-- dump date   	20120503_203648
-- class       	Genbank::repeat_region
-- table       	repeat_region_rpt_family
-- id	rpt_family
185431000035	polypyrimidine
185431000036	polypurine
185431000040	polypyrimidine
185431000165	polypurine
185431000166	polypyrimidine
185431000245	polypurine
185431000370	polypyrimidine
185431000469	polypyrimidine
185431000470	polypurine
185431000475	polypurine
185431000476	polypyrimidine
185431000813	polypurine
185431000822	tandem
185431000833	tandem
185431000838	tandem
185431000841	tandem
185431000852	tandem
185431000855	tandem
185431000867	tandem
185431000870	tandem
185431000875	tandem
185431000876	tandem
185431000877	tandem
185431000956	polypyrimidine
185431001137	polypurine
185431001138	polypyrimidine
185431001164	tandem
185431001165	tandem
185431001167	tandem
185431001169	tandem
185431001171	tandem
185431001173	tandem
185431001188	tandem
185431001193	tandem
185431001198	tandem
185431001201	polypurine
185431001202	polypyrimidine
185431001226	tandem
185431001625	polypurine
185431001626	polypyrimidine
185431001795	polypyrimidine
185431001810	polypyrimidine
185431002027	polypurine
185431002060	polypurine
185431002061	polypyrimidine
185431002074	polypyrimidine
185431002075	polypurine
185431002285	tandem
185431002288	tandem
185431002304	tandem
185431002307	tandem
185431002308	tandem
185431002311	tandem
185431002312	tandem
185431002315	tandem
185431002316	tandem
185431002511	polypyrimidine
185431002653	polypyrimidine
185431002654	polypurine
185431002671	tandem
185431002676	tandem
185431002699	tandem
185431002718	tandem
185431002725	tandem
185431003447	polypyrimidine
185431003453	tandem
185431003462	tandem
185431003465	tandem
185431003528	tandem
185431003536	tandem
185431003543	tandem
185431003548	tandem
185431003565	tandem
185431003709	polypyrimidine
185431003726	polypurine
185431004375	polypyrimidine
185431004376	polypurine
185431004736	polypyrimidine
185431004749	76-bp repeat region
185431004759	RIME-A
185431004760	ingi
185431004761	RIME-B
185431004762	RIME-A
185431004767	ingi
185431004768	RIME-B
185431004769	RIME-A
185431004774	ingi
185431004775	RIME-B
185431004776	RIME-A
185431004788	DIRE
185431004789	RIME-A
185431004796	ingi
185431004800	ingi element
185431004807	ingi element
185431004815	ingi element, ingi-like sequence - needs to be refined
185431004836	repeat_region
185431004864	polypurine
185431004874	RIME-less ingi element; annotation to be refined; previous_systematic_id=Tb09.v1.0120
185431004875	ingi element; blast hit to TBINGIC_3, 2967..1514 score: 2258 percent id: 95.00 EMBL:M16068, 5204 bp
185431004999	ingi
185431005166	polypyrimidine
185431005189	polypyrimidine
185431005273	DIRE
185431005274	repeat_unit
185431005314	spliced leader RNA array
185431005315	spliced leader RNA array
185431005316	partial blastn hit to retrotransposable 5096..6323 score: 2248 percent id: 99.00 element SLACS (embl:X17078)
185431005418	repeat_unit
185431005419	ingi element
185431005424	ingi with half of RIME B
185431005425	hit to RIME_A 3..253 score: 381 percent id: 94.00 from 1..253 of TBINGIC_3 (M16068)
185431005426	2 frameshifts and an internal stop codon
