-- dump date 20240506_002145 -- class Genbank::Contig -- table contig_comment -- id comment NZ_CP015106.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP015106.1.REFSEQ INFORMATION: The reference sequence is identical to CP015106.1. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP015106.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP015106.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP015106.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Sourc DNA available from the Oger lab UMR5240, Institut NationalREFSEQ INFORMATION: The reference sequence is identical to CP015106.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Sourc DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle,REFSEQ INFORMATION: The reference sequence is identical to CP015106.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Sourc DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France).REFSEQ INFORMATION: The reference sequence is identical to CP015106.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Sourc DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP015106.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Sourc DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8REFSEQ INFORMATION: The reference sequence is identical to CP015106.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Sourc DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 194REFSEQ INFORMATION: The reference sequence is identical to CP015106.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Sourc DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 194 Sequencing Technology :: Sanger dideoxy sequencing; Illumina;REFSEQ INFORMATION: The reference sequence is identical to CP015106.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Sourc DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 194 Sequencing Technology :: Sanger dideoxy sequencing; Illumina; IonTorrentREFSEQ INFORMATION: The reference sequence is identical to CP015106.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Sourc DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 194 Sequencing Technology :: Sanger dideoxy sequencing; Illumina; IonTorrent ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP015106.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Sourc DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 194 Sequencing Technology :: Sanger dideoxy sequencing; Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP015106.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Sourc DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 194 Sequencing Technology :: Sanger dideoxy sequencing; Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP015106.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Sourc DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 194 Sequencing Technology :: Sanger dideoxy sequencing; Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:08:33REFSEQ INFORMATION: The reference sequence is identical to CP015106.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Sourc DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 194 Sequencing Technology :: Sanger dideoxy sequencing; Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:08:33 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP015106.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Sourc DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 194 Sequencing Technology :: Sanger dideoxy sequencing; Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:08:33 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP015106.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Sourc DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 194 Sequencing Technology :: Sanger dideoxy sequencing; Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:08:33 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP015106.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Sourc DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 194 Sequencing Technology :: Sanger dideoxy sequencing; Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:08:33 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP015106.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Sourc DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 194 Sequencing Technology :: Sanger dideoxy sequencing; Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:08:33 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP015106.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Sourc DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 194 Sequencing Technology :: Sanger dideoxy sequencing; Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:08:33 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP015106.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Sourc DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 194 Sequencing Technology :: Sanger dideoxy sequencing; Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:08:33 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,066REFSEQ INFORMATION: The reference sequence is identical to CP015106.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Sourc DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 194 Sequencing Technology :: Sanger dideoxy sequencing; Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:08:33 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,066 CDSs (total) :: 2,015REFSEQ INFORMATION: The reference sequence is identical to CP015106.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Sourc DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 194 Sequencing Technology :: Sanger dideoxy sequencing; Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:08:33 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,066 CDSs (total) :: 2,015 Genes (coding) :: 2,005REFSEQ INFORMATION: The reference sequence is identical to CP015106.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Sourc DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 194 Sequencing Technology :: Sanger dideoxy sequencing; Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:08:33 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,066 CDSs (total) :: 2,015 Genes (coding) :: 2,005 CDSs (with protein) :: 2,005REFSEQ INFORMATION: The reference sequence is identical to CP015106.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Sourc DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 194 Sequencing Technology :: Sanger dideoxy sequencing; Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:08:33 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,066 CDSs (total) :: 2,015 Genes (coding) :: 2,005 CDSs (with protein) :: 2,005 Genes (RNA) :: 51REFSEQ INFORMATION: The reference sequence is identical to CP015106.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Sourc DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 194 Sequencing Technology :: Sanger dideoxy sequencing; Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:08:33 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,066 CDSs (total) :: 2,015 Genes (coding) :: 2,005 CDSs (with protein) :: 2,005 Genes (RNA) :: 51 rRNAs :: 2, 1, 1 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP015106.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Sourc DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 194 Sequencing Technology :: Sanger dideoxy sequencing; Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:08:33 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,066 CDSs (total) :: 2,015 Genes (coding) :: 2,005 CDSs (with protein) :: 2,005 Genes (RNA) :: 51 rRNAs :: 2, 1, 1 (5S, 16S, 23S) complete rRNAs :: 2, 1, 1 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP015106.