-- dump date 20240506_002222 -- class Genbank::Contig -- table contig_comment -- id comment NC_014537.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP002100.1.REFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237REFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at theREFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ)REFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de)REFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)REFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANLREFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaeaREFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429REFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993REFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: JapanREFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot springREFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212REFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free livingREFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: HeterotrophREFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: AnaerobeREFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS 454/IlluminaREFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS 454/Illumina assembly :: Newbler v. 2.3REFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS 454/Illumina assembly :: Newbler v. 2.3 finishing_strategy :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS 454/Illumina assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02950REFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS 454/Illumina assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02950 Type Strain :: YesREFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS 454/Illumina assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02950 Type Strain :: Yes Greengenes ID :: 19003REFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS 454/Illumina assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02950 Type Strain :: Yes Greengenes ID :: 19003 Isolation Site :: Hot spring from Kanagawa, Ohwakudani, JapanREFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS 454/Illumina assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02950 Type Strain :: Yes Greengenes ID :: 19003 Isolation Site :: Hot spring from Kanagawa, Ohwakudani, Japan on 9/1993REFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS 454/Illumina assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02950 Type Strain :: Yes Greengenes ID :: 19003 Isolation Site :: Hot spring from Kanagawa, Ohwakudani, Japan on 9/1993 Cell Shape :: Rod-shapedREFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS 454/Illumina assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02950 Type Strain :: Yes Greengenes ID :: 19003 Isolation Site :: Hot spring from Kanagawa, Ohwakudani, Japan on 9/1993 Cell Shape :: Rod-shaped Motility :: NonmotileREFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS 454/Illumina assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02950 Type Strain :: Yes Greengenes ID :: 19003 Isolation Site :: Hot spring from Kanagawa, Ohwakudani, Japan on 9/1993 Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: HyperthermophileREFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS 454/Illumina assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02950 Type Strain :: Yes Greengenes ID :: 19003 Isolation Site :: Hot spring from Kanagawa, Ohwakudani, Japan on 9/1993 Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Hyperthermophile Temperature Optimum :: 90CREFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS 454/Illumina assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02950 Type Strain :: Yes Greengenes ID :: 19003 Isolation Site :: Hot spring from Kanagawa, Ohwakudani, Japan on 9/1993 Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Hyperthermophile Temperature Optimum :: 90C pH :: 4.0 - 4.5REFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS 454/Illumina assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02950 Type Strain :: Yes Greengenes ID :: 19003 Isolation Site :: Hot spring from Kanagawa, Ohwakudani, Japan on 9/1993 Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Hyperthermophile Temperature Optimum :: 90C pH :: 4.0 - 4.5 Gram Staining :: Gram-REFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS 454/Illumina assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02950 Type Strain :: Yes Greengenes ID :: 19003 Isolation Site :: Hot spring from Kanagawa, Ohwakudani, Japan on 9/1993 Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Hyperthermophile Temperature Optimum :: 90C pH :: 4.0 - 4.5 Gram Staining :: Gram- Diseases :: NoneREFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS 454/Illumina assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02950 Type Strain :: Yes Greengenes ID :: 19003 Isolation Site :: Hot spring from Kanagawa, Ohwakudani, Japan on 9/1993 Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Hyperthermophile