunit complement(1957032..1958132) Escherichia coli str. K-12 substr. MG1655 946490 b1874 CDS cutC NC_000913.3 1958520 1959266 R copper homeostasis protein complement(1958520..1959266) Escherichia coli str. K-12 substr. MG1655 2847756 b1875 CDS yecM NC_000913.3 1959280 1959846 R putative metal-binding enzyme complement(1959280..1959846) Escherichia coli str. K-12 substr. MG1655 946415 b1876 CDS argS NC_000913.3 1960062 1961795 D arginine tRNA synthetase; arginyl-tRNA synthetase 1960062..1961795 Escherichia coli str. K-12 substr. MG1655 946452 b1877 CDS yecT NC_000913.3 1961972 1962460 D uncharacterized protein 1961972..1962460 Escherichia coli str. K-12 substr. MG1655 946511 b1878 CDS flhE NC_000913.3 1962580 1962972 R flagellar protein; proton seal during flagellar secretion complement(1962580..1962972) Escherichia coli str. K-12 substr. MG1655 946094 b1879 CDS flhA NC_000913.3 1962972 1965050 R flagellar biosynthesis; possible export of flagellar proteins; putative flagellar export pore protein complement(1962972..1965050) Escherichia coli str. K-12 substr. MG1655 946390 b1880 CDS flhB NC_000913.3 1965043 1966191 R putative part of export apparatus for flagellar proteins; flagellin export apparatus, substrate specificity protein complement(1965043..1966191) Escherichia coli str. K-12 substr. MG1655 946391 b1881 CDS cheZ NC_000913.3 1966393 1967037 R chemotactic response; CheY protein phophatase; antagonist of CheY as switch regulator; chemotaxis regulator, protein phosphatase for CheY complement(1966393..1967037) Escherichia coli str. K-12 substr. MG1655 946392 b1882 CDS cheY NC_000913.3 1967048 1967437 R chemotaxis regulator transmits chemoreceptor signals to flagelllar motor components; chemotaxis regulator transmitting signal to flagellar motor component complement(1967048..1967437) Escherichia coli str. K-12 substr. MG1655 946393 b1883 CDS cheB NC_000913.3 1967452 1968501 R response regulator for chemotaxis (cheA sensor); protein methylesterase; fused chemotaxis regulator: protein-glutamate methylesterase in two-component regulatory system with CheA complement(1967452..1968501) Escherichia coli str. K-12 substr. MG1655 946394 b1884 CDS cheR NC_000913.3 1968504 1969364 R response regulator for chemotaxis; protein glutamate methyltransferase; chemotaxis regulator, protein-glutamate methyltransferase complement(1968504..1969364) Escherichia coli str. K-12 substr. MG1655 946396 b1885 CDS tap NC_000913.3 1969383 1970984 R methyl-accepting chemotaxis protein IV, peptide sensor receptor; methyl-accepting protein IV complement(1969383..1970984) Escherichia coli str. K-12 substr. MG1655 946397 b1886 CDS tar NC_000913.3 1971030 1972691 R methyl-accepting chemotaxis protein II, aspartate sensor receptor; methyl-accepting chemotaxis protein II complement(1971030..1972691) Escherichia coli str. K-12 substr. MG1655 946399 b1887 CDS cheW NC_000913.3 1972836 1973339 R positive regulator of CheA protein activity; purine-binding chemotaxis protein complement(1972836..1973339) Escherichia coli str. K-12 substr. MG1655 946400 b1888 CDS cheA NC_000913.3 1973360 1975324 R sensory transducer kinase between chemo- signal receptors and CheB and CheY; fused chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY: sensory histidine kinase/signal sensing protein complement(1973360..1975324) Escherichia coli str. K-12 substr. MG1655 946401 b1889 CDS motB NC_000913.3 1975329 1976255 R enables flagellar motor rotation, linking torque machinery to cell wall; protein that enables flagellar motor rotation complement(1975329..1976255) Escherichia coli str. K-12 substr. MG1655 946402 b1890 CDS motA NC_000913.3 1976252 1977139 R proton conductor component of motor; no effect on switching; proton conductor component of flagella motor complement(1976252..1977139) Escherichia coli str. K-12 substr. MG1655 947564 b1891 CDS flhC NC_000913.3 1977266 1977844 R regulator of flagellar biosynthesis acting on class 2 operons; transcription initiation factor?; flagellar class II regulon transcriptional activator, with FlhD complement(1977266..1977844) Escherichia coli str. K-12 substr. MG1655 947280 b1892 CDS flhD NC_000913.3 1977847 1978197 R regulator of flagellar biosynthesis, acting on class 2 operons; transcriptional initiation factor?; flagellar class II regulon transcriptional activator, with FlhC complement(1977847..1978197) Escherichia coli str. K-12 substr. MG1655 945442 b1893 CDS insB1 NC_000913.3 1978518 1979021 R IS1 transposase B complement(1978518..1979021) Escherichia coli str. K-12 substr. MG1655 945867 b1894 CDS insA NC_000913.3 1978940 1979215 R IS1 repressor TnpA complement(1978940..1979215) Escherichia coli str. K-12 substr. MG1655 945800 b1895 CDS uspC NC_000913.3 1979753 1980181 D putative regulator; universal stress protein 1979753..1980181 Escherichia coli str. K-12 substr. MG1655 946404 b1896 CDS otsA NC_000913.3 1980188 1981612 R trehalose-6-phosphate synthase complement(1980188..1981612) Escherichia coli str. K-12 substr. MG1655 946405 b1897 CDS otsB NC_000913.3 1981587 1982387 R trehalose-6-phosphate phophatase, biosynthetic; trehalose-6-phosphate phosphatase, biosynthetic complement(1981587..1982387) Escherichia coli str. K-12 substr. MG1655 946406 b4460 CDS araH NC_000913.3 1982554 1983540 R high-affinity L-arabinose transport protein (ABC superfamily, membrane); L-arabinose ABC transporter permease complement(1982554..1983540) Escherichia coli str. K-12 substr. MG1655 948923 b1900 CDS araG NC_000913.3 1983555 1985069 R ATP-binding component of high-affinity L-arabinose transport system; L-arabinose ABC transporter ATPase complement(1983555..1985069) Escherichia coli str. K-12 substr. MG1655 946408 b1901 CDS araF NC_000913.3 1985139 1986128 R L-arabinose-binding periplasmic protein; periplasmic-binding component of ABC superfamily; L-arabinose ABC transporter periplasmic binding protein complement(1985139..1986128) Escherichia coli str. K-12 substr. MG1655 946409 b1902 CDS ftnB NC_000913.3 1986925 1987428 D ferritin-like protein; ferritin B, putative ferrous iron reservoir 1986925..1987428 Escherichia coli str. K-12 substr. MG1655 946407 b4537 CDS yecJ NC_000913.3 1987507 1987758 R DUF2766 family protein complement(1987507..1987758) Escherichia coli str. K-12 substr. MG1655 946388 b4663 CDS azuC NC_000913.3 1987873 1987959 R acid-inducible small membrane-associated protein complement(1987873..1987959) Escherichia coli str. K-12 substr. MG1655 7751642 b1904 CDS yecR NC_000913.3 1988222 1988545 D lipoprotein, function unknown 1988222..1988545 Escherichia coli str. K-12 substr. MG1655 946386 b1905 CDS ftnA NC_000913.3 1988716 1989213 D cytoplasmic ferritin (an iron storage protein); ferritin iron storage protein (cytoplasmic) 1988716..1989213 Escherichia coli str. K-12 substr. MG1655 946410 b1906 CDS yecH NC_000913.3 1989251 1989490 R DUF2492 family protein complement(1989251..1989490) Escherichia coli str. K-12 substr. MG1655 946411 b1907 CDS tyrP NC_000913.3 1989681 1990892 D tyrosine-specific transport system; tyrosine transporter 1989681..1990892 Escherichia coli str. K-12 substr. MG1655 946412 b1908 CDS yecA NC_000913.3 1990954 1991619 R UPF0149 family protein complement(1990954..1991619) Escherichia coli str. K-12 substr. MG1655 945061 b1912 CDS pgsA NC_000913.3 1992269 1992817 R phosphatidylglycerophosphate synthetase = CDP-1,2-diacyl-sn-glycero-3-phosphate phosphatidyl transferase; phosphatidylglycerophosphate synthetase complement(1992269..1992817) Escherichia coli str. K-12 substr. MG1655 945791 b1913 CDS uvrC NC_000913.3 1992874 1994706 R excinuclease ABC, subunit C; repair of UV damage to DNA; excinuclease UvrABC, endonuclease subunit complement(1992874..1994706) Escherichia coli str. K-12 substr. MG1655 947203 b1914 CDS uvrY NC_000913.3 1994703 1995359 R putative 2-component transcriptional regulator; response regulator in two-component regulatory system with BarA complement(1994703..1995359) Escherichia coli str. K-12 substr. MG1655 946424 b1915 CDS yecF NC_000913.3 1995818 1996042 D DUF2594 family protein 1995818..1996042 Escherichia coli str. K-12 substr. MG1655 946420 b1916 CDS sdiA NC_000913.3 1996110 1996832 R transcriptional regulator of ftsQAZ gene cluster; quorum-sensing transcriptional activator complement(1996110..1996832) Escherichia coli str. K-12 substr. MG1655 946421 b1917 CDS yecC NC_000913.3 1997062 1997814 R putative ATP-binding component of a transport system; putative ABC transporter ATPase complement(1997062..1997814) Escherichia coli str. K-12 substr. MG1655 946422 b1918 CDS yecS NC_000913.3 1997811 1998479 R putative transport system permease protein (former yecC); ABC family putative inner membrane permease complement(1997811..1998479) Escherichia coli str. K-12 substr. MG1655 949105 b1919 CDS dcyD NC_000913.3 1998494 1999480 R putative 1-aminocyclopropane-1-carboxylate deaminase; D-cysteine desulfhydrase, PLP-dependent complement(1998494..1999480) Escherichia coli str. K-12 substr. MG1655 946831 b1920 CDS fliY NC_000913.3 1999585 2000385 R putative periplasmic binding transport protein; periplasmic-binding component of ABC superfamily; cystine transporter subunit complement(1999585..2000385) Escherichia coli str. K-12 substr. MG1655 948833 b1921 CDS fliZ NC_000913.3 2000473 2001024 R RpoS antagonist; putative regulator of FliA activity complement(2000473..2001024) Escherichia coli str. K-12 substr. MG1655 946833 b1922 CDS fliA NC_000913.3 2001070 2001789 R flagellar biosynthesis; alternative sigma factor 28; regulation of flagellar operons; RNA polymerase, sigma 28 (sigma F) factor complement(2001070..2001789) Escherichia coli str. K-12 substr. MG1655 948824 b1923 CDS fliC NC_000913.3 2002110 2003606 R flagellar biosynthesis; flagellin, filament structural protein; flagellar filament structural protein (flagellin) complement(2002110..2003606) Escherichia coli str. K-12 substr. MG1655 949101 b1924 CDS fliD NC_000913.3 2003872 2005278 D flagellar biosynthesis; filament capping protein; enables filament assembly; flagellar filament capping protein 2003872..2005278 Escherichia coli str. K-12 substr. MG1655 946428 b1925 CDS fliS NC_000913.3 2005303 2005713 D flagellar biosynthesis; repressor of class 3a and 3b operons (RflA activity); flagellar protein potentiates polymerization 2005303..2005713 Escherichia coli str. K-12 substr. MG1655 946429 b1926 CDS fliT NC_000913.3 2005713 2006078 D flagellar biosynthesis; repressor of class 3a and 3b operons (RflA activity); putative flagellar synthesis and assembly chaperone 2005713..2006078 Escherichia coli str. K-12 substr. MG1655 946433 b1927 CDS amyA NC_000913.3 2006156 2007643 D cytoplasmic alpha-amylase 2006156..2007643 Escherichia coli str. K-12 substr. MG1655 946434 b1928 CDS yedD NC_000913.3 2007677 2008090 R lipoprotein complement(2007677..2008090) Escherichia coli str. K-12 substr. MG1655 949082 b1929 CDS yedE NC_000913.3 2008277 2009482 D putative transport system permease protein; UPF0394 family sulphur transport domain-containing inner membrane protein 2008277..2009482 Escherichia coli str. K-12 substr. MG1655 945192 b1930 CDS yedF NC_000913.3 2009479 2009712 D putative TusA family sulfurtransferase 2009479..2009712 Escherichia coli str. K-12 substr. MG1655 946909 b1931 CDS yedK NC_000913.3 2009821 2010489 D DUF159 family protein 2009821..2010489 Escherichia coli str. K-12 substr. MG1655 946435 b1932 CDS yedL NC_000913.3 2010600 2011079 D GNAT family putative N-acetyltransferase 2010600..2011079 Escherichia coli str. K-12 substr. MG1655 946437 b4495 CDS yedN NC_000913.3 2011223 2012351 R pseudogene, IpaH/YopM family; <NA> complement(join(2011223..2011357,2011363..2012040,2012040..2012351)) Escherichia coli str. K-12 substr. MG1655 2847704 b1936 CDS intG NC_000913.3 2012502 2012663 D pseudogene, phage integrase family; <NA> 2012502..2012663 Escherichia coli str. K-12 substr. MG1655 946445 b1937 CDS fliE NC_000913.3 2012700 2013014 R flagellar biosynthesis; basal-body component, possibly at (MS-ring)-rod junction; flagellar basal-body component complement(2012700..2013014) Escherichia coli str. K-12 substr. MG1655 946446 b1938 CDS fliF NC_000913.3 2013229 2014887 D flagellar biosynthesis; basal-body MS(membrane and supramembrane)-ring and collar protein; flagellar basal-body MS-ring and collar protein 2013229..2014887 Escherichia coli str. K-12 substr. MG1655 946448 b1939 CDS fliG NC_000913.3 2014880 2015875 D flagellar biosynthesis, component of motor switching and energizing, enabling rotation and determining its direction; flagellar motor switching and energizing component 2014880..2015875 Escherichia coli str. K-12 substr. MG1655 946451 b1940 CDS fliH NC_000913.3 2015868 2016554 D flagellar biosynthesis; export of flagellar proteins?; negative regulator of FliI ATPase activity 2015868..2016554 Escherichia coli str. K-12 substr. MG1655 946456 b1941 CDS fliI NC_000913.3 2016554 2017927 D flagellum-specific ATP synthase 2016554..2017927 Escherichia coli str. K-12 substr. MG1655 946457 b1942 CDS fliJ NC_000913.3 2017946 2018389 D flagellar fliJ protein; flagellar protein 2017946..2018389 Escherichia coli str. K-12 substr. MG1655 946454 b1943 CDS fliK NC_000913.3 2018386 2019513 D flagellar hook-length control protein 2018386..2019513 Escherichia coli str. K-12 substr. MG1655 946449 b1944 CDS fliL NC_000913.3 2019618 2020082 D flagellar biosynthesis; flagellar biosynthesis protein 2019618..2020082 Escherichia coli str. K-12 substr. MG1655 946443 b1945 CDS fliM NC_000913.3 2020087 2021091 D flagellar biosynthesis, component of motor switch and energizing, enabling rotation and determining its direction; flagellar motor switching and energizing component 2020087..2021091 Escherichia coli str. K-12 substr. MG1655 946442 b1946 CDS fliN NC_000913.3 2021088 2021501 D flagellar biosynthesis, component of motor switch and energizing, enabling rotation and determining its direction; flagellar motor switching and energizing component 2021088..2021501 Escherichia coli str. K-12 substr. MG1655 946423 b1947 CDS fliO NC_000913.3 2021504 2021869 D flagellar biosynthesis; flagellar biosynthesis protein 2021504..2021869 Escherichia coli str. K-12 substr. MG1655 946458 b1948 CDS fliP NC_000913.3 2021869 2022606 D flagellar biosynthesis; flagellar biosynthesis protein 2021869..2022606 Escherichia coli str. K-12 substr. MG1655 946462 b1949 CDS fliQ NC_000913.3 2022616 2022885 D flagellar biosynthesis; flagellar biosynthesis protein 2022616..2022885 Escherichia coli str. K-12 substr. MG1655 946463 b1950 CDS fliR NC_000913.3 2022893 2023678 D flagellar biosynthesis; flagellar export pore protein 2022893..2023678 Escherichia coli str. K-12 substr. MG1655 946464 b1951 CDS rcsA NC_000913.3 2023968 2024591 D positive regulator for ctr capsule biosynthesis, positive transcription factor; transcriptional regulator of colanic acid capsular biosynthesis 2023968..2024591 Escherichia coli str. K-12 substr. MG1655 946467 b1952 CDS dsrB NC_000913.3 2024635 2024823 R uncharacterized protein complement(2024635..2024823) Escherichia coli str. K-12 substr. MG1655 946468 b1953 CDS yodD NC_000913.3 2024986 2025213 D uncharacterized protein 2024986..2025213 Escherichia coli str. K-12 substr. MG1655 946469 b1955 CDS yedP NC_000913.3 2025511 2026326 D putative mannosyl-3-phosphoglycerate phosphatase 2025511..2026326 Escherichia coli str. K-12 substr. MG1655 946472 b1956 CDS yedQ NC_000913.3 2026323 2028017 R putative membrane-anchored diguanylate cyclase complement(2026323..2028017) Escherichia coli str. K-12 substr. MG1655 946471 b1957 CDS yodC NC_000913.3 2028188 2028370 R uncharacterized protein complement(2028188..2028370) Escherichia coli str. K-12 substr. MG1655 946466 b1958 CDS yedI NC_000913.3 2028449 2029366 R DUF808 family inner membrane protein complement(2028449..2029366) Escherichia coli str. K-12 substr. MG1655 946465 b1959 CDS yedA NC_000913.3 2029539 2030459 D putative transmembrane subunit; amino acid exporter for phenylalanine, threonine 2029539..2030459 Escherichia coli str. K-12 substr. MG1655 946461 b1960 CDS vsr NC_000913.3 2030448 2030918 R DNA mismatch endonuclease, patch repair protein; DNA mismatch endonuclease of very short patch repair complement(2030448..2030918) Escherichia coli str. K-12 substr. MG1655 946476 b1961 CDS dcm NC_000913.3 2030899 2032317 R DNA cytosine methyltransferase complement(2030899..2032317) Escherichia coli str. K-12 substr. MG1655 946479 b1962 CDS yedJ NC_000913.3 2032384 2033079 R putative HD superfamily phosphohydrolase complement(2032384..2033079) Escherichia coli str. K-12 substr. MG1655 946478 b1963 CDS yedR NC_000913.3 2033119 2033484 R inner membrane protein complement(2033119..2033484) Escherichia coli str. K-12 substr. MG1655 946477 b4496 CDS yedS NC_000913.3 2034051 2035243 D pseudogene, outer membrane protein homology; putative outer membrane protein; <NA> join(2034051..2034713,2034713..2035243) Escherichia coli str. K-12 substr. MG1655 2847763 b1967 CDS hchA NC_000913.3 2035835 2036686 D glyoxalase III and Hsp31 molecular chaperone 2035835..2036686 Escherichia coli str. K-12 substr. MG1655 946481 b1968 CDS yedV NC_000913.3 2036794 2038152 R putative 2-component sensor protein; putative sensory kinase in two-component regulatory system with YedW complement(2036794..2038152) Escherichia coli str. K-12 substr. MG1655 946487 b1969 CDS yedW NC_000913.3 2038152 2038823 R putative 2-component transcriptional regulator; response regulator family protein complement(2038152..2038823) Escherichia coli str. K-12 substr. MG1655 946486 b1970 CDS hiuH NC_000913.3 2038956 2039369 D hydroxyisourate hydrolase 2038956..2039369 Escherichia coli str. K-12 substr. MG1655 946485 b1971 CDS yedY NC_000913.3 2039478 2040482 D putative reductase; membrane-anchored, periplasmic TMAO, DMSO reductase 2039478..2040482 Escherichia coli str. K-12 substr. MG1655 946484 b1972 CDS yedZ NC_000913.3 2040483 2041118 D inner membrane heme subunit for periplasmic YedYZ reductase 2040483..2041118 Escherichia coli str. K-12 substr. MG1655 946483 b1973 CDS zinT NC_000913.3 2041375 2042025 D zinc and cadmium binding protein, periplasmic 2041375..2042025 Escherichia coli str. K-12 substr. MG1655 946480 b1974 CDS yodB NC_000913.3 2042368 2042898 D cytochrome b561 homolog 1; cytochrome b561 homolog 2042368..2042898 Escherichia coli str. K-12 substr. MG1655 946491 b1976 CDS mtfA NC_000913.3 2043651 2044448 D anti-repressor for DgsA(Mlc) 2043651..2044448 Escherichia coli str. K-12 substr. MG1655 946489 b1978 CDS yeeJ NC_000913.3 2044938 2052014 D putative factor; putative adhesin 2044938..2052014 Escherichia coli str. K-12 substr. MG1655 946498 b4497 CDS yeeL NC_000913.3 2052276 2053328 R pseudogene, glycosyltransferase homology; <NA> complement(2052276..2053328) Escherichia coli str. K-12 substr. MG1655 2847764 b1981 CDS shiA NC_000913.3 2053643 2054959 D shikimate transporter 2053643..2054959 Escherichia coli str. K-12 substr. MG1655 946495 b1982 CDS amn NC_000913.3 2055061 2056515 D AMP nucleosidase 2055061..2056515 Escherichia coli str. K-12 substr. MG1655 946508 b1983 CDS yeeN NC_000913.3 2056858 2057574 D UPF0082 family protein 2056858..2057574 Escherichia coli str. K-12 substr. MG1655 946493 b1985 CDS yeeO NC_000913.3 2058203 2059690 R putative multdrug exporter, MATE family complement(2058203..2059690) Escherichia coli str. K-12 substr. MG1655 946506 b1987 CDS cbl NC_000913.3 2059964 2060914 R transcriptional regulator cys regulon; accessory regulatory circuit affecting cysM; ssuEADCB/tauABCD operon transcriptional activator complement(2059964..2060914) Escherichia coli str. K-12 substr. MG1655 946502 b1988 CDS nac NC_000913.3 2061016 2061933 R nitrogen assimilation control protein; nitrogen assimilation regulon transcriptional regulator; autorepressor complement(2061016..2061933) Escherichia coli str. K-12 substr. MG1655 946501 b1990 CDS ldtA NC_000913.3 2062391 2063323 R L,D-transpeptidase linking Lpp to murein complement(2062391..2063323) Escherichia coli str. K-12 substr. MG1655 945273 b1991 CDS cobT NC_000913.3 2063388 2064467 R nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase complement(2063388..2064467) Escherichia coli str. K-12 substr. MG1655 946517 b1992 CDS cobS NC_000913.3 2064479 2065222 R cobalamin synthase complement(2064479..2065222) Escherichia coli str. K-12 substr. MG1655 946520 b1993 CDS cobU NC_000913.3 2065219 2065764 R cobinamide kinase/cobinamide phosphate guanylyltransferase; cobinamide kinase and cobinamide phosphate guanylyltransferase complement(2065219..2065764) Escherichia coli str. K-12 substr. MG1655 946519 b4639 CDS yeeH NC_000913.3 2066068 2066154 R pseudogene; <NA> complement(2066068..2066154) Escherichia coli str. K-12 substr. MG1655 5625565 b1994 CDS insH1 NC_000913.3 2066305 2067321 R IS5 transposase and trans-activator complement(2066305..2067321) Escherichia coli str. K-12 substr. MG1655 946507 b4640 CDS yoeG NC_000913.3 2067360 2067892 R pseudogene, CP4-44 putative prophage remnant;Phage or Prophage Related; <NA> complement(join(2067360..2067458,2067458..2067892)) Escherichia coli str. K-12 substr. MG1655 5625566 b4641 CDS yoeH NC_000913.3 2068261 2068419 R pseudogene, CP4-44 putative prophage remnant;Phage or Prophage Related; <NA> complement(2068261..2068419) Escherichia coli str. K-12 substr. MG1655 5625567 b4582 CDS yoeA NC_000913.3 2068635 2070474 D CP4-44 prophage; putative disrupted hemin or colicin receptor;Phage or Prophage Related; interrupted by IS2 and C-terminal deletion; <NA> join(2068635..2068940,2070277..2070474) Escherichia coli str. K-12 substr. MG1655 4056042 b1996 CDS insD1 NC_000913.3 2068952 2069857 R IS2 transposase TnpB complement(2068952..2069857) Escherichia coli str. K-12 substr. MG1655 946403 b1997 CDS insC1 NC_000913.3 2069815 2070180 R IS2 repressor TnpA complement(2069815..2070180) Escherichia coli str. K-12 substr. MG1655 946455 b1999 CDS yeeP NC_000913.3 2070660 2071211 D pseudogene, CP4-44 prophage; 50S ribosome-binding GTPase family;Phage or Prophage Related; putative histone; <NA> 2070660..2071211 Escherichia coli str. K-12 substr. MG1655 946524 b2000 CDS flu NC_000913.3 2071539 2074658 D antigen 43, phase-variable bipartite outer membrane fluffing protein; CP4-44 prophage; antigen 43 (Ag43) phase-variable biofilm formation autotransporter 2071539..2074658 Escherichia coli str. K-12 substr. MG1655 946540 b2001 CDS yeeR NC_000913.3 2074779 2076311 D CP4-44 prophage; putative membrane protein 2074779..2076311 Escherichia coli str. K-12 substr. MG1655 946512 b2002 CDS yeeS NC_000913.3 2076308 2076754 D putative DNA repair protein, RADC family; CP4-44 prophage; putative DNA repair protein 2076308..2076754 Escherichia coli str. K-12 substr. MG1655 946514 b2003 CDS yeeT NC_000913.3 2076817 2077038 D CP4-44 prophage; uncharacterized protein 2076817..2077038 Escherichia coli str. K-12 substr. MG1655 946513 b2004 CDS cbeA NC_000913.3 2077112 2077480 D putative structural protein; CP4-44 prophage; cytoskeleton bundling-enhancing factor A; CbtA antitoxin 2077112..2077480 Escherichia coli str. K-12 substr. MG1655 946510 b2005 CDS cbtA NC_000913.3 2077569 2077943 D CP4-44 prophage; toxin of the YeeV-YeeU toxin-antitoxin system 2077569..2077943 Escherichia coli str. K-12 substr. MG1655 946534 b2006 CDS yeeW NC_000913.3 2077940 2078107 D CP4-44 prophage; uncharacterized protein;Phage or Prophage Related; <NA> 2077940..2078107 Escherichia coli str. K-12 substr. MG1655 946535 b4642 CDS yoeD NC_000913.3 2078549 2078677 R pseudogene, CP4-44 putative prophage remnant;Phage or Prophage Related; <NA> complement(2078549..2078677) Escherichia coli str. K-12 substr. MG1655 5625568 b4538 CDS yoeF NC_000913.3 2078746 2078931 D pseudogene, CP4-44 putative prophage remnant;Phage or Prophage Related; <NA> 2078746..2078931 Escherichia coli str. K-12 substr. MG1655 1450273 b2007 CDS yeeX NC_000913.3 2079032 2079361 R putative alpha helix protein; UPF0265 family protein complement(2079032..2079361) Escherichia coli str. K-12 substr. MG1655 946541 b2008 CDS yeeA NC_000913.3 2079533 2080591 R putative transporter, FUSC family inner membrane protein complement(2079533..2080591) Escherichia coli str. K-12 substr. MG1655 946545 b2009 CDS sbmC NC_000913.3 2080789 2081262 R SbmC protein; DNA gyrase inhibitor complement(2080789..2081262) Escherichia coli str. K-12 substr. MG1655 946546 b2010 CDS dacD NC_000913.3 2081381 2082547 R penicillin binding protein 6b; D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6b complement(2081381..2082547) Escherichia coli str. K-12 substr. MG1655 946518 b2011 CDS sbcB NC_000913.3 2082756 2084183 D exonuclease I, 3' --> 5' specific; deoxyribophosphodiesterase; exodeoxyribonuclease I; exonuclease I 2082756..2084183 Escherichia coli str. K-12 substr. MG1655 946529 b2012 CDS yeeD NC_000913.3 2084226 2084453 R putative TusA family sulfurtransferase complement(2084226..2084453) Escherichia coli str. K-12 substr. MG1655 946539 b2013 CDS yeeE NC_000913.3 2084467 2085525 R putative transport system permease protein; UPF0394 family inner membrane protein complement(2084467..2085525) Escherichia coli str. K-12 substr. MG1655 946526 b2014 CDS plaP NC_000913.3 2085704 2087062 R putative amino acid/amine transport protein; putrescine importer, low affinity complement(2085704..2087062) Escherichia coli str. K-12 substr. MG1655 946533 b4678 CDS yoeI NC_000913.3 2087052 2087114 R uncharacterized protein complement(2087052..2087114) Escherichia coli str. K-12 substr. MG1655 7751643 b2015 CDS yeeY NC_000913.3 2087329 2088258 R putative transcriptional regulator LYSR-type; LysR family putative transcriptional regulator complement(2087329..2088258) Escherichia coli str. K-12 substr. MG1655 946532 b2016 CDS yeeZ NC_000913.3 2088304 2089128 R putative enzyme of sugar metabolism; putative epimerase complement(2088304..2089128) Escherichia coli str. K-12 substr. MG1655 946538 b4539 CDS yoeB NC_000913.3 2089211 2089465 R toxin of the YoeB-YefM toxin-antitoxin system complement(2089211..2089465) Escherichia coli str. K-12 substr. MG1655 1450274 b2017 CDS yefM NC_000913.3 2089462 2089713 R antitoxin of the YoeB-YefM toxin-antitoxin system complement(2089462..2089713) Escherichia coli str. K-12 substr. MG1655 946542 b2018 CDS hisL NC_000913.3 2089996 2090046 D his operon leader peptide 2089996..2090046 Escherichia coli str. K-12 substr. MG1655 946547 b2019 CDS hisG NC_000913.3 2090192 2091091 D ATP phosphoribosyltransferase 2090192..2091091 Escherichia coli str. K-12 substr. MG1655 946549 b2020 CDS hisD NC_000913.3 2091097 2092401 D L-histidinal:NAD+ oxidoreductase; L-histidinol:NAD+ oxidoreductase; bifunctional histidinal dehydrogenase/ histidinol dehydrogenase 2091097..2092401 Escherichia coli str. K-12 substr. MG1655 946531 b2021 CDS hisC NC_000913.3 2092398 2093468 D histidinol-phosphate aminotransferase 2092398..2093468 Escherichia coli str. K-12 substr. MG1655 946551 b2022 CDS hisB NC_000913.3 2093468 2094535 D imidazoleglycerolphosphate dehydratase and histidinol-phosphate phosphatase; histidinol-phosphatase and imidazoleglycerol-phosphate dehydratase 2093468..2094535 Escherichia coli str. K-12 substr. MG1655 946552 b2023 CDS hisH NC_000913.3 2094535 2095125 D glutamine amidotransferase subunit of heterodimer with HisF = imidazole glycerol phosphate synthase holoenzyme; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 2094535..2095125 Escherichia coli str. K-12 substr. MG1655 946544 b2024 CDS hisA NC_000913.3 2095125 2095862 D N-(5'-phospho-L-ribosyl-formimino)-5-amino-1- (5'-phosphoribosyl)-4-imidazolecarboxamide isomerase 2095125..2095862 Escherichia coli str. K-12 substr. MG1655 946521 b2025 CDS hisF NC_000913.3 2095844 2096620 D imidazole glycerol phosphate synthase subunit in heterodimer with HisH = imidazole glycerol phsphate synthase holoenzyme; imidazole glycerol phosphate synthase, catalytic subunit with HisH 2095844..2096620 Escherichia coli str. K-12 substr. MG1655 946516 b2026 CDS hisI NC_000913.3 2096614 2097225 D phosphoribosyl-amp cyclohydrolase; phosphoribosyl-ATP pyrophosphatase; phosphoribosyl-AMP cyclohydrolase and phosphoribosyl-ATP pyrophosphatase 2096614..2097225 Escherichia coli str. K-12 substr. MG1655 946515 b2027 CDS wzzB NC_000913.3 2097321 2098301 R regulator of length of O-antigen component of lipopolysaccharide chains complement(2097321..2098301) Escherichia coli str. K-12 substr. MG1655 946553 b2028 CDS ugd NC_000913.3 2098447 2099613 R UDP-glucose 6-dehydrogenase complement(2098447..2099613) Escherichia coli str. K-12 substr. MG1655 946571 b2029 CDS gnd NC_000913.3 2099862 2101268 R 6-phosphogluconate dehydrogenase, decarboxylating complement(2099862..2101268) Escherichia coli str. K-12 substr. MG1655 946554 b4571 CDS wbbL NC_000913.3 2101396 2103389 R pseudogene, lipopolysaccharide biosynthesis protein; <NA> complement(join(2101396..2101744,2102944..2103389)) Escherichia coli str. K-12 substr. MG1655 4056030 b2030 CDS insH1 NC_000913.3 2101895 2102911 R IS5 transposase and trans-activator complement(2101895..2102911) Escherichia coli str. K-12 substr. MG1655 946577 b2032 CDS wbbK NC_000913.3 2103391 2104509 R putative glucose transferase; lipopolysaccharide biosynthesis protein complement(2103391..2104509) Escherichia coli str. K-12 substr. MG1655 946555 b2033 CDS wbbJ NC_000913.3 2104494 2105084 R putative O-acetyl transferase; putative lipopolysaccharide biosynthesis O-acetyl transferase complement(2104494..2105084) Escherichia coli str. K-12 substr. MG1655 946556 b2034 CDS wbbI NC_000913.3 2105065 2106057 R putative Galf transferase; d-Galf:alpha-d-Glc beta-1,6-galactofuranosyltransferase complement(2105065..2106057) Escherichia coli str. K-12 substr. MG1655 947041 b2035 CDS wbbH NC_000913.3 2106060 2107226 R O-antigen polymerase complement(2106060..2107226) Escherichia coli str. K-12 substr. MG1655 945179 b2036 CDS glf NC_000913.3 2107226 2108329 R UDP-galactopyranose mutase; UDP-galactopyranose mutase, FAD/NAD(P)-binding complement(2107226..2108329) Escherichia coli str. K-12 substr. MG1655 945235 b2037 CDS wzxB NC_000913.3 2108337 2109584 R putative O-antigen transporter; putative polisoprenol-linked O-antigen transporter complement(2108337..2109584) Escherichia coli str. K-12 substr. MG1655 946557 b2038 CDS rfbC NC_000913.3 2109581 2110138 R dTDP-6-deoxy-D-glucose-3,5 epimerase; dTDP-4-deoxyrhamnose-3,5-epimerase complement(2109581..2110138) Escherichia coli str. K-12 substr. MG1655 947482 b2039 CDS rfbA NC_000913.3 2110138 2111019 R dTDP-glucose pyrophosphorylase; glucose-1-phosphate thymidylyltransferase complement(2110138..2111019) Escherichia coli str. K-12 substr. MG1655 945154 b2040 CDS rfbD NC_000913.3 2111077 2111976 R dTDP-6-deoxy-L-mannose-dehydrogenase; dTDP-L-rhamnose synthase, NAD(P)-dependent dTDP-4-dehydrorhamnose reductase subunit complement(2111077..2111976) Escherichia coli str. K-12 substr. MG1655 947117 b2041 CDS rfbB NC_000913.3 2111976 2113061 R dTDP-glucose 4,6 dehydratase; dTDP-glucose 4,6 dehydratase, NAD(P)-binding complement(2111976..2113061) Escherichia coli str. K-12 substr. MG1655 945276 b2042 CDS wcaN NC_000913.3 2113434 2114327 R putative regulatory subunit for GalU complement(2113434..2114327) Escherichia coli str. K-12 substr. MG1655 946560 b2043 CDS wcaM NC_000913.3 2114502 2115896 R putative colanic acid biosynthesis protein; colanic acid biosynthesis protein complement(2114502..2115896) Escherichia coli str. K-12 substr. MG1655 946561 b2044 CDS wcaL NC_000913.3 2115907 2117127 R putative colanic acid biosynthesis glycosyl transferase; putative glycosyl transferase complement(2115907..2117127) Escherichia coli str. K-12 substr. MG1655 946565 b2045 CDS wcaK NC_000913.3 2117124 2118404 R putative galactokinase; colanic acid biosynthesis protein complement(2117124..2118404) Escherichia coli str. K-12 substr. MG1655 946569 b2046 CDS wzxC NC_000913.3 2118680 2120158 R probable export protein; putative colanic acid exporter complement(2118680..2120158) Escherichia coli str. K-12 substr. MG1655 946581 b2047 CDS wcaJ NC_000913.3 2120160 2121554 R putative UDP-glucose lipid carrier transferase; colanic biosynthesis UDP-glucose lipid carrier transferase complement(2120160..2121554) Escherichia coli str. K-12 substr. MG1655 946583 b2048 CDS cpsG NC_000913.3 2121609 2122979 R phosphomannomutase complement(2121609..2122979) Escherichia coli str. K-12 substr. MG1655 946574 b2049 CDS cpsB NC_000913.3 2123084 2124520 R mannose-1-phosphate guanyltransferase complement(2123084..2124520) Escherichia coli str. K-12 substr. MG1655 946580 b2050 CDS wcaI NC_000913.3 2124523 2125746 R putative colanic biosynthesis glycosyl transferase; putative glycosyl transferase complement(2124523..2125746) Escherichia coli str. K-12 substr. MG1655 946588 b2051 CDS wcaH NC_000913.3 2125743 2126222 R GDP-mannose mannosyl hydrolase complement(2125743..2126222) Escherichia coli str. K-12 substr. MG1655 946559 b2052 CDS wcaG NC_000913.3 2126225 2127190 R bifunctional GDP-fucose synthetase: GDP-4-dehydro-6-deoxy-D-mannose epimerase/ GDP-4-dehydro-6-L-deoxygalactose reductase complement(2126225..2127190) Escherichia coli str. K-12 substr. MG1655 946563 b2053 CDS gmd NC_000913.3 2127193 2128314 R GDP-D-mannose dehydratase, NAD(P)-binding complement(2127193..2128314) Escherichia coli str. K-12 substr. MG1655 946562 b2054 CDS wcaF NC_000913.3 2128340 2128888 R putative transferase; putative acyl transferase complement(2128340..2128888) Escherichia coli str. K-12 substr. MG1655 946578 b2055 CDS wcaE NC_000913.3 2128904 2129650 R putative colanic acid biosynthesis glycosyl transferase; putative glycosyl transferase complement(2128904..2129650) Escherichia coli str. K-12 substr. MG1655 946543 b2056 CDS wcaD NC_000913.3 2129661 2130878 R putative colanic acid polymerase complement(2129661..2130878) Escherichia coli str. K-12 substr. MG1655 946550 b2057 CDS wcaC NC_000913.3 2130853 2132070 R putative glycosyl transferase complement(2130853..2132070) Escherichia coli str. K-12 substr. MG1655 946579 b2058 CDS wcaB NC_000913.3 2132067 2132555 R putative transferase; putative acyl transferase complement(2132067..2132555) Escherichia coli str. K-12 substr. MG1655 946573 b2059 CDS wcaA NC_000913.3 2132558 2133397 R putative regulator; putative glycosyl transferase complement(2132558..2133397) Escherichia coli str. K-12 substr. MG1655 946570 b2060 CDS wzc NC_000913.3 2133490 2135652 R colanic acid production tyrosine-protein kinase; autokinase; Ugd phosphorylase complement(2133490..2135652) Escherichia coli str. K-12 substr. MG1655 946567 b2061 CDS wzb NC_000913.3 2135655 2136098 R low molecular weight protein-tyrosine-phosphatase; colanic acid production protein-tyrosine-phosphatase; Wzc-P dephosphorylase complement(2135655..2136098) Escherichia coli str. K-12 substr. MG1655 946564 b2062 CDS wza NC_000913.3 2136104 2137243 R putative polysaccharide export protein; colanic acid export protein; outer membrane auxillary lipoprotein complement(2136104..2137243) Escherichia coli str. K-12 substr. MG1655 946558 b2063 CDS yegH NC_000913.3 2137902 2139485 D putative transport protein; inner membrane protein 2137902..2139485 Escherichia coli str. K-12 substr. MG1655 946566 b2064 CDS asmA NC_000913.3 2139759 2141612 R suppressor of ompF assembly mutants; suppressor of OmpF assembly mutants; putative outer membrane protein assembly factor; inner membrane-anchored periplasmic protein complement(2139759..2141612) Escherichia coli str. K-12 substr. MG1655 946582 b2065 CDS dcd NC_000913.3 2141634 2142215 R deoxycytidine triphosphate deaminase; dCTP deaminase complement(2141634..2142215) Escherichia coli str. K-12 substr. MG1655 946593 b2066 CDS udk NC_000913.3 2142307 2142948 R uridine/cytidine kinase complement(2142307..2142948) Escherichia coli str. K-12 substr. MG1655 946597 b2067 CDS yegE NC_000913.3 2143266 2146583 D putative sensor-type protein; putative diguanylate cyclase 2143266..2146583 Escherichia coli str. K-12 substr. MG1655 946600 b2068 CDS alkA NC_000913.3 2146692 2147540 R 3-methyl-adenine DNA glycosylase II, inducible; 3-methyl-adenine DNA glycosylase II complement(2146692..2147540) Escherichia coli str. K-12 substr. MG1655 947371 b2069 CDS yegD NC_000913.3 2147674 2149026 D putative heat shock protein; Hsp70 chaperone family protein 2147674..2149026 Escherichia coli str. K-12 substr. MG1655 947234 b2070 CDS yegI NC_000913.3 2149039 2150985 R putative chaperonin; protein kinase-related putative non-specific DNA-binding protein complement(2149039..2150985) Escherichia coli str. K-12 substr. MG1655 947159 b2071 CDS yegJ NC_000913.3 2151185 2151646 D uncharacterized protein 2151185..2151646 Escherichia coli str. K-12 substr. MG1655 947201 b2072 CDS yegK NC_000913.3 2151711 2152472 R ser/thr phosphatase-related protein complement(2151711..2152472) Escherichia coli str. K-12 substr. MG1655 947269 b2073 CDS yegL NC_000913.3 2152469 2153128 R VMA domain protein complement(2152469..2153128) Escherichia coli str. K-12 substr. MG1655 946602 b4667 CDS ibsA NC_000913.3 2153349 2153408 R toxic membrane protein complement(2153349..2153408) Escherichia coli str. K-12 substr. MG1655 7751625 b4668 CDS ibsB NC_000913.3 2153681 2153737 R toxic membrane protein complement(2153681..2153737) Escherichia coli str. K-12 substr. MG1655 7751626 b2074 CDS mdtA NC_000913.3 2154016 2155263 D putative membrane protein; multidrug efflux system, subunit A 2154016..2155263 Escherichia coli str. K-12 substr. MG1655 946604 b2075 CDS mdtB NC_000913.3 2155263 2158385 D multidrug efflux system, subunit B 2155263..2158385 Escherichia coli str. K-12 substr. MG1655 946606 b2076 CDS mdtC NC_000913.3 2158386 2161463 D multidrug efflux system, subunit C 2158386..2161463 Escherichia coli str. K-12 substr. MG1655 946608 b2077 CDS iceT NC_000913.3 2161464 2162879 D putative transport protein; putative citrate/iron-citrate/zinc-citrate efflux transporter 2161464..2162879 Escherichia coli str. K-12 substr. MG1655 946601 b2078 CDS baeS NC_000913.3 2162876 2164279 D sensor protein (for BaeR); sensory histidine kinase in two-component regulatory system with BaeR 2162876..2164279 Escherichia coli str. K-12 substr. MG1655 946611 b2079 CDS baeR NC_000913.3 2164276 2164998 D transcriptional response regulatory protein (sensor BaeS); response regulator in two-component regulatory system with BaeS 2164276..2164998 Escherichia coli str. K-12 substr. MG1655 946605 b2080 CDS yegP NC_000913.3 2165189 2165521 D UPF0339 family protein 2165189..2165521 Escherichia coli str. K-12 substr. MG1655 947095 b2081 CDS yegQ NC_000913.3 2165668 2167029 D putative peptidase 2165668..2167029 Escherichia coli str. K-12 substr. MG1655 946609 b2082 CDS ogrK NC_000913.3 2167302 2167520 R prophage P2 ogr protein; orphan Ogr protein, positive regulator of P2 growth complement(2167302..2167520) Escherichia coli str. K-12 substr. MG1655 945404 b2083 CDS yegZ NC_000913.3 2167602 2167814 R pseudogene, gpD phage P2-like protein D; <NA> complement(2167602..2167814) Escherichia coli str. K-12 substr. MG1655 949050 b2085 CDS yegR NC_000913.3 2167989 2168306 R uncharacterized protein complement(2167989..2168306) Escherichia coli str. K-12 substr. MG1655 946613 b2086 CDS yegS NC_000913.3 2168712 2169611 D phosphatidylglycerol kinase, metal-dependent 2168712..2169611 Escherichia coli str. K-12 substr. MG1655 946626 b4498 CDS gatR NC_000913.3 2169693 2171727 R pseudogene, repressor for gat operon; interrupted by IS3; split galactitol utilization operon repressor, fragment 2; split galactitol utilization operon repressor, interrupted; <NA> complement(join(2169693..2170167,2171429..2171727)) Escherichia coli str. K-12 substr. MG1655 2847672 b2088 CDS insE1 NC_000913.3 2170236 2170535 D IS3 transposase A 2170236..2170535 Escherichia coli str. K-12 substr. MG1655 946616 b2089 CDS insF1 NC_000913.3 2170532 2171398 D IS3 transposase B 2170532..2171398 Escherichia coli str. K-12 substr. MG1655 946629 b2091 CDS gatD NC_000913.3 2171833 2172873 R galactitol-1-phosphate dehydrogenase; galactitol-1-phosphate dehydrogenase, Zn-dependent and NAD(P)-binding complement(2171833..2172873) Escherichia coli str. K-12 substr. MG1655 946598 b2092 CDS gatC NC_000913.3 2172921 2174278 R pseudogene, galactitol-specific enzyme IIC component of PTS;transport; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system galactitol-specific enzyme IIC; <NA> complement(join(2172921..2173362,2173365..2174278)) Escherichia coli str. K-12 substr. MG1655 946603 b2093 CDS gatB NC_000913.3 2174282 2174566 R galactitol-specific enzyme IIB of phosphotransferase system; galactitol-specific enzyme IIB component of PTS complement(2174282..2174566) Escherichia coli str. K-12 substr. MG1655 946610 b2094 CDS gatA NC_000913.3 2174597 2175049 R galactitol-specific enzyme IIA of phosphotransferase system; galactitol-specific enzyme IIA component of PTS complement(2174597..2175049) Escherichia coli str. K-12 substr. MG1655 946633 b2095 CDS gatZ NC_000913.3 2175059 2176321 R putative tagatose 6-phosphate kinase 1; D-tagatose 1,6-bisphosphate aldolase 2, subunit complement(2175059..2176321) Escherichia coli str. K-12 substr. MG1655 946641 b2096 CDS gatY NC_000913.3 2176350 2177204 R tagatose-bisphosphate aldolase 1; D-tagatose 1,6-bisphosphate aldolase 2, catalytic subunit complement(2176350..2177204) Escherichia coli str. K-12 substr. MG1655 946636 b2097 CDS fbaB NC_000913.3 2177512 2178564 R fructose-bisphosphate aldolase class I complement(2177512..2178564) Escherichia coli str. K-12 substr. MG1655 946632 b2098 CDS yegT NC_000913.3 2178821 2180098 D putative nucleoside permease protein; nucleoside transporter, low affinity 2178821..2180098 Escherichia coli str. K-12 substr. MG1655 946638 b2099 CDS yegU NC_000913.3 2180095 2181099 D ADP-ribosylglycohydrolase family protein 2180095..2181099 Escherichia coli str. K-12 substr. MG1655 946630 b2100 CDS yegV NC_000913.3 2181096 2182061 D putative kinase 2181096..2182061 Escherichia coli str. K-12 substr. MG1655 946637 b2101 CDS yegW NC_000913.3 2182035 2182781 R putative transcriptional regulator; putative DNA-binding transcriptional regulator complement(2182035..2182781) Escherichia coli str. K-12 substr. MG1655 946639 b2102 CDS yegX NC_000913.3 2182833 2183651 R putative family 25 glycosyl hydrolase complement(2182833..2183651) Escherichia coli str. K-12 substr. MG1655 945543 b2103 CDS thiD NC_000913.3 2183716 2184516 R phosphomethylpyrimidine kinase; hydroxy-methylpyrimidine kinase and hydroxy-phosphomethylpyrimidine kinase complement(2183716..2184516) Escherichia coli str. K-12 substr. MG1655 946459 b2104 CDS thiM NC_000913.3 2184513 2185301 R hydoxyethylthiazole kinase complement(2184513..2185301) Escherichia coli str. K-12 substr. MG1655 945142 b2105 CDS rcnR NC_000913.3 2185524 2185796 R transcriptional repressor of rcnA complement(2185524..2185796) Escherichia coli str. K-12 substr. MG1655 947114 b2106 CDS rcnA NC_000913.3 2185917 2186741 D membrane protein conferring nickel and cobalt resistance 2185917..2186741 Escherichia coli str. K-12 substr. MG1655 949078 b2107 CDS rcnB NC_000913.3 2186960 2187298 D periplasmic modulator of Ni and Co efflux 2186960..2187298 Escherichia coli str. K-12 substr. MG1655 949080 b2108 CDS yehA NC_000913.3 2187380 2188414 R putative type-1 fimbrial protein; putative fimbrial-like adhesin protein complement(2187380..2188414) Escherichia coli str. K-12 substr. MG1655 946642 b2109 CDS yehB NC_000913.3 2188430 2190910 R putative outer membrane protein complement(2188430..2190910) Escherichia coli str. K-12 substr. MG1655 946617 b2110 CDS yehC NC_000913.3 2190926 2191645 R putative chaperone; putative periplasmic pilin chaperone complement(2190926..2191645) Escherichia coli str. K-12 substr. MG1655 946621 b2111 CDS yehD NC_000913.3 2191680 2192222 R putative fimbrial-like protein; putative fimbrial-like adhesin protein complement(2191680..2192222) Escherichia coli str. K-12 substr. MG1655 946619 b2112 CDS yehE NC_000913.3 2192515 2192796 R DUF2574 family protein complement(2192515..2192796) Escherichia coli str. K-12 substr. MG1655 946615 b2113 CDS mrp NC_000913.3 2193059 2194168 R putative ATPase; antiporter inner membrane protein complement(2193059..2194168) Escherichia coli str. K-12 substr. MG1655 946627 b2114 CDS metG NC_000913.3 2194300 2196333 D methionine tRNA synthetase; methionyl-tRNA synthetase 2194300..2196333 Escherichia coli str. K-12 substr. MG1655 946643 b4499 CDS yehH NC_000913.3 2196474 2200269 D DUF4132 family pseudogene; defective yehI paralog; molybdate metabolism regulator, first fragment; molybdate metabolism regulator, second fragment 2; yehI' molR mutations have phenotypes and the N-terminal molR fragment of yehI' may be expressed and may have retained or evolved MolR function; <NA> join(2196474..2199320,2199322..2200269) Escherichia coli str. K-12 substr. MG1655 2847726 b2118 CDS yehI NC_000913.3 2200279 2203911 D putative regulator; DUF4132 domain-containing protein 2200279..2203911 Escherichia coli str. K-12 substr. MG1655 946649 b4541 CDS yehK NC_000913.3 2203972 2204289 D uncharacterized protein 2203972..2204289 Escherichia coli str. K-12 substr. MG1655 4056035 b2119 CDS yehL NC_000913.3 2204596 2205684 D putative hexameric AAA+ MoxR family ATPase 2204596..2205684 Escherichia coli str. K-12 substr. MG1655 946656 b2120 CDS yehM NC_000913.3 2205695 2207974 D uncharacterized protein 2205695..2207974 Escherichia coli str. K-12 substr. MG1655 946651 b2121 CDS yehP NC_000913.3 2207967 2209103 D VMA domain putative YehL ATPase stimulator 2207967..2209103 Escherichia coli str. K-12 substr. MG1655 946652 b2122 CDS yehQ NC_000913.3 2209100 2211100 D pseudogene; <NA> 2209100..2211100 Escherichia coli str. K-12 substr. MG1655 946654 b2123 CDS yehR NC_000913.3 2211225 2211686 D lipoprotein, DUF1307 family 2211225..2211686 Escherichia coli str. K-12 substr. MG1655 949023 b2124 CDS yehS NC_000913.3 2211726 2212196 R DUF1456 family protein complement(2211726..2212196) Escherichia coli str. K-12 substr. MG1655 949026 b2125 CDS yehT NC_000913.3 2212243 2212962 R putative response regulator in two-component system withYehU complement(2212243..2212962) Escherichia coli str. K-12 substr. MG1655 949024 b2126 CDS yehU NC_000913.3 2212959 2214644 R putative 2-component sensor protein; inner membrane putative sensory kinase in two-component system with YehT complement(2212959..2214644) Escherichia coli str. K-12 substr. MG1655 949027 b2127 CDS mlrA NC_000913.3 2214866 2215597 D putative transcriptional regulator; transcriptional activator of csgD and csgBA 2214866..2215597 Escherichia coli str. K-12 substr. MG1655 949029 b4542 CDS yohO NC_000913.3 2215657 2215764 D putative membrane protein 2215657..2215764 Escherichia coli str. K-12 substr. MG1655 1450279 b2128 CDS yehW NC_000913.3 2215745 2216476 R putative transport system permease protein; putative ABC transporter permease complement(2215745..2216476) Escherichia coli str. K-12 substr. MG1655 949028 b2129 CDS yehX NC_000913.3 2216481 2217407 R putative ATP-binding component of a transport system; putative ABC transporter ATPase complement(2216481..2217407) Escherichia coli str. K-12 substr. MG1655 946659 b2130 CDS yehY NC_000913.3 2217400 2218557 R putative transport system permease protein; putative ABC transporter permease complement(2217400..2218557) Escherichia coli str. K-12 substr. MG1655 946660 b2131 CDS osmF NC_000913.3 2218564 2219481 R putative transport system permease protein; putative ABC transporter periplasmic binding protein complement(2218564..2219481) Escherichia coli str. K-12 substr. MG1655 946681 b2132 CDS bglX NC_000913.3 2219692 2221989 R beta-D-glucoside glucohydrolase, periplasmic complement(2219692..2221989) Escherichia coli str. K-12 substr. MG1655 946682 b2133 CDS dld NC_000913.3 2222185 2223900 D D-lactate dehydrogenase, FAD protein, NADH independent; D-lactate dehydrogenase, FAD-binding, NADH independent 2222185..2223900 Escherichia coli str. K-12 substr. MG1655 946653 b2134 CDS pbpG NC_000913.3 2223938 2224870 R penicillin-binding protein 7; D-alanyl-D-alanine endopeptidase complement(2223938..2224870) Escherichia coli str. K-12 substr. MG1655 946662 b2135 CDS yohC NC_000913.3 2225044 2225631 R Yip1 family inner membrane protein complement(2225044..2225631) Escherichia coli str. K-12 substr. MG1655 946666 b2136 CDS yohD NC_000913.3 2225801 2226379 D DedA family inner membrane protein 2225801..2226379 Escherichia coli str. K-12 substr. MG1655 946661 b2137 CDS yohF NC_000913.3 2226509 2227270 R putative oxidoreductase complement(2226509..2227270) Escherichia coli str. K-12 substr. MG1655 949126 b2139 CDS mdtQ NC_000913.3 2227323 2228758 R pseudogene; putative channel/filament proteins; <NA> complement(join(2227323..2228609,2228609..2228758)) Escherichia coli str. K-12 substr. MG1655 949123 b4679 CDS yohP NC_000913.3 2228982 2229065 D uncharacterized protein 2228982..2229065 Escherichia coli str. K-12 substr. MG1655 7751636 b2140 CDS dusC NC_000913.3 2229438 2230385 R putative regulator protein; tRNA-dihydrouridine synthase C complement(2229438..2230385) Escherichia coli str. K-12 substr. MG1655 945458 b2141 CDS yohJ NC_000913.3 2230624 2231022 D UPF0299 family inner membrane protein 2230624..2231022 Escherichia coli str. K-12 substr. MG1655 949127 b2142 CDS yohK NC_000913.3 2231019 2231714 D putative seritonin transporter; LrgB family inner membrane protein 2231019..2231714 Escherichia coli str. K-12 substr. MG1655 949125 b2143 CDS cdd NC_000913.3 2231844 2232728 D cytidine/deoxycytidine deaminase 2231844..2232728 Escherichia coli str. K-12 substr. MG1655 946663 b2144 CDS sanA NC_000913.3 2232878 2233597 D vancomycin sensitivity; sanA mutant has a defective envelope more permeable to vancomycin at 42 degrees; DUF218 superfamily vancomycin high temperature exclusion protein 2232878..2233597 Escherichia coli str. K-12 substr. MG1655 949003 b2145 CDS yeiS NC_000913.3 2233600 2233839 D DUF2542 family protein 2233600..2233839 Escherichia coli str. K-12 substr. MG1655 948983 b2146 CDS preT NC_000913.3 2234033 2235271 D putative oxidoreductase; dihydropyrimidine dehydrogenase, NADH-dependent, subunit N 2234033..2235271 Escherichia coli str. K-12 substr. MG1655 949049 b2147 CDS preA NC_000913.3 2235265 2236500 D putative oxidoreductase; dihydropyrimidine dehydrogenase, NADH-dependent, subunit C 2235265..2236500 Escherichia coli str. K-12 substr. MG1655 949037 b2148 CDS mglC NC_000913.3 2236743 2237753 R methyl-galactoside transport and galactose taxis; membrane component of ABC superfamily; methyl-galactoside transporter subunit complement(2236743..2237753) Escherichia coli str. K-12 substr. MG1655 949039 b2149 CDS mglA NC_000913.3 2237769 2239289 R ATP-binding component of methyl-galactoside transport and galactose taxis; methyl-galactoside ABC transporter ATPase complement(2237769..2239289) Escherichia coli str. K-12 substr. MG1655 949036 b2150 CDS mglB NC_000913.3 2239350 2240348 R galactose-binding transport protein; receptor for galactose taxis; periplasmic-binding component of ABC superfamily; methyl-galactoside transporter subunit complement(2239350..2240348) Escherichia coli str. K-12 substr. MG1655 949041 b2151 CDS galS NC_000913.3 2240628 2241668 R mgl repressor, galactose operon inducer; galactose- and fucose-inducible galactose regulon transcriptional isorepressor; mgl operon transcriptional repressor; autorepressor complement(2240628..2241668) Escherichia coli str. K-12 substr. MG1655 949043 b2152 CDS yeiB NC_000913.3 2241810 2242967 R DUF418 family putative inner membrane protein complement(2241810..2242967) Escherichia coli str. K-12 substr. MG1655 949044 b2153 CDS folE NC_000913.3 2242984 2243652 R GTP cyclohydrolase I complement(2242984..2243652) Escherichia coli str. K-12 substr. MG1655 949040 b2154 CDS yeiG NC_000913.3 2243910 2244746 D putative esterase; S-formylglutathione hydrolase 2243910..2244746 Escherichia coli str. K-12 substr. MG1655 949045 b2155 CDS cirA NC_000913.3 2244778 2246769 R ferric iron outer membrane transporter, TonB-dependent; surface receptor and translocator for colicin I; colicin IA outer membrane receptor and translocator; ferric iron-catecholate transporter complement(2244778..2246769) Escherichia coli str. K-12 substr. MG1655 949042 b2156 CDS lysP NC_000913.3 2247063 2248532 R lysine-specific permease; lysine transporter complement(2247063..2248532) Escherichia coli str. K-12 substr. MG1655 946667 b2157 CDS yeiE NC_000913.3 2248737 2249618 R putative transcriptional regulator LYSR-type; putative DNA-binding transcriptional regulator complement(2248737..2249618) Escherichia coli str. K-12 substr. MG1655 946657 b2158 CDS yeiH NC_000913.3 2249717 2250766 D UPF0324 family inner membrane protein 2249717..2250766 Escherichia coli str. K-12 substr. MG1655 946668 b2159 CDS nfo NC_000913.3 2250840 2251697 D endonuclease IV; endonuclease IV with intrinsic 3'-5' exonuclease activity 2250840..2251697 Escherichia coli str. K-12 substr. MG1655 946669 b2160 CDS yeiI NC_000913.3 2251700 2252788 D putative kinase 2251700..2252788 Escherichia coli str. K-12 substr. MG1655 946640 b2161 CDS nupX NC_000913.3 2252895 2254145 R putative pyrimidine nucleoside transporter; nucleoside permease complement(2252895..2254145) Escherichia coli str. K-12 substr. MG1655 946655 b2162 CDS rihB NC_000913.3 2254245 2255186 R ribonucleoside hydrolase 2 complement(2254245..2255186) Escherichia coli str. K-12 substr. MG1655 946646 b2163 CDS yeiL NC_000913.3 2255355 2256014 D stationary phase nitrogen starvation regulator; putative transcriptional regulator 2255355..2256014 Escherichia coli str. K-12 substr. MG1655 946670 b2164 CDS psuT NC_000913.3 2256085 2257335 R putative transport system permease protein; putative nucleoside transporter complement(2256085..2257335) Escherichia coli str. K-12 substr. MG1655 946671 b2165 CDS psuG NC_000913.3 2257429 2258367 R pseudouridine 5'-phosphate glycosidase complement(2257429..2258367) Escherichia coli str. K-12 substr. MG1655 946699 b2166 CDS psuK NC_000913.3 2258355 2259296 R putative kinase; pseudouridine kinase complement(2258355..2259296) Escherichia coli str. K-12 substr. MG1655 946664 b2167 CDS fruA NC_000913.3 2259719 2261410 R PTS system, fructose-specific transport protein; fused fructose-specific PTS enzymes: IIBcomponent/IIC components complement(2259719..2261410) Escherichia coli str. K-12 substr. MG1655 946672 b2168 CDS fruK NC_000913.3 2261427 2262365 R fructose-1-phosphate kinase complement(2261427..2262365) Escherichia coli str. K-12 substr. MG1655 946676 b2169 CDS fruB NC_000913.3 2262365 2263495 R PTS system, fructose-specific IIA/fpr component; fused fructose-specific PTS enzymes: IIA component/HPr component complement(2262365..2263495) Escherichia coli str. K-12 substr. MG1655 946677 b2170 CDS setB NC_000913.3 2263863 2265044 D lactose/glucose efflux system 2263863..2265044 Escherichia coli str. K-12 substr. MG1655 946673 b4502 CDS yeiW NC_000913.3 2265041 2265295 R UPF0153 cysteine cluster protein complement(2265041..2265295) Escherichia coli str. K-12 substr. MG1655 4056031 b2171 CDS yeiP NC_000913.3 2265450 2266022 D putative elongation factor; elongation factor P-like protein 2265450..2266022 Escherichia coli str. K-12 substr. MG1655 946674 b2172 CDS yeiQ NC_000913.3 2266245 2267711 D putative oxidoreductase; putative NAD-dependent D-mannonate oxidoreductase 2266245..2267711 Escherichia coli str. K-12 substr. MG1655 946688 b2173 CDS yeiR NC_000913.3 2267829 2268815 D Zn-stimulated GTPase involved in zinc homeostasis; mutants are cadmium and EDTA sensitive; Zn(2+) binding protein 2267829..2268815 Escherichia coli str. K-12 substr. MG1655 946701 b2174 CDS lpxT NC_000913.3 2268854 2269567 D lipid A 1-diphosphate synthase; undecaprenyl pyrophosphate:lipid A 1-phosphate phosphotransferase 2268854..2269567 Escherichia coli str. K-12 substr. MG1655 946693 b2175 CDS mepS NC_000913.3 2269979 2270545 D putative lipoprotein; murein DD-endopeptidase, space-maker hydrolase, mutational suppressor of prc thermosensitivity, outer membrane lipoprotein, weak murein LD-carboxypeptidase 2269979..2270545 Escherichia coli str. K-12 substr. MG1655 946686 b2176 CDS rtn NC_000913.3 2270726 2272282 D resistance protein for phages lambda and N4, putative membrane-anchored cyclic-di-GMP phosphodiesterase 2270726..2272282 Escherichia coli str. K-12 substr. MG1655 946695 b2177 CDS yejA NC_000913.3 2272364 2274178 D periplasmic-binding component of ABC superfamily; microcin C ABC transporter periplasmic binding protein 2272364..2274178 Escherichia coli str. K-12 substr. MG1655 946675 b2178 CDS yejB NC_000913.3 2274179 2275273 D putative transport system permease protein; membrane component of ABC superfamily; microcin C ABC transporter permease 2274179..2275273 Escherichia coli str. K-12 substr. MG1655 946679 b2179 CDS yejE NC_000913.3 2275273 2276298 D putative transport system permease protein; membrane component of ABC superfamily; microcin C ABC transporter permease 2275273..2276298 Escherichia coli str. K-12 substr. MG1655 946683 b2180 CDS yejF NC_000913.3 2276300 2277889 D putative ATP-binding component of a transport system; microcin C ABC transporter ATPase 2276300..2277889 Escherichia coli str. K-12 substr. MG1655 946689 b2181 CDS yejG NC_000913.3 2277893 2278237 R uncharacterized protein complement(2277893..2278237) Escherichia coli str. K-12 substr. MG1655 945319 b2182 CDS bcr NC_000913.3 2278570 2279760 R bicyclomycin resistance protein; transmembrane protein; bicyclomycin/cysteine/sulfonamide efflux transporter complement(2278570..2279760) Escherichia coli str. K-12 substr. MG1655 944808 b2183 CDS rsuA NC_000913.3 2279788 2280483 R 16S pseudouridylate 516 synthase; 16S rRNA pseudouridine(516) synthase complement(2279788..2280483) Escherichia coli str. K-12 substr. MG1655 945378 b2184 CDS yejH NC_000913.3 2280632 2282392 D putative ATP-dependent helicase; putative ATP-dependent DNA or RNA helicase 2280632..2282392 Escherichia coli str. K-12 substr. MG1655 945529 b2185 CDS rplY NC_000913.3 2282517 2282801 D 50S ribosomal subunit protein L25 2282517..2282801 Escherichia coli str. K-12 substr. MG1655 945618 b2186 CDS yejK NC_000913.3 2282940 2283947 R protein present in spermidine nucleoids; spermidine nucleoid-associated protein complement(2282940..2283947) Escherichia coli str. K-12 substr. MG1655 946690 b2187 CDS yejL NC_000913.3 2284129 2284356 D UPF0352 family protein 2284129..2284356 Escherichia coli str. K-12 substr. MG1655 946694 b2188 CDS yejM NC_000913.3 2284376 2286136 D putative sulfatase; essential inner membrane DUF3413 domain-containing protein; lipid A production and membrane permeability factor 2284376..2286136 Escherichia coli str. K-12 substr. MG1655 946685 b2190 CDS yejO NC_000913.3 2286390 2290180 R pseudogene, autotransporter outer membrane homology;putative transport; Not classified; putative ATP-binding component of a transport system; <NA> complement(join(2286390..2288914,2290114..2290180)) Escherichia coli str. K-12 substr. MG1655 946867 b2192 CDS insH1 NC_000913.3 2289065 2290081 R IS5 transposase and trans-activator complement(2289065..2290081) Escherichia