-- dump date 20240506_002218 -- class Genbank::Contig -- table contig_comment -- id comment NC_014160.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP001939.1.REFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261REFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at theREFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ)REFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de)REFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)REFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANLREFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START##REFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Thermosphaera aggregans M11TL, DSM 11486REFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Thermosphaera aggregans M11TL, DSM 11486 Culture Collection ID :: DSM 11486REFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Thermosphaera aggregans M11TL, DSM 11486 Culture Collection ID :: DSM 11486 GOLD Stamp ID :: Gi02946REFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Thermosphaera aggregans M11TL, DSM 11486 Culture Collection ID :: DSM 11486 GOLD Stamp ID :: Gi02946 Greengenes ID :: 923REFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Thermosphaera aggregans M11TL, DSM 11486 Culture Collection ID :: DSM 11486 GOLD Stamp ID :: Gi02946 Greengenes ID :: 923 Funding Program :: DOE-GEBA 2007REFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Thermosphaera aggregans M11TL, DSM 11486 Culture Collection ID :: DSM 11486 GOLD Stamp ID :: Gi02946 Greengenes ID :: 923 Funding Program :: DOE-GEBA 2007 Sequencing Depth :: 120.4x 454-TitaniumREFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Thermosphaera aggregans M11TL, DSM 11486 Culture Collection ID :: DSM 11486 GOLD Stamp ID :: Gi02946 Greengenes ID :: 923 Funding Program :: DOE-GEBA 2007 Sequencing Depth :: 120.4x 454-Titanium Gene Calling Method :: Prodigal, GenePRIMPREFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Thermosphaera aggregans M11TL, DSM 11486 Culture Collection ID :: DSM 11486 GOLD Stamp ID :: Gi02946 Greengenes ID :: 923 Funding Program :: DOE-GEBA 2007 Sequencing Depth :: 120.4x 454-Titanium Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Hot spring from Obsidian Pool atREFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Thermosphaera aggregans M11TL, DSM 11486 Culture Collection ID :: DSM 11486 GOLD Stamp ID :: Gi02946 Greengenes ID :: 923 Funding Program :: DOE-GEBA 2007 Sequencing Depth :: 120.4x 454-Titanium Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Hot spring from Obsidian Pool at Yellowstone Natl. ParkREFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Thermosphaera aggregans M11TL, DSM 11486 Culture Collection ID :: DSM 11486 GOLD Stamp ID :: Gi02946 Greengenes ID :: 923 Funding Program :: DOE-GEBA 2007 Sequencing Depth :: 120.4x 454-Titanium Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Hot spring from Obsidian Pool at Yellowstone Natl. Park Isolation Country :: USAREFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Thermosphaera aggregans M11TL, DSM 11486 Culture Collection ID :: DSM 11486 GOLD Stamp ID :: Gi02946 Greengenes ID :: 923 Funding Program :: DOE-GEBA 2007 Sequencing Depth :: 120.4x 454-Titanium Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Hot spring from Obsidian Pool at Yellowstone Natl. Park Isolation Country :: USA Latitude :: 44.806REFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Thermosphaera aggregans M11TL, DSM 11486 Culture Collection ID :: DSM 11486 GOLD Stamp ID :: Gi02946 Greengenes ID :: 923 Funding Program :: DOE-GEBA 2007 Sequencing Depth :: 120.4x 454-Titanium Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Hot spring from Obsidian Pool at Yellowstone Natl. Park Isolation Country :: USA Latitude :: 44.806 Longitude :: -110.448REFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Thermosphaera aggregans M11TL, DSM 11486 Culture Collection ID :: DSM 11486 GOLD Stamp ID :: Gi02946 Greengenes ID :: 923 Funding Program :: DOE-GEBA 2007 Sequencing Depth :: 120.4x 454-Titanium Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Hot spring from Obsidian Pool at Yellowstone Natl. Park Isolation Country :: USA Latitude :: 44.806 Longitude :: -110.448 Oxygen Requirement :: AnaerobeREFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Thermosphaera aggregans M11TL, DSM 11486 Culture Collection ID :: DSM 11486 GOLD Stamp ID :: Gi02946 Greengenes ID :: 923 Funding