Temperature Optimum :: 90C pH :: 4.0 - 4.5 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS 454/Illumina assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02950 Type Strain :: Yes Greengenes ID :: 19003 Isolation Site :: Hot spring from Kanagawa, Ohwakudani, Japan on 9/1993 Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Hyperthermophile Temperature Optimum :: 90C pH :: 4.0 - 4.5 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS 454/Illumina assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02950 Type Strain :: Yes Greengenes ID :: 19003 Isolation Site :: Hot spring from Kanagawa, Ohwakudani, Japan on 9/1993 Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Hyperthermophile Temperature Optimum :: 90C pH :: 4.0 - 4.5 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS 454/Illumina assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02950 Type Strain :: Yes Greengenes ID :: 19003 Isolation Site :: Hot spring from Kanagawa, Ohwakudani, Japan on 9/1993 Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Hyperthermophile Temperature Optimum :: 90C pH :: 4.0 - 4.5 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS 454/Illumina assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02950 Type Strain :: Yes Greengenes ID :: 19003 Isolation Site :: Hot spring from Kanagawa, Ohwakudani, Japan on 9/1993 Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Hyperthermophile Temperature Optimum :: 90C pH :: 4.0 - 4.5 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3REFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS 454/Illumina assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02950 Type Strain :: Yes Greengenes ID :: 19003 Isolation Site :: Hot spring from Kanagawa, Ohwakudani, Japan on 9/1993 Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Hyperthermophile Temperature Optimum :: 90C pH :: 4.0 - 4.5 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30xREFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS 454/Illumina assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02950 Type Strain :: Yes Greengenes ID :: 19003 Isolation Site :: Hot spring from Kanagawa, Ohwakudani, Japan on 9/1993 Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Hyperthermophile Temperature Optimum :: 90C pH :: 4.0 - 4.5 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/IlluminaREFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS 454/Illumina assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02950 Type Strain :: Yes Greengenes ID :: 19003 Isolation Site :: Hot spring from Kanagawa, Ohwakudani, Japan on 9/1993 Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Hyperthermophile Temperature Optimum :: 90C pH :: 4.0 - 4.5 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS 454/Illumina assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02950 Type Strain :: Yes Greengenes ID :: 19003 Isolation Site :: Hot spring from Kanagawa, Ohwakudani, Japan on 9/1993 Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Hyperthermophile Temperature Optimum :: 90C pH :: 4.0 - 4.5 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS 454/Illumina assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02950 Type Strain :: Yes Greengenes ID :: 19003 Isolation Site :: Hot spring from Kanagawa, Ohwakudani, Japan on 9/1993 Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Hyperthermophile Temperature Optimum :: 90C pH :: 4.0 - 4.5 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS 454/Illumina assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02950 Type Strain :: Yes Greengenes ID :: 19003 Isolation Site :: Hot spring from Kanagawa, Ohwakudani, Japan on 9/1993 Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Hyperthermophile Temperature Optimum :: 90C pH :: 4.0 - 4.5 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:18:56REFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS 454/Illumina assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02950 Type Strain :: Yes Greengenes ID :: 19003 Isolation Site :: Hot spring from Kanagawa, Ohwakudani, Japan on 9/1993 Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Hyperthermophile Temperature Optimum :: 90C pH :: 4.0 - 4.5 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:18:56 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS 454/Illumina assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02950 Type Strain :: Yes Greengenes ID :: 19003 Isolation Site :: Hot spring from Kanagawa, Ohwakudani, Japan on 9/1993 Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Hyperthermophile Temperature Optimum :: 90C pH :: 4.0 - 4.5 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:18:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS 454/Illumina assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02950 Type Strain :: Yes Greengenes ID :: 19003 Isolation Site :: Hot spring from Kanagawa, Ohwakudani, Japan on 9/1993 Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Hyperthermophile