coli str. K-12 substr. MG1655 949121 b2193 CDS narP NC_000913.3 2290500 2291147 D nitrate/nitrite response regulator (sensor NarQ); response regulator in two-component regulatory system with NarQ 2290500..2291147 Escherichia coli str. K-12 substr. MG1655 949081 b2194 CDS ccmH NC_000913.3 2291358 2292410 R possible subunit of heme lyase; heme lyase, CcmH subunit complement(2291358..2292410) Escherichia coli str. K-12 substr. MG1655 946623 b2195 CDS dsbE NC_000913.3 2292407 2292964 R periplasmic thioredoxin of cytochrome c-type biogenesis complement(2292407..2292964) Escherichia coli str. K-12 substr. MG1655 949073 b2196 CDS ccmF NC_000913.3 2292961 2294904 R cytochrome c-type biogenesis protein; heme lyase, CcmF subunit complement(2292961..2294904) Escherichia coli str. K-12 substr. MG1655 948783 b2197 CDS ccmE NC_000913.3 2294901 2295380 R cytochrome c biogenesis, possible subunit of a heme lyase; periplasmic heme chaperone complement(2294901..2295380) Escherichia coli str. K-12 substr. MG1655 946697 b2198 CDS ccmD NC_000913.3 2295377 2295586 R heme exporter protein C; cytochrome c biogenesis protein; heme export ABC transporter holo-CcmE release factor complement(2295377..2295586) Escherichia coli str. K-12 substr. MG1655 946709 b2199 CDS ccmC NC_000913.3 2295583 2296320 R heme exporter protein C; membrane component of ABC superfamily; heme export ABC transporter permease; CcmE-interacting protein complement(2295583..2296320) Escherichia coli str. K-12 substr. MG1655 946703 b2200 CDS ccmB NC_000913.3 2296362 2297024 R heme exporter protein B, cytochrome c-type biogenesis protein; membrane component of ABC superfamily; heme export ABC transporter permease complement(2296362..2297024) Escherichia coli str. K-12 substr. MG1655 946692 b2201 CDS ccmA NC_000913.3 2297021 2297644 R ATP binding protein of heme exporter A; ATP-binding component of ABC superfamily; heme export ABC transporter ATPase complement(2297021..2297644) Escherichia coli str. K-12 substr. MG1655 946714 b2202 CDS napC NC_000913.3 2297657 2298259 R cytochrome c-type protein; quinol dehydrogenase, electron source for NapAB complement(2297657..2298259) Escherichia coli str. K-12 substr. MG1655 946706 b2203 CDS napB NC_000913.3 2298269 2298718 R cytochrome c-type protein; nitrate reductase, small, cytochrome C550 subunit, periplasmic complement(2298269..2298718) Escherichia coli str. K-12 substr. MG1655 946698 b2204 CDS napH NC_000913.3 2298715 2299578 R ferredoxin-type protein: electron transfer; ferredoxin-type protein complement(2298715..2299578) Escherichia coli str. K-12 substr. MG1655 945984 b2205 CDS napG NC_000913.3 2299565 2300260 R ferredoxin-type protein: electron transfer; ferredoxin-type protein complement(2299565..2300260) Escherichia coli str. K-12 substr. MG1655 945544 b2206 CDS napA NC_000913.3 2300267 2302753 R probable nitrate reductase 3; nitrate reductase, periplasmic, large subunit complement(2300267..2302753) Escherichia coli str. K-12 substr. MG1655 947093 b2207 CDS napD NC_000913.3 2302750 2303013 R assembly protein for periplasmic nitrate reductase complement(2302750..2303013) Escherichia coli str. K-12 substr. MG1655 945187 b2208 CDS napF NC_000913.3 2303003 2303497 R ferredoxin-type protein: electron transfer; ferredoxin-type protein, role in electron transfer to periplasmic nitrate reductase NapA complement(2303003..2303497) Escherichia coli str. K-12 substr. MG1655 946813 b2209 CDS eco NC_000913.3 2303905 2304393 D ecotin, a serine protease inhibitor 2303905..2304393 Escherichia coli str. K-12 substr. MG1655 946700 b2210 CDS mqo NC_000913.3 2305108 2306754 R malate dehydrogenase, FAD/NAD(P)-binding domain complement(2305108..2306754) Escherichia coli str. K-12 substr. MG1655 946702 b2211 CDS yojI NC_000913.3 2306972 2308615 R putative ATP-binding component of a transport system; microcin J25 efflux ABC transporter permease/ATPase complement(2306972..2308615) Escherichia coli str. K-12 substr. MG1655 946705 b2212 CDS alkB NC_000913.3 2308691 2309341 R DNA repair system specific for alkylated DNA; oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions complement(2308691..2309341) Escherichia coli str. K-12 substr. MG1655 946708 b2213 CDS ada NC_000913.3 2309341 2310405 R O6-methylguanine-DNA methyltransferase; transcription activator/repressor; fused DNA-binding transcriptional dual regulator/O6-methylguanine-DNA methyltransferase complement(2309341..2310405) Escherichia coli str. K-12 substr. MG1655 946710 b2214 CDS apbE NC_000913.3 2310479 2311534 R putative thiamine-synthetic flavin transferase lipoprotein complement(2310479..2311534) Escherichia coli str. K-12 substr. MG1655 946711 b2215 CDS ompC NC_000913.3 2311646 2312749 R outer membrane protein 1b (Ib;c); outer membrane porin protein C complement(2311646..2312749) Escherichia coli str. K-12 substr. MG1655 946716 b2216 CDS rcsD NC_000913.3 2313488 2316160 D putative 2-component sensor protein; phosphotransfer intermediate protein in two-component regulatory system with RcsBC 2313488..2316160 Escherichia coli str. K-12 substr. MG1655 946717 b2217 CDS rcsB NC_000913.3 2316177 2316827 D positive response regulator for colanic capsule biosynthesis, (sensor, RcsC); response regulator in two-component regulatory system with RcsC and YojN 2316177..2316827 Escherichia coli str. K-12 substr. MG1655 947441 b2218 CDS rcsC NC_000913.3 2317027 2319876 R sensor for ctr capsule biosynthesis, probable histidine kinase acting on RcsB; hybrid sensory kinase in two-component regulatory system with RcsB and YojN complement(2317027..2319876) Escherichia coli str. K-12 substr. MG1655 948993 b2219 CDS atoS NC_000913.3 2320043 2321869 D sensor protein AtoS for response regulator AtoC; sensory histidine kinase in two-component regulatory system with AtoC 2320043..2321869 Escherichia coli str. K-12 substr. MG1655 949011 b2220 CDS atoC NC_000913.3 2321866 2323251 D response regulator of ato, ornithine decarboxylase antizyme (sensor ATOS); fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein 2321866..2323251 Escherichia coli str. K-12 substr. MG1655 947444 b2221 CDS atoD NC_000913.3 2323447 2324109 D acetyl-CoA:acetoacetyl-CoA transferase alpha subunit; acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit 2323447..2324109 Escherichia coli str. K-12 substr. MG1655 947525 b2222 CDS atoA NC_000913.3 2324109 2324759 D acetyl-CoA:acetoacetyl-CoA transferase beta subunit; acetyl-CoA:acetoacetyl-CoA transferase, beta subunit 2324109..2324759 Escherichia coli str. K-12 substr. MG1655 946719 b2223 CDS atoE NC_000913.3 2324756 2326078 D short chain fatty acid transporter 2324756..2326078 Escherichia coli str. K-12 substr. MG1655 946721 b2224 CDS atoB NC_000913.3 2326109 2327293 D acetyl-CoA acetyltransferase 2326109..2327293 Escherichia coli str. K-12 substr. MG1655 946727 b2225 CDS yfaP NC_000913.3 2327367 2328143 R DUF2135 family protein, putative host defense protein complement(2327367..2328143) Escherichia coli str. K-12 substr. MG1655 946728 b2226 CDS yfaQ NC_000913.3 2328148 2329797 R tandem DUF2300 domain protein, putative host defense protein complement(2328148..2329797) Escherichia coli str. K-12 substr. MG1655 946730 b4500 CDS yfaS NC_000913.3 2329798 2334402 R pseudogene, bacterial alpha2-macroglobulin YfaS variant family; putative membrane protein; <NA> complement(2329798..2334402) Escherichia coli str. K-12 substr. MG1655 1450231 b2229 CDS yfaT NC_000913.3 2334336 2334959 R DUF1175 family protein, putative host defense protein complement(2334336..2334959) Escherichia coli str. K-12 substr. MG1655 946622 b2230 CDS yfaA NC_000913.3 2334956 2336644 R DUF2138 family protein, putative host defense protein complement(2334956..2336644) Escherichia coli str. K-12 substr. MG1655 946618 b2231 CDS gyrA NC_000913.3 2336793 2339420 R DNA gyrase, subunit A, type II topoisomerase; DNA gyrase (type II topoisomerase), subunit A complement(2336793..2339420) Escherichia coli str. K-12 substr. MG1655 946614 b2232 CDS ubiG NC_000913.3 2339567 2340289 D 3-demethylubiquinone-9 3-methyltransferase and 2-octaprenyl-6-hydroxy phenol methylase; bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase 2339567..2340289 Escherichia coli str. K-12 substr. MG1655 946607 b2233 CDS yfaL NC_000913.3 2340417 2344169 R putative ATP-binding component of a transport system; adhesin complement(2340417..2344169) Escherichia coli str. K-12 substr. MG1655 946595 b2234 CDS nrdA NC_000913.3 2344865 2347150 D ribonucleoside diphosphate reductase 1, alpha subunit, B1; ribonucleoside-diphosphate reductase 1, alpha subunit 2344865..2347150 Escherichia coli str. K-12 substr. MG1655 946612 b2235 CDS nrdB NC_000913.3 2347384 2348514 D ribonucleoside-diphosphate reductase 1, beta subunit, B2; ribonucleoside-diphosphate reductase 1, beta subunit, ferritin-like protein 2347384..2348514 Escherichia coli str. K-12 substr. MG1655 946732 b2236 CDS yfaE NC_000913.3 2348514 2348768 D ferredoxin involved with ribonucleotide reductase diferric-tyrosyl radical (Y*) cofactor maintenance 2348514..2348768 Escherichia coli str. K-12 substr. MG1655 946729 b2237 CDS inaA NC_000913.3 2348822 2349472 R pH-inducible protein involved in stress response; acid-inducible Kdo/WaaP family putative kinase complement(2348822..2349472) Escherichia coli str. K-12 substr. MG1655 946731 b2238 CDS yfaH NC_000913.3 2349651 2349893 D pseudogene; <NA> 2349651..2349893 Escherichia coli str. K-12 substr. MG1655 946718 b2239 CDS glpQ NC_000913.3 2349935 2351011 R glycerophosphodiester phosphodiesterase, periplasmic; periplasmic glycerophosphodiester phosphodiesterase complement(2349935..2351011) Escherichia coli str. K-12 substr. MG1655 946725 b2240 CDS glpT NC_000913.3 2351016 2352374 R sn-glycerol-3-phosphate permease; sn-glycerol-3-phosphate transporter complement(2351016..2352374) Escherichia coli str. K-12 substr. MG1655 946704 b2241 CDS glpA NC_000913.3 2352647 2354275 D sn-glycerol-3-phosphate dehydrogenase (anaerobic), large subunit; anaerobic sn-glycerol-3-phosphate dehydrogenase, large FAD/NAD(P)-binding subunit 2352647..2354275 Escherichia coli str. K-12 substr. MG1655 946713 b2242 CDS glpB NC_000913.3 2354265 2355524 D anaerobic sn-glycerol-3-phosphate dehydrogenase membrane anchor subunit 2354265..2355524 Escherichia coli str. K-12 substr. MG1655 946733 b2243 CDS glpC NC_000913.3 2355521 2356711 D sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit; anaerobic sn-glycerol-3-phosphate dehydrogenase, C subunit, 4Fe-4S iron-sulfur cluster 2355521..2356711 Escherichia coli str. K-12 substr. MG1655 946735 b2244 CDS yfaD NC_000913.3 2356904 2357803 D transposase_31 family protein 2356904..2357803 Escherichia coli str. K-12 substr. MG1655 946737 b4543 CDS ypaA NC_000913.3 2357804 2358001 D pseudogene, C-terminal fragment, Transposase_31 family; <NA> 2357804..2358001 Escherichia coli str. K-12 substr. MG1655 1450280 b2245 CDS rhmA NC_000913.3 2358042 2358845 R 2-keto-3-deoxy-L-rhamnonate aldolase complement(2358042..2358845) Escherichia coli str. K-12 substr. MG1655 948054 b2246 CDS rhmT NC_000913.3 2358863 2360152 R putative transport protein; putative L-rhamnonate transporter complement(2358863..2360152) Escherichia coli str. K-12 substr. MG1655 945796 b2247 CDS rhmD NC_000913.3 2360209 2361414 R putative racemase; L-rhamnonate dehydratase complement(2360209..2361414) Escherichia coli str. K-12 substr. MG1655 945881 b2248 CDS rhmR NC_000913.3 2361429 2362211 R putative regulator; putative DNA-binding transcriptional regulator for the rhm operon complement(2361429..2362211) Escherichia coli str. K-12 substr. MG1655 944752 b2249 CDS yfaY NC_000913.3 2362431 2363633 R inactive PncC family protein complement(2362431..2363633) Escherichia coli str. K-12 substr. MG1655 945478 b2250 CDS yfaZ NC_000913.3 2363733 2364275 R outer membrane protein, putative porin complement(2363733..2364275) Escherichia coli str. K-12 substr. MG1655 946739 b2251 CDS nudI NC_000913.3 2364554 2364979 D nucleoside triphosphatase 2364554..2364979 Escherichia coli str. K-12 substr. MG1655 946740 b2252 CDS ais NC_000913.3 2365018 2365620 R protein induced by aluminum; putative LPS core heptose(II)-phosphate phosphatase complement(2365018..2365620) Escherichia coli str. K-12 substr. MG1655 944945 b2253 CDS arnB NC_000913.3 2365928 2367067 D putative enzyme; uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase, PLP-dependent 2365928..2367067 Escherichia coli str. K-12 substr. MG1655 947375 b2254 CDS arnC NC_000913.3 2367071 2368039 D putative sugar transferase; undecaprenyl phosphate-L-Ara4FN transferase 2367071..2368039 Escherichia coli str. K-12 substr. MG1655 945275 b2255 CDS arnA NC_000913.3 2368039 2370021 D putative transformylase; fused UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase 2368039..2370021 Escherichia coli str. K-12 substr. MG1655 947683 b2256 CDS arnD NC_000913.3 2370018 2370908 D undecaprenyl phosphate-alpha-L-ara4FN deformylase 2370018..2370908 Escherichia coli str. K-12 substr. MG1655 945334 b2257 CDS arnT NC_000913.3 2370908 2372560 D 4-amino-4-deoxy-L-arabinose transferase (lipid A modification); 4-amino-4-deoxy-L-arabinose transferase 2370908..2372560 Escherichia coli str. K-12 substr. MG1655 947297 b4544 CDS arnE NC_000913.3 2372557 2372892 D undecaprenyl phosphate-alpha-L-ara4N exporter; flippase ArnEF subunit 2372557..2372892 Escherichia coli str. K-12 substr. MG1655 1450282 b2258 CDS arnF NC_000913.3 2372892 2373278 D putative transport/receptor protein; undecaprenyl phosphate-alpha-L-ara4N exporter; flippase ArnEF subunit 2372892..2373278 Escherichia coli str. K-12 substr. MG1655 945344 b2259 CDS pmrD NC_000913.3 2373272 2373538 R an active Salmonella PmrD ortholog blocks dephosphorylation of PmrA(BasR) by PmrB(BasS); inactive two-component system connector protein complement(2373272..2373538) Escherichia coli str. K-12 substr. MG1655 945130 b2260 CDS menE NC_000913.3 2373648 2375003 R O-succinylbenzoate-CoA ligase complement(2373648..2375003) Escherichia coli str. K-12 substr. MG1655 946741 b2261 CDS menC NC_000913.3 2375000 2375962 R o-succinylbenzoyl-CoA synthase; conversion of chorismate to 2-o-succinylbenzoyl-CoA; O-succinylbenzoyl-CoA synthase complement(2375000..2375962) Escherichia coli str. K-12 substr. MG1655 946734 b2262 CDS menB NC_000913.3 2375962 2376819 R dihydroxynaphtoic acid synthetase; dihydroxynaphthoic acid synthetase complement(2375962..2376819) Escherichia coli str. K-12 substr. MG1655 946747 b2263 CDS menH NC_000913.3 2376834 2377592 R putative enzyme; 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase complement(2376834..2377592) Escherichia coli str. K-12 substr. MG1655 946736 b2264 CDS menD NC_000913.3 2377589 2379259 R 2-oxoglutarate decarboxylase; SHCHC synthase; 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; SEPHCHC synthase complement(2377589..2379259) Escherichia coli str. K-12 substr. MG1655 946720 b2265 CDS menF NC_000913.3 2379348 2380643 R isochorismate hydroxymutase 2, menaquinone biosynthesis; isochorismate synthase 2 complement(2379348..2380643) Escherichia coli str. K-12 substr. MG1655 946712 b2266 CDS elaB NC_000913.3 2380722 2381027 R putative membrane-anchored DUF883 family ribosome-binding protein complement(2380722..2381027) Escherichia coli str. K-12 substr. MG1655 946751 b2267 CDS elaA NC_000913.3 2381082 2381543 R GNAT family putative N-acetyltransferase complement(2381082..2381543) Escherichia coli str. K-12 substr. MG1655 946750 b2268 CDS rbn NC_000913.3 2381608 2382525 D RNase BN, tRNA processing enzyme 2381608..2382525 Escherichia coli str. K-12 substr. MG1655 946760 b2269 CDS elaD NC_000913.3 2382713 2383924 D putative sulfatase / phosphatase; protease, capable of cleaving an AMC-ubiquitin model substrate 2382713..2383924 Escherichia coli str. K-12 substr. MG1655 946742 b2270 CDS yfbK NC_000913.3 2383995 2385722 R Von Willebrand factor domain putative lipoprotein complement(2383995..2385722) Escherichia coli str. K-12 substr. MG1655 946743 b2271 CDS yfbL NC_000913.3 2385860 2386831 D putative aminopeptidase; putative M28A family peptidase 2385860..2386831 Escherichia coli str. K-12 substr. MG1655 945832 b2272 CDS yfbM NC_000913.3 2386934 2387437 D DUF1877 family protein 2386934..2387437 Escherichia coli str. K-12 substr. MG1655 946745 b2273 CDS yfbN NC_000913.3 2387710 2388426 R uncharacterized protein complement(2387710..2388426) Escherichia coli str. K-12 substr. MG1655 946748 b2274 CDS yfbO NC_000913.3 2388635 2389057 D uncharacterized protein 2388635..2389057 Escherichia coli str. K-12 substr. MG1655 946752 b2275 CDS yfbP NC_000913.3 2389116 2389964 D TPR-like repeats-containing protein 2389116..2389964 Escherichia coli str. K-12 substr. MG1655 946754 b2276 CDS nuoN NC_000913.3 2390048 2391505 R NADH dehydrogenase I chain N; NADH:ubiquinone oxidoreductase, membrane subunit N complement(2390048..2391505) Escherichia coli str. K-12 substr. MG1655 945136 b2277 CDS nuoM NC_000913.3 2391512 2393041 R NADH dehydrogenase I chain M; NADH:ubiquinone oxidoreductase, membrane subunit M complement(2391512..2393041) Escherichia coli str. K-12 substr. MG1655 947731 b2278 CDS nuoL NC_000913.3 2393205 2395046 R NADH dehydrogenase I chain L; NADH:ubiquinone oxidoreductase, membrane subunit L complement(2393205..2395046) Escherichia coli str. K-12 substr. MG1655 945540 b2279 CDS nuoK NC_000913.3 2395043 2395345 R NADH dehydrogenase I chain K; NADH:ubiquinone oxidoreductase, membrane subunit K complement(2395043..2395345) Escherichia coli str. K-12 substr. MG1655 947580 b2280 CDS nuoJ NC_000913.3 2395342 2395896 R NADH dehydrogenase I chain J; NADH:ubiquinone oxidoreductase, membrane subunit J complement(2395342..2395896) Escherichia coli str. K-12 substr. MG1655 946756 b2281 CDS nuoI NC_000913.3 2395908 2396450 R NADH dehydrogenase I chain I; NADH:ubiquinone oxidoreductase, chain I complement(2395908..2396450) Escherichia coli str. K-12 substr. MG1655 946757 b2282 CDS nuoH NC_000913.3 2396465 2397442 R NADH dehydrogenase I chain H; NADH:ubiquinone oxidoreductase, membrane subunit H complement(2396465..2397442) Escherichia coli str. K-12 substr. MG1655 946761 b2283 CDS nuoG NC_000913.3 2397439 2400165 R NADH dehydrogenase I chain G; NADH:ubiquinone oxidoreductase, chain G complement(2397439..2400165) Escherichia coli str. K-12 substr. MG1655 946762 b2284 CDS nuoF NC_000913.3 2400218 2401555 R NADH dehydrogenase I chain F; NADH:ubiquinone oxidoreductase, chain F complement(2400218..2401555) Escherichia coli str. K-12 substr. MG1655 946753 b2285 CDS nuoE NC_000913.3 2401552 2402052 R NADH dehydrogenase I chain E; NADH:ubiquinone oxidoreductase, chain E complement(2401552..2402052) Escherichia coli str. K-12 substr. MG1655 946746 b2286 CDS nuoC NC_000913.3 2402055 2403845 R NADH dehydrogenase I chain C, D; NADH:ubiquinone oxidoreductase, fused CD subunit complement(2402055..2403845) Escherichia coli str. K-12 substr. MG1655 946759 b2287 CDS nuoB NC_000913.3 2403951 2404613 R NADH dehydrogenase I chain B; NADH:ubiquinone oxidoreductase, chain B complement(2403951..2404613) Escherichia coli str. K-12 substr. MG1655 946738 b2288 CDS nuoA NC_000913.3 2404629 2405072 R NADH dehydrogenase I chain A; NADH:ubiquinone oxidoreductase, membrane subunit A complement(2404629..2405072) Escherichia coli str. K-12 substr. MG1655 946764 b2289 CDS lrhA NC_000913.3 2405703 2406641 R transcriptional repressor of flagellar, motility and chemotaxis genes complement(2405703..2406641) Escherichia coli str. K-12 substr. MG1655 946769 b2290 CDS alaA NC_000913.3 2407561 2408778 D putative aminotransferase; glutamate-pyruvate aminotransferase; glutamic-pyruvic transaminase (GPT); alanine transaminase 2407561..2408778 Escherichia coli str. K-12 substr. MG1655 946772 b2291 CDS yfbR NC_000913.3 2408862 2409461 D putative alpha helix protein; 5'-nucleotidase 2408862..2409461 Escherichia coli str. K-12 substr. MG1655 946771 b2292 CDS yfbS NC_000913.3 2409520 2411352 R putative transport protein; putative transporter complement(2409520..2411352) Escherichia coli str. K-12 substr. MG1655 946766 b2293 CDS yfbT NC_000913.3 2411439 2412089 R putative phosphatase; sugar phosphatas complement(2411439..2412089) Escherichia coli str. K-12 substr. MG1655 946777 b2294 CDS yfbU NC_000913.3 2412100 2412594 R UPF0304 family protein complement(2412100..2412594) Escherichia coli str. K-12 substr. MG1655 946767 b2295 CDS yfbV NC_000913.3 2412677 2413132 R UPF0208 family inner membrane protein complement(2412677..2413132) Escherichia coli str. K-12 substr. MG1655 946774 b2296 CDS ackA NC_000913.3 2413470 2414672 D acetate kinase; acetate kinase A and propionate kinase 2 2413470..2414672 Escherichia coli str. K-12 substr. MG1655 946775 b2297 CDS pta NC_000913.3 2414747 2416891 D phosphotransacetylase; phosphate acetyltransferase 2414747..2416891 Escherichia coli str. K-12 substr. MG1655 946778 b2298 CDS yfcC NC_000913.3 2417081 2418601 D putative S-transferase; putative inner membrane transporter; C4-dicarboxylate anaerobic carrier family protein 2417081..2418601 Escherichia coli str. K-12 substr. MG1655 946780 b2299 CDS yfcD NC_000913.3 2418634 2419176 R putative regulator; putative NUDIX hydrolase complement(2418634..2419176) Escherichia coli str. K-12 substr. MG1655 946783 b2300 CDS yfcE NC_000913.3 2419234 2419788 R phosphodiesterase activity on bis-pNPP complement(2419234..2419788) Escherichia coli str. K-12 substr. MG1655 946755 b2301 CDS yfcF NC_000913.3 2419841 2420485 R glutathione S-transferase complement(2419841..2420485) Escherichia coli str. K-12 substr. MG1655 946749 b2302 CDS yfcG NC_000913.3 2420621 2421268 D putative S-transferase; GSH-dependent disulfide bond oxidoreductase 2420621..2421268 Escherichia coli str. K-12 substr. MG1655 946763 b2303 CDS folX NC_000913.3 2421325 2421687 D D-erythro-7,8-dihydroneopterin tri P epimerase; D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase and dihydroneopterin aldolase 2421325..2421687 Escherichia coli str. K-12 substr. MG1655 946781 b2304 CDS yfcH NC_000913.3 2421708 2422601 D putative sugar nucleotide epimerase; putative NAD-dependent nucleotide-sugar epimerase 2421708..2422601 Escherichia coli str. K-12 substr. MG1655 946784 b2305 CDS yfcI NC_000913.3 2422649 2423539 R transposase_31 family protein complement(2422649..2423539) Escherichia coli str. K-12 substr. MG1655 946787 b2306 CDS hisP NC_000913.3 2423736 2424509 R ATP-binding component of histidine transport; histidine ABC transporter ATPase complement(2423736..2424509) Escherichia coli str. K-12 substr. MG1655 946789 b2307 CDS hisM NC_000913.3 2424517 2425233 R histidine transport, membrane protein M; membrane component of ABC superfamily; histidine ABC transporter permease complement(2424517..2425233) Escherichia coli str. K-12 substr. MG1655 946790 b2308 CDS hisQ NC_000913.3 2425230 2425916 R histidine transport system permease protein; membrane component of ABC superfamily; histidine ABC transporter permease complement(2425230..2425916) Escherichia coli str. K-12 substr. MG1655 947235 b2309 CDS hisJ NC_000913.3 2426006 2426788 R histidine-binding periplasmic protein of high-affinity histidine transport system; periplasmic-binding component of ABC superfamily; histidine ABC transporter periplasmic binding protein complement(2426006..2426788) Escherichia coli str. K-12 substr. MG1655 945309 b2310 CDS argT NC_000913.3 2427009 2427791 R lysine-, arginine-, ornithine-binding periplasmic protein; periplasmic-binding component of ABC superfamily; lysine/arginine/ornithine transporter subunit complement(2427009..2427791) Escherichia coli str. K-12 substr. MG1655 949030 b2311 CDS ubiX NC_000913.3 2428057 2428626 R 3-octaprenyl-4-hydroxybenzoate carboxy-lyase complement(2428057..2428626) Escherichia coli str. K-12 substr. MG1655 949033 b2312 CDS purF NC_000913.3 2428721 2430238 R amidophosphoribosyltransferase = PRPP amidotransferase; amidophosphoribosyltransferase complement(2428721..2430238) Escherichia coli str. K-12 substr. MG1655 946794 b2313 CDS cvpA NC_000913.3 2430275 2430763 R colicin V production protein complement(2430275..2430763) Escherichia coli str. K-12 substr. MG1655 945055 b2314 CDS dedD NC_000913.3 2431022 2431684 R putative lipoprotein; membrane-anchored periplasmic protein involved in septation complement(2431022..2431684) Escherichia coli str. K-12 substr. MG1655 944971 b2315 CDS folC NC_000913.3 2431674 2432942 R dihydrofolate:folylpolyglutamate synthetase; dihydrofolate synthetase; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase complement(2431674..2432942) Escherichia coli str. K-12 substr. MG1655 945451 b2316 CDS accD NC_000913.3 2433012 2433926 R acetylCoA carboxylase, carboxytransferase component, beta subunit; acetyl-CoA carboxylase, beta (carboxyltransferase) subunit complement(2433012..2433926) Escherichia coli str. K-12 substr. MG1655 946796 b2317 CDS dedA NC_000913.3 2434082 2434741 R DedA family inner membrane protein complement(2434082..2434741) Escherichia coli str. K-12 substr. MG1655 946798 b2318 CDS truA NC_000913.3 2434824 2435636 R tRNA pseudouridine(38-40) synthase complement(2434824..2435636) Escherichia coli str. K-12 substr. MG1655 946793 b2319 CDS usg NC_000913.3 2435636 2436649 R putative PTS system enzyme II A component; putative semialdehyde dehydrogenase complement(2435636..2436649) Escherichia coli str. K-12 substr. MG1655 946797 b2320 CDS pdxB NC_000913.3 2436715 2437851 R erythronate-4-phosphate dehyrogenase; erythronate-4-phosphate dehydrogenase complement(2436715..2437851) Escherichia coli str. K-12 substr. MG1655 946785 b2321 CDS flk NC_000913.3 2437950 2438945 D flagellar assembly protein; putative flagella assembly protein 2437950..2438945 Escherichia coli str. K-12 substr. MG1655 946776 b2322 CDS yfcJ NC_000913.3 2438942 2440120 R putative transport protein; putative arabinose efflux transporter complement(2438942..2440120) Escherichia coli str. K-12 substr. MG1655 946791 b2323 CDS fabB NC_000913.3 2440385 2441605 R 3-oxoacyl-[acyl-carrier-protein] synthase I complement(2440385..2441605) Escherichia coli str. K-12 substr. MG1655 946799 b2324 CDS mnmC NC_000913.3 2441764 2443770 D putative peptidase; fused 5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase and FAD-dependent demodification enzyme 2441764..2443770 Escherichia coli str. K-12 substr. MG1655 946800 b2325 CDS yfcL NC_000913.3 2443891 2444169 R uncharacterized protein complement(2443891..2444169) Escherichia coli str. K-12 substr. MG1655 946804 b2326 CDS epmC NC_000913.3 2444203 2444751 R putative transporting ATPase; Elongation Factor P Lys34 hydroxylase complement(2444203..2444751) Escherichia coli str. K-12 substr. MG1655 946807 b2327 CDS yfcA NC_000913.3 2444751 2445560 R putative structural protein; TauE/TSUP family inner membrane protein complement(2444751..2445560) Escherichia coli str. K-12 substr. MG1655 946808 b2328 CDS mepA NC_000913.3 2445560 2446384 R murein DD-endopeptidase, penicillin-insensitive; murein DD-endopeptidase complement(2445560..2446384) Escherichia coli str. K-12 substr. MG1655 946812 b2329 CDS aroC NC_000913.3 2446388 2447473 R chorismate synthase complement(2446388..2447473) Escherichia coli str. K-12 substr. MG1655 946814 b2330 CDS prmB NC_000913.3 2447508 2448440 R putative adenine-specific methylase; N5-glutamine methyltransferase complement(2447508..2448440) Escherichia coli str. K-12 substr. MG1655 946805 b2331 CDS smrB NC_000913.3 2448606 2449157 D putative DNA endonuclease 2448606..2449157 Escherichia coli str. K-12 substr. MG1655 944847 b2332 CDS yfcO NC_000913.3 2449228 2450049 R DUF2544 family putative outer membrane protein complement(2449228..2450049) Escherichia coli str. K-12 substr. MG1655 946620 b2333 CDS yfcP NC_000913.3 2450051 2450590 R putative fimbrial-like protein; putative fimbrial-like adhesin protein complement(2450051..2450590) Escherichia coli str. K-12 substr. MG1655 946788 b2334 CDS yfcQ NC_000913.3 2450587 2451075 R putative fimbrial-like adhesin protein complement(2450587..2451075) Escherichia coli str. K-12 substr. MG1655 946779 b2335 CDS yfcR NC_000913.3 2451072 2451584 R putative fimbrial protein; putative fimbrial-like adhesin protein complement(2451072..2451584) Escherichia coli str. K-12 substr. MG1655 946818 b2336 CDS yfcS NC_000913.3 2451584 2452336 R putative chaperone; putative periplasmic pilin chaperone complement(2451584..2452336) Escherichia coli str. K-12 substr. MG1655 946418 b4661 CDS yfcU NC_000913.3 2452356 2455001 R pseudogene, FimD fimbrial export usher family;putative membrane; Not classified; putative outer membrane protein; <NA> complement(2452356..2455001) Escherichia coli str. K-12 substr. MG1655 1450268 b2339 CDS yfcV NC_000913.3 2455083 2455646 R putative fimbrial-like protein; putative fimbrial-like adhesin protein complement(2455083..2455646) Escherichia coli str. K-12 substr. MG1655 949109 b2340 CDS sixA NC_000913.3 2456327 2456812 R phosphohistidine phosphatase complement(2456327..2456812) Escherichia coli str. K-12 substr. MG1655 946815 b2341 CDS fadJ NC_000913.3 2457015 2459159 R putative enzyme; enoyl-CoA hydratase/epimerase and isomerase/3-hydroxyacyl-CoA dehydrogenase complement(2457015..2459159) Escherichia coli str. K-12 substr. MG1655 949097 b2342 CDS fadI NC_000913.3 2459159 2460469 R putative acyltransferase; beta-ketoacyl-CoA thiolase, anaerobic, subunit complement(2459159..2460469) Escherichia coli str. K-12 substr. MG1655 948823 b2343 CDS yfcZ NC_000913.3 2460650 2460934 R UPF0381 family protein complement(2460650..2460934) Escherichia coli str. K-12 substr. MG1655 948817 b2344 CDS fadL NC_000913.3 2461306 2462646 D long-chain fatty acid transport protein (outer membrane flp protein); long-chain fatty acid outer membrane transporter 2461306..2462646 Escherichia coli str. K-12 substr. MG1655 946820 b2345 CDS yfdF NC_000913.3 2463012 2464070 D uncharacterized protein 2463012..2464070 Escherichia coli str. K-12 substr. MG1655 946819 b2346 CDS mlaA NC_000913.3 2464252 2465007 R lipoprotein precursor; ABC transporter maintaining OM lipid asymmetry, OM lipoprotein component complement(2464252..2465007) Escherichia coli str. K-12 substr. MG1655 945582 b2347 CDS yfdC NC_000913.3 2465301 2466233 D putative transport protein; putative inner membrane protein 2465301..2466233 Escherichia coli str. K-12 substr. MG1655 944801 b2349 CDS intS NC_000913.3 2466545 2467702 D CPS-53 (KpLE1) prophage; putative prophage CPS-53 integrase 2466545..2467702 Escherichia coli str. K-12 substr. MG1655 946821 b2350 CDS gtrA NC_000913.3 2467855 2468217 D CPS-53 (KpLE1) prophage; bactoprenol-linked glucose translocase/flippase 2467855..2468217 Escherichia coli str. K-12 substr. MG1655 948821 b2351 CDS gtrB NC_000913.3 2468214 2469134 D CPS-53 (KpLE1) prophage; bactoprenol glucosyl transferase 2468214..2469134 Escherichia coli str. K-12 substr. MG1655 949098 b2352 CDS gtrS NC_000913.3 2469131 2470462 D putative ligase; serotype-specific glucosyl transferase, CPS-53 (KpLE1) prophage 2469131..2470462 Escherichia coli str. K-12 substr. MG1655 946822 b2353 CDS tfaS NC_000913.3 2470815 2471105 D pseudogene, CPS-53 (KpLE1) prophage; tail fiber assembly protein fragment;Phage or Prophage Related; <NA> 2470815..2471105 Escherichia coli str. K-12 substr. MG1655 946825 b2354 CDS yfdK NC_000913.3 2471077 2471517 R CPS-53 (KpLE1) prophage; conserved protein complement(2471077..2471517) Escherichia coli str. K-12 substr. MG1655 948822 b2355 CDS yfdL NC_000913.3 2471544 2472122 R pseudogene, CPS-53 (KpLE1) prophage;Phage or Prophage Related; <NA> complement(2471544..2472122) Escherichia coli str. K-12 substr. MG1655 949099 b2356 CDS yfdM NC_000913.3 2472118 2472387 R CPS-53 (KpLE1) prophage; putative methyltransferase;Phage or Prophage Related; <NA> complement(2472118..2472387) Escherichia coli str. K-12 substr. MG1655 945416 b2357 CDS yfdN NC_000913.3 2472387 2472881 R CPS-53 (KpLE1) prophage; uncharacterized protein complement(2472387..2472881) Escherichia coli str. K-12 substr. MG1655 946419 b2358 CDS oweS NC_000913.3 2472878 2473585 R pseudogene, CPS-53 (KpLE1) prophage; bacteriophage replication protein O family;Phage or Prophage Related; <NA> complement(2472878..2473585) Escherichia coli str. K-12 substr. MG1655 947403 b2359 CDS yfdP NC_000913.3 2473604 2473966 D CPS-53 (KpLE1) prophage; uncharacterized protein 2473604..2473966 Escherichia coli str. K-12 substr. MG1655 945565 b2360 CDS yfdQ NC_000913.3 2474032 2474856 D CPS-53 (KpLE1) prophage; uncharacterized protein 2474032..2474856 Escherichia coli str. K-12 substr. MG1655 946827 b2361 CDS yfdR NC_000913.3 2474984 2475520 D CPS-53 (KpLE1) prophage; conserved protein 2474984..2475520 Escherichia coli str. K-12 substr. MG1655 946834 b2362 CDS yfdS NC_000913.3 2475511 2475873 D CPS-53 (KpLE1) prophage; uncharacterized protein 2475511..2475873 Escherichia coli str. K-12 substr. MG1655 946426 b2363 CDS yfdT NC_000913.3 2475873 2476178 D CPS-53 (KpLE1) prophage; uncharacterized protein 2475873..2476178 Escherichia coli str. K-12 substr. MG1655 946836 b4545 CDS ypdJ NC_000913.3 2476181 2476231 D exisonase remnant; <NA> 2476181..2476231 Escherichia coli str. K-12 substr. MG1655 1450283 b4501 CDS torI NC_000913.3 2476310 2476510 D response regulator inhibitor for tor operon 2476310..2476510 Escherichia coli str. K-12 substr. MG1655 1450232 b2364 CDS dsdC NC_000913.3 2476694 2477629 R D-serine dehydratase (deaminase) transcriptional activator; dsd operon activator; autorepressor complement(2476694..2477629) Escherichia coli str. K-12 substr. MG1655 948828 b2365 CDS dsdX NC_000913.3 2477847 2479184 D D-serine transporter 2477847..2479184 Escherichia coli str. K-12 substr. MG1655 949103 b2366 CDS dsdA NC_000913.3 2479202 2480530 D D-serine dehydratase (deaminase); D-serine dehydratase 2479202..2480530 Escherichia coli str. K-12 substr. MG1655 946837 b2367 CDS emrY NC_000913.3 2480638 2482176 R multidrug resistance protein Y; putative multidrug efflux system complement(2480638..2482176) Escherichia coli str. K-12 substr. MG1655 946835 b2368 CDS emrK NC_000913.3 2482176 2483339 R multidrug resistance protein K; multidrug resistance efflux pump membrane fusion protein complement(2482176..2483339) Escherichia coli str. K-12 substr. MG1655 946840 b2369 CDS evgA NC_000913.3 2483755 2484369 D putative positive transcription regulator (sensor EvgS); response regulator in two-component regulatory system with EvgS 2483755..2484369 Escherichia coli str. K-12 substr. MG1655 946841 b2370 CDS evgS NC_000913.3 2484374 2487967 D putative sensor for regulator EvgA; hybrid sensory histidine kinase in two-component regulatory system with EvgA 2484374..2487967 Escherichia coli str. K-12 substr. MG1655 946844 b2371 CDS yfdE NC_000913.3 2488023 2489168 R putative enzyme; acetyl-CoA:oxalate CoA-transferase complement(2488023..2489168) Escherichia coli str. K-12 substr. MG1655 946432 b2372 CDS yfdV NC_000913.3 2489242 2490186 R putative receptor protein; putative transporter complement(2489242..2490186) Escherichia coli str. K-12 substr. MG1655 949110 b2373 CDS oxc NC_000913.3 2490256 2491950 R oxalyl CoA decarboxylase, ThDP-dependent complement(2490256..2491950) Escherichia coli str. K-12 substr. MG1655 946845 b2374 CDS frc NC_000913.3 2492004 2493254 R putative enzyme; formyl-CoA transferase, NAD(P)-binding complement(2492004..2493254) Escherichia coli str. K-12 substr. MG1655 946842 b2375 CDS yfdX NC_000913.3 2493767 2494402 R uncharacterized protein complement(2493767..2494402) Escherichia coli str. K-12 substr. MG1655 949108 b2376 CDS ypdI NC_000913.3 2494698 2494973 D putative lipoprotein involved in colanic acid biosynthesis 2494698..2494973 Escherichia coli str. K-12 substr. MG1655 949107 b2377 CDS yfdY NC_000913.3 2495050 2495292 R DUF2545 family putative inner membrane protein complement(2495050..2495292) Escherichia coli str. K-12 substr. MG1655 948842 b2378 CDS lpxP NC_000913.3 2495645 2496565 D putative heat shock protein; palmitoleoyl-acyl carrier protein (ACP)-dependent acyltransferase 2495645..2496565 Escherichia coli str. K-12 substr. MG1655 946847 b4680 CDS ypdK NC_000913.3 2496921 2496992 D inner membrane protein 2496921..2496992 Escherichia coli str. K-12 substr. MG1655 7751622 b2379 CDS alaC NC_000913.3 2497057 2498295 R putative aminotransferase; glutamate-pyruvate aminotransferase; glutamic-pyruvic transaminase (GPT); alanine transaminase complement(2497057..2498295) Escherichia coli str. K-12 substr. MG1655 946850 b2380 CDS ypdA NC_000913.3 2498671 2500368 D putative sensor protein; sensor kinase regulating yhjX; pyruvate-responsive YpdAB two-component system 2498671..2500368 Escherichia coli str. K-12 substr. MG1655 946723 b2381 CDS ypdB NC_000913.3 2500383 2501117 D putative 2-component transcriptional regulator; response regulator activating yhjX; pyruvate-responsive YpdAB two-component system 2500383..2501117 Escherichia coli str. K-12 substr. MG1655 947395 b2382 CDS ypdC NC_000913.3 2501130 2501987 D putative ARAC-type regulatory protein; putative DNA-binding protein 2501130..2501987 Escherichia coli str. K-12 substr. MG1655 946856 b2383 CDS fryA NC_000913.3 2501990 2504485 R putative PTS system enzyme IIA component, enzyme I; putative PTS enzyme: Hpr, enzyme I and IIA components complement(2501990..2504485) Escherichia coli str. K-12 substr. MG1655 946852 b2384 CDS ypdE NC_000913.3 2504510 2505547 R aminopeptidase complement(2504510..2505547) Escherichia coli str. K-12 substr. MG1655 946848 b2385 CDS ypdF NC_000913.3 2505547 2506632 R putative peptidase; Xaa-Pro aminopeptidase complement(2505547..2506632) Escherichia coli str. K-12 substr. MG1655 946853 b2386 CDS fryC NC_000913.3 2506647 2507894 R putative enzyme IIC component of PTS complement(2506647..2507894) Escherichia coli str. K-12 substr. MG1655 949111 b2387 CDS fryB NC_000913.3 2507916 2508242 R putative PTS system enzyme IIB component; putative enzyme IIB component of PTS complement(2507916..2508242) Escherichia coli str. K-12 substr. MG1655 949087 b2388 CDS glk NC_000913.3 2508461 2509426 R glucokinase complement(2508461..2509426) Escherichia coli str. K-12 substr. MG1655 946858 b2389 CDS yfeO NC_000913.3 2509630 2510886 D putative ion channel protein 2509630..2510886 Escherichia coli str. K-12 substr. MG1655 946854 b2390 CDS ypeC NC_000913.3 2511001 2511327 D the overlapping reading frame (b2391) is no longer thought to be an actual gene, and has been deaccessioned; DUF2502 family putative periplasmic protein 2511001..2511327 Escherichia coli str. K-12 substr. MG1655 946855 b2392 CDS mntH NC_000913.3 2511468 2512706 R manganese/divalent cation transporter complement(2511468..2512706) Escherichia coli str. K-12 substr. MG1655 946899 b2393 CDS nupC NC_000913.3 2513042 2514244 D permease of transport system for 3 nucleosides; nucleoside (except guanosine) transporter 2513042..2514244 Escherichia coli str. K-12 substr. MG1655 946895 b2394 CDS insL1 NC_000913.3 2514331 2515443 D IS186 transposase 2514331..2515443 Escherichia coli str. K-12 substr. MG1655 946896 b2395 CDS yfeA NC_000913.3 2515643 2517832 R putative diguanylate cyclase complement(2515643..2517832) Escherichia coli str. K-12 substr. MG1655 946864 b2398 CDS yfeC NC_000913.3 2518467 2518811 D DUF1323 family putative DNA-binding protein 2518467..2518811 Escherichia coli str. K-12 substr. MG1655 946857 b2399 CDS yfeD NC_000913.3 2518813 2519205 D DUF1323 family putative DNA-binding protein 2518813..2519205 Escherichia coli str. K-12 substr. MG1655 946865 b2400 CDS gltX NC_000913.3 2519257 2520672 R glutamate tRNA synthetase, catalytic subunit; glutamyl-tRNA synthetase complement(2519257..2520672) Escherichia coli str. K-12 substr. MG1655 946906 b2405 CDS xapR NC_000913.3 2521593 2522477 R regulator for xapA; transcriptional activator of xapAB complement(2521593..2522477) Escherichia coli str. K-12 substr. MG1655 946862 b2406 CDS xapB NC_000913.3 2522729 2523985 R xanthosine permease; xanthosine transporter complement(2522729..2523985) Escherichia coli str. K-12 substr. MG1655 946868 b2407 CDS xapA NC_000913.3 2524045 2524878 R xanthosine phosphorylase; purine nucleoside phosphorylase 2; nicotinamide 1-beta-D-riboside synthase complement(2524045..2524878) Escherichia coli str. K-12 substr. MG1655 946878 b2408 CDS yfeN NC_000913.3 2525127 2525891 D putative sugar hydrolase; putative outer membrane protein 2525127..2525891 Escherichia coli str. K-12 substr. MG1655 946872 b2409 CDS yfeR NC_000913.3 2525930 2526856 R putative transcriptional regulator LYSR-type; transcriptional regulator of yefH complement(2525930..2526856) Escherichia coli str. K-12 substr. MG1655 946873 b2410 CDS yfeH NC_000913.3 2526946 2527944 D putative cytochrome oxidase; putative inorganic ion transporter 2526946..2527944 Escherichia coli str. K-12 substr. MG1655 946874 b4546 CDS ypeB NC_000913.3 2527941 2528159 R DUF3820 family protein complement(2527941..2528159) Escherichia coli str. K-12 substr. MG1655 1450285 b2411 CDS ligA NC_000913.3 2528161 2530176 R DNA ligase; DNA ligase, NAD(+)-dependent complement(2528161..2530176) Escherichia coli str. K-12 substr. MG1655 946885 b2412 CDS zipA NC_000913.3 2530247 2531233 R cell division protein involved in FtsZ ring; FtsZ stabilizer complement(2530247..2531233) Escherichia coli str. K-12 substr. MG1655 946869 b2413 CDS cysZ NC_000913.3 2531463 2532224 D required for sulfate transport; sulfate transporter, sulfite inhibited 2531463..2532224 Escherichia coli str. K-12 substr. MG1655 946875 b2414 CDS cysK NC_000913.3 2532409 2533380 D cysteine synthase A, O-acetylserine sulfhydrolase A; cysteine synthase A, O-acetylserine sulfhydrolase A subunit 2532409..2533380 Escherichia coli str. K-12 substr. MG1655 946877 b2415 CDS ptsH NC_000913.3 2533764 2534021 D PTS system protein HPr; phosphohistidinoprotein-hexose phosphotransferase component of PTS system (Hpr) 2533764..2534021 Escherichia coli str. K-12 substr. MG1655 946886 b2416 CDS ptsI NC_000913.3 2534066 2535793 D PEP-protein phosphotransferase system enzyme I; PEP-protein phosphotransferase of PTS system (enzyme I) 2534066..2535793 Escherichia coli str. K-12 substr. MG1655 946879 b2417 CDS crr NC_000913.3 2535834 2536343 D PTS system, glucose-specific IIA component; glucose-specific enzyme IIA component of PTS 2535834..2536343 Escherichia coli str. K-12 substr. MG1655 946880 b2418 CDS pdxK NC_000913.3 2536386 2537237 R pyridoxal/pyridoxine/pyridoxamine kinase; pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase complement(2536386..2537237) Escherichia coli str. K-12 substr. MG1655 946881 b2419 CDS yfeK NC_000913.3 2537342 2537716 D uncharacterized protein 2537342..2537716 Escherichia coli str. K-12 substr. MG1655 946876 b2420 CDS yfeS NC_000913.3 2537749 2538483 D WGR domain protein 2537749..2538483 Escherichia coli str. K-12 substr. MG1655 946887 b2421 CDS cysM NC_000913.3 2538672 2539583 R cysteine synthase B, O-acetylserine sulfhydrolase B; cysteine synthase B (O-acetylserine sulfhydrolase B) complement(2538672..2539583) Escherichia coli str. K-12 substr. MG1655 946888 b2422 CDS cysA NC_000913.3 2539717 2540814 R ATP-binding component of sulfate permease A protein; chromate resistance; ATP-binding component of ABC superfamily; sulfate/thiosulfate transporter subunit complement(2539717..2540814) Escherichia coli str. K-12 substr. MG1655 946889 b2423 CDS cysW NC_000913.3 2540804 2541679 R sulfate transport system permease W protein; membrane component of ABC superfamily; sulfate/thiosulfate ABC transporter permease complement(2540804..2541679) Escherichia coli str. K-12 substr. MG1655 2847743 b2424 CDS cysU NC_000913.3 2541679 2542512 R sulfate, thiosulfate transport system permease T protein; membrane component of ABC superfamily; sulfate/thiosulfate ABC transporter permease complement(2541679..2542512) Escherichia coli str. K-12 substr. MG1655 946882 b2425 CDS cysP NC_000913.3 2542512 2543528 R thiosulfate binding protein; periplasmic-binding component of ABC superfamily; thiosulfate-binding protein complement(2542512..2543528) Escherichia coli str. K-12 substr. MG1655 946883 b2426 CDS ucpA NC_000913.3 2543832 2544623 R putative oxidoreductase; furfural resistance protein, putative short-chain oxidoreductase complement(2543832..2544623) Escherichia coli str. K-12 substr. MG1655 946898 b2427 CDS murR NC_000913.3 2544752 2545609 R repressor for murPQ, MurNAc 6-P inducible complement(2544752..2545609) Escherichia coli str. K-12 substr. MG1655 946568 b2428 CDS murQ NC_000913.3 2545773 2546669 D putative regulator; N-acetylmuramic acid 6-phosphate (MurNAc-6-P) etherase 2545773..2546669 Escherichia coli str. K-12 substr. MG1655 946893 b2429 CDS murP NC_000913.3 2546673 2548097 D N-acetylmuramic acid permease, EIIBC component, PTS system 2546673..2548097 Escherichia coli str. K-12 substr. MG1655 946894 b2430 CDS yfeW NC_000913.3 2548102 2549406 D putative beta-lactamase; penicillin binding protein PBP4B; weak DD-carboxypeptidase activity 2548102..2549406 Escherichia coli str. K-12 substr. MG1655 946907 b2431 CDS yfeX NC_000913.3 2549646 2550545 R porphyrinogen oxidase, cytoplasmic complement(2549646..2550545) Escherichia coli str. K-12 substr. MG1655 946913 b2432 CDS yfeY NC_000913.3 2550641 2551216 R RpoE-regulated lipoprotein complement(2550641..2551216) Escherichia coli str. K-12 substr. MG1655 946919 b2433 CDS yfeZ NC_000913.3 2551277 2551726 R inner membrane protein complement(2551277..2551726) Escherichia coli str. K-12 substr. MG1655 946918 b2434 CDS ypeA NC_000913.3 2551713 2552138 R GNAT family putative N-acetyltransferase complement(2551713..2552138) Escherichia coli str. K-12 substr. MG1655 946917 b2435 CDS amiA NC_000913.3 2552352 2553221 D N-acetylmuramoyl-l-alanine amidase I 2552352..2553221 Escherichia coli str. K-12 substr. MG1655 946916 b2436 CDS hemF NC_000913.3 2553225 2554124 D coproporphyrinogen III oxidase 2553225..2554124 Escherichia coli str. K-12 substr. MG1655 946908 b2437 CDS eutR NC_000913.3 2554130 2555182 R putative ARAC-type regulatory protein; eut operon transcriptional activator, AraC family complement(2554130..2555182) Escherichia coli str. K-12 substr. MG1655 946911 b2438 CDS eutK NC_000913.3 2555228 2555728 R putative ethanol utilization carboxysome structural protein complement(2555228..2555728) Escherichia coli str. K-12 substr. MG1655 946912 b2439 CDS eutL NC_000913.3 2555741 2556400 R putative ethanol utilization carboxysome structural protein complement(2555741..2556400) Escherichia coli str. K-12 substr. MG1655 946914 b2440 CDS eutC NC_000913.3 2556410 2557297 R ethanolamine ammonia-lyase, light chain; ethanolamine ammonia-lyase, small subunit (light chain) complement(2556410..2557297) Escherichia coli str. K-12 substr. MG1655 946925 b2441 CDS eutB NC_000913.3 2557318 2558679 R ethanolamine ammonia-lyase, heavy chain; ethanolamine ammonia-lyase, large subunit, heavy chain complement(2557318..2558679) Escherichia coli str. K-12 substr. MG1655 946924 b2442 CDS intZ NC_000913.3 2558858 2560066 D putative prophage integrase; CPZ-55 prophage; putative phage integrase 2558858..2560066 Escherichia coli str. K-12 substr. MG1655 946923 b2443 CDS yffL NC_000913.3 2560257 2560898 D CPZ-55 prophage; uncharacterized protein 2560257..2560898 Escherichia coli str. K-12 substr. MG1655 946922 b2444 CDS yffM NC_000913.3 2561368 2561613 D CPZ-55 prophage; uncharacterized protein 2561368..2561613 Escherichia coli str. K-12 substr. MG1655 946921 b2445 CDS yffN NC_000913.3 2561625 2561993 D CPZ-55 prophage; uncharacterized protein 2561625..2561993 Escherichia coli str. K-12 substr. MG1655 946930 b2446 CDS yffO NC_000913.3 2562111 2562527 D CPZ-55 prophage; uncharacterized protein 2562111..2562527 Escherichia coli str. K-12 substr. MG1655 946929 b2447 CDS yffP NC_000913.3 2562524 2563117 D CPZ-55 prophage; uncharacterized protein 2562524..2563117 Escherichia coli str. K-12 substr. MG1655 946928 b2448 CDS yffQ NC_000913.3 2563592 2563969 D CPZ-55 prophage; uncharacterized protein 2563592..2563969 Escherichia coli str. K-12 substr. MG1655 946927 b2449 CDS yffR NC_000913.3 2563980 2564372 D CPZ-55 prophage; uncharacterized protein 2563980..2564372 Escherichia coli str. K-12 substr. MG1655 946931 b2450 CDS yffS NC_000913.3 2564523 2565332 D CPZ-55 prophage; uncharacterized protein 2564523..2565332 Escherichia coli str. K-12 substr. MG1655 946932 b2451 CDS eutA NC_000913.3 2565481 2566884 R reactivating factor for ethanolamine ammonia lyase complement(2565481..2566884) Escherichia coli str. K-12 substr. MG1655 946937 b2452 CDS eutH NC_000913.3 2566881 2568107 R ethanolamine utilization; homolog of Salmonella putative transport protein; ethanolamine transporter complement(2566881..2568107) Escherichia coli str. K-12 substr. MG1655 944979 b2453 CDS eutG NC_000913.3 2568324 2569511 R ethanolamine utilization; homolog of Salmonella enzyme, similar to iron-containing alcohol dehydrogenase; ethanol dehydrogenase involved in ethanolamine utilization; aldehyde reductase complement(2568324..2569511) Escherichia coli str. K-12 substr. MG1655 946233 b2454 CDS eutJ NC_000913.3 2569501 2570337 R ethanolamine utilization; homolog of Salmonella gene; ethanolamine utilization protein, HSP70/actin superfamily protein complement(2569501..2570337) Escherichia coli str. K-12 substr. MG1655 947588 b2455 CDS eutE NC_000913.3 2570348 2571751 R ethanolamine utilization; similar to acetaldehyde dehydrogenase; aldehyde oxidoreductase, ethanolamine utilization protein complement(2570348..2571751) Escherichia coli str. K-12 substr. MG1655 946943 b2456 CDS eutN NC_000913.3 2571763 2572050 R detox protein; Ethanolamine catabolic microcompartment shell protein complement(2571763..2572050) Escherichia coli str. K-12 substr. MG1655 946945 b2457 CDS eutM NC_000913.3 2572157 2572450 R detox protein; ethanolamine utilization protein, putative carboxysome structural protein complement(2572157..2572450) Escherichia coli str. K-12 substr. MG1655 946942 b2458 CDS eutD NC_000913.3 2572489 2573505 R ethanolamine utilization; homolog of Salmonella acetyl/butyryl P transferase; phosphate acetyltransferase complement(2572489..2573505) Escherichia coli str. K-12 substr. MG1655 946940 b2459 CDS eutT NC_000913.3 2573502 2574305 R cobalamin adenosyltransferase involved in ethanolamine utilization complement(2573502..2574305) Escherichia coli str. K-12 substr. MG1655 946939 b2460 CDS eutQ NC_000913.3 2574302 2575003 R RmlC-like cupin domain protein complement(2574302..2575003) Escherichia coli str. K-12 substr. MG1655 946935 b2461 CDS eutP NC_000913.3 2574978 2575457 R putative P-loop NTPase ethanolamine utilization protein complement(2574978..2575457) Escherichia coli str. K-12 substr. MG1655 946933 b2462 CDS eutS NC_000913.3 2575470 2575805 R putative ethanol utilization carboxysome structural protein complement(2575470..2575805) Escherichia coli str. K-12 substr. MG1655 946936 b2463 CDS maeB NC_000913.3 2576098 2578377 R putative multimodular enzyme; malic enzyme: putative oxidoreductase/phosphotransacetylase complement(2576098..2578377) Escherichia coli str. K-12 substr. MG1655 946947 b2464 CDS talA NC_000913.3 2578666 2579616 D transaldolase A 2578666..2579616 Escherichia coli str. K-12 substr. MG1655 947006 b2465 CDS tktB NC_000913.3 2579636 2581639 D transketolase 2 isozyme; transketolase 2, thiamine triphosphate-binding 2579636..2581639 Escherichia coli str. K-12 substr. MG1655 945865 b2466 CDS ypfG NC_000913.3 2581734 2582777 R DUF1176 family protein complement(2581734..2582777) Escherichia coli str. K-12 substr. MG1655 946828 b2467 CDS nudK NC_000913.3 2582903 2583478 R GDP-mannose pyrophosphatase complement(2582903..2583478) Escherichia coli str. K-12 substr. MG1655 947072 b2468 CDS aegA NC_000913.3 2583546 2585525 R putative oxidoreductase, FeS binding subunit/NAD/FAD-binding subunit complement(2583546..2585525) Escherichia coli str. K-12 substr. MG1655 947383 b2469 CDS narQ NC_000913.3 2585731 2587431 D sensor for nitrate reductase system, protein histidine kinase (acts on NarP and narL); sensory histidine kinase in two-component regulatory system with NarP 2585731..2587431 Escherichia coli str. K-12 substr. MG1655 946948 b2470 CDS acrD NC_000913.3 2587595 2590708 D aminoglycoside/multidrug efflux system 2587595..2590708 Escherichia coli str. K-12 substr. MG1655 945464 b4606 CDS ypfM NC_000913.3 2590807 2590866 R stress-induced small enterobacterial protein complement(2590807..2590866) Escherichia coli str. K-12 substr. MG1655 5061513 b2471 CDS yffB NC_000913.3 2591247 2591603 D putative ArsC family reductase 2591247..2591603 Escherichia coli str. K-12 substr. MG1655 946953 b2472 CDS dapE NC_000913.3 2591607 2592734 D N-succinyl-diaminopimelate deacylase 2591607..2592734 Escherichia coli str. K-12 substr. MG1655 948313 b4547 CDS ypfN NC_000913.3 2592762 2592962 D putative membrane protein, UPF0370 family 2592762..2592962 Escherichia coli str. K-12 substr. MG1655 1450286 b2473 CDS ypfH NC_000913.3 2593072 2593770 R palmitoyl-CoA esterase activity, uncertain physiological substrate complement(2593072..2593770) Escherichia coli str. K-12 substr. MG1655 947571 b2474 CDS tmcA NC_000913.3 2593844 2595859 R elongator methionine tRNA (ac4C34) acetyltransferase complement(2593844..2595859) Escherichia coli str. K-12 substr. MG1655 946053 b2475 CDS ypfJ NC_000913.3 2595874 2596737 R putative neutral zinc metallopeptidase complement(2595874..2596737) Escherichia coli str. K-12 substr. MG1655 946956 b2476 CDS purC NC_000913.3 2596905 2597618 R phosphoribosylaminoimidazole-succinocarboxamide synthetase = SAICAR synthetase; phosphoribosylaminoimidazole-succinocarboxamide synthetase complement(2596905..2597618) Escherichia coli str. K-12 substr. MG1655 946957 b2477 CDS bamC NC_000913.3 2597831 2598865 R lipoprotein-34; BamABCDE complex OM biogenesis lipoprotein complement(2597831..2598865) Escherichia coli str. K-12 substr. MG1655 946954 b2478 CDS dapA NC_000913.3 2598882 2599760 R dihydrodipicolinate synthase complement(2598882..2599760) Escherichia coli str. K-12 substr. MG1655 946952 b2479 CDS gcvR NC_000913.3 2599906 2600478 D transcriptional regulation of gcv operon; transcriptional repressor, regulatory protein accessory to GcvA 2599906..2600478 Escherichia coli str. K-12 substr. MG1655 946950 b2480 CDS bcp NC_000913.3 2600478 2600948 D bacterioferritin comigratory protein; peroxiredoxin; thiol peroxidase, thioredoxin-dependent 2600478..2600948 Escherichia coli str. K-12 substr. MG1655 946949 b2481 CDS hyfA NC_000913.3 2601201 2601818 D hydrogenase 4 Fe-S subunit; hydrogenase 4, 4Fe-4S subunit 2601201..2601818 Escherichia coli str. K-12 substr. MG1655 946959 b2482 CDS hyfB NC_000913.3 2601818 2603836 D hydrogenase 4 membrane subunit; hydrogenase 4, membrane subunit 2601818..2603836 Escherichia coli str. K-12 substr. MG1655 946961 b2483 CDS hyfC NC_000913.3 2603847 2604794 D hydrogenase 4 membrane subunit; hydrogenase 4, membrane subunit 2603847..2604794 Escherichia coli str. K-12 substr. MG1655 947492 b2484 CDS hyfD NC_000913.3 2604811 2606250 D hydrogenase 4 membrane subunit; hydrogenase 4, membrane subunit 2604811..2606250 Escherichia coli str. K-12 substr. MG1655 947290 b2485 CDS hyfE NC_000913.3 2606262 2606912 D hydrogenase 4 membrane subunit; hydrogenase 4, membrane subunit 2606262..2606912 Escherichia coli str. K-12 substr. MG1655 945298 b2486 CDS hyfF NC_000913.3 2606917 2608497 D hydrogenase 4 membrane subunit; hydrogenase 4, membrane subunit 2606917..2608497 Escherichia coli str. K-12 substr. MG1655 946962 b2487 CDS hyfG NC_000913.3 2608487 2610154 D hydrogenase 4 subunit; hydrogenase 4, subunit 2608487..2610154 Escherichia coli str. K-12 substr. MG1655 946964 b2488 CDS hyfH NC_000913.3 2610164 2610709 D hydrogenase 4 Fe-S subunit; hydrogenase 4, Fe-S subunit 2610164..2610709 Escherichia coli str. K-12 substr. MG1655 946965 b2489 CDS hyfI NC_000913.3 2610706 2611464 D hydrogenase 4 Fe-S subunit; hydrogenase 4, Fe-S subunit 2610706..2611464 Escherichia coli str. K-12 substr. MG1655 946966 b2490 CDS hyfJ NC_000913.3 2611457 2611870 D putative processing element hydrogenase 4 2611457..2611870 Escherichia coli str. K-12 substr. MG1655 947713 b2491 CDS hyfR NC_000913.3 2611900 2613912 D putative 2-component regulator, interaction with sigma 54; hydrogenase-4 transcriptional activator 2611900..2613912 Escherichia coli str. K-12 substr. MG1655 948886 b2492 CDS focB NC_000913.3 2613934 2614782 D probable formate transporter (formate channel 2); putative formate transporter 2613934..2614782 Escherichia coli str. K-12 substr. MG1655 949032 b2493 CDS yfgO NC_000913.3 2614820 2615881 R putative permease; putative UPF0118 family inner membrane permease complement(2614820..2615881) Escherichia coli str. K-12 substr. MG1655 945894 b2494 CDS bepA NC_000913.3 2616094 2617557 D OM protein maintenance and assembly metalloprotease and chaperone, periplasmic 2616094..2617557 Escherichia coli str. K-12 substr. MG1655 947029 b2495 CDS yfgD NC_000913.3 2617578 2617937 D putative oxidoreductase 2617578..2617937 Escherichia coli str. K-12 substr. MG1655 946974 b2496 CDS hda NC_000913.3 2618075 2618776 R putative DNA replication factor; ATPase regulatory factor involved in DnaA inactivation complement(2618075..2618776) Escherichia coli str. K-12 substr. MG1655 946977 b2497 CDS uraA NC_000913.3 2618871 2620160 R uracil transport; uracil permease complement(2618871..2620160) Escherichia coli str. K-12 substr. MG1655 946978 b2498 CDS upp NC_000913.3 2620246 2620872 R uracil phosphoribosyltransferase complement(2620246..2620872) Escherichia coli str. K-12 substr. MG1655 946979 b2499 CDS purM NC_000913.3 2621197 2622234 D phosphoribosylaminoimidazole synthetase = AIR synthetase; phosphoribosylaminoimidazole synthetase 2621197..2622234 Escherichia coli str. K-12 substr. MG1655 946975 b2500 CDS purN NC_000913.3 2622234 2622872 D phosphoribosylglycinamide formyltransferase 1 2622234..2622872 Escherichia coli str. K-12 substr. MG1655 946973 b2501 CDS ppk NC_000913.3 2623044 2625110 D polyphosphate kinase; polyphosphate kinase, component of RNA degradosome 2623044..2625110 Escherichia coli str. K-12 substr. MG1655 946971 b2502 CDS ppx NC_000913.3 2625115 2626656 D exopolyphosphatase 2625115..2626656 Escherichia coli str. K-12 substr. MG1655 946970 b2503 CDS yfgF NC_000913.3 2626695 2628938 R putative cytochrome C-type biogenesis protein; cyclic-di-GMP phosphodiesterase, anaerobic complement(2626695..2628938) Escherichia coli str. K-12 substr. MG1655 946968 b2504 CDS yfgG NC_000913.3 2629290 2629481 D uncharacterized protein 2629290..2629481 Escherichia coli str. K-12 substr. MG1655 946980 b2505 CDS yfgH NC_000913.3 2629792 2630310 D putative outer membrane lipoprotein; outer membrane integrity lipoprotein 2629792..2630310 Escherichia coli str. K-12 substr. MG1655 945709 b2506 CDS yfgI NC_000913.3 2630326 2630865 D putative membrane protein; nalidixic acid resistance protein, putative periplasmic protein 2630326..2630865 Escherichia coli str. K-12 substr. MG1655 945168 b2507 CDS guaA NC_000913.3 2630958 2632535 R GMP synthetase (glutamine-hydrolyzing); GMP synthetase (glutamine aminotransferase) complement(2630958..2632535) Escherichia coli str. K-12 substr. MG1655 947334 b2508 CDS guaB NC_000913.3 2632604 2634070 R IMP dehydrogenase complement(2632604..2634070) Escherichia coli str. K-12 substr. MG1655 946985 b2509 CDS xseA NC_000913.3 2634232 2635602 D exonuclease VII, large subunit 2634232..2635602 Escherichia coli str. K-12 substr. MG1655 946988 b2510 CDS yfgJ NC_000913.3 2635599 2635814 R DUF1407 family protein complement(2635599..2635814) Escherichia coli str. K-12 substr. MG1655 946984 b2511 CDS der NC_000913.3 2635884 2637356 R putative GTP-binding factor; GTPase; multicopy suppressor of ftsJ complement(2635884..2637356) Escherichia coli str. K-12 substr. MG1655 946983 b2512 CDS bamB NC_000913.3 2637474 2638652 R putative dehydrogenase; BamABCDE complex OM biogenesis lipoprotein complement(2637474..2638652) Escherichia coli str. K-12 substr. MG1655 946982 b2513 CDS yfgM NC_000913.3 2638663 2639283 R ancillary SecYEG translocon subunit; putative anti-RcsB factor complement(2638663..2639283) Escherichia coli str. K-12 substr. MG1655 946981 b2514 CDS hisS NC_000913.3 2639301 2640575 R histidine tRNA synthetase; histidyl tRNA synthetase complement(2639301..2640575) Escherichia coli str. K-12 substr. MG1655 946989 b2515 CDS ispG NC_000913.3 2640686 2641804 R 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase complement(2640686..2641804) Escherichia coli str. K-12 substr. MG1655 946991 b2516 CDS rodZ NC_000913.3 2641831 2642844 R putative membrane protein; MreB assembly cytoskeletal protein complement(2641831..2642844) Escherichia coli str. K-12 substr. MG1655 946992 b2517 CDS rlmN NC_000913.3 2643129 2644283 R dual specificity 23S rRNA m(2)A2503, tRNA m(2)A37 methyltransferase, SAM-dependent complement(2643129..2644283) Escherichia coli str. K-12 substr. MG1655 946249 b2518 CDS ndk NC_000913.3 2644433 2644864 R nucleoside diphosphate kinase; multifunctional nucleoside diphosphate kinase and apyrimidinic endonuclease and 3'-phosphodiesterase complement(2644433..2644864) Escherichia coli str. K-12 substr. MG1655 945611 b2519 CDS pbpC NC_000913.3 2645013 2647325 R penicillin binding protein 1C (PBP 1C); penicillin-insensitive murein repair transglycosylase; inactive transpeptidase domain protein complement(2645013..2647325) Escherichia coli str. K-12 substr. MG1655 947152 b2520 CDS yfhM NC_000913.3 2647326 2652287 R bacterial alpha2-macroglobulin colonization factor ECAM; anti-host protease defense factor; periplasmic inner membrane-anchored lipoprotein complement(2647326..2652287) Escherichia coli str. K-12 substr. MG1655 947302 b2521 CDS sseA NC_000913.3 2652494 2653339 D putative thiosulfate sulfurtransferase; 3-mercaptopyruvate sulfurtransferase 2652494..2653339 Escherichia coli str. K-12 substr. MG1655 946993 b2522 CDS sseB NC_000913.3 2654157 2654933 R enhanced serine sensitivity; rhodanase-like enzyme, sulfur transfer from thiosulfate complement(2654157..2654933) Escherichia coli str. K-12 substr. MG1655 946994 b2523 CDS pepB NC_000913.3 2655075 2656358 R putative peptidase; aminopeptidase B complement(2655075..2656358) Escherichia coli str. K-12 substr. MG1655 948766 b2524 CDS iscX NC_000913.3 2656536 2656736 R Fe(2+) donor and activity modulator for cysteine desulfurase complement(2656536..2656736) Escherichia coli str. K-12 substr. MG1655 945196 b2525 CDS fdx NC_000913.3 2656748 2657083 R [2FE-2S] ferredoxin, electron carrer protein; [2Fe-2S] ferredoxin complement(2656748..2657083) Escherichia coli str. K-12 substr. MG1655 947160 b2526 CDS hscA NC_000913.3 2657085 2658935 R DnaK-homologue chaperone Hsc66; DnaK-like molecular chaperone specific for IscU complement(2657085..2658935) Escherichia coli str. K-12 substr. MG1655 944885 b2527 CDS hscB NC_000913.3 2658952 2659467 R HscA co-chaperone, J domain-containing protein Hsc56; IscU-specific chaperone HscAB complement(2658952..2659467) Escherichia coli str. K-12 substr. MG1655 946995 b2528 CDS iscA NC_000913.3 2659563 2659886 R FeS cluster assembly protein complement(2659563..2659886) Escherichia coli str. K-12 substr. MG1655 946999 b2529 CDS iscU NC_000913.3 2659903 2660289 R iron-sulfur cluster assembly scaffold protein complement(2659903..2660289) Escherichia coli str. K-12 substr. MG1655 947002 b2530 CDS iscS NC_000913.3 2660317 2661531 R cysteine desulfurase; cysteine desulfurase (tRNA sulfurtransferase) PLP-dependent; cysteine desulfurase (tRNA sulfurtransferase), PLP-dependent complement(2660317..2661531) Escherichia coli str. K-12 substr. MG1655 947004 b2531 CDS iscR NC_000913.3 2661643 2662131 R Fe-S cluster-containing transcription factor; transcriptional repressor of iscRSUA operon; isc operon transcriptional repressor; suf operon transcriptional activator; oxidative stress- and iron starvation-inducible; autorepressor complement(2661643..2662131) Escherichia coli str. K-12 substr. MG1655 945279 b2532 CDS trmJ NC_000913.3 2662583 2663323 R tRNA mC32,mU32 2'-O-methyltransferase, SAM-dependent complement(2662583..2663323) Escherichia coli str. K-12 substr. MG1655 948610 b2533 CDS suhB NC_000913.3 2663442 2664245 D inositol-1-monophosphatase; inositol monophosphatase 2663442..2664245 Escherichia coli str. K-12 substr. MG1655 947285 b2534 CDS yfhR NC_000913.3 2664390 2665244 D putative enzyme (3.4.