Program :: DOE-GEBA 2007 Sequencing Depth :: 120.4x 454-Titanium Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Hot spring from Obsidian Pool at Yellowstone Natl. Park Isolation Country :: USA Latitude :: 44.806 Longitude :: -110.448 Oxygen Requirement :: Anaerobe Cell Shape :: Coccus-shapedREFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Thermosphaera aggregans M11TL, DSM 11486 Culture Collection ID :: DSM 11486 GOLD Stamp ID :: Gi02946 Greengenes ID :: 923 Funding Program :: DOE-GEBA 2007 Sequencing Depth :: 120.4x 454-Titanium Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Hot spring from Obsidian Pool at Yellowstone Natl. Park Isolation Country :: USA Latitude :: 44.806 Longitude :: -110.448 Oxygen Requirement :: Anaerobe Cell Shape :: Coccus-shaped Motility :: MotileREFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Thermosphaera aggregans M11TL, DSM 11486 Culture Collection ID :: DSM 11486 GOLD Stamp ID :: Gi02946 Greengenes ID :: 923 Funding Program :: DOE-GEBA 2007 Sequencing Depth :: 120.4x 454-Titanium Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Hot spring from Obsidian Pool at Yellowstone Natl. Park Isolation Country :: USA Latitude :: 44.806 Longitude :: -110.448 Oxygen Requirement :: Anaerobe Cell Shape :: Coccus-shaped Motility :: Motile Sporulation :: NonsporulatingREFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Thermosphaera aggregans M11TL, DSM 11486 Culture Collection ID :: DSM 11486 GOLD Stamp ID :: Gi02946 Greengenes ID :: 923 Funding Program :: DOE-GEBA 2007 Sequencing Depth :: 120.4x 454-Titanium Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Hot spring from Obsidian Pool at Yellowstone Natl. Park Isolation Country :: USA Latitude :: 44.806 Longitude :: -110.448 Oxygen Requirement :: Anaerobe Cell Shape :: Coccus-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: HyperthermophileREFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Thermosphaera aggregans M11TL, DSM 11486 Culture Collection ID :: DSM 11486 GOLD Stamp ID :: Gi02946 Greengenes ID :: 923 Funding Program :: DOE-GEBA 2007 Sequencing Depth :: 120.4x 454-Titanium Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Hot spring from Obsidian Pool at Yellowstone Natl. Park Isolation Country :: USA Latitude :: 44.806 Longitude :: -110.448 Oxygen Requirement :: Anaerobe Cell Shape :: Coccus-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 85CREFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Thermosphaera aggregans M11TL, DSM 11486 Culture Collection ID :: DSM 11486 GOLD Stamp ID :: Gi02946 Greengenes ID :: 923 Funding Program :: DOE-GEBA 2007 Sequencing Depth :: 120.4x 454-Titanium Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Hot spring from Obsidian Pool at Yellowstone Natl. Park Isolation Country :: USA Latitude :: 44.806 Longitude :: -110.448 Oxygen Requirement :: Anaerobe Cell Shape :: Coccus-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 85C pH :: 6.5REFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Thermosphaera aggregans M11TL, DSM 11486 Culture Collection ID :: DSM 11486 GOLD Stamp ID :: Gi02946 Greengenes ID :: 923 Funding Program :: DOE-GEBA 2007 Sequencing Depth :: 120.4x 454-Titanium Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Hot spring from Obsidian Pool at Yellowstone Natl. Park Isolation Country :: USA Latitude :: 44.806 Longitude :: -110.448 Oxygen Requirement :: Anaerobe Cell Shape :: Coccus-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 85C pH :: 6.5 Gram Staining :: gram-REFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Thermosphaera aggregans M11TL, DSM 11486 Culture Collection ID :: DSM 11486 GOLD Stamp ID :: Gi02946 Greengenes ID :: 923 Funding Program :: DOE-GEBA 2007 Sequencing Depth :: 120.4x 454-Titanium Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Hot spring from Obsidian Pool at Yellowstone Natl. Park Isolation Country :: USA Latitude :: 44.806 Longitude :: -110.448 Oxygen Requirement :: Anaerobe Cell Shape :: Coccus-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 85C pH :: 6.5 Gram Staining :: gram- Biotic Relationship :: Free livingREFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Thermosphaera aggregans M11TL, DSM 11486 Culture Collection ID :: DSM 11486 GOLD Stamp ID :: Gi02946 Greengenes ID :: 923 Funding Program :: DOE-GEBA 2007 Sequencing Depth :: 120.4x 454-Titanium Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Hot spring