-- dump date 20140620_080129 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_006014193.1 386318030 12612035 242..1585 1 NC_017568.1 identified by match to protein family HMM PF00308, match to protein family HMM PF08299, match to protein family HMM TIGR00362; chromosomal replication initiator protein DnaA 1585 dnaA 12612035 dnaA Staphylococcus pseudintermedius ED99 chromosomal replication initiator protein DnaA YP_006014193.1 242 D 984892 CDS YP_006014194.1 386318031 12612037 1757..2890 1 NC_017568.1 identified by match to protein family HMM PF00712, match to protein family HMM PF02767, match to protein family HMM PF02768, match to protein family HMM TIGR00663; DNA polymerase III subunit beta 2890 dnaN 12612037 dnaN Staphylococcus pseudintermedius ED99 DNA polymerase III subunit beta YP_006014194.1 1757 D 984892 CDS YP_006014195.1 386318032 12612039 3173..3862 1 NC_017568.1 protein-disulfide isomerase 3862 12612039 SPSE_0003 Staphylococcus pseudintermedius ED99 protein-disulfide isomerase YP_006014195.1 3173 D 984892 CDS YP_006014196.1 386318033 12612041 4000..4221 1 NC_017568.1 hypothetical protein 4221 12612041 SPSE_0004 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014196.1 4000 D 984892 CDS YP_006014197.1 386318034 12612082 4218..5333 1 NC_017568.1 identified by match to protein family HMM PF02463, match to protein family HMM TIGR00611; DNA replication and repair protein RecF 5333 12612082 SPSE_0005 Staphylococcus pseudintermedius ED99 DNA replication and repair protein RecF YP_006014197.1 4218 D 984892 CDS YP_006014198.1 386318035 12612084 5356..7278 1 NC_017568.1 identified by match to protein family HMM PF00204, match to protein family HMM PF00986, match to protein family HMM PF01751, match to protein family HMM PF02518, match to protein family HMM TIGR01059; DNA gyrase subunit B 7278 gyrB 12612084 gyrB Staphylococcus pseudintermedius ED99 DNA gyrase subunit B YP_006014198.1 5356 D 984892 CDS YP_006014199.1 386318036 12612086 7314..9950 1 NC_017568.1 identified by match to protein family HMM PF00521, match to protein family HMM PF03989, match to protein family HMM TIGR01063; DNA gyrase subunit A 9950 gyrA 12612086 gyrA Staphylococcus pseudintermedius ED99 DNA gyrase subunit A YP_006014199.1 7314 D 984892 CDS YP_006014200.1 386318037 12612092 complement(10202..11017) 1 NC_017568.1 identified by match to protein family HMM PF01256, match to protein family HMM TIGR00196; carbohydrate kinase family protein 11017 12612092 SPSE_0008 Staphylococcus pseudintermedius ED99 carbohydrate kinase family protein YP_006014200.1 10202 R 984892 CDS YP_006014201.1 386318038 12612033 11367..12869 1 NC_017568.1 identified by match to protein family HMM PF00221, match to protein family HMM TIGR01225; histidine ammonia-lyase 12869 hutH 12612033 hutH Staphylococcus pseudintermedius ED99 histidine ammonia-lyase YP_006014201.1 11367 D 984892 CDS YP_006014202.1 386318039 12609785 13187..14467 1 NC_017568.1 identified by match to protein family HMM PF00587, match to protein family HMM PF02403, match to protein family HMM TIGR00414; seryl-tRNA synthetase 14467 serS 12609785 serS Staphylococcus pseudintermedius ED99 seryl-tRNA synthetase YP_006014202.1 13187 D 984892 CDS YP_006014203.1 386318040 12609786 14779..15471 1 NC_017568.1 identified by match to protein family HMM PF03591; branched-chain amino acid permease 15471 12609786 SPSE_0011 Staphylococcus pseudintermedius ED99 branched-chain amino acid permease YP_006014203.1 14779 D 984892 CDS YP_006014204.1 386318041 12609787 15468..15797 1 NC_017568.1 identified by match to protein family HMM PF05437; hypothetical protein 15797 12609787 SPSE_0012 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014204.1 15468 D 984892 CDS YP_006014205.1 386318042 12609788 16052..17017 1 NC_017568.1 identified by match to protein family HMM PF00561; homoserine O-acetyltransferase 17017 12609788 SPSE_0014 Staphylococcus pseudintermedius ED99 homoserine O-acetyltransferase YP_006014205.1 16052 D 984892 CDS YP_006014206.1 386318043 12609789 17171..18160 1 NC_017568.1 membrane protein 18160 12609789 SPSE_0015 Staphylococcus pseudintermedius ED99 membrane protein YP_006014206.1 17171 D 984892 CDS YP_006014207.1 386318044 12609790 18165..20132 1 NC_017568.1 identified by match to protein family HMM PF01368, match to protein family HMM PF02272; DHH subfamily phosphodiesterase 20132 12609790 SPSE_0016 Staphylococcus pseudintermedius ED99 DHH subfamily phosphodiesterase YP_006014207.1 18165 D 984892 CDS YP_006014208.1 386318045 12609791 20129..20575 1 NC_017568.1 identified by match to protein family HMM PF01281, match to protein family HMM PF03948, match to protein family HMM TIGR00158; 50S ribosomal protein L9 20575 rplI 12609791 rplI Staphylococcus pseudintermedius ED99 50S ribosomal protein L9 YP_006014208.1 20129 D 984892 CDS YP_006014209.1 386318046 12609792 21036..22436 1 NC_017568.1 identified by match to protein family HMM PF00772, match to protein family HMM PF03796, match to protein family HMM TIGR00665; replicative DNA helicase 22436 dnaB 12609792 dnaB Staphylococcus pseudintermedius ED99 replicative DNA helicase YP_006014209.1 21036 D 984892 CDS YP_006014210.1 386318047 12609793 22808..24091 1 NC_017568.1 identified by match to protein family HMM PF00709, match to protein family HMM TIGR00184; adenylosuccinate synthetase 24091 purA 12609793 purA Staphylococcus pseudintermedius ED99 adenylosuccinate synthetase YP_006014210.1 22808 D 984892 CDS YP_006014211.1 386318048 12609794 complement(24310..25203) 1 NC_017568.1 identified by match to protein family HMM PF02588; membrane protein 25203 12609794 SPSE_0020 Staphylococcus pseudintermedius ED99 membrane protein YP_006014211.1 24310 R 984892 CDS YP_006014212.1 386318049 12609797 25903..26241 1 NC_017568.1 hypothetical protein 26241 12609797 SPSE_0023 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014212.1 25903 D 984892 CDS YP_006014213.1 386318050 12609798 26392..27093 1 NC_017568.1 identified by match to protein family HMM PF00072, match to protein family HMM PF00486; two-component response regulator VicR 27093 vicR 12609798 vicR Staphylococcus pseudintermedius ED99 two-component response regulator VicR YP_006014213.1 26392 D 984892 CDS YP_006014214.1 386318051 12609799 27106..28938 1 NC_017568.1 identified by match to protein family HMM PF00512, match to protein family HMM PF00672, match to protein family HMM PF00989, match to protein family HMM PF02518, match to protein family HMM TIGR00229; two-component sensor histidine kinase VicS 28938 vicS 12609799 vicS Staphylococcus pseudintermedius ED99 two-component sensor histidine kinase VicS YP_006014214.1 27106 D 984892 CDS YP_006014215.1 386318052 12609800 28928..30265 1 NC_017568.1 identified by match to protein family HMM PF07435; hypothetical protein 30265 12609800 SPSE_0026 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014215.1 28928 D 984892 CDS YP_006014216.1 386318053 12609801 30262..31041 1 NC_017568.1 identified by match to protein family HMM PF09648; hypothetical protein 31041 12609801 SPSE_0027 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014216.1 30262 D 984892 CDS YP_006014217.1 386318054 12609802 31055..31846 1 NC_017568.1 identified by match to protein family HMM PF00753; metallo-beta-lactamase superfamily protein 31846 12609802 SPSE_0028 Staphylococcus pseudintermedius ED99 metallo-beta-lactamase superfamily protein YP_006014217.1 31055 D 984892 CDS YP_006014218.1 386318055 12609803 32559..33038 1 NC_017568.1 identified by match to protein family HMM PF02590, match to protein family HMM TIGR00246; hypothetical protein 33038 orfX 12609803 orfX Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014218.1 32559 D 984892 CDS YP_006014219.1 386318056 12609804 complement(33257..35017) 1 NC_017568.1 identified by match to protein family HMM PF02384, match to protein family HMM PF07669; putative DNA methyltransferase 35017 12609804 SPSE_0030 Staphylococcus pseudintermedius ED99 putative DNA methyltransferase YP_006014219.1 33257 R 984892 CDS YP_006014220.1 386318057 12609805 35076..35966 1 NC_017568.1 putative restriction endonuclease 35966 12609805 SPSE_0031 Staphylococcus pseudintermedius ED99 putative restriction endonuclease YP_006014220.1 35076 D 984892 CDS YP_006014221.1 386318058 12609807 38301..39476 1 NC_017568.1 identified by match to protein family HMM PF04171, match to protein family HMM PF04235; membrane protein 39476 12609807 SPSE_0033 Staphylococcus pseudintermedius ED99 membrane protein YP_006014221.1 38301 D 984892 CDS YP_006014222.1 386318059 12609808 39641..39826 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 39826 12609808 SPSE_0034 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014222.1 39641 D 984892 CDS YP_006014223.1 386318060 12609809 40293..41408 1 NC_017568.1 identified by match to protein family HMM PF01262, match to protein family HMM PF05222; alanine dehydrogenase 1 41408 ald1 12609809 ald1 Staphylococcus pseudintermedius ED99 alanine dehydrogenase 1 YP_006014223.1 40293 D 984892 CDS YP_006014224.1 386318061 12609810 41445..42485 1 NC_017568.1 identified by match to protein family HMM PF00291, match to protein family HMM TIGR01127; threonine dehydratase, catabolic 42485 ilvA-1 12609810 ilvA-1 Staphylococcus pseudintermedius ED99 threonine dehydratase, catabolic YP_006014224.1 41445 D 984892 CDS YP_006014225.1 386318062 12609811 42518..43840 1 NC_017568.1 identified by match to protein family HMM PF00324; amino acid permease 43840 12609811 SPSE_0037 Staphylococcus pseudintermedius ED99 amino acid permease YP_006014225.1 42518 D 984892 CDS YP_006014226.1 386318063 12609812 44064..46112 1 NC_017568.1 identified by match to protein family HMM PF00122, match to protein family HMM PF00702, match to protein family HMM TIGR01494, match to protein family HMM TIGR01511, match to protein family HMM TIGR01525; copper-translocating P-type ATPase 46112 12609812 SPSE_0038 Staphylococcus pseudintermedius ED99 copper-translocating P-type ATPase YP_006014226.1 44064 D 984892 CDS YP_006014227.1 386318064 12609813 46295..46867 1 NC_017568.1 identified by match to protein family HMM PF01381; transcriptional regulator 46867 12609813 SPSE_0039 Staphylococcus pseudintermedius ED99 transcriptional regulator YP_006014227.1 46295 D 984892 CDS YP_006014228.1 386318065 12609814 47241..47453 1 NC_017568.1 hypothetical protein 47453 12609814 SPSE_0040 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014228.1 47241 D 984892 CDS YP_006014229.1 386318066 12609815 47463..47675 1 NC_017568.1 transcriptional regulator 47675 12609815 SPSE_0041 Staphylococcus pseudintermedius ED99 transcriptional regulator YP_006014229.1 47463 D 984892 CDS YP_006014230.1 386318067 12609816 47911..48954 1 NC_017568.1 identified by match to protein family HMM PF00746, match to protein family HMM PF01476, match to protein family HMM PF02216, match to protein family HMM PF04650, match to protein family HMM TIGR01167, match to protein family HMM TIGR01168; immunoglobulin G binding protein A spa2 48954 spsP 12609816 spsP Staphylococcus pseudintermedius ED99 immunoglobulin G binding protein A spa2 YP_006014230.1 47911 D 984892 CDS YP_006014231.1 386318068 12609817 49516..50904 1 NC_017568.1 identified by match to protein family HMM PF01476, match to protein family HMM PF02216, match to protein family HMM PF04650, match to protein family HMM TIGR01167, match to protein family HMM TIGR01168; immunoglobulin G binding protein A spa1 50904 spsQ 12609817 spsQ Staphylococcus pseudintermedius ED99 immunoglobulin G binding protein A spa1 YP_006014231.1 49516 D 984892 CDS YP_006014232.1 386318069 12609818 complement(51513..52220) 1 NC_017568.1 identified by match to protein family HMM PF00392, match to protein family HMM PF07702; GntR family transcriptional regulator 52220 12609818 SPSE_0044 Staphylococcus pseudintermedius ED99 GntR family transcriptional regulator YP_006014232.1 51513 R 984892 CDS YP_006014233.1 386318070 12609819 52542..53984 1 NC_017568.1 identified by match to protein family HMM PF00232; 6-phospho-beta-glucosidase 53984 bglA 12609819 bglA Staphylococcus pseudintermedius ED99 6-phospho-beta-glucosidase YP_006014233.1 52542 D 984892 CDS YP_006014234.1 386318071 12609820 54215..54337 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 54337 12609820 SPSE_0046 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014234.1 54215 D 984892 CDS YP_006014235.1 386318072 12609821 54839..57631 1 NC_017568.1 identified by match to protein family HMM PF00746, match to protein family HMM PF04650, match to protein family HMM TIGR01167, match to protein family HMM TIGR01168; LPXTG-motif cell wall anchor domain-containing protein 57631 spsL 12609821 spsL Staphylococcus pseudintermedius ED99 LPXTG-motif cell wall anchor domain-containing protein YP_006014235.1 54839 D 984892 CDS YP_006014236.1 386318073 12609822 complement(57967..59391) 1 NC_017568.1 identified by match to protein family HMM PF03441; deoxyribodipyrimidine photo-lyase 59391 12609822 SPSE_0048 Staphylococcus pseudintermedius ED99 deoxyribodipyrimidine photo-lyase YP_006014236.1 57967 R 984892 CDS YP_006014237.1 386318074 12609823 complement(59478..59828) 1 NC_017568.1 identified by match to protein family HMM PF00376; MerR family transcriptional regulator 59828 12609823 SPSE_0049 Staphylococcus pseudintermedius ED99 MerR family transcriptional regulator YP_006014237.1 59478 R 984892 CDS YP_006014238.1 386318075 12609824 59906..60586 1 NC_017568.1 identified by match to protein family HMM PF01965; ThiJ/PfpI family protein 60586 12609824 SPSE_0050 Staphylococcus pseudintermedius ED99 ThiJ/PfpI family protein YP_006014238.1 59906 D 984892 CDS YP_006014239.1 386318076 12609825 60611..61276 1 NC_017568.1 identified by match to protein family HMM PF01370; hypothetical protein 61276 12609825 SPSE_0051 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014239.1 60611 D 984892 CDS YP_006014240.1 386318077 12609826 61280..62284 1 NC_017568.1 identified by match to protein family HMM PF00107; NADP-dependent oxidoreductase 62284 12609826 SPSE_0052 Staphylococcus pseudintermedius ED99 NADP-dependent oxidoreductase YP_006014240.1 61280 D 984892 CDS YP_006014241.1 386318078 12609827 62295..62651 1 NC_017568.1 hypothetical protein 62651 12609827 SPSE_0053 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014241.1 62295 D 984892 CDS YP_006014242.1 386318079 12609828 63164..64297 1 NC_017568.1 identified by match to protein family HMM PF02661; hypothetical protein 64297 12609828 SPSE_0054 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014242.1 63164 D 984892 CDS YP_006014243.1 386318080 12609829 64272..64412 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 64412 12609829 SPSE_0055 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014243.1 64272 D 984892 CDS YP_006014244.1 386318081 12609830 64863..66029 1 NC_017568.1 identified by match to protein family HMM PF01546, match to protein family HMM PF07687, match to protein family HMM TIGR01910; succinyl-diaminopimelate desuccinylase 66029 12609830 SPSE_0056 Staphylococcus pseudintermedius ED99 succinyl-diaminopimelate desuccinylase YP_006014244.1 64863 D 984892 CDS YP_006014245.1 386318082 12609831 66277..66747 1 NC_017568.1 identified by match to protein family HMM PF01625; peptide methionine sulfoxide reductase 66747 12609831 SPSE_0057 Staphylococcus pseudintermedius ED99 peptide methionine sulfoxide reductase YP_006014245.1 66277 D 984892 CDS YP_006014246.1 386318083 12609832 complement(66910..67644) 1 NC_017568.1 identified by match to protein family HMM PF02146; NAD-dependent deacetylase 67644 npdA 12609832 npdA Staphylococcus pseudintermedius ED99 NAD-dependent deacetylase YP_006014246.1 66910 R 984892 CDS YP_006014247.1 386318084 12609833 complement(68108..68836) 1 NC_017568.1 identified by match to protein family HMM PF00027; CarD family transcriptional regulator 68836 12609833 SPSE_0059 Staphylococcus pseudintermedius ED99 CarD family transcriptional regulator YP_006014247.1 68108 R 984892 CDS YP_006014248.1 386318085 12609834 complement(68855..69796) 1 NC_017568.1 identified by match to protein family HMM PF00696, match to protein family HMM TIGR00746; carbamate kinase 69796 arcC 12609834 arcC Staphylococcus pseudintermedius ED99 carbamate kinase YP_006014248.1 68855 R 984892 CDS YP_006014249.1 386318086 12609835 complement(69812..71242) 1 NC_017568.1 identified by match to protein family HMM PF00324, match to protein family HMM PF03845, match to protein family HMM TIGR00905; arginine/ornithine antiporter 71242 arcD 12609835 arcD Staphylococcus pseudintermedius ED99 arginine/ornithine antiporter YP_006014249.1 69812 R 984892 CDS YP_006014250.1 386318087 12609836 complement(71363..72370) 1 NC_017568.1 identified by match to protein family HMM PF00185, match to protein family HMM PF02729, match to protein family HMM TIGR00658; ornithine carbamoyltransferase, catabolic 72370 arcB-1 12609836 arcB-1 Staphylococcus pseudintermedius ED99 ornithine carbamoyltransferase, catabolic YP_006014250.1 71363 R 984892 CDS YP_006014251.1 386318088 12609837 complement(72407..73642) 1 NC_017568.1 identified by match to protein family HMM PF02274, match to protein family HMM TIGR01078; arginine deiminase 73642 arcA 12609837 arcA Staphylococcus pseudintermedius ED99 arginine deiminase YP_006014251.1 72407 R 984892 CDS YP_006014252.1 386318089 12609838 74030..74509 1 NC_017568.1 identified by match to protein family HMM PF02863; ArgR family transcriptional regulator 74509 12609838 SPSE_0064 Staphylococcus pseudintermedius ED99 ArgR family transcriptional regulator YP_006014252.1 74030 D 984892 CDS YP_006014253.1 386318090 12609839 74627..75499 1 NC_017568.1 identified by match to protein family HMM PF06028; cell surface hydrolase 75499 12609839 SPSE_0065 Staphylococcus pseudintermedius ED99 cell surface hydrolase YP_006014253.1 74627 D 984892 CDS YP_006014254.1 386318091 12609840 complement(75731..76054) 1 NC_017568.1 hypothetical protein 76054 12609840 SPSE_0066 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014254.1 75731 R 984892 CDS YP_006014255.1 386318092 12609841 76649..77482 1 NC_017568.1 identified by match to protein family HMM PF01510; extracellular amidase 77482 12609841 SPSE_0067 Staphylococcus pseudintermedius ED99 extracellular amidase YP_006014255.1 76649 D 984892 CDS YP_006014256.1 386318093 12609842 complement(77537..78037) 1 NC_017568.1 identified by match to protein family HMM PF07274; integral membrane protein 78037 12609842 SPSE_0068 Staphylococcus pseudintermedius ED99 integral membrane protein YP_006014256.1 77537 R 984892 CDS YP_006014257.1 386318094 12609843 78419..78976 1 NC_017568.1 identified by match to protein family HMM PF03358; NADPH:quinone reductase protein 78976 12609843 SPSE_0069 Staphylococcus pseudintermedius ED99 NADPH:quinone reductase protein YP_006014257.1 78419 D 984892 CDS YP_006014258.1 386318095 12609844 79638..83960 1 NC_017568.1 identified by match to protein family HMM PF00746, match to protein family HMM PF04650, match to protein family HMM PF08428, match to protein family HMM TIGR01167, match to protein family HMM TIGR01168, match to protein family HMM TIGR02331; LPXTG-motif cell wall anchor domain-containing protein 83960 spsM 12609844 spsM Staphylococcus pseudintermedius ED99 LPXTG-motif cell wall anchor domain-containing protein YP_006014258.1 79638 D 984892 CDS YP_006014259.1 386318096 12609845 84162..84443 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 84443 12609845 SPSE_0071 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014259.1 84162 D 984892 CDS YP_006014260.1 386318097 12609846 85066..85320 1 NC_017568.1 replication protein, truncated 85320 12609846 SPSE_0072 Staphylococcus pseudintermedius ED99 replication protein, truncated YP_006014260.1 85066 D 984892 CDS YP_006014261.1 386318098 12609847 85670..86278 1 NC_017568.1 hypothetical protein 86278 12609847 SPSE_0073 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014261.1 85670 D 984892 CDS YP_006014262.1 386318099 12609848 86949..87065 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 87065 12609848 SPSE_0074 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014262.1 86949 D 984892 CDS YP_006014263.1 386318100 12609849 87248..88291 1 NC_017568.1 identified by match to protein family HMM PF04171, match to protein family HMM PF04235; membrane protein 88291 12609849 SPSE_0075 Staphylococcus pseudintermedius ED99 membrane protein YP_006014263.1 87248 D 984892 CDS YP_006014264.1 386318101 12609850 complement(88582..89823) 1 NC_017568.1 identified by match to protein family HMM PF02388; FemAB family protein 89823 fmhA 12609850 fmhA Staphylococcus pseudintermedius ED99 FemAB family protein YP_006014264.1 88582 R 984892 CDS YP_006014265.1 386318102 12609851 90122..91102 1 NC_017568.1 identified by match to protein family HMM PF00356, match to protein family HMM PF00532; LacI family transcriptional regulator 91102 12609851 SPSE_0077 Staphylococcus pseudintermedius ED99 LacI family transcriptional regulator YP_006014265.1 90122 D 984892 CDS YP_006014266.1 386318103 12609852 91287..92363 1 NC_017568.1 identified by match to protein family HMM PF01408, match to protein family HMM PF02894; putative oxidoreductase 92363 12609852 SPSE_0078 Staphylococcus pseudintermedius ED99 putative oxidoreductase YP_006014266.1 91287 D 984892 CDS YP_006014267.1 386318104 12609853 92385..93425 1 NC_017568.1 identified by match to protein family HMM PF01118, match to protein family HMM PF01408, match to protein family HMM PF02894; putative oxidoreductase 93425 12609853 SPSE_0079 Staphylococcus pseudintermedius ED99 putative oxidoreductase YP_006014267.1 92385 D 984892 CDS YP_006014268.1 386318105 12609854 93441..94409 1 NC_017568.1 identified by match to protein family HMM PF01261, match to protein family HMM PF07582; sugar phosphate isomerase/epimerase family protein 94409 12609854 SPSE_0080 Staphylococcus pseudintermedius ED99 sugar phosphate isomerase/epimerase family protein YP_006014268.1 93441 D 984892 CDS YP_006014269.1 386318106 12609855 94444..96102 1 NC_017568.1 identified by match to protein family HMM PF00128; oligo-1,6-glucosidase 96102 malL 12609855 malL Staphylococcus pseudintermedius ED99 oligo-1,6-glucosidase YP_006014269.1 94444 D 984892 CDS YP_006014270.1 386318107 12609856 96349..96618 1 NC_017568.1 hypothetical protein 96618 12609856 SPSE_0082 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014270.1 96349 D 984892 CDS YP_006014271.1 386318108 12609857 complement(96670..97509) 1 NC_017568.1 identified by match to protein family HMM PF00528; maltose/maltodextrin transport permease protein 97509 12609857 SPSE_0083 Staphylococcus pseudintermedius ED99 maltose/maltodextrin transport permease protein YP_006014271.1 96670 R 984892 CDS YP_006014272.1 386318109 12609858 complement(97511..98779) 1 NC_017568.1 identified by match to protein family HMM PF00528; maltose/maltodextrin transport permease protein 98779 12609858 SPSE_0084 Staphylococcus pseudintermedius ED99 maltose/maltodextrin transport permease protein YP_006014272.1 97511 R 984892 CDS YP_006014273.1 386318110 12609859 complement(98794..100053) 1 NC_017568.1 identified by match to protein family HMM PF01547; maltose/maltodextrin transport system protein 100053 12609859 SPSE_0085 Staphylococcus pseudintermedius ED99 maltose/maltodextrin transport system protein YP_006014273.1 98794 R 984892 CDS YP_006014274.1 386318111 12609860 complement(100066..101163) 1 NC_017568.1 identified by match to protein family HMM PF00005, match to protein family HMM PF03459, match to protein family HMM PF08402; multiple sugar-binding transport ATP-binding protein 101163 12609860 SPSE_0086 Staphylococcus pseudintermedius ED99 multiple sugar-binding transport ATP-binding protein YP_006014274.1 100066 R 984892 CDS YP_006014275.1 386318112 12609861 complement(101596..102768) 1 NC_017568.1 identified by match to protein family HMM PF00999; sodium/hydrogen exchanger 102768 12609861 SPSE_0087 Staphylococcus pseudintermedius ED99 sodium/hydrogen exchanger YP_006014275.1 101596 R 984892 CDS YP_006014276.1 386318113 12609862 complement(102774..103259) 1 NC_017568.1 identified by match to protein family HMM PF02080; hypothetical protein 103259 12609862 SPSE_0088 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014276.1 102774 R 984892 CDS YP_006014277.1 386318114 12609863 103405..103848 1 NC_017568.1 identified by match to protein family HMM PF06902; hypothetical protein 103848 12609863 SPSE_0089 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014277.1 103405 D 984892 CDS YP_006014278.1 386318115 12609864 103864..104754 1 NC_017568.1 identified by match to protein family HMM PF00903; glyoxalase bleomycin resistance protein 104754 12609864 SPSE_0090 Staphylococcus pseudintermedius ED99 glyoxalase bleomycin resistance protein YP_006014278.1 103864 D 984892 CDS YP_006014279.1 386318116 12609865 104980..106170 1 NC_017568.1 identified by match to protein family HMM PF07690; putative transporter, major facilitator family 106170 12609865 SPSE_0091 Staphylococcus pseudintermedius ED99 putative transporter, major facilitator family YP_006014279.1 104980 D 984892 CDS YP_006014280.1 386318117 12609867 107304..107417 1 NC_017568.1 hypothetical protein 107417 12609867 SPSE_0094 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014280.1 107304 D 984892 CDS YP_006014281.1 386318118 12609868 107448..108161 1 NC_017568.1 identified by match to protein family HMM PF00892; membrane protein 108161 12609868 SPSE_0095 Staphylococcus pseudintermedius ED99 membrane protein YP_006014281.1 107448 D 984892 CDS YP_006014282.1 386318119 12609869 108255..108458 1 NC_017568.1 hypothetical protein 108458 12609869 SPSE_0096 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014282.1 108255 D 984892 CDS YP_006014283.1 386318120 12609870 complement(108555..109307) 1 NC_017568.1 membrane protein 109307 12609870 SPSE_0097 Staphylococcus pseudintermedius ED99 membrane protein YP_006014283.1 108555 R 984892 CDS YP_006014284.1 386318121 12609871 complement(109309..110196) 1 NC_017568.1 identified by match to protein family HMM PF00005; multidrug ABC transporter ATPase 110196 12609871 SPSE_0098 Staphylococcus pseudintermedius ED99 multidrug ABC transporter ATPase YP_006014284.1 109309 R 984892 CDS YP_006014285.1 386318122 12609872 complement(110638..111213) 1 NC_017568.1 identified by match to protein family HMM PF02517; CAAX amino protease family protein 111213 12609872 SPSE_0099 Staphylococcus pseudintermedius ED99 CAAX amino protease family protein YP_006014285.1 110638 R 984892 CDS YP_006014286.1 386318123 12609873 complement(112087..116787) 1 NC_017568.1 identified by match to protein family HMM PF04650, match to protein family HMM TIGR01167, match to protein family HMM TIGR01168; LPXTG-motif cell wall anchor domain-containing protein 116787 spsG 12609873 spsG Staphylococcus pseudintermedius ED99 LPXTG-motif cell wall anchor domain-containing protein YP_006014286.1 112087 R 984892 CDS YP_006014287.1 386318124 12609874 116866..116988 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 116988 12609874 SPSE_0101 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014287.1 116866 D 984892 CDS YP_006014288.1 386318125 12609875 117225..117935 1 NC_017568.1 identified by match to protein family HMM PF00392, match to protein family HMM PF07702; GntR family transcriptional regulator 117935 12609875 SPSE_0102 Staphylococcus pseudintermedius ED99 GntR family transcriptional regulator YP_006014288.1 117225 D 984892 CDS YP_006014289.1 386318126 12609876 117964..119079 1 NC_017568.1 identified by match to protein family HMM PF01380; tagatose-6-phosphate ketose/aldose isomerase 119079 12609876 SPSE_0103 Staphylococcus pseudintermedius ED99 tagatose-6-phosphate ketose/aldose isomerase YP_006014289.1 117964 D 984892 CDS YP_006014290.1 386318127 12609877 119086..120024 1 NC_017568.1 identified by match to protein family HMM PF00294, match to protein family HMM TIGR03168; tagatose-6-phosphate kinase 120024 12609877 SPSE_0104 Staphylococcus pseudintermedius ED99 tagatose-6-phosphate kinase YP_006014290.1 119086 D 984892 CDS YP_006014291.1 386318128 12609878 120018..120959 1 NC_017568.1 identified by match to protein family HMM PF01791; tagatose 1,6-diphosphate aldolase 120959 12609878 SPSE_0105 Staphylococcus pseudintermedius ED99 tagatose 1,6-diphosphate aldolase YP_006014291.1 120018 D 984892 CDS YP_006014292.1 386318129 12609879 120972..122744 1 NC_017568.1 identified by match to protein family HMM PF01301, match to protein family HMM PF02449; glycosyl hydrolase 122744 12609879 SPSE_0106 Staphylococcus pseudintermedius ED99 glycosyl hydrolase YP_006014292.1 120972 D 984892 CDS YP_006014293.1 386318130 12609880 122759..123238 1 NC_017568.1 identified by match to protein family HMM PF03830; PTS system, mannose/fructose/N-acetylgalactosamine-specific component IIA 123238 12609880 SPSE_0107 Staphylococcus pseudintermedius ED99 PTS system, mannose/fructose/N-acetylgalactosamine-specific component IIA YP_006014293.1 122759 D 984892 CDS YP_006014294.1 386318131 12609881 123260..124159 1 NC_017568.1 identified by match to protein family HMM PF03609; PTS system, mannose/fructose/N-acetylgalactosamine-specific component IIC 124159 12609881 SPSE_0108 Staphylococcus pseudintermedius ED99 PTS system, mannose/fructose/N-acetylgalactosamine-specific component IIC YP_006014294.1 123260 D 984892 CDS YP_006014295.1 386318132 12609882 124146..125030 1 NC_017568.1 identified by match to protein family HMM PF03613; PTS system, mannose/fructose/N-acetylgalactosamine-specific component IID 125030 12609882 SPSE_0109 Staphylococcus pseudintermedius ED99 PTS system, mannose/fructose/N-acetylgalactosamine-specific component IID YP_006014295.1 124146 D 984892 CDS YP_006014296.1 386318133 12609883 125052..125453 1 NC_017568.1 identified by match to protein family HMM PF03610; PTS system, mannose/fructose/N-acetylgalactosamine-specific component IIA 125453 12609883 SPSE_0110 Staphylococcus pseudintermedius ED99 PTS system, mannose/fructose/N-acetylgalactosamine-specific component IIA YP_006014296.1 125052 D 984892 CDS YP_006014297.1 386318134 12609884 125485..126639 1 NC_017568.1 identified by match to protein family HMM PF01979, match to protein family HMM PF07969, match to protein family HMM TIGR00221; N-acetylglucosamine-6-phosphate deacetylase 126639 nagA 12609884 nagA Staphylococcus pseudintermedius ED99 N-acetylglucosamine-6-phosphate deacetylase YP_006014297.1 125485 D 984892 CDS YP_006014298.1 386318135 12609885 complement(126826..127341) 1 NC_017568.1 identified by match to protein family HMM PF04264; hypothetical protein 127341 12609885 SPSE_0112 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014298.1 126826 R 984892 CDS YP_006014299.1 386318136 12609886 127738..129801 1 NC_017568.1 identified by match to protein family HMM PF00358, match to protein family HMM PF00367, match to protein family HMM PF02378, match to protein family HMM TIGR00826, match to protein family HMM TIGR00830, match to protein family HMM TIGR02002; PTS system glucose-specific transporter subunit IIBC 129801 12609886 SPSE_0113 Staphylococcus pseudintermedius ED99 PTS system glucose-specific transporter subunit IIBC YP_006014299.1 127738 D 984892 CDS YP_006014300.1 386318137 12609887 130242..131174 1 NC_017568.1 identified by match to protein family HMM PF00056, match to protein family HMM PF02866; L-lactate dehydrogenase 131174 12609887 SPSE_0114 Staphylococcus pseudintermedius ED99 L-lactate dehydrogenase YP_006014300.1 130242 D 984892 CDS YP_006014301.1 386318138 12609888 131206..132567 1 NC_017568.1 membrane protein 132567 12609888 SPSE_0115 Staphylococcus pseudintermedius ED99 membrane protein YP_006014301.1 131206 D 984892 CDS YP_006014302.1 386318139 12609889 132598..133365 1 NC_017568.1 identified by match to protein family HMM PF01022, match to protein family HMM PF01614, match to protein family HMM PF09339; transcriptional regulator, IclR family 133365 12609889 SPSE_0116 Staphylococcus pseudintermedius ED99 transcriptional regulator, IclR family YP_006014302.1 132598 D 984892 CDS YP_006014303.1 386318140 12609890 133625..133828 1 NC_017568.1 identified by match to protein family HMM PF01381; Cro/CI family transcriptional regulator 133828 12609890 SPSE_0117 Staphylococcus pseudintermedius ED99 Cro/CI family transcriptional regulator YP_006014303.1 133625 D 984892 CDS YP_006014304.1 386318141 12609891 133825..134550 1 NC_017568.1 membrane protein 134550 12609891 SPSE_0118 Staphylococcus pseudintermedius ED99 membrane protein YP_006014304.1 133825 D 984892 CDS YP_006014305.1 386318142 12609892 complement(134680..135723) 1 NC_017568.1 identified by match to protein family HMM PF00107, match to protein family HMM PF08240; zinc-binding alcohol dehydrogenase 135723 12609892 SPSE_0119 Staphylococcus pseudintermedius ED99 zinc-binding alcohol dehydrogenase YP_006014305.1 134680 R 984892 CDS YP_006014306.1 386318143 12609893 136115..136873 1 NC_017568.1 hypothetical protein 136873 12609893 SPSE_0120 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014306.1 136115 D 984892 CDS YP_006014307.1 386318144 12609894 136895..138082 1 NC_017568.1 identified by match to protein family HMM PF01381, match to protein family HMM PF06114; hypothetical protein 138082 12609894 SPSE_0121 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014307.1 136895 D 984892 CDS YP_006014308.1 386318145 12609895 complement(138177..139781) 1 NC_017568.1 identified by match to protein family HMM PF02652, match to protein family HMM PF03600; L-lactate permease 139781 12609895 SPSE_0122 Staphylococcus pseudintermedius ED99 L-lactate permease YP_006014308.1 138177 R 984892 CDS YP_006014309.1 386318146 12609896 140249..140926 1 NC_017568.1 identified by match to protein family HMM TIGR00347; dethiobiotin synthase 140926 bioD 12609896 bioD Staphylococcus pseudintermedius ED99 dethiobiotin synthase YP_006014309.1 140249 D 984892 CDS YP_006014310.1 386318147 12609897 140916..142268 1 NC_017568.1 identified by match to protein family HMM PF00202, match to protein family HMM TIGR00508; adenosylmethionine-8-amino-7-oxononanoate transaminase 142268 bioA 12609897 bioA Staphylococcus pseudintermedius ED99 adenosylmethionine-8-amino-7-oxononanoate transaminase YP_006014310.1 140916 D 984892 CDS YP_006014311.1 386318148 12609898 142271..143389 1 NC_017568.1 identified by match to protein family HMM PF00155; 8-amino-7-oxononanoate synthase 143389 bioF 12609898 bioF Staphylococcus pseudintermedius ED99 8-amino-7-oxononanoate synthase YP_006014311.1 142271 D 984892 CDS YP_006014312.1 386318149 12609899 143392..144084 1 NC_017568.1 identified by match to protein family HMM PF03744; 6-carboxyhexanoate--CoA ligase 144084 bioW 12609899 bioW Staphylococcus pseudintermedius ED99 6-carboxyhexanoate--CoA ligase YP_006014312.1 143392 D 984892 CDS YP_006014313.1 386318150 12609900 144352..145386 1 NC_017568.1 identified by match to protein family HMM PF00728; hypothetical protein 145386 12609900 SPSE_0127 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014313.1 144352 D 984892 CDS YP_006014314.1 386318151 12609901 complement(145383..146441) 1 NC_017568.1 intercellular adhesion protein C 146441 icaC 12609901 icaC Staphylococcus pseudintermedius ED99 intercellular adhesion protein C YP_006014314.1 145383 R 984892 CDS YP_006014315.1 386318152 12609902 complement(146428..147294) 1 NC_017568.1 identified by match to protein family HMM PF01522; intercellular adhesion protein B 147294 icaB 12609902 icaB Staphylococcus pseudintermedius ED99 intercellular adhesion protein B YP_006014315.1 146428 R 984892 CDS YP_006014316.1 386318153 12609903 complement(147278..147499) 1 NC_017568.1 intercellular adhesion protein D 147499 icaD 12609903 icaD Staphylococcus pseudintermedius ED99 intercellular adhesion protein D YP_006014316.1 147278 R 984892 CDS YP_006014317.1 386318154 12609904 complement(147571..148797) 1 NC_017568.1 identified by match to protein family HMM PF00535, match to protein family HMM PF03142; intercellular adhesion protein A 148797 icaA 12609904 icaA Staphylococcus pseudintermedius ED99 intercellular adhesion protein A YP_006014317.1 147571 R 984892 CDS YP_006014318.1 386318155 12609905 complement(148895..149776) 1 NC_017568.1 hypothetical protein 149776 12609905 SPSE_0132 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014318.1 148895 R 984892 CDS YP_006014319.1 386318156 12609906 complement(150143..150268) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 150268 12609906 SPSE_0133 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014319.1 150143 R 984892 CDS YP_006014320.1 386318157 12609907 complement(150349..150873) 1 NC_017568.1 identified by match to protein family HMM PF04173, match to protein family HMM PF07681; DoxX family protein 150873 12609907 SPSE_0134 Staphylococcus pseudintermedius ED99 DoxX family protein YP_006014320.1 150349 R 984892 CDS YP_006014321.1 386318158 12609908 complement(151257..151883) 1 NC_017568.1 identified by match to protein family HMM PF02525; FMN-dependent NADH-azoreductase 151883 azoR 12609908 azoR Staphylococcus pseudintermedius ED99 FMN-dependent NADH-azoreductase YP_006014321.1 151257 R 984892 CDS YP_006014322.1 386318159 12609909 152143..152835 1 NC_017568.1 identified by match to protein family HMM PF02517; metal-dependent membrane protease 152835 12609909 SPSE_0136 Staphylococcus pseudintermedius ED99 metal-dependent membrane protease YP_006014322.1 152143 D 984892 CDS YP_006014323.1 386318160 12609910 153097..153513 1 NC_017568.1 identified by match to protein family HMM PF01037; AsnC family transcriptional regulator 153513 12609910 SPSE_0137 Staphylococcus pseudintermedius ED99 AsnC family transcriptional regulator YP_006014323.1 153097 D 984892 CDS YP_006014324.1 386318161 12609911 complement(153598..155025) 1 NC_017568.1 identified by match to protein family HMM PF00282; pyridoxal-dependent decarboxylase domain-containing protein 155025 12609911 SPSE_0138 Staphylococcus pseudintermedius ED99 pyridoxal-dependent decarboxylase domain-containing protein YP_006014324.1 153598 R 984892 CDS YP_006014325.1 386318162 12609912 complement(155288..155596) 1 NC_017568.1 hypothetical protein 155596 12609912 SPSE_0139 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014325.1 155288 R 984892 CDS YP_006014326.1 386318163 12609913 complement(155971..156405) 1 NC_017568.1 identified by match to protein family HMM PF00011; small heat shock protein 156405 12609913 SPSE_0140 Staphylococcus pseudintermedius ED99 small heat shock protein YP_006014326.1 155971 R 984892 CDS YP_006014327.1 386318164 12609914 156852..157382 1 NC_017568.1 hypothetical protein 157382 12609914 SPSE_0141 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014327.1 156852 D 984892 CDS YP_006014328.1 386318165 12609915 157630..159120 1 NC_017568.1 identified by match to protein family HMM PF00199; catalase 159120 katA 12609915 katA Staphylococcus pseudintermedius ED99 catalase YP_006014328.1 157630 D 984892 CDS YP_006014329.1 386318166 12609916 159336..159659 1 NC_017568.1 hypothetical protein 159659 12609916 SPSE_0143 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014329.1 159336 D 984892 CDS YP_006014330.1 386318167 12609917 159781..160227 1 NC_017568.1 identified by match to protein family HMM PF00210; metalloregulation DNA-binding stress protein 160227 12609917 SPSE_0144 Staphylococcus pseudintermedius ED99 metalloregulation DNA-binding stress protein YP_006014330.1 159781 D 984892 CDS YP_006014331.1 386318168 12609918 160589..160675 1 NC_017568.1 hypothetical protein 160675 12609918 SPSE_0145 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014331.1 160589 D 984892 CDS YP_006014332.1 386318169 12609919 complement(161109..161225) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 161225 12609919 SPSE_0146 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014332.1 161109 R 984892 CDS YP_006014333.1 386318170 12609920 161194..162570 1 NC_017568.1 identified by match to protein family HMM PF00474; sodium:solute symporter family protein 162570 12609920 SPSE_0147 Staphylococcus pseudintermedius ED99 sodium:solute symporter family protein YP_006014333.1 161194 D 984892 CDS YP_006014334.1 386318171 12609921 162633..163790 1 NC_017568.1 identified by match to protein family HMM PF00155; putative aminotransferase 163790 12609921 SPSE_0148 Staphylococcus pseudintermedius ED99 putative aminotransferase YP_006014334.1 162633 D 984892 CDS YP_006014335.1 386318172 12609922 164013..165608 1 NC_017568.1 identified by match to protein family HMM PF00370; FGGY family carbohydrate kinase 165608 12609922 SPSE_0149 Staphylococcus pseudintermedius ED99 FGGY family carbohydrate kinase YP_006014335.1 164013 D 984892 CDS YP_006014336.1 386318173 12609923 165850..166959 1 NC_017568.1 identified by match to protein family HMM PF07992; pyridine nucleotide-disulfide oxidoreductase family protein 166959 12609923 SPSE_0150 Staphylococcus pseudintermedius ED99 pyridine nucleotide-disulfide oxidoreductase family protein YP_006014336.1 165850 D 984892 CDS YP_006014337.1 386318174 12609924 166953..168287 1 NC_017568.1 identified by match to protein family HMM PF07670; membrane protein 168287 12609924 SPSE_0151 Staphylococcus pseudintermedius ED99 membrane protein YP_006014337.1 166953 D 984892 CDS YP_006014338.1 386318175 12609925 168419..169468 1 NC_017568.1 identified by match to protein family HMM PF02687; ABC transporter permease 169468 12609925 SPSE_0152 Staphylococcus pseudintermedius ED99 ABC transporter permease YP_006014338.1 168419 D 984892 CDS YP_006014339.1 386318176 12609926 169481..170143 1 NC_017568.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 170143 12609926 SPSE_0153 Staphylococcus pseudintermedius ED99 ABC transporter ATP-binding protein YP_006014339.1 169481 D 984892 CDS YP_006014340.1 386318177 12609927 170230..170652 1 NC_017568.1 identified by match to protein family HMM PF02082; transcriptional regulator 170652 12609927 SPSE_0154 Staphylococcus pseudintermedius ED99 transcriptional regulator YP_006014340.1 170230 D 984892 CDS YP_006014341.1 386318178 12609928 170653..171978 1 NC_017568.1 identified by match to protein family HMM PF00070, match to protein family HMM PF01266, match to protein family HMM PF02852, match to protein family HMM PF07992; pyridine nucleotide-disulfide oxidoreductase protein 171978 12609928 SPSE_0155 Staphylococcus pseudintermedius ED99 pyridine nucleotide-disulfide oxidoreductase protein YP_006014341.1 170653 D 984892 CDS YP_006014342.1 386318179 12609929 172531..173811 1 NC_017568.1 identified by match to protein family HMM PF00078, match to protein family HMM PF08388; RNA-directed DNA polymerase 173811 12609929 SPSE_0156 Staphylococcus pseudintermedius ED99 RNA-directed DNA polymerase YP_006014342.1 172531 D 984892 CDS YP_006014343.1 386318180 12609930 175035..175841 1 NC_017568.1 identified by match to protein family HMM PF00797; N-acetyltransferase family protein 175841 12609930 SPSE_0157 Staphylococcus pseudintermedius ED99 N-acetyltransferase family protein YP_006014343.1 175035 D 984892 CDS YP_006014344.1 386318181 12609931 complement(176135..176629) 1 NC_017568.1 identified by match to protein family HMM PF04140; hypothetical protein 176629 12609931 SPSE_0158 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014344.1 176135 R 984892 CDS YP_006014345.1 386318182 12609932 176882..178786 1 NC_017568.1 identified by match to protein family HMM PF04650, match to protein family HMM TIGR01168; triacylglycerol lipase 178786 lip 12609932 lip Staphylococcus pseudintermedius ED99 triacylglycerol lipase YP_006014345.1 176882 D 984892 CDS YP_006014346.1 386318183 12609933 178980..179237 1 NC_017568.1 identified by match to protein family HMM PF02604, match to protein family HMM TIGR01552; addiction module antitoxin, Axe family 179237 12609933 SPSE_0160 Staphylococcus pseudintermedius ED99 addiction module antitoxin, Axe family YP_006014346.1 178980 D 984892 CDS YP_006014347.1 386318184 12609934 179237..179503 1 NC_017568.1 identified by match to protein family HMM TIGR02116; Txe/YoeB family addiction module toxin 179503 12609934 SPSE_0161 Staphylococcus pseudintermedius ED99 Txe/YoeB family addiction module toxin YP_006014347.1 179237 D 984892 CDS YP_006014348.1 386318185 12609935 complement(179732..179860) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 179860 12609935 SPSE_0162 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014348.1 179732 R 984892 CDS YP_006014349.1 386318186 12609936 complement(179979..181472) 1 NC_017568.1 identified by match to protein family HMM PF01266, match to protein family HMM PF06039, match to protein family HMM TIGR01320; malate:quinone-oxidoreductase 2 181472 mqo2 12609936 mqo2 Staphylococcus pseudintermedius ED99 malate:quinone-oxidoreductase 2 YP_006014349.1 179979 R 984892 CDS YP_006014350.1 386318187 12609937 182229..192737 1 NC_017568.1 identified by match to protein family HMM PF00746, match to protein family HMM TIGR01167, match to protein family HMM TIGR03715; LPXTG-motif cell wall anchor domain-containing protein 192737 spsJ 12609937 spsJ Staphylococcus pseudintermedius ED99 LPXTG-motif cell wall anchor domain-containing protein YP_006014350.1 182229 D 984892 CDS YP_006014351.1 386318188 12609938 192846..194069 1 NC_017568.1 identified by match to protein family HMM PF00344, match to protein family HMM TIGR02920; accessory Sec system translocase SecY2 194069 secY2 12609938 secY2 Staphylococcus pseudintermedius ED99 accessory Sec system translocase SecY2 YP_006014351.1 192846 D 984892 CDS YP_006014352.1 386318189 12609939 194080..195645 1 NC_017568.1 identified by match to protein family HMM TIGR03713; accessory Sec system protein Asp1 195645 asp1 12609939 asp1 Staphylococcus pseudintermedius ED99 accessory Sec system protein Asp1 YP_006014352.1 194080 D 984892 CDS YP_006014353.1 386318190 12609940 195629..197173 1 NC_017568.1 identified by match to protein family HMM TIGR03712; accessory Sec system protein Asp2 197173 asp2 12609940 asp2 Staphylococcus pseudintermedius ED99 accessory Sec system protein Asp2 YP_006014353.1 195629 D 984892 CDS YP_006014354.1 386318191 12609941 197163..198089 1 NC_017568.1 identified by match to protein family HMM TIGR03711; accessory Sec system protein Asp3 198089 asp3 12609941 asp3 Staphylococcus pseudintermedius ED99 accessory Sec system protein Asp3 YP_006014354.1 197163 D 984892 CDS YP_006014355.1 386318192 12609942 198086..200473 1 NC_017568.1 identified by match to protein family HMM PF01043, match to protein family HMM PF07516, match to protein family HMM PF07517, match to protein family HMM TIGR03714; accessory Sec system translocase SecA2 200473 secA2 12609942 secA2 Staphylococcus pseudintermedius ED99 accessory Sec system translocase SecA2 YP_006014355.1 198086 D 984892 CDS YP_006014356.1 386318193 12609943 200489..201997 1 NC_017568.1 identified by match to protein family HMM PF00534, match to protein family HMM PF09318, match to protein family HMM TIGR02918; accessory Sec system glycosylation protein GtfA 201997 gtfA1 12609943 gtfA1 Staphylococcus pseudintermedius ED99 accessory Sec system glycosylation protein GtfA YP_006014356.1 200489 D 984892 CDS YP_006014357.1 386318194 12609944 201990..203321 1 NC_017568.1 identified by match to protein family HMM TIGR02919; accessory Sec system glycosyltransferase GtfB 203321 gtfB 12609944 gtfB Staphylococcus pseudintermedius ED99 accessory Sec system glycosyltransferase GtfB YP_006014357.1 201990 D 984892 CDS YP_006014358.1 386318195 12609945 complement(203383..204564) 1 NC_017568.1 identified by match to protein family HMM PF00108, match to protein family HMM PF02803, match to protein family HMM TIGR01930; acetyl-CoA acyltransferase A 204564 12609945 SPSE_0172 Staphylococcus pseudintermedius ED99 acetyl-CoA acyltransferase A YP_006014358.1 203383 R 984892 CDS YP_006014359.1 386318196 12609946 complement(204588..206849) 1 NC_017568.1 identified by match to protein family HMM PF00378, match to protein family HMM PF00725, match to protein family HMM PF02737; 3-hydroxyacyl-CoA dehydrogenase 206849 12609946 SPSE_0173 Staphylococcus pseudintermedius ED99 3-hydroxyacyl-CoA dehydrogenase YP_006014359.1 204588 R 984892 CDS YP_006014360.1 386318197 12609947 complement(206895..208106) 1 NC_017568.1 identified by match to protein family HMM PF00441, match to protein family HMM PF02770, match to protein family HMM PF08028; acyl-CoA dehydrogenase 208106 12609947 SPSE_0174 Staphylococcus pseudintermedius ED99 acyl-CoA dehydrogenase YP_006014360.1 206895 R 984892 CDS YP_006014361.1 386318198 12609948 complement(208143..209657) 1 NC_017568.1 identified by match to protein family HMM PF00501; acyl-CoA synthetase 209657 12609948 SPSE_0175 Staphylococcus pseudintermedius ED99 acyl-CoA synthetase YP_006014361.1 208143 R 984892 CDS YP_006014362.1 386318199 12609949 complement(209676..211247) 1 NC_017568.1 identified by match to protein family HMM PF01144; propionate CoA-transferase 211247 12609949 SPSE_0176 Staphylococcus pseudintermedius ED99 propionate CoA-transferase YP_006014362.1 209676 R 984892 CDS YP_006014363.1 386318200 12609950 complement(211535..212707) 1 NC_017568.1 identified by match to protein family HMM PF07690; major facilitator family transporter 212707 12609950 SPSE_0177 Staphylococcus pseudintermedius ED99 major facilitator family transporter YP_006014363.1 211535 R 984892 CDS YP_006014364.1 386318201 12609951 complement(213052..214095) 1 NC_017568.1 acyl-CoA dehydrogenase 214095 12609951 SPSE_0178 Staphylococcus pseudintermedius ED99 acyl-CoA dehydrogenase YP_006014364.1 213052 R 984892 CDS YP_006014365.1 386318202 12609952 complement(214115..214879) 1 NC_017568.1 identified by match to protein family HMM PF00528; ABC transporter permease 214879 12609952 SPSE_0179 Staphylococcus pseudintermedius ED99 ABC transporter permease YP_006014365.1 214115 R 984892 CDS YP_006014366.1 386318203 12609953 complement(214885..215832) 1 NC_017568.1 putative lipoprotein 215832 12609953 SPSE_0180 Staphylococcus pseudintermedius ED99 putative lipoprotein YP_006014366.1 214885 R 984892 CDS YP_006014367.1 386318204 12609954 complement(215846..216586) 1 NC_017568.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 216586 12609954 SPSE_0181 Staphylococcus pseudintermedius ED99 ABC transporter ATP-binding protein YP_006014367.1 215846 R 984892 CDS YP_006014368.1 386318205 12609955 complement(216757..217269) 1 NC_017568.1 hypothetical protein 217269 12609955 SPSE_0182 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014368.1 216757 R 984892 CDS YP_006014369.1 386318206 12609956 217496..217951 1 NC_017568.1 topology modulation protein 217951 12609956 SPSE_0183 Staphylococcus pseudintermedius ED99 topology modulation protein YP_006014369.1 217496 D 984892 CDS YP_006014370.1 386318207 12609957 complement(218290..218805) 1 NC_017568.1 identified by match to protein family HMM PF00578, match to protein family HMM PF08534; putative peroxiredoxin 218805 12609957 SPSE_0184 Staphylococcus pseudintermedius ED99 putative peroxiredoxin YP_006014370.1 218290 R 984892 CDS YP_006014371.1 386318208 12609958 219075..220046 1 NC_017568.1 identified by match to protein family HMM PF00356, match to protein family HMM PF00532; ribose operon repressor 220046 rbsR 12609958 rbsR Staphylococcus pseudintermedius ED99 ribose operon repressor YP_006014371.1 219075 D 984892 CDS YP_006014372.1 386318209 12609959 220046..220930 1 NC_017568.1 identified by match to protein family HMM PF00294, match to protein family HMM TIGR02152; ribokinase 220930 rbsK 12609959 rbsK Staphylococcus pseudintermedius ED99 ribokinase YP_006014372.1 220046 D 984892 CDS YP_006014373.1 386318210 12609960 221052..221312 1 NC_017568.1 identified by match to protein family HMM PF05025; ribose ABC transporter permease protein, point mutation 221312 12609960 SPSE_0187 Staphylococcus pseudintermedius ED99 ribose ABC transporter permease protein, point mutation YP_006014373.1 221052 D 984892 CDS YP_006014374.1 386318211 12609961 221904..222023 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 222023 12609961 SPSE_0188 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014374.1 221904 D 984892 CDS YP_006014375.1 386318212 12609962 223315..223767 1 NC_017568.1 lipoprotein 223767 12609962 SPSE_0189 Staphylococcus pseudintermedius ED99 lipoprotein YP_006014375.1 223315 D 984892 CDS YP_006014376.1 386318213 12609963 223807..224265 1 NC_017568.1 identified by match to protein family HMM PF07681; DoxX family protein 224265 12609963 SPSE_0190 Staphylococcus pseudintermedius ED99 DoxX family protein YP_006014376.1 223807 D 984892 CDS YP_006014377.1 386318214 12609964 224243..224929 1 NC_017568.1 identified by match to protein family HMM PF00072, match to protein family HMM PF00486; two-component response regulator SaeR 224929 saeR 12609964 saeR Staphylococcus pseudintermedius ED99 two-component response regulator SaeR YP_006014377.1 224243 D 984892 CDS YP_006014378.1 386318215 12609965 224930..225964 1 NC_017568.1 identified by match to protein family HMM PF00512, match to protein family HMM PF00672, match to protein family HMM PF02518; signal transduction histidine kinase SaeS 225964 saeS 12609965 saeS Staphylococcus pseudintermedius ED99 signal transduction histidine kinase SaeS YP_006014378.1 224930 D 984892 CDS YP_006014379.1 386318216 12609966 226480..228414 1 NC_017568.1 identified by match to protein family HMM PF00359, match to protein family HMM PF00874, match to protein family HMM PF02302, match to protein family HMM PF08279; PTS multidomain regulator 228414 12609966 SPSE_0193 Staphylococcus pseudintermedius ED99 PTS multidomain regulator YP_006014379.1 226480 D 984892 CDS YP_006014380.1 386318217 12609967 228427..228876 1 NC_017568.1 identified by match to protein family HMM PF00359; PTS system transporter subunit IIA 228876 12609967 SPSE_0194 Staphylococcus pseudintermedius ED99 PTS system transporter subunit IIA YP_006014380.1 228427 D 984892 CDS YP_006014381.1 386318218 12609968 228873..229157 1 NC_017568.1 identified by match to protein family HMM PF02302; PTS family porter component IIB 229157 12609968 SPSE_0195 Staphylococcus pseudintermedius ED99 PTS family porter component IIB YP_006014381.1 228873 D 984892 CDS YP_006014382.1 386318219 12609969 229176..230537 1 NC_017568.1 identified by match to protein family HMM PF04215; PTS system ascorbate-specific transporter subunit IIC 230537 12609969 SPSE_0196 Staphylococcus pseudintermedius ED99 PTS system ascorbate-specific transporter subunit IIC YP_006014382.1 229176 D 984892 CDS YP_006014383.1 386318220 12609970 complement(230886..231014) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 231014 12609970 SPSE_0197 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014383.1 230886 R 984892 CDS YP_006014384.1 386318221 12609971 231592..233442 1 NC_017568.1 identified by match to protein family HMM PF01228, match to protein family HMM TIGR02487; anaerobic ribonucleoside-triphosphate reductase 233442 nrdD 12609971 nrdD Staphylococcus pseudintermedius ED99 anaerobic ribonucleoside-triphosphate reductase YP_006014384.1 231592 D 984892 CDS YP_006014385.1 386318222 12609972 233439..233978 1 NC_017568.1 identified by match to protein family HMM TIGR02491; anaerobic ribonucleoside-triphosphate reductase activating protein 233978 nrdG 12609972 nrdG Staphylococcus pseudintermedius ED99 anaerobic ribonucleoside-triphosphate reductase activating protein YP_006014385.1 233439 D 984892 CDS YP_006014386.1 386318223 12609973 234338..235615 1 NC_017568.1 identified by match to protein family HMM PF01053, match to protein family HMM TIGR01326; O-acetylhomoserine (thiol)-lyase 235615 cysD 12609973 cysD Staphylococcus pseudintermedius ED99 O-acetylhomoserine (thiol)-lyase YP_006014386.1 234338 D 984892 CDS YP_006014387.1 386318224 12609974 complement(235618..235737) 1 NC_017568.1 hypothetical protein 235737 12609974 SPSE_0202 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014387.1 235618 R 984892 CDS YP_006014388.1 386318225 12609975 235918..237297 1 NC_017568.1 putative monooxygenase 237297 12609975 SPSE_0204 Staphylococcus pseudintermedius ED99 putative monooxygenase YP_006014388.1 235918 D 984892 CDS YP_006014389.1 386318226 12609976 237308..238804 1 NC_017568.1 identified by match to protein family HMM PF00474; sodium:pantothenate symporter 238804 12609976 SPSE_0205 Staphylococcus pseudintermedius ED99 sodium:pantothenate symporter YP_006014389.1 237308 D 984892 CDS YP_006014390.1 386318227 12609977 238804..238920 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 238920 12609977 SPSE_0206 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014390.1 238804 D 984892 CDS YP_006014391.1 386318228 12609978 238920..239309 1 NC_017568.1 malonate semialdehyde decarboxylase 239309 12609978 SPSE_0207 Staphylococcus pseudintermedius ED99 malonate semialdehyde decarboxylase YP_006014391.1 238920 D 984892 CDS YP_006014392.1 386318229 12609979 239647..240366 1 NC_017568.1 identified by match to protein family HMM PF01965; ThiJ/PfpI family protein 240366 12609979 SPSE_0208 Staphylococcus pseudintermedius ED99 ThiJ/PfpI family protein YP_006014392.1 239647 D 984892 CDS YP_006014393.1 386318230 12609980 240642..242279 1 NC_017568.1 identified by match to protein family HMM PF01297, match to protein family HMM PF09223; zinc-binding lipoprotein 242279 12609980 SPSE_0209 Staphylococcus pseudintermedius ED99 zinc-binding lipoprotein YP_006014393.1 240642 D 984892 CDS YP_006014394.1 386318231 12609981 complement(242772..243662) 1 NC_017568.1 identified by match to protein family HMM PF00274; fructose-bisphosphate aldolase 243662 fda 12609981 fda Staphylococcus pseudintermedius ED99 fructose-bisphosphate aldolase YP_006014394.1 242772 R 984892 CDS YP_006014395.1 386318232 12609982 complement(244069..244755) 1 NC_017568.1 identified by match to protein family HMM PF03306; alpha-acetolactate decarboxylase superfamily 244755 12609982 SPSE_0211 Staphylococcus pseudintermedius ED99 alpha-acetolactate decarboxylase superfamily YP_006014395.1 244069 R 984892 CDS YP_006014396.1 386318233 12609983 complement(245247..246182) 1 NC_017568.1 identified by match to protein family HMM PF02558, match to protein family HMM PF08546, match to protein family HMM TIGR00745; 2-dehydropantoate 2-reductase 246182 12609983 SPSE_0212 Staphylococcus pseudintermedius ED99 2-dehydropantoate 2-reductase YP_006014396.1 245247 R 984892 CDS YP_006014397.1 386318234 12609984 246452..247831 1 NC_017568.1 identified by match to protein family HMM PF07690; MFS family major facilitator transporter, hexose phosphate:cation symporter 247831 12609984 SPSE_0213 Staphylococcus pseudintermedius ED99 MFS family major facilitator transporter, hexose phosphate:cation symporter YP_006014397.1 246452 D 984892 CDS YP_006014398.1 386318235 12609985 complement(248034..248777) 1 NC_017568.1 identified by match to protein family HMM PF00072, match to protein family HMM PF00165; two component transcriptional regulator, AraC family 248777 12609985 SPSE_0214 Staphylococcus pseudintermedius ED99 two component transcriptional regulator, AraC family YP_006014398.1 248034 R 984892 CDS YP_006014399.1 386318236 12609986 complement(248770..250323) 1 NC_017568.1 identified by match to protein family HMM PF06580; two-component sensor histidine kinase 250323 12609986 SPSE_0215 Staphylococcus pseudintermedius ED99 two-component sensor histidine kinase YP_006014399.1 248770 R 984892 CDS YP_006014400.1 386318237 12609987 complement(250320..251273) 1 NC_017568.1 identified by match to protein family HMM PF01547; periplasmic iron binding protein 251273 12609987 SPSE_0216 Staphylococcus pseudintermedius ED99 periplasmic iron binding protein YP_006014400.1 250320 R 984892 CDS YP_006014401.1 386318238 12609988 251652..252515 1 NC_017568.1 identified by match to protein family HMM PF00483, match to protein family HMM TIGR01099; UTP-glucose-1-phosphate uridylyltransferase 252515 galU 12609988 galU Staphylococcus pseudintermedius ED99 UTP-glucose-1-phosphate uridylyltransferase YP_006014401.1 251652 D 984892 CDS YP_006014402.1 386318239 12609989 252705..254012 1 NC_017568.1 identified by match to protein family HMM PF03605; anaerobic C4-dicarboxylate transporter 254012 12609989 SPSE_0218 Staphylococcus pseudintermedius ED99 anaerobic C4-dicarboxylate transporter YP_006014402.1 252705 D 984892 CDS YP_006014403.1 386318240 12609990 complement(254168..255358) 1 NC_017568.1 identified by match to protein family HMM PF06779, match to protein family HMM PF07690; major facilitator family transporter 255358 12609990 SPSE_0219 Staphylococcus pseudintermedius ED99 major facilitator family transporter YP_006014403.1 254168 R 984892 CDS YP_006014404.1 386318241 12609991 255877..257256 1 NC_017568.1 identified by match to protein family HMM TIGR00792; lactose permease 257256 lacP 12609991 lacP Staphylococcus pseudintermedius ED99 lactose permease YP_006014404.1 255877 D 984892 CDS YP_006014405.1 386318242 12609992 257285..260281 1 NC_017568.1 identified by match to protein family HMM PF00703, match to protein family HMM PF02836, match to protein family HMM PF02837, match to protein family HMM PF02929; beta-galactosidase 260281 lacZ 12609992 lacZ Staphylococcus pseudintermedius ED99 beta-galactosidase YP_006014405.1 257285 D 984892 CDS YP_006014406.1 386318243 12609993 complement(260395..261342) 1 NC_017568.1 identified by match to protein family HMM PF01156; inosine-uridine preferring nucleoside hydrolase family protein 261342 12609993 SPSE_0222 Staphylococcus pseudintermedius ED99 inosine-uridine preferring nucleoside hydrolase family protein YP_006014406.1 260395 R 984892 CDS YP_006014407.1 386318244 12609994 complement(261538..262380) 1 NC_017568.1 identified by match to protein family HMM PF00561; putative lysophospholipase 262380 12609994 SPSE_0223 Staphylococcus pseudintermedius ED99 putative lysophospholipase YP_006014407.1 261538 R 984892 CDS YP_006014408.1 386318245 12609995 262526..264016 1 NC_017568.1 identified by match to protein family HMM PF00614; cardiolipin synthetase 264016 cls1 12609995 cls1 Staphylococcus pseudintermedius ED99 cardiolipin synthetase YP_006014408.1 262526 D 984892 CDS YP_006014409.1 386318246 12609996 264133..264309 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 264309 12609996 SPSE_0225 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014409.1 264133 D 984892 CDS YP_006014410.1 386318247 12609997 264784..266520 1 NC_017568.1 identified by match to protein family HMM PF01964, match to protein family HMM TIGR00190; thiamine biosynthesis protein ThiC 266520 thiC 12609997 thiC Staphylococcus pseudintermedius ED99 thiamine biosynthesis protein ThiC YP_006014410.1 264784 D 984892 CDS YP_006014411.1 386318248 12609998 266734..267744 1 NC_017568.1 identified by match to protein family HMM PF03824, match to protein family HMM TIGR00802; high-affinity nickel transport protein 267744 hoxN 12609998 hoxN Staphylococcus pseudintermedius ED99 high-affinity nickel transport protein YP_006014411.1 266734 D 984892 CDS YP_006014412.1 386318249 12609999 complement(267898..269076) 1 NC_017568.1 identified by match to protein family HMM PF07690; putative transporter, major facilitator family 269076 12609999 SPSE_0229 Staphylococcus pseudintermedius ED99 putative transporter, major facilitator family YP_006014412.1 267898 R 984892 CDS YP_006014413.1 386318250 12610000 269185..269733 1 NC_017568.1 identified by match to protein family HMM PF01381, match to protein family HMM PF07883; transcriptional regulator 269733 12610000 SPSE_0230 Staphylococcus pseudintermedius ED99 transcriptional regulator YP_006014413.1 269185 D 984892 CDS YP_006014414.1 386318251 12610001 269842..270429 1 NC_017568.1 identified by match to protein family HMM PF00717, match to protein family HMM TIGR02227; signal peptidase I 270429 12610001 SPSE_0231 Staphylococcus pseudintermedius ED99 signal peptidase I YP_006014414.1 269842 D 984892 CDS YP_006014415.1 386318252 12610002 complement(270583..271218) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 271218 12610002 SPSE_0232 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014415.1 270583 R 984892 CDS YP_006014416.1 386318253 12610003 271666..273087 1 NC_017568.1 identified by match to protein family HMM PF00245; alkaline phosphatase III 273087 phoB 12610003 phoB Staphylococcus pseudintermedius ED99 alkaline phosphatase III YP_006014416.1 271666 D 984892 CDS YP_006014417.1 386318254 12610004 273240..273632 1 NC_017568.1 identified by match to protein family HMM PF00293; MutT/nudix family protein 273632 12610004 SPSE_0234 Staphylococcus pseudintermedius ED99 MutT/nudix family protein YP_006014417.1 273240 D 984892 CDS YP_006014418.1 386318255 12610005 273637..276501 1 NC_017568.1 identified by match to protein family HMM PF00270, match to protein family HMM PF00271, match to protein family HMM PF04851; putative helicase 276501 12610005 SPSE_0235 Staphylococcus pseudintermedius ED99 putative helicase YP_006014418.1 273637 D 984892 CDS YP_006014419.1 386318256 12610006 276663..277985 1 NC_017568.1 identified by match to protein family HMM PF01566, match to protein family HMM TIGR01197; NRAMP family Mn2+/Fe2+ transporter 277985 12610006 SPSE_0236 Staphylococcus pseudintermedius ED99 NRAMP family Mn2+/Fe2+ transporter YP_006014419.1 276663 D 984892 CDS YP_006014420.1 386318257 12610007 278377..280002 1 NC_017568.1 identified by match to protein family HMM PF02028, match to protein family HMM TIGR00842; choline transporter 280002 12610007 SPSE_0237 Staphylococcus pseudintermedius ED99 choline transporter YP_006014420.1 278377 D 984892 CDS YP_006014421.1 386318258 12610008 280219..280314 1 NC_017568.1 hypothetical protein 280314 12610008 SPSE_0238 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014421.1 280219 D 984892 CDS YP_006014422.1 386318259 12610009 complement(281038..281589) 1 NC_017568.1 putative transcriptional regulator 281589 12610009 SPSE_0239 Staphylococcus pseudintermedius ED99 putative transcriptional regulator YP_006014422.1 281038 R 984892 CDS YP_006014423.1 386318260 12610010 281811..283304 1 NC_017568.1 identified by match to protein family HMM PF00171, match to protein family HMM TIGR01804; betaine aldehyde dehydrogenase 283304 betB 12610010 betB Staphylococcus pseudintermedius ED99 betaine aldehyde dehydrogenase YP_006014423.1 281811 D 984892 CDS YP_006014424.1 386318261 12610011 283432..285126 1 NC_017568.1 identified by match to protein family HMM PF00732, match to protein family HMM PF05199, match to protein family HMM TIGR01810; choline dehydrogenase 285126 betA 12610011 betA Staphylococcus pseudintermedius ED99 choline dehydrogenase YP_006014424.1 283432 D 984892 CDS YP_006014425.1 386318262 12610012 285503..286477 1 NC_017568.1 identified by match to protein family HMM PF00185, match to protein family HMM PF02729, match to protein family HMM TIGR00658; ornithine carbamoyltransferase 286477 arcB-2 12610012 arcB-2 Staphylococcus pseudintermedius ED99 ornithine carbamoyltransferase YP_006014425.1 285503 D 984892 CDS YP_006014426.1 386318263 12610013 complement(286591..287220) 1 NC_017568.1 identified by match to protein family HMM PF01502, match to protein family HMM PF01503, match to protein family HMM PF03819, match to protein family HMM TIGR03188; bifunctional; phosphoribosyl-ATP pyrophosphatase/phosphoribosyl-AMP cyclohydrolase 287220 hisIE 12610013 hisIE Staphylococcus pseudintermedius ED99 phosphoribosyl-ATP pyrophosphatase/phosphoribosyl-AMP cyclohydrolase YP_006014426.1 286591 R 984892 CDS YP_006014427.1 386318264 12610014 complement(287211..287975) 1 NC_017568.1 identified by match to protein family HMM PF00977, match to protein family HMM TIGR00735; Imidazole glycerol phosphate synthase cyclase subunit 287975 hisF 12610014 hisF Staphylococcus pseudintermedius ED99 Imidazole glycerol phosphate synthase cyclase subunit YP_006014427.1 287211 R 984892 CDS YP_006014428.1 386318265 12610015 complement(287972..288676) 1 NC_017568.1 identified by match to protein family HMM PF00977, match to protein family HMM TIGR00007; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 288676 hisA 12610015 hisA Staphylococcus pseudintermedius ED99 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase YP_006014428.1 287972 R 984892 CDS YP_006014429.1 386318266 12610016 complement(288669..289244) 1 NC_017568.1 identified by match to protein family HMM PF00117, match to protein family HMM TIGR01855; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 289244 hisH 12610016 hisH Staphylococcus pseudintermedius ED99 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit YP_006014429.1 288669 R 984892 CDS YP_006014430.1 386318267 12610017 complement(289241..289822) 1 NC_017568.1 identified by match to protein family HMM PF00475; imidazoleglycerol-phosphate dehydratase 289822 hisB 12610017 hisB Staphylococcus pseudintermedius ED99 imidazoleglycerol-phosphate dehydratase YP_006014430.1 289241 R 984892 CDS YP_006014431.1 386318268 12610018 complement(289806..290819) 1 NC_017568.1 identified by match to protein family HMM PF00155; histidinol-phosphate aminotransferase 290819 hisC 12610018 hisC Staphylococcus pseudintermedius ED99 histidinol-phosphate aminotransferase YP_006014431.1 289806 R 984892 CDS YP_006014432.1 386318269 12610019 complement(290816..292075) 1 NC_017568.1 identified by match to protein family HMM PF00815, match to protein family HMM TIGR00069; histidinol dehydrogenase 292075 hisD 12610019 hisD Staphylococcus pseudintermedius ED99 histidinol dehydrogenase YP_006014432.1 290816 R 984892 CDS YP_006014433.1 386318270 12610020 complement(292065..292679) 1 NC_017568.1 identified by match to protein family HMM PF01634, match to protein family HMM TIGR00070; ATP phosphoribosyltransferase 292679 hisG 12610020 hisG Staphylococcus pseudintermedius ED99 ATP phosphoribosyltransferase YP_006014433.1 292065 R 984892 CDS YP_006014434.1 386318271 12610021 complement(292695..293504) 1 NC_017568.1 ATP phosphoribosyltransferase regulatory subunit 293504 hisZ 12610021 hisZ Staphylococcus pseudintermedius ED99 ATP phosphoribosyltransferase regulatory subunit YP_006014434.1 292695 R 984892 CDS YP_006014435.1 386318272 12610022 293835..294497 1 NC_017568.1 identified by match to protein family HMM PF01791, match to protein family HMM TIGR00126; deoxyribose-phosphate aldolase 294497 deoC 12610022 deoC Staphylococcus pseudintermedius ED99 deoxyribose-phosphate aldolase YP_006014435.1 293835 D 984892 CDS YP_006014436.1 386318273 12610023 294531..295709 1 NC_017568.1 identified by match to protein family HMM PF01676, match to protein family HMM PF08342, match to protein family HMM TIGR01696; phosphopentomutase 295709 deoB 12610023 deoB Staphylococcus pseudintermedius ED99 phosphopentomutase YP_006014436.1 294531 D 984892 CDS YP_006014437.1 386318274 12610024 296319..302006 1 NC_017568.1 identified by match to protein family HMM PF00746, match to protein family HMM PF04650, match to protein family HMM PF08428, match to protein family HMM TIGR01167, match to protein family HMM TIGR01168, match to protein family HMM TIGR02331; LPXTG-motif cell wall anchor domain-containing protein 302006 spsF 12610024 spsF Staphylococcus pseudintermedius ED99 LPXTG-motif cell wall anchor domain-containing protein YP_006014437.1 296319 D 984892 CDS YP_006014438.1 386318275 12610025 302342..304093 1 NC_017568.1 identified by match to protein family HMM PF02518, match to protein family HMM PF06580, match to protein family HMM PF07694; signal transduction histidine kinase LytS 304093 lytS 12610025 lytS Staphylococcus pseudintermedius ED99 signal transduction histidine kinase LytS YP_006014438.1 302342 D 984892 CDS YP_006014439.1 386318276 12610026 304097..304831 1 NC_017568.1 identified by match to protein family HMM PF00072, match to protein family HMM PF04397; two-component response regulator, LytR 304831 lytR 12610026 lytR Staphylococcus pseudintermedius ED99 two-component response regulator, LytR YP_006014439.1 304097 D 984892 CDS YP_006014440.1 386318277 12610027 305631..306065 1 NC_017568.1 identified by match to protein family HMM PF03788; antiholin-like protein LrgA 306065 lrgA 12610027 lrgA Staphylococcus pseudintermedius ED99 antiholin-like protein LrgA YP_006014440.1 305631 D 984892 CDS YP_006014441.1 386318278 12610028 306058..306759 1 NC_017568.1 identified by match to protein family HMM PF04172; antiholin-like protein LrgB 306759 lrgB 12610028 lrgB Staphylococcus pseudintermedius ED99 antiholin-like protein LrgB YP_006014441.1 306058 D 984892 CDS YP_006014442.1 386318279 12610029 306926..307888 1 NC_017568.1 identified by match to protein family HMM PF02733, match to protein family HMM TIGR02363; dihydroxyacetone kinase subunit DhaK 307888 dhaK 12610029 dhaK Staphylococcus pseudintermedius ED99 dihydroxyacetone kinase subunit DhaK YP_006014442.1 306926 D 984892 CDS YP_006014443.1 386318280 12610030 307911..308492 1 NC_017568.1 identified by match to protein family HMM PF02734, match to protein family HMM TIGR02365; dihydroxyacetone kinase, DhaL subunit 308492 dhaL 12610030 dhaL Staphylococcus pseudintermedius ED99 dihydroxyacetone kinase, DhaL subunit YP_006014443.1 307911 D 984892 CDS YP_006014444.1 386318281 12610031 308489..308848 1 NC_017568.1 identified by match to protein family HMM PF03610, match to protein family HMM TIGR02364; dihydroxyacetone kinase, phosphotransfer subunit 308848 dhaM 12610031 dhaM Staphylococcus pseudintermedius ED99 dihydroxyacetone kinase, phosphotransfer subunit YP_006014444.1 308489 D 984892 CDS YP_006014445.1 386318282 12610032 complement(308915..309286) 1 NC_017568.1 identified by match to protein family HMM PF03831, match to protein family HMM TIGR00686; alkylphosphonate utilization operon protein PhnA 309286 12610032 SPSE_0262 Staphylococcus pseudintermedius ED99 alkylphosphonate utilization operon protein PhnA YP_006014445.1 308915 R 984892 CDS YP_006014446.1 386318283 12610033 309418..310806 1 NC_017568.1 identified by match to protein family HMM PF00171; succinate-semialdehyde dehydrogenase 310806 gabD 12610033 gabD Staphylococcus pseudintermedius ED99 succinate-semialdehyde dehydrogenase YP_006014446.1 309418 D 984892 CDS YP_006014447.1 386318284 12610034 310936..311238 1 NC_017568.1 hypothetical protein 311238 12610034 SPSE_0264 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014447.1 310936 D 984892 CDS YP_006014448.1 386318285 12610035 311409..311738 1 NC_017568.1 identified by match to protein family HMM PF03992; heme-degrading monooxygenase IsdI 311738 isdI 12610035 isdI Staphylococcus pseudintermedius ED99 heme-degrading monooxygenase IsdI YP_006014448.1 311409 D 984892 CDS YP_006014449.1 386318286 12610036 312364..313329 1 NC_017568.1 identified by match to protein family HMM PF00561; alpha/beta hydrolase 313329 12610036 SPSE_0266 Staphylococcus pseudintermedius ED99 alpha/beta hydrolase YP_006014449.1 312364 D 984892 CDS YP_006014450.1 386318287 12610037 313359..314081 1 NC_017568.1 identified by match to protein family HMM PF00376, match to protein family HMM PF09278; MerR family transcriptional regulator 314081 12610037 SPSE_0267 Staphylococcus pseudintermedius ED99 MerR family transcriptional regulator YP_006014450.1 313359 D 984892 CDS YP_006014451.1 386318288 12610038 complement(314041..314211) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 314211 12610038 SPSE_0268 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014451.1 314041 R 984892 CDS YP_006014452.1 386318289 12610039 314268..316190 1 NC_017568.1 identified by match to protein family HMM PF00359, match to protein family HMM PF02378, match to protein family HMM PF02379, match to protein family HMM TIGR00829, match to protein family HMM TIGR00848, match to protein family HMM TIGR01427; PTS system fructose-specific IIC component 316190 12610039 SPSE_0269 Staphylococcus pseudintermedius ED99 PTS system fructose-specific IIC component YP_006014452.1 314268 D 984892 CDS YP_006014453.1 386318290 12610040 316327..318186 1 NC_017568.1 identified by match to protein family HMM TIGR01167; LPXTG-motif cell wall anchor domain-containing protein 318186 spsA 12610040 spsA Staphylococcus pseudintermedius ED99 LPXTG-motif cell wall anchor domain-containing protein YP_006014453.1 316327 D 984892 CDS YP_006014454.1 386318291 12610041 complement(318779..320854) 1 NC_017568.1 identified by match to protein family HMM PF01832, match to protein family HMM PF05257; mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 320854 12610041 SPSE_0271 Staphylococcus pseudintermedius ED99 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase YP_006014454.1 318779 R 984892 CDS YP_006014455.1 386318292 12610042 321183..324017 1 NC_017568.1 identified by match to protein family HMM PF01061, match to protein family HMM TIGR03061, match to protein family HMM TIGR03062; membrane protein 324017 12610042 SPSE_0272 Staphylococcus pseudintermedius ED99 membrane protein YP_006014455.1 321183 D 984892 CDS YP_006014456.1 386318293 12610043 324403..325032 1 NC_017568.1 identified by match to protein family HMM PF08241, match to protein family HMM PF08242; methyltransferase type 12 325032 12610043 SPSE_0273 Staphylococcus pseudintermedius ED99 methyltransferase type 12 YP_006014456.1 324403 D 984892 CDS YP_006014457.1 386318294 12610044 325219..325947 1 NC_017568.1 identified by match to protein family HMM PF02677; hypothetical protein 325947 12610044 SPSE_0274 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014457.1 325219 D 984892 CDS YP_006014458.1 386318295 12610045 326051..327547 1 NC_017568.1 identified by match to protein family HMM PF00496; ABC transporter substrate-binding protein 327547 12610045 SPSE_0275 Staphylococcus pseudintermedius ED99 ABC transporter substrate-binding protein YP_006014458.1 326051 D 984892 CDS YP_006014459.1 386318296 12610046 327537..328523 1 NC_017568.1 identified by match to protein family HMM PF00528; oligopeptide transport system permease protein OppB 328523 12610046 SPSE_0276 Staphylococcus pseudintermedius ED99 oligopeptide transport system permease protein OppB YP_006014459.1 327537 D 984892 CDS YP_006014460.1 386318297 12610047 328520..329344 1 NC_017568.1 identified by match to protein family HMM PF00528; oligopeptide transport system permease protein 329344 12610047 SPSE_0277 Staphylococcus pseudintermedius ED99 oligopeptide transport system permease protein YP_006014460.1 328520 D 984892 CDS YP_006014461.1 386318298 12610048 329337..330113 1 NC_017568.1 identified by match to protein family HMM PF00005; oligopeptide ABC superfamily ATP binding cassette transporter, ABC protein 330113 12610048 SPSE_0278 Staphylococcus pseudintermedius ED99 oligopeptide ABC superfamily ATP binding cassette transporter, ABC protein YP_006014461.1 329337 D 984892 CDS YP_006014462.1 386318299 12610049 330106..330795 1 NC_017568.1 identified by match to protein family HMM PF00005; oligopeptide transport ATP-binding protein oppF2 330795 12610049 SPSE_0279 Staphylococcus pseudintermedius ED99 oligopeptide transport ATP-binding protein oppF2 YP_006014462.1 330106 D 984892 CDS YP_006014463.1 386318300 12610050 complement(331369..333537) 1 NC_017568.1 identified by match to protein family HMM PF00535, match to protein family HMM PF04464; teichoic acid biosynthesis protein F1 333537 tagF1 12610050 tagF1 Staphylococcus pseudintermedius ED99 teichoic acid biosynthesis protein F1 YP_006014463.1 331369 R 984892 CDS YP_006014464.1 386318301 12610051 complement(333731..335902) 1 NC_017568.1 identified by match to protein family HMM PF00535, match to protein family HMM PF04464; teichoic acid biosynthesis protein F2 335902 tagF2 12610051 tagF2 Staphylococcus pseudintermedius ED99 teichoic acid biosynthesis protein F2 YP_006014464.1 333731 R 984892 CDS YP_006014465.1 386318302 12610052 336498..337985 1 NC_017568.1 identified by match to protein family HMM PF00534, match to protein family HMM PF09318; glycoside hydrolase family protein 337985 12610052 SPSE_0282 Staphylococcus pseudintermedius ED99 glycoside hydrolase family protein YP_006014465.1 336498 D 984892 CDS YP_006014466.1 386318303 12610053 338990..339934 1 NC_017568.1 identified by match to protein family HMM PF00106, match to protein family HMM PF01073, match to protein family HMM PF01370, match to protein family HMM PF04321, match to protein family HMM PF07993; NAD dependent epimerase/dehydratase family protein 339934 12610053 SPSE_0283 Staphylococcus pseudintermedius ED99 NAD dependent epimerase/dehydratase family protein YP_006014466.1 338990 D 984892 CDS YP_006014467.1 386318304 12610054 340139..342661 1 NC_017568.1 identified by match to protein family HMM PF00534, match to protein family HMM PF04464; putative glycosyltransferase 342661 12610054 SPSE_0284 Staphylococcus pseudintermedius ED99 putative glycosyltransferase YP_006014467.1 340139 D 984892 CDS YP_006014468.1 386318305 12610055 complement(342718..344217) 1 NC_017568.1 identified by match to protein family HMM PF01970; hypothetical protein 344217 12610055 SPSE_0285 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014468.1 342718 R 984892 CDS YP_006014469.1 386318306 12610056 complement(344230..344673) 1 NC_017568.1 hypothetical protein 344673 12610056 SPSE_0286 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014469.1 344230 R 984892 CDS YP_006014470.1 386318307 12610057 complement(344692..345681) 1 NC_017568.1 identified by match to protein family HMM PF03401; putative lipoprotein 345681 12610057 SPSE_0287 Staphylococcus pseudintermedius ED99 putative lipoprotein YP_006014470.1 344692 R 984892 CDS YP_006014471.1 386318308 12610058 complement(346015..346677) 1 NC_017568.1 identified by match to protein family HMM PF00881; nitroreductase family protein 346677 12610058 SPSE_0288 Staphylococcus pseudintermedius ED99 nitroreductase family protein YP_006014471.1 346015 R 984892 CDS YP_006014472.1 386318309 12610059 346790..347653 1 NC_017568.1 identified by match to protein family HMM PF01636, match to protein family HMM PF03881; fructosamine kinase family protein 347653 12610059 SPSE_0289 Staphylococcus pseudintermedius ED99 fructosamine kinase family protein YP_006014472.1 346790 D 984892 CDS YP_006014473.1 386318310 12610060 347640..348092 1 NC_017568.1 identified by match to protein family HMM PF07853; hypothetical protein 348092 12610060 SPSE_0290 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014473.1 347640 D 984892 CDS YP_006014474.1 386318311 12610061 complement(348151..348753) 1 NC_017568.1 hypothetical protein 348753 12610061 SPSE_0291 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014474.1 348151 R 984892 CDS YP_006014475.1 386318312 12610062 348931..349572 1 NC_017568.1 hypothetical protein 349572 12610062 SPSE_0292 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014475.1 348931 D 984892 CDS YP_006014476.1 386318313 12610063 349680..350732 1 NC_017568.1 RND family efflux transporter 350732 12610063 SPSE_0293 Staphylococcus pseudintermedius ED99 RND family efflux transporter YP_006014476.1 349680 D 984892 CDS YP_006014477.1 386318314 12610064 350729..351424 1 NC_017568.