-); putative S9 family prolyl oligopeptidase 2664390..2665244 Escherichia coli str. K-12 substr. MG1655 945059 b2535 CDS csiE NC_000913.3 2665435 2666715 D stationary phase inducible protein 2665435..2666715 Escherichia coli str. K-12 substr. MG1655 947009 b2536 CDS hcaT NC_000913.3 2666707 2667846 R MFS (major facilitator superfamily) transporter; putative 3-phenylpropionic transporter complement(2666707..2667846) Escherichia coli str. K-12 substr. MG1655 947007 b2537 CDS hcaR NC_000913.3 2668006 2668896 R transcriptional activator of hca cluster; completely contained in another CDS; hca operon transcriptional regulator complement(2668006..2668896) Escherichia coli str. K-12 substr. MG1655 947000 b4706 CDS iroK NC_000913.3 2668006 2668071 R completely contained in another CDS; 3-hydroxypropionic acid resistance peptide complement(2668006..2668071) Escherichia coli str. K-12 substr. MG1655 14678510 b2538 CDS hcaE NC_000913.3 2669032 2670393 D 3-phenylpropionate dioxygenase, large (alpha) subunit 2669032..2670393 Escherichia coli str. K-12 substr. MG1655 946998 b2539 CDS hcaF NC_000913.3 2670390 2670908 D small terminal subunit of phenylpropionate dioxygenase; 3-phenylpropionate dioxygenase, small (beta) subunit 2670390..2670908 Escherichia coli str. K-12 substr. MG1655 946997 b2540 CDS hcaC NC_000913.3 2670908 2671228 D ferredoxin subunit of phenylpropionate dioxygenase; 3-phenylpropionate dioxygenase, ferredoxin subunit 2670908..2671228 Escherichia coli str. K-12 substr. MG1655 947015 b2541 CDS hcaB NC_000913.3 2671225 2672037 D 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase 2671225..2672037 Escherichia coli str. K-12 substr. MG1655 945346 b2542 CDS hcaD NC_000913.3 2672047 2673249 D ferredoxin reductase subunit of phenylpropionate dioxygenase; phenylpropionate dioxygenase, ferredoxin reductase subunit 2672047..2673249 Escherichia coli str. K-12 substr. MG1655 945427 b2543 CDS yphA NC_000913.3 2673346 2673768 D DoxX family inner membrane protein 2673346..2673768 Escherichia coli str. K-12 substr. MG1655 947365 b2544 CDS yphB NC_000913.3 2673816 2674688 R mutarotase superfamily protein, YphB family complement(2673816..2674688) Escherichia coli str. K-12 substr. MG1655 947017 b2545 CDS yphC NC_000913.3 2674700 2675761 R putative oxidoreductase; putative Zn-dependent NAD(P)-binding oxidoreductase complement(2674700..2675761) Escherichia coli str. K-12 substr. MG1655 947019 b2546 CDS yphD NC_000913.3 2675827 2676825 R putative transport system permease protein; putative sugar ABC transporter permease complement(2675827..2676825) Escherichia coli str. K-12 substr. MG1655 949063 b2547 CDS yphE NC_000913.3 2676850 2678361 R putative ATP-binding component of a transport system; putative sugar ABC transporter ATPase complement(2676850..2678361) Escherichia coli str. K-12 substr. MG1655 948990 b2548 CDS yphF NC_000913.3 2678384 2679367 R putative LACI-type transcriptional regulator; putative sugar ABC transporter periplasmic binding protein complement(2678384..2679367) Escherichia coli str. K-12 substr. MG1655 947020 b2549 CDS yphG NC_000913.3 2679464 2682745 R DUF4380 domain-containing TPR repeat protein complement(2679464..2682745) Escherichia coli str. K-12 substr. MG1655 947021 b2550 CDS yphH NC_000913.3 2682863 2684056 D putative NAGC-like transcriptional regulator; putative DNA-binding transcriptional regulator 2682863..2684056 Escherichia coli str. K-12 substr. MG1655 947023 b2551 CDS glyA NC_000913.3 2684254 2685507 R serine hydroxymethyltransferase complement(2684254..2685507) Escherichia coli str. K-12 substr. MG1655 947022 b2552 CDS hmp NC_000913.3 2685835 2687025 D dihydropteridine reductase, ferrisiderophore reductase activity; fused nitric oxide dioxygenase/dihydropteridine reductase 2 2685835..2687025 Escherichia coli str. K-12 substr. MG1655 947018 b2553 CDS glnB NC_000913.3 2687070 2687408 R regulatory protein P-II for glutamine synthetase complement(2687070..2687408) Escherichia coli str. K-12 substr. MG1655 947016 b2554 CDS glrR NC_000913.3 2687469 2688803 R putative 2-component transcriptional regulator; response regulator regulating glmY sRNA in two-component system with sensor protein GlrK complement(2687469..2688803) Escherichia coli str. K-12 substr. MG1655 947042 b2555 CDS yfhG NC_000913.3 2688793 2689506 R putative alpha helix protein; putative outer membrane protein modulating the QseEF response complement(2688793..2689506) Escherichia coli str. K-12 substr. MG1655 947010 b2556 CDS glrK NC_000913.3 2689671 2691098 R putative 2-component sensor protein; sensor protein kinase regulating glmY sRNA in two-component system with response regulator GlrR complement(2689671..2691098) Escherichia coli str. K-12 substr. MG1655 947013 b2557 CDS purL NC_000913.3 2691656 2695543 R phosphoribosylformyl-glycineamide synthetase = FGAM synthetase; phosphoribosylformyl-glycineamide synthetase complement(2691656..2695543) Escherichia coli str. K-12 substr. MG1655 947032 b2558 CDS mltF NC_000913.3 2695801 2697357 D putative periplasmic binding transport protein; membrane-bound lytic transglycosylase F, murein hydrolase 2695801..2697357 Escherichia coli str. K-12 substr. MG1655 947028 b2559 CDS tadA NC_000913.3 2697354 2697857 R tRNA-specific adenosine deaminase complement(2697354..2697857) Escherichia coli str. K-12 substr. MG1655 947027 b2560 CDS pgpC NC_000913.3 2697915 2698550 R phosphatidylglycerophosphatase C, membrane bound complement(2697915..2698550) Escherichia coli str. K-12 substr. MG1655 947026 b2561 CDS yfhH NC_000913.3 2698759 2699607 D putative DNA-binding transcriptional regulator 2698759..2699607 Escherichia coli str. K-12 substr. MG1655 947030 b2562 CDS yfhL NC_000913.3 2699663 2699923 D putative 4Fe-4S cluster-containing protein 2699663..2699923 Escherichia coli str. K-12 substr. MG1655 947031 b4687 CDS shoB NC_000913.3 2700117 2700197 R toxic membrane protein complement(2700117..2700197) Escherichia coli str. K-12 substr. MG1655 7751620 b2563 CDS acpS NC_000913.3 2700618 2700998 R CoA:apo-[acyl-carrier-protein] pantetheinephosphotransferase; holo-[acyl-carrier-protein] synthase 1 complement(2700618..2700998) Escherichia coli str. K-12 substr. MG1655 947037 b2564 CDS pdxJ NC_000913.3 2700998 2701729 R pyridoxine biosynthesis; pyridoxine 5'-phosphate synthase complement(2700998..2701729) Escherichia coli str. K-12 substr. MG1655 947039 b2565 CDS recO NC_000913.3 2701741 2702469 R protein interacts with RecR and possibly RecF proteins; gap repair protein complement(2701741..2702469) Escherichia coli str. K-12 substr. MG1655 947038 b2566 CDS era NC_000913.3 2702481 2703386 R GTP-binding protein; membrane-associated, 16S rRNA-binding GTPase complement(2702481..2703386) Escherichia coli str. K-12 substr. MG1655 947036 b2567 CDS rnc NC_000913.3 2703383 2704063 R RNase III, ds RNA; RNase III complement(2703383..2704063) Escherichia coli str. K-12 substr. MG1655 947033 b2568 CDS lepB NC_000913.3 2704335 2705309 R leader peptidase (signal peptidase I) complement(2704335..2705309) Escherichia coli str. K-12 substr. MG1655 947040 b2569 CDS lepA NC_000913.3 2705325 2707124 R GTP-binding elongation factor, may be inner membrane protein; back-translocating elongation factor EF4, GTPase complement(2705325..2707124) Escherichia coli str. K-12 substr. MG1655 947051 b2570 CDS rseC NC_000913.3 2707322 2707801 R sigma-E factor, negative regulatory protein; SoxR iron-sulfur cluster reduction factor component complement(2707322..2707801) Escherichia coli str. K-12 substr. MG1655 947052 b2571 CDS rseB NC_000913.3 2707798 2708754 R regulates activity of sigma-E factor; anti-sigma E factor, binds RseA complement(2707798..2708754) Escherichia coli str. K-12 substr. MG1655 947054 b2572 CDS rseA NC_000913.3 2708754 2709404 R sigma-E factor, negative regulatory protein; anti-sigma factor complement(2708754..2709404) Escherichia coli str. K-12 substr. MG1655 947053 b2573 CDS rpoE NC_000913.3 2709437 2710012 R RNA polymerase, sigma-E factor; heat shock and oxidative stress; RNA polymerase sigma E factor complement(2709437..2710012) Escherichia coli str. K-12 substr. MG1655 947050 b2574 CDS nadB NC_000913.3 2710420 2712042 D quinolinate synthetase, B protein; quinolinate synthase, L-aspartate oxidase (B protein) subunit 2710420..2712042 Escherichia coli str. K-12 substr. MG1655 947049 b2575 CDS trmN NC_000913.3 2712027 2712764 R putative enzyme; tRNA1(Val) (adenine(37)-N6)-methyltransferase complement(2712027..2712764) Escherichia coli str. K-12 substr. MG1655 947047 b2576 CDS srmB NC_000913.3 2712896 2714230 D ATP-dependent RNA helicase 2712896..2714230 Escherichia coli str. K-12 substr. MG1655 947055 b2577 CDS yfiE NC_000913.3 2714439 2715320 R putative transcriptional regulator LYSR-type; putative DNA-binding transcriptional regulator complement(2714439..2715320) Escherichia coli str. K-12 substr. MG1655 947064 b2578 CDS eamB NC_000913.3 2715423 2716010 D cysteine and O-acetylserine exporter 2715423..2716010 Escherichia coli str. K-12 substr. MG1655 947065 b2579 CDS grcA NC_000913.3 2716066 2716449 R putative formate acetyltransferase; autonomous glycyl radical cofactor complement(2716066..2716449) Escherichia coli str. K-12 substr. MG1655 947068 b2580 CDS ung NC_000913.3 2716754 2717443 D uracil-DNA-glycosylase 2716754..2717443 Escherichia coli str. K-12 substr. MG1655 947067 b2581 CDS yfiF NC_000913.3 2717491 2718528 R putative methyltransferase complement(2717491..2718528) Escherichia coli str. K-12 substr. MG1655 947066 b2582 CDS trxC NC_000913.3 2718735 2719154 D putative thioredoxin-like protein; thioredoxin 2 2718735..2719154 Escherichia coli str. K-12 substr. MG1655 947062 b2583 CDS yfiP NC_000913.3 2719223 2719921 D DTW domain protein 2719223..2719921 Escherichia coli str. K-12 substr. MG1655 947057 b2584 CDS pka NC_000913.3 2719953 2722613 D protein lysine acetyltransferase 2719953..2722613 Escherichia coli str. K-12 substr. MG1655 947056 b2585 CDS pssA NC_000913.3 2722727 2724082 D phosphatidylserine synthase; phospholipid synthesis; phosphatidylserine synthase; CDP-diacylglycerol-serine O-phosphatidyltransferase 2722727..2724082 Escherichia coli str. K-12 substr. MG1655 947059 b2586 CDS yfiM NC_000913.3 2724128 2724451 D putative lipoprotein 2724128..2724451 Escherichia coli str. K-12 substr. MG1655 947060 b2587 CDS kgtP NC_000913.3 2724448 2725746 R alpha-ketoglutarate permease; alpha-ketoglutarate transporter complement(2724448..2725746) Escherichia coli str. K-12 substr. MG1655 947069 b2592 CDS clpB NC_000913.3 2731600 2734173 R heat shock protein; protein disaggregation chaperone complement(2731600..2734173) Escherichia coli str. K-12 substr. MG1655 947077 b2593 CDS yfiH NC_000913.3 2734303 2735034 R UPF0124 family protein complement(2734303..2735034) Escherichia coli str. K-12 substr. MG1655 947089 b2594 CDS rluD NC_000913.3 2735031 2736011 R 23S rRNA pseudouridine(1911,1915,1917) synthase complement(2735031..2736011) Escherichia coli str. K-12 substr. MG1655 947087 b2595 CDS bamD NC_000913.3 2736146 2736883 D BamABCDE complex OM biogenesis lipoprotein 2736146..2736883 Escherichia coli str. K-12 substr. MG1655 947086 b2597 CDS raiA NC_000913.3 2737154 2737495 D putative yhbH sigma 54 modulator; cold shock protein associated with 30S ribosomal subunit 2737154..2737495 Escherichia coli str. K-12 substr. MG1655 947129 b2598 CDS pheL NC_000913.3 2737599 2737646 D leader peptide of chorismate mutase-P-prephenate dehydratase; pheA gene leader peptide 2737599..2737646 Escherichia coli str. K-12 substr. MG1655 947080 b2599 CDS pheA NC_000913.3 2737745 2738905 D chorismate mutase-P and prephenate dehydratase; chorismate mutase and prephenate dehydratase, P-protein 2737745..2738905 Escherichia coli str. K-12 substr. MG1655 947081 b2600 CDS tyrA NC_000913.3 2738948 2740069 R chorismate mutase-T and prephenate dehydrogenase; fused chorismate mutase T/prephenate dehydrogenase complement(2738948..2740069) Escherichia coli str. K-12 substr. MG1655 947115 b2601 CDS aroF NC_000913.3 2740080 2741150 R 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase, tyrosine repressible); 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, tyrosine-repressible complement(2740080..2741150) Escherichia coli str. K-12 substr. MG1655 947084 b2602 CDS yfiL NC_000913.3 2741360 2741725 D lipoprotein 2741360..2741725 Escherichia coli str. K-12 substr. MG1655 947106 b2603 CDS yfiR NC_000913.3 2741875 2742393 D putative periplasmic inhibitor of YfiN activity 2741875..2742393 Escherichia coli str. K-12 substr. MG1655 947090 b2604 CDS yfiN NC_000913.3 2742383 2743609 D putative membrane-anchored diguanylate cyclase 2742383..2743609 Escherichia coli str. K-12 substr. MG1655 947091 b2605 CDS yfiB NC_000913.3 2743625 2744107 D putative outer membrane protein; OM lipoprotein putative positive effector of YfiN activity 2743625..2744107 Escherichia coli str. K-12 substr. MG1655 947094 b2606 CDS rplS NC_000913.3 2744183 2744530 R 50S ribosomal subunit protein L19 complement(2744183..2744530) Escherichia coli str. K-12 substr. MG1655 947096 b2607 CDS trmD NC_000913.3 2744572 2745339 R tRNA methyltransferase; tRNA (guanine-7-)-methyltransferase; tRNA m(1)G37 methyltransferase, SAM-dependent complement(2744572..2745339) Escherichia coli str. K-12 substr. MG1655 947099 b2608 CDS rimM NC_000913.3 2745370 2745918 R ribosome maturation factor complement(2745370..2745918) Escherichia coli str. K-12 substr. MG1655 947101 b2609 CDS rpsP NC_000913.3 2745937 2746185 R 30S ribosomal subunit protein S16 complement(2745937..2746185) Escherichia coli str. K-12 substr. MG1655 947103 b2610 CDS ffh NC_000913.3 2746434 2747795 R GTP-binding export factor binds to signal sequence, GTP and RNA; Signal Recognition Particle (SRP) component with 4.5S RNA (ffs) complement(2746434..2747795) Escherichia coli str. K-12 substr. MG1655 947102 b2611 CDS ypjD NC_000913.3 2747962 2748753 D cytochrome c assembly protein family inner membrane protein 2747962..2748753 Escherichia coli str. K-12 substr. MG1655 947098 b4461 CDS yfjD NC_000913.3 2748774 2750060 D putative membrane protein; UPF0053 family inner membrane protein 2748774..2750060 Escherichia coli str. K-12 substr. MG1655 2847739 b2614 CDS grpE NC_000913.3 2750115 2750708 R phage lambda replication; host DNA synthesis; heat shock protein; protein repair; heat shock protein complement(2750115..2750708) Escherichia coli str. K-12 substr. MG1655 947097 b2615 CDS nadK NC_000913.3 2750831 2751709 D NAD kinase 2750831..2751709 Escherichia coli str. K-12 substr. MG1655 947092 b2616 CDS recN NC_000913.3 2751795 2753456 D protein used in recombination and DNA repair; recombination and repair protein 2751795..2753456 Escherichia coli str. K-12 substr. MG1655 947105 b2617 CDS bamE NC_000913.3 2753605 2753946 D small membrane protein A; lipoprotein component of BamABCDE OM biogenesis complex 2753605..2753946 Escherichia coli str. K-12 substr. MG1655 945583 b2618 CDS ratB NC_000913.3 2754008 2754298 R UPF0125 family protein complement(2754008..2754298) Escherichia coli str. K-12 substr. MG1655 945078 b2619 CDS ratA NC_000913.3 2754288 2754764 R toxic UPF0083 family protein inhibitor of 70S ribosome formation complement(2754288..2754764) Escherichia coli str. K-12 substr. MG1655 945614 b2620 CDS smpB NC_000913.3 2754896 2755378 D small protein B; tmRNA-binding trans-translation protein 2754896..2755378 Escherichia coli str. K-12 substr. MG1655 947296 b2622 CDS intA NC_000913.3 2756159 2757400 D prophage CP4-57 integrase; CP4-57 prophage; integrase 2756159..2757400 Escherichia coli str. K-12 substr. MG1655 946160 b2623 CDS yfjH NC_000913.3 2757644 2758600 R putative histone; CP4-57 prophage; uncharacterized protein complement(2757644..2758600) Escherichia coli str. K-12 substr. MG1655 946123 b2624 CDS alpA NC_000913.3 2758644 2758856 D prophage CP4-57 regulatory protein alpA; CP4-57 prophage; DNA-binding transcriptional activator 2758644..2758856 Escherichia coli str. K-12 substr. MG1655 946758 b2625 CDS yfjI NC_000913.3 2758985 2760394 D CP4-57 prophage; uncharacterized protein 2758985..2760394 Escherichia coli str. K-12 substr. MG1655 944764 b2626 CDS yfjJ NC_000913.3 2760547 2761173 D CP4-57 prophage; uncharacterized protein 2760547..2761173 Escherichia coli str. K-12 substr. MG1655 947112 b2627 CDS yfjK NC_000913.3 2761351 2763540 R radiation resistance protein; DEAD/H helicase-like protein; CP4-57 putative defective prophage complement(2761351..2763540) Escherichia coli str. K-12 substr. MG1655 947111 b2628 CDS yfjL NC_000913.3 2763537 2765153 R CP4-57 putative defective prophage, DUF4297/DUF1837 polymorphic toxin family protein complement(2763537..2765153) Escherichia coli str. K-12 substr. MG1655 947110 b2629 CDS yfjM NC_000913.3 2765513 2765776 R CP4-57 prophage; uncharacterized protein complement(2765513..2765776) Escherichia coli str. K-12 substr. MG1655 947108 b2630 CDS rnlA NC_000913.3 2765918 2766991 D putative cell division protein; CP4-57 prophage; RNase LS 2765918..2766991 Escherichia coli str. K-12 substr. MG1655 947107 b2631 CDS rnlB NC_000913.3 2766984 2767355 D CP4-57 prophage; uncharacterized protein 2766984..2767355 Escherichia coli str. K-12 substr. MG1655 947113 b2632 CDS yfjP NC_000913.3 2767710 2768573 D putative GTP-binding protein; CP4-57 prophage; 50S ribosome-binding GTPase family protein 2767710..2768573 Escherichia coli str. K-12 substr. MG1655 947124 b2633 CDS yfjQ NC_000913.3 2768665 2769486 D CP4-57 prophage; uncharacterized protein 2768665..2769486 Escherichia coli str. K-12 substr. MG1655 947127 b2634 CDS yfjR NC_000913.3 2769703 2770404 D CP4-57 prophage; putative DNA-binding transcriptional regulator 2769703..2770404 Escherichia coli str. K-12 substr. MG1655 947309 b2635 CDS ypjK NC_000913.3 2770445 2770681 D CP4-57 prophage; putative inner membrane protein 2770445..2770681 Escherichia coli str. K-12 substr. MG1655 2847710 b2636 CDS yfjS NC_000913.3 2770681 2771124 D CP4-57 prophage; uncharacterized protein 2770681..2771124 Escherichia coli str. K-12 substr. MG1655 945668 b2637 CDS yfjT NC_000913.3 2771148 2771615 D CP4-57 prophage; putative periplasmic protein 2771148..2771615 Escherichia coli str. K-12 substr. MG1655 947616 b2638 CDS yfjU NC_000913.3 2772002 2772154 R CP4-57 prophage; conserved protein;Phage or Prophage Related; <NA> complement(2772002..2772154) Escherichia coli str. K-12 substr. MG1655 945062 b2641 CDS yfjV NC_000913.3 2772167 2773182 R pseudogene, CP4-57 prophage;Phage or Prophage Related; putative pump protein; <NA> complement(join(2772167..2773066,2773066..2773182)) Escherichia coli str. K-12 substr. MG1655 947563 b2642 CDS yfjW NC_000913.3 2773318 2775021 D CP4-57 prophage; putative inner membrane protein 2773318..2775021 Escherichia coli str. K-12 substr. MG1655 947128 b4644 CDS ypjI NC_000913.3 2775545 2775816 D pseudogene, CP4-57 putative prophage remnant;Phage or Prophage Related; <NA> join(2775545..2775724,2775724..2775816) Escherichia coli str. K-12 substr. MG1655 5625570 b2643 CDS yfjX NC_000913.3 2775919 2776377 D CP4-57 prophage; putative antirestriction protein 2775919..2776377 Escherichia coli str. K-12 substr. MG1655 947126 b2644 CDS yfjY NC_000913.3 2776386 2776868 D putative DNA repair protein; CP4-57 prophage; putative DNA repair protein 2776386..2776868 Escherichia coli str. K-12 substr. MG1655 947125 b4548 CDS ypjJ NC_000913.3 2776877 2777077 D uncharacterized protein 2776877..2777077 Escherichia coli str. K-12 substr. MG1655 1450287 b2645 CDS yfjZ NC_000913.3 2777115 2777432 D CP4-57 prophage; antitoxin of the YpjF-YfjZ toxin-antitoxin system 2777115..2777432 Escherichia coli str. K-12 substr. MG1655 947123 b2646 CDS ypjF NC_000913.3 2777453 2777782 D CP4-57 prophage; toxin of the YpjF-YfjZ toxin-antitoxin system 2777453..2777782 Escherichia coli str. K-12 substr. MG1655 947131 b2647 CDS ypjA NC_000913.3 2778146 2782726 R putative ATP-binding component of a transport system; adhesin-like autotransporter complement(2778146..2782726) Escherichia coli str. K-12 substr. MG1655 948630 b2648 CDS pinH NC_000913.3 2783065 2783304 R pseudogene, invertase resolvase family; <NA> complement(2783065..2783304) Escherichia coli str. K-12 substr. MG1655 947250 b2650 CDS ypjC NC_000913.3 2783638 2785011 R pseudogene; <NA> complement(2783638..2785011) Escherichia coli str. K-12 substr. MG1655 947640 b4462 CDS ygaQ NC_000913.3 2786397 2788649 D uncharacterized protein; putative enzyme; <NA> 2786397..2788649 Escherichia coli str. K-12 substr. MG1655 2847762 b2659 CDS csiD NC_000913.3 2788985 2789962 D carbon starvation protein 2788985..2789962 Escherichia coli str. K-12 substr. MG1655 948076 b2660 CDS lhgO NC_000913.3 2789982 2791250 D L-2-hydroxyglutarate oxidase 2789982..2791250 Escherichia coli str. K-12 substr. MG1655 948069 b2661 CDS gabD NC_000913.3 2791273 2792721 D succinate-semialdehyde dehydrogenase, NADP-dependent activity; succinate-semialdehyde dehydrogenase I, NADP-dependent 2791273..2792721 Escherichia coli str. K-12 substr. MG1655 948060 b2662 CDS gabT NC_000913.3 2792735 2794015 D 4-aminobutyrate aminotransferase activity; 4-aminobutyrate aminotransferase, PLP-dependent 2792735..2794015 Escherichia coli str. K-12 substr. MG1655 948067 b2663 CDS gabP NC_000913.3 2794253 2795653 D transport permease protein of gamma-aminobutyrate; gamma-aminobutyrate transporter 2794253..2795653 Escherichia coli str. K-12 substr. MG1655 948049 b2664 CDS csiR NC_000913.3 2795674 2796336 D putative transcriptional regulator; transcriptional repressor of csiD 2795674..2796336 Escherichia coli str. K-12 substr. MG1655 948055 b2665 CDS ygaU NC_000913.3 2796337 2796786 R uncharacterized protein complement(2796337..2796786) Escherichia coli str. K-12 substr. MG1655 947144 b2666 CDS yqaE NC_000913.3 2796870 2797028 R cyaR sRNA-regulated protein complement(2796870..2797028) Escherichia coli str. K-12 substr. MG1655 947138 b2667 CDS ygaV NC_000913.3 2797211 2797510 D tributyltin-inducible repressor of ygaVP 2797211..2797510 Escherichia coli str. K-12 substr. MG1655 947136 b2668 CDS ygaP NC_000913.3 2797520 2798044 D DUF2892 family inner membrane rhodanese 2797520..2798044 Escherichia coli str. K-12 substr. MG1655 947135 b2669 CDS stpA NC_000913.3 2798091 2798495 R DNA-binding protein; H-NS-like protein; chaperone activity; RNA splicing?; DNA binding protein, nucleoid-associated complement(2798091..2798495) Escherichia coli str. K-12 substr. MG1655 947130 b2670 CDS alaE NC_000913.3 2799164 2799613 D alanine exporter, alanine-inducible, stress-responsive 2799164..2799613 Escherichia coli str. K-12 substr. MG1655 947147 b2671 CDS ygaC NC_000913.3 2799650 2799994 R uncharacterized protein complement(2799650..2799994) Escherichia coli str. K-12 substr. MG1655 947156 b2672 CDS ygaM NC_000913.3 2800146 2800475 D putative membrane-anchored DUF883 family ribosome-binding protein 2800146..2800475 Escherichia coli str. K-12 substr. MG1655 947157 b2673 CDS nrdH NC_000913.3 2800723 2800968 D glutaredoxin-like protein; hydrogen donor; hydrogen donor for NrdEF electron transport system; glutaredoxin-like protein 2800723..2800968 Escherichia coli str. K-12 substr. MG1655 947161 b2674 CDS nrdI NC_000913.3 2800965 2801375 D NrdEF cluster assembly flavodoxin 2800965..2801375 Escherichia coli str. K-12 substr. MG1655 947158 b2675 CDS nrdE NC_000913.3 2801348 2803492 D ribonucleoside-diphosphate reductase 2, alpha subunit 2801348..2803492 Escherichia coli str. K-12 substr. MG1655 947155 b2676 CDS nrdF NC_000913.3 2803502 2804461 D ribonucleoside-diphosphate reductase 2, beta chain, frag; ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like protein 2803502..2804461 Escherichia coli str. K-12 substr. MG1655 947149 b2677 CDS proV NC_000913.3 2804815 2806017 D ATP-binding component of transport system for glycine, betaine and proline; glycine betaine/proline ABC transporter periplasmic binding protein 2804815..2806017 Escherichia coli str. K-12 substr. MG1655 947148 b2678 CDS proW NC_000913.3 2806010 2807074 D high-affinity transport system for glycine betaine and proline; membrane component of ABC superfamily; glycine betaine/proline ABC transporter permease 2806010..2807074 Escherichia coli str. K-12 substr. MG1655 947145 b2679 CDS proX NC_000913.3 2807132 2808124 D high-affinity transport system for glycine betaine and proline; periplasmic-binding component of ABC superfamily; glycine betaine/proline ABC transporter periplasmic binding protein; cold shock protein 2807132..2808124 Escherichia coli str. K-12 substr. MG1655 947165 b2681 CDS ygaY NC_000913.3 2808316 2809493 D pseudogene, major facilitator transporter superfamily;putative transport; Not classified; putative transport protein; <NA> join(2808316..2808576,2808570..2809493) Escherichia coli str. K-12 substr. MG1655 2847696 b2682 CDS ygaZ NC_000913.3 2809617 2810354 D putative L-valine exporter, norvaline resistance protein 2809617..2810354 Escherichia coli str. K-12 substr. MG1655 945093 b2683 CDS ygaH NC_000913.3 2810344 2810679 D putative L-valine exporter, norvaline resistance protein 2810344..2810679 Escherichia coli str. K-12 substr. MG1655 945111 b2684 CDS mprA NC_000913.3 2810770 2811300 D regulator of plasmid mcrB operon (microcin B17 synthesis); transcriptional repressor of microcin B17 synthesis and multidrug efflux 2810770..2811300 Escherichia coli str. K-12 substr. MG1655 945282 b2685 CDS emrA NC_000913.3 2811427 2812599 D multidrug resistance secretion protein; multidrug efflux system 2811427..2812599 Escherichia coli str. K-12 substr. MG1655 947166 b2686 CDS emrB NC_000913.3 2812616 2814154 D multidrug resistance; probably membrane translocase; multidrug efflux system protein 2812616..2814154 Escherichia coli str. K-12 substr. MG1655 947167 b2687 CDS luxS NC_000913.3 2814218 2814733 R S-ribosylhomocysteine lyase complement(2814218..2814733) Escherichia coli str. K-12 substr. MG1655 947168 b2688 CDS gshA NC_000913.3 2814883 2816439 R glutamate-cysteine ligase complement(2814883..2816439) Escherichia coli str. K-12 substr. MG1655 944881 b2689 CDS yqaA NC_000913.3 2816512 2816940 R COG1238 family inner membrane protein complement(2816512..2816940) Escherichia coli str. K-12 substr. MG1655 945419 b2690 CDS yqaB NC_000913.3 2816937 2817503 R putative phosphatase; fructose-1-P and 6-phosphogluconate phosphatase complement(2816937..2817503) Escherichia coli str. K-12 substr. MG1655 945776 b2696 CDS csrA NC_000913.3 2818961 2819146 R carbon storage regulator; controls glycogen synthesis, gluconeogenesis, cell size and surface properties; pleiotropic regulatory protein for carbon source metabolism complement(2818961..2819146) Escherichia coli str. K-12 substr. MG1655 947176 b2697 CDS alaS NC_000913.3 2819381 2822011 R alanyl-tRNA synthetase complement(2819381..2822011) Escherichia coli str. K-12 substr. MG1655 947175 b2698 CDS recX NC_000913.3 2822139 2822639 R regulator, OraA protein; regulatory protein for RecA complement(2822139..2822639) Escherichia coli str. K-12 substr. MG1655 947172 b2699 CDS recA NC_000913.3 2822708 2823769 R DNA strand exchange and renaturation, DNA-dependent ATPase, DNA- and ATP-dependent coprotease; DNA recombination and repair protein; ssDNA-dependent ATPase; synaptase; ssDNA and dsDNA binding protein; ATP-dependent homologous DNA strand exchanger; recombinase A; LexA autocleavage cofactor complement(2822708..2823769) Escherichia coli str. K-12 substr. MG1655 947170 b2700 CDS pncC NC_000913.3 2823849 2824346 R nicotinamide-nucleotide amidohydrolase; NMN amidohydrolase complement(2823849..2824346) Escherichia coli str. K-12 substr. MG1655 947169 b2701 CDS mltB NC_000913.3 2824491 2825576 R membrane-bound lytic murein transglycosylase B complement(2824491..2825576) Escherichia coli str. K-12 substr. MG1655 947184 b2702 CDS srlA NC_000913.3 2825832 2826395 D PTS system, glucitol/sorbitol-specific IIC component, one of two; glucitol/sorbitol-specific enzyme IIC component of PTS 2825832..2826395 Escherichia coli str. K-12 substr. MG1655 947575 b2703 CDS srlE NC_000913.3 2826392 2827351 D PTS system, glucitol/sorbitol-specific IIB component and second of two IIC components; glucitol/sorbitol-specific enzyme IIB component of PTS 2826392..2827351 Escherichia coli str. K-12 substr. MG1655 948933 b2704 CDS srlB NC_000913.3 2827362 2827733 D PTS system, glucitol/sorbitol-specific enzyme IIA component; glucitol/sorbitol-specific enzyme IIA component of PTS 2827362..2827733 Escherichia coli str. K-12 substr. MG1655 948971 b2705 CDS srlD NC_000913.3 2827737 2828516 D glucitol (sorbitol)-6-phosphate dehydrogenase; sorbitol-6-phosphate dehydrogenase 2827737..2828516 Escherichia coli str. K-12 substr. MG1655 948937 b2706 CDS srlM NC_000913.3 2828621 2828980 D glucitol operon activator; <NA> 2828621..2828980 Escherichia coli str. K-12 substr. MG1655 948938 b2707 CDS srlR NC_000913.3 2829047 2829820 D regulator for gut (srl), glucitol operon; sorbitol-inducible srl operon transcriptional repressor 2829047..2829820 Escherichia coli str. K-12 substr. MG1655 948942 b2708 CDS srlQ NC_000913.3 2829813 2830778 D D-arabinose 5-phosphate isomerase 2829813..2830778 Escherichia coli str. K-12 substr. MG1655 947587 b2709 CDS norR NC_000913.3 2830775 2832289 R putative 2-component transcriptional regulator; anaerobic nitric oxide reductase DNA-binding transcriptional activator complement(2830775..2832289) Escherichia coli str. K-12 substr. MG1655 947186 b2710 CDS norV NC_000913.3 2832476 2833915 D putative flavodoxin; anaerobic nitric oxide reductase flavorubredoxin 2832476..2833915 Escherichia coli str. K-12 substr. MG1655 948979 b2711 CDS norW NC_000913.3 2833912 2835045 D putative oxidoreductase; NADH:flavorubredoxin oxidoreductase 2833912..2835045 Escherichia coli str. K-12 substr. MG1655 947088 b2712 CDS hypF NC_000913.3 2835173 2837425 R transcriptional regulatory protein; carbamoyl phosphate phosphatase and [NiFe] hydrogenase maturation protein complement(2835173..2837425) Escherichia coli str. K-12 substr. MG1655 944963 b2713 CDS hydN NC_000913.3 2837578 2838105 R involved in electron transport from formate to hydrogen, Fe-S centers; formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit complement(2837578..2838105) Escherichia coli str. K-12 substr. MG1655 947190 b2714 CDS ascG NC_000913.3 2838254 2839264 R ascBF operon repressor; asc operon transcriptional repressor; prpBC operon repressor complement(2838254..2839264) Escherichia coli str. K-12 substr. MG1655 947305 b2715 CDS ascF NC_000913.3 2839524 2840981 D PTS system enzyme II ABC (asc), cryptic, transports specific beta-glucosides; cellobiose/arbutin/salicin-specific PTS enzymes, IIB and IC components 2839524..2840981 Escherichia coli str. K-12 substr. MG1655 947154 b2716 CDS ascB NC_000913.3 2840990 2842414 D 6-phospho-beta-glucosidase; cryptic; cryptic 6-phospho-beta-glucosidase 2840990..2842414 Escherichia coli str. K-12 substr. MG1655 947460 b2717 CDS hycI NC_000913.3 2842573 2843043 R protease involved in processing C-terminal end of the large subunit of hydrogenase 3; protease involved in processing C-terminal end of HycE complement(2842573..2843043) Escherichia coli str. K-12 substr. MG1655 947428 b2718 CDS hycH NC_000913.3 2843036 2843446 R processing of large subunit (HycE) of hydrogenase 3 (part of the FHL complex); hydrogenase 3 maturation protein complement(2843036..2843446) Escherichia coli str. K-12 substr. MG1655 947438 b2719 CDS hycG NC_000913.3 2843443 2844210 R hydrogenase activity; hydrogenase 3 and formate hydrogenase complex, HycG subunit complement(2843443..2844210) Escherichia coli str. K-12 substr. MG1655 947191 b2720 CDS hycF NC_000913.3 2844210 2844752 R probable iron-sulfur protein of hydrogenase 3 (part of FHL complex); formate hydrogenlyase complex iron-sulfur protein complement(2844210..2844752) Escherichia coli str. K-12 substr. MG1655 947048 b2721 CDS hycE NC_000913.3 2844762 2846471 R large subunit of hydrogenase 3 (part of FHL complex); hydrogenase 3, large subunit complement(2844762..2846471) Escherichia coli str. K-12 substr. MG1655 947396 b2722 CDS hycD NC_000913.3 2846489 2847412 R membrane-spanning protein of hydrogenase 3 (part of FHL complex); hydrogenase 3, membrane subunit complement(2846489..2847412) Escherichia coli str. K-12 substr. MG1655 948994 b2723 CDS hycC NC_000913.3 2847415 2849241 R membrane-spanning protein of hydrogenase 3 (part of FHL complex); hydrogenase 3, membrane subunit complement(2847415..2849241) Escherichia coli str. K-12 substr. MG1655 945327 b2724 CDS hycB NC_000913.3 2849238 2849849 R probable small subunit of hydrogenase-3, iron-sulfur protein (part of formate hydrogenlyase (FHL) complex); hydrogenase 3, Fe-S subunit complement(2849238..2849849) Escherichia coli str. K-12 substr. MG1655 948002 b2725 CDS hycA NC_000913.3 2849974 2850435 R transcriptional repression of hyc and hyp operons; regulator of the transcriptional regulator FhlA complement(2849974..2850435) Escherichia coli str. K-12 substr. MG1655 947193 b2726 CDS hypA NC_000913.3 2850647 2850997 D pleiotrophic effects on 3 hydrogenase isozymes; protein involved in nickel insertion into hydrogenases 3 2850647..2850997 Escherichia coli str. K-12 substr. MG1655 947195 b2727 CDS hypB NC_000913.3 2851001 2851873 D guanine-nucleotide binding protein, functions as nickel donor for large subunit of hydrogenase 3; GTP hydrolase involved in nickel liganding into hydrogenases 2851001..2851873 Escherichia coli str. K-12 substr. MG1655 947194 b2728 CDS hypC NC_000913.3 2851864 2852136 D pleiotrophic effects on 3 hydrogenase isozymes; hydrogenase maturation protein 2851864..2852136 Escherichia coli str. K-12 substr. MG1655 947192 b2729 CDS hypD NC_000913.3 2852136 2853257 D pleiotrophic effects on 3 hydrogenase isozymes; hydrogenase maturation protein 2852136..2853257 Escherichia coli str. K-12 substr. MG1655 947189 b2730 CDS hypE NC_000913.3 2853254 2854264 D plays structural role in maturation of all 3 hydrogenases; carbamoyl dehydratase, hydrogenases 1,2,3 maturation protein 2853254..2854264 Escherichia coli str. K-12 substr. MG1655 947182 b2731 CDS fhlA NC_000913.3 2854338 2856416 D formate hydrogen-lyase transcriptional activator for fdhF, hyc and hyp operons; formate hydrogenlyase transcriptional activator 2854338..2856416 Escherichia coli str. K-12 substr. MG1655 947181 b2732 CDS ygbA NC_000913.3 2856453 2856806 R uncharacterized protein complement(2856453..2856806) Escherichia coli str. K-12 substr. MG1655 947187 b2733 CDS mutS NC_000913.3 2857093 2859654 D methyl-directed mismatch repair; methyl-directed mismatch repair protein 2857093..2859654 Escherichia coli str. K-12 substr. MG1655 947206 b2734 CDS pphB NC_000913.3 2859760 2860416 D protein phosphatase 2; serine/threonine-specific protein phosphatase 2 2859760..2860416 Escherichia coli str. K-12 substr. MG1655 947196 b2735 CDS ygbI NC_000913.3 2860467 2861234 R putative DEOR-type transcriptional regulator; DeoR family putative transcriptional regulator complement(2860467..2861234) Escherichia coli str. K-12 substr. MG1655 947204 b2736 CDS ygbJ NC_000913.3 2861430 2862338 D putative dehydrogenase 2861430..2862338 Escherichia coli str. K-12 substr. MG1655 947200 b2737 CDS ygbK NC_000913.3 2862335 2863501 D FliA-regulated DUF1537 family protein 2862335..2863501 Escherichia coli str. K-12 substr. MG1655 947199 b2738 CDS ygbL NC_000913.3 2863593 2864231 D putative epimerase/aldolase; putative class II aldolase 2863593..2864231 Escherichia coli str. K-12 substr. MG1655 947197 b2739 CDS ygbM NC_000913.3 2864236 2865012 D putative hydroxypyruvate isomerase 2864236..2865012 Escherichia coli str. K-12 substr. MG1655 947207 b2740 CDS ygbN NC_000913.3 2865101 2866465 D putative transport protein; putative transporter 2865101..2866465 Escherichia coli str. K-12 substr. MG1655 947208 b2741 CDS rpoS NC_000913.3 2866559 2867551 R RNA polymerase, sigma S (sigma38) factor; synthesis of many growth phase related proteins; RNA polymerase, sigma S (sigma 38) factor complement(2866559..2867551) Escherichia coli str. K-12 substr. MG1655 947210 b2742 CDS nlpD NC_000913.3 2867614 2868753 R lipoprotein; activator of AmiC murein hydrolase activity, lipoprotein complement(2867614..2868753) Escherichia coli str. K-12 substr. MG1655 947011 b2743 CDS pcm NC_000913.3 2868893 2869519 R L-isoaspartate protein carboxylmethyltransferase type II complement(2868893..2869519) Escherichia coli str. K-12 substr. MG1655 944923 b2744 CDS umpG NC_000913.3 2869513 2870274 R survival protein; broad specificity 5'(3')-nucleotidase and polyphosphatase complement(2869513..2870274) Escherichia coli str. K-12 substr. MG1655 947211 b2745 CDS truD NC_000913.3 2870255 2871304 R putative hydrogenase subunit; tRNA(Glu) pseudouridine(13) synthase complement(2870255..2871304) Escherichia coli str. K-12 substr. MG1655 947214 b2746 CDS ispF NC_000913.3 2871301 2871780 R 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase complement(2871301..2871780) Escherichia coli str. K-12 substr. MG1655 945057 b2747 CDS ispD NC_000913.3 2871780 2872490 R 4-diphosphocytidyl-2C-methyl-D-erythritol synthase complement(2871780..2872490) Escherichia coli str. K-12 substr. MG1655 948269 b2748 CDS ftsB NC_000913.3 2872509 2872820 R cell division protein complement(2872509..2872820) Escherichia coli str. K-12 substr. MG1655 946033 b2749 CDS ygbE NC_000913.3 2873014 2873337 R putative cytochrome oxidase subunit; DUF3561 family inner membrane protein complement(2873014..2873337) Escherichia coli str. K-12 substr. MG1655 947268 b2750 CDS cysC NC_000913.3 2873387 2873992 R adenosine 5'-phosphosulfate kinase complement(2873387..2873992) Escherichia coli str. K-12 substr. MG1655 947221 b2751 CDS cysN NC_000913.3 2873992 2875419 R ATP-sulfurylase (ATP:sulfate adenylyltransferase), subunit 1, probably a GTPase; sulfate adenylyltransferase, subunit 1 complement(2873992..2875419) Escherichia coli str. K-12 substr. MG1655 947219 b2752 CDS cysD NC_000913.3 2875421 2876329 R ATP:sulfurylase (ATP:sulfate adenylyltransferase), subunit 2; sulfate adenylyltransferase, subunit 2 complement(2875421..2876329) Escherichia coli str. K-12 substr. MG1655 947217 b2753 CDS iap NC_000913.3 2876581 2877618 D aminopeptidase in alkaline phosphatase isozyme conversion 2876581..2877618 Escherichia coli str. K-12 substr. MG1655 947215 b2754 CDS ygbF NC_000913.3 2878569 2878853 R CRISPR adaptation ssRNA endonuclease complement(2878569..2878853) Escherichia coli str. K-12 substr. MG1655 947213 b2755 CDS ygbT NC_000913.3 2878855 2879772 R multifunctional endonuclease Cas1, CRISPR adaptation protein; DNA repair enzyme complement(2878855..2879772) Escherichia coli str. K-12 substr. MG1655 947228 b2756 CDS casE NC_000913.3 2879788 2880387 R CRISPR RNA precursor cleavage enzyme; CRISP RNA (crRNA) containing Cascade antiviral complex protein complement(2879788..2880387) Escherichia coli str. K-12 substr. MG1655 947226 b2757 CDS casD NC_000913.3 2880374 2881048 R CRISP RNA (crRNA) containing Cascade antiviral complex protein complement(2880374..2881048) Escherichia coli str. K-12 substr. MG1655 947225 b2758 CDS casC NC_000913.3 2881051 2882142 R CRISP RNA (crRNA) containing Cascade antiviral complex protein complement(2881051..2882142) Escherichia coli str. K-12 substr. MG1655 947224 b2759 CDS casB NC_000913.3 2882155 2882637 R CRISP RNA (crRNA) containing Cascade antiviral complex protein complement(2882155..2882637) Escherichia coli str. K-12 substr. MG1655 947223 b2760 CDS casA NC_000913.3 2882630 2884138 R CRISP RNA (crRNA) containing Cascade antiviral complex protein complement(2882630..2884138) Escherichia coli str. K-12 substr. MG1655 947222 b2761 CDS ygcB NC_000913.3 2884553 2887219 R Cascade complex anti-viral R-loop helicase-annealase Cas3 complement(2884553..2887219) Escherichia coli str. K-12 substr. MG1655 947229 b2762 CDS cysH NC_000913.3 2887578 2888312 R phosphoadenosine phosphosulfate reductase; PAPS reductase, thioredoxin dependent complement(2887578..2888312) Escherichia coli str. K-12 substr. MG1655 947230 b2763 CDS cysI NC_000913.3 2888387 2890099 R sulfite reductase, alpha subunit; sulfite reductase, beta subunit, NAD(P)-binding, heme-binding complement(2888387..2890099) Escherichia coli str. K-12 substr. MG1655 947231 b2764 CDS cysJ NC_000913.3 2890099 2891898 R sulfite reductase (NADPH), flavoprotein beta subunit; sulfite reductase, alpha subunit, flavoprotein complement(2890099..2891898) Escherichia coli str. K-12 substr. MG1655 947239 b2765 CDS queD NC_000913.3 2892214 2892579 D putative 6-pyruvoyl tetrahydrobiopterin synthase; 6-pyruvoyl tetrahydrobiopterin synthase (PTPS) 2892214..2892579 Escherichia coli str. K-12 substr. MG1655 945123 b2766 CDS ygcN NC_000913.3 2892657 2893928 D putative oxidoreductase 2892657..2893928 Escherichia coli str. K-12 substr. MG1655 946114 b2767 CDS ygcO NC_000913.3 2893919 2894179 D putative 4Fe-4S cluster-containing protein 2893919..2894179 Escherichia coli str. K-12 substr. MG1655 945120 b2768 CDS ygcP NC_000913.3 2894196 2894771 D putative anti-terminator regulatory protein; putative antiterminator regulatory protein 2894196..2894771 Escherichia coli str. K-12 substr. MG1655 947536 b2769 CDS ygcQ NC_000913.3 2894919 2895779 R putative flavoprotein complement(2894919..2895779) Escherichia coli str. K-12 substr. MG1655 946413 b2770 CDS ygcR NC_000913.3 2895776 2896555 R putative transport protein; putative flavoprotein complement(2895776..2896555) Escherichia coli str. K-12 substr. MG1655 947240 b2771 CDS ygcS NC_000913.3 2896533 2897870 R putative transport protein; putative MFS sugar transporter; membrane protein complement(2896533..2897870) Escherichia coli str. K-12 substr. MG1655 947238 b4463 CDS ygcU NC_000913.3 2897964 2899418 R putative FAD-linked oxidoreductase complement(2897964..2899418) Escherichia coli str. K-12 substr. MG1655 2847709 b2774 CDS ygcW NC_000913.3 2899488 2900273 R putative oxidoreductase; putative SDR family oxidoreductase complement(2899488..2900273) Escherichia coli str. K-12 substr. MG1655 947232 b2775 CDS yqcE NC_000913.3 2900592 2901869 D putative transport protein; putative MFS transporter, inner membrane protein 2900592..2901869 Escherichia coli str. K-12 substr. MG1655 947248 b2776 CDS ygcE NC_000913.3 2901896 2903374 D putative kinase 2901896..2903374 Escherichia coli str. K-12 substr. MG1655 946193 b2777 CDS queE NC_000913.3 2904747 2905418 R 7-carboxy-7-deazaguanine synthase; queosine biosynthesis complement(2904747..2905418) Escherichia coli str. K-12 substr. MG1655 947527 b4682 CDS yqcG NC_000913.3 2905557 2905697 D membrane stress resistance protein 2905557..2905697 Escherichia coli str. K-12 substr. MG1655 7751618 b2778 CDS ygcG NC_000913.3 2905711 2906583 D TPM domain protein, putative phosphatase 2905711..2906583 Escherichia coli str. K-12 substr. MG1655 945247 b2779 CDS eno NC_000913.3 2906643 2907941 R enolase complement(2906643..2907941) Escherichia coli str. K-12 substr. MG1655 945032 b2780 CDS pyrG NC_000913.3 2908029 2909666 R CTP synthetase complement(2908029..2909666) Escherichia coli str. K-12 substr. MG1655 946116 b2781 CDS mazG NC_000913.3 2909894 2910685 R nucleoside triphosphate pyrophosphohydrolase complement(2909894..2910685) Escherichia coli str. K-12 substr. MG1655 947254 b2782 CDS mazF NC_000913.3 2910756 2911091 R probable growth inhibitor, PemK-like, autoregulated; mRNA interferase toxin, antitoxin is MazE complement(2910756..2911091) Escherichia coli str. K-12 substr. MG1655 947252 b2783 CDS mazE NC_000913.3 2911091 2911339 R suppressor of inhibitory function of ChpA, PemI-like, autoregulated; antitoxin of the ChpA-ChpR toxin-antitoxin system complement(2911091..2911339) Escherichia coli str. K-12 substr. MG1655 947245 b2784 CDS relA NC_000913.3 2911417 2913651 R (p)ppGpp synthetase I (GTP pyrophosphokinase); regulation of RNA synthesis; stringent factor; (p)ppGpp synthetase I/GTP pyrophosphokinase complement(2911417..2913651) Escherichia coli str. K-12 substr. MG1655 947244 b2785 CDS rlmD NC_000913.3 2913699 2915000 R 23S rRNA m(5)U1939 methyltransferase, SAM-dependent complement(2913699..2915000) Escherichia coli str. K-12 substr. MG1655 947243 b2786 CDS barA NC_000913.3 2915057 2917813 D sensor-regulator, activates OmpR by phophorylation; hybrid sensory histidine kinase, in two-component regulatory system with UvrY 2915057..2917813 Escherichia coli str. K-12 substr. MG1655 947255 b2787 CDS gudD NC_000913.3 2918045 2919385 R (D)-glucarate dehydratase 1; (L)-idarate dehydratase; (L)-idarate epimerase; (D)-glucarate epimerase; D-glucarate dehydratase 1 complement(2918045..2919385) Escherichia coli str. K-12 substr. MG1655 947258 b2788 CDS gudX NC_000913.3 2919406 2920746 R putative (D)-glucarate dehydratase 2; glucarate dehydratase-related protein, substrate unknown complement(2919406..2920746) Escherichia coli str. K-12 substr. MG1655 947261 b2789 CDS gudP NC_000913.3 2920748 2922100 R putative D-glucarate permease (MFS family); putative D-glucarate transporter complement(2920748..2922100) Escherichia coli str. K-12 substr. MG1655 947265 b2790 CDS yqcA NC_000913.3 2922535 2922984 R short-chain flavodoxin, FMN-binding complement(2922535..2922984) Escherichia coli str. K-12 substr. MG1655 947151 b2791 CDS truC NC_000913.3 2923002 2923784 R tRNA(Ile1,Asp) pseudouridine(65) synthase complement(2923002..2923784) Escherichia coli str. K-12 substr. MG1655 947242 b2792 CDS yqcC NC_000913.3 2923784 2924113 R DUF446 family protein complement(2923784..2924113) Escherichia coli str. K-12 substr. MG1655 946027 b2793 CDS syd NC_000913.3 2924735 2925280 R interacts with secY; SecY-interacting protein complement(2924735..2925280) Escherichia coli str. K-12 substr. MG1655 947271 b2794 CDS queF NC_000913.3 2925348 2926196 D 7-cyano-7-deazaguanine reductase (NADPH-dependent) 2925348..2926196 Escherichia coli str. K-12 substr. MG1655 947270 b2795 CDS ygdH NC_000913.3 2926308 2927672 D UPF0717 family protein 2926308..2927672 Escherichia coli str. K-12 substr. MG1655 947266 b2796 CDS sdaC NC_000913.3 2928229 2929518 D probable serine transporter; putative serine transporter 2928229..2929518 Escherichia coli str. K-12 substr. MG1655 947264 b2797 CDS sdaB NC_000913.3 2929576 2930943 D L-serine dehydratase (deaminase), L-SD2; L-serine dehydratase 2 2929576..2930943 Escherichia coli str. K-12 substr. MG1655 947262 b2798 CDS ygdG NC_000913.3 2931055 2931810 D 5'-3' exonuclease; Ssb-binding protein, misidentified as ExoIX 2931055..2931810 Escherichia coli str. K-12 substr. MG1655 947256 b2799 CDS fucO NC_000913.3 2931865 2933013 R L-1,2-propanediol oxidoreductase complement(2931865..2933013) Escherichia coli str. K-12 substr. MG1655 947273 b2800 CDS fucA NC_000913.3 2933041 2933688 R L-fuculose-1-phosphate aldolase complement(2933041..2933688) Escherichia coli str. K-12 substr. MG1655 947282 b2801 CDS fucP NC_000913.3 2934235 2935551 D fucose permease; L-fucose transporter 2934235..2935551 Escherichia coli str. K-12 substr. MG1655 947487 b2802 CDS fucI NC_000913.3 2935584 2937359 D L-fucose isomerase 2935584..2937359 Escherichia coli str. K-12 substr. MG1655 946195 b2803 CDS fucK NC_000913.3 2937468 2938886 D L-fuculokinase 2937468..2938886 Escherichia coli str. K-12 substr. MG1655 946022 b2804 CDS fucU NC_000913.3 2938888 2939310 D protein of fucose operon; L-fucose mutarotase 2938888..2939310 Escherichia coli str. K-12 substr. MG1655 945842 b2805 CDS fucR NC_000913.3 2939368 2940099 D positive regulator of the fuc operon; l-fucose operon activator 2939368..2940099 Escherichia coli str. K-12 substr. MG1655 946905 b2806 CDS rlmM NC_000913.3 2940143 2941243 R 23S rRNA C2498 2'-O-ribose methyltransferase, SAM-dependent complement(2940143..2941243) Escherichia coli str. K-12 substr. MG1655 947283 b2807 CDS ygdD NC_000913.3 2941236 2941631 R UPF0382 family inner membrane protein complement(2941236..2941631) Escherichia coli str. K-12 substr. MG1655 947279 b2808 CDS gcvA NC_000913.3 2941650 2942567 R positive regulator of gcv operon; glycine cleavage system transcriptional activator; autorepressor complement(2941650..2942567) Escherichia coli str. K-12 substr. MG1655 947278 b2809 CDS ygdI NC_000913.3 2942918 2943145 R DUF903 family verified lipoprotein complement(2942918..2943145) Escherichia coli str. K-12 substr. MG1655 947276 b2810 CDS csdA NC_000913.3 2943337 2944542 D cysteine sulfinate desulfinase 2943337..2944542 Escherichia coli str. K-12 substr. MG1655 947275 b2811 CDS csdE NC_000913.3 2944542 2944985 D CsdA-binding activator; Fe-S protein 2944542..2944985 Escherichia coli str. K-12 substr. MG1655 947274 b2812 CDS tcdA NC_000913.3 2945036 2945842 R putative enzyme; tRNA threonylcarbamoyladenosine dehydratase; sulfur acceptor for CsdA complement(2945036..2945842) Escherichia coli str. K-12 substr. MG1655 947291 b2813 CDS mltA NC_000913.3 2946081 2947178 R membrane-bound lytic murein transglycosylase A complement(2946081..2947178) Escherichia coli str. K-12 substr. MG1655 944964 b2817 CDS amiC NC_000913.3 2947757 2949010 R N-acetylmuramoyl-L-alanine amidase complement(2947757..2949010) Escherichia coli str. K-12 substr. MG1655 947293 b2818 CDS argA NC_000913.3 2949242 2950573 D N-acetylglutamate synthase; amino acid acetyltransferase; amino acid N-acetyltransferase and inactive acetylglutamate kinase 2949242..2950573 Escherichia coli str. K-12 substr. MG1655 947289 b2819 CDS recD NC_000913.3 2950635 2952461 R DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease; exonuclease V (RecBCD complex), alpha chain complement(2950635..2952461) Escherichia coli str. K-12 substr. MG1655 947287 b2820 CDS recB NC_000913.3 2952461 2956003 R DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease; exonuclease V (RecBCD complex), beta subunit complement(2952461..2956003) Escherichia coli str. K-12 substr. MG1655 947286 b2821 CDS ptrA NC_000913.3 2955996 2958884 R protease III complement(2955996..2958884) Escherichia coli str. K-12 substr. MG1655 947284 b2822 CDS recC NC_000913.3 2959060 2962428 R DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease; exonuclease V (RecBCD complex), gamma chain complement(2959060..2962428) Escherichia coli str. K-12 substr. MG1655 947294 b2823 CDS ppdC NC_000913.3 2962441 2962764 R prepilin peptidase dependent protein C; putative prepilin peptidase-dependent protein complement(2962441..2962764) Escherichia coli str. K-12 substr. MG1655 945797 b2824 CDS ygdB NC_000913.3 2962749 2963156 R DUF2509 family protein complement(2962749..2963156) Escherichia coli str. K-12 substr. MG1655 944763 b2825 CDS ppdB NC_000913.3 2963153 2963716 R prepilin peptidase dependent protein B; putative prepilin peptidase-dependent protein complement(2963153..2963716) Escherichia coli str. K-12 substr. MG1655 948985 b2826 CDS ppdA NC_000913.3 2963707 2964177 R prepilin peptidase dependent protein A; putative prepilin peptidase-dependent protein complement(2963707..2964177) Escherichia coli str. K-12 substr. MG1655 945393 b2827 CDS thyA NC_000913.3 2964361 2965155 R thymidylate synthetase complement(2964361..2965155) Escherichia coli str. K-12 substr. MG1655 949035 b2828 CDS lgt NC_000913.3 2965162 2966037 R phosphatidylglycerol-prolipoprotein diacylglyceryl transferase; a major membrane phospholipid; phosphatidylglycerol-prolipoprotein diacylglyceryl transferase complement(2965162..2966037) Escherichia coli str. K-12 substr. MG1655 947303 b2829 CDS ptsP NC_000913.3 2966188 2968434 R PTS system, enzyme I, transcriptional regulator (with NPR and NTR proteins); PEP-protein phosphotransferase enzyme I; GAF domain containing protein complement(2966188..2968434) Escherichia coli str. K-12 substr. MG1655 947301 b2830 CDS rppH NC_000913.3 2968447 2968977 R putative invasion protein; RNA pyrophosphohydrolase complement(2968447..2968977) Escherichia coli str. K-12 substr. MG1655 947300 b2831 CDS mutH NC_000913.3 2969662 2970351 D methyl-directed mismatch repair; methyl-directed mismatch repair protein 2969662..2970351 Escherichia coli str. K-12 substr. MG1655 947299 b2832 CDS ygdQ NC_000913.3 2970420 2971133 D putative transport protein; UPF0053 family inner membrane protein 2970420..2971133 Escherichia coli str. K-12 substr. MG1655 947295 b2833 CDS ygdR NC_000913.3 2971271 2971489 D DUF903 family verified lipoprotein 2971271..2971489 Escherichia coli str. K-12 substr. MG1655 947304 b2834 CDS tas NC_000913.3 2971597 2972637 D putative NADP(H)-dependent aldo-keto reductase 2971597..2972637 Escherichia coli str. K-12 substr. MG1655 947306 b2835 CDS lplT NC_000913.3 2972669 2973862 R putative resistance proteins; lysophospholipid transporter complement(2972669..2973862) Escherichia coli str. K-12 substr. MG1655 947317 b2836 CDS aas NC_000913.3 2973855 2976014 R 2-acyl-glycerophospho-ethanolamine acyltransferase; acyl-acyl-carrier protein synthetase; fused 2-acylglycerophospho-ethanolamine acyl transferase/acyl-acyl carrier protein synthetase complement(2973855..2976014) Escherichia coli str. K-12 substr. MG1655 947315 b2837 CDS galR NC_000913.3 2976599 2977630 D repressor of galETK operon; galactose-inducible d-galactose regulon transcriptional repressor; autorepressor 2976599..2977630 Escherichia coli str. K-12 substr. MG1655 947314 b2838 CDS lysA NC_000913.3 2977637 2978899 R diaminopimelate decarboxylase; diaminopimelate decarboxylase, PLP-binding complement(2977637..2978899) Escherichia coli str. K-12 substr. MG1655 947313 b2839 CDS lysR NC_000913.3 2979021 2979956 D positive regulator for lys; transcriptional activator of lysA; autorepressor 2979021..2979956 Escherichia coli str. K-12 substr. MG1655 947311 b2840 CDS ygeA NC_000913.3 2979943 2980635 R putative resistance proteins; Asp/Glu_racemase family protein complement(2979943..2980635) Escherichia coli str. K-12 substr. MG1655 947348 b2841 CDS araE NC_000913.3 2980764 2982182 R low-affinity L-arabinose transport system proton symport protein; arabinose transporter