Temperature Optimum :: 90C pH :: 4.0 - 4.5 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:18:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS 454/Illumina assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02950 Type Strain :: Yes Greengenes ID :: 19003 Isolation Site :: Hot spring from Kanagawa, Ohwakudani, Japan on 9/1993 Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Hyperthermophile Temperature Optimum :: 90C pH :: 4.0 - 4.5 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:18:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS 454/Illumina assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02950 Type Strain :: Yes Greengenes ID :: 19003 Isolation Site :: Hot spring from Kanagawa, Ohwakudani, Japan on 9/1993 Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Hyperthermophile Temperature Optimum :: 90C pH :: 4.0 - 4.5 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:18:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5REFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS 454/Illumina assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02950 Type Strain :: Yes Greengenes ID :: 19003 Isolation Site :: Hot spring from Kanagawa, Ohwakudani, Japan on 9/1993 Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Hyperthermophile Temperature Optimum :: 90C pH :: 4.0 - 4.5 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:18:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS 454/Illumina assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02950 Type Strain :: Yes Greengenes ID :: 19003 Isolation Site :: Hot spring from Kanagawa, Ohwakudani, Japan on 9/1993 Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Hyperthermophile Temperature Optimum :: 90C pH :: 4.0 - 4.5 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:18:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,570REFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS 454/Illumina assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02950 Type Strain :: Yes Greengenes ID :: 19003 Isolation Site :: Hot spring from Kanagawa, Ohwakudani, Japan on 9/1993 Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Hyperthermophile Temperature Optimum :: 90C pH :: 4.0 - 4.5 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:18:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,570 CDSs (total) :: 2,520REFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS 454/Illumina assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02950 Type Strain :: Yes Greengenes ID :: 19003 Isolation Site :: Hot spring from Kanagawa, Ohwakudani, Japan on 9/1993 Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Hyperthermophile Temperature Optimum :: 90C pH :: 4.0 - 4.5 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:18:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,570 CDSs (total) :: 2,520 Genes (coding) :: 2,502REFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS 454/Illumina assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02950 Type Strain :: Yes Greengenes ID :: 19003 Isolation Site :: Hot spring from Kanagawa, Ohwakudani, Japan on 9/1993 Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Hyperthermophile Temperature Optimum :: 90C pH :: 4.0 - 4.5 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:18:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,570 CDSs (total) :: 2,520 Genes (coding) :: 2,502 CDSs (with protein) :: 2,502REFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS 454/Illumina assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02950 Type Strain :: Yes Greengenes ID :: 19003 Isolation Site :: Hot spring from Kanagawa, Ohwakudani, Japan on 9/1993 Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Hyperthermophile Temperature Optimum :: 90C pH :: 4.0 - 4.5 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:18:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,570 CDSs (total) :: 2,520 Genes (coding) :: 2,502 CDSs (with protein) :: 2,502 Genes (RNA) :: 50REFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS 454/Illumina assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02950 Type Strain :: Yes Greengenes ID :: 19003 Isolation Site :: Hot spring from Kanagawa, Ohwakudani, Japan on 9/1993 Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Hyperthermophile Temperature Optimum :: 90C pH :: 4.0 - 4.5 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:18:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,570 CDSs (total) :: 2,520 Genes (coding) :: 2,502 CDSs (with protein) :: 2,502 Genes (RNA) :: 50 rRNAs :: 1, 1, 1 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS 454/Illumina assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02950 Type Strain :: Yes Greengenes ID :: 19003 Isolation Site :: Hot spring from Kanagawa, Ohwakudani, Japan on 9/1993 Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Hyperthermophile Temperature Optimum :: 90C pH :: 4.0 - 4.5 