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 351424 12610064 SPSE_0294 Staphylococcus pseudintermedius ED99 ABC transporter ATP-binding protein YP_006014477.1 350729 D 984892 CDS YP_006014478.1 386318315 12610065 351408..352583 1 NC_017568.1 identified by match to protein family HMM PF02687; ABC transporter permease 352583 12610065 SPSE_0295 Staphylococcus pseudintermedius ED99 ABC transporter permease YP_006014478.1 351408 D 984892 CDS YP_006014479.1 386318316 12610066 complement(353416..355503) 1 NC_017568.1 identified by match to protein family HMM PF04650, match to protein family HMM TIGR01168; triacylglycerol lipase 355503 12610066 SPSE_0296 Staphylococcus pseudintermedius ED99 triacylglycerol lipase YP_006014479.1 353416 R 984892 CDS YP_006014480.1 386318317 12610067 355699..355812 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 355812 12610067 SPSE_0297 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014480.1 355699 D 984892 CDS YP_006014481.1 386318318 12610068 complement(356431..357897) 1 NC_017568.1 identified by match to protein family HMM PF04650, match to protein family HMM TIGR01168; triacylglycerol lipase 357897 12610068 SPSE_0298 Staphylococcus pseudintermedius ED99 triacylglycerol lipase YP_006014481.1 356431 R 984892 CDS YP_006014482.1 386318319 12610069 358411..359355 1 NC_017568.1 identified by match to protein family HMM PF01545, match to protein family HMM TIGR01297; cation efflux family protein 359355 12610069 SPSE_0299 Staphylococcus pseudintermedius ED99 cation efflux family protein YP_006014482.1 358411 D 984892 CDS YP_006014483.1 386318320 12610070 complement(359525..360424) 1 NC_017568.1 identified by match to protein family HMM PF03253, match to protein family HMM TIGR03441; urea transporter family protein 360424 12610070 SPSE_0300 Staphylococcus pseudintermedius ED99 urea transporter family protein YP_006014483.1 359525 R 984892 CDS YP_006014484.1 386318321 12610071 360672..360974 1 NC_017568.1 identified by match to protein family HMM PF00547, match to protein family HMM TIGR00193; urease subunit gamma 360974 ureA 12610071 ureA Staphylococcus pseudintermedius ED99 urease subunit gamma YP_006014484.1 360672 D 984892 CDS YP_006014485.1 386318322 12610072 360987..361343 1 NC_017568.1 identified by match to protein family HMM PF00699, match to protein family HMM TIGR00192; urease subunit beta 361343 ureB 12610072 ureB Staphylococcus pseudintermedius ED99 urease subunit beta YP_006014485.1 360987 D 984892 CDS YP_006014486.1 386318323 12610073 361340..363055 1 NC_017568.1 identified by match to protein family HMM PF00449, match to protein family HMM PF01979, match to protein family HMM TIGR01792; urease subunit alpha 363055 ureC 12610073 ureC Staphylococcus pseudintermedius ED99 urease subunit alpha YP_006014486.1 361340 D 984892 CDS YP_006014487.1 386318324 12610074 363395..363940 1 NC_017568.1 identified by match to protein family HMM PF00692, match to protein family HMM TIGR02274; deoxycytidine triphosphate deaminase 363940 dcd 12610074 dcd Staphylococcus pseudintermedius ED99 deoxycytidine triphosphate deaminase YP_006014487.1 363395 D 984892 CDS YP_006014488.1 386318325 12610075 363941..364843 1 NC_017568.1 identified by match to protein family HMM PF02492, match to protein family HMM PF07683; cobalamin synthesis protein 364843 12610075 SPSE_0305 Staphylococcus pseudintermedius ED99 cobalamin synthesis protein YP_006014488.1 363941 D 984892 CDS YP_006014489.1 386318326 12610076 365142..365564 1 NC_017568.1 identified by match to protein family HMM PF00582; universal stress protein family 365564 12610076 SPSE_0306 Staphylococcus pseudintermedius ED99 universal stress protein family YP_006014489.1 365142 D 984892 CDS YP_006014490.1 386318327 12610077 365766..366032 1 NC_017568.1 ferredoxin 366032 12610077 SPSE_0307 Staphylococcus pseudintermedius ED99 ferredoxin YP_006014490.1 365766 D 984892 CDS YP_006014491.1 386318328 12610078 366032..367717 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 367717 12610078 SPSE_0308 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014491.1 366032 D 984892 CDS YP_006014492.1 386318329 12610079 367736..368983 1 NC_017568.1 identified by match to protein family HMM PF02655; hypothetical protein 368983 12610079 SPSE_0309 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014492.1 367736 D 984892 CDS YP_006014493.1 386318330 12610080 368980..370212 1 NC_017568.1 identified by match to protein family HMM PF02222, match to protein family HMM PF02655; ATP-dependent carboxylate-amine ligase domain protein 370212 12610080 SPSE_0310 Staphylococcus pseudintermedius ED99 ATP-dependent carboxylate-amine ligase domain protein YP_006014493.1 368980 D 984892 CDS YP_006014494.1 386318331 12610081 complement(370553..371788) 1 NC_017568.1 identified by match to protein family HMM PF07690; major facilitator superfamily protein 371788 12610081 SPSE_0311 Staphylococcus pseudintermedius ED99 major facilitator superfamily protein YP_006014494.1 370553 R 984892 CDS YP_006014495.1 386318332 12610082 371940..372869 1 NC_017568.1 identified by match to protein family HMM PF00126, match to protein family HMM PF03466; LysR family transcriptional regulator 372869 12610082 SPSE_0312 Staphylococcus pseudintermedius ED99 LysR family transcriptional regulator YP_006014495.1 371940 D 984892 CDS YP_006014496.1 386318333 12610083 372947..373339 1 NC_017568.1 identified by match to protein family HMM PF03788; holin-like protein CidA 373339 cidA 12610083 cidA Staphylococcus pseudintermedius ED99 holin-like protein CidA YP_006014496.1 372947 D 984892 CDS YP_006014497.1 386318334 12610084 373336..374022 1 NC_017568.1 identified by match to protein family HMM PF04172; holin-like protein CidB 374022 cidB 12610084 cidB Staphylococcus pseudintermedius ED99 holin-like protein CidB YP_006014497.1 373336 D 984892 CDS YP_006014498.1 386318335 12610085 374596..374772 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 374772 12610085 SPSE_0315 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014498.1 374596 D 984892 CDS YP_006014499.1 386318336 12610086 375035..375859 1 NC_017568.1 hypothetical protein 375859 12610086 SPSE_0316 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014499.1 375035 D 984892 CDS YP_006014500.1 386318337 12610087 complement(376079..376528) 1 NC_017568.1 identified by match to protein family HMM PF01047; MarR family transcriptional regulator 376528 12610087 SPSE_0317 Staphylococcus pseudintermedius ED99 MarR family transcriptional regulator YP_006014500.1 376079 R 984892 CDS YP_006014501.1 386318338 12610088 376670..377299 1 NC_017568.1 identified by match to protein family HMM PF00881; nitroreductase family protein 377299 12610088 SPSE_0318 Staphylococcus pseudintermedius ED99 nitroreductase family protein YP_006014501.1 376670 D 984892 CDS YP_006014502.1 386318339 12610089 377634..378353 1 NC_017568.1 identified by match to protein family HMM PF04607; hypothetical protein 378353 12610089 SPSE_0319 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014502.1 377634 D 984892 CDS YP_006014503.1 386318340 12610090 complement(378663..379220) 1 NC_017568.1 identified by match to protein family HMM PF01551; M23 family peptidase 379220 12610090 SPSE_0320 Staphylococcus pseudintermedius ED99 M23 family peptidase YP_006014503.1 378663 R 984892 CDS YP_006014504.1 386318341 12610091 complement(379388..380095) 1 NC_017568.1 identified by match to protein family HMM PF06737; immunodominant staphylococcal antigen A 380095 isaA 12610091 isaA Staphylococcus pseudintermedius ED99 immunodominant staphylococcal antigen A YP_006014504.1 379388 R 984892 CDS YP_006014505.1 386318342 12610092 380520..381935 1 NC_017568.1 identified by match to protein family HMM PF03976; polyphosphate kinase 2 381935 12610092 SPSE_0322 Staphylococcus pseudintermedius ED99 polyphosphate kinase 2 YP_006014505.1 380520 D 984892 CDS YP_006014506.1 386318343 12610093 382039..382914 1 NC_017568.1 putative esterase 382914 12610093 SPSE_0323 Staphylococcus pseudintermedius ED99 putative esterase YP_006014506.1 382039 D 984892 CDS YP_006014507.1 386318344 12610094 complement(382996..383205) 1 NC_017568.1 hypothetical protein 383205 12610094 SPSE_0324 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014507.1 382996 R 984892 CDS YP_006014508.1 386318345 12610095 383392..384516 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 384516 12610095 SPSE_0325 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014508.1 383392 D 984892 CDS YP_006014509.1 386318346 12610096 complement(384723..386240) 1 NC_017568.1 identified by match to protein family HMM PF01447, match to protein family HMM PF02868, match to protein family HMM PF03413, match to protein family HMM PF07504; zinc metalloproteinase aureolysin 386240 12610096 SPSE_0326 Staphylococcus pseudintermedius ED99 zinc metalloproteinase aureolysin YP_006014509.1 384723 R 984892 CDS YP_006014510.1 386318347 12610097 386624..387505 1 NC_017568.1 identified by match to protein family HMM PF00106; short chain dehydrogenase/reductase family oxidoreductase 387505 12610097 SPSE_0327 Staphylococcus pseudintermedius ED99 short chain dehydrogenase/reductase family oxidoreductase YP_006014510.1 386624 D 984892 CDS YP_006014511.1 386318348 12610098 387732..388889 1 NC_017568.1 hypothetical protein 388889 12610098 SPSE_0328 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014511.1 387732 D 984892 CDS YP_006014512.1 386318349 12610099 388961..389356 1 NC_017568.1 hypothetical protein 389356 12610099 SPSE_0329 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014512.1 388961 D 984892 CDS YP_006014513.1 386318350 12610100 389445..389564 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 389564 12610100 SPSE_0330 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014513.1 389445 D 984892 CDS YP_006014514.1 386318351 12610101 complement(390110..391240) 1 NC_017568.1 hypothetical protein 391240 12610101 SPSE_0331 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014514.1 390110 R 984892 CDS YP_006014515.1 386318352 12610102 complement(392018..393007) 1 NC_017568.1 identified by match to protein family HMM PF03601; hypothetical protein 393007 12610102 SPSE_0332 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014515.1 392018 R 984892 CDS YP_006014516.1 386318353 12610103 393241..394887 1 NC_017568.1 identified by match to protein family HMM PF00205, match to protein family HMM PF02775, match to protein family HMM PF02776; indole-3-pyruvate decarboxylase 394887 12610103 SPSE_0333 Staphylococcus pseudintermedius ED99 indole-3-pyruvate decarboxylase YP_006014516.1 393241 D 984892 CDS YP_006014517.1 386318354 12610104 395978..397381 1 NC_017568.1 identified by match to protein family HMM PF00425, match to protein family HMM PF04715; anthranilate synthase component I 397381 trpE 12610104 trpE Staphylococcus pseudintermedius ED99 anthranilate synthase component I YP_006014517.1 395978 D 984892 CDS YP_006014518.1 386318355 12610105 397378..397962 1 NC_017568.1 identified by match to protein family HMM PF00117, match to protein family HMM TIGR00566; anthranilate synthase component II 397962 trpG 12610105 trpG Staphylococcus pseudintermedius ED99 anthranilate synthase component II YP_006014518.1 397378 D 984892 CDS YP_006014519.1 386318356 12610106 397946..398950 1 NC_017568.1 identified by match to protein family HMM PF00591, match to protein family HMM PF02885, match to protein family HMM TIGR01245; anthranilate phosphoribosyltransferase 398950 trpD 12610106 trpD Staphylococcus pseudintermedius ED99 anthranilate phosphoribosyltransferase YP_006014519.1 397946 D 984892 CDS YP_006014520.1 386318357 12610107 398947..399726 1 NC_017568.1 identified by match to protein family HMM PF00218; indole-3-glycerol phosphate synthase 399726 trpC 12610107 trpC Staphylococcus pseudintermedius ED99 indole-3-glycerol phosphate synthase YP_006014520.1 398947 D 984892 CDS YP_006014521.1 386318358 12610108 399728..400351 1 NC_017568.1 identified by match to protein family HMM PF00697; N-(5'phosphoribosyl)anthranilate isomerase 400351 trpF 12610108 trpF Staphylococcus pseudintermedius ED99 N-(5'phosphoribosyl)anthranilate isomerase YP_006014521.1 399728 D 984892 CDS YP_006014522.1 386318359 12610109 400354..401559 1 NC_017568.1 identified by match to protein family HMM PF00291, match to protein family HMM TIGR00263; tryptophan synthase subunit beta 401559 trpB 12610109 trpB Staphylococcus pseudintermedius ED99 tryptophan synthase subunit beta YP_006014522.1 400354 D 984892 CDS YP_006014523.1 386318360 12610110 401562..402311 1 NC_017568.1 identified by match to protein family HMM PF00290, match to protein family HMM TIGR00262; tryptophan synthase subunit alpha 402311 trpA 12610110 trpA Staphylococcus pseudintermedius ED99 tryptophan synthase subunit alpha YP_006014523.1 401562 D 984892 CDS YP_006014524.1 386318361 12610111 402431..403141 1 NC_017568.1 identified by match to protein family HMM PF00702, match to protein family HMM TIGR01549; HAD-superfamily hydrolase 403141 12610111 SPSE_0341 Staphylococcus pseudintermedius ED99 HAD-superfamily hydrolase YP_006014524.1 402431 D 984892 CDS YP_006014525.1 386318362 12610112 403599..404327 1 NC_017568.1 putative glutamyl-endopeptidase 404327 12610112 SPSE_0342 Staphylococcus pseudintermedius ED99 putative glutamyl-endopeptidase YP_006014525.1 403599 D 984892 CDS YP_006014526.1 386318363 12610113 complement(404618..405046) 1 NC_017568.1 6-pyruvoyl tetrahydrobiopterin synthase 405046 12610113 SPSE_0343 Staphylococcus pseudintermedius ED99 6-pyruvoyl tetrahydrobiopterin synthase YP_006014526.1 404618 R 984892 CDS YP_006014527.1 386318364 12610114 405267..406688 1 NC_017568.1 identified by match to protein family HMM PF01565, match to protein family HMM PF02913; glycolate oxidase, subunit GlcD 406688 12610114 SPSE_0344 Staphylococcus pseudintermedius ED99 glycolate oxidase, subunit GlcD YP_006014527.1 405267 D 984892 CDS YP_006014528.1 386318365 12610115 406678..407958 1 NC_017568.1 identified by match to protein family HMM PF00037, match to protein family HMM PF02754; glycolate oxidase iron-sulfur subunit 407958 12610115 SPSE_0345 Staphylococcus pseudintermedius ED99 glycolate oxidase iron-sulfur subunit YP_006014528.1 406678 D 984892 CDS YP_006014529.1 386318366 12610116 408114..409907 1 NC_017568.1 identified by match to protein family HMM PF00005, match to protein family HMM PF00664; ABC transporter ATP-binding protein 409907 12610116 SPSE_0346 Staphylococcus pseudintermedius ED99 ABC transporter ATP-binding protein YP_006014529.1 408114 D 984892 CDS YP_006014530.1 386318367 12610117 409888..411666 1 NC_017568.1 identified by match to protein family HMM PF00005, match to protein family HMM PF00664; ABC transporter ATP-binding protein 411666 12610117 SPSE_0347 Staphylococcus pseudintermedius ED99 ABC transporter ATP-binding protein YP_006014530.1 409888 D 984892 CDS YP_006014531.1 386318368 12610118 complement(412638..413378) 1 NC_017568.1 identified by match to protein family HMM PF00376, match to protein family HMM PF07739; transcriptional activator of multidrug-efflux transporters 413378 12610118 SPSE_0348 Staphylococcus pseudintermedius ED99 transcriptional activator of multidrug-efflux transporters YP_006014531.1 412638 R 984892 CDS YP_006014532.1 386318369 12610120 complement(413930..414358) 1 NC_017568.1 identified by match to protein family HMM PF01243; general stress protein 26 414358 12610120 SPSE_0351 Staphylococcus pseudintermedius ED99 general stress protein 26 YP_006014532.1 413930 R 984892 CDS YP_006014533.1 386318370 12610121 complement(414718..416112) 1 NC_017568.1 identified by match to protein family HMM PF01235, match to protein family HMM TIGR00835; amino acid transporter 416112 12610121 SPSE_0352 Staphylococcus pseudintermedius ED99 amino acid transporter YP_006014533.1 414718 R 984892 CDS YP_006014534.1 386318371 12610122 complement(417544..419499) 1 NC_017568.1 identified by match to protein family HMM PF06874; fructose-1,6-bisphosphatase 419499 fbp 12610122 fbp Staphylococcus pseudintermedius ED99 fructose-1,6-bisphosphatase YP_006014534.1 417544 R 984892 CDS YP_006014535.1 386318372 12610123 420015..421196 1 NC_017568.1 identified by match to protein family HMM PF07690; major facilitator superfamily protein 421196 12610123 SPSE_0354 Staphylococcus pseudintermedius ED99 major facilitator superfamily protein YP_006014535.1 420015 D 984892 CDS YP_006014536.1 386318373 12610124 421437..422702 1 NC_017568.1 identified by match to protein family HMM PF07690; major facilitator superfamily protein 422702 12610124 SPSE_0355 Staphylococcus pseudintermedius ED99 major facilitator superfamily protein YP_006014536.1 421437 D 984892 CDS YP_006014537.1 386318374 12610125 423088..423684 1 NC_017568.1 identified by match to protein family HMM PF04203, match to protein family HMM TIGR01076; sortase A 423684 srtA 12610125 srtA Staphylococcus pseudintermedius ED99 sortase A YP_006014537.1 423088 D 984892 CDS YP_006014538.1 386318375 12610126 423855..425000 1 NC_017568.1 identified by match to protein family HMM PF02595, match to protein family HMM TIGR00045; glycerate kinase 425000 12610126 SPSE_0357 Staphylococcus pseudintermedius ED99 glycerate kinase YP_006014538.1 423855 D 984892 CDS YP_006014539.1 386318376 12610127 425005..425538 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 425538 12610127 SPSE_0358 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014539.1 425005 D 984892 CDS YP_006014540.1 386318377 12610128 complement(425610..426284) 1 NC_017568.1 identified by match to protein family HMM PF01814, match to protein family HMM PF04405, match to protein family HMM TIGR03652; cell wall biosynthesis protein ScdA 426284 scdA 12610128 scdA Staphylococcus pseudintermedius ED99 cell wall biosynthesis protein ScdA YP_006014540.1 425610 R 984892 CDS YP_006014541.1 386318378 12610129 426812..427891 1 NC_017568.1 identified by match to protein family HMM PF00208, match to protein family HMM PF02812; leucine dehydrogenase 427891 dhlE 12610129 dhlE Staphylococcus pseudintermedius ED99 leucine dehydrogenase YP_006014541.1 426812 D 984892 CDS YP_006014542.1 386318379 12610130 428212..429282 1 NC_017568.1 regulatory protein 429282 12610130 SPSE_0361 Staphylococcus pseudintermedius ED99 regulatory protein YP_006014542.1 428212 D 984892 CDS YP_006014543.1 386318380 12610131 429579..431828 1 NC_017568.1 identified by match to protein family HMM PF01228, match to protein family HMM PF02901, match to protein family HMM TIGR01255; formate acetyltransferase 431828 pflB 12610131 pflB Staphylococcus pseudintermedius ED99 formate acetyltransferase YP_006014543.1 429579 D 984892 CDS YP_006014544.1 386318381 12610132 431887..432648 1 NC_017568.1 identified by match to protein family HMM PF04055, match to protein family HMM TIGR02493; pyruvate formate-lyase-activating enzyme 432648 pflA 12610132 pflA Staphylococcus pseudintermedius ED99 pyruvate formate-lyase-activating enzyme YP_006014544.1 431887 D 984892 CDS YP_006014545.1 386318382 12610133 432970..433086 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 433086 12610133 SPSE_0364 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014545.1 432970 D 984892 CDS YP_006014546.1 386318383 12610134 433251..433910 1 NC_017568.1 identified by match to protein family HMM PF01370; hypothetical protein 433910 12610134 SPSE_0365 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014546.1 433251 D 984892 CDS YP_006014547.1 386318384 12610135 434204..435928 1 NC_017568.1 identified by match to protein family HMM PF00496; oligopeptide ABC transporter oligopeptide-binding protein 435928 12610135 SPSE_0366 Staphylococcus pseudintermedius ED99 oligopeptide ABC transporter oligopeptide-binding protein YP_006014547.1 434204 D 984892 CDS YP_006014548.1 386318385 12610136 435939..437063 1 NC_017568.1 identified by match to protein family HMM PF00005, match to protein family HMM PF08352, match to protein family HMM TIGR01727; oligopeptide transport ATP-binding protein 437063 12610136 SPSE_0367 Staphylococcus pseudintermedius ED99 oligopeptide transport ATP-binding protein YP_006014548.1 435939 D 984892 CDS YP_006014549.1 386318386 12610137 437060..438049 1 NC_017568.1 identified by match to protein family HMM PF00005, match to protein family HMM PF08352, match to protein family HMM TIGR01727; oligopeptide transport ATP-binding protein 438049 12610137 SPSE_0368 Staphylococcus pseudintermedius ED99 oligopeptide transport ATP-binding protein YP_006014549.1 437060 D 984892 CDS YP_006014550.1 386318387 12610138 438046..439008 1 NC_017568.1 identified by match to protein family HMM PF00528; oligopeptide transport system permease 439008 12610138 SPSE_0369 Staphylococcus pseudintermedius ED99 oligopeptide transport system permease YP_006014550.1 438046 D 984892 CDS YP_006014551.1 386318388 12610139 439020..439913 1 NC_017568.1 identified by match to protein family HMM PF00528; oligopeptide transport system permease 439913 12610139 SPSE_0370 Staphylococcus pseudintermedius ED99 oligopeptide transport system permease YP_006014551.1 439020 D 984892 CDS YP_006014552.1 386318389 12610140 440145..441866 1 NC_017568.1 identified by match to protein family HMM PF00496; oligopeptide ABC transporter oligopeptide-binding protein 441866 12610140 SPSE_0371 Staphylococcus pseudintermedius ED99 oligopeptide ABC transporter oligopeptide-binding protein YP_006014552.1 440145 D 984892 CDS YP_006014553.1 386318390 12610141 441972..442982 1 NC_017568.1 identified by match to protein family HMM PF00005, match to protein family HMM PF08352, match to protein family HMM TIGR01727; oligopeptide transport ATP-binding protein 442982 12610141 SPSE_0372 Staphylococcus pseudintermedius ED99 oligopeptide transport ATP-binding protein YP_006014553.1 441972 D 984892 CDS YP_006014554.1 386318391 12610142 442975..443961 1 NC_017568.1 identified by match to protein family HMM PF00005, match to protein family HMM PF08352, match to protein family HMM TIGR01727; oligopeptide transport ATP-binding protein 443961 12610142 SPSE_0373 Staphylococcus pseudintermedius ED99 oligopeptide transport ATP-binding protein YP_006014554.1 442975 D 984892 CDS YP_006014555.1 386318392 12610143 443958..444920 1 NC_017568.1 identified by match to protein family HMM PF00528; oligopeptide transport system permease 444920 12610143 SPSE_0374 Staphylococcus pseudintermedius ED99 oligopeptide transport system permease YP_006014555.1 443958 D 984892 CDS YP_006014556.1 386318393 12610144 444932..445825 1 NC_017568.1 identified by match to protein family HMM PF00528; oligopeptide transport system permease 445825 12610144 SPSE_0375 Staphylococcus pseudintermedius ED99 oligopeptide transport system permease YP_006014556.1 444932 D 984892 CDS YP_006014557.1 386318394 12610145 446143..446400 1 NC_017568.1 hypothetical protein 446400 12610145 SPSE_0376 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014557.1 446143 D 984892 CDS YP_006014558.1 386318395 12610146 complement(446786..447685) 1 NC_017568.1 identified by match to protein family HMM PF03313, match to protein family HMM TIGR00718; L-serine dehydratase, iron-sulfur-dependent, alpha subunit 1 447685 sdaAA1 12610146 sdaAA1 Staphylococcus pseudintermedius ED99 L-serine dehydratase, iron-sulfur-dependent, alpha subunit 1 YP_006014558.1 446786 R 984892 CDS YP_006014559.1 386318396 12610147 complement(447701..448378) 1 NC_017568.1 identified by match to protein family HMM PF03315, match to protein family HMM TIGR00719; L-serine dehydratase, iron-sulfur-dependent, beta subunit 1 448378 sdaAB1 12610147 sdaAB1 Staphylococcus pseudintermedius ED99 L-serine dehydratase, iron-sulfur-dependent, beta subunit 1 YP_006014559.1 447701 R 984892 CDS YP_006014560.1 386318397 12610148 complement(448393..449424) 1 NC_017568.1 perfringolysin O regulator protein 449424 12610148 SPSE_0379 Staphylococcus pseudintermedius ED99 perfringolysin O regulator protein YP_006014560.1 448393 R 984892 CDS YP_006014561.1 386318398 12610149 449692..449814 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 449814 12610149 SPSE_0380 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014561.1 449692 D 984892 CDS YP_006014562.1 386318399 12610150 449984..450163 1 NC_017568.1 hypothetical protein 450163 12610150 SPSE_0381 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014562.1 449984 D 984892 CDS YP_006014563.1 386318400 12610151 450462..451283 1 NC_017568.1 identified by match to protein family HMM PF00149; putative phosphoesterase 451283 12610151 SPSE_0382 Staphylococcus pseudintermedius ED99 putative phosphoesterase YP_006014563.1 450462 D 984892 CDS YP_006014564.1 386318401 12610152 452063..453553 1 NC_017568.1 identified by match to protein family HMM PF00171; aldehyde dehydrogenase 453553 aldA1 12610152 aldA1 Staphylococcus pseudintermedius ED99 aldehyde dehydrogenase YP_006014564.1 452063 D 984892 CDS YP_006014565.1 386318402 12610153 complement(454150..454410) 1 NC_017568.1 replication initiation protein, truncated 454410 12610153 SPSE_0384 Staphylococcus pseudintermedius ED99 replication initiation protein, truncated YP_006014565.1 454150 R 984892 CDS YP_006014566.1 386318403 12610155 complement(455738..456526) 1 NC_017568.1 hypothetical protein 456526 12610155 SPSE_0386 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014566.1 455738 R 984892 CDS YP_006014567.1 386318404 12610156 complement(456635..456916) 1 NC_017568.1 hypothetical protein 456916 12610156 SPSE_0387 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014567.1 456635 R 984892 CDS YP_006014568.1 386318405 12610157 complement(457063..457770) 1 NC_017568.1 identified by match to protein family HMM PF02486; replication initiation protein, truncated 457770 12610157 SPSE_0388 Staphylococcus pseudintermedius ED99 replication initiation protein, truncated YP_006014568.1 457063 R 984892 CDS YP_006014569.1 386318406 12610158 457824..458849 1 NC_017568.1 identified by match to protein family HMM PF02378; PTS system transporter subunit IIC 458849 12610158 SPSE_0389 Staphylococcus pseudintermedius ED99 PTS system transporter subunit IIC YP_006014569.1 457824 D 984892 CDS YP_006014570.1 386318407 12610159 458947..460479 1 NC_017568.1 identified by match to protein family HMM PF00939, match to protein family HMM PF03600, match to protein family HMM TIGR00785; anion transporter family protein 460479 12610159 SPSE_0390 Staphylococcus pseudintermedius ED99 anion transporter family protein YP_006014570.1 458947 D 984892 CDS YP_006014571.1 386318408 12610160 460695..461519 1 NC_017568.1 identified by match to protein family HMM PF01226; formate/nitrite transporter family protein 461519 12610160 SPSE_0391 Staphylococcus pseudintermedius ED99 formate/nitrite transporter family protein YP_006014571.1 460695 D 984892 CDS YP_006014572.1 386318409 12610161 461744..462301 1 NC_017568.1 identified by match to protein family HMM PF00583; GNAT family acetyltransferase 462301 12610161 SPSE_0392 Staphylococcus pseudintermedius ED99 GNAT family acetyltransferase YP_006014572.1 461744 D 984892 CDS YP_006014573.1 386318410 12610162 462470..463213 1 NC_017568.1 identified by match to protein family HMM PF01903; transcriptional regulator NirR 463213 nirR 12610162 nirR Staphylococcus pseudintermedius ED99 transcriptional regulator NirR YP_006014573.1 462470 D 984892 CDS YP_006014574.1 386318411 12610163 463195..463656 1 NC_017568.1 siroheme synthase 463656 12610163 SPSE_0394 Staphylococcus pseudintermedius ED99 siroheme synthase YP_006014574.1 463195 D 984892 CDS YP_006014575.1 386318412 12610164 463649..466054 1 NC_017568.1 identified by match to protein family HMM PF00070, match to protein family HMM PF01077, match to protein family HMM PF03460, match to protein family HMM PF04324, match to protein family HMM PF07992, match to protein family HMM TIGR02374; nitrite reductase [NAD(P)H], large subunit 466054 nirB 12610164 nirB Staphylococcus pseudintermedius ED99 nitrite reductase [NAD(P)H], large subunit YP_006014575.1 463649 D 984892 CDS YP_006014576.1 386318413 12610165 466059..466373 1 NC_017568.1 identified by match to protein family HMM PF00355, match to protein family HMM TIGR02378; nitrite reductase [NAD(P)H], small subunit 466373 nirD 12610165 nirD Staphylococcus pseudintermedius ED99 nitrite reductase [NAD(P)H], small subunit YP_006014576.1 466059 D 984892 CDS YP_006014577.1 386318414 12610166 466361..467308 1 NC_017568.1 identified by match to protein family HMM PF00590, match to protein family HMM TIGR01469; uroporphyrinogen-III C-methyltransferase 467308 cobA 12610166 cobA Staphylococcus pseudintermedius ED99 uroporphyrinogen-III C-methyltransferase YP_006014577.1 466361 D 984892 CDS YP_006014578.1 386318415 12610167 468250..469260 1 NC_017568.1 identified by match to protein family HMM PF00149; 5'-nucleotidase family protein, point mutation 469260 12610167 SPSE_0398 Staphylococcus pseudintermedius ED99 5'-nucleotidase family protein, point mutation YP_006014578.1 468250 D 984892 CDS YP_006014579.1 386318416 12610168 469321..470592 1 NC_017568.1 identified by match to protein family HMM PF00746, match to protein family HMM PF02872, match to protein family HMM TIGR01167; 5'-nucleotidase family protein, point mutation 470592 12610168 SPSE_0399 Staphylococcus pseudintermedius ED99 5'-nucleotidase family protein, point mutation YP_006014579.1 469321 D 984892 CDS YP_006014580.1 386318417 12610170 complement(471966..473411) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 473411 12610170 SPSE_0402 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014580.1 471966 R 984892 CDS YP_006014581.1 386318418 12610171 complement(473416..474285) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 474285 12610171 SPSE_0403 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014581.1 473416 R 984892 CDS YP_006014582.1 386318419 12610172 complement(474291..475358) 1 NC_017568.1 identified by match to protein family HMM TIGR03605; hypothetical protein 475358 12610172 SPSE_0404 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014582.1 474291 R 984892 CDS YP_006014583.1 386318420 12610173 complement(475376..476431) 1 NC_017568.1 identified by match to protein family HMM TIGR03605; hypothetical protein 476431 12610173 SPSE_0405 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014583.1 475376 R 984892 CDS YP_006014584.1 386318421 12610174 476733..478397 1 NC_017568.1 identified by match to protein family HMM PF00750, match to protein family HMM PF03485, match to protein family HMM PF05746, match to protein family HMM TIGR00456; arginyl-tRNA synthetase 2 478397 argS2 12610174 argS2 Staphylococcus pseudintermedius ED99 arginyl-tRNA synthetase 2 YP_006014584.1 476733 D 984892 CDS YP_006014585.1 386318422 12610176 480252..483923 1 NC_017568.1 identified by match to protein family HMM PF00384, match to protein family HMM PF01568, match to protein family HMM TIGR01580; nitrate reductase subunit alpha 483923 narG 12610176 narG Staphylococcus pseudintermedius ED99 nitrate reductase subunit alpha YP_006014585.1 480252 D 984892 CDS YP_006014586.1 386318423 12610177 483913..485469 1 NC_017568.1 identified by match to protein family HMM TIGR01660; nitrate reductase subunit beta 485469 narH 12610177 narH Staphylococcus pseudintermedius ED99 nitrate reductase subunit beta YP_006014586.1 483913 D 984892 CDS YP_006014587.1 386318424 12610178 485462..486037 1 NC_017568.1 identified by match to protein family HMM PF02613, match to protein family HMM TIGR00684; nitrate reductase subunit delta 486037 narJ 12610178 narJ Staphylococcus pseudintermedius ED99 nitrate reductase subunit delta YP_006014587.1 485462 D 984892 CDS YP_006014588.1 386318425 12610179 486030..486707 1 NC_017568.1 identified by match to protein family HMM PF02665, match to protein family HMM TIGR00351; nitrate reductase subunit gamma 486707 narI 12610179 narI Staphylococcus pseudintermedius ED99 nitrate reductase subunit gamma YP_006014588.1 486030 D 984892 CDS YP_006014589.1 386318426 12610180 486723..487184 1 NC_017568.1 nitrogen regulation-related NreA protein 487184 nreA 12610180 nreA Staphylococcus pseudintermedius ED99 nitrogen regulation-related NreA protein YP_006014589.1 486723 D 984892 CDS YP_006014590.1 386318427 12610181 487184..488218 1 NC_017568.1 identified by match to protein family HMM PF02518, match to protein family HMM PF07730; two-component sensor histidine kinase NreB 488218 nreB 12610181 nreB Staphylococcus pseudintermedius ED99 two-component sensor histidine kinase NreB YP_006014590.1 487184 D 984892 CDS YP_006014591.1 386318428 12610182 488237..488887 1 NC_017568.1 identified by match to protein family HMM PF00072, match to protein family HMM PF00196; two-component response regulator NreC 488887 nreC 12610182 nreC Staphylococcus pseudintermedius ED99 two-component response regulator NreC YP_006014591.1 488237 D 984892 CDS YP_006014592.1 386318429 12610183 complement(489165..489290) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 489290 12610183 SPSE_0416 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014592.1 489165 R 984892 CDS YP_006014593.1 386318430 12610184 complement(489513..489662) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 489662 12610184 SPSE_0417 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014593.1 489513 R 984892 CDS YP_006014594.1 386318431 12610185 490031..490207 1 NC_017568.1 hypothetical protein 490207 12610185 SPSE_0418 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014594.1 490031 D 984892 CDS YP_006014595.1 386318432 12610186 490274..490390 1 NC_017568.1 hypothetical protein 490390 12610186 SPSE_0419 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014595.1 490274 D 984892 CDS YP_006014596.1 386318433 12610187 490640..491818 1 NC_017568.1 identified by match to protein family HMM PF07690; nitrite extrusion protein 491818 12610187 SPSE_0420 Staphylococcus pseudintermedius ED99 nitrite extrusion protein YP_006014596.1 490640 D 984892 CDS YP_006014597.1 386318434 12610188 complement(491932..493530) 1 NC_017568.1 identified by match to protein family HMM PF01546; peptidase family M20/M25/M40 protein 493530 12610188 SPSE_0421 Staphylococcus pseudintermedius ED99 peptidase family M20/M25/M40 protein YP_006014597.1 491932 R 984892 CDS YP_006014598.1 386318435 12610189 493714..494070 1 NC_017568.1 hypothetical protein 494070 12610189 SPSE_0422 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014598.1 493714 D 984892 CDS YP_006014599.1 386318436 12610190 complement(494238..495185) 1 NC_017568.1 identified by match to protein family HMM PF00056, match to protein family HMM PF02866; L-lactate dehydrogenase 495185 12610190 SPSE_0423 Staphylococcus pseudintermedius ED99 L-lactate dehydrogenase YP_006014599.1 494238 R 984892 CDS YP_006014600.1 386318437 12610191 495366..496439 1 NC_017568.1 identified by match to protein family HMM PF05343; glutamyl aminopeptidase, M42 family 496439 12610191 SPSE_0424 Staphylococcus pseudintermedius ED99 glutamyl aminopeptidase, M42 family YP_006014600.1 495366 D 984892 CDS YP_006014601.1 386318438 12610192 496611..497516 1 NC_017568.1 identified by match to protein family HMM PF00892; transporter, drug/metabolite exporter family 497516 12610192 SPSE_0425 Staphylococcus pseudintermedius ED99 transporter, drug/metabolite exporter family YP_006014601.1 496611 D 984892 CDS YP_006014602.1 386318439 12610193 complement(497871..498206) 1 NC_017568.1 hypothetical protein 498206 12610193 SPSE_0426 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014602.1 497871 R 984892 CDS YP_006014603.1 386318440 12610194 498490..499683 1 NC_017568.1 identified by match to protein family HMM PF07690; transporter, major facilitator family protein 499683 12610194 SPSE_0427 Staphylococcus pseudintermedius ED99 transporter, major facilitator family protein YP_006014603.1 498490 D 984892 CDS YP_006014604.1 386318441 12610195 complement(499769..501862) 1 NC_017568.1 identified by match to protein family HMM PF00165; AraC family transcriptional regulator 501862 12610195 SPSE_0428 Staphylococcus pseudintermedius ED99 AraC family transcriptional regulator YP_006014604.1 499769 R 984892 CDS YP_006014605.1 386318442 12610196 502437..503876 1 NC_017568.1 identified by match to protein family HMM PF00367, match to protein family HMM PF02378, match to protein family HMM TIGR00826, match to protein family HMM TIGR01996; PTS system sucrose-specific IIBC component 503876 12610196 SPSE_0429 Staphylococcus pseudintermedius ED99 PTS system sucrose-specific IIBC component YP_006014605.1 502437 D 984892 CDS YP_006014606.1 386318443 12610197 complement(504573..505511) 1 NC_017568.1 identified by match to protein family HMM PF01544; transporter, CorA family 505511 12610197 SPSE_0430 Staphylococcus pseudintermedius ED99 transporter, CorA family YP_006014606.1 504573 R 984892 CDS YP_006014607.1 386318444 12610198 complement(505508..505972) 1 NC_017568.1 identified by match to protein family HMM PF01047; MarR family transcriptional regulator 505972 12610198 SPSE_0431 Staphylococcus pseudintermedius ED99 MarR family transcriptional regulator YP_006014607.1 505508 R 984892 CDS YP_006014608.1 386318445 12610199 506377..508038 1 NC_017568.1 identified by match to protein family HMM PF02690, match to protein family HMM TIGR00704; Na/Pi cotransporter family protein 508038 12610199 SPSE_0432 Staphylococcus pseudintermedius ED99 Na/Pi cotransporter family protein YP_006014608.1 506377 D 984892 CDS YP_006014609.1 386318446 12610200 508341..508544 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 508544 12610200 SPSE_0433 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014609.1 508341 D 984892 CDS YP_006014610.1 386318447 12610201 508752..509210 1 NC_017568.1 hypothetical protein 509210 12610201 SPSE_0434 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014610.1 508752 D 984892 CDS YP_006014611.1 386318448 12610202 complement(509320..510639) 1 NC_017568.1 identified by match to protein family HMM PF01610; transposase for ISSps1 510639 12610202 SPSE_0435 Staphylococcus pseudintermedius ED99 transposase for ISSps1 YP_006014611.1 509320 R 984892 CDS YP_006014612.1 386318449 12610203 complement(510779..511195) 1 NC_017568.1 identified by match to protein family HMM PF00583; GNAT family acetyltransferase 511195 12610203 SPSE_0436 Staphylococcus pseudintermedius ED99 GNAT family acetyltransferase YP_006014612.1 510779 R 984892 CDS YP_006014613.1 386318450 12610204 complement(511216..512244) 1 NC_017568.1 identified by match to protein family HMM PF00070, match to protein family HMM PF03486, match to protein family HMM PF07992; pyridine nucleotide-disulfide oxidoreductase family protein 512244 12610204 SPSE_0437 Staphylococcus pseudintermedius ED99 pyridine nucleotide-disulfide oxidoreductase family protein YP_006014613.1 511216 R 984892 CDS YP_006014614.1 386318451 12610205 complement(512431..513774) 1 NC_017568.1 identified by match to protein family HMM PF00083, match to protein family HMM PF07690, match to protein family HMM TIGR00879; major facilitator superfamily transporter, sugar porter family 513774 12610205 SPSE_0438 Staphylococcus pseudintermedius ED99 major facilitator superfamily transporter, sugar porter family YP_006014614.1 512431 R 984892 CDS YP_006014615.1 386318452 12610206 complement(514011..515006) 1 NC_017568.1 identified by match to protein family HMM PF00107, match to protein family HMM PF08240, match to protein family HMM TIGR02823; zinc-binding alcohol dehydrogenase 515006 12610206 SPSE_0439 Staphylococcus pseudintermedius ED99 zinc-binding alcohol dehydrogenase YP_006014615.1 514011 R 984892 CDS YP_006014616.1 386318453 12610207 515138..515656 1 NC_017568.1 identified by match to protein family HMM PF00583; GNAT family acetyltransferase 515656 12610207 SPSE_0440 Staphylococcus pseudintermedius ED99 GNAT family acetyltransferase YP_006014616.1 515138 D 984892 CDS YP_006014617.1 386318454 12610208 515761..516465 1 NC_017568.1 putative lipoprotein 516465 12610208 SPSE_0441 Staphylococcus pseudintermedius ED99 putative lipoprotein YP_006014617.1 515761 D 984892 CDS YP_006014618.1 386318455 12610209 516919..518523 1 NC_017568.1 identified by match to protein family HMM PF02652, match to protein family HMM TIGR00795; L-lactate permease 518523 lctP 12610209 lctP Staphylococcus pseudintermedius ED99 L-lactate permease YP_006014618.1 516919 D 984892 CDS YP_006014619.1 386318456 12610210 519188..520396 1 NC_017568.1 identified by match to protein family HMM PF02371; transposase for ISSps2 520396 12610210 SPSE_0443 Staphylococcus pseudintermedius ED99 transposase for ISSps2 YP_006014619.1 519188 D 984892 CDS YP_006014620.1 386318457 12610211 complement(520555..521730) 1 NC_017568.1 identified by match to protein family HMM PF00534; glycoside hydrolase family protein 521730 12610211 SPSE_0444 Staphylococcus pseudintermedius ED99 glycoside hydrolase family protein YP_006014620.1 520555 R 984892 CDS YP_006014621.1 386318458 12610212 522157..523662 1 NC_017568.1 identified by match to protein family HMM PF01266, match to protein family HMM PF06039, match to protein family HMM TIGR01320; malate:quinone-oxidoreductase 1 523662 mqo1 12610212 mqo1 Staphylococcus pseudintermedius ED99 malate:quinone-oxidoreductase 1 YP_006014621.1 522157 D 984892 CDS YP_006014622.1 386318459 12610213 complement(524014..525405) 1 NC_017568.1 identified by match to protein family HMM PF00512, match to protein family HMM PF00672, match to protein family HMM PF02518; signal transduction histidine kinase HssS 525405 hssS 12610213 hssS Staphylococcus pseudintermedius ED99 signal transduction histidine kinase HssS YP_006014622.1 524014 R 984892 CDS YP_006014623.1 386318460 12610214 complement(525398..526075) 1 NC_017568.1 identified by match to protein family HMM PF00072, match to protein family HMM PF00486; heme response regulator HssR 526075 hssR 12610214 hssR Staphylococcus pseudintermedius ED99 heme response regulator HssR YP_006014623.1 525398 R 984892 CDS YP_006014624.1 386318461 12610215 526924..527988 1 NC_017568.1 identified by match to protein family HMM PF02687; ABC transporter permease 527988 12610215 SPSE_0448 Staphylococcus pseudintermedius ED99 ABC transporter permease YP_006014624.1 526924 D 984892 CDS YP_006014625.1 386318462 12610216 527985..528674 1 NC_017568.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 528674 12610216 SPSE_0449 Staphylococcus pseudintermedius ED99 ABC transporter ATP-binding protein YP_006014625.1 527985 D 984892 CDS YP_006014626.1 386318463 12610217 complement(528717..528923) 1 NC_017568.1 hypothetical protein 528923 12610217 SPSE_0450 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014626.1 528717 R 984892 CDS YP_006014627.1 386318464 12610218 complement(529111..530064) 1 NC_017568.1 identified by match to protein family HMM PF02698; membrane protein 530064 12610218 SPSE_0451 Staphylococcus pseudintermedius ED99 membrane protein YP_006014627.1 529111 R 984892 CDS YP_006014628.1 386318465 12610219 530205..530669 1 NC_017568.1 identified by match to protein family HMM PF01047; HTH-type transcriptional regulator TcaR 530669 tcaR 12610219 tcaR Staphylococcus pseudintermedius ED99 HTH-type transcriptional regulator TcaR YP_006014628.1 530205 D 984892 CDS YP_006014629.1 386318466 12610220 530776..532170 1 NC_017568.1 teicoplanin resistance associated membrane protein TcaA 532170 tcaA 12610220 tcaA Staphylococcus pseudintermedius ED99 teicoplanin resistance associated membrane protein TcaA YP_006014629.1 530776 D 984892 CDS YP_006014630.1 386318467 12610221 532648..533190 1 NC_017568.1 transcriptional regulator 533190 12610221 SPSE_0454 Staphylococcus pseudintermedius ED99 transcriptional regulator YP_006014630.1 532648 D 984892 CDS YP_006014631.1 386318468 12610222 533284..533958 1 NC_017568.1 identified by match to protein family HMM PF03070; transcriptional activator, TenA/Thi-4 family 533958 12610222 SPSE_0455 Staphylococcus pseudintermedius ED99 transcriptional activator, TenA/Thi-4 family YP_006014631.1 533284 D 984892 CDS YP_006014632.1 386318469 12610223 complement(534084..534716) 1 NC_017568.1 hypothetical protein 534716 12610223 SPSE_0456 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014632.1 534084 R 984892 CDS YP_006014633.1 386318470 12610224 534877..535212 1 NC_017568.1 identified by match to protein family HMM PF00085; thioredoxin 535212 12610224 SPSE_0457 Staphylococcus pseudintermedius ED99 thioredoxin YP_006014633.1 534877 D 984892 CDS YP_006014634.1 386318471 12610225 535335..536237 1 NC_017568.1 identified by match to protein family HMM PF07859; hypothetical protein 536237 12610225 SPSE_0458 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014634.1 535335 D 984892 CDS YP_006014635.1 386318472 12610226 536814..537845 1 NC_017568.1 perfringolysin O regulator protein 537845 pfoR 12610226 pfoR Staphylococcus pseudintermedius ED99 perfringolysin O regulator protein YP_006014635.1 536814 D 984892 CDS YP_006014636.1 386318473 12610227 complement(537904..538380) 1 NC_017568.1 hypothetical protein 538380 12610227 SPSE_0460 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014636.1 537904 R 984892 CDS YP_006014637.1 386318474 12610228 538556..539587 1 NC_017568.1 identified by match to protein family HMM PF01070, match to protein family HMM PF01791, match to protein family HMM TIGR02151; isopentenyl-diphosphate delta-isomerase 539587 fni 12610228 fni Staphylococcus pseudintermedius ED99 isopentenyl-diphosphate delta-isomerase YP_006014637.1 538556 D 984892 CDS YP_006014638.1 386318475 12610229 539761..540966 1 NC_017568.1 identified by match to protein family HMM PF02492, match to protein family HMM PF07683; putative cobalamin synthesis protein 540966 12610229 SPSE_0462 Staphylococcus pseudintermedius ED99 putative cobalamin synthesis protein YP_006014638.1 539761 D 984892 CDS YP_006014639.1 386318476 12610230 complement(541127..541288) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 541288 12610230 SPSE_0463 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014639.1 541127 R 984892 CDS YP_006014640.1 386318477 12610231 complement(541301..541453) 1 NC_017568.1 identified by match to protein family HMM TIGR01847; bacteriocin-type signal sequence domain protein 541453 12610231 SPSE_0464 Staphylococcus pseudintermedius ED99 bacteriocin-type signal sequence domain protein YP_006014640.1 541301 R 984892 CDS YP_006014641.1 386318478 12610232 541589..543733 1 NC_017568.1 identified by match to protein family HMM PF00005, match to protein family HMM PF00664, match to protein family HMM PF03412, match to protein family HMM TIGR01193; ABC-type bacteriocin transporter family protein 543733 12610232 SPSE_0465 Staphylococcus pseudintermedius ED99 ABC-type bacteriocin transporter family protein YP_006014641.1 541589 D 984892 CDS YP_006014642.1 386318479 12610233 544229..544645 1 NC_017568.1 transposase, IS256 family, truncated 544645 12610233 SPSE_0466 Staphylococcus pseudintermedius ED99 transposase, IS256 family, truncated YP_006014642.1 544229 D 984892 CDS YP_006014643.1 386318480 12610234 544764..544979 1 NC_017568.1 transposase, truncated 544979 12610234 SPSE_0467 Staphylococcus pseudintermedius ED99 transposase, truncated YP_006014643.1 544764 D 984892 CDS YP_006014644.1 386318481 12610235 complement(545133..546344) 1 NC_017568.1 identified by match to protein family HMM PF03616, match to protein family HMM TIGR00210; sodium/glutamate symporter 546344 gltS 12610235 gltS Staphylococcus pseudintermedius ED99 sodium/glutamate symporter YP_006014644.1 545133 R 984892 CDS YP_006014645.1 386318482 12610236 complement(546515..547375) 1 NC_017568.1 identified by match to protein family HMM PF00165, match to protein family HMM PF02311; AraC family transcriptional regulator 547375 12610236 SPSE_0469 Staphylococcus pseudintermedius ED99 AraC family transcriptional regulator YP_006014645.1 546515 R 984892 CDS YP_006014646.1 386318483 12610237 547510..548295 1 NC_017568.1 identified by match to protein family HMM PF02837; glycosyl hydrolase family 2, sugar binding domain 548295 12610237 SPSE_0470 Staphylococcus pseudintermedius ED99 glycosyl hydrolase family 2, sugar binding domain YP_006014646.1 547510 D 984892 CDS YP_006014647.1 386318484 12610238 548487..548807 1 NC_017568.1 identified by match to protein family HMM PF03551; PadR family transcriptional regulator 548807 12610238 SPSE_0471 Staphylococcus pseudintermedius ED99 PadR family transcriptional regulator YP_006014647.1 548487 D 984892 CDS YP_006014648.1 386318485 12610239 548798..549361 1 NC_017568.1 identified by match to protein family HMM PF08006; hypothetical protein 549361 12610239 SPSE_0472 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014648.1 548798 D 984892 CDS YP_006014649.1 386318486 12610240 549358..550173 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 550173 12610240 SPSE_0473 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014649.1 549358 D 984892 CDS YP_006014650.1 386318487 12610241 550345..551679 1 NC_017568.1 identified by match to protein family HMM PF03553; Na+/H+ antiporter 551679 12610241 SPSE_0474 Staphylococcus pseudintermedius ED99 Na+/H+ antiporter YP_006014650.1 550345 D 984892 CDS YP_006014651.1 386318488 12610242 complement(551760..552368) 1 NC_017568.1 identified by match to protein family HMM PF02245, match to protein family HMM TIGR00567; 3-methyladenine DNA glycosylase 552368 12610242 SPSE_0475 Staphylococcus pseudintermedius ED99 3-methyladenine DNA glycosylase YP_006014651.1 551760 R 984892 CDS YP_006014652.1 386318489 12610243 552548..553234 1 NC_017568.1 identified by match to protein family HMM PF05656; hypothetical protein 553234 12610243 SPSE_0476 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014652.1 552548 D 984892 CDS YP_006014653.1 386318490 12610244 553493..554383 1 NC_017568.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 554383 12610244 SPSE_0477 Staphylococcus pseudintermedius ED99 ABC transporter ATP-binding protein YP_006014653.1 553493 D 984892 CDS YP_006014654.1 386318491 12610245 554385..555629 1 NC_017568.1 ABC-type Na+ efflux pump permease component 555629 12610245 SPSE_0478 Staphylococcus pseudintermedius ED99 ABC-type Na+ efflux pump permease component YP_006014654.1 554385 D 984892 CDS YP_006014655.1 386318492 12610246 555782..556114 1 NC_017568.1 identified by match to protein family HMM PF02694; hypothetical protein 556114 12610246 SPSE_0479 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014655.1 555782 D 984892 CDS YP_006014656.1 386318493 12610247 556149..557174 1 NC_017568.1 identified by match to protein family HMM PF01263; aldose 1-epimerase 557174 12610247 SPSE_0480 Staphylococcus pseudintermedius ED99 aldose 1-epimerase YP_006014656.1 556149 D 984892 CDS YP_006014657.1 386318494 12610248 complement(557246..557905) 1 NC_017568.1 identified by match to protein family HMM PF03473, match to protein family HMM PF03475; hypothetical protein 557905 12610248 SPSE_0481 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014657.1 557246 R 984892 CDS YP_006014658.1 386318495 12610249 558031..558726 1 NC_017568.1 identified by match to protein family HMM PF06026, match to protein family HMM TIGR00021; ribose 5-phosphate isomerase A 558726 rpiA 12610249 rpiA Staphylococcus pseudintermedius ED99 ribose 5-phosphate isomerase A YP_006014658.1 558031 D 984892 CDS YP_006014659.1 386318496 12610250 complement(558836..559765) 1 NC_017568.1 identified by match to protein family HMM PF00491, match to protein family HMM TIGR01227; formimidoylglutamase 559765 hutG 12610250 hutG Staphylococcus pseudintermedius ED99 formimidoylglutamase YP_006014659.1 558836 R 984892 CDS YP_006014660.1 386318497 12610251 560171..561055 1 NC_017568.1 identified by match to protein family HMM PF02517; lysostaphin resistance protein A, truncated 561055 12610251 SPSE_0484 Staphylococcus pseudintermedius ED99 lysostaphin resistance protein A, truncated YP_006014660.1 560171 D 984892 CDS YP_006014661.1 386318498 12610252 complement(561244..562125) 1 NC_017568.1 identified by match to protein family HMM PF00126, match to protein family HMM PF03466; LysR family transcriptional regulator 562125 12610252 SPSE_0485 Staphylococcus pseudintermedius ED99 LysR family transcriptional regulator YP_006014661.1 561244 R 984892 CDS YP_006014662.1 386318499 12610253 562325..563629 1 NC_017568.1 identified by match to protein family HMM PF07670; membrane protein 563629 12610253 SPSE_0486 Staphylococcus pseudintermedius ED99 membrane protein YP_006014662.1 562325 D 984892 CDS YP_006014663.1 386318500 12610254 563648..565315 1 NC_017568.1 identified by match to protein family HMM PF01175, match to protein family HMM TIGR01228; urocanate hydratase 565315 hutU 12610254 hutU Staphylococcus pseudintermedius ED99 urocanate hydratase YP_006014663.1 563648 D 984892 CDS YP_006014664.1 386318501 12610255 565312..566553 1 NC_017568.1 identified by match to protein family HMM PF01979, match to protein family HMM PF07969, match to protein family HMM TIGR01224; imidazolonepropionase 566553 hutI 12610255 hutI Staphylococcus pseudintermedius ED99 imidazolonepropionase YP_006014664.1 565312 D 984892 CDS YP_006014665.1 386318502 12610256 567082..568278 1 NC_017568.1 identified by match to protein family HMM PF00860, match to protein family HMM PF00916; sulfate permease family protein 568278 12610256 SPSE_0489 Staphylococcus pseudintermedius ED99 sulfate permease family protein YP_006014665.1 567082 D 984892 CDS YP_006014666.1 386318503 12610257 568268..569404 1 NC_017568.1 identified by match to protein family HMM PF01546, match to protein family HMM PF07687, match to protein family HMM TIGR01891; amidohydrolase family protein 569404 12610257 SPSE_0490 Staphylococcus pseudintermedius ED99 amidohydrolase family protein YP_006014666.1 568268 D 984892 CDS YP_006014667.1 386318504 12610258 569567..570868 1 NC_017568.1 identified by match to protein family HMM PF03553; Na+/H+ antiporter 570868 12610258 SPSE_0491 Staphylococcus pseudintermedius ED99 Na+/H+ antiporter YP_006014667.1 569567 D 984892 CDS YP_006014668.1 386318505 12610259 570979..571482 1 NC_017568.1 identified by match to protein family HMM PF08327; hypothetical protein 571482 12610259 SPSE_0492 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014668.1 570979 D 984892 CDS YP_006014669.1 386318506 12610260 complement(571598..572125) 1 NC_017568.1 hypothetical protein 572125 12610260 SPSE_0493 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014669.1 571598 R 984892 CDS YP_006014670.1 386318507 12610261 572315..573235 1 NC_017568.1 identified by match to protein family HMM PF01758; sodium/bile acid symporter family protein 573235 12610261 SPSE_0494 Staphylococcus pseudintermedius ED99 sodium/bile acid symporter family protein YP_006014670.1 572315 D 984892 CDS YP_006014671.1 386318508 12610262 573414..573692 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 573692 12610262 SPSE_0495 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014671.1 573414 D 984892 CDS YP_006014672.1 386318509 12610263 573772..574602 1 NC_017568.1 identified by match to protein family HMM PF00903; glyoxalase family protein 574602 12610263 SPSE_0496 Staphylococcus pseudintermedius ED99 glyoxalase family protein YP_006014672.1 573772 D 984892 CDS YP_006014673.1 386318510 12610264 574648..575292 1 NC_017568.1 identified by match to protein family HMM PF00702, match to protein family HMM TIGR01509, match to protein family HMM TIGR01549; phosphoglycolate phosphatase 575292 12610264 SPSE_0497 Staphylococcus pseudintermedius ED99 phosphoglycolate phosphatase YP_006014673.1 574648 D 984892 CDS YP_006014674.1 386318511 12610265 575289..575480 1 NC_017568.1 hypothetical protein 575480 12610265 SPSE_0498 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014674.1 575289 D 984892 CDS YP_006014675.1 386318512 12610266 complement(575695..575877) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 575877 12610266 SPSE_0499 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014675.1 575695 R 984892 CDS YP_006014676.1 386318513 12610267 complement(575884..576219) 1 NC_017568.1 hypothetical protein 576219 12610267 SPSE_0500 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014676.1 575884 R 984892 CDS YP_006014677.1 386318514 12610268 complement(576307..577149) 1 NC_017568.1 identified by match to protein family HMM PF01226; formate/nitrite transporter family protein 577149 12610268 SPSE_0501 Staphylococcus pseudintermedius ED99 formate/nitrite transporter family protein YP_006014677.1 576307 R 984892 CDS YP_006014678.1 386318515 12610269 577516..578904 1 NC_017568.1 identified by match to protein family HMM PF00324; proline-specific permease 578904 12610269 SPSE_0502 Staphylococcus pseudintermedius ED99 proline-specific permease YP_006014678.1 577516 D 984892 CDS YP_006014679.1 386318516 12610270 complement(579100..579453) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 579453 12610270 SPSE_0503 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014679.1 579100 R 984892 CDS YP_006014680.1 386318517 12610271 579597..580328 1 NC_017568.1 identified by match to protein family HMM PF02517; metal-dependent membrane protease 580328 12610271 SPSE_0504 Staphylococcus pseudintermedius ED99 metal-dependent membrane protease YP_006014680.1 579597 D 984892 CDS YP_006014681.1 386318518 12610272 complement(580382..581083) 1 NC_017568.1 identified by match to protein family HMM PF08220, match to protein family HMM PF08279; DeoR family transcriptional regulator 581083 12610272 SPSE_0505 Staphylococcus pseudintermedius ED99 DeoR family transcriptional regulator YP_006014681.1 580382 R 984892 CDS YP_006014682.1 386318519 12610273 581536..582330 1 NC_017568.1 identified by match to protein family HMM PF00459; inositol monophosphatase family protein 582330 12610273 SPSE_0506 Staphylococcus pseudintermedius ED99 inositol monophosphatase family protein YP_006014682.1 581536 D 984892 CDS YP_006014683.1 386318520 12610274 582458..583411 1 NC_017568.1 identified by match to protein family HMM PF03816, match to protein family HMM TIGR00350; transcriptional regulator 583411 12610274 SPSE_0507 Staphylococcus pseudintermedius ED99 transcriptional regulator YP_006014683.1 582458 D 984892 CDS YP_006014684.1 386318521 12610275 583641..584348 1 NC_017568.1 identified by match to protein family HMM PF06149; hypothetical protein 584348 12610275 SPSE_0508 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014684.1 583641 D 984892 CDS YP_006014685.1 386318522 12610277 585279..585920 1 NC_017568.1 identified by match to protein family HMM PF01470, match to protein family HMM TIGR00504; pyroglutamyl-peptidase I 585920 pcp 12610277 pcp Staphylococcus pseudintermedius ED99 pyroglutamyl-peptidase I YP_006014685.1 585279 D 984892 CDS YP_006014686.1 386318523 12610278 586117..589053 1 NC_017568.1 identified by match to protein family HMM PF00037, match to protein family HMM PF00111, match to protein family HMM PF00384, match to protein family HMM PF01568, match to protein family HMM PF04879, match to protein family HMM TIGR01591; formate dehydrogenase subunit alpha 589053 fdhA 12610278 fdhA Staphylococcus pseudintermedius ED99 formate dehydrogenase subunit alpha YP_006014686.1 586117 D 984892 CDS YP_006014687.1 386318524 12610279 589053..589520 1 NC_017568.1 identified by match to protein family HMM PF07849; hypothetical protein 589520 12610279 SPSE_0513 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014687.1 589053 D 984892 CDS YP_006014688.1 386318525 12610280 590126..590368 1 NC_017568.1 hypothetical protein 590368 12610280 SPSE_0514 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014688.1 590126 D 984892 CDS YP_006014689.1 386318526 12610281 590396..591175 1 NC_017568.1 identified by match to protein family HMM PF01832; glucosaminidase 591175 12610281 SPSE_0515 Staphylococcus pseudintermedius ED99 glucosaminidase YP_006014689.1 590396 D 984892 CDS YP_006014690.1 386318527 12610282 591195..592322 1 NC_017568.1 identified by match to protein family HMM PF01494; putative monooxygenase 592322 12610282 SPSE_0516 Staphylococcus pseudintermedius ED99 putative monooxygenase YP_006014690.1 591195 D 984892 CDS YP_006014691.1 386318528 12610283 complement(592523..593485) 1 NC_017568.1 identified by match to protein family HMM PF00389, match to protein family HMM PF02826; glyoxylate reductase 593485 12610283 SPSE_0517 Staphylococcus pseudintermedius ED99 glyoxylate reductase YP_006014691.1 592523 R 984892 CDS YP_006014692.1 386318529 12610284 complement(593549..593863) 1 NC_017568.1 identified by match to protein family HMM PF00893; SMR-type multidrug efflux transporter 593863 12610284 SPSE_0518 Staphylococcus pseudintermedius ED99 SMR-type multidrug efflux transporter YP_006014692.1 593549 R 984892 CDS YP_006014693.1 386318530 12610285 complement(593860..594186) 1 NC_017568.1 identified by match to protein family HMM PF00893; SMR-type multidrug efflux transporter 594186 12610285 SPSE_0519 Staphylococcus pseudintermedius ED99 SMR-type multidrug efflux transporter YP_006014693.1 593860 R 984892 CDS YP_006014694.1 386318531 12610286 complement(594497..595075) 1 NC_017568.1 identified by match to protein family HMM PF05257; secretory antigen precursor SsaA 595075 12610286 SPSE_0520 Staphylococcus pseudintermedius ED99 secretory antigen precursor SsaA YP_006014694.1 594497 R 984892 CDS YP_006014695.1 386318532 12610287 595721..596797 1 NC_017568.1 identified by match to protein family HMM PF01210, match to protein family HMM PF02317; NAD/NADP octopine/nopaline dehydrogenase family protein 596797 12610287 SPSE_0521 Staphylococcus pseudintermedius ED99 NAD/NADP octopine/nopaline dehydrogenase family protein YP_006014695.1 595721 D 984892 CDS YP_006014696.1 386318533 12610288 596823..598220 1 NC_017568.1 identified by match to protein family HMM PF03553, match to protein family HMM TIGR00931; Na+/H+ antiporter 598220 12610288 SPSE_0522 Staphylococcus pseudintermedius ED99 Na+/H+ antiporter YP_006014696.1 596823 D 984892 CDS YP_006014697.1 386318534 12610289 598492..598968 1 NC_017568.1 hypothetical protein 598968 12610289 SPSE_0523 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014697.1 598492 D 984892 CDS YP_006014698.1 386318535 12610290 complement(599132..599860) 1 NC_017568.1 identified by match to protein family HMM PF05257; secretory antigen precursor SsaA 599860 12610290 SPSE_0524 Staphylococcus pseudintermedius ED99 secretory antigen precursor SsaA YP_006014698.1 599132 R 984892 CDS YP_006014699.1 386318536 12610291 600565..601617 1 NC_017568.1 identified by match to protein family HMM PF00296; oxidoreductase 601617 12610291 SPSE_0525 Staphylococcus pseudintermedius ED99 oxidoreductase YP_006014699.1 600565 D 984892 CDS YP_006014700.1 386318537 12610292 601631..601984 1 NC_017568.1 hypothetical protein 601984 12610292 SPSE_0526 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014700.1 601631 D 984892 CDS YP_006014701.1 386318538 12610293 602447..602794 1 NC_017568.1 identified by match to protein family HMM PF01047, match to protein family HMM TIGR01889; staphylococcal accessory regulator SarR 602794 sarR 12610293 sarR Staphylococcus pseudintermedius ED99 staphylococcal accessory regulator SarR YP_006014701.1 602447 D 984892 CDS YP_006014702.1 386318539 12610294 603064..603210 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 603210 12610294 SPSE_0528 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014702.1 603064 D 984892 CDS YP_006014703.1 386318540 12610295 603232..604392 1 NC_017568.1 identified by match to protein family HMM PF00441, match to protein family HMM PF02770, match to protein family HMM PF08028; acyl-CoA dehydrogenase 604392 12610295 SPSE_0529 Staphylococcus pseudintermedius ED99 acyl-CoA dehydrogenase YP_006014703.1 603232 D 984892 CDS YP_006014704.1 386318541 12610296 604516..604893 1 NC_017568.1 identified by match to protein family HMM PF04304; hypothetical