-- dump date 20240506_002101 -- class Genbank::Contig -- table contig_comment -- id comment NZ_CP014855.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP014855.1.REFSEQ INFORMATION: The reference sequence is identical to CP014855.1. Source DNA available from the Oger lab UMR5240, Institut NationalREFSEQ INFORMATION: The reference sequence is identical to CP014855.1. Source DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle,REFSEQ INFORMATION: The reference sequence is identical to CP014855.1. Source DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France).REFSEQ INFORMATION: The reference sequence is identical to CP014855.1. Source DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP014855.1. Source DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP014855.1. Source DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP014855.1. Source DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP014855.1. Source DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8REFSEQ INFORMATION: The reference sequence is identical to CP014855.1. Source DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 316xREFSEQ INFORMATION: The reference sequence is identical to CP014855.1. Source DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 316x Sequencing Technology :: Illumina; IonTorrentREFSEQ INFORMATION: The reference sequence is identical to CP014855.1. Source DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 316x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP014855.1. Source DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 316x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP014855.1. Source DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 316x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP014855.1. Source DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 316x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:11:14REFSEQ INFORMATION: The reference sequence is identical to CP014855.1. Source DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 316x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:11:14 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP014855.1. Source DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 316x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:11:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP014855.1. Source DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 316x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:11:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP014855.1. Source DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 316x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:11:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP014855.1. Source DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 316x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:11:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP014855.1. Source DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 316x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:11:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP014855.1. Source DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 316x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:11:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,905REFSEQ INFORMATION: The reference sequence is identical to CP014855.1. Source DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 316x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:11:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,905 CDSs (total) :: 1,853REFSEQ INFORMATION: The reference sequence is identical to CP014855.1. Source DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 316x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:11:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,905 CDSs (total) :: 1,853 Genes (coding) :: 1,841REFSEQ INFORMATION: The reference sequence is identical to CP014855.1. Source DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 316x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:11:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,905 CDSs (total) :: 1,853 Genes (coding) :: 1,841 CDSs (with protein) :: 1,841REFSEQ INFORMATION: The reference sequence is identical to CP014855.1. Source DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 316x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:11:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,905 CDSs (total) :: 1,853 Genes (coding) :: 1,841 CDSs (with protein) :: 1,841 Genes (RNA) :: 52REFSEQ INFORMATION: The reference sequence is identical to CP014855.1. Source DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 316x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:11:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,905 CDSs (total) :: 1,853 Genes (coding) :: 1,841 CDSs (with protein) :: 1,841 Genes (RNA) :: 52 rRNAs :: 2, 1, 1 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP014855.1. Source DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 316x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:11:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,905 CDSs (total) :: 1,853 Genes (coding) :: 1,841 CDSs (with protein) :: 1,841 Genes (RNA) :: 52 rRNAs :: 2, 1, 1 (5S, 16S, 23S) complete rRNAs :: 2, 1, 1 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP014855.1. Source DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 316x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:11:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,905 CDSs (total) :: 1,853 Genes (coding) :: 1,841 CDSs (with protein) :: 1,841 Genes (RNA) :: 52 rRNAs :: 2, 1, 1 (5S, 16S, 23S) complete rRNAs :: 2, 1, 1 (5S, 16S, 23S) tRNAs :: 46REFSEQ INFORMATION: The reference sequence is identical to CP014855.1. Source DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 316x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:11:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,905 CDSs (total) :: 1,853 Genes (coding) :: 1,841 CDSs (with protein) :: 1,841 Genes (RNA) :: 52 rRNAs :: 2, 1, 1 (5S, 16S, 23S) complete rRNAs :: 2, 1, 1 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 2REFSEQ INFORMATION: The reference sequence is identical to CP014855.1. Source DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 316x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:11:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,905 CDSs (total) :: 1,853 Genes (coding) :: 1,841 CDSs (with protein) :: 1,841 Genes (RNA) :: 52 rRNAs :: 2, 1, 1 (5S, 16S, 23S) complete rRNAs :: 2, 1, 1 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 2 Pseudo Genes (total) :: 12REFSEQ INFORMATION: The reference sequence is identical to CP014855.1. Source DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 316x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:11:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,905 CDSs (total) :: 1,853 Genes (coding) :: 1,841 CDSs (with protein) :: 1,841 Genes (RNA) :: 52 rRNAs :: 2, 1, 1 (5S, 16S, 23S) complete rRNAs :: 2, 1, 1 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 2 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12REFSEQ INFORMATION: The reference sequence is identical to CP014855.1. Source DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 316x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:11:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,905 CDSs (total) :: 1,853 Genes (coding) :: 1,841 CDSs (with protein) :: 1,841 Genes (RNA) :: 52 rRNAs :: 2, 1, 1 (5S, 16S, 23S) complete rRNAs :: 2, 1, 1 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 2 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12REFSEQ INFORMATION: The reference sequence is identical to CP014855.1. Source DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 316x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:11:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,905 CDSs (total) :: 1,853 Genes (coding) :: 1,841 CDSs (with protein) :: 1,841 Genes (RNA) :: 52 rRNAs :: 2, 1, 1 (5S, 16S, 23S) complete rRNAs :: 2, 1, 1 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 2 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12 Pseudo Genes (frameshifted) :: 5 of 12REFSEQ INFORMATION: The reference sequence is identical to CP014855.1. Source DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 316x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:11:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,905 CDSs (total) :: 1,853 Genes (coding) :: 1,841 CDSs (with protein) :: 1,841 Genes (RNA) :: 52 rRNAs :: 2, 1, 1 (5S, 16S, 23S) complete rRNAs :: 2, 1, 1 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 2 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12 Pseudo Genes (frameshifted) :: 5 of 12 Pseudo Genes (incomplete) :: 7 of 12REFSEQ INFORMATION: The reference sequence is identical to CP014855.1. Source DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 316x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:11:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,905 CDSs (total) :: 1,853 Genes (coding) :: 1,841 CDSs (with protein) :: 1,841 Genes (RNA) :: 52 rRNAs :: 2, 1, 1 (5S, 16S, 23S) complete rRNAs :: 2, 1, 1 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 2 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12 Pseudo Genes (frameshifted) :: 5 of 12 Pseudo Genes (incomplete) :: 7 of 12 Pseudo Genes (internal stop) :: 3 of 12REFSEQ INFORMATION: The reference sequence is identical to CP014855.1. Source DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 316x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:11:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,905 CDSs (total) :: 1,853 Genes (coding) :: 1,841 CDSs (with protein) :: 1,841 Genes (RNA) :: 52 rRNAs :: 2, 1, 1 (5S, 16S, 23S) complete rRNAs :: 2, 1, 1 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 2 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12 Pseudo Genes (frameshifted) :: 5 of 12 Pseudo Genes (incomplete) :: 7 of 12 Pseudo Genes (internal stop) :: 3 of 12 Pseudo Genes (multiple problems) :: 3 of 12REFSEQ INFORMATION: The reference sequence is identical to CP014855.1. Source DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 316x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:11:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,905 CDSs (total) :: 1,853 Genes (coding) :: 1,841 CDSs (with protein) :: 1,841 Genes (RNA) :: 52 rRNAs :: 2, 1, 1 (5S, 16S, 23S) complete rRNAs :: 2, 1, 1 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 2 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12 Pseudo Genes (frameshifted) :: 5 of 12 Pseudo Genes (incomplete) :: 7 of 12 Pseudo Genes (internal stop) :: 3 of 12 Pseudo Genes (multiple problems) :: 3 of 12 CRISPR Arrays :: 1REFSEQ INFORMATION: The reference sequence is identical to CP014855.1. Source DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 316x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:11:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,905 CDSs (total) :: 1,853 Genes (coding) :: 1,841 CDSs (with protein) :: 1,841 Genes (RNA) :: 52 rRNAs :: 2, 1, 1 (5S, 16S, 23S) complete rRNAs :: 2, 1, 1 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 2 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12 Pseudo Genes (frameshifted) :: 5 of 12 Pseudo Genes (incomplete) :: 7 of 12 Pseudo Genes (internal stop) :: 3 of 12 Pseudo Genes (multiple problems) :: 3 of 12 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP014855.1. Source DNA available from the Oger lab UMR5240, Institut National des Sciences Appliquees, Batiment Pasteur, 11 Avenue Jean Capelle, 69621 Villeurbanne (France). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.10; Newbler v. 2.8 Genome Coverage :: 316x Sequencing Technology :: Illumina; IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:11:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,905 CDSs (total) :: 1,853 Genes (coding) :: 1,841 CDSs (with protein) :: 1,841 Genes (RNA) :: 52 rRNAs :: 2, 1, 1 (5S, 16S, 23S) complete rRNAs :: 2, 1, 1 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 2 Pseudo Genes (total) :: 12 CDSs (without protein) :: 12 Pseudo Genes (ambiguous residues) :: 0 of 12 Pseudo Genes (frameshifted) :: 5 of 12 Pseudo Genes (incomplete) :: 7 of 12 Pseudo Genes (internal stop) :: 3 of 12 Pseudo Genes (multiple problems) :: 3 of 12 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END## COMPLETENESS: full length.