from Obsidian Pool at Yellowstone Natl. Park Isolation Country :: USA Latitude :: 44.806 Longitude :: -110.448 Oxygen Requirement :: Anaerobe Cell Shape :: Coccus-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 85C pH :: 6.5 Gram Staining :: gram- Biotic Relationship :: Free living Diseases :: NoneREFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Thermosphaera aggregans M11TL, DSM 11486 Culture Collection ID :: DSM 11486 GOLD Stamp ID :: Gi02946 Greengenes ID :: 923 Funding Program :: DOE-GEBA 2007 Sequencing Depth :: 120.4x 454-Titanium Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Hot spring from Obsidian Pool at Yellowstone Natl. Park Isolation Country :: USA Latitude :: 44.806 Longitude :: -110.448 Oxygen Requirement :: Anaerobe Cell Shape :: Coccus-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 85C pH :: 6.5 Gram Staining :: gram- Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring, Solfataric fieldREFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Thermosphaera aggregans M11TL, DSM 11486 Culture Collection ID :: DSM 11486 GOLD Stamp ID :: Gi02946 Greengenes ID :: 923 Funding Program :: DOE-GEBA 2007 Sequencing Depth :: 120.4x 454-Titanium Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Hot spring from Obsidian Pool at Yellowstone Natl. Park Isolation Country :: USA Latitude :: 44.806 Longitude :: -110.448 Oxygen Requirement :: Anaerobe Cell Shape :: Coccus-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 85C pH :: 6.5 Gram Staining :: gram- Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring, Solfataric field Energy Source :: HeterotrophREFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Thermosphaera aggregans M11TL, DSM 11486 Culture Collection ID :: DSM 11486 GOLD Stamp ID :: Gi02946 Greengenes ID :: 923 Funding Program :: DOE-GEBA 2007 Sequencing Depth :: 120.4x 454-Titanium Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Hot spring from Obsidian Pool at Yellowstone Natl. Park Isolation Country :: USA Latitude :: 44.806 Longitude :: -110.448 Oxygen Requirement :: Anaerobe Cell Shape :: Coccus-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 85C pH :: 6.5 Gram Staining :: gram- Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring, Solfataric field Energy Source :: Heterotroph ##Metadata-END##REFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Thermosphaera aggregans M11TL, DSM 11486 Culture Collection ID :: DSM 11486 GOLD Stamp ID :: Gi02946 Greengenes ID :: 923 Funding Program :: DOE-GEBA 2007 Sequencing Depth :: 120.4x 454-Titanium Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Hot spring from Obsidian Pool at Yellowstone Natl. Park Isolation Country :: USA Latitude :: 44.806 Longitude :: -110.448 Oxygen Requirement :: Anaerobe Cell Shape :: Coccus-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 85C pH :: 6.5 Gram Staining :: gram- Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring, Solfataric field Energy Source :: Heterotroph ##Metadata-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Thermosphaera aggregans M11TL, DSM 11486 Culture Collection ID :: DSM 11486 GOLD Stamp ID :: Gi02946 Greengenes ID :: 923 Funding Program :: DOE-GEBA 2007 Sequencing Depth :: 120.4x 454-Titanium Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Hot spring from Obsidian Pool at Yellowstone Natl. Park Isolation Country :: USA Latitude :: 44.806 Longitude :: -110.448 Oxygen Requirement :: Anaerobe Cell Shape :: Coccus-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 85C pH :: 6.5 Gram Staining :: gram- Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring, Solfataric field Energy Source :: Heterotroph ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Thermosphaera aggregans M11TL, DSM 11486 Culture Collection ID :: DSM 11486 GOLD Stamp ID :: Gi02946 Greengenes ID :: 923 Funding Program :: DOE-GEBA 2007 Sequencing Depth :: 120.4x 454-Titanium Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Hot spring from Obsidian Pool at Yellowstone Natl. Park Isolation Country :: USA Latitude :: 44.806 Longitude :: -110.448 Oxygen Requirement :: Anaerobe Cell Shape :: Coccus-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 85C pH :: 6.5 Gram Staining :: gram- Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring, Solfataric field Energy Source :: Heterotroph ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:16:57REFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Thermosphaera