protein 604893 12610296 SPSE_0530 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014704.1 604516 D 984892 CDS YP_006014705.1 386318542 12610297 605163..606086 1 NC_017568.1 identified by match to protein family HMM PF01497; ABC-type cobalamin Fe3+-siderophores transport system periplasmic component 606086 12610297 SPSE_0531 Staphylococcus pseudintermedius ED99 ABC-type cobalamin Fe3+-siderophores transport system periplasmic component YP_006014705.1 605163 D 984892 CDS YP_006014706.1 386318543 12610298 complement(606538..608064) 1 NC_017568.1 identified by match to protein family HMM PF00474, match to protein family HMM TIGR00813; sodium:solute symporter family protein 608064 12610298 SPSE_0532 Staphylococcus pseudintermedius ED99 sodium:solute symporter family protein YP_006014706.1 606538 R 984892 CDS YP_006014707.1 386318544 12610299 complement(608206..609087) 1 NC_017568.1 identified by match to protein family HMM PF00701; N-acetylneuraminate lyase 609087 12610299 SPSE_0533 Staphylococcus pseudintermedius ED99 N-acetylneuraminate lyase YP_006014707.1 608206 R 984892 CDS YP_006014708.1 386318545 12610300 609245..609916 1 NC_017568.1 identified by match to protein family HMM PF00392, match to protein family HMM PF07729; GntR family transcriptional regulator 609916 12610300 SPSE_0534 Staphylococcus pseudintermedius ED99 GntR family transcriptional regulator YP_006014708.1 609245 D 984892 CDS YP_006014709.1 386318546 12610301 609897..610760 1 NC_017568.1 identified by match to protein family HMM PF00480; putative kinase 610760 12610301 SPSE_0535 Staphylococcus pseudintermedius ED99 putative kinase YP_006014709.1 609897 D 984892 CDS YP_006014710.1 386318547 12610302 610841..611401 1 NC_017568.1 identified by match to protein family HMM PF02632; BioY family protein 611401 12610302 SPSE_0536 Staphylococcus pseudintermedius ED99 BioY family protein YP_006014710.1 610841 D 984892 CDS YP_006014711.1 386318548 12610303 611424..612197 1 NC_017568.1 identified by match to protein family HMM PF00583; GNAT family acetyltransferase 612197 12610303 SPSE_0537 Staphylococcus pseudintermedius ED99 GNAT family acetyltransferase YP_006014711.1 611424 D 984892 CDS YP_006014712.1 386318549 12610304 complement(612275..613072) 1 NC_017568.1 identified by match to protein family HMM PF02634, match to protein family HMM TIGR00129; formate dehydrogenase family accessory protein FdhD 613072 fdhD 12610304 fdhD Staphylococcus pseudintermedius ED99 formate dehydrogenase family accessory protein FdhD YP_006014712.1 612275 R 984892 CDS YP_006014713.1 386318550 12610305 613234..614265 1 NC_017568.1 identified by match to protein family HMM PF00356; galactose operon repressor 614265 galR 12610305 galR Staphylococcus pseudintermedius ED99 galactose operon repressor YP_006014713.1 613234 D 984892 CDS YP_006014714.1 386318551 12610306 614308..615474 1 NC_017568.1 identified by match to protein family HMM PF00288, match to protein family HMM PF08544, match to protein family HMM TIGR00131; galactokinase 615474 galK 12610306 galK Staphylococcus pseudintermedius ED99 galactokinase YP_006014714.1 614308 D 984892 CDS YP_006014715.1 386318552 12610307 615490..616482 1 NC_017568.1 identified by match to protein family HMM PF00106, match to protein family HMM PF01073, match to protein family HMM PF01370, match to protein family HMM PF02719, match to protein family HMM PF04321, match to protein family HMM TIGR01179; UDP-glucose 4-epimerase 616482 galE 12610307 galE Staphylococcus pseudintermedius ED99 UDP-glucose 4-epimerase YP_006014715.1 615490 D 984892 CDS YP_006014716.1 386318553 12610308 616495..617994 1 NC_017568.1 identified by match to protein family HMM PF01087, match to protein family HMM PF02744, match to protein family HMM TIGR01239; galactose-1-phosphate uridylyltransferase 617994 galT 12610308 galT Staphylococcus pseudintermedius ED99 galactose-1-phosphate uridylyltransferase YP_006014716.1 616495 D 984892 CDS YP_006014717.1 386318554 12610309 618085..618858 1 NC_017568.1 identified by match to protein family HMM PF01547, match to protein family HMM TIGR01256; molybdate ABC transporter periplasmic molybdate-binding protein 618858 modA 12610309 modA Staphylococcus pseudintermedius ED99 molybdate ABC transporter periplasmic molybdate-binding protein YP_006014717.1 618085 D 984892 CDS YP_006014718.1 386318555 12610310 618868..619539 1 NC_017568.1 identified by match to protein family HMM PF00528, match to protein family HMM TIGR02141; molybdate ABC transporter permease 619539 modB 12610310 modB Staphylococcus pseudintermedius ED99 molybdate ABC transporter permease YP_006014718.1 618868 D 984892 CDS YP_006014719.1 386318556 12610311 619540..620145 1 NC_017568.1 identified by match to protein family HMM PF00005; molybdenum import ATP-binding protein 620145 modC 12610311 modC Staphylococcus pseudintermedius ED99 molybdenum import ATP-binding protein YP_006014719.1 619540 D 984892 CDS YP_006014720.1 386318557 12610312 620437..621441 1 NC_017568.1 identified by match to protein family HMM PF00899, match to protein family HMM PF05237; molybdopterin biosynthesis protein 621441 moeB 12610312 moeB Staphylococcus pseudintermedius ED99 molybdopterin biosynthesis protein YP_006014720.1 620437 D 984892 CDS YP_006014721.1 386318558 12610313 621457..621957 1 NC_017568.1 identified by match to protein family HMM PF00994, match to protein family HMM TIGR00177; molybdenum cofactor biosynthesis protein B 621957 moaB 12610313 moaB Staphylococcus pseudintermedius ED99 molybdenum cofactor biosynthesis protein B YP_006014721.1 621457 D 984892 CDS YP_006014722.1 386318559 12610314 complement(622217..622702) 1 NC_017568.1 identified by match to protein family HMM PF01967, match to protein family HMM TIGR00581; molybdenum cofactor biosynthesis protein C 622702 moaC 12610314 moaC Staphylococcus pseudintermedius ED99 molybdenum cofactor biosynthesis protein C YP_006014722.1 622217 R 984892 CDS YP_006014723.1 386318560 12610315 622773..624032 1 NC_017568.1 identified by match to protein family HMM PF00994, match to protein family HMM PF03453, match to protein family HMM PF03454, match to protein family HMM TIGR00177; molybdopterin biosynthesis protein 624032 moeA 12610315 moeA Staphylococcus pseudintermedius ED99 molybdopterin biosynthesis protein YP_006014723.1 622773 D 984892 CDS YP_006014724.1 386318561 12610316 624029..624505 1 NC_017568.1 identified by match to protein family HMM PF03205, match to protein family HMM TIGR00176; molybdopterin-guanine dinucleotide biosynthesis protein MobB 624505 mobB 12610316 mobB Staphylococcus pseudintermedius ED99 molybdopterin-guanine dinucleotide biosynthesis protein MobB YP_006014724.1 624029 D 984892 CDS YP_006014725.1 386318562 12610317 624511..624969 1 NC_017568.1 identified by match to protein family HMM PF02391; molybdopterin converting factor subunit 2 624969 moaE 12610317 moaE Staphylococcus pseudintermedius ED99 molybdopterin converting factor subunit 2 YP_006014725.1 624511 D 984892 CDS YP_006014726.1 386318563 12610318 624966..625199 1 NC_017568.1 identified by match to protein family HMM PF02597; molybdopterin converting factor subunit 1 625199 moaD 12610318 moaD Staphylococcus pseudintermedius ED99 molybdopterin converting factor subunit 1 YP_006014726.1 624966 D 984892 CDS YP_006014727.1 386318564 12610319 625209..625814 1 NC_017568.1 molybdopterin-guanine dinucleotide biosynthesis protein MobA 625814 mobA 12610319 mobA Staphylococcus pseudintermedius ED99 molybdopterin-guanine dinucleotide biosynthesis protein MobA YP_006014727.1 625209 D 984892 CDS YP_006014728.1 386318565 12610320 625831..626853 1 NC_017568.1 identified by match to protein family HMM PF04055, match to protein family HMM PF06463, match to protein family HMM TIGR02666; molybdenum cofactor biosynthesis protein A 626853 moaA 12610320 moaA Staphylococcus pseudintermedius ED99 molybdenum cofactor biosynthesis protein A YP_006014728.1 625831 D 984892 CDS YP_006014729.1 386318566 12610321 complement(626930..628801) 1 NC_017568.1 identified by match to protein family HMM PF03372; endonuclease/exonuclease/phosphatase family protein 628801 12610321 SPSE_0555 Staphylococcus pseudintermedius ED99 endonuclease/exonuclease/phosphatase family protein YP_006014729.1 626930 R 984892 CDS YP_006014730.1 386318567 12610322 complement(629297..629743) 1 NC_017568.1 identified by match to protein family HMM PF01047; MarR family transcriptional regulator 629743 12610322 SPSE_0556 Staphylococcus pseudintermedius ED99 MarR family transcriptional regulator YP_006014730.1 629297 R 984892 CDS YP_006014731.1 386318568 12610323 629917..630684 1 NC_017568.1 hypothetical protein 630684 12610323 SPSE_0557 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014731.1 629917 D 984892 CDS YP_006014732.1 386318569 12610324 complement(630675..630929) 1 NC_017568.1 hypothetical protein 630929 12610324 SPSE_0558 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014732.1 630675 R 984892 CDS YP_006014733.1 386318570 12610325 631046..632326 1 NC_017568.1 identified by match to protein family HMM PF02388; aminoacyltransferase FemX 632326 femX 12610325 femX Staphylococcus pseudintermedius ED99 aminoacyltransferase FemX YP_006014733.1 631046 D 984892 CDS YP_006014734.1 386318571 12610326 632545..635697 1 NC_017568.1 identified by match to protein family HMM PF00873; AcrB/AcrD/AcrF family protein 635697 12610326 SPSE_0560 Staphylococcus pseudintermedius ED99 AcrB/AcrD/AcrF family protein YP_006014734.1 632545 D 984892 CDS YP_006014735.1 386318572 12610327 635901..637058 1 NC_017568.1 identified by match to protein family HMM PF00155; class I aminotransferase 637058 12610327 SPSE_0561 Staphylococcus pseudintermedius ED99 class I aminotransferase YP_006014735.1 635901 D 984892 CDS YP_006014736.1 386318573 12610328 complement(637198..637515) 1 NC_017568.1 hypothetical protein 637515 12610328 SPSE_0562 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014736.1 637198 R 984892 CDS YP_006014737.1 386318574 12610329 complement(637585..637755) 1 NC_017568.1 hypothetical protein 637755 12610329 SPSE_0563 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014737.1 637585 R 984892 CDS YP_006014738.1 386318575 12610330 637862..638770 1 NC_017568.1 identified by match to protein family HMM PF03547; AEC family malonate efflux carrier 638770 12610330 SPSE_0564 Staphylococcus pseudintermedius ED99 AEC family malonate efflux carrier YP_006014738.1 637862 D 984892 CDS YP_006014739.1 386318576 12610331 complement(638852..639712) 1 NC_017568.1 identified by match to protein family HMM PF00583; GNAT family acetyltransferase 639712 12610331 SPSE_0565 Staphylococcus pseudintermedius ED99 GNAT family acetyltransferase YP_006014739.1 638852 R 984892 CDS YP_006014740.1 386318577 12610332 639853..641988 1 NC_017568.1 identified by match to protein family HMM PF01131, match to protein family HMM PF01751, match to protein family HMM TIGR01056; DNA topoisomerase III 641988 topB 12610332 topB Staphylococcus pseudintermedius ED99 DNA topoisomerase III YP_006014740.1 639853 D 984892 CDS YP_006014741.1 386318578 12610333 642109..643443 1 NC_017568.1 identified by match to protein family HMM PF00860; xanthine/uracil permease family protein 643443 12610333 SPSE_0567 Staphylococcus pseudintermedius ED99 xanthine/uracil permease family protein YP_006014741.1 642109 D 984892 CDS YP_006014742.1 386318579 12610335 complement(644784..645170) 1 NC_017568.1 hypothetical protein 645170 12610335 SPSE_0570 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014742.1 644784 R 984892 CDS YP_006014743.1 386318580 12610336 645634..645942 1 NC_017568.1 identified by match to protein family HMM PF00338, match to protein family HMM TIGR01049; 30S ribosomal protein S10 645942 rpsJ 12610336 rpsJ Staphylococcus pseudintermedius ED99 30S ribosomal protein S10 YP_006014743.1 645634 D 984892 CDS YP_006014744.1 386318581 12610337 645970..646629 1 NC_017568.1 identified by match to protein family HMM PF00297, match to protein family HMM TIGR03625; 50S ribosomal protein L3 646629 rplC 12610337 rplC Staphylococcus pseudintermedius ED99 50S ribosomal protein L3 YP_006014744.1 645970 D 984892 CDS YP_006014745.1 386318582 12610338 646656..647279 1 NC_017568.1 identified by match to protein family HMM PF00573; 50S ribosomal protein L4 647279 rplD 12610338 rplD Staphylococcus pseudintermedius ED99 50S ribosomal protein L4 YP_006014745.1 646656 D 984892 CDS YP_006014746.1 386318583 12610339 647279..647554 1 NC_017568.1 identified by match to protein family HMM PF00276; 50S ribosomal protein L23 647554 rplW 12610339 rplW Staphylococcus pseudintermedius ED99 50S ribosomal protein L23 YP_006014746.1 647279 D 984892 CDS YP_006014747.1 386318584 12610340 647586..648419 1 NC_017568.1 identified by match to protein family HMM PF00181, match to protein family HMM PF03947, match to protein family HMM TIGR01171; 50S ribosomal protein L2 648419 rplB 12610340 rplB Staphylococcus pseudintermedius ED99 50S ribosomal protein L2 YP_006014747.1 647586 D 984892 CDS YP_006014748.1 386318585 12610341 648484..648762 1 NC_017568.1 identified by match to protein family HMM PF00203, match to protein family HMM TIGR01050; 30S ribosomal protein S19 648762 rpsS 12610341 rpsS Staphylococcus pseudintermedius ED99 30S ribosomal protein S19 YP_006014748.1 648484 D 984892 CDS YP_006014749.1 386318586 12610342 648796..649149 1 NC_017568.1 identified by match to protein family HMM PF00237, match to protein family HMM TIGR01044; 50S ribosomal protein L22 649149 rplV 12610342 rplV Staphylococcus pseudintermedius ED99 50S ribosomal protein L22 YP_006014749.1 648796 D 984892 CDS YP_006014750.1 386318587 12610343 649173..649826 1 NC_017568.1 identified by match to protein family HMM PF00189, match to protein family HMM PF00417, match to protein family HMM PF07650, match to protein family HMM TIGR01009; 30S ribosomal protein S3 649826 rpsC 12610343 rpsC Staphylococcus pseudintermedius ED99 30S ribosomal protein S3 YP_006014750.1 649173 D 984892 CDS YP_006014751.1 386318588 12610344 649829..650263 1 NC_017568.1 identified by match to protein family HMM PF00252, match to protein family HMM TIGR01164; 50S ribosomal protein L16 650263 rplP 12610344 rplP Staphylococcus pseudintermedius ED99 50S ribosomal protein L16 YP_006014751.1 649829 D 984892 CDS YP_006014752.1 386318589 12610345 650253..650462 1 NC_017568.1 identified by match to protein family HMM PF00831, match to protein family HMM TIGR00012; 50S ribosomal protein L29 650462 rpmC 12610345 rpmC Staphylococcus pseudintermedius ED99 50S ribosomal protein L29 YP_006014752.1 650253 D 984892 CDS YP_006014753.1 386318590 12610346 650488..650751 1 NC_017568.1 identified by match to protein family HMM PF00366, match to protein family HMM TIGR03635; 30S ribosomal protein S17 650751 rpsQ 12610346 rpsQ Staphylococcus pseudintermedius ED99 30S ribosomal protein S17 YP_006014753.1 650488 D 984892 CDS YP_006014754.1 386318591 12610347 650780..651148 1 NC_017568.1 identified by match to protein family HMM PF00238, match to protein family HMM TIGR01067; 50S ribosomal protein L14 651148 rplN 12610347 rplN Staphylococcus pseudintermedius ED99 50S ribosomal protein L14 YP_006014754.1 650780 D 984892 CDS YP_006014755.1 386318592 12610348 651192..651506 1 NC_017568.1 identified by match to protein family HMM PF00467, match to protein family HMM TIGR01079; 50S ribosomal protein L24 651506 rplX 12610348 rplX Staphylococcus pseudintermedius ED99 50S ribosomal protein L24 YP_006014755.1 651192 D 984892 CDS YP_006014756.1 386318593 12610349 651532..652071 1 NC_017568.1 identified by match to protein family HMM PF00281, match to protein family HMM PF00673; 50S ribosomal protein L5 652071 rplE 12610349 rplE Staphylococcus pseudintermedius ED99 50S ribosomal protein L5 YP_006014756.1 651532 D 984892 CDS YP_006014757.1 386318594 12610350 652093..652278 1 NC_017568.1 identified by match to protein family HMM PF00253; ribosomal protein S14 type Z 652278 rpsZ 12610350 rpsZ Staphylococcus pseudintermedius ED99 ribosomal protein S14 type Z YP_006014757.1 652093 D 984892 CDS YP_006014758.1 386318595 12610351 652309..652707 1 NC_017568.1 identified by match to protein family HMM PF00410; 30S ribosomal protein S8 652707 rpsH 12610351 rpsH Staphylococcus pseudintermedius ED99 30S ribosomal protein S8 YP_006014758.1 652309 D 984892 CDS YP_006014759.1 386318596 12610352 652736..653272 1 NC_017568.1 identified by match to protein family HMM PF00347, match to protein family HMM TIGR03654; 50S ribosomal protein L6 653272 rplF 12610352 rplF Staphylococcus pseudintermedius ED99 50S ribosomal protein L6 YP_006014759.1 652736 D 984892 CDS YP_006014760.1 386318597 12610353 653304..653663 1 NC_017568.1 identified by match to protein family HMM PF00861, match to protein family HMM TIGR00060; 50S ribosomal protein L18 653663 rplR 12610353 rplR Staphylococcus pseudintermedius ED99 50S ribosomal protein L18 YP_006014760.1 653304 D 984892 CDS YP_006014761.1 386318598 12610354 653686..654186 1 NC_017568.1 identified by match to protein family HMM PF00333, match to protein family HMM PF03719, match to protein family HMM TIGR01021; 30S ribosomal protein S5 654186 rpsE 12610354 rpsE Staphylococcus pseudintermedius ED99 30S ribosomal protein S5 YP_006014761.1 653686 D 984892 CDS YP_006014762.1 386318599 12610355 654203..654382 1 NC_017568.1 identified by match to protein family HMM PF00327, match to protein family HMM TIGR01308; 50S ribosomal protein L30 654382 rpmD 12610355 rpmD Staphylococcus pseudintermedius ED99 50S ribosomal protein L30 YP_006014762.1 654203 D 984892 CDS YP_006014763.1 386318600 12610356 654399..654839 1 NC_017568.1 identified by match to protein family HMM PF00256, match to protein family HMM PF01305, match to protein family HMM TIGR01071; 50S ribosomal protein L15 654839 rplO 12610356 rplO Staphylococcus pseudintermedius ED99 50S ribosomal protein L15 YP_006014763.1 654399 D 984892 CDS YP_006014764.1 386318601 12610357 654839..656131 1 NC_017568.1 identified by match to protein family HMM PF00344, match to protein family HMM TIGR00967; preprotein translocase subunit SecY 656131 secY 12610357 secY Staphylococcus pseudintermedius ED99 preprotein translocase subunit SecY YP_006014764.1 654839 D 984892 CDS YP_006014765.1 386318602 12610358 656149..656802 1 NC_017568.1 identified by match to protein family HMM PF00406, match to protein family HMM PF05191, match to protein family HMM TIGR01351; adenylate kinase 656802 adk 12610358 adk Staphylococcus pseudintermedius ED99 adenylate kinase YP_006014765.1 656149 D 984892 CDS YP_006014766.1 386318603 12610359 656969..657187 1 NC_017568.1 identified by match to protein family HMM PF00575, match to protein family HMM PF01176, match to protein family HMM TIGR00008; translation initiation factor IF-1 657187 infA 12610359 infA Staphylococcus pseudintermedius ED99 translation initiation factor IF-1 YP_006014766.1 656969 D 984892 CDS YP_006014767.1 386318604 12610360 657219..657332 1 NC_017568.1 identified by match to protein family HMM PF00444, match to protein family HMM TIGR01022; 50S ribosomal protein L36 657332 rpmJ 12610360 rpmJ Staphylococcus pseudintermedius ED99 50S ribosomal protein L36 YP_006014767.1 657219 D 984892 CDS YP_006014768.1 386318605 12610361 657356..657721 1 NC_017568.1 identified by match to protein family HMM PF00416, match to protein family HMM TIGR03631; 30S ribosomal protein S13 657721 rpsM 12610361 rpsM Staphylococcus pseudintermedius ED99 30S ribosomal protein S13 YP_006014768.1 657356 D 984892 CDS YP_006014769.1 386318606 12610362 657746..658135 1 NC_017568.1 identified by match to protein family HMM PF00411, match to protein family HMM TIGR03632; 30S ribosomal protein S11 658135 rpsK 12610362 rpsK Staphylococcus pseudintermedius ED99 30S ribosomal protein S11 YP_006014769.1 657746 D 984892 CDS YP_006014770.1 386318607 12610363 658211..659155 1 NC_017568.1 identified by match to protein family HMM PF01000, match to protein family HMM PF01193, match to protein family HMM PF03118, match to protein family HMM TIGR02027; DNA-directed RNA polymerase subunit alpha 659155 rpoA 12610363 rpoA Staphylococcus pseudintermedius ED99 DNA-directed RNA polymerase subunit alpha YP_006014770.1 658211 D 984892 CDS YP_006014771.1 386318608 12610364 659172..659540 1 NC_017568.1 identified by match to protein family HMM PF01196, match to protein family HMM TIGR00059; 50S ribosomal protein L17 659540 rplQ 12610364 rplQ Staphylococcus pseudintermedius ED99 50S ribosomal protein L17 YP_006014771.1 659172 D 984892 CDS YP_006014772.1 386318609 12610365 660021..660830 1 NC_017568.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 660830 12610365 SPSE_0600 Staphylococcus pseudintermedius ED99 ABC transporter ATP-binding protein YP_006014772.1 660021 D 984892 CDS YP_006014773.1 386318610 12610366 660827..661693 1 NC_017568.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 661693 12610366 SPSE_0601 Staphylococcus pseudintermedius ED99 ABC transporter ATP-binding protein YP_006014773.1 660827 D 984892 CDS YP_006014774.1 386318611 12610367 661683..662486 1 NC_017568.1 identified by match to protein family HMM PF02361; cobalt transport family protein 662486 12610367 SPSE_0602 Staphylococcus pseudintermedius ED99 cobalt transport family protein YP_006014774.1 661683 D 984892 CDS YP_006014775.1 386318612 12610368 662502..663305 1 NC_017568.1 identified by match to protein family HMM PF01416, match to protein family HMM TIGR00071; tRNA pseudouridine synthase A 663305 truA 12610368 truA Staphylococcus pseudintermedius ED99 tRNA pseudouridine synthase A YP_006014775.1 662502 D 984892 CDS YP_006014776.1 386318613 12610369 663514..663951 1 NC_017568.1 identified by match to protein family HMM PF00572, match to protein family HMM TIGR01066; 50S ribosomal protein L13 663951 rplM 12610369 rplM Staphylococcus pseudintermedius ED99 50S ribosomal protein L13 YP_006014776.1 663514 D 984892 CDS YP_006014777.1 386318614 12610370 663965..664363 1 NC_017568.1 identified by match to protein family HMM PF00380; 30S ribosomal protein S9 664363 rpsI 12610370 rpsI Staphylococcus pseudintermedius ED99 30S ribosomal protein S9 YP_006014777.1 663965 D 984892 CDS YP_006014778.1 386318615 12610371 664471..664611 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 664611 12610371 SPSE_0607 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014778.1 664471 D 984892 CDS YP_006014779.1 386318616 12610372 664787..666223 1 NC_017568.1 identified by match to protein family HMM PF04326; transcription regulator 666223 12610372 SPSE_0608 Staphylococcus pseudintermedius ED99 transcription regulator YP_006014779.1 664787 D 984892 CDS YP_006014780.1 386318617 12610373 666472..666651 1 NC_017568.1 hypothetical protein 666651 12610373 SPSE_0609 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014780.1 666472 D 984892 CDS YP_006014781.1 386318618 12610374 667462..668748 1 NC_017568.1 identified by match to protein family HMM PF00078, match to protein family HMM PF08388; RNA-directed DNA polymerase 668748 12610374 SPSE_0610 Staphylococcus pseudintermedius ED99 RNA-directed DNA polymerase YP_006014781.1 667462 D 984892 CDS YP_006014782.1 386318619 12610375 complement(669055..669600) 1 NC_017568.1 identified by match to protein family HMM PF00857; isochorismatase family protein 669600 12610375 SPSE_0611 Staphylococcus pseudintermedius ED99 isochorismatase family protein YP_006014782.1 669055 R 984892 CDS YP_006014783.1 386318620 12610376 669761..670210 1 NC_017568.1 hypothetical protein 670210 12610376 SPSE_0612 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014783.1 669761 D 984892 CDS YP_006014784.1 386318621 12610377 670796..671005 1 NC_017568.1 hypothetical protein 671005 12610377 SPSE_0613 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014784.1 670796 D 984892 CDS YP_006014785.1 386318622 12610378 670971..671099 1 NC_017568.1 lipoprotein 671099 12610378 SPSE_0614 Staphylococcus pseudintermedius ED99 lipoprotein YP_006014785.1 670971 D 984892 CDS YP_006014786.1 386318623 12610379 671219..671971 1 NC_017568.1 identified by match to protein family HMM PF00455, match to protein family HMM PF08220, match to protein family HMM PF08279; lactose phosphotransferase system repressor 671971 lacR 12610379 lacR Staphylococcus pseudintermedius ED99 lactose phosphotransferase system repressor YP_006014786.1 671219 D 984892 CDS YP_006014787.1 386318624 12610380 672175..672603 1 NC_017568.1 identified by match to protein family HMM PF02502, match to protein family HMM TIGR00689, match to protein family HMM TIGR01118; galactose-6-phosphate isomerase, LacA subunit 672603 lacA 12610380 lacA Staphylococcus pseudintermedius ED99 galactose-6-phosphate isomerase, LacA subunit YP_006014787.1 672175 D 984892 CDS YP_006014788.1 386318625 12610381 672619..673134 1 NC_017568.1 identified by match to protein family HMM PF02502, match to protein family HMM TIGR00689, match to protein family HMM TIGR01119; galactose-6-phosphate isomerase, LacB subunit 673134 lacB 12610381 lacB Staphylococcus pseudintermedius ED99 galactose-6-phosphate isomerase, LacB subunit YP_006014788.1 672619 D 984892 CDS YP_006014789.1 386318626 12610382 673205..674173 1 NC_017568.1 identified by match to protein family HMM PF01791, match to protein family HMM TIGR01232; tagatose 1,6-diphosphate aldolase 674173 lacD 12610382 lacD Staphylococcus pseudintermedius ED99 tagatose 1,6-diphosphate aldolase YP_006014789.1 673205 D 984892 CDS YP_006014790.1 386318627 12610383 674199..674513 1 NC_017568.1 identified by match to protein family HMM PF02255, match to protein family HMM TIGR00823; PTS system lactose-specific transporter subunit IIA 674513 lacF 12610383 lacF Staphylococcus pseudintermedius ED99 PTS system lactose-specific transporter subunit IIA YP_006014790.1 674199 D 984892 CDS YP_006014791.1 386318628 12610384 674519..676243 1 NC_017568.1 identified by match to protein family HMM PF02302, match to protein family HMM PF02378, match to protein family HMM TIGR00394, match to protein family HMM TIGR00410, match to protein family HMM TIGR00853; PTS system, lactose-specific IIC component 676243 lacE 12610384 lacE Staphylococcus pseudintermedius ED99 PTS system, lactose-specific IIC component YP_006014791.1 674519 D 984892 CDS YP_006014792.1 386318629 12610385 676261..677667 1 NC_017568.1 identified by match to protein family HMM PF00232, match to protein family HMM TIGR01233; 6-phospho-beta-galactosidase 677667 lacG 12610385 lacG Staphylococcus pseudintermedius ED99 6-phospho-beta-galactosidase YP_006014792.1 676261 D 984892 CDS YP_006014793.1 386318630 12610386 677897..681901 1 NC_017568.1 identified by match to protein family HMM TIGR01865; CRISPR-associated protein, Csn1 family 681901 csn 12610386 csn Staphylococcus pseudintermedius ED99 CRISPR-associated protein, Csn1 family YP_006014793.1 677897 D 984892 CDS YP_006014794.1 386318631 12610387 681891..682766 1 NC_017568.1 identified by match to protein family HMM TIGR00287, match to protein family HMM TIGR03639; CRISPR-associated protein Cas1 682766 cas1 12610387 cas1 Staphylococcus pseudintermedius ED99 CRISPR-associated protein Cas1 YP_006014794.1 681891 D 984892 CDS YP_006014795.1 386318632 12610388 682847..683140 1 NC_017568.1 CRISPR-associated protein Cas2 683140 cas2 12610388 cas2 Staphylococcus pseudintermedius ED99 CRISPR-associated protein Cas2 YP_006014795.1 682847 D 984892 CDS YP_006014796.1 386318633 12610389 683137..683985 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 683985 12610389 SPSE_0625 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014796.1 683137 D 984892 CDS YP_006014797.1 386318634 12610390 685879..686889 1 NC_017568.1 identified by match to protein family HMM PF00107, match to protein family HMM PF08240, match to protein family HMM TIGR02817; zinc-binding alcohol dehydrogenase family protein 686889 12610390 SPSE_0626 Staphylococcus pseudintermedius ED99 zinc-binding alcohol dehydrogenase family protein YP_006014797.1 685879 D 984892 CDS YP_006014798.1 386318635 12610391 686946..688466 1 NC_017568.1 identified by match to protein family HMM PF02028, match to protein family HMM TIGR00842; glycine betaine transporter 688466 opuD1 12610391 opuD1 Staphylococcus pseudintermedius ED99 glycine betaine transporter YP_006014798.1 686946 D 984892 CDS YP_006014799.1 386318636 12610392 688742..689290 1 NC_017568.1 hypothetical protein 689290 12610392 SPSE_0628 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014799.1 688742 D 984892 CDS YP_006014800.1 386318637 12610393 689303..689548 1 NC_017568.1 hypothetical protein 689548 12610393 SPSE_0629 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014800.1 689303 D 984892 CDS YP_006014801.1 386318638 12610394 689602..690093 1 NC_017568.1 identified by match to protein family HMM PF03780; alkaline shock protein 23 690093 12610394 SPSE_0630 Staphylococcus pseudintermedius ED99 alkaline shock protein 23 YP_006014801.1 689602 D 984892 CDS YP_006014802.1 386318639 12610395 complement(690168..691313) 1 NC_017568.1 identified by match to protein family HMM PF07690; major facilitator family transporter 691313 12610395 SPSE_0631 Staphylococcus pseudintermedius ED99 major facilitator family transporter YP_006014802.1 690168 R 984892 CDS YP_006014803.1 386318640 12610396 complement(691437..693392) 1 NC_017568.1 identified by match to protein family HMM PF04183; siderophore biosynthesis protein, IucA/IucC family 693392 12610396 SPSE_0632 Staphylococcus pseudintermedius ED99 siderophore biosynthesis protein, IucA/IucC family YP_006014803.1 691437 R 984892 CDS YP_006014804.1 386318641 12610397 693493..694677 1 NC_017568.1 identified by match to protein family HMM PF07690; major facilitator family transporter 694677 12610397 SPSE_0633 Staphylococcus pseudintermedius ED99 major facilitator family transporter YP_006014804.1 693493 D 984892 CDS YP_006014805.1 386318642 12610398 694661..696424 1 NC_017568.1 identified by match to protein family HMM PF04183; siderophore biosynthesis protein, IucA/IucC family protein 696424 12610398 SPSE_0634 Staphylococcus pseudintermedius ED99 siderophore biosynthesis protein, IucA/IucC family protein YP_006014805.1 694661 D 984892 CDS YP_006014806.1 386318643 12610399 696428..697504 1 NC_017568.1 identified by match to protein family HMM PF01168; amino acid racemase 697504 12610399 SPSE_0635 Staphylococcus pseudintermedius ED99 amino acid racemase YP_006014806.1 696428 D 984892 CDS YP_006014807.1 386318644 12610400 697574..698563 1 NC_017568.1 identified by match to protein family HMM PF01497; iron compound ABC transporter substrate-binding protein 698563 12610400 SPSE_0636 Staphylococcus pseudintermedius ED99 iron compound ABC transporter substrate-binding protein YP_006014807.1 697574 D 984892 CDS YP_006014808.1 386318645 12610401 698707..699732 1 NC_017568.1 identified by match to protein family HMM PF01032; iron compound ABC transporter permease 699732 12610401 SPSE_0637 Staphylococcus pseudintermedius ED99 iron compound ABC transporter permease YP_006014808.1 698707 D 984892 CDS YP_006014809.1 386318646 12610402 699729..700691 1 NC_017568.1 identified by match to protein family HMM PF01032; iron compound ABC transporter permease 700691 12610402 SPSE_0638 Staphylococcus pseudintermedius ED99 iron compound ABC transporter permease YP_006014809.1 699729 D 984892 CDS YP_006014810.1 386318647 12610403 700812..702182 1 NC_017568.1 identified by match to protein family HMM PF07670; transporter gate domain protein 702182 12610403 SPSE_0639 Staphylococcus pseudintermedius ED99 transporter gate domain protein YP_006014810.1 700812 D 984892 CDS YP_006014811.1 386318648 12610404 complement(702666..702926) 1 NC_017568.1 hypothetical protein 702926 12610404 SPSE_0640 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014811.1 702666 R 984892 CDS YP_006014812.1 386318649 12610405 703116..703622 1 NC_017568.1 identified by match to protein family HMM PF04307; membrane bound metal dependent hydrolase 703622 12610405 SPSE_0641 Staphylococcus pseudintermedius ED99 membrane bound metal dependent hydrolase YP_006014812.1 703116 D 984892 CDS YP_006014813.1 386318650 12610406 703695..704885 1 NC_017568.1 identified by match to protein family HMM PF01704; UDP-N-acetylglucosamine pyrophosphorylase 704885 12610406 SPSE_0642 Staphylococcus pseudintermedius ED99 UDP-N-acetylglucosamine pyrophosphorylase YP_006014813.1 703695 D 984892 CDS YP_006014814.1 386318651 12610407 704896..705576 1 NC_017568.1 identified by match to protein family HMM PF03006, match to protein family HMM TIGR01065; hemolysin III 705576 12610407 SPSE_0643 Staphylococcus pseudintermedius ED99 hemolysin III YP_006014814.1 704896 D 984892 CDS YP_006014815.1 386318652 12610408 705589..705786 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 705786 12610408 SPSE_0644 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014815.1 705589 D 984892 CDS YP_006014816.1 386318653 12610409 706339..707682 1 NC_017568.1 identified by match to protein family HMM PF07690; multidrug resistance transporter protein 707682 12610409 SPSE_0645 Staphylococcus pseudintermedius ED99 multidrug resistance transporter protein YP_006014816.1 706339 D 984892 CDS YP_006014817.1 386318654 12610410 707708..708169 1 NC_017568.1 hypothetical protein 708169 12610410 SPSE_0646 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014817.1 707708 D 984892 CDS YP_006014818.1 386318655 12610411 708275..709723 1 NC_017568.1 identified by match to protein family HMM PF07690, match to protein family HMM TIGR00711; multidrug resistance transporter protein 709723 12610411 SPSE_0647 Staphylococcus pseudintermedius ED99 multidrug resistance transporter protein YP_006014818.1 708275 D 984892 CDS YP_006014819.1 386318656 12610412 710042..711106 1 NC_017568.1 ATP-binding protein, Mrp/Nbp35 family 711106 12610412 SPSE_0648 Staphylococcus pseudintermedius ED99 ATP-binding protein, Mrp/Nbp35 family YP_006014819.1 710042 D 984892 CDS YP_006014820.1 386318657 12610422 717571..718476 1 NC_017568.1 identified by match to protein family HMM PF00491, match to protein family HMM TIGR01229; arginase 718476 rocF 12610422 rocF Staphylococcus pseudintermedius ED99 arginase YP_006014820.1 717571 D 984892 CDS YP_006014821.1 386318658 12610423 718708..719514 1 NC_017568.1 identified by match to protein family HMM PF02457, match to protein family HMM TIGR00159; hypothetical protein 719514 12610423 SPSE_0659 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014821.1 718708 D 984892 CDS YP_006014822.1 386318659 12610424 719515..720447 1 NC_017568.1 identified by match to protein family HMM PF07949; hypothetical protein 720447 12610424 SPSE_0660 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014822.1 719515 D 984892 CDS YP_006014823.1 386318660 12610425 720475..721830 1 NC_017568.1 identified by match to protein family HMM PF00408, match to protein family HMM PF02878, match to protein family HMM PF02879, match to protein family HMM PF02880, match to protein family HMM TIGR01455; phosphoglucosamine mutase 721830 glmM 12610425 glmM Staphylococcus pseudintermedius ED99 phosphoglucosamine mutase YP_006014823.1 720475 D 984892 CDS YP_006014824.1 386318661 12610426 complement(721954..723060) 1 NC_017568.1 identified by match to protein family HMM PF01232, match to protein family HMM PF08125; mannitol-1-phosphate 5-dehydrogenase 723060 mtlD 12610426 mtlD Staphylococcus pseudintermedius ED99 mannitol-1-phosphate 5-dehydrogenase YP_006014824.1 721954 R 984892 CDS YP_006014825.1 386318662 12610427 complement(723060..723494) 1 NC_017568.1 identified by match to protein family HMM PF00359; PTS system mannitol-specific IIA component 723494 12610427 SPSE_0663 Staphylococcus pseudintermedius ED99 PTS system mannitol-specific IIA component YP_006014825.1 723060 R 984892 CDS YP_006014826.1 386318663 12610428 complement(723511..725541) 1 NC_017568.1 identified by match to protein family HMM PF00874, match to protein family HMM PF08279; BglG family transcriptional antiterminator 725541 12610428 SPSE_0664 Staphylococcus pseudintermedius ED99 BglG family transcriptional antiterminator YP_006014826.1 723511 R 984892 CDS YP_006014827.1 386318664 12610429 complement(725572..727137) 1 NC_017568.1 identified by match to protein family HMM PF02302, match to protein family HMM PF02378, match to protein family HMM TIGR00851; PTS system mannitol-specific IIBC component 727137 12610429 SPSE_0665 Staphylococcus pseudintermedius ED99 PTS system mannitol-specific IIBC component YP_006014827.1 725572 R 984892 CDS YP_006014828.1 386318665 12610431 728070..729872 1 NC_017568.1 identified by match to protein family HMM PF00310, match to protein family HMM PF01380, match to protein family HMM TIGR01135; glutamine-fructose-6-phosphate transaminase 729872 glmS 12610431 glmS Staphylococcus pseudintermedius ED99 glutamine-fructose-6-phosphate transaminase YP_006014828.1 728070 D 984892 CDS YP_006014829.1 386318666 12610432 730408..730992 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 730992 12610432 SPSE_0668 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014829.1 730408 D 984892 CDS YP_006014830.1 386318667 12610433 731004..731942 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 731942 12610433 SPSE_0669 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014830.1 731004 D 984892 CDS YP_006014831.1 386318668 12610434 732112..732378 1 NC_017568.1 hypothetical protein 732378 12610434 SPSE_0670 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014831.1 732112 D 984892 CDS YP_006014832.1 386318669 12610435 732486..733265 1 NC_017568.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 733265 12610435 SPSE_0671 Staphylococcus pseudintermedius ED99 ABC transporter ATP-binding protein YP_006014832.1 732486 D 984892 CDS YP_006014833.1 386318670 12610436 733340..734194 1 NC_017568.1 identified by match to protein family HMM PF00702, match to protein family HMM PF08282, match to protein family HMM TIGR00099, match to protein family HMM TIGR01484; cof family hydrolase 734194 12610436 SPSE_0672 Staphylococcus pseudintermedius ED99 cof family hydrolase YP_006014833.1 733340 D 984892 CDS YP_006014834.1 386318671 12610437 complement(734597..735502) 1 NC_017568.1 lytic regulatory protein 735502 12610437 SPSE_0673 Staphylococcus pseudintermedius ED99 lytic regulatory protein YP_006014834.1 734597 R 984892 CDS YP_006014835.1 386318672 12610438 735688..736392 1 NC_017568.1 identified by match to protein family HMM PF00392, match to protein family HMM PF07729; GntR family transcriptional regulator 736392 12610438 SPSE_0674 Staphylococcus pseudintermedius ED99 GntR family transcriptional regulator YP_006014835.1 735688 D 984892 CDS YP_006014836.1 386318673 12610439 736799..737737 1 NC_017568.1 identified by match to protein family HMM PF01238, match to protein family HMM TIGR00218; mannose-6-phosphate isomerase 737737 manA 12610439 manA Staphylococcus pseudintermedius ED99 mannose-6-phosphate isomerase YP_006014836.1 736799 D 984892 CDS YP_006014837.1 386318674 12610440 737754..737990 1 NC_017568.1 hypothetical protein 737990 12610440 SPSE_0676 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014837.1 737754 D 984892 CDS YP_006014838.1 386318675 12610441 738068..739432 1 NC_017568.1 hypothetical protein 739432 12610441 SPSE_0677 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014838.1 738068 D 984892 CDS YP_006014839.1 386318676 12610442 740171..741601 1 NC_017568.1 identified by match to protein family HMM PF03553, match to protein family HMM PF03600, match to protein family HMM TIGR00931; Na+/H+ antiporter 741601 12610442 SPSE_0678 Staphylococcus pseudintermedius ED99 Na+/H+ antiporter YP_006014839.1 740171 D 984892 CDS YP_006014840.1 386318677 12610443 741666..742070 1 NC_017568.1 hypothetical protein 742070 12610443 SPSE_0679 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014840.1 741666 D 984892 CDS YP_006014841.1 386318678 12610444 complement(742300..743010) 1 NC_017568.1 identified by match to protein family HMM PF01048, match to protein family HMM TIGR00107; purine nucleoside phosphorylase 743010 deoD 12610444 deoD Staphylococcus pseudintermedius ED99 purine nucleoside phosphorylase YP_006014841.1 742300 R 984892 CDS YP_006014842.1 386318679 12610445 743226..744527 1 NC_017568.1 identified by match to protein family HMM PF00591, match to protein family HMM PF02885, match to protein family HMM PF07831, match to protein family HMM TIGR02644; pyrimidine-nucleoside phosphorylase 744527 pdp 12610445 pdp Staphylococcus pseudintermedius ED99 pyrimidine-nucleoside phosphorylase YP_006014842.1 743226 D 984892 CDS YP_006014843.1 386318680 12610446 744539..744892 1 NC_017568.1 hypothetical protein 744892 12610446 SPSE_0682 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014843.1 744539 D 984892 CDS YP_006014844.1 386318681 12610447 complement(744954..745424) 1 NC_017568.1 identified by match to protein family HMM PF02664; S-ribosylhomocysteinase 745424 luxS 12610447 luxS Staphylococcus pseudintermedius ED99 S-ribosylhomocysteinase YP_006014844.1 744954 R 984892 CDS YP_006014845.1 386318682 12610448 745927..747108 1 NC_017568.1 identified by match to protein family HMM PF01546, match to protein family HMM PF07687, match to protein family HMM TIGR01891; amidohydrolase family protein 747108 12610448 SPSE_0685 Staphylococcus pseudintermedius ED99 amidohydrolase family protein YP_006014845.1 745927 D 984892 CDS YP_006014846.1 386318683 12610449 747111..748301 1 NC_017568.1 hypothetical protein 748301 12610449 SPSE_0686 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014846.1 747111 D 984892 CDS YP_006014847.1 386318684 12610450 748418..749089 1 NC_017568.1 hypothetical protein 749089 12610450 SPSE_0687 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014847.1 748418 D 984892 CDS YP_006014848.1 386318685 12610451 749281..749433 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 749433 12610451 SPSE_0688 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014848.1 749281 D 984892 CDS YP_006014849.1 386318686 12610452 complement(749500..750297) 1 NC_017568.1 identified by match to protein family HMM PF03630, match to protein family HMM TIGR00555; pantothenate kinase 750297 coaA 12610452 coaA Staphylococcus pseudintermedius ED99 pantothenate kinase YP_006014849.1 749500 R 984892 CDS YP_006014850.1 386318687 12610453 750423..750587 1 NC_017568.1 hypothetical protein 750587 12610453 SPSE_0690 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014850.1 750423 D 984892 CDS YP_006014851.1 386318688 12610454 751506..752714 1 NC_017568.1 identified by match to protein family HMM PF02371; transposase for ISSps2 752714 12610454 SPSE_0691 Staphylococcus pseudintermedius ED99 transposase for ISSps2 YP_006014851.1 751506 D 984892 CDS YP_006014852.1 386318689 12610455 complement(752917..754509) 1 NC_017568.1 identified by match to protein family HMM PF02028, match to protein family HMM TIGR00842; glycine betaine transporter 754509 opuD2 12610455 opuD2 Staphylococcus pseudintermedius ED99 glycine betaine transporter YP_006014852.1 752917 R 984892 CDS YP_006014853.1 386318690 12610456 754680..755543 1 NC_017568.1 identified by match to protein family HMM PF00583; GNAT family acetyltransferase 755543 12610456 SPSE_0693 Staphylococcus pseudintermedius ED99 GNAT family acetyltransferase YP_006014853.1 754680 D 984892 CDS YP_006014854.1 386318691 12610457 755592..755705 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 755705 12610457 SPSE_0694 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014854.1 755592 D 984892 CDS YP_006014855.1 386318692 12610458 755812..756354 1 NC_017568.1 identified by match to protein family HMM PF05066; DNA-directed RNA polymerase subunit delta 756354 rpoE 12610458 rpoE Staphylococcus pseudintermedius ED99 DNA-directed RNA polymerase subunit delta YP_006014855.1 755812 D 984892 CDS YP_006014856.1 386318693 12610459 756765..758378 1 NC_017568.1 identified by match to protein family HMM PF00117, match to protein family HMM PF06418, match to protein family HMM TIGR00337; CTP synthase 758378 pyrG 12610459 pyrG Staphylococcus pseudintermedius ED99 CTP synthase YP_006014856.1 756765 D 984892 CDS YP_006014857.1 386318694 12610460 758821..760179 1 NC_017568.1 identified by match to protein family HMM PF07690, match to protein family HMM TIGR00712, match to protein family HMM TIGR00881; glycerol-3-phosphate transporter 760179 glpT 12610460 glpT Staphylococcus pseudintermedius ED99 glycerol-3-phosphate transporter YP_006014857.1 758821 D 984892 CDS YP_006014858.1 386318695 12610461 760308..760469 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 760469 12610461 SPSE_0698 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014858.1 760308 D 984892 CDS YP_006014859.1 386318696 12610462 complement(760604..761128) 1 NC_017568.1 hypothetical protein 761128 12610462 SPSE_0699 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014859.1 760604 R 984892 CDS YP_006014860.1 386318697 12610463 761393..762265 1 NC_017568.1 identified by match to protein family HMM PF01116, match to protein family HMM TIGR00167, match to protein family HMM TIGR01859; fructose-1,6-bisphosphate aldolase 762265 fba 12610463 fba Staphylococcus pseudintermedius ED99 fructose-1,6-bisphosphate aldolase YP_006014860.1 761393 D 984892 CDS YP_006014861.1 386318698 12610464 762610..763875 1 NC_017568.1 identified by match to protein family HMM PF00275, match to protein family HMM TIGR01072; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 763875 murA1 12610464 murA1 Staphylococcus pseudintermedius ED99 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_006014861.1 762610 D 984892 CDS YP_006014862.1 386318699 12610465 763923..764252 1 NC_017568.1 identified by match to protein family HMM PF01638; putative transcriptional regulator 764252 12610465 SPSE_0702 Staphylococcus pseudintermedius ED99 putative transcriptional regulator YP_006014862.1 763923 D 984892 CDS YP_006014863.1 386318700 12610466 764433..765866 1 NC_017568.1 identified by match to protein family HMM PF00171; aldehyde dehydrogenase 765866 12610466 SPSE_0703 Staphylococcus pseudintermedius ED99 aldehyde dehydrogenase YP_006014863.1 764433 D 984892 CDS YP_006014864.1 386318701 12610467 complement(765957..766097) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 766097 12610467 SPSE_0704 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014864.1 765957 R 984892 CDS YP_006014865.1 386318702 12610468 766739..768052 1 NC_017568.1 identified by match to protein family HMM PF00006, match to protein family HMM PF07497, match to protein family HMM PF07498, match to protein family HMM TIGR00767; transcription termination factor Rho 768052 rho 12610468 rho Staphylococcus pseudintermedius ED99 transcription termination factor Rho YP_006014865.1 766739 D 984892 CDS YP_006014866.1 386318703 12610469 768175..768429 1 NC_017568.1 identified by match to protein family HMM PF01197, match to protein family HMM TIGR00105; 50S ribosomal protein L31 768429 rpmE 12610469 rpmE Staphylococcus pseudintermedius ED99 50S ribosomal protein L31 YP_006014866.1 768175 D 984892 CDS YP_006014867.1 386318704 12610470 768777..769379 1 NC_017568.1 identified by match to protein family HMM PF00265; thymidine kinase 769379 tdk 12610470 tdk Staphylococcus pseudintermedius ED99 thymidine kinase YP_006014867.1 768777 D 984892 CDS YP_006014868.1 386318705 12610471 769379..770455 1 NC_017568.1 identified by match to protein family HMM PF00472, match to protein family HMM PF03462, match to protein family HMM TIGR00019; peptide chain release factor 1 770455 prfA 12610471 prfA Staphylococcus pseudintermedius ED99 peptide chain release factor 1 YP_006014868.1 769379 D 984892 CDS YP_006014869.1 386318706 12610472 770445..771287 1 NC_017568.1 identified by match to protein family HMM PF05175, match to protein family HMM TIGR00536, match to protein family HMM TIGR03534; methyltransferase, HemK family protein 771287 12610472 SPSE_0709 Staphylococcus pseudintermedius ED99 methyltransferase, HemK family protein YP_006014869.1 770445 D 984892 CDS YP_006014870.1 386318707 12610473 771453..772505 1 NC_017568.1 identified by match to protein family HMM PF01300, match to protein family HMM PF03481, match to protein family HMM TIGR00057; translation factor 772505 12610473 SPSE_0710 Staphylococcus pseudintermedius ED99 translation factor YP_006014870.1 771453 D 984892 CDS YP_006014871.1 386318708 12610474 772502..772927 1 NC_017568.1 identified by match to protein family HMM PF01451; low molecular weight protein-tyrosine-phosphatase PtpB 772927 ptpB 12610474 ptpB Staphylococcus pseudintermedius ED99 low molecular weight protein-tyrosine-phosphatase PtpB YP_006014871.1 772502 D 984892 CDS YP_006014872.1 386318709 12610475 773045..773572 1 NC_017568.1 identified by match to protein family HMM PF04260, match to protein family HMM TIGR01440; hypothetical protein 773572 12610475 SPSE_0712 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014872.1 773045 D 984892 CDS YP_006014873.1 386318710 12610476 773593..774831 1 NC_017568.1 identified by match to protein family HMM PF00464, match to protein family HMM PF01212, match to protein family HMM PF01276; serine hydroxymethyltransferase 774831 glyA 12610476 glyA Staphylococcus pseudintermedius ED99 serine hydroxymethyltransferase YP_006014873.1 773593 D 984892 CDS YP_006014874.1 386318711 12610477 774865..775494 1 NC_017568.1 identified by match to protein family HMM PF00156, match to protein family HMM TIGR01091; uracil phosphoribosyltransferase 775494 upp 12610477 upp Staphylococcus pseudintermedius ED99 uracil phosphoribosyltransferase YP_006014874.1 774865 D 984892 CDS YP_006014875.1 386318712 12610478 775517..776656 1 NC_017568.1 identified by match to protein family HMM PF02350, match to protein family HMM TIGR00236; UDP-N-acetylglucosamine 2-epimerase 776656 12610478 SPSE_0715 Staphylococcus pseudintermedius ED99 UDP-N-acetylglucosamine 2-epimerase YP_006014875.1 775517 D 984892 CDS YP_006014876.1 386318713 12610479 776825..777181 1 NC_017568.1 hypothetical protein 777181 12610479 SPSE_0716 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014876.1 776825 D 984892 CDS YP_006014877.1 386318714 12610480 777216..777938 1 NC_017568.1 identified by match to protein family HMM PF00119, match to protein family HMM TIGR01131; ATP synthase F0 subunit A 777938 atpB 12610480 atpB Staphylococcus pseudintermedius ED99 ATP synthase F0 subunit A YP_006014877.1 777216 D 984892 CDS YP_006014878.1 386318715 12610481 777981..778193 1 NC_017568.1 identified by match to protein family HMM PF00137, match to protein family HMM TIGR01260; ATP synthase F0 subunit C 778193 atpE 12610481 atpE Staphylococcus pseudintermedius ED99 ATP synthase F0 subunit C YP_006014878.1 777981 D 984892 CDS YP_006014879.1 386318716 12610482 778360..778878 1 NC_017568.1 identified by match to protein family HMM PF00430, match to protein family HMM TIGR01144; ATP synthase F0 subunit B 778878 atpF 12610482 atpF Staphylococcus pseudintermedius ED99 ATP synthase F0 subunit B YP_006014879.1 778360 D 984892 CDS YP_006014880.1 386318717 12610483 778878..779417 1 NC_017568.1 identified by match to protein family HMM PF00213, match to protein family HMM TIGR01145; ATP synthase F1 subunit delta 779417 atpH 12610483 atpH Staphylococcus pseudintermedius ED99 ATP synthase F1 subunit delta YP_006014880.1 778878 D 984892 CDS YP_006014881.1 386318718 12610484 779444..780955 1 NC_017568.1 identified by match to protein family HMM PF00006, match to protein family HMM PF00306, match to protein family HMM PF02874, match to protein family HMM PF09378, match to protein family HMM TIGR00962; ATP synthase F1 subunit alpha 780955 atpA 12610484 atpA Staphylococcus pseudintermedius ED99 ATP synthase F1 subunit alpha YP_006014881.1 779444 D 984892 CDS YP_006014882.1 386318719 12610485 780990..781859 1 NC_017568.1 identified by match to protein family HMM PF00231, match to protein family HMM TIGR01146; ATP synthase F1 subunit gamma 781859 atpG 12610485 atpG Staphylococcus pseudintermedius ED99 ATP synthase F1 subunit gamma YP_006014882.1 780990 D 984892 CDS YP_006014883.1 386318720 12610486 781884..783296 1 NC_017568.1 identified by match to protein family HMM PF00006, match to protein family HMM PF00306, match to protein family HMM PF02874, match to protein family HMM TIGR01039; ATP synthase F1 subunit beta 783296 atpD 12610486 atpD Staphylococcus pseudintermedius ED99 ATP synthase F1 subunit beta YP_006014883.1 781884 D 984892 CDS YP_006014884.1 386318721 12610487 783319..783723 1 NC_017568.1 identified by match to protein family HMM PF00401, match to protein family HMM PF02823, match to protein family HMM TIGR01216; ATP synthase F1 subunit epsilon 783723 atpC 12610487 atpC Staphylococcus pseudintermedius ED99 ATP synthase F1 subunit epsilon YP_006014884.1 783319 D 984892 CDS YP_006014885.1 386318722 12610488 784116..784346 1 NC_017568.1 identified by match to protein family HMM PF06612, match to protein family HMM TIGR02327; hypothetical protein 784346 12610488 SPSE_0725 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014885.1 784116 D 984892 CDS YP_006014886.1 386318723 12610489 784457..785722 1 NC_017568.1 identified by match to protein family HMM PF00275, match to protein family HMM TIGR01072; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 785722 murA2 12610489 murA2 Staphylococcus pseudintermedius ED99 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_006014886.1 784457 D 984892 CDS YP_006014887.1 386318724 12610490 785748..785912 1 NC_017568.1 hypothetical protein 785912 12610490 SPSE_0727 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014887.1 785748 D 984892 CDS YP_006014888.1 386318725 12610491 785912..786355 1 NC_017568.1 identified by match to protein family HMM PF07977, match to protein family HMM TIGR01750; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase 786355 fabZ 12610491 fabZ Staphylococcus pseudintermedius ED99 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase YP_006014888.1 785912 D 984892 CDS YP_006014889.1 386318726 12610492 complement(786471..786905) 1 NC_017568.1 hypothetical protein 786905 12610492 SPSE_0729 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014889.1 786471 R 984892 CDS YP_006014890.1 386318727 12610493 787086..787442 1 NC_017568.1 identified by match to protein family HMM PF00436; ssDNA-binding protein 787442 12610493 SPSE_0730 Staphylococcus pseudintermedius ED99 ssDNA-binding protein YP_006014890.1 787086 D 984892 CDS YP_006014891.1 386318728 12610494 788026..788709 1 NC_017568.1 identified by match to protein family HMM PF03070; putative thiaminase II 788709 tenA 12610494 tenA Staphylococcus pseudintermedius ED99 putative thiaminase II YP_006014891.1 788026 D 984892 CDS YP_006014892.1 386318729 12610495 788709..789515 1 NC_017568.1 identified by match to protein family HMM PF08543, match to protein family HMM TIGR00097; phosphomethylpyrimidine kinase 789515 thiD 12610495 thiD Staphylococcus pseudintermedius ED99 phosphomethylpyrimidine kinase YP_006014892.1 788709 D 984892 CDS YP_006014893.1 386318730 12610496 789517..790320 1 NC_017568.1 identified by match to protein family HMM PF02110; hydroxyethylthiazole kinase 790320 thiM 12610496 thiM Staphylococcus pseudintermedius ED99 hydroxyethylthiazole kinase YP_006014893.1 789517 D 984892 CDS YP_006014894.1 386318731 12610497 790310..790948 1 NC_017568.1 identified by match to protein family HMM PF02581, match to protein family HMM TIGR00693; thiamine-phosphate pyrophosphorylase 790948 thiE 12610497 thiE Staphylococcus pseudintermedius ED99 thiamine-phosphate pyrophosphorylase YP_006014894.1 790310 D 984892 CDS YP_006014895.1 386318732 12610498 791037..791903 1 NC_017568.1 identified by match to protein family HMM PF02096, match to protein family HMM TIGR03592; membrane protein OxaA 791903 oxaA 12610498 oxaA Staphylococcus pseudintermedius ED99 membrane protein OxaA YP_006014895.1 791037 D 984892 CDS YP_006014896.1 386318733 12610499 complement(791957..792613) 1 NC_017568.1 identified by match to protein family HMM PF01966; HD domain-containing protein 792613 12610499 SPSE_0737 Staphylococcus pseudintermedius ED99 HD domain-containing protein YP_006014896.1 791957 R 984892 CDS YP_006014897.1 386318734 12610500 complement(792634..794124) 1 NC_017568.1 identified by match to protein family HMM PF00614; cardiolipin synthetase 794124 cls2 12610500 cls2 Staphylococcus pseudintermedius ED99 cardiolipin synthetase YP_006014897.1 792634 R 984892 CDS YP_006014898.1 386318735 12610501 794256..794543 1 NC_017568.1 identified by match to protein family HMM PF02583; hypothetical protein 794543 12610501 SPSE_0739 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014898.1 794256 D 984892 CDS YP_006014899.1 386318736 12610502 794556..794777 1 NC_017568.1 hypothetical protein 794777 12610502 SPSE_0740 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014899.1 794556 D 984892 CDS YP_006014900.1 386318737 12610503 794781..794987 1 NC_017568.1 identified by match to protein family HMM PF00403; heavy-metal-associated protein 794987 12610503 SPSE_0741 Staphylococcus pseudintermedius ED99 heavy-metal-associated protein YP_006014900.1 794781 D 984892 CDS YP_006014901.1 386318738 12610504 795088..797268 1 NC_017568.1 identified by match to protein family HMM PF00122, match to protein family HMM PF00403, match to protein family HMM PF00702, match to protein family HMM PF08282, match to protein family HMM TIGR01494, match to protein family HMM TIGR01511, match to p; cation-transporting ATPase PacS 797268 12610504 SPSE_0742 Staphylococcus pseudintermedius ED99 cation-transporting ATPase PacS YP_006014901.1 795088 D 984892 CDS YP_006014902.1 386318739 12610505 797354..797500 1 NC_017568.1 hypothetical protein 797500 12610505 SPSE_0743 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014902.1 797354 D 984892 CDS YP_006014903.1 386318740 12610506 798467..799195 1 NC_017568.1 identified by Glimmer3, putative; LPXTG-motif cell wall anchor domain-containing protein 799195 spsB 12610506 spsB Staphylococcus pseudintermedius ED99 LPXTG-motif cell wall anchor domain-containing protein YP_006014903.1 798467 D 984892 CDS YP_006014904.1 386318741 12610507 complement(799245..800453) 1 NC_017568.1 identified by match to protein family HMM PF01098; FtsW/RodA/SpoVE family cell division protein 800453 ftsW 12610507 ftsW Staphylococcus pseudintermedius ED99 FtsW/RodA/SpoVE family cell division protein YP_006014904.1 799245 R 984892 CDS YP_006014905.1 386318742 12610508 800607..801677 1 NC_017568.1 identified by match to protein family HMM PF01820, match to protein family HMM PF02222, match to protein family HMM PF07478, match to protein family HMM TIGR01205; D-alanine--D-alanine ligase 801677 12610508 SPSE_0746 Staphylococcus pseudintermedius ED99 D-alanine--D-alanine ligase YP_006014905.1 800607 D 984892 CDS YP_006014906.1 386318743 12610509 801689..803053 1 NC_017568.1 identified by match to protein family HMM PF01225, match to protein family HMM PF02875, match to protein family HMM PF08245, match to protein family HMM TIGR01143; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 803053 murF 12610509 murF Staphylococcus pseudintermedius ED99 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase YP_006014906.1 801689 D 984892 CDS YP_006014907.1 386318744 12610510 803334..804821 1 NC_017568.1 identified by match to protein family HMM PF00270, match to protein family HMM PF00271; DEAD-box ATP dependent RNA helicase 804821 12610510 SPSE_0748 Staphylococcus pseudintermedius ED99 DEAD-box ATP dependent RNA helicase YP_006014907.1 803334 D 984892 CDS YP_006014908.1 386318745 12610511 805060..805533 1 NC_017568.1 identified by match to protein family HMM PF03703; hypothetical protein 805533 12610511 SPSE_0749 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014908.1 805060 D 984892 CDS YP_006014909.1 386318746 12610512 805526..807055 1 NC_017568.1 identified by match to protein family HMM PF03703; hypothetical protein 807055 12610512 SPSE_0750 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014909.1 805526 D 984892 CDS YP_006014910.1 386318747 12610513 807039..807557 1 NC_017568.1 identified by match to protein family HMM PF03703; hypothetical protein 807557 12610513 SPSE_0751 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014910.1 807039 D 984892 CDS YP_006014911.1 386318748 12610514 807554..807904 1 NC_017568.1 identified by match to protein family HMM PF01648, match to protein family HMM TIGR00516, match to protein family HMM TIGR00556; holo-[acyl-carrier-protein] synthase 807904 acpS 12610514 acpS Staphylococcus pseudintermedius ED99 holo-[acyl-carrier-protein] synthase YP_006014911.1 807554 D 984892 CDS YP_006014912.1 386318749 12610515 807938..809086 1 NC_017568.1 identified by match to protein family HMM PF00842, match to protein family HMM PF01168, match to protein family HMM TIGR00492; alanine racemase 1 809086 alrA 12610515 alrA Staphylococcus pseudintermedius ED99 alanine racemase 1 YP_006014912.1 807938 D 984892 CDS YP_006014913.1 386318750 12610516 809171..809341 1 NC_017568.1 antitoxin MazE 809341 mazE 12610516 mazE Staphylococcus pseudintermedius ED99 antitoxin MazE YP_006014913.1 809171 D 984892 CDS YP_006014914.1 386318751 12610517 809342..809695 1 NC_017568.1 identified by match to protein family HMM PF02452; toxin MazF 809695 mazF 12610517 mazF Staphylococcus pseudintermedius ED99 toxin MazF YP_006014914.1 809342 D 984892 CDS YP_006014915.1 386318752 12610518 809753..810757 1 NC_017568.1 identified by match to protein family HMM PF07228; serine phosphatase RsbU, regulator of sigma subunit 810757 rsbU 12610518 rsbU Staphylococcus pseudintermedius ED99 serine phosphatase RsbU, regulator of sigma subunit YP_006014915.1 809753 D 984892 CDS YP_006014916.1 386318753 12610519 810836..811162 1 NC_017568.1 identified by match to protein family HMM PF01740, match to protein family HMM TIGR00377; anti-sigma-B factor antagonist 811162 rsbV 12610519 rsbV Staphylococcus pseudintermedius ED99 anti-sigma-B factor antagonist YP_006014916.1 810836 D 984892 CDS YP_006014917.1 386318754 12610520 811159..811641 1 NC_017568.1 identified by match to protein family HMM PF02518, match to protein family HMM TIGR01924; anti-sigma B factor 811641 rsbW 12610520 rsbW Staphylococcus pseudintermedius ED99 anti-sigma B factor YP_006014917.1 811159 D 984892 CDS YP_006014918.1 386318755 12610521 811616..812386 1 NC_017568.1 identified by match to protein family HMM PF04539, match to protein family HMM PF04542, match to protein family HMM PF04545, match to protein family HMM PF08281, match to protein family HMM TIGR02937, match to protein family HMM TIGR02941, match to p; RNA polymerase sigma-B factor 812386 sigB 12610521 sigB Staphylococcus pseudintermedius ED99 RNA polymerase sigma-B factor YP_006014918.1 811616 D 984892 CDS YP_006014919.1 386318756 12610522 812664..814814 1 NC_017568.1 identified by match to protein family HMM PF00575, match to protein family HMM PF09371; S1 RNA binding domain-containing protein 814814 12610522 SPSE_0760 Staphylococcus pseudintermedius ED99 S1 RNA binding domain-containing protein YP_006014919.1 812664 D 984892 CDS YP_006014920.1 386318757 12610523 814807..815259 1 NC_017568.1 identified by match to protein family HMM PF03926; putative metallopeptidase SprT family 815259 12610523 SPSE_0761 Staphylococcus pseudintermedius ED99 putative metallopeptidase SprT family YP_006014920.1 814807 D 984892 CDS YP_006014921.1 386318758 12610529 821372..822556 1 NC_017568.1 identified by match to protein family HMM PF07690; major facilitator family transporter 822556 12610529 SPSE_0767 Staphylococcus pseudintermedius ED99 major facilitator family transporter YP_006014921.1 821372 D 984892 CDS YP_006014922.1 386318759 12610530 complement(822626..823894) 1 NC_017568.1 identified by match to protein family HMM PF00291, match to protein family HMM PF00585, match to protein family HMM TIGR02079; threonine dehydratase 823894 ilvA-2 12610530 ilvA-2 Staphylococcus pseudintermedius ED99 threonine dehydratase YP_006014922.1 822626 R 984892 CDS YP_006014923.1 386318760 12610531 complement(823907..824479) 1 NC_017568.1 identified by match to protein family HMM PF00694, match to protein family HMM TIGR00171; 3-isopropylmalate dehydratase small subunit 824479 leuD 12610531 leuD Staphylococcus pseudintermedius ED99 3-isopropylmalate dehydratase small subunit YP_006014923.1 823907 R 984892 CDS YP_006014924.1 386318761 12610532 complement(824479..825852) 1 NC_017568.1 identified by match to protein family HMM PF00330, match to protein family HMM TIGR00170; 3-isopropylmalate dehydratase large subunit 825852 leuC 12610532 leuC Staphylococcus pseudintermedius ED99 3-isopropylmalate dehydratase large subunit YP_006014924.1 824479 R 984892 CDS YP_006014925.1 386318762 12610533 complement(825856..826905) 1 NC_017568.1 identified by match to protein family HMM PF00180, match to protein family HMM TIGR00169; 3-isopropylmalate dehydrogenase 826905 leuB 12610533 leuB Staphylococcus pseudintermedius ED99 3-isopropylmalate dehydrogenase YP_006014925.1 825856 R 984892 CDS YP_006014926.1 386318763 12610534 complement(826902..828434) 1 NC_017568.1 identified by match to protein family HMM PF00682, match to protein family HMM PF08502, match to protein family HMM TIGR00973; 2-isopropylmalate synthase 828434 leuA 12610534 leuA Staphylococcus pseudintermedius ED99 2-isopropylmalate synthase YP_006014926.1 826902 R 984892 CDS YP_006014927.1 386318764 12610535 complement(828456..829460) 1 NC_017568.1 identified by match to protein family HMM PF01450, match to protein family HMM PF02629, match to protein family HMM PF03446, match to protein family HMM PF07991, match to protein family HMM TIGR00465; ketol-acid reductoisomerase 829460 ilvC 12610535 ilvC Staphylococcus pseudintermedius ED99 ketol-acid reductoisomerase YP_006014927.1 828456 R 984892 CDS YP_006014928.1 386318765 12610536 complement(829494..829967) 1 NC_017568.1 identified by match to protein family HMM PF01842, match to protein family HMM TIGR00119; acetolactate synthase small subunit 829967 ilvN 12610536 ilvN Staphylococcus pseudintermedius ED99 acetolactate synthase small subunit YP_006014928.1 829494 R 984892 CDS YP_006014929.1 386318766 12610537 complement(829964..831718) 1 NC_017568.1 identified by match to protein family HMM PF00205, match to protein family HMM PF02775, match to protein family HMM PF02776, match to protein family HMM TIGR00118; acetolactate synthase large subunit 831718 ilvB 12610537 ilvB Staphylococcus pseudintermedius ED99 acetolactate synthase large subunit YP_006014929.1 829964 R 984892 CDS YP_006014930.1 386318767 12610538 complement(831739..833427) 1 NC_017568.1 identified by match to protein family HMM PF00920, match to protein family HMM TIGR00110; dihydroxy-acid dehydratase 833427 ilvD 12610538 ilvD Staphylococcus pseudintermedius ED99 dihydroxy-acid dehydratase YP_006014930.1 831739 R 984892 CDS YP_006014931.1 386318768 12610539 833971..834429 1 NC_017568.1 identified by match to protein family HMM PF02367, match to protein family HMM TIGR00150; hypothetical protein 834429 12610539 SPSE_0777 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014931.1 833971 D 984892 CDS YP_006014932.1 386318769 12610540 834410..835066 1 NC_017568.1 identified by match to protein family HMM PF00814; putative glycoprotease 835066 12610540 SPSE_0778 Staphylococcus pseudintermedius ED99 putative glycoprotease YP_006014932.1 834410 D 984892 CDS YP_006014933.1 386318770 12610541 835045..835515 1 NC_017568.1 identified by match to protein family HMM PF00583, match to protein family HMM TIGR01575; ribosomal-protein-alanine acetyltransferase 835515 rimI 12610541 rimI Staphylococcus pseudintermedius ED99 ribosomal-protein-alanine acetyltransferase YP_006014933.1 835045 D 984892 CDS YP_006014934.1 386318771 12610542 835508..836530 1 NC_017568.1 identified by match to protein family HMM PF00814, match to protein family HMM TIGR00329; O-sialoglycoprotein endopeptidase 836530 gcp 12610542 gcp Staphylococcus pseudintermedius ED99 O-sialoglycoprotein endopeptidase YP_006014934.1 835508 D 984892 CDS YP_006014935.1 386318772 12610543 complement(836765..837001) 1 NC_017568.1 transposase for ISSps2, truncated 837001 12610543 SPSE_0781 Staphylococcus pseudintermedius ED99 transposase for ISSps2, truncated YP_006014935.1 836765 R 984892 CDS YP_006014936.1 386318773 12610544 complement(837511..839094) 1 NC_017568.1 identified by match to protein family HMM PF00488; DNA mismatch repair protein, MutS family 839094 12610544 SPSE_0782 Staphylococcus pseudintermedius ED99 DNA mismatch repair protein, MutS family YP_006014936.1 837511 R 984892 CDS YP_006014937.1 386318774 12610545 complement(839457..841409) 1 NC_017568.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 841409 12610545 SPSE_0783 Staphylococcus pseudintermedius ED99 ABC transporter ATP-binding protein YP_006014937.1 839457 R 984892 CDS YP_006014938.1 386318775 12610546 841563..842210 1 NC_017568.1 identified by match to protein family HMM PF02629, match to protein family HMM PF06971; redox-sensing transcriptional repressor Rex 842210 rex 12610546 rex Staphylococcus pseudintermedius ED99 redox-sensing transcriptional repressor Rex YP_006014938.1 841563 D 984892 CDS YP_006014939.1 386318776 12610547 complement(842376..843560) 1 NC_017568.1 identified by match to protein family HMM PF07690; multidrug-efflux transporter 843560 12610547 SPSE_0785 Staphylococcus pseudintermedius ED99 multidrug-efflux transporter YP_006014939.1 842376 R 984892 CDS YP_006014940.1 386318777 12610548 complement(843541..844020) 1 NC_017568.1 identified by match to protein family HMM PF01047; MarR family transcriptional regulator 844020 12610548 SPSE_0786 Staphylococcus pseudintermedius ED99 MarR family transcriptional regulator YP_006014940.1 843541 R 984892 CDS YP_006014941.1 386318778 12610549 844175..844846 1 NC_017568.1 hypothetical protein 844846 12610549 SPSE_0787 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014941.1 844175 D 984892 CDS YP_006014942.1 386318779 12610550 844861..846060 1 NC_017568.1 identified by match to protein family HMM PF00067; cytochrome P450 protein 846060 cypX 12610550 cypX Staphylococcus pseudintermedius ED99 cytochrome P450 protein YP_006014942.1 844861 D 984892 CDS YP_006014943.1 386318780 12610551 847054..848001 1 NC_017568.1 identified by match to protein family HMM PF00356, match to protein family HMM PF00532; sucrose operon repressor 848001 scrR 12610551 scrR Staphylococcus pseudintermedius ED99 sucrose operon repressor YP_006014943.1 847054 D 984892 CDS YP_006014944.1 386318781 12610552 848057..849541 1 NC_017568.1 identified by match to protein family HMM PF00251, match to protein family HMM PF08244, match to protein family HMM TIGR01322; sucrose-6-phosphate hydrolase 849541 cscA 12610552 cscA Staphylococcus pseudintermedius ED99 sucrose-6-phosphate hydrolase YP_006014944.1 848057 D 984892 CDS YP_006014945.1 386318782 12610553 849545..850489 1 NC_017568.1 identified by match to protein family HMM PF00294; putative fructokinase 850489 12610553 SPSE_0791 Staphylococcus pseudintermedius ED99 putative fructokinase YP_006014945.1 849545 D 984892 CDS YP_006014946.1 386318783 12610554 complement(850549..851265) 1 NC_017568.1 identified by match to protein family HMM PF00072, match to protein family HMM PF04397; accessory gene regulator protein A 851265 agrA 12610554 agrA Staphylococcus pseudintermedius ED99 accessory gene regulator protein A YP_006014946.1 850549 R 984892 CDS YP_006014947.1 386318784 12610555 complement(851279..852571) 1 NC_017568.1 identified by match to protein family HMM PF02518; accessory gene regulator protein C 852571 agrC 12610555 agrC Staphylococcus pseudintermedius ED99 accessory gene regulator protein C YP_006014947.1 851279 R 984892 CDS YP_006014948.1 386318785 12610556 complement(852595..852732) 1 NC_017568.1 identified by match to protein family HMM PF05931; accessory gene regulator protein D 852732 agrD 12610556 agrD Staphylococcus pseudintermedius ED99 accessory gene regulator protein D YP_006014948.1 852595 R 984892 CDS YP_006014949.1 386318786 12610557 complement(852734..853300) 1 NC_017568.1 identified by match to protein family HMM PF04647; accessory gene regulator protein B 853300 agrB 12610557 agrB Staphylococcus pseudintermedius ED99 accessory gene regulator protein B YP_006014949.1 852734 R 984892 CDS YP_006014950.1 386318787 12610558 complement(853349..853462) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 853462 12610558 SPSE_0796 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014950.1 853349 R 984892 CDS YP_006014951.1 386318788 12610559 complement(854057..854860) 1 NC_017568.1 identified by match to protein family HMM PF00795; hydrolase 854860 12610559 SPSE_0797 Staphylococcus pseudintermedius ED99 hydrolase YP_006014951.1 854057 R 984892 CDS YP_006014952.1 386318789 12610560 855025..856386 1 NC_017568.1 membrane anchored protein 856386 spsH 12610560 spsH Staphylococcus pseudintermedius ED99 membrane anchored protein YP_006014952.1 855025 D 984892 CDS YP_006014953.1 386318790 12610561 complement(856498..857265) 1 NC_017568.1 identified by match to protein family HMM PF02517; metal-dependent membrane protease 857265 12610561 SPSE_0799 Staphylococcus pseudintermedius ED99 metal-dependent membrane protease YP_006014953.1 856498 R 984892 CDS YP_006014954.1 386318791 12610562 857435..857722 1 NC_017568.1 identified by match to protein family HMM PF00166; chaperonin GroES 857722 groES 12610562 groES Staphylococcus pseudintermedius ED99 chaperonin GroES YP_006014954.1 857435 D 984892 CDS YP_006014955.1 386318792 12610563 857771..859390 1 NC_017568.1 identified by match to protein family HMM PF00118, match to protein family HMM TIGR02348; chaperonin GroEL 859390 groEL 12610563 groEL Staphylococcus pseudintermedius ED99 chaperonin GroEL YP_006014955.1 857771 D 984892 CDS YP_006014956.1 386318793 12610564 859800..860222 1 NC_017568.1 identified by match to protein family HMM PF00583; GNAT family acetyltransferase 860222 12610564 SPSE_0802 Staphylococcus pseudintermedius ED99 GNAT family acetyltransferase YP_006014956.1 859800 D 984892 CDS YP_006014957.1 386318794 12610565 complement(860401..861633) 1 NC_017568.1 identified by match to protein family HMM PF01546, match to protein family HMM PF07687, match to protein family HMM TIGR01910; acetylornithine deacetylase 861633 12610565 SPSE_0803 Staphylococcus pseudintermedius ED99 acetylornithine deacetylase YP_006014957.1 860401 R 984892 CDS YP_006014958.1 386318795 12610566 complement(861614..862135) 1 NC_017568.1 identified by match to protein family HMM PF01035, match to protein family HMM TIGR00589; methylated-DNA--protein-cysteine methyltransferase 862135 12610566 SPSE_0804 Staphylococcus pseudintermedius ED99 methylated-DNA--protein-cysteine methyltransferase YP_006014958.1 861614 R 984892 CDS YP_006014959.1 386318796 12610567 complement(862151..862975) 1 NC_017568.1 identified by match to protein family HMM PF04055; radical SAM domain-containing protein 862975 12610567 SPSE_0805 Staphylococcus pseudintermedius ED99 radical SAM domain-containing protein YP_006014959.1 862151 R 984892 CDS YP_006014960.1 386318797 12610568 complement(863032..864351) 1 NC_017568.1 identified by match to protein family HMM PF01610; transposase for ISSps1 864351 12610568 SPSE_0806 Staphylococcus pseudintermedius ED99 transposase for ISSps1 YP_006014960.1 863032 R 984892 CDS YP_006014961.1 386318798 12610569 complement(864526..865815) 1 NC_017568.1 identified by match to protein family HMM PF00155; aspartate aminotransferase 865815 12610569 SPSE_0807 Staphylococcus pseudintermedius ED99 aspartate aminotransferase YP_006014961.1 864526 R 984892 CDS YP_006014962.1 386318799 12610570 866419..866592 1 NC_017568.1 hypothetical protein 866592 12610570 SPSE_0808 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014962.1 866419 D 984892 CDS YP_006014963.1 386318800 12610571 867036..867911 1 NC_017568.