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Sourc DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 194 Sequencing Technology :: Sanger dideoxy sequencing; Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:08:33 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,066 CDSs (total) :: 2,015 Genes (coding) :: 2,005 CDSs (with protein) :: 2,005 Genes (RNA) :: 51 rRNAs :: 2, 1, 1 (5S, 16S, 23S) complete rRNAs :: 2, 1, 1 (5S, 16S, 23S) tRNAs :: 45REFSEQ INFORMATION: The reference sequence is identical to CP015106.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Sourc DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 194 Sequencing Technology :: Sanger dideoxy sequencing; Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:08:33 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,066 CDSs (total) :: 2,015 Genes (coding) :: 2,005 CDSs (with protein) :: 2,005 Genes (RNA) :: 51 rRNAs :: 2, 1, 1 (5S, 16S, 23S) complete rRNAs :: 2, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 2REFSEQ INFORMATION: The reference sequence is identical to CP015106.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Sourc DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 194 Sequencing Technology :: Sanger dideoxy sequencing; Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:08:33 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,066 CDSs (total) :: 2,015 Genes (coding) :: 2,005 CDSs (with protein) :: 2,005 Genes (RNA) :: 51 rRNAs :: 2, 1, 1 (5S, 16S, 23S) complete rRNAs :: 2, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 2 Pseudo Genes (total) :: 10REFSEQ INFORMATION: The reference sequence is identical to CP015106.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Sourc DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 194 Sequencing Technology :: Sanger dideoxy sequencing; Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:08:33 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,066 CDSs (total) :: 2,015 Genes (coding) :: 2,005 CDSs (with protein) :: 2,005 Genes (RNA) :: 51 rRNAs :: 2, 1, 1 (5S, 16S, 23S) complete rRNAs :: 2, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 2 Pseudo Genes (total) :: 10 CDSs (without protein) :: 10REFSEQ INFORMATION: The reference sequence is identical to CP015106.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Sourc DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 194 Sequencing Technology :: Sanger dideoxy sequencing; Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:08:33 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,066 CDSs (total) :: 2,015 Genes (coding) :: 2,005 CDSs (with protein) :: 2,005 Genes (RNA) :: 51 rRNAs :: 2, 1, 1 (5S, 16S, 23S) complete rRNAs :: 2, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 2 Pseudo Genes (total) :: 10 CDSs (without protein) :: 10 Pseudo Genes (ambiguous residues) :: 0 of 10REFSEQ INFORMATION: The reference sequence is identical to CP015106.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Sourc DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 194 Sequencing Technology :: Sanger dideoxy sequencing; Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:08:33 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,066 CDSs (total) :: 2,015 Genes (coding) :: 2,005 CDSs (with protein) :: 2,005 Genes (RNA) :: 51 rRNAs :: 2, 1, 1 (5S, 16S, 23S) complete rRNAs :: 2, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 2 Pseudo Genes (total) :: 10 CDSs (without protein) :: 10 Pseudo Genes (ambiguous residues) :: 0 of 10 Pseudo Genes (frameshifted) :: 2 of 10REFSEQ INFORMATION: The reference sequence is identical to CP015106.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Sourc DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 194 Sequencing Technology :: Sanger dideoxy sequencing; Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:08:33 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,066 CDSs (total) :: 2,015 Genes (coding) :: 2,005 CDSs (with protein) :: 2,005 Genes (RNA) :: 51 rRNAs :: 2, 1, 1 (5S, 16S, 23S) complete rRNAs :: 2, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 2 Pseudo Genes (total) :: 10 CDSs (without protein) :: 10 Pseudo Genes (ambiguous residues) :: 0 of 10 Pseudo Genes (frameshifted) :: 2 of 10 Pseudo Genes (incomplete) :: 8 of 10REFSEQ INFORMATION: The reference sequence is identical to CP015106.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Sourc DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 194 Sequencing Technology :: Sanger dideoxy sequencing; Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:08:33 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,066 CDSs (total) :: 2,015 Genes (coding) :: 2,005 CDSs (with protein) :: 2,005 Genes (RNA) :: 51 rRNAs :: 2, 1, 1 (5S, 16S, 23S) complete rRNAs :: 2, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 2 Pseudo Genes (total) :: 10 CDSs (without protein) :: 10 Pseudo Genes (ambiguous residues) :: 0 of 10 Pseudo Genes (frameshifted) :: 2 of 10 Pseudo Genes (incomplete) :: 8 of 10 Pseudo Genes (internal stop) :: 0 of 10REFSEQ INFORMATION: The reference sequence is identical to CP015106.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Sourc DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 194 Sequencing Technology :: Sanger dideoxy sequencing; Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:08:33 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,066 CDSs (total) :: 2,015 Genes (coding) :: 2,005 CDSs (with protein) :: 2,005 Genes (RNA) :: 51 rRNAs :: 2, 1, 1 (5S, 16S, 23S) complete rRNAs :: 2, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 2 Pseudo Genes (total) :: 10 CDSs (without protein) :: 10 Pseudo Genes (ambiguous residues) :: 0 of 10 Pseudo Genes (frameshifted) :: 2 of 10 Pseudo Genes (incomplete) :: 8 of 10 Pseudo Genes (internal stop) :: 0 of 10 CRISPR Arrays :: 3REFSEQ INFORMATION: The reference sequence is identical to CP015106.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Sourc DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 194 Sequencing Technology :: Sanger dideoxy sequencing; Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:08:33 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,066 CDSs (total) :: 2,015 Genes (coding) :: 2,005 CDSs (with protein) :: 2,005 Genes (RNA) :: 51 rRNAs :: 2, 1, 1 (5S, 16S, 23S) complete rRNAs :: 2, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 2 Pseudo Genes (total) :: 10 CDSs (without protein) :: 10 Pseudo Genes (ambiguous residues) :: 0 of 10 Pseudo Genes (frameshifted) :: 2 of 10 Pseudo Genes (incomplete) :: 8 of 10 Pseudo Genes (internal stop) :: 0 of 10 CRISPR Arrays :: 3 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP015106.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Sourc DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 194 Sequencing Technology :: Sanger dideoxy sequencing; Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:08:33 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,066 CDSs (total) :: 2,015 Genes (coding) :: 2,005 CDSs (with protein) :: 2,005 Genes (RNA) :: 51 rRNAs :: 2, 1, 1 (5S, 16S, 23S) complete rRNAs :: 2, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 2 Pseudo Genes (total) :: 10 CDSs (without protein) :: 10 Pseudo Genes (ambiguous residues) :: 0 of 10 Pseudo Genes (frameshifted) :: 2 of 10 Pseudo Genes (incomplete) :: 8 of 10 Pseudo Genes (internal stop) :: 0 of 10 CRISPR Arrays :: 3 ##Genome-Annotation-Data-END## COMPLETENESS: full length.