aggregans M11TL, DSM 11486 Culture Collection ID :: DSM 11486 GOLD Stamp ID :: Gi02946 Greengenes ID :: 923 Funding Program :: DOE-GEBA 2007 Sequencing Depth :: 120.4x 454-Titanium Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Hot spring from Obsidian Pool at Yellowstone Natl. Park Isolation Country :: USA Latitude :: 44.806 Longitude :: -110.448 Oxygen Requirement :: Anaerobe Cell Shape :: Coccus-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 85C pH :: 6.5 Gram Staining :: gram- Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring, Solfataric field Energy Source :: Heterotroph ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:16:57 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Thermosphaera aggregans M11TL, DSM 11486 Culture Collection ID :: DSM 11486 GOLD Stamp ID :: Gi02946 Greengenes ID :: 923 Funding Program :: DOE-GEBA 2007 Sequencing Depth :: 120.4x 454-Titanium Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Hot spring from Obsidian Pool at Yellowstone Natl. Park Isolation Country :: USA Latitude :: 44.806 Longitude :: -110.448 Oxygen Requirement :: Anaerobe Cell Shape :: Coccus-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 85C pH :: 6.5 Gram Staining :: gram- Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring, Solfataric field Energy Source :: Heterotroph ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:16:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Thermosphaera aggregans M11TL, DSM 11486 Culture Collection ID :: DSM 11486 GOLD Stamp ID :: Gi02946 Greengenes ID :: 923 Funding Program :: DOE-GEBA 2007 Sequencing Depth :: 120.4x 454-Titanium Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Hot spring from Obsidian Pool at Yellowstone Natl. Park Isolation Country :: USA Latitude :: 44.806 Longitude :: -110.448 Oxygen Requirement :: Anaerobe Cell Shape :: Coccus-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 85C pH :: 6.5 Gram Staining :: gram- Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring, Solfataric field Energy Source :: Heterotroph ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:16:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Thermosphaera aggregans M11TL, DSM 11486 Culture Collection ID :: DSM 11486 GOLD Stamp ID :: Gi02946 Greengenes ID :: 923 Funding Program :: DOE-GEBA 2007 Sequencing Depth :: 120.4x 454-Titanium Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Hot spring from Obsidian Pool at Yellowstone Natl. Park Isolation Country :: USA Latitude :: 44.806 Longitude :: -110.448 Oxygen Requirement :: Anaerobe Cell Shape :: Coccus-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 85C pH :: 6.5 Gram Staining :: gram- Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring, Solfataric field Energy Source :: Heterotroph ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:16:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Thermosphaera aggregans M11TL, DSM 11486 Culture Collection ID :: DSM 11486 GOLD Stamp ID :: Gi02946 Greengenes ID :: 923 Funding Program :: DOE-GEBA 2007 Sequencing Depth :: 120.4x 454-Titanium Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Hot spring from Obsidian Pool at Yellowstone Natl. Park Isolation Country :: USA Latitude :: 44.806 Longitude :: -110.448 Oxygen Requirement :: Anaerobe Cell Shape :: Coccus-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 85C pH :: 6.5 Gram Staining :: gram- Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring, Solfataric field Energy Source :: Heterotroph ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:16:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5REFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Thermosphaera aggregans M11TL, DSM 11486 Culture Collection ID :: DSM 11486 GOLD Stamp ID :: Gi02946 Greengenes ID :: 923 Funding Program :: DOE-GEBA 2007 Sequencing Depth :: 120.4x 454-Titanium Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Hot spring from Obsidian Pool at Yellowstone Natl. Park Isolation Country :: USA Latitude :: 44.806 Longitude :: -110.448 Oxygen Requirement :: Anaerobe Cell Shape :: Coccus-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 85C pH :: 6.5 Gram Staining :: gram- Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring, Solfataric field Energy Source :: Heterotroph ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:16:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Thermosphaera