-- dump date   	20140620_084609
-- class       	Genbank::Contig
-- table       	contig_comment
-- id	comment
NC_018630.1	PROVISIONAL REFSEQ: This record has not yet been subject to finalPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001845.PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001845. Streptococcus pneumoniae is a member of the Firmicutes division ofPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001845. Streptococcus pneumoniae is a member of the Firmicutes division of the domain bacteria and has been isolated from a blood sample takenPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001845. Streptococcus pneumoniae is a member of the Firmicutes division of the domain bacteria and has been isolated from a blood sample taken from a clinical pediatric case of invasive pneumococcal disease.PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001845. Streptococcus pneumoniae is a member of the Firmicutes division of the domain bacteria and has been isolated from a blood sample taken from a clinical pediatric case of invasive pneumococcal disease. This is a reference genome for the Human Microbiome Project. ThisPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001845. Streptococcus pneumoniae is a member of the Firmicutes division of the domain bacteria and has been isolated from a blood sample taken from a clinical pediatric case of invasive pneumococcal disease. This is a reference genome for the Human Microbiome Project. This project is co-owned with the Human Microbiome Project DACC.  SourcePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001845. Streptococcus pneumoniae is a member of the Firmicutes division of the domain bacteria and has been isolated from a blood sample taken from a clinical pediatric case of invasive pneumococcal disease. This is a reference genome for the Human Microbiome Project. This project is co-owned with the Human Microbiome Project DACC.  Source DNA provided by Martin Antonio, Ph.D. (Medical Research CouncilPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001845. Streptococcus pneumoniae is a member of the Firmicutes division of the domain bacteria and has been isolated from a blood sample taken from a clinical pediatric case of invasive pneumococcal disease. This is a reference genome for the Human Microbiome Project. This project is co-owned with the Human Microbiome Project DACC.  Source DNA provided by Martin Antonio, Ph.D. (Medical Research Council Laboratories, The Gambia:mantonio@mrc.gm).  Bacteria provided byPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001845. Streptococcus pneumoniae is a member of the Firmicutes division of the domain bacteria and has been isolated from a blood sample taken from a clinical pediatric case of invasive pneumococcal disease. This is a reference genome for the Human Microbiome Project. This project is co-owned with the Human Microbiome Project DACC.  Source DNA provided by Martin Antonio, Ph.D. (Medical Research Council Laboratories, The Gambia:mantonio@mrc.gm).  Bacteria provided by Martin Antonio, Ph.D. (mantonio@mrc.gm), as part of thePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001845. Streptococcus pneumoniae is a member of the Firmicutes division of the domain bacteria and has been isolated from a blood sample taken from a clinical pediatric case of invasive pneumococcal disease. This is a reference genome for the Human Microbiome Project. This project is co-owned with the Human Microbiome Project DACC.  Source DNA provided by Martin Antonio, Ph.D. (Medical Research Council Laboratories, The Gambia:mantonio@mrc.gm).  Bacteria provided by Martin Antonio, Ph.D. (mantonio@mrc.gm), as part of the 'Determining the genome sequence of a Gambian isolate ofPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001845. Streptococcus pneumoniae is a member of the Firmicutes division of the domain bacteria and has been isolated from a blood sample taken from a clinical pediatric case of invasive pneumococcal disease. This is a reference genome for the Human Microbiome Project. This project is co-owned with the Human Microbiome Project DACC.  Source DNA provided by Martin Antonio, Ph.D. (Medical Research Council Laboratories, The Gambia:mantonio@mrc.gm).  Bacteria provided by Martin Antonio, Ph.D. (mantonio@mrc.gm), as part of the 'Determining the genome sequence of a Gambian isolate of Streptococcus pneumoniae serotype 1 ST618' project (L2007.30),PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001845. Streptococcus pneumoniae is a member of the Firmicutes division of the domain bacteria and has been isolated from a blood sample taken from a clinical pediatric case of invasive pneumococcal disease. This is a reference genome for the Human Microbiome Project. This project is co-owned with the Human Microbiome Project DACC.  