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 867911 12610571 SPSE_0809 Staphylococcus pseudintermedius ED99 ABC transporter ATP-binding protein YP_006014963.1 867036 D 984892 CDS YP_006014964.1 386318801 12610572 867908..868636 1 NC_017568.1 hypothetical protein 868636 12610572 SPSE_0810 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014964.1 867908 D 984892 CDS YP_006014965.1 386318802 12610573 869054..869731 1 NC_017568.1 identified by match to protein family HMM PF00392; gluconate operon transcriptional repressor 869731 gntR 12610573 gntR Staphylococcus pseudintermedius ED99 gluconate operon transcriptional repressor YP_006014965.1 869054 D 984892 CDS YP_006014966.1 386318803 12610574 869755..871305 1 NC_017568.1 identified by match to protein family HMM PF00370, match to protein family HMM PF02782, match to protein family HMM TIGR01314; gluconate kinase 871305 gntK 12610574 gntK Staphylococcus pseudintermedius ED99 gluconate kinase YP_006014966.1 869755 D 984892 CDS YP_006014967.1 386318804 12610575 871316..872677 1 NC_017568.1 identified by match to protein family HMM PF02447, match to protein family HMM PF03600, match to protein family HMM TIGR00791; gluconate permease 872677 gntP 12610575 gntP Staphylococcus pseudintermedius ED99 gluconate permease YP_006014967.1 871316 D 984892 CDS YP_006014968.1 386318805 12610576 complement(872765..873322) 1 NC_017568.1 hypothetical protein 873322 12610576 SPSE_0814 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014968.1 872765 R 984892 CDS YP_006014969.1 386318806 12610577 873502..874065 1 NC_017568.1 identified by match to protein family HMM PF08006; hypothetical protein 874065 12610577 SPSE_0815 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014969.1 873502 D 984892 CDS YP_006014970.1 386318807 12610578 874062..874904 1 NC_017568.1 hypothetical protein 874904 12610578 SPSE_0816 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014970.1 874062 D 984892 CDS YP_006014971.1 386318808 12610579 875462..876748 1 NC_017568.1 identified by match to protein family HMM PF00078, match to protein family HMM PF08388; RNA-directed DNA polymerase 876748 12610579 SPSE_0817 Staphylococcus pseudintermedius ED99 RNA-directed DNA polymerase YP_006014971.1 875462 D 984892 CDS YP_006014972.1 386318809 12610580 complement(876873..877916) 1 NC_017568.1 identified by match to protein family HMM PF03417; acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase 877916 12610580 SPSE_0818 Staphylococcus pseudintermedius ED99 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase YP_006014972.1 876873 R 984892 CDS YP_006014973.1 386318810 12610581 complement(878629..879018) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 879018 12610581 SPSE_0819 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014973.1 878629 R 984892 CDS YP_006014974.1 386318811 12610582 879185..879358 1 NC_017568.1 hypothetical protein 879358 12610582 SPSE_0820 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014974.1 879185 D 984892 CDS YP_006014975.1 386318812 12610583 879577..880626 1 NC_017568.1 6-phosphogluconolactonase 880626 12610583 SPSE_0821 Staphylococcus pseudintermedius ED99 6-phosphogluconolactonase YP_006014975.1 879577 D 984892 CDS YP_006014976.1 386318813 12610584 complement(880733..882112) 1 NC_017568.1 identified by match to protein family HMM PF00171; aldehyde dehydrogenase 882112 aldA2 12610584 aldA2 Staphylococcus pseudintermedius ED99 aldehyde dehydrogenase YP_006014976.1 880733 R 984892 CDS YP_006014977.1 386318814 12610585 complement(882382..882663) 1 NC_017568.1 GNAT family acetyltransferase 882663 12610585 SPSE_0823 Staphylococcus pseudintermedius ED99 GNAT family acetyltransferase YP_006014977.1 882382 R 984892 CDS YP_006014978.1 386318815 12610586 complement(882693..883616) 1 NC_017568.1 identified by match to protein family HMM PF01368, match to protein family HMM PF02833; manganese-dependent inorganic pyrophosphatase 883616 ppaC 12610586 ppaC Staphylococcus pseudintermedius ED99 manganese-dependent inorganic pyrophosphatase YP_006014978.1 882693 R 984892 CDS YP_006014979.1 386318816 12610587 complement(883677..884228) 1 NC_017568.1 identified by match to protein family HMM PF00857; isochorismatase family protein 884228 12610587 SPSE_0825 Staphylococcus pseudintermedius ED99 isochorismatase family protein YP_006014979.1 883677 R 984892 CDS YP_006014980.1 386318817 12610588 884309..885415 1 NC_017568.1 hypothetical protein 885415 12610588 SPSE_0826 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014980.1 884309 D 984892 CDS YP_006014981.1 386318818 12610589 complement(885468..886271) 1 NC_017568.1 identified by match to protein family HMM PF00800, match to protein family HMM PF01842; prephenate dehydratase 886271 pheA 12610589 pheA Staphylococcus pseudintermedius ED99 prephenate dehydratase YP_006014981.1 885468 R 984892 CDS YP_006014982.1 386318819 12610590 complement(886315..887394) 1 NC_017568.1 identified by match to protein family HMM PF02898; nitric oxide synthase oxygenase 887394 nos 12610590 nos Staphylococcus pseudintermedius ED99 nitric oxide synthase oxygenase YP_006014982.1 886315 R 984892 CDS YP_006014983.1 386318820 12610591 888016..889491 1 NC_017568.1 identified by match to protein family HMM PF04095, match to protein family HMM TIGR01513; nicotinate phosphoribosyltransferase 889491 pncB 12610591 pncB Staphylococcus pseudintermedius ED99 nicotinate phosphoribosyltransferase YP_006014983.1 888016 D 984892 CDS YP_006014984.1 386318821 12610592 889478..890314 1 NC_017568.1 identified by match to protein family HMM PF02540, match to protein family HMM TIGR00552; NAD+ synthetase 890314 nadE 12610592 nadE Staphylococcus pseudintermedius ED99 NAD+ synthetase YP_006014984.1 889478 D 984892 CDS YP_006014985.1 386318822 12610593 890376..890945 1 NC_017568.1 hypothetical protein 890945 12610593 SPSE_0831 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014985.1 890376 D 984892 CDS YP_006014986.1 386318823 12610594 890935..891123 1 NC_017568.1 hypothetical protein 891123 12610594 SPSE_0832 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014986.1 890935 D 984892 CDS YP_006014987.1 386318824 12610595 891545..892840 1 NC_017568.1 identified by match to protein family HMM PF00206, match to protein family HMM TIGR00928; adenylosuccinate lyase 892840 purB 12610595 purB Staphylococcus pseudintermedius ED99 adenylosuccinate lyase YP_006014987.1 891545 D 984892 CDS YP_006014988.1 386318825 12610596 892908..893210 1 NC_017568.1 identified by match to protein family HMM PF01371, match to protein family HMM TIGR02531; hypothetical protein 893210 12610596 SPSE_0834 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014988.1 892908 D 984892 CDS YP_006014989.1 386318826 12610597 893229..893429 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 893429 12610597 SPSE_0835 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014989.1 893229 D 984892 CDS YP_006014990.1 386318827 12610598 894113..894802 1 NC_017568.1 identified by match to protein family HMM PF01884, match to protein family HMM TIGR01768; glycerol-1-phosphate prenyltransferase 894802 pcrB 12610598 pcrB Staphylococcus pseudintermedius ED99 glycerol-1-phosphate prenyltransferase YP_006014990.1 894113 D 984892 CDS YP_006014991.1 386318828 12610599 894802..896997 1 NC_017568.1 identified by match to protein family HMM PF00580, match to protein family HMM TIGR01073; ATP-dependent DNA helicase PcrA 896997 pcrA 12610599 pcrA Staphylococcus pseudintermedius ED99 ATP-dependent DNA helicase PcrA YP_006014991.1 894802 D 984892 CDS YP_006014992.1 386318829 12610600 897001..899004 1 NC_017568.1 identified by match to protein family HMM PF00533, match to protein family HMM PF01653, match to protein family HMM PF03119, match to protein family HMM PF03120, match to protein family HMM TIGR00575; NAD-dependent DNA ligase 899004 ligA 12610600 ligA Staphylococcus pseudintermedius ED99 NAD-dependent DNA ligase YP_006014992.1 897001 D 984892 CDS YP_006014993.1 386318830 12610601 899016..900221 1 NC_017568.1 identified by match to protein family HMM PF07537; pheromone lipoprotein CamS 900221 camS 12610601 camS Staphylococcus pseudintermedius ED99 pheromone lipoprotein CamS YP_006014993.1 899016 D 984892 CDS YP_006014994.1 386318831 12610602 complement(900610..902163) 1 NC_017568.1 identified by match to protein family HMM PF00474, match to protein family HMM TIGR00813, match to protein family HMM TIGR02121; high affinity proline permease 902163 putP 12610602 putP Staphylococcus pseudintermedius ED99 high affinity proline permease YP_006014994.1 900610 R 984892 CDS YP_006014995.1 386318832 12610603 902518..902820 1 NC_017568.1 identified by match to protein family HMM PF02686, match to protein family HMM TIGR00135; glutamyl-tRNA(Gln) amidotransferase subunit C 902820 gatC 12610603 gatC Staphylococcus pseudintermedius ED99 glutamyl-tRNA(Gln) amidotransferase subunit C YP_006014995.1 902518 D 984892 CDS YP_006014996.1 386318833 12610604 902823..904283 1 NC_017568.1 identified by match to protein family HMM PF01425, match to protein family HMM TIGR00132; glutamyl-tRNA (Gln) amidotransferase subunit A 904283 gatA 12610604 gatA Staphylococcus pseudintermedius ED99 glutamyl-tRNA (Gln) amidotransferase subunit A YP_006014996.1 902823 D 984892 CDS YP_006014997.1 386318834 12610605 904297..905724 1 NC_017568.1 identified by match to protein family HMM PF01162, match to protein family HMM PF02637, match to protein family HMM PF02934, match to protein family HMM TIGR00133; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B 905724 gatB 12610605 gatB Staphylococcus pseudintermedius ED99 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B YP_006014997.1 904297 D 984892 CDS YP_006014998.1 386318835 12610606 906402..907334 1 NC_017568.1 identified by match to protein family HMM PF00781, match to protein family HMM TIGR00147; hypothetical protein 907334 12610606 SPSE_0844 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006014998.1 906402 D 984892 CDS YP_006014999.1 386318836 12610607 907506..908870 1 NC_017568.1 identified by match to protein family HMM PF01938, match to protein family HMM PF05958, match to protein family HMM TIGR00479; TrmA family RNA methyltransferase 908870 12610607 SPSE_0845 Staphylococcus pseudintermedius ED99 TrmA family RNA methyltransferase YP_006014999.1 907506 D 984892 CDS YP_006015000.1 386318837 12610608 909185..909934 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 909934 12610608 SPSE_0846 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015000.1 909185 D 984892 CDS YP_006015001.1 386318838 12610609 909987..911030 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 911030 12610609 SPSE_0847 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015001.1 909987 D 984892 CDS YP_006015002.1 386318839 12610610 911041..912231 1 NC_017568.1 identified by match to protein family HMM PF07690; major facilitator family transporter 912231 12610610 SPSE_0848 Staphylococcus pseudintermedius ED99 major facilitator family transporter YP_006015002.1 911041 D 984892 CDS YP_006015003.1 386318840 12610611 912209..913612 1 NC_017568.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 913612 12610611 SPSE_0849 Staphylococcus pseudintermedius ED99 ABC transporter ATP-binding protein YP_006015003.1 912209 D 984892 CDS YP_006015004.1 386318841 12610612 914148..914375 1 NC_017568.1 putative RNA methyltransferase, truncated 914375 12610612 SPSE_0850 Staphylococcus pseudintermedius ED99 putative RNA methyltransferase, truncated YP_006015004.1 914148 D 984892 CDS YP_006015005.1 386318842 12610614 915806..915931 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 915931 12610614 SPSE_0853 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015005.1 915806 D 984892 CDS YP_006015006.1 386318843 12610615 915949..917340 1 NC_017568.1 identified by match to protein family HMM PF04055; radical SAM domain-containing protein 917340 12610615 SPSE_0854 Staphylococcus pseudintermedius ED99 radical SAM domain-containing protein YP_006015006.1 915949 D 984892 CDS YP_006015007.1 386318844 12610616 917333..918511 1 NC_017568.1 hypothetical protein 918511 12610616 SPSE_0855 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015007.1 917333 D 984892 CDS YP_006015008.1 386318845 12610617 918901..919443 1 NC_017568.1 hypothetical protein 919443 12610617 SPSE_0856 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015008.1 918901 D 984892 CDS YP_006015009.1 386318846 12610618 919548..920618 1 NC_017568.1 identified by match to protein family HMM PF00817; DNA-directed DNA polymerase IV 920618 dinB 12610618 dinB Staphylococcus pseudintermedius ED99 DNA-directed DNA polymerase IV YP_006015009.1 919548 D 984892 CDS YP_006015010.1 386318847 12610619 complement(920613..921173) 1 NC_017568.1 identified by match to protein family HMM PF00929; hypothetical protein 921173 12610619 SPSE_0858 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015010.1 920613 R 984892 CDS YP_006015011.1 386318848 12610620 complement(921462..921965) 1 NC_017568.1 identified by match to protein family HMM PF00210; ferritin 921965 ftnA 12610620 ftnA Staphylococcus pseudintermedius ED99 ferritin YP_006015011.1 921462 R 984892 CDS YP_006015012.1 386318849 12610621 922162..923472 1 NC_017568.1 identified by match to protein family HMM PF08245, match to protein family HMM PF08353; UDP-N-acetylmuramyl tripeptide synthase 923472 12610621 SPSE_0861 Staphylococcus pseudintermedius ED99 UDP-N-acetylmuramyl tripeptide synthase YP_006015012.1 922162 D 984892 CDS YP_006015013.1 386318850 12610622 923474..924196 1 NC_017568.1 identified by match to protein family HMM PF07685; cobyric acid synthase 924196 12610622 SPSE_0862 Staphylococcus pseudintermedius ED99 cobyric acid synthase YP_006015013.1 923474 D 984892 CDS YP_006015014.1 386318851 12610623 complement(925164..926162) 1 NC_017568.1 hypothetical protein 926162 12610623 SPSE_0863 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015014.1 925164 R 984892 CDS YP_006015015.1 386318852 12610624 926259..927020 1 NC_017568.1 identified by match to protein family HMM PF00557, match to protein family HMM TIGR00500; methionine aminopeptidase 927020 map 12610624 map Staphylococcus pseudintermedius ED99 methionine aminopeptidase YP_006015015.1 926259 D 984892 CDS YP_006015016.1 386318853 12610625 927118..927507 1 NC_017568.1 hypothetical protein 927507 12610625 SPSE_0865 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015016.1 927118 D 984892 CDS YP_006015017.1 386318854 12610626 927520..928221 1 NC_017568.1 hypothetical protein 928221 12610626 SPSE_0866 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015017.1 927520 D 984892 CDS YP_006015018.1 386318855 12610627 928218..929261 1 NC_017568.1 identified by match to protein family HMM PF02518, match to protein family HMM PF07730; signal transduction histidine kinase VraS 929261 vraS 12610627 vraS Staphylococcus pseudintermedius ED99 signal transduction histidine kinase VraS YP_006015018.1 928218 D 984892 CDS YP_006015019.1 386318856 12610628 929251..929880 1 NC_017568.1 identified by match to protein family HMM PF00072, match to protein family HMM PF00196, match to protein family HMM PF08281; two-component response regulator VraR 929880 vraR 12610628 vraR Staphylococcus pseudintermedius ED99 two-component response regulator VraR YP_006015019.1 929251 D 984892 CDS YP_006015020.1 386318857 12610629 complement(930447..931028) 1 NC_017568.1 identified by match to protein family HMM PF00484; carbonic anhydrase 931028 12610629 SPSE_0869 Staphylococcus pseudintermedius ED99 carbonic anhydrase YP_006015020.1 930447 R 984892 CDS YP_006015021.1 386318858 12610630 complement(931061..932398) 1 NC_017568.1 identified by match to protein family HMM PF03631, match to protein family HMM TIGR00765; ribonuclease BN-like family protein 932398 12610630 SPSE_0870 Staphylococcus pseudintermedius ED99 ribonuclease BN-like family protein YP_006015021.1 931061 R 984892 CDS YP_006015022.1 386318859 12610631 complement(932614..932901) 1 NC_017568.1 hypothetical protein 932901 12610631 SPSE_0871 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015022.1 932614 R 984892 CDS YP_006015023.1 386318860 12610632 complement(932909..933367) 1 NC_017568.1 identified by match to protein family HMM PF01451; low molecular weight protein-tyrosine-phosphatase PtpA 933367 ptpA 12610632 ptpA Staphylococcus pseudintermedius ED99 low molecular weight protein-tyrosine-phosphatase PtpA YP_006015023.1 932909 R 984892 CDS YP_006015024.1 386318861 12610633 933501..933704 1 NC_017568.1 identified by match to protein family HMM PF06569; hypothetical protein 933704 12610633 SPSE_0873 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015024.1 933501 D 984892 CDS YP_006015025.1 386318862 12610634 933726..934958 1 NC_017568.1 identified by match to protein family HMM PF02073; aminopeptidase Peps 934958 pepS 12610634 pepS Staphylococcus pseudintermedius ED99 aminopeptidase Peps YP_006015025.1 933726 D 984892 CDS YP_006015026.1 386318863 12610635 934977..935498 1 NC_017568.1 identified by match to protein family HMM PF03061; cytosolic long-chain acyl-CoA thioester hydrolase family protein 935498 12610635 SPSE_0875 Staphylococcus pseudintermedius ED99 cytosolic long-chain acyl-CoA thioester hydrolase family protein YP_006015026.1 934977 D 984892 CDS YP_006015027.1 386318864 12610636 complement(935564..936703) 1 NC_017568.1 identified by match to protein family HMM PF04055, match to protein family HMM PF08756; radical SAM domain-containing protein 936703 12610636 SPSE_0876 Staphylococcus pseudintermedius ED99 radical SAM domain-containing protein YP_006015027.1 935564 R 984892 CDS YP_006015028.1 386318865 12610637 936819..936977 1 NC_017568.1 hypothetical protein 936977 12610637 SPSE_0877 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015028.1 936819 D 984892 CDS YP_006015029.1 386318866 12610638 937059..937571 1 NC_017568.1 identified by match to protein family HMM PF01965, match to protein family HMM TIGR01382; Pfpi family intracellular protease 937571 12610638 SPSE_0878 Staphylococcus pseudintermedius ED99 Pfpi family intracellular protease YP_006015029.1 937059 D 984892 CDS YP_006015030.1 386318867 12610639 complement(938147..939892) 1 NC_017568.1 identified by match to protein family HMM PF00205, match to protein family HMM PF02775, match to protein family HMM PF02776; pyruvate oxidase 939892 12610639 SPSE_0879 Staphylococcus pseudintermedius ED99 pyruvate oxidase YP_006015030.1 938147 R 984892 CDS YP_006015031.1 386318868 12610640 940093..940890 1 NC_017568.1 identified by match to protein family HMM PF00912; putative transglycosylase 940890 12610640 SPSE_0880 Staphylococcus pseudintermedius ED99 putative transglycosylase YP_006015031.1 940093 D 984892 CDS YP_006015032.1 386318869 12610641 940921..941070 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 941070 12610641 SPSE_0881 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015032.1 940921 D 984892 CDS YP_006015033.1 386318870 12610642 941075..941878 1 NC_017568.1 identified by match to protein family HMM PF02631; regulatory protein RecX 941878 recX 12610642 recX Staphylococcus pseudintermedius ED99 regulatory protein RecX YP_006015033.1 941075 D 984892 CDS YP_006015034.1 386318871 12610643 941871..942185 1 NC_017568.1 identified by match to protein family HMM PF08838; hypothetical protein 942185 12610643 SPSE_0883 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015034.1 941871 D 984892 CDS YP_006015035.1 386318872 12610644 942201..943730 1 NC_017568.1 hypothetical protein 943730 12610644 SPSE_0884 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015035.1 942201 D 984892 CDS YP_006015036.1 386318873 12610645 943740..944537 1 NC_017568.1 membrane protein 944537 12610645 SPSE_0885 Staphylococcus pseudintermedius ED99 membrane protein YP_006015036.1 943740 D 984892 CDS YP_006015037.1 386318874 12610646 complement(945008..945985) 1 NC_017568.1 identified by match to protein family HMM PF04307; membrane bound metal dependent hydrolase 945985 12610646 SPSE_0886 Staphylococcus pseudintermedius ED99 membrane bound metal dependent hydrolase YP_006015037.1 945008 R 984892 CDS YP_006015038.1 386318875 12610647 946076..947122 1 NC_017568.1 identified by match to protein family HMM PF00730, match to protein family HMM TIGR01084; A/G-specific adenine glycosylase 947122 mutY 12610647 mutY Staphylococcus pseudintermedius ED99 A/G-specific adenine glycosylase YP_006015038.1 946076 D 984892 CDS YP_006015039.1 386318876 12610648 947188..947730 1 NC_017568.1 identified by match to protein family HMM PF04167; hypothetical protein 947730 12610648 SPSE_0888 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015039.1 947188 D 984892 CDS YP_006015040.1 386318877 12610649 948508..950244 1 NC_017568.1 identified by match to protein family HMM PF00005, match to protein family HMM PF00664; ABC-type multidrug protein lipid transport system ATPase component 950244 12610649 SPSE_0889 Staphylococcus pseudintermedius ED99 ABC-type multidrug protein lipid transport system ATPase component YP_006015040.1 948508 D 984892 CDS YP_006015041.1 386318878 12610650 950303..950428 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 950428 12610650 SPSE_0890 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015041.1 950303 D 984892 CDS YP_006015042.1 386318879 12610651 950769..952346 1 NC_017568.1 identified by match to protein family HMM PF01645; glutamate synthase 952346 12610651 SPSE_0891 Staphylococcus pseudintermedius ED99 glutamate synthase YP_006015042.1 950769 D 984892 CDS YP_006015043.1 386318880 12610652 complement(952494..953588) 1 NC_017568.1 identified by match to protein family HMM PF06081; membrane protein 953588 12610652 SPSE_0892 Staphylococcus pseudintermedius ED99 membrane protein YP_006015043.1 952494 R 984892 CDS YP_006015044.1 386318881 12610653 complement(953682..954968) 1 NC_017568.1 identified by match to protein family HMM PF00202, match to protein family HMM TIGR00713; glutamate-1-semialdehyde-2,1-aminomutase 954968 hemL2 12610653 hemL2 Staphylococcus pseudintermedius ED99 glutamate-1-semialdehyde-2,1-aminomutase YP_006015044.1 953682 R 984892 CDS YP_006015045.1 386318882 12610654 955051..955509 1 NC_017568.1 identified by match to protein family HMM PF00578, match to protein family HMM PF08534; putative peroxiredoxin 955509 12610654 SPSE_0894 Staphylococcus pseudintermedius ED99 putative peroxiredoxin YP_006015045.1 955051 D 984892 CDS YP_006015046.1 386318883 12610655 955516..956466 1 NC_017568.1 identified by match to protein family HMM PF00389, match to protein family HMM PF02826; phosphoglycerate dehydrogenase 956466 12610655 SPSE_0895 Staphylococcus pseudintermedius ED99 phosphoglycerate dehydrogenase YP_006015046.1 955516 D 984892 CDS YP_006015047.1 386318884 12610656 956547..957005 1 NC_017568.1 identified by match to protein family HMM PF01475; peroxide-responsive repressor 957005 perR 12610656 perR Staphylococcus pseudintermedius ED99 peroxide-responsive repressor YP_006015047.1 956547 D 984892 CDS YP_006015048.1 386318885 12610685 965381..965626 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 965626 12610685 SPSE_0924 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015048.1 965381 D 984892 CDS YP_006015049.1 386318886 12610686 965748..966233 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 966233 12610686 SPSE_0925 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015049.1 965748 D 984892 CDS YP_006015050.1 386318887 12610687 966255..966665 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 966665 12610687 SPSE_0926 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015050.1 966255 D 984892 CDS YP_006015051.1 386318888 12610688 966685..966945 1 NC_017568.1 hypothetical protein 966945 12610688 SPSE_0927 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015051.1 966685 D 984892 CDS YP_006015052.1 386318889 12610689 967012..967272 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 967272 12610689 SPSE_0928 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015052.1 967012 D 984892 CDS YP_006015053.1 386318890 12610690 967591..967710 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 967710 12610690 SPSE_0929 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015053.1 967591 D 984892 CDS YP_006015054.1 386318891 12610691 967739..968020 1 NC_017568.1 hypothetical protein 968020 12610691 SPSE_0930 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015054.1 967739 D 984892 CDS YP_006015055.1 386318892 12610692 968179..968454 1 NC_017568.1 hypothetical protein 968454 12610692 SPSE_0931 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015055.1 968179 D 984892 CDS YP_006015056.1 386318893 12610693 968509..969039 1 NC_017568.1 hypothetical protein 969039 12610693 SPSE_0932 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015056.1 968509 D 984892 CDS YP_006015057.1 386318894 12610694 969051..969449 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 969449 12610694 SPSE_0933 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015057.1 969051 D 984892 CDS YP_006015058.1 386318895 12610695 969489..969680 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 969680 12610695 SPSE_0934 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015058.1 969489 D 984892 CDS YP_006015059.1 386318896 12610696 969728..970492 1 NC_017568.1 identified by match to protein family HMM PF05257; hypothetical protein 970492 12610696 SPSE_0935 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015059.1 969728 D 984892 CDS YP_006015060.1 386318897 12610697 970496..971143 1 NC_017568.1 hypothetical protein 971143 12610697 SPSE_0936 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015060.1 970496 D 984892 CDS YP_006015061.1 386318898 12610698 971241..971480 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 971480 12610698 SPSE_0937 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015061.1 971241 D 984892 CDS YP_006015062.1 386318899 12610699 971525..971800 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 971800 12610699 SPSE_0938 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015062.1 971525 D 984892 CDS YP_006015063.1 386318900 12610701 973112..974170 1 NC_017568.1 identified by match to protein family HMM PF02378; hypothetical protein 974170 12610701 SPSE_0940 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015063.1 973112 D 984892 CDS YP_006015064.1 386318901 12610702 974356..975816 1 NC_017568.1 identified by match to protein family HMM PF00497, match to protein family HMM PF00528, match to protein family HMM TIGR01726; glutamine-binding periplasmic protein 975816 12610702 SPSE_0941 Staphylococcus pseudintermedius ED99 glutamine-binding periplasmic protein YP_006015064.1 974356 D 984892 CDS YP_006015065.1 386318902 12610703 975809..976534 1 NC_017568.1 identified by match to protein family HMM PF00005, match to protein family HMM PF02463; glutamine transport ATP-binding protein GlnQ 976534 glnQ 12610703 glnQ Staphylococcus pseudintermedius ED99 glutamine transport ATP-binding protein GlnQ YP_006015065.1 975809 D 984892 CDS YP_006015066.1 386318903 12610704 976690..977820 1 NC_017568.1 identified by match to protein family HMM PF00037, match to protein family HMM PF08331, match to protein family HMM TIGR00276; iron-sulfur cluster-binding protein 977820 12610704 SPSE_0943 Staphylococcus pseudintermedius ED99 iron-sulfur cluster-binding protein YP_006015066.1 976690 D 984892 CDS YP_006015067.1 386318904 12610705 977820..978290 1 NC_017568.1 identified by match to protein family HMM PF00588, match to protein family HMM TIGR00185; TrmH family RNA methyltransferase 978290 12610705 SPSE_0944 Staphylococcus pseudintermedius ED99 TrmH family RNA methyltransferase YP_006015067.1 977820 D 984892 CDS YP_006015068.1 386318905 12610706 978483..979082 1 NC_017568.1 glucosamine-6-phosphate isomerase 979082 12610706 SPSE_0945 Staphylococcus pseudintermedius ED99 glucosamine-6-phosphate isomerase YP_006015068.1 978483 D 984892 CDS YP_006015069.1 386318906 12610707 979103..979264 1 NC_017568.1 hypothetical protein 979264 12610707 SPSE_0946 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015069.1 979103 D 984892 CDS YP_006015070.1 386318907 12610708 979385..979828 1 NC_017568.1 hypothetical protein 979828 12610708 SPSE_0947 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015070.1 979385 D 984892 CDS YP_006015071.1 386318908 12610709 980058..981443 1 NC_017568.1 identified by match to protein family HMM PF00206, match to protein family HMM TIGR00979; class II fumarate hydratase 981443 fumC 12610709 fumC Staphylococcus pseudintermedius ED99 class II fumarate hydratase YP_006015071.1 980058 D 984892 CDS YP_006015072.1 386318909 12610710 981464..982990 1 NC_017568.1 identified by match to protein family HMM PF02541; putative exopolyphosphatase 982990 12610710 SPSE_0949 Staphylococcus pseudintermedius ED99 putative exopolyphosphatase YP_006015072.1 981464 D 984892 CDS YP_006015073.1 386318910 12610711 983066..985234 1 NC_017568.1 identified by match to protein family HMM PF02503; polyphosphate kinase 985234 ppk 12610711 ppk Staphylococcus pseudintermedius ED99 polyphosphate kinase YP_006015073.1 983066 D 984892 CDS YP_006015074.1 386318911 12610712 complement(985302..986132) 1 NC_017568.1 identified by match to protein family HMM PF00849; RluD subfamily ribosomal large subunit pseudouridine synthase 986132 12610712 SPSE_0951 Staphylococcus pseudintermedius ED99 RluD subfamily ribosomal large subunit pseudouridine synthase YP_006015074.1 985302 R 984892 CDS YP_006015075.1 386318912 12610713 986286..987410 1 NC_017568.1 identified by match to protein family HMM PF01590, match to protein family HMM PF02518, match to protein family HMM PF07730; signal transduction histidine kinase 987410 12610713 SPSE_0952 Staphylococcus pseudintermedius ED99 signal transduction histidine kinase YP_006015075.1 986286 D 984892 CDS YP_006015076.1 386318913 12610714 987410..988036 1 NC_017568.1 identified by match to protein family HMM PF00072, match to protein family HMM PF00196; two-component response regulator 988036 12610714 SPSE_0953 Staphylococcus pseudintermedius ED99 two-component response regulator YP_006015076.1 987410 D 984892 CDS YP_006015077.1 386318914 12610715 complement(988186..989472) 1 NC_017568.1 identified by match to protein family HMM PF00375; proton/sodium-glutamate symport protein 989472 12610715 SPSE_0954 Staphylococcus pseudintermedius ED99 proton/sodium-glutamate symport protein YP_006015077.1 988186 R 984892 CDS YP_006015078.1 386318915 12610716 989668..990552 1 NC_017568.1 identified by match to protein family HMM PF01545, match to protein family HMM TIGR01297; cation efflux family protein 990552 12610716 SPSE_0955 Staphylococcus pseudintermedius ED99 cation efflux family protein YP_006015078.1 989668 D 984892 CDS YP_006015079.1 386318916 12610717 992418..992882 1 NC_017568.1 Cro/CI family transcriptional regulator 992882 12610717 SPSE_0956 Staphylococcus pseudintermedius ED99 Cro/CI family transcriptional regulator YP_006015079.1 992418 D 984892 CDS YP_006015080.1 386318917 12610718 993107..994237 1 NC_017568.1 identified by match to protein family HMM PF04286; hypothetical protein 994237 12610718 SPSE_0957 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015080.1 993107 D 984892 CDS YP_006015081.1 386318918 12610719 994326..994670 1 NC_017568.1 identified by match to protein family HMM PF06133; hypothetical protein 994670 12610719 SPSE_0958 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015081.1 994326 D 984892 CDS YP_006015082.1 386318919 12610720 994924..996111 1 NC_017568.1 identified by match to protein family HMM PF00149; DNA repair exonuclease family protein 996111 12610720 SPSE_0959 Staphylococcus pseudintermedius ED99 DNA repair exonuclease family protein YP_006015082.1 994924 D 984892 CDS YP_006015083.1 386318920 12610721 996115..999039 1 NC_017568.1 hypothetical protein 999039 12610721 SPSE_0960 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015083.1 996115 D 984892 CDS YP_006015084.1 386318921 12610722 999058..999999 1 NC_017568.1 identified by match to protein family HMM PF01336, match to protein family HMM PF01966; 3'-5' exoribonuclease YhaM 999999 cbf1 12610722 cbf1 Staphylococcus pseudintermedius ED99 3'-5' exoribonuclease YhaM YP_006015084.1 999058 D 984892 CDS YP_006015085.1 386318922 12610723 complement(1000209..1001165) 1 NC_017568.1 identified by match to protein family HMM PF00639; foldase protein PrsA 1001165 prsA 12610723 prsA Staphylococcus pseudintermedius ED99 foldase protein PrsA YP_006015085.1 1000209 R 984892 CDS YP_006015086.1 386318923 12610724 complement(1001349..1001465) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1001465 12610724 SPSE_0963 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015086.1 1001349 R 984892 CDS YP_006015087.1 386318924 12610725 complement(1001846..1002412) 1 NC_017568.1 hypothetical protein 1002412 12610725 SPSE_0964 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015087.1 1001846 R 984892 CDS YP_006015088.1 386318925 12610726 complement(1002461..1002991) 1 NC_017568.1 identified by match to protein family HMM PF01047; protease production regulatory protein Hpr 1002991 12610726 SPSE_0965 Staphylococcus pseudintermedius ED99 protease production regulatory protein Hpr YP_006015088.1 1002461 R 984892 CDS YP_006015089.1 386318926 12610727 complement(1003093..1003449) 1 NC_017568.1 hypothetical protein 1003449 12610727 SPSE_0966 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015089.1 1003093 R 984892 CDS YP_006015090.1 386318927 12610728 complement(1003527..1003952) 1 NC_017568.1 identified by match to protein family HMM PF01230; histidine triad (HIT) protein 1003952 12610728 SPSE_0967 Staphylococcus pseudintermedius ED99 histidine triad (HIT) protein YP_006015090.1 1003527 R 984892 CDS YP_006015091.1 386318928 12610729 1004088..1004825 1 NC_017568.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1004825 12610729 SPSE_0968 Staphylococcus pseudintermedius ED99 ABC transporter ATP-binding protein YP_006015091.1 1004088 D 984892 CDS YP_006015092.1 386318929 12610730 1004822..1006036 1 NC_017568.1 identified by match to protein family HMM PF05975; ABC transporter permease 1006036 12610730 SPSE_0969 Staphylococcus pseudintermedius ED99 ABC transporter permease YP_006015092.1 1004822 D 984892 CDS YP_006015093.1 386318930 12610731 1006578..1007864 1 NC_017568.1 identified by match to protein family HMM PF00078, match to protein family HMM PF08388; RNA-directed DNA polymerase 1007864 12610731 SPSE_0970 Staphylococcus pseudintermedius ED99 RNA-directed DNA polymerase YP_006015093.1 1006578 D 984892 CDS YP_006015094.1 386318931 12610732 complement(1007932..1008444) 1 NC_017568.1 signal transduction protein TRAP 1008444 traP 12610732 traP Staphylococcus pseudintermedius ED99 signal transduction protein TRAP YP_006015094.1 1007932 R 984892 CDS YP_006015095.1 386318932 12610733 1008755..1009789 1 NC_017568.1 identified by match to protein family HMM PF01208, match to protein family HMM TIGR01464; uroporphyrinogen decarboxylase 1009789 hemE 12610733 hemE Staphylococcus pseudintermedius ED99 uroporphyrinogen decarboxylase YP_006015095.1 1008755 D 984892 CDS YP_006015096.1 386318933 12610734 1009827..1010759 1 NC_017568.1 identified by match to protein family HMM PF00762, match to protein family HMM TIGR00109; ferrochelatase 1010759 hemH 12610734 hemH Staphylococcus pseudintermedius ED99 ferrochelatase YP_006015096.1 1009827 D 984892 CDS YP_006015097.1 386318934 12610735 1010765..1012168 1 NC_017568.1 identified by match to protein family HMM PF01266, match to protein family HMM PF01593, match to protein family HMM TIGR00562; protoporphyrinogen oxidase 1012168 hemG 12610735 hemG Staphylococcus pseudintermedius ED99 protoporphyrinogen oxidase YP_006015097.1 1010765 D 984892 CDS YP_006015098.1 386318935 12610736 1012426..1012980 1 NC_017568.1 identified by match to protein family HMM PF06821; hypothetical protein 1012980 12610736 SPSE_0975 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015098.1 1012426 D 984892 CDS YP_006015099.1 386318936 12610746 1014840..1014953 1 NC_017568.1 hypothetical protein 1014953 12610746 SPSE_0985 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015099.1 1014840 D 984892 CDS YP_006015100.1 386318937 12610747 1015318..1016664 1 NC_017568.1 identified by match to protein family HMM PF04233, match to protein family HMM TIGR01641; hypothetical protein 1016664 12610747 SPSE_0986 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015100.1 1015318 D 984892 CDS YP_006015101.1 386318938 12610748 1016661..1016855 1 NC_017568.1 hypothetical protein 1016855 12610748 SPSE_0987 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015101.1 1016661 D 984892 CDS YP_006015102.1 386318939 12610749 1016873..1016992 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1016992 12610749 SPSE_0988 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015102.1 1016873 D 984892 CDS YP_006015103.1 386318940 12610750 1017033..1017617 1 NC_017568.1 hypothetical protein 1017617 12610750 SPSE_0989 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015103.1 1017033 D 984892 CDS YP_006015104.1 386318941 12610751 complement(1017676..1018656) 1 NC_017568.1 identified by match to protein family HMM PF07968, match to protein family HMM TIGR01002; synergohymenotropic toxin 1018656 lukF-I 12610751 lukF-I Staphylococcus pseudintermedius ED99 synergohymenotropic toxin YP_006015104.1 1017676 R 984892 CDS YP_006015105.1 386318942 12610752 complement(1018658..1019590) 1 NC_017568.1 identified by match to protein family HMM PF07968, match to protein family HMM TIGR01002; synergohymenotropic toxin 1019590 lukS-I 12610752 lukS-I Staphylococcus pseudintermedius ED99 synergohymenotropic toxin YP_006015105.1 1018658 R 984892 CDS YP_006015106.1 386318943 12610753 1020112..1020660 1 NC_017568.1 identified by match to protein family HMM PF00300; phosphoglycerate mutase 1020660 12610753 SPSE_0992 Staphylococcus pseudintermedius ED99 phosphoglycerate mutase YP_006015106.1 1020112 D 984892 CDS YP_006015107.1 386318944 12610754 1020802..1021872 1 NC_017568.1 L-ascorbate 6-phosphate lactonase 1021872 ulaG 12610754 ulaG Staphylococcus pseudintermedius ED99 L-ascorbate 6-phosphate lactonase YP_006015107.1 1020802 D 984892 CDS YP_006015108.1 386318945 12610755 1021900..1023327 1 NC_017568.1 identified by match to protein family HMM PF04215; PTS system, 3-keto-L-gulonate/L-ascorbate specific IIC component 1023327 sgaT 12610755 sgaT Staphylococcus pseudintermedius ED99 PTS system, 3-keto-L-gulonate/L-ascorbate specific IIC component YP_006015108.1 1021900 D 984892 CDS YP_006015109.1 386318946 12610756 1023351..1023629 1 NC_017568.1 identified by match to protein family HMM PF02302; PTS system, 3-keto-L-gulonate/L-ascorbate specific IIB component 1023629 sgaB 12610756 sgaB Staphylococcus pseudintermedius ED99 PTS system, 3-keto-L-gulonate/L-ascorbate specific IIB component YP_006015109.1 1023351 D 984892 CDS YP_006015110.1 386318947 12610757 1023642..1024109 1 NC_017568.1 identified by match to protein family HMM PF00359; PTS system, 3-keto-L-gulonate/L-ascorbate specific IIB component 1024109 sgaC 12610757 sgaC Staphylococcus pseudintermedius ED99 PTS system, 3-keto-L-gulonate/L-ascorbate specific IIB component YP_006015110.1 1023642 D 984892 CDS YP_006015111.1 386318948 12610758 1024126..1024764 1 NC_017568.1 identified by match to protein family HMM PF00215; 3-keto-L-gulonate-6-phosphate decarboxylase 1024764 ulaD 12610758 ulaD Staphylococcus pseudintermedius ED99 3-keto-L-gulonate-6-phosphate decarboxylase YP_006015111.1 1024126 D 984892 CDS YP_006015112.1 386318949 12610759 1024764..1025627 1 NC_017568.1 identified by match to protein family HMM PF01261, match to protein family HMM TIGR00542; hexulose-6-phosphate isomerase 1025627 12610759 SPSE_0998 Staphylococcus pseudintermedius ED99 hexulose-6-phosphate isomerase YP_006015112.1 1024764 D 984892 CDS YP_006015113.1 386318950 12610760 1025620..1026315 1 NC_017568.1 identified by match to protein family HMM PF00596; L-ribulose-5-phosphate 4-epimerase 1026315 araD 12610760 araD Staphylococcus pseudintermedius ED99 L-ribulose-5-phosphate 4-epimerase YP_006015113.1 1025620 D 984892 CDS YP_006015114.1 386318951 12610761 1026379..1028001 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1028001 12610761 SPSE_1000 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015114.1 1026379 D 984892 CDS YP_006015115.1 386318952 12610762 1028176..1029579 1 NC_017568.1 identified by match to protein family HMM PF00501, match to protein family HMM TIGR01923; o-succinylbenzoate--CoA ligase 1029579 menE 12610762 menE Staphylococcus pseudintermedius ED99 o-succinylbenzoate--CoA ligase YP_006015115.1 1028176 D 984892 CDS YP_006015116.1 386318953 12610763 1029582..1030568 1 NC_017568.1 identified by match to protein family HMM TIGR01928; O-succinylbenzoic acid (OSB) synthetase 1030568 menC 12610763 menC Staphylococcus pseudintermedius ED99 O-succinylbenzoic acid (OSB) synthetase YP_006015116.1 1029582 D 984892 CDS YP_006015117.1 386318954 12610764 complement(1030544..1030795) 1 NC_017568.1 identified by match to protein family HMM PF01809, match to protein family HMM TIGR00278; hypothetical protein 1030795 12610764 SPSE_1003 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015117.1 1030544 R 984892 CDS YP_006015118.1 386318955 12610765 1030854..1031324 1 NC_017568.1 identified by match to protein family HMM PF00293, match to protein family HMM TIGR02705; nucleoside triphosphatase YtkD 1031324 12610765 SPSE_1004 Staphylococcus pseudintermedius ED99 nucleoside triphosphatase YtkD YP_006015118.1 1030854 D 984892 CDS YP_006015119.1 386318956 12610766 1031329..1032081 1 NC_017568.1 hypothetical protein 1032081 12610766 SPSE_1005 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015119.1 1031329 D 984892 CDS YP_006015120.1 386318957 12610767 complement(1032479..1034059) 1 NC_017568.1 identified by match to protein family HMM PF01293, match to protein family HMM TIGR00224; phosphoenolpyruvate carboxykinase 1034059 pckA 12610767 pckA Staphylococcus pseudintermedius ED99 phosphoenolpyruvate carboxykinase YP_006015120.1 1032479 R 984892 CDS YP_006015121.1 386318958 12610768 1034523..1035722 1 NC_017568.1 identified by match to protein family HMM PF00438, match to protein family HMM PF02772, match to protein family HMM PF02773, match to protein family HMM TIGR01034; S-adenosylmethionine synthetase 1035722 metK 12610768 metK Staphylococcus pseudintermedius ED99 S-adenosylmethionine synthetase YP_006015121.1 1034523 D 984892 CDS YP_006015122.1 386318959 12610769 1035810..1036721 1 NC_017568.1 hypothetical protein 1036721 12610769 SPSE_1009 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015122.1 1035810 D 984892 CDS YP_006015123.1 386318960 12610770 1036863..1037699 1 NC_017568.1 identified by match to protein family HMM PF00248; oxidoreductase, aldo/keto reductase family 1037699 12610770 SPSE_1010 Staphylococcus pseudintermedius ED99 oxidoreductase, aldo/keto reductase family YP_006015123.1 1036863 D 984892 CDS YP_006015124.1 386318961 12610771 complement(1037801..1038148) 1 NC_017568.1 identified by match to protein family HMM PF02537, match to protein family HMM TIGR00494; CrcB-like protein 1038148 crcB1 12610771 crcB1 Staphylococcus pseudintermedius ED99 CrcB-like protein YP_006015124.1 1037801 R 984892 CDS YP_006015125.1 386318962 12610772 complement(1038145..1038510) 1 NC_017568.1 identified by match to protein family HMM PF02537; CrcB-like protein 1038510 crcB2 12610772 crcB2 Staphylococcus pseudintermedius ED99 CrcB-like protein YP_006015125.1 1038145 R 984892 CDS YP_006015126.1 386318963 12610773 complement(1038543..1038845) 1 NC_017568.1 hypothetical protein 1038845 12610773 SPSE_1013 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015126.1 1038543 R 984892 CDS YP_006015127.1 386318964 12610774 1038998..1039708 1 NC_017568.1 identified by match to protein family HMM PF00923, match to protein family HMM TIGR02134; putative transaldolase 1039708 tal 12610774 tal Staphylococcus pseudintermedius ED99 putative transaldolase YP_006015127.1 1038998 D 984892 CDS YP_006015128.1 386318965 12610775 1039875..1040324 1 NC_017568.1 hypothetical protein 1040324 12610775 SPSE_1015 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015128.1 1039875 D 984892 CDS YP_006015129.1 386318966 12610776 complement(1040327..1040758) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1040758 12610776 SPSE_1016 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015129.1 1040327 R 984892 CDS YP_006015130.1 386318967 12610777 complement(1040761..1041123) 1 NC_017568.1 hypothetical protein 1041123 12610777 SPSE_1017 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015130.1 1040761 R 984892 CDS YP_006015131.1 386318968 12610778 1041447..1041671 1 NC_017568.1 hypothetical protein 1041671 12610778 SPSE_1018 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015131.1 1041447 D 984892 CDS YP_006015132.1 386318969 12610779 1041828..1042691 1 NC_017568.1 identified by match to protein family HMM PF01832; glucosaminidase 1042691 gad 12610779 gad Staphylococcus pseudintermedius ED99 glucosaminidase YP_006015132.1 1041828 D 984892 CDS YP_006015133.1 386318970 12610780 1043080..1044648 1 NC_017568.1 hypothetical protein 1044648 12610780 SPSE_1020 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015133.1 1043080 D 984892 CDS YP_006015134.1 386318971 12610781 1045105..1046151 1 NC_017568.1 identified by match to protein family HMM PF00383, match to protein family HMM PF01872, match to protein family HMM TIGR00326; riboflavin specific deaminase 1046151 ribD 12610781 ribD Staphylococcus pseudintermedius ED99 riboflavin specific deaminase YP_006015134.1 1045105 D 984892 CDS YP_006015135.1 386318972 12610782 1046156..1046785 1 NC_017568.1 identified by match to protein family HMM PF00677, match to protein family HMM TIGR00187; riboflavin synthase subunit alpha 1046785 ribE 12610782 ribE Staphylococcus pseudintermedius ED99 riboflavin synthase subunit alpha YP_006015135.1 1046156 D 984892 CDS YP_006015136.1 386318973 12610783 1046799..1047980 1 NC_017568.1 identified by match to protein family HMM PF00925, match to protein family HMM PF00926, match to protein family HMM TIGR00505, match to protein family HMM TIGR00506; 3,4-dihydroxy-2-butanone 4- phosphate synthase/GTP cyclohydrolase II 1047980 ribA 12610783 ribA Staphylococcus pseudintermedius ED99 3,4-dihydroxy-2-butanone 4- phosphate synthase/GTP cyclohydrolase II YP_006015136.1 1046799 D 984892 CDS YP_006015137.1 386318974 12610784 1047998..1048462 1 NC_017568.1 identified by match to protein family HMM PF00885, match to protein family HMM TIGR00114; 6,7-dimethyl-8-ribityllumazine synthase 1048462 ribH 12610784 ribH Staphylococcus pseudintermedius ED99 6,7-dimethyl-8-ribityllumazine synthase YP_006015137.1 1047998 D 984892 CDS YP_006015138.1 386318975 12610785 complement(1048587..1049573) 1 NC_017568.1 identified by match to protein family HMM PF01619; proline dehydrogenase 1049573 putA 12610785 putA Staphylococcus pseudintermedius ED99 proline dehydrogenase YP_006015138.1 1048587 R 984892 CDS YP_006015139.1 386318976 12610786 complement(1049738..1049878) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1049878 12610786 SPSE_1027 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015139.1 1049738 R 984892 CDS YP_006015140.1 386318977 12610787 1050059..1050391 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1050391 12610787 SPSE_1028 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015140.1 1050059 D 984892 CDS YP_006015141.1 386318978 12610788 1050534..1051358 1 NC_017568.1 putative lysophospholipase 1051358 12610788 SPSE_1029 Staphylococcus pseudintermedius ED99 putative lysophospholipase YP_006015141.1 1050534 D 984892 CDS YP_006015142.1 386318979 12610789 1051519..1052469 1 NC_017568.1 identified by match to protein family HMM PF00056, match to protein family HMM PF02866, match to protein family HMM TIGR01771; L-lactate dehydrogenase 1052469 ldh 12610789 ldh Staphylococcus pseudintermedius ED99 L-lactate dehydrogenase YP_006015142.1 1051519 D 984892 CDS YP_006015143.1 386318980 12610790 1052779..1053189 1 NC_017568.1 identified by match to protein family HMM PF01047, match to protein family HMM TIGR01889; repressor of toxins 1053189 rot 12610790 rot Staphylococcus pseudintermedius ED99 repressor of toxins YP_006015143.1 1052779 D 984892 CDS YP_006015144.1 386318981 12610791 complement(1053692..1054255) 1 NC_017568.1 identified by match to protein family HMM PF06962; rRNA methylase 1054255 12610791 SPSE_1032 Staphylococcus pseudintermedius ED99 rRNA methylase YP_006015144.1 1053692 R 984892 CDS YP_006015145.1 386318982 12610792 complement(1054252..1055205) 1 NC_017568.1 identified by match to protein family HMM PF04055, match to protein family HMM TIGR01212; radical SAM protein 1055205 12610792 SPSE_1033 Staphylococcus pseudintermedius ED99 radical SAM protein YP_006015145.1 1054252 R 984892 CDS YP_006015146.1 386318983 12610793 1055353..1056534 1 NC_017568.1 identified by match to protein family HMM PF07690; multidrug resistance transporter protein 1056534 12610793 SPSE_1034 Staphylococcus pseudintermedius ED99 multidrug resistance transporter protein YP_006015146.1 1055353 D 984892 CDS YP_006015147.1 386318984 12610794 1056825..1059257 1 NC_017568.1 identified by match to protein family HMM PF00133, match to protein family HMM PF08264, match to protein family HMM PF09334, match to protein family HMM TIGR00396; leucyl-tRNA synthetase 1059257 leuS 12610794 leuS Staphylococcus pseudintermedius ED99 leucyl-tRNA synthetase YP_006015147.1 1056825 D 984892 CDS YP_006015148.1 386318985 12610795 1059284..1059595 1 NC_017568.1 identified by match to protein family HMM PF00581; rhodanese-like domain-containing protein 1059595 12610795 SPSE_1036 Staphylococcus pseudintermedius ED99 rhodanese-like domain-containing protein YP_006015148.1 1059284 D 984892 CDS YP_006015149.1 386318986 12610796 complement(1060226..1061482) 1 NC_017568.1 identified by match to protein family HMM PF00890, match to protein family HMM PF01134, match to protein family HMM PF01266, match to protein family HMM PF03486, match to protein family HMM PF07992, match to protein family HMM TIGR00275; hypothetical protein 1061482 12610796 SPSE_1037 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015149.1 1060226 R 984892 CDS YP_006015150.1 386318987 12610797 1061599..1063233 1 NC_017568.1 identified by match to protein family HMM PF01943, match to protein family HMM PF03023; polysaccharide biosynthesis protein 1063233 12610797 SPSE_1038 Staphylococcus pseudintermedius ED99 polysaccharide biosynthesis protein YP_006015150.1 1061599 D 984892 CDS YP_006015151.1 386318988 12610798 1063233..1063931 1 NC_017568.1 identified by match to protein family HMM PF00849, match to protein family HMM PF01479, match to protein family HMM TIGR00093; ribosomal small subunit pseudouridine synthase A 1063931 12610798 SPSE_1039 Staphylococcus pseudintermedius ED99 ribosomal small subunit pseudouridine synthase A YP_006015151.1 1063233 D 984892 CDS YP_006015152.1 386318989 12610799 1064015..1064413 1 NC_017568.1 hypothetical protein 1064413 12610799 SPSE_1040 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015152.1 1064015 D 984892 CDS YP_006015153.1 386318990 12610800 1064573..1064686 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1064686 12610800 SPSE_1041 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015153.1 1064573 D 984892 CDS YP_006015154.1 386318991 12610801 1064736..1066145 1 NC_017568.1 identified by match to protein family HMM PF01546, match to protein family HMM PF07687, match to protein family HMM TIGR01887; putative dipeptidase 1066145 12610801 SPSE_1042 Staphylococcus pseudintermedius ED99 putative dipeptidase YP_006015154.1 1064736 D 984892 CDS YP_006015155.1 386318992 12610802 1066149..1066997 1 NC_017568.1 identified by match to protein family HMM PF01063, match to protein family HMM TIGR01121; D-alanine aminotransferase 1066997 dat 12610802 dat Staphylococcus pseudintermedius ED99 D-alanine aminotransferase YP_006015155.1 1066149 D 984892 CDS YP_006015156.1 386318993 12610803 1067230..1068021 1 NC_017568.1 identified by match to protein family HMM PF01636; phosphotransferase family protein 1068021 12610803 SPSE_1044 Staphylococcus pseudintermedius ED99 phosphotransferase family protein YP_006015156.1 1067230 D 984892 CDS YP_006015157.1 386318994 12610804 1068037..1068690 1 NC_017568.1 identified by match to protein family HMM PF02390, match to protein family HMM TIGR00091; tRNA (guanine-N(7)-)-methyltransferase 1068690 trmB 12610804 trmB Staphylococcus pseudintermedius ED99 tRNA (guanine-N(7)-)-methyltransferase YP_006015157.1 1068037 D 984892 CDS YP_006015158.1 386318995 12610805 1068962..1069795 1 NC_017568.1 identified by match to protein family HMM PF00753; metallo-beta-lactamase superfamily protein 1069795 12610805 SPSE_1046 Staphylococcus pseudintermedius ED99 metallo-beta-lactamase superfamily protein YP_006015158.1 1068962 D 984892 CDS YP_006015159.1 386318996 12610806 complement(1069862..1070179) 1 NC_017568.1 hypothetical protein 1070179 12610806 SPSE_1047 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015159.1 1069862 R 984892 CDS YP_006015160.1 386318997 12610807 1070275..1071342 1 NC_017568.1 identified by match to protein family HMM PF05343; glutamyl aminopeptidase 1071342 12610807 SPSE_1048 Staphylococcus pseudintermedius ED99 glutamyl aminopeptidase YP_006015160.1 1070275 D 984892 CDS YP_006015161.1 386318998 12610808 1071354..1071662 1 NC_017568.1 identified by match to protein family HMM PF00085; putative thioredoxin 1071662 12610808 SPSE_1049 Staphylococcus pseudintermedius ED99 putative thioredoxin YP_006015161.1 1071354 D 984892 CDS YP_006015162.1 386318999 12610809 1071755..1072621 1 NC_017568.1 identified by match to protein family HMM PF07285; hypothetical protein 1072621 12610809 SPSE_1050 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015162.1 1071755 D 984892 CDS YP_006015163.1 386319000 12610810 1072627..1073226 1 NC_017568.1 identified by match to protein family HMM PF01588; phenylalanyl-tRNA synthetase 1073226 12610810 SPSE_1051 Staphylococcus pseudintermedius ED99 phenylalanyl-tRNA synthetase YP_006015163.1 1072627 D 984892 CDS YP_006015164.1 386319001 12610811 1073246..1076464 1 NC_017568.1 identified by match to protein family HMM PF01580, match to protein family HMM PF09397; DNA segregation ATPase FtsK SpoIIIE family protein 1076464 12610811 SPSE_1052 Staphylococcus pseudintermedius ED99 DNA segregation ATPase FtsK SpoIIIE family protein YP_006015164.1 1073246 D 984892 CDS YP_006015165.1 386319002 12610812 1076493..1077806 1 NC_017568.1 identified by match to protein family HMM PF01225, match to protein family HMM PF02875, match to protein family HMM PF08245, match to protein family HMM TIGR01082; UDP-N-acetylmuramate--L-alanine ligase 1077806 murC 12610812 murC Staphylococcus pseudintermedius ED99 UDP-N-acetylmuramate--L-alanine ligase YP_006015165.1 1076493 D 984892 CDS YP_006015166.1 386319003 12610813 1077885..1078493 1 NC_017568.1 identified by match to protein family HMM PF06103; hypothetical protein 1078493 12610813 SPSE_1054 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015166.1 1077885 D 984892 CDS YP_006015167.1 386319004 12610814 1078589..1079686 1 NC_017568.1 hypothetical protein 1079686 12610814 SPSE_1055 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015167.1 1078589 D 984892 CDS YP_006015168.1 386319005 12610815 1080006..1081097 1 NC_017568.1 identified by match to protein family HMM PF00793, match to protein family HMM PF01817, match to protein family HMM TIGR01361, match to protein family HMM TIGR01801; 3-deoxy-7-phosphoheptulonate synthase 1081097 12610815 SPSE_1056 Staphylococcus pseudintermedius ED99 3-deoxy-7-phosphoheptulonate synthase YP_006015168.1 1080006 D 984892 CDS YP_006015169.1 386319006 12610816 1081505..1082494 1 NC_017568.1 identified by match to protein family HMM PF00356, match to protein family HMM PF00532, match to protein family HMM TIGR01481; catabolite control protein A 1082494 ccpA 12610816 ccpA Staphylococcus pseudintermedius ED99 catabolite control protein A YP_006015169.1 1081505 D 984892 CDS YP_006015170.1 386319007 12610817 complement(1082613..1083770) 1 NC_017568.1 identified by match to protein family HMM PF00850; acetoin utilization protein 1083770 acuC 12610817 acuC Staphylococcus pseudintermedius ED99 acetoin utilization protein YP_006015170.1 1082613 R 984892 CDS YP_006015171.1 386319008 12610818 complement(1083784..1084416) 1 NC_017568.1 acetoin utilization protein 1084416 acuA 12610818 acuA Staphylococcus pseudintermedius ED99 acetoin utilization protein YP_006015171.1 1083784 R 984892 CDS YP_006015172.1 386319009 12610819 1084583..1086292 1 NC_017568.1 identified by match to protein family HMM PF00501; acetyl-coenzyme A synthetase 1086292 acsA 12610819 acsA Staphylococcus pseudintermedius ED99 acetyl-coenzyme A synthetase YP_006015172.1 1084583 D 984892 CDS YP_006015173.1 386319010 12610820 1086608..1088275 1 NC_017568.1 identified by match to protein family HMM PF01268; formate--tetrahydrofolate ligase 1088275 fhs 12610820 fhs Staphylococcus pseudintermedius ED99 formate--tetrahydrofolate ligase YP_006015173.1 1086608 D 984892 CDS YP_006015174.1 386319011 12610821 complement(1088350..1089249) 1 NC_017568.1 identified by match to protein family HMM PF00912; putative transglycosylase 1089249 12610821 SPSE_1062 Staphylococcus pseudintermedius ED99 putative transglycosylase YP_006015174.1 1088350 R 984892 CDS YP_006015175.1 386319012 12610822 1089595..1090857 1 NC_017568.1 identified by match to protein family HMM PF00579, match to protein family HMM PF01479, match to protein family HMM TIGR00234; tyrosyl-tRNA synthetase 1090857 tyrS 12610822 tyrS Staphylococcus pseudintermedius ED99 tyrosyl-tRNA synthetase YP_006015175.1 1089595 D 984892 CDS YP_006015176.1 386319013 12610823 complement(1090911..1092182) 1 NC_017568.1 identified by match to protein family HMM PF00089; serine protease HtrA 1092182 12610823 SPSE_1064 Staphylococcus pseudintermedius ED99 serine protease HtrA YP_006015176.1 1090911 R 984892 CDS YP_006015177.1 386319014 12610824 1092337..1092954 1 NC_017568.1 identified by match to protein family HMM PF01553, match to protein family HMM TIGR00530; 1-acyl-sn-glycerol-3-phosphate acyltransferase 1092954 12610824 SPSE_1065 Staphylococcus pseudintermedius ED99 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_006015177.1 1092337 D 984892 CDS YP_006015178.1 386319015 12610825 1093162..1094286 1 NC_017568.1 identified by match to protein family HMM PF00702; haloacid dehalogenase-like family hydrolase 1094286 12610825 SPSE_1066 Staphylococcus pseudintermedius ED99 haloacid dehalogenase-like family hydrolase YP_006015178.1 1093162 D 984892 CDS YP_006015179.1 386319016 12610826 complement(1094338..1095933) 1 NC_017568.1 identified by match to protein family HMM PF00389, match to protein family HMM PF01842, match to protein family HMM PF02826, match to protein family HMM TIGR01327; D-3-phosphoglycerate dehydrogenase 1095933 serA 12610826 serA Staphylococcus pseudintermedius ED99 D-3-phosphoglycerate dehydrogenase YP_006015179.1 1094338 R 984892 CDS YP_006015180.1 386319017 12610827 complement(1095923..1097083) 1 NC_017568.1 identified by match to protein family HMM PF00266; class V aminotransferase 1097083 12610827 SPSE_1068 Staphylococcus pseudintermedius ED99 class V aminotransferase YP_006015180.1 1095923 R 984892 CDS YP_006015181.1 386319018 12610828 complement(1097244..1097702) 1 NC_017568.1 identified by match to protein family HMM PF02566, match to protein family HMM TIGR03563; OsmC/Ohr family protein 1097702 12610828 SPSE_1069 Staphylococcus pseudintermedius ED99 OsmC/Ohr family protein YP_006015181.1 1097244 R 984892 CDS YP_006015182.1 386319019 12610829 1097777..1098523 1 NC_017568.1 identified by match to protein family HMM PF03009; glycerophosphoryl diester phosphodiesterase 1098523 12610829 SPSE_1070 Staphylococcus pseudintermedius ED99 glycerophosphoryl diester phosphodiesterase YP_006015182.1 1097777 D 984892 CDS YP_006015183.1 386319020 12610830 complement(1098573..1099526) 1 NC_017568.1 identified by match to protein family HMM PF02423; ornithine cyclodeaminase/mu-crystallin family protein 1099526 12610830 SPSE_1071 Staphylococcus pseudintermedius ED99 ornithine cyclodeaminase/mu-crystallin family protein YP_006015183.1 1098573 R 984892 CDS YP_006015184.1 386319021 12610831 1100360..1100563 1 NC_017568.1 hypothetical protein 1100563 12610831 SPSE_1072 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015184.1 1100360 D 984892 CDS YP_006015185.1 386319022 12610832 1100900..1101643 1 NC_017568.1 authentic truncation; putative map protein, truncated 1101643 12610832 SPSE_1073 Staphylococcus pseudintermedius ED99 putative map protein, truncated YP_006015185.1 1100900 D 984892 CDS YP_006015186.1 386319023 12610833 1101959..1102576 1 NC_017568.1 putative portal protein, truncated 1102576 12610833 SPSE_1074 Staphylococcus pseudintermedius ED99 putative portal protein, truncated YP_006015186.1 1101959 D 984892 CDS YP_006015187.1 386319024 12610834 1102560..1104110 1 NC_017568.1 identified by match to protein family HMM PF04233, match to protein family HMM TIGR01641; hypothetical protein 1104110 12610834 SPSE_1075 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015187.1 1102560 D 984892 CDS YP_006015188.1 386319025 12610835 1104115..1104252 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1104252 12610835 SPSE_1076 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015188.1 1104115 D 984892 CDS YP_006015189.1 386319026 12610836 1104436..1105005 1 NC_017568.1 hypothetical protein 1105005 12610836 SPSE_1077 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015189.1 1104436 D 984892 CDS YP_006015190.1 386319027 12610837 1105020..1105271 1 NC_017568.1 hypothetical protein 1105271 12610837 SPSE_1078 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015190.1 1105020 D 984892 CDS YP_006015191.1 386319028 12610838 complement(1105325..1105927) 1 NC_017568.1 identified by match to protein family HMM PF00163, match to protein family HMM PF01479, match to protein family HMM TIGR01017; 30S ribosomal protein S4 1105927 rpsD 12610838 rpsD Staphylococcus pseudintermedius ED99 30S ribosomal protein S4 YP_006015191.1 1105325 R 984892 CDS YP_006015192.1 386319029 12610839 complement(1106162..1106617) 1 NC_017568.1 identified by match to protein family HMM PF01590; GAF domain-containing protein 1106617 12610839 SPSE_1080 Staphylococcus pseudintermedius ED99 GAF domain-containing protein YP_006015192.1 1106162 R 984892 CDS YP_006015193.1 386319030 12610840 1106800..1108500 1 NC_017568.1 identified by match to protein family HMM PF06160; septation ring formation regulator EzrA 1108500 ezrA 12610840 ezrA Staphylococcus pseudintermedius ED99 septation ring formation regulator EzrA YP_006015193.1 1106800 D 984892 CDS YP_006015194.1 386319031 12610841 1108698..1110017 1 NC_017568.1 identified by match to protein family HMM PF01610; transposase for ISSps1 1110017 12610841 SPSE_1082 Staphylococcus pseudintermedius ED99 transposase for ISSps1 YP_006015194.1 1108698 D 984892 CDS YP_006015195.1 386319032 12610842 1110217..1111353 1 NC_017568.1 identified by match to protein family HMM PF00266; class V aminotransferase 1111353 12610842 SPSE_1083 Staphylococcus pseudintermedius ED99 class V aminotransferase YP_006015195.1 1110217 D 984892 CDS YP_006015196.1 386319033 12610843 1111350..1112570 1 NC_017568.1 identified by match to protein family HMM PF02568, match to protein family HMM PF02926, match to protein family HMM PF06508, match to protein family HMM TIGR00342; thiamine biosynthesis/tRNA modification protein ThiI 1112570 thiI 12610843 thiI Staphylococcus pseudintermedius ED99 thiamine biosynthesis/tRNA modification protein ThiI YP_006015196.1 1111350 D 984892 CDS YP_006015197.1 386319034 12610844 1112586..1113359 1 NC_017568.1 identified by match to protein family HMM PF01925; membrane protein 1113359 12610844 SPSE_1085 Staphylococcus pseudintermedius ED99 membrane protein YP_006015197.1 1112586 D 984892 CDS YP_006015198.1 386319035 12610845 1113517..1114509 1 NC_017568.1 identified by match to protein family HMM PF00574, match to protein family HMM PF01343, match to protein family HMM TIGR00706; exfoliative toxin 1114509 siet 12610845 siet Staphylococcus pseudintermedius ED99 exfoliative toxin YP_006015198.1 1113517 D 984892 CDS YP_006015199.1 386319036 12610846 1114519..1115103 1 NC_017568.1 identified by match to protein family HMM PF06271; RDD family protein 1115103 12610846 SPSE_1087 Staphylococcus pseudintermedius ED99 RDD family protein YP_006015199.1 1114519 D 984892 CDS YP_006015200.1 386319037 12610847 1115167..1115661 1 NC_017568.1 identified by match to protein family HMM PF00578, match to protein family HMM PF08534; thiol peroxidase 1115661 12610847 SPSE_1088 Staphylococcus pseudintermedius ED99 thiol peroxidase YP_006015200.1 1115167 D 984892 CDS YP_006015201.1 386319038 12610848 1115866..1116816 1 NC_017568.1 adenine-specific DNA methylase 1116816 12610848 SPSE_1089 Staphylococcus pseudintermedius ED99 adenine-specific DNA methylase YP_006015201.1 1115866 D 984892 CDS YP_006015202.1 386319039 12610849 1116895..1118097 1 NC_017568.1 identified by match to protein family HMM PF00871, match to protein family HMM TIGR00016; acetate kinase 1118097 ackA 12610849 ackA Staphylococcus pseudintermedius ED99 acetate kinase YP_006015202.1 1116895 D 984892 CDS YP_006015203.1 386319040 12610850 complement(1118357..1118860) 1 NC_017568.1 identified by match to protein family HMM PF00582; universal stress protein family 1118860 12610850 SPSE_1091 Staphylococcus pseudintermedius ED99 universal stress protein family YP_006015203.1 1118357 R 984892 CDS YP_006015204.1 386319041 12610851 1119008..1120129 1 NC_017568.1 identified by match to protein family HMM PF01262, match to protein family HMM PF05222, match to protein family HMM TIGR00518; alanine dehydrogenase 2 1120129 ald2 12610851 ald2 Staphylococcus pseudintermedius ED99 alanine dehydrogenase 2 YP_006015204.1 1119008 D 984892 CDS YP_006015205.1 386319042 12610852 complement(1120222..1120857) 1 NC_017568.1 identified by match to protein family HMM PF03932; copper homeostasis protein CutC 1120857 12610852 SPSE_1093 Staphylococcus pseudintermedius ED99 copper homeostasis protein CutC YP_006015205.1 1120222 R 984892 CDS YP_006015206.1 386319043 12610853 complement(1120854..1121909) 1 NC_017568.1 identified by match to protein family HMM PF00557, match to protein family HMM PF01321; proline dipeptidase 1121909 pepQ 12610853 pepQ Staphylococcus pseudintermedius ED99 proline dipeptidase YP_006015206.1 1120854 R 984892 CDS YP_006015207.1 386319044 12610854 1122166..1122855 1 NC_017568.1 identified by match to protein family HMM PF00753; metal-dependent hydrolase 1122855 12610854 SPSE_1095 Staphylococcus pseudintermedius ED99 metal-dependent hydrolase YP_006015207.1 1122166 D 984892 CDS YP_006015208.1 386319045 12610855 complement(1123469..1123882) 1 NC_017568.1 identified by match to protein family HMM PF00582; universal stress protein family 1123882 12610855 SPSE_1096 Staphylococcus pseudintermedius ED99 universal stress protein family YP_006015208.1 1123469 R 984892 CDS YP_006015209.1 386319046 12610856 1124203..1125498 1 NC_017568.1 identified by match to protein family HMM PF00392, match to protein family HMM PF00571, match to protein family HMM PF03061, match to protein family HMM PF07085; hypothetical protein 1125498 12610856 SPSE_1097 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015209.1 1124203 D 984892 CDS YP_006015210.1 386319047 12610857 1125511..1126443 1 NC_017568.1 identified by match to protein family HMM PF01368, match to protein family HMM PF02272; DHH subfamily phosphodiesterase 1126443 12610857 SPSE_1098 Staphylococcus pseudintermedius ED99 DHH subfamily phosphodiesterase YP_006015210.1 1125511 D 984892 CDS YP_006015211.1 386319048 12610858 1126468..1129659 1 NC_017568.1 identified by match to protein family HMM PF01336, match to protein family HMM PF02811, match to protein family HMM PF07733, match to protein family HMM TIGR00594; DNA polymerase III subunit alpha 1129659 dnaE 12610858 dnaE Staphylococcus pseudintermedius ED99 DNA polymerase III subunit alpha YP_006015211.1 1126468 D 984892 CDS YP_006015212.1 386319049 12610859 1129802..1131034 1 NC_017568.1 identified by match to protein family HMM PF00390, match to protein family HMM PF03949; NAD-dependent malic enzyme 1131034 12610859 SPSE_1100 Staphylococcus pseudintermedius ED99 NAD-dependent malic enzyme YP_006015212.1 1129802 D 984892 CDS YP_006015213.1 386319050 12610860 1131079..1131939 1 NC_017568.1 identified by match to protein family HMM TIGR00515; acetyl-CoA carboxylase, carboxyl transferase subunit beta 1131939 accD 12610860 accD Staphylococcus pseudintermedius ED99 acetyl-CoA carboxylase, carboxyl transferase subunit beta YP_006015213.1 1131079 D 984892 CDS YP_006015214.1 386319051 12610861 1131939..1132883 1 NC_017568.1 identified by match to protein family HMM PF03255, match to protein family HMM TIGR00513; acetyl-CoA carboxylase, carboxyl transferase subunit alpha 1132883 accA 12610861 accA Staphylococcus pseudintermedius ED99 acetyl-CoA carboxylase, carboxyl transferase subunit alpha YP_006015214.1 1131939 D 984892 CDS YP_006015215.1 386319052 12610862 1133447..1134415 1 NC_017568.1 identified by match to protein family HMM PF00365, match to protein family HMM TIGR02482; 6-phosphofructokinase 1134415 pfkA 12610862 pfkA Staphylococcus pseudintermedius ED99 6-phosphofructokinase YP_006015215.1 1133447 D 984892 CDS YP_006015216.1 386319053 12610863 1134434..1136194 1 NC_017568.1 identified by match to protein family HMM PF00224, match to protein family HMM PF00391, match to protein family HMM PF02887, match to protein family HMM TIGR01064; pyruvate kinase 1136194 pyk 12610863 pyk Staphylococcus pseudintermedius ED99 pyruvate kinase YP_006015216.1 1134434 D 984892 CDS YP_006015217.1 386319054 12610864 1136618..1137736 1 NC_017568.1 identified by match to protein family HMM PF00285, match to protein family HMM TIGR01800; citrate synthase 1137736 gltA 12610864 gltA Staphylococcus pseudintermedius ED99 citrate synthase YP_006015217.1 1136618 D 984892 CDS YP_006015218.1 386319055 12610865 1137782..1139044 1 NC_017568.1 identified by match to protein family HMM PF00180, match to protein family HMM TIGR00183; isocitrate dehydrogenase 1139044 icd 12610865 icd Staphylococcus pseudintermedius ED99 isocitrate dehydrogenase YP_006015218.1 1137782 D 984892 CDS YP_006015219.1 386319056 12610866 1139217..1140536 1 NC_017568.1 identified by match to protein family HMM PF01610; transposase for ISSps1 1140536 12610866 SPSE_1107 Staphylococcus pseudintermedius ED99 transposase for ISSps1 