complement(2980764..2982182) Escherichia coli str. K-12 substr. MG1655 947341 b2842 CDS kduD NC_000913.3 2982497 2983258 R 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase; KDG oxidoreductase; 20-ketosteroid reductase complement(2982497..2983258) Escherichia coli str. K-12 substr. MG1655 947323 b2843 CDS kduI NC_000913.3 2983288 2984124 R homolog of pectin degrading enzyme 5-keto 4-deoxyuronate isomerase; hexuronate isomerase complement(2983288..2984124) Escherichia coli str. K-12 substr. MG1655 947319 b2844 CDS yqeF NC_000913.3 2984411 2985592 R putative acyltransferase; short chain acyltransferase complement(2984411..2985592) Escherichia coli str. K-12 substr. MG1655 947324 b2845 CDS yqeG NC_000913.3 2985847 2987076 D putative transporter protein; putative transporter 2985847..2987076 Escherichia coli str. K-12 substr. MG1655 945028 b2846 CDS yqeH NC_000913.3 2987536 2988168 D putative LuxR family transcriptional regulator 2987536..2988168 Escherichia coli str. K-12 substr. MG1655 945263 b2847 CDS yqeI NC_000913.3 2988502 2989311 D putative sensory transducer; putative transcriptional regulator 2988502..2989311 Escherichia coli str. K-12 substr. MG1655 947327 b2848 CDS yqeJ NC_000913.3 2989304 2989786 D uncharacterized protein 2989304..2989786 Escherichia coli str. K-12 substr. MG1655 947328 b4683 CDS yqeL NC_000913.3 2989819 2989899 R uncharacterized protein complement(2989819..2989899) Escherichia coli str. K-12 substr. MG1655 7751637 b2849 CDS yqeK NC_000913.3 2989935 2990360 R uncharacterized protein complement(2989935..2990360) Escherichia coli str. K-12 substr. MG1655 947329 b2850 CDS ygeF NC_000913.3 2990554 2991043 D pseudogene; <NA> join(2990554..2990949,2990948..2991043) Escherichia coli str. K-12 substr. MG1655 946823 b2851 CDS ygeG NC_000913.3 2991268 2991759 D SycD-like chaperone family TPR-repeat-containing protein 2991268..2991759 Escherichia coli str. K-12 substr. MG1655 946986 b2852 CDS ygeH NC_000913.3 2992094 2993470 D putative invasion protein; putative transcriptional regulator 2992094..2993470 Escherichia coli str. K-12 substr. MG1655 946265 b2853 CDS ygeI NC_000913.3 2993638 2993856 D uncharacterized protein 2993638..2993856 Escherichia coli str. K-12 substr. MG1655 947336 b2854 CDS pbl NC_000913.3 2993939 2994441 D pseudogene, peptidoglycan-binding enzyme family; <NA> join(2993939..2994382,2994382..2994441) Escherichia coli str. K-12 substr. MG1655 947338 b2856 CDS ygeK NC_000913.3 2994460 2995092 R pseudogene, response regulator family, part of T3SS PAI ETT2 remnant; putative 2-component transcriptional regulator; <NA> complement(2994460..2995092) Escherichia coli str. K-12 substr. MG1655 947332 b2858 CDS ygeN NC_000913.3 2995314 2996020 R pseudogene, orgB family, part of T3SS PAI ETT2 remnant; <NA> complement(join(2995314..2995760,2995760..2996020)) Escherichia coli str. K-12 substr. MG1655 2847705 b2859 CDS ygeO NC_000913.3 2995962 2996360 R pseudogene, orgA family, part of T3SS PAI ETT2 remnant; <NA> complement(2995962..2996360) Escherichia coli str. K-12 substr. MG1655 947325 b2860 CDS insD1 NC_000913.3 2996372 2997277 R IS2 transposase TnpB complement(2996372..2997277) Escherichia coli str. K-12 substr. MG1655 947346 b2861 CDS insC1 NC_000913.3 2997235 2997600 R IS2 repressor TnpA complement(2997235..2997600) Escherichia coli str. K-12 substr. MG1655 947347 b2863 CDS ygeQ NC_000913.3 2997692 2998828 R pseudogene, glycosyl hydrolase family 15, part of T3SS PAI ETT2 remnant; <NA> complement(2997692..2998828) Escherichia coli str. K-12 substr. MG1655 947344 b2865 CDS ygeR NC_000913.3 2999136 2999891 R putative lipoprotein; LysM domain-containing M23 family putative peptidase; septation lipoprotein complement(2999136..2999891) Escherichia coli str. K-12 substr. MG1655 947352 b2866 CDS xdhA NC_000913.3 3000345 3002603 D xanthine dehydrogenase, molybdenum binding subunit 3000345..3002603 Escherichia coli str. K-12 substr. MG1655 947116 b2867 CDS xdhB NC_000913.3 3002614 3003492 D xanthine dehydrogenase, FAD-binding subunit 3002614..3003492 Escherichia coli str. K-12 substr. MG1655 947205 b2868 CDS xdhC NC_000913.3 3003489 3003968 D xanthine dehydrogenase, Fe-S binding subunit 3003489..3003968 Escherichia coli str. K-12 substr. MG1655 945148 b2869 CDS ygeV NC_000913.3 3004008 3005786 R putative transcriptional regulator; putative sigma-54-interacting transcriptional activator complement(3004008..3005786) Escherichia coli str. K-12 substr. MG1655 947320 b2870 CDS ygeW NC_000913.3 3006262 3007452 D putative carbamoyl transferase; putative carbamoyltransferase 3006262..3007452 Escherichia coli str. K-12 substr. MG1655 945826 b2871 CDS ygeX NC_000913.3 3007510 3008706 D putative diaminopropionate ammonia-lyase; 2,3-diaminopropionate ammonia lyase, PLP-dependent 3007510..3008706 Escherichia coli str. K-12 substr. MG1655 947012 b2872 CDS ygeY NC_000913.3 3008764 3009975 D putative deacetylase; putative peptidase 3008764..3009975 Escherichia coli str. K-12 substr. MG1655 947360 b2873 CDS hyuA NC_000913.3 3010028 3011413 D D-stereospecific phenylhydantoinase 3010028..3011413 Escherichia coli str. K-12 substr. MG1655 947359 b2874 CDS yqeA NC_000913.3 3011461 3012393 D putative kinase; putative amino acid kinase 3011461..3012393 Escherichia coli str. K-12 substr. MG1655 947358 b2875 CDS yqeB NC_000913.3 3012614 3014239 R putative synthases; XdhC-CoxI family protein with NAD(P)-binding Rossman fold complement(3012614..3014239) Escherichia coli str. K-12 substr. MG1655 947357 b2876 CDS yqeC NC_000913.3 3014287 3015057 R putative selenium-dependent hydroxylase accessory protein complement(3014287..3015057) Escherichia coli str. K-12 substr. MG1655 947350 b2877 CDS mocA NC_000913.3 3015160 3015738 D CTP:molybdopterin cytidylyltransferase 3015160..3015738 Escherichia coli str. K-12 substr. MG1655 947356 b2878 CDS ygfK NC_000913.3 3016060 3019158 D putative oxidoreductase, Fe-S subunit; putative Fe-S subunit oxidoreductase subunit 3016060..3019158 Escherichia coli str. K-12 substr. MG1655 949068 b2879 CDS ssnA NC_000913.3 3019161 3020489 D putative chlorohydrolase/aminohydrolase 3019161..3020489 Escherichia coli str. K-12 substr. MG1655 949072 b2880 CDS ygfM NC_000913.3 3020540 3021319 D putative oxidoreductase 3020540..3021319 Escherichia coli str. K-12 substr. MG1655 949071 b2881 CDS xdhD NC_000913.3 3021316 3024186 D putative hypoxanthine oxidase, molybdopterin-binding/Fe-S binding 3021316..3024186 Escherichia coli str. K-12 substr. MG1655 949079 b2882 CDS xanQ NC_000913.3 3024351 3025751 D xanthine permease 3024351..3025751 Escherichia coli str. K-12 substr. MG1655 949075 b2883 CDS guaD NC_000913.3 3025766 3027085 D guanine deaminase 3025766..3027085 Escherichia coli str. K-12 substr. MG1655 947366 b4464 CDS ghxQ NC_000913.3 3027121 3028488 D guanine/hypoxanthine permease, high affinity; guanine/hypoxanthine:H+ symporter 3027121..3028488 Escherichia coli str. K-12 substr. MG1655 2847748 b2886 CDS ygfS NC_000913.3 3028524 3029012 R putative oxidoreductase, Fe-S subunit; putative 4Fe-4S ferredoxin-type oxidoreductase subunit complement(3028524..3029012) Escherichia coli str. K-12 substr. MG1655 949016 b2887 CDS ygfT NC_000913.3 3029012 3030931 R putative oxidoreductase, Fe-S subunit; putative oxidoreductase, Fe-S subunit/nucleotide-binding subunit complement(3029012..3030931) Escherichia coli str. K-12 substr. MG1655 949018 b2888 CDS uacT NC_000913.3 3031367 3032815 D putative permease; uric acid permease 3031367..3032815 Escherichia coli str. K-12 substr. MG1655 949017 b4684 CDS yqfG NC_000913.3 3032817 3032942 D uncharacterized protein 3032817..3032942 Escherichia coli str. K-12 substr. MG1655 7751638 b2889 CDS idi NC_000913.3 3033065 3033613 D isopentenyl diphosphate isomerase 3033065..3033613 Escherichia coli str. K-12 substr. MG1655 949020 b2890 CDS lysS NC_000913.3 3033657 3035174 R lysine tRNA synthetase, constitutive; suppressor of ColE1 mutation in primer RNA; lysine tRNA synthetase, constitutive complement(3033657..3035174) Escherichia coli str. K-12 substr. MG1655 947372 b2891 CDS prfB NC_000913.3 3035184 3036282 R an in-frame premature UGA termination codon is located within the prfB sequence, and a naturally occuring +1 frameshift is required for synthesis of RF-2; peptide chain release factor RF-2 complement(join(3035184..3036206,3036208..3036282)) Escherichia coli str. K-12 substr. MG1655 947369 b2892 CDS recJ NC_000913.3 3036373 3038106 R ssDNA exonuclease, 5' --> 3' specific; ssDNA exonuclease, 5' --> 3'-specific complement(3036373..3038106) Escherichia coli str. K-12 substr. MG1655 947367 b2893 CDS dsbC NC_000913.3 3038112 3038822 R protein disulfide isomerase II complement(3038112..3038822) Escherichia coli str. K-12 substr. MG1655 947363 b2894 CDS xerD NC_000913.3 3038847 3039743 R site-specific tyrosine recombinase complement(3038847..3039743) Escherichia coli str. K-12 substr. MG1655 947362 b2895 CDS fldB NC_000913.3 3039855 3040376 D flavodoxin 2 3039855..3040376 Escherichia coli str. K-12 substr. MG1655 947361 b2896 CDS cptA NC_000913.3 3040416 3040823 R toxin of CptAB toxin-antitoxin pair complement(3040416..3040823) Escherichia coli str. K-12 substr. MG1655 947379 b2897 CDS sdhE NC_000913.3 3040804 3041070 R flavinator of succinate dehydrogenase; antitoxin of CptAB toxin-antitoxin pair complement(3040804..3041070) Escherichia coli str. K-12 substr. MG1655 947382 b2898 CDS ygfZ NC_000913.3 3041313 3042293 D iron-sulfur cluster repair protein, plumbagin resistance 3041313..3042293 Escherichia coli str. K-12 substr. MG1655 947384 b2899 CDS yqfA NC_000913.3 3042489 3043148 R putative oxidoreductase; hemolysin III family HylIII inner membrane protein complement(3042489..3043148) Escherichia coli str. K-12 substr. MG1655 947381 b2900 CDS yqfB NC_000913.3 3043312 3043623 R UPF0267 family protein complement(3043312..3043623) Escherichia coli str. K-12 substr. MG1655 947380 b2901 CDS bglA NC_000913.3 3043662 3045101 D 6-phospho-beta-glucosidase A; cryptic; 6-phospho-beta-glucosidase A 3043662..3045101 Escherichia coli str. K-12 substr. MG1655 947378 b2902 CDS ygfF NC_000913.3 3045158 3045901 R putative oxidoreductase; putative NAD(P)-dependent oxidoreductase complement(3045158..3045901) Escherichia coli str. K-12 substr. MG1655 947373 b2903 CDS gcvP NC_000913.3 3046168 3049041 R glycine decarboxylase, P protein of glycine cleavage system; glycine decarboxylase, PLP-dependent, subunit P of glycine cleavage complex complement(3046168..3049041) Escherichia coli str. K-12 substr. MG1655 947394 b2904 CDS gcvH NC_000913.3 3049160 3049549 R in glycine cleavage complex, carrier of aminomethyl moiety via covalently bound lipoyl cofactor; glycine cleavage complex lipoylprotein complement(3049160..3049549) Escherichia coli str. K-12 substr. MG1655 947393 b2905 CDS gcvT NC_000913.3 3049573 3050667 R aminomethyltransferase (T protein; tetrahydrofolate-dependent) of glycine cleavage system; aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex complement(3049573..3050667) Escherichia coli str. K-12 substr. MG1655 947390 b2906 CDS ubiI NC_000913.3 3051115 3052317 R 2-octaprenylphenol hydroxylase, FAD-dependent complement(3051115..3052317) Escherichia coli str. K-12 substr. MG1655 947389 b2907 CDS ubiH NC_000913.3 3052340 3053518 R 2-octaprenyl-6-methoxyphenol--> 2-octaprenyl-6-methoxy-1, 4-benzoquinone; 2-octaprenyl-6-methoxyphenol hydroxylase, FAD/NAD(P)-binding complement(3052340..3053518) Escherichia coli str. K-12 substr. MG1655 947388 b2908 CDS pepP NC_000913.3 3053515 3054840 R proline aminopeptidase P II complement(3053515..3054840) Escherichia coli str. K-12 substr. MG1655 947385 b2909 CDS ygfB NC_000913.3 3054866 3055444 R UPF0149 family protein complement(3054866..3055444) Escherichia coli str. K-12 substr. MG1655 947400 b2910 CDS zapA NC_000913.3 3055612 3055941 D FtsZ stabilizer 3055612..3055941 Escherichia coli str. K-12 substr. MG1655 947404 b2912 CDS fau NC_000913.3 3056241 3056789 D putative ligase; 5-formyltetrahydrofolate cyclo-ligase family protein 3056241..3056789 Escherichia coli str. K-12 substr. MG1655 945167 b4665 CDS ibsC NC_000913.3 3056890 3056949 R toxic membrane protein complement(3056890..3056949) Escherichia coli str. K-12 substr. MG1655 7751627 b2913 CDS serA NC_000913.3 3057178 3058410 R D-3-phosphoglycerate dehydrogenase complement(3057178..3058410) Escherichia coli str. K-12 substr. MG1655 945258 b2914 CDS rpiA NC_000913.3 3058666 3059325 R ribosephosphate isomerase, constitutive; ribose 5-phosphate isomerase, constitutive complement(3058666..3059325) Escherichia coli str. K-12 substr. MG1655 947407 b2915 CDS yqfE NC_000913.3 3059381 3059701 R pseudogene, LysR family; <NA> complement(3059381..3059701) Escherichia coli str. K-12 substr. MG1655 946707 b2916 CDS argP NC_000913.3 3059753 3060646 D replication initiation inhibitor, binds to 13-mers at oriC; transcriptional regulator for arginine transport and DNA replication genes; replication initiation inhibitor 3059753..3060646 Escherichia coli str. K-12 substr. MG1655 944867 b2917 CDS scpA NC_000913.3 3060850 3062994 D methylmalonyl-CoA mutase (MCM); methylmalonyl-CoA mutase 3060850..3062994 Escherichia coli str. K-12 substr. MG1655 945576 b2918 CDS argK NC_000913.3 3062987 3063982 D membrane ATPase/protein kinase 3062987..3063982 Escherichia coli str. K-12 substr. MG1655 947412 b2919 CDS scpB NC_000913.3 3063993 3064778 D putative enzyme; methylmalonyl-CoA decarboxylase, biotin-independent 3063993..3064778 Escherichia coli str. K-12 substr. MG1655 947408 b2920 CDS scpC NC_000913.3 3064802 3066280 D putative coenzyme A transferase; propionyl-CoA:succinate CoA transferase 3064802..3066280 Escherichia coli str. K-12 substr. MG1655 947402 b2921 CDS ygfI NC_000913.3 3066277 3067173 R putative transcriptional regulator LYSR-type; putative DNA-binding transcriptional regulator complement(3066277..3067173) Escherichia coli str. K-12 substr. MG1655 947401 b2922 CDS yggE NC_000913.3 3067340 3068080 R putative actin; oxidative stress defense protein complement(3067340..3068080) Escherichia coli str. K-12 substr. MG1655 947398 b2923 CDS argO NC_000913.3 3068173 3068808 R arginine transporter complement(3068173..3068808) Escherichia coli str. K-12 substr. MG1655 947418 b2924 CDS mscS NC_000913.3 3068947 3069807 R mechanosensitive channel protein, small conductance complement(3068947..3069807) Escherichia coli str. K-12 substr. MG1655 947416 b2925 CDS fbaA NC_000913.3 3070165 3071244 R fructose-bisphosphate aldolase, class II complement(3070165..3071244) Escherichia coli str. K-12 substr. MG1655 947415 b2926 CDS pgk NC_000913.3 3071459 3072622 R phosphoglycerate kinase complement(3071459..3072622) Escherichia coli str. K-12 substr. MG1655 947414 b2927 CDS epd NC_000913.3 3072672 3073691 R D-erythrose 4-phosphate dehydrogenase complement(3072672..3073691) Escherichia coli str. K-12 substr. MG1655 947413 b2928 CDS yggC NC_000913.3 3073976 3074689 R putative kinase; putative PanK family P-loop kinase complement(3073976..3074689) Escherichia coli str. K-12 substr. MG1655 947419 b2929 CDS yggD NC_000913.3 3074686 3075195 R putative transcriptional regulator; MtlR family putative transcriptional repressor complement(3074686..3075195) Escherichia coli str. K-12 substr. MG1655 946861 b2930 CDS yggF NC_000913.3 3075217 3076182 R fructose 1,6 bisphosphatase isozyme complement(3075217..3076182) Escherichia coli str. K-12 substr. MG1655 947410 b4465 CDS yggP NC_000913.3 3076179 3077456 R putative Zn-binding dehydrogenase complement(3076179..3077456) Escherichia coli str. K-12 substr. MG1655 2847686 b2933 CDS cmtA NC_000913.3 3077471 3078859 R PTS system, mannitol-specific enzyme II component, cryptic; putative mannitol-specific PTS IIB and IIC components complement(3077471..3078859) Escherichia coli str. K-12 substr. MG1655 945256 b2934 CDS cmtB NC_000913.3 3078887 3079330 R PTS system, mannitol-specific enzyme II component, cryptic; putative mannitol-specific enzyme IIA component of PTS complement(3078887..3079330) Escherichia coli str. K-12 substr. MG1655 945125 b2935 CDS tktA NC_000913.3 3079644 3081635 R transketolase 1 isozyme; transketolase 1, thiamine triphosphate-binding complement(3079644..3081635) Escherichia coli str. K-12 substr. MG1655 947420 b2936 CDS loiP NC_000913.3 3081913 3082671 D Phe-Phe periplasmic metalloprotease, OM lipoprotein; low salt-inducible; Era-binding heat shock protein 3081913..3082671 Escherichia coli str. K-12 substr. MG1655 945173 b2937 CDS speB NC_000913.3 3082877 3083797 R agmatinase complement(3082877..3083797) Escherichia coli str. K-12 substr. MG1655 947715 b2938 CDS speA NC_000913.3 3083935 3085911 R biosynthetic arginine decarboxylase; biosynthetic arginine decarboxylase, PLP-binding complement(3083935..3085911) Escherichia coli str. K-12 substr. MG1655 947432 b2939 CDS yqgB NC_000913.3 3085920 3086051 R uncharacterized protein complement(3085920..3086051) Escherichia coli str. K-12 substr. MG1655 947433 b2940 CDS yqgC NC_000913.3 3086187 3086402 D uncharacterized protein 3086187..3086402 Escherichia coli str. K-12 substr. MG1655 945052 b2942 CDS metK NC_000913.3 3086706 3087860 D methionine adenosyltransferase 1 (AdoMet synthetase); methyl and propylamine donor, corepressor of met genes; S-adenosylmethionine synthetase 3086706..3087860 Escherichia coli str. K-12 substr. MG1655 945389 b2943 CDS galP NC_000913.3 3088284 3089678 D galactose-proton symport of transport system; D-galactose transporter 3088284..3089678 Escherichia coli str. K-12 substr. MG1655 947434 b2944 CDS yggI NC_000913.3 3089755 3090252 D Zn-dependent metalloprotease-related protein 3089755..3090252 Escherichia coli str. K-12 substr. MG1655 947443 b2945 CDS endA NC_000913.3 3090347 3091054 D DNA-specific endonuclease I 3090347..3091054 Escherichia coli str. K-12 substr. MG1655 949092 b2946 CDS rsmE NC_000913.3 3091134 3091865 D 16S rRNA m(3)U1498 methyltransferase, SAM-dependent 3091134..3091865 Escherichia coli str. K-12 substr. MG1655 945816 b2947 CDS gshB NC_000913.3 3091878 3092828 D glutathione synthetase 3091878..3092828 Escherichia coli str. K-12 substr. MG1655 947445 b2948 CDS yqgE NC_000913.3 3092937 3093500 D uncharacterized protein 3092937..3093500 Escherichia coli str. K-12 substr. MG1655 947442 b2949 CDS yqgF NC_000913.3 3093500 3093916 D putative Holliday junction resolvase 3093500..3093916 Escherichia coli str. K-12 substr. MG1655 947439 b2950 CDS yggR NC_000913.3 3094100 3095080 R putative protein transport; putative PilT family AAA+ ATPase complement(3094100..3095080) Escherichia coli str. K-12 substr. MG1655 947430 b2951 CDS yggS NC_000913.3 3095098 3095802 D UPF0001 family protein, PLP-binding 3095098..3095802 Escherichia coli str. K-12 substr. MG1655 947423 b2952 CDS yggT NC_000913.3 3095820 3096386 D conserved hypothetical integral membrane protein; putative inner membrane protein; compensates for loss in K+ uptake 3095820..3096386 Escherichia coli str. K-12 substr. MG1655 947421 b2953 CDS yggU NC_000913.3 3096383 3096673 D UPF0235 family protein 3096383..3096673 Escherichia coli str. K-12 substr. MG1655 947424 b2954 CDS rdgB NC_000913.3 3096681 3097274 D putative ribosomal protein; dITP/XTP pyrophosphatase 3096681..3097274 Escherichia coli str. K-12 substr. MG1655 947429 b2955 CDS yggW NC_000913.3 3097267 3098403 D putative oxidase; HemN family putative oxidoreductase 3097267..3098403 Escherichia coli str. K-12 substr. MG1655 947446 b2956 CDS yggM NC_000913.3 3098558 3099565 R putative alpha helix chain; DUF1202 family putative secreted protein complement(3098558..3099565) Escherichia coli str. K-12 substr. MG1655 947455 b2957 CDS ansB NC_000913.3 3099682 3100728 R periplasmic L-asparaginase 2 complement(3099682..3100728) Escherichia coli str. K-12 substr. MG1655 947454 b2958 CDS yggN NC_000913.3 3100904 3101623 R DUF2884 family putative periplasmic protein complement(3100904..3101623) Escherichia coli str. K-12 substr. MG1655 947453 b2959 CDS yggL NC_000913.3 3101807 3102133 R DUF469 family protein complement(3101807..3102133) Escherichia coli str. K-12 substr. MG1655 947449 b2960 CDS trmI NC_000913.3 3102133 3102852 R tRNA m(7)G46 methyltransferase, SAM-dependent complement(3102133..3102852) Escherichia coli str. K-12 substr. MG1655 947448 b2961 CDS mutY NC_000913.3 3103013 3104065 D adenine glycosylase; G.C --> T.A transversions; adenine DNA glycosylase 3103013..3104065 Escherichia coli str. K-12 substr. MG1655 947447 b2962 CDS yggX NC_000913.3 3104093 3104368 D oxidative damage protective factor for iron-sulfur proteins 3104093..3104368 Escherichia coli str. K-12 substr. MG1655 947461 b2963 CDS mltC NC_000913.3 3104433 3105512 D membrane-bound lytic murein transglycosylase C 3104433..3105512 Escherichia coli str. K-12 substr. MG1655 945428 b2964 CDS nupG NC_000913.3 3105714 3106970 D transport of nucleosides, permease protein; nucleoside transporter 3105714..3106970 Escherichia coli str. K-12 substr. MG1655 946282 b2965 CDS speC NC_000913.3 3107020 3109155 R ornithine decarboxylase isozyme; ornithine decarboxylase, constitutive complement(3107020..3109155) Escherichia coli str. K-12 substr. MG1655 947457 b2966 CDS yqgA NC_000913.3 3109553 3110260 D putative transport protein; DUF554 family putative inner membrane protein 3109553..3110260 Escherichia coli str. K-12 substr. MG1655 947462 b2968 CDS yghD NC_000913.3 3110590 3111126 R putative secretion pathway protein; putative membrane-anchored secretion pathway M-type protein complement(3110590..3111126) Escherichia coli str. K-12 substr. MG1655 947025 b2969 CDS yghE NC_000913.3 3111128 3112090 R pseudogene, secretion pathway protein, L-type protein homology; putative general secretion pathway for protein export (GSP); <NA> complement(3111128..3112090) Escherichia coli str. K-12 substr. MG1655 945897 b2970 CDS yghF NC_000913.3 3112093 3112941 R pseudogene, secretion pathway protein, C-type protein homology;putative transport; Not classified; putative general secretion pathway for protein export (GSP); <NA> complement(3112093..3112941) Escherichia coli str. K-12 substr. MG1655 947469 b2971 CDS yghG NC_000913.3 3113067 3113477 R secretin (GspDbeta) OM localization lipoprotein pilotin complement(3113067..3113477) Escherichia coli str. K-12 substr. MG1655 947470 b2972 CDS pppA NC_000913.3 3113543 3114352 R bifunctional prepilin leader peptidase/ methylase complement(3113543..3114352) Escherichia coli str. K-12 substr. MG1655 947467 b4466 CDS sslE NC_000913.3 3114550 3119112 R putative lipoprotein; putative secreted and surface-associated lipoprotein mucinase complement(3114550..3119112) Escherichia coli str. K-12 substr. MG1655 2847716 b2975 CDS glcA NC_000913.3 3119597 3121279 R putative permease; glycolate transporter complement(3119597..3121279) Escherichia coli str. K-12 substr. MG1655 947259 b2976 CDS glcB NC_000913.3 3121634 3123805 R malate synthase G complement(3121634..3123805) Escherichia coli str. K-12 substr. MG1655 948857 b2977 CDS glcG NC_000913.3 3123827 3124231 R DUF336 family protein complement(3123827..3124231) Escherichia coli str. K-12 substr. MG1655 947473 b4467 CDS glcF NC_000913.3 3124236 3125459 R glycolate oxidase 4Fe-4S iron-sulfur cluster subunit complement(3124236..3125459) Escherichia coli str. K-12 substr. MG1655 2847717 b4468 CDS glcE NC_000913.3 3125470 3126522 R glycolate oxidase iron-sulfur subunit; glycolate oxidase FAD binding subunit complement(3125470..3126522) Escherichia coli str. K-12 substr. MG1655 2847718 b2979 CDS glcD NC_000913.3 3126522 3128021 R glycolate oxidase subunit D; glycolate oxidase subunit, FAD-linked complement(3126522..3128021) Escherichia coli str. K-12 substr. MG1655 947353 b2980 CDS glcC NC_000913.3 3128272 3129036 D transcriptional activator for glc operon; glycolate-inducible glc operon transcriptional repressor; autorepressor 3128272..3129036 Escherichia coli str. K-12 substr. MG1655 947466 b2981 CDS yghO NC_000913.3 3129043 3130143 R pseudogene, IS-interrupted; <NA> complement(3129043..3130143) Escherichia coli str. K-12 substr. MG1655 947701 b2982 CDS insH1 NC_000913.3 3130178 3131194 D IS5 transposase and trans-activator 3130178..3131194 Escherichia coli str. K-12 substr. MG1655 947516 b2983 CDS yghQ NC_000913.3 3131341 3132408 R putative inner membrane polysaccharide flippase complement(3131341..3132408) Escherichia coli str. K-12 substr. MG1655 947716 b2984 CDS yghR NC_000913.3 3132454 3133212 R putative ATP-binding protein complement(3132454..3133212) Escherichia coli str. K-12 substr. MG1655 947310 b2985 CDS yghS NC_000913.3 3133244 3133957 R putative ATP-binding protein complement(3133244..3133957) Escherichia coli str. K-12 substr. MG1655 947476 b2986 CDS yghT NC_000913.3 3134131 3134823 D putative ATP-binding protein 3134131..3134823 Escherichia coli str. K-12 substr. MG1655 947477 b2987 CDS pitB NC_000913.3 3134872 3136371 R low-affinity phosphate transport; phosphate transporter complement(3134872..3136371) Escherichia coli str. K-12 substr. MG1655 947475 b2988 CDS gss NC_000913.3 3136663 3138522 R glutathionylspermidine synthetase/amidase; glutathionylspermidine amidase and glutathionylspermidine synthetase complement(3136663..3138522) Escherichia coli str. K-12 substr. MG1655 947474 b2989 CDS yghU NC_000913.3 3138727 3139593 D putative S-transferase 3138727..3139593 Escherichia coli str. K-12 substr. MG1655 947472 b2990 CDS hybG NC_000913.3 3139716 3139964 R hydrogenase-2 operon protein: may effect maturation of large subunit of hydrogenase-2; hydrogenase 2 accessory protein complement(3139716..3139964) Escherichia coli str. K-12 substr. MG1655 948020 b2991 CDS hybF NC_000913.3 3139977 3140318 R may modulate levels of hydrogenease-2; protein involved with the maturation of hydrogenases 1 and 2 complement(3139977..3140318) Escherichia coli str. K-12 substr. MG1655 948004 b2992 CDS hybE NC_000913.3 3140311 3140799 R member of hyb operon; hydrogenase 2-specific chaperone complement(3140311..3140799) Escherichia coli str. K-12 substr. MG1655 947483 b2993 CDS hybD NC_000913.3 3140792 3141286 R probable processing element for hydrogenase-2; maturation protease for hydrogenase 2 complement(3140792..3141286) Escherichia coli str. K-12 substr. MG1655 948982 b2994 CDS hybC NC_000913.3 3141286 3142989 R probable large subunit, hydrogenase-2; hydrogenase 2, large subunit complement(3141286..3142989) Escherichia coli str. K-12 substr. MG1655 945182 b2995 CDS hybB NC_000913.3 3142986 3144164 R probable cytochrome Ni/Fe component of hydrogenase-2; putative hydrogenase 2 cytochrome b type component complement(3142986..3144164) Escherichia coli str. K-12 substr. MG1655 948615 b2996 CDS hybA NC_000913.3 3144154 3145140 R hydrogenase-2 small subunit; hydrogenase 2 4Fe-4S ferredoxin-type component complement(3144154..3145140) Escherichia coli str. K-12 substr. MG1655 944842 b2997 CDS hybO NC_000913.3 3145143 3146261 R hydrogenase 2, small subunit complement(3145143..3146261) Escherichia coli str. K-12 substr. MG1655 945902 b2998 CDS yghW NC_000913.3 3146450 3146737 R DUF2623 family protein complement(3146450..3146737) Escherichia coli str. K-12 substr. MG1655 947485 b4658 CDS yghX NC_000913.3 3146856 3147691 R pseudogene, dienlactone hydrolase family; <NA> complement(join(3146856..3147272,3147272..3147691)) Escherichia coli str. K-12 substr. MG1655 2847694 b3001 CDS gpr NC_000913.3 3147897 3148937 D putative reductase; L-glyceraldehyde 3-phosphate reductase 3147897..3148937 Escherichia coli str. K-12 substr. MG1655 947480 b3002 CDS yqhA NC_000913.3 3148977 3149471 R UPF0114 family putative inner membrane protein complement(3148977..3149471) Escherichia coli str. K-12 substr. MG1655 947479 b3003 CDS yghA NC_000913.3 3149662 3150546 D putative oxidoreductase 3149662..3150546 Escherichia coli str. K-12 substr. MG1655 947478 b3005 CDS exbD NC_000913.3 3150818 3151243 R uptake of enterochelin; tonB-dependent uptake of B colicins; membrane spanning protein in TonB-ExbB-ExbD complex complement(3150818..3151243) Escherichia coli str. K-12 substr. MG1655 946345 b3006 CDS exbB NC_000913.3 3151250 3151984 R uptake of enterochelin; tonB-dependent uptake of B colicins; membrane spanning protein in TonB-ExbB-ExbD complex complement(3151250..3151984) Escherichia coli str. K-12 substr. MG1655 945420 b3008 CDS metC NC_000913.3 3152236 3153423 D cystathionine beta-lyase (beta-cystathionase); cystathionine beta-lyase, PLP-dependent 3152236..3153423 Escherichia coli str. K-12 substr. MG1655 946240 b3009 CDS yghB NC_000913.3 3153563 3154222 D general envelope maintenance protein; DedA family inner membrane protein; putative multidrug efflux transporter 3153563..3154222 Escherichia coli str. K-12 substr. MG1655 947490 b3010 CDS yqhC NC_000913.3 3154262 3155218 R putative ARAC-type regulatory protein; transcriptional activator of yqhD complement(3154262..3155218) Escherichia coli str. K-12 substr. MG1655 947491 b3011 CDS yqhD NC_000913.3 3155355 3156518 D putative oxidoreductase; aldehyde reductase, NADPH-dependent 3155355..3156518 Escherichia coli str. K-12 substr. MG1655 947493 b3012 CDS dkgA NC_000913.3 3156623 3157450 D 2,5-diketo-D-gluconate reductase A 3156623..3157450 Escherichia coli str. K-12 substr. MG1655 947495 b3013 CDS yqhG NC_000913.3 3157650 3158576 D DUF3828 family putative periplasmic protein 3157650..3158576 Escherichia coli str. K-12 substr. MG1655 945919 b3014 CDS yqhH NC_000913.3 3158627 3158884 D outer membrane lipoprotein, Lpp paralog 3158627..3158884 Escherichia coli str. K-12 substr. MG1655 946832 b4469 CDS ygiQ NC_000913.3 3158927 3161146 R Radical SAM superfamily protein complement(3158927..3161146) Escherichia coli str. K-12 substr. MG1655 948963 b3017 CDS ftsP NC_000913.3 3161257 3162669 R suppressor of ftsI; septal ring component that protects the divisome from stress; multicopy suppressor of ftsI(Ts) complement(3161257..3162669) Escherichia coli str. K-12 substr. MG1655 944982 b3018 CDS plsC NC_000913.3 3162744 3163481 R 1-acyl-sn-glycerol-3-phosphate acyltransferase complement(3162744..3163481) Escherichia coli str. K-12 substr. MG1655 947496 b3019 CDS parC NC_000913.3 3163715 3165973 R DNA topoisomerase IV subunit A; DNA topoisomerase IV, subunit A complement(3163715..3165973) Escherichia coli str. K-12 substr. MG1655 947499 b3020 CDS ygiS NC_000913.3 3166111 3167718 R putative transport periplasmic protein; putative ABC transporter permease complement(3166111..3167718) Escherichia coli str. K-12 substr. MG1655 947140 b3021 CDS mqsA NC_000913.3 3167851 3168246 R antitoxin for MqsR toxin; transcriptional repressor complement(3167851..3168246) Escherichia coli str. K-12 substr. MG1655 945814 b3022 CDS mqsR NC_000913.3 3168248 3168544 R GCU-specific mRNA interferase toxin of the MqsR-MqsA toxin-antitoxin system; biofilm/motility regulator; anti-repressor complement(3168248..3168544) Escherichia coli str. K-12 substr. MG1655 947500 b3023 CDS ygiV NC_000913.3 3168749 3169231 R transcriptional repressor for mcbR biofilm gene complement(3168749..3169231) Escherichia coli str. K-12 substr. MG1655 945805 b3024 CDS ygiW NC_000913.3 3169284 3169676 R hydrogen peroxide and cadmium resistance periplasmic protein; stress-induced OB-fold protein complement(3169284..3169676) Escherichia coli str. K-12 substr. MG1655 946051 b3025 CDS qseB NC_000913.3 3169828 3170487 D putative 2-component transcriptional regulator; quorum sensing DNA-binding response regulator in two-component regulatory system with QseC 3169828..3170487 Escherichia coli str. K-12 substr. MG1655 945369 b3026 CDS qseC NC_000913.3 3170484 3171833 D putative 2-component sensor protein; quorum sensing sensory histidine kinase in two-component regulatory system with QseB 3170484..3171833 Escherichia coli str. K-12 substr. MG1655 947174 b3027 CDS ygiZ NC_000913.3 3171879 3172211 R inner membrane protein complement(3171879..3172211) Escherichia coli str. K-12 substr. MG1655 946450 b3028 CDS mdaB NC_000913.3 3172530 3173111 D modulator of drug activity B; NADPH quinone reductase 3172530..3173111 Escherichia coli str. K-12 substr. MG1655 947512 b3029 CDS ygiN NC_000913.3 3173142 3173456 D quinol monooxygenase 3173142..3173456 Escherichia coli str. K-12 substr. MG1655 947506 b3030 CDS parE NC_000913.3 3173504 3175396 R DNA topoisomerase IV subunit B; DNA topoisomerase IV, subunit B complement(3173504..3175396) Escherichia coli str. K-12 substr. MG1655 947501 b3031 CDS yqiA NC_000913.3 3175425 3176006 R acyl CoA esterase complement(3175425..3176006) Escherichia coli str. K-12 substr. MG1655 947488 b3032 CDS cpdA NC_000913.3 3176006 3176833 R 3',5' cAMP phosphodiesterase complement(3176006..3176833) Escherichia coli str. K-12 substr. MG1655 947515 b3033 CDS yqiB NC_000913.3 3176858 3177280 R putative enzyme; DUF1249 protein YqiB complement(3176858..3177280) Escherichia coli str. K-12 substr. MG1655 947518 b3034 CDS nudF NC_000913.3 3177281 3177910 R ADP-ribose pyrophosphatase complement(3177281..3177910) Escherichia coli str. K-12 substr. MG1655 947519 b3035 CDS tolC NC_000913.3 3178115 3179596 D outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes; transport channel 3178115..3179596 Escherichia coli str. K-12 substr. MG1655 947521 b3037 CDS ygiB NC_000913.3 3179744 3180415 D DUF1190 family protein 3179744..3180415 Escherichia coli str. K-12 substr. MG1655 945086 b3038 CDS ygiC NC_000913.3 3180421 3181581 D putative synthetase/amidase; ATP-Grasp family ATPase 3180421..3181581 Escherichia coli str. K-12 substr. MG1655 947249 b3039 CDS ygiD NC_000913.3 3181619 3182407 R 4,5- DOPA-extradiol-dioxygenase complement(3181619..3182407) Escherichia coli str. K-12 substr. MG1655 946447 b3040 CDS zupT NC_000913.3 3182550 3183323 D zinc transporter 3182550..3183323 Escherichia coli str. K-12 substr. MG1655 947035 b3041 CDS ribB NC_000913.3 3183813 3184466 R 3,4 dihydroxy-2-butanone-4-phosphate synthase; 3,4-dihydroxy-2-butanone-4-phosphate synthase complement(3183813..3184466) Escherichia coli str. K-12 substr. MG1655 947526 b3042 CDS yqiC NC_000913.3 3184840 3185130 D BMFP family putative fusogenic protein 3184840..3185130 Escherichia coli str. K-12 substr. MG1655 947524 b3043 CDS ygiL NC_000913.3 3185414 3185965 D putative fimbrial-like protein; putative fimbrial-like adhesin protein 3185414..3185965 Escherichia coli str. K-12 substr. MG1655 947522 b3046 CDS yqiG NC_000913.3 3186061 3189865 D pseudogene; fimbrial export usher family;putative membrane; Not classified; putative membrane protein; <NA> join(3186061..3186090,3187427..3189865) Escherichia coli str. K-12 substr. MG1655 947529 b3044 CDS insC1 NC_000913.3 3186187 3186552 D IS2 repressor TnpA 3186187..3186552 Escherichia coli str. K-12 substr. MG1655 947520 b3045 CDS insD1 NC_000913.3 3186510 3187415 D IS2 transposase TnpB 3186510..3187415 Escherichia coli str. K-12 substr. MG1655 947517 b3047 CDS yqiH NC_000913.3 3189881 3190630 D putative membrane protein; putative periplasmic pilin chaperone 3189881..3190630 Escherichia coli str. K-12 substr. MG1655 947531 b3048 CDS yqiI NC_000913.3 3190632 3191696 D fimbrial protein 3190632..3191696 Escherichia coli str. K-12 substr. MG1655 947535 b3049 CDS glgS NC_000913.3 3191739 3191939 R glycogen biosynthesis, rpoS dependent; motility and biofilm regulator complement(3191739..3191939) Escherichia coli str. K-12 substr. MG1655 947533 b3050 CDS yqiJ NC_000913.3 3192208 3192837 D putative oxidoreductase; DUF1449 family inner membrane protein 3192208..3192837 Escherichia coli str. K-12 substr. MG1655 947530 b3051 CDS yqiK NC_000913.3 3192864 3194525 D putative membrane protein; PHB family membrane protein, function unknown 3192864..3194525 Escherichia coli str. K-12 substr. MG1655 947537 b4664 CDS ibsD NC_000913.3 3194766 3194825 D toxic membrane protein 3194766..3194825 Escherichia coli str. K-12 substr. MG1655 7751628 b4666 CDS ibsE NC_000913.3 3195141 3195200 D toxic membrane protein 3195141..3195200 Escherichia coli str. K-12 substr. MG1655 7751629 b3052 CDS hldE NC_000913.3 3195320 3196753 R heptose 7-phosphate kinase and heptose 1-phosphate adenyltransferase complement(3195320..3196753) Escherichia coli str. K-12 substr. MG1655 947548 b3053 CDS glnE NC_000913.3 3196801 3199641 R adenylylating enzyme for glutamine synthetase; fused deadenylyltransferase/adenylyltransferase for glutamine synthetase complement(3196801..3199641) Escherichia coli str. K-12 substr. MG1655 947552 b3054 CDS ygiF NC_000913.3 3199664 3200965 R inorganic triphosphatase complement(3199664..3200965) Escherichia coli str. K-12 substr. MG1655 947554 b3055 CDS ygiM NC_000913.3 3201207 3201827 D SH3 domain protein 3201207..3201827 Escherichia coli str. K-12 substr. MG1655 947555 b3056 CDS cca NC_000913.3 3201891 3203129 D tRNA nucleotidyl transferase; fused tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase and phosphatase 3201891..3203129 Escherichia coli str. K-12 substr. MG1655 947553 b3057 CDS bacA NC_000913.3 3203310 3204131 R bacitracin resistance; possibly phosphorylates undecaprenol; undecaprenyl pyrophosphate phosphatase complement(3203310..3204131) Escherichia coli str. K-12 substr. MG1655 947551 b3058 CDS folB NC_000913.3 3204221 3204589 R putative kinase; dihydroneopterin aldolase and dihydroneopterin triphosphate 2'-epimerase complement(3204221..3204589) Escherichia coli str. K-12 substr. MG1655 947544 b3059 CDS plsY NC_000913.3 3204694 3205311 D putative glycerol-3-phosphate acyltransferase 3204694..3205311 Escherichia coli str. K-12 substr. MG1655 947561 b3060 CDS ttdR NC_000913.3 3205324 3206256 R putative transcriptional regulator LYSR-type; transcriptional activator of ttdABT complement(3205324..3206256) Escherichia coli str. K-12 substr. MG1655 947562 b3061 CDS ttdA NC_000913.3 3206463 3207374 D L-tartrate dehydratase, subunit A; L-tartrate dehydratase, alpha subunit 3206463..3207374 Escherichia coli str. K-12 substr. MG1655 947565 b3062 CDS ttdB NC_000913.3 3207371 3207976 D L-tartrate dehydratase, subunit B; L-tartrate dehydratase, beta subunit 3207371..3207976 Escherichia coli str. K-12 substr. MG1655 947568 b3063 CDS ttdT NC_000913.3 3208024 3209487 D L-tartrate/succinate antiporte 3208024..3209487 Escherichia coli str. K-12 substr. MG1655 947576 b3064 CDS tsaD NC_000913.3 3209530 3210543 R putative O-sialoglycoprotein endopeptidase; tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein; glycation binding protein complement(3209530..3210543) Escherichia coli str. K-12 substr. MG1655 947578 b3065 CDS rpsU NC_000913.3 3210781 3210996 D 30S ribosomal subunit protein S21 3210781..3210996 Escherichia coli str. K-12 substr. MG1655 947577 b3066 CDS dnaG NC_000913.3 3211107 3212852 D DNA biosynthesis; DNA primase; DNA primase 3211107..3212852 Escherichia coli str. K-12 substr. MG1655 947570 b3067 CDS rpoD NC_000913.3 3213047 3214888 D RNA polymerase, sigma(70) factor; regulation of proteins induced at high temperatures; RNA polymerase, sigma 70 (sigma D) factor 3213047..3214888 Escherichia coli str. K-12 substr. MG1655 947567 b3068 CDS mug NC_000913.3 3214967 3215473 R G/U mismatch-specific DNA glycosylase; xanthine DNA glycosylase complement(3214967..3215473) Escherichia coli str. K-12 substr. MG1655 947560 b3070 CDS yqjH NC_000913.3 3215727 3216491 R putative siderophore interacting protein complement(3215727..3216491) Escherichia coli str. K-12 substr. MG1655 947582 b3071 CDS yqjI NC_000913.3 3216779 3217402 D PadR family putative transcriptional regulator 3216779..3217402 Escherichia coli str. K-12 substr. MG1655 947584 b3072 CDS aer NC_000913.3 3217556 3219076 R aerotaxis sensor receptor, flavoprotein; fused signal transducer for aerotaxis sensory component/methyl accepting chemotaxis component complement(3217556..3219076) Escherichia coli str. K-12 substr. MG1655 945301 b3073 CDS patA NC_000913.3 3219494 3220873 D probable ornithine aminotransferase; putrescine:2-oxoglutaric acid aminotransferase, PLP-dependent 3219494..3220873 Escherichia coli str. K-12 substr. MG1655 947120 b3074 CDS ygjH NC_000913.3 3220915 3221247 R putative tRNA synthetase; putative tRNA binding protein; putative tRNA corner chaperone complement(3220915..3221247) Escherichia coli str. K-12 substr. MG1655 946251 b3075 CDS ebgR NC_000913.3 3221466 3222449 D regulator of ebg operon; transcriptional repressor 3221466..3222449 Escherichia coli str. K-12 substr. MG1655 947586 b3076 CDS ebgA NC_000913.3 3222633 3225725 D evolved beta-D-galactosidase, alpha subunit; cryptic gene; evolved beta-D-galactosidase, alpha subunit 3222633..3225725 Escherichia coli str. K-12 substr. MG1655 947583 b3077 CDS ebgC NC_000913.3 3225722 3226171 D evolved beta-D-galactosidase, beta subunit; cryptic gene; evolved beta-D-galactosidase, beta subunit; cupin superfamily 3225722..3226171 Escherichia coli str. K-12 substr. MG1655 947581 b3078 CDS ygjI NC_000913.3 3226234 3227667 D putative oxidoreductase; putative transporter 3226234..3227667 Escherichia coli str. K-12 substr. MG1655 947579 b3079 CDS ygjJ NC_000913.3 3227801 3228871 D putative periplasmic protein 3227801..3228871 Escherichia coli str. K-12 substr. MG1655 947597 b3080 CDS ygjK NC_000913.3 3228888 3231239 D putative isomerase; alpha-glucosidase 3228888..3231239 Escherichia coli str. K-12 substr. MG1655 947596 b3081 CDS fadH NC_000913.3 3231665 3233683 D 2,4-dienoyl-CoA reductase, NADH and FMN-linked 3231665..3233683 Escherichia coli str. K-12 substr. MG1655 947594 b3082 CDS higA NC_000913.3 3233728 3234144 R antitoxinof the HigB-HigA toxin-antitoxin system complement(3233728..3234144) Escherichia coli str. K-12 substr. MG1655 947593 b3083 CDS higB NC_000913.3 3234141 3234455 R mRNA interferase toxin of the HigB-HigA toxin-antitoxin system complement(3234141..3234455) Escherichia coli str. K-12 substr. MG1655 947591 b3084 CDS rlmG NC_000913.3 3234739 3235875 R putative enzyme; 23S rRNA m(2)G1835 methyltransferase, SAM-dependent complement(3234739..3235875) Escherichia coli str. K-12 substr. MG1655 947589 b3085 CDS ygjP NC_000913.3 3235960 3236463 D putative metal dependent hydrolase 3235960..3236463 Escherichia coli str. K-12 substr. MG1655 947650 b3086 CDS ygjQ NC_000913.3 3236540 3237232 D DUF218 superfamily protein 3236540..3237232 Escherichia coli str. K-12 substr. MG1655 947598 b3087 CDS ygjR NC_000913.3 3237311 3238297 D putative NAD(P)-dependent dehydrogenase 3237311..3238297 Escherichia coli str. K-12 substr. MG1655 947600 b3088 CDS alx NC_000913.3 3238580 3239545 D putative transport protein; putative membrane-bound redox modulator 3238580..3239545 Escherichia coli str. K-12 substr. MG1655 947607 b3089 CDS sstT NC_000913.3 3239944 3241188 D putative transport protein; sodium:serine/threonine symporter 3239944..3241188 Escherichia coli str. K-12 substr. MG1655 947605 b3090 CDS ygjV NC_000913.3 3241193 3241744 R Imp-YgjV family inner membrane protein complement(3241193..3241744) Escherichia coli str. K-12 substr. MG1655 947604 b3091 CDS uxaA NC_000913.3 3241827 3243314 R altronate hydrolase complement(3241827..3243314) Escherichia coli str. K-12 substr. MG1655 947603 b3092 CDS uxaC NC_000913.3 3243329 3244741 R uronate isomerase complement(3243329..3244741) Escherichia coli str. K-12 substr. MG1655 947599 b3093 CDS exuT NC_000913.3 3245224 3246522 D transport of hexuronates; hexuronate transporter 3245224..3246522 Escherichia coli str. K-12 substr. MG1655 947601 b3094 CDS exuR NC_000913.3 3246652 3247428 D negative regulator of exu regulon, exuT, uxaAC, and uxuB; hexuronate regulon transcriptional repressor; autorepressor 3246652..3247428 Escherichia coli str. K-12 substr. MG1655 947602 b3095 CDS yqjA NC_000913.3 3247773 3248435 D general envelope maintenance protein; DedA family inner membrane protein; putative multidrug efflux transporter 3247773..3248435 Escherichia coli str. K-12 substr. MG1655 947643 b3096 CDS mzrA NC_000913.3 3248439 3248822 D modulator of EnvZ/OmpR regulon 3248439..3248822 Escherichia coli str. K-12 substr. MG1655 947619 b3097 CDS yqjC NC_000913.3 3248969 3249337 D DUF1090 family putative periplasmic protein 3248969..3249337 Escherichia coli str. K-12 substr. MG1655 947622 b3098 CDS yqjD NC_000913.3 3249375 3249680 D membrane-anchored ribosome-binding protein 3249375..3249680 Escherichia coli str. K-12 substr. MG1655 947614 b3099 CDS yqjE NC_000913.3 3249683 3250087 D DUF1469 family inner membrane protein 3249683..3250087 Escherichia coli str. K-12 substr. MG1655 947611 b3100 CDS yqjK NC_000913.3 3250077 3250376 D uncharacterized protein 3250077..3250376 Escherichia coli str. K-12 substr. MG1655 947610 b3101 CDS yqjF NC_000913.3 3250562 3250954 D putative quinol oxidase subunit 3250562..3250954 Escherichia coli str. K-12 substr. MG1655 947608 b3102 CDS yqjG NC_000913.3 3251024 3252010 D putative transferase; putative S-transferase 3251024..3252010 Escherichia coli str. K-12 substr. MG1655 947615 b3103 CDS yhaH NC_000913.3 3252304 3252669 D putative cytochrome; DUF805 family inner membrane protein 3252304..3252669 Escherichia coli str. K-12 substr. MG1655 947617 b3104 CDS yhaI NC_000913.3 3252911 3253267 D putative cytochrome; DUF805 family inner membrane protein 3252911..3253267 Escherichia coli str. K-12 substr. MG1655 947612 b3105 CDS yhaJ NC_000913.3 3253318 3254214 R putative transcriptional regulator LYSR-type; LysR family putative transcriptional regulator complement(3253318..3254214) Escherichia coli str. K-12 substr. MG1655 947621 b3106 CDS yhaK NC_000913.3 3254319 3255020 D redox-sensitive bicupin 3254319..3255020 Escherichia coli str. K-12 substr. MG1655 947620 b3107 CDS yhaL NC_000913.3 3255043 3255207 D uncharacterized protein 3255043..3255207 Escherichia coli str. K-12 substr. MG1655 947618 b4470 CDS yhaM NC_000913.3 3255341 3256651 R conserved hypothetical protein; putative L-serine dehydratase alpha chain complement(3255341..3256651) Escherichia coli str. K-12 substr. MG1655 2847723 b3110 CDS yhaO NC_000913.3 3256679 3258010 R putative transport system permease protein; putative transporter complement(3256679..3258010) Escherichia coli str. K-12 substr. MG1655 947628 b4471 CDS tdcG NC_000913.3 3258285 3259649 R L-serine dehydratase; L-serine dehydratase 3, anaerobic complement(3258285..3259649) Escherichia coli str. K-12 substr. MG1655 2847724 b3113 CDS tdcF NC_000913.3 3259721 3260110 R putative reactive intermediate deaminase complement(3259721..3260110) Escherichia coli str. K-12 substr. MG1655 947624 b3114 CDS tdcE NC_000913.3 3260124 3262418 R probable formate acetyltransferase 3; pyruvate formate-lyase 4/2-ketobutyrate formate-lyase complement(3260124..3262418) Escherichia coli str. K-12 substr. MG1655 947623 b3115 CDS tdcD NC_000913.3 3262452 3263660 R propionate kinase/acetate kinase II, anaerobic; propionate kinase/acetate kinase C, anaerobic complement(3262452..3263660) Escherichia coli str. K-12 substr. MG1655 947635 b3116 CDS tdcC NC_000913.3 3263686 3265017 R anaerobically inducible L-threonine, L-serine permease; L-threonine/L-serine transporter complement(3263686..3265017) Escherichia coli str. K-12 substr. MG1655 947629 b3117 CDS tdcB NC_000913.3 3265039 3266028 R threonine dehydratase, catabolic; L-threonine dehydratase, catabolic complement(3265039..3266028) Escherichia coli str. K-12 substr. MG1655 947633 b3118 CDS tdcA NC_000913.3 3266127 3267065 R transcriptional activator of tdc operon; tdc operon transcriptional activator complement(3266127..3267065) Escherichia coli str. K-12 substr. MG1655 947494 b3119 CDS tdcR NC_000913.3 3267380 3267598 D threonine dehydratase operon activator protein; L-threonine dehydratase operon activator protein 3267380..3267598 Escherichia coli str. K-12 substr. MG1655 944907 b3120 CDS yhaB NC_000913.3 3267854 3268393 D uncharacterized protein 3267854..3268393 Escherichia coli str. K-12 substr. MG1655 947705 b3121 CDS yhaC NC_000913.3 3268415 3269602 D pentapetide repeats-related protein 3268415..3269602 Escherichia coli str. K-12 substr. MG1655 947557 b3124 CDS garK NC_000913.3 3270625 3271770 R glycerate kinase I complement(3270625..3271770) Escherichia coli str. K-12 substr. MG1655 947632 b3125 CDS garR NC_000913.3 3271867 3272751 R tartronate semialdehyde reductase (TSAR); tartronate semialdehyde reductase complement(3271867..3272751) Escherichia coli str. K-12 substr. MG1655 947631 b3126 CDS garL NC_000913.3 3272787 3273557 R alpha-dehydro-beta-deoxy-D-glucarate aldolase complement(3272787..3273557) Escherichia coli str. K-12 substr. MG1655 947630 b3127 CDS garP NC_000913.3 3273573 3274907 R putative transport protein; putative (D)-galactarate transporter complement(3273573..3274907) Escherichia coli str. K-12 substr. MG1655 947642 b3128 CDS garD NC_000913.3 3275282 3276853 D D-galactarate dehydrogenase 3275282..3276853 Escherichia coli str. K-12 substr. MG1655 947641 b3129 CDS prlF NC_000913.3 3277002 3277337 D putative protease; htrA suppressor protein; antitoxin of the SohA(PrlF)-YhaV toxin-antitoxin system 3277002..3277337 Escherichia coli str. K-12 substr. MG1655 947639 b3130 CDS yhaV NC_000913.3 3277337 3277801 D toxin of the SohB(PrlF)-YhaV toxin-antitoxin system 3277337..3277801 Escherichia coli str. K-12 substr. MG1655 947638 b3131 CDS agaR NC_000913.3 3277856 3278665 R putative DEOR-type transcriptional regulator of aga operon; transcriptional repressor of the aga regulon complement(3277856..3278665) Escherichia coli str. K-12 substr. MG1655 947636 b3132 CDS kbaZ NC_000913.3 3278914 3280194 D putative tagatose 6-phosphate kinase 2; tagatose 6-phosphate aldolase 1, kbaZ subunit 3278914..3280194 Escherichia coli str. K-12 substr. MG1655 947637 b3133 CDS agaV NC_000913.3 3280217 3280690 D PTS system, cytoplasmic, N-acetylgalactosamine-specific IIB component 2 (EIIB-AGA); N-acetylgalactosamine-specific enzyme IIB component of PTS 3280217..3280690 Escherichia coli str. K-12 substr. MG1655 947648 b3134 CDS agaW NC_000913.3 3280701 3281075 D pseudogene, N-acetylgalactosamine-specific enzyme IIC component of PTS;enzyme; Central intermediary metabolism: Amino sugars; PTS system N-acetylgalactosameine-specific IIC component 2; <NA> 3280701..3281075 Escherichia coli str. K-12 substr. MG1655 947647 b3135 CDS agaA NC_000913.3 3281071 3281625 D pseudogene, N-acetylgalactosamine-6-phosphate deacetylase fragment; putative N-acetylgalactosamine-6-phosphate deacetylase; <NA> 3281071..3281625 Escherichia coli str. K-12 substr. MG1655 947646 b3136 CDS agaS NC_000913.3 3281976 3283130 D putative tagatose-6-phosphate aldose/ketose isomerase; tagatose-6-phosphate ketose/aldose isomerase 3281976..3283130 Escherichia coli str. K-12 substr. MG1655 947645 b3137 CDS kbaY NC_000913.3 3283143 3284003 D tagatose-bisphosphate aldolase 2; tagatose 6-phosphate aldolase 1, kbaY subunit 3283143..3284003 Escherichia coli str. K-12 substr. MG1655 947644 b3138 CDS agaB NC_000913.3 3284170 3284646 D PTS system, cytoplasmic, N-acetylgalactosamine-specific IIB component 1 (EIIB-AGA); N-acetylgalactosamine-specific enzyme IIB component of PTS 3284170..3284646 Escherichia coli str. K-12 substr. MG1655 947653 b3139 CDS agaC NC_000913.3 3284685 3285488 D PTS system N-acetylgalactosamine-specific IIC component 1; N-acetylgalactosamine-specific enzyme IIC component of PTS 3284685..3285488 Escherichia coli str. K-12 substr. MG1655 947652 b3140 CDS agaD NC_000913.3 3285478 3286269 D PTS system, N-acetylglucosamine enzyme IID component 1; N-acetylgalactosamine-specific enzyme IID component of PTS 3285478..3286269 Escherichia coli str. K-12 substr. MG1655 947649 b3141 CDS agaI NC_000913.3 3286270 3287025 D putative galactosamine-6-phosphate isomerase; galactosamine-6-phosphate isomerase 3286270..3287025 Escherichia coli str. K-12 substr. MG1655 947985 b3142 CDS yraH NC_000913.3 3287426 3288010 D putative fimbrial-like protein; putative fimbrial-like adhesin protein 3287426..3288010 Escherichia coli str. K-12 substr. MG1655 947658 b3143 CDS yraI NC_000913.3 3288090 3288785 D putative chaperone; putative periplasmic pilin chaperone 3288090..3288785 Escherichia coli str. K-12 substr. MG1655 947657 b3144 CDS yraJ NC_000913.3 3288814 3291330 D putative outer membrane protein 3288814..3291330 Escherichia coli str. K-12 substr. MG1655 947656 b3145 CDS yraK NC_000913.3 3291341 3292432 D putative fimbrial protein; putative fimbrial-like adhesin protein 3291341..3292432 Escherichia coli str. K-12 substr. MG1655 947654 b3146 CDS rsmI NC_000913.3 3292475 3293335 R 16S rRNA C1402 2'-O-ribose methyltransferase, SAM-dependent complement(3292475..3293335) Escherichia coli str. K-12 substr. MG1655 947664 b3147 CDS lpoA NC_000913.3 3293400 3295436 D putative glycosylase; OM lipoprotein stimulator of MrcA transpeptidase 3293400..3295436 Escherichia coli str. K-12 substr. MG1655 947663 b3148 CDS yraN NC_000913.3 3295394 3295789 D UPF0102 family protein 3295394..3295789 Escherichia coli str. K-12 substr. MG1655 947662 b3149 CDS diaA NC_000913.3 3295809 3296399 D DnaA initiator-associating factor for replication initiation 3295809..3296399 Escherichia coli str. K-12 substr. MG1655 947661 b3150 CDS yraP NC_000913.3 3296409 3296984 D putative periplasmic protein; outer membrane lipoprotein 3296409..3296984 Escherichia coli str. K-12 substr. MG1655 947659 b3151 CDS yraQ NC_000913.3 3297098 3298138 R putative inner membrane permease complement(3297098..3298138) Escherichia coli str. K-12 substr. MG1655 947668 b3152 CDS yraR NC_000913.3 3298211 3298846 R putative nucleoside-diphosphate-sugar epimerase complement(3298211..3298846) Escherichia coli str. K-12 substr. MG1655 947667 b3153 CDS yhbO NC_000913.3 3298974 3299492 D stress-resistance protein 3298974..3299492 Escherichia coli str. K-12 substr. MG1655 947666 b3154 CDS yhbP NC_000913.3 3299472 3299915 R UPF0306 family protein complement(3299472..3299915) Escherichia coli str. K-12 substr. MG1655 947665 b3155 CDS yhbQ NC_000913.3 3299966 3300268 D GIY-YIG nuclease superfamily protein 3299966..3300268 Escherichia coli str. K-12 substr. MG1655 947671 b3156 CDS yhbS NC_000913.3 3300255 3300758 R GNAT family putative N-acetyltransferase complement(3300255..3300758) Escherichia coli str. K-12 substr. MG1655 947670 b3157 CDS yhbT NC_000913.3 3300752 3301276 R SCP-2 sterol transfer family protein complement(3300752..3301276) Escherichia coli str. K-12 substr. MG1655 947669 b3158 CDS yhbU NC_000913.3 3301485 3302480 D putative collagenase; U32 peptidase family protein 3301485..3302480 Escherichia coli str. K-12 substr. MG1655 949115 b3159 CDS yhbV NC_000913.3 3302489 3303367 D U32 peptidase family protein 3302489..3303367 Escherichia coli str. K-12 substr. MG1655 949117 b3160 CDS yhbW NC_000913.3 3303448 3304455 D putative enzyme; putative luciferase-like monooxygenase 3303448..3304455 Escherichia coli str. K-12 substr. MG1655 947677 b3161 CDS mtr NC_000913.3 3304573 3305817 R tryptophan-specific transport protein; tryptophan transporter of high affinity complement(3304573..3305817) Escherichia coli str. K-12 substr. MG1655 947675 b3162 CDS deaD NC_000913.3 3305971 3307860 R inducible ATP-independent RNA helicase; ATP-dependent RNA helicase complement(3305971..3307860) Escherichia coli str. K-12 substr. MG1655 947674 b4685 CDS yrbN NC_000913.3 3307853 3307933 R uncharacterized protein complement(3307853..3307933) Escherichia coli str. K-12 substr. MG1655 7751619 b3163 CDS nlpI NC_000913.3 3308040 3308924 R lipoprotein involved in osmotic sensitivity and filamentation complement(3308040..3308924) Escherichia coli str. K-12 substr. MG1655 947673 b3164 CDS pnp NC_000913.3 3309033 3311168 R polynucleotide phosphorylase; cytidylate kinase activity; polynucleotide phosphorylase/polyadenylase complement(3309033..3311168) Escherichia coli str. K-12 substr. MG1655 947672 b3165 CDS rpsO NC_000913.3 3311415 3311684 R 30S ribosomal subunit protein S15 complement(3311415..3311684) Escherichia coli str. K-12 substr. MG1655 947686 b3166 CDS truB NC_000913.3 3311833 3312777 R tRNA pseudouridine 5S synthase; tRNA pseudouridine synthase B: tRNA pseudouridine(55) synthase and putative tmRNA pseudouridine(342) synthase complement(3311833..3312777) Escherichia coli str. K-12 substr. MG1655 947687 b3167 CDS rbfA NC_000913.3 3312777 3313178 R ribosome-binding factor A; 30s ribosome binding factor complement(3312777..3313178) Escherichia coli str. K-12 substr. MG1655 947685 b3168 CDS infB NC_000913.3 3313342 3316014 R protein chain initiation factor IF-2; translation initiation factor IF-2 complement(3313342..3316014) Escherichia coli str. K-12 substr. MG1655 947684 b3169 CDS nusA NC_000913.3 3316039 3317526 R transcription pausing; L factor; transcription termination/antitermination L factor complement(3316039..3317526) Escherichia coli str. K-12 substr. MG1655 947682 b3170 CDS rimP NC_000913.3 3317554 3318006 R ribosome maturation factor for 30S subunits complement(3317554..3318006) Escherichia coli str. K-12 substr. MG1655 947680 b3172 CDS argG NC_000913.3 3318637 3319980 D argininosuccinate synthetase 3318637..3319980 Escherichia coli str. K-12 substr. MG1655 947590 b3173 CDS yhbX NC_000913.3 3319988 3321613 R putative alkaline phosphatase I; putative EptAB family phosphoethanolamine transferase, inner membrane protein complement(3319988..3321613) Escherichia coli str. K-12 substr. MG1655 947711 b3175 CDS secG NC_000913.3 3322173 3322505 R protein export - membrane protein; preprotein translocase membrane subunit complement(3322173..3322505) Escherichia coli str. K-12 substr. MG1655 947720 b3176 CDS glmM NC_000913.3 3322733 3324070 R phosphoglucosamine mutase complement(3322733..3324070) Escherichia coli str. K-12 substr. MG1655 947692 b3177 CDS folP NC_000913.3 3324063 3324911 R 7,8-dihydropteroate synthase complement(3324063..3324911) Escherichia coli str. K-12 substr. MG1655 947691 b3178 CDS ftsH NC_000913.3 3325001 3326935 R protease, ATP-dependent zinc-metallo complement(3325001..3326935) Escherichia coli str. K-12 substr. MG1655 947690 b3179 CDS rlmE NC_000913.3 3327035 3327664 R 23S rRNA U2552 2'-O-ribose methyltransferase, SAM-dependent complement(3327035..3327664) Escherichia coli str. K-12 substr. MG1655 947689 b3180 CDS yhbY NC_000913.3 3327790 3328083 D RNA binding protein associated with pre-50S ribosomal subunits 3327790..3328083 Escherichia coli str. K-12 substr. MG1655 947688 b3181 CDS greA NC_000913.3 3328239 3328715 R transcription elongation factor: cleaves 3' nucleotide of paused mRNA; transcript cleavage factor complement(3328239..3328715) Escherichia coli str. K-12 substr. MG1655 947696 b3182 CDS dacB NC_000913.3 3328963 3330396 D D-alanyl-D-alanine carboxypeptidase, fraction B; penicillin-binding protein 4; D-alanyl-D-alanine carboxypeptidase 3328963..3330396 Escherichia coli str. K-12 substr. MG1655 947693 b3183 CDS obgE NC_000913.3 3330582 3331754 R putative GTP-binding factor; GTPase involved in cell partioning and DNA repair complement(3330582..3331754) Escherichia coli str. K-12 substr. MG1655 947694 b3184 CDS yhbE NC_000913.3 3331770 3332735 R EamA family inner membrane putative transporter complement(3331770..3332735) Escherichia coli str. K-12 substr. MG1655 947699 b3185 CDS rpmA NC_000913.3 3332862 3333119 R 50S ribosomal subunit protein L27 complement(3332862..3333119) Escherichia coli str. K-12 substr. MG1655 945190 b3186 