Source DNA provided by Martin Antonio, Ph.D. (Medical Research Council Laboratories, The Gambia:mantonio@mrc.gm).  Bacteria provided by Martin Antonio, Ph.D. (mantonio@mrc.gm), as part of the 'Determining the genome sequence of a Gambian isolate of Streptococcus pneumoniae serotype 1 ST618' project (L2007.30), funded by Medical Research Council, UK.PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001845. Streptococcus pneumoniae is a member of the Firmicutes division of the domain bacteria and has been isolated from a blood sample taken from a clinical pediatric case of invasive pneumococcal disease. This is a reference genome for the Human Microbiome Project. This project is co-owned with the Human Microbiome Project DACC.  Source DNA provided by Martin Antonio, Ph.D. (Medical Research Council Laboratories, The Gambia:mantonio@mrc.gm).  Bacteria provided by Martin Antonio, Ph.D. (mantonio@mrc.gm), as part of the 'Determining the genome sequence of a Gambian isolate of Streptococcus pneumoniae serotype 1 ST618' project (L2007.30), funded by Medical Research Council, UK. Draft assembly of Streptococcus pneumoniae PNI0373, generated byPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001845. Streptococcus pneumoniae is a member of the Firmicutes division of the domain bacteria and has been isolated from a blood sample taken from a clinical pediatric case of invasive pneumococcal disease. This is a reference genome for the Human Microbiome Project. This project is co-owned with the Human Microbiome Project DACC.  Source DNA provided by Martin Antonio, Ph.D. (Medical Research Council Laboratories, The Gambia:mantonio@mrc.gm).  Bacteria provided by Martin Antonio, Ph.D. (mantonio@mrc.gm), as part of the 'Determining the genome sequence of a Gambian isolate of Streptococcus pneumoniae serotype 1 ST618' project (L2007.30), funded by Medical Research Council, UK. Draft assembly of Streptococcus pneumoniae PNI0373, generated by Newbler assembler, was finished to a high quality standard byPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001845. Streptococcus pneumoniae is a member of the Firmicutes division of the domain bacteria and has been isolated from a blood sample taken from a clinical pediatric case of invasive pneumococcal disease. This is a reference genome for the Human Microbiome Project. This project is co-owned with the Human Microbiome Project DACC.  Source DNA provided by Martin Antonio, Ph.D. (Medical Research Council Laboratories, The Gambia:mantonio@mrc.gm).  Bacteria provided by Martin Antonio, Ph.D. (mantonio@mrc.gm), as part of the 'Determining the genome sequence of a Gambian isolate of Streptococcus pneumoniae serotype 1 ST618' project (L2007.30), funded by Medical Research Council, UK. Draft assembly of Streptococcus pneumoniae PNI0373, generated by Newbler assembler, was finished to a high quality standard by resolving ambiguous bases, correcting misassembled regions andPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001845. Streptococcus pneumoniae is a member of the Firmicutes division of the domain bacteria and has been isolated from a blood sample taken from a clinical pediatric case of invasive pneumococcal disease. This is a reference genome for the Human Microbiome Project. This project is co-owned with the Human Microbiome Project DACC.  Source DNA provided by Martin Antonio, Ph.D. (Medical Research Council Laboratories, The Gambia:mantonio@mrc.gm).  Bacteria provided by Martin Antonio, Ph.D. (mantonio@mrc.gm), as part of the 'Determining the genome sequence of a Gambian isolate of Streptococcus pneumoniae serotype 1 ST618' project (L2007.30), funded by Medical Research Council, UK. Draft assembly of Streptococcus pneumoniae PNI0373, generated by Newbler assembler, was finished to a high quality standard by resolving ambiguous bases, correcting misassembled regions and filling the gaps with targeted PCR and sequencing.PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001845. Streptococcus pneumoniae is a member of the Firmicutes division of the domain bacteria and has been isolated from a blood sample taken from a clinical pediatric case of invasive pneumococcal disease. This is a reference genome for the Human Microbiome Project. This project is co-owned with the Human Microbiome Project DACC.  Source DNA provided by Martin Antonio, Ph.D. (Medical Research Council Laboratories, The Gambia:mantonio@mrc.gm).  