YP_006015219.1 1139217 D 984892 CDS YP_006015220.1 386319057 12610867 1140855..1141559 1 NC_017568.1 identified by match to protein family HMM PF00072, match to protein family HMM PF00486; alkaline phosphatase synthesis transcriptional regulatory protein 1141559 phoP 12610867 phoP Staphylococcus pseudintermedius ED99 alkaline phosphatase synthesis transcriptional regulatory protein YP_006015220.1 1140855 D 984892 CDS YP_006015221.1 386319058 12610868 1141560..1143260 1 NC_017568.1 identified by match to protein family HMM PF00512, match to protein family HMM PF00672, match to protein family HMM PF00989, match to protein family HMM PF02518, match to protein family HMM TIGR00229; alkaline phosphatase synthesis sensor protein PhoR 1143260 phoR 12610868 phoR Staphylococcus pseudintermedius ED99 alkaline phosphatase synthesis sensor protein PhoR YP_006015221.1 1141560 D 984892 CDS YP_006015222.1 386319059 12610869 1143991..1146618 1 NC_017568.1 identified by match to protein family HMM PF00476, match to protein family HMM PF01367, match to protein family HMM PF02739, match to protein family HMM TIGR00593; DNA polymerase I 1146618 polA 12610869 polA Staphylococcus pseudintermedius ED99 DNA polymerase I YP_006015222.1 1143991 D 984892 CDS YP_006015223.1 386319060 12610870 1146638..1147510 1 NC_017568.1 identified by match to protein family HMM PF01149, match to protein family HMM PF06831, match to protein family HMM TIGR00577; formamidopyrimidine-DNA glycosylase 1147510 mutM 12610870 mutM Staphylococcus pseudintermedius ED99 formamidopyrimidine-DNA glycosylase YP_006015223.1 1146638 D 984892 CDS YP_006015224.1 386319061 12610871 1147524..1148147 1 NC_017568.1 identified by match to protein family HMM PF01121, match to protein family HMM TIGR00152; dephospho-CoA kinase 1148147 coaE 12610871 coaE Staphylococcus pseudintermedius ED99 dephospho-CoA kinase YP_006015224.1 1147524 D 984892 CDS YP_006015225.1 386319062 12610872 1148354..1149370 1 NC_017568.1 identified by match to protein family HMM PF00044, match to protein family HMM PF02800, match to protein family HMM TIGR01534; glyceraldehyde-3-phosphate dehydrogenase 1149370 gapB 12610872 gapB Staphylococcus pseudintermedius ED99 glyceraldehyde-3-phosphate dehydrogenase YP_006015225.1 1148354 D 984892 CDS YP_006015226.1 386319063 12610873 1149567..1150034 1 NC_017568.1 identified by match to protein family HMM PF03477, match to protein family HMM TIGR00244; transcriptional regulator NrdR 1150034 nrdR 12610873 nrdR Staphylococcus pseudintermedius ED99 transcriptional regulator NrdR YP_006015226.1 1149567 D 984892 CDS YP_006015227.1 386319064 12610874 1150038..1151411 1 NC_017568.1 identified by match to protein family HMM PF07261; chromosome replication initiation/membrane attachment protein 1151411 12610874 SPSE_1115 Staphylococcus pseudintermedius ED99 chromosome replication initiation/membrane attachment protein YP_006015227.1 1150038 D 984892 CDS YP_006015228.1 386319065 12610875 1151411..1152334 1 NC_017568.1 identified by match to protein family HMM PF07319; primosomal protein DnaI 1152334 dnaI 12610875 dnaI Staphylococcus pseudintermedius ED99 primosomal protein DnaI YP_006015228.1 1151411 D 984892 CDS YP_006015229.1 386319066 12610876 1152652..1154589 1 NC_017568.1 identified by match to protein family HMM PF00587, match to protein family HMM PF02824, match to protein family HMM PF03129, match to protein family HMM PF07973, match to protein family HMM TIGR00418; threonyl-tRNA synthetase 1154589 thrS 12610876 thrS Staphylococcus pseudintermedius ED99 threonyl-tRNA synthetase YP_006015229.1 1152652 D 984892 CDS YP_006015230.1 386319067 12610877 1154957..1156465 1 NC_017568.1 identified by match to protein family HMM PF00324; lysine-specific permease 1156465 12610877 SPSE_1119 Staphylococcus pseudintermedius ED99 lysine-specific permease YP_006015230.1 1154957 D 984892 CDS YP_006015231.1 386319068 12610878 1156482..1156619 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1156619 12610878 SPSE_1120 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015231.1 1156482 D 984892 CDS YP_006015232.1 386319069 12610879 1156668..1157195 1 NC_017568.1 identified by match to protein family HMM PF00707, match to protein family HMM PF05198, match to protein family HMM TIGR00168; translation initiation factor IF-3 1157195 infC 12610879 infC Staphylococcus pseudintermedius ED99 translation initiation factor IF-3 YP_006015232.1 1156668 D 984892 CDS YP_006015233.1 386319070 12610880 1157221..1157421 1 NC_017568.1 identified by match to protein family HMM PF01632, match to protein family HMM TIGR00001; 50S ribosomal protein L35 1157421 rpmI 12610880 rpmI Staphylococcus pseudintermedius ED99 50S ribosomal protein L35 YP_006015233.1 1157221 D 984892 CDS YP_006015234.1 386319071 12610881 1157496..1157852 1 NC_017568.1 identified by match to protein family HMM PF00453, match to protein family HMM TIGR01032; 50S ribosomal protein L20 1157852 rplT 12610881 rplT Staphylococcus pseudintermedius ED99 50S ribosomal protein L20 YP_006015234.1 1157496 D 984892 CDS YP_006015235.1 386319072 12610882 1157962..1158573 1 NC_017568.1 identified by match to protein family HMM PF00293; MutT/nudix family protein 1158573 12610882 SPSE_1125 Staphylococcus pseudintermedius ED99 MutT/nudix family protein YP_006015235.1 1157962 D 984892 CDS YP_006015236.1 386319073 12610883 1158583..1159506 1 NC_017568.1 hypothetical protein 1159506 12610883 SPSE_1126 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015236.1 1158583 D 984892 CDS YP_006015237.1 386319074 12610884 1159594..1160910 1 NC_017568.1 identified by match to protein family HMM PF00254, match to protein family HMM PF05697, match to protein family HMM PF05698, match to protein family HMM TIGR00115; trigger factor 1160910 tig 12610884 tig Staphylococcus pseudintermedius ED99 trigger factor YP_006015237.1 1159594 D 984892 CDS YP_006015238.1 386319075 12610885 1161483..1162745 1 NC_017568.1 identified by match to protein family HMM PF00004, match to protein family HMM PF06689, match to protein family HMM PF07724, match to protein family HMM TIGR00382; ATP-dependent Clp protease ATP-binding subunit ClpX 1162745 clpX 12610885 clpX Staphylococcus pseudintermedius ED99 ATP-dependent Clp protease ATP-binding subunit ClpX YP_006015238.1 1161483 D 984892 CDS YP_006015239.1 386319076 12610886 1162982..1163578 1 NC_017568.1 identified by match to protein family HMM PF01926, match to protein family HMM TIGR00231, match to protein family HMM TIGR03598; GTP-binding protein EngB 1163578 engB 12610886 engB Staphylococcus pseudintermedius ED99 GTP-binding protein EngB YP_006015239.1 1162982 D 984892 CDS YP_006015240.1 386319077 12610887 1163733..1165073 1 NC_017568.1 identified by match to protein family HMM PF00745, match to protein family HMM PF01488, match to protein family HMM PF05201, match to protein family HMM TIGR01035; glutamyl-tRNA reductase 1165073 hemA 12610887 hemA Staphylococcus pseudintermedius ED99 glutamyl-tRNA reductase YP_006015240.1 1163733 D 984892 CDS YP_006015241.1 386319078 12610888 1165088..1165924 1 NC_017568.1 identified by match to protein family HMM PF01578; HemA concentration negative effector 1165924 hemX 12610888 hemX Staphylococcus pseudintermedius ED99 HemA concentration negative effector YP_006015241.1 1165088 D 984892 CDS YP_006015242.1 386319079 12610889 1165950..1166879 1 NC_017568.1 identified by match to protein family HMM PF01379, match to protein family HMM PF03900, match to protein family HMM TIGR00212; porphobilinogen deaminase 1166879 hemC 12610889 hemC Staphylococcus pseudintermedius ED99 porphobilinogen deaminase YP_006015242.1 1165950 D 984892 CDS YP_006015243.1 386319080 12610890 1166883..1167560 1 NC_017568.1 identified by match to protein family HMM PF02602; uroporphyrinogen-III synthase 1167560 hemD 12610890 hemD Staphylococcus pseudintermedius ED99 uroporphyrinogen-III synthase YP_006015243.1 1166883 D 984892 CDS YP_006015244.1 386319081 12610891 1167560..1168537 1 NC_017568.1 identified by match to protein family HMM PF00490; delta-aminolevulinic acid dehydratase 1168537 hemB 12610891 hemB Staphylococcus pseudintermedius ED99 delta-aminolevulinic acid dehydratase YP_006015244.1 1167560 D 984892 CDS YP_006015245.1 386319082 12610892 1168553..1169839 1 NC_017568.1 identified by match to protein family HMM PF00202, match to protein family HMM TIGR00713; glutamate-1-semialdehyde-2,1-aminomutase 1169839 hemL1 12610892 hemL1 Staphylococcus pseudintermedius ED99 glutamate-1-semialdehyde-2,1-aminomutase YP_006015245.1 1168553 D 984892 CDS YP_006015246.1 386319083 12610893 1170021..1171340 1 NC_017568.1 identified by match to protein family HMM PF01610; transposase for ISSps1 1171340 12610893 SPSE_1136 Staphylococcus pseudintermedius ED99 transposase for ISSps1 YP_006015246.1 1170021 D 984892 CDS YP_006015247.1 386319084 12610894 1171589..1172671 1 NC_017568.1 identified by match to protein family HMM PF05145, match to protein family HMM TIGR03082; ammonia monooxygenase 1172671 12610894 SPSE_1137 Staphylococcus pseudintermedius ED99 ammonia monooxygenase YP_006015247.1 1171589 D 984892 CDS YP_006015248.1 386319085 12610895 complement(1172756..1173304) 1 NC_017568.1 identified by match to protein family HMM PF03352; DNA-3-methyladenine glycosylase I 1173304 12610895 SPSE_1138 Staphylococcus pseudintermedius ED99 DNA-3-methyladenine glycosylase I YP_006015248.1 1172756 R 984892 CDS YP_006015249.1 386319086 12610896 1173624..1176254 1 NC_017568.1 identified by match to protein family HMM PF00133, match to protein family HMM PF08264, match to protein family HMM PF09334, match to protein family HMM TIGR00422; valyl-tRNA synthetase 1176254 valS 12610896 valS Staphylococcus pseudintermedius ED99 valyl-tRNA synthetase YP_006015249.1 1173624 D 984892 CDS YP_006015250.1 386319087 12610897 1176266..1177534 1 NC_017568.1 identified by match to protein family HMM PF02875, match to protein family HMM PF08245, match to protein family HMM TIGR01499; folylpolyglutamate synthase 1177534 folC 12610897 folC Staphylococcus pseudintermedius ED99 folylpolyglutamate synthase YP_006015250.1 1176266 D 984892 CDS YP_006015251.1 386319088 12610898 1177767..1178447 1 NC_017568.1 identified by match to protein family HMM PF01478, match to protein family HMM PF06750; type III leader peptidase family protein 1178447 12610898 SPSE_1141 Staphylococcus pseudintermedius ED99 type III leader peptidase family protein YP_006015251.1 1177767 D 984892 CDS YP_006015252.1 386319089 12610899 1178444..1178869 1 NC_017568.1 truncated DNA repair protein RadC 1178869 12610899 SPSE_1142 Staphylococcus pseudintermedius ED99 truncated DNA repair protein RadC YP_006015252.1 1178444 D 984892 CDS YP_006015253.1 386319090 12610900 1178905..1179105 1 NC_017568.1 putative cell shape determinant MreD, truncated 1179105 12610900 SPSE_1143 Staphylococcus pseudintermedius ED99 putative cell shape determinant MreD, truncated YP_006015253.1 1178905 D 984892 CDS YP_006015254.1 386319091 12610901 1179226..1179534 1 NC_017568.1 identified by match to protein family HMM PF00829, match to protein family HMM TIGR00061; 50S ribosomal protein L21 1179534 rplU 12610901 rplU Staphylococcus pseudintermedius ED99 50S ribosomal protein L21 YP_006015254.1 1179226 D 984892 CDS YP_006015255.1 386319092 12610902 1179537..1179857 1 NC_017568.1 identified by match to protein family HMM PF04327; hypothetical protein 1179857 12610902 SPSE_1146 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015255.1 1179537 D 984892 CDS YP_006015256.1 386319093 12610903 1179868..1180152 1 NC_017568.1 identified by match to protein family HMM PF01016, match to protein family HMM TIGR00062; 50S ribosomal protein L27 1180152 rpmA 12610903 rpmA Staphylococcus pseudintermedius ED99 50S ribosomal protein L27 YP_006015256.1 1179868 D 984892 CDS YP_006015257.1 386319094 12610904 1180281..1181573 1 NC_017568.1 identified by match to protein family HMM PF01018, match to protein family HMM PF01926, match to protein family HMM PF09269, match to protein family HMM TIGR00231, match to protein family HMM TIGR02729, match to protein family HMM TIGR03595; Spo0B-associated GTP-binding protein ObgE 1181573 obgE 12610904 obgE Staphylococcus pseudintermedius ED99 Spo0B-associated GTP-binding protein ObgE YP_006015257.1 1180281 D 984892 CDS YP_006015258.1 386319095 12610905 1181601..1182044 1 NC_017568.1 identified by match to protein family HMM PF01842; ACT domain-containing protein 1182044 12610905 SPSE_1149 Staphylococcus pseudintermedius ED99 ACT domain-containing protein YP_006015258.1 1181601 D 984892 CDS YP_006015259.1 386319096 12610906 1182058..1182657 1 NC_017568.1 identified by match to protein family HMM PF01330, match to protein family HMM PF07499, match to protein family HMM TIGR00084; Holliday junction DNA helicase RuvA 1182657 ruvA 12610906 ruvA Staphylococcus pseudintermedius ED99 Holliday junction DNA helicase RuvA YP_006015259.1 1182058 D 984892 CDS YP_006015260.1 386319097 12610907 1182671..1183669 1 NC_017568.1 identified by match to protein family HMM PF00004, match to protein family HMM PF05491, match to protein family HMM PF05496, match to protein family HMM PF07728, match to protein family HMM TIGR00635; Holliday junction DNA helicase RuvB 1183669 ruvB 12610907 ruvB Staphylococcus pseudintermedius ED99 Holliday junction DNA helicase RuvB YP_006015260.1 1182671 D 984892 CDS YP_006015261.1 386319098 12610908 1183687..1184712 1 NC_017568.1 identified by match to protein family HMM PF02547, match to protein family HMM TIGR00113; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 1184712 queA 12610908 queA Staphylococcus pseudintermedius ED99 S-adenosylmethionine--tRNA ribosyltransferase-isomerase YP_006015261.1 1183687 D 984892 CDS YP_006015262.1 386319099 12610909 1184730..1185869 1 NC_017568.1 identified by match to protein family HMM PF01702, match to protein family HMM TIGR00430, match to protein family HMM TIGR00449; queuine tRNA-ribosyltransferase 1185869 tgt 12610909 tgt Staphylococcus pseudintermedius ED99 queuine tRNA-ribosyltransferase YP_006015262.1 1184730 D 984892 CDS YP_006015263.1 386319100 12610910 1185886..1186149 1 NC_017568.1 identified by match to protein family HMM PF02699, match to protein family HMM TIGR00739; preprotein translocase subunit YajC 1186149 yajC 12610910 yajC Staphylococcus pseudintermedius ED99 preprotein translocase subunit YajC YP_006015263.1 1185886 D 984892 CDS YP_006015264.1 386319101 12610911 1186291..1188570 1 NC_017568.1 identified by match to protein family HMM PF02355, match to protein family HMM PF07549, match to protein family HMM TIGR00916, match to protein family HMM TIGR00966, match to protein family HMM TIGR01129; bifunctional; preprotein translocase subunit SecD/SecF 1188570 12610911 SPSE_1155 Staphylococcus pseudintermedius ED99 preprotein translocase subunit SecD/SecF YP_006015264.1 1186291 D 984892 CDS YP_006015265.1 386319102 12610912 1188687..1190972 1 NC_017568.1 identified by match to protein family HMM PF01368, match to protein family HMM PF02272, match to protein family HMM TIGR00644; single-strand DNA-specific exonuclease RecJ 1190972 recJ 12610912 recJ Staphylococcus pseudintermedius ED99 single-strand DNA-specific exonuclease RecJ YP_006015265.1 1188687 D 984892 CDS YP_006015266.1 386319103 12610913 1190984..1191502 1 NC_017568.1 identified by match to protein family HMM PF00156, match to protein family HMM TIGR01090; adenine phosphoribosyltransferase 1191502 apt 12610913 apt Staphylococcus pseudintermedius ED99 adenine phosphoribosyltransferase YP_006015266.1 1190984 D 984892 CDS YP_006015267.1 386319104 12610914 1191859..1194048 1 NC_017568.1 identified by match to protein family HMM PF01966, match to protein family HMM PF02824, match to protein family HMM PF04607, match to protein family HMM TIGR00691; GTP pyrophosphokinase 1194048 relA1 12610914 relA1 Staphylococcus pseudintermedius ED99 GTP pyrophosphokinase YP_006015267.1 1191859 D 984892 CDS YP_006015268.1 386319105 12610915 1194061..1194513 1 NC_017568.1 identified by match to protein family HMM PF02580, match to protein family HMM TIGR00256; D-tyrosyl-tRNA deacylase 1194513 dtd 12610915 dtd Staphylococcus pseudintermedius ED99 D-tyrosyl-tRNA deacylase YP_006015268.1 1194061 D 984892 CDS YP_006015269.1 386319106 12610916 1194510..1195385 1 NC_017568.1 identified by match to protein family HMM PF01520, match to protein family HMM PF08239; N-acetylmuramoyl-L-alanine amidase 1195385 lytH 12610916 lytH Staphylococcus pseudintermedius ED99 N-acetylmuramoyl-L-alanine amidase YP_006015269.1 1194510 D 984892 CDS YP_006015270.1 386319107 12610917 1195747..1197018 1 NC_017568.1 identified by match to protein family HMM PF00587, match to protein family HMM PF03129, match to protein family HMM TIGR00442; histidyl-tRNA synthetase 1197018 hisS 12610917 hisS Staphylococcus pseudintermedius ED99 histidyl-tRNA synthetase YP_006015270.1 1195747 D 984892 CDS YP_006015271.1 386319108 12610918 1197018..1198784 1 NC_017568.1 identified by match to protein family HMM PF00152, match to protein family HMM PF01336, match to protein family HMM PF02938, match to protein family HMM TIGR00459; aspartyl-tRNA synthetase 1198784 aspS 12610918 aspS Staphylococcus pseudintermedius ED99 aspartyl-tRNA synthetase YP_006015271.1 1197018 D 984892 CDS YP_006015272.1 386319109 12610920 1199130..1199897 1 NC_017568.1 identified by match to protein family HMM PF00899; ThiF family protein 1199897 12610920 SPSE_1164 Staphylococcus pseudintermedius ED99 ThiF family protein YP_006015272.1 1199130 D 984892 CDS YP_006015273.1 386319110 12610921 complement(1199965..1201236) 1 NC_017568.1 identified by match to protein family HMM PF00004, match to protein family HMM PF07728; ATPase AAA family protein 1201236 12610921 SPSE_1165 Staphylococcus pseudintermedius ED99 ATPase AAA family protein YP_006015273.1 1199965 R 984892 CDS YP_006015274.1 386319111 12610922 1201346..1201765 1 NC_017568.1 identified by match to protein family HMM PF02082, match to protein family HMM TIGR00738; transcriptional regulator 1201765 12610922 SPSE_1166 Staphylococcus pseudintermedius ED99 transcriptional regulator YP_006015274.1 1201346 D 984892 CDS YP_006015275.1 386319112 12610923 1201806..1202636 1 NC_017568.1 identified by match to protein family HMM PF00248; oxidoreductase, aldo/keto reductase family 1202636 12610923 SPSE_1167 Staphylococcus pseudintermedius ED99 oxidoreductase, aldo/keto reductase family YP_006015275.1 1201806 D 984892 CDS YP_006015276.1 386319113 12610924 1202704..1202889 1 NC_017568.1 identified by match to protein family HMM PF05532; hypothetical protein 1202889 12610924 SPSE_1168 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015276.1 1202704 D 984892 CDS YP_006015277.1 386319114 12610925 complement(1203354..1204370) 1 NC_017568.1 identified by match to protein family HMM PF00296, match to protein family HMM TIGR03558; luciferase family protein 1204370 12610925 SPSE_1169 Staphylococcus pseudintermedius ED99 luciferase family protein YP_006015277.1 1203354 R 984892 CDS YP_006015278.1 386319115 12610926 1204579..1205724 1 NC_017568.1 identified by match to protein family HMM PF00266; cysteine desulfurase 1205724 12610926 SPSE_1170 Staphylococcus pseudintermedius ED99 cysteine desulfurase YP_006015278.1 1204579 D 984892 CDS YP_006015279.1 386319116 12610927 1205724..1206836 1 NC_017568.1 identified by match to protein family HMM PF03054, match to protein family HMM TIGR00420; tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase 1206836 trmU 12610927 trmU Staphylococcus pseudintermedius ED99 tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase YP_006015279.1 1205724 D 984892 CDS YP_006015280.1 386319117 12610928 1206852..1207526 1 NC_017568.1 identified by match to protein family HMM PF00515, match to protein family HMM PF07719; TPR domain-containing protein 1207526 12610928 SPSE_1172 Staphylococcus pseudintermedius ED99 TPR domain-containing protein YP_006015280.1 1206852 D 984892 CDS YP_006015281.1 386319118 12610929 1207529..1209928 1 NC_017568.1 identified by match to protein family HMM TIGR01448; RecD/TraA family helicase 1209928 12610929 SPSE_1173 Staphylococcus pseudintermedius ED99 RecD/TraA family helicase YP_006015281.1 1207529 D 984892 CDS YP_006015282.1 386319119 12610930 1210174..1212804 1 NC_017568.1 identified by match to protein family HMM PF01411, match to protein family HMM PF02272, match to protein family HMM PF07973, match to protein family HMM TIGR00344; alanyl-tRNA synthetase 1212804 alaS 12610930 alaS Staphylococcus pseudintermedius ED99 alanyl-tRNA synthetase YP_006015282.1 1210174 D 984892 CDS YP_006015283.1 386319120 12610931 1212867..1213139 1 NC_017568.1 identified by match to protein family HMM PF06135; hypothetical protein 1213139 12610931 SPSE_1175 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015283.1 1212867 D 984892 CDS YP_006015284.1 386319121 12610932 1213132..1213560 1 NC_017568.1 identified by match to protein family HMM PF03652, match to protein family HMM TIGR00250; Holliday junction resolvase 1213560 12610932 SPSE_1176 Staphylococcus pseudintermedius ED99 Holliday junction resolvase YP_006015284.1 1213132 D 984892 CDS YP_006015285.1 386319122 12610933 1213574..1213894 1 NC_017568.1 identified by match to protein family HMM PF06949; hypothetical protein 1213894 12610933 SPSE_1177 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015285.1 1213574 D 984892 CDS YP_006015286.1 386319123 12610934 complement(1213891..1214004) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1214004 12610934 SPSE_1178 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015286.1 1213891 R 984892 CDS YP_006015287.1 386319124 12610935 1214291..1214935 1 NC_017568.1 identified by match to protein family HMM PF01596; O-methyltransferase family protein 1214935 12610935 SPSE_1179 Staphylococcus pseudintermedius ED99 O-methyltransferase family protein YP_006015287.1 1214291 D 984892 CDS YP_006015288.1 386319125 12610936 1214928..1215857 1 NC_017568.1 identified by match to protein family HMM PF01136; peptidase, U32 family 1215857 12610936 SPSE_1180 Staphylococcus pseudintermedius ED99 peptidase, U32 family YP_006015288.1 1214928 D 984892 CDS YP_006015289.1 386319126 12610937 1215876..1217141 1 NC_017568.1 identified by match to protein family HMM PF01136; peptidase, U32 family 1217141 12610937 SPSE_1181 Staphylococcus pseudintermedius ED99 peptidase, U32 family YP_006015289.1 1215876 D 984892 CDS YP_006015290.1 386319127 12610938 1217145..1217768 1 NC_017568.1 identified by match to protein family HMM PF00485, match to protein family HMM TIGR00235; uridine kinase 1217768 udk 12610938 udk Staphylococcus pseudintermedius ED99 uridine kinase YP_006015290.1 1217145 D 984892 CDS YP_006015291.1 386319128 12610939 1217795..1218271 1 NC_017568.1 identified by match to protein family HMM PF01272, match to protein family HMM PF03449, match to protein family HMM TIGR01462; transcription elongation factor GreA 1218271 greA 12610939 greA Staphylococcus pseudintermedius ED99 transcription elongation factor GreA YP_006015291.1 1217795 D 984892 CDS YP_006015292.1 386319129 12610940 1218527..1219261 1 NC_017568.1 identified by match to protein family HMM PF02682, match to protein family HMM TIGR00370; allophanate hydrolase subunit 1 1219261 12610940 SPSE_1184 Staphylococcus pseudintermedius ED99 allophanate hydrolase subunit 1 YP_006015292.1 1218527 D 984892 CDS YP_006015293.1 386319130 12610941 1219251..1220276 1 NC_017568.1 identified by match to protein family HMM PF02626, match to protein family HMM TIGR00724; allophanate hydrolase subunit 2 1220276 12610941 SPSE_1185 Staphylococcus pseudintermedius ED99 allophanate hydrolase subunit 2 YP_006015293.1 1219251 D 984892 CDS YP_006015294.1 386319131 12610942 1220267..1220713 1 NC_017568.1 identified by match to protein family HMM PF00364, match to protein family HMM TIGR00531; acetyl-CoA carboxylase, biotin carboxyl carrier protein 1220713 12610942 SPSE_1186 Staphylococcus pseudintermedius ED99 acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_006015294.1 1220267 D 984892 CDS YP_006015295.1 386319132 12610943 1220727..1222097 1 NC_017568.1 identified by match to protein family HMM PF00289, match to protein family HMM PF01071, match to protein family HMM PF02222, match to protein family HMM PF02655, match to protein family HMM PF02785, match to protein family HMM PF02786, match to prote; acetyl-CoA carboxylase, biotin carboxylase subunit 1222097 12610943 SPSE_1187 Staphylococcus pseudintermedius ED99 acetyl-CoA carboxylase, biotin carboxylase subunit YP_006015295.1 1220727 D 984892 CDS YP_006015296.1 386319133 12610944 1222087..1222845 1 NC_017568.1 identified by match to protein family HMM PF03746; LamB/YcsF family protein 1222845 12610944 SPSE_1188 Staphylococcus pseudintermedius ED99 LamB/YcsF family protein YP_006015296.1 1222087 D 984892 CDS YP_006015297.1 386319134 12610945 1222849..1224087 1 NC_017568.1 branched chain amino acids transporter 1224087 12610945 SPSE_1189 Staphylococcus pseudintermedius ED99 branched chain amino acids transporter YP_006015297.1 1222849 D 984892 CDS YP_006015298.1 386319135 12610946 1224337..1225023 1 NC_017568.1 identified by match to protein family HMM PF01048, match to protein family HMM TIGR01704; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1225023 mtnN 12610946 mtnN Staphylococcus pseudintermedius ED99 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase YP_006015298.1 1224337 D 984892 CDS YP_006015299.1 386319136 12610947 1225096..1225623 1 NC_017568.1 identified by match to protein family HMM PF09419, match to protein family HMM TIGR01662, match to protein family HMM TIGR01668; HAD superfamily (subfamily IIIA) phosphatase 1225623 12610947 SPSE_1191 Staphylococcus pseudintermedius ED99 HAD superfamily (subfamily IIIA) phosphatase YP_006015299.1 1225096 D 984892 CDS YP_006015300.1 386319137 12610948 1225624..1226724 1 NC_017568.1 identified by match to protein family HMM PF01926, match to protein family HMM TIGR03597; GTP-binding protein 1226724 12610948 SPSE_1192 Staphylococcus pseudintermedius ED99 GTP-binding protein YP_006015300.1 1225624 D 984892 CDS YP_006015301.1 386319138 12610949 1226740..1227552 1 NC_017568.1 identified by match to protein family HMM PF01488, match to protein family HMM PF08501, match to protein family HMM TIGR00507; shikimate 5-dehydrogenase 1227552 aroE 12610949 aroE Staphylococcus pseudintermedius ED99 shikimate 5-dehydrogenase YP_006015301.1 1226740 D 984892 CDS YP_006015302.1 386319139 12610950 1227563..1227856 1 NC_017568.1 identified by match to protein family HMM PF01985, match to protein family HMM TIGR00253; hypothetical protein 1227856 12610950 SPSE_1194 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015302.1 1227563 D 984892 CDS YP_006015303.1 386319140 12610951 1227859..1228440 1 NC_017568.1 identified by match to protein family HMM PF01467, match to protein family HMM TIGR00125, match to protein family HMM TIGR00482; nicotinate-nucleotide adenylyltransferase 1228440 nadD 12610951 nadD Staphylococcus pseudintermedius ED99 nicotinate-nucleotide adenylyltransferase YP_006015303.1 1227859 D 984892 CDS YP_006015304.1 386319141 12610952 1228418..1229002 1 NC_017568.1 identified by match to protein family HMM PF01966, match to protein family HMM TIGR00277, match to protein family HMM TIGR00488; hypothetical protein 1229002 12610952 SPSE_1196 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015304.1 1228418 D 984892 CDS YP_006015305.1 386319142 12610953 1229003..1229359 1 NC_017568.1 identified by match to protein family HMM PF02410, match to protein family HMM TIGR00090; iojap-like protein 1229359 12610953 SPSE_1197 Staphylococcus pseudintermedius ED99 iojap-like protein YP_006015305.1 1229003 D 984892 CDS YP_006015306.1 386319143 12610954 1229359..1230081 1 NC_017568.1 identified by match to protein family HMM PF05401, match to protein family HMM PF08241, match to protein family HMM PF08242; putative methyltransferase 1230081 12610954 SPSE_1198 Staphylococcus pseudintermedius ED99 putative methyltransferase YP_006015306.1 1229359 D 984892 CDS YP_006015307.1 386319144 12610955 1230135..1230803 1 NC_017568.1 identified by match to protein family HMM PF00633, match to protein family HMM TIGR00426; ComE operon protein 1 1230803 comEA 12610955 comEA Staphylococcus pseudintermedius ED99 ComE operon protein 1 YP_006015307.1 1230135 D 984892 CDS YP_006015308.1 386319145 12610956 1230889..1231350 1 NC_017568.1 identified by match to protein family HMM PF00383, match to protein family HMM TIGR02571; ComE operon protein 2 1231350 comEB 12610956 comEB Staphylococcus pseudintermedius ED99 ComE operon protein 2 YP_006015308.1 1230889 D 984892 CDS YP_006015309.1 386319146 12610957 1231458..1233578 1 NC_017568.1 identified by match to protein family HMM PF00753, match to protein family HMM PF03772, match to protein family HMM TIGR00360, match to protein family HMM TIGR00361; DNA internalization-related competence protein ComEC/Rec2 1233578 12610957 SPSE_1201 Staphylococcus pseudintermedius ED99 DNA internalization-related competence protein ComEC/Rec2 YP_006015309.1 1231458 D 984892 CDS YP_006015310.1 386319147 12610958 1233646..1234620 1 NC_017568.1 identified by match to protein family HMM PF06144, match to protein family HMM TIGR01128; DNA polymerase III subunit delta 1234620 holA 12610958 holA Staphylococcus pseudintermedius ED99 DNA polymerase III subunit delta YP_006015310.1 1233646 D 984892 CDS YP_006015311.1 386319148 12610959 complement(1234794..1235042) 1 NC_017568.1 identified by match to protein family HMM PF01649, match to protein family HMM TIGR00029; 30S ribosomal protein S20 1235042 rpsT 12610959 rpsT Staphylococcus pseudintermedius ED99 30S ribosomal protein S20 YP_006015311.1 1234794 R 984892 CDS YP_006015312.1 386319149 12610960 1235365..1237188 1 NC_017568.1 identified by match to protein family HMM PF00009, match to protein family HMM PF00679, match to protein family HMM PF03144, match to protein family HMM PF06421, match to protein family HMM TIGR00231, match to protein family HMM TIGR01393; GTP-binding protein LepA 1237188 lepA 12610960 lepA Staphylococcus pseudintermedius ED99 GTP-binding protein LepA YP_006015312.1 1235365 D 984892 CDS YP_006015313.1 386319150 12610961 1237256..1238377 1 NC_017568.1 identified by match to protein family HMM PF04055, match to protein family HMM PF06969, match to protein family HMM TIGR00539; oxygen-independent coproporphyrinogen III oxidase 1238377 hemN 12610961 hemN Staphylococcus pseudintermedius ED99 oxygen-independent coproporphyrinogen III oxidase YP_006015313.1 1237256 D 984892 CDS YP_006015314.1 386319151 12610962 1238480..1239469 1 NC_017568.1 identified by match to protein family HMM PF01628, match to protein family HMM TIGR00331; heat-inducible transcription repressor HrcA 1239469 hrcA 12610962 hrcA Staphylococcus pseudintermedius ED99 heat-inducible transcription repressor HrcA YP_006015314.1 1238480 D 984892 CDS YP_006015315.1 386319152 12610963 1239484..1240125 1 NC_017568.1 identified by match to protein family HMM PF01025; co-chaperone GrpE 1240125 grpE 12610963 grpE Staphylococcus pseudintermedius ED99 co-chaperone GrpE YP_006015315.1 1239484 D 984892 CDS YP_006015316.1 386319153 12610964 1240189..1242021 1 NC_017568.1 identified by match to protein family HMM PF00012, match to protein family HMM TIGR02350; chaperone protein DnaK 1242021 dnaK 12610964 dnaK Staphylococcus pseudintermedius ED99 chaperone protein DnaK YP_006015316.1 1240189 D 984892 CDS YP_006015317.1 386319154 12610965 1242131..1243264 1 NC_017568.1 identified by match to protein family HMM PF00226, match to protein family HMM PF00684, match to protein family HMM PF01556, match to protein family HMM TIGR02349; chaperone protein DnaJ 1243264 dnaJ 12610965 dnaJ Staphylococcus pseudintermedius ED99 chaperone protein DnaJ YP_006015317.1 1242131 D 984892 CDS YP_006015318.1 386319155 12610966 1243268..1244200 1 NC_017568.1 identified by match to protein family HMM PF05175, match to protein family HMM PF06325, match to protein family HMM PF08242, match to protein family HMM TIGR00406; 50S ribosomal protein L11 methyltransferase 1244200 prmA 12610966 prmA Staphylococcus pseudintermedius ED99 50S ribosomal protein L11 methyltransferase YP_006015318.1 1243268 D 984892 CDS YP_006015319.1 386319156 12610967 1244202..1244954 1 NC_017568.1 identified by match to protein family HMM PF04452, match to protein family HMM TIGR00046; ribosomal RNA small subunit methyltransferase E 1244954 12610967 SPSE_1211 Staphylococcus pseudintermedius ED99 ribosomal RNA small subunit methyltransferase E YP_006015319.1 1244202 D 984892 CDS YP_006015320.1 386319157 12610968 1244959..1246308 1 NC_017568.1 identified by match to protein family HMM PF00919, match to protein family HMM PF04055, match to protein family HMM TIGR00089, match to protein family HMM TIGR01579; hypothetical protein 1246308 12610968 SPSE_1212 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015320.1 1244959 D 984892 CDS YP_006015321.1 386319158 12610969 1246517..1246693 1 NC_017568.1 identified by match to protein family HMM PF01165, match to protein family HMM TIGR00030; 30S ribosomal protein S21 1246693 rpsU 12610969 rpsU Staphylococcus pseudintermedius ED99 30S ribosomal protein S21 YP_006015321.1 1246517 D 984892 CDS YP_006015322.1 386319159 12610970 1246999..1247592 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1247592 12610970 SPSE_1214 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015322.1 1246999 D 984892 CDS YP_006015323.1 386319160 12610971 1247977..1248627 1 NC_017568.1 identified by match to protein family HMM PF01957; hypothetical protein 1248627 12610971 SPSE_1215 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015323.1 1247977 D 984892 CDS YP_006015324.1 386319161 12610972 1248646..1249641 1 NC_017568.1 hypothetical protein 1249641 12610972 SPSE_1216 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015324.1 1248646 D 984892 CDS YP_006015325.1 386319162 12610973 1249655..1250269 1 NC_017568.1 hypothetical protein 1250269 12610973 SPSE_1217 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015325.1 1249655 D 984892 CDS YP_006015326.1 386319163 12610974 1250620..1251564 1 NC_017568.1 identified by match to protein family HMM PF02562; phosphate starvation-inducible protein PhoH 1251564 phoH 12610974 phoH Staphylococcus pseudintermedius ED99 phosphate starvation-inducible protein PhoH YP_006015326.1 1250620 D 984892 CDS YP_006015327.1 386319164 12610975 1251568..1252029 1 NC_017568.1 identified by match to protein family HMM PF02130, match to protein family HMM TIGR00043; hypothetical protein 1252029 12610975 SPSE_1219 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015327.1 1251568 D 984892 CDS YP_006015328.1 386319165 12610976 1252029..1252376 1 NC_017568.1 identified by match to protein family HMM PF01219; diacylglycerol kinase 1252376 dgkA 12610976 dgkA Staphylococcus pseudintermedius ED99 diacylglycerol kinase YP_006015328.1 1252029 D 984892 CDS YP_006015329.1 386319166 12610977 1252392..1252799 1 NC_017568.1 identified by match to protein family HMM PF00383, match to protein family HMM TIGR01354; cytidine deaminase 1252799 cdd 12610977 cdd Staphylococcus pseudintermedius ED99 cytidine deaminase YP_006015329.1 1252392 D 984892 CDS YP_006015330.1 386319167 12610978 1252796..1253692 1 NC_017568.1 identified by match to protein family HMM PF01926, match to protein family HMM PF07650, match to protein family HMM PF08477, match to protein family HMM TIGR00231, match to protein family HMM TIGR00436; GTP-binding protein Era 1253692 era 12610978 era Staphylococcus pseudintermedius ED99 GTP-binding protein Era YP_006015330.1 1252796 D 984892 CDS YP_006015331.1 386319168 12610979 1253717..1254487 1 NC_017568.1 identified by match to protein family HMM PF02565, match to protein family HMM TIGR00613; DNA repair protein RecO 1254487 recO 12610979 recO Staphylococcus pseudintermedius ED99 DNA repair protein RecO YP_006015331.1 1253717 D 984892 CDS YP_006015332.1 386319169 12610980 complement(1254703..1256097) 1 NC_017568.1 identified by match to protein family HMM PF00587, match to protein family HMM PF03129, match to protein family HMM TIGR00389; glycyl-tRNA synthetase 1256097 glyS 12610980 glyS Staphylococcus pseudintermedius ED99 glycyl-tRNA synthetase YP_006015332.1 1254703 R 984892 CDS YP_006015333.1 386319170 12610981 1256724..1257212 1 NC_017568.1 identified by match to protein family HMM PF00571; hypothetical protein 1257212 12610981 SPSE_1225 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015333.1 1256724 D 984892 CDS YP_006015334.1 386319171 12610982 1257227..1258054 1 NC_017568.1 identified by match to protein family HMM PF03618; putative phosphotransferase 1258054 12610982 SPSE_1226 Staphylococcus pseudintermedius ED99 putative phosphotransferase YP_006015334.1 1257227 D 984892 CDS YP_006015335.1 386319172 12610983 1258127..1259914 1 NC_017568.1 identified by match to protein family HMM PF01751, match to protein family HMM PF01807, match to protein family HMM PF08275, match to protein family HMM TIGR01391; DNA primase 1259914 dnaG 12610983 dnaG Staphylococcus pseudintermedius ED99 DNA primase YP_006015335.1 1258127 D 984892 CDS YP_006015336.1 386319173 12610984 1259932..1261041 1 NC_017568.1 identified by match to protein family HMM PF00140, match to protein family HMM PF03979, match to protein family HMM PF04539, match to protein family HMM PF04542, match to protein family HMM PF04545, match to protein family HMM PF04967, match to prote; RNA polymerase sigma factor SigA 1261041 sigA 12610984 sigA Staphylococcus pseudintermedius ED99 RNA polymerase sigma factor SigA YP_006015336.1 1259932 D 984892 CDS YP_006015337.1 386319174 12610985 1261557..1262234 1 NC_017568.1 identified by match to protein family HMM PF04816; hypothetical protein 1262234 12610985 SPSE_1229 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015337.1 1261557 D 984892 CDS YP_006015338.1 386319175 12610986 1262231..1263334 1 NC_017568.1 identified by match to protein family HMM PF01784, match to protein family HMM TIGR00486; hypothetical protein 1263334 12610986 SPSE_1230 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015338.1 1262231 D 984892 CDS YP_006015339.1 386319176 12610987 complement(1263488..1264456) 1 NC_017568.1 identified by match to protein family HMM PF02401, match to protein family HMM TIGR00216; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1264456 ispH 12610987 ispH Staphylococcus pseudintermedius ED99 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_006015339.1 1263488 R 984892 CDS YP_006015340.1 386319177 12610988 1264637..1265971 1 NC_017568.1 identified by match to protein family HMM PF00270, match to protein family HMM PF00271; ATP-dependent RNA helicase 1265971 12610988 SPSE_1232 Staphylococcus pseudintermedius ED99 ATP-dependent RNA helicase YP_006015340.1 1264637 D 984892 CDS YP_006015341.1 386319178 12610989 1265996..1266889 1 NC_017568.1 identified by match to protein family HMM PF01261, match to protein family HMM TIGR00587; endonuclease IV 1266889 nfo 12610989 nfo Staphylococcus pseudintermedius ED99 endonuclease IV YP_006015341.1 1265996 D 984892 CDS YP_006015342.1 386319179 12610990 1267074..1267844 1 NC_017568.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1267844 12610990 SPSE_1234 Staphylococcus pseudintermedius ED99 ABC transporter ATP-binding protein YP_006015342.1 1267074 D 984892 CDS YP_006015343.1 386319180 12610991 1267841..1268728 1 NC_017568.1 identified by match to protein family HMM PF00950; ABC transporter permease 1268728 12610991 SPSE_1235 Staphylococcus pseudintermedius ED99 ABC transporter permease YP_006015343.1 1267841 D 984892 CDS YP_006015344.1 386319181 12610992 1268691..1269098 1 NC_017568.1 identified by match to protein family HMM PF01475; zinc-specific metalloregulatory protein 1269098 12610992 SPSE_1236 Staphylococcus pseudintermedius ED99 zinc-specific metalloregulatory protein YP_006015344.1 1268691 D 984892 CDS YP_006015345.1 386319182 12610993 complement(1269372..1270478) 1 NC_017568.1 identified by match to protein family HMM PF04551, match to protein family HMM TIGR00612; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 1270478 ispG 12610993 ispG Staphylococcus pseudintermedius ED99 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase YP_006015345.1 1269372 R 984892 CDS YP_006015346.1 386319183 12610994 1270589..1270708 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1270708 12610994 SPSE_1238 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015346.1 1270589 D 984892 CDS YP_006015347.1 386319184 12610995 1270825..1271424 1 NC_017568.1 identified by match to protein family HMM PF00081, match to protein family HMM PF02777; superoxide dismutase 1271424 sodA 12610995 sodA Staphylococcus pseudintermedius ED99 superoxide dismutase YP_006015347.1 1270825 D 984892 CDS YP_006015348.1 386319185 12610996 1271717..1273756 1 NC_017568.1 identified by match to protein family HMM PF00905, match to protein family HMM PF03717; penicillin-binding protein 3 1273756 pbp3 12610996 pbp3 Staphylococcus pseudintermedius ED99 penicillin-binding protein 3 YP_006015348.1 1271717 D 984892 CDS YP_006015349.1 386319186 12610997 1274025..1274984 1 NC_017568.1 identified by match to protein family HMM PF01547, match to protein family HMM TIGR02136; phosphate binding protein 1274984 pstS 12610997 pstS Staphylococcus pseudintermedius ED99 phosphate binding protein YP_006015349.1 1274025 D 984892 CDS YP_006015350.1 386319187 12610998 1275102..1276028 1 NC_017568.1 identified by match to protein family HMM PF00528; phosphate ABC transporter permease PstC 1276028 pstC 12610998 pstC Staphylococcus pseudintermedius ED99 phosphate ABC transporter permease PstC YP_006015350.1 1275102 D 984892 CDS YP_006015351.1 386319188 12610999 1276028..1276909 1 NC_017568.1 identified by match to protein family HMM PF00528, match to protein family HMM TIGR00974; phosphate ABC transporter permease PstA 1276909 pstA 12610999 pstA Staphylococcus pseudintermedius ED99 phosphate ABC transporter permease PstA YP_006015351.1 1276028 D 984892 CDS YP_006015352.1 386319189 12611000 1276927..1277769 1 NC_017568.1 identified by match to protein family HMM PF00005, match to protein family HMM TIGR00972; phosphate ABC transporter ATP-binding protein 1277769 pstB 12611000 pstB Staphylococcus pseudintermedius ED99 phosphate ABC transporter ATP-binding protein YP_006015352.1 1276927 D 984892 CDS YP_006015353.1 386319190 12611001 1277771..1278421 1 NC_017568.1 identified by match to protein family HMM PF01895, match to protein family HMM TIGR02135; phosphate transport system regulatory protein PhoU 1278421 phoU 12611001 phoU Staphylococcus pseudintermedius ED99 phosphate transport system regulatory protein PhoU YP_006015353.1 1277771 D 984892 CDS YP_006015354.1 386319191 12611002 1278493..1278642 1 NC_017568.1 identified by match to protein family HMM PF00471, match to protein family HMM TIGR01023; 50S ribosomal protein L33 1278642 rpmG 12611002 rpmG Staphylococcus pseudintermedius ED99 50S ribosomal protein L33 YP_006015354.1 1278493 D 984892 CDS YP_006015355.1 386319192 12611003 1278794..1279333 1 NC_017568.1 identified by match to protein family HMM PF01812, match to protein family HMM TIGR02727; 5-formyltetrahydrofolate cyclo-ligase 1279333 nanA 12611003 nanA Staphylococcus pseudintermedius ED99 5-formyltetrahydrofolate cyclo-ligase YP_006015355.1 1278794 D 984892 CDS YP_006015356.1 386319193 12611004 1279352..1280791 1 NC_017568.1 identified by match to protein family HMM PF01694, match to protein family HMM PF07719; rhomboid family protein 1280791 12611004 SPSE_1248 Staphylococcus pseudintermedius ED99 rhomboid family protein YP_006015356.1 1279352 D 984892 CDS YP_006015357.1 386319194 12611005 1280793..1280996 1 NC_017568.1 identified by match to protein family HMM PF06014; hypothetical protein 1280996 12611005 SPSE_1249 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015357.1 1280793 D 984892 CDS YP_006015358.1 386319195 12611006 1280993..1281979 1 NC_017568.1 identified by match to protein family HMM PF00480, match to protein family HMM TIGR00744; glucokinase 1281979 glk 12611006 glk Staphylococcus pseudintermedius ED99 glucokinase YP_006015358.1 1280993 D 984892 CDS YP_006015359.1 386319196 12611007 1281980..1282291 1 NC_017568.1 identified by match to protein family HMM PF01910, match to protein family HMM TIGR00106; hypothetical protein 1282291 12611007 SPSE_1251 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015359.1 1281980 D 984892 CDS YP_006015360.1 386319197 12611008 1282304..1282933 1 NC_017568.1 identified by match to protein family HMM PF00753; metallo-beta-lactamase superfamily protein 1282933 12611008 SPSE_1252 Staphylococcus pseudintermedius ED99 metallo-beta-lactamase superfamily protein YP_006015360.1 1282304 D 984892 CDS YP_006015361.1 386319198 12611009 1283094..1284068 1 NC_017568.1 identified by match to protein family HMM PF00437; competence protein ComGA 1284068 12611009 SPSE_1253 Staphylococcus pseudintermedius ED99 competence protein ComGA YP_006015361.1 1283094 D 984892 CDS YP_006015362.1 386319199 12611010 1284037..1285104 1 NC_017568.1 identified by match to protein family HMM PF00482; DNA transport machinery protein comGB 1285104 12611010 SPSE_1254 Staphylococcus pseudintermedius ED99 DNA transport machinery protein comGB YP_006015362.1 1284037 D 984892 CDS YP_006015363.1 386319200 12611011 1285117..1285440 1 NC_017568.1 identified by match to protein family HMM PF07963, match to protein family HMM TIGR02532; exogenous DNA-binding protein comGC 1285440 12611011 SPSE_1255 Staphylococcus pseudintermedius ED99 exogenous DNA-binding protein comGC YP_006015363.1 1285117 D 984892 CDS YP_006015364.1 386319201 12611012 1285418..1285858 1 NC_017568.1 identified by match to protein family HMM PF07963, match to protein family HMM TIGR02532; competence protein ComGD 1285858 12611012 SPSE_1256 Staphylococcus pseudintermedius ED99 competence protein ComGD YP_006015364.1 1285418 D 984892 CDS YP_006015365.1 386319202 12611013 1285930..1286163 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1286163 12611013 SPSE_1257 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015365.1 1285930 D 984892 CDS YP_006015366.1 386319203 12611014 1286189..1286554 1 NC_017568.1 hypothetical protein 1286554 12611014 SPSE_1258 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015366.1 1286189 D 984892 CDS YP_006015367.1 386319204 12611015 1286718..1287245 1 NC_017568.1 identified by match to protein family HMM PF01202; shikimate kinase 1287245 aroK 12611015 aroK Staphylococcus pseudintermedius ED99 shikimate kinase YP_006015367.1 1286718 D 984892 CDS YP_006015368.1 386319205 12611016 1287403..1288494 1 NC_017568.1 identified by match to protein family HMM PF01571, match to protein family HMM PF08669, match to protein family HMM TIGR00528; glycine cleavage system T protein 1288494 gcvT 12611016 gcvT Staphylococcus pseudintermedius ED99 glycine cleavage system T protein YP_006015368.1 1287403 D 984892 CDS YP_006015369.1 386319206 12611017 1288507..1289856 1 NC_017568.1 identified by match to protein family HMM PF02347; glycine dehydrogenase subunit 1 1289856 gcvPA 12611017 gcvPA Staphylococcus pseudintermedius ED99 glycine dehydrogenase subunit 1 YP_006015369.1 1288507 D 984892 CDS YP_006015370.1 386319207 12611018 1289846..1291318 1 NC_017568.1 identified by match to protein family HMM PF02347; glycine dehydrogenase subunit 2 1291318 gcvPB 12611018 gcvPB Staphylococcus pseudintermedius ED99 glycine dehydrogenase subunit 2 YP_006015370.1 1289846 D 984892 CDS YP_006015371.1 386319208 12611019 complement(1291674..1292060) 1 NC_017568.1 identified by match to protein family HMM PF00581; rhodanese-like domain-containing protein 1292060 12611019 SPSE_1264 Staphylococcus pseudintermedius ED99 rhodanese-like domain-containing protein YP_006015371.1 1291674 R 984892 CDS YP_006015372.1 386319209 12611020 1292211..1293041 1 NC_017568.1 identified by match to protein family HMM PF03099; lipoate-protein ligase A family protein 1293041 12611020 SPSE_1265 Staphylococcus pseudintermedius ED99 lipoate-protein ligase A family protein YP_006015372.1 1292211 D 984892 CDS YP_006015373.1 386319210 12611021 complement(1293157..1293381) 1 NC_017568.1 hypothetical protein 1293381 12611021 SPSE_1266 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015373.1 1293157 R 984892 CDS YP_006015374.1 386319211 12611022 complement(1293402..1294001) 1 NC_017568.1 lipoprotein 1294001 12611022 SPSE_1267 Staphylococcus pseudintermedius ED99 lipoprotein YP_006015374.1 1293402 R 984892 CDS YP_006015375.1 386319212 12611023 1294096..1295166 1 NC_017568.1 identified by match to protein family HMM PF00557, match to protein family HMM PF01321; proline dipeptidase 1295166 pepP 12611023 pepP Staphylococcus pseudintermedius ED99 proline dipeptidase YP_006015375.1 1294096 D 984892 CDS YP_006015376.1 386319213 12611024 1295185..1295742 1 NC_017568.1 identified by match to protein family HMM PF01132, match to protein family HMM PF08207, match to protein family HMM PF09285, match to protein family HMM TIGR00038; translation elongation factor P 1295742 efp 12611024 efp Staphylococcus pseudintermedius ED99 translation elongation factor P YP_006015376.1 1295185 D 984892 CDS YP_006015377.1 386319214 12611025 1296075..1296536 1 NC_017568.1 identified by match to protein family HMM PF00364, match to protein family HMM TIGR00531; acetyl-CoA carboxylase, biotin carboxyl carrier protein 1296536 accB 12611025 accB Staphylococcus pseudintermedius ED99 acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_006015377.1 1296075 D 984892 CDS YP_006015378.1 386319215 12611026 1296538..1297893 1 NC_017568.1 identified by match to protein family HMM PF00289, match to protein family HMM PF02785, match to protein family HMM PF02786, match to protein family HMM PF08443, match to protein family HMM TIGR00514; acetyl-CoA carboxylase, biotin carboxylase subunit 1297893 accC 12611026 accC Staphylococcus pseudintermedius ED99 acetyl-CoA carboxylase, biotin carboxylase subunit YP_006015378.1 1296538 D 984892 CDS YP_006015379.1 386319216 12611027 1297914..1298288 1 NC_017568.1 identified by match to protein family HMM PF03780; hypothetical protein 1298288 12611027 SPSE_1272 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015379.1 1297914 D 984892 CDS YP_006015380.1 386319217 12611028 1298309..1298701 1 NC_017568.1 identified by match to protein family HMM PF01029, match to protein family HMM TIGR01951; transcription antitermination factor NusB 1298701 nusB 12611028 nusB Staphylococcus pseudintermedius ED99 transcription antitermination factor NusB YP_006015380.1 1298309 D 984892 CDS YP_006015381.1 386319218 12611029 1298710..1300056 1 NC_017568.1 identified by match to protein family HMM PF01336, match to protein family HMM PF02601, match to protein family HMM TIGR00237; exodeoxyribonuclease VII large subunit 1300056 xseA 12611029 xseA Staphylococcus pseudintermedius ED99 exodeoxyribonuclease VII large subunit YP_006015381.1 1298710 D 984892 CDS YP_006015382.1 386319219 12611030 1300040..1300264 1 NC_017568.1 identified by match to protein family HMM PF02609, match to protein family HMM TIGR01280; exodeoxyribonuclease VII small subunit 1300264 xseB 12611030 xseB Staphylococcus pseudintermedius ED99 exodeoxyribonuclease VII small subunit YP_006015382.1 1300040 D 984892 CDS YP_006015383.1 386319220 12611031 1300236..1301126 1 NC_017568.1 identified by match to protein family HMM PF00348; geranyltranstransferase 1301126 ispA 12611031 ispA Staphylococcus pseudintermedius ED99 geranyltranstransferase YP_006015383.1 1300236 D 984892 CDS YP_006015384.1 386319221 12611032 1301196..1303064 1 NC_017568.1 identified by match to protein family HMM PF02779, match to protein family HMM PF02780, match to protein family HMM TIGR00204; 1-deoxy-D-xylulose-5-phosphate synthase 1303064 dxs 12611032 dxs Staphylococcus pseudintermedius ED99 1-deoxy-D-xylulose-5-phosphate synthase YP_006015384.1 1301196 D 984892 CDS YP_006015385.1 386319222 12611033 1303349..1303801 1 NC_017568.1 identified by match to protein family HMM PF01316, match to protein family HMM PF02863, match to protein family HMM TIGR01529; arginine repressor 1303801 argR 12611033 argR Staphylococcus pseudintermedius ED99 arginine repressor YP_006015385.1 1303349 D 984892 CDS YP_006015386.1 386319223 12611034 1303815..1305497 1 NC_017568.1 identified by match to protein family HMM PF02463, match to protein family HMM TIGR00634; DNA repair protein RecN 1305497 recN 12611034 recN Staphylococcus pseudintermedius ED99 DNA repair protein RecN YP_006015386.1 1303815 D 984892 CDS YP_006015387.1 386319224 12611035 1305504..1306397 1 NC_017568.1 identified by match to protein family HMM PF01515; phosphate butyryltransferase 1306397 12611035 SPSE_1280 Staphylococcus pseudintermedius ED99 phosphate butyryltransferase YP_006015387.1 1305504 D 984892 CDS YP_006015388.1 386319225 12611036 1306971..1308029 1 NC_017568.1 identified by match to protein family HMM PF00871, match to protein family HMM TIGR02707; butyrate kinase 1308029 buk 12611036 buk Staphylococcus pseudintermedius ED99 butyrate kinase YP_006015388.1 1306971 D 984892 CDS YP_006015389.1 386319226 12611037 1308040..1309458 1 NC_017568.1 identified by match to protein family HMM PF00070, match to protein family HMM PF02852, match to protein family HMM PF03486, match to protein family HMM PF07992, match to protein family HMM TIGR01350; dihydrolipoyl dehydrogenase 1309458 12611037 SPSE_1282 Staphylococcus pseudintermedius ED99 dihydrolipoyl dehydrogenase YP_006015389.1 1308040 D 984892 CDS YP_006015390.1 386319227 12611038 1309480..1310478 1 NC_017568.1 identified by match to protein family HMM PF00676; 2-oxoisovalerate dehydrogenase subunit alpha 1310478 12611038 SPSE_1283 Staphylococcus pseudintermedius ED99 2-oxoisovalerate dehydrogenase subunit alpha YP_006015390.1 1309480 D 984892 CDS YP_006015391.1 386319228 12611039 1310471..1311454 1 NC_017568.1 identified by match to protein family HMM PF02779, match to protein family HMM PF02780; 2-oxoisovalerate dehydrogenase subunit beta 1311454 12611039 SPSE_1284 Staphylococcus pseudintermedius ED99 2-oxoisovalerate dehydrogenase subunit beta YP_006015391.1 1310471 D 984892 CDS YP_006015392.1 386319229 12611040 1311467..1312741 1 NC_017568.1 identified by match to protein family HMM PF00198, match to protein family HMM PF00364, match to protein family HMM PF02817; branched-chain alpha-keto aciddehydrogenase complex lipoamide acyltransferase subunit 1312741 12611040 SPSE_1285 Staphylococcus pseudintermedius ED99 branched-chain alpha-keto aciddehydrogenase complex lipoamide acyltransferase subunit YP_006015392.1 1311467 D 984892 CDS YP_006015393.1 386319230 12611041 1312967..1313404 1 NC_017568.1 identified by match to protein family HMM PF06491; hypothetical protein 1313404 12611041 SPSE_1286 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015393.1 1312967 D 984892 CDS YP_006015394.1 386319231 12611042 1313415..1314392 1 NC_017568.1 identified by match to protein family HMM PF06081; membrane protein 1314392 12611042 SPSE_1287 Staphylococcus pseudintermedius ED99 membrane protein YP_006015394.1 1313415 D 984892 CDS YP_006015395.1 386319232 12611043 1314721..1315836 1 NC_017568.1 identified by match to protein family HMM PF01546, match to protein family HMM PF05343, match to protein family HMM PF07687, match to protein family HMM TIGR01883; peptidase T-like protein 1315836 12611043 SPSE_1288 Staphylococcus pseudintermedius ED99 peptidase T-like protein YP_006015395.1 1314721 D 984892 CDS YP_006015396.1 386319233 12611044 1315910..1317313 1 NC_017568.1 identified by match to protein family HMM PF00393, match to protein family HMM PF03446, match to protein family HMM TIGR00873; 6-phosphogluconate dehydrogenase 1317313 gnd 12611044 gnd Staphylococcus pseudintermedius ED99 6-phosphogluconate dehydrogenase YP_006015396.1 1315910 D 984892 CDS YP_006015397.1 386319234 12611046 complement(1318207..1318332) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1318332 12611046 SPSE_1292 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015397.1 1318207 R 984892 CDS YP_006015398.1 386319235 12611047 complement(1318292..1318564) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1318564 12611047 SPSE_1293 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015398.1 1318292 R 984892 CDS YP_006015399.1 386319236 12611048 complement(1318743..1319600) 1 NC_017568.1 identified by match to protein family HMM PF06445; AraC family transcriptional regulator 1319600 12611048 SPSE_1294 Staphylococcus pseudintermedius ED99 AraC family transcriptional regulator YP_006015399.1 1318743 R 984892 CDS YP_006015400.1 386319237 12611049 complement(1319741..1321225) 1 NC_017568.1 identified by match to protein family HMM PF00479, match to protein family HMM PF02781, match to protein family HMM TIGR00871; glucose-6-phosphate dehydrogenase 1321225 zwf 12611049 zwf Staphylococcus pseudintermedius ED99 glucose-6-phosphate dehydrogenase YP_006015400.1 1319741 R 984892 CDS YP_006015401.1 386319238 12611050 1321381..1322298 1 NC_017568.1 identified by match to protein family HMM TIGR02651; ribonuclease Z 1322298 rnz 12611050 rnz Staphylococcus pseudintermedius ED99 ribonuclease Z YP_006015401.1 1321381 D 984892 CDS YP_006015402.1 386319239 12611051 complement(1322423..1323238) 1 NC_017568.1 identified by match to protein family HMM PF01210, match to protein family HMM PF03807, match to protein family HMM TIGR00112; pyrroline-5-carboxylate reductase 1323238 proC 12611051 proC Staphylococcus pseudintermedius ED99 pyrroline-5-carboxylate reductase YP_006015402.1 1322423 R 984892 CDS YP_006015403.1 386319240 12611052 1323324..1324079 1 NC_017568.1 identified by match to protein family HMM PF00106, match to protein family HMM PF01370, match to protein family HMM PF08659; short-chain dehydrogenase/reductase family oxidoreductase 1324079 12611052 SPSE_1298 Staphylococcus pseudintermedius ED99 short-chain dehydrogenase/reductase family oxidoreductase YP_006015403.1 1323324 D 984892 CDS YP_006015404.1 386319241 12611053 complement(1324076..1324996) 1 NC_017568.1 identified by match to protein family HMM PF00248; putative oxidoreductase 1324996 12611053 SPSE_1299 Staphylococcus pseudintermedius ED99 putative oxidoreductase YP_006015404.1 1324076 R 984892 CDS YP_006015405.1 386319242 12611054 1325076..1325618 1 NC_017568.1 identified by match to protein family HMM PF00293; ADP-ribose pyrophosphatase 1325618 12611054 SPSE_1300 Staphylococcus pseudintermedius ED99 ADP-ribose pyrophosphatase YP_006015405.1 1325076 D 984892 CDS YP_006015406.1 386319243 12611055 1325723..1326178 1 NC_017568.1 identified by match to protein family HMM PF01475; Fur family transcriptional regulator 1326178 12611055 SPSE_1301 Staphylococcus pseudintermedius ED99 Fur family transcriptional regulator YP_006015406.1 1325723 D 984892 CDS YP_006015407.1 386319244 12611056 1326218..1327105 1 NC_017568.1 identified by match to protein family HMM PF00589, match to protein family HMM PF02899, match to protein family HMM TIGR02225; tyrosine recombinase XerD 1327105 xerD 12611056 xerD Staphylococcus pseudintermedius ED99 tyrosine recombinase XerD YP_006015407.1 1326218 D 984892 CDS YP_006015408.1 386319245 12611057 complement(1327202..1327321) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1327321 12611057 SPSE_1303 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015408.1 1327202 R 984892 CDS YP_006015409.1 386319246 12611058 complement(1327392..1327898) 1 NC_017568.1 identified by match to protein family HMM PF03745; hypothetical protein 1327898 12611058 SPSE_1304 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015409.1 1327392 R 984892 CDS YP_006015410.1 386319247 12611059 1327993..1328721 1 NC_017568.1 identified by match to protein family HMM PF02616; segregation and condensation protein A 1328721 scpA 12611059 scpA Staphylococcus pseudintermedius ED99 segregation and condensation protein A YP_006015410.1 1327993 D 984892 CDS YP_006015411.1 386319248 12611060 1328711..1329253 1 NC_017568.1 identified by match to protein family HMM PF04079, match to protein family HMM TIGR00281; segregation and condensation protein B 1329253 scpB 12611060 scpB Staphylococcus pseudintermedius ED99 segregation and condensation protein B YP_006015411.1 1328711 D 984892 CDS YP_006015412.1 386319249 12611061 1329254..1330000 1 NC_017568.1 identified by match to protein family HMM PF00849, match to protein family HMM PF01479, match to protein family HMM TIGR00093; ribosomal large subunit pseudouridine synthase B 1330000 rluB 12611061 rluB Staphylococcus pseudintermedius ED99 ribosomal large subunit pseudouridine synthase B YP_006015412.1 1329254 D 984892 CDS YP_006015413.1 386319250 12611062 1330109..1330834 1 NC_017568.1 identified by match to protein family HMM PF00072, match to protein family HMM PF00486; transcriptional regulatory protein SrrA 1330834 srrA 12611062 srrA Staphylococcus pseudintermedius ED99 transcriptional regulatory protein SrrA YP_006015413.1 1330109 D 984892 CDS YP_006015414.1 386319251 12611063 1330821..1332578 1 NC_017568.1 identified by match to protein family HMM PF00512, match to protein family HMM PF00672, match to protein family HMM PF02518; signal transduction histidine kinase SsrB 1332578 ssrB 12611063 ssrB Staphylococcus pseudintermedius ED99 signal transduction histidine kinase SsrB YP_006015414.1 1330821 D 984892 CDS YP_006015415.1 386319252 12611064 1332938..1333483 1 NC_017568.1 membrane protein 1333483 12611064 SPSE_1311 Staphylococcus pseudintermedius ED99 membrane protein YP_006015415.1 1332938 D 984892 CDS YP_006015416.1 386319253 12611065 complement(1333746..1333994) 1 NC_017568.1 ferredoxin 1333994 fer 12611065 fer Staphylococcus pseudintermedius ED99 ferredoxin YP_006015416.1 1333746 R 984892 CDS YP_006015417.1 386319254 12611066 1334096..1335043 1 NC_017568.1 hypothetical protein 1335043 12611066 SPSE_1313 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015417.1 1334096 D 984892 CDS YP_006015418.1 386319255 12611067 1335036..1336412 1 NC_017568.1 identified by match to protein family HMM PF00270, match to protein family HMM PF00271, match to protein family HMM PF04851, match to protein family HMM TIGR00614; ATP-dependent DNA helicase RecQ 1336412 recQ1 12611067 recQ1 Staphylococcus pseudintermedius ED99 ATP-dependent DNA helicase RecQ YP_006015418.1 1335036 D 984892 CDS YP_006015419.1 386319256 12611068 1336587..1337942 1 NC_017568.1 identified by match to protein family HMM PF01476; elastin-binding protein EbpS 1337942 ebpS 12611068 ebpS Staphylococcus pseudintermedius ED99 elastin-binding protein EbpS YP_006015419.1 1336587 D 984892 CDS YP_006015420.1 386319257 12611069 1338188..1339174 1 NC_017568.1 identified by match to protein family HMM PF00070, match to protein family HMM PF07992; pyridine nucleotide-disulfide oxidoreductase family protein 1339174 12611069 SPSE_1316 Staphylococcus pseudintermedius ED99 pyridine nucleotide-disulfide oxidoreductase family protein YP_006015420.1 1338188 D 984892 CDS YP_006015421.1 386319258 12611070 complement(1339471..1340439) 1 NC_017568.1 identified by match to protein family HMM PF00710; L-asparaginase 1340439 ansA 12611070 ansA Staphylococcus pseudintermedius ED99 L-asparaginase YP_006015421.1 1339471 R 984892 CDS YP_006015422.1 386319259 12611071 1340513..1341172 1 NC_017568.1 identified by match to protein family HMM PF02224, match to protein family HMM TIGR00017; cytidylate kinase 1341172 cmk 12611071 cmk Staphylococcus pseudintermedius ED99 cytidylate kinase YP_006015422.1 1340513 D 984892 CDS YP_006015423.1 386319260 12611072 1341261..1342445 1 NC_017568.1 identified by match to protein family HMM PF00575; 30S ribosomal protein S1 1342445 rpsA 12611072 rpsA Staphylococcus pseudintermedius ED99 30S ribosomal protein S1 YP_006015423.1 1341261 D 984892 CDS YP_006015424.1 386319261 12611073 1342812..1344122 1 NC_017568.1 identified by match to protein family HMM PF01926, match to protein family HMM PF08477, match to protein family HMM TIGR00231, match to protein family HMM TIGR03594; GTP-binding protein EngA 1344122 engA 12611073 engA Staphylococcus pseudintermedius ED99 GTP-binding protein EngA YP_006015424.1 1342812 D 984892 CDS YP_006015425.1 386319262 12611074 1344138..1345136 1 NC_017568.1 identified by match to protein family HMM PF01210, match to protein family HMM PF03807, match to protein family HMM PF07479; glycerol-3-phosphate dehydrogenase [NAD(P)+] 1345136 gpsA 12611074 gpsA Staphylococcus pseudintermedius ED99 glycerol-3-phosphate dehydrogenase [NAD(P)+] YP_006015425.1 1344138 D 984892 CDS YP_006015426.1 386319263 12611075 1345307..1345579 1 NC_017568.1 identified by match to protein family HMM PF00216; DNA-binding protein HU 1345579 hup 12611075 hup Staphylococcus pseudintermedius ED99 DNA-binding protein HU YP_006015426.1 1345307 D 984892 CDS YP_006015427.1 386319264 12611076 1346055..1346624 1 NC_017568.1 hypothetical protein 1346624 12611076 SPSE_1323 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015427.1 1346055 D 984892 CDS YP_006015428.1 386319265 12611077 1346634..1347347 1 NC_017568.1 identified by match to protein family HMM PF01209, match to protein family HMM PF02390, match to protein family HMM PF08241, match to protein family HMM PF08242, match to protein family HMM TIGR01934; menaquinone biosynthesis methyltransferase UbiE 1347347 ubiE 12611077 ubiE Staphylococcus pseudintermedius ED99 menaquinone biosynthesis methyltransferase UbiE YP_006015428.1 1346634 D 984892 CDS YP_006015429.1 386319266 12611078 1347365..1348321 1 NC_017568.1 identified by match to protein family HMM PF00348; heptaprenyl diphosphate synthase component II 1348321 12611078 SPSE_1325 Staphylococcus pseudintermedius ED99 heptaprenyl diphosphate synthase component II YP_006015429.1 1347365 D 984892 CDS YP_006015430.1 386319267 12611079 1348403..1348855 1 NC_017568.1 identified by match to protein family HMM PF00334; nucleoside diphosphate kinase 1348855 ndk 12611079 ndk Staphylococcus pseudintermedius ED99 nucleoside diphosphate kinase YP_006015430.1 1348403 D 984892 CDS YP_006015431.1 386319268 12611080 1349131..1350300 1 NC_017568.1 identified by match to protein family HMM PF01264, match to protein family HMM TIGR00033; chorismate synthase 1350300 aroC 12611080 aroC Staphylococcus pseudintermedius ED99 chorismate synthase YP_006015431.1 1349131 D 984892 CDS YP_006015432.1 386319269 12611081 1350317..1351390 1 NC_017568.1 identified by match to protein family HMM PF01761, match to protein family HMM TIGR01357; 3-dehydroquinate synthase 1351390 aroB 12611081 aroB Staphylococcus pseudintermedius ED99 3-dehydroquinate synthase YP_006015432.1 1350317 D 984892 CDS YP_006015433.1 386319270 12611082 1351391..1352680 1 NC_017568.1 identified by match to protein family HMM PF00275, match to protein family HMM TIGR01356; 3-phosphoshikimate 1-carboxyvinyltransferase 1352680 aroA 12611082 aroA Staphylococcus pseudintermedius ED99 3-phosphoshikimate 1-carboxyvinyltransferase YP_006015433.1 1351391 D 984892 CDS YP_006015434.1 386319271 12611083 1352682..1353923 1 NC_017568.1 identified by match to protein family HMM PF00515, match to protein family HMM PF07719; hypothetical protein 1353923 12611083 SPSE_1330 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015434.1 1352682 D 984892 CDS YP_006015435.1 386319272 12611084 1353935..1354492 1 NC_017568.1 identified by match to protein family HMM PF08864; hypothetical protein 1354492 12611084 SPSE_1331 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015435.1 1353935 D 984892 CDS YP_006015436.1 386319273 12611085 1354521..1355114 1 NC_017568.1 identified by match to protein family HMM PF07187; membrane protein 1355114 12611085 SPSE_1332 Staphylococcus pseudintermedius ED99 membrane protein YP_006015436.1 1354521 D 984892 CDS YP_006015437.1 386319274 12611086 1355153..1355851 1 NC_017568.1 identified by match to protein family HMM PF04298; Zn-dependent protease 1355851 12611086 SPSE_1333 Staphylococcus pseudintermedius ED99 Zn-dependent protease YP_006015437.1 1355153 D 984892 CDS YP_006015438.1 386319275 12611087 1356029..1356352 1 NC_017568.1 identified by match to protein family HMM PF03819; MazG nucleotide pyrophosphohydrolase domain-containing protein 1356352 12611087 SPSE_1334 Staphylococcus pseudintermedius ED99 MazG nucleotide pyrophosphohydrolase domain-containing protein YP_006015438.1 1356029 D 984892 CDS YP_006015439.1 386319276 12611088 1356368..1357492 1 NC_017568.1 identified by match to protein family HMM PF00534; glycoside hydrolase family protein 1357492 12611088 SPSE_1335 Staphylococcus pseudintermedius ED99 glycoside hydrolase family protein YP_006015439.1 1356368 D 984892 CDS YP_006015440.1 386319277 12611089 1357496..1358698 1 NC_017568.1 identified by match to protein family HMM PF01743; tRNA CCA-pyrophosphorylase 1358698 cca 12611089 cca Staphylococcus pseudintermedius ED99 tRNA CCA-pyrophosphorylase YP_006015440.1 1357496 D 984892 CDS YP_006015441.1 386319278 12611090 1358682..1359653 1 NC_017568.1 identified by match to protein family HMM PF03099, match to protein family HMM PF08279, match to protein family HMM TIGR00121; biotin--acetyl-CoA-carboxylase ligase 1359653 birA 12611090 birA Staphylococcus pseudintermedius ED99 biotin--acetyl-CoA-carboxylase ligase YP_006015441.1 1358682 D 984892 CDS YP_006015442.1 386319279 12611091 1359681..1362383 1 NC_017568.1 identified by match to protein family HMM PF00929, match to protein family HMM TIGR00573, match to protein family HMM TIGR01407; DnaQ family exonuclease/DinG family helicase 1362383 12611091 SPSE_1338 Staphylococcus pseudintermedius ED99 DnaQ family exonuclease/DinG family helicase YP_006015442.1 1359681 D 984892 CDS YP_006015443.1 386319280 12611092 1362451..1363743 1 NC_017568.1 identified by match to protein family HMM PF00152, match to protein family HMM PF00587, match to protein family HMM PF01336, match to protein family HMM TIGR00457; asparaginyl-tRNA synthetase 1363743 asnS 12611092 asnS Staphylococcus pseudintermedius ED99 asparaginyl-tRNA synthetase YP_006015443.1 1362451 D 984892 CDS YP_006015444.1 386319281 12611093 1363918..1364610 1 NC_017568.1 identified by match to protein family HMM PF04271, match to protein family HMM TIGR01446; DNA replication protein DnaD 1364610 12611093 SPSE_1340 Staphylococcus pseudintermedius ED99 DNA replication protein DnaD YP_006015444.1 1363918 D 984892 CDS YP_006015445.1 386319282 12611094 1364600..1365274 1 NC_017568.1 identified by match to protein family HMM PF00633, match to protein family HMM PF00730, match to protein family HMM TIGR01083; endonuclease III 1365274 nth 12611094 nth Staphylococcus pseudintermedius ED99 endonuclease III YP_006015445.1 1364600 D 984892 CDS YP_006015446.1 386319283 12611095 1365271..1365606 1 NC_017568.1 hypothetical protein 1365606 12611095 SPSE_1342 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015446.1 1365271 D 984892 CDS YP_006015447.1 386319284 12611096 complement(1366287..1368509) 1 NC_017568.1 identified by match to protein family HMM PF00905, match to protein family HMM PF00912; penicillin-binding protein 2 1368509 pbp2 12611096 pbp2 Staphylococcus pseudintermedius ED99 penicillin-binding protein 2 YP_006015447.1 1366287 R 984892 CDS YP_006015448.1 386319285 12611097 complement(1368506..1369132) 1 NC_017568.1 identified by match to protein family HMM PF03838, match to protein family HMM TIGR00648; recombination protein U 1369132 recU 12611097 recU Staphylococcus pseudintermedius ED99 recombination protein U YP_006015448.1 1368506 R 984892 CDS YP_006015449.1 386319286 12611098 1369328..1369669 1 NC_017568.1 hypothetical protein 1369669 12611098 SPSE_1345 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015449.1 1369328 D 984892 CDS YP_006015450.1 386319287 12611099 1369662..1370219 1 NC_017568.1 identified by match to protein family HMM PF06908; hypothetical protein 1370219 12611099 SPSE_1346 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015450.1 1369662 D 984892 CDS YP_006015451.1 386319288 12611100 1370239..1370574 1 NC_017568.1 identified by match to protein family HMM PF05103, match to protein family HMM TIGR03544; putative cell division initiation protein, DivIVA family protein 1370574 12611100 SPSE_1347 Staphylococcus pseudintermedius ED99 putative cell division initiation protein, DivIVA family protein YP_006015451.1 1370239 D 984892 CDS YP_006015452.1 386319289 12611102 1371283..1372410 1 NC_017568.1 identified by match to protein family HMM PF01170, match to protein family HMM PF02926; putative RNA methylase family protein 1372410 12611102 SPSE_1349 Staphylococcus pseudintermedius ED99 putative RNA methylase family protein YP_006015452.1 1371283 D 984892 CDS YP_006015453.1 386319290 12611103 1372444..1373361 1 NC_017568.1 identified by match to protein family HMM PF00892, match to protein family HMM TIGR00688; chloramphenicol-sensitive protein RarD 1373361 rarD 12611103 rarD Staphylococcus pseudintermedius ED99 chloramphenicol-sensitive protein RarD YP_006015453.1 1372444 D 984892 CDS YP_006015454.1 386319291 12611104 1373525..1376980 1 NC_017568.1 identified by match to protein family HMM PF00350, match to protein family HMM PF01926; hypothetical protein 1376980 12611104 SPSE_1351 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015454.1 