185431005427	half of RIME_B (1..121) score: 208 percent id: 97.00 4951..5204 from TBINGIC, 254 BP
185431005432	ingi element
185431005433	ingi fragment; truncated by insertion of another ingi element
185431005434	hit to RIME_B 243..1 score: 377 percent id: 94.00 4951..5204 from TBINGIC, 254 BP
185431005436	repeat_unit
185431005437	hit to RIME A 5..253 score: 345 percent id: 93.00, 1..253 of TBINGIC_3 (M16068)
185431005438	hit to RIME_B 1..243 score: 373 percent id: 93.00 4951..5204 from TBINGIC, 254 BP
185431005439	weak similarity to ingi protein 1 (orf1) and weak Pfam hit to rev. transcriptase domain; possibly truncated at N-terminus
185431005440	repeat_unit
185431005441	hit to RIME_A 6..253 score: 396 percent id: 95.00 from 1..253 of TBINGIC_3 (M16068)
185431005442	ingi element
185431005443	hit to RIME_B 13..243 score: 361 percent id: 94.00 4951..5204 from TBINGIC, 254 BP
185431005452	repeat_unit
185431005453	ingi element
185431005454	degenerate RIME A monomer. Two halves of monomer seperated by approx. 20 bases. blastn hit to RIME_A 108..22 score: 125 percent id: 93.00 from 1..253 of TBINGIC_3 (M16068); blastn hit to RIME_A 253..128 score: 202 percent id: 95.00 from 1..253 of TBINGIC_3 (M16068)
185431005455	repeat_unit
185431005456	blastx hit to Q8WPT3 1657..0 score: 261 percent id: 90.00 Q8WPT3 CAD21861.1 Desc: H25N7.04 protein.
185431005463	repeat_unit
185431005464	ingi element
185431005465	blastn hit to RIME_A 22..108 score: 125 percent id: 93.00 from 1..253 of TBINGIC_3 (M16068); hit to RIME_A 128..253 score: 202 percent id: 95.00 from 1..253 of TBINGIC_3 (M16068)
185431005466	blastn hit to RIME_B 1..244 score: 420 percent id: 97.00 4951..5204 from TBINGIC, 254 BP
185431005476	ingi element
185431005477	repeat_unit
185431005478	hit to RIME_B 1..251 score: 402 percent id: 95.00 4951..5204 from TBINGIC, 254 BP
185431005487	degenerate pseudogene with similarity to ingi protein 1(ORF1) and rev. transcriptase
185431005488	repeat_unit
185431005489	hit to RIME_A 6..237 score: 373 percent id: 95.00 from 1..253 of TBINGIC_3 (M16068)
185431005490	ingi element
185431005491	hit to RIME_B 1..243 score: 387 percent id: 95.00 4951..5204 from TBINGIC, 254 BP
185431005496	repeat_unit
185431005497	hit to RIME_B 242..1 score: 379 percent id: 94.00 4951..5204 from TBINGIC, 254 BP
185431005498	ingi element
185431005499	hit to RIME_A 237..7 score: 387 percent id: 96.00 from 1..253 of TBINGIC_3 (M16068)
185431005509	repeat_unit
185431005510	ingi element
185431005511	hit to RIME_A 253..86 score: 285 percent id: 96.00 from 1..253 of TBINGIC_3 (M16068)
185431005519	ingi element
185431005521	repeat_unit
185431005522	hit to RIME_B 243..1 score: 387 percent id: 95.00 4951..5204 from TBINGIC, 254 BP
185431005523	ingi element
185431005530	repeat_unit
185431005531	hit to RIME_A 11..251 score: 375 percent id: 95.00 from 1..253 of TBINGIC_3 (M16068)
185431005532	ingi element
185431005533	hit to RIME_A 11..251 score: 375 percent id: 95.00 from 1..253 of TBINGIC_3 (M16068)
185431005535	hit to Q26816 85..0 score: 168 percent id: 93.00 Q26816 CAA29181.1 Desc: ORF 1.