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:18:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,570 CDSs (total) :: 2,520 Genes (coding) :: 2,502 CDSs (with protein) :: 2,502 Genes (RNA) :: 50 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS 454/Illumina assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02950 Type Strain :: Yes Greengenes ID :: 19003 Isolation Site :: Hot spring from Kanagawa, Ohwakudani, Japan on 9/1993 Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Hyperthermophile Temperature Optimum :: 90C pH :: 4.0 - 4.5 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:18:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,570 CDSs (total) :: 2,520 Genes (coding) :: 2,502 CDSs (with protein) :: 2,502 Genes (RNA) :: 50 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 46REFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS 454/Illumina assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02950 Type Strain :: Yes Greengenes ID :: 19003 Isolation Site :: Hot spring from Kanagawa, Ohwakudani, Japan on 9/1993 Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Hyperthermophile Temperature Optimum :: 90C pH :: 4.0 - 4.5 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:18:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,570 CDSs (total) :: 2,520 Genes (coding) :: 2,502 CDSs (with protein) :: 2,502 Genes (RNA) :: 50 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 1REFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS 454/Illumina assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02950 Type Strain :: Yes Greengenes ID :: 19003 Isolation Site :: Hot spring from Kanagawa, Ohwakudani, Japan on 9/1993 Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Hyperthermophile Temperature Optimum :: 90C pH :: 4.0 - 4.5 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:18:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,570 CDSs (total) :: 2,520 Genes (coding) :: 2,502 CDSs (with protein) :: 2,502 Genes (RNA) :: 50 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 1 Pseudo Genes (total) :: 18REFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS 454/Illumina assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02950 Type Strain :: Yes Greengenes ID :: 19003 Isolation Site :: Hot spring from Kanagawa, Ohwakudani, Japan on 9/1993 Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Hyperthermophile Temperature Optimum :: 90C pH :: 4.0 - 4.5 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:18:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,570 CDSs (total) :: 2,520 Genes (coding) :: 2,502 CDSs (with protein) :: 2,502 Genes (RNA) :: 50 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 1 Pseudo Genes (total) :: 18 CDSs (without protein) :: 18REFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS 454/Illumina assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02950 Type Strain :: Yes Greengenes ID :: 19003 Isolation Site :: Hot spring from Kanagawa, Ohwakudani, Japan on 9/1993 Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Hyperthermophile Temperature Optimum :: 90C pH :: 4.0 - 4.5 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:18:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,570 CDSs (total) :: 2,520 Genes (coding) :: 2,502 CDSs (with protein) :: 2,502 Genes (RNA) :: 50 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 1 Pseudo Genes (total) :: 18 CDSs (without protein) :: 18 Pseudo Genes (ambiguous residues) :: 0 of 18REFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS 454/Illumina assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02950 Type Strain :: Yes Greengenes ID :: 19003 Isolation Site :: Hot spring from Kanagawa, Ohwakudani, Japan on 9/1993 Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Hyperthermophile Temperature Optimum :: 90C pH :: 4.0 - 4.5 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:18:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,570 CDSs (total) :: 2,520 Genes (coding) :: 2,502 CDSs (with protein) :: 2,502 Genes (RNA) :: 50 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 1 Pseudo Genes (total) :: 18 CDSs (without protein) :: 18 Pseudo Genes (ambiguous residues) :: 0 of 18 Pseudo Genes (frameshifted) :: 4 of 18REFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS 454/Illumina assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02950 Type Strain :: Yes Greengenes ID :: 19003 Isolation Site :: Hot spring from Kanagawa, Ohwakudani, Japan on 9/1993 Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Hyperthermophile Temperature Optimum :: 90C pH :: 4.0 - 4.5 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:18:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,570 CDSs (total) :: 2,520 Genes (coding) :: 2,502 CDSs (with protein) :: 2,502 Genes (RNA) :: 50 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 1 Pseudo Genes (total) :: 18 CDSs (without protein) :: 18 Pseudo Genes (ambiguous residues) :: 