1373525 D 984892 CDS YP_006015455.1 386319292 12611105 1376985..1377866 1 NC_017568.1 identified by match to protein family HMM PF01367, match to protein family HMM PF02739; 5'-3' exonuclease 1377866 12611105 SPSE_1352 Staphylococcus pseudintermedius ED99 5'-3' exonuclease YP_006015455.1 1376985 D 984892 CDS YP_006015456.1 386319293 12611106 complement(1377996..1378394) 1 NC_017568.1 RNase HI 1378394 12611106 SPSE_1353 Staphylococcus pseudintermedius ED99 RNase HI YP_006015456.1 1377996 R 984892 CDS YP_006015457.1 386319294 12611107 complement(1378450..1379148) 1 NC_017568.1 identified by match to protein family HMM PF02592, match to protein family HMM TIGR00697; hypothetical protein 1379148 12611107 SPSE_1354 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015457.1 1378450 R 984892 CDS YP_006015458.1 386319295 12611108 1379374..1379559 1 NC_017568.1 hypothetical protein 1379559 12611108 SPSE_1356 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015458.1 1379374 D 984892 CDS YP_006015459.1 386319296 12611109 1379591..1380709 1 NC_017568.1 identified by match to protein family HMM PF03130, match to protein family HMM PF08712; virulence factor C 1380709 12611109 SPSE_1357 Staphylococcus pseudintermedius ED99 virulence factor C YP_006015459.1 1379591 D 984892 CDS YP_006015460.1 386319297 12611110 1380734..1381174 1 NC_017568.1 identified by match to protein family HMM PF06491; hypothetical protein 1381174 12611110 SPSE_1358 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015460.1 1380734 D 984892 CDS YP_006015461.1 386319298 12611111 1381982..1382935 1 NC_017568.1 identified by match to protein family HMM PF00303, match to protein family HMM TIGR03284; thymidylate synthase 1382935 thyA 12611111 thyA Staphylococcus pseudintermedius ED99 thymidylate synthase YP_006015461.1 1381982 D 984892 CDS YP_006015462.1 386319299 12611112 1382954..1383433 1 NC_017568.1 identified by match to protein family HMM PF00186; dihydrofolate reductase 1383433 folA 12611112 folA Staphylococcus pseudintermedius ED99 dihydrofolate reductase YP_006015462.1 1382954 D 984892 CDS YP_006015463.1 386319300 12611113 1383452..1384306 1 NC_017568.1 identified by match to protein family HMM PF02645, match to protein family HMM TIGR00762; DegV family protein 1384306 12611113 SPSE_1361 Staphylococcus pseudintermedius ED99 DegV family protein YP_006015463.1 1383452 D 984892 CDS YP_006015464.1 386319301 12611114 1384324..1384848 1 NC_017568.1 identified by match to protein family HMM PF01625, match to protein family HMM TIGR00401; peptide-methionine (S)-S-oxide reductase msrA1 1384848 msrA1 12611114 msrA1 Staphylococcus pseudintermedius ED99 peptide-methionine (S)-S-oxide reductase msrA1 YP_006015464.1 1384324 D 984892 CDS YP_006015465.1 386319302 12611115 1384845..1385273 1 NC_017568.1 identified by match to protein family HMM PF01641, match to protein family HMM TIGR00357; peptide-methionine-R-sulfoxide reductase 1385273 msrB 12611115 msrB Staphylococcus pseudintermedius ED99 peptide-methionine-R-sulfoxide reductase YP_006015465.1 1384845 D 984892 CDS YP_006015466.1 386319303 12611116 1385287..1385787 1 NC_017568.1 identified by match to protein family HMM PF00358, match to protein family HMM TIGR00830; PTS system glucose-specific IIA component 1385787 12611116 SPSE_1364 Staphylococcus pseudintermedius ED99 PTS system glucose-specific IIA component YP_006015466.1 1385287 D 984892 CDS YP_006015467.1 386319304 12611117 1385787..1386008 1 NC_017568.1 identified by match to protein family HMM PF06855; hypothetical protein 1386008 12611117 SPSE_1365 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015467.1 1385787 D 984892 CDS YP_006015468.1 386319305 12611118 1386059..1387588 1 NC_017568.1 identified by match to protein family HMM PF00595, match to protein family HMM PF01471, match to protein family HMM PF03572, match to protein family HMM TIGR00225; carboxy-terminal processing proteinase ctpA 1387588 12611118 SPSE_1366 Staphylococcus pseudintermedius ED99 carboxy-terminal processing proteinase ctpA YP_006015468.1 1386059 D 984892 CDS YP_006015469.1 386319306 12611119 1387594..1388103 1 NC_017568.1 identified by match to protein family HMM PF00583; GNAT family acetyltransferase 1388103 12611119 SPSE_1367 Staphylococcus pseudintermedius ED99 GNAT family acetyltransferase YP_006015469.1 1387594 D 984892 CDS YP_006015470.1 386319307 12611120 1388113..1389198 1 NC_017568.1 identified by match to protein family HMM PF03033, match to protein family HMM PF04101; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1389198 murG 12611120 murG Staphylococcus pseudintermedius ED99 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase YP_006015470.1 1388113 D 984892 CDS YP_006015471.1 386319308 12611121 1389195..1389818 1 NC_017568.1 identified by match to protein family HMM PF01569; phospholipid phosphatase 1389818 12611121 SPSE_1369 Staphylococcus pseudintermedius ED99 phospholipid phosphatase YP_006015471.1 1389195 D 984892 CDS YP_006015472.1 386319309 12611122 1390314..1390991 1 NC_017568.1 identified by match to protein family HMM PF00072, match to protein family HMM PF00486; two-component response regulator ArlR 1390991 arlR 12611122 arlR Staphylococcus pseudintermedius ED99 two-component response regulator ArlR YP_006015472.1 1390314 D 984892 CDS YP_006015473.1 386319310 12611123 1390988..1392355 1 NC_017568.1 identified by match to protein family HMM PF00512, match to protein family HMM PF00672, match to protein family HMM PF02518; signal transduction histidine kinase ArlS 1392355 arlS 12611123 arlS Staphylococcus pseudintermedius ED99 signal transduction histidine kinase ArlS YP_006015473.1 1390988 D 984892 CDS YP_006015474.1 386319311 12611124 1392450..1395236 1 NC_017568.1 identified by match to protein family HMM PF00676, match to protein family HMM PF02779, match to protein family HMM TIGR00239; 2-oxoglutarate dehydrogenase, E1 component 1395236 sucA 12611124 sucA Staphylococcus pseudintermedius ED99 2-oxoglutarate dehydrogenase, E1 component YP_006015474.1 1392450 D 984892 CDS YP_006015475.1 386319312 12611125 1395251..1396528 1 NC_017568.1 identified by match to protein family HMM PF00198, match to protein family HMM PF00364, match to protein family HMM PF02817, match to protein family HMM TIGR01347; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase 1396528 sucB 12611125 sucB Staphylococcus pseudintermedius ED99 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase YP_006015475.1 1395251 D 984892 CDS YP_006015476.1 386319313 12611126 1396727..1396966 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1396966 12611126 SPSE_1374 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015476.1 1396727 D 984892 CDS YP_006015477.1 386319314 12611127 1397031..1397855 1 NC_017568.1 glyoxalase family protein 1397855 12611127 SPSE_1375 Staphylococcus pseudintermedius ED99 glyoxalase family protein YP_006015477.1 1397031 D 984892 CDS YP_006015478.1 386319315 12611128 1397859..1398062 1 NC_017568.1 hypothetical protein 1398062 12611128 SPSE_1376 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015478.1 1397859 D 984892 CDS YP_006015479.1 386319316 12611129 1398160..1398957 1 NC_017568.1 identified by match to protein family HMM PF07726, match to protein family HMM PF07728; nitric-oxide reductase 1398957 12611129 SPSE_1377 Staphylococcus pseudintermedius ED99 nitric-oxide reductase YP_006015479.1 1398160 D 984892 CDS YP_006015480.1 386319317 12611130 1398969..1400858 1 NC_017568.1 hypothetical protein 1400858 12611130 SPSE_1378 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015480.1 1398969 D 984892 CDS YP_006015481.1 386319318 12611131 1400977..1402323 1 NC_017568.1 identified by match to protein family HMM PF05525, match to protein family HMM TIGR00796; branched-chain amino acid transport protein 1402323 12611131 SPSE_1379 Staphylococcus pseudintermedius ED99 branched-chain amino acid transport protein YP_006015481.1 1400977 D 984892 CDS YP_006015482.1 386319319 12611133 complement(1403130..1404296) 1 NC_017568.1 identified by match to protein family HMM PF05816; tellurite resistance protein 1404296 12611133 SPSE_1382 Staphylococcus pseudintermedius ED99 tellurite resistance protein YP_006015482.1 1403130 R 984892 CDS YP_006015483.1 386319320 12611134 complement(1404293..1404931) 1 NC_017568.1 5-bromo-4-chloroindolyl phosphate hydrolysis protein XpaC 1404931 12611134 SPSE_1383 Staphylococcus pseudintermedius ED99 5-bromo-4-chloroindolyl phosphate hydrolysis protein XpaC YP_006015483.1 1404293 R 984892 CDS YP_006015484.1 386319321 12611135 complement(1404944..1405216) 1 NC_017568.1 identified by match to protein family HMM PF00708; acylphosphatase 1405216 acyP 12611135 acyP Staphylococcus pseudintermedius ED99 acylphosphatase YP_006015484.1 1404944 R 984892 CDS YP_006015485.1 386319322 12611136 1405375..1405683 1 NC_017568.1 identified by match to protein family HMM PF06279; hypothetical protein 1405683 12611136 SPSE_1385 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015485.1 1405375 D 984892 CDS YP_006015486.1 386319323 12611137 1405876..1406076 1 NC_017568.1 identified by match to protein family HMM PF00313; cold shock protein 1406076 cspA 12611137 cspA Staphylococcus pseudintermedius ED99 cold shock protein YP_006015486.1 1405876 D 984892 CDS YP_006015487.1 386319324 12611138 1406402..1406515 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1406515 12611138 SPSE_1387 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015487.1 1406402 D 984892 CDS YP_006015488.1 386319325 12611139 1406617..1406796 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1406796 12611139 SPSE_1388 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015488.1 1406617 D 984892 CDS YP_006015489.1 386319326 12611140 complement(1406918..1408183) 1 NC_017568.1 identified by match to protein family HMM PF00278, match to protein family HMM PF02784, match to protein family HMM TIGR01048; diaminopimelate decarboxylase 1408183 lysA 12611140 lysA Staphylococcus pseudintermedius ED99 diaminopimelate decarboxylase YP_006015489.1 1406918 R 984892 CDS YP_006015490.1 386319327 12611141 complement(1408184..1409263) 1 NC_017568.1 identified by match to protein family HMM PF00842, match to protein family HMM PF01168, match to protein family HMM TIGR00492; alanine racemase 2 1409263 alr2 12611141 alr2 Staphylococcus pseudintermedius ED99 alanine racemase 2 YP_006015490.1 1408184 R 984892 CDS YP_006015491.1 386319328 12611142 complement(1409260..1410414) 1 NC_017568.1 identified by match to protein family HMM PF01546, match to protein family HMM PF07687, match to protein family HMM TIGR01891; amidohydrolase family protein 1410414 12611142 SPSE_1391 Staphylococcus pseudintermedius ED99 amidohydrolase family protein YP_006015491.1 1409260 R 984892 CDS YP_006015492.1 386319329 12611143 complement(1411106..1411825) 1 NC_017568.1 identified by match to protein family HMM PF00132, match to protein family HMM PF08503, match to protein family HMM TIGR03532; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 1411825 dapD 12611143 dapD Staphylococcus pseudintermedius ED99 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase YP_006015492.1 1411106 R 984892 CDS YP_006015493.1 386319330 12611144 complement(1411845..1412567) 1 NC_017568.1 identified by match to protein family HMM PF01113, match to protein family HMM PF05173, match to protein family HMM TIGR00036; dihydrodipicolinate reductase 1412567 dapB 12611144 dapB Staphylococcus pseudintermedius ED99 dihydrodipicolinate reductase YP_006015493.1 1411845 R 984892 CDS YP_006015494.1 386319331 12611145 complement(1412564..1413442) 1 NC_017568.1 identified by match to protein family HMM PF00701, match to protein family HMM TIGR00674; dihydrodipicolinate synthase 1413442 dapA 12611145 dapA Staphylococcus pseudintermedius ED99 dihydrodipicolinate synthase YP_006015494.1 1412564 R 984892 CDS YP_006015495.1 386319332 12611146 complement(1413446..1414432) 1 NC_017568.1 identified by match to protein family HMM PF01118, match to protein family HMM PF02774, match to protein family HMM TIGR01296; aspartate-semialdehyde dehydrogenase 1414432 asd 12611146 asd Staphylococcus pseudintermedius ED99 aspartate-semialdehyde dehydrogenase YP_006015495.1 1413446 R 984892 CDS YP_006015496.1 386319333 12611147 complement(1415072..1416682) 1 NC_017568.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1416682 12611147 SPSE_1397 Staphylococcus pseudintermedius ED99 ABC transporter ATP-binding protein YP_006015496.1 1415072 R 984892 CDS YP_006015497.1 386319334 12611148 1416883..1417794 1 NC_017568.1 virulence factor B 1417794 12611148 SPSE_1398 Staphylococcus pseudintermedius ED99 virulence factor B YP_006015497.1 1416883 D 984892 CDS YP_006015498.1 386319335 12611149 1418061..1421156 1 NC_017568.1 identified by match to protein family HMM PF00746, match to protein family HMM PF04650, match to protein family HMM PF05738, match to protein family HMM TIGR01167, match to protein family HMM TIGR01168; LPXTG-motif cell wall anchor domain-containing protein 1421156 spsD 12611149 spsD Staphylococcus pseudintermedius ED99 LPXTG-motif cell wall anchor domain-containing protein YP_006015498.1 1418061 D 984892 CDS YP_006015499.1 386319336 12611150 complement(1421217..1423016) 1 NC_017568.1 identified by match to protein family HMM PF01432, match to protein family HMM PF08439, match to protein family HMM TIGR00181; putative oligoendopeptidase 1423016 12611150 SPSE_1400 Staphylococcus pseudintermedius ED99 putative oligoendopeptidase YP_006015499.1 1421217 R 984892 CDS YP_006015500.1 386319337 12611151 1423148..1423471 1 NC_017568.1 hypothetical protein 1423471 12611151 SPSE_1401 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015500.1 1423148 D 984892 CDS YP_006015501.1 386319338 12611152 complement(1424062..1425321) 1 NC_017568.1 identified by match to protein family HMM PF02388; aminoacyltransferase FemB 1425321 femB 12611152 femB Staphylococcus pseudintermedius ED99 aminoacyltransferase FemB YP_006015501.1 1424062 R 984892 CDS YP_006015502.1 386319339 12611153 complement(1425351..1426616) 1 NC_017568.1 identified by match to protein family HMM PF02388; aminoacyltransferase FemA 1426616 femA 12611153 femA Staphylococcus pseudintermedius ED99 aminoacyltransferase FemA YP_006015502.1 1425351 R 984892 CDS YP_006015503.1 386319340 12611154 complement(1426791..1427825) 1 NC_017568.1 identified by match to protein family HMM PF05343; deblocking aminopeptidase, M42 family 1427825 12611154 SPSE_1404 Staphylococcus pseudintermedius ED99 deblocking aminopeptidase, M42 family YP_006015503.1 1426791 R 984892 CDS YP_006015504.1 386319341 12611155 1427968..1429059 1 NC_017568.1 identified by match to protein family HMM PF01210, match to protein family HMM PF01842, match to protein family HMM PF02153; prephenate dehydrogenase 1429059 tyrA 12611155 tyrA Staphylococcus pseudintermedius ED99 prephenate dehydrogenase YP_006015504.1 1427968 D 984892 CDS YP_006015505.1 386319342 12611156 complement(1429135..1430397) 1 NC_017568.1 identified by match to protein family HMM PF00817; DNA-damage repair protein 1430397 12611156 SPSE_1406 Staphylococcus pseudintermedius ED99 DNA-damage repair protein YP_006015505.1 1429135 R 984892 CDS YP_006015506.1 386319343 12611157 complement(1430550..1430957) 1 NC_017568.1 hypothetical protein 1430957 12611157 SPSE_1407 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015506.1 1430550 R 984892 CDS YP_006015507.1 386319344 12611158 1431069..1431254 1 NC_017568.1 identified by match to protein family HMM PF01361, match to protein family HMM TIGR00013; 4-oxalocrotonate tautomerase 1431254 dmpI 12611158 dmpI Staphylococcus pseudintermedius ED99 4-oxalocrotonate tautomerase YP_006015507.1 1431069 D 984892 CDS YP_006015508.1 386319345 12611159 complement(1431310..1432281) 1 NC_017568.1 identified by match to protein family HMM PF03816, match to protein family HMM TIGR00350; peptide methionine sulfoxide reductase regulator MsrR 1432281 msrR 12611159 msrR Staphylococcus pseudintermedius ED99 peptide methionine sulfoxide reductase regulator MsrR YP_006015508.1 1431310 R 984892 CDS YP_006015509.1 386319346 12611160 1432420..1432938 1 NC_017568.1 identified by match to protein family HMM PF01625, match to protein family HMM TIGR00401; peptide-methionine (S)-S-oxide reductase msrA2 1432938 msrA2 12611160 msrA2 Staphylococcus pseudintermedius ED99 peptide-methionine (S)-S-oxide reductase msrA2 YP_006015509.1 1432420 D 984892 CDS YP_006015510.1 386319347 12611161 complement(1433185..1435704) 1 NC_017568.1 identified by match to protein family HMM PF04329, match to protein family HMM PF04330, match to protein family HMM PF04331; oxacillin resistance-related FmtC protein 1435704 fmtC 12611161 fmtC Staphylococcus pseudintermedius ED99 oxacillin resistance-related FmtC protein YP_006015510.1 1433185 R 984892 CDS YP_006015511.1 386319348 12611162 complement(1435800..1437002) 1 NC_017568.1 identified by match to protein family HMM PF01594; hypothetical protein 1437002 12611162 SPSE_1412 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015511.1 1435800 R 984892 CDS YP_006015512.1 386319349 12611163 complement(1437275..1439314) 1 NC_017568.1 identified by match to protein family HMM PF00358, match to protein family HMM PF00367, match to protein family HMM PF02378, match to protein family HMM TIGR00826, match to protein family HMM TIGR00830, match to protein family HMM TIGR02002; PTS system glucose-specific transporter subunit IIBC 1439314 12611163 SPSE_1413 Staphylococcus pseudintermedius ED99 PTS system glucose-specific transporter subunit IIBC YP_006015512.1 1437275 R 984892 CDS YP_006015513.1 386319350 12611164 complement(1439425..1440276) 1 NC_017568.1 identified by match to protein family HMM PF00874, match to protein family HMM PF03123; transcriptional antiterminator 1440276 glcT 12611164 glcT Staphylococcus pseudintermedius ED99 transcriptional antiterminator YP_006015513.1 1439425 R 984892 CDS YP_006015514.1 386319351 12611165 complement(1440514..1441833) 1 NC_017568.1 identified by match to protein family HMM PF01610; transposase for ISSps1 1441833 12611165 SPSE_1415 Staphylococcus pseudintermedius ED99 transposase for ISSps1 YP_006015514.1 1440514 R 984892 CDS YP_006015515.1 386319352 12611166 complement(1441964..1443427) 1 NC_017568.1 identified by match to protein family HMM PF01235, match to protein family HMM TIGR00835; sodium:alanine symporter family protein 1443427 12611166 SPSE_1416 Staphylococcus pseudintermedius ED99 sodium:alanine symporter family protein YP_006015515.1 1441964 R 984892 CDS YP_006015516.1 386319353 12611167 complement(1443530..1445941) 1 NC_017568.1 identified by match to protein family HMM PF00521, match to protein family HMM PF03989, match to protein family HMM TIGR01061; DNA topoisomerase IV subunit A 1445941 parC 12611167 parC Staphylococcus pseudintermedius ED99 DNA topoisomerase IV subunit A YP_006015516.1 1443530 R 984892 CDS YP_006015517.1 386319354 12611168 complement(1445941..1447938) 1 NC_017568.1 identified by match to protein family HMM PF00204, match to protein family HMM PF00986, match to protein family HMM PF01751, match to protein family HMM PF02518, match to protein family HMM TIGR01058; DNA topoisomerase IV subunit B 1447938 parE 12611168 parE Staphylococcus pseudintermedius ED99 DNA topoisomerase IV subunit B YP_006015517.1 1445941 R 984892 CDS YP_006015518.1 386319355 12611169 1448229..1448810 1 NC_017568.1 identified by match to protein family HMM PF02660, match to protein family HMM TIGR00023; hypothetical protein 1448810 12611169 SPSE_1419 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015518.1 1448229 D 984892 CDS YP_006015519.1 386319356 12611170 1448893..1449198 1 NC_017568.1 identified by match to protein family HMM PF01521; hypothetical protein 1449198 12611170 SPSE_1420 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015519.1 1448893 D 984892 CDS YP_006015520.1 386319357 12611171 complement(1449327..1449791) 1 NC_017568.1 identified by match to protein family HMM PF03061, match to protein family HMM TIGR00051; thioesterase family protein 1449791 12611171 SPSE_1421 Staphylococcus pseudintermedius ED99 thioesterase family protein YP_006015520.1 1449327 R 984892 CDS YP_006015521.1 386319358 12611172 complement(1450156..1452861) 1 NC_017568.1 identified by match to protein family HMM PF00330, match to protein family HMM PF00694, match to protein family HMM TIGR01341; aconitate hydratase 1 1452861 acnA 12611172 acnA Staphylococcus pseudintermedius ED99 aconitate hydratase 1 YP_006015521.1 1450156 R 984892 CDS YP_006015522.1 386319359 12611173 complement(1453160..1454794) 1 NC_017568.1 identified by match to protein family HMM PF02028, match to protein family HMM TIGR00842; glycine betaine transporter 1454794 opuD3 12611173 opuD3 Staphylococcus pseudintermedius ED99 glycine betaine transporter YP_006015522.1 1453160 R 984892 CDS YP_006015523.1 386319360 12611174 1455034..1455393 1 NC_017568.1 identified by match to protein family HMM PF01741, match to protein family HMM TIGR00220; large conductance mechanosensitive channel protein 1455393 mscL 12611174 mscL Staphylococcus pseudintermedius ED99 large conductance mechanosensitive channel protein YP_006015523.1 1455034 D 984892 CDS YP_006015524.1 386319361 12611175 complement(1455622..1458654) 1 NC_017568.1 exonuclease SbcC 1458654 sbcC 12611175 sbcC Staphylococcus pseudintermedius ED99 exonuclease SbcC YP_006015524.1 1455622 R 984892 CDS YP_006015525.1 386319362 12611176 complement(1458657..1459778) 1 NC_017568.1 identified by match to protein family HMM PF00149, match to protein family HMM TIGR00619; exonuclease SbcD 1459778 sbcD 12611176 sbcD Staphylococcus pseudintermedius ED99 exonuclease SbcD YP_006015525.1 1458657 R 984892 CDS YP_006015526.1 386319363 12611177 complement(1459964..1461250) 1 NC_017568.1 identified by match to protein family HMM PF00078, match to protein family HMM PF08388; RNA-directed DNA polymerase 1461250 12611177 SPSE_1427 Staphylococcus pseudintermedius ED99 RNA-directed DNA polymerase YP_006015526.1 1459964 R 984892 CDS YP_006015527.1 386319364 12611178 complement(1461807..1462274) 1 NC_017568.1 identified by match to protein family HMM PF07301; hypothetical protein 1462274 12611178 SPSE_1428 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015527.1 1461807 R 984892 CDS YP_006015528.1 386319365 12611179 complement(1462522..1462749) 1 NC_017568.1 identified by match to protein family HMM PF03672; hypothetical protein 1462749 12611179 SPSE_1429 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015528.1 1462522 R 984892 CDS YP_006015529.1 386319366 12611180 complement(1462907..1464892) 1 NC_017568.1 identified by match to protein family HMM PF00456, match to protein family HMM PF02779, match to protein family HMM PF02780, match to protein family HMM TIGR00232; transketolase 1464892 tkt 12611180 tkt Staphylococcus pseudintermedius ED99 transketolase YP_006015529.1 1462907 R 984892 CDS YP_006015530.1 386319367 12611181 complement(1464997..1465233) 1 NC_017568.1 identified by match to protein family HMM PF05979; hypothetical protein 1465233 12611181 SPSE_1431 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015530.1 1464997 R 984892 CDS YP_006015531.1 386319368 12611182 complement(1465500..1465733) 1 NC_017568.1 hypothetical protein 1465733 12611182 SPSE_1432 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015531.1 1465500 R 984892 CDS YP_006015532.1 386319369 12611183 1465878..1466501 1 NC_017568.1 identified by match to protein family HMM PF00717, match to protein family HMM PF01726, match to protein family HMM TIGR00498; SOS regulatory protein LexA 1466501 lexA 12611183 lexA Staphylococcus pseudintermedius ED99 SOS regulatory protein LexA YP_006015532.1 1465878 D 984892 CDS YP_006015533.1 386319370 12611184 complement(1466714..1467529) 1 NC_017568.1 identified by match to protein family HMM PF00188; hypothetical protein 1467529 12611184 SPSE_1434 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015533.1 1466714 R 984892 CDS YP_006015534.1 386319371 12611185 complement(1467736..1468713) 1 NC_017568.1 identified by match to protein family HMM PF00478, match to protein family HMM TIGR01306; guanosine monophosphate reductase 1468713 guaC 12611185 guaC Staphylococcus pseudintermedius ED99 guanosine monophosphate reductase YP_006015534.1 1467736 R 984892 CDS YP_006015535.1 386319372 12611186 complement(1468794..1469063) 1 NC_017568.1 identified by match to protein family HMM PF00253; 30S ribosomal protein S14 1469063 rpsN 12611186 rpsN Staphylococcus pseudintermedius ED99 30S ribosomal protein S14 YP_006015535.1 1468794 R 984892 CDS YP_006015536.1 386319373 12611187 1469235..1469384 1 NC_017568.1 hypothetical protein 1469384 12611187 SPSE_1437 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015536.1 1469235 D 984892 CDS YP_006015537.1 386319374 12611188 1469738..1471189 1 NC_017568.1 identified by match to protein family HMM PF00324; amino acid permease 1471189 12611188 SPSE_1438 Staphylococcus pseudintermedius ED99 amino acid permease YP_006015537.1 1469738 D 984892 CDS YP_006015538.1 386319375 12611189 1471363..1471677 1 NC_017568.1 hypothetical protein 1471677 12611189 SPSE_1439 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015538.1 1471363 D 984892 CDS YP_006015539.1 386319376 12611190 complement(1471831..1472634) 1 NC_017568.1 identified by match to protein family HMM PF00702, match to protein family HMM PF05116, match to protein family HMM PF08282, match to protein family HMM TIGR00099, match to protein family HMM TIGR01484; cof family hydrolase 1472634 12611190 SPSE_1440 Staphylococcus pseudintermedius ED99 cof family hydrolase YP_006015539.1 1471831 R 984892 CDS YP_006015540.1 386319377 12611191 complement(1472821..1473741) 1 NC_017568.1 identified by match to protein family HMM PF00288, match to protein family HMM PF08544, match to protein family HMM TIGR00191; homoserine kinase 1473741 thrB 12611191 thrB Staphylococcus pseudintermedius ED99 homoserine kinase YP_006015540.1 1472821 R 984892 CDS YP_006015541.1 386319378 12611192 complement(1473738..1474802) 1 NC_017568.1 identified by match to protein family HMM PF00291, match to protein family HMM TIGR00260; threonine synthase 1474802 thrC 12611192 thrC Staphylococcus pseudintermedius ED99 threonine synthase YP_006015541.1 1473738 R 984892 CDS YP_006015542.1 386319379 12611193 complement(1474808..1476091) 1 NC_017568.1 identified by match to protein family HMM PF00742, match to protein family HMM PF03447; homoserine dehydrogenase 1476091 hom 12611193 hom Staphylococcus pseudintermedius ED99 homoserine dehydrogenase YP_006015542.1 1474808 R 984892 CDS YP_006015543.1 386319380 12611194 1476283..1477635 1 NC_017568.1 identified by match to protein family HMM PF00696, match to protein family HMM PF01842, match to protein family HMM TIGR00657; aspartate kinase 1477635 12611194 SPSE_1444 Staphylococcus pseudintermedius ED99 aspartate kinase YP_006015543.1 1476283 D 984892 CDS YP_006015544.1 386319381 12611195 complement(1477679..1478266) 1 NC_017568.1 hypothetical protein 1478266 12611195 SPSE_1445 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015544.1 1477679 R 984892 CDS YP_006015545.1 386319382 12611196 1478417..1478539 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1478539 12611196 SPSE_1446 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015545.1 1478417 D 984892 CDS YP_006015546.1 386319383 12611197 1478783..1479145 1 NC_017568.1 staphylococcal accessory regulator family protein 1479145 12611197 SPSE_1447 Staphylococcus pseudintermedius ED99 staphylococcal accessory regulator family protein YP_006015546.1 1478783 D 984892 CDS YP_006015547.1 386319384 12611198 1479574..1480443 1 NC_017568.1 hypothetical protein 1480443 12611198 SPSE_1448 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015547.1 1479574 D 984892 CDS YP_006015548.1 386319385 12611199 complement(1480507..1481013) 1 NC_017568.1 identified by match to protein family HMM PF00565; thermonuclease 1481013 nucA 12611199 nucA Staphylococcus pseudintermedius ED99 thermonuclease YP_006015548.1 1480507 R 984892 CDS YP_006015549.1 386319386 12611200 1481153..1481350 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1481350 12611200 SPSE_1450 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015549.1 1481153 D 984892 CDS YP_006015550.1 386319387 12611201 complement(1481595..1481735) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1481735 12611201 SPSE_1451 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015550.1 1481595 R 984892 CDS YP_006015551.1 386319388 12611202 1482008..1482649 1 NC_017568.1 identified by match to protein family HMM PF00565; thermonuclease 1482649 nucB 12611202 nucB Staphylococcus pseudintermedius ED99 thermonuclease YP_006015551.1 1482008 D 984892 CDS YP_006015552.1 386319389 12611203 complement(1482840..1482953) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1482953 12611203 SPSE_1453 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015552.1 1482840 R 984892 CDS YP_006015553.1 386319390 12611204 complement(1482941..1483681) 1 NC_017568.1 identified by match to protein family HMM PF00702, match to protein family HMM TIGR01549; HAD-superfamily hydrolase 1483681 12611204 SPSE_1454 Staphylococcus pseudintermedius ED99 HAD-superfamily hydrolase YP_006015553.1 1482941 R 984892 CDS YP_006015554.1 386319391 12611205 complement(1483760..1484002) 1 NC_017568.1 hypothetical protein 1484002 12611205 SPSE_1455 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015554.1 1483760 R 984892 CDS YP_006015555.1 386319392 12611206 complement(1484163..1485455) 1 NC_017568.1 identified by match to protein family HMM PF07690; major facilitator family transporter 1485455 12611206 SPSE_1456 Staphylococcus pseudintermedius ED99 major facilitator family transporter YP_006015555.1 1484163 R 984892 CDS YP_006015556.1 386319393 12611207 complement(1485486..1486232) 1 NC_017568.1 identified by match to protein family HMM PF03009; glycerophosphoryl diester phosphodiesterase 1486232 12611207 SPSE_1457 Staphylococcus pseudintermedius ED99 glycerophosphoryl diester phosphodiesterase YP_006015556.1 1485486 R 984892 CDS YP_006015557.1 386319394 12611208 complement(1486493..1486627) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1486627 12611208 SPSE_1458 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015557.1 1486493 R 984892 CDS YP_006015558.1 386319395 12611209 complement(1486882..1487067) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1487067 12611209 SPSE_1459 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015558.1 1486882 R 984892 CDS YP_006015559.1 386319396 12611211 complement(1488907..1489086) 1 NC_017568.1 hypothetical protein 1489086 12611211 SPSE_1461 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015559.1 1488907 R 984892 CDS YP_006015560.1 386319397 12611212 1489727..1490440 1 NC_017568.1 identified by match to protein family HMM PF00589; integrase family protein 1490440 12611212 SPSE_1462 Staphylococcus pseudintermedius ED99 integrase family protein YP_006015560.1 1489727 D 984892 CDS YP_006015561.1 386319398 12611213 complement(1490536..1491876) 1 NC_017568.1 identified by match to protein family HMM PF00120, match to protein family HMM PF03951, match to protein family HMM TIGR00653; glutamine synthetase, type I 1491876 glnA 12611213 glnA Staphylococcus pseudintermedius ED99 glutamine synthetase, type I YP_006015561.1 1490536 R 984892 CDS YP_006015562.1 386319399 12611214 complement(1491900..1492268) 1 NC_017568.1 identified by match to protein family HMM PF00376; glutamine synthetase 1492268 glnR 12611214 glnR Staphylococcus pseudintermedius ED99 glutamine synthetase YP_006015562.1 1491900 R 984892 CDS YP_006015563.1 386319400 12611215 complement(1492444..1493691) 1 NC_017568.1 identified by match to protein family HMM PF06838; aluminum resistance protein 1493691 12611215 SPSE_1465 Staphylococcus pseudintermedius ED99 aluminum resistance protein YP_006015563.1 1492444 R 984892 CDS YP_006015564.1 386319401 12611216 complement(1493709..1494941) 1 NC_017568.1 identified by match to protein family HMM PF01926, match to protein family HMM PF04471, match to protein family HMM TIGR03156; GTP-binding protein 1494941 12611216 SPSE_1466 Staphylococcus pseudintermedius ED99 GTP-binding protein YP_006015564.1 1493709 R 984892 CDS YP_006015565.1 386319402 12611217 1495047..1495520 1 NC_017568.1 identified by match to protein family HMM PF00255; glutathione peroxidase 1495520 bsaA 12611217 bsaA Staphylococcus pseudintermedius ED99 glutathione peroxidase YP_006015565.1 1495047 D 984892 CDS YP_006015566.1 386319403 12611218 complement(1495674..1495802) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1495802 12611218 SPSE_1468 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015566.1 1495674 R 984892 CDS YP_006015567.1 386319404 12611219 complement(1495799..1495912) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1495912 12611219 SPSE_1469 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015567.1 1495799 R 984892 CDS YP_006015568.1 386319405 12611220 1496278..1497231 1 NC_017568.1 identified by match to protein family HMM PF00561; putative lysophospholipase 1497231 12611220 SPSE_1470 Staphylococcus pseudintermedius ED99 putative lysophospholipase YP_006015568.1 1496278 D 984892 CDS YP_006015569.1 386319406 12611221 1497218..1498174 1 NC_017568.1 identified by match to protein family HMM PF01715, match to protein family HMM TIGR00174; tRNA delta(2)-isopentenylpyrophosphate transferase 1498174 miaA 12611221 miaA Staphylococcus pseudintermedius ED99 tRNA delta(2)-isopentenylpyrophosphate transferase YP_006015569.1 1497218 D 984892 CDS YP_006015570.1 386319407 12611222 1498167..1498373 1 NC_017568.1 identified by match to protein family HMM PF01423, match to protein family HMM TIGR02383; RNA chaperone Hfq 1498373 hfq 12611222 hfq Staphylococcus pseudintermedius ED99 RNA chaperone Hfq YP_006015570.1 1498167 D 984892 CDS YP_006015571.1 386319408 12611223 complement(1498666..1500336) 1 NC_017568.1 identified by match to protein family HMM PF01266; glycerol-3-phosphate dehydrogenase 1500336 glpD 12611223 glpD Staphylococcus pseudintermedius ED99 glycerol-3-phosphate dehydrogenase YP_006015571.1 1498666 R 984892 CDS YP_006015572.1 386319409 12611224 complement(1500463..1501965) 1 NC_017568.1 identified by match to protein family HMM PF00370, match to protein family HMM PF02782, match to protein family HMM TIGR01311; glycerol kinase 1501965 glpK 12611224 glpK Staphylococcus pseudintermedius ED99 glycerol kinase YP_006015572.1 1500463 R 984892 CDS YP_006015573.1 386319410 12611225 complement(1502261..1503076) 1 NC_017568.1 identified by match to protein family HMM PF00230, match to protein family HMM TIGR00861; glycerol uptake facilitator protein 1503076 glpF 12611225 glpF Staphylococcus pseudintermedius ED99 glycerol uptake facilitator protein YP_006015573.1 1502261 R 984892 CDS YP_006015574.1 386319411 12611226 complement(1503315..1504343) 1 NC_017568.1 identified by match to protein family HMM PF02016; LD-carboxypeptidase family protein 1504343 12611226 SPSE_1476 Staphylococcus pseudintermedius ED99 LD-carboxypeptidase family protein YP_006015574.1 1503315 R 984892 CDS YP_006015575.1 386319412 12611227 complement(1504371..1504904) 1 NC_017568.1 identified by match to protein family HMM PF04309; glycerol uptake operon antiterminator regulatory protein 1504904 glpP 12611227 glpP Staphylococcus pseudintermedius ED99 glycerol uptake operon antiterminator regulatory protein YP_006015575.1 1504371 R 984892 CDS YP_006015576.1 386319413 12611228 complement(1504916..1506856) 1 NC_017568.1 identified by match to protein family HMM PF01119, match to protein family HMM PF02518, match to protein family HMM PF08676, match to protein family HMM TIGR00585; DNA mismatch repair protein MutL 1506856 mutL 12611228 mutL Staphylococcus pseudintermedius ED99 DNA mismatch repair protein MutL YP_006015576.1 1504916 R 984892 CDS YP_006015577.1 386319414 12611229 complement(1506871..1509468) 1 NC_017568.1 identified by match to protein family HMM PF00488, match to protein family HMM PF01624, match to protein family HMM PF05188, match to protein family HMM PF05190, match to protein family HMM PF05192, match to protein family HMM TIGR01070; DNA mismatch repair protein MutS 1509468 mutS 12611229 mutS Staphylococcus pseudintermedius ED99 DNA mismatch repair protein MutS YP_006015577.1 1506871 R 984892 CDS YP_006015578.1 386319415 12611230 complement(1510124..1510633) 1 NC_017568.1 identified by match to protein family HMM PF09512, match to protein family HMM TIGR02359; thiazole transporter ThiW 1510633 thiW 12611230 thiW Staphylococcus pseudintermedius ED99 thiazole transporter ThiW YP_006015578.1 1510124 R 984892 CDS YP_006015579.1 386319416 12611231 complement(1510688..1511065) 1 NC_017568.1 hypothetical protein 1511065 12611231 SPSE_1481 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015579.1 1510688 R 984892 CDS YP_006015580.1 386319417 12611232 complement(1511066..1512616) 1 NC_017568.1 identified by match to protein family HMM PF00919, match to protein family HMM PF01938, match to protein family HMM PF04055, match to protein family HMM TIGR00089, match to protein family HMM TIGR01574; tRNA-I(6)A37 thiotransferase enzyme MiaB 1512616 miaB 12611232 miaB Staphylococcus pseudintermedius ED99 tRNA-I(6)A37 thiotransferase enzyme MiaB YP_006015580.1 1511066 R 984892 CDS YP_006015581.1 386319418 12611233 complement(1512720..1513019) 1 NC_017568.1 hypothetical protein 1513019 12611233 SPSE_1483 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015581.1 1512720 R 984892 CDS YP_006015582.1 386319419 12611234 complement(1513278..1514144) 1 NC_017568.1 identified by match to protein family HMM PF02775, match to protein family HMM TIGR02177; ferredoxin oxidoreductase subunit beta 1514144 12611234 SPSE_1484 Staphylococcus pseudintermedius ED99 ferredoxin oxidoreductase subunit beta YP_006015582.1 1513278 R 984892 CDS YP_006015583.1 386319420 12611235 complement(1514145..1515905) 1 NC_017568.1 identified by match to protein family HMM PF01558, match to protein family HMM PF01855, match to protein family HMM TIGR03710; pyruvate ferredoxin oxidoreductase alpha chain 1515905 12611235 SPSE_1485 Staphylococcus pseudintermedius ED99 pyruvate ferredoxin oxidoreductase alpha chain YP_006015583.1 1514145 R 984892 CDS YP_006015584.1 386319421 12611236 complement(1516058..1516852) 1 NC_017568.1 identified by match to protein family HMM PF00149, match to protein family HMM TIGR00282; hypothetical protein 1516852 12611236 SPSE_1486 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015584.1 1516058 R 984892 CDS YP_006015585.1 386319422 12611237 complement(1517042..1517167) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1517167 12611237 SPSE_1487 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015585.1 1517042 R 984892 CDS YP_006015586.1 386319423 12611238 complement(1517182..1519356) 1 NC_017568.1 identified by match to protein family HMM PF00122, match to protein family HMM PF00403, match to protein family HMM PF00702, match to protein family HMM TIGR01494, match to protein family HMM TIGR01512, match to protein family HMM TIGR01525; cadmium-translocating P-type ATPase 1519356 cadA 12611238 cadA Staphylococcus pseudintermedius ED99 cadmium-translocating P-type ATPase YP_006015586.1 1517182 R 984892 CDS YP_006015587.1 386319424 12611239 complement(1519340..1519720) 1 NC_017568.1 identified by match to protein family HMM PF01022; cadmium efflux system accessory protein 1519720 cadC 12611239 cadC Staphylococcus pseudintermedius ED99 cadmium efflux system accessory protein YP_006015587.1 1519340 R 984892 CDS YP_006015588.1 386319425 12611240 1519918..1520136 1 NC_017568.1 hypothetical protein 1520136 12611240 SPSE_1490 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015588.1 1519918 D 984892 CDS YP_006015589.1 386319426 12611241 complement(1520259..1521818) 1 NC_017568.1 identified by match to protein family HMM PF00013, match to protein family HMM PF01966, match to protein family HMM PF08668, match to protein family HMM TIGR00277, match to protein family HMM TIGR03319; phosphodiesterase 1521818 cvfA 12611241 cvfA Staphylococcus pseudintermedius ED99 phosphodiesterase YP_006015589.1 1520259 R 984892 CDS YP_006015590.1 386319427 12611242 1521853..1521969 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1521969 12611242 SPSE_1492 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015590.1 1521853 D 984892 CDS YP_006015591.1 386319428 12611243 complement(1522045..1523088) 1 NC_017568.1 identified by match to protein family HMM PF00154, match to protein family HMM TIGR02012; protein RecA 1523088 recA 12611243 recA Staphylococcus pseudintermedius ED99 protein RecA YP_006015591.1 1522045 R 984892 CDS YP_006015592.1 386319429 12611244 complement(1523227..1524402) 1 NC_017568.1 identified by match to protein family HMM PF00994, match to protein family HMM TIGR00177, match to protein family HMM TIGR00200; competence-damage inducible protein 1524402 12611244 SPSE_1494 Staphylococcus pseudintermedius ED99 competence-damage inducible protein YP_006015592.1 1523227 R 984892 CDS YP_006015593.1 386319430 12611245 complement(1524623..1525207) 1 NC_017568.1 identified by match to protein family HMM PF01066, match to protein family HMM TIGR00560; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1525207 pgsA 12611245 pgsA Staphylococcus pseudintermedius ED99 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_006015593.1 1524623 R 984892 CDS YP_006015594.1 386319431 12611246 complement(1525249..1525644) 1 NC_017568.1 transcriptional regulator 1525644 12611246 SPSE_1496 Staphylococcus pseudintermedius ED99 transcriptional regulator YP_006015594.1 1525249 R 984892 CDS YP_006015595.1 386319432 12611247 complement(1525663..1526508) 1 NC_017568.1 identified by match to protein family HMM PF01842; ACT domain-containing protein 1526508 12611247 SPSE_1497 Staphylococcus pseudintermedius ED99 ACT domain-containing protein YP_006015595.1 1525663 R 984892 CDS YP_006015596.1 386319433 12611248 complement(1526565..1527269) 1 NC_017568.1 identified by match to protein family HMM PF00106, match to protein family HMM PF01370; short chain dehydrogenase/reductase family oxidoreductase 1527269 12611248 SPSE_1498 Staphylococcus pseudintermedius ED99 short chain dehydrogenase/reductase family oxidoreductase YP_006015596.1 1526565 R 984892 CDS YP_006015597.1 386319434 12611249 complement(1527266..1528555) 1 NC_017568.1 identified by match to protein family HMM PF00675, match to protein family HMM PF05193; peptidase, M16 family 1528555 12611249 SPSE_1499 Staphylococcus pseudintermedius ED99 peptidase, M16 family YP_006015597.1 1527266 R 984892 CDS YP_006015598.1 386319435 12611250 complement(1528548..1529822) 1 NC_017568.1 identified by match to protein family HMM PF05193; peptidase, M16 family 1529822 12611250 SPSE_1500 Staphylococcus pseudintermedius ED99 peptidase, M16 family YP_006015598.1 1528548 R 984892 CDS YP_006015599.1 386319436 12611251 complement(1529856..1530572) 1 NC_017568.1 identified by match to protein family HMM PF07702; GntR family transcriptional regulator 1530572 12611251 SPSE_1501 Staphylococcus pseudintermedius ED99 GntR family transcriptional regulator YP_006015599.1 1529856 R 984892 CDS YP_006015600.1 386319437 12611252 complement(1530578..1532941) 1 NC_017568.1 identified by match to protein family HMM PF01580, match to protein family HMM PF09397; DNA translocase ftsK 1532941 ftsK 12611252 ftsK Staphylococcus pseudintermedius ED99 DNA translocase ftsK YP_006015600.1 1530578 R 984892 CDS YP_006015601.1 386319438 12611253 complement(1533080..1534753) 1 NC_017568.1 identified by match to protein family HMM PF00753, match to protein family HMM PF07521, match to protein family HMM TIGR00649; metallo-beta-lactamase superfamily protein 1534753 12611253 SPSE_1503 Staphylococcus pseudintermedius ED99 metallo-beta-lactamase superfamily protein YP_006015601.1 1533080 R 984892 CDS YP_006015602.1 386319439 12611254 complement(1534983..1535144) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1535144 12611254 SPSE_1504 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015602.1 1534983 R 984892 CDS YP_006015603.1 386319440 12611255 complement(1535264..1537357) 1 NC_017568.1 identified by match to protein family HMM PF00013, match to protein family HMM PF00575, match to protein family HMM PF01138, match to protein family HMM PF03725, match to protein family HMM PF03726, match to protein family HMM TIGR03591; polyribonucleotide nucleotidyltransferase 1537357 pnp 12611255 pnp Staphylococcus pseudintermedius ED99 polyribonucleotide nucleotidyltransferase YP_006015603.1 1535264 R 984892 CDS YP_006015604.1 386319441 12611256 complement(1537516..1537785) 1 NC_017568.1 identified by match to protein family HMM PF00312, match to protein family HMM TIGR00952; 30S ribosomal protein S15 1537785 rpsO 12611256 rpsO Staphylococcus pseudintermedius ED99 30S ribosomal protein S15 YP_006015604.1 1537516 R 984892 CDS YP_006015605.1 386319442 12611257 complement(1537886..1538857) 1 NC_017568.1 identified by match to protein family HMM PF01687, match to protein family HMM PF06574, match to protein family HMM TIGR00083; riboflavin biosynthesis protein RibF 1538857 ribF 12611257 ribF Staphylococcus pseudintermedius ED99 riboflavin biosynthesis protein RibF YP_006015605.1 1537886 R 984892 CDS YP_006015606.1 386319443 12611258 complement(1538872..1539789) 1 NC_017568.1 identified by match to protein family HMM PF01509, match to protein family HMM TIGR00431; tRNA pseudouridine synthase B 1539789 truB 12611258 truB Staphylococcus pseudintermedius ED99 tRNA pseudouridine synthase B YP_006015606.1 1538872 R 984892 CDS YP_006015607.1 386319444 12611259 complement(1539874..1540218) 1 NC_017568.1 identified by match to protein family HMM PF02033, match to protein family HMM TIGR00082; ribosome-binding factor A 1540218 rbfA 12611259 rbfA Staphylococcus pseudintermedius ED99 ribosome-binding factor A YP_006015607.1 1539874 R 984892 CDS YP_006015608.1 386319445 12611260 complement(1540963..1541202) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1541202 12611260 SPSE_1510 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015608.1 1540963 R 984892 CDS YP_006015609.1 386319446 12611261 complement(1541417..1543555) 1 NC_017568.1 identified by match to protein family HMM PF00009, match to protein family HMM PF01926, match to protein family HMM PF03144, match to protein family HMM PF04760, match to protein family HMM TIGR00231, match to protein family HMM TIGR00487; translation initiation factor IF-2 1543555 infB 12611261 infB Staphylococcus pseudintermedius ED99 translation initiation factor IF-2 YP_006015609.1 1541417 R 984892 CDS YP_006015610.1 386319447 12611262 complement(1543572..1543877) 1 NC_017568.1 identified by match to protein family HMM PF01248; 30S ribosomal protein L7 Ae 1543877 12611262 SPSE_1512 Staphylococcus pseudintermedius ED99 30S ribosomal protein L7 Ae YP_006015610.1 1543572 R 984892 CDS YP_006015611.1 386319448 12611263 complement(1543874..1544161) 1 NC_017568.1 identified by match to protein family HMM PF04296; hypothetical protein 1544161 12611263 SPSE_1513 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015611.1 1543874 R 984892 CDS YP_006015612.1 386319449 12611264 complement(1544173..1545351) 1 NC_017568.1 identified by match to protein family HMM PF00013, match to protein family HMM PF00575, match to protein family HMM PF08529, match to protein family HMM TIGR01953; transcription termination factor NusA 1545351 nusA 12611264 nusA Staphylococcus pseudintermedius ED99 transcription termination factor NusA YP_006015612.1 1544173 R 984892 CDS YP_006015613.1 386319450 12611265 complement(1545372..1545839) 1 NC_017568.1 identified by match to protein family HMM PF02576; hypothetical protein 1545839 12611265 SPSE_1515 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015613.1 1545372 R 984892 CDS YP_006015614.1 386319451 12611266 complement(1545964..1550271) 1 NC_017568.1 identified by match to protein family HMM PF00929, match to protein family HMM PF01336, match to protein family HMM PF02811, match to protein family HMM PF07733, match to protein family HMM TIGR00573, match to protein family HMM TIGR01405; DNA polymerase III subunit alpha 1550271 polC 12611266 polC Staphylococcus pseudintermedius ED99 DNA polymerase III subunit alpha YP_006015614.1 1545964 R 984892 CDS YP_006015615.1 386319452 12611267 1550822..1550968 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1550968 12611267 SPSE_1517 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015615.1 1550822 D 984892 CDS YP_006015616.1 386319453 12611268 complement(1551188..1552891) 1 NC_017568.1 identified by match to protein family HMM PF00587, match to protein family HMM PF03129, match to protein family HMM PF04073, match to protein family HMM TIGR00409; prolyl-tRNA synthetase 1552891 proS 12611268 proS Staphylococcus pseudintermedius ED99 prolyl-tRNA synthetase YP_006015616.1 1551188 R 984892 CDS YP_006015617.1 386319454 12611269 complement(1552916..1554196) 1 NC_017568.1 identified by match to protein family HMM PF02163, match to protein family HMM TIGR00054; membrane-associated zinc metalloprotease 1554196 12611269 SPSE_1519 Staphylococcus pseudintermedius ED99 membrane-associated zinc metalloprotease YP_006015617.1 1552916 R 984892 CDS YP_006015618.1 386319455 12611270 complement(1554203..1555333) 1 NC_017568.1 identified by match to protein family HMM PF02670, match to protein family HMM PF08436, match to protein family HMM TIGR00243; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1555333 dxr 12611270 dxr Staphylococcus pseudintermedius ED99 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_006015618.1 1554203 R 984892 CDS YP_006015619.1 386319456 12611271 complement(1555350..1556132) 1 NC_017568.1 identified by match to protein family HMM PF01148; phosphatidate cytidylyltransferase 1556132 cdsA 12611271 cdsA Staphylococcus pseudintermedius ED99 phosphatidate cytidylyltransferase YP_006015619.1 1555350 R 984892 CDS YP_006015620.1 386319457 12611272 complement(1556147..1556908) 1 NC_017568.1 identified by match to protein family HMM PF01255, match to protein family HMM TIGR00055; undecaprenyl diphosphate synthase 1556908 uppS 12611272 uppS Staphylococcus pseudintermedius ED99 undecaprenyl diphosphate synthase YP_006015620.1 1556147 R 984892 CDS YP_006015621.1 386319458 12611273 complement(1557152..1557706) 1 NC_017568.1 identified by match to protein family HMM PF01765, match to protein family HMM TIGR00496; ribosome recycling factor 1557706 frr 12611273 frr Staphylococcus pseudintermedius ED99 ribosome recycling factor YP_006015621.1 1557152 R 984892 CDS YP_006015622.1 386319459 12611274 complement(1557724..1558446) 1 NC_017568.1 identified by match to protein family HMM PF00696, match to protein family HMM TIGR02075; uridylate kinase 1558446 pyrH 12611274 pyrH Staphylococcus pseudintermedius ED99 uridylate kinase YP_006015622.1 1557724 R 984892 CDS YP_006015623.1 386319460 12611275 complement(1558598..1559476) 1 NC_017568.1 identified by match to protein family HMM PF00627, match to protein family HMM PF00889, match to protein family HMM TIGR00116; translation elongation factor Ts 1559476 tsf 12611275 tsf Staphylococcus pseudintermedius ED99 translation elongation factor Ts YP_006015623.1 1558598 R 984892 CDS YP_006015624.1 386319461 12611276 complement(1559566..1560363) 1 NC_017568.1 identified by match to protein family HMM PF00318, match to protein family HMM TIGR01011; 30S ribosomal protein S2 1560363 rpsB 12611276 rpsB Staphylococcus pseudintermedius ED99 30S ribosomal protein S2 YP_006015624.1 1559566 R 984892 CDS YP_006015625.1 386319462 12611277 complement(1560530..1561303) 1 NC_017568.1 identified by match to protein family HMM PF06018, match to protein family HMM PF08222, match to protein family HMM TIGR02787; GTP-sensing transcriptional pleiotropic repressor CodY 1561303 codY 12611277 codY Staphylococcus pseudintermedius ED99 GTP-sensing transcriptional pleiotropic repressor CodY YP_006015625.1 1560530 R 984892 CDS YP_006015626.1 386319463 12611278 complement(1561323..1562732) 1 NC_017568.1 identified by match to protein family HMM PF07724, match to protein family HMM TIGR00390; ATP-dependent carboxylate-amine ligase 1562732 hslU 12611278 hslU Staphylococcus pseudintermedius ED99 ATP-dependent carboxylate-amine ligase YP_006015626.1 1561323 R 984892 CDS YP_006015627.1 386319464 12611279 complement(1562747..1563289) 1 NC_017568.1 identified by match to protein family HMM PF00227, match to protein family HMM TIGR03692; ATP-dependent protease HslVU, peptidase subunit 1563289 hslV 12611279 hslV Staphylococcus pseudintermedius ED99 ATP-dependent protease HslVU, peptidase subunit YP_006015627.1 1562747 R 984892 CDS YP_006015628.1 386319465 12611280 complement(1563296..1564186) 1 NC_017568.1 identified by match to protein family HMM PF00589, match to protein family HMM PF02899, match to protein family HMM TIGR02224; tyrosine recombinase XerC 1564186 xerC 12611280 xerC Staphylococcus pseudintermedius ED99 tyrosine recombinase XerC YP_006015628.1 1563296 R 984892 CDS YP_006015629.1 386319466 12611281 complement(1564307..1565611) 1 NC_017568.1 identified by match to protein family HMM PF01134, match to protein family HMM TIGR00137; tRNA (uracil-5-)-methyltransferase 1565611 trmFO 12611281 trmFO Staphylococcus pseudintermedius ED99 tRNA (uracil-5-)-methyltransferase YP_006015629.1 1564307 R 984892 CDS YP_006015630.1 386319467 12611282 complement(1565639..1567708) 1 NC_017568.1 identified by match to protein family HMM PF01131, match to protein family HMM PF01396, match to protein family HMM PF01751, match to protein family HMM TIGR01051; DNA topoisomerase I 1567708 topA 12611282 topA Staphylococcus pseudintermedius ED99 DNA topoisomerase I YP_006015630.1 1565639 R 984892 CDS YP_006015631.1 386319468 12611283 complement(1567792..1568679) 1 NC_017568.1 identified by match to protein family HMM PF02481, match to protein family HMM TIGR00732; DprA SMF protein putative DNA processing factor 1568679 dprA 12611283 dprA Staphylococcus pseudintermedius ED99 DprA SMF protein putative DNA processing factor YP_006015631.1 1567792 R 984892 CDS YP_006015632.1 386319469 12611284 complement(1568918..1569823) 1 NC_017568.1 identified by match to protein family HMM PF00549, match to protein family HMM PF02629, match to protein family HMM TIGR01019; succinate-CoA ligase alpha subunit 1569823 sucD 12611284 sucD Staphylococcus pseudintermedius ED99 succinate-CoA ligase alpha subunit YP_006015632.1 1568918 R 984892 CDS YP_006015633.1 386319470 12611285 complement(1569845..1571011) 1 NC_017568.1 identified by match to protein family HMM PF00549, match to protein family HMM PF08442, match to protein family HMM TIGR01016; succinyl-CoA synthetase subunit beta 1571011 sucC 12611285 sucC Staphylococcus pseudintermedius ED99 succinyl-CoA synthetase subunit beta YP_006015633.1 1569845 R 984892 CDS YP_006015634.1 386319471 12611286 complement(1571278..1571553) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1571553 12611286 SPSE_1536 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015634.1 1571278 R 984892 CDS YP_006015635.1 386319472 12611287 complement(1571645..1572430) 1 NC_017568.1 identified by match to protein family HMM PF01351; ribonuclease HII 1572430 rnhB 12611287 rnhB Staphylococcus pseudintermedius ED99 ribonuclease HII YP_006015635.1 1571645 R 984892 CDS YP_006015636.1 386319473 12611288 complement(1572423..1573295) 1 NC_017568.1 identified by match to protein family HMM PF01926, match to protein family HMM TIGR03596; GTP-binding protein 1573295 12611288 SPSE_1538 Staphylococcus pseudintermedius ED99 GTP-binding protein YP_006015636.1 1572423 R 984892 CDS YP_006015637.1 386319474 12611289 1573523..1573906 1 NC_017568.1 identified by match to protein family HMM PF04138; GtrA-like protein 1573906 12611289 SPSE_1539 Staphylococcus pseudintermedius ED99 GtrA-like protein YP_006015637.1 1573523 D 984892 CDS YP_006015638.1 386319475 12611290 1573926..1576535 1 NC_017568.1 identified by match to protein family HMM PF09586; hypothetical protein 1576535 12611290 SPSE_1540 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015638.1 1573926 D 984892 CDS YP_006015639.1 386319476 12611291 1576532..1579126 1 NC_017568.1 identified by match to protein family HMM PF09586; hypothetical protein 1579126 12611291 SPSE_1541 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015639.1 1576532 D 984892 CDS YP_006015640.1 386319477 12611292 1579353..1579985 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1579985 12611292 SPSE_1542 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015640.1 1579353 D 984892 CDS YP_006015641.1 386319478 12611293 complement(1580150..1580803) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1580803 12611293 SPSE_1543 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015641.1 1580150 R 984892 CDS YP_006015642.1 386319479 12611294 complement(1580870..1581268) 1 NC_017568.1 hypothetical protein 1581268 12611294 SPSE_1544 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015642.1 1580870 R 984892 CDS YP_006015643.1 386319480 12611295 complement(1581269..1581700) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1581700 12611295 SPSE_1545 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015643.1 1581269 R 984892 CDS YP_006015644.1 386319481 12611296 1582201..1582338 1 NC_017568.1 identified by match to protein family HMM PF05480; putative hemolysin-H1C 1582338 12611296 SPSE_1546 Staphylococcus pseudintermedius ED99 putative hemolysin-H1C YP_006015644.1 1582201 D 984892 CDS YP_006015645.1 386319482 12611297 complement(1582606..1582956) 1 NC_017568.1 identified by match to protein family HMM PF01245, match to protein family HMM TIGR01024; 50S ribosomal protein L19 1582956 rplS 12611297 rplS Staphylococcus pseudintermedius ED99 50S ribosomal protein L19 YP_006015645.1 1582606 R 984892 CDS YP_006015646.1 386319483 12611298 complement(1583064..1583795) 1 NC_017568.1 identified by match to protein family HMM PF01746, match to protein family HMM TIGR00088; tRNA (guanine-N1)-methyltransferase 1583795 trmD 12611298 trmD Staphylococcus pseudintermedius ED99 tRNA (guanine-N1)-methyltransferase YP_006015646.1 1583064 R 984892 CDS YP_006015647.1 386319484 12611299 complement(1583792..1584295) 1 NC_017568.1 identified by match to protein family HMM PF01782, match to protein family HMM PF05239, match to protein family HMM TIGR02273; 16S rRNA processing protein RimM 1584295 rimM 12611299 rimM Staphylococcus pseudintermedius ED99 16S rRNA processing protein RimM YP_006015647.1 1583792 R 984892 CDS YP_006015648.1 386319485 12611300 complement(1584618..1584893) 1 NC_017568.1 identified by match to protein family HMM PF00886, match to protein family HMM TIGR00002; 30S ribosomal protein S16 1584893 rpsP 12611300 rpsP Staphylococcus pseudintermedius ED99 30S ribosomal protein S16 YP_006015648.1 1584618 R 984892 CDS YP_006015649.1 386319486 12611301 complement(1585107..1585778) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1585778 12611301 SPSE_1552 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015649.1 1585107 R 984892 CDS YP_006015650.1 386319487 12611302 complement(1585823..1586116) 1 NC_017568.1 type-1 restriction enzyme R protein, truncated 1586116 12611302 SPSE_1553 Staphylococcus pseudintermedius ED99 type-1 restriction enzyme R protein, truncated YP_006015650.1 1585823 R 984892 CDS YP_006015651.1 386319488 12611303 complement(1586908..1588098) 1 NC_017568.1 identified by match to protein family HMM PF07690; major facilitator family transporter 1588098 12611303 SPSE_1554 Staphylococcus pseudintermedius ED99 major facilitator family transporter YP_006015651.1 1586908 R 984892 CDS YP_006015652.1 386319489 12611304 complement(1588281..1589489) 1 NC_017568.1 identified by match to protein family HMM PF07690; major facilitator family transporter 1589489 12611304 SPSE_1555 Staphylococcus pseudintermedius ED99 major facilitator family transporter YP_006015652.1 1588281 R 984892 CDS YP_006015653.1 386319490 12611305 complement(1589823..1590224) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1590224 12611305 SPSE_1556 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015653.1 1589823 R 984892 CDS YP_006015654.1 386319491 12611306 complement(1590547..1591089) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1591089 12611306 SPSE_1557 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015654.1 1590547 R 984892 CDS YP_006015655.1 386319492 12611307 complement(1591067..1591633) 1 NC_017568.1 hypothetical protein 1591633 12611307 SPSE_1558 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015655.1 1591067 R 984892 CDS YP_006015656.1 386319493 12611308 complement(1591857..1592300) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1592300 12611308 SPSE_1559 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015656.1 1591857 R 984892 CDS YP_006015657.1 386319494 12611309 complement(1592377..1592493) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1592493 12611309 SPSE_1560 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015657.1 1592377 R 984892 CDS YP_006015658.1 386319495 12611310 1592950..1593804 1 NC_017568.1 identified by match to protein family HMM TIGR01716; positive transcriptional regulator MutR family 1593804 12611310 SPSE_1561 Staphylococcus pseudintermedius ED99 positive transcriptional regulator MutR family YP_006015658.1 1592950 D 984892 CDS YP_006015659.1 386319496 12611311 1593971..1594183 1 NC_017568.1 hypothetical protein 1594183 12611311 SPSE_1562 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015659.1 1593971 D 984892 CDS YP_006015660.1 386319497 12611312 complement(1594702..1596069) 1 NC_017568.1 identified by match to protein family HMM PF00448, match to protein family HMM PF02881, match to protein family HMM PF02978, match to protein family HMM TIGR00959; signal recognition particle protein 1596069 ffh 12611312 ffh Staphylococcus pseudintermedius ED99 signal recognition particle protein YP_006015660.1 1594702 R 984892 CDS YP_006015661.1 386319498 12611313 complement(1596083..1596418) 1 NC_017568.1 identified by match to protein family HMM PF04297; signal recognition particle associated protein 1596418 12611313 SPSE_1564 Staphylococcus pseudintermedius ED99 signal recognition particle associated protein YP_006015661.1 1596083 R 984892 CDS YP_006015662.1 386319499 12611314 complement(1596422..1597621) 1 NC_017568.1 identified by match to protein family HMM PF00448, match to protein family HMM PF02881, match to protein family HMM TIGR00064; cell division protein FtsY 1597621 12611314 SPSE_1565 Staphylococcus pseudintermedius ED99 cell division protein FtsY YP_006015662.1 1596422 R 984892 CDS YP_006015663.1 386319500 12611315 complement(1597623..1601195) 1 NC_017568.1 identified by match to protein family HMM PF02463, match to protein family HMM PF06470, match to protein family HMM TIGR02168; chromosome segregation protein SMC 1601195 smc 12611315 smc Staphylococcus pseudintermedius ED99 chromosome segregation protein SMC YP_006015663.1 1597623 R 984892 CDS YP_006015664.1 386319501 12611316 complement(1601199..1601930) 1 NC_017568.1 identified by match to protein family HMM PF00035, match to protein family HMM PF00636, match to protein family HMM TIGR02191; ribonuclease III 1601930 rnc 12611316 rnc Staphylococcus pseudintermedius ED99 ribonuclease III YP_006015664.1 1601199 R 984892 CDS YP_006015665.1 386319502 12611317 complement(1602827..1603060) 1 NC_017568.1 identified by match to protein family HMM PF00550, match to protein family HMM TIGR00517; acyl carrier protein 1603060 acpP 12611317 acpP Staphylococcus pseudintermedius ED99 acyl carrier protein YP_006015665.1 1602827 R 984892 CDS YP_006015666.1 386319503 12611318 complement(1603289..1604026) 1 NC_017568.1 identified by match to protein family HMM PF00106, match to protein family HMM PF08659, match to protein family HMM TIGR01830; 3-oxoacyl-ACP reductase 1604026 fabG 12611318 fabG Staphylococcus pseudintermedius ED99 3-oxoacyl-ACP reductase YP_006015666.1 1603289 R 984892 CDS YP_006015667.1 386319504 12611319 complement(1604019..1604945) 1 NC_017568.1 identified by match to protein family HMM PF00698, match to protein family HMM TIGR00128; malonyl CoA-acyl carrier protein transacylase 1604945 fabD 12611319 fabD Staphylococcus pseudintermedius ED99 malonyl CoA-acyl carrier protein transacylase YP_006015667.1 1604019 R 984892 CDS YP_006015668.1 386319505 12611320 complement(1604938..1605924) 1 NC_017568.1 identified by match to protein family HMM PF02504, match to protein family HMM TIGR00182; fatty acid/phospholipid synthesis protein PlsX 1605924 plsX 12611320 plsX Staphylococcus pseudintermedius ED99 fatty acid/phospholipid synthesis protein PlsX YP_006015668.1 1604938 R 984892 CDS YP_006015669.1 386319506 12611321 complement(1605926..1606513) 1 NC_017568.1 fatty acid biosynthesis transcriptional regulator 1606513 fapR 12611321 fapR Staphylococcus pseudintermedius ED99 fatty acid biosynthesis transcriptional regulator YP_006015669.1 1605926 R 984892 CDS YP_006015670.1 386319507 12611322 complement(1606613..1608658) 1 NC_017568.1 identified by match to protein family HMM PF00270, match to protein family HMM PF00271, match to protein family HMM PF01336, match to protein family HMM TIGR00643; ATP-dependent DNA helicase RecG 1608658 recG 12611322 recG Staphylococcus pseudintermedius ED99 ATP-dependent DNA helicase RecG YP_006015670.1 1606613 R 984892 CDS YP_006015671.1 386319508 12611323 complement(1608661..1609548) 1 NC_017568.1 identified by match to protein family HMM PF03313, match to protein family HMM TIGR00718; L-serine dehydratase, iron-sulfur-dependent, alpha subunit 2 1609548 sdaAA2 12611323 sdaAA2 Staphylococcus pseudintermedius ED99 L-serine dehydratase, iron-sulfur-dependent, alpha subunit 2 YP_006015671.1 1608661 R 984892 CDS YP_006015672.1 386319509 12611324 complement(1609549..1610214) 1 NC_017568.1 identified by match to protein family HMM PF01842, match to protein family HMM PF03315, match to protein family HMM TIGR00719; L-serine dehydratase, iron-sulfur-dependent, beta subunit 2 1610214 sdaAB2 12611324 sdaAB2 Staphylococcus pseudintermedius ED99 L-serine dehydratase, iron-sulfur-dependent, beta subunit 2 YP_006015672.1 1609549 R 984892 CDS YP_006015673.1 386319510 12611325 complement(1611197..1612861) 1 NC_017568.1 identified by match to protein family HMM PF02734, match to protein family HMM TIGR03599; glycerone kinase protein 1612861 12611325 SPSE_1576 Staphylococcus pseudintermedius ED99 glycerone kinase protein YP_006015673.1 1611197 R 984892 CDS YP_006015674.1 386319511 12611326 complement(1612874..1613248) 1 NC_017568.1 identified by match to protein family HMM PF03780; hypothetical protein 1613248 12611326 SPSE_1577 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015674.1 1612874 R 984892 CDS YP_006015675.1 386319512 12611327 1613581..1613769 1 NC_017568.1 identified by match to protein family HMM PF00830, match to protein family HMM TIGR00009; 50S ribosomal protein L28 1613769 rpmB 12611327 rpmB Staphylococcus pseudintermedius ED99 50S ribosomal protein L28 YP_006015675.1 1613581 D 984892 CDS YP_006015676.1 386319513 12611328 complement(1613840..1614481) 1 NC_017568.1 identified by match to protein family HMM PF04263, match to protein family HMM PF04265, match to protein family HMM TIGR01378; thiamine pyrophosphokinase 1614481 thiN 12611328 thiN Staphylococcus pseudintermedius ED99 thiamine pyrophosphokinase YP_006015676.1 1613840 R 984892 CDS YP_006015677.1 386319514 12611329 complement(1614481..1615131) 1 NC_017568.1 identified by match to protein family HMM PF00834, match to protein family HMM TIGR01163; ribulose-phosphate 3-epimerase 1615131 rpe 12611329 rpe Staphylococcus pseudintermedius ED99 ribulose-phosphate 3-epimerase YP_006015677.1 1614481 R 984892 CDS YP_006015678.1 386319515 12611330 complement(1615131..1616006) 1 NC_017568.1 identified by match to protein family HMM PF03193, match to protein family HMM TIGR00157; ribosome small subunit-dependent GTPase A 1616006 rsgA 12611330 rsgA Staphylococcus pseudintermedius ED99 ribosome small subunit-dependent GTPase A YP_006015678.1 1615131 R 984892 CDS YP_006015679.1 386319516 12611331 complement(1616188..1617456) 1 NC_017568.1 fatty acid beta-hydroxylase 1617456 12611331 SPSE_1582 Staphylococcus pseudintermedius ED99 fatty acid beta-hydroxylase YP_006015679.1 1616188 R 984892 CDS YP_006015680.1 386319517 12611332 complement(1618216..1620222) 1 NC_017568.1 identified by match to protein family HMM PF00069, match to protein family HMM PF03793; serine/threonine-protein kinase PrkC 1620222 12611332 SPSE_1583 Staphylococcus pseudintermedius ED99 serine/threonine-protein kinase PrkC YP_006015680.1 1618216 R 984892 CDS YP_006015681.1 386319518 12611333 complement(1620219..1620962) 1 NC_017568.1 identified by match to protein family HMM PF00481; protein phosphatase PrpC 1620962 prpC 12611333 prpC Staphylococcus pseudintermedius ED99 protein phosphatase PrpC YP_006015681.1 1620219 R 984892 CDS YP_006015682.1 386319519 12611334 complement(1620969..1622063) 1 NC_017568.1 identified by match to protein family HMM PF04055, match to protein family HMM TIGR00048; radical SAM enzyme, Cfr family 1622063 12611334 SPSE_1585 Staphylococcus pseudintermedius ED99 radical SAM enzyme, Cfr family YP_006015682.1 1620969 R 984892 CDS YP_006015683.1 386319520 12611335 complement(1622069..1623370) 1 NC_017568.1 identified by match to protein family HMM PF01029, match to protein family HMM PF01189, match to protein family HMM TIGR00563; ribosomal RNA small subunit methyltransferase B 1623370 sun 12611335 sun Staphylococcus pseudintermedius ED99 ribosomal RNA small subunit methyltransferase B YP_006015683.1 1622069 R 984892 CDS YP_006015684.1 386319521 12611336 complement(1623371..1624303) 1 NC_017568.1 identified by match to protein family HMM PF00551, match to protein family HMM PF02911, match to protein family HMM TIGR00460; methionyl-tRNA formyltransferase 1624303 fmt 12611336 fmt Staphylococcus pseudintermedius ED99 methionyl-tRNA formyltransferase YP_006015684.1 1623371 R 984892 CDS YP_006015685.1 386319522 12611337 complement(1624296..1624781) 1 NC_017568.1 identified by match to protein family HMM PF01327, match to protein family HMM TIGR00079; peptide deformylase 1 1624781 defA 12611337 defA Staphylococcus pseudintermedius ED99 peptide deformylase 1 YP_006015685.1 1624296 R 984892 CDS YP_006015686.1 386319523 12611338 complement(1625038..1627446) 1 NC_017568.1 identified by match to protein family HMM PF00270, match to protein family HMM PF00271, match to protein family HMM PF04851, match to protein family HMM TIGR00595; primosomal protein N' 1627446 priA 12611338 priA Staphylococcus pseudintermedius ED99 primosomal protein N' YP_006015686.1 1625038 R 984892 CDS YP_006015687.1 386319524 12611339 complement(1627443..1628651) 1 NC_017568.1 identified by match to protein family HMM PF02441, match to protein family HMM PF04127, match to protein family HMM TIGR00521; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 1628651 coaBC 12611339 coaBC Staphylococcus pseudintermedius ED99 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase YP_006015687.1 1627443 R 984892 CDS YP_006015688.1 386319525 12611340 complement(1628953..1629162) 1 NC_017568.1 identified by match to protein family HMM PF01192, match to protein family HMM TIGR00690; DNA-directed RNA polymerase subunit omega 1629162 rpoZ 12611340 rpoZ Staphylococcus pseudintermedius ED99 DNA-directed RNA polymerase subunit omega YP_006015688.1 1628953 R 984892 CDS YP_006015689.1 386319526 12611341 complement(1629162..1629785) 1 NC_017568.1 identified by match to protein family HMM PF00625, match to protein family HMM TIGR03263; guanylate kinase 1629785 gmk 12611341 gmk Staphylococcus pseudintermedius ED99 guanylate kinase YP_006015689.1 1629162 R 984892 CDS YP_006015690.1 386319527 12611342 1629945..1631648 1 NC_017568.1 identified by match to protein family HMM PF05670, match to protein family HMM PF05833; fibronectin/fibrinogen binding protein 1631648 spsE 12611342 spsE Staphylococcus pseudintermedius ED99 fibronectin/fibrinogen binding protein YP_006015690.1 1629945 D 984892 CDS YP_006015691.1 386319528 12611343 complement(1631732..1632145) 1 NC_017568.1 identified by match to protein family HMM PF06983; 3-demethylubiquinone-9 3-methyltransferase domain protein 1632145 12611343 SPSE_1594 Staphylococcus pseudintermedius ED99 3-demethylubiquinone-9 3-methyltransferase domain protein YP_006015691.1 1631732 R 984892 CDS YP_006015692.1 386319529 12611344 complement(1632580..1633188) 1 NC_017568.1 identified by match to protein family HMM PF00156, match to protein family HMM TIGR00336; orotate phosphoribosyltransferase 1633188 pyrE 12611344 pyrE Staphylococcus pseudintermedius ED99 orotate phosphoribosyltransferase YP_006015692.1 1632580 R 984892 CDS YP_006015693.1 386319530 12611345 complement(1633176..1633880) 1 NC_017568.1 identified by match to protein family HMM PF00215, match to protein family HMM TIGR01740; orotidine 5'-phosphate decarboxylase 1633880 pyrF 12611345 pyrF Staphylococcus pseudintermedius ED99 orotidine 5'-phosphate decarboxylase YP_006015693.1 1633176 R 984892 CDS YP_006015694.1 386319531 12611346 complement(1633882..1634802) 