CDS rplU NC_000913.3 3333140 3333451 R 50S ribosomal subunit protein L21 complement(3333140..3333451) Escherichia coli str. K-12 substr. MG1655 949057 b3187 CDS ispB NC_000913.3 3333710 3334681 D octaprenyl diphosphate synthase 3333710..3334681 Escherichia coli str. K-12 substr. MG1655 947364 b3188 CDS sfsB NC_000913.3 3334909 3335187 D regulatory factor of maltose metabolism; similar to Ner repressor protein of phage Mu; malPQ operon transcriptional activator 3334909..3335187 Escherichia coli str. K-12 substr. MG1655 947960 b3189 CDS murA NC_000913.3 3335235 3336494 R first step in murein biosynthesis;UDP-N-glucosamine 1-carboxyvinyltransferase; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(3335235..3336494) Escherichia coli str. K-12 substr. MG1655 947703 b3190 CDS ibaG NC_000913.3 3336549 3336803 R acid stress protein; putative BolA family transcriptional regulator complement(3336549..3336803) Escherichia coli str. K-12 substr. MG1655 947958 b3191 CDS mlaB NC_000913.3 3336963 3337256 R ABC transporter maintaining OM lipid asymmetry, cytoplasmic STAS component complement(3336963..3337256) Escherichia coli str. K-12 substr. MG1655 947954 b3192 CDS mlaC NC_000913.3 3337256 3337891 R ABC transporter maintaining OM lipid asymmetry, periplasmic binding protein complement(3337256..3337891) Escherichia coli str. K-12 substr. MG1655 947710 b3193 CDS mlaD NC_000913.3 3337910 3338461 R OM lipid asymmetry maintenance protein; membrane-anchored ABC family periplasmic binding protein complement(3337910..3338461) Escherichia coli str. K-12 substr. MG1655 947712 b3194 CDS mlaE NC_000913.3 3338466 3339248 R ABC transporter maintaining OM lipid asymmetry, inner membrane permease protein complement(3338466..3339248) Escherichia coli str. K-12 substr. MG1655 947732 b3195 CDS mlaF NC_000913.3 3339256 3340065 R putative ATP-binding component of a transport system; ABC transporter maintaining OM lipid asymmetry, ATP-binding protein complement(3339256..3340065) Escherichia coli str. K-12 substr. MG1655 947729 b3196 CDS yrbG NC_000913.3 3340275 3341252 D putative calcium/sodium:proton antiporter 3340275..3341252 Escherichia coli str. K-12 substr. MG1655 947730 b3197 CDS kdsD NC_000913.3 3341266 3342252 D putative isomerase; D-arabinose 5-phosphate isomerase 3341266..3342252 Escherichia coli str. K-12 substr. MG1655 947734 b3198 CDS kdsC NC_000913.3 3342273 3342839 D 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 3342273..3342839 Escherichia coli str. K-12 substr. MG1655 947717 b3199 CDS lptC NC_000913.3 3342836 3343411 D periplasmic membrane-anchored LPS-binding protein; LPS export protein 3342836..3343411 Escherichia coli str. K-12 substr. MG1655 947722 b3200 CDS lptA NC_000913.3 3343380 3343937 D lipopolysaccharide export ABC transporter periplasmic binding protein; Lipid A binding protein; LPS export and assembly protein 3343380..3343937 Escherichia coli str. K-12 substr. MG1655 947920 b3201 CDS lptB NC_000913.3 3343944 3344669 D putative ATP-binding component of a transport system; lipopolysaccharide export ABC transporter ATPase 3343944..3344669 Escherichia coli str. K-12 substr. MG1655 947725 b3202 CDS rpoN NC_000913.3 3344717 3346150 D RNA polymerase, sigma(54 or 60) factor; nitrogen and fermentation regulation; RNA polymerase, sigma 54 (sigma N) factor 3344717..3346150 Escherichia coli str. K-12 substr. MG1655 947714 b3203 CDS hpf NC_000913.3 3346173 3346460 D probable sigma-54 modulation protein; ribosome hibernation promoting factor HPF; stabilizes 100S dimers 3346173..3346460 Escherichia coli str. K-12 substr. MG1655 947718 b3204 CDS ptsN NC_000913.3 3346578 3347069 D phosphotransferase system enzyme IIA, regulates N metabolism; sugar-specific enzyme IIA component of PTS 3346578..3347069 Escherichia coli str. K-12 substr. MG1655 947721 b3205 CDS yhbJ NC_000913.3 3347115 3347969 D adaptor protein for GlmZ/GlmY sRNA decay, glucosamine-6-phosphate-regulated; NTPase 3347115..3347969 Escherichia coli str. K-12 substr. MG1655 947727 b3206 CDS npr NC_000913.3 3347966 3348238 D phosphocarrier protein HPr-like NPr, nitrogen related, exchanges phosphate with Enzyme I, Hpr; phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) 3347966..3348238 Escherichia coli str. K-12 substr. MG1655 947914 b3207 CDS yrbL NC_000913.3 3348452 3349084 D Mg(2+)-starvation-stimulated protein 3348452..3349084 Escherichia coli str. K-12 substr. MG1655 947910 b3208 CDS mtgA NC_000913.3 3349081 3349809 R putative peptidoglycan enzyme; biosynthetic peptidoglycan transglycosylase complement(3349081..3349809) Escherichia coli str. K-12 substr. MG1655 947728 b3209 CDS elbB NC_000913.3 3349806 3350459 R sigma cross-reacting protein 27A (SCRP-27A); isoprenoid biosynthesis protein with amidotransferase-like domain complement(3349806..3350459) Escherichia coli str. K-12 substr. MG1655 947903 b3210 CDS arcB NC_000913.3 3350689 3353025 R aerobic respiration sensor-response protein; histidine protein kinase/phosphatase, sensor for arcA; aerobic respiration control sensor histidine protein kinase, cognate to two-component response regulators ArcA and RssB complement(3350689..3353025) Escherichia coli str. K-12 substr. MG1655 947887 b3211 CDS yhcC NC_000913.3 3353121 3354050 R putative Fe-S oxidoreductase, Radical SAM superfamily protein complement(3353121..3354050) Escherichia coli str. K-12 substr. MG1655 947733 b3212 CDS gltB NC_000913.3 3354725 3359185 D glutamate synthase, large subunit 3354725..3359185 Escherichia coli str. K-12 substr. MG1655 947724 b3213 CDS gltD NC_000913.3 3359198 3360616 D glutamate synthase, small subunit; glutamate synthase, 4Fe-4S protein, small subunit 3359198..3360616 Escherichia coli str. K-12 substr. MG1655 947723 b3214 CDS gltF NC_000913.3 3361176 3361940 D regulator of gltBDF operon, induction of Ntr enzymes; periplasmic protein 3361176..3361940 Escherichia coli str. K-12 substr. MG1655 947746 b3215 CDS yhcA NC_000913.3 3362112 3362786 D putative chaperone; putative periplasmic chaperone protein 3362112..3362786 Escherichia coli str. K-12 substr. MG1655 947741 b3216 CDS yhcD NC_000913.3 3362807 3365188 D putative outer membrane protein; putative outer membrane fimbrial subunit usher protein 3362807..3365188 Escherichia coli str. K-12 substr. MG1655 947738 b4569 CDS yhcE NC_000913.3 3365185 3366929 D pseudogene fragment; interrupted by IS5; <NA> join(3365185..3365551,3366751..3366929) Escherichia coli str. K-12 substr. MG1655 4056032 b3218 CDS insH1 NC_000913.3 3365702 3366718 R IS5 transposase and trans-activator complement(3365702..3366718) Escherichia coli str. K-12 substr. MG1655 947743 b3219 CDS yhcF NC_000913.3 3366926 3367642 D putative transcriptional regulator 3366926..3367642 Escherichia coli str. K-12 substr. MG1655 947735 b3220 CDS yhcG NC_000913.3 3367827 3368954 D DUF1016 family protein in the PD-(D/E)XK nuclease superfamily 3367827..3368954 Escherichia coli str. K-12 substr. MG1655 947739 b3221 CDS yhcH NC_000913.3 3369014 3369478 R DUF386 family protein, cupin superfamily complement(3369014..3369478) Escherichia coli str. K-12 substr. MG1655 947750 b3222 CDS nanK NC_000913.3 3369475 3370350 R N-acetylmannosamine kinase complement(3369475..3370350) Escherichia coli str. K-12 substr. MG1655 947757 b3223 CDS nanE NC_000913.3 3370347 3371036 R putative N-acetylmannosamine-6-P epimerase complement(3370347..3371036) Escherichia coli str. K-12 substr. MG1655 947745 b3224 CDS nanT NC_000913.3 3371084 3372574 R sialic acid transporter complement(3371084..3372574) Escherichia coli str. K-12 substr. MG1655 947740 b3225 CDS nanA NC_000913.3 3372683 3373576 R N-acetylneuraminate lyase (aldolase); catabolism of sialic acid; not K-12?; N-acetylneuraminate lyase complement(3372683..3373576) Escherichia coli str. K-12 substr. MG1655 947742 b3226 CDS nanR NC_000913.3 3373698 3374489 R sialic acid-inducible nan operon repressor complement(3373698..3374489) Escherichia coli str. K-12 substr. MG1655 945468 b3227 CDS dcuD NC_000913.3 3374869 3376236 D putative transporter 3374869..3376236 Escherichia coli str. K-12 substr. MG1655 946575 b3228 CDS sspB NC_000913.3 3376279 3376776 R stringent starvation protein B; ClpXP protease specificity enhancing factor complement(3376279..3376776) Escherichia coli str. K-12 substr. MG1655 944774 b3229 CDS sspA NC_000913.3 3376782 3377420 R regulator of transcription; stringent starvation protein A; stringent starvation protein A, phage P1 late gene activator, RNAP-associated acid-resistance protein, inactive glutathione S-transferase homolog complement(3376782..3377420) Escherichia coli str. K-12 substr. MG1655 944744 b3230 CDS rpsI NC_000913.3 3377815 3378207 R 30S ribosomal subunit protein S9 complement(3377815..3378207) Escherichia coli str. K-12 substr. MG1655 949000 b3231 CDS rplM NC_000913.3 3378223 3378651 R 50S ribosomal subunit protein L13 complement(3378223..3378651) Escherichia coli str. K-12 substr. MG1655 947828 b3232 CDS zapE NC_000913.3 3378870 3379997 R divisome ATPase complement(3378870..3379997) Escherichia coli str. K-12 substr. MG1655 947821 b3233 CDS yhcB NC_000913.3 3380191 3380589 D DUF1043 family inner membrane-anchored protein 3380191..3380589 Escherichia coli str. K-12 substr. MG1655 947815 b3234 CDS degQ NC_000913.3 3380743 3382110 D serine endoprotease; serine endoprotease, periplasmic 3380743..3382110 Escherichia coli str. K-12 substr. MG1655 947812 b3235 CDS degS NC_000913.3 3382200 3383267 D protease; serine endoprotease, periplasmic 3382200..3383267 Escherichia coli str. K-12 substr. MG1655 947865 b3236 CDS mdh NC_000913.3 3383330 3384268 R malate dehydrogenase; malate dehydrogenase, NAD(P)-binding complement(3383330..3384268) Escherichia coli str. K-12 substr. MG1655 947854 b3237 CDS argR NC_000913.3 3384703 3385173 D repressor of arg regulon; cer-mediated site specific recombination; l-arginine-responsive arginine metabolism regulon transcriptional regulator 3384703..3385173 Escherichia coli str. K-12 substr. MG1655 947861 b3238 CDS yhcN NC_000913.3 3385538 3385801 D cadmium and peroxide resistance protein, stress-induced 3385538..3385801 Escherichia coli str. K-12 substr. MG1655 947835 b3239 CDS yhcO NC_000913.3 3385857 3386129 R putative barnase inhibitor complement(3385857..3386129) Escherichia coli str. K-12 substr. MG1655 947830 b3240 CDS aaeB NC_000913.3 3386221 3388188 R p-hydroxybenzoic acid efflux system component complement(3386221..3388188) Escherichia coli str. K-12 substr. MG1655 947747 b3241 CDS aaeA NC_000913.3 3388194 3389126 R p-hydroxybenzoic acid efflux system component complement(3388194..3389126) Escherichia coli str. K-12 substr. MG1655 947748 b3242 CDS aaeX NC_000913.3 3389134 3389337 R DUF1656 family putative inner membrane efflux pump associated protein complement(3389134..3389337) Escherichia coli str. K-12 substr. MG1655 947751 b3243 CDS aaeR NC_000913.3 3389520 3390449 D transcriptional regulator for aaeXAB operon 3389520..3390449 Escherichia coli str. K-12 substr. MG1655 947760 b3244 CDS tldD NC_000913.3 3390583 3392028 R suppresses inhibitory activity of CsrA; putative peptidase complement(3390583..3392028) Escherichia coli str. K-12 substr. MG1655 947749 b4472 CDS yhdP NC_000913.3 3392458 3396258 R DUF3971-AsmA2 domains protein complement(3392458..3396258) Escherichia coli str. K-12 substr. MG1655 2847740 b3247 CDS rng NC_000913.3 3396326 3397795 R ribonuclease G complement(3396326..3397795) Escherichia coli str. K-12 substr. MG1655 947744 b3248 CDS yhdE NC_000913.3 3397785 3398378 R dTTP/UTP pyrophosphatase; m(5)UTP/m(5)CTP/pseudo-UTP pyrophosphatase complement(3397785..3398378) Escherichia coli str. K-12 substr. MG1655 947753 b3249 CDS mreD NC_000913.3 3398387 3398875 R rod shape-determining protein; cell wall structural complex MreBCD transmembrane component MreD complement(3398387..3398875) Escherichia coli str. K-12 substr. MG1655 947756 b3250 CDS mreC NC_000913.3 3398875 3399978 R rod shape-determining protein; cell wall structural complex MreBCD transmembrane component MreC complement(3398875..3399978) Escherichia coli str. K-12 substr. MG1655 947655 b3251 CDS mreB NC_000913.3 3400044 3401087 R regulator of ftsI, penicillin binding protein 3, septation function; cell wall structural complex MreBCD, actin-like component MreB complement(3400044..3401087) Escherichia coli str. K-12 substr. MG1655 948588 b3252 CDS csrD NC_000913.3 3401392 3403332 R targeting factor for csrBC sRNA degradation complement(3401392..3403332) Escherichia coli str. K-12 substr. MG1655 947702 b3253 CDS acuI NC_000913.3 3403484 3404458 D putative dehydrogenase; putative acryloyl-CoA reductase 3403484..3404458 Escherichia coli str. K-12 substr. MG1655 947848 b4697 CDS yrdF NC_000913.3 3404495 3404637 D pseudogene, conserved protein; <NA> 3404495..3404637 Escherichia coli str. K-12 substr. MG1655 7751640 b4646 CDS yrdE NC_000913.3 3404638 3405031 D pseudogene, yedZ paralog; <NA> join(3404638..3404733,3404732..3405031) Escherichia coli str. K-12 substr. MG1655 5625572 b3255 CDS accB NC_000913.3 3405436 3405906 D acetylCoA carboxylase, BCCP subunit; carrier of biotin; acetyl CoA carboxylase, BCCP subunit 3405436..3405906 Escherichia coli str. K-12 substr. MG1655 947758 b3256 CDS accC NC_000913.3 3405917 3407266 D acetyl CoA carboxylase, biotin carboxylase subunit; acetyl-CoA carboxylase, biotin carboxylase subunit 3405917..3407266 Escherichia coli str. K-12 substr. MG1655 947761 b3257 CDS yhdT NC_000913.3 3407375 3407617 D DUF997 family putative inner membrane protein 3407375..3407617 Escherichia coli str. K-12 substr. MG1655 947762 b3258 CDS panF NC_000913.3 3407607 3409058 D sodium/pantothenate symporter; pantothenate:sodium symporter 3407607..3409058 Escherichia coli str. K-12 substr. MG1655 947752 b3259 CDS prmA NC_000913.3 3409070 3409951 D methyltransferase for 50S ribosomal subunit protein L11 3409070..3409951 Escherichia coli str. K-12 substr. MG1655 947708 b3260 CDS dusB NC_000913.3 3410280 3411245 D putative dehydrogenase; tRNA-dihydrouridine synthase B 3410280..3411245 Escherichia coli str. K-12 substr. MG1655 947707 b3261 CDS fis NC_000913.3 3411271 3411567 D site-specific DNA inversion stimulation factor; DNA-binding protein; a trans activator for transcription; global DNA-binding transcriptional dual regulator 3411271..3411567 Escherichia coli str. K-12 substr. MG1655 947697 b3262 CDS yhdJ NC_000913.3 3411653 3412537 D putative methyltransferase; DNA adenine methyltransferase, SAM-dependent 3411653..3412537 Escherichia coli str. K-12 substr. MG1655 947695 b3263 CDS yhdU NC_000913.3 3412621 3412800 D putative membrane protein 3412621..3412800 Escherichia coli str. K-12 substr. MG1655 947700 b3264 CDS acrS NC_000913.3 3412803 3413465 R putative transcriptional regulator; acrAB operon transcriptional repressor complement(3412803..3413465) Escherichia coli str. K-12 substr. MG1655 947704 b3265 CDS acrE NC_000913.3 3413864 3415021 D transmembrane protein affects septum formation and cell membrane permeability; cytoplasmic membrane lipoprotein 3413864..3415021 Escherichia coli str. K-12 substr. MG1655 947706 b3266 CDS acrF NC_000913.3 3415033 3418137 D integral transmembrane protein; acridine resistance; multidrug efflux system protein 3415033..3418137 Escherichia coli str. K-12 substr. MG1655 947768 b3267 CDS yhdV NC_000913.3 3418390 3418611 D putative outer membrane protein 3418390..3418611 Escherichia coli str. K-12 substr. MG1655 947767 b3268 CDS yhdW NC_000913.3 3419042 3420066 D pseudogene, ABC transporter periplasmic binding protein family;putative transport; Not classified; putative periplasmic binding transport protein; periplasmic-binding component of ABC superfamily; <NA> join(3419042..3419107,3419107..3420066) Escherichia coli str. K-12 substr. MG1655 947766 b3269 CDS yhdX NC_000913.3 3420134 3421315 D putative transport system permease protein; membrane component of ABC superfamily; putative amino acid ABC transporter permease 3420134..3421315 Escherichia coli str. K-12 substr. MG1655 947765 b3270 CDS yhdY NC_000913.3 3421325 3422428 D putative transport system permease protein; membrane component of ABC superfamily; putative amino acid ABC transporter permease 3421325..3422428 Escherichia coli str. K-12 substr. MG1655 947764 b3271 CDS yhdZ NC_000913.3 3422436 3423194 D putative ATP-binding component of a transport system; ATP-binding component of ABC superfamily; putative amino acid ABC transporter ATPase 3422436..3423194 Escherichia coli str. K-12 substr. MG1655 947763 b3279 CDS yrdA NC_000913.3 3429236 3429790 D putative transferase; bacterial transferase hexapeptide domain protein 3429236..3429790 Escherichia coli str. K-12 substr. MG1655 947775 b3280 CDS yrdB NC_000913.3 3429766 3430023 R DUF1488 family protein complement(3429766..3430023) Escherichia coli str. K-12 substr. MG1655 947774 b3281 CDS aroE NC_000913.3 3430020 3430838 R dehydroshikimate reductase; dehydroshikimate reductase, NAD(P)-binding complement(3430020..3430838) Escherichia coli str. K-12 substr. MG1655 947776 b3282 CDS tsaC NC_000913.3 3430843 3431415 R tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein, threonine-dependent ADP-forming ATPase complement(3430843..3431415) Escherichia coli str. K-12 substr. MG1655 947783 b3283 CDS yrdD NC_000913.3 3431420 3431962 R putative DNA topoisomerase; ssDNA-binding protein, function unknown complement(3431420..3431962) Escherichia coli str. K-12 substr. MG1655 947782 b3284 CDS smg NC_000913.3 3431991 3432464 R DUF494 family putative periplasmic protein complement(3431991..3432464) Escherichia coli str. K-12 substr. MG1655 947781 b4473 CDS smf NC_000913.3 3432436 3433560 R DNA recombination-mediator A family protein complement(3432436..3433560) Escherichia coli str. K-12 substr. MG1655 2847708 b3287 CDS def NC_000913.3 3433690 3434199 D peptide deformylase 3433690..3434199 Escherichia coli str. K-12 substr. MG1655 947780 b3288 CDS fmt NC_000913.3 3434214 3435161 D 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase 3434214..3435161 Escherichia coli str. K-12 substr. MG1655 947779 b3289 CDS rsmB NC_000913.3 3435207 3436496 D 16S rRNA m5C967 methyltransferase; 16S rRNA m(5)C967 methyltransferase, SAM-dependent 3435207..3436496 Escherichia coli str. K-12 substr. MG1655 947789 b3290 CDS trkA NC_000913.3 3436518 3437894 D transport of potassium; NAD-binding component of TrK potassium transporter 3436518..3437894 Escherichia coli str. K-12 substr. MG1655 947788 b3291 CDS mscL NC_000913.3 3438024 3438434 D mechanosensitive channel protein, high conductance 3438024..3438434 Escherichia coli str. K-12 substr. MG1655 947787 b4550 CDS arfA NC_000913.3 3438431 3438649 R alternate ribosome-rescue factor A complement(3438431..3438649) Escherichia coli str. K-12 substr. MG1655 1450289 b3292 CDS zntR NC_000913.3 3438705 3439130 R zntA gene transcriptional activator complement(3438705..3439130) Escherichia coli str. K-12 substr. MG1655 947786 b3293 CDS yhdN NC_000913.3 3439141 3439509 R DUF1992 family protein complement(3439141..3439509) Escherichia coli str. K-12 substr. MG1655 947785 b3294 CDS rplQ NC_000913.3 3439616 3439999 R 50S ribosomal subunit protein L17 complement(3439616..3439999) Escherichia coli str. K-12 substr. MG1655 947784 b3295 CDS rpoA NC_000913.3 3440040 3441029 R RNA polymerase, alpha subunit complement(3440040..3441029) Escherichia coli str. K-12 substr. MG1655 947794 b3296 CDS rpsD NC_000913.3 3441055 3441675 R 30S ribosomal subunit protein S4 complement(3441055..3441675) Escherichia coli str. K-12 substr. MG1655 947793 b3297 CDS rpsK NC_000913.3 3441709 3442098 R 30S ribosomal subunit protein S11 complement(3441709..3442098) Escherichia coli str. K-12 substr. MG1655 947792 b3298 CDS rpsM NC_000913.3 3442115 3442471 R 30S ribosomal subunit protein S13 complement(3442115..3442471) Escherichia coli str. K-12 substr. MG1655 947791 b3299 CDS rpmJ NC_000913.3 3442618 3442734 R 50S ribosomal subunit protein L36 complement(3442618..3442734) Escherichia coli str. K-12 substr. MG1655 947805 b3300 CDS secY NC_000913.3 3442766 3444097 R putative ATPase subunit of translocase; preprotein translocase membrane subunit complement(3442766..3444097) Escherichia coli str. K-12 substr. MG1655 947799 b3301 CDS rplO NC_000913.3 3444105 3444539 R 50S ribosomal subunit protein L15 complement(3444105..3444539) Escherichia coli str. K-12 substr. MG1655 947798 b3302 CDS rpmD NC_000913.3 3444543 3444722 R 50S ribosomal subunit protein L30 complement(3444543..3444722) Escherichia coli str. K-12 substr. MG1655 947797 b3303 CDS rpsE NC_000913.3 3444726 3445229 R 30S ribosomal subunit protein S5 complement(3444726..3445229) Escherichia coli str. K-12 substr. MG1655 947795 b3304 CDS rplR NC_000913.3 3445244 3445597 R 50S ribosomal subunit protein L18 complement(3445244..3445597) Escherichia coli str. K-12 substr. MG1655 947804 b3305 CDS rplF NC_000913.3 3445607 3446140 R 50S ribosomal subunit protein L6 complement(3445607..3446140) Escherichia coli str. K-12 substr. MG1655 947803 b3306 CDS rpsH NC_000913.3 3446153 3446545 R 30S ribosomal subunit protein S8, and regulator; 30S ribosomal subunit protein S8 complement(3446153..3446545) Escherichia coli str. K-12 substr. MG1655 947802 b3307 CDS rpsN NC_000913.3 3446579 3446884 R 30S ribosomal subunit protein S14 complement(3446579..3446884) Escherichia coli str. K-12 substr. MG1655 947801 b3308 CDS rplE NC_000913.3 3446899 3447438 R 50S ribosomal subunit protein L5 complement(3446899..3447438) Escherichia coli str. K-12 substr. MG1655 947800 b3309 CDS rplX NC_000913.3 3447453 3447767 R 50S ribosomal subunit protein L24 complement(3447453..3447767) Escherichia coli str. K-12 substr. MG1655 947810 b3310 CDS rplN NC_000913.3 3447778 3448149 R 50S ribosomal subunit protein L14 complement(3447778..3448149) Escherichia coli str. K-12 substr. MG1655 947809 b3311 CDS rpsQ NC_000913.3 3448314 3448568 R 30S ribosomal subunit protein S17 complement(3448314..3448568) Escherichia coli str. K-12 substr. MG1655 947808 b3312 CDS rpmC NC_000913.3 3448568 3448759 R 50S ribosomal subunit protein L29 complement(3448568..3448759) Escherichia coli str. K-12 substr. MG1655 947807 b3313 CDS rplP NC_000913.3 3448759 3449169 R 50S ribosomal subunit protein L16 complement(3448759..3449169) Escherichia coli str. K-12 substr. MG1655 947806 b3314 CDS rpsC NC_000913.3 3449182 3449883 R 30S ribosomal subunit protein S3 complement(3449182..3449883) Escherichia coli str. K-12 substr. MG1655 947814 b3315 CDS rplV NC_000913.3 3449901 3450233 R 50S ribosomal subunit protein L22 complement(3449901..3450233) Escherichia coli str. K-12 substr. MG1655 947813 b3316 CDS rpsS NC_000913.3 3450248 3450526 R 30S ribosomal subunit protein S19 complement(3450248..3450526) Escherichia coli str. K-12 substr. MG1655 947811 b3317 CDS rplB NC_000913.3 3450543 3451364 R 50S ribosomal subunit protein L2 complement(3450543..3451364) Escherichia coli str. K-12 substr. MG1655 947820 b3318 CDS rplW NC_000913.3 3451382 3451684 R 50S ribosomal subunit protein L23 complement(3451382..3451684) Escherichia coli str. K-12 substr. MG1655 947819 b3319 CDS rplD NC_000913.3 3451681 3452286 R 50S ribosomal subunit protein L4, regulates expression of S10 operon; 50S ribosomal subunit protein L4 complement(3451681..3452286) Escherichia coli str. K-12 substr. MG1655 947818 b3320 CDS rplC NC_000913.3 3452297 3452926 R 50S ribosomal subunit protein L3 complement(3452297..3452926) Escherichia coli str. K-12 substr. MG1655 947817 b3321 CDS rpsJ NC_000913.3 3452959 3453270 R 30S ribosomal subunit protein S10 complement(3452959..3453270) Escherichia coli str. K-12 substr. MG1655 947816 b3322 CDS gspB NC_000913.3 3453508 3453927 R calcium-binding protein required for initiation of chromosome replication; part of gsp divergon involved in type II protein secretion complement(3453508..3453927) Escherichia coli str. K-12 substr. MG1655 947826 b3323 CDS gspA NC_000913.3 3453929 3455398 R putative export protein A for general secretion pathway (GSP); general secretory pathway component, cryptic complement(3453929..3455398) Escherichia coli str. K-12 substr. MG1655 947825 b3324 CDS gspC NC_000913.3 3455578 3456393 D general secretory pathway component, cryptic 3455578..3456393 Escherichia coli str. K-12 substr. MG1655 947824 b3325 CDS gspD NC_000913.3 3456377 3458329 D general secretory pathway component, cryptic 3456377..3458329 Escherichia coli str. K-12 substr. MG1655 947822 b3326 CDS gspE NC_000913.3 3458339 3459820 D general secretory pathway component, cryptic 3458339..3459820 Escherichia coli str. K-12 substr. MG1655 947823 b3327 CDS gspF NC_000913.3 3459817 3461013 D general secretory pathway component, cryptic 3459817..3461013 Escherichia coli str. K-12 substr. MG1655 947829 b3328 CDS gspG NC_000913.3 3461023 3461460 D pseudopilin, cryptic, general secretion pathway 3461023..3461460 Escherichia coli str. K-12 substr. MG1655 947827 b3329 CDS gspH NC_000913.3 3461468 3461977 D putative general secretory pathway component, cryptic 3461468..3461977 Escherichia coli str. K-12 substr. MG1655 947834 b3330 CDS gspI NC_000913.3 3461974 3462351 D general secretory pathway component, cryptic 3461974..3462351 Escherichia coli str. K-12 substr. MG1655 947833 b3331 CDS gspJ NC_000913.3 3462344 3462931 D putative general secretory pathway component, cryptic 3462344..3462931 Escherichia coli str. K-12 substr. MG1655 947832 b3332 CDS gspK NC_000913.3 3462924 3463907 D general secretory pathway component, cryptic 3462924..3463907 Escherichia coli str. K-12 substr. MG1655 947831 b3333 CDS gspL NC_000913.3 3463922 3465085 D general secretory pathway component, cryptic 3463922..3465085 Escherichia coli str. K-12 substr. MG1655 947842 b3334 CDS gspM NC_000913.3 3465082 3465543 D general secretory pathway component, cryptic 3465082..3465543 Escherichia coli str. K-12 substr. MG1655 947841 b3335 CDS gspO NC_000913.3 3465543 3466220 D bifunctional prepilin leader peptidase/ methylase 3465543..3466220 Escherichia coli str. K-12 substr. MG1655 947840 b3336 CDS bfr NC_000913.3 3466249 3466725 R bacterioferrin, an iron storage homoprotein; bacterioferritin, iron storage and detoxification protein complement(3466249..3466725) Escherichia coli str. K-12 substr. MG1655 947839 b3337 CDS bfd NC_000913.3 3466797 3466991 R bacterioferritin-associated ferredoxin complement(3466797..3466991) Escherichia coli str. K-12 substr. MG1655 947836 b3338 CDS chiA NC_000913.3 3467160 3469853 R periplasmic endochitinase complement(3467160..3469853) Escherichia coli str. K-12 substr. MG1655 947837 b3339 CDS tufA NC_000913.3 3470145 3471329 R translation elongation factor EF-Tu 1 complement(3470145..3471329) Escherichia coli str. K-12 substr. MG1655 947838 b3340 CDS fusA NC_000913.3 3471400 3473514 R GTP-binding protein chain elongation factor EF-G; protein chain elongation factor EF-G, GTP-binding complement(3471400..3473514) Escherichia coli str. K-12 substr. MG1655 947847 b3341 CDS rpsG NC_000913.3 3473542 3474081 R 30S ribosomal subunit protein S7, initiates assembly; 30S ribosomal subunit protein S7 complement(3473542..3474081) Escherichia coli str. K-12 substr. MG1655 947846 b3342 CDS rpsL NC_000913.3 3474178 3474552 R 30S ribosomal subunit protein S12 complement(3474178..3474552) Escherichia coli str. K-12 substr. MG1655 947845 b3343 CDS tusB NC_000913.3 3474678 3474965 R mnm(5)-s(2)U34-tRNA synthesis 2-thiolation protein complement(3474678..3474965) Escherichia coli str. K-12 substr. MG1655 947844 b3344 CDS tusC NC_000913.3 3474973 3475332 R mnm(5)-s(2)U34-tRNA synthesis 2-thiolation protein complement(3474973..3475332) Escherichia coli str. K-12 substr. MG1655 947853 b3345 CDS tusD NC_000913.3 3475332 3475718 R sulfurtransferase for 2-thiolation step of mnm(5)-s(2)U34-tRNA synthesis complement(3475332..3475718) Escherichia coli str. K-12 substr. MG1655 947852 b3346 CDS yheO NC_000913.3 3475718 3476440 R putative PAS domain-containing DNA-binding transcriptional regulator complement(3475718..3476440) Escherichia coli str. K-12 substr. MG1655 947851 b3347 CDS fkpA NC_000913.3 3476607 3477419 R FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) complement(3476607..3477419) Escherichia coli str. K-12 substr. MG1655 947850 b3348 CDS slyX NC_000913.3 3477640 3477858 D host factor for lysis of phiX174 infection; phi X174 lysis protein 3477640..3477858 Escherichia coli str. K-12 substr. MG1655 947849 b3349 CDS slyD NC_000913.3 3477907 3478497 R FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase); FKBP-type peptidyl prolyl cis-trans isomerase (rotamase) complement(3477907..3478497) Escherichia coli str. K-12 substr. MG1655 947859 b4551 CDS yheV NC_000913.3 3478592 3478792 R DUF2387 family putative metal-binding protein complement(3478592..3478792) Escherichia coli str. K-12 substr. MG1655 1450290 b3350 CDS kefB NC_000913.3 3478802 3480607 R K+ efflux; NEM-activable K+/H+ antiporter; potassium:proton antiporter complement(3478802..3480607) Escherichia coli str. K-12 substr. MG1655 947858 b3351 CDS kefG NC_000913.3 3480607 3481161 R putative NAD(P)H oxidoreductase; potassium-efflux system ancillary protein for KefB, glutathione-regulated complement(3480607..3481161) Escherichia coli str. K-12 substr. MG1655 947857 b3352 CDS yheS NC_000913.3 3481289 3483202 D putative ATP-binding component of a transport system; ABC-F family protein predicted regulatory ATPase 3481289..3483202 Escherichia coli str. K-12 substr. MG1655 947856 b3353 CDS yheT NC_000913.3 3483202 3484224 D UPF0017 family putative hydrolase 3483202..3484224 Escherichia coli str. K-12 substr. MG1655 947855 b3354 CDS yheU NC_000913.3 3484218 3484436 D UPF0270 family protein 3484218..3484436 Escherichia coli str. K-12 substr. MG1655 947863 b3355 CDS prkB NC_000913.3 3484490 3485359 D probable phosphoribulokinase; putative phosphoribulokinase 3484490..3485359 Escherichia coli str. K-12 substr. MG1655 947862 b3356 CDS yhfA NC_000913.3 3485414 3485818 R OsmC family protein complement(3485414..3485818) Escherichia coli str. K-12 substr. MG1655 947860 b3357 CDS crp NC_000913.3 3486120 3486752 D cyclic AMP receptor protein; cAMP-activated global transcription factor, mediator of catabolite repression 3486120..3486752 Escherichia coli str. K-12 substr. MG1655 947867 b3358 CDS yhfK NC_000913.3 3486791 3488893 D putative transporter, FUSC superfamily inner membrane protein 3486791..3488893 Escherichia coli str. K-12 substr. MG1655 947866 b3359 CDS argD NC_000913.3 3488960 3490180 R acetylornithine delta-aminotransferase; bifunctional acetylornithine aminotransferase and succinyldiaminopimelate aminotransferase complement(3488960..3490180) Escherichia coli str. K-12 substr. MG1655 947864 b3360 CDS pabA NC_000913.3 3490266 3490829 R p-aminobenzoate synthetase, component II; aminodeoxychorismate synthase, subunit II complement(3490266..3490829) Escherichia coli str. K-12 substr. MG1655 947873 b3361 CDS fic NC_000913.3 3490861 3491463 R induced in stationary phase, recognized by rpoS, affects cell division; stationary phase-induced protein, putative toxin complement(3490861..3491463) Escherichia coli str. K-12 substr. MG1655 947872 b3362 CDS yhfG NC_000913.3 3491453 3491620 R putative antitoxin for Fic complement(3491453..3491620) Escherichia coli str. K-12 substr. MG1655 947871 b3363 CDS ppiA NC_000913.3 3491725 3492297 R peptidyl-prolyl cis-trans isomerase A (rotamase A) complement(3491725..3492297) Escherichia coli str. K-12 substr. MG1655 947870 b3364 CDS tsgA NC_000913.3 3492568 3493749 D putative transport; putative transporter 3492568..3493749 Escherichia coli str. K-12 substr. MG1655 947869 b3365 CDS nirB NC_000913.3 3494011 3496554 D nitrite reductase (NAD(P)H) subunit; nitrite reductase, large subunit, NAD(P)H-binding 3494011..3496554 Escherichia coli str. K-12 substr. MG1655 947868 b3366 CDS nirD NC_000913.3 3496551 3496877 D nitrite reductase (NAD(P)H) subunit; nitrite reductase (NADH) small subunit 3496551..3496877 Escherichia coli str. K-12 substr. MG1655 947881 b3367 CDS nirC NC_000913.3 3497003 3497809 D nitrite reductase activity; nitrite transporter 3497003..3497809 Escherichia coli str. K-12 substr. MG1655 2847757 b3368 CDS cysG NC_000913.3 3497828 3499201 D uroporphyrinogen III methylase; sirohaeme biosynthesis; fused siroheme synthase 1,3-dimethyluroporphyriongen III dehydrogenase and siroheme ferrochelatase/uroporphyrinogen methyltransferase 3497828..3499201 Escherichia coli str. K-12 substr. MG1655 947880 b3369 CDS yhfL NC_000913.3 3499448 3499615 D small lipoprotein 3499448..3499615 Escherichia coli str. K-12 substr. MG1655 947879 b3370 CDS frlA NC_000913.3 3499910 3501247 D putative amino acid/amine transport protein; putative fructoselysine transporter 3499910..3501247 Escherichia coli str. K-12 substr. MG1655 947878 b3371 CDS frlB NC_000913.3 3501268 3502290 D putative transport protein; fructoselysine-6-P-deglycase 3501268..3502290 Escherichia coli str. K-12 substr. MG1655 947875 b4474 CDS frlC NC_000913.3 3502340 3503170 D putative fructoselysine or fructoselysine 6-P isomerase; fructoselysine 3-epimerase 3502340..3503170 Escherichia coli str. K-12 substr. MG1655 2847758 b3374 CDS frlD NC_000913.3 3503167 3503952 D putative kinase; fructoselysine 6-kinase 3503167..3503952 Escherichia coli str. K-12 substr. MG1655 947886 b3375 CDS frlR NC_000913.3 3504052 3504783 D putative transcriptional regulator; putative DNA-binding transcriptional regulator 3504052..3504783 Escherichia coli str. K-12 substr. MG1655 947885 b3376 CDS yhfS NC_000913.3 3504935 3506020 R FNR-regulated pyridoxal phosphate-dependent aminotransferase family protein complement(3504935..3506020) Escherichia coli str. K-12 substr. MG1655 947884 b3377 CDS yhfT NC_000913.3 3506032 3507336 R putative transport system permease protein; inner membrane protein complement(3506032..3507336) Escherichia coli str. K-12 substr. MG1655 947883 b3378 CDS yhfU NC_000913.3 3507348 3507701 R DUF2620 family protein complement(3507348..3507701) Escherichia coli str. K-12 substr. MG1655 947892 b3379 CDS php NC_000913.3 3507712 3508590 R putative hydrolase; phosphotriesterase homology protein complement(3507712..3508590) Escherichia coli str. K-12 substr. MG1655 947891 b3380 CDS yhfW NC_000913.3 3508587 3509813 R putative mutase; phosphopentomutase-related metalloenzyme superfamily protein complement(3508587..3509813) Escherichia coli str. K-12 substr. MG1655 947890 b3381 CDS yhfX NC_000913.3 3509813 3510976 R putative pyridoxal 5'-phosphate binding protein complement(3509813..3510976) Escherichia coli str. K-12 substr. MG1655 947889 b3382 CDS yhfY NC_000913.3 3511060 3511422 R PRD domain protein complement(3511060..3511422) Escherichia coli str. K-12 substr. MG1655 947888 b3383 CDS yhfZ NC_000913.3 3511439 3512344 R putative DNA-binding transcriptional regulator complement(3511439..3512344) Escherichia coli str. K-12 substr. MG1655 947897 b3384 CDS trpS NC_000913.3 3512634 3513638 R tryptophan tRNA synthetase; tryptophanyl-tRNA synthetase complement(3512634..3513638) Escherichia coli str. K-12 substr. MG1655 947894 b3385 CDS gph NC_000913.3 3513631 3514389 R phosphoglycolate phosphatase complement(3513631..3514389) Escherichia coli str. K-12 substr. MG1655 947895 b3386 CDS rpe NC_000913.3 3514382 3515059 R D-ribulose-5-phosphate 3-epimerase complement(3514382..3515059) Escherichia coli str. K-12 substr. MG1655 947896 b3387 CDS dam NC_000913.3 3515077 3515913 R DNA adenine methyltransferase complement(3515077..3515913) Escherichia coli str. K-12 substr. MG1655 947893 b3388 CDS damX NC_000913.3 3516020 3517306 R putative membrane protein; interferes with cell division; cell division protein that binds to the septal ring complement(3516020..3517306) Escherichia coli str. K-12 substr. MG1655 947930 b3389 CDS aroB NC_000913.3 3517398 3518486 R 3-dehydroquinate synthase complement(3517398..3518486) Escherichia coli str. K-12 substr. MG1655 947927 b3390 CDS aroK NC_000913.3 3518543 3519064 R shikimate kinase I complement(3518543..3519064) Escherichia coli str. K-12 substr. MG1655 2847759 b3391 CDS hofQ NC_000913.3 3519465 3520703 R putative transport portein; DNA catabolic putative fimbrial transporter complement(3519465..3520703) Escherichia coli str. K-12 substr. MG1655 947901 b3392 CDS hofP NC_000913.3 3520615 3521019 R DNA catabolic protein complement(3520615..3521019) Escherichia coli str. K-12 substr. MG1655 947900 b3393 CDS hofO NC_000913.3 3521009 3521449 R DNA catabolic protein complement(3521009..3521449) Escherichia coli str. K-12 substr. MG1655 947899 b3394 CDS hofN NC_000913.3 3521433 3521972 R DNA catabolic putative fimbrial assembly protein complement(3521433..3521972) Escherichia coli str. K-12 substr. MG1655 947898 b3395 CDS hofM NC_000913.3 3521972 3522751 R DNA catabolic putative pilus assembly protein complement(3521972..3522751) Escherichia coli str. K-12 substr. MG1655 947908 b3396 CDS mrcA NC_000913.3 3522871 3525423 D peptidoglycan synthetase; penicillin-binding protein 1A; penicillin-binding protein 1a, murein transglycosylase and transpeptidase 3522871..3525423 Escherichia coli str. K-12 substr. MG1655 947907 b3397 CDS nudE NC_000913.3 3525589 3526149 R adenosine nucleotide hydrolase; Ap3A/Ap2A/ADP-ribose/NADH hydrolase complement(3525589..3526149) Escherichia coli str. K-12 substr. MG1655 947906 b3398 CDS yrfF NC_000913.3 3526469 3528604 D putative dehydrogenase; putative RcsCDB-response attenuator, inner membrane protein 3526469..3528604 Escherichia coli str. K-12 substr. MG1655 947905 b3399 CDS yrfG NC_000913.3 3528669 3529337 D putative phosphatase; GMP/IMP nucleotidase 3528669..3529337 Escherichia coli str. K-12 substr. MG1655 947904 b3400 CDS hslR NC_000913.3 3529348 3529749 D ribosome-associated heat shock protein Hsp15 3529348..3529749 Escherichia coli str. K-12 substr. MG1655 947912 b3401 CDS hslO NC_000913.3 3529774 3530652 D heat shock protein Hsp33 3529774..3530652 Escherichia coli str. K-12 substr. MG1655 947178 b3402 CDS yhgE NC_000913.3 3530715 3532439 R putative transport; DUF4153 family putative inner membrane protein complement(3530715..3532439) Escherichia coli str. K-12 substr. MG1655 947651 b3403 CDS pck NC_000913.3 3532818 3534440 D phosphoenolpyruvate carboxykinase [ATP] 3532818..3534440 Escherichia coli str. K-12 substr. MG1655 945667 b3404 CDS envZ NC_000913.3 3534516 3535868 R protein histidine kinase/phosphatase sensor for OmpR, modulates expression of ompF and ompC; sensory histidine kinase in two-component regulatory system with OmpR complement(3534516..3535868) Escherichia coli str. K-12 substr. MG1655 947272 b3405 CDS ompR NC_000913.3 3535865 3536584 R response regulator (sensor, EnvZ) affecting transcription of ompC and ompF: outer membrane protein synthesis; response regulator in two-component regulatory system with EnvZ complement(3535865..3536584) Escherichia coli str. K-12 substr. MG1655 947913 b3406 CDS greB NC_000913.3 3536812 3537288 D transcription elongation factor and transcript cleavage; transcript cleavage factor 3536812..3537288 Escherichia coli str. K-12 substr. MG1655 2847706 b3407 CDS yhgF NC_000913.3 3537385 3539706 D putative transcriptional accessory protein 3537385..3539706 Escherichia coli str. K-12 substr. MG1655 947911 b3408 CDS feoA NC_000913.3 3540163 3540390 D ferrous iron transport protein A; ferrous iron transporter, protein A 3540163..3540390 Escherichia coli str. K-12 substr. MG1655 947909 b3409 CDS feoB NC_000913.3 3540407 3542728 D ferrous iron transport protein B; ferrous iron transporter protein B and GTP-binding protein; membrane protein 3540407..3542728 Escherichia coli str. K-12 substr. MG1655 947919 b3410 CDS feoC NC_000913.3 3542728 3542964 D putative DNA-binding transcriptional regulator 3542728..3542964 Escherichia coli str. K-12 substr. MG1655 947918 b3411 CDS yhgA NC_000913.3 3543167 3544045 D transposase_31 family protein 3543167..3544045 Escherichia coli str. K-12 substr. MG1655 947917 b3412 CDS bioH NC_000913.3 3544074 3544844 R biotin biosynthesis; reaction prior to pimeloyl CoA; pimeloyl-ACP methyl ester carboxylesterase complement(3544074..3544844) Escherichia coli str. K-12 substr. MG1655 947916 b3413 CDS gntX NC_000913.3 3544882 3545565 D DNA catabolic protein 3544882..3545565 Escherichia coli str. K-12 substr. MG1655 947915 b3414 CDS nfuA NC_000913.3 3545624 3546199 D Fe/S biogenesis protein, putative scaffold/chaperone protein 3545624..3546199 Escherichia coli str. K-12 substr. MG1655 947925 b3415 CDS gntT NC_000913.3 3546559 3547875 D high-affinity transport of gluconate / gluconate permease; gluconate transporter, high-affinity GNT I system 3546559..3547875 Escherichia coli str. K-12 substr. MG1655 947924 b3416 CDS malQ NC_000913.3 3547986 3550070 R 4-alpha-glucanotransferase (amylomaltase) complement(3547986..3550070) Escherichia coli str. K-12 substr. MG1655 947923 b3417 CDS malP NC_000913.3 3550080 3552473 R maltodextrin phosphorylase complement(3550080..3552473) Escherichia coli str. K-12 substr. MG1655 947922 b3418 CDS malT NC_000913.3 3553085 3555790 D positive regulator of mal regulon; mal regulon transcriptional activator 3553085..3555790 Escherichia coli str. K-12 substr. MG1655 947921 b4475 CDS rtcA NC_000913.3 3555833 3556849 R RNA 3'-terminal phosphate cyclase complement(3555833..3556849) Escherichia coli str. K-12 substr. MG1655 2847707 b3421 CDS rtcB NC_000913.3 3556853 3558079 R RNA-splicing ligase complement(3556853..3558079) Escherichia coli str. K-12 substr. MG1655 947929 b3422 CDS rtcR NC_000913.3 3558268 3559866 D sigma54-dependent regulator of rtcBA expression; sigma 54-dependent transcriptional regulator of rtcBA expression 3558268..3559866 Escherichia coli str. K-12 substr. MG1655 947928 b3423 CDS glpR NC_000913.3 3559848 3560605 R pseudogene, DNA-binding transcriptional repressor;regulator; Energy metabolism, carbon: Anaerobic respiration; repressor of the glp operon; <NA> complement(join(3559848..3560453,3560456..3560605)) Escherichia coli str. K-12 substr. MG1655 947926 b3424 CDS glpG NC_000913.3 3560622 3561452 R protein of glp regulon; rhomboid intramembrane serine protease complement(3560622..3561452) Escherichia coli str. K-12 substr. MG1655 947936 b3425 CDS glpE NC_000913.3 3561497 3561823 R rhodanese (thiosulfate:cyanide sulfertransferase); thiosulfate:cyanide sulfurtransferase (rhodanese) complement(3561497..3561823) Escherichia coli str. K-12 substr. MG1655 947935 b3426 CDS glpD NC_000913.3 3562013 3563518 D sn-glycerol-3-phosphate dehydrogenase (aerobic); sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding 3562013..3563518 Escherichia coli str. K-12 substr. MG1655 947934 b3427 CDS yzgL NC_000913.3 3563787 3564005 R pseudogene, periplasmic solute binding protein homology; <NA> complement(3563787..3564005) Escherichia coli str. K-12 substr. MG1655 947933 b3428 CDS glgP NC_000913.3 3564134 3566581 R glycogen phosphorylase complement(3564134..3566581) Escherichia coli str. K-12 substr. MG1655 947931 b3429 CDS glgA NC_000913.3 3566600 3568033 R glycogen synthase complement(3566600..3568033) Escherichia coli str. K-12 substr. MG1655 947932 b3430 CDS glgC NC_000913.3 3568033 3569328 R glucose-1-phosphate adenylyltransferase complement(3568033..3569328) Escherichia coli str. K-12 substr. MG1655 947942 b3431 CDS glgX NC_000913.3 3569346 3571319 R part of glycogen operon, a glycosyl hydrolase, debranching enzyme; glycogen debranching enzyme complement(3569346..3571319) Escherichia coli str. K-12 substr. MG1655 947941 b3432 CDS glgB NC_000913.3 3571316 3573502 R 1,4-alpha-glucan branching enzyme complement(3571316..3573502) Escherichia coli str. K-12 substr. MG1655 947940 b3433 CDS asd NC_000913.3 3573775 3574878 R aspartate-semialdehyde dehydrogenase; aspartate-semialdehyde dehydrogenase, NAD(P)-binding complement(3573775..3574878) Escherichia coli str. K-12 substr. MG1655 947939 b3434 CDS yhgN NC_000913.3 3575071 3575664 D UPF0056 family inner membrane protein 3575071..3575664 Escherichia coli str. K-12 substr. MG1655 947938 b4476 CDS gntU NC_000913.3 3575721 3577061 R split gene, low-affinity gluconate transport permease protein in GNT I system; gluconate transporter, low affinity GNT 1 system complement(3575721..3577061) Escherichia coli str. K-12 substr. MG1655 2847760 b3437 CDS gntK NC_000913.3 3577065 3577592 R gluconokinase 2, thermoresistant; gluconate transport, GNT I system; gluconate kinase 2 complement(3577065..3577592) Escherichia coli str. K-12 substr. MG1655 947937 b3438 CDS gntR NC_000913.3 3577731 3578726 R regulator of gluconate (gnt) operon; d-gluconate inducible gluconate regulon transcriptional repressor complement(3577731..3578726) Escherichia coli str. K-12 substr. MG1655 947946 b3439 CDS yhhW NC_000913.3 3578950 3579645 R quercetinase activity in vitro complement(3578950..3579645) Escherichia coli str. K-12 substr. MG1655 947945 b3440 CDS yhhX NC_000913.3 3579768 3580805 R putative regulator; putative oxidoreductase complement(3579768..3580805) Escherichia coli str. K-12 substr. MG1655 947944 b3441 CDS yhhY NC_000913.3 3581138 3581626 D aminoacyl nucleotide detoxifying acetyltransferase 3581138..3581626 Escherichia coli str. K-12 substr. MG1655 947943 b3442 CDS yhhZ NC_000913.3 3581863 3583041 D putative Hcp1 family polymorphic toxin protein; putative colicin-like DNase/tRNase activity 3581863..3583041 Escherichia coli str. K-12 substr. MG1655 947952 b3443 CDS yrhA NC_000913.3 3583038 3584309 D pseudogene, interrupted by IS1E; <NA> join(3583038..3583418,3584196..3584309) Escherichia coli str. K-12 substr. MG1655 947951 b3444 CDS insA NC_000913.3 3583483 3583758 D IS1 repressor TnpA 3583483..3583758 Escherichia coli str. K-12 substr. MG1655 947950 b3445 CDS insB1 NC_000913.3 3583677 3584180 D IS1 transposase B 3583677..3584180 Escherichia coli str. K-12 substr. MG1655 947949 b3446 CDS yrhB NC_000913.3 3584759 3585043 D stable heat shock chaperone 3584759..3585043 Escherichia coli str. K-12 substr. MG1655 947948 b3447 CDS ggt NC_000913.3 3585081 3586823 R gamma-glutamyltranspeptidase complement(3585081..3586823) Escherichia coli str. K-12 substr. MG1655 947947 b3448 CDS yhhA NC_000913.3 3586943 3587383 D DUF2756 family protein 3586943..3587383 Escherichia coli str. K-12 substr. MG1655 947956 b3449 CDS ugpQ NC_000913.3 3587370 3588113 R glycerophosphodiester phosphodiesterase, cytosolic complement(3587370..3588113) Escherichia coli str. K-12 substr. MG1655 947955 b3450 CDS ugpC NC_000913.3 3588110 3589180 R ATP-binding component of sn-glycerol 3-phosphate transport system; sn-glycerol-3-phosphate ABC transporter ATPase complement(3588110..3589180) Escherichia coli str. K-12 substr. MG1655 947953 b3451 CDS ugpE NC_000913.3 3589182 3590027 R sn-glycerol 3-phosphate transport system, integral membrane protein; membrane component of ABC superfamily; sn-glycerol-3-phosphate ABC transporter permease complement(3589182..3590027) Escherichia coli str. K-12 substr. MG1655 947959 b3452 CDS ugpA NC_000913.3 3590024 3590911 R sn-glycerol 3-phosphate transport system, integral membrane protein; membrane component of ABC superfamily; sn-glycerol-3-phosphate ABC transporter permease complement(3590024..3590911) Escherichia coli str. K-12 substr. MG1655 947957 b3453 CDS ugpB NC_000913.3 3591009 3592325 R sn-glycerol 3-phosphate transport system; periplasmic binding protein; periplasmic-binding component of ABC superfamily; sn-glycerol-3-phosphate ABC transporter periplasmic binding protein complement(3591009..3592325) Escherichia coli str. K-12 substr. MG1655 947962 b3454 CDS livF NC_000913.3 3592724 3593437 R ATP-binding component of leucine transport; branched-chain amino acid ABC transporter ATPase complement(3592724..3593437) Escherichia coli str. K-12 substr. MG1655 947961 b3455 CDS livG NC_000913.3 3593439 3594206 R ATP-binding component of high-affinity branched-chain amino acid transport system; branched-chain amino acid ABC transporter ATPase complement(3593439..3594206) Escherichia coli str. K-12 substr. MG1655 947967 b3456 CDS livM NC_000913.3 3594203 3595480 R high-affinity branched-chain amino acid transport; membrane component of ABC superfamily; branched-chain amino acid ABC transporter permease complement(3594203..3595480) Escherichia coli str. K-12 substr. MG1655 947966 b3457 CDS livH NC_000913.3 3595477 3596403 R high-affinity branched-chain amino acid transport system; membrane component; membrane component of ABC superfamily; branched-chain amino acid ABC transporter permease complement(3595477..3596403) Escherichia coli str. K-12 substr. MG1655 947965 b3458 CDS livK NC_000913.3 3596451 3597560 R high-affinity leucine-specific transport system; periplasmic binding protein; periplasmic-binding component of ABC superfamily; leucine transporter subunit complement(3596451..3597560) Escherichia coli str. K-12 substr. MG1655 947964 b3459 CDS panM NC_000913.3 3597984 3598367 D PanD autocleavage accelerator, panothenate synthesis 3597984..3598367 Escherichia coli str. K-12 substr. MG1655 947963 b3460 CDS livJ NC_000913.3 3598555 3599658 R high-affinity branched-chain amino acid transport protein (ABC superfamily, peri_bind); periplasmic-binding component of ABC superfamily; branched-chain amino acid ABC transporter periplasmic binding protein complement(3598555..3599658) Escherichia coli str. K-12 substr. MG1655 947971 b3461 CDS rpoH NC_000913.3 3599929 3600783 R RNA polymerase, sigma(32) factor; regulation of proteins induced at high temperatures; RNA polymerase, sigma 32 (sigma H) factor complement(3599929..3600783) Escherichia coli str. K-12 substr. MG1655 947970 b3462 CDS ftsX NC_000913.3 3601028 3602086 R cell division membrane protein; putative ABC transporter permease complement(3601028..3602086) Escherichia coli str. K-12 substr. MG1655 947969 b3463 CDS ftsE NC_000913.3 3602079 3602747 R ATP-binding component of a membrane-associated complex involved in cell division; cell division ATP-binding protein complement(3602079..3602747) Escherichia coli str. K-12 substr. MG1655 947968 b3464 CDS ftsY NC_000913.3 3602750 3604243 R cell division membrane protein; Signal Recognition Particle (SRP) receptor complement(3602750..3604243) Escherichia coli str. K-12 substr. MG1655 947978 b3465 CDS rsmD NC_000913.3 3604393 3604989 D 16S rRNA m(2)G966 methyltransferase, SAM-dependent 3604393..3604989 Escherichia coli str. K-12 substr. MG1655 947977 b3466 CDS yhhL NC_000913.3 3604979 3605248 D DUF1145 family protein 3604979..3605248 Escherichia coli str. K-12 substr. MG1655 947976 b3467 CDS yhhM NC_000913.3 3605251 3605610 R putative receptor; DUF2500 family protein complement(3605251..3605610) Escherichia coli str. K-12 substr. MG1655 947975 b3468 CDS yhhN NC_000913.3 3605751 3606377 D putative enzyme; TMEM86 family putative inner membrane protein 3605751..3606377 Escherichia coli str. K-12 substr. MG1655 947973 b3469 CDS zntA NC_000913.3 3606451 3608649 D zinc-transporting ATPase; zinc, cobalt and lead efflux system 3606451..3608649 Escherichia coli str. K-12 substr. MG1655 947972 b3470 CDS tusA NC_000913.3 3608751 3608996 R small protein required for cell growth; affects RpoS stability; small ubiquitous RNA-binding protein required for normal growth, cytoplasmic; mnm(5)-s(2)U34-tRNA 2-thiolation sulfurtransferase complement(3608751..3608996) Escherichia coli str. K-12 substr. MG1655 947974 b3471 CDS yhhQ NC_000913.3 3609217 3609882 D DUF165 family inner membrane protein 3609217..3609882 Escherichia coli str. K-12 substr. MG1655 947984 b3472 CDS dcrB NC_000913.3 3609955 3610512 D putative lipoprotein 3609955..3610512 Escherichia coli str. K-12 substr. MG1655 947983 b3473 CDS yhhS NC_000913.3 3610516 3611733 R putative transport; putative arabinose efflux transporter complement(3610516..3611733) Escherichia coli str. K-12 substr. MG1655 947982 b3474 CDS yhhT NC_000913.3 3611865 3612914 D UPF0118 family putative transporter 3611865..3612914 Escherichia coli str. K-12 substr. MG1655 947980 b3475 CDS acpT NC_000913.3 3612969 3613556 D 4'-phosphopantetheinyl transferase 3612969..3613556 Escherichia coli str. K-12 substr. MG1655 947979 b3476 CDS nikA NC_000913.3 3613667 3615241 D periplasmic binding protein for nickel; periplasmic-binding component of ABC superfamily; nickel/heme ABC transporter periplasmic binding protein 3613667..3615241 Escherichia coli str. K-12 substr. MG1655 947981 b3477 CDS nikB NC_000913.3 3615241 3616185 D transport of nickel, membrane protein; membrane component of ABC superfamily; nickel ABC transporter permease 3615241..3616185 Escherichia coli str. K-12 substr. MG1655 947986 b3478 CDS nikC NC_000913.3 3616182 3617015 D transport of nickel, membrane protein; membrane component of ABC superfamily; nickel ABC transporter permease 3616182..3617015 Escherichia coli str. K-12 substr. MG1655 947990 b3479 CDS nikD NC_000913.3 3617015 3617779 D ATP-binding protein of nickel transport system; ATP-binding component of ABC superfamily; nickel ABC transporter ATPase 3617015..3617779 Escherichia coli str. K-12 substr. MG1655 947989 b3480 CDS nikE NC_000913.3 3617776 3618582 D ATP-binding protein of nickel transport system; ATP-binding component of ABC superfamily; nickel ABC transporter ATPase 3617776..3618582 Escherichia coli str. K-12 substr. MG1655 947987 b3481 CDS nikR NC_000913.3 3618588 3618989 D transcriptional repressor, Ni-binding 3618588..3618989 Escherichia coli str. K-12 substr. MG1655 947995 b3482 CDS rhsB NC_000913.3 3619192 3623427 D rhsB protein in rhs element; Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor 3619192..3623427 Escherichia coli str. K-12 substr. MG1655 947994 b3483 CDS yhhH NC_000913.3 3623399 3623782 D putative NTF2 fold immunity protein for polymorphic toxin RhsB 3623399..3623782 Escherichia coli str. K-12 substr. MG1655 947993 b4552 CDS yrhC NC_000913.3 3623887 3624237 D pseudogene fragment; <NA> 3623887..3624237 Escherichia coli str. K-12 substr. MG1655 1450291 b3484 CDS yhhI NC_000913.3 3624378 3625514 D putative receptor; putative transposase 3624378..3625514 Escherichia coli str. K-12 substr. MG1655 947992 b3485 CDS yhhJ NC_000913.3 3625679 3626803 R putative transporter; putative ABC transporter permease complement(3625679..3626803) Escherichia coli str. K-12 substr. MG1655 947991 b3486 CDS rbbA NC_000913.3 3626803 3629538 R ribosome-associated ATPase, ATP-binding domain (N-terminal); ribosome-associated ATPase: ATP-binding protein/ATP-binding membrane protein complement(3626803..3629538) Escherichia coli str. K-12 substr. MG1655 947998 b3487 CDS yhiI NC_000913.3 3629535 3630602 R putative membrane protein; putative membrane fusion protein (MFP) of efflux pump complement(3629535..3630602) Escherichia coli str. K-12 substr. MG1655 948003 b3488 CDS yhiJ NC_000913.3 3630968 3632590 R DUF4049 family protein complement(3630968..3632590) Escherichia coli str. K-12 substr. MG1655 948001 b4660 CDS yhiL NC_000913.3 3632852 3634458 R pseudogene, DUF4049 family protein; <NA> complement(join(3632852..3633265,3633265..3634458)) Escherichia coli str. K-12 substr. MG1655 947999 b3491 CDS yhiM NC_000913.3 3634841 3635893 D acid resistance protein, inner membrane 3634841..3635893 Escherichia coli str. K-12 substr. MG1655 947997 b3492 CDS yhiN NC_000913.3 3636208 3637410 R putative oxidoreductase complement(3636208..3637410) Escherichia coli str. K-12 substr. MG1655 947996 b3493 CDS pitA NC_000913.3 3637642 3639141 D low-affinity phosphate transport; phosphate transporter, low-affinity; tellurite importer 3637642..3639141 Escherichia coli str. K-12 substr. MG1655 948009 b3494 CDS uspB NC_000913.3 3639385 3639720 R universal stress (ethanol tolerance) protein B complement(3639385..3639720) Escherichia coli str. K-12 substr. MG1655 948008 b3495 CDS uspA NC_000913.3 3640111 3640545 D universal stress protein; broad regulatory function?; universal stress global response regulator 3640111..3640545 Escherichia coli str. K-12 substr. MG1655 948007 b3496 CDS dtpB NC_000913.3 3640862 3642331 D putative transport protein; dipeptide and tripeptide permease B 3640862..3642331 Escherichia coli str. K-12 substr. MG1655 948006 b3497 CDS rsmJ NC_000913.3 3642380 3643132 R 16S rRNA m(2)G1516 methyltransferase, SAM-dependent complement(3642380..3643132) Escherichia coli str. K-12 substr. MG1655 948005 b3498 CDS prlC NC_000913.3 3643140 3645182 R oligopeptidase A complement(3643140..3645182) Escherichia coli str. K-12 substr. MG1655 948016 b3499 CDS rlmJ NC_000913.3 3645385 3646227 D 23S rRNA m(6)A2030 methyltransferase, SAM-dependent 3645385..3646227 Escherichia coli str. K-12 substr. MG1655 948012 b3500 CDS gor NC_000913.3 3646299 3647651 D glutathione oxidoreductase 3646299..3647651 Escherichia coli str. K-12 substr. MG1655 948014 b4613 CDS dinQ NC_000913.3 3647705 3647788 R UV-inducible membrane toxin, DinQ-AgrB type I toxin-antitoxin system complement(3647705..3647788) Escherichia coli str. K-12 substr. MG1655 5061522 b3501 CDS arsR NC_000913.3 3648528 3648881 D transcriptional repressor of chromosomal ars operon; arsenical resistance operon transcriptional repressor; autorepressor 3648528..3648881 Escherichia coli str. K-12 substr. MG1655 948013 b3502 CDS arsB NC_000913.3 3648935 3650224 D arsenical pump membrane protein; arsenite/antimonite transporter 3648935..3650224 Escherichia coli str. K-12 substr. MG1655 948011 b3503 CDS arsC NC_000913.3 3650237 3650662 D arsenate reductase 3650237..3650662 Escherichia coli str. K-12 substr. MG1655 948018 b3504 CDS yhiS NC_000913.3 3651291 3653713 D pseudogene; <NA> join(3651291..3652031,3653231..3653713) Escherichia coli str. K-12 substr. MG1655 948017 b3505 CDS insH1 NC_000913.3 3652182 3653198 R IS5 transposase and trans-activator complement(3652182..3653198) Escherichia coli str. K-12 substr. MG1655 948015 b3506 CDS slp NC_000913.3 3653961 3654527 D outer membrane protein induced after carbon starvation; outer membrane lipoprotein 3653961..3654527 Escherichia coli str. K-12 substr. MG1655 948022 b3507 CDS dctR NC_000913.3 3654683 3655213 D Putative LuxR family repressor for dicarboxylate transport 3654683..3655213 Escherichia coli str. K-12 substr. MG1655 948021 b3508 CDS yhiD NC_000913.3 3655255 3655902 R putative transport ATPase; putative Mg(2+) transport ATPase, inner membrane protein complement(3655255..3655902) Escherichia coli str. K-12 substr. MG1655 948019 b3509 CDS hdeB NC_000913.3 3655966 3656292 R acid-resistance protein complement(3655966..3656292) Escherichia coli str. K-12 substr. MG1655 948026 b3510 CDS hdeA NC_000913.3 3656408 3656740 R stress response protein acid-resistance protein complement(3656408..3656740) Escherichia coli str. K-12 substr. MG1655 948025 b3511 CDS hdeD NC_000913.3 3656995 3657567 D acid-resistance membrane protein 3656995..3657567 Escherichia coli str. K-12 substr. MG1655 948024 b3512 CDS gadE NC_000913.3 3658366 3658893 D gad regulon transcriptional activator 3658366..3658893 Escherichia coli str. K-12 substr. MG1655 948023 b3513 CDS mdtE NC_000913.3 3659232 3660389 D putative membrane protein; anaerobic multidrug efflux transporter, ArcA-regulated 3659232..3660389 Escherichia coli str. K-12 substr. MG1655 948031 b3514 CDS mdtF NC_000913.3 3660414 3663527 D putative transport system permease