0 of 18 Pseudo Genes (frameshifted) :: 4 of 18 Pseudo Genes (incomplete) :: 8 of 18REFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS 454/Illumina assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02950 Type Strain :: Yes Greengenes ID :: 19003 Isolation Site :: Hot spring from Kanagawa, Ohwakudani, Japan on 9/1993 Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Hyperthermophile Temperature Optimum :: 90C pH :: 4.0 - 4.5 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:18:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,570 CDSs (total) :: 2,520 Genes (coding) :: 2,502 CDSs (with protein) :: 2,502 Genes (RNA) :: 50 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 1 Pseudo Genes (total) :: 18 CDSs (without protein) :: 18 Pseudo Genes (ambiguous residues) :: 0 of 18 Pseudo Genes (frameshifted) :: 4 of 18 Pseudo Genes (incomplete) :: 8 of 18 Pseudo Genes (internal stop) :: 7 of 18REFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS 454/Illumina assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02950 Type Strain :: Yes Greengenes ID :: 19003 Isolation Site :: Hot spring from Kanagawa, Ohwakudani, Japan on 9/1993 Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Hyperthermophile Temperature Optimum :: 90C pH :: 4.0 - 4.5 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:18:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,570 CDSs (total) :: 2,520 Genes (coding) :: 2,502 CDSs (with protein) :: 2,502 Genes (RNA) :: 50 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 1 Pseudo Genes (total) :: 18 CDSs (without protein) :: 18 Pseudo Genes (ambiguous residues) :: 0 of 18 Pseudo Genes (frameshifted) :: 4 of 18 Pseudo Genes (incomplete) :: 8 of 18 Pseudo Genes (internal stop) :: 7 of 18 Pseudo Genes (multiple problems) :: 1 of 18REFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS 454/Illumina assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02950 Type Strain :: Yes Greengenes ID :: 19003 Isolation Site :: Hot spring from Kanagawa, Ohwakudani, Japan on 9/1993 Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Hyperthermophile Temperature Optimum :: 90C pH :: 4.0 - 4.5 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:18:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,570 CDSs (total) :: 2,520 Genes (coding) :: 2,502 CDSs (with protein) :: 2,502 Genes (RNA) :: 50 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 1 Pseudo Genes (total) :: 18 CDSs (without protein) :: 18 Pseudo Genes (ambiguous residues) :: 0 of 18 Pseudo Genes (frameshifted) :: 4 of 18 Pseudo Genes (incomplete) :: 8 of 18 Pseudo Genes (internal stop) :: 7 of 18 Pseudo Genes (multiple problems) :: 1 of 18 CRISPR Arrays :: 9REFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS 454/Illumina assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02950 Type Strain :: Yes Greengenes ID :: 19003 Isolation Site :: Hot spring from Kanagawa, Ohwakudani, Japan on 9/1993 Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Hyperthermophile Temperature Optimum :: 90C pH :: 4.0 - 4.5 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:18:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,570 CDSs (total) :: 2,520 Genes (coding) :: 2,502 CDSs (with protein) :: 2,502 Genes (RNA) :: 50 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 1 Pseudo Genes (total) :: 18 CDSs (without protein) :: 18 Pseudo Genes (ambiguous residues) :: 0 of 18 Pseudo Genes (frameshifted) :: 4 of 18 Pseudo Genes (incomplete) :: 8 of 18 Pseudo Genes (internal stop) :: 7 of 18 Pseudo Genes (multiple problems) :: 1 of 18 CRISPR Arrays :: 9 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP002100.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085237 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Vulcanisaeta distributa DSM 14429 collection_date :: September 1993 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Japan environment :: Fresh water, Hot spring num_replicons :: Missing ref_biomaterial :: DSM 14429, JCM 11212 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS 454/Illumina assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02950 Type Strain :: Yes Greengenes ID :: 19003 Isolation Site :: Hot spring from Kanagawa, Ohwakudani, Japan on 9/1993 Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Hyperthermophile Temperature Optimum :: 90C pH :: 4.0 - 4.5 Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:18:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,570 CDSs (total) :: 2,520 Genes (coding) :: 2,502 CDSs (with protein) :: 2,502 Genes (RNA) :: 50 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 1 Pseudo Genes (total) :: 18 CDSs (without protein) :: 18 Pseudo Genes (ambiguous residues) :: 0 of 18 Pseudo Genes (frameshifted) :: 4 of 18 Pseudo Genes (incomplete) :: 8 of 18 Pseudo Genes (internal stop) :: 7 of 18 Pseudo Genes (multiple problems) :: 1 of 18 CRISPR Arrays :: 9 ##Genome-Annotation-Data-END## COMPLETENESS: full length.