1 NC_017568.1 identified by match to protein family HMM PF01180, match to protein family HMM TIGR01037; dihydroorotate dehydrogenase 1634802 pyrD 12611346 pyrD Staphylococcus pseudintermedius ED99 dihydroorotate dehydrogenase YP_006015694.1 1633882 R 984892 CDS YP_006015695.1 386319532 12611347 complement(1634799..1635563) 1 NC_017568.1 identified by match to protein family HMM PF00175, match to protein family HMM PF00970; dihydroorotate dehydrogenase electron transfer subunit 1635563 pyrK 12611347 pyrK Staphylococcus pseudintermedius ED99 dihydroorotate dehydrogenase electron transfer subunit YP_006015695.1 1634799 R 984892 CDS YP_006015696.1 386319533 12611348 complement(1635577..1638750) 1 NC_017568.1 identified by match to protein family HMM PF00289, match to protein family HMM PF01071, match to protein family HMM PF02142, match to protein family HMM PF02655, match to protein family HMM PF02786, match to protein family HMM PF02787, match to prote; carbamoyl-phosphate synthase large subunit 1638750 carB 12611348 carB Staphylococcus pseudintermedius ED99 carbamoyl-phosphate synthase large subunit YP_006015696.1 1635577 R 984892 CDS YP_006015697.1 386319534 12611349 complement(1638743..1639843) 1 NC_017568.1 identified by match to protein family HMM PF00117, match to protein family HMM PF00988, match to protein family HMM TIGR01368; carbamoyl-phosphate synthase small subunit 1639843 carA 12611349 carA Staphylococcus pseudintermedius ED99 carbamoyl-phosphate synthase small subunit YP_006015697.1 1638743 R 984892 CDS YP_006015698.1 386319535 12611350 complement(1639846..1641120) 1 NC_017568.1 identified by match to protein family HMM PF01979, match to protein family HMM PF07969, match to protein family HMM TIGR00857; dihydroorotase 1641120 pyrC 12611350 pyrC Staphylococcus pseudintermedius ED99 dihydroorotase YP_006015698.1 1639846 R 984892 CDS YP_006015699.1 386319536 12611351 complement(1641136..1642014) 1 NC_017568.1 identified by match to protein family HMM PF00185, match to protein family HMM PF02729, match to protein family HMM TIGR00670; aspartate carbamoyltransferase 1642014 pyrB 12611351 pyrB Staphylococcus pseudintermedius ED99 aspartate carbamoyltransferase YP_006015699.1 1641136 R 984892 CDS YP_006015700.1 386319537 12611352 complement(1642036..1643328) 1 NC_017568.1 identified by match to protein family HMM PF00860, match to protein family HMM TIGR00801; uracil permease 1643328 uraA 12611352 uraA Staphylococcus pseudintermedius ED99 uracil permease YP_006015700.1 1642036 R 984892 CDS YP_006015701.1 386319538 12611353 complement(1643506..1644030) 1 NC_017568.1 identified by match to protein family HMM PF00156; bifunctional; pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase 1644030 pyR 12611353 pyR Staphylococcus pseudintermedius ED99 pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase YP_006015701.1 1643506 R 984892 CDS YP_006015702.1 386319539 12611354 complement(1644316..1645233) 1 NC_017568.1 identified by match to protein family HMM PF00849, match to protein family HMM PF01479, match to protein family HMM TIGR00005; ribosomal large subunit pseudouridine synthase, RluA family 1645233 12611354 SPSE_1605 Staphylococcus pseudintermedius ED99 ribosomal large subunit pseudouridine synthase, RluA family YP_006015702.1 1644316 R 984892 CDS YP_006015703.1 386319540 12611355 complement(1645233..1645718) 1 NC_017568.1 identified by match to protein family HMM PF01252, match to protein family HMM TIGR00077; signal peptidase II 1645718 lspA 12611355 lspA Staphylococcus pseudintermedius ED99 signal peptidase II YP_006015703.1 1645233 R 984892 CDS YP_006015704.1 386319541 12611356 complement(1645972..1648719) 1 NC_017568.1 identified by match to protein family HMM PF00133, match to protein family HMM PF06827, match to protein family HMM PF08264, match to protein family HMM PF09334, match to protein family HMM TIGR00392; isoleucine-tRNA ligase 1648719 ileS 12611356 ileS Staphylococcus pseudintermedius ED99 isoleucine-tRNA ligase YP_006015704.1 1645972 R 984892 CDS YP_006015705.1 386319542 12611357 complement(1648920..1649519) 1 NC_017568.1 identified by match to protein family HMM PF05103, match to protein family HMM TIGR03544; putative cell-division initiation protein 1649519 12611357 SPSE_1608 Staphylococcus pseudintermedius ED99 putative cell-division initiation protein YP_006015705.1 1648920 R 984892 CDS YP_006015706.1 386319543 12611358 complement(1649543..1650313) 1 NC_017568.1 identified by match to protein family HMM PF01479; RNA-binding S4 domain-containing protein 1650313 12611358 SPSE_1609 Staphylococcus pseudintermedius ED99 RNA-binding S4 domain-containing protein YP_006015706.1 1649543 R 984892 CDS YP_006015707.1 386319544 12611359 complement(1650583..1651698) 1 NC_017568.1 identified by match to protein family HMM PF01408, match to protein family HMM PF02894; putative oxidoreductase 1651698 12611359 SPSE_1610 Staphylococcus pseudintermedius ED99 putative oxidoreductase YP_006015707.1 1650583 R 984892 CDS YP_006015708.1 386319545 12611360 complement(1651714..1653801) 1 NC_017568.1 identified by match to protein family HMM PF02012, match to protein family HMM PF02973; sialidase B 1653801 nanB 12611360 nanB Staphylococcus pseudintermedius ED99 sialidase B YP_006015708.1 1651714 R 984892 CDS YP_006015709.1 386319546 12611361 complement(1653816..1654265) 1 NC_017568.1 identified by match to protein family HMM PF04074, match to protein family HMM TIGR00022; hypothetical protein 1654265 12611361 SPSE_1612 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015709.1 1653816 R 984892 CDS YP_006015710.1 386319547 12611362 complement(1654284..1655825) 1 NC_017568.1 identified by match to protein family HMM PF00474; sodium:solute symporter family protein 1655825 12611362 SPSE_1613 Staphylococcus pseudintermedius ED99 sodium:solute symporter family protein YP_006015710.1 1654284 R 984892 CDS YP_006015711.1 386319548 12611363 complement(1655853..1656776) 1 NC_017568.1 identified by match to protein family HMM PF00701; N-acetylneuraminate lyase 1656776 12611363 SPSE_1614 Staphylococcus pseudintermedius ED99 N-acetylneuraminate lyase YP_006015711.1 1655853 R 984892 CDS YP_006015712.1 386319549 12611364 complement(1656873..1657700) 1 NC_017568.1 identified by match to protein family HMM PF01380, match to protein family HMM PF01418; RpiR family transcriptional regulator 1657700 12611364 SPSE_1615 Staphylococcus pseudintermedius ED99 RpiR family transcriptional regulator YP_006015712.1 1656873 R 984892 CDS YP_006015713.1 386319550 12611365 1658057..1658938 1 NC_017568.1 identified by match to protein family HMM PF06800; ribose uptake protein RbsU 1658938 rbsU 12611365 rbsU Staphylococcus pseudintermedius ED99 ribose uptake protein RbsU YP_006015713.1 1658057 D 984892 CDS YP_006015714.1 386319551 12611366 1658957..1659361 1 NC_017568.1 identified by match to protein family HMM PF05025; ribose ABC transporter permease 1659361 rbsD 12611366 rbsD Staphylococcus pseudintermedius ED99 ribose ABC transporter permease YP_006015714.1 1658957 D 984892 CDS YP_006015715.1 386319552 12611367 complement(1659593..1659886) 1 NC_017568.1 identified by match to protein family HMM PF02325; membrane protein 1659886 12611367 SPSE_1618 Staphylococcus pseudintermedius ED99 membrane protein YP_006015715.1 1659593 R 984892 CDS YP_006015716.1 386319553 12611368 complement(1659898..1660458) 1 NC_017568.1 identified by match to protein family HMM PF04472; hypothetical protein 1660458 12611368 SPSE_1619 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015716.1 1659898 R 984892 CDS YP_006015717.1 386319554 12611369 complement(1660464..1661138) 1 NC_017568.1 identified by match to protein family HMM TIGR00044; hypothetical protein 1661138 12611369 SPSE_1620 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015717.1 1660464 R 984892 CDS YP_006015718.1 386319555 12611370 complement(1661139..1661951) 1 NC_017568.1 identified by match to protein family HMM PF02578, match to protein family HMM TIGR00726; hypothetical protein 1661951 12611370 SPSE_1621 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015718.1 1661139 R 984892 CDS YP_006015719.1 386319556 12611371 complement(1662105..1663277) 1 NC_017568.1 identified by match to protein family HMM PF00091, match to protein family HMM PF03953, match to protein family HMM TIGR00065; cell division protein FtsZ 1663277 ftsZ 12611371 ftsZ Staphylococcus pseudintermedius ED99 cell division protein FtsZ YP_006015719.1 1662105 R 984892 CDS YP_006015720.1 386319557 12611372 complement(1663307..1664707) 1 NC_017568.1 identified by match to protein family HMM PF02491, match to protein family HMM TIGR01174; cell division protein FtsA 1664707 ftsA 12611372 ftsA Staphylococcus pseudintermedius ED99 cell division protein FtsA YP_006015720.1 1663307 R 984892 CDS YP_006015721.1 386319558 12611373 complement(1664923..1665813) 1 NC_017568.1 identified by match to protein family HMM PF03799, match to protein family HMM PF08478; cell division protein FtsQ 1665813 ftsQ 12611373 ftsQ Staphylococcus pseudintermedius ED99 cell division protein FtsQ YP_006015721.1 1664923 R 984892 CDS YP_006015722.1 386319559 12611374 complement(1665829..1667178) 1 NC_017568.1 identified by match to protein family HMM PF02875, match to protein family HMM PF08245, match to protein family HMM TIGR01087; UDP-N-acetylmuramoylalanine--D-glutamate ligase 1667178 murD 12611374 murD Staphylococcus pseudintermedius ED99 UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_006015722.1 1665829 R 984892 CDS YP_006015723.1 386319560 12611375 complement(1667179..1668144) 1 NC_017568.1 identified by match to protein family HMM PF00953, match to protein family HMM TIGR00445; phospho-N-acetylmuramoyl-pentapeptide- transferase 1668144 mraY 12611375 mraY Staphylococcus pseudintermedius ED99 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_006015723.1 1667179 R 984892 CDS YP_006015724.1 386319561 12611376 complement(1668216..1668338) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1668338 12611376 SPSE_1627 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015724.1 1668216 R 984892 CDS YP_006015725.1 386319562 12611377 complement(1668344..1670497) 1 NC_017568.1 identified by match to protein family HMM PF00905, match to protein family HMM PF03717, match to protein family HMM PF03793; penicillin-binding protein 1 1670497 pbp1 12611377 pbp1 Staphylococcus pseudintermedius ED99 penicillin-binding protein 1 YP_006015725.1 1668344 R 984892 CDS YP_006015726.1 386319563 12611378 complement(1670478..1670864) 1 NC_017568.1 identified by match to protein family HMM PF04977, match to protein family HMM TIGR02209; cell division protein, FtsL-like protein 1670864 12611378 SPSE_1629 Staphylococcus pseudintermedius ED99 cell division protein, FtsL-like protein YP_006015726.1 1670478 R 984892 CDS YP_006015727.1 386319564 12611379 complement(1670883..1671818) 1 NC_017568.1 identified by match to protein family HMM PF01795, match to protein family HMM TIGR00006; S-adenosyl-methyltransferase MraW 1671818 mraW 12611379 mraW Staphylococcus pseudintermedius ED99 S-adenosyl-methyltransferase MraW YP_006015727.1 1670883 R 984892 CDS YP_006015728.1 386319565 12611380 complement(1671836..1672267) 1 NC_017568.1 identified by match to protein family HMM PF02381, match to protein family HMM TIGR00242; MraZ protein 1672267 mraZ 12611380 mraZ Staphylococcus pseudintermedius ED99 MraZ protein YP_006015728.1 1671836 R 984892 CDS YP_006015729.1 386319566 12611381 complement(1672414..1674027) 1 NC_017568.1 hypothetical protein 1674027 12611381 SPSE_1632 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015729.1 1672414 R 984892 CDS YP_006015730.1 386319567 12611382 1674159..1674608 1 NC_017568.1 identified by match to protein family HMM PF00583; GNAT family acetyltransferase 1674608 12611382 SPSE_1633 Staphylococcus pseudintermedius ED99 GNAT family acetyltransferase YP_006015730.1 1674159 D 984892 CDS YP_006015731.1 386319568 12611383 complement(1674798..1675484) 1 NC_017568.1 identified by match to protein family HMM PF00702, match to protein family HMM TIGR01549, match to protein family HMM TIGR02254; HAD-superfamily hydrolase 1675484 12611383 SPSE_1634 Staphylococcus pseudintermedius ED99 HAD-superfamily hydrolase YP_006015731.1 1674798 R 984892 CDS YP_006015732.1 386319569 12611384 complement(1675798..1675929) 1 NC_017568.1 identified by match to protein family HMM PF05480; putative hemolysin-H1C 1675929 12611384 SPSE_1635 Staphylococcus pseudintermedius ED99 putative hemolysin-H1C YP_006015732.1 1675798 R 984892 CDS YP_006015733.1 386319570 12611385 1676226..1676432 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1676432 12611385 SPSE_1636 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015733.1 1676226 D 984892 CDS YP_006015734.1 386319571 12611386 1676819..1678123 1 NC_017568.1 identified by match to protein family HMM PF02386, match to protein family HMM TIGR00933; TrkH family potassium uptake protein 1678123 12611386 SPSE_1637 Staphylococcus pseudintermedius ED99 TrkH family potassium uptake protein YP_006015734.1 1676819 D 984892 CDS YP_006015735.1 386319572 12611387 complement(1678247..1678690) 1 NC_017568.1 identified by match to protein family HMM PF00903, match to protein family HMM PF06983; hypothetical protein 1678690 12611387 SPSE_1638 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015735.1 1678247 R 984892 CDS YP_006015736.1 386319573 12611389 complement(1679256..1679453) 1 NC_017568.1 hypothetical protein 1679453 12611389 SPSE_1640 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015736.1 1679256 R 984892 CDS YP_006015737.1 386319574 12611390 complement(1680028..1680393) 1 NC_017568.1 hypothetical protein 1680393 12611390 SPSE_1641 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015737.1 1680028 R 984892 CDS YP_006015738.1 386319575 12611391 complement(1680412..1680549) 1 NC_017568.1 hypothetical protein 1680549 12611391 SPSE_1642 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015738.1 1680412 R 984892 CDS YP_006015739.1 386319576 12611393 complement(1682595..1683104) 1 NC_017568.1 identified by match to protein family HMM PF00149, match to protein family HMM TIGR00040; putative phosphodiesterase 1683104 12611393 SPSE_1645 Staphylococcus pseudintermedius ED99 putative phosphodiesterase YP_006015739.1 1682595 R 984892 CDS YP_006015740.1 386319577 12611394 complement(1683101..1683685) 1 NC_017568.1 identified by match to protein family HMM PF01725, match to protein family HMM TIGR00042; non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 1683685 rdgB 12611394 rdgB Staphylococcus pseudintermedius ED99 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family YP_006015740.1 1683101 R 984892 CDS YP_006015741.1 386319578 12611395 complement(1683697..1684494) 1 NC_017568.1 identified by match to protein family HMM PF01177, match to protein family HMM TIGR00067; glutamate racemase 1684494 murI 12611395 murI Staphylococcus pseudintermedius ED99 glutamate racemase YP_006015741.1 1683697 R 984892 CDS YP_006015742.1 386319579 12611396 complement(1684745..1685560) 1 NC_017568.1 identified by match to protein family HMM PF00037, match to protein family HMM TIGR00384; succinate dehydrogenase iron-sulfur subunit 1685560 sdhB 12611396 sdhB Staphylococcus pseudintermedius ED99 succinate dehydrogenase iron-sulfur subunit YP_006015742.1 1684745 R 984892 CDS YP_006015743.1 386319580 12611397 complement(1685560..1687326) 1 NC_017568.1 identified by match to protein family HMM PF00890, match to protein family HMM PF02910, match to protein family HMM TIGR01811; succinate dehydrogenase flavoprotein subunit 1687326 sdhA 12611397 sdhA Staphylococcus pseudintermedius ED99 succinate dehydrogenase flavoprotein subunit YP_006015743.1 1685560 R 984892 CDS YP_006015744.1 386319581 12611398 complement(1687359..1687970) 1 NC_017568.1 identified by match to protein family HMM TIGR02046; succinate dehydrogenase cytochrome B subunit 1687970 sdhC 12611398 sdhC Staphylococcus pseudintermedius ED99 succinate dehydrogenase cytochrome B subunit YP_006015744.1 1687359 R 984892 CDS YP_006015745.1 386319582 12611399 complement(1688134..1689921) 1 NC_017568.1 identified by match to protein family HMM PF01541, match to protein family HMM PF02151, match to protein family HMM PF08459, match to protein family HMM TIGR00194; excinuclease ABC subunit C 1689921 uvrC 12611399 uvrC Staphylococcus pseudintermedius ED99 excinuclease ABC subunit C YP_006015745.1 1688134 R 984892 CDS YP_006015746.1 386319583 12611400 complement(1690189..1690503) 1 NC_017568.1 identified by match to protein family HMM PF00085, match to protein family HMM TIGR01068; thioredoxin 1690503 trxA 12611400 trxA Staphylococcus pseudintermedius ED99 thioredoxin YP_006015746.1 1690189 R 984892 CDS YP_006015747.1 386319584 12611401 complement(1690582..1692930) 1 NC_017568.1 identified by match to protein family HMM PF00488, match to protein family HMM PF01713, match to protein family HMM TIGR01069; recombination and DNA strand exchange inhibitor protein 1692930 12611401 SPSE_1653 Staphylococcus pseudintermedius ED99 recombination and DNA strand exchange inhibitor protein YP_006015747.1 1690582 R 984892 CDS YP_006015748.1 386319585 12611402 complement(1692946..1694655) 1 NC_017568.1 identified by match to protein family HMM PF02811; DNA-dependent DNA polymerase beta chain 1694655 12611402 SPSE_1654 Staphylococcus pseudintermedius ED99 DNA-dependent DNA polymerase beta chain YP_006015748.1 1692946 R 984892 CDS YP_006015749.1 386319586 12611403 complement(1694728..1695048) 1 NC_017568.1 hypothetical protein 1695048 12611403 SPSE_1655 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015749.1 1694728 R 984892 CDS YP_006015750.1 386319587 12611404 complement(1695251..1695517) 1 NC_017568.1 identified by match to protein family HMM PF05164; hypothetical protein 1695517 12611404 SPSE_1656 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015750.1 1695251 R 984892 CDS YP_006015751.1 386319588 12611405 1695660..1696598 1 NC_017568.1 identified by match to protein family HMM PF01351, match to protein family HMM TIGR00716; ribonuclease HIII 1696598 rnhC 12611405 rnhC Staphylococcus pseudintermedius ED99 ribonuclease HIII YP_006015751.1 1695660 D 984892 CDS YP_006015752.1 386319589 12611406 1697440..1697856 1 NC_017568.1 hypothetical protein 1697856 12611406 SPSE_1658 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015752.1 1697440 D 984892 CDS YP_006015753.1 386319590 12611407 complement(1698093..1700498) 1 NC_017568.1 identified by match to protein family HMM PF01588, match to protein family HMM PF03147, match to protein family HMM PF03483, match to protein family HMM PF03484, match to protein family HMM TIGR00472; phenylalanyl-tRNA synthetase subunit beta 1700498 pheT 12611407 pheT Staphylococcus pseudintermedius ED99 phenylalanyl-tRNA synthetase subunit beta YP_006015753.1 1698093 R 984892 CDS YP_006015754.1 386319591 12611408 complement(1700485..1701555) 1 NC_017568.1 identified by match to protein family HMM PF01409, match to protein family HMM PF02912, match to protein family HMM TIGR00468; phenylalanyl-tRNA synthetase subunit alpha 1701555 pheS 12611408 pheS Staphylococcus pseudintermedius ED99 phenylalanyl-tRNA synthetase subunit alpha YP_006015754.1 1700485 R 984892 CDS YP_006015755.1 386319592 12611409 complement(1701964..1702710) 1 NC_017568.1 identified by match to protein family HMM PF00588, match to protein family HMM PF08032; TrmH family RNA methyltransferase 1702710 12611409 SPSE_1661 Staphylococcus pseudintermedius ED99 TrmH family RNA methyltransferase YP_006015755.1 1701964 R 984892 CDS YP_006015756.1 386319593 12611410 complement(1702824..1702997) 1 NC_017568.1 identified by match to protein family HMM PF01783, match to protein family HMM TIGR01031; 50S ribosomal protein L32 1702997 rpmF 12611410 rpmF Staphylococcus pseudintermedius ED99 50S ribosomal protein L32 YP_006015756.1 1702824 R 984892 CDS YP_006015757.1 386319594 12611411 complement(1703054..1703593) 1 NC_017568.1 identified by match to protein family HMM PF02620; hypothetical protein 1703593 12611411 SPSE_1663 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015757.1 1703054 R 984892 CDS YP_006015758.1 386319595 12611412 1703720..1704856 1 NC_017568.1 identified by match to protein family HMM PF05636; hypothetical protein 1704856 12611412 SPSE_1664 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015758.1 1703720 D 984892 CDS YP_006015759.1 386319596 12611413 complement(1705190..1705681) 1 NC_017568.1 identified by match to protein family HMM PF01467, match to protein family HMM PF08218, match to protein family HMM TIGR00125, match to protein family HMM TIGR01510; pantetheine-phosphate adenylyltransferase 1705681 coaD 12611413 coaD Staphylococcus pseudintermedius ED99 pantetheine-phosphate adenylyltransferase YP_006015759.1 1705190 R 984892 CDS YP_006015760.1 386319597 12611414 complement(1705674..1706225) 1 NC_017568.1 identified by match to protein family HMM PF03602, match to protein family HMM TIGR00095; putative methyltransferase 1706225 12611414 SPSE_1666 Staphylococcus pseudintermedius ED99 putative methyltransferase YP_006015760.1 1705674 R 984892 CDS YP_006015761.1 386319598 12611415 1706288..1706677 1 NC_017568.1 hypothetical protein 1706677 12611415 SPSE_1667 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015761.1 1706288 D 984892 CDS YP_006015762.1 386319599 12611416 complement(1706680..1706925) 1 NC_017568.1 hypothetical protein 1706925 12611416 SPSE_1668 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015762.1 1706680 R 984892 CDS YP_006015763.1 386319600 12611417 1707019..1707951 1 NC_017568.1 identified by match to protein family HMM PF03009; glycerophosphoryl diester phosphodiesterase 1707951 12611417 SPSE_1669 Staphylococcus pseudintermedius ED99 glycerophosphoryl diester phosphodiesterase YP_006015763.1 1707019 D 984892 CDS YP_006015764.1 386319601 12611418 complement(1708016..1708456) 1 NC_017568.1 identified by match to protein family HMM PF07050; hypothetical protein 1708456 12611418 SPSE_1670 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015764.1 1708016 R 984892 CDS YP_006015765.1 386319602 12611419 complement(1708458..1709528) 1 NC_017568.1 identified by match to protein family HMM PF00188; hypothetical protein 1709528 12611419 SPSE_1671 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015765.1 1708458 R 984892 CDS YP_006015766.1 386319603 12611420 complement(1710171..1710632) 1 NC_017568.1 identified by match to protein family HMM PF04238; hypothetical protein 1710632 12611420 SPSE_1672 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015766.1 1710171 R 984892 CDS YP_006015767.1 386319604 12611421 complement(1710660..1711571) 1 NC_017568.1 identified by match to protein family HMM PF01040, match to protein family HMM TIGR01473; protoheme IX farnesyltransferase 1711571 ctaB 12611421 ctaB Staphylococcus pseudintermedius ED99 protoheme IX farnesyltransferase YP_006015767.1 1710660 R 984892 CDS YP_006015768.1 386319605 12611422 1711783..1712697 1 NC_017568.1 identified by match to protein family HMM PF02628; cytochrome aa3-controlling protein 1712697 ctaA 12611422 ctaA Staphylococcus pseudintermedius ED99 cytochrome aa3-controlling protein YP_006015768.1 1711783 D 984892 CDS YP_006015769.1 386319606 12611423 complement(1712835..1716284) 1 NC_017568.1 identified by match to protein family HMM PF00289, match to protein family HMM PF00364, match to protein family HMM PF00682, match to protein family HMM PF02222, match to protein family HMM PF02436, match to protein family HMM PF02785, match to prote; pyruvate carboxylase 1716284 pyc 12611423 pyc Staphylococcus pseudintermedius ED99 pyruvate carboxylase YP_006015769.1 1712835 R 984892 CDS YP_006015770.1 386319607 12611424 complement(1716483..1716665) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1716665 12611424 SPSE_1676 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015770.1 1716483 R 984892 CDS YP_006015771.1 386319608 12611425 complement(1716834..1718120) 1 NC_017568.1 identified by match to protein family HMM PF00078, match to protein family HMM PF08388; RNA-directed DNA polymerase 1718120 12611425 SPSE_1677 Staphylococcus pseudintermedius ED99 RNA-directed DNA polymerase YP_006015771.1 1716834 R 984892 CDS YP_006015772.1 386319609 12611426 complement(1718711..1719943) 1 NC_017568.1 identified by match to protein family HMM PF01098; FtsW/RodA/SpoVE family cell division protein 1719943 12611426 SPSE_1678 Staphylococcus pseudintermedius ED99 FtsW/RodA/SpoVE family cell division protein YP_006015772.1 1718711 R 984892 CDS YP_006015773.1 386319610 12611427 complement(1720014..1720289) 1 NC_017568.1 identified by match to protein family HMM PF07408; hypothetical protein 1720289 12611427 SPSE_1679 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015773.1 1720014 R 984892 CDS YP_006015774.1 386319611 12611428 1720426..1720908 1 NC_017568.1 hypothetical protein 1720908 12611428 SPSE_1680 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015774.1 1720426 D 984892 CDS YP_006015775.1 386319612 12611429 1720909..1721112 1 NC_017568.1 hypothetical protein 1721112 12611429 SPSE_1681 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015775.1 1720909 D 984892 CDS YP_006015776.1 386319613 12611430 complement(1721236..1722363) 1 NC_017568.1 identified by match to protein family HMM PF00724; NADH-dependent flavin oxidoreductase 1722363 12611430 SPSE_1682 Staphylococcus pseudintermedius ED99 NADH-dependent flavin oxidoreductase YP_006015776.1 1721236 R 984892 CDS YP_006015777.1 386319614 12611431 complement(1722791..1724641) 1 NC_017568.1 identified by match to protein family HMM PF00009, match to protein family HMM PF00679, match to protein family HMM PF03144, match to protein family HMM TIGR00231, match to protein family HMM TIGR01394; GTP-binding protein TypA 1724641 typA 12611431 typA Staphylococcus pseudintermedius ED99 GTP-binding protein TypA YP_006015777.1 1722791 R 984892 CDS YP_006015778.1 386319615 12611432 1724738..1724923 1 NC_017568.1 hypothetical protein 1724923 12611432 SPSE_1684 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015778.1 1724738 D 984892 CDS YP_006015779.1 386319616 12611433 complement(1725151..1725969) 1 NC_017568.1 identified by match to protein family HMM PF00459; inositol monophosphatase family protein 1725969 12611433 SPSE_1685 Staphylococcus pseudintermedius ED99 inositol monophosphatase family protein YP_006015779.1 1725151 R 984892 CDS YP_006015780.1 386319617 12611434 1726087..1726698 1 NC_017568.1 identified by match to protein family HMM PF06335; hypothetical protein 1726698 12611434 SPSE_1686 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015780.1 1726087 D 984892 CDS YP_006015781.1 386319618 12611435 complement(1727382..1728071) 1 NC_017568.1 hypothetical protein 1728071 12611435 SPSE_1687 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015781.1 1727382 R 984892 CDS YP_006015782.1 386319619 12611436 complement(1728298..1729308) 1 NC_017568.1 hypothetical protein 1729308 12611436 SPSE_1688 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015782.1 1728298 R 984892 CDS YP_006015783.1 386319620 12611437 complement(1729380..1730453) 1 NC_017568.1 identified by match to protein family HMM PF01547; spermidine/putrescine-binding periplasmic protein PotD 1730453 potD 12611437 potD Staphylococcus pseudintermedius ED99 spermidine/putrescine-binding periplasmic protein PotD YP_006015783.1 1729380 R 984892 CDS YP_006015784.1 386319621 12611438 complement(1730450..1731262) 1 NC_017568.1 identified by match to protein family HMM PF00528; spermidine/putrescine ABC transporter permease PotC 1731262 potC 12611438 potC Staphylococcus pseudintermedius ED99 spermidine/putrescine ABC transporter permease PotC YP_006015784.1 1730450 R 984892 CDS YP_006015785.1 386319622 12611439 complement(1731259..1732065) 1 NC_017568.1 spermidine/putrescine ABC transporter permease PotB 1732065 potB 12611439 potB Staphylococcus pseudintermedius ED99 spermidine/putrescine ABC transporter permease PotB YP_006015785.1 1731259 R 984892 CDS YP_006015786.1 386319623 12611440 complement(1732052..1733152) 1 NC_017568.1 identified by match to protein family HMM PF00005, match to protein family HMM PF08402; spermidine/putrescine import ATP-binding protein PotA 1733152 potA 12611440 potA Staphylococcus pseudintermedius ED99 spermidine/putrescine import ATP-binding protein PotA YP_006015786.1 1732052 R 984892 CDS YP_006015787.1 386319624 12611441 complement(1733167..1733706) 1 NC_017568.1 identified by match to protein family HMM PF01381, match to protein family HMM PF07883; Cro/CI family transcriptional regulator 1733706 12611441 SPSE_1693 Staphylococcus pseudintermedius ED99 Cro/CI family transcriptional regulator YP_006015787.1 1733167 R 984892 CDS YP_006015788.1 386319625 12611442 complement(1733809..1734081) 1 NC_017568.1 identified by match to protein family HMM PF05256; hypothetical protein 1734081 12611442 SPSE_1694 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015788.1 1733809 R 984892 CDS YP_006015789.1 386319626 12611443 complement(1734891..1736297) 1 NC_017568.1 identified by match to protein family HMM PF00070, match to protein family HMM PF01134, match to protein family HMM PF02852, match to protein family HMM PF07992, match to protein family HMM TIGR01350; pyruvate dehydrogenase complex E3 component, lipoamide dehydrogenase 1736297 pdhD 12611443 pdhD Staphylococcus pseudintermedius ED99 pyruvate dehydrogenase complex E3 component, lipoamide dehydrogenase YP_006015789.1 1734891 R 984892 CDS YP_006015790.1 386319627 12611444 complement(1736301..1737602) 1 NC_017568.1 identified by match to protein family HMM PF00198, match to protein family HMM PF00364, match to protein family HMM PF02817; pyruvate dehydrogenase complex E2 component, dihydrolipoamide acetyltransferase 1737602 pdhC 12611444 pdhC Staphylococcus pseudintermedius ED99 pyruvate dehydrogenase complex E2 component, dihydrolipoamide acetyltransferase YP_006015790.1 1736301 R 984892 CDS YP_006015791.1 386319628 12611445 complement(1737758..1738735) 1 NC_017568.1 identified by match to protein family HMM PF02779, match to protein family HMM PF02780; pyruvate dehydrogenase E1 component subunit beta 1738735 pdhB 12611445 pdhB Staphylococcus pseudintermedius ED99 pyruvate dehydrogenase E1 component subunit beta YP_006015791.1 1737758 R 984892 CDS YP_006015792.1 386319629 12611446 complement(1738739..1739851) 1 NC_017568.1 identified by match to protein family HMM PF00676, match to protein family HMM TIGR03181; pyruvate dehydrogenase E1 component alpha subunit 1739851 pdhA 12611446 pdhA Staphylococcus pseudintermedius ED99 pyruvate dehydrogenase E1 component alpha subunit YP_006015792.1 1738739 R 984892 CDS YP_006015793.1 386319630 12611447 complement(1740015..1740647) 1 NC_017568.1 putative lipoprotein 1740647 12611447 SPSE_1699 Staphylococcus pseudintermedius ED99 putative lipoprotein YP_006015793.1 1740015 R 984892 CDS YP_006015794.1 386319631 12611448 1740894..1741445 1 NC_017568.1 identified by match to protein family HMM PF01327, match to protein family HMM TIGR00079; peptide deformylase 2 1741445 defB 12611448 defB Staphylococcus pseudintermedius ED99 peptide deformylase 2 YP_006015794.1 1740894 D 984892 CDS YP_006015795.1 386319632 12611449 complement(1742059..1742331) 1 NC_017568.1 hypothetical protein 1742331 12611449 SPSE_1701 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015795.1 1742059 R 984892 CDS YP_006015796.1 386319633 12611450 1742533..1742658 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1742658 12611450 SPSE_1702 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015796.1 1742533 D 984892 CDS YP_006015797.1 386319634 12611451 1742670..1742885 1 NC_017568.1 identified by match to protein family HMM PF07288; hypothetical protein 1742885 12611451 SPSE_1703 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015797.1 1742670 D 984892 CDS YP_006015798.1 386319635 12611452 1742885..1744564 1 NC_017568.1 identified by match to protein family HMM PF00753, match to protein family HMM PF07521, match to protein family HMM TIGR00649; metallo-beta-lactamase superfamily protein 1744564 12611452 SPSE_1704 Staphylococcus pseudintermedius ED99 metallo-beta-lactamase superfamily protein YP_006015798.1 1742885 D 984892 CDS YP_006015799.1 386319636 12611453 complement(1744657..1744800) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1744800 12611453 SPSE_1705 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015799.1 1744657 R 984892 CDS YP_006015800.1 386319637 12611454 complement(1745139..1745798) 1 NC_017568.1 identified by match to protein family HMM PF02080, match to protein family HMM PF02254; potassium uptake protein TrkA 1745798 12611454 SPSE_1706 Staphylococcus pseudintermedius ED99 potassium uptake protein TrkA YP_006015800.1 1745139 R 984892 CDS YP_006015801.1 386319638 12611455 complement(1745947..1746966) 1 NC_017568.1 cytochrome d ubiquinol oxidase, subunit II 1746966 cydB 12611455 cydB Staphylococcus pseudintermedius ED99 cytochrome d ubiquinol oxidase, subunit II YP_006015801.1 1745947 R 984892 CDS YP_006015802.1 386319639 12611456 complement(1746966..1748309) 1 NC_017568.1 identified by match to protein family HMM PF01654; cytochrome d ubiquinol oxidase, subunit I 1748309 cydA 12611456 cydA Staphylococcus pseudintermedius ED99 cytochrome d ubiquinol oxidase, subunit I YP_006015802.1 1746966 R 984892 CDS YP_006015803.1 386319640 12611457 1748512..1748745 1 NC_017568.1 identified by match to protein family HMM PF00462; glutaredoxin 1748745 12611457 SPSE_1709 Staphylococcus pseudintermedius ED99 glutaredoxin YP_006015803.1 1748512 D 984892 CDS YP_006015804.1 386319641 12611458 complement(1748922..1750643) 1 NC_017568.1 identified by match to protein family HMM PF00391, match to protein family HMM PF02896, match to protein family HMM PF05524, match to protein family HMM TIGR01417; phosphoenolpyruvate-protein phosphotransferase 1750643 ptsI 12611458 ptsI Staphylococcus pseudintermedius ED99 phosphoenolpyruvate-protein phosphotransferase YP_006015804.1 1748922 R 984892 CDS YP_006015805.1 386319642 12611459 complement(1750643..1750909) 1 NC_017568.1 identified by match to protein family HMM PF00381, match to protein family HMM TIGR01003; phosphocarrier protein HPr 1750909 ptsH 12611459 ptsH Staphylococcus pseudintermedius ED99 phosphocarrier protein HPr YP_006015805.1 1750643 R 984892 CDS YP_006015806.1 386319643 12611460 complement(1751073..1751603) 1 NC_017568.1 hypothetical protein 1751603 12611460 SPSE_1712 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015806.1 1751073 R 984892 CDS YP_006015807.1 386319644 12611461 complement(1751664..1752833) 1 NC_017568.1 putative methyltransferase 1752833 12611461 SPSE_1713 Staphylococcus pseudintermedius ED99 putative methyltransferase YP_006015807.1 1751664 R 984892 CDS YP_006015808.1 386319645 12611462 complement(1752969..1754300) 1 NC_017568.1 membrane protein 1754300 12611462 SPSE_1714 Staphylococcus pseudintermedius ED99 membrane protein YP_006015808.1 1752969 R 984892 CDS YP_006015809.1 386319646 12611463 1754666..1754797 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1754797 12611463 SPSE_1715 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015809.1 1754666 D 984892 CDS YP_006015810.1 386319647 12611464 1755864..1756439 1 NC_017568.1 hypothetical protein 1756439 12611464 SPSE_1717 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015810.1 1755864 D 984892 CDS YP_006015811.1 386319648 12611465 1756452..1757855 1 NC_017568.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1757855 12611465 SPSE_1718 Staphylococcus pseudintermedius ED99 ABC transporter ATP-binding protein YP_006015811.1 1756452 D 984892 CDS YP_006015812.1 386319649 12611466 1757852..1758643 1 NC_017568.1 identified by match to protein family HMM PF02361; cobalt transport family protein 1758643 12611466 SPSE_1719 Staphylococcus pseudintermedius ED99 cobalt transport family protein YP_006015812.1 1757852 D 984892 CDS YP_006015813.1 386319650 12611467 complement(1758862..1760115) 1 NC_017568.1 identified by match to protein family HMM PF01071, match to protein family HMM PF02655, match to protein family HMM PF02843, match to protein family HMM PF02844, match to protein family HMM PF08443, match to protein family HMM TIGR00877; phosphoribosylamine--glycine ligase 1760115 purD 12611467 purD Staphylococcus pseudintermedius ED99 phosphoribosylamine--glycine ligase YP_006015813.1 1758862 R 984892 CDS YP_006015814.1 386319651 12611468 complement(1760133..1761611) 1 NC_017568.1 identified by match to protein family HMM PF01808, match to protein family HMM PF02142, match to protein family HMM TIGR00355; bifunctional purine biosynthesis protein PurH 1761611 purH 12611468 purH Staphylococcus pseudintermedius ED99 bifunctional purine biosynthesis protein PurH YP_006015814.1 1760133 R 984892 CDS YP_006015815.1 386319652 12611469 complement(1761628..1762194) 1 NC_017568.1 identified by match to protein family HMM PF00551, match to protein family HMM TIGR00639; phosphoribosylglycinamide formyltransferase 1762194 purN 12611469 purN Staphylococcus pseudintermedius ED99 phosphoribosylglycinamide formyltransferase YP_006015815.1 1761628 R 984892 CDS YP_006015816.1 386319653 12611470 complement(1762194..1763225) 1 NC_017568.1 identified by match to protein family HMM PF00586, match to protein family HMM PF02769, match to protein family HMM TIGR00878; phosphoribosylformylglycinamidine cyclo-ligase 1763225 purM 12611470 purM Staphylococcus pseudintermedius ED99 phosphoribosylformylglycinamidine cyclo-ligase YP_006015816.1 1762194 R 984892 CDS YP_006015817.1 386319654 12611471 complement(1763229..1764650) 1 NC_017568.1 identified by match to protein family HMM PF00156, match to protein family HMM PF00310, match to protein family HMM TIGR01134; amidophosphoribosyltransferase 1764650 purF 12611471 purF Staphylococcus pseudintermedius ED99 amidophosphoribosyltransferase YP_006015817.1 1763229 R 984892 CDS YP_006015818.1 386319655 12611472 complement(1764629..1766818) 1 NC_017568.1 identified by match to protein family HMM PF00586, match to protein family HMM PF02769, match to protein family HMM TIGR01736; phosphoribosylformylglycinamidine synthase II 1766818 purL 12611472 purL Staphylococcus pseudintermedius ED99 phosphoribosylformylglycinamidine synthase II YP_006015818.1 1764629 R 984892 CDS YP_006015819.1 386319656 12611473 complement(1766811..1767482) 1 NC_017568.1 identified by match to protein family HMM TIGR01737; phosphoribosylformylglycinamidine synthase I 1767482 purQ 12611473 purQ Staphylococcus pseudintermedius ED99 phosphoribosylformylglycinamidine synthase I YP_006015819.1 1766811 R 984892 CDS YP_006015820.1 386319657 12611474 complement(1767484..1767744) 1 NC_017568.1 identified by match to protein family HMM PF02700, match to protein family HMM TIGR00302; phosphoribosylformylglycinamidine synthase subunit PurS 1767744 purS 12611474 purS Staphylococcus pseudintermedius ED99 phosphoribosylformylglycinamidine synthase subunit PurS YP_006015820.1 1767484 R 984892 CDS YP_006015821.1 386319658 12611475 complement(1767747..1768448) 1 NC_017568.1 identified by match to protein family HMM PF01259, match to protein family HMM TIGR00081; phosphoribosylaminoimidazole succinocarboxamide synthase 1768448 purC 12611475 purC Staphylococcus pseudintermedius ED99 phosphoribosylaminoimidazole succinocarboxamide synthase YP_006015821.1 1767747 R 984892 CDS YP_006015822.1 386319659 12611476 complement(1768445..1769578) 1 NC_017568.1 identified by match to protein family HMM PF02222, match to protein family HMM TIGR01161; phosphoribosylaminoimidazole carboxylase ATPase subunit 1769578 purK 12611476 purK Staphylococcus pseudintermedius ED99 phosphoribosylaminoimidazole carboxylase ATPase subunit YP_006015822.1 1768445 R 984892 CDS YP_006015823.1 386319660 12611477 complement(1769565..1770047) 1 NC_017568.1 identified by match to protein family HMM PF00731, match to protein family HMM TIGR01162; phosphoribosylaminoimidazole carboxylase catalytic subunit 1770047 purE 12611477 purE Staphylococcus pseudintermedius ED99 phosphoribosylaminoimidazole carboxylase catalytic subunit YP_006015823.1 1769565 R 984892 CDS YP_006015824.1 386319661 12611478 1770257..1771114 1 NC_017568.1 identified by match to protein family HMM PF00763, match to protein family HMM PF02882; bifunctional; methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase 1771114 folD 12611478 folD Staphylococcus pseudintermedius ED99 methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase YP_006015824.1 1770257 D 984892 CDS YP_006015825.1 386319662 12611479 complement(1771426..1772571) 1 NC_017568.1 identified by match to protein family HMM PF00042, match to protein family HMM PF00175, match to protein family HMM PF00970; flavohemoprotein 1772571 hmp 12611479 hmp Staphylococcus pseudintermedius ED99 flavohemoprotein YP_006015825.1 1771426 R 984892 CDS YP_006015826.1 386319663 12611480 1772799..1773134 1 NC_017568.1 chitinase-like protein 1773134 12611480 SPSE_1733 Staphylococcus pseudintermedius ED99 chitinase-like protein YP_006015826.1 1772799 D 984892 CDS YP_006015827.1 386319664 12611481 complement(1773416..1773556) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1773556 12611481 SPSE_1734 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015827.1 1773416 R 984892 CDS YP_006015828.1 386319665 12611482 1773635..1774735 1 NC_017568.1 identified by match to protein family HMM PF00116, match to protein family HMM PF02790, match to protein family HMM PF06481, match to protein family HMM TIGR01432; quinol oxidase subunit II 1774735 qoxA 12611482 qoxA Staphylococcus pseudintermedius ED99 quinol oxidase subunit II YP_006015828.1 1773635 D 984892 CDS YP_006015829.1 386319666 12611483 1774735..1776726 1 NC_017568.1 identified by match to protein family HMM PF00115, match to protein family HMM TIGR02882; quinol oxidase subunit I 1776726 qoxB 12611483 qoxB Staphylococcus pseudintermedius ED99 quinol oxidase subunit I YP_006015829.1 1774735 D 984892 CDS YP_006015830.1 386319667 12611484 1776716..1777324 1 NC_017568.1 identified by match to protein family HMM PF00510, match to protein family HMM TIGR02897; quinol oxidase subunit III 1777324 qoxC 12611484 qoxC Staphylococcus pseudintermedius ED99 quinol oxidase subunit III YP_006015830.1 1776716 D 984892 CDS YP_006015831.1 386319668 12611485 1777321..1777611 1 NC_017568.1 identified by match to protein family HMM PF03626, match to protein family HMM TIGR02901; quinol oxidase subunit IV 1777611 qoxD 12611485 qoxD Staphylococcus pseudintermedius ED99 quinol oxidase subunit IV YP_006015831.1 1777321 D 984892 CDS YP_006015832.1 386319669 12611486 1777791..1778696 1 NC_017568.1 identified by match to protein family HMM PF01156; inosine-uridine preferring nucleoside hydrolase 1778696 12611486 SPSE_1739 Staphylococcus pseudintermedius ED99 inosine-uridine preferring nucleoside hydrolase YP_006015832.1 1777791 D 984892 CDS YP_006015833.1 386319670 12611487 complement(1779429..1781474) 1 NC_017568.1 hypothetical protein 1781474 12611487 SPSE_1740 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015833.1 1779429 R 984892 CDS YP_006015834.1 386319671 12611488 complement(1781493..1782701) 1 NC_017568.1 identified by match to protein family HMM PF07690; major facilitator family transporter 1782701 12611488 SPSE_1741 Staphylococcus pseudintermedius ED99 major facilitator family transporter YP_006015834.1 1781493 R 984892 CDS YP_006015835.1 386319672 12611489 complement(1782682..1783224) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1783224 12611489 SPSE_1742 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015835.1 1782682 R 984892 CDS YP_006015836.1 386319673 12611490 1783703..1784197 1 NC_017568.1 hypothetical protein 1784197 12611490 SPSE_1743 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015836.1 1783703 D 984892 CDS YP_006015837.1 386319674 12611491 complement(1784181..1785005) 1 NC_017568.1 identified by match to protein family HMM PF00069; protein kinase domain protein 1785005 12611491 SPSE_1744 Staphylococcus pseudintermedius ED99 protein kinase domain protein YP_006015837.1 1784181 R 984892 CDS YP_006015838.1 386319675 12611492 complement(1784972..1785340) 1 NC_017568.1 hypothetical protein 1785340 12611492 SPSE_1745 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015838.1 1784972 R 984892 CDS YP_006015839.1 386319676 12611493 1785796..1786089 1 NC_017568.1 putative transposition helper protein, truncated 1786089 12611493 SPSE_1746 Staphylococcus pseudintermedius ED99 putative transposition helper protein, truncated YP_006015839.1 1785796 D 984892 CDS YP_006015840.1 386319677 12611494 complement(1786480..1787115) 1 NC_017568.1 identified by match to protein family HMM PF03413; putative lipoprotein 1787115 12611494 SPSE_1747 Staphylococcus pseudintermedius ED99 putative lipoprotein YP_006015840.1 1786480 R 984892 CDS YP_006015841.1 386319678 12611495 complement(1787225..1788556) 1 NC_017568.1 identified by match to protein family HMM PF00534; glycoside hydrolase family protein 1788556 12611495 SPSE_1748 Staphylococcus pseudintermedius ED99 glycoside hydrolase family protein YP_006015841.1 1787225 R 984892 CDS YP_006015842.1 386319679 12611496 complement(1788604..1789419) 1 NC_017568.1 hypothetical protein 1789419 12611496 SPSE_1749 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015842.1 1788604 R 984892 CDS YP_006015843.1 386319680 12611497 complement(1789439..1790359) 1 NC_017568.1 identified by match to protein family HMM PF00005; teichoic acids export ATP-binding protein 1790359 12611497 SPSE_1750 Staphylococcus pseudintermedius ED99 teichoic acids export ATP-binding protein YP_006015843.1 1789439 R 984892 CDS YP_006015844.1 386319681 12611498 complement(1790365..1791555) 1 NC_017568.1 hypothetical protein 1791555 12611498 SPSE_1751 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015844.1 1790365 R 984892 CDS YP_006015845.1 386319682 12611499 complement(1791567..1792376) 1 NC_017568.1 identified by match to protein family HMM PF01061; teichoic acid translocation permease 1792376 12611499 SPSE_1752 Staphylococcus pseudintermedius ED99 teichoic acid translocation permease YP_006015845.1 1791567 R 984892 CDS YP_006015846.1 386319683 12611500 complement(1792373..1794244) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1794244 12611500 SPSE_1753 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015846.1 1792373 R 984892 CDS YP_006015847.1 386319684 12611501 complement(1794254..1796815) 1 NC_017568.1 identified by match to protein family HMM PF00535; glycosyl transferase family protein 1796815 12611501 SPSE_1754 Staphylococcus pseudintermedius ED99 glycosyl transferase family protein YP_006015847.1 1794254 R 984892 CDS YP_006015848.1 386319685 12611502 complement(1796817..1797749) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1797749 12611502 SPSE_1755 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015848.1 1796817 R 984892 CDS YP_006015849.1 386319686 12611503 complement(1797880..1799154) 1 NC_017568.1 identified by match to protein family HMM PF00984, match to protein family HMM PF03720, match to protein family HMM PF03721, match to protein family HMM TIGR03026; UDP-N-acetyl-D-mannosamine dehydrogenase 1799154 12611503 SPSE_1756 Staphylococcus pseudintermedius ED99 UDP-N-acetyl-D-mannosamine dehydrogenase YP_006015849.1 1797880 R 984892 CDS YP_006015850.1 386319687 12611504 complement(1799814..1801457) 1 NC_017568.1 identified by match to protein family HMM PF00408, match to protein family HMM PF02878, match to protein family HMM PF02879, match to protein family HMM PF02880; phosphoglucomutase 1801457 pgcA 12611504 pgcA Staphylococcus pseudintermedius ED99 phosphoglucomutase YP_006015850.1 1799814 R 984892 CDS YP_006015851.1 386319688 12611505 complement(1801481..1801657) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1801657 12611505 SPSE_1758 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015851.1 1801481 R 984892 CDS YP_006015852.1 386319689 12611506 1801689..1802867 1 NC_017568.1 identified by match to protein family HMM PF03816, match to protein family HMM TIGR00350; LytR family transcriptional regulator 1802867 12611506 SPSE_1759 Staphylococcus pseudintermedius ED99 LytR family transcriptional regulator YP_006015852.1 1801689 D 984892 CDS YP_006015853.1 386319690 12611507 1802882..1803352 1 NC_017568.1 hypothetical protein 1803352 12611507 SPSE_1760 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015853.1 1802882 D 984892 CDS YP_006015854.1 386319691 12611508 1803547..1803975 1 NC_017568.1 identified by match to protein family HMM PF00583; GNAT family acetyltransferase 1803975 12611508 SPSE_1761 Staphylococcus pseudintermedius ED99 GNAT family acetyltransferase YP_006015854.1 1803547 D 984892 CDS YP_006015855.1 386319692 12611509 1804304..1808470 1 NC_017568.1 identified by match to protein family HMM PF01510, match to protein family HMM PF01832; bifunctional; autolysin 1808470 spsC 12611509 spsC Staphylococcus pseudintermedius ED99 autolysin YP_006015855.1 1804304 D 984892 CDS YP_006015856.1 386319693 12611510 complement(1808919..1810724) 1 NC_017568.1 identified by match to protein family HMM PF01757; putative acyltransferase 1810724 12611510 SPSE_1763 Staphylococcus pseudintermedius ED99 putative acyltransferase YP_006015856.1 1808919 R 984892 CDS YP_006015857.1 386319694 12611511 1811083..1812093 1 NC_017568.1 identified by match to protein family HMM PF01757; putative acyltransferase 1812093 12611511 SPSE_1764 Staphylococcus pseudintermedius ED99 putative acyltransferase YP_006015857.1 1811083 D 984892 CDS YP_006015858.1 386319695 12611512 1812208..1813368 1 NC_017568.1 identified by match to protein family HMM PF00155, match to protein family HMM PF00266; putative aminotransferase 1813368 12611512 SPSE_1765 Staphylococcus pseudintermedius ED99 putative aminotransferase YP_006015858.1 1812208 D 984892 CDS YP_006015859.1 386319696 12611513 complement(1813557..1814375) 1 NC_017568.1 identified by match to protein family HMM PF00378, match to protein family HMM TIGR01929; naphthoate synthase 1814375 menB 12611513 menB Staphylococcus pseudintermedius ED99 naphthoate synthase YP_006015859.1 1813557 R 984892 CDS YP_006015860.1 386319697 12611514 complement(1814392..1815183) 1 NC_017568.1 identified by match to protein family HMM PF00561; alpha/beta hydrolase 1815183 12611514 SPSE_1767 Staphylococcus pseudintermedius ED99 alpha/beta hydrolase YP_006015860.1 1814392 R 984892 CDS YP_006015861.1 386319698 12611515 complement(1815170..1816840) 1 NC_017568.1 identified by match to protein family HMM PF02776, match to protein family HMM TIGR00173; 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase 1816840 menD 12611515 menD Staphylococcus pseudintermedius ED99 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase YP_006015861.1 1815170 R 984892 CDS YP_006015862.1 386319699 12611516 complement(1816833..1818191) 1 NC_017568.1 identified by match to protein family HMM PF00425, match to protein family HMM TIGR00543; isochorismate synthase 1818191 menF 12611516 menF Staphylococcus pseudintermedius ED99 isochorismate synthase YP_006015862.1 1816833 R 984892 CDS YP_006015863.1 386319700 12611517 1818365..1819303 1 NC_017568.1 identified by match to protein family HMM PF01040, match to protein family HMM TIGR00751; 1,4-dihydroxy-2-naphthoate octaprenyltransferase 1819303 menA 12611517 menA Staphylococcus pseudintermedius ED99 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_006015863.1 1818365 D 984892 CDS YP_006015864.1 386319701 12611518 complement(1819619..1820383) 1 NC_017568.1 identified by match to protein family HMM PF03649, match to protein family HMM TIGR00245; hypothetical protein 1820383 12611518 SPSE_1771 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015864.1 1819619 R 984892 CDS YP_006015865.1 386319702 12611519 complement(1820380..1821030) 1 NC_017568.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1821030 12611519 SPSE_1772 Staphylococcus pseudintermedius ED99 ABC transporter ATP-binding protein YP_006015865.1 1820380 R 984892 CDS YP_006015866.1 386319703 12611520 complement(1821023..1821598) 1 NC_017568.1 identified by match to protein family HMM PF00583; GNAT family acetyltransferase 1821598 12611520 SPSE_1773 Staphylococcus pseudintermedius ED99 GNAT family acetyltransferase YP_006015866.1 1821023 R 984892 CDS YP_006015867.1 386319704 12611521 complement(1821940..1822323) 1 NC_017568.1 identified by match to protein family HMM PF03965; penicillinase repressor 1822323 blaI-1 12611521 blaI-1 Staphylococcus pseudintermedius ED99 penicillinase repressor YP_006015867.1 1821940 R 984892 CDS YP_006015868.1 386319705 12611522 complement(1822313..1824070) 1 NC_017568.1 identified by match to protein family HMM PF00905, match to protein family HMM PF05569; regulatory protein blaR1 1824070 blaR1-1 12611522 blaR1-1 Staphylococcus pseudintermedius ED99 regulatory protein blaR1 YP_006015868.1 1822313 R 984892 CDS YP_006015869.1 386319706 12611523 1824177..1825022 1 NC_017568.1 identified by match to protein family HMM PF00144; beta-lactamase 1825022 blaZ-1 12611523 blaZ-1 Staphylococcus pseudintermedius ED99 beta-lactamase YP_006015869.1 1824177 D 984892 CDS YP_006015870.1 386319707 12611524 1825335..1825745 1 NC_017568.1 identified by match to protein family HMM PF08863; hypothetical protein 1825745 12611524 SPSE_1777 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015870.1 1825335 D 984892 CDS YP_006015871.1 386319708 12611525 complement(1825788..1827158) 1 NC_017568.1 hypothetical protein 1827158 12611525 SPSE_1778 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015871.1 1825788 R 984892 CDS YP_006015872.1 386319709 12611526 complement(1827163..1827528) 1 NC_017568.1 Tn554-related, transposase C 1827528 tnpC 12611526 tnpC Staphylococcus pseudintermedius ED99 Tn554-related, transposase C YP_006015872.1 1827163 R 984892 CDS YP_006015873.1 386319710 12611527 complement(1827537..1829600) 1 NC_017568.1 identified by match to protein family HMM PF00589; Tn554-related, transposase B 1829600 tnpB 12611527 tnpB Staphylococcus pseudintermedius ED99 Tn554-related, transposase B YP_006015873.1 1827537 R 984892 CDS YP_006015874.1 386319711 12611528 complement(1829603..1830715) 1 NC_017568.1 identified by match to protein family HMM PF00589, match to protein family HMM PF02899; Tn554-related, transposase A 1830715 tnpA 12611528 tnpA Staphylococcus pseudintermedius ED99 Tn554-related, transposase A YP_006015874.1 1829603 R 984892 CDS YP_006015875.1 386319712 12611529 1830911..1831195 1 NC_017568.1 identified by match to protein family HMM PF08863; hypothetical protein 1831195 12611529 SPSE_1782 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015875.1 1830911 D 984892 CDS YP_006015876.1 386319713 12611530 complement(1831342..1831944) 1 NC_017568.1 identified by match to protein family HMM PF02517; CAAX amino protease family protein 1831944 12611530 SPSE_1783 Staphylococcus pseudintermedius ED99 CAAX amino protease family protein YP_006015876.1 1831342 R 984892 CDS YP_006015877.1 386319714 12611531 complement(1831951..1832136) 1 NC_017568.1 hypothetical protein 1832136 12611531 SPSE_1784 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015877.1 1831951 R 984892 CDS YP_006015878.1 386319715 12611532 1832324..1833316 1 NC_017568.1 identified by match to protein family HMM PF03099, match to protein family HMM TIGR00545; lipoate-protein ligase A 1833316 12611532 SPSE_1785 Staphylococcus pseudintermedius ED99 lipoate-protein ligase A YP_006015878.1 1832324 D 984892 CDS YP_006015879.1 386319716 12611533 complement(1833538..1833756) 1 NC_017568.1 identified by match to protein family HMM PF08858; hypothetical protein 1833756 12611533 SPSE_1786 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015879.1 1833538 R 984892 CDS YP_006015880.1 386319717 12611534 1833993..1834610 1 NC_017568.1 identified by match to protein family HMM PF06338; competence transcription factor ComK 1834610 comK 12611534 comK Staphylococcus pseudintermedius ED99 competence transcription factor ComK YP_006015880.1 1833993 D 984892 CDS YP_006015881.1 386319718 12611538 1839017..1840621 1 NC_017568.1 identified by match to protein family HMM PF01609; transposase for insertion sequence element IS1182 1840621 12611538 SPSE_1791 Staphylococcus pseudintermedius ED99 transposase for insertion sequence element IS1182 YP_006015881.1 1839017 D 984892 CDS YP_006015882.1 386319719 12611539 complement(1841342..1842001) 1 NC_017568.1 identified by match to protein family HMM PF01872; hypothetical protein 1842001 12611539 SPSE_1792 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015882.1 1841342 R 984892 CDS YP_006015883.1 386319720 12611540 complement(1842492..1843064) 1 NC_017568.1 identified by match to protein family HMM PF08279; transcriptional regulator 1843064 12611540 SPSE_1793 Staphylococcus pseudintermedius ED99 transcriptional regulator YP_006015883.1 1842492 R 984892 CDS YP_006015884.1 386319721 12611541 complement(1843340..1844134) 1 NC_017568.1 identified by match to protein family HMM PF01636; aminoglycoside 3'-phosphotransferase 1844134 aphA 12611541 aphA Staphylococcus pseudintermedius ED99 aminoglycoside 3'-phosphotransferase YP_006015884.1 1843340 R 984892 CDS YP_006015885.1 386319722 12611542 complement(1844227..1844769) 1 NC_017568.1 identified by match to protein family HMM PF00583; streptothricin acetyltransferase 1844769 12611542 SPSE_1795 Staphylococcus pseudintermedius ED99 streptothricin acetyltransferase YP_006015885.1 1844227 R 984892 CDS YP_006015886.1 386319723 12611543 complement(1844766..1845674) 1 NC_017568.1 identified by match to protein family HMM PF04439; streptomycin aminoglycoside 6-adenylyltransferase 1845674 aadE 12611543 aadE Staphylococcus pseudintermedius ED99 streptomycin aminoglycoside 6-adenylyltransferase YP_006015886.1 1844766 R 984892 CDS YP_006015887.1 386319724 12611544 complement(1845707..1846441) 1 NC_017568.1 identified by match to protein family HMM PF01209, match to protein family HMM PF08241, match to protein family HMM PF08242; putative methyltransferase 1846441 12611544 SPSE_1797 Staphylococcus pseudintermedius ED99 putative methyltransferase YP_006015887.1 1845707 R 984892 CDS YP_006015888.1 386319725 12611545 complement(1846422..1847291) 1 NC_017568.1 identified by match to protein family HMM PF01909; nucleotidyltransferase domain protein 1847291 12611545 SPSE_1798 Staphylococcus pseudintermedius ED99 nucleotidyltransferase domain protein YP_006015888.1 1846422 R 984892 CDS YP_006015889.1 386319726 12611546 complement(1847666..1848340) 1 NC_017568.1 transposase for insertion sequence element IS1182 1848340 12611546 SPSE_1799 Staphylococcus pseudintermedius ED99 transposase for insertion sequence element IS1182 YP_006015889.1 1847666 R 984892 CDS YP_006015890.1 386319727 12611547 complement(1848930..1849667) 1 NC_017568.1 identified by match to protein family HMM PF00398; rRNA adenine N-6-methyltransferase 1849667 ermA 12611547 ermA Staphylococcus pseudintermedius ED99 rRNA adenine N-6-methyltransferase YP_006015890.1 1848930 R 984892 CDS YP_006015891.1 386319728 12611548 complement(1849896..1850159) 1 NC_017568.1 hypothetical protein 1850159 12611548 SPSE_1801 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015891.1 1849896 R 984892 CDS YP_006015892.1 386319729 12611549 complement(1850299..1852443) 1 NC_017568.1 identified by match to protein family HMM PF01131, match to protein family HMM PF01396, match to protein family HMM PF01751, match to protein family HMM TIGR01056; type I topoisomerase 1852443 12611549 SPSE_1802 Staphylococcus pseudintermedius ED99 type I topoisomerase YP_006015892.1 1850299 R 984892 CDS YP_006015893.1 386319730 12611550 complement(1852443..1853060) 1 NC_017568.1 identified by match to protein family HMM PF00239; resolvase protein 1853060 12611550 SPSE_1803 Staphylococcus pseudintermedius ED99 resolvase protein YP_006015893.1 1852443 R 984892 CDS YP_006015894.1 386319731 12611551 complement(1853074..1853244) 1 NC_017568.1 hypothetical protein 1853244 12611551 SPSE_1804 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015894.1 1853074 R 984892 CDS YP_006015895.1 386319732 12611552 complement(1853591..1854403) 1 NC_017568.1 protein RepR, truncated 1854403 12611552 SPSE_1805 Staphylococcus pseudintermedius ED99 protein RepR, truncated YP_006015895.1 1853591 R 984892 CDS YP_006015896.1 386319733 12611553 1854431..1857865 1 NC_017568.1 identified by match to protein family HMM PF00746, match to protein family HMM PF01105, match to protein family HMM PF05738, match to protein family HMM TIGR01167; LPXTG-motif cell wall anchor domain-containing protein 1857865 spsI 12611553 spsI Staphylococcus pseudintermedius ED99 LPXTG-motif cell wall anchor domain-containing protein YP_006015896.1 1854431 D 984892 CDS YP_006015897.1 386319734 12611554 complement(1857961..1859475) 1 NC_017568.1 identified by match to protein family HMM PF00149, match to protein family HMM PF02872; 5' nucleotidase family protein 1859475 12611554 SPSE_1807 Staphylococcus pseudintermedius ED99 5' nucleotidase family protein YP_006015897.1 1857961 R 984892 CDS YP_006015898.1 386319735 12611555 1859829..1859957 1 NC_017568.1 hypothetical protein 1859957 12611555 SPSE_1808 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015898.1 1859829 D 984892 CDS YP_006015899.1 386319736 12611556 1859977..1861431 1 NC_017568.1 identified by match to protein family HMM PF00501, match to protein family HMM TIGR01733, match to protein family HMM TIGR01734; D-alanine--poly(phosphoribitol) ligase, subunit 1 1861431 dltA 12611556 dltA Staphylococcus pseudintermedius ED99 D-alanine--poly(phosphoribitol) ligase, subunit 1 YP_006015899.1 1859977 D 984892 CDS YP_006015900.1 386319737 12611557 1861428..1862645 1 NC_017568.1 identified by match to protein family HMM PF03062; D-alanine transport protein DltB 1862645 dltB 12611557 dltB Staphylococcus pseudintermedius ED99 D-alanine transport protein DltB YP_006015900.1 1861428 D 984892 CDS YP_006015901.1 386319738 12611558 1862658..1862894 1 NC_017568.1 identified by match to protein family HMM TIGR01688; D-alanine--poly(phosphoribitol) ligase, subunit 2 1862894 dltC 12611558 dltC Staphylococcus pseudintermedius ED99 D-alanine--poly(phosphoribitol) ligase, subunit 2 YP_006015901.1 1862658 D 984892 CDS YP_006015902.1 386319739 12611559 1862891..1864033 1 NC_017568.1 identified by match to protein family HMM PF04914, match to protein family HMM PF04915, match to protein family HMM PF04918; poly D-alanine transfer protein DltD 1864033 dltD 12611559 dltD Staphylococcus pseudintermedius ED99 poly D-alanine transfer protein DltD YP_006015902.1 1862891 D 984892 CDS YP_006015903.1 386319740 12611560 complement(1864620..1865987) 1 NC_017568.1 identified by match to protein family HMM PF02386; sodium transport family protein 1865987 12611560 SPSE_1813 Staphylococcus pseudintermedius ED99 sodium transport family protein YP_006015903.1 1864620 R 984892 CDS YP_006015904.1 386319741 12611561 complement(1865995..1867647) 1 NC_017568.1 identified by match to protein family HMM PF00089, match to protein family HMM PF00595; serine protease HtrA 1867647 htrA 12611561 htrA Staphylococcus pseudintermedius ED99 serine protease HtrA YP_006015904.1 1865995 R 984892 CDS YP_006015905.1 386319742 12611562 complement(1867958..1868761) 1 NC_017568.1 identified by match to protein family HMM PF03741; toxic anion resistance protein-like protein 1868761 12611562 SPSE_1815 Staphylococcus pseudintermedius ED99 toxic anion resistance protein-like protein YP_006015905.1 1867958 R 984892 CDS YP_006015906.1 386319743 12611563 complement(1869230..1870792) 1 NC_017568.1 identified by match to protein family HMM PF00009, match to protein family HMM PF03144, match to protein family HMM TIGR00231, match to protein family HMM TIGR00503; peptide chain release factor 3 1870792 prfC 12611563 prfC Staphylococcus pseudintermedius ED99 peptide chain release factor 3 YP_006015906.1 1869230 R 984892 CDS YP_006015907.1 386319744 12611564 complement(1870813..1871052) 1 NC_017568.1 hypothetical protein 1871052 12611564 SPSE_1818 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015907.1 1870813 R 984892 CDS YP_006015908.1 386319745 12611565 complement(1871042..1872526) 1 NC_017568.1 identified by match to protein family HMM PF01225, match to protein family HMM PF02875, match to protein family HMM PF08245, match to protein family HMM TIGR01085; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase 1872526 murE 12611565 murE Staphylococcus pseudintermedius ED99 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase YP_006015908.1 1871042 R 984892 CDS YP_006015909.1 386319746 12611566 1873196..1874371 1 NC_017568.1 identified by match to protein family HMM PF00534, match to protein family HMM PF02350, match to protein family HMM PF04101, match to protein family HMM PF06925; diacylglycerol glucosyltransferase 1874371 12611566 SPSE_1820 Staphylococcus pseudintermedius ED99 diacylglycerol glucosyltransferase YP_006015909.1 1873196 D 984892 CDS YP_006015910.1 386319747 12611567 1874349..1875533 1 NC_017568.1 identified by match to protein family HMM PF07690; putative glycolipid permease LtaA (Lipoteichoic acid protein A) 1875533 12611567 SPSE_1821 Staphylococcus pseudintermedius ED99 putative glycolipid permease LtaA (Lipoteichoic acid protein A) YP_006015910.1 1874349 D 984892 CDS YP_006015911.1 386319748 12611568 1875939..1877426 1 NC_017568.1 identified by match to protein family HMM PF00884; sulfatase 1877426 12611568 SPSE_1822 Staphylococcus pseudintermedius ED99 sulfatase YP_006015911.1 1875939 D 984892 CDS YP_006015912.1 386319749 12611569 1877531..1878427 1 NC_017568.1 identified by match to protein family HMM PF03609; PTS system, mannose/fructose/N-acetylgalactosamine-specific component IIC 1878427 12611569 SPSE_1823 Staphylococcus pseudintermedius ED99 PTS system, mannose/fructose/N-acetylgalactosamine-specific component IIC YP_006015912.1 1877531 D 984892 CDS YP_006015913.1 386319750 12611570 1878414..1879307 1 NC_017568.1 identified by match to protein family HMM PF03613; PTS system, mannose/fructose/N-acetylgalactosamine-specific component IID 1879307 12611570 SPSE_1824 Staphylococcus pseudintermedius ED99 PTS system, mannose/fructose/N-acetylgalactosamine-specific component IID YP_006015913.1 1878414 D 984892 CDS YP_006015914.1 386319751 12611571 complement(1879879..1880385) 1 NC_017568.1 identified by match to protein family HMM PF02834; hypothetical protein 1880385 12611571 SPSE_1825 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015914.1 1879879 R 984892 CDS YP_006015915.1 386319752 12611572 complement(1880439..1881173) 1 NC_017568.1 identified by match to protein family HMM PF00756; putative esterase 1881173 12611572 SPSE_1826 Staphylococcus pseudintermedius ED99 putative esterase YP_006015915.1 1880439 R 984892 CDS YP_006015916.1 386319753 12611573 complement(1881276..1882847) 1 NC_017568.1 identified by match to protein family HMM PF00324, match to protein family HMM PF01235, match to protein family HMM TIGR00835; sodium:alanine symporter family protein 1882847 12611573 SPSE_1827 Staphylococcus pseudintermedius ED99 sodium:alanine symporter family protein YP_006015916.1 1881276 R 984892 CDS YP_006015917.1 386319754 12611574 1883066..1884163 1 NC_017568.1 identified by match to protein family HMM PF01594; hypothetical protein 1884163 12611574 SPSE_1828 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015917.1 1883066 D 984892 CDS YP_006015918.1 386319755 12611575 complement(1884739..1886190) 1 NC_017568.1 identified by match to protein family HMM PF02012; putative sialidase, truncated 1886190 12611575 SPSE_1829 Staphylococcus pseudintermedius ED99 putative sialidase, truncated YP_006015918.1 1884739 R 984892 CDS YP_006015919.1 386319756 12611576 complement(1886241..1887689) 1 NC_017568.1 identified by match to protein family HMM PF07690, match to protein family HMM TIGR00792; sugar (Glycoside-Pentoside-Hexuronide) transporter 1887689 gph 12611576 gph Staphylococcus pseudintermedius ED99 sugar (Glycoside-Pentoside-Hexuronide) transporter YP_006015919.1 1886241 R 984892 CDS YP_006015920.1 386319757 12611577 complement(1887730..1888848) 1 NC_017568.1 identified by match to protein family HMM PF01408, match to protein family HMM PF02894, match to protein family HMM PF03447; putative oxidoreductase 1888848 12611577 SPSE_1831 Staphylococcus pseudintermedius ED99 putative oxidoreductase YP_006015920.1 1887730 R 984892 CDS YP_006015921.1 386319758 12611578 complement(1889353..1890120) 1 NC_017568.1 identified by match to protein family HMM PF00106; enoyl-ACP reductase 1890120 fabI 12611578 fabI Staphylococcus pseudintermedius ED99 enoyl-ACP reductase YP_006015921.1 1889353 R 984892 CDS YP_006015922.1 386319759 12611579 complement(1890270..1892105) 1 NC_017568.1 identified by match to protein family HMM PF00999, match to protein family HMM PF02080, match to protein family HMM PF02254; Na+/H+ antiporter protein 1892105 12611579 SPSE_1833 Staphylococcus pseudintermedius ED99 Na+/H+ antiporter protein YP_006015922.1 1890270 R 984892 CDS YP_006015923.1 386319760 12611580 complement(1892116..1893501) 1 NC_017568.1 identified by match to protein family HMM PF00571, match to protein family HMM PF01769, match to protein family HMM PF03448, match to protein family HMM TIGR00400; magnesium transporter 1893501 mgtE 12611580 mgtE Staphylococcus pseudintermedius ED99 magnesium transporter YP_006015923.1 1892116 R 984892 CDS YP_006015924.1 386319761 12611581 complement(1893530..1894384) 1 NC_017568.1 identified by match to protein family HMM PF00849, match to protein family HMM TIGR00005; ribosomal large subunit pseudouridine synthase D 1894384 12611581 SPSE_1835 Staphylococcus pseudintermedius ED99 ribosomal large subunit pseudouridine synthase D YP_006015924.1 1893530 R 984892 CDS YP_006015925.1 386319762 12611582 complement(1894381..1895190) 1 NC_017568.1 identified by match to protein family HMM PF01513; inorganic polyphosphate/ATP-NAD kinase 1895190 ppnK 12611582 ppnK Staphylococcus pseudintermedius ED99 inorganic polyphosphate/ATP-NAD kinase YP_006015925.1 1894381 R 984892 CDS YP_006015926.1 386319763 12611583 complement(1895202..1895840) 1 NC_017568.1 identified by match to protein family HMM PF04607; GTP pyrophosphokinase 1895840 relA2 12611583 relA2 Staphylococcus pseudintermedius ED99 GTP pyrophosphokinase YP_006015926.1 1895202 R 984892 CDS YP_006015927.1 386319764 12611584 complement(1895857..1896204) 1 NC_017568.1 hypothetical protein 1896204 12611584 SPSE_1838 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015927.1 1895857 R 984892 CDS YP_006015928.1 386319765 12611585 1896335..1896916 1 NC_017568.1 identified by match to protein family HMM PF01928; adenylate cyclase 1896916 12611585 SPSE_1839 Staphylococcus pseudintermedius ED99 adenylate cyclase YP_006015928.1 1896335 D 984892 CDS YP_006015929.1 386319766 12611586 1897264..1897635 1 NC_017568.1 identified by match to protein family HMM PF01152; globin family protein 1897635 12611586 SPSE_1840 Staphylococcus pseudintermedius ED99 globin family protein YP_006015929.1 1897264 D 984892 CDS YP_006015930.1 386319767 12611587 1897652..1898440 1 NC_017568.1 hypothetical protein 1898440 12611587 SPSE_1841 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015930.1 1897652 D 984892 CDS YP_006015931.1 386319768 12611588 complement(1898688..1899416) 1 NC_017568.1 identified by match to protein family HMM PF01435; peptidase, M48 family 1899416 12611588 SPSE_1842 Staphylococcus pseudintermedius ED99 peptidase, M48 family YP_006015931.1 1898688 R 984892 CDS YP_006015932.1 386319769 12611589 complement(1900107..1901915) 1 NC_017568.1 identified by match to protein family HMM PF01432, match to protein family HMM PF08439, match to protein family HMM TIGR00181; oligoendopeptidase F 1901915 pepF 12611589 pepF Staphylococcus pseudintermedius ED99 oligoendopeptidase F YP_006015932.1 1900107 R 984892 CDS YP_006015933.1 386319770 12611590 complement(1901989..1902954) 1 NC_017568.1 identified by match to protein family HMM PF06054; transcription factor 1902954 12611590 SPSE_1844 Staphylococcus pseudintermedius ED99 transcription factor YP_006015933.1 1901989 R 984892 CDS YP_006015934.1 386319771 12611591 complement(1903228..1903887) 1 NC_017568.1 identified by match to protein family HMM PF00746; LPXTG-motif cell wall anchor domain-containing protein 1903887 spsR 12611591 spsR Staphylococcus pseudintermedius ED99 LPXTG-motif cell wall anchor domain-containing protein YP_006015934.1 1903228 R 984892 CDS YP_006015935.1 386319772 12611592 complement(1903906..1904892) 1 NC_017568.1 identified by match to protein family HMM PF00089; trypsin domain-containing protein 1904892 12611592 SPSE_1846 Staphylococcus pseudintermedius ED99 trypsin domain-containing protein YP_006015935.1 1903906 R 984892 CDS YP_006015936.1 386319773 12611593 complement(1905589..1906287) 1 NC_017568.1 identified by match to protein family HMM PF05389; adapter protein MecA 1906287 mecA 12611593 mecA Staphylococcus pseudintermedius ED99 adapter protein MecA YP_006015936.1 1905589 R 984892 CDS YP_006015937.1 386319774 12611594 complement(1906621..1907016) 1 NC_017568.1 identified by match to protein family HMM PF03960, match to protein family HMM TIGR01617; regulatory protein