protein; anaerobic multidrug efflux transporter, ArcA-regulated 3660414..3663527 Escherichia coli str. K-12 substr. MG1655 948030 b3515 CDS gadW NC_000913.3 3663890 3664618 R putative ARAC-type regulatory protein; transcriptional activator of gadA and gadBC; repressor of gadX complement(3663890..3664618) Escherichia coli str. K-12 substr. MG1655 948029 b3516 CDS gadX NC_000913.3 3664986 3665810 R acid resistance regulon transcriptional activator; autoactivator complement(3664986..3665810) Escherichia coli str. K-12 substr. MG1655 948028 b3517 CDS gadA NC_000913.3 3666180 3667580 R glutamate decarboxylase isozyme; glutamate decarboxylase A, PLP-dependent complement(3666180..3667580) Escherichia coli str. K-12 substr. MG1655 948027 b3518 CDS yhjA NC_000913.3 3667791 3669188 R putative cytochrome C peroxidase complement(3667791..3669188) Escherichia coli str. K-12 substr. MG1655 948038 b3519 CDS treF NC_000913.3 3669592 3671241 D cytoplasmic trehalase 3669592..3671241 Escherichia coli str. K-12 substr. MG1655 948037 b3520 CDS yhjB NC_000913.3 3671292 3671894 R putative regulator; putative DNA-binding transcriptional response regulator complement(3671292..3671894) Escherichia coli str. K-12 substr. MG1655 948036 b3521 CDS yhjC NC_000913.3 3672414 3673313 D putative transcriptional regulator LYSR-type; LysR family putative transcriptional regulator 3672414..3673313 Escherichia coli str. K-12 substr. MG1655 948035 b3522 CDS yhjD NC_000913.3 3673362 3674375 D inner membrane putative BrbK family alternate lipid exporter 3673362..3674375 Escherichia coli str. K-12 substr. MG1655 948033 b3523 CDS yhjE NC_000913.3 3674786 3676108 D putative transport protein; putative MFS transporter; membrane protein 3674786..3676108 Escherichia coli str. K-12 substr. MG1655 948032 b3524 CDS yhjG NC_000913.3 3676290 3678350 R putative inner membrane-anchored periplasmic AsmA family protein complement(3676290..3678350) Escherichia coli str. K-12 substr. MG1655 948043 b3525 CDS yhjH NC_000913.3 3678420 3679187 R cyclic-di-GMP phosphodiesterase, FlhDC-regulated complement(3678420..3679187) Escherichia coli str. K-12 substr. MG1655 948042 b3526 CDS kdgK NC_000913.3 3679419 3680348 D 2-dehydro-3-deoxygluconokinase 3679419..3680348 Escherichia coli str. K-12 substr. MG1655 948041 b3527 CDS yhjJ NC_000913.3 3680444 3681940 R putative periplasmic M16 family chaperone complement(3680444..3681940) Escherichia coli str. K-12 substr. MG1655 948040 b3528 CDS dctA NC_000913.3 3682161 3683447 R uptake of C4-dicarboxylic acids; C4-dicarboxylic acid, orotate and citrate transporter complement(3682161..3683447) Escherichia coli str. K-12 substr. MG1655 948039 b3529 CDS yhjK NC_000913.3 3683630 3685618 R cyclic-di-GMP phosphodiesterase complement(3683630..3685618) Escherichia coli str. K-12 substr. MG1655 948048 b3530 CDS bcsC NC_000913.3 3685700 3689173 R putative oxidoreductase subunit; cellulose synthase subunit complement(3685700..3689173) Escherichia coli str. K-12 substr. MG1655 948047 b3531 CDS bcsZ NC_000913.3 3689155 3690261 R endo-1,4-D-glucanase complement(3689155..3690261) Escherichia coli str. K-12 substr. MG1655 948046 b3532 CDS bcsB NC_000913.3 3690268 3692607 R regulator of cellulose synthase, cyclic di-GMP binding complement(3690268..3692607) Escherichia coli str. K-12 substr. MG1655 948045 b3533 CDS bcsA NC_000913.3 3692618 3695236 R putative cellulose synthase; cellulose synthase, catalytic subunit complement(3692618..3695236) Escherichia coli str. K-12 substr. MG1655 948053 b3534 CDS bcsQ NC_000913.3 3695233 3695985 R involved in cellulose production, minD superfamily (pseudogene); <NA> complement(3695233..3695985) Escherichia coli str. K-12 substr. MG1655 948052 b3535 CDS yhjR NC_000913.3 3695997 3696185 R DUF2629 family protein complement(3695997..3696185) Escherichia coli str. K-12 substr. MG1655 948051 b3536 CDS bcsE NC_000913.3 3696458 3698029 D conserved hypothetical protein; Salmonella ortholog implicated in the biosynthesis of cellulose, although the precise role remains unclear; cellulose production protein 3696458..3698029 Escherichia coli str. K-12 substr. MG1655 948050 b3537 CDS bcsF NC_000913.3 3698026 3698217 D DUF2636 family cellulose production small membrane protein 3698026..3698217 Escherichia coli str. K-12 substr. MG1655 948059 b3538 CDS bcsG NC_000913.3 3698214 3699893 D DUF3260 family cellulose production inner membrane protein 3698214..3699893 Escherichia coli str. K-12 substr. MG1655 948058 b4453 CDS ldrD NC_000913.3 3699980 3700087 R small toxic polypeptide; toxic polypeptide, small complement(3699980..3700087) Escherichia coli str. K-12 substr. MG1655 2847730 b3539 CDS yhjV NC_000913.3 3700563 3701834 D putative transporter protein; putative transporter 3700563..3701834 Escherichia coli str. K-12 substr. MG1655 948057 b3540 CDS dppF NC_000913.3 3701864 3702868 R putative ATP-binding component of dipeptide transport system; dipeptide/heme ABC transporter ATPas complement(3701864..3702868) Escherichia coli str. K-12 substr. MG1655 948056 b3541 CDS dppD NC_000913.3 3702865 3703848 R putative ATP-binding component of dipeptide transport system; dipeptide/heme ABC transporter ATPas complement(3702865..3703848) Escherichia coli str. K-12 substr. MG1655 948065 b3542 CDS dppC NC_000913.3 3703859 3704761 R dipeptide transport system permease protein 2; membrane component of ABC superfamily; dipeptide/heme ABC transporter permease complement(3703859..3704761) Escherichia coli str. K-12 substr. MG1655 948064 b3543 CDS dppB NC_000913.3 3704771 3705790 R dipeptide transport system permease protein 1; membrane component of ABC superfamily; dipeptide/heme ABC transporter permease complement(3704771..3705790) Escherichia coli str. K-12 substr. MG1655 948063 b3544 CDS dppA NC_000913.3 3706098 3707705 R dipeptide transport protein; periplasmic-binding component of ABC superfamily; dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor complement(3706098..3707705) Escherichia coli str. K-12 substr. MG1655 948062 b3546 CDS eptB NC_000913.3 3708784 3710475 R KDO phosphoethanolamine transferase, Ca(2+)-inducible complement(3708784..3710475) Escherichia coli str. K-12 substr. MG1655 948068 b3547 CDS yhjX NC_000913.3 3710799 3712007 R putative resistance protein; pyruvate-inducible inner membrane protein, putative transporter complement(3710799..3712007) Escherichia coli str. K-12 substr. MG1655 948066 b3548 CDS yhjY NC_000913.3 3712236 3712934 R putative lipase; autotransporter beta-domain protein complement(3712236..3712934) Escherichia coli str. K-12 substr. MG1655 948073 b3549 CDS tag NC_000913.3 3713092 3713655 D 3-methyl-adenine DNA glycosylase I, constitutive 3713092..3713655 Escherichia coli str. K-12 substr. MG1655 947137 b3550 CDS yiaC NC_000913.3 3713652 3714092 D GNAT family putative N-acetyltransferase 3713652..3714092 Escherichia coli str. K-12 substr. MG1655 946460 b3551 CDS bisC NC_000913.3 3714061 3716394 R biotin sulfoxide reductase complement(3714061..3716394) Escherichia coli str. K-12 substr. MG1655 946915 b3552 CDS yiaD NC_000913.3 3716547 3717206 D putative outer membrane protein; multicopy suppressor of bamB; outer membrane lipoprotein 3716547..3717206 Escherichia coli str. K-12 substr. MG1655 948075 b3553 CDS ghrB NC_000913.3 3717310 3718284 D glyoxylate/hydroxypyruvate reductase B 3717310..3718284 Escherichia coli str. K-12 substr. MG1655 948074 b3554 CDS yiaF NC_000913.3 3718334 3719044 R barrier effect co-colonization resistance factor; DUF3053 family lipoprotein complement(3718334..3719044) Escherichia coli str. K-12 substr. MG1655 948072 b3555 CDS yiaG NC_000913.3 3719478 3719768 D HTH_CROC1 family putative transcriptional regulator 3719478..3719768 Escherichia coli str. K-12 substr. MG1655 948071 b3556 CDS cspA NC_000913.3 3720049 3720261 D cold shock protein 7.4, transcriptional activator of hns; RNA chaperone and antiterminator, cold-inducible 3720049..3720261 Escherichia coli str. K-12 substr. MG1655 948070 b4647 CDS mokA NC_000913.3 3720448 3720632 R pseudogene, overlapping regulatory peptide, enables hokB; completely contained in another CDS; <NA> complement(3720448..3720632) Escherichia coli str. K-12 substr. MG1655 5625573 b4455 CDS hokA NC_000913.3 3720448 3720600 R small toxic membrane polypeptide; IS150 insertion and apparent 39 bp deletion disrupt the associated mokA and sokA genes; completely contained in another CDS; toxic polypeptide, small complement(3720448..3720600) Escherichia coli str. K-12 substr. MG1655 2847732 b3557 CDS insJ NC_000913.3 3720680 3721201 D IS150 transposase A 3720680..3721201 Escherichia coli str. K-12 substr. MG1655 948082 b3558 CDS insK NC_000913.3 3721198 3722049 D IS150 transposase B 3721198..3722049 Escherichia coli str. K-12 substr. MG1655 948081 b3559 CDS glyS NC_000913.3 3722328 3724397 R glycine tRNA synthetase, beta subunit complement(3722328..3724397) Escherichia coli str. K-12 substr. MG1655 948080 b3560 CDS glyQ NC_000913.3 3724407 3725318 R glycine tRNA synthetase, alpha subunit complement(3724407..3725318) Escherichia coli str. K-12 substr. MG1655 948079 b4553 CDS ysaB NC_000913.3 3725413 3725712 R uncharacterized protein complement(3725413..3725712) Escherichia coli str. K-12 substr. MG1655 1450292 b3561 CDS wecH NC_000913.3 3725887 3726882 D O-acetyltransferase for enterobacterial common antigen (ECA) 3725887..3726882 Escherichia coli str. K-12 substr. MG1655 948077 b3562 CDS yiaA NC_000913.3 3726924 3727361 R YiaAB family inner membrane protein, tandem domains complement(3726924..3727361) Escherichia coli str. K-12 substr. MG1655 948078 b3563 CDS yiaB NC_000913.3 3727407 3727748 R YiaAB family inner membrane protein complement(3727407..3727748) Escherichia coli str. K-12 substr. MG1655 948152 b3564 CDS xylB NC_000913.3 3727917 3729371 R xylulokinase complement(3727917..3729371) Escherichia coli str. K-12 substr. MG1655 948133 b3565 CDS xylA NC_000913.3 3729443 3730765 R D-xylose isomerase complement(3729443..3730765) Escherichia coli str. K-12 substr. MG1655 948141 b3566 CDS xylF NC_000913.3 3731131 3732123 D xylose binding protein transport system; periplasmic-binding component of ABC superfamily; D-xylose transporter subunit 3731131..3732123 Escherichia coli str. K-12 substr. MG1655 948090 b3567 CDS xylG NC_000913.3 3732201 3733742 D putative ATP-binding protein of xylose transport system; D-xylose ABC transporter dual domain ATPase 3732201..3733742 Escherichia coli str. K-12 substr. MG1655 948127 b3568 CDS xylH NC_000913.3 3733720 3734901 D putative xylose transport, membrane component; membrane component of ABC superfamily; D-xylose ABC transporter permease 3733720..3734901 Escherichia coli str. K-12 substr. MG1655 948083 b3569 CDS xylR NC_000913.3 3734979 3736157 D putative regulator of xyl operon; xylose divergent operon transcriptional activator 3734979..3736157 Escherichia coli str. K-12 substr. MG1655 948086 b3570 CDS bax NC_000913.3 3736353 3737177 R putative ATP-binding protein; putative glucosaminidase complement(3736353..3737177) Escherichia coli str. K-12 substr. MG1655 948089 b3571 CDS malS NC_000913.3 3737497 3739527 D alpha-amylase 3737497..3739527 Escherichia coli str. K-12 substr. MG1655 948088 b3572 CDS avtA NC_000913.3 3739705 3740958 D alanine-alpha-ketoisovalerate (or valine-pyruvate) transaminase, transaminase C; valine-pyruvate aminotransferase; transaminase C; alanine-valine transaminase 3739705..3740958 Escherichia coli str. K-12 substr. MG1655 948087 b3573 CDS ysaA NC_000913.3 3741109 3741582 R putative hydrogenase, 4Fe-4S ferredoxin-type component complement(3741109..3741582) Escherichia coli str. K-12 substr. MG1655 948085 b3574 CDS yiaJ NC_000913.3 3741684 3742532 R transcriptional repressor for the yiaKLMNO-lyxK-sgbHUE operon complement(3741684..3742532) Escherichia coli str. K-12 substr. MG1655 948084 b3575 CDS yiaK NC_000913.3 3742733 3743731 D putative dehydrogenase; 2,3-diketo-L-gulonate reductase, NADH-dependent 3742733..3743731 Escherichia coli str. K-12 substr. MG1655 948096 b3576 CDS yiaL NC_000913.3 3743743 3744210 D putative lipase; DUF386 family protein 3743743..3744210 Escherichia coli str. K-12 substr. MG1655 948094 b3577 CDS yiaM NC_000913.3 3744328 3744801 D 2,3-diketo-L-gulonate TRAP transporter small permease protein 3744328..3744801 Escherichia coli str. K-12 substr. MG1655 948093 b3578 CDS yiaN NC_000913.3 3744804 3746081 D putative membrane protein; 2,3-diketo-L-gulonate TRAP transporter large permease protein 3744804..3746081 Escherichia coli str. K-12 substr. MG1655 948092 b3579 CDS yiaO NC_000913.3 3746094 3747080 D putative solute-binding transport protein; 2,3-diketo-L-gulonate-binding periplasmic protein 3746094..3747080 Escherichia coli str. K-12 substr. MG1655 948091 b3580 CDS lyxK NC_000913.3 3747084 3748580 D L-xylulose kinase, cryptic; L-xylulose kinase 3747084..3748580 Escherichia coli str. K-12 substr. MG1655 948101 b3581 CDS sgbH NC_000913.3 3748577 3749239 D probable 3-hexulose 6-phosphate synthase; 3-keto-L-gulonate 6-phosphate decarboxylase 3748577..3749239 Escherichia coli str. K-12 substr. MG1655 948098 b3582 CDS sgbU NC_000913.3 3749232 3750092 D putative L-xylulose 5-phosphate 3-epimerase 3749232..3750092 Escherichia coli str. K-12 substr. MG1655 948100 b3583 CDS sgbE NC_000913.3 3750086 3750781 D L-ribulose-5-phosphate 4-epimerase 3750086..3750781 Escherichia coli str. K-12 substr. MG1655 948099 b4648 CDS ysaC NC_000913.3 3750813 3750914 R pseudogene; <NA> complement(3750813..3750914) Escherichia coli str. K-12 substr. MG1655 5625574 b4649 CDS ysaD NC_000913.3 3750918 3751109 D pseudogene, internal sequence remnant; <NA> 3750918..3751109 Escherichia coli str. K-12 substr. MG1655 5625575 b3584 CDS yiaT NC_000913.3 3751128 3751868 R putative outer membrane protein complement(3751128..3751868) Escherichia coli str. K-12 substr. MG1655 948097 b3585 CDS yiaU NC_000913.3 3751992 3752966 D putative transcriptional regulator LYSR-type; putative DNA-binding transcriptional regulator 3751992..3752966 Escherichia coli str. K-12 substr. MG1655 948107 b3586 CDS yiaV NC_000913.3 3752963 3754099 R putative membrane protein; signal-anchored membrane fusion protein (MFP) component of efflux pump complement(3752963..3754099) Escherichia coli str. K-12 substr. MG1655 948106 b3587 CDS yiaW NC_000913.3 3754105 3754428 R DUF3302 family inner membrane protein complement(3754105..3754428) Escherichia coli str. K-12 substr. MG1655 948105 b3588 CDS aldB NC_000913.3 3754973 3756511 R aldehyde dehydrogenase B (lactaldehyde dehydrogenase); aldehyde dehydrogenase B complement(3754973..3756511) Escherichia coli str. K-12 substr. MG1655 948104 b3589 CDS yiaY NC_000913.3 3756676 3757827 R putative oxidoreductase; L-threonine dehydrogenase complement(3756676..3757827) Escherichia coli str. K-12 substr. MG1655 948102 b3590 CDS selB NC_000913.3 3758017 3759861 R selenocysteinyl-tRNA-specific translation factor complement(3758017..3759861) Escherichia coli str. K-12 substr. MG1655 948103 b3591 CDS selA NC_000913.3 3759858 3761249 R selenocysteine synthase: L-seryl-tRNA (Ser) selenium transferase; selenocysteine synthase complement(3759858..3761249) Escherichia coli str. K-12 substr. MG1655 948124 b3592 CDS yibF NC_000913.3 3761347 3761955 R putative S-transferase; glutathione S-transferase homolog complement(3761347..3761955) Escherichia coli str. K-12 substr. MG1655 948113 b3593 CDS rhsA NC_000913.3 3762183 3766316 D rhsA protein in rhs element; Rhs protein with putative toxin 55 domain; putative polysaccharide synthesis/export protein; putative neighboring cell growth inhibitor 3762183..3766316 Escherichia coli str. K-12 substr. MG1655 948120 b3594 CDS yibA NC_000913.3 3766337 3767179 D putative immunity protein for polymorphic toxin RhsA; HEAT-domain protein; lethality reduction protein 3766337..3767179 Escherichia coli str. K-12 substr. MG1655 948108 b3595 CDS rhsJ NC_000913.3 3767221 3768165 D Rhs-family protein; <NA> 3767221..3768165 Escherichia coli str. K-12 substr. MG1655 948112 b3596 CDS yibG NC_000913.3 3768177 3768638 D TPR-like repeat protein 3768177..3768638 Escherichia coli str. K-12 substr. MG1655 948111 b4650 CDS yibS NC_000913.3 3768639 3768890 D pseudogene, Rhs family protein; <NA> 3768639..3768890 Escherichia coli str. K-12 substr. MG1655 5625576 b4651 CDS yibW NC_000913.3 3768892 3769256 D pseudogene, rhsA-linked; <NA> join(3768892..3768975,3768975..3769256) Escherichia coli str. K-12 substr. MG1655 5625577 b4615 CDS yibV NC_000913.3 3769345 3769783 D pseudogene, putative cryptic Rhs immunity protein; <NA> join(3769345..3769671,3769673..3769783) Escherichia coli str. K-12 substr. MG1655 5061524 b4652 CDS yibU NC_000913.3 3769948 3770146 D pseudogene, H repeat-associated protein; <NA> join(3769948..3770034,3770033..3770146) Escherichia coli str. K-12 substr. MG1655 5625578 b3597 CDS yibH NC_000913.3 3770243 3771379 R putative membrane protein; putative membrane fusion protein (MFP) component of efflux pump complement(3770243..3771379) Escherichia coli str. K-12 substr. MG1655 948110 b3598 CDS yibI NC_000913.3 3771382 3771744 R DUF3302 family inner membrane protein complement(3771382..3771744) Escherichia coli str. K-12 substr. MG1655 948109 b3599 CDS mtlA NC_000913.3 3772281 3774194 D PTS system, mannitol-specific enzyme IIABC components; mannitol-specific PTS enzyme: IIA, IIB and IIC components 3772281..3774194 Escherichia coli str. K-12 substr. MG1655 948118 b3600 CDS mtlD NC_000913.3 3774424 3775572 D mannitol-1-phosphate dehydrogenase; mannitol-1-phosphate dehydrogenase, NAD-dependent 3774424..3775572 Escherichia coli str. K-12 substr. MG1655 948117 b3601 CDS mtlR NC_000913.3 3775572 3776159 D repressor for mtl; mannitol operon repressor 3775572..3776159 Escherichia coli str. K-12 substr. MG1655 948116 b4554 CDS yibT NC_000913.3 3776171 3776380 R uncharacterized protein complement(3776171..3776380) Escherichia coli str. K-12 substr. MG1655 1450299 b3602 CDS yibL NC_000913.3 3776665 3777027 D ribosome-associated DUF2810 family protein 3776665..3777027 Escherichia coli str. K-12 substr. MG1655 948115 b3603 CDS lldP NC_000913.3 3777399 3779054 D L-lactate permease 3777399..3779054 Escherichia coli str. K-12 substr. MG1655 948114 b3604 CDS lldR NC_000913.3 3779054 3779830 D transcriptional regulator; dual role activator/repressor for lldPRD operon 3779054..3779830 Escherichia coli str. K-12 substr. MG1655 948122 b3605 CDS lldD NC_000913.3 3779827 3781017 D L-lactate dehydrogenase; L-lactate dehydrogenase, FMN-linked 3779827..3781017 Escherichia coli str. K-12 substr. MG1655 948121 b3606 CDS trmL NC_000913.3 3781215 3781688 D tRNA Leu mC34,mU34 2'-O-methyltransferase, SAM-dependent 3781215..3781688 Escherichia coli str. K-12 substr. MG1655 948119 b3607 CDS cysE NC_000913.3 3781741 3782562 R serine acetyltransferase complement(3781741..3782562) Escherichia coli str. K-12 substr. MG1655 948126 b3608 CDS gpsA NC_000913.3 3782642 3783661 R glycerol-3-phosphate dehydrogenase (NAD+) complement(3782642..3783661) Escherichia coli str. K-12 substr. MG1655 948125 b3609 CDS secB NC_000913.3 3783661 3784128 R protein export; molecular chaperone; may bind to signel sequence; protein export chaperone complement(3783661..3784128) Escherichia coli str. K-12 substr. MG1655 948123 b3610 CDS grxC NC_000913.3 3784191 3784442 R glutaredoxin 3 complement(3784191..3784442) Escherichia coli str. K-12 substr. MG1655 948132 b3611 CDS yibN NC_000913.3 3784584 3785015 R putative rhodanese-related sulfurtransferase complement(3784584..3785015) Escherichia coli str. K-12 substr. MG1655 948131 b3612 CDS gpmM NC_000913.3 3785260 3786804 D putative 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; phosphoglycero mutase III, cofactor-independent 3785260..3786804 Escherichia coli str. K-12 substr. MG1655 948130 b3613 CDS envC NC_000913.3 3786838 3788097 D putative membrane protein; activator of AmiB,C murein hydrolases, septal ring factor 3786838..3788097 Escherichia coli str. K-12 substr. MG1655 948129 b3614 CDS yibQ NC_000913.3 3788101 3789060 D putative polysaccharide deacetylase 3788101..3789060 Escherichia coli str. K-12 substr. MG1655 948128 b3615 CDS waaH NC_000913.3 3789047 3790081 R putative regulator; LPS(HepIII)-glucuronic acid glycosyltransferase complement(3789047..3790081) Escherichia coli str. K-12 substr. MG1655 948140 b3616 CDS tdh NC_000913.3 3790320 3791345 R threonine dehydrogenase; L-threonine 3-dehydrogenase, NAD(P)-binding complement(3790320..3791345) Escherichia coli str. K-12 substr. MG1655 948139 b3617 CDS kbl NC_000913.3 3791355 3792551 R 2-amino-3-ketobutyrate CoA ligase (glycine acetyltransferase); glycine C-acetyltransferase complement(3791355..3792551) Escherichia coli str. K-12 substr. MG1655 948138 b3618 CDS yibB NC_000913.3 3792826 3793683 R involved in lipopolysaccharide biosynthesis; YibB family protein, function unknown complement(3792826..3793683) Escherichia coli str. K-12 substr. MG1655 948137 b3619 CDS hldD NC_000913.3 3793987 3794919 D ADP-L-glycero-D-mannoheptose-6-epimerase; ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding 3793987..3794919 Escherichia coli str. K-12 substr. MG1655 948134 b3620 CDS waaF NC_000913.3 3794929 3795975 D ADP-heptose--lps heptosyltransferase II; lipopolysaccharide core biosynthesis; ADP-heptose:LPS heptosyltransferase II 3794929..3795975 Escherichia coli str. K-12 substr. MG1655 948135 b3621 CDS waaC NC_000913.3 3795979 3796938 D heptosyl transferase I; lipopolysaccharide core biosynthesis; ADP-heptose:LPS heptosyl transferase I 3795979..3796938 Escherichia coli str. K-12 substr. MG1655 948136 b3622 CDS waaL NC_000913.3 3796948 3798207 D O-antigen ligase; lipopolysaccharide core biosynthesis; O-antigen ligase 3796948..3798207 Escherichia coli str. K-12 substr. MG1655 948148 b3623 CDS waaU NC_000913.3 3798239 3799312 R probably hexose transferase; lipopolysaccharide core biosynthesis; lipopolysaccharide core biosynthesis complement(3798239..3799312) Escherichia coli str. K-12 substr. MG1655 948147 b3624 CDS waaZ NC_000913.3 3799345 3800196 R lipopolysaccharide core biosynthesis; lipopolysaccharide KdoIII transferase; lipopolysaccharide core biosynthesis protein complement(3799345..3800196) Escherichia coli str. K-12 substr. MG1655 948146 b3625 CDS waaY NC_000913.3 3800267 3800965 R lipopolysaccharide core biosynthesis; lipopolysaccharide core biosynthesis protein complement(3800267..3800965) Escherichia coli str. K-12 substr. MG1655 948145 b3626 CDS waaR NC_000913.3 3800983 3801999 R lipopolysaccharide 1,2-glucosyltransferase; UDP-glucose:(glucosyl)LPS alpha-1,2-glucosyltransferase complement(3800983..3801999) Escherichia coli str. K-12 substr. MG1655 948142 b3627 CDS waaO NC_000913.3 3802039 3803058 R UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase; UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase complement(3802039..3803058) Escherichia coli str. K-12 substr. MG1655 948143 b3628 CDS waaB NC_000913.3 3803058 3804137 R lipopolysaccharide 1,6-galactosyltransferase; UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase complement(3803058..3804137) Escherichia coli str. K-12 substr. MG1655 948144 b3629 CDS waaS NC_000913.3 3804181 3805116 R lipopolysaccharide core biosynthesis; lipopolysaccharide rhamnose:KdoIII transferase; lipopolysaccharide core biosynthesis protein complement(3804181..3805116) Escherichia coli str. K-12 substr. MG1655 948151 b3630 CDS waaP NC_000913.3 3805153 3805950 R lipopolysaccharide core biosynthesis; phosphorylation of core heptose; attaches phosphate-containing substrate to LPS co; kinase that phosphorylates core heptose of lipopolysaccharide complement(3805153..3805950) Escherichia coli str. K-12 substr. MG1655 948150 b3631 CDS waaG NC_000913.3 3805943 3807067 R glucosyltransferase I; lipopolysaccharide core biosynthesis; UDP-glucose:(heptosyl)lipopolysaccharide alpha-1,3-glucosyltransferase; lipopolysaccharide core biosynthesis protein; lipopolysaccharide glucosyltransferase I complement(3805943..3807067) Escherichia coli str. K-12 substr. MG1655 948149 b3632 CDS waaQ NC_000913.3 3807064 3808098 R lipopolysaccharide core biosynthesis; lipopolysaccharide core biosynthesis protein complement(3807064..3808098) Escherichia coli str. K-12 substr. MG1655 948155 b3633 CDS waaA NC_000913.3 3808540 3809817 D 3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase) 3808540..3809817 Escherichia coli str. K-12 substr. MG1655 949048 b3634 CDS coaD NC_000913.3 3809825 3810304 D pantetheine-phosphate adenylyltransferase 3809825..3810304 Escherichia coli str. K-12 substr. MG1655 947386 b3635 CDS mutM NC_000913.3 3810343 3811152 R formamidopyrimidine DNA glycosylase; formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase complement(3810343..3811152) Escherichia coli str. K-12 substr. MG1655 946765 b3636 CDS rpmG NC_000913.3 3811250 3811417 R 50S ribosomal subunit protein L33 complement(3811250..3811417) Escherichia coli str. K-12 substr. MG1655 946318 b3637 CDS rpmB NC_000913.3 3811438 3811674 R 50S ribosomal subunit protein L28 complement(3811438..3811674) Escherichia coli str. K-12 substr. MG1655 946941 b3638 CDS yicR NC_000913.3 3811891 3812559 R DNA repair protein; UPF0758 family protein complement(3811891..3812559) Escherichia coli str. K-12 substr. MG1655 948968 b3639 CDS dfp NC_000913.3 3812731 3813951 D flavoprotein affecting synthesis of DNA and pantothenate metabolism; fused 4'-phosphopantothenoylcysteine decarboxylase/phosphopantothenoylcysteine synthetase, FMN-binding 3812731..3813951 Escherichia coli str. K-12 substr. MG1655 949047 b3640 CDS dut NC_000913.3 3813932 3814387 D deoxyuridinetriphosphatase 3813932..3814387 Escherichia coli str. K-12 substr. MG1655 948607 b3641 CDS slmA NC_000913.3 3814494 3815090 D putative transcriptional regulator; nucleoid occlusion factor, anti-FtsZ division inhibitor 3814494..3815090 Escherichia coli str. K-12 substr. MG1655 948158 b3642 CDS pyrE NC_000913.3 3815127 3815768 R orotate phosphoribosyltransferase complement(3815127..3815768) Escherichia coli str. K-12 substr. MG1655 948157 b3643 CDS rph NC_000913.3 3815834 3816549 R ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH; <NA> complement(join(3815834..3815881,3815881..3816549)) Escherichia coli str. K-12 substr. MG1655 948156 b3644 CDS yicC NC_000913.3 3816676 3817539 D putative alpha helix protein; UPF0701 family protein 3816676..3817539 Escherichia coli str. K-12 substr. MG1655 948154 b3645 CDS dinD NC_000913.3 3817760 3818584 D DNA damage-inducible protein 3817760..3818584 Escherichia coli str. K-12 substr. MG1655 948153 b3646 CDS yicG NC_000913.3 3818874 3819491 D UPF0126 family inner membrane protein 3818874..3819491 Escherichia coli str. K-12 substr. MG1655 948165 b3647 CDS ligB NC_000913.3 3819488 3821170 R putative enzyme; DNA ligase, NAD(+)-dependent complement(3819488..3821170) Escherichia coli str. K-12 substr. MG1655 948164 b3648 CDS gmk NC_000913.3 3821428 3822051 D guanylate kinase 3821428..3822051 Escherichia coli str. K-12 substr. MG1655 948163 b3649 CDS rpoZ NC_000913.3 3822106 3822381 D RNA polymerase, omega subunit 3822106..3822381 Escherichia coli str. K-12 substr. MG1655 948160 b3650 CDS spoT NC_000913.3 3822400 3824508 D (p)ppGpp synthetase II; also guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase; bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase 3822400..3824508 Escherichia coli str. K-12 substr. MG1655 948159 b3651 CDS trmH NC_000913.3 3824515 3825204 D tRNA mG18-2'-O-methyltransferase, SAM-dependent 3824515..3825204 Escherichia coli str. K-12 substr. MG1655 948161 b3652 CDS recG NC_000913.3 3825210 3827291 D DNA helicase, resolution of Holliday junctions, branch migration; ATP-dependent DNA helicase 3825210..3827291 Escherichia coli str. K-12 substr. MG1655 948162 b3653 CDS gltS NC_000913.3 3827460 3828665 R glutamate transport; glutamate transporter complement(3827460..3828665) Escherichia coli str. K-12 substr. MG1655 948166 b3654 CDS xanP NC_000913.3 3828945 3830336 D putative transport protein; xanthine permease 3828945..3830336 Escherichia coli str. K-12 substr. MG1655 948172 b3655 CDS yicH NC_000913.3 3830457 3832166 D putative inner membrane-anchored periplasmic AsmA family protein 3830457..3832166 Escherichia coli str. K-12 substr. MG1655 948171 b3656 CDS yicI NC_000913.3 3832219 3834537 R putative alpha-glucosidase complement(3832219..3834537) Escherichia coli str. K-12 substr. MG1655 948169 b3657 CDS yicJ NC_000913.3 3834547 3835929 R putative permease; putative transporter complement(3834547..3835929) Escherichia coli str. K-12 substr. MG1655 948168 b4653 CDS yicT NC_000913.3 3836425 3836556 D pseudogene; <NA> 3836425..3836556 Escherichia coli str. K-12 substr. MG1655 5625579 b3659 CDS setC NC_000913.3 3836953 3838137 D two-module transport protein; putative arabinose efflux transporter 3836953..3838137 Escherichia coli str. K-12 substr. MG1655 948177 b3660 CDS yicL NC_000913.3 3838248 3839171 D putative permease transporter; EamA family inner membrane putative transporter 3838248..3839171 Escherichia coli str. K-12 substr. MG1655 948176 b3661 CDS nlpA NC_000913.3 3839175 3839993 R lipoprotein-28; cytoplasmic membrane lipoprotein-28 complement(3839175..3839993) Escherichia coli str. K-12 substr. MG1655 948175 b4555 CDS yicS NC_000913.3 3840215 3840508 D putative periplasmic protein 3840215..3840508 Escherichia coli str. K-12 substr. MG1655 1450300 b3662 CDS nepI NC_000913.3 3840549 3841739 R putative transport protein; putative transporter complement(3840549..3841739) Escherichia coli str. K-12 substr. MG1655 948213 b3663 CDS yicN NC_000913.3 3841950 3842402 R DUF1198 family protein complement(3841950..3842402) Escherichia coli str. K-12 substr. MG1655 948173 b3664 CDS adeQ NC_000913.3 3842455 3843789 R adenine permease, high affinity; adenine:H+ symporter complement(3842455..3843789) Escherichia coli str. K-12 substr. MG1655 948174 b3665 CDS adeD NC_000913.3 3843964 3845730 D cryptic adenine deaminase 3843964..3845730 Escherichia coli str. K-12 substr. MG1655 948210 b3666 CDS uhpT NC_000913.3 3845776 3847167 R hexose phosphate transport protein; hexose phosphate transporter complement(3845776..3847167) Escherichia coli str. K-12 substr. MG1655 948201 b3667 CDS uhpC NC_000913.3 3847305 3848624 R regulator of uhpT; membrane protein regulates uhpT expression complement(3847305..3848624) Escherichia coli str. K-12 substr. MG1655 948184 b3668 CDS uhpB NC_000913.3 3848634 3850136 R sensor histidine protein kinase phosphorylates UhpA; sensory histidine kinase in two-component regulatory sytem with UhpA complement(3848634..3850136) Escherichia coli str. K-12 substr. MG1655 948195 b3669 CDS uhpA NC_000913.3 3850136 3850726 R response regulator, positive activator of uhpT transcription (sensor, uhpB); response regulator in two-component regulatory system wtih UhpB complement(3850136..3850726) Escherichia coli str. K-12 substr. MG1655 948178 b3670 CDS ilvN NC_000913.3 3850802 3851092 R acetolactate synthase I, valine sensitive, small subunit; acetolactate synthase 1 small subunit complement(3850802..3851092) Escherichia coli str. K-12 substr. MG1655 948183 b3671 CDS ilvB NC_000913.3 3851096 3852784 R acetolactate synthase I,valine-sensitive, large subunit; acetolactate synthase 2 large subunit complement(3851096..3852784) Escherichia coli str. K-12 substr. MG1655 948182 b3672 CDS ivbL NC_000913.3 3852890 3852988 R ilvB operon leader peptide complement(3852890..3852988) Escherichia coli str. K-12 substr. MG1655 948181 b4618 CDS tisB NC_000913.3 3853553 3853642 D toxic membrane persister formation peptide, LexA-regulated 3853553..3853642 Escherichia coli str. K-12 substr. MG1655 5061527 b3673 CDS emrD NC_000913.3 3853922 3855106 D 2-module integral membrane pump; multidrug resistance; multidrug efflux system protein 3853922..3855106 Escherichia coli str. K-12 substr. MG1655 948180 b3674 CDS yidF NC_000913.3 3855114 3855611 R putative transcriptional regulator; putative Cys-type oxidative YidJ-maturating enzyme complement(3855114..3855611) Escherichia coli str. K-12 substr. MG1655 948179 b3675 CDS yidG NC_000913.3 3855608 3855970 R inner membrane protein complement(3855608..3855970) Escherichia coli str. K-12 substr. MG1655 948191 b3676 CDS yidH NC_000913.3 3855960 3856307 R DUF202 family inner membrane protein complement(3855960..3856307) Escherichia coli str. K-12 substr. MG1655 948190 b3677 CDS yidI NC_000913.3 3856415 3856864 D inner membrane protein 3856415..3856864 Escherichia coli str. K-12 substr. MG1655 948189 b3678 CDS yidJ NC_000913.3 3856911 3858404 R putative sulfatase; sulfatase/phosphatase superfamily protein complement(3856911..3858404) Escherichia coli str. K-12 substr. MG1655 948188 b3679 CDS yidK NC_000913.3 3858401 3860116 R putative cotransporter; putative transporter complement(3858401..3860116) Escherichia coli str. K-12 substr. MG1655 948185 b3680 CDS yidL NC_000913.3 3860283 3861176 D putative ARAC-type regulatory protein; AraC family putative transcriptional regulator 3860283..3861176 Escherichia coli str. K-12 substr. MG1655 948186 b4556 CDS glvG NC_000913.3 3861173 3861987 R pseudogene; probable 6-phospho-beta-glucosidase; <NA> complement(3861173..3861987) Escherichia coli str. K-12 substr. MG1655 1450301 b3683 CDS glvC NC_000913.3 3861987 3863603 R pseudogene, arbutin specific enzyme IIC component of PTS;enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system, arbutin-like IIB component; PTS system, arbutin-like IIC component; <NA> complement(3861987..3863603) Escherichia coli str. K-12 substr. MG1655 2847721 b3684 CDS yidP NC_000913.3 3863899 3864615 D putative transcriptional regulator; UTRA domain-containing GntR family putative transcriptional regulator 3863899..3864615 Escherichia coli str. K-12 substr. MG1655 948194 b3685 CDS yidE NC_000913.3 3864612 3866273 R putative transport protein; putative transporter complement(3864612..3866273) Escherichia coli str. K-12 substr. MG1655 948193 b3686 CDS ibpB NC_000913.3 3866469 3866897 R heat shock protein; heat shock chaperone complement(3866469..3866897) Escherichia coli str. K-12 substr. MG1655 948192 b3687 CDS ibpA NC_000913.3 3867009 3867422 R heat shock protein; heat shock chaperone complement(3867009..3867422) Escherichia coli str. K-12 substr. MG1655 948200 b3688 CDS yidQ NC_000913.3 3867728 3868060 D DUF1375 family outer membrane protein 3867728..3868060 Escherichia coli str. K-12 substr. MG1655 948199 b3689 CDS yidR NC_000913.3 3868062 3869309 R DUF3748 family protein complement(3868062..3869309) Escherichia coli str. K-12 substr. MG1655 948198 b3690 CDS cbrA NC_000913.3 3869377 3870441 D colicin M resistance protein; FAD-binding protein, putative oxidoreductase 3869377..3870441 Escherichia coli str. K-12 substr. MG1655 948197 b3691 CDS dgoT NC_000913.3 3870438 3871730 R D-galactonate transport; D-galactonate transporter complement(3870438..3871730) Escherichia coli str. K-12 substr. MG1655 948196 b4478 CDS dgoD NC_000913.3 3871850 3872998 R D-galactonate dehydratase complement(3871850..3872998) Escherichia coli str. K-12 substr. MG1655 2847765 b4477 CDS dgoA NC_000913.3 3872995 3873612 R 2-oxo-3-deoxygalactonate 6-phosphate aldolase complement(3872995..3873612) Escherichia coli str. K-12 substr. MG1655 2847766 b3693 CDS dgoK NC_000913.3 3873596 3874474 R 2-oxo-3-deoxygalactonate kinase complement(3873596..3874474) Escherichia coli str. K-12 substr. MG1655 948207 b4479 CDS dgoR NC_000913.3 3874471 3875160 R transcriptional repressor for galactonate utilization (GntR family); D-galactonate catabolism operon transcriptional repressor complement(3874471..3875160) Escherichia coli str. K-12 substr. MG1655 2847767 b3696 CDS yidX NC_000913.3 3875438 3876094 D putative replicase EC 2.7.-; putative lipoprotein 3875438..3876094 Escherichia coli str. K-12 substr. MG1655 948202 b3697 CDS yidA NC_000913.3 3876140 3876952 R sugar phosphate phosphatase complement(3876140..3876952) Escherichia coli str. K-12 substr. MG1655 948204 b3698 CDS yidB NC_000913.3 3877067 3877465 R DUF937 family protein complement(3877067..3877465) Escherichia coli str. K-12 substr. MG1655 948212 b3699 CDS gyrB NC_000913.3 3877705 3880119 R DNA gyrase subunit B, type II topoisomerase, ATPase activity; DNA gyrase, subunit B complement(3877705..3880119) Escherichia coli str. K-12 substr. MG1655 948211 b3700 CDS recF NC_000913.3 3880148 3881221 R ssDNA and dsDNA binding, ATP binding; gap repair protein complement(3880148..3881221) Escherichia coli str. K-12 substr. MG1655 948209 b3701 CDS dnaN NC_000913.3 3881221 3882321 R DNA polymerase III, beta-subunit; DNA polymerase III, beta subunit complement(3881221..3882321) Escherichia coli str. K-12 substr. MG1655 948218 b3702 CDS dnaA NC_000913.3 3882326 3883729 R DNA biosynthesis; initiation of chromosome replication; can be transcription regulator; chromosomal replication initiator protein DnaA, DNA-binding transcriptional dual regulator complement(3882326..3883729) Escherichia coli str. K-12 substr. MG1655 948217 b3703 CDS rpmH NC_000913.3 3884336 3884476 D 50S ribosomal subunit protein L34 3884336..3884476 Escherichia coli str. K-12 substr. MG1655 948216 b3704 CDS rnpA NC_000913.3 3884493 3884852 D RNase P is an essential enzyme responsible for the processing of the 5' ends of precursors to tRNA, 4.5S RNA, and other naturally occurring stable RNA molecules; RNase P also affects gene expression of polycistronic operon mRNAs; protein C5 component of RNase P 3884493..3884852 Escherichia coli str. K-12 substr. MG1655 948215 b4557 CDS yidD NC_000913.3 3884816 3885073 D membrane protein insertion efficiency factor, UPF0161 family inner membrane protein 3884816..3885073 Escherichia coli str. K-12 substr. MG1655 1450303 b3705 CDS yidC NC_000913.3 3885076 3886722 D 60 KD inner-membrane protein; membrane protein insertase 3885076..3886722 Escherichia coli str. K-12 substr. MG1655 948214 b3706 CDS mnmE NC_000913.3 3886828 3888192 D tRNA U34 5-methylaminomethyl-2-thiouridine modification GTPase 3886828..3888192 Escherichia coli str. K-12 substr. MG1655 948222 b3707 CDS tnaC NC_000913.3 3888435 3888509 D tryptophanase leader peptide 3888435..3888509 Escherichia coli str. K-12 substr. MG1655 948223 b3708 CDS tnaA NC_000913.3 3888730 3890145 D tryptophanase; tryptophanase/L-cysteine desulfhydrase, PLP-dependent 3888730..3890145 Escherichia coli str. K-12 substr. MG1655 948221 b3709 CDS tnaB NC_000913.3 3890236 3891483 D low affinity tryptophan permease; tryptophan transporter of low affinity 3890236..3891483 Escherichia coli str. K-12 substr. MG1655 948220 b3710 CDS mdtL NC_000913.3 3891615 3892790 D putative transport protein; multidrug efflux system protein 3891615..3892790 Escherichia coli str. K-12 substr. MG1655 948219 b3711 CDS yidZ NC_000913.3 3892765 3893724 D putative transcriptional regulator LYSR-type; putative DNA-binding transcriptional regulator 3892765..3893724 Escherichia coli str. K-12 substr. MG1655 948227 b3712 CDS yieE NC_000913.3 3893881 3894630 D phosphopantetheinyl transferase superfamily protein 3893881..3894630 Escherichia coli str. K-12 substr. MG1655 948226 b3713 CDS chrR NC_000913.3 3894652 3895218 D chromate reductase, Class I, flavoprotein 3894652..3895218 Escherichia coli str. K-12 substr. MG1655 948225 b3714 CDS adeP NC_000913.3 3895272 3896609 R putative membrane / transport protein; adenine permease, high affinity; adenine:H+ symporter complement(3895272..3896609) Escherichia coli str. K-12 substr. MG1655 948224 b3715 CDS yieH NC_000913.3 3896774 3897439 D putative phosphatase; phosphoenolpyruvate and 6-phosphogluconate phosphatase 3896774..3897439 Escherichia coli str. K-12 substr. MG1655 948232 b3716 CDS cbrB NC_000913.3 3897506 3897973 D PRK09823 family inner membrane protein, creBC regulon 3897506..3897973 Escherichia coli str. K-12 substr. MG1655 948231 b3717 CDS cbrC NC_000913.3 3898022 3898609 D UPF0167 family protein 3898022..3898609 Escherichia coli str. K-12 substr. MG1655 948230 b3718 CDS yieK NC_000913.3 3898671 3899393 R pyrimidine-specific nucleoside hydrolase; putative 6-phosphogluconolactonase complement(3898671..3899393) Escherichia coli str. K-12 substr. MG1655 948229 b3719 CDS yieL NC_000913.3 3899408 3900577 R putative xylanase complement(3899408..3900577) Escherichia coli str. K-12 substr. MG1655 948272 b3720 CDS bglH NC_000913.3 3900604 3902220 R putative receptor protein; carbohydrate-specific outer membrane porin, cryptic complement(3900604..3902220) Escherichia coli str. K-12 substr. MG1655 948228 b3721 CDS bglB NC_000913.3 3902289 3903701 R phospho-beta-glucosidase B; cryptic; cryptic phospho-beta-glucosidase B complement(3902289..3903701) Escherichia coli str. K-12 substr. MG1655 948234 b3722 CDS bglF NC_000913.3 3903720 3905597 R PTS system beta-glucosides, enzyme II, cryptic; fused beta-glucoside-specific PTS enzymes: IIA component/IIB component/IIC component complement(3903720..3905597) Escherichia coli str. K-12 substr. MG1655 948236 b3723 CDS bglG NC_000913.3 3905731 3906567 R positive regulation of bgl operon; transcriptional antiterminator of the bgl operon complement(3905731..3906567) Escherichia coli str. K-12 substr. MG1655 948235 b3724 CDS phoU NC_000913.3 3906853 3907578 R negative regulator for pho regulon and putative enzyme in phosphate metabolism; negative regulator of PhoR/PhoB two-component regulator complement(3906853..3907578) Escherichia coli str. K-12 substr. MG1655 948233 b3725 CDS pstB NC_000913.3 3907593 3908366 R ATP-binding component of high-affinity phosphate-specific transport system; ATP-binding component of ABC superfamily; phosphate ABC transporter ATPase complement(3907593..3908366) Escherichia coli str. K-12 substr. MG1655 948240 b3726 CDS pstA NC_000913.3 3908549 3909439 R high-affinity phosphate-specific transport system; membrane component of ABC superfamily; phosphate ABC transporter permease complement(3908549..3909439) Escherichia coli str. K-12 substr. MG1655 948239 b3727 CDS pstC NC_000913.3 3909439 3910398 R high-affinity phosphate-specific transport system, cytoplasmic membrane component; membrane component of ABC superfamily; phosphate ABC transporter permease complement(3909439..3910398) Escherichia coli str. K-12 substr. MG1655 948238 b3728 CDS pstS NC_000913.3 3910485 3911525 R high-affinity phosphate-specific transport system; periplasmic phosphate-binding protein; periplasmic-binding component of ABC superfamily; phosphate ABC transporter periplasmic binding protein complement(3910485..3911525) Escherichia coli str. K-12 substr. MG1655 948237 b3729 CDS glmS NC_000913.3 3911839 3913668 R L-glutamine:D-fructose-6-phosphate aminotransferase complement(3911839..3913668) Escherichia coli str. K-12 substr. MG1655 948241 b3730 CDS glmU NC_000913.3 3913830 3915200 R N-acetyl glucosamine-1-phosphate uridyltransferase; fused N-acetyl glucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyl transferase complement(3913830..3915200) Escherichia coli str. K-12 substr. MG1655 948246 b3731 CDS atpC NC_000913.3 3915553 3915972 R membrane-bound ATP synthase, F1 sector, epsilon-subunit; F1 sector of membrane-bound ATP synthase, epsilon subunit complement(3915553..3915972) Escherichia coli str. K-12 substr. MG1655 948245 b3732 CDS atpD NC_000913.3 3915993 3917375 R membrane-bound ATP synthase, F1 sector, beta-subunit; F1 sector of membrane-bound ATP synthase, beta subunit complement(3915993..3917375) Escherichia coli str. K-12 substr. MG1655 948244 b3733 CDS atpG NC_000913.3 3917402 3918265 R membrane-bound ATP synthase, F1 sector, gamma-subunit; F1 sector of membrane-bound ATP synthase, gamma subunit complement(3917402..3918265) Escherichia coli str. K-12 substr. MG1655 948243 b3734 CDS atpA NC_000913.3 3918316 3919857 R membrane-bound ATP synthase, F1 sector, alpha-subunit; F1 sector of membrane-bound ATP synthase, alpha subunit complement(3918316..3919857) Escherichia coli str. K-12 substr. MG1655 948242 b3735 CDS atpH NC_000913.3 3919870 3920403 R membrane-bound ATP synthase, F1 sector, delta-subunit; F1 sector of membrane-bound ATP synthase, delta subunit complement(3919870..3920403) Escherichia coli str. K-12 substr. MG1655 948254 b3736 CDS atpF NC_000913.3 3920418 3920888 R membrane-bound ATP synthase, F0 sector, subunit b; F0 sector of membrane-bound ATP synthase, subunit b complement(3920418..3920888) Escherichia coli str. K-12 substr. MG1655 948247 b3737 CDS atpE NC_000913.3 3920950 3921189 R membrane-bound ATP synthase, F0 sector, subunit c; F0 sector of membrane-bound ATP synthase, subunit c complement(3920950..3921189) Escherichia coli str. K-12 substr. MG1655 948253 b3738 CDS atpB NC_000913.3 3921236 3922051 R membrane-bound ATP synthase, F0 sector, subunit a; F0 sector of membrane-bound ATP synthase, subunit a complement(3921236..3922051) Escherichia coli str. K-12 substr. MG1655 948252 b3739 CDS atpI NC_000913.3 3922060 3922440 R membrane-bound ATP synthase, dispensable protein, affects expression of atpB; ATP synthase, membrane-bound accessory factor complement(3922060..3922440) Escherichia coli str. K-12 substr. MG1655 948251 b3740 CDS rsmG NC_000913.3 3923057 3923680 R glucose-inhibited division; chromosome replication?; 16S rRNA m(7)G527 methyltransferase, SAM-dependent; glucose-inhibited cell-division protein complement(3923057..3923680) Escherichia coli str. K-12 substr. MG1655 948250 b3741 CDS mnmG NC_000913.3 3923744 3925633 R glucose-inhibited division; chromosome replication?; 5-methylaminomethyl-2-thiouridine modification at tRNA U34 complement(3923744..3925633) Escherichia coli str. K-12 substr. MG1655 948248 b3742 CDS mioC NC_000913.3 3926012 3926455 R initiation of chromosome replication; FMN-binding protein MioC complement(3926012..3926455) Escherichia coli str. K-12 substr. MG1655 948249 b3743 CDS asnC NC_000913.3 3926545 3927003 R regulator for asnA, asnC and gidA; transcriptional activator of asnA; autorepressor complement(3926545..3927003) Escherichia coli str. K-12 substr. MG1655 948259 b3744 CDS asnA NC_000913.3 3927155 3928147 D asparagine synthetase A 3927155..3928147 Escherichia coli str. K-12 substr. MG1655 948258 b3745 CDS viaA NC_000913.3 3928152 3929603 R stimulator of RavA ATPase activity; von Willebrand factor domain protein complement(3928152..3929603) Escherichia coli str. K-12 substr. MG1655 948257 b3746 CDS ravA NC_000913.3 3929597 3931093 R putative 2-component regulator; hexameric AAA+ MoxR family ATPase, putative molecular chaperone complement(3929597..3931093) Escherichia coli str. K-12 substr. MG1655 948256 b3747 CDS kup NC_000913.3 3931316 3933184 D low affinity potassium transport system; potassium transporter 3931316..3933184 Escherichia coli str. K-12 substr. MG1655 948255 b3748 CDS rbsD NC_000913.3 3933351 3933770 D D-ribose high-affinity transport system; membrane-associated protein; D-ribose pyranase 3933351..3933770 Escherichia coli str. K-12 substr. MG1655 948267 b3749 CDS rbsA NC_000913.3 3933778 3935283 D ATP-binding component of D-ribose high-affinity transport system; D-ribose ABC transporter ATPase 3933778..3935283 Escherichia coli str. K-12 substr. MG1655 948264 b3750 CDS rbsC NC_000913.3 3935288 3936253 D D-ribose high-affinity transport system; membrane component of ABC superfamily; D-ribose ABC transporter permease 3935288..3936253 Escherichia coli str. K-12 substr. MG1655 948262 b3751 CDS rbsB NC_000913.3 3936278 3937168 D D-ribose periplasmic binding protein; periplasmic-binding compoent of ABC superfamily; D-ribose ABC transporter periplasmic binding protein; ribose chemotaxis receptor 3936278..3937168 Escherichia coli str. K-12 substr. MG1655 948261 b3752 CDS rbsK NC_000913.3 3937294 3938223 D ribokinase 3937294..3938223 Escherichia coli str. K-12 substr. MG1655 948260 b3753 CDS rbsR NC_000913.3 3938227 3939219 D regulator for rbs operon; transcriptional repressor of ribose metabolism 3938227..3939219 Escherichia coli str. K-12 substr. MG1655 948266 b3754 CDS hsrA NC_000913.3 3939185 3940612 R putative transport protein (MFS family); high copy suppressor of RspA: relieves RspA-mediated reduction of sigma(S) levels; overexpression also reduces MetE activity; effect proposed to be via an elevation in levels of homocysteine, causing a concomitant increase in homocysteine thiolactone; overexpression has no effect on resistance to a variety of toxic compounds; overexpression has no effect on resistance to a variety of toxic compounds; putative multidrug or homocysteine efflux system complement(3939185..3940612) Escherichia coli str. K-12 substr. MG1655 948265 b3755 CDS yieP NC_000913.3 3940635 3941327 R putative transcriptional regulator complement(3940635..3941327) Escherichia coli str. K-12 substr. MG1655 948263 b4480 CDS hdfR NC_000913.3 3947128 3947967 R transcriptional regulator of the flhDC operon; flhDC operon transcriptional repressor complement(3947128..3947967) Escherichia coli str. K-12 substr. MG1655 2847698 b3764 CDS yifE NC_000913.3 3948086 3948424 D UPF0438 family protein 3948086..3948424 Escherichia coli str. K-12 substr. MG1655 948274 b3765 CDS yifB NC_000913.3 3948449 3949969 R putative 2-component regulator; magnesium chelatase family protein and putative transcriptional regulator complement(3948449..3949969) Escherichia coli str. K-12 substr. MG1655 948282 b3766 CDS ilvL NC_000913.3 3950322 3950420 D ilvGEDA operon leader peptide; ilvG operon leader peptide 3950322..3950420 Escherichia coli str. K-12 substr. MG1655 948283 b4669 CDS ilvX NC_000913.3 3950507 3950557 D uncharacterized protein 3950507..3950557 Escherichia coli str. K-12 substr. MG1655 7751639 b4488 CDS ilvG NC_000913.3 3950560 3952204 D pseudogene, acetolactate synthase 2 large subunit, valine-insensitive; acetolactate synthase II, large subunit, cryptic, interrupted; <NA> join(3950560..3951543,3951542..3952204) Escherichia coli str. K-12 substr. MG1655 2847699 b3769 CDS ilvM NC_000913.3 3952201 3952464 D acetolactate synthase II, valine insensitive, small subunit; acetolactate synthase 2 small subunit 3952201..3952464 Escherichia coli str. K-12 substr. MG1655 948279 b3770 CDS ilvE NC_000913.3 3952484 3953413 D branched-chain amino acid aminotransferase 3952484..3953413 Escherichia coli str. K-12 substr. MG1655 948278 b3771 CDS ilvD NC_000913.3 3953478 3955328 D dihydroxyacid dehydratase 3953478..3955328 Escherichia coli str. K-12 substr. MG1655 948277 b3772 CDS ilvA NC_000913.3 3955331 3956875 D threonine deaminase (dehydratase); l-threonine dehydratase, biosynthetic; also known as threonine deaminase 3955331..3956875 Escherichia coli str. K-12 substr. MG1655 948287 b3773 CDS ilvY NC_000913.3 3956927 3957820 R positive regulator for ilvC; transcriptional activator of ilvC; autorepressor complement(3956927..3957820) Escherichia coli str. K-12 substr. MG1655 948284 b3774 CDS ilvC NC_000913.3 3957970 3959445 D ketol-acid reductoisomerase; ketol-acid reductoisomerase, NAD(P)-binding 3957970..3959445 Escherichia coli str. K-12 substr. MG1655 948286 b3775 CDS ppiC NC_000913.3 3959532 3959813 R peptidyl-prolyl cis-trans isomerase C (rotamase C) complement(3959532..3959813) Escherichia coli str. K-12 substr. MG1655 948285 b3777 CDS yifN NC_000913.3 3960012 3960460 R PemK toxin family pseudogene; <NA> complement(join(3960012..3960254,3960254..3960460)) Escherichia coli str. K-12 substr. MG1655 2847676 b3778 CDS rep NC_000913.3 3960677 3962698 D rep helicase, a single-stranded DNA dependent ATPase; DNA helicase and single-stranded DNA-dependent ATPase 3960677..3962698 Escherichia coli str. K-12 substr. MG1655 948292 b3779 CDS gpp NC_000913.3 3962745 3964229 R guanosine pentaphosphatase; exopolyphosphatase; guanosine pentaphosphatase/exopolyphosphatase complement(3962745..3964229) Escherichia coli str. K-12 substr. MG1655 948291 b3780 CDS rhlB NC_000913.3 3964365 3965630 R putative ATP-dependent RNA helicase; ATP-dependent RNA helicase complement(3964365..3965630) Escherichia coli str. K-12 substr. MG1655 948290 b3781 CDS trxA NC_000913.3 3965761 3966090 D thioredoxin 1 3965761..3966090 Escherichia coli str. K-12 substr. MG1655 948289 b3783 CDS rho NC_000913.3 3966417 3967676 D transcription termination factor Rho; polarity suppressor; transcription termination factor 3966417..3967676 Escherichia coli str. K-12 substr. MG1655 948297 b3784 CDS wecA NC_000913.3 3967916 3969019 D UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase 3967916..3969019 Escherichia coli str. K-12 substr. MG1655 948789 b3785 CDS wzzE NC_000913.3 3969031 3970077 D modulator of enterobacterial common antigen (ECA) polysaccharide chain length; Entobacterial Common Antigen (ECA) polysaccharide chain length modulation protein 3969031..3970077 Escherichia coli str. K-12 substr. MG1655 944815 b3786 CDS wecB NC_000913.3 3970133 3971263 D UDP-N-acetyl glucosamine-2-epimerase 3970133..3971263 Escherichia coli str. K-12 substr. MG1655 944789 b3787 CDS wecC NC_000913.3 3971260 3972522 D UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase; synthesis of enterobacterial common antigen (ECA); UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase 3971260..3972522 Escherichia coli str. K-12 substr. MG1655 948977 b3788 CDS rffG NC_000913.3 3972522 3973589 D dTDP-glucose 4,6-dehydratase 3972522..3973589 Escherichia coli str. K-12 substr. MG1655 948300 b3789 CDS rffH NC_000913.3 3973608 3974489 D glucose-1-phosphate thymidylyltransferase 3973608..3974489 Escherichia coli str. K-12 substr. MG1655 948299 b3790 CDS wecD NC_000913.3 3974467 3975141 D putative acyltransferase, lipopolysaccharide biosynthesis protein; TDP-fucosamine acetyltransferase 3974467..3975141 Escherichia coli str. K-12 substr. MG1655 948298 b3791 CDS wecE NC_000913.3 3975146 3976276 D TDP-4-oxo-6-deoxy-D-glucose transaminase 3975146..3976276 Escherichia coli str. K-12 substr. MG1655 948296 b3792 CDS wzxE NC_000913.3 3976278 3977528 D O-antigen translocase in LPS biosynthesis; O-antigen translocase 3976278..3977528 Escherichia coli str. K-12 substr. MG1655 948294 b4481 CDS wecF NC_000913.3 3977525 3978604 D TDP-Fuc4NAc:lipidII transferase; TDP-Fuc4NAc:lipidIIFuc4NAc transferase 3977525..3978604 Escherichia coli str. K-12 substr. MG1655 2847677 b3793 CDS wzyE NC_000913.3 3978601 3979953 D putative ECA polymerization protein; putative ECA polysaccharide chain elongation protein 3978601..3979953 Escherichia coli str. K-12 substr. MG1655 948293 b3794 CDS wecG NC_000913.3 3979956 3980696 D probable UDP-N-acetyl-D-mannosaminuronic acid transferase; synthesis of enterobacterial common antigen (ECA); UDP-N-acetyl-D-mannosaminuronic acid transferase 3979956..3980696 Escherichia coli str. K-12 substr. MG1655 948301 b3795 CDS yifK NC_000913.3 3980887 3982272 D putative amino acid/amine transport protein; putative APC family amino acid transporter 3980887..3982272 Escherichia coli str. K-12 substr. MG1655 945400 b3800 CDS aslB NC_000913.3 3982958 3984193 D putative arylsulfatase regulator; putative AslA-specific sulfatase-maturating enzyme 3982958..3984193 Escherichia coli str. K-12 substr. MG1655 949013 b3801 CDS aslA NC_000913.3 3984352 3986007 R arylsulfatase; putative Ser-type periplasmic non-aryl sulfatase complement(3984352..3986007) Escherichia coli str. K-12 substr. MG1655 949015 b3802 CDS hemY NC_000913.3 3986686 3987882 R a late step of protoheme IX synthesis; putative protoheme IX synthesis protein complement(3986686..3987882) Escherichia coli str. K-12 substr. MG1655 948311 b3803 CDS hemX NC_000913.3 3987885 3989066 R uroporphyrinogen III methylase; putative uroporphyrinogen III methyltransferase complement(3987885..3989066) Escherichia coli str. K-12 substr. MG1655 948446 b3804 CDS hemD NC_000913.3 3989088 3989828 R uroporphyrinogen III synthase complement(3989088..3989828) Escherichia coli str. K-12 substr. MG1655 948587 b3805 CDS hemC NC_000913.3 3989825 3990766 R porphobilinogen deaminase = hydroxymethylbilane synthase; hydroxymethylbilane synthase complement(3989825..3990766) Escherichia coli str. K-12 substr. MG1655 947759 b3806 CDS cyaA NC_000913.3 3991153 3993699 D adenylate cyclase 3991153..3993699 Escherichia coli str. K-12 substr. MG1655 947755 b3807 CDS cyaY NC_000913.3 3993739 3994059 R iron-binding frataxin homolog; cyaY is expressed; neither knock-out nor overexpression of cyaY in Escherichia coli affects cellular iron content or sensitivity to oxidants; possibly involved in maintaining the intracellular iron pool in a soluble, non-toxic and bio-available form for biosynthetic pathways, while preventing the participation of iron in oxidative damage; iron-dependent inhibitor of iron-sulfur cluster formation; frataxin; iron-binding and oxidizing protein complement(3993739..3994059) Escherichia coli str. K-12 substr. MG1655 947754 b4558 CDS yifL NC_000913.3 3994522 3994725 D putative lipoprotein 3994522..3994725 Escherichia coli str. K-12 substr. MG1655 1450304 b3809 CDS dapF NC_000913.3 3994762 3995586 D diaminopimelate epimerase 3994762..3995586 Escherichia coli str. K-12 substr. MG1655 948364 b3810 CDS yigA NC_000913.3 3995583 3996290 D DUF484 family protein 3995583..3996290 Escherichia coli str. K-12 substr. MG1655 948359 b3811 CDS xerC NC_000913.3 3996287 3997183 D site-specific recombinase, acts on cer sequence of ColE1, effects chromosome segregation at cell division; site-specific tyrosine recombinase 3996287..3997183 Escherichia coli str. K-12 substr. MG1655 948355 b3812 CDS yigB NC_000913.3 3997183 3997899 D putative phosphatase; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase; pyrimidine phosphatase; riboflavin synthesis 3997183..3997899 Escherichia coli str. K-12 substr. MG1655 948357 b3813 CDS uvrD NC_000913.3 3997983 4000145 D DNA-dependent ATPase I and helicase II 3997983..4000145 Escherichia coli str. K-12 substr. MG1655 948347 b4482 CDS yigE NC_000913.3 4000292 4001056 R DUF2233 family protein complement(4000292..4001056) Escherichia coli str. K-12 substr. MG1655 2847679 b3816 CDS corA NC_000913.3 4001426 4002376 D Mg2+ transport, system I; magnesium/nickel/cobalt transporter 4001426..4002376 Escherichia coli str. K-12 substr. MG1655 948351 b3817 CDS yigF NC_000913.3 4002419 4002799 R DUF2628 family putative inner membrane protein complement(4002419..4002799) Escherichia coli str. K-12 substr. MG1655 948340 b3818 CDS yigG NC_000913.3 4002813 4003193 R PRK11371 family inner membrane protein complement(4002813..4003193) Escherichia coli str. K-12 substr. MG1655 948344 b3819 CDS rarD NC_000913.3 4003288 4004178 R putative chloramphenical resistance permease complement(4003288..4004178) Escherichia coli str. K-12 substr. MG1655 948330 b3820 CDS yigI NC_000913.3 4004230 4004697 R 4HBT thioesterase family protein complement(4004230..4004697) Escherichia coli str. K-12 substr. MG1655 948338 b3821 CDS pldA NC_000913.3 4004862 4005731 D outer membrane phospholipase A 4004862..4005731 Escherichia coli str. K-12 substr. MG1655 948307 b3822 CDS recQ NC_000913.3 4005864 4007693 D ATP-dependent DNA helicase 4005864..4007693 Escherichia coli str. K-12 substr. MG1655 948318 b3823 CDS rhtC NC_000913.3 4007757 4008377 D amino acid exporter (threonine); threonine efflux protein (RhtB family); threonine efflux pump 4007757..4008377 Escherichia coli