Bacteria provided by Martin Antonio, Ph.D. (mantonio@mrc.gm), as part of the 'Determining the genome sequence of a Gambian isolate of Streptococcus pneumoniae serotype 1 ST618' project (L2007.30), funded by Medical Research Council, UK. Draft assembly of Streptococcus pneumoniae PNI0373, generated by Newbler assembler, was finished to a high quality standard by resolving ambiguous bases, correcting misassembled regions and filling the gaps with targeted PCR and sequencing. Coding sequences were predicted using GeneMark v3.3 and Glimmer2PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001845. Streptococcus pneumoniae is a member of the Firmicutes division of the domain bacteria and has been isolated from a blood sample taken from a clinical pediatric case of invasive pneumococcal disease. This is a reference genome for the Human Microbiome Project. This project is co-owned with the Human Microbiome Project DACC.  Source DNA provided by Martin Antonio, Ph.D. (Medical Research Council Laboratories, The Gambia:mantonio@mrc.gm).  Bacteria provided by Martin Antonio, Ph.D. (mantonio@mrc.gm), as part of the 'Determining the genome sequence of a Gambian isolate of Streptococcus pneumoniae serotype 1 ST618' project (L2007.30), funded by Medical Research Council, UK. Draft assembly of Streptococcus pneumoniae PNI0373, generated by Newbler assembler, was finished to a high quality standard by resolving ambiguous bases, correcting misassembled regions and filling the gaps with targeted PCR and sequencing. Coding sequences were predicted using GeneMark v3.3 and Glimmer2 v2.13. Intergenic regions not spanned by GeneMark and Glimmer2 werePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001845. Streptococcus pneumoniae is a member of the Firmicutes division of the domain bacteria and has been isolated from a blood sample taken from a clinical pediatric case of invasive pneumococcal disease. This is a reference genome for the Human Microbiome Project. This project is co-owned with the Human Microbiome Project DACC.  Source DNA provided by Martin Antonio, Ph.D. (Medical Research Council Laboratories, The Gambia:mantonio@mrc.gm).  Bacteria provided by Martin Antonio, Ph.D. (mantonio@mrc.gm), as part of the 'Determining the genome sequence of a Gambian isolate of Streptococcus pneumoniae serotype 1 ST618' project (L2007.30), funded by Medical Research Council, UK. Draft assembly of Streptococcus pneumoniae PNI0373, generated by Newbler assembler, was finished to a high quality standard by resolving ambiguous bases, correcting misassembled regions and filling the gaps with targeted PCR and sequencing. Coding sequences were predicted using GeneMark v3.3 and Glimmer2 v2.13. Intergenic regions not spanned by GeneMark and Glimmer2 were blasted against NCBI's non-redundant (NR)  database and predictionsPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001845. Streptococcus pneumoniae is a member of the Firmicutes division of the domain bacteria and has been isolated from a blood sample taken from a clinical pediatric case of invasive pneumococcal disease. This is a reference genome for the Human Microbiome Project. This project is co-owned with the Human Microbiome Project DACC.  Source DNA provided by Martin Antonio, Ph.D. (Medical Research Council Laboratories, The Gambia:mantonio@mrc.gm).  Bacteria provided by Martin Antonio, Ph.D. (mantonio@mrc.gm), as part of the 'Determining the genome sequence of a Gambian isolate of Streptococcus pneumoniae serotype 1 ST618' project (L2007.30), funded by Medical Research Council, UK. Draft assembly of Streptococcus pneumoniae PNI0373, generated by Newbler assembler, was finished to a high quality standard by resolving ambiguous bases, correcting misassembled regions and filling the gaps with targeted PCR and sequencing. Coding sequences were predicted using GeneMark v3.3 and Glimmer2 v2.13. Intergenic regions not spanned by GeneMark and Glimmer2 were blasted against NCBI's non-redundant (NR)  database and predictions generated based on protein alignments. tRNA genes were determinedPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001845. Streptococcus pneumoniae is a member of the Firmicutes division of the domain bacteria and has been isolated from a blood sample taken from a clinical pediatric case of invasive pneumococcal disease. This is a reference genome for the Human Microbiome Project. This project is co-owned with the Human Microbiome Project DACC.  Source DNA provided by Martin Antonio, Ph.D. (Medical Research Council Laboratories, The Gambia:mantonio@mrc.gm).  