aggregans M11TL, DSM 11486 Culture Collection ID :: DSM 11486 GOLD Stamp ID :: Gi02946 Greengenes ID :: 923 Funding Program :: DOE-GEBA 2007 Sequencing Depth :: 120.4x 454-Titanium Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Hot spring from Obsidian Pool at Yellowstone Natl. Park Isolation Country :: USA Latitude :: 44.806 Longitude :: -110.448 Oxygen Requirement :: Anaerobe Cell Shape :: Coccus-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 85C pH :: 6.5 Gram Staining :: gram- Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring, Solfataric field Energy Source :: Heterotroph ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:16:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,459REFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Thermosphaera aggregans M11TL, DSM 11486 Culture Collection ID :: DSM 11486 GOLD Stamp ID :: Gi02946 Greengenes ID :: 923 Funding Program :: DOE-GEBA 2007 Sequencing Depth :: 120.4x 454-Titanium Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Hot spring from Obsidian Pool at Yellowstone Natl. Park Isolation Country :: USA Latitude :: 44.806 Longitude :: -110.448 Oxygen Requirement :: Anaerobe Cell Shape :: Coccus-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 85C pH :: 6.5 Gram Staining :: gram- Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring, Solfataric field Energy Source :: Heterotroph ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:16:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,459 CDSs (total) :: 1,409REFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Thermosphaera aggregans M11TL, DSM 11486 Culture Collection ID :: DSM 11486 GOLD Stamp ID :: Gi02946 Greengenes ID :: 923 Funding Program :: DOE-GEBA 2007 Sequencing Depth :: 120.4x 454-Titanium Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Hot spring from Obsidian Pool at Yellowstone Natl. Park Isolation Country :: USA Latitude :: 44.806 Longitude :: -110.448 Oxygen Requirement :: Anaerobe Cell Shape :: Coccus-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 85C pH :: 6.5 Gram Staining :: gram- Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring, Solfataric field Energy Source :: Heterotroph ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:16:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,459 CDSs (total) :: 1,409 Genes (coding) :: 1,402REFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Thermosphaera aggregans M11TL, DSM 11486 Culture Collection ID :: DSM 11486 GOLD Stamp ID :: Gi02946 Greengenes ID :: 923 Funding Program :: DOE-GEBA 2007 Sequencing Depth :: 120.4x 454-Titanium Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Hot spring from Obsidian Pool at Yellowstone Natl. Park Isolation Country :: USA Latitude :: 44.806 Longitude :: -110.448 Oxygen Requirement :: Anaerobe Cell Shape :: Coccus-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 85C pH :: 6.5 Gram Staining :: gram- Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring, Solfataric field Energy Source :: Heterotroph ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:16:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,459 CDSs (total) :: 1,409 Genes (coding) :: 1,402 CDSs (with protein) :: 1,402REFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Thermosphaera aggregans M11TL, DSM 11486 Culture Collection ID :: DSM 11486 GOLD Stamp ID :: Gi02946 Greengenes ID :: 923 Funding Program :: DOE-GEBA 2007 Sequencing Depth :: 120.4x 454-Titanium Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Hot spring from Obsidian Pool at Yellowstone Natl. Park Isolation Country :: USA Latitude :: 44.806 Longitude :: -110.448 Oxygen Requirement :: Anaerobe Cell Shape :: Coccus-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 85C pH :: 6.5 Gram Staining :: gram- Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring, Solfataric field Energy Source :: Heterotroph ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:16:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,459 CDSs (total) :: 1,409 Genes (coding) :: 1,402 CDSs (with protein) :: 1,402 Genes (RNA) :: 50REFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Thermosphaera aggregans M11TL, DSM 11486 Culture Collection ID :: DSM 11486 GOLD Stamp ID :: Gi02946 Greengenes ID :: 923 Funding Program :: DOE-GEBA 2007 Sequencing Depth :: 120.4x 454-Titanium Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Hot spring from Obsidian Pool at