str. K-12 substr. MG1655 948317 b3824 CDS rhtB NC_000913.3 4008439 4009059 R homoserine, homoserine lactone and S-methyl-methionine efflux pump complement(4008439..4009059) Escherichia coli str. K-12 substr. MG1655 948316 b3825 CDS pldB NC_000913.3 4009170 4010192 D lysophospholipase L2 4009170..4010192 Escherichia coli str. K-12 substr. MG1655 948314 b3826 CDS yigL NC_000913.3 4010200 4011000 D conserved protein, phosphatase-like domain; pyridoxal phosphate phosphatase 4010200..4011000 Escherichia coli str. K-12 substr. MG1655 2847768 b3827 CDS yigM NC_000913.3 4011076 4011975 D putative inner membrane EamA-like transporter 4011076..4011975 Escherichia coli str. K-12 substr. MG1655 948309 b3828 CDS metR NC_000913.3 4011863 4012816 R regulator for metE and metH; methionine biosynthesis regulon transcriptional regulator complement(4011863..4012816) Escherichia coli str. K-12 substr. MG1655 948310 b3829 CDS metE NC_000913.3 4013053 4015314 D tetrahydropteroyltriglutamate methyltransferase; 5-methyltetrahydropteroyltriglutamate- homocysteine S-methyltransferase 4013053..4015314 Escherichia coli str. K-12 substr. MG1655 948323 b3830 CDS ysgA NC_000913.3 4015354 4016169 R putative enzyme; putative carboxymethylenebutenolidase complement(4015354..4016169) Escherichia coli str. K-12 substr. MG1655 948320 b3831 CDS udp NC_000913.3 4016431 4017192 D uridine phosphorylase 4016431..4017192 Escherichia coli str. K-12 substr. MG1655 948987 b3832 CDS rmuC NC_000913.3 4017333 4018760 D putative alpha helix chain; DNA recombination protein 4017333..4018760 Escherichia coli str. K-12 substr. MG1655 948966 b3833 CDS ubiE NC_000913.3 4018855 4019610 D 2-octaprenyl-6-methoxy-1,4-benzoquinone --> 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinone; bifunctional 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase/ S-adenosylmethionine:2-DMK methyltransferase 4018855..4019610 Escherichia coli str. K-12 substr. MG1655 948926 b3834 CDS ubiJ NC_000913.3 4019624 4020229 D aerobic ubiquinone synthesis protein, SCP2 family protein 4019624..4020229 Escherichia coli str. K-12 substr. MG1655 948915 b3835 CDS ubiB NC_000913.3 4020226 4021866 D regulator of octaprenylphenol hydroxylation, ubiquinone synthesis; regulator of 2'-N-acetyltransferase; putative ABC1 family protein kinase 4020226..4021866 Escherichia coli str. K-12 substr. MG1655 948322 b3836 CDS tatA NC_000913.3 4021945 4022214 D TatABCE protein translocation system subunit 4021945..4022214 Escherichia coli str. K-12 substr. MG1655 948321 b3838 CDS tatB NC_000913.3 4022218 4022733 D TatABCE protein translocation system subunit 4022218..4022733 Escherichia coli str. K-12 substr. MG1655 948319 b3839 CDS tatC NC_000913.3 4022736 4023512 D TatABCE protein translocation system subunit 4022736..4023512 Escherichia coli str. K-12 substr. MG1655 948328 b4483 CDS tatD NC_000913.3 4023554 4024336 D cytoplasmic Dnase; quality control of Tat-exported FeS proteins; Mg-dependent cytoplasmic DNase 4023554..4024336 Escherichia coli str. K-12 substr. MG1655 2847752 b3842 CDS rfaH NC_000913.3 4024333 4024821 R transcriptional activator affecting biosynthesis of lipopolysaccharide core, F pilin, and haemolysin; transcription antitermination protein complement(4024333..4024821) Escherichia coli str. K-12 substr. MG1655 948327 b3843 CDS ubiD NC_000913.3 4024988 4026481 D 3-octaprenyl-4-hydroxybenzoate decarboxylase 4024988..4026481 Escherichia coli str. K-12 substr. MG1655 948326 b3844 CDS fre NC_000913.3 4026527 4027228 D ferrisiderophore reductase; flavin reductase (NADPH:flavin oxidoreductase); NAD(P)H-flavin reductase 4026527..4027228 Escherichia coli str. K-12 substr. MG1655 948325 b3845 CDS fadA NC_000913.3 4027609 4028772 R thiolase I; 3-ketoacyl-CoA thiolase; acetyl-CoA transferase; 3-ketoacyl-CoA thiolase (thiolase I) complement(4027609..4028772) Escherichia coli str. K-12 substr. MG1655 948324 b3846 CDS fadB NC_000913.3 4028782 4030971 R 4-enzyme protein: 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase; delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase; enoyl-CoA hydratase; fused 3-hydroxybutyryl-CoA epimerase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase complement(4028782..4030971) Escherichia coli str. K-12 substr. MG1655 948336 b3847 CDS pepQ NC_000913.3 4031161 4032492 D proline dipeptidase 4031161..4032492 Escherichia coli str. K-12 substr. MG1655 948335 b3848 CDS yigZ NC_000913.3 4032492 4033106 D UPF0029 family protein 4032492..4033106 Escherichia coli str. K-12 substr. MG1655 948334 b3849 CDS trkH NC_000913.3 4033145 4034596 D potassium uptake, requires TrkE; potassium transporter 4033145..4034596 Escherichia coli str. K-12 substr. MG1655 948333 b3850 CDS hemG NC_000913.3 4034608 4035153 D protoporphyrin oxidase; protoporphyrin oxidase, flavoprotein 4034608..4035153 Escherichia coli str. K-12 substr. MG1655 948331 b3856 CDS mobB NC_000913.3 4040906 4041433 R molybdopterin-guanine dinucleotide biosynthesis protein B complement(4040906..4041433) Escherichia coli str. K-12 substr. MG1655 948343 b3857 CDS mobA NC_000913.3 4041415 4041999 R molybdopterin ---> molybdopterin-guanine dinucleotide, protein Ar; molybdopterin-guanine dinucleotide synthase complement(4041415..4041999) Escherichia coli str. K-12 substr. MG1655 948349 b3858 CDS yihD NC_000913.3 4042069 4042338 D DUF1040 protein YihD 4042069..4042338 Escherichia coli str. K-12 substr. MG1655 948348 b3859 CDS srkA NC_000913.3 4042415 4043401 D Cpx stress response Thr/Ser protein kinase; MazF antagonist protein 4042415..4043401 Escherichia coli str. K-12 substr. MG1655 948346 b3860 CDS dsbA NC_000913.3 4043418 4044044 D protein disulfide isomerase I, essential for cytochrome c synthesis and formate-dependent reduction; periplasmic protein disulfide isomerase I 4043418..4044044 Escherichia coli str. K-12 substr. MG1655 948353 b3861 CDS yihF NC_000913.3 4044199 4045629 D putative GTP-binding protein; DUF945 family protein 4044199..4045629 Escherichia coli str. K-12 substr. MG1655 948352 b3862 CDS yihG NC_000913.3 4045670 4046602 R putative endonuclease; inner membrane protein, inner membrane acyltransferase complement(4045670..4046602) Escherichia coli str. K-12 substr. MG1655 948350 b3863 CDS polA NC_000913.3 4046966 4049752 D DNA polymerase I, 3' --> 5' polymerase, 5' --> 3' and 3' --> 5' exonuclease; 5' to 3' DNA polymerase and 3' to 5'/5' to 3' exonuclease 4046966..4049752 Escherichia coli str. K-12 substr. MG1655 948356 b3865 CDS yihA NC_000913.3 4050133 4050765 R GTPase essential for cell cycle; cell division GTP-binding protein complement(4050133..4050765) Escherichia coli str. K-12 substr. MG1655 948358 b3866 CDS yihI NC_000913.3 4051347 4051856 D activator of Der GTPase 4051347..4051856 Escherichia coli str. K-12 substr. MG1655 948363 b3867 CDS hemN NC_000913.3 4052045 4053418 D O2-independent coproporphyrinogen III oxidase; coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen-independent 4052045..4053418 Escherichia coli str. K-12 substr. MG1655 948362 b4686 CDS yshB NC_000913.3 4053647 4053757 R uncharacterized protein complement(4053647..4053757) Escherichia coli str. K-12 substr. MG1655 7751621 b3868 CDS glnG NC_000913.3 4053869 4055278 R response regulator for gln (sensor glnL) (nitrogen regulator I, NRI); fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein complement(4053869..4055278) Escherichia coli str. K-12 substr. MG1655 948361 b3869 CDS glnL NC_000913.3 4055290 4056339 R histidine protein kinase sensor for GlnG regulator (nitrogen regulator II, NRII); sensory histidine kinase in two-component regulatory system with GlnG complement(4055290..4056339) Escherichia coli str. K-12 substr. MG1655 948360 b3870 CDS glnA NC_000913.3 4056625 4058034 R glutamine synthetase complement(4056625..4058034) Escherichia coli str. K-12 substr. MG1655 948370 b3871 CDS typA NC_000913.3 4058407 4060230 D GTP-binding protein 4058407..4060230 Escherichia coli str. K-12 substr. MG1655 948369 b3872 CDS yihL NC_000913.3 4060447 4061157 D putative transcriptional regulator; putative DNA-binding transcriptional regulator 4060447..4061157 Escherichia coli str. K-12 substr. MG1655 948368 b3873 CDS yihM NC_000913.3 4061165 4062145 D putative sugar phosphate isomerase 4061165..4062145 Escherichia coli str. K-12 substr. MG1655 948367 b3874 CDS yihN NC_000913.3 4062247 4063512 D putative resistance protein (transport); MFS transporter family protein 4062247..4063512 Escherichia coli str. K-12 substr. MG1655 948365 b3875 CDS ompL NC_000913.3 4063603 4064295 R outer membrane porin L; putative sulpholipid porin complement(4063603..4064295) Escherichia coli str. K-12 substr. MG1655 948366 b3876 CDS yihO NC_000913.3 4064363 4065766 R putative permease; putative sulphoquinovose importer complement(4064363..4065766) Escherichia coli str. K-12 substr. MG1655 948377 b3877 CDS yihP NC_000913.3 4065809 4067194 R putative permease; putative 2,3-dihydroxypropane-1-sulphonate exporter, membrane protein complement(4065809..4067194) Escherichia coli str. K-12 substr. MG1655 948371 b3878 CDS yihQ NC_000913.3 4067240 4069276 R putative glycosidase; putative sulpholipid alpha-glucosidase; alpha-glucosyl fluoride glucosidase complement(4067240..4069276) Escherichia coli str. K-12 substr. MG1655 948376 b3879 CDS yihR NC_000913.3 4069475 4070401 R putative aldose-1-epimerase; putative sulphoquinovose mutarotase complement(4069475..4070401) Escherichia coli str. K-12 substr. MG1655 948375 b3880 CDS yihS NC_000913.3 4070515 4071756 R sulphoquinovose isomerase complement(4070515..4071756) Escherichia coli str. K-12 substr. MG1655 948374 b3881 CDS yihT NC_000913.3 4071773 4072651 R putative aldolase; 6-deoxy-6-sulphofructose-1-phosphate aldolase complement(4071773..4072651) Escherichia coli str. K-12 substr. MG1655 948373 b3882 CDS yihU NC_000913.3 4072675 4073571 R putative dehydrogenase; 3-sulpholactaldehyde (SLA) reductase, NADH-dependent; gamma-hydroxybutyrate dehydrogenase, NADH-dependent complement(4072675..4073571) Escherichia coli str. K-12 substr. MG1655 948372 b3883 CDS yihV NC_000913.3 4073739 4074635 D putative kinase; 6-deoxy-6-sulphofructose kinase 4073739..4074635 Escherichia coli str. K-12 substr. MG1655 948382 b3884 CDS yihW NC_000913.3 4074669 4075454 D putative DEOR-type transcriptional regulator; putative transcriptional regulator for sulphoquinovose utilization 4074669..4075454 Escherichia coli str. K-12 substr. MG1655 948381 b3885 CDS yihX NC_000913.3 4075553 4076152 D putative phosphatase; alpha-D-glucose-1-phosphate phosphatase, anomer-specific 4075553..4076152 Escherichia coli str. K-12 substr. MG1655 948380 b3886 CDS yihY NC_000913.3 4076146 4077018 D tRNA processing exoribonuclease BN; BrkB family putative transporter, inner membrane protein 4076146..4077018 Escherichia coli str. K-12 substr. MG1655 948379 b3887 CDS dtd NC_000913.3 4077015 4077452 D D-tyr-tRNA(Tyr) deacylase 4077015..4077452 Escherichia coli str. K-12 substr. MG1655 948378 b3888 CDS yiiD NC_000913.3 4077449 4078438 D putative acetyltransferase; GNAT family putative N-acetyltransferase 4077449..4078438 Escherichia coli str. K-12 substr. MG1655 948387 b3889 CDS yiiE NC_000913.3 4079297 4079509 D CopG family putative transcriptional regulator 4079297..4079509 Escherichia coli str. K-12 substr. MG1655 948386 b3890 CDS yiiF NC_000913.3 4079751 4079969 D putative thymol sensitivity protein, CopG family putative transcriptional regulator 4079751..4079969 Escherichia coli str. K-12 substr. MG1655 948385 b3891 CDS fdhE NC_000913.3 4080299 4081228 R affects formate dehydrogenase-N; formate dehydrogenase formation protein complement(4080299..4081228) Escherichia coli str. K-12 substr. MG1655 948384 b3892 CDS fdoI NC_000913.3 4081225 4081860 R formate dehydrogenase, cytochrome B556 (FDO) subunit; formate dehydrogenase-O, cytochrome b556 subunit complement(4081225..4081860) Escherichia coli str. K-12 substr. MG1655 948383 b3893 CDS fdoH NC_000913.3 4081857 4082759 R formate dehydrogenase-O, iron-sulfur subunit; formate dehydrogenase-O, Fe-S subunit complement(4081857..4082759) Escherichia coli str. K-12 substr. MG1655 948395 b3894 CDS fdoG NC_000913.3 4082772 4085822 R formate dehydrogenase-O, major subunit; formate dehydrogenase-O, large subunit complement(4082772..4085822) Escherichia coli str. K-12 substr. MG1655 948394 b3895 CDS fdhD NC_000913.3 4086016 4086849 D affects formate dehydrogenase-N; formate dehydrogenase formation protein 4086016..4086849 Escherichia coli str. K-12 substr. MG1655 948393 b3896 CDS yiiG NC_000913.3 4087002 4088057 D DUF3829 family lipoprotein 4087002..4088057 Escherichia coli str. K-12 substr. MG1655 948392 b3897 CDS frvR NC_000913.3 4088107 4089855 R putative frv operon regulatory protein; putative frv operon regulator; contains a PTS EIIA domain complement(4088107..4089855) Escherichia coli str. K-12 substr. MG1655 948389 b3898 CDS frvX NC_000913.3 4089855 4090925 R frv operon protein; putative peptidase complement(4089855..4090925) Escherichia coli str. K-12 substr. MG1655 948388 b3899 CDS frvB NC_000913.3 4090915 4092366 R PTS system, fructose-like enzyme IIBC component; putative PTS enzyme, IIB component/IIC component complement(4090915..4092366) Escherichia coli str. K-12 substr. MG1655 948390 b3900 CDS frvA NC_000913.3 4092377 4092823 R PTS system, fructose-specific IIA component; putative enzyme IIA component of PTS complement(4092377..4092823) Escherichia coli str. K-12 substr. MG1655 948391 b3901 CDS rhaM NC_000913.3 4093124 4093438 R L-rhamnose mutarotase complement(4093124..4093438) Escherichia coli str. K-12 substr. MG1655 948402 b3902 CDS rhaD NC_000913.3 4093448 4094272 R rhamnulose-phosphate aldolase; rhamnulose-1-phosphate aldolase complement(4093448..4094272) Escherichia coli str. K-12 substr. MG1655 948401 b3903 CDS rhaA NC_000913.3 4094723 4095982 R L-rhamnose isomerase complement(4094723..4095982) Escherichia coli str. K-12 substr. MG1655 948400 b3904 CDS rhaB NC_000913.3 4095979 4097448 R rhamnulokinase complement(4095979..4097448) Escherichia coli str. K-12 substr. MG1655 948399 b3905 CDS rhaS NC_000913.3 4097736 4098572 D positive regulator for rhaBAD operon; transcriptional activator of rhaBAD and rhaT 4097736..4098572 Escherichia coli str. K-12 substr. MG1655 948397 b3906 CDS rhaR NC_000913.3 4098646 4099494 D positive regulator for rhaRS operon; transcriptional activator of rhaSR 4098646..4099494 Escherichia coli str. K-12 substr. MG1655 948396 b3907 CDS rhaT NC_000913.3 4099491 4100525 R rhamnose transport; L-rhamnose:proton symporter complement(4099491..4100525) Escherichia coli str. K-12 substr. MG1655 948398 b3908 CDS sodA NC_000913.3 4100810 4101430 D superoxide dismutase, manganese; superoxide dismutase, Mn 4100810..4101430 Escherichia coli str. K-12 substr. MG1655 948403 b3909 CDS kdgT NC_000913.3 4101690 4102673 D 2-keto-3-deoxy-D-gluconate transport system; 2-keto-3-deoxy-D-gluconate transporter 4101690..4102673 Escherichia coli str. K-12 substr. MG1655 948407 b3910 CDS yiiM NC_000913.3 4102822 4103496 D 6-N-hydroxylaminopurine resistance protein 4102822..4103496 Escherichia coli str. K-12 substr. MG1655 948406 b3911 CDS cpxA NC_000913.3 4103602 4104975 R probable sensor protein (histidine protein kinase), acting on arcA; sensory histidine kinase in two-component regulatory system with CpxR complement(4103602..4104975) Escherichia coli str. K-12 substr. MG1655 948405 b3912 CDS cpxR NC_000913.3 4104972 4105670 R transcriptional regulator in 2-component system; response regulator in two-component regulatory system with CpxA complement(4104972..4105670) Escherichia coli str. K-12 substr. MG1655 948404 b4484 CDS cpxP NC_000913.3 4105820 4106320 D periplasmic repressor of cpx regulon by interaction with CpxA; inhibitor of the cpx response; periplasmic adaptor protein 4105820..4106320 Escherichia coli str. K-12 substr. MG1655 2847688 b3915 CDS fieF NC_000913.3 4106469 4107371 D putative transport system permease protein; ferrous iron and zinc transporter 4106469..4107371 Escherichia coli str. K-12 substr. MG1655 948413 b3916 CDS pfkA NC_000913.3 4107552 4108514 D 6-phosphofructokinase I 4107552..4108514 Escherichia coli str. K-12 substr. MG1655 948412 b3917 CDS sbp NC_000913.3 4108834 4109823 D periplasmic sulfate-binding protein; periplasmic-binding component of ABC superfamily; sulfate transporter subunit 4108834..4109823 Escherichia coli str. K-12 substr. MG1655 948411 b3918 CDS cdh NC_000913.3 4109930 4110685 D CDP-diacylglycerol phosphotidylhydrolase 4109930..4110685 Escherichia coli str. K-12 substr. MG1655 948410 b3919 CDS tpiA NC_000913.3 4110740 4111507 R triosephosphate isomerase complement(4110740..4111507) Escherichia coli str. K-12 substr. MG1655 948409 b3920 CDS yiiQ NC_000913.3 4111615 4112214 R DUF1454 family putative periplasmic protein complement(4111615..4112214) Escherichia coli str. K-12 substr. MG1655 948408 b3921 CDS yiiR NC_000913.3 4112315 4112755 D DUF805 family putative inner membrane protein 4112315..4112755 Escherichia coli str. K-12 substr. MG1655 948417 b3922 CDS yiiS NC_000913.3 4112967 4113266 D UPF0381 family protein 4112967..4113266 Escherichia coli str. K-12 substr. MG1655 948416 b3923 CDS uspD NC_000913.3 4113293 4113721 D putative regulator; stress-induced protein 4113293..4113721 Escherichia coli str. K-12 substr. MG1655 948415 b3924 CDS fpr NC_000913.3 4113726 4114472 R ferredoxin-NADP reductase; flavodoxin reductase complement(4113726..4114472) Escherichia coli str. K-12 substr. MG1655 948414 b3925 CDS glpX NC_000913.3 4114569 4115579 R not required for growth on glycerol; fructose 1,6-bisphosphatase II complement(4114569..4115579) Escherichia coli str. K-12 substr. MG1655 948424 b3926 CDS glpK NC_000913.3 4115714 4117222 R glycerol kinase complement(4115714..4117222) Escherichia coli str. K-12 substr. MG1655 948423 b3927 CDS glpF NC_000913.3 4117245 4118090 R facilitated diffusion of glycerol; glycerol facilitator complement(4117245..4118090) Escherichia coli str. K-12 substr. MG1655 948422 b3928 CDS zapB NC_000913.3 4118515 4118760 D FtsZ stabilizer, septal ring assembly factor, cell division stimulator 4118515..4118760 Escherichia coli str. K-12 substr. MG1655 948420 b3929 CDS rraA NC_000913.3 4118845 4119330 R ribonuclease E (RNase E) inhibitor protein complement(4118845..4119330) Escherichia coli str. K-12 substr. MG1655 948419 b3930 CDS menA NC_000913.3 4119423 4120349 R 1,4-dihydroxy-2-naphthoate --> dimethylmenaquinone; 1,4-dihydroxy-2-naphthoate octaprenyltransferase complement(4119423..4120349) Escherichia coli str. K-12 substr. MG1655 948418 b3931 CDS hslU NC_000913.3 4120416 4121747 R heat shock protein hslVU, ATPase subunit, homologous to chaperones; molecular chaperone and ATPase component of HslUV protease complement(4120416..4121747) Escherichia coli str. K-12 substr. MG1655 948430 b3932 CDS hslV NC_000913.3 4121757 4122287 R heat shock protein hslVU, proteasome-related peptidase subunit; peptidase component of the HslUV protease complement(4121757..4122287) Escherichia coli str. K-12 substr. MG1655 948429 b3933 CDS ftsN NC_000913.3 4122380 4123339 R essential cell division protein complement(4122380..4123339) Escherichia coli str. K-12 substr. MG1655 948428 b3934 CDS cytR NC_000913.3 4123431 4124456 R regulator for deo operon, udp, cdd, tsx, nupC, and nupG; Anti-activator for CytR-CRP nucleoside utilization regulon complement(4123431..4124456) Escherichia coli str. K-12 substr. MG1655 948427 b3935 CDS priA NC_000913.3 4124612 4126810 R primosomal protein N'(= factor Y)(putative helicase); Primosome factor n' (replication factor Y) complement(4124612..4126810) Escherichia coli str. K-12 substr. MG1655 948426 b3936 CDS rpmE NC_000913.3 4127013 4127225 D 50S ribosomal subunit protein L31 4127013..4127225 Escherichia coli str. K-12 substr. MG1655 948425 b3937 CDS yiiX NC_000913.3 4127286 4127894 R putative lipid binding hydrolase, DUF830 family protein complement(4127286..4127894) Escherichia coli str. K-12 substr. MG1655 948436 b3938 CDS metJ NC_000913.3 4128078 4128395 R repressor of all met genes but metF; transcriptional repressor, S-adenosylmethionine-binding complement(4128078..4128395) Escherichia coli str. K-12 substr. MG1655 948435 b3939 CDS metB NC_000913.3 4128672 4129832 D cystathionine gamma-synthase; cystathionine gamma-synthase, PLP-dependent 4128672..4129832 Escherichia coli str. K-12 substr. MG1655 948434 b3940 CDS metL NC_000913.3 4129835 4132267 D aspartokinase II and homoserine dehydrogenase II; Bifunctional aspartokinase/homoserine dehydrogenase 2 4129835..4132267 Escherichia coli str. K-12 substr. MG1655 948433 b3941 CDS metF NC_000913.3 4132616 4133506 D 5,10-methylenetetrahydrofolate reductase 4132616..4133506 Escherichia coli str. K-12 substr. MG1655 948432 b3942 CDS katG NC_000913.3 4133835 4136015 D catalase; hydroperoxidase HPI(I); catalase-peroxidase HPI, heme b-containing 4133835..4136015 Escherichia coli str. K-12 substr. MG1655 948431 b3943 CDS yijE NC_000913.3 4136108 4137013 D EamA-like transporter family protein 4136108..4137013 Escherichia coli str. K-12 substr. MG1655 948445 b3944 CDS yijF NC_000913.3 4137040 4137657 R DUF1287 family protein complement(4137040..4137657) Escherichia coli str. K-12 substr. MG1655 948441 b3945 CDS gldA NC_000913.3 4137932 4139035 R glycerol dehydrogenase, (NAD); glycerol dehydrogenase, NAD+ dependent; 1,2-propanediol:NAD+ oxidoreductase complement(4137932..4139035) Escherichia coli str. K-12 substr. MG1655 948440 b3946 CDS fsaB NC_000913.3 4139046 4139708 R fructose-6-phosphate aldolase 2 complement(4139046..4139708) Escherichia coli str. K-12 substr. MG1655 948439 b3947 CDS frwA NC_000913.3 4139720 4142221 R PEP-protein phosphotransferase system enzyme I; putative PTS enzyme: Hpr, enzyme I and II components complement(4139720..4142221) Escherichia coli str. K-12 substr. MG1655 948437 b3949 CDS frwC NC_000913.3 4142530 4143609 D PTS system, fructose-like enzyme II component; putative enzyme IIC component of PTS 4142530..4143609 Escherichia coli str. K-12 substr. MG1655 948448 b3950 CDS frwB NC_000913.3 4143624 4143944 D PTS system fructose-like IIB component 1; putative enzyme IIB component of PTS 4143624..4143944 Escherichia coli str. K-12 substr. MG1655 948447 b3951 CDS pflD NC_000913.3 4143995 4146292 D formate acetyltransferase 2; putative glycine radical domain-containing pyruvate formate-lyase 4143995..4146292 Escherichia coli str. K-12 substr. MG1655 948454 b3952 CDS pflC NC_000913.3 4146258 4147136 D probable pyruvate formate lyase activating enzyme 2; putative [formate-C-acetyltransferase 2]-activating enzyme; pyruvate formate-lyase 1-activating enzyme 4146258..4147136 Escherichia coli str. K-12 substr. MG1655 948453 b3953 CDS frwD NC_000913.3 4147138 4147479 D PTS system fructose-like IIB component 2; putative enzyme IIB component of PTS 4147138..4147479 Escherichia coli str. K-12 substr. MG1655 948452 b3954 CDS yijO NC_000913.3 4147466 4148317 R putative ARAC-type regulatory protein; AraC family putative transcriptional activator complement(4147466..4148317) Escherichia coli str. K-12 substr. MG1655 948451 b3955 CDS eptC NC_000913.3 4148532 4150265 R LPS heptose I phosphoethanolamine transferase complement(4148532..4150265) Escherichia coli str. K-12 substr. MG1655 948458 b3956 CDS ppc NC_000913.3 4150447 4153098 R phosphoenolpyruvate carboxylase complement(4150447..4153098) Escherichia coli str. K-12 substr. MG1655 948457 b3957 CDS argE NC_000913.3 4153696 4154847 R acetylornithine deacetylase complement(4153696..4154847) Escherichia coli str. K-12 substr. MG1655 948456 b3958 CDS argC NC_000913.3 4155001 4156005 D N-acetyl-gamma-glutamylphosphate reductase; N-acetyl-gamma-glutamylphosphate reductase, NAD(P)-binding 4155001..4156005 Escherichia coli str. K-12 substr. MG1655 948455 b3959 CDS argB NC_000913.3 4156013 4156789 D acetylglutamate kinase 4156013..4156789 Escherichia coli str. K-12 substr. MG1655 948464 b3960 CDS argH NC_000913.3 4156850 4158223 D argininosuccinate lyase 4156850..4158223 Escherichia coli str. K-12 substr. MG1655 948463 b3961 CDS oxyR NC_000913.3 4158490 4159407 D activator, hydrogen peroxide-inducible genes; oxidative and nitrosative stress transcriptional regulator 4158490..4159407 Escherichia coli str. K-12 substr. MG1655 948462 b3962 CDS sthA NC_000913.3 4159390 4160790 R pyridine nucleotide transhydrogenase, soluble complement(4159390..4160790) Escherichia coli str. K-12 substr. MG1655 948461 b3963 CDS fabR NC_000913.3 4161124 4161771 D transcriptional repressor of fabA and fabB 4161124..4161771 Escherichia coli str. K-12 substr. MG1655 948460 b3964 CDS yijD NC_000913.3 4161771 4162130 D DUF1422 family inner membrane protein 4161771..4162130 Escherichia coli str. K-12 substr. MG1655 948459 b3965 CDS trmA NC_000913.3 4162170 4163270 R tRNA m(5)U54 methyltransferase, SAM-dependent; tmRNA m(5)U341 methyltransferase complement(4162170..4163270) Escherichia coli str. K-12 substr. MG1655 947143 b3966 CDS btuB NC_000913.3 4163639 4165483 D outer membrane receptor for transport of vitamin B12, E colicins, and bacteriophage BF23; vitamin B12/cobalamin outer membrane transporter 4163639..4165483 Escherichia coli str. K-12 substr. MG1655 948468 b3967 CDS murI NC_000913.3 4165428 4166285 D glutamate racemase, required for biosynthesis of D-glutamate and peptidoglycan; glutamate racemase 4165428..4166285 Escherichia coli str. K-12 substr. MG1655 948467 b3972 CDS murB NC_000913.3 4172057 4173085 D UDP-N-acetylenolpyruvoylglucosamine reductase; UDP-N-acetylenolpyruvoylglucosamine reductase, FAD-binding 4172057..4173085 Escherichia coli str. K-12 substr. MG1655 948470 b3973 CDS birA NC_000913.3 4173082 4174047 D biotin-[acetylCoA carboxylase] holoenzyme synthetase and biotin operon repressor; bifunctional biotin-[acetylCoA carboxylase] holoenzyme synthetase/ DNA-binding transcriptional repressor, bio-5'-AMP-binding 4173082..4174047 Escherichia coli str. K-12 substr. MG1655 948469 b3974 CDS coaA NC_000913.3 4174076 4175026 R pantothenate kinase complement(4174076..4175026) Escherichia coli str. K-12 substr. MG1655 948479 b3980 CDS tufB NC_000913.3 4175944 4177128 D translation elongation factor EF-Tu 2 4175944..4177128 Escherichia coli str. K-12 substr. MG1655 948482 b3981 CDS secE NC_000913.3 4177358 4177741 D preprotein translocase; preprotein translocase membrane subunit 4177358..4177741 Escherichia coli str. K-12 substr. MG1655 948486 b3982 CDS nusG NC_000913.3 4177743 4178288 D component in transcription antitermination; transcription termination factor 4177743..4178288 Escherichia coli str. K-12 substr. MG1655 948485 b3983 CDS rplK NC_000913.3 4178447 4178875 D 50S ribosomal subunit protein L11 4178447..4178875 Escherichia coli str. K-12 substr. MG1655 948484 b3984 CDS rplA NC_000913.3 4178879 4179583 D 50S ribosomal subunit protein L1, regulates synthesis of L1 and L11; 50S ribosomal subunit protein L1 4178879..4179583 Escherichia coli str. K-12 substr. MG1655 948483 b3985 CDS rplJ NC_000913.3 4179996 4180493 D 50S ribosomal subunit protein L10 4179996..4180493 Escherichia coli str. K-12 substr. MG1655 948490 b3986 CDS rplL NC_000913.3 4180560 4180925 D 50S ribosomal subunit protein L7/L12 4180560..4180925 Escherichia coli str. K-12 substr. MG1655 948489 b3987 CDS rpoB NC_000913.3 4181245 4185273 D RNA polymerase, beta subunit 4181245..4185273 Escherichia coli str. K-12 substr. MG1655 948488 b3988 CDS rpoC NC_000913.3 4185350 4189573 D RNA polymerase, beta prime subunit 4185350..4189573 Escherichia coli str. K-12 substr. MG1655 948487 b3989 CDS yjaZ NC_000913.3 4189786 4190325 D heat shock protein htrC; stationary phase growth adaptation protein 4189786..4190325 Escherichia coli str. K-12 substr. MG1655 948495 b3990 CDS thiH NC_000913.3 4190735 4191868 R tyrosine lyase, involved in thiamine-thiazole moiety synthesis complement(4190735..4191868) Escherichia coli str. K-12 substr. MG1655 948494 b3991 CDS thiG NC_000913.3 4191865 4192635 R thiamin (thiazole moiety) biosynthesis protein; thiamine biosynthesis ThiGH complex subunit complement(4191865..4192635) Escherichia coli str. K-12 substr. MG1655 948493 b4407 CDS thiS NC_000913.3 4192637 4192837 R sulfur carrier protein; immediate sulfur donor in thiazole formation complement(4192637..4192837) Escherichia coli str. K-12 substr. MG1655 2847702 b3992 CDS thiF NC_000913.3 4192821 4193576 R adenylyltransferase; adenylyltransferase, modifies ThiS C-terminus complement(4192821..4193576) Escherichia coli str. K-12 substr. MG1655 948500 b3993 CDS thiE NC_000913.3 4193569 4194204 R thiamin-phosphate synthase (thiamine-phosphate pyrophosphorylase); thiamine phosphate synthase (thiamine phosphate pyrophosphorylase) complement(4193569..4194204) Escherichia coli str. K-12 substr. MG1655 948491 b3994 CDS thiC NC_000913.3 4194204 4196099 R phosphomethylpyrimidine synthase complement(4194204..4196099) Escherichia coli str. K-12 substr. MG1655 948492 b3995 CDS rsd NC_000913.3 4196332 4196808 R stationary phase protein, binds sigma 70 RNA polymerase subunit complement(4196332..4196808) Escherichia coli str. K-12 substr. MG1655 948496 b3996 CDS nudC NC_000913.3 4196903 4197676 D NADH pyrophosphatase 4196903..4197676 Escherichia coli str. K-12 substr. MG1655 948498 b3997 CDS hemE NC_000913.3 4197716 4198780 D uroporphyrinogen decarboxylase 4197716..4198780 Escherichia coli str. K-12 substr. MG1655 948497 b3998 CDS nfi NC_000913.3 4198790 4199461 D endonuclease V (deoxyinosine 3'endoduclease); endonuclease V; deoxyinosine 3' endonuclease 4198790..4199461 Escherichia coli str. K-12 substr. MG1655 948502 b3999 CDS yjaG NC_000913.3 4199504 4200094 D DUF416 domain protein 4199504..4200094 Escherichia coli str. K-12 substr. MG1655 948501 b4000 CDS hupA NC_000913.3 4200281 4200553 D DNA-binding protein HU-alpha (HU-2); HU, DNA-binding transcriptional regulator, alpha subunit 4200281..4200553 Escherichia coli str. K-12 substr. MG1655 948499 b4001 CDS yjaH NC_000913.3 4200566 4201261 D DUF1481 family putative lipoprotein 4200566..4201261 Escherichia coli str. K-12 substr. MG1655 948508 b4002 CDS zraP NC_000913.3 4201263 4201688 R Zn-dependent periplasmic chaperone complement(4201263..4201688) Escherichia coli str. K-12 substr. MG1655 948507 b4003 CDS zraS NC_000913.3 4201926 4203323 D sensory histidine kinase in two-component regulatory system with ZraR 4201926..4203323 Escherichia coli str. K-12 substr. MG1655 948506 b4004 CDS zraR NC_000913.3 4203320 4204645 D fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein 4203320..4204645 Escherichia coli str. K-12 substr. MG1655 948505 b4005 CDS purD NC_000913.3 4204642 4205931 R phosphoribosylglycinamide synthetase = GAR synthetase; phosphoribosylglycinamide synthetase phosphoribosylamine-glycine ligase complement(4204642..4205931) Escherichia coli str. K-12 substr. MG1655 948504 b4006 CDS purH NC_000913.3 4205943 4207532 R IMP cyclohydrolase and phosphoribosylaminoimidazolecarboxamide formyltransferase complement(4205943..4207532) Escherichia coli str. K-12 substr. MG1655 948503 b4011 CDS yjaA NC_000913.3 4213234 4213617 D stress-induced protein 4213234..4213617 Escherichia coli str. K-12 substr. MG1655 948515 b4012 CDS yjaB NC_000913.3 4213680 4214123 R GNAT-family putative N-acetyltransferase; acetyl coenzyme A-binding protein complement(4213680..4214123) Escherichia coli str. K-12 substr. MG1655 948514 b4013 CDS metA NC_000913.3 4214280 4215209 D homoserine O-transsuccinylase 4214280..4215209 Escherichia coli str. K-12 substr. MG1655 948513 b4014 CDS aceB NC_000913.3 4215478 4217079 D malate synthase A 4215478..4217079 Escherichia coli str. K-12 substr. MG1655 948512 b4015 CDS aceA NC_000913.3 4217109 4218413 D isocitrate lyase 4217109..4218413 Escherichia coli str. K-12 substr. MG1655 948517 b4016 CDS aceK NC_000913.3 4218596 4220332 D isocitrate dehydrogenase kinase/phosphatase 4218596..4220332 Escherichia coli str. K-12 substr. MG1655 944797 b4017 CDS arpA NC_000913.3 4220301 4222487 R ankyrin repeat protein complement(4220301..4222487) Escherichia coli str. K-12 substr. MG1655 944933 b4018 CDS iclR NC_000913.3 4222804 4223628 R repressor of aceBA operon; transcriptional repressor complement(4222804..4223628) Escherichia coli str. K-12 substr. MG1655 948524 b4019 CDS metH NC_000913.3 4223828 4227511 D B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase, repressor of metE and metF; homocysteine-N5-methyltetrahydrofolate transmethylase, B12-dependent 4223828..4227511 Escherichia coli str. K-12 substr. MG1655 948522 b4020 CDS yjbB NC_000913.3 4227731 4229362 D putative alpha helix protein; putative Na+/Pi-cotransporter 4227731..4229362 Escherichia coli str. K-12 substr. MG1655 948521 b4021 CDS pepE NC_000913.3 4229453 4230142 R peptidase E, a dipeptidase where amino-terminal residue is aspartate; peptidase E, alpha-aspartyl dipeptidase complement(4229453..4230142) Escherichia coli str. K-12 substr. MG1655 948520 b4022 CDS rluF NC_000913.3 4230354 4231226 D 23S rRNA pseudouridine(2604) synthase 4230354..4231226 Escherichia coli str. K-12 substr. MG1655 948519 b4023 CDS yjbD NC_000913.3 4231359 4231631 R DUF3811 family protein complement(4231359..4231631) Escherichia coli str. K-12 substr. MG1655 948518 b4024 CDS lysC NC_000913.3 4231884 4233233 R aspartokinase III, lysine sensitive; lysine-sensitive aspartokinase 3 complement(4231884..4233233) Escherichia coli str. K-12 substr. MG1655 948531 b4025 CDS pgi NC_000913.3 4233758 4235407 D glucosephosphate isomerase 4233758..4235407 Escherichia coli str. K-12 substr. MG1655 948535 b4026 CDS yjbE NC_000913.3 4235906 4236148 D extracellular polysaccharide production threonine-rich protein 4235906..4236148 Escherichia coli str. K-12 substr. MG1655 948534 b4027 CDS yjbF NC_000913.3 4236262 4236900 D extracellular polysaccharide production lipoprotein 4236262..4236900 Escherichia coli str. K-12 substr. MG1655 948533 b4028 CDS yjbG NC_000913.3 4236897 4237634 D extracellular polysaccharide export OMA protein 4236897..4237634 Escherichia coli str. K-12 substr. MG1655 948526 b4029 CDS yjbH NC_000913.3 4237634 4239730 D DUF940 family extracellular polysaccharide protein 4237634..4239730 Escherichia coli str. K-12 substr. MG1655 948527 b4620 CDS yjbT NC_000913.3 4239777 4240055 R putative periplasmic protein complement(4239777..4240055) Escherichia coli str. K-12 substr. MG1655 5061528 b4030 CDS psiE NC_000913.3 4240325 4240735 D phosphate starvation inducible protein 4240325..4240735 Escherichia coli str. K-12 substr. MG1655 948528 b4031 CDS xylE NC_000913.3 4240779 4242254 R xylose-proton symport; D-xylose transporter complement(4240779..4242254) Escherichia coli str. K-12 substr. MG1655 948529 b4032 CDS malG NC_000913.3 4242626 4243516 R part of maltose permease, inner membrane; membrane component of ABC superfamily; maltose transporter subunit complement(4242626..4243516) Escherichia coli str. K-12 substr. MG1655 948530 b4033 CDS malF NC_000913.3 4243531 4245075 R part of maltose permease, periplasmic; membrane component of ABC superfamily; maltose transporter subunit complement(4243531..4245075) Escherichia coli str. K-12 substr. MG1655 948532 b4034 CDS malE NC_000913.3 4245229 4246419 R periplasmic maltose-binding protein; substrate recognition for transport and chemotaxis; periplasmic-binding component of ABC superfamily; maltose transporter subunit complement(4245229..4246419) Escherichia coli str. K-12 substr. MG1655 948538 b4035 CDS malK NC_000913.3 4246784 4247899 D ATP-binding component of transport system for maltose; maltose ABC transportor ATPase 4246784..4247899 Escherichia coli str. K-12 substr. MG1655 948537 b4036 CDS lamB NC_000913.3 4247971 4249311 D phage lambda receptor protein; maltose high-affinity receptor; maltose outer membrane porin (maltoporin) 4247971..4249311 Escherichia coli str. K-12 substr. MG1655 948548 b4037 CDS malM NC_000913.3 4249554 4250474 D periplasmic protein of mal regulon; maltose regulon periplasmic protein 4249554..4250474 Escherichia coli str. K-12 substr. MG1655 948547 b4038 CDS yjbI NC_000913.3 4250703 4252283 D pseudogene, SopA-related, pentapeptide repeats-containing; <NA> join(4250703..4250885,4250885..4250959,4250961..4252283) Escherichia coli str. K-12 substr. MG1655 948546 b4039 CDS ubiC NC_000913.3 4252506 4253003 D chorismate lyase; chorismate--pyruvate lyase 4252506..4253003 Escherichia coli str. K-12 substr. MG1655 948545 b4040 CDS ubiA NC_000913.3 4253016 4253888 D 4-hydroxybenzoate-octaprenyltransferase; p-hydroxybenzoate octaprenyltransferase 4253016..4253888 Escherichia coli str. K-12 substr. MG1655 948540 b4041 CDS plsB NC_000913.3 4254043 4256466 R glycerol-3-phosphate acyltransferase; glycerol-3-phosphate O-acyltransferase complement(4254043..4256466) Escherichia coli str. K-12 substr. MG1655 948541 b4042 CDS dgkA NC_000913.3 4256637 4257005 D diacylglycerol kinase 4256637..4257005 Escherichia coli str. K-12 substr. MG1655 948543 b4043 CDS lexA NC_000913.3 4257115 4257723 D regulator for SOS(lexA) regulon; transcriptional repressor of SOS regulon 4257115..4257723 Escherichia coli str. K-12 substr. MG1655 948544 b4044 CDS dinF NC_000913.3 4257742 4259121 D DNA-damage-inducible protein F; oxidative stress resistance protein; putative MATE family efflux pump; UV and mitomycin C inducible protein 4257742..4259121 Escherichia coli str. K-12 substr. MG1655 948554 b4045 CDS yjbJ NC_000913.3 4259237 4259446 D stress-induced protein, UPF0337 family 4259237..4259446 Escherichia coli str. K-12 substr. MG1655 948553 b4046 CDS zur NC_000913.3 4259488 4260003 R transcriptional repressor, Zn(II)-binding complement(4259488..4260003) Escherichia coli str. K-12 substr. MG1655 948552 b4047 CDS yjbL NC_000913.3 4260321 4260575 D uncharacterized protein 4260321..4260575 Escherichia coli str. K-12 substr. MG1655 948551 b4048 CDS yjbM NC_000913.3 4260599 4261306 D uncharacterized protein 4260599..4261306 Escherichia coli str. K-12 substr. MG1655 948550 b4049 CDS dusA NC_000913.3 4261669 4262706 D tRNA-dihydrouridine synthase A 4261669..4262706 Escherichia coli str. K-12 substr. MG1655 948558 b4050 CDS pspG NC_000913.3 4262840 4263082 D phage shock protein G 4262840..4263082 Escherichia coli str. K-12 substr. MG1655 948557 b4051 CDS qorA NC_000913.3 4263248 4264231 R quinone oxidoreductase; quinone oxidoreductase, NADPH-dependent complement(4263248..4264231) Escherichia coli str. K-12 substr. MG1655 948556 b4052 CDS dnaB NC_000913.3 4264314 4265729 D replicative DNA helicase; part of primosome; replicative DNA helicase 4264314..4265729 Escherichia coli str. K-12 substr. MG1655 948555 b4053 CDS alr NC_000913.3 4265782 4266861 D alanine racemase 1; alanine racemase, biosynthetic, PLP-binding 4265782..4266861 Escherichia coli str. K-12 substr. MG1655 948564 b4054 CDS tyrB NC_000913.3 4267114 4268307 D tyrosine aminotransferase, tyrosine repressible; tyrosine aminotransferase, tyrosine-repressible, PLP-dependent 4267114..4268307 Escherichia coli str. K-12 substr. MG1655 948563 b4621 CDS yjbS NC_000913.3 4268809 4269012 R uncharacterized protein complement(4268809..4269012) Escherichia coli str. K-12 substr. MG1655 5061529 b4055 CDS aphA NC_000913.3 4269414 4270127 D diadenosine tetraphosphatase; acid phosphatase/phosphotransferase, class B, non-specific 4269414..4270127 Escherichia coli str. K-12 substr. MG1655 948562 b4056 CDS yjbQ NC_000913.3 4270238 4270654 D thiamine phosphate synthase 4270238..4270654 Escherichia coli str. K-12 substr. MG1655 948561 b4057 CDS yjbR NC_000913.3 4270658 4271014 D DUF419 family protein 4270658..4271014 Escherichia coli str. K-12 substr. MG1655 948560 b4058 CDS uvrA NC_000913.3 4271049 4273871 R excision nuclease subunit A; ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC complement(4271049..4273871) Escherichia coli str. K-12 substr. MG1655 948559 b4059 CDS ssb NC_000913.3 4274125 4274661 D ssDNA-binding protein; single-stranded DNA-binding protein 4274125..4274661 Escherichia coli str. K-12 substr. MG1655 948570 b4060 CDS yjcB NC_000913.3 4274760 4275041 R putative inner membrane protein complement(4274760..4275041) Escherichia coli str. K-12 substr. MG1655 948569 b4061 CDS yjcC NC_000913.3 4275471 4277057 D putative membrane-anchored cyclic-di-GMP phosphodiesterase 4275471..4277057 Escherichia coli str. K-12 substr. MG1655 948568 b4062 CDS soxS NC_000913.3 4277060 4277383 R regulation of superoxide response regulon; superoxide response regulon transcriptional activator; autoregulator complement(4277060..4277383) Escherichia coli str. K-12 substr. MG1655 948567 b4063 CDS soxR NC_000913.3 4277469 4277933 D redox-sensing activator of soxS; redox-sensitive transcriptional activator of soxS; autorepressor 4277469..4277933 Escherichia coli str. K-12 substr. MG1655 948566 b4064 CDS ghxP NC_000913.3 4278479 4279828 D guanine/hypoxanthine permease, high affinity; guanine/hypoxanthine:H+ symporter 4278479..4279828 Escherichia coli str. K-12 substr. MG1655 948565 b4065 CDS yjcE NC_000913.3 4279980 4281629 D putative cation/proton antiporter 4279980..4281629 Escherichia coli str. K-12 substr. MG1655 948577 b4066 CDS yjcF NC_000913.3 4281783 4283075 R pentapeptide repeats protein complement(4281783..4283075) Escherichia coli str. K-12 substr. MG1655 948576 b4067 CDS actP NC_000913.3 4283253 4284902 R acetate permease; also transports glycolate with a rate high enough to support growth on this carbon source; acetate transporter complement(4283253..4284902) Escherichia coli str. K-12 substr. MG1655 948575 b4068 CDS yjcH NC_000913.3 4284899 4285213 R DUF485 family inner membrane protein complement(4284899..4285213) Escherichia coli str. K-12 substr. MG1655 948574 b4069 CDS acs NC_000913.3 4285413 4287371 R acetyl-CoA synthetase complement(4285413..4287371) Escherichia coli str. K-12 substr. MG1655 948572 b4070 CDS nrfA NC_000913.3 4287764 4289200 D periplasmic cytochrome c(552): plays a role in nitrite reduction; nitrite reductase, formate-dependent, cytochrome 4287764..4289200 Escherichia coli str. K-12 substr. MG1655 948571 b4071 CDS nrfB NC_000913.3 4289245 4289811 D formate-dependent nitrite reductase; a penta-haeme cytochrome c; nitrite reductase, formate-dependent, penta-heme cytochrome c 4289245..4289811 Escherichia coli str. K-12 substr. MG1655 948573 b4072 CDS nrfC NC_000913.3 4289808 4290479 D formate-dependent nitrite reductase; Fe-S centers; formate-dependent nitrite reductase, 4Fe4S subunit 4289808..4290479 Escherichia coli str. K-12 substr. MG1655 948581 b4073 CDS nrfD NC_000913.3 4290476 4291432 D formate-dependent nitrate reductase complex; transmembrane protein; formate-dependent nitrite reductase, membrane subunit 4290476..4291432 Escherichia coli str. K-12 substr. MG1655 948580 b4074 CDS nrfE NC_000913.3 4291512 4293170 D formate-dependent nitrite reductase; possible assembly function; heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfE 4291512..4293170 Escherichia coli str. K-12 substr. MG1655 948579 b4075 CDS nrfF NC_000913.3 4293163 4293546 D part of formate-dependent nitrite reductase complex; heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfF 4293163..4293546 Escherichia coli str. K-12 substr. MG1655 948578 b4076 CDS nrfG NC_000913.3 4293543 4294139 D part of formate-dependent nitrite reductase complex; heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfG 4293543..4294139 Escherichia coli str. K-12 substr. MG1655 948592 b4077 CDS gltP NC_000913.3 4294481 4295794 D glutamate-aspartate symport protein; glutamate/aspartate:proton symporter 4294481..4295794 Escherichia coli str. K-12 substr. MG1655 948591 b4078 CDS yjcO NC_000913.3 4296436 4297125 R Sel1 family TPR-like repeat protein complement(4296436..4297125) Escherichia coli str. K-12 substr. MG1655 948586 b4079 CDS fdhF NC_000913.3 4297219 4299366 R selenopolypeptide subunit of formate dehydrogenase H; formate dehydrogenase-H, selenopolypeptide subunit complement(4297219..4299366) Escherichia coli str. K-12 substr. MG1655 948584 b4080 CDS mdtP NC_000913.3 4299564 4301030 R putative enzyme; outer membrane factor of efflux pump complement(4299564..4301030) Escherichia coli str. K-12 substr. MG1655 948583 b4081 CDS mdtO NC_000913.3 4301027 4303078 R putative enzyme; membrane translocase (MDR) of MdtNOP efflux pump, PET family complement(4301027..4303078) Escherichia coli str. K-12 substr. MG1655 948582 b4082 CDS mdtN NC_000913.3 4303078 4304109 R putative membrane protein; membrane fusion protein of efflux pump complement(4303078..4304109) Escherichia coli str. K-12 substr. MG1655 948598 b4622 CDS ytcA NC_000913.3 4304128 4304403 R putative inner membrane efflux pump-associated DUF1656 family protein complement(4304128..4304403) Escherichia coli str. K-12 substr. MG1655 5061530 b4083 CDS yjcS NC_000913.3 4304612 4306597 R metallo-beta-lactamase superfamily protein complement(4304612..4306597) Escherichia coli str. K-12 substr. MG1655 948597 b4084 CDS alsK NC_000913.3 4306870 4307799 R D-allose kinase complement(4306870..4307799) Escherichia coli str. K-12 substr. MG1655 948596 b4085 CDS alsE NC_000913.3 4307783 4308478 R allulose-6-phosphate 3-epimerase complement(4307783..4308478) Escherichia coli str. K-12 substr. MG1655 948595 b4086 CDS alsC NC_000913.3 4308489 4309469 R membrane component of ABC superfamily; D-allose ABC transporter permease complement(4308489..4309469) Escherichia coli str. K-12 substr. MG1655 948594 b4087 CDS alsA NC_000913.3 4309448 4310980 R D-allose ABC transporter ATPase complement(4309448..4310980) Escherichia coli str. K-12 substr. MG1655 948593 b4088 CDS alsB NC_000913.3 4311107 4312042 R periplasmic-binding component of ABC superfamily; D-allose ABC transporter periplasmic binding protein complement(4311107..4312042) Escherichia coli str. K-12 substr. MG1655 948604 b4089 CDS alsR NC_000913.3 4312101 4312991 R transcriptional repressor of rpiB expression; d-allose-inducible als operon transcriptional repressor; autorepressor; repressor of rpiR complement(4312101..4312991) Escherichia coli str. K-12 substr. MG1655 948603 b4090 CDS rpiB NC_000913.3 4313350 4313799 D ribose 5-phosphate isomerase B; ribose 5-phosphate isomerase B/allose 6-phosphate isomerase 4313350..4313799 Escherichia coli str. K-12 substr. MG1655 948602 b4487 CDS yjdP NC_000913.3 4313868 4314197 D conserved hypothetical protein; conserved in EDL933 and CFT073; on opposite strand of the now deaccessioned phnQ (b4091); putative periplasmic protein 4313868..4314197 Escherichia coli str. K-12 substr. MG1655 2847754 b4092 CDS phnP NC_000913.3 4314344 4315102 R phosphonate metabolism; 5-phospho-alpha-D-ribosyl 1,2-cyclic phosphate phosphodiesterase complement(4314344..4315102) Escherichia coli str. K-12 substr. MG1655 948600 b4093 CDS phnO NC_000913.3 4315104 4315538 R putative regulator, phn operon; aminoalkylphosphonate N-acetyltransferase complement(4315104..4315538) Escherichia coli str. K-12 substr. MG1655 948599 b4094 CDS phnN NC_000913.3 4315525 4316082 R ATP-binding component of phosphonate transport; ribose 1,5-bisphosphokinase complement(4315525..4316082) Escherichia coli str. K-12 substr. MG1655 948608 b4095 CDS phnM NC_000913.3 4316082 4317218 R phosphonate metabolism; ribophosphonate triphosphate hydrolase complement(4316082..4317218) Escherichia coli str. K-12 substr. MG1655 948613 b4096 CDS phnL NC_000913.3 4317215 4317895 R ATP-binding component of phosphonate transport; ribophosphonate triphosphate synthase subunit; putative ABC transporter-related ATPase complement(4317215..4317895) Escherichia coli str. K-12 substr. MG1655 948612 b4097 CDS phnK NC_000913.3 4318006 4318764 R ATP-binding component of phosphonate transport; carbon-phosphorus lyase complex subunit, putative ATP transporter ATP-binding protein complement(4318006..4318764) Escherichia coli str. K-12 substr. MG1655 948611 b4098 CDS phnJ NC_000913.3 4318761 4319606 R phosphonate metabolism; carbon-phosphorus lyase, SAM-dependent complement(4318761..4319606) Escherichia coli str. K-12 substr. MG1655 948606 b4099 CDS phnI NC_000913.3 4319599 4320663 R phosphonate metabolism; ribophosphonate triphosphate synthase complex putative catalytic subunit complement(4319599..4320663) Escherichia coli str. K-12 substr. MG1655 948605 b4100 CDS phnH NC_000913.3 4320663 4321247 R phosphonate metabolism; ribophosphonate triphosphate synthase subunit complement(4320663..4321247) Escherichia coli str. K-12 substr. MG1655 948619 b4101 CDS phnG NC_000913.3 4321244 4321696 R phosphonate metabolism; ribophosphonate triphosphate synthase subunit complement(4321244..4321696) Escherichia coli str. K-12 substr. MG1655 948618 b4102 CDS phnF NC_000913.3 4321697 4322422 R putative transcriptional regulator; putative DNA-binding transcriptional regulator of phosphonate uptake and biodegradation complement(4321697..4322422) Escherichia coli str. K-12 substr. MG1655 948617 b4104 CDS phnE NC_000913.3 4322443 4323230 R defective phosphonate ABC transporter permease;transport; Transport of small molecules: Anions; membrane channel protein component of Pn transporter; membrane component of ABC superfamily; <NA> complement(join(4322443..4322814,4322805..4323230)) Escherichia coli str. K-12 substr. MG1655 948625 b4105 CDS phnD NC_000913.3 4323336 4324352 R periplasmic binding protein component of Pn transporter; periplasmic binding component of ABC superfamily; phosphonate ABC transporter periplasmic binding protein complement(4323336..4324352) Escherichia coli str. K-12 substr. MG1655 948624 b4106 CDS phnC NC_000913.3 4324377 4325165 R ATP-binding component of phosphonate transport; ATP-binding component of ABC superfamily; phosphonate ABC transporter ATPase complement(4324377..4325165) Escherichia coli str. K-12 substr. MG1655 948623 b4107 CDS yjdN NC_000913.3 4325298 4325741 R metalloprotein superfamily protein complement(4325298..4325741) Escherichia coli str. K-12 substr. MG1655 948622 b4108 CDS yjdM NC_000913.3 4326399 4326734 R zinc-ribbon family protein complement(4326399..4326734) Escherichia coli str. K-12 substr. MG1655 948621 b4109 CDS crfC NC_000913.3 4327135 4329363 D putative vimentin; clamp-binding sister replication fork colocalization protein, dynamin-related 4327135..4329363 Escherichia coli str. K-12 substr. MG1655 948620 b4110 CDS yjcZ NC_000913.3 4329360 4330238 D YjcZ family protein; yhjH motility defect suppressor 4329360..4330238 Escherichia coli str. K-12 substr. MG1655 948633 b4111 CDS proP NC_000913.3 4330502 4332004 D low-affinity transport system; proline permease II; proline/glycine betaine transporter 4330502..4332004 Escherichia coli str. K-12 substr. MG1655 948626 b4703 CDS pmrR NC_000913.3 4332116 4332205 D putative membrane-bound BasS regulator 4332116..4332205 Escherichia coli str. K-12 substr. MG1655 11115379 b4112 CDS basS NC_000913.3 4332181 4333272 R sensor protein for basR; sensory histidine kinase in two-component regulatory system with BasR complement(4332181..4333272) Escherichia coli str. K-12 substr. MG1655 948632 b4113 CDS basR NC_000913.3 4333282 4333950 R transcriptional regulatory protein, member of 2-component regulatory system; response regulator in two-component regulatory system with BasS complement(4333282..4333950) Escherichia coli str. K-12 substr. MG1655 948631 b4114 CDS eptA NC_000913.3 4333947 4335590 R lipid A phosphoethanolamine transferase complement(4333947..4335590) Escherichia coli str. K-12 substr. MG1655 948629 b4115 CDS adiC NC_000913.3 4335694 4337031 R putative amino acid/amine transport protein, cryptic; arginine:agmatine antiporter complement(4335694..4337031) Escherichia coli str. K-12 substr. MG1655 948628 b4116 CDS adiY NC_000913.3 4337168 4337929 R putative ARAC-type regulatory protein; adi system transcriptional activator complement(4337168..4337929) Escherichia coli str. K-12 substr. MG1655 948627 b4117 CDS adiA NC_000913.3 4338254 4340521 R arginine decarboxylase complement(4338254..4340521) Escherichia coli str. K-12 substr. MG1655 948638 b4118 CDS melR NC_000913.3 4340720 4341628 R regulator of melibiose operon; melibiose operon transcriptional regulator; autoregulator complement(4340720..4341628) Escherichia coli str. K-12 substr. MG1655 948637 b4119 CDS melA NC_000913.3 4341911 4343266 D alpha-galactosidase; alpha-galactosidase, NAD(P)-binding 4341911..4343266 Escherichia coli str. K-12 substr. MG1655 948636 b4120 CDS melB NC_000913.3 4343369 4344790 D melibiose permease II; melibiose:sodium symporter 4343369..4344790 Escherichia coli str. K-12 substr. MG1655 948635 b4121 CDS yjdF NC_000913.3 4344929 4345558 R DUF2238 family inner membrane protein complement(4344929..4345558) Escherichia coli str. K-12 substr. MG1655 948634 b4122 CDS fumB NC_000913.3 4345680 4347326 R fumarase B= fumarate hydratase Class I; anaerobic isozyme; anaerobic class I fumarate hydratase (fumarase B) complement(4345680..4347326) Escherichia coli str. K-12 substr. MG1655 948642 b4123 CDS dcuB NC_000913.3 4347404 4348744 R anaerobic dicarboxylate transport; C4-dicarboxylate transporter, anaerobic; DcuS co-sensor complement(4347404..4348744) Escherichia coli str. K-12 substr. MG1655 948641 b4124 CDS dcuR NC_000913.3 4349315 4350034 R response regulator in two-component regulatory system with DcuS complement(4349315..4350034) Escherichia coli str. K-12 substr. MG1655 948640 b4125 CDS dcuS NC_000913.3 4350031 4351662 R sensory histidine kinase in two-component regulatory system with DcuR, regulator of anaerobic fumarate respiration complement(4350031..4351662) Escherichia coli str. K-12 substr. MG1655 948639 b4126 CDS yjdI NC_000913.3 4351843 4352073 D putative 4Fe-4S mono-cluster protein 4351843..4352073 Escherichia coli str. K-12 substr. MG1655 948648 b4127 CDS yjdJ NC_000913.3 4352085 4352357 D GNAT family putative N-acetyltransferase 4352085..4352357 Escherichia coli str. K-12 substr. MG1655 948647 b4128 CDS ghoS NC_000913.3 4352584 4352880 D antitoxin of GhoTS toxin-antitoxin pair; endonuclease for ghoT mRNA 4352584..4352880 Escherichia coli str. K-12 substr. MG1655 948646 b4559 CDS ghoT NC_000913.3 4352908 4353081 D toxin of GhoTS toxin-antitoxin pair; membrane-lytic protein; stimulator of persister cell formation 4352908..4353081 Escherichia coli str. K-12 substr. MG1655 1450308 b4129 CDS lysU NC_000913.3 4353200 4354717 R lysine tRNA synthetase, inducible; heat shock protein; lysine tRNA synthetase, inducible complement(4353200..4354717) Escherichia coli str. K-12 substr. MG1655 948645 b4130 CDS dtpC NC_000913.3 4354954 4356411 R putative peptide transporter; dipeptide and tripeptide permease complement(4354954..4356411) Escherichia coli str. K-12 substr. MG1655 948644 b4131 CDS cadA NC_000913.3 4356470 4358617 R lysine decarboxylase, acid-inducible complement(4356470..4358617) Escherichia coli str. K-12 substr. MG1655 948643 b4132 CDS cadB NC_000913.3 4358697 4360031 R transport of lysine/cadaverine; putative lysine/cadaverine transporter complement(4358697..4360031) Escherichia coli str. K-12 substr. MG1655 948654 b4133 CDS cadC NC_000913.3 4360396 4361934 R transcriptional activator of cad operon; cadBA operon transcriptional activator complement(4360396..4361934) Escherichia coli str. K-12 substr. MG1655 948653 b4654 CDS yjdQ NC_000913.3 4362191 4362353 R pseudogene, P4-like integrase remnant; <NA> complement(join(4362191..4362271,4362270..4362353)) Escherichia coli str. K-12 substr. MG1655 5625580 b4135 CDS yjdC NC_000913.3 4362733 4363308 R putative transcriptional regulator complement(4362733..4363308) Escherichia coli str. K-12 substr. MG1655 948650 b4136 CDS dsbD NC_000913.3 4363345 4365042 R thiol:disulfide interchange protein; copper tolerance; thiol:disulfide interchange protein and activator of DsbC complement(4363345..4365042) Escherichia coli str. K-12 substr. MG1655 948649 b4137 CDS cutA NC_000913.3 4365018 4365356 R divalent cation tolerance protein; cytochrome c biogenesis; divalent-cation tolerance protein, copper sensitivity complement(4365018..4365356) Escherichia coli str. K-12 substr. MG1655 948660 b4138 CDS dcuA NC_000913.3 4365472 4366773 R anaerobic dicarboxylate transport; C4-dicarboxylate antiporter complement(4365472..4366773) Escherichia coli str. K-12 substr. MG1655 948659 b4139 CDS aspA NC_000913.3 4366891 4368327 R aspartate ammonia-lyase (aspartase); aspartate ammonia-lyase complement(4366891..4368327) Escherichia coli str. K-12 substr. MG1655 948658 b4140 CDS fxsA NC_000913.3 4368664 4369140 D suppressor of F exclusion of phage T7 4368664..4369140 Escherichia coli str. K-12 substr. MG1655 948657 b4141 CDS yjeH NC_000913.3 4369156 4370412 R putative transport; putative transporter complement(4369156..4370412) Escherichia coli str. K-12 substr. MG1655 948656 b4142 CDS groS NC_000913.3 4370688 4370981 D GroES, 10 Kd chaperone binds to Hsp60 in pres. Mg-ATP, suppressing its ATPase activity; Cpn10 chaperonin GroES, small subunit of GroESL 4370688..4370981 Escherichia coli str. K-12 substr. MG1655 948655 b4143 CDS groL NC_000913.3 4371025 4372671 D Cpn60 chaperonin GroEL, large subunit of GroESL 4371025..4372671 Escherichia coli str. K-12 substr. MG1655 948665 b4144 CDS yjeI NC_000913.3 4372809 4373162 D DUF4156 family lipoprotein 4372809..4373162 Escherichia coli str. K-12 substr. MG1655 948664 b4145 CDS yjeJ NC_000913.3 4373365 4374234 R uncharacterized protein complement(4373365..4374234) Escherichia coli str. K-12 substr. MG1655 948663 b4146 CDS epmB NC_000913.3 4374629 4375657 R EF-P-Lys34 lysylation protein; weak lysine 2,3-aminomutase complement(4374629..4375657) Escherichia coli str. K-12 substr. MG1655 948662 b4147 CDS efp NC_000913.3 4375699 4376265 D elongation factor P (EF-P); polyproline-specific translation elongation factor EF-P 4375699..4376265 Escherichia coli str. K-12 substr. MG1655 948661 b4410 CDS ecnA NC_000913.3 4376317 4376442 D entericidin A; antidote to lipoprotein entericidin B; component of a chromosomally encoded addiction module; entericidin A membrane lipoprotein, antidote entericidin B 4376317..4376442 Escherichia coli str. K-12 substr. MG1655 2847736 b4411 CDS ecnB NC_000913.3 4376553 4376699 D entericidin B; bacteriolytic lipoprotein; component of a chromosomally encoded addiction module; entericidin B membrane lipoprotein 4376553..4376699 Escherichia coli str. K-12 substr. MG1655 2847737 b4148 CDS sugE NC_000913.3 4376875 4377192 D suppresses groEL, may be chaperone; multidrug efflux system protein 4376875..4377192 Escherichia coli str. K-12 substr. MG1655 948671 b4149 CDS blc NC_000913.3 4377189 4377722 R outer membrane lipoprotein cell division and growth lipocalin complement(4377189..4377722) Escherichia coli str. K-12 substr. MG1655 948670 b4150 CDS ampC NC_000913.3 4377811 4378944 R beta-lactamase; penicillin resistance; penicillin-binding protein; beta-lactamase, intrinsically weak complement(4377811..4378944) Escherichia coli str. K-12 substr. MG1655 948669 b4151 CDS frdD NC_000913.3 4379007 4379366 R fumarate reductase, anaerobic, membrane anchor polypeptide; fumarate reductase (anaerobic), membrane anchor subunit complement(4379007..4379366) Escherichia coli str. K-12 substr. MG1655 948668 b4152 CDS frdC NC_000913.3 4379377 4379772 R fumarate reductase, anaerobic, membrane