Bacteria provided by Martin Antonio, Ph.D. (mantonio@mrc.gm), as part of the 'Determining the genome sequence of a Gambian isolate of Streptococcus pneumoniae serotype 1 ST618' project (L2007.30), funded by Medical Research Council, UK. Draft assembly of Streptococcus pneumoniae PNI0373, generated by Newbler assembler, was finished to a high quality standard by resolving ambiguous bases, correcting misassembled regions and filling the gaps with targeted PCR and sequencing. Coding sequences were predicted using GeneMark v3.3 and Glimmer2 v2.13. Intergenic regions not spanned by GeneMark and Glimmer2 were blasted against NCBI's non-redundant (NR)  database and predictions generated based on protein alignments. tRNA genes were determined using tRNAscan-SE 1.23 and non-coding RNA genes by RNAmmer-1.2 andPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001845. Streptococcus pneumoniae is a member of the Firmicutes division of the domain bacteria and has been isolated from a blood sample taken from a clinical pediatric case of invasive pneumococcal disease. This is a reference genome for the Human Microbiome Project. This project is co-owned with the Human Microbiome Project DACC.  Source DNA provided by Martin Antonio, Ph.D. (Medical Research Council Laboratories, The Gambia:mantonio@mrc.gm).  Bacteria provided by Martin Antonio, Ph.D. (mantonio@mrc.gm), as part of the 'Determining the genome sequence of a Gambian isolate of Streptococcus pneumoniae serotype 1 ST618' project (L2007.30), funded by Medical Research Council, UK. Draft assembly of Streptococcus pneumoniae PNI0373, generated by Newbler assembler, was finished to a high quality standard by resolving ambiguous bases, correcting misassembled regions and filling the gaps with targeted PCR and sequencing. Coding sequences were predicted using GeneMark v3.3 and Glimmer2 v2.13. Intergenic regions not spanned by GeneMark and Glimmer2 were blasted against NCBI's non-redundant (NR)  database and predictions generated based on protein alignments. tRNA genes were determined using tRNAscan-SE 1.23 and non-coding RNA genes by RNAmmer-1.2 and Rfam v8.0. Gene names are generated at the contig level and may notPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001845. Streptococcus pneumoniae is a member of the Firmicutes division of the domain bacteria and has been isolated from a blood sample taken from a clinical pediatric case of invasive pneumococcal disease. This is a reference genome for the Human Microbiome Project. This project is co-owned with the Human Microbiome Project DACC.  Source DNA provided by Martin Antonio, Ph.D. (Medical Research Council Laboratories, The Gambia:mantonio@mrc.gm).  Bacteria provided by Martin Antonio, Ph.D. (mantonio@mrc.gm), as part of the 'Determining the genome sequence of a Gambian isolate of Streptococcus pneumoniae serotype 1 ST618' project (L2007.30), funded by Medical Research Council, UK. Draft assembly of Streptococcus pneumoniae PNI0373, generated by Newbler assembler, was finished to a high quality standard by resolving ambiguous bases, correcting misassembled regions and filling the gaps with targeted PCR and sequencing. Coding sequences were predicted using GeneMark v3.3 and Glimmer2 v2.13. Intergenic regions not spanned by GeneMark and Glimmer2 were blasted against NCBI's non-redundant (NR)  database and predictions generated based on protein alignments. tRNA genes were determined using tRNAscan-SE 1.23 and non-coding RNA genes by RNAmmer-1.2 and Rfam v8.0. Gene names are generated at the contig level and may not necessarily reflect any known order or orientation between contigs.PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001845. Streptococcus pneumoniae is a member of the Firmicutes division of the domain bacteria and has been isolated from a blood sample taken from a clinical pediatric case of invasive pneumococcal disease. This is a reference genome for the Human Microbiome Project. This project is co-owned with the Human Microbiome Project DACC.  Source DNA provided by Martin Antonio, Ph.D. (Medical Research Council Laboratories, The Gambia:mantonio@mrc.gm).  Bacteria provided by Martin Antonio, Ph.D. (mantonio@mrc.gm), as part of the 'Determining the genome sequence of a Gambian isolate of Streptococcus pneumoniae serotype 1 ST618' project (L2007.30), funded by Medical Research Council, UK. Draft assembly of Streptococcus pneumoniae PNI0373, generated by Newbler assembler, was finished to a high quality standard by resolving ambiguous bases, correcting misassembled regions and filling the gaps with targeted PCR and sequencing. Coding sequences were predicted using GeneMark v3.3 and Glimmer2 v2.13. Intergenic regions not spanned by GeneMark and Glimmer2 were blasted against NCBI's non-redundant (NR)  database and predictions generated based on protein alignments. tRNA genes were determined using tRNAscan-SE 1.23 and non-coding RNA genes by RNAmmer-1.2 and Rfam v8.0. Gene names are generated at the contig level and may not necessarily reflect any known order or orientation between contigs. COMPLETENESS: full length.