Yellowstone Natl. Park Isolation Country :: USA Latitude :: 44.806 Longitude :: -110.448 Oxygen Requirement :: Anaerobe Cell Shape :: Coccus-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 85C pH :: 6.5 Gram Staining :: gram- Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring, Solfataric field Energy Source :: Heterotroph ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:16:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,459 CDSs (total) :: 1,409 Genes (coding) :: 1,402 CDSs (with protein) :: 1,402 Genes (RNA) :: 50 rRNAs :: 1, 1, 1 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Thermosphaera aggregans M11TL, DSM 11486 Culture Collection ID :: DSM 11486 GOLD Stamp ID :: Gi02946 Greengenes ID :: 923 Funding Program :: DOE-GEBA 2007 Sequencing Depth :: 120.4x 454-Titanium Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Hot spring from Obsidian Pool at Yellowstone Natl. Park Isolation Country :: USA Latitude :: 44.806 Longitude :: -110.448 Oxygen Requirement :: Anaerobe Cell Shape :: Coccus-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 85C pH :: 6.5 Gram Staining :: gram- Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring, Solfataric field Energy Source :: Heterotroph ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:16:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,459 CDSs (total) :: 1,409 Genes (coding) :: 1,402 CDSs (with protein) :: 1,402 Genes (RNA) :: 50 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Thermosphaera aggregans M11TL, DSM 11486 Culture Collection ID :: DSM 11486 GOLD Stamp ID :: Gi02946 Greengenes ID :: 923 Funding Program :: DOE-GEBA 2007 Sequencing Depth :: 120.4x 454-Titanium Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Hot spring from Obsidian Pool at Yellowstone Natl. Park Isolation Country :: USA Latitude :: 44.806 Longitude :: -110.448 Oxygen Requirement :: Anaerobe Cell Shape :: Coccus-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 85C pH :: 6.5 Gram Staining :: gram- Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring, Solfataric field Energy Source :: Heterotroph ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:16:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,459 CDSs (total) :: 1,409 Genes (coding) :: 1,402 CDSs (with protein) :: 1,402 Genes (RNA) :: 50 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 45REFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Thermosphaera aggregans M11TL, DSM 11486 Culture Collection ID :: DSM 11486 GOLD Stamp ID :: Gi02946 Greengenes ID :: 923 Funding Program :: DOE-GEBA 2007 Sequencing Depth :: 120.4x 454-Titanium Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Hot spring from Obsidian Pool at Yellowstone Natl. Park Isolation Country :: USA Latitude :: 44.806 Longitude :: -110.448 Oxygen Requirement :: Anaerobe Cell Shape :: Coccus-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 85C pH :: 6.5 Gram Staining :: gram- Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring, Solfataric field Energy Source :: Heterotroph ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:16:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,459 CDSs (total) :: 1,409 Genes (coding) :: 1,402 CDSs (with protein) :: 1,402 Genes (RNA) :: 50 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 2REFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Thermosphaera aggregans M11TL, DSM 11486 Culture Collection ID :: DSM 11486 GOLD Stamp ID :: Gi02946 Greengenes ID :: 923 Funding Program :: DOE-GEBA 2007 Sequencing Depth :: 120.4x 454-Titanium Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Hot spring from Obsidian Pool at Yellowstone Natl. Park Isolation Country :: USA Latitude :: 44.806 Longitude :: -110.448 Oxygen Requirement :: Anaerobe Cell Shape :: Coccus-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 85C pH :: 6.5 Gram Staining :: gram- Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring, Solfataric field Energy Source :: Heterotroph ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:16:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,459 CDSs (total) :: 1,409 Genes (coding) :: 1,402 CDSs (with protein) :: 1,402 Genes (RNA) :: 50 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 2 Pseudo Genes (total) :: 7REFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Thermosphaera aggregans M11TL, DSM 11486 Culture Collection ID :: DSM 11486 GOLD Stamp ID :: Gi02946 Greengenes ID :: 