185431005537	ingi element
185431005542	ingi fragment
185431005543	truncated at N-terminal end and frameshifted
185431005544	hit to RIME_B 1..244 score: 379 percent id: 94.00 4951..5204 from TBINGIC, 254 BP
185431005545	hit to RIME_A 6..251 score: 385 percent id: 95.00 from 1..253 of TBINGIC_3 (M16068)
185431005546	ingi element
185431005550	ingi element
185431005561	RIME-B
185431005562	ingi
185431005563	RIME-A
185431005565	ingi
185431005566	RIME-B
185431005567	RIME-A
185431005568	RIME-A
185431005569	RIME-B
185431005570	RIME-A
185431005571	RIME-A
185431005572	RIME-B
185431005662	DIRE
185431005663	RIME-A
185431005664	DIRE
185431005696	ingi
185431005697	RIME-A
185431005815	polypurine
185431005923	RIME-A
185431005924	RIME-B
185431005967	polypyrimidine
185431005973	polypyrimidine
185431005974	polypyrimidine
185431005997	polypyrimidine
185431006017	polypurine
185431006023	RIME-A
185431006029	repeat_region
185431006032	repeat_region
185431006034	repeat_region
185431006095	polypurine
185431006277	DIRE
185431006298	polypyrimidine
185431006419	ingi
185431006420	RIME-A
185431006421	RIME-B
185431006422	ingi
185431006423	RIME-A
185431006424	RIME-B
185431006427	ingi
185431006428	RIME-B
185431006429	ingi
185431006430	RIME-A
185431006484	telomere
185431006502	TAA repeat
185431006651	76 bp repeat
185431006670	telomere
185431006751	ingi
185431006762	ingi
185431006763	ingi
185431006764	RIME-B
185431006765	RIME-A
185431006773	ingi
185431006774	RIME-B
185431006775	RIME-A
185431006782	DIRE
185431006783	ingi
185431006784	RIME-A
185431006785	ingi
185431006786	RIME-A
185431006787	RIME-B
185431006797	ingi
185431006798	RIME-A
185431006799	RIME-B
185431006807	RIME-B
185431006808	ingi
185431006814	DIRE
185431006828	ingi
185431006829	RIME-A
185431006830	RIME-B
185431006852	RIME-A
185431006853	RIME-B
185431006854	RIME-A
185431006924	RIME-A
185431006925	ingi
185431006926	ingi
185431006927	RIME-A
185431006933	polypyrimidine
185431007028	RIME-B
185431007029	ingi
185431007117	DIRE
185431007118	RIME-A
185431007119	RIME
185431007120	DIRE
185431007123	polypyrimidine
185431007147	RIME-A
185431007148	RIME-B
185431007202	DIRE
185431007203	RIME-A
185431007204	ingi
185431007205	RIME-B
185431007221	polypurine
185431007350	polypyrimidine
185431007379	RIME-A
185431007410	RIME-B
185431007411	ingi
185431007412	ingi
185431007413	RIME-A
185431007414	RIME-A
185431007443	DIRE
185431007484	RIME-B
185431007485	RIME-A
185431007582	RIME-A
185431007583	RIME-A
185431007584	RIME-B
185431007622	polypurine
185431007718	RIME-A
185431007719	DIRE
185431007862	RIME-A
185431007863	ingi
185431007871	RIME-A
185431007872	ingi
185431007873	RIME-B
185431007887	RIME-A
185431007888	RIME-B
185431007893	RIME-B
185431007894	ingi element with RHS element
185431007895	RIME-A
185431007897	ingi
185431007903	ingi
185431007904	ingi
185431007905	ingi
185431007909	ingi
185431007910	RIME-A
185431007911	RIME-B
185431007913	RIME-B
185431007914	ingi
185431007915	RIME-A
185431007921	ingi
185431007922	RIME-B
185431007923	RIME-A
185431007930	RIME-A
185431007935	RIME-A
185431007940	RIME-A
185431007941	RIME-B
185431007943	ingi
185431007944	RIME-A
185431007945	ingi
185431007946	RIME-B
185431007952	ingi element
185431007953	DIRE
185431007973	ingi
185431008011	DIRE
185431008019	ingi
185431008020	RIME-A
185431008021	RIME-B
185431008025	ingi
185431008026	RIME-A
185431008027	RIME-B
185431008034	ingi
185431008035	RIME-A
185431008036	RIME-B
185431008043	ingi
185431008044	RIME-A
185431008045	RIME-B