spx 1907016 spxA 12611594 spxA Staphylococcus pseudintermedius ED99 regulatory protein spx YP_006015937.1 1906621 R 984892 CDS YP_006015938.1 386319775 12611595 1907328..1908317 1 NC_017568.1 identified by match to protein family HMM PF00579, match to protein family HMM TIGR00233; tryptophan-tRNA ligase 1908317 trpS 12611595 trpS Staphylococcus pseudintermedius ED99 tryptophan-tRNA ligase YP_006015938.1 1907328 D 984892 CDS YP_006015939.1 386319776 12611596 complement(1908930..1910594) 1 NC_017568.1 identified by match to protein family HMM PF00496; oligopeptide ABC transporter periplasmic oligopeptide-binding protein 1910594 12611596 SPSE_1850 Staphylococcus pseudintermedius ED99 oligopeptide ABC transporter periplasmic oligopeptide-binding protein YP_006015939.1 1908930 R 984892 CDS YP_006015940.1 386319777 12611597 complement(1910617..1911558) 1 NC_017568.1 identified by match to protein family HMM PF00005, match to protein family HMM PF08352; oligopeptide transport ATP-binding protein 1911558 12611597 SPSE_1851 Staphylococcus pseudintermedius ED99 oligopeptide transport ATP-binding protein YP_006015940.1 1910617 R 984892 CDS YP_006015941.1 386319778 12611598 complement(1911551..1912630) 1 NC_017568.1 identified by match to protein family HMM PF00005, match to protein family HMM PF08352, match to protein family HMM TIGR01727; oligopeptide transport ATP-binding protein 1912630 12611598 SPSE_1852 Staphylococcus pseudintermedius ED99 oligopeptide transport ATP-binding protein YP_006015941.1 1911551 R 984892 CDS YP_006015942.1 386319779 12611599 complement(1912645..1913706) 1 NC_017568.1 identified by match to protein family HMM PF00528; oligopeptide transport system permease 1913706 12611599 SPSE_1853 Staphylococcus pseudintermedius ED99 oligopeptide transport system permease YP_006015942.1 1912645 R 984892 CDS YP_006015943.1 386319780 12611600 complement(1913706..1914632) 1 NC_017568.1 identified by match to protein family HMM PF00528; oligopeptide transport system permease 1914632 12611600 SPSE_1854 Staphylococcus pseudintermedius ED99 oligopeptide transport system permease YP_006015943.1 1913706 R 984892 CDS YP_006015944.1 386319781 12611601 1914878..1915255 1 NC_017568.1 hypothetical protein 1915255 12611601 SPSE_1855 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015944.1 1914878 D 984892 CDS YP_006015945.1 386319782 12611602 complement(1915734..1916978) 1 NC_017568.1 identified by match to protein family HMM PF00109, match to protein family HMM PF02801, match to protein family HMM TIGR03150; 3-oxoacyl-ACP synthase 1916978 fabF 12611602 fabF Staphylococcus pseudintermedius ED99 3-oxoacyl-ACP synthase YP_006015945.1 1915734 R 984892 CDS YP_006015946.1 386319783 12611603 complement(1916997..1917938) 1 NC_017568.1 identified by match to protein family HMM PF08541, match to protein family HMM PF08545, match to protein family HMM TIGR00747; 3-oxoacyl-ACP synthase 1917938 fabH 12611603 fabH Staphylococcus pseudintermedius ED99 3-oxoacyl-ACP synthase YP_006015946.1 1916997 R 984892 CDS YP_006015947.1 386319784 12611604 1918088..1918285 1 NC_017568.1 hypothetical protein 1918285 12611604 SPSE_1858 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015947.1 1918088 D 984892 CDS YP_006015948.1 386319785 12611605 complement(1918436..1919341) 1 NC_017568.1 identified by match to protein family HMM PF03767, match to protein family HMM TIGR01533; acid phosphatase 5'-nucleotidase, lipoprotein e(P4) family 1919341 12611605 SPSE_1859 Staphylococcus pseudintermedius ED99 acid phosphatase 5'-nucleotidase, lipoprotein e(P4) family YP_006015948.1 1918436 R 984892 CDS YP_006015949.1 386319786 12611606 complement(1919709..1922330) 1 NC_017568.1 identified by match to protein family HMM PF00004, match to protein family HMM PF02861, match to protein family HMM PF07724, match to protein family HMM PF07728, match to protein family HMM TIGR03346; ATP-dependent chaperone protein ClpB 1922330 clpB 12611606 clpB Staphylococcus pseudintermedius ED99 ATP-dependent chaperone protein ClpB YP_006015949.1 1919709 R 984892 CDS YP_006015950.1 386319787 12611607 1922590..1922754 1 NC_017568.1 ISSep1-like transposase, truncated 1922754 12611607 SPSE_1861 Staphylococcus pseudintermedius ED99 ISSep1-like transposase, truncated YP_006015950.1 1922590 D 984892 CDS YP_006015951.1 386319788 12611608 complement(1922936..1924780) 1 NC_017568.1 identified by match to protein family HMM PF01757; putative acyltransferase 1924780 12611608 SPSE_1862 Staphylococcus pseudintermedius ED99 putative acyltransferase YP_006015951.1 1922936 R 984892 CDS YP_006015952.1 386319789 12611609 complement(1925050..1925358) 1 NC_017568.1 identified by match to protein family HMM PF01883; hypothetical protein 1925358 12611609 SPSE_1863 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015952.1 1925050 R 984892 CDS YP_006015953.1 386319790 12611610 1925472..1926296 1 NC_017568.1 identified by match to protein family HMM PF00702, match to protein family HMM PF05116, match to protein family HMM PF08282, match to protein family HMM TIGR00099, match to protein family HMM TIGR01484; cof family hydrolase 1926296 12611610 SPSE_1864 Staphylococcus pseudintermedius ED99 cof family hydrolase YP_006015953.1 1925472 D 984892 CDS YP_006015954.1 386319791 12611611 1926327..1927652 1 NC_017568.1 identified by match to protein family HMM PF00070, match to protein family HMM PF02852, match to protein family HMM PF07992, match to protein family HMM TIGR03385; coenzyme A disulfide reductase 1927652 cdr 12611611 cdr Staphylococcus pseudintermedius ED99 coenzyme A disulfide reductase YP_006015954.1 1926327 D 984892 CDS YP_006015955.1 386319792 12611612 complement(1927731..1929017) 1 NC_017568.1 identified by match to protein family HMM PF00078, match to protein family HMM PF08388; RNA-directed DNA polymerase 1929017 12611612 SPSE_1866 Staphylococcus pseudintermedius ED99 RNA-directed DNA polymerase YP_006015955.1 1927731 R 984892 CDS YP_006015956.1 386319793 12611613 complement(1929624..1930013) 1 NC_017568.1 identified by match to protein family HMM PF07457; hypothetical protein 1930013 12611613 SPSE_1867 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015956.1 1929624 R 984892 CDS YP_006015957.1 386319794 12611614 complement(1930349..1931254) 1 NC_017568.1 identified by match to protein family HMM PF01557; fumarylacetoacetate hydrolase family protein 1931254 12611614 SPSE_1868 Staphylococcus pseudintermedius ED99 fumarylacetoacetate hydrolase family protein YP_006015957.1 1930349 R 984892 CDS YP_006015958.1 386319795 12611615 complement(1931337..1934981) 1 NC_017568.1 identified by match to protein family HMM PF00580, match to protein family HMM TIGR02785; exonuclease RexA 1934981 rexA 12611615 rexA Staphylococcus pseudintermedius ED99 exonuclease RexA YP_006015958.1 1931337 R 984892 CDS YP_006015959.1 386319796 12611616 complement(1934978..1938442) 1 NC_017568.1 identified by match to protein family HMM TIGR02773; exonuclease RexB 1938442 rexB 12611616 rexB Staphylococcus pseudintermedius ED99 exonuclease RexB YP_006015959.1 1934978 R 984892 CDS YP_006015960.1 386319797 12611617 complement(1938661..1939239) 1 NC_017568.1 identified by match to protein family HMM PF00717, match to protein family HMM TIGR02227; signal peptidase IB 1939239 sipB 12611617 sipB Staphylococcus pseudintermedius ED99 signal peptidase IB YP_006015960.1 1938661 R 984892 CDS YP_006015961.1 386319798 12611618 complement(1939258..1939758) 1 NC_017568.1 identified by match to protein family HMM PF00717, match to protein family HMM TIGR02227; signal peptidase IA 1939758 sipA 12611618 sipA Staphylococcus pseudintermedius ED99 signal peptidase IA YP_006015961.1 1939258 R 984892 CDS YP_006015962.1 386319799 12611619 complement(1940020..1941351) 1 NC_017568.1 identified by match to protein family HMM PF00342; glucose-6-phosphate isomerase 1941351 pgi 12611619 pgi Staphylococcus pseudintermedius ED99 glucose-6-phosphate isomerase YP_006015962.1 1940020 R 984892 CDS YP_006015963.1 386319800 12611620 1941544..1942746 1 NC_017568.1 identified by match to protein family HMM PF00764, match to protein family HMM TIGR00032; argininosuccinate synthase 1942746 argG 12611620 argG Staphylococcus pseudintermedius ED99 argininosuccinate synthase YP_006015963.1 1941544 D 984892 CDS YP_006015964.1 386319801 12611621 1942739..1944130 1 NC_017568.1 identified by match to protein family HMM PF00206, match to protein family HMM TIGR00838; argininosuccinate lyase 1944130 argH 12611621 argH Staphylococcus pseudintermedius ED99 argininosuccinate lyase YP_006015964.1 1942739 D 984892 CDS YP_006015965.1 386319802 12611622 1944368..1945303 1 NC_017568.1 identified by match to protein family HMM PF03009; glycerophosphoryl diester phosphodiesterase 1945303 glpQ 12611622 glpQ Staphylococcus pseudintermedius ED99 glycerophosphoryl diester phosphodiesterase YP_006015965.1 1944368 D 984892 CDS YP_006015966.1 386319803 12611623 complement(1945616..1946860) 1 NC_017568.1 identified by match to protein family HMM PF00208, match to protein family HMM PF02812; NAD-specific glutamate dehydrogenase 1946860 gudB 12611623 gudB Staphylococcus pseudintermedius ED99 NAD-specific glutamate dehydrogenase YP_006015966.1 1945616 R 984892 CDS YP_006015967.1 386319804 12611624 complement(1946968..1948167) 1 NC_017568.1 identified by match to protein family HMM PF00202, match to protein family HMM TIGR01885; ornithine--oxo-acid transaminase 1948167 rocD 12611624 rocD Staphylococcus pseudintermedius ED99 ornithine--oxo-acid transaminase YP_006015967.1 1946968 R 984892 CDS YP_006015968.1 386319805 12611625 complement(1948343..1949887) 1 NC_017568.1 identified by match to protein family HMM PF00171, match to protein family HMM TIGR01237; delta-1-pyrroline-5-carboxylate dehydrogenase 1949887 pruA 12611625 pruA Staphylococcus pseudintermedius ED99 delta-1-pyrroline-5-carboxylate dehydrogenase YP_006015968.1 1948343 R 984892 CDS YP_006015969.1 386319806 12611626 1950297..1950686 1 NC_017568.1 identified by match to protein family HMM PF00575; S1 RNA binding domain-containing protein 1950686 12611626 SPSE_1880 Staphylococcus pseudintermedius ED99 S1 RNA binding domain-containing protein YP_006015969.1 1950297 D 984892 CDS YP_006015970.1 386319807 12611627 complement(1951120..1951365) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1951365 12611627 SPSE_1881 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015970.1 1951120 R 984892 CDS YP_006015971.1 386319808 12611628 1951999..1952199 1 NC_017568.1 identified by match to protein family HMM PF00313; cold shock protein B 1952199 cspB 12611628 cspB Staphylococcus pseudintermedius ED99 cold shock protein B YP_006015971.1 1951999 D 984892 CDS YP_006015972.1 386319809 12611629 complement(1952261..1952527) 1 NC_017568.1 identified by match to protein family HMM PF09723, match to protein family HMM TIGR02605; FmdB family regulatory protein 1952527 12611629 SPSE_1883 Staphylococcus pseudintermedius ED99 FmdB family regulatory protein YP_006015972.1 1952261 R 984892 CDS YP_006015973.1 386319810 12611630 complement(1952527..1953717) 1 NC_017568.1 identified by match to protein family HMM PF03069; formamidase 1953717 fmdA 12611630 fmdA Staphylococcus pseudintermedius ED99 formamidase YP_006015973.1 1952527 R 984892 CDS YP_006015974.1 386319811 12611631 complement(1953901..1954161) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1954161 12611631 SPSE_1885 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015974.1 1953901 R 984892 CDS YP_006015975.1 386319812 12611632 complement(1954183..1954776) 1 NC_017568.1 identified by match to protein family HMM PF00160; cyclophilin type peptidyl-prolyl cis-trans isomerase 1954776 12611632 SPSE_1886 Staphylococcus pseudintermedius ED99 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_006015975.1 1954183 R 984892 CDS YP_006015976.1 386319813 12611633 1954850..1955230 1 NC_017568.1 kinase-associated lipoprotein B 1955230 kapB 12611633 kapB Staphylococcus pseudintermedius ED99 kinase-associated lipoprotein B YP_006015976.1 1954850 D 984892 CDS YP_006015977.1 386319814 12611634 1955357..1957774 1 NC_017568.1 identified by match to protein family HMM PF00361, match to protein family HMM PF00662, match to protein family HMM TIGR00940; monovalent cation/H+ antiporter subunit A 1957774 mnhA 12611634 mnhA Staphylococcus pseudintermedius ED99 monovalent cation/H+ antiporter subunit A YP_006015977.1 1955357 D 984892 CDS YP_006015978.1 386319815 12611635 1957737..1958183 1 NC_017568.1 identified by match to protein family HMM PF04039; monovalent cation/H+ antiporter subunit B 1958183 mnhB 12611635 mnhB Staphylococcus pseudintermedius ED99 monovalent cation/H+ antiporter subunit B YP_006015978.1 1957737 D 984892 CDS YP_006015979.1 386319816 12611636 1958183..1958530 1 NC_017568.1 identified by match to protein family HMM PF00420; monovalent cation/H+ antiporter subunit C 1958530 mnhC 12611636 mnhC Staphylococcus pseudintermedius ED99 monovalent cation/H+ antiporter subunit C YP_006015979.1 1958183 D 984892 CDS YP_006015980.1 386319817 12611637 1958520..1960019 1 NC_017568.1 identified by match to protein family HMM PF00361; monovalent cation/H+ antiporter subunit D 1960019 mnhD 12611637 mnhD Staphylococcus pseudintermedius ED99 monovalent cation/H+ antiporter subunit D YP_006015980.1 1958520 D 984892 CDS YP_006015981.1 386319818 12611638 1960021..1960500 1 NC_017568.1 identified by match to protein family HMM PF01899; monovalent cation/H+ antiporter subunit E 1960500 mnhE 12611638 mnhE Staphylococcus pseudintermedius ED99 monovalent cation/H+ antiporter subunit E YP_006015981.1 1960021 D 984892 CDS YP_006015982.1 386319819 12611639 1960500..1960793 1 NC_017568.1 identified by match to protein family HMM PF04066; monovalent cation/H+ antiporter subunit F 1960793 mnhF 12611639 mnhF Staphylococcus pseudintermedius ED99 monovalent cation/H+ antiporter subunit F YP_006015982.1 1960500 D 984892 CDS YP_006015983.1 386319820 12611640 1960771..1961127 1 NC_017568.1 identified by match to protein family HMM PF03334, match to protein family HMM TIGR01300; monovalent cation/H+ antiporter subunit G 1961127 mnhG 12611640 mnhG Staphylococcus pseudintermedius ED99 monovalent cation/H+ antiporter subunit G YP_006015983.1 1960771 D 984892 CDS YP_006015984.1 386319821 12611641 complement(1962078..1962455) 1 NC_017568.1 identified by match to protein family HMM PF03061, match to protein family HMM TIGR00369; thioesterase family protein 1962455 12611641 SPSE_1895 Staphylococcus pseudintermedius ED99 thioesterase family protein YP_006015984.1 1962078 R 984892 CDS YP_006015985.1 386319822 12611642 complement(1962479..1963792) 1 NC_017568.1 identified by match to protein family HMM PF03553, match to protein family HMM PF03600, match to protein family HMM PF06808; Na+/H+ antiporter family protein 1963792 12611642 SPSE_1896 Staphylococcus pseudintermedius ED99 Na+/H+ antiporter family protein YP_006015985.1 1962479 R 984892 CDS YP_006015986.1 386319823 12611643 complement(1963930..1965417) 1 NC_017568.1 identified by match to protein family HMM PF00883, match to protein family HMM PF02789; cytosol aminopeptidase 1965417 12611643 SPSE_1897 Staphylococcus pseudintermedius ED99 cytosol aminopeptidase YP_006015986.1 1963930 R 984892 CDS YP_006015987.1 386319824 12611644 complement(1965682..1966884) 1 NC_017568.1 identified by match to protein family HMM PF00070, match to protein family HMM PF01266, match to protein family HMM PF07992; NADH dehydrogenase 1966884 12611644 SPSE_1898 Staphylococcus pseudintermedius ED99 NADH dehydrogenase YP_006015987.1 1965682 R 984892 CDS YP_006015988.1 386319825 12611645 complement(1967306..1967665) 1 NC_017568.1 identified by match to protein family HMM PF01521, match to protein family HMM TIGR00049; HesB domain protein 1967665 12611645 SPSE_1899 Staphylococcus pseudintermedius ED99 HesB domain protein YP_006015988.1 1967306 R 984892 CDS YP_006015989.1 386319826 12611646 complement(1967678..1967914) 1 NC_017568.1 identified by match to protein family HMM PF07293; hypothetical protein 1967914 12611646 SPSE_1900 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015989.1 1967678 R 984892 CDS YP_006015990.1 386319827 12611647 1968205..1969269 1 NC_017568.1 identified by match to protein family HMM PF00070, match to protein family HMM PF07992; pyridine nucleotide-disulfide oxidoreductase family protein 1969269 12611647 SPSE_1901 Staphylococcus pseudintermedius ED99 pyridine nucleotide-disulfide oxidoreductase family protein YP_006015990.1 1968205 D 984892 CDS YP_006015991.1 386319828 12611648 complement(1969621..1969959) 1 NC_017568.1 identified by match to protein family HMM PF07315; hypothetical protein 1969959 12611648 SPSE_1902 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015991.1 1969621 R 984892 CDS YP_006015992.1 386319829 12611649 1970063..1970305 1 NC_017568.1 identified by match to protein family HMM PF01106; nitrogen fixation protein NifU 1970305 12611649 SPSE_1903 Staphylococcus pseudintermedius ED99 nitrogen fixation protein NifU YP_006015992.1 1970063 D 984892 CDS YP_006015993.1 386319830 12611650 complement(1970891..1971856) 1 NC_017568.1 identified by match to protein family HMM PF00389, match to protein family HMM PF02826; glyoxylate reductase 1971856 12611650 SPSE_1904 Staphylococcus pseudintermedius ED99 glyoxylate reductase YP_006015993.1 1970891 R 984892 CDS YP_006015994.1 386319831 12611651 complement(1971863..1972648) 1 NC_017568.1 identified by match to protein family HMM PF00702, match to protein family HMM TIGR01457, match to protein family HMM TIGR01460; HAD-superfamily hydrolase 1972648 12611651 SPSE_1905 Staphylococcus pseudintermedius ED99 HAD-superfamily hydrolase YP_006015994.1 1971863 R 984892 CDS YP_006015995.1 386319832 12611652 complement(1972652..1973128) 1 NC_017568.1 identified by match to protein family HMM PF01934; hypothetical protein 1973128 12611652 SPSE_1906 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015995.1 1972652 R 984892 CDS YP_006015996.1 386319833 12611653 1973184..1973450 1 NC_017568.1 hypothetical protein 1973450 12611653 SPSE_1907 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015996.1 1973184 D 984892 CDS YP_006015997.1 386319834 12611654 complement(1974078..1974443) 1 NC_017568.1 identified by match to protein family HMM PF06265; hypothetical protein 1974443 12611654 SPSE_1908 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006015997.1 1974078 R 984892 CDS YP_006015998.1 386319835 12611655 complement(1974462..1975379) 1 NC_017568.1 identified by match to protein family HMM PF04055, match to protein family HMM TIGR00510; lipoic acid synthetase 1975379 lipA 12611655 lipA Staphylococcus pseudintermedius ED99 lipoic acid synthetase YP_006015998.1 1974462 R 984892 CDS YP_006015999.1 386319836 12611656 complement(1975465..1976784) 1 NC_017568.1 identified by match to protein family HMM PF00149; bifunctional; 5-nucleotidase/2,3-cyclic phosphodiesterase 1976784 12611656 SPSE_1910 Staphylococcus pseudintermedius ED99 5-nucleotidase/2,3-cyclic phosphodiesterase YP_006015999.1 1975465 R 984892 CDS YP_006016000.1 386319837 12611657 complement(1976801..1977625) 1 NC_017568.1 identified by match to protein family HMM PF01925; hypothetical protein 1977625 12611657 SPSE_1911 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016000.1 1976801 R 984892 CDS YP_006016001.1 386319838 12611658 complement(1977640..1978488) 1 NC_017568.1 identified by match to protein family HMM PF01904; hypothetical protein 1978488 12611658 SPSE_1912 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016001.1 1977640 R 984892 CDS YP_006016002.1 386319839 12611659 1978612..1979319 1 NC_017568.1 hypothetical protein 1979319 12611659 SPSE_1913 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016002.1 1978612 D 984892 CDS YP_006016003.1 386319840 12611660 complement(1979352..1979474) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1979474 12611660 SPSE_1914 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016003.1 1979352 R 984892 CDS YP_006016004.1 386319841 12611662 complement(1980384..1981382) 1 NC_017568.1 identified by match to protein family HMM PF00571, match to protein family HMM PF01595; hypothetical protein 1981382 12611662 SPSE_1917 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016004.1 1980384 R 984892 CDS YP_006016005.1 386319842 12611663 complement(1981672..1981956) 1 NC_017568.1 hypothetical protein 1981956 12611663 SPSE_1918 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016005.1 1981672 R 984892 CDS YP_006016006.1 386319843 12611664 complement(1982102..1983499) 1 NC_017568.1 identified by match to protein family HMM PF01458, match to protein family HMM TIGR01980; FeS assembly protein SufB 1983499 sufB 12611664 sufB Staphylococcus pseudintermedius ED99 FeS assembly protein SufB YP_006016006.1 1982102 R 984892 CDS YP_006016007.1 386319844 12611665 complement(1983597..1984046) 1 NC_017568.1 identified by match to protein family HMM PF01592, match to protein family HMM TIGR01994; NifU family SUF system FeS assembly protein 1984046 12611665 SPSE_1920 Staphylococcus pseudintermedius ED99 NifU family SUF system FeS assembly protein YP_006016007.1 1983597 R 984892 CDS YP_006016008.1 386319845 12611666 complement(1984036..1985277) 1 NC_017568.1 identified by match to protein family HMM PF00266, match to protein family HMM PF01212, match to protein family HMM TIGR01979; SufS subfamily cysteine desulfurase 1985277 sufS 12611666 sufS Staphylococcus pseudintermedius ED99 SufS subfamily cysteine desulfurase YP_006016008.1 1984036 R 984892 CDS YP_006016009.1 386319846 12611667 complement(1985306..1986613) 1 NC_017568.1 identified by match to protein family HMM PF01458, match to protein family HMM TIGR01981; FeS assembly protein SufD 1986613 sufD 12611667 sufD Staphylococcus pseudintermedius ED99 FeS assembly protein SufD YP_006016009.1 1985306 R 984892 CDS YP_006016010.1 386319847 12611668 complement(1986635..1987405) 1 NC_017568.1 identified by match to protein family HMM PF00005, match to protein family HMM TIGR01978; FeS assembly ATPase SufC 1987405 sufC 12611668 sufC Staphylococcus pseudintermedius ED99 FeS assembly ATPase SufC YP_006016010.1 1986635 R 984892 CDS YP_006016011.1 386319848 12611669 1987703..1988563 1 NC_017568.1 identified by match to protein family HMM PF04018; membrane protein 1988563 12611669 SPSE_1924 Staphylococcus pseudintermedius ED99 membrane protein YP_006016011.1 1987703 D 984892 CDS YP_006016012.1 386319849 12611670 complement(1988861..1989679) 1 NC_017568.1 identified by match to protein family HMM PF03180; putative lipoprotein 1989679 12611670 SPSE_1925 Staphylococcus pseudintermedius ED99 putative lipoprotein YP_006016012.1 1988861 R 984892 CDS YP_006016013.1 386319850 12611671 complement(1989808..1990629) 1 NC_017568.1 identified by match to protein family HMM PF03180; putative lipoprotein 1990629 12611671 SPSE_1926 Staphylococcus pseudintermedius ED99 putative lipoprotein YP_006016013.1 1989808 R 984892 CDS YP_006016014.1 386319851 12611672 complement(1990649..1991344) 1 NC_017568.1 identified by match to protein family HMM PF00528; ABC transporter permease 1991344 12611672 SPSE_1927 Staphylococcus pseudintermedius ED99 ABC transporter permease YP_006016014.1 1990649 R 984892 CDS YP_006016015.1 386319852 12611673 complement(1991337..1992365) 1 NC_017568.1 identified by match to protein family HMM PF00005, match to protein family HMM PF09383; ABC transporter ATP-binding protein 1992365 12611673 SPSE_1928 Staphylococcus pseudintermedius ED99 ABC transporter ATP-binding protein YP_006016015.1 1991337 R 984892 CDS YP_006016016.1 386319853 12611674 complement(1992385..1992507) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 1992507 12611674 SPSE_1929 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016016.1 1992385 R 984892 CDS YP_006016017.1 386319854 12611675 complement(1992608..1992925) 1 NC_017568.1 thioredoxin 1992925 12611675 SPSE_1931 Staphylococcus pseudintermedius ED99 thioredoxin YP_006016017.1 1992608 R 984892 CDS YP_006016018.1 386319855 12611676 complement(1992891..1993286) 1 NC_017568.1 identified by match to protein family HMM PF01751; Toprim domain-containing protein 1993286 12611676 SPSE_1932 Staphylococcus pseudintermedius ED99 Toprim domain-containing protein YP_006016018.1 1992891 R 984892 CDS YP_006016019.1 386319856 12611677 complement(1993365..1993745) 1 NC_017568.1 identified by match to protein family HMM PF01597, match to protein family HMM TIGR00527; glycine cleavage system H protein 1993745 gcvH 12611677 gcvH Staphylococcus pseudintermedius ED99 glycine cleavage system H protein YP_006016019.1 1993365 R 984892 CDS YP_006016020.1 386319857 12611678 complement(1993819..1994178) 1 NC_017568.1 identified by match to protein family HMM PF03960, match to protein family HMM TIGR01617; arsenate reductase 1994178 12611678 SPSE_1934 Staphylococcus pseudintermedius ED99 arsenate reductase YP_006016020.1 1993819 R 984892 CDS YP_006016021.1 386319858 12611679 1994460..1994780 1 NC_017568.1 identified by match to protein family HMM PF00085; thioredoxin 1994780 12611679 SPSE_1935 Staphylococcus pseudintermedius ED99 thioredoxin YP_006016021.1 1994460 D 984892 CDS YP_006016022.1 386319859 12611680 complement(1994910..1995455) 1 NC_017568.1 identified by match to protein family HMM PF00881; nitroreductase family protein 1995455 12611680 SPSE_1936 Staphylococcus pseudintermedius ED99 nitroreductase family protein YP_006016022.1 1994910 R 984892 CDS YP_006016023.1 386319860 12611681 complement(1995510..1996235) 1 NC_017568.1 identified by match to protein family HMM PF01487, match to protein family HMM TIGR01093; 3-dehydroquinate dehydratase 1996235 aroD 12611681 aroD Staphylococcus pseudintermedius ED99 3-dehydroquinate dehydratase YP_006016023.1 1995510 R 984892 CDS YP_006016024.1 386319861 12611682 complement(1996256..1997260) 1 NC_017568.1 identified by match to protein family HMM PF00389, match to protein family HMM PF01262, match to protein family HMM PF02826; D-lactate dehydrogenase 1997260 12611682 SPSE_1938 Staphylococcus pseudintermedius ED99 D-lactate dehydrogenase YP_006016024.1 1996256 R 984892 CDS YP_006016025.1 386319862 12611683 1997406..1997828 1 NC_017568.1 identified by match to protein family HMM PF02566, match to protein family HMM TIGR03561; organic hydroperoxide resistance protein 1997828 12611683 SPSE_1939 Staphylococcus pseudintermedius ED99 organic hydroperoxide resistance protein YP_006016025.1 1997406 D 984892 CDS YP_006016026.1 386319863 12611684 1998251..1998739 1 NC_017568.1 identified by match to protein family HMM PF00583; GNAT family acetyltransferase 1998739 12611684 SPSE_1940 Staphylococcus pseudintermedius ED99 GNAT family acetyltransferase YP_006016026.1 1998251 D 984892 CDS YP_006016027.1 386319864 12611685 1998750..1999121 1 NC_017568.1 hypothetical protein 1999121 12611685 SPSE_1941 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016027.1 1998750 D 984892 CDS YP_006016028.1 386319865 12611686 complement(1999178..2000401) 1 NC_017568.1 identified by match to protein family HMM PF00144; autolysis and methicillin resistant-related protein 2000401 fmtA 12611686 fmtA Staphylococcus pseudintermedius ED99 autolysis and methicillin resistant-related protein YP_006016028.1 1999178 R 984892 CDS YP_006016029.1 386319866 12611687 2000979..2001419 1 NC_017568.1 hypothetical protein 2001419 12611687 SPSE_1943 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016029.1 2000979 D 984892 CDS YP_006016030.1 386319867 12611688 2001451..2002227 1 NC_017568.1 identified by match to protein family HMM PF08861, match to protein family HMM PF08862; hypothetical protein 2002227 12611688 SPSE_1944 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016030.1 2001451 D 984892 CDS YP_006016031.1 386319868 12611689 complement(2002332..2002637) 1 NC_017568.1 hypothetical protein 2002637 12611689 SPSE_1945 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016031.1 2002332 R 984892 CDS YP_006016032.1 386319869 12611690 complement(2002729..2003151) 1 NC_017568.1 identified by match to protein family HMM PF00903; metallothiol transferase FosB 2003151 fosB 12611690 fosB Staphylococcus pseudintermedius ED99 metallothiol transferase FosB YP_006016032.1 2002729 R 984892 CDS YP_006016033.1 386319870 12611691 2004054..2004188 1 NC_017568.1 hypothetical protein 2004188 12611691 SPSE_1947 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016033.1 2004054 D 984892 CDS YP_006016034.1 386319871 12611692 2004201..2004992 1 NC_017568.1 identified by match to protein family HMM PF08861, match to protein family HMM PF08862; hypothetical protein 2004992 12611692 SPSE_1948 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016034.1 2004201 D 984892 CDS YP_006016035.1 386319872 12611693 2004985..2005116 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 2005116 12611693 SPSE_1949 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016035.1 2004985 D 984892 CDS YP_006016036.1 386319873 12611694 complement(2005186..2005980) 1 NC_017568.1 identified by match to protein family HMM PF01123, match to protein family HMM PF02876; enterotoxin SE-int 2005980 se-int 12611694 se-int Staphylococcus pseudintermedius ED99 enterotoxin SE-int YP_006016036.1 2005186 R 984892 CDS YP_006016037.1 386319874 12611696 complement(2006881..2007345) 1 NC_017568.1 identified by match to protein family HMM PF01668, match to protein family HMM TIGR00086; SsrA-binding protein 2007345 smpB 12611696 smpB Staphylococcus pseudintermedius ED99 SsrA-binding protein YP_006016037.1 2006881 R 984892 CDS YP_006016038.1 386319875 12611697 complement(2007361..2009718) 1 NC_017568.1 identified by match to protein family HMM PF00575, match to protein family HMM PF00773, match to protein family HMM PF08206, match to protein family HMM TIGR00358, match to protein family HMM TIGR02063; ribonuclease R 2009718 rnr 12611697 rnr Staphylococcus pseudintermedius ED99 ribonuclease R YP_006016038.1 2007361 R 984892 CDS YP_006016039.1 386319876 12611698 complement(2009773..2010513) 1 NC_017568.1 carboxylesterase 2010513 est 12611698 est Staphylococcus pseudintermedius ED99 carboxylesterase YP_006016039.1 2009773 R 984892 CDS YP_006016040.1 386319877 12611699 complement(2010612..2010845) 1 NC_017568.1 identified by match to protein family HMM PF03840, match to protein family HMM TIGR00810; preprotein translocase subunit SecG 2010845 secG 12611699 secG Staphylococcus pseudintermedius ED99 preprotein translocase subunit SecG YP_006016040.1 2010612 R 984892 CDS YP_006016041.1 386319878 12611700 complement(2010914..2011381) 1 NC_017568.1 hypothetical protein 2011381 12611700 SPSE_1956 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016041.1 2010914 R 984892 CDS YP_006016042.1 386319879 12611701 complement(2011518..2012822) 1 NC_017568.1 identified by match to protein family HMM PF00113, match to protein family HMM PF03952, match to protein family HMM TIGR01060; enolase 2012822 eno 12611701 eno Staphylococcus pseudintermedius ED99 enolase YP_006016042.1 2011518 R 984892 CDS YP_006016043.1 386319880 12611702 complement(2012950..2014467) 1 NC_017568.1 identified by match to protein family HMM PF01676, match to protein family HMM PF06415, match to protein family HMM TIGR01307; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 2014467 gpmI 12611702 gpmI Staphylococcus pseudintermedius ED99 2,3-bisphosphoglycerate-independent phosphoglycerate mutase YP_006016043.1 2012950 R 984892 CDS YP_006016044.1 386319881 12611703 complement(2014470..2015231) 1 NC_017568.1 identified by match to protein family HMM PF00121, match to protein family HMM TIGR00419; triose-phosphate isomerase 2015231 tpiA 12611703 tpiA Staphylococcus pseudintermedius ED99 triose-phosphate isomerase YP_006016044.1 2014470 R 984892 CDS YP_006016045.1 386319882 12611704 complement(2015277..2016467) 1 NC_017568.1 identified by match to protein family HMM PF00162; phosphoglycerate kinase 2016467 pgk 12611704 pgk Staphylococcus pseudintermedius ED99 phosphoglycerate kinase YP_006016045.1 2015277 R 984892 CDS YP_006016046.1 386319883 12611705 complement(2016599..2017606) 1 NC_017568.1 identified by match to protein family HMM PF00044, match to protein family HMM PF02800, match to protein family HMM TIGR01534; glyceraldehyde-3-phosphate dehydrogenase 2017606 gapA 12611705 gapA Staphylococcus pseudintermedius ED99 glyceraldehyde-3-phosphate dehydrogenase YP_006016046.1 2016599 R 984892 CDS YP_006016047.1 386319884 12611706 complement(2017669..2018706) 1 NC_017568.1 identified by match to protein family HMM PF04198; glycolytic operon regulator 2018706 gapR 12611706 gapR Staphylococcus pseudintermedius ED99 glycolytic operon regulator YP_006016047.1 2017669 R 984892 CDS YP_006016048.1 386319885 12611707 complement(2019337..2020008) 1 NC_017568.1 hypothetical protein 2020008 12611707 SPSE_1963 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016048.1 2019337 R 984892 CDS YP_006016049.1 386319886 12611708 complement(2020379..2020537) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 2020537 12611708 SPSE_1964 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016049.1 2020379 R 984892 CDS YP_006016050.1 386319887 12611709 2020819..2021721 1 NC_017568.1 identified by match to protein family HMM PF01370, match to protein family HMM PF07993, match to protein family HMM PF08338, match to protein family HMM TIGR01777; NAD dependent epimerase/dehydratase family protein 2021721 12611709 SPSE_1965 Staphylococcus pseudintermedius ED99 NAD dependent epimerase/dehydratase family protein YP_006016050.1 2020819 D 984892 CDS YP_006016051.1 386319888 12611710 complement(2022325..2022822) 1 NC_017568.1 identified by match to protein family HMM PF00583; phosphinothricin N-acetyltransferase 2022822 12611710 SPSE_1966 Staphylococcus pseudintermedius ED99 phosphinothricin N-acetyltransferase YP_006016051.1 2022325 R 984892 CDS YP_006016052.1 386319889 12611711 complement(2022919..2023506) 1 NC_017568.1 identified by match to protein family HMM PF00574, match to protein family HMM TIGR00493; ATP-dependent Clp protease, proteolytic subunit ClpP 2023506 clpP 12611711 clpP Staphylococcus pseudintermedius ED99 ATP-dependent Clp protease, proteolytic subunit ClpP YP_006016052.1 2022919 R 984892 CDS YP_006016053.1 386319890 12611713 complement(2024401..2024547) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 2024547 12611713 SPSE_1969 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016053.1 2024401 R 984892 CDS YP_006016054.1 386319891 12611714 complement(2024638..2025582) 1 NC_017568.1 identified by match to protein family HMM PF02650, match to protein family HMM TIGR00647; hypothetical protein 2025582 12611714 SPSE_1970 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016054.1 2024638 R 984892 CDS YP_006016055.1 386319892 12611715 complement(2025629..2026624) 1 NC_017568.1 identified by match to protein family HMM PF01933, match to protein family HMM TIGR01826; hypothetical protein 2026624 12611715 SPSE_1971 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016055.1 2025629 R 984892 CDS YP_006016056.1 386319893 12611716 complement(2026626..2027534) 1 NC_017568.1 identified by match to protein family HMM PF03668; P-loop ATPase family protein 2027534 12611716 SPSE_1972 Staphylococcus pseudintermedius ED99 P-loop ATPase family protein YP_006016056.1 2026626 R 984892 CDS YP_006016057.1 386319894 12611717 complement(2028140..2029072) 1 NC_017568.1 identified by match to protein family HMM PF00070, match to protein family HMM PF07992, match to protein family HMM TIGR01292; thioredoxin reductase 2029072 trxB 12611717 trxB Staphylococcus pseudintermedius ED99 thioredoxin reductase YP_006016057.1 2028140 R 984892 CDS YP_006016058.1 386319895 12611718 complement(2029135..2030574) 1 NC_017568.1 identified by match to protein family HMM PF00515, match to protein family HMM PF07719; hypothetical protein 2030574 12611718 SPSE_1974 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016058.1 2029135 R 984892 CDS YP_006016059.1 386319896 12611719 complement(2030594..2031079) 1 NC_017568.1 identified by match to protein family HMM PF00132; acetyltransferase 2031079 12611719 SPSE_1975 Staphylococcus pseudintermedius ED99 acetyltransferase YP_006016059.1 2030594 R 984892 CDS YP_006016060.1 386319897 12611720 complement(2031081..2031917) 1 NC_017568.1 identified by match to protein family HMM PF01790, match to protein family HMM TIGR00544; prolipoprotein diacylglyceryl transferase 2031917 lgt 12611720 lgt Staphylococcus pseudintermedius ED99 prolipoprotein diacylglyceryl transferase YP_006016060.1 2031081 R 984892 CDS YP_006016061.1 386319898 12611721 complement(2031917..2032858) 1 NC_017568.1 identified by match to protein family HMM PF02603, match to protein family HMM PF07475, match to protein family HMM TIGR00679; HPr(Ser) kinase/phosphatase 2032858 hprK 12611721 hprK Staphylococcus pseudintermedius ED99 HPr(Ser) kinase/phosphatase YP_006016061.1 2031917 R 984892 CDS YP_006016062.1 386319899 12611722 complement(2033368..2033718) 1 NC_017568.1 hypothetical protein 2033718 12611722 SPSE_1978 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016062.1 2033368 R 984892 CDS YP_006016063.1 386319900 12611723 complement(2033722..2036565) 1 NC_017568.1 identified by match to protein family HMM PF00005, match to protein family HMM TIGR00630; excinuclease ABC subunit A 2036565 uvrA 12611723 uvrA Staphylococcus pseudintermedius ED99 excinuclease ABC subunit A YP_006016063.1 2033722 R 984892 CDS YP_006016064.1 386319901 12611724 complement(2036571..2038553) 1 NC_017568.1 identified by match to protein family HMM PF00271, match to protein family HMM PF02151, match to protein family HMM PF04851, match to protein family HMM TIGR00631; excinuclease ABC subunit B 2038553 uvrB 12611724 uvrB Staphylococcus pseudintermedius ED99 excinuclease ABC subunit B YP_006016064.1 2036571 R 984892 CDS YP_006016065.1 386319902 12611725 complement(2038723..2038977) 1 NC_017568.1 hypothetical protein 2038977 12611725 SPSE_1981 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016065.1 2038723 R 984892 CDS YP_006016066.1 386319903 12611726 complement(2038974..2039615) 1 NC_017568.1 putative phosphohydrolase 2039615 12611726 SPSE_1982 Staphylococcus pseudintermedius ED99 putative phosphohydrolase YP_006016066.1 2038974 R 984892 CDS YP_006016067.1 386319904 12611727 complement(2039823..2040812) 1 NC_017568.1 identified by match to protein family HMM PF00472, match to protein family HMM PF03462, match to protein family HMM TIGR00020; peptide chain release factor 2 2040812 prfB 12611727 prfB Staphylococcus pseudintermedius ED99 peptide chain release factor 2 YP_006016067.1 2039823 R 984892 CDS YP_006016068.1 386319905 12611728 complement(2040967..2043495) 1 NC_017568.1 identified by match to protein family HMM PF00271, match to protein family HMM PF01043, match to protein family HMM PF02810, match to protein family HMM PF07516, match to protein family HMM PF07517, match to protein family HMM TIGR00963; Preprotein translocase subunit SecA 2043495 secA 12611728 secA Staphylococcus pseudintermedius ED99 Preprotein translocase subunit SecA YP_006016068.1 2040967 R 984892 CDS YP_006016069.1 386319906 12611729 complement(2043918..2044478) 1 NC_017568.1 identified by match to protein family HMM PF02482, match to protein family HMM TIGR00741; ribosomal subunit interface protein 2044478 12611729 SPSE_1985 Staphylococcus pseudintermedius ED99 ribosomal subunit interface protein YP_006016069.1 2043918 R 984892 CDS YP_006016070.1 386319907 12611730 complement(2044543..2045211) 1 NC_017568.1 competence protein F 2045211 12611730 SPSE_1986 Staphylococcus pseudintermedius ED99 competence protein F YP_006016070.1 2044543 R 984892 CDS YP_006016071.1 386319908 12611731 complement(2045208..2046494) 1 NC_017568.1 identified by match to protein family HMM PF00271, match to protein family HMM PF04851; ComF operon protein 1 2046494 12611731 SPSE_1987 Staphylococcus pseudintermedius ED99 ComF operon protein 1 YP_006016071.1 2045208 R 984892 CDS YP_006016072.1 386319909 12611732 complement(2046649..2047596) 1 NC_017568.1 identified by match to protein family HMM PF02645, match to protein family HMM TIGR00762; DegV family protein 2047596 12611732 SPSE_1988 Staphylococcus pseudintermedius ED99 DegV family protein YP_006016072.1 2046649 R 984892 CDS YP_006016073.1 386319910 12611733 2047831..2048466 1 NC_017568.1 identified by match to protein family HMM PF01205, match to protein family HMM PF09186, match to protein family HMM TIGR00257; hypothetical protein 2048466 12611733 SPSE_1989 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016073.1 2047831 D 984892 CDS YP_006016074.1 386319911 12611734 complement(2048622..2049680) 1 NC_017568.1 identified by match to protein family HMM PF00953; glycoside hydrolase family protein 2049680 12611734 SPSE_1990 Staphylococcus pseudintermedius ED99 glycoside hydrolase family protein YP_006016074.1 2048622 R 984892 CDS YP_006016075.1 386319912 12611735 2050110..2051180 1 NC_017568.1 identified by match to protein family HMM PF00990, match to protein family HMM PF07694, match to protein family HMM TIGR00254; diguanylate cyclase 2051180 12611735 SPSE_1991 Staphylococcus pseudintermedius ED99 diguanylate cyclase YP_006016075.1 2050110 D 984892 CDS YP_006016076.1 386319913 12611736 2051674..2052435 1 NC_017568.1 identified by match to protein family HMM PF06738; hypothetical protein 2052435 12611736 SPSE_1992 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016076.1 2051674 D 984892 CDS YP_006016077.1 386319914 12611737 2052451..2052954 1 NC_017568.1 hypothetical protein 2052954 12611737 SPSE_1993 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016077.1 2052451 D 984892 CDS YP_006016078.1 386319915 12611738 2052978..2054201 1 NC_017568.1 identified by match to protein family HMM PF01546, match to protein family HMM PF07687, match to protein family HMM TIGR01882; peptidase T 2054201 pepT 12611738 pepT Staphylococcus pseudintermedius ED99 peptidase T YP_006016078.1 2052978 D 984892 CDS YP_006016079.1 386319916 12611739 complement(2054354..2055469) 1 NC_017568.1 identified by match to protein family HMM PF02595, match to protein family HMM TIGR00045; glycerate kinase 2055469 12611739 SPSE_1995 Staphylococcus pseudintermedius ED99 glycerate kinase YP_006016079.1 2054354 R 984892 CDS YP_006016080.1 386319917 12611740 complement(2055824..2056144) 1 NC_017568.1 hypothetical protein 2056144 12611740 SPSE_1996 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016080.1 2055824 R 984892 CDS YP_006016081.1 386319918 12611741 complement(2056309..2057202) 1 NC_017568.1 lipoprotein 2057202 12611741 SPSE_1997 Staphylococcus pseudintermedius ED99 lipoprotein YP_006016081.1 2056309 R 984892 CDS YP_006016082.1 386319919 12611742 2057313..2057831 1 NC_017568.1 identified by match to protein family HMM PF04229; hypothetical protein 2057831 12611742 SPSE_1998 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016082.1 2057313 D 984892 CDS YP_006016083.1 386319920 12611743 2057976..2058905 1 NC_017568.1 identified by match to protein family HMM PF01565, match to protein family HMM PF02873, match to protein family HMM TIGR00179; UDP-N-acetylenolpyruvoylglucosamine reductase 2058905 murB 12611743 murB Staphylococcus pseudintermedius ED99 UDP-N-acetylenolpyruvoylglucosamine reductase YP_006016083.1 2057976 D 984892 CDS YP_006016084.1 386319921 12611744 2058930..2059244 1 NC_017568.1 identified by match to protein family HMM PF05495; hypothetical protein 2059244 12611744 SPSE_2000 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016084.1 2058930 D 984892 CDS YP_006016085.1 386319922 12611745 complement(2059626..2060588) 1 NC_017568.1 identified by match to protein family HMM PF00268; ribonucleoside-diphosphate reductase subunit beta 2060588 nrdF 12611745 nrdF Staphylococcus pseudintermedius ED99 ribonucleoside-diphosphate reductase subunit beta YP_006016085.1 2059626 R 984892 CDS YP_006016086.1 386319923 12611746 complement(2060816..2062921) 1 NC_017568.1 identified by match to protein family HMM PF00317, match to protein family HMM PF02867, match to protein family HMM PF08343, match to protein family HMM TIGR02506; ribonucleoside-diphosphate reductase subunit alpha 2062921 nrdE 12611746 nrdE Staphylococcus pseudintermedius ED99 ribonucleoside-diphosphate reductase subunit alpha YP_006016086.1 2060816 R 984892 CDS YP_006016087.1 386319924 12611747 complement(2062884..2063282) 1 NC_017568.1 identified by match to protein family HMM PF07972, match to protein family HMM TIGR00333; ribonucleotide reductase stimulatory protein 2063282 nrdI 12611747 nrdI Staphylococcus pseudintermedius ED99 ribonucleotide reductase stimulatory protein YP_006016087.1 2062884 R 984892 CDS YP_006016088.1 386319925 12611748 2063907..2064788 1 NC_017568.1 identified by match to protein family HMM PF00892; putative permease 2064788 12611748 SPSE_2004 Staphylococcus pseudintermedius ED99 putative permease YP_006016088.1 2063907 D 984892 CDS YP_006016089.1 386319926 12611749 2064808..2065308 1 NC_017568.1 identified by match to protein family HMM PF01227, match to protein family HMM TIGR03139; NADPH-dependent 7-cyano-7-deazaguanine reductase 2065308 queF 12611749 queF Staphylococcus pseudintermedius ED99 NADPH-dependent 7-cyano-7-deazaguanine reductase YP_006016089.1 2064808 D 984892 CDS YP_006016090.1 386319927 12611750 complement(2065622..2065804) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 2065804 12611750 SPSE_2006 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016090.1 2065622 R 984892 CDS YP_006016091.1 386319928 12611751 complement(2065851..2067176) 1 NC_017568.1 identified by match to protein family HMM TIGR02919; accessory Sec system glycosyltransferase GtfB2 2067176 gtfB2 12611751 gtfB2 Staphylococcus pseudintermedius ED99 accessory Sec system glycosyltransferase GtfB2 YP_006016091.1 2065851 R 984892 CDS YP_006016092.1 386319929 12611752 complement(2067178..2068659) 1 NC_017568.1 identified by match to protein family HMM PF00534, match to protein family HMM PF09318, match to protein family HMM TIGR02918; accessory Sec system glycosylation protein GtfA2 2068659 gtfA2 12611752 gtfA2 Staphylococcus pseudintermedius ED99 accessory Sec system glycosylation protein GtfA2 YP_006016092.1 2067178 R 984892 CDS YP_006016093.1 386319930 12611753 complement(2068946..2074486) 1 NC_017568.1 identified by match to protein family HMM PF04650, match to protein family HMM TIGR01167, match to protein family HMM TIGR01168; LPXTG-motif cell wall anchor domain-containing protein 2074486 spsO 12611753 spsO Staphylococcus pseudintermedius ED99 LPXTG-motif cell wall anchor domain-containing protein YP_006016093.1 2068946 R 984892 CDS YP_006016094.1 386319931 12611755 complement(2076172..2076288) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 2076288 12611755 SPSE_2012 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016094.1 2076172 R 984892 CDS YP_006016095.1 386319932 12611757 2078000..2079505 1 NC_017568.1 identified by match to protein family HMM PF00854, match to protein family HMM PF07690, match to protein family HMM TIGR00924; di-tripeptide ABC transporter 2079505 12611757 SPSE_2015 Staphylococcus pseudintermedius ED99 di-tripeptide ABC transporter YP_006016095.1 2078000 D 984892 CDS YP_006016096.1 386319933 12611758 2079856..2081358 1 NC_017568.1 identified by match to protein family HMM PF00854, match to protein family HMM PF07690, match to protein family HMM TIGR00924; di-tripeptide ABC transporter 2081358 12611758 SPSE_2016 Staphylococcus pseudintermedius ED99 di-tripeptide ABC transporter YP_006016096.1 2079856 D 984892 CDS YP_006016097.1 386319934 12611759 2081493..2082425 1 NC_017568.1 identified by match to protein family HMM PF00781, match to protein family HMM TIGR00147; hypothetical protein 2082425 12611759 SPSE_2017 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016097.1 2081493 D 984892 CDS YP_006016098.1 386319935 12611760 complement(2082511..2083047) 1 NC_017568.1 identified by match to protein family HMM PF06941; 5'(3')-deoxyribonucleotidase 2083047 12611760 SPSE_2018 Staphylococcus pseudintermedius ED99 5'(3')-deoxyribonucleotidase YP_006016098.1 2082511 R 984892 CDS YP_006016099.1 386319936 12611761 complement(2083148..2084197) 1 NC_017568.1 identified by match to protein family HMM PF00155, match to protein family HMM TIGR01141; histidinol-phosphate transaminase 2084197 12611761 SPSE_2019 Staphylococcus pseudintermedius ED99 histidinol-phosphate transaminase YP_006016099.1 2083148 R 984892 CDS YP_006016100.1 386319937 12611762 complement(2084522..2086039) 1 NC_017568.1 identified by match to protein family HMM PF00528, match to protein family HMM PF04069; glycine betaine/carnitine/choline transport system permease protein 2086039 12611762 SPSE_2020 Staphylococcus pseudintermedius ED99 glycine betaine/carnitine/choline transport system permease protein YP_006016100.1 2084522 R 984892 CDS YP_006016101.1 386319938 12611763 complement(2086036..2086995) 1 NC_017568.1 identified by match to protein family HMM PF00005; glycine betaine/carnitine/choline transport ATP-binding protein 2086995 12611763 SPSE_2021 Staphylococcus pseudintermedius ED99 glycine betaine/carnitine/choline transport ATP-binding protein YP_006016101.1 2086036 R 984892 CDS YP_006016102.1 386319939 12611764 complement(2087234..2089015) 1 NC_017568.1 identified by match to protein family HMM PF00270, match to protein family HMM PF00271, match to protein family HMM PF00570, match to protein family HMM PF09382, match to protein family HMM TIGR00614, match to protein family HMM TIGR01389; ATP-dependent DNA helicase RecQ 2089015 recQ2 12611764 recQ2 Staphylococcus pseudintermedius ED99 ATP-dependent DNA helicase RecQ YP_006016102.1 2087234 R 984892 CDS YP_006016103.1 386319940 12611765 complement(2089025..2090902) 1 NC_017568.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 2090902 12611765 SPSE_2023 Staphylococcus pseudintermedius ED99 ABC transporter ATP-binding protein YP_006016103.1 2089025 R 984892 CDS YP_006016104.1 386319941 12611766 2091014..2091829 1 NC_017568.1 identified by match to protein family HMM PF02535; zinc/iron permease 2091829 12611766 SPSE_2024 Staphylococcus pseudintermedius ED99 zinc/iron permease YP_006016104.1 2091014 D 984892 CDS YP_006016105.1 386319942 12611767 complement(2091971..2093908) 1 NC_017568.1 identified by match to protein family HMM PF00884; glycerol phosphate lipoteichoic acid synthase 2093908 ltaS 12611767 ltaS Staphylococcus pseudintermedius ED99 glycerol phosphate lipoteichoic acid synthase YP_006016105.1 2091971 R 984892 CDS YP_006016106.1 386319943 12611768 complement(2094253..2095257) 1 NC_017568.1 identified by match to protein family HMM PF02626; allophanate hydrolase subunit 2 2095257 12611768 SPSE_2026 Staphylococcus pseudintermedius ED99 allophanate hydrolase subunit 2 YP_006016106.1 2094253 R 984892 CDS YP_006016107.1 386319944 12611769 complement(2095254..2095937) 1 NC_017568.1 identified by match to protein family HMM PF02682; urea amidolyase 2095937 12611769 SPSE_2027 Staphylococcus pseudintermedius ED99 urea amidolyase YP_006016107.1 2095254 R 984892 CDS YP_006016108.1 386319945 12611770 complement(2095948..2096157) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 2096157 12611770 SPSE_2028 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016108.1 2095948 R 984892 CDS YP_006016109.1 386319946 12611772 complement(2096777..2097925) 1 NC_017568.1 identified by match to protein family HMM PF00425; para-aminobenzoate synthase component I 2097925 pabB 12611772 pabB Staphylococcus pseudintermedius ED99 para-aminobenzoate synthase component I YP_006016109.1 2096777 R 984892 CDS YP_006016110.1 386319947 12611773 complement(2097909..2098502) 1 NC_017568.1 identified by match to protein family HMM PF00117, match to protein family HMM TIGR00566; para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II 2098502 pabA 12611773 pabA Staphylococcus pseudintermedius ED99 para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II YP_006016110.1 2097909 R 984892 CDS YP_006016111.1 386319948 12611774 2098763..2099431 1 NC_017568.1 identified by match to protein family HMM PF06508, match to protein family HMM TIGR00364; queuosine biosynthesis protein QueC 2099431 queC 12611774 queC Staphylococcus pseudintermedius ED99 queuosine biosynthesis protein QueC YP_006016111.1 2098763 D 984892 CDS YP_006016112.1 386319949 12611775 2099431..2099862 1 NC_017568.1 identified by match to protein family HMM PF01242, match to protein family HMM TIGR03367; 6-pyruvoyl tetrahydrobiopterin synthase 2099862 12611775 SPSE_2034 Staphylococcus pseudintermedius ED99 6-pyruvoyl tetrahydrobiopterin synthase YP_006016112.1 2099431 D 984892 CDS YP_006016113.1 386319950 12611776 2099855..2100568 1 NC_017568.1 identified by match to protein family HMM PF04055, match to protein family HMM TIGR03365; coenzyme PQQ synthesis-like protein 2100568 queE 12611776 queE Staphylococcus pseudintermedius ED99 coenzyme PQQ synthesis-like protein YP_006016113.1 2099855 D 984892 CDS YP_006016114.1 386319951 12611777 2100716..2101315 1 NC_017568.1 hypothetical protein 2101315 12611777 SPSE_2036 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016114.1 2100716 D 984892 CDS YP_006016115.1 386319952 12611778 2101386..2101640 1 NC_017568.1 identified by match to protein family HMM PF04226; hypothetical protein 2101640 12611778 SPSE_2037 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016115.1 2101386 D 984892 CDS YP_006016116.1 386319953 12611779 complement(2101813..2102793) 1 NC_017568.1 identified by match to protein family HMM PF00535; glycosyl transferase family protein 2102793 12611779 SPSE_2038 Staphylococcus pseudintermedius ED99 glycosyl transferase family protein YP_006016116.1 2101813 R 984892 CDS YP_006016117.1 386319954 12611780 complement(2103610..2104965) 1 NC_017568.1 identified by match to protein family HMM PF00571, match to protein family HMM PF01595, match to protein family HMM PF03471; hemolysin 2104965 12611780 SPSE_2039 Staphylococcus pseudintermedius ED99 hemolysin YP_006016117.1 2103610 R 984892 CDS YP_006016118.1 386319955 12611781 complement(2105384..2107282) 1 NC_017568.1 identified by match to protein family HMM PF00359, match to protein family HMM PF02378, match to protein family HMM PF02379, match to protein family HMM TIGR00829, match to protein family HMM TIGR00848, match to protein family HMM TIGR01427; PTS system D-fructose-specific transporter subunit IIABC 2107282 fruA 12611781 fruA Staphylococcus pseudintermedius ED99 PTS system D-fructose-specific transporter subunit IIABC YP_006016118.1 2105384 R 984892 CDS YP_006016119.1 386319956 12611782 complement(2107284..2108207) 1 NC_017568.1 identified by match to protein family HMM PF00294, match to protein family HMM TIGR03168; 1-phosphofructokinase 2108207 fruK 12611782 fruK Staphylococcus pseudintermedius ED99 1-phosphofructokinase YP_006016119.1 2107284 R 984892 CDS YP_006016120.1 386319957 12611783 complement(2108207..2108959) 1 NC_017568.1 identified by match to protein family HMM PF00455, match to protein family HMM PF08220; transcription repressor of fructose operon 2108959 12611783 SPSE_2042 Staphylococcus pseudintermedius ED99 transcription repressor of fructose operon YP_006016120.1 2108207 R 984892 CDS YP_006016121.1 386319958 12611784 2109221..2109430 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 2109430 12611784 SPSE_2043 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016121.1 2109221 D 984892 CDS YP_006016122.1 386319959 12611785 2109541..2109744 1 NC_017568.1 hypothetical protein 2109744 12611785 SPSE_2044 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016122.1 2109541 D 984892 CDS YP_006016123.1 386319960 12611786 complement(2109789..2109968) 1 NC_017568.1 hypothetical protein 2109968 12611786 SPSE_2045 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016123.1 2109789 R 984892 CDS YP_006016124.1 386319961 12611787 complement(2110118..2110597) 1 NC_017568.1 identified by match to protein family HMM PF04073, match to protein family HMM TIGR00011; ebsC protein 2110597 12611787 SPSE_2046 Staphylococcus pseudintermedius ED99 ebsC protein YP_006016124.1 2110118 R 984892 CDS YP_006016125.1 386319962 12611788 complement(2110620..2112944) 1 NC_017568.1 identified by match to protein family HMM PF04464; putative glycosyltransferase 2112944 12611788 SPSE_2047 Staphylococcus pseudintermedius ED99 putative glycosyltransferase YP_006016125.1 2110620 R 984892 CDS YP_006016126.1 386319963 12611789 complement(2113082..2114248) 1 NC_017568.1 identified by match to protein family HMM PF00083, match to protein family HMM PF07690; quinolone resistance protein NorA 2114248 norA 12611789 norA Staphylococcus pseudintermedius ED99 quinolone resistance protein NorA YP_006016126.1 2113082 R 984892 CDS YP_006016127.1 386319964 12611790 2114566..2115183 1 NC_017568.1 identified by match to protein family HMM PF07099; membrane protein 2115183 12611790 SPSE_2049 Staphylococcus pseudintermedius ED99 membrane protein YP_006016127.1 2114566 D 984892 CDS YP_006016128.1 386319965 12611791 2115282..2115452 1 NC_017568.1 hypothetical protein 2115452 12611791 SPSE_2050 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016128.1 2115282 D 984892 CDS YP_006016129.1 386319966 12611792 2115487..2116197 1 NC_017568.1 identified by match to protein family HMM PF02517; metal-dependent membrane protease 2116197 12611792 SPSE_2051 Staphylococcus pseudintermedius ED99 metal-dependent membrane protease YP_006016129.1 2115487 D 984892 CDS YP_006016130.1 386319967 12611793 complement(2116328..2117266) 1 NC_017568.1 identified by match to protein family HMM PF00056, match to protein family HMM PF02866, match to protein family HMM TIGR01763; malate dehydrogenase 2117266 mdh 12611793 mdh Staphylococcus pseudintermedius ED99 malate dehydrogenase YP_006016130.1 2116328 R 984892 CDS YP_006016131.1 386319968 12611794 complement(2117419..2118057) 1 NC_017568.1 abortive phage resistance protein 2118057 12611794 SPSE_2053 Staphylococcus pseudintermedius ED99 abortive phage resistance protein YP_006016131.1 2117419 R 984892 CDS YP_006016132.1 386319969 12611795 complement(2118050..2119381) 1 NC_017568.1 abortive phage resistance protein 2119381 12611795 SPSE_2054 Staphylococcus pseudintermedius ED99 abortive phage resistance protein YP_006016132.1 2118050 R 984892 CDS YP_006016133.1 386319970 12611796 complement(2119566..2119847) 1 NC_017568.1 hypothetical protein 2119847 12611796 SPSE_2055 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016133.1 2119566 R 984892 CDS YP_006016134.1 386319971 12611797 complement(2119930..2120838) 1 NC_017568.1 identified by match to protein family HMM PF00248; oxidoreductase, aldo/keto reductase family 2120838 12611797 SPSE_2056 Staphylococcus pseudintermedius ED99 oxidoreductase, aldo/keto reductase family YP_006016134.1 2119930 R 984892 CDS YP_006016135.1 386319972 12611798 complement(2120865..2121794) 1 NC_017568.1 identified by match to protein family HMM PF02492, match to protein family HMM PF07683; cobalamin synthesis protein/P47K family protein 2121794 12611798 SPSE_2057 Staphylococcus pseudintermedius ED99 cobalamin synthesis protein/P47K family protein YP_006016135.1 2120865 R 984892 CDS YP_006016136.1 386319973 12611799 2122026..2122463 1 NC_017568.1 identified by match to protein family HMM PF01047, match to protein family HMM PF03965; HTH-type transcriptional regulator MgrA 2122463 mgrA 12611799 mgrA Staphylococcus pseudintermedius ED99 HTH-type transcriptional regulator MgrA YP_006016136.1 2122026 D 984892 CDS YP_006016137.1 386319974 12611800 complement(2122849..2124510) 1 NC_017568.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 2124510 12611800 SPSE_2059 Staphylococcus pseudintermedius ED99 ABC transporter ATP-binding protein YP_006016137.1 2122849 R 984892 CDS YP_006016138.1 386319975 12611801 complement(2124511..2126148) 1 NC_017568.1 identified by match to protein family HMM PF00005, match to protein family HMM PF00664; ABC transporter ATP-binding protein 2126148 12611801 SPSE_2060 Staphylococcus pseudintermedius ED99 ABC transporter ATP-binding protein YP_006016138.1 2124511 R 984892 CDS YP_006016139.1 386319976 12611802 2126427..2127281 1 NC_017568.1 identified by match to protein family HMM PF02673, match to protein family HMM TIGR00753; undecaprenyl-diphosphatase UppP 2127281 uppP 12611802 uppP Staphylococcus pseudintermedius ED99 undecaprenyl-diphosphatase UppP YP_006016139.1 2126427 D 984892 CDS YP_006016140.1 386319977 12611803 2127665..2128654 1 NC_017568.1 hypothetical protein 2128654 12611803 SPSE_2062 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016140.1 2127665 D 984892 CDS YP_006016141.1 386319978 12611804 2128655..2129101 1 NC_017568.1 identified by match to protein family HMM PF02639; hypothetical protein 2129101 12611804 SPSE_2063 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016141.1 2128655 D 984892 CDS YP_006016142.1 386319979 12611805 2129199..2129768 1 NC_017568.1 identified by match to protein family HMM PF03641, match to protein family HMM TIGR00730; decarboxylase family protein 2129768 12611805 SPSE_2064 Staphylococcus pseudintermedius ED99 decarboxylase family protein YP_006016142.1 2129199 D 984892 CDS YP_006016143.1 386319980 12611806 complement(2130579..2131127) 1 NC_017568.1 identified by match to protein family HMM PF00583; GNAT family acetyltransferase 2131127 12611806 SPSE_2065 Staphylococcus pseudintermedius ED99 GNAT family acetyltransferase YP_006016143.1 2130579 R 984892 CDS YP_006016144.1 386319981 12611807 complement(2131337..2131636) 1 NC_017568.1 hypothetical protein 2131636 12611807 SPSE_2066 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016144.1 2131337 R 984892 CDS YP_006016145.1 386319982 12611808 complement(2131759..2132094) 1 NC_017568.1 lipoprotein 2132094 12611808 SPSE_2067 Staphylococcus pseudintermedius ED99 lipoprotein YP_006016145.1 2131759 R 984892 CDS YP_006016146.1 386319983 12611809 complement(2132164..2132619) 1 NC_017568.1 identified by match to protein family HMM PF00583; GNAT family acetyltransferase 2132619 12611809 SPSE_2068 Staphylococcus pseudintermedius ED99 GNAT family acetyltransferase YP_006016146.1 2132164 R 984892 CDS YP_006016147.1 386319984 12611810 2132718..2133401 1 NC_017568.1 hypothetical protein 2133401 12611810 SPSE_2069 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016147.1 2132718 D 984892 CDS YP_006016148.1 386319985 12611811 complement(2133486..2133977) 1 NC_017568.1 identified by match to protein family HMM PF04306; hypothetical protein 2133977 12611811 SPSE_2070 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016148.1 2133486 R 984892 CDS YP_006016149.1 386319986 12611812 complement(2133999..2135204) 1 NC_017568.1 identified by match to protein family HMM PF07690; sugar efflux transporter 2135204 12611812 SPSE_2071 Staphylococcus pseudintermedius ED99 sugar efflux transporter YP_006016149.1 2133999 R 984892 CDS YP_006016150.1 386319987 12611813 complement(2135284..2136153) 1 NC_017568.1 identified by match to protein family HMM PF00126, match to protein family HMM PF03466; LysR family transcriptional regulator 2136153 12611813 SPSE_2072 Staphylococcus pseudintermedius ED99 LysR family transcriptional regulator YP_006016150.1 2135284 R 984892 CDS YP_006016151.1 386319988 12611814 complement(2136242..2136838) 1 NC_017568.1 identified by match to protein family HMM PF04167; hypothetical protein 2136838 12611814 SPSE_2073 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016151.1 2136242 R 984892 CDS YP_006016152.1 386319989 12611815 complement(2137161..2137640) 1 NC_017568.1 identified by match to protein family HMM PF06172; hypothetical protein 2137640 12611815 SPSE_2074 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016152.1 2137161 R 984892 CDS YP_006016153.1 386319990 12611816 complement(2137659..2138375) 1 NC_017568.1 identified by match to protein family HMM PF01709, match to protein family HMM TIGR01033; hypothetical protein 2138375 12611816 SPSE_2075 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016153.1 2137659 R 984892 CDS YP_006016154.1 386319991 12611817 complement(2138451..2139455) 1 NC_017568.1 identified by match to protein family HMM PF00899, match to protein family HMM PF05237; HesA/MoeB/ThiF family protein 2139455 12611817 SPSE_2076 Staphylococcus pseudintermedius ED99 HesA/MoeB/ThiF family protein YP_006016154.1 2138451 R 984892 CDS YP_006016155.1 386319992 12611818 complement(2139455..2140222) 1 NC_017568.1 identified by match to protein family HMM PF05690; thiazole biosynthesis protein ThiG 2140222 thiG 12611818 thiG Staphylococcus pseudintermedius ED99 thiazole biosynthesis protein ThiG YP_006016155.1 2139455 R 984892 CDS YP_006016156.1 386319993 12611819 complement(2140226..2140426) 1 NC_017568.1 identified by match to protein family HMM PF02597, match to protein family HMM TIGR01683; thiamine biosynthesis protein ThiS 2140426 thiS 12611819 thiS Staphylococcus pseudintermedius ED99 thiamine biosynthesis protein ThiS YP_006016156.1 2140226 R 984892 CDS YP_006016157.1 386319994 12611820 complement(2140427..2141014) 1 NC_017568.1 identified by match to protein family HMM PF02581; thiamine monophosphate synthase 2141014 12611820 SPSE_2079 Staphylococcus pseudintermedius ED99 thiamine monophosphate synthase YP_006016157.1 2140427 R 984892 CDS YP_006016158.1 386319995 12611821 complement(2141222..2141842) 1 NC_017568.1 hypothetical protein 2141842 12611821 SPSE_2081 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016158.1 2141222 R 984892 CDS YP_006016159.1 386319996 12611822 2142183..2143010 1 NC_017568.1 identified by match to protein family HMM PF01476, match to protein family HMM PF05257; secretory antigen precursor SsaA 2143010 12611822 SPSE_2082 Staphylococcus pseudintermedius ED99 secretory antigen precursor SsaA YP_006016159.1 2142183 D 984892 CDS YP_006016160.1 386319997 12611823 complement(2143271..2144272) 1 NC_017568.1 identified by match to protein family HMM PF01384; phosphate transporter family protein 2144272 12611823 SPSE_2083 Staphylococcus pseudintermedius ED99 phosphate transporter family protein YP_006016160.1 2143271 R 984892 CDS YP_006016161.1 386319998 12611824 complement(2144287..2144904) 1 NC_017568.1 identified by match to protein family HMM PF01865; hypothetical protein 2144904 12611824 SPSE_2084 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016161.1 2144287 R 984892 CDS YP_006016162.1 386319999 12611825 complement(2145658..2147556) 1 NC_017568.1 identified by match to protein family HMM PF02687; ABC transporter permease 2147556 12611825 SPSE_2085 Staphylococcus pseudintermedius ED99 ABC transporter permease YP_006016162.1 2145658 R 984892 CDS YP_006016163.1 386320000 12611826 complement(2147546..2148307) 1 NC_017568.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 2148307 vraD 12611826 vraD Staphylococcus pseudintermedius ED99 ABC transporter ATP-binding protein YP_006016163.1 2147546 R 984892 CDS YP_006016164.1 386320001 12611827 complement(2148413..2149435) 1 NC_017568.1 identified by match to protein family HMM PF02518; two-component sensor histidine kinase 2149435 graS 12611827 graS Staphylococcus pseudintermedius ED99 two-component sensor histidine kinase YP_006016164.1 2148413 R 984892 CDS YP_006016165.1 386320002 12611828 complement(2149422..2150102) 1 NC_017568.1 identified by match to protein family HMM PF00072, match to protein family HMM PF00486; two-component response regulator 2150102 graR 12611828 graR Staphylococcus pseudintermedius ED99 two-component response regulator YP_006016165.1 2149422 R 984892 CDS YP_006016166.1 386320003 12611829 complement(2150108..2151028) 1 NC_017568.1 hypothetical protein 2151028 12611829 SPSE_2089 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016166.1 2150108 R 984892 CDS YP_006016167.1 386320004 12611830 2151189..2151710 1 NC_017568.1 identified by match to protein family HMM PF00583; GNAT family acetyltransferase 2151710 12611830 SPSE_2090 Staphylococcus pseudintermedius ED99 GNAT family acetyltransferase YP_006016167.1 2151189 D 984892 CDS YP_006016168.1 386320005 12611831 complement(2151975..2153000) 1 NC_017568.1 identified by match to protein family HMM PF07859; lipase 2153000 12611831 SPSE_2091 Staphylococcus pseudintermedius ED99 lipase YP_006016168.1 2151975 R 984892 CDS YP_006016169.1 386320006 12611832 complement(2153043..2154110) 1 NC_017568.1 hypothetical protein 2154110 12611832 SPSE_2092 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016169.1 2153043 R 984892 CDS YP_006016170.1 386320007 12611833 complement(2154617..2156065) 1 NC_017568.1 identified by match to protein family HMM PF07690, match to protein family HMM TIGR00711; lincomycin resistance protein LmrB 2156065 12611833 SPSE_2093 Staphylococcus pseudintermedius ED99 lincomycin resistance protein LmrB YP_006016170.1 2154617 R 984892 CDS YP_006016171.1 386320008 12611834 complement(2156332..2157651) 1 NC_017568.1 identified by match to protein family HMM PF01610; transposase for ISSps1 2157651 12611834 SPSE_2094 Staphylococcus pseudintermedius ED99 transposase for ISSps1 YP_006016171.1 2156332 R 984892 CDS YP_006016172.1 386320009 12611835 complement(2157842..2158339) 1 NC_017568.1 hypothetical protein 2158339 12611835 SPSE_2095 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016172.1 2157842 R 984892 CDS YP_006016173.1 386320010 12611836 complement(2158506..2159522) 1 NC_017568.1 identified by match to protein family HMM PF01032; ferrichrome transport system permease FhuG 2159522 fhuG 12611836 fhuG Staphylococcus pseudintermedius ED99 ferrichrome transport system permease FhuG YP_006016173.1 2158506 R 984892 CDS YP_006016174.1 386320011 12611837 complement(2159519..2160523) 1 NC_017568.1 identified by match to protein family HMM PF01032; ferrichrome transport system permease FhuB 2160523 fhuB 12611837 fhuB Staphylococcus pseudintermedius ED99 ferrichrome transport system permease FhuB YP_006016174.1 2159519 R 984892 CDS YP_006016175.1 386320012 12611838 complement(2160549..2161352) 1 NC_017568.1 identified by match to protein family HMM PF00005; ferrichrome transport ATP-binding protein FhuC 2161352 fhuC 12611838 fhuC Staphylococcus pseudintermedius ED99 ferrichrome transport ATP-binding protein FhuC YP_006016175.1 2160549 R 984892 CDS YP_006016176.1 386320013 12611839 complement(2161719..2162552) 1 NC_017568.1 identified by match to protein family HMM PF02588; hypothetical protein 2162552 12611839 SPSE_2099 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016176.1 2161719 R 984892 CDS YP_006016177.1 386320014 12611840 complement(2163026..2164252) 1 NC_017568.1 identified by match to protein family HMM PF01773, match to protein family HMM PF07662; pyrimidine nucleoside transport protein 2164252 12611840 SPSE_2100 Staphylococcus pseudintermedius ED99 pyrimidine nucleoside transport protein YP_006016177.1 2163026 R 984892 CDS YP_006016178.1 386320015 12611841 2164529..2164765 1 NC_017568.1 identified by match to protein family HMM PF04023; FeoA domain-containing protein 2164765 12611841 SPSE_2101 Staphylococcus pseudintermedius ED99 FeoA domain-containing protein YP_006016178.1 2164529 D 984892 CDS YP_006016179.1 386320016 12611842 2164758..2166752 1 NC_017568.1 identified by match to protein family HMM PF01926, match to protein family HMM PF02421, match to protein family HMM PF07664, match to protein family HMM PF07670, match to protein family HMM TIGR00231, match to protein family HMM TIGR00437; ferrous iron transport protein B 2166752 feoB 12611842 feoB Staphylococcus pseudintermedius ED99 ferrous iron transport protein B YP_006016179.1 2164758 D 984892 CDS YP_006016180.1 386320017 12611843 2166765..2166923 1 NC_017568.1 hypothetical protein 2166923 12611843 SPSE_2103 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016180.1 2166765 D 984892 CDS YP_006016181.1 386320018 12611844 complement(2167081..2168835) 1 NC_017568.1 identified by match to protein family HMM PF00005, match to protein family HMM PF00664; multidrug resistance ABC transporter ATP-binding and permease 2168835 12611844 SPSE_2104 Staphylococcus pseudintermedius ED99 multidrug resistance ABC transporter ATP-binding and permease YP_006016181.1 2167081 R 984892 CDS YP_006016182.1 386320019 12611845 2169110..2170387 1 NC_017568.1 identified by match to protein family HMM PF00144, match to protein family HMM PF00768; penicillin binding protein 4 2170387 pbp4 12611845 pbp4 Staphylococcus pseudintermedius ED99 penicillin binding protein 4 YP_006016182.1 2169110 D 984892 CDS YP_006016183.1 386320020 12611846 complement(2170818..2170943) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 2170943 12611846 SPSE_2106 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016183.1 2170818 R 984892 CDS YP_006016184.1 386320021 12611847 complement(2171049..2172251) 1 NC_017568.1 identified by match to protein family HMM PF07690; major facilitator family transporter 2172251 12611847 SPSE_2107 Staphylococcus pseudintermedius ED99 major facilitator family transporter YP_006016184.1 2171049 R 984892 CDS YP_006016185.1 386320022 12611848 complement(2172251..2172445) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 2172445 12611848 SPSE_2108 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016185.1 2172251 R 984892 CDS YP_006016186.1 386320023 12611849 complement(2173590..2173988) 1 NC_017568.1 identified by match to protein family