923 Funding Program :: DOE-GEBA 2007 Sequencing Depth :: 120.4x 454-Titanium Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Hot spring from Obsidian Pool at Yellowstone Natl. Park Isolation Country :: USA Latitude :: 44.806 Longitude :: -110.448 Oxygen Requirement :: Anaerobe Cell Shape :: Coccus-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 85C pH :: 6.5 Gram Staining :: gram- Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring, Solfataric field Energy Source :: Heterotroph ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:16:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,459 CDSs (total) :: 1,409 Genes (coding) :: 1,402 CDSs (with protein) :: 1,402 Genes (RNA) :: 50 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 2 Pseudo Genes (total) :: 7 CDSs (without protein) :: 7REFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Thermosphaera aggregans M11TL, DSM 11486 Culture Collection ID :: DSM 11486 GOLD Stamp ID :: Gi02946 Greengenes ID :: 923 Funding Program :: DOE-GEBA 2007 Sequencing Depth :: 120.4x 454-Titanium Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Hot spring from Obsidian Pool at Yellowstone Natl. Park Isolation Country :: USA Latitude :: 44.806 Longitude :: -110.448 Oxygen Requirement :: Anaerobe Cell Shape :: Coccus-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 85C pH :: 6.5 Gram Staining :: gram- Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring, Solfataric field Energy Source :: Heterotroph ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:16:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,459 CDSs (total) :: 1,409 Genes (coding) :: 1,402 CDSs (with protein) :: 1,402 Genes (RNA) :: 50 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 2 Pseudo Genes (total) :: 7 CDSs (without protein) :: 7 Pseudo Genes (ambiguous residues) :: 0 of 7REFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Thermosphaera aggregans M11TL, DSM 11486 Culture Collection ID :: DSM 11486 GOLD Stamp ID :: Gi02946 Greengenes ID :: 923 Funding Program :: DOE-GEBA 2007 Sequencing Depth :: 120.4x 454-Titanium Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Hot spring from Obsidian Pool at Yellowstone Natl. Park Isolation Country :: USA Latitude :: 44.806 Longitude :: -110.448 Oxygen Requirement :: Anaerobe Cell Shape :: Coccus-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 85C pH :: 6.5 Gram Staining :: gram- Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring, Solfataric field Energy Source :: Heterotroph ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:16:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,459 CDSs (total) :: 1,409 Genes (coding) :: 1,402 CDSs (with protein) :: 1,402 Genes (RNA) :: 50 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 2 Pseudo Genes (total) :: 7 CDSs (without protein) :: 7 Pseudo Genes (ambiguous residues) :: 0 of 7 Pseudo Genes (frameshifted) :: 2 of 7REFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Thermosphaera aggregans M11TL, DSM 11486 Culture Collection ID :: DSM 11486 GOLD Stamp ID :: Gi02946 Greengenes ID :: 923 Funding Program :: DOE-GEBA 2007 Sequencing Depth :: 120.4x 454-Titanium Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Hot spring from Obsidian Pool at Yellowstone Natl. Park Isolation Country :: USA Latitude :: 44.806 Longitude :: -110.448 Oxygen Requirement :: Anaerobe Cell Shape :: Coccus-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 85C pH :: 6.5 Gram Staining :: gram- Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring, Solfataric field Energy Source :: Heterotroph ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:16:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,459 CDSs (total) :: 1,409 Genes (coding) :: 1,402 CDSs (with protein) :: 1,402 Genes (RNA) :: 50 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 2 Pseudo Genes (total) :: 7 CDSs (without protein) :: 7 Pseudo Genes (ambiguous residues) :: 0 of 7 Pseudo Genes (frameshifted) :: 2 of 7 Pseudo Genes (incomplete) :: 3 of 7REFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Thermosphaera aggregans M11TL, DSM 11486 Culture Collection ID :: DSM 11486 GOLD Stamp ID :: Gi02946 Greengenes ID :: 923 Funding Program :: DOE-GEBA 2007 Sequencing Depth :: 120.4x 454-Titanium Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Hot spring from Obsidian Pool at Yellowstone Natl. Park Isolation Country :: USA Latitude :: 44.806 Longitude :: -110.448 Oxygen Requirement :: Anaerobe Cell Shape :: Coccus-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 85C pH :: 6.5 Gram Staining :: gram- Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring, Solfataric field Energy Source :: Heterotroph ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:16:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,459 CDSs (total) :: 1,409 Genes (coding) :: 1,402 CDSs (with protein) :: 1,402 Genes (RNA) :: 50 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 2 Pseudo Genes (total) :: 7 CDSs (without protein) :: 7 Pseudo Genes (ambiguous residues) :: 0 of 7 Pseudo Genes (frameshifted) :: 2 of 7 Pseudo Genes (incomplete) :: 3 of 7 Pseudo Genes (internal stop) :: 2 of 7REFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Thermosphaera aggregans M11TL, DSM 11486 Culture Collection ID :: DSM 11486 GOLD Stamp ID :: Gi02946 Greengenes ID :: 923 Funding Program :: DOE-GEBA 2007 Sequencing Depth :: 120.4x 454-Titanium Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Hot spring from Obsidian Pool at Yellowstone Natl. Park Isolation Country :: USA Latitude :: 44.806 Longitude :: -110.448 Oxygen Requirement :: Anaerobe Cell Shape :: Coccus-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 85C pH :: 6.5 Gram Staining :: gram- Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring, Solfataric field Energy Source :: Heterotroph ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:16:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,459 CDSs (total) :: 1,409 Genes (coding) :: 1,402 CDSs (with protein) :: 1,402 Genes (RNA) :: 50 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 2 Pseudo Genes (total) :: 7 CDSs (without protein) :: 7 Pseudo Genes (ambiguous residues) :: 0 of 7 Pseudo Genes (frameshifted) :: 2 of 7 Pseudo Genes (incomplete) :: 3 of 7 Pseudo Genes (internal stop) :: 2 of 7 CRISPR Arrays :: 1REFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Thermosphaera aggregans M11TL, DSM 11486 Culture Collection ID :: DSM 11486 GOLD Stamp ID :: Gi02946 Greengenes ID :: 923 Funding Program :: DOE-GEBA 2007 Sequencing Depth :: 120.4x 454-Titanium Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Hot spring from Obsidian Pool at Yellowstone Natl. Park Isolation Country :: USA Latitude :: 44.806 Longitude :: -110.448 Oxygen Requirement :: Anaerobe Cell Shape :: Coccus-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 85C pH :: 6.5 Gram Staining :: gram- Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring, Solfataric field Energy Source :: Heterotroph ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:16:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,459 CDSs (total) :: 1,409 Genes (coding) :: 1,402 CDSs (with protein) :: 1,402 Genes (RNA) :: 50 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 2 Pseudo Genes (total) :: 7 CDSs (without protein) :: 7 Pseudo Genes (ambiguous residues) :: 0 of 7 Pseudo Genes (frameshifted) :: 2 of 7 Pseudo Genes (incomplete) :: 3 of 7 Pseudo Genes (internal stop) :: 2 of 7 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP001939.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086261 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Thermosphaera aggregans M11TL, DSM 11486 Culture Collection ID :: DSM 11486 GOLD Stamp ID :: Gi02946 Greengenes ID :: 923 Funding Program :: DOE-GEBA 2007 Sequencing Depth :: 120.4x 454-Titanium Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Hot spring from Obsidian Pool at Yellowstone Natl. Park Isolation Country :: USA Latitude :: 44.806 Longitude :: -110.448 Oxygen Requirement :: Anaerobe Cell Shape :: Coccus-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Hyperthermophile Temperature Optimum :: 85C pH :: 6.5 Gram Staining :: gram- Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring, Solfataric field Energy Source :: Heterotroph ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:16:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,459 CDSs (total) :: 1,409 Genes (coding) :: 1,402 CDSs (with protein) :: 1,402 Genes (RNA) :: 50 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 2 Pseudo Genes (total) :: 7 CDSs (without protein) :: 7 Pseudo Genes (ambiguous residues) :: 0 of 7 Pseudo Genes (frameshifted) :: 2 of 7 Pseudo Genes (incomplete) :: 3 of 7 Pseudo Genes (internal stop) :: 2 of 7 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END## COMPLETENESS: full length.