anchor polypeptide; fumarate reductase (anaerobic), membrane anchor subunit complement(4379377..4379772) Escherichia coli str. K-12 substr. MG1655 948680 b4153 CDS frdB NC_000913.3 4379783 4380517 R fumarate reductase, anaerobic, iron-sulfur protein subunit; fumarate reductase (anaerobic), Fe-S subunit complement(4379783..4380517) Escherichia coli str. K-12 substr. MG1655 948666 b4154 CDS frdA NC_000913.3 4380510 4382318 R fumarate reductase, anaerobic, flavoprotein subunit; anaerobic fumarate reductase catalytic and NAD/flavoprotein subunit complement(4380510..4382318) Escherichia coli str. K-12 substr. MG1655 948667 b4155 CDS epmA NC_000913.3 4382643 4383620 D putative lysyl-tRNA synthetase; Elongation Factor P Lys34 lysyltransferase 4382643..4383620 Escherichia coli str. K-12 substr. MG1655 948672 b4156 CDS yjeM NC_000913.3 4383839 4385341 D putative transport; putative transporter 4383839..4385341 Escherichia coli str. K-12 substr. MG1655 948679 b4157 CDS yjeN NC_000913.3 4385393 4385707 D uncharacterized protein 4385393..4385707 Escherichia coli str. K-12 substr. MG1655 948678 b4158 CDS yjeO NC_000913.3 4385704 4386018 D inner membrane protein 4385704..4386018 Escherichia coli str. K-12 substr. MG1655 948677 b4159 CDS mscM NC_000913.3 4386047 4389370 R putative periplasmic binding protein; mechanosensitive channel protein, miniconductance complement(4386047..4389370) Escherichia coli str. K-12 substr. MG1655 948676 b4160 CDS psd NC_000913.3 4389392 4390360 R phosphatidylserine decarboxylase; phospholipid synthesis; phosphatidylserine decarboxylase complement(4389392..4390360) Escherichia coli str. K-12 substr. MG1655 948673 b4161 CDS rsgA NC_000913.3 4390457 4391509 R ribosome small subunit-dependent GTPase A complement(4390457..4391509) Escherichia coli str. K-12 substr. MG1655 948674 b4162 CDS orn NC_000913.3 4391604 4392149 D oligoribonuclease 4391604..4392149 Escherichia coli str. K-12 substr. MG1655 948675 b4670 CDS yjeV NC_000913.3 4392892 4392945 D uncharacterized protein 4392892..4392945 Escherichia coli str. K-12 substr. MG1655 7751630 b4166 CDS queG NC_000913.3 4392928 4394067 R epoxyqueuosine reductase, cobalamine-stimulated; queosine biosynthesis complement(4392928..4394067) Escherichia coli str. K-12 substr. MG1655 948686 b4167 CDS nnr NC_000913.3 4394066 4395613 D bifunctional NAD(P)H-hydrate repair enzyme; C-terminal domain ADP-dependent (S)-NAD(P)H-hydrate dehydratase and N-terminal domain NAD(P)H-hydrate epimerase 4394066..4395613 Escherichia coli str. K-12 substr. MG1655 948685 b4168 CDS tsaE NC_000913.3 4395585 4396046 D tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein; ADP binding protein 4395585..4396046 Escherichia coli str. K-12 substr. MG1655 948684 b4169 CDS amiB NC_000913.3 4396065 4397402 D N-acetylmuramoyl-l-alanine amidase II; a murein hydrolase; N-acetylmuramoyl-l-alanine amidase II 4396065..4397402 Escherichia coli str. K-12 substr. MG1655 948683 b4170 CDS mutL NC_000913.3 4397412 4399259 D enzyme in methyl-directed mismatch repair; methyl-directed mismatch repair protein 4397412..4399259 Escherichia coli str. K-12 substr. MG1655 948691 b4171 CDS miaA NC_000913.3 4399252 4400202 D delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase 4399252..4400202 Escherichia coli str. K-12 substr. MG1655 948690 b4172 CDS hfq NC_000913.3 4400288 4400596 D host factor I for bacteriophage Q beta replication, a growth-related protein; global sRNA chaperone; HF-I, host factor for RNA phage Q beta replication 4400288..4400596 Escherichia coli str. K-12 substr. MG1655 948689 b4173 CDS hflX NC_000913.3 4400672 4401952 D GTP - binding subunit of protease specific for phage lambda cII repressor; GTPase, stimulated by 50S subunit binding; Mn(2+) homeostasis regulator 4400672..4401952 Escherichia coli str. K-12 substr. MG1655 948688 b4174 CDS hflK NC_000913.3 4402038 4403297 D protease specific for phage lambda cII repressor; modulator for HflB protease specific for phage lambda cII repressor 4402038..4403297 Escherichia coli str. K-12 substr. MG1655 948698 b4175 CDS hflC NC_000913.3 4403300 4404304 D protease specific for phage lambda cII repressor; HflB protease modulator specific for phage lambda cII repressor 4403300..4404304 Escherichia coli str. K-12 substr. MG1655 948697 b4176 CDS yjeT NC_000913.3 4404386 4404583 D DUF2065 family protein 4404386..4404583 Escherichia coli str. K-12 substr. MG1655 948696 b4177 CDS purA NC_000913.3 4404687 4405985 D adenylosuccinate synthetase 4404687..4405985 Escherichia coli str. K-12 substr. MG1655 948695 b4178 CDS nsrR NC_000913.3 4406190 4406615 D nitric oxide-sensitive repressor for NO regulon 4406190..4406615 Escherichia coli str. K-12 substr. MG1655 948693 b4179 CDS rnr NC_000913.3 4406654 4409095 D exoribonuclease R, RNase R 4406654..4409095 Escherichia coli str. K-12 substr. MG1655 948692 b4180 CDS rlmB NC_000913.3 4409275 4410006 D 23S rRNA mG2251 2'-O-ribose methyltransferase, SAM-dependent 4409275..4410006 Escherichia coli str. K-12 substr. MG1655 948694 b4181 CDS yjfI NC_000913.3 4410133 4410534 D DUF2170 family protein 4410133..4410534 Escherichia coli str. K-12 substr. MG1655 948704 b4182 CDS yjfJ NC_000913.3 4410553 4411251 D putative alpha helical protein; PspA/IM30 family protein 4410553..4411251 Escherichia coli str. K-12 substr. MG1655 948703 b4183 CDS yjfK NC_000913.3 4411302 4411961 D DUF2491 family protein 4411302..4411961 Escherichia coli str. K-12 substr. MG1655 948702 b4184 CDS yjfL NC_000913.3 4411979 4412377 D UPF0719 family inner membrane protein 4411979..4412377 Escherichia coli str. K-12 substr. MG1655 948701 b4185 CDS yjfM NC_000913.3 4412387 4413025 D DUF1190 family protein 4412387..4413025 Escherichia coli str. K-12 substr. MG1655 948700 b4186 CDS yjfC NC_000913.3 4413028 4414191 D putative synthetase/amidase; ATP-Grasp family ATPase 4413028..4414191 Escherichia coli str. K-12 substr. MG1655 948699 b4187 CDS aidB NC_000913.3 4414275 4415900 D putative acyl coenzyme A dehydrogenase; DNA alkylation damage repair protein; flavin-containing DNA binding protein, weak isovaleryl CoA dehydrogenase 4414275..4415900 Escherichia coli str. K-12 substr. MG1655 948710 b4188 CDS yjfN NC_000913.3 4416017 4416292 R DUF1471 family periplasmic protein complement(4416017..4416292) Escherichia coli str. K-12 substr. MG1655 948709 b4189 CDS bsmA NC_000913.3 4416441 4416770 R bioflm peroxide resistance protein complement(4416441..4416770) Escherichia coli str. K-12 substr. MG1655 948708 b4190 CDS yjfP NC_000913.3 4416952 4417701 D acyl CoA esterase 4416952..4417701 Escherichia coli str. K-12 substr. MG1655 948707 b4191 CDS ulaR NC_000913.3 4417698 4418453 R putative DEOR-type transcriptional regulator; transcriptional repressor for the L-ascorbate utilization divergent operon complement(4417698..4418453) Escherichia coli str. K-12 substr. MG1655 948706 b4192 CDS ulaG NC_000913.3 4418561 4419625 R L-ascorbate 6-phosphate lactonase complement(4418561..4419625) Escherichia coli str. K-12 substr. MG1655 948705 b4193 CDS ulaA NC_000913.3 4419980 4421377 D L-ascorbate-specific enzyme IIC permease component of PTS 4419980..4421377 Escherichia coli str. K-12 substr. MG1655 948717 b4194 CDS ulaB NC_000913.3 4421393 4421698 D L-ascorbate-specific enzyme IIB component of PTS 4421393..4421698 Escherichia coli str. K-12 substr. MG1655 948716 b4195 CDS ulaC NC_000913.3 4421708 4422172 D putative PTS system enzyme II A component; L-ascorbate-specific enzyme IIA component of PTS 4421708..4422172 Escherichia coli str. K-12 substr. MG1655 948715 b4196 CDS ulaD NC_000913.3 4422186 4422836 D probable hexulose-6-phosphate synthase; 3-keto-L-gulonate 6-phosphate decarboxylase 4422186..4422836 Escherichia coli str. K-12 substr. MG1655 948714 b4197 CDS ulaE NC_000913.3 4422846 4423700 D putative hexulose-6-phosphate isomerase; L-xylulose 5-phosphate 3-epimerase 4422846..4423700 Escherichia coli str. K-12 substr. MG1655 948712 b4198 CDS ulaF NC_000913.3 4423700 4424386 D putative epimerase/aldolase; L-ribulose 5-phosphate 4-epimerase 4423700..4424386 Escherichia coli str. K-12 substr. MG1655 948711 b4199 CDS yjfY NC_000913.3 4424516 4424791 R YhcN family protein, periplasmic complement(4424516..4424791) Escherichia coli str. K-12 substr. MG1655 948713 b4200 CDS rpsF NC_000913.3 4425118 4425513 D 30S ribosomal subunit protein S6 4425118..4425513 Escherichia coli str. K-12 substr. MG1655 948723 b4201 CDS priB NC_000913.3 4425520 4425834 D primosomal replication protein N; primosomal protein N 4425520..4425834 Escherichia coli str. K-12 substr. MG1655 948722 b4202 CDS rpsR NC_000913.3 4425839 4426066 D 30S ribosomal subunit protein S18 4425839..4426066 Escherichia coli str. K-12 substr. MG1655 948721 b4203 CDS rplI NC_000913.3 4426108 4426557 D 50S ribosomal subunit protein L9 4426108..4426557 Escherichia coli str. K-12 substr. MG1655 948720 b4204 CDS yjfZ NC_000913.3 4426628 4427422 R uncharacterized protein complement(4426628..4427422) Escherichia coli str. K-12 substr. MG1655 948719 b4205 CDS ytfA NC_000913.3 4427694 4428095 D pseudogene, related to transcriptional regulators; <NA> 4427694..4428095 Escherichia coli str. K-12 substr. MG1655 948718 b4206 CDS ytfB NC_000913.3 4428079 4428717 R OapA family protein complement(4428079..4428717) Escherichia coli str. K-12 substr. MG1655 948727 b4207 CDS fklB NC_000913.3 4428935 4429555 D FKBP-type 22KD peptidyl-prolyl cis-trans isomerase (rotamase); FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) 4428935..4429555 Escherichia coli str. K-12 substr. MG1655 948726 b4208 CDS cycA NC_000913.3 4429864 4431276 D transport of D-alanine, D-serine, and glycine; D-alanine/D-serine/glycine transporter 4429864..4431276 Escherichia coli str. K-12 substr. MG1655 948725 b4209 CDS ytfE NC_000913.3 4431321 4431983 R iron-sulfur cluster repair protein RIC complement(4431321..4431983) Escherichia coli str. K-12 substr. MG1655 948724 b4210 CDS ytfF NC_000913.3 4432091 4433056 R putative transmembrane subunit; DMT transporter family inner membrane protein complement(4432091..4433056) Escherichia coli str. K-12 substr. MG1655 948732 b4211 CDS qorB NC_000913.3 4433164 4434024 R putative oxidoreductase; NAD(P)H:quinone oxidoreductase complement(4433164..4434024) Escherichia coli str. K-12 substr. MG1655 948731 b4212 CDS ytfH NC_000913.3 4434113 4434493 D DUF24 family HxlR-type putative transcriptional regulator 4434113..4434493 Escherichia coli str. K-12 substr. MG1655 948730 b4213 CDS cpdB NC_000913.3 4434622 4436565 R 2':3'-cyclic-nucleotide 2'-phosphodiesterase complement(4434622..4436565) Escherichia coli str. K-12 substr. MG1655 948729 b4214 CDS cysQ NC_000913.3 4436755 4437495 D affects pool of 3'-phosphoadenosine-5'-phosphosulfate in pathway of sulfite synthesis; 3'(2'),5'-bisphosphate nucleotidase 4436755..4437495 Escherichia coli str. K-12 substr. MG1655 948728 b4215 CDS ytfI NC_000913.3 4437707 4438645 D uncharacterized protein 4437707..4438645 Escherichia coli str. K-12 substr. MG1655 948738 b4216 CDS ytfJ NC_000913.3 4438708 4439262 R putative transcriptional regulator complement(4438708..4439262) Escherichia coli str. K-12 substr. MG1655 948737 b4217 CDS ytfK NC_000913.3 4439587 4439793 D DUF1107 family protein 4439587..4439793 Escherichia coli str. K-12 substr. MG1655 948736 b4218 CDS ytfL NC_000913.3 4439872 4441215 R putative transport protein; UPF0053 family inner membrane protein complement(4439872..4441215) Escherichia coli str. K-12 substr. MG1655 948735 b4219 CDS msrA NC_000913.3 4441538 4442176 R peptide methionine sulfoxide reductase; methionine sulfoxide reductase A complement(4441538..4442176) Escherichia coli str. K-12 substr. MG1655 948734 b4220 CDS tamA NC_000913.3 4442382 4444115 D translocation and assembly module for autotransporter export, outer membrane subunit 4442382..4444115 Escherichia coli str. K-12 substr. MG1655 948733 b4221 CDS tamB NC_000913.3 4444112 4447891 D translocation and assembly module for autotransporter export, inner membrane subunit 4444112..4447891 Escherichia coli str. K-12 substr. MG1655 948742 b4222 CDS ytfP NC_000913.3 4447894 4448235 D GGCT-like protein 4447894..4448235 Escherichia coli str. K-12 substr. MG1655 948741 b4224 CDS chpS NC_000913.3 4448447 4448698 D suppressor of inhibitory function of ChpB, PemI-like, autoregulated; antitoxin of the ChpBS toxin-antitoxin system 4448447..4448698 Escherichia coli str. K-12 substr. MG1655 948739 b4225 CDS chpB NC_000913.3 4448692 4449042 D probable growth inhibitor, PemK-like, autoregulated; toxin of the ChpB-ChpS toxin-antitoxin system 4448692..4449042 Escherichia coli str. K-12 substr. MG1655 948747 b4226 CDS ppa NC_000913.3 4449122 4449652 R inorganic pyrophosphatase complement(4449122..4449652) Escherichia coli str. K-12 substr. MG1655 948748 b4227 CDS ytfQ NC_000913.3 4449962 4450918 D putative LACI-type transcriptional regulator; galactofuranose ABC transporter periplasmic binding protein 4449962..4450918 Escherichia coli str. K-12 substr. MG1655 948746 b4485 CDS ytfR NC_000913.3 4451058 4452560 D putative sugar transport protein (ABC superfamily, atp_bind); putative sugar ABC transporter ATPase 4451058..4452560 Escherichia coli str. K-12 substr. MG1655 2847725 b4230 CDS ytfT NC_000913.3 4452571 4453596 D putative transport system permease protein; putative sugar ABC transporter permease 4452571..4453596 Escherichia coli str. K-12 substr. MG1655 948743 b4231 CDS yjfF NC_000913.3 4453583 4454578 D putative transport system permease protein; putative sugar ABC transporter permease 4453583..4454578 Escherichia coli str. K-12 substr. MG1655 948754 b4232 CDS fbp NC_000913.3 4454611 4455609 R fructose-1,6-bisphosphatase I complement(4454611..4455609) Escherichia coli str. K-12 substr. MG1655 948753 b4233 CDS mpl NC_000913.3 4455785 4457158 D UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 4455785..4457158 Escherichia coli str. K-12 substr. MG1655 948752 b4234 CDS yjgA NC_000913.3 4457314 4457865 R putative alpha helix protein; ribosome-associated UPF0307 family protein complement(4457314..4457865) Escherichia coli str. K-12 substr. MG1655 948751 b4235 CDS pmbA NC_000913.3 4457959 4459311 D maturation of antibiotic MccB17, see tld genes; putative antibiotic peptide MccB17 maturation peptidase 4457959..4459311 Escherichia coli str. K-12 substr. MG1655 948750 b4236 CDS cybC NC_000913.3 4459490 4459855 D pseudogene, truncated cytochrome b562; cytochrome b(562); <NA> 4459490..4459855 Escherichia coli str. K-12 substr. MG1655 948758 b4237 CDS nrdG NC_000913.3 4459900 4460364 R anaerobic ribonucleotide reductase activating protein complement(4459900..4460364) Escherichia coli str. K-12 substr. MG1655 948757 b4238 CDS nrdD NC_000913.3 4460522 4462660 R anaerobic ribonucleoside-triphosphate reductase complement(4460522..4462660) Escherichia coli str. K-12 substr. MG1655 948755 b4239 CDS treC NC_000913.3 4463054 4464709 R trehalase 6-P hydrolase; trehalose-6-P hydrolase complement(4463054..4464709) Escherichia coli str. K-12 substr. MG1655 948762 b4240 CDS treB NC_000913.3 4464759 4466180 R PTS system enzyme II, trehalose specific; trehalose-specific PTS enzyme: IIB and IIC component complement(4464759..4466180) Escherichia coli str. K-12 substr. MG1655 948761 b4241 CDS treR NC_000913.3 4466299 4467246 R repressor of treA,B,C; trehalose 6-phosphate-inducible trehalose regulon transcriptional repressor complement(4466299..4467246) Escherichia coli str. K-12 substr. MG1655 948760 b4702 CDS mgtL NC_000913.3 4467431 4467484 D regulatory leader peptide for mgtA 4467431..4467484 Escherichia coli str. K-12 substr. MG1655 9797237 b4242 CDS mgtA NC_000913.3 4467625 4470321 D Mg2+ transport ATPase, P-type 1; magnesium transporter 4467625..4470321 Escherichia coli str. K-12 substr. MG1655 948778 b4243 CDS ridA NC_000913.3 4470527 4470913 R enamine/imine deaminase, reaction intermediate detoxification complement(4470527..4470913) Escherichia coli str. K-12 substr. MG1655 948771 b4244 CDS pyrI NC_000913.3 4470986 4471447 R aspartate carbamoyltransferase, regulatory subunit complement(4470986..4471447) Escherichia coli str. K-12 substr. MG1655 948763 b4245 CDS pyrB NC_000913.3 4471460 4472395 R aspartate carbamoyltransferase, catalytic subunit complement(4471460..4472395) Escherichia coli str. K-12 substr. MG1655 948767 b4246 CDS pyrL NC_000913.3 4472399 4472533 R pyrBI operon leader peptide complement(4472399..4472533) Escherichia coli str. K-12 substr. MG1655 948768 b4248 CDS yjgH NC_000913.3 4472814 4473209 R UPF0131 family protein complement(4472814..4473209) Escherichia coli str. K-12 substr. MG1655 948769 b4249 CDS bdcA NC_000913.3 4473340 4474053 R putative oxidoreductase; c-di-GMP-binding biofilm dispersal mediator protein complement(4473340..4474053) Escherichia coli str. K-12 substr. MG1655 948765 b4251 CDS bdcR NC_000913.3 4474124 4474717 D transcriptional repressor for divergent bdcA 4474124..4474717 Escherichia coli str. K-12 substr. MG1655 948775 b4252 CDS tabA NC_000913.3 4474862 4475314 D biofilm modulator regulated by toxins; DUF386 family protein, cupin superfamily protein 4474862..4475314 Escherichia coli str. K-12 substr. MG1655 948777 b4253 CDS yjgL NC_000913.3 4475437 4477251 D SopA-central-domain-like hexapeptide repeat protein 4475437..4477251 Escherichia coli str. K-12 substr. MG1655 948776 b4254 CDS argI NC_000913.3 4477307 4478311 R ornithine carbamoyltransferase 1 complement(4477307..4478311) Escherichia coli str. K-12 substr. MG1655 948774 b4255 CDS rraB NC_000913.3 4478473 4478889 D protein inhibitor of RNase E 4478473..4478889 Escherichia coli str. K-12 substr. MG1655 948773 b4256 CDS yjgM NC_000913.3 4479034 4479537 R putative acyltransferase; GNAT family putative N-acetyltransferase complement(4479034..4479537) Escherichia coli str. K-12 substr. MG1655 948772 b4257 CDS yjgN NC_000913.3 4479730 4480926 D DUF898 family inner membrane protein 4479730..4480926 Escherichia coli str. K-12 substr. MG1655 948784 b4258 CDS valS NC_000913.3 4480982 4483837 R valine tRNA synthetase; valyl-tRNA synthetase complement(4480982..4483837) Escherichia coli str. K-12 substr. MG1655 948785 b4259 CDS holC NC_000913.3 4483837 4484280 R DNA polymerase III, chi subunit complement(4483837..4484280) Escherichia coli str. K-12 substr. MG1655 948787 b4260 CDS pepA NC_000913.3 4484440 4485951 R aminopeptidase A/I; multifunctional aminopeptidase A: a cyteinylglycinase, transcription regulator and site-specific recombination factor complement(4484440..4485951) Escherichia coli str. K-12 substr. MG1655 948791 b4261 CDS lptF NC_000913.3 4486218 4487318 D lipopolysaccharide export ABC permease 4486218..4487318 Escherichia coli str. K-12 substr. MG1655 948795 b4262 CDS lptG NC_000913.3 4487318 4488400 D lipopolysaccharide export ABC permease 4487318..4488400 Escherichia coli str. K-12 substr. MG1655 945324 b4263 CDS yjgR NC_000913.3 4488561 4490063 R DUF853 family protein with NTPase fold complement(4488561..4490063) Escherichia coli str. K-12 substr. MG1655 948978 b4264 CDS idnR NC_000913.3 4490141 4491139 R transcriptional repressor, 5-gluconate-binding complement(4490141..4491139) Escherichia coli str. K-12 substr. MG1655 949058 b4265 CDS idnT NC_000913.3 4491206 4492525 R L-idonate and D-gluconate transporter complement(4491206..4492525) Escherichia coli str. K-12 substr. MG1655 948798 b4266 CDS idnO NC_000913.3 4492587 4493351 R 5-keto-D-gluconate-5-reductase complement(4492587..4493351) Escherichia coli str. K-12 substr. MG1655 947109 b4267 CDS idnD NC_000913.3 4493375 4494406 R L-idonate 5-dehydrogenase, NAD-binding complement(4493375..4494406) Escherichia coli str. K-12 substr. MG1655 944769 b4268 CDS idnK NC_000913.3 4494623 4495186 D D-gluconate kinase, thermosensitive 4494623..4495186 Escherichia coli str. K-12 substr. MG1655 946066 b4269 CDS ahr NC_000913.3 4495190 4496209 R putative oxidoreductase; broad specificity NADPH-dependent aldehyde reductase, Zn-containing complement(4495190..4496209) Escherichia coli str. K-12 substr. MG1655 948802 b4271 CDS intB NC_000913.3 4496675 4497940 D pseudogene, integrase homology;IS, phage, Tn; Phage-related functions and prophages; KpLE2 phage-like element; P4-like integrase; <NA> 4496675..4497940 Escherichia coli str. K-12 substr. MG1655 948782 b4272 CDS insC1 NC_000913.3 4498272 4498637 D IS2 repressor TnpA 4498272..4498637 Escherichia coli str. K-12 substr. MG1655 948781 b4273 CDS insD1 NC_000913.3 4498595 4499500 D IS2 transposase TnpB 4498595..4499500 Escherichia coli str. K-12 substr. MG1655 948779 b4575 CDS yjgX NC_000913.3 4499593 4500791 R pseudogene fragment; <NA> complement(join(4499593..4500534,4500534..4500791)) Escherichia coli str. K-12 substr. MG1655 4056033 b4277 CDS yjgZ NC_000913.3 4501260 4501589 D uncharacterized protein 4501260..4501589 Escherichia coli str. K-12 substr. MG1655 948804 b4278 CDS insG NC_000913.3 4502103 4503431 R IS4 transposase complement(4502103..4503431) Escherichia coli str. K-12 substr. MG1655 948805 b4279 CDS yjhB NC_000913.3 4504058 4505275 D putative transport protein; putative MFS transporter, membrane protein 4504058..4505275 Escherichia coli str. K-12 substr. MG1655 948807 b4280 CDS yjhC NC_000913.3 4505287 4506405 D putative dehydrogenase; GFO/IDH/MOCA family putative oxidoreductase. NAD(P)-dependent 4505287..4506405 Escherichia coli str. K-12 substr. MG1655 948808 b4655 CDS ythA NC_000913.3 4506448 4506573 D uncharacterized protein 4506448..4506573 Escherichia coli str. K-12 substr. MG1655 5625581 b4281 CDS yjhD NC_000913.3 4506626 4506856 R pseudogene, KpLE2 phage-like element; <NA> complement(4506626..4506856) Escherichia coli str. K-12 substr. MG1655 948809 b4282 CDS yjhE NC_000913.3 4506861 4507109 D pseudogene, KpLE2 phage-like element; <NA> 4506861..4507109 Escherichia coli str. K-12 substr. MG1655 948810 b4623 CDS insO NC_000913.3 4507197 4509793 D pseudogene, IS911 transposase B;IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related; <NA> join(4507197..4507451,4509009..4509479,4509479..4509793) Escherichia coli str. K-12 substr. MG1655 5061531 b4284 CDS insI1 NC_000913.3 4507466 4508617 R IS30 transposase complement(4507466..4508617) Escherichia coli str. K-12 substr. MG1655 948815 b4561 CDS insM NC_000913.3 4508676 4508942 R pseudogene, IS600 transposase;IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related; <NA> complement(4508676..4508942) Escherichia coli str. K-12 substr. MG1655 1450310 b4286 CDS yjhV NC_000913.3 4509804 4510133 D pseudogene, KpLE2 phage-like element; <NA> 4509804..4510133 Escherichia coli str. K-12 substr. MG1655 948818 b4287 CDS fecE NC_000913.3 4510690 4511457 R ATP-binding component of citrate-dependent iron(III) transport protein; ATP-binding component of ABC superfamily; ferric citrate ABC transporter ATPase complement(4510690..4511457) Escherichia coli str. K-12 substr. MG1655 948819 b4288 CDS fecD NC_000913.3 4511458 4512414 R citrate-dependent iron transport, membrane-bound protein; membrane component of ABC superfamily; ferric citrate ABC transporter permease complement(4511458..4512414) Escherichia coli str. K-12 substr. MG1655 946816 b4289 CDS fecC NC_000913.3 4512411 4513409 R citrate-dependent iron(III) transport protein, cytosolic; membrane component of ABC superfamily; ferric citrate ABC transporter permease complement(4512411..4513409) Escherichia coli str. K-12 substr. MG1655 948826 b4290 CDS fecB NC_000913.3 4513406 4514308 R citrate-dependent iron transport, periplasmic protein; periplasmic-binding component of ABC superfamily; ferric citrate ABC transporter periplasmic binding protein complement(4513406..4514308) Escherichia coli str. K-12 substr. MG1655 946838 b4291 CDS fecA NC_000913.3 4514353 4516677 R outer membrane receptor; citrate-dependent iron transport, outer membrane receptor; TonB-dependent outer membrane ferric citrate transporter and signal transducer; ferric citrate extracelluar receptor; FecR-interacting protein complement(4514353..4516677) Escherichia coli str. K-12 substr. MG1655 946427 b4292 CDS fecR NC_000913.3 4516764 4517717 R regulator for fec operon, periplasmic; anti-sigma transmembrane signal transducer for ferric citrate transport; periplasmic FecA-bound ferric citrate sensor and cytoplasmic FecI ECF sigma factor activator complement(4516764..4517717) Escherichia coli str. K-12 substr. MG1655 949104 b4293 CDS fecI NC_000913.3 4517714 4518235 R probable RNA polymerase sigma factor; RNA polymerase sigma-19 factor, fec operon-specific; ECF sigma factor complement(4517714..4518235) Escherichia coli str. K-12 substr. MG1655 946839 b4294 CDS insA NC_000913.3 4518527 4518802 D IS1 repressor TnpA 4518527..4518802 Escherichia coli str. K-12 substr. MG1655 948830 b4576 CDS insB1 NC_000913.3 4518721 4519224 D IS1 transposase B;IS, phage, Tn; Transposon-related functions; extrachromosomal; transposon related; <NA> 4518721..4519224 Escherichia coli str. K-12 substr. MG1655 4056034 b4295 CDS yjhU NC_000913.3 4519338 4520324 R putative DNA-binding transcriptional regulator; KpLE2 phage-like element complement(4519338..4520324) Escherichia coli str. K-12 substr. MG1655 948827 b4296 CDS yjhF NC_000913.3 4520671 4522020 R putative transport system permease; putative transporter complement(4520671..4522020) Escherichia coli str. K-12 substr. MG1655 949102 b4297 CDS yjhG NC_000913.3 4522127 4524094 R putative dehydratase complement(4522127..4524094) Escherichia coli str. K-12 substr. MG1655 946829 b4298 CDS yjhH NC_000913.3 4524105 4525010 R putative lyase/synthase complement(4524105..4525010) Escherichia coli str. K-12 substr. MG1655 948825 b4299 CDS yjhI NC_000913.3 4525015 4525803 R putative regulator; putative DNA-binding transcriptional regulator complement(4525015..4525803) Escherichia coli str. K-12 substr. MG1655 949100 b4300 CDS sgcR NC_000913.3 4526106 4526888 R putative DEOR-type transcriptional regulator; putative DNA-binding transcriptional regulator complement(4526106..4526888) Escherichia coli str. K-12 substr. MG1655 946830 b4301 CDS sgcE NC_000913.3 4526905 4527537 R putative epimerase complement(4526905..4527537) Escherichia coli str. K-12 substr. MG1655 948829 b4302 CDS sgcA NC_000913.3 4527549 4527980 R putative PTS system enzyme II A component; putative phosphotransferase enzyme IIA component complement(4527549..4527980) Escherichia coli str. K-12 substr. MG1655 948831 b4303 CDS sgcQ NC_000913.3 4528111 4528917 R putative nucleoside triphosphatase complement(4528111..4528917) Escherichia coli str. K-12 substr. MG1655 948834 b4304 CDS sgcC NC_000913.3 4528930 4530243 R putative PTS system enzyme IIC component; putative PTS system EIIC permease component complement(4528930..4530243) Escherichia coli str. K-12 substr. MG1655 946849 b4565 CDS sgcB NC_000913.3 4530255 4530533 R putative enzyme IIB component of PTS complement(4530255..4530533) Escherichia coli str. K-12 substr. MG1655 1450295 b4305 CDS sgcX NC_000913.3 4530530 4531651 R putative lyase/synthase; putative endoglucanase with Zn-dependent exopeptidase domain complement(4530530..4531651) Escherichia coli str. K-12 substr. MG1655 948840 b4656 CDS yjhY NC_000913.3 4532050 4532310 R pseudogene, zinc finger protein family; <NA> complement(4532050..4532310) Escherichia coli str. K-12 substr. MG1655 5625582 b4306 CDS yjhP NC_000913.3 4532437 4533183 R putative methyltransferase complement(4532437..4533183) Escherichia coli str. K-12 substr. MG1655 946851 b4307 CDS yjhQ NC_000913.3 4533239 4533784 R GNAT family putative N-acetyltransferase complement(4533239..4533784) Escherichia coli str. K-12 substr. MG1655 949059 b4566 CDS yjhX NC_000913.3 4533796 4534053 R UPF0386 family protein complement(4533796..4534053) Escherichia coli str. K-12 substr. MG1655 1450297 b4657 CDS yjhZ NC_000913.3 4534430 4534675 R pseudogene, rimK paralog, C-terminal fragment; <NA> complement(4534430..4534675) Escherichia coli str. K-12 substr. MG1655 5625583 b4308 CDS yjhR NC_000913.3 4534791 4536031 D pseudogene, helicase family; putative frameshift suppressor; <NA> join(4534791..4535003,4535003..4536031) Escherichia coli str. K-12 substr. MG1655 944740 b4309 CDS nanS NC_000913.3 4536614 4537594 R 9-O-acetyl N-acetylneuraminic acid esterase complement(4536614..4537594) Escherichia coli str. K-12 substr. MG1655 948835 b4310 CDS nanM NC_000913.3 4537659 4538765 R N-acetylneuraminic acid mutarotase complement(4537659..4538765) Escherichia coli str. K-12 substr. MG1655 949106 b4311 CDS nanC NC_000913.3 4538785 4539501 R N-acetylnuraminic acid outer membrane channel protein complement(4538785..4539501) Escherichia coli str. K-12 substr. MG1655 946843 b4312 CDS fimB NC_000913.3 4540957 4541559 D recombinase involved in phase variation; regulator for fimA; tyrosine recombinase/inversion of on/off regulator of fimA 4540957..4541559 Escherichia coli str. K-12 substr. MG1655 948832 b4313 CDS fimE NC_000913.3 4542037 4542633 D recombinase involved in phase variation; regulator for fimA; tyrosine recombinase/inversion of on/off regulator of fimA 4542037..4542633 Escherichia coli str. K-12 substr. MG1655 948836 b4314 CDS fimA NC_000913.3 4543115 4543663 D major type 1 subunit fimbrin (pilin) 4543115..4543663 Escherichia coli str. K-12 substr. MG1655 948838 b4315 CDS fimI NC_000913.3 4543728 4544267 D fimbrial protein; fimbrial protein involved in type 1 pilus biosynthesis 4543728..4544267 Escherichia coli str. K-12 substr. MG1655 948841 b4316 CDS fimC NC_000913.3 4544304 4545029 D periplasmic chaperone, required for type 1 fimbriae; periplasmic chaperone 4544304..4545029 Escherichia coli str. K-12 substr. MG1655 948843 b4317 CDS fimD NC_000913.3 4545096 4547732 D outer membrane protein; export and assembly of type 1 fimbriae, interrupted; fimbrial usher outer membrane porin protein; FimCD chaperone-usher 4545096..4547732 Escherichia coli str. K-12 substr. MG1655 948844 b4318 CDS fimF NC_000913.3 4547742 4548272 D fimbrial morphology; minor component of type 1 fimbriae 4547742..4548272 Escherichia coli str. K-12 substr. MG1655 948845 b4319 CDS fimG NC_000913.3 4548285 4548788 D fimbrial morphology; minor component of type 1 fimbriae 4548285..4548788 Escherichia coli str. K-12 substr. MG1655 948846 b4320 CDS fimH NC_000913.3 4548808 4549710 D minor fimbrial subunit, D-mannose specific adhesin; minor component of type 1 fimbriae 4548808..4549710 Escherichia coli str. K-12 substr. MG1655 948847 b4321 CDS gntP NC_000913.3 4549953 4551296 R gluconate transport system permease 3; fructuronate transporter complement(4549953..4551296) Escherichia coli str. K-12 substr. MG1655 948848 b4322 CDS uxuA NC_000913.3 4551636 4552820 D mannonate hydrolase 4551636..4552820 Escherichia coli str. K-12 substr. MG1655 947082 b4323 CDS uxuB NC_000913.3 4552901 4554361 D D-mannonate oxidoreductase; D-mannonate oxidoreductase, NAD-dependent 4552901..4554361 Escherichia coli str. K-12 substr. MG1655 946795 b4324 CDS uxuR NC_000913.3 4554576 4555349 D regulator for uxu operon; fructuronate-inducible hexuronate regulon transcriptional repressor; autorepressor 4554576..4555349 Escherichia coli str. K-12 substr. MG1655 948849 b4325 CDS yjiC NC_000913.3 4555490 4556320 R uncharacterized protein complement(4555490..4556320) Escherichia coli str. K-12 substr. MG1655 948850 b4326 CDS iraD NC_000913.3 4556993 4557385 D RpoS stabilzer after DNA damage, anti-RssB factor 4556993..4557385 Escherichia coli str. K-12 substr. MG1655 948851 b4327 CDS hypT NC_000913.3 4557378 4558289 R putative transcriptional regulator LYSR-type; hypochlorite-responsive transcription factor complement(4557378..4558289) Escherichia coli str. K-12 substr. MG1655 948852 b4328 CDS iadA NC_000913.3 4558354 4559526 R isoaspartyl dipeptidase complement(4558354..4559526) Escherichia coli str. K-12 substr. MG1655 948853 b4329 CDS yjiG NC_000913.3 4559539 4560000 R SpmB family inner membrane protein complement(4559539..4560000) Escherichia coli str. K-12 substr. MG1655 948854 b4330 CDS yjiH NC_000913.3 4559997 4560680 R nucleoside recognition pore and gate family putative inner membrane transporter complement(4559997..4560680) Escherichia coli str. K-12 substr. MG1655 948856 b4331 CDS kptA NC_000913.3 4560930 4561484 D RNA 2'-phosphotransferase 4560930..4561484 Escherichia coli str. K-12 substr. MG1655 948858 b4332 CDS yjiJ NC_000913.3 4561497 4562675 R putative transport protein; DUF1228 family putative inner membrane MFS superfamily transporter complement(4561497..4562675) Escherichia coli str. K-12 substr. MG1655 948859 b4333 CDS yjiK NC_000913.3 4562743 4563603 R SdiA-regulated family putative membrane-anchored protein; putative phytase-like esterase complement(4562743..4563603) Escherichia coli str. K-12 substr. MG1655 948957 b4334 CDS yjiL NC_000913.3 4563922 4564689 R putative enzyme; putative ATPase, activator of (R)-hydroxyglutaryl-CoA dehydratase complement(4563922..4564689) Escherichia coli str. K-12 substr. MG1655 948837 b4335 CDS yjiM NC_000913.3 4564699 4565850 R putative 2-hydroxyglutaryl-CoA dehydratase complement(4564699..4565850) Escherichia coli str. K-12 substr. MG1655 945789 b4336 CDS yjiN NC_000913.3 4565966 4567246 R zinc-type alcohol dehydrogenase-like protein complement(4565966..4567246) Escherichia coli str. K-12 substr. MG1655 948860 b4337 CDS mdtM NC_000913.3 4567287 4568519 R putative transport protein; multidrug efflux system protein complement(4567287..4568519) Escherichia coli str. K-12 substr. MG1655 948861 b4339 CDS yjiP NC_000913.3 4568998 4569918 D pseudogene, transposase_31 family protein; <NA> 4568998..4569918 Escherichia coli str. K-12 substr. MG1655 948866 b4340 CDS yjiR NC_000913.3 4570162 4571574 R putative regulator; putative DNA-binding transcriptional regulator/putative aminotransferase complement(4570162..4571574) Escherichia coli str. K-12 substr. MG1655 949089 b4341 CDS yjiS NC_000913.3 4571751 4571915 D DUF1127 family protein 4571751..4571915 Escherichia coli str. K-12 substr. MG1655 948903 b4342 CDS yjiT NC_000913.3 4572414 4573916 D pseudogene; <NA> 4572414..4573916 Escherichia coli str. K-12 substr. MG1655 945056 b4486 CDS yjiV NC_000913.3 4573919 4576855 D pseudogene; conserved hypothetical protein; <NA> 4573919..4576855 Escherichia coli str. K-12 substr. MG1655 2847669 b4345 CDS mcrC NC_000913.3 4576912 4577958 R component of McrBC 5-methylcytosine restriction system, expands range of sequences restricted; 5-methylcytosine-specific restriction enzyme McrBC, subunit McrC complement(4576912..4577958) Escherichia coli str. K-12 substr. MG1655 948880 b4346 CDS mcrB NC_000913.3 4577958 4579337 R component of McrBC 5-methylcytosine restriction system; 5-methylcytosine-specific restriction enzyme McrBC, subunit McrB complement(4577958..4579337) Escherichia coli str. K-12 substr. MG1655 949122 b4347 CDS symE NC_000913.3 4579499 4579840 R toxic peptide regulated by antisense sRNA symR complement(4579499..4579840) Escherichia coli str. K-12 substr. MG1655 949088 b4348 CDS hsdS NC_000913.3 4580068 4581462 R specificity determinant for hsdM and hsdR complement(4580068..4581462) Escherichia coli str. K-12 substr. MG1655 948867 b4349 CDS hsdM NC_000913.3 4581459 4583048 R host modification; DNA methylase M; DNA methyltransferase M complement(4581459..4583048) Escherichia coli str. K-12 substr. MG1655 948872 b4350 CDS hsdR NC_000913.3 4583249 4586761 R host restriction; endonuclease R; endonuclease R Type I restriction enzyme complement(4583249..4586761) Escherichia coli str. K-12 substr. MG1655 948878 b4351 CDS mrr NC_000913.3 4586949 4587863 D restriction of methylated adenine; methylated adenine and cytosine restriction protein 4586949..4587863 Escherichia coli str. K-12 substr. MG1655 948898 b4352 CDS yjiA NC_000913.3 4587909 4588865 R metal-binding GTPase complement(4587909..4588865) Escherichia coli str. K-12 substr. MG1655 948882 b4353 CDS yjiX NC_000913.3 4588876 4589079 R DUF466 family protein complement(4588876..4589079) Escherichia coli str. K-12 substr. MG1655 949090 b4354 CDS yjiY NC_000913.3 4589129 4591279 R putative carbon starvation protein; putative transporter complement(4589129..4591279) Escherichia coli str. K-12 substr. MG1655 948914 b4355 CDS tsr NC_000913.3 4591657 4593312 D methyl-accepting chemotaxis protein I, serine sensor receptor 4591657..4593312 Escherichia coli str. K-12 substr. MG1655 948884 b4356 CDS lgoT NC_000913.3 4593361 4594722 R putative transport protein, cryptic, orf, joins former yjiZ and yjjL; putative L-galactonate:H+ symporter complement(4593361..4594722) Escherichia coli str. K-12 substr. MG1655 948879 b4357 CDS lgoR NC_000913.3 4594937 4595851 R putative transcriptional activator for L-galactonate catabolism complement(4594937..4595851) Escherichia coli str. K-12 substr. MG1655 948881 b4358 CDS lgoD NC_000913.3 4595990 4597012 D putative oxidoreductase; L-galactonate oxidoreductase; L-gulonate oxidoreductase 4595990..4597012 Escherichia coli str. K-12 substr. MG1655 948883 b4359 CDS opgB NC_000913.3 4597150 4599441 R OPG periplasmic biosynthetic phosphoglycerol transferases I (membrane-bound) and II (soluble) complement(4597150..4599441) Escherichia coli str. K-12 substr. MG1655 948888 b4360 CDS yjjA NC_000913.3 4599695 4600189 R putative glycoprotein/receptor; putative DUF2501 family periplasmic protein complement(4599695..4600189) Escherichia coli str. K-12 substr. MG1655 948887 b4361 CDS dnaC NC_000913.3 4600238 4600975 R chromosome replication; initiation and chain elongation; DNA biosynthesis protein complement(4600238..4600975) Escherichia coli str. K-12 substr. MG1655 948864 b4362 CDS dnaT NC_000913.3 4600978 4601517 R DNA biosynthesis; primosomal protein i; DNA biosynthesis protein (primosomal protein I) complement(4600978..4601517) Escherichia coli str. K-12 substr. MG1655 948813 b4363 CDS yjjB NC_000913.3 4601624 4602097 R DUF3815 family inner membrane protein complement(4601624..4602097) Escherichia coli str. K-12 substr. MG1655 948811 b4364 CDS yjjP NC_000913.3 4602088 4602858 R putative structural protein; DUF1212 family inner membrane protein complement(4602088..4602858) Escherichia coli str. K-12 substr. MG1655 948812 b4365 CDS yjjQ NC_000913.3 4603477 4604202 D putative regulator; putative transcriptional regulator 4603477..4604202 Escherichia coli str. K-12 substr. MG1655 948896 b4366 CDS bglJ NC_000913.3 4604160 4604837 D 2-component transcriptional regulator; bgl operon transcriptional activator 4604160..4604837 Escherichia coli str. K-12 substr. MG1655 948889 b4367 CDS fhuF NC_000913.3 4604875 4605663 R ferric iron reductase involved in ferric hydroximate transport complement(4604875..4605663) Escherichia coli str. K-12 substr. MG1655 948891 b4567 CDS yjjZ NC_000913.3 4605804 4606040 D uncharacterized protein 4605804..4606040 Escherichia coli str. K-12 substr. MG1655 1450313 b4371 CDS rsmC NC_000913.3 4606669 4607700 R 16S rRNA m(2)G1207 methyltransferase, SAM-dependent complement(4606669..4607700) Escherichia coli str. K-12 substr. MG1655 948892 b4372 CDS holD NC_000913.3 4607803 4608216 D DNA polymerase III, psi subunit 4607803..4608216 Escherichia coli str. K-12 substr. MG1655 948890 b4373 CDS rimI NC_000913.3 4608185 4608631 D acyltransferase for 30S ribosomal subunit protein S18; acetylation of N-terminal alanine; ribosomal-protein-S18-alanine N-acetyltransferase 4608185..4608631 Escherichia coli str. K-12 substr. MG1655 948894 b4374 CDS yjjG NC_000913.3 4608646 4609323 D putative phosphatase; dUMP phosphatase 4608646..4609323 Escherichia coli str. K-12 substr. MG1655 948899 b4375 CDS prfC NC_000913.3 4609414 4611003 D peptide chain release factor RF-3 4609414..4611003 Escherichia coli str. K-12 substr. MG1655 948897 b4376 CDS osmY NC_000913.3 4611396 4612001 D hyperosmotically inducible periplasmic protein; salt-inducible putative ABC transporter periplasmic binding protein 4611396..4612001 Escherichia coli str. K-12 substr. MG1655 948895 b4568 CDS ytjA NC_000913.3 4612128 4612289 D uncharacterized protein 4612128..4612289 Escherichia coli str. K-12 substr. MG1655 1450298 b4377 CDS yjjU NC_000913.3 4612411 4613484 D putative patatin-like family phospholipase 4612411..4613484 Escherichia coli str. K-12 substr. MG1655 948906 b4378 CDS yjjV NC_000913.3 4613481 4614260 D putative DNase 4613481..4614260 Escherichia coli str. K-12 substr. MG1655 2847741 b4379 CDS yjjW NC_000913.3 4614680 4615543 R putative activating enzyme; putative pyruvate formate lyase activating enzyme complement(4614680..4615543) Escherichia coli str. K-12 substr. MG1655 948905 b4380 CDS yjjI NC_000913.3 4615515 4617065 R DUF3029 family protein, putative glycine radical enzyme complement(4615515..4617065) Escherichia coli str. K-12 substr. MG1655 948904 b4381 CDS deoC NC_000913.3 4617323 4618102 D 2-deoxyribose-5-phosphate aldolase; 2-deoxyribose-5-phosphate aldolase, NAD(P)-linked 4617323..4618102 Escherichia coli str. K-12 substr. MG1655 948902 b4382 CDS deoA NC_000913.3 4618229 4619551 D thymidine phosphorylase 4618229..4619551 Escherichia coli str. K-12 substr. MG1655 948901 b4383 CDS deoB NC_000913.3 4619603 4620826 D phosphopentomutase 4619603..4620826 Escherichia coli str. K-12 substr. MG1655 948910 b4384 CDS deoD NC_000913.3 4620883 4621602 D purine nucleoside phosphorylase 1; nicotinamide 1-beta-D-riboside phosphorylase 4620883..4621602 Escherichia coli str. K-12 substr. MG1655 945654 b4385 CDS yjjJ NC_000913.3 4621769 4623100 D putative protein kinase 4621769..4623100 Escherichia coli str. K-12 substr. MG1655 944883 b4386 CDS lplA NC_000913.3 4623101 4624117 R lipoate-protein ligase A complement(4623101..4624117) Escherichia coli str. K-12 substr. MG1655 944865 b4387 CDS ytjB NC_000913.3 4624145 4624789 R SMP_2 family putative membrane-anchored periplasmic protein complement(4624145..4624789) Escherichia coli str. K-12 substr. MG1655 946089 b4388 CDS serB NC_000913.3 4624895 4625863 D 3-phosphoserine phosphatase 4624895..4625863 Escherichia coli str. K-12 substr. MG1655 948913 b4389 CDS radA NC_000913.3 4625912 4627294 D probable ATP-dependent protease; DNA repair protein 4625912..4627294 Escherichia coli str. K-12 substr. MG1655 948912 b4390 CDS nadR NC_000913.3 4627315 4628547 D probable nadAB transcriptional regulator; trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor 4627315..4628547 Escherichia coli str. K-12 substr. MG1655 948911 b4391 CDS ettA NC_000913.3 4628855 4630522 R putative ATP-binding component of a transport system; energy-dependent translational throttle A complement(4628855..4630522) Escherichia coli str. K-12 substr. MG1655 948909 b4392 CDS slt NC_000913.3 4630733 4632670 D soluble lytic murein transglycosylase; lytic murein transglycosylase, soluble 4630733..4632670 Escherichia coli str. K-12 substr. MG1655 948908 b4393 CDS trpR NC_000913.3 4632760 4633086 D regulator for trp operon and aroH; trp aporepressor; transcriptional repressor, tryptophan-binding 4632760..4633086 Escherichia coli str. K-12 substr. MG1655 948917 b4394 CDS yjjX NC_000913.3 4633233 4633745 R non-canonical purine NTP phosphatase, ITPase/XTPase complement(4633233..4633745) Escherichia coli str. K-12 substr. MG1655 948919 b4395 CDS ytjC NC_000913.3 4633797 4634444 D phosphoglyceromutase 2; phosphatase 4633797..4634444 Escherichia coli str. K-12 substr. MG1655 948918 b4396 CDS rob NC_000913.3 4634441 4635310 R right origin-binding protein; right oriC-binding transcriptional activator, AraC family complement(4634441..4635310) Escherichia coli str. K-12 substr. MG1655 948916 b4397 CDS creA NC_000913.3 4635521 4635994 D putative periplasmic protein 4635521..4635994 Escherichia coli str. K-12 substr. MG1655 948920 b4398 CDS creB NC_000913.3 4636007 4636696 D catabolic regulation response regulator; response regulator in two-component regulatory system with CreC 4636007..4636696 Escherichia coli str. K-12 substr. MG1655 948922 b4399 CDS creC NC_000913.3 4636696 4638120 D catabolite repression sensor kinase for PhoB; alternative sensor for pho regulon; sensory histidine kinase in two-component regulatory system with CreB or PhoB 4636696..4638120 Escherichia coli str. K-12 substr. MG1655 948609 b4400 CDS creD NC_000913.3 4638178 4639530 D tolerance to colicin E2; inner membrane protein 4638178..4639530 Escherichia coli str. K-12 substr. MG1655 948868 b4401 CDS arcA NC_000913.3 4639590 4640306 R negative response regulator of genes in aerobic pathways, (sensors, ArcB and CpxA); response regulator in two-component regulatory system with ArcB or CpxA complement(4639590..4640306) Escherichia coli str. K-12 substr. MG1655 948874 b4402 CDS yjjY NC_000913.3 4640402 4640542 D uncharacterized protein 4640402..4640542 Escherichia coli str. K-12 substr. MG1655 948925 b4403 CDS yjtD NC_000913.3 4640942 4641628 D putative methyltransferase 4640942..4641628 Escherichia coli str. K-12 substr. MG1655 948924 b0202 tRNA ileV NC_000913.3 225381 225457 D tRNA-Ile 225381..225457 Escherichia coli str. K-12 substr. MG1655 944884 b0203 tRNA alaV NC_000913.3 225500 225575 D tRNA-Ala 225500..225575 Escherichia coli str. K-12 substr. MG1655 944890 b0206 tRNA aspU NC_000913.3 228928 229004 D tRNA-Asp 228928..229004 Escherichia coli str. K-12 substr. MG1655 944880 b0216 tRNA aspV NC_000913.3 236931 237007 D tRNA-Asp 236931..237007 Escherichia coli str. K-12 substr. MG1655 947541 b0244 tRNA thrW NC_000913.3 262871 262946 D tRNA-Thr 262871..262946 Escherichia coli str. K-12 substr. MG1655 947202 b4629 tRNA ptwF NC_000913.3 297206 297254 D tRNA-OTHER 297206..297254 Escherichia coli str. K-12 substr. MG1655 5625555 b0536 tRNA argU NC_000913.3 564723 564799 D tRNA-Arg 564723..564799 Escherichia coli str. K-12 substr. MG1655 945161 b4635 tRNA pauD NC_000913.3 586057 586101 D tRNA-OTHER 586057..586101 Escherichia coli str. K-12 substr. MG1655 5625561 b0664 tRNA glnX NC_000913.3 696430 696504 R tRNA-Gln complement(696430..696504) Escherichia coli str. K-12 substr. MG1655 945257 b0665 tRNA glnV NC_000913.3 696542 696616 R tRNA-Gln complement(696542..696616) Escherichia coli str. K-12 substr. MG1655 945255 b0666 tRNA metU NC_000913.3 696664 696740 R tRNA-Met complement(696664..696740) Escherichia coli str. K-12 substr. MG1655 945262 b0668 tRNA glnW NC_000913.3 696756 696830 R tRNA-Gln complement(696756..696830) Escherichia coli str. K-12 substr. MG1655 945750 b0670 tRNA glnU NC_000913.3 696865 696939 R tRNA-Gln complement(696865..696939) Escherichia coli str. K-12 substr. MG1655 945269 b0672 tRNA leuW NC_000913.3 696963 697047 R tRNA-Leu complement(696963..697047) Escherichia coli str. K-12 substr. MG1655 945264 b0673 tRNA metT NC_000913.3 697057 697133 R tRNA-Met complement(697057..697133) Escherichia coli str. K-12 substr. MG1655 945280 b0743 tRNA lysT NC_000913.3 780554 780629 D tRNA-Lys 780554..780629 Escherichia coli str. K-12 substr. MG1655 945336 b0744 tRNA valT NC_000913.3 780765 780840 D tRNA-Val 780765..780840 Escherichia coli str. K-12 substr. MG1655 945331 b0745 tRNA lysW NC_000913.3 780843 780918 D tRNA-Lys 780843..780918 Escherichia coli str. K-12 substr. MG1655 945338 b0746 tRNA valZ NC_000913.3 781068 781143 D tRNA-Val 781068..781143 Escherichia coli str. K-12 substr. MG1655 945345 b0747 tRNA lysY NC_000913.3 781147 781222 D tRNA-Lys 781147..781222 Escherichia coli str. K-12 substr. MG1655 945342 b0748 tRNA lysZ NC_000913.3 781369 781444 D tRNA-Lys 781369..781444 Escherichia coli str. K-12 substr. MG1655 945352 b0749 tRNA lysQ NC_000913.3 781577 781652 D tRNA-Lys 781577..781652 Escherichia coli str. K-12 substr. MG1655 945353 b0883 tRNA serW NC_000913.3 925884 925971 R tRNA-Ser complement(925884..925971) Escherichia coli str. K-12 substr. MG1655 945501 b0971 tRNA serT NC_000913.3 1031625 1031712 R tRNA-Ser complement(1031625..1031712) Escherichia coli str. K-12 substr. MG1655 944826 b1032 tRNA serX NC_000913.3 1097565 1097652 R tRNA-Ser complement(1097565..1097652) Escherichia coli str. K-12 substr. MG1655 945714 b1230 tRNA tyrV NC_000913.3 1287244 1287328 R tRNA-Tyr complement(1287244..1287328) Escherichia coli str. K-12 substr. MG1655 945811 b1231 tRNA tyrT NC_000913.3 1287538 1287622 R tRNA-Tyr complement(1287538..1287622) Escherichia coli str. K-12 substr. MG1655 945820 b1665 tRNA valV NC_000913.3 1746435 1746511 D tRNA-Val 1746435..1746511 Escherichia coli str. K-12 substr. MG1655 946170 b1666 tRNA valW NC_000913.3 1746516 1746592 D tRNA-Val 1746516..1746592 Escherichia coli str. K-12 substr. MG1655 949069 b1909 tRNA leuZ NC_000913.3 1991815 1991901 R tRNA-Leu complement(1991815..1991901) Escherichia coli str. K-12 substr. MG1655 945662 b1910 tRNA cysT NC_000913.3 1991914 1991987 R tRNA-Cys complement(1991914..1991987) Escherichia coli str. K-12 substr. MG1655 946414 b1911 tRNA glyW NC_000913.3 1992042 1992117 R tRNA-Gly complement(1992042..1992117) Escherichia coli str. K-12 substr. MG1655 946416 b1975 tRNA serU NC_000913.3 2043468 2043557 R tRNA-Ser complement(2043468..2043557) Escherichia coli str. K-12 substr. MG1655 946492 b1977 tRNA asnT NC_000913.3 2044549 2044624 D tRNA-Asn 2044549..2044624 Escherichia coli str. K-12 substr. MG1655 946488 b1984 tRNA asnW NC_000913.3 2058027 2058102 R tRNA-Asn complement(2058027..2058102) Escherichia coli str. K-12 substr. MG1655 946494 b1986 tRNA asnU NC_000913.3 2059851 2059926 D tRNA-Asn 2059851..2059926 Escherichia coli str. K-12 substr. MG1655 946503 b1989 tRNA asnV NC_000913.3 2062260 2062335 D tRNA-Asn 2062260..2062335 Escherichia coli str. K-12 substr. MG1655 946509 b2189 tRNA proL NC_000913.3 2286211 2286287 D tRNA-Pro 2286211..2286287 Escherichia coli str. K-12 substr. MG1655 946320 b2348 tRNA argW NC_000913.3 2466309 2466383 D tRNA-Arg 2466309..2466383 Escherichia coli str. K-12 substr. MG1655 945486 b4643 tRNA pawZ NC_000913.3 2476584 2476598 D tRNA-OTHER 2476584..2476598 Escherichia coli str. K-12 substr. MG1655 5625569 b2396 tRNA alaX NC_000913.3 2518041 2518116 R tRNA-Ala complement(2518041..2518116) Escherichia coli str. K-12 substr. MG1655 946859 b2397 tRNA alaW NC_000913.3 2518156 2518231 R tRNA-Ala complement(2518156..2518231) Escherichia coli str. K-12 substr. MG1655 946860 b2401 tRNA valU NC_000913.3 2520931 2521006 D tRNA-Val 2520931..2521006 Escherichia coli str. K-12 substr. MG1655 946824 b2402 tRNA valX NC_000913.3 2521051 2521126 D tRNA-Val 2521051..2521126 Escherichia coli str. K-12 substr. MG1655 946817 b2403 tRNA valY NC_000913.3 2521173 2521248 D tRNA-Val 2521173..2521248 Escherichia coli str. K-12 substr. MG1655 946870 b2404 tRNA lysV NC_000913.3 2521253 2521328 D tRNA-Lys 2521253..2521328 Escherichia coli str. K-12 substr. MG1655 946866 b2590 tRNA gltW NC_000913.3 2729369 2729444 R tRNA-Glu complement(2729369..2729444) Escherichia coli str. K-12 substr. MG1655 947076 b2652 tRNA ileY NC_000913.3 2785762 2785837 R tRNA-Ile complement(2785762..2785837) Escherichia coli str. K-12 substr. MG1655 947163 b2691 tRNA argQ NC_000913.3 2817784 2817860 R tRNA-Arg complement(2817784..2817860) Escherichia coli str. K-12 substr. MG1655 947150 b2692 tRNA argZ NC_000913.3 2818059 2818135 R tRNA-Arg complement(2818059..2818135) Escherichia coli str. K-12 substr. MG1655 947171 b2693 tRNA argY NC_000913.3 2818198 2818274 R tRNA-Arg complement(2818198..2818274) Escherichia coli str. K-12 substr. MG1655 946596 b2694 tRNA argV NC_000913.3 2818473 2818549 R tRNA-Arg complement(2818473..2818549) Escherichia coli str. K-12 substr. MG1655 947209 b2695 tRNA serV NC_000913.3 2818553 2818645 R tRNA-Ser complement(2818553..2818645) Escherichia coli str. K-12 substr. MG1655 947173 b2814 tRNA metZ NC_000913.3 2947387 2947463 D tRNA-Met 2947387..2947463 Escherichia coli str. K-12 substr. MG1655 947198 b2815 tRNA metW NC_000913.3 2947497 2947573 D tRNA-Met 2947497..2947573 Escherichia coli str. K-12 substr. MG1655 947292 b2816 tRNA metV NC_000913.3 2947607 2947683 D tRNA-Met 2947607..2947683 Escherichia coli str. K-12 substr. MG1655 946037 b2864 tRNA glyU NC_000913.3 2998984 2999057 R tRNA-Gly complement(2998984..2999057) Escherichia coli str. K-12 substr. MG1655 947343 b2967 tRNA pheV NC_000913.3 3110366 3110441 D tRNA-Phe 3110366..3110441 Escherichia coli str. K-12 substr. MG1655 947463 b3069 tRNA ileX NC_000913.3 3215598 3215673 D tRNA-Ile 3215598..3215673 Escherichia coli str. K-12 substr. MG1655 947558 b3171 tRNA metY NC_000913.3 3318213 3318289 R tRNA-Met complement(3318213..3318289) Escherichia coli str. K-12 substr. MG1655 947678 b3174 tRNA leuU NC_000913.3 3322072 3322158 R tRNA-Leu complement(3322072..3322158) Escherichia coli str. K-12 substr. MG1655 947505 b3273 tRNA thrV NC_000913.3 3423580 3423655 R tRNA-Thr complement(3423580..3423655) Escherichia coli str. K-12 substr. MG1655 947770 b3276 tRNA alaU NC_000913.3 3426958 3427033 R tRNA-Ala complement(3426958..3427033) Escherichia coli str. K-12 substr. MG1655 947772 b3277 tRNA ileU NC_000913.3 3427076 3427152 R tRNA-Ile complement(3427076..3427152) Escherichia coli str. K-12 substr. MG1655 947778 b3545 tRNA proK NC_000913.3 3708616 3708692 R tRNA-Pro complement(3708616..3708692) Escherichia coli str. K-12 substr. MG1655 948061 b3658 tRNA selC NC_000913.3 3836222 3836316 D tRNA-Sec 3836222..3836316 Escherichia coli str. K-12 substr. MG1655 948167 b3757 tRNA gltU NC_000913.3 3943435 3943510 D tRNA-Glu 3943435..3943510 Escherichia coli str. K-12 substr. MG1655 948271 b3760 tRNA aspT NC_000913.3 3946872 3946948 D tRNA-Asp 3946872..3946948 Escherichia coli str. K-12 substr. MG1655 948276 b3761 tRNA trpT NC_000913.3 3946957 3947032 D tRNA-Trp 3946957..3947032 Escherichia coli str. K-12 substr. MG1655 948275 b3796 tRNA argX NC_000913.3 3982375 3982451 D tRNA-Arg 3982375..3982451 Escherichia coli str. K-12 substr. MG1655 945107 b3797 tRNA hisR NC_000913.3 3982509 3982585 D tRNA-His 3982509..3982585 Escherichia coli str. K-12 substr. MG1655 948305 b3798 tRNA leuT NC_000913.3 3982606 3982692 D tRNA-Leu 3982606..3982692 Escherichia coli str. K-12 substr. MG1655 948304 b3799 tRNA proM NC_000913.3 3982735 3982811 D tRNA-Pro 3982735..3982811 Escherichia coli str. K-12 substr. MG1655 948303 b3852 tRNA ileT NC_000913.3 4037141 4037217 D tRNA-Ile 4037141..4037217 Escherichia coli str. K-12 substr. MG1655 948339 b3853 tRNA alaT NC_000913.3 4037260 4037335 D tRNA-Ala 4037260..4037335 Escherichia coli str. K-12 substr. MG1655 948337 b3969 tRNA gltT NC_000913.3 4168372 4168447 D tRNA-Glu 4168372..4168447 Escherichia coli str. K-12 substr. MG1655 948465 b3976 tRNA thrU NC_000913.3 4175388 4175463 D tRNA-Thr 4175388..4175463 Escherichia coli str. K-12 substr. MG1655 948476 b3977 tRNA tyrU NC_000913.3 4175472 4175556 D tRNA-Tyr 4175472..4175556 Escherichia coli str. K-12 substr. MG1655 948474 b3978 tRNA glyT NC_000913.3 4175673 4175747 D tRNA-Gly 4175673..4175747 Escherichia coli str. K-12 substr. MG1655 948481 b3979 tRNA thrT NC_000913.3 4175754 4175829 D tRNA-Thr 4175754..4175829 Escherichia coli str. K-12 substr. MG1655 948480 b4008 tRNA gltV NC_000913.3 4209774 4209849 D tRNA-Glu 4209774..4209849 Escherichia coli str. K-12 substr. MG1655 948510 b4134 tRNA pheU NC_000913.3 4362551 4362626 R tRNA-Phe complement(4362551..4362626) Escherichia coli str. K-12 substr. MG1655 948651 b4163 tRNA glyV NC_000913.3 4392360 4392435 D tRNA-Gly 4392360..4392435 Escherichia coli str. K-12 substr. MG1655 948682 b4164 tRNA glyX NC_000913.3 4392472 4392547 D tRNA-Gly 4392472..4392547 Escherichia coli str. K-12 substr. MG1655 948681 b4165 tRNA glyY NC_000913.3 4392583 4392658 D tRNA-Gly 4392583..4392658 Escherichia coli str. K-12 substr. MG1655 948687 b4270 tRNA leuX NC_000913.3 4496405 4496489 D tRNA-Leu 4496405..4496489 Escherichia coli str. K-12 substr. MG1655 948803 b4368 tRNA leuV NC_000913.3 4606079 4606165 R tRNA-Leu complement(4606079..4606165) Escherichia coli str. K-12 substr. MG1655 948873 b4369 tRNA leuP NC_000913.3 4606200 4606286 R tRNA-Leu complement(4606200..4606286) Escherichia coli str. K-12 substr. MG1655 948875 b4370 tRNA leuQ NC_000913.3 4606315 4606401 R tRNA-Leu complement(4606315..4606401) Escherichia coli str. K-12 substr. MG1655 948893 b0201 rRNA rrsH NC_000913.3 223771 225312 D 16S ribosomal RNA of rrnH operon 223771..225312 Escherichia coli str. K-12 substr. MG1655 944897 b0204 rRNA rrlH NC_000913.3 225759 228662 D 23S ribosomal RNA of rrnH operon 225759..228662 Escherichia coli str. K-12 substr. MG1655 944900 b0205 rRNA rrfH NC_000913.3 228756 228875 D 5S ribosomal RNA of rrnH operon 228756..228875 Escherichia coli str. K-12 substr. MG1655 944898 b2588 rRNA rrfG NC_000913.3 2726069 2726188 R 5S ribosomal RNA of rrnG operon complement(2726069..2726188) Escherichia coli str. K-12 substr. MG1655 947070 b2589 rRNA rrlG NC_000913.3 2726281 2729184 R 23S ribosomal RNA of rrnG operon complement(2726281..2729184) Escherichia coli str. K-12 substr. MG1655 947585 b2591 rRNA rrsG NC_000913.3 2729616 2731157 R 16S ribosomal RNA of rrnG operon complement(2729616..2731157) Escherichia coli str. K-12 substr. MG1655 947071 b3272 rRNA rrfF NC_000913.3 3423423 3423542 R 5S ribosomal RNA of rrnD operon complement(3423423..3423542) Escherichia coli str. K-12 substr. MG1655 947771 b3274 rRNA rrfD NC_000913.3 3423668 3423787 R 5S ribosomal RNA of rrnD operon complement(3423668..3423787) Escherichia coli str. K-12 substr. MG1655 947769 b3275 rRNA rrlD NC_000913.3 3423880 3426783 R 23S ribosomal RNA of rrnD operon complement(3423880..3426783) Escherichia coli str. K-12 substr. MG1655 947773 b3278 rRNA rrsD NC_000913.3 3427221 3428762 R 16S ribosomal RNA of rrnD operon complement(3427221..3428762) Escherichia coli str. K-12 substr. MG1655 947777 b3756 rRNA rrsC NC_000913.3 3941808 3943349 D 16S ribosomal RNA of rrnC operon 3941808..3943349 Escherichia coli str. K-12 substr. MG1655 948270 b3758 rRNA rrlC NC_000913.3 3943704 3946607 D 23S ribosomal RNA of rrnC operon 3943704..3946607 Escherichia coli str. K-12 substr. MG1655 948268 b3759 rRNA rrfC NC_000913.3 3946700 3946819 D 5S ribosomal RNA of rrnC operon 3946700..3946819 Escherichia coli str. K-12 substr. MG1655 948273 b3851 rRNA rrsA NC_000913.3 4035531 4037072 D 16S ribosomal RNA of rrnA operon 4035531..4037072 Escherichia coli str. K-12 substr. MG1655 948332 b3854 rRNA rrlA NC_000913.3 4037519 4040423 D 23S ribosomal RNA of rrnA operon 4037519..4040423 Escherichia coli str. K-12 substr. MG1655 948341 b3855 rRNA rrfA NC_000913.3 4040517 4040636 D 5S ribosomal RNA of rrnA operon 4040517..4040636 Escherichia coli str. K-12 substr. MG1655 948345 b3968 rRNA rrsB NC_000913.3 4166659 4168200 D 16S ribosomal RNA of rrnB operon 4166659..4168200 Escherichia coli str. K-12 substr. MG1655 948466 b3970 rRNA rrlB NC_000913.3 4168641 4171544 D 23S ribosomal RNA of rrnB operon 4168641..4171544 Escherichia coli str. K-12 substr. MG1655 948473 b3971 rRNA rrfB NC_000913.3 4171637 4171756 D 5S ribosomal RNA of rrnB operon 4171637..4171756 Escherichia coli str. K-12 substr. MG1655 948471 b4007 rRNA rrsE NC_000913.3 4208147 4209688 D 16S ribosomal RNA of rrnE operon 4208147..4209688 Escherichia coli str. K-12 substr. MG1655 948511 b4009 rRNA rrlE NC_000913.3 4210043 4212946 D 23S ribosomal RNA of rrnE operon 4210043..4212946 Escherichia coli str. K-12 substr. MG1655 948509 b4010 rRNA rrfE NC_000913.3 4213040 4213159 D 5S ribosomal RNA of rrnE operon 4213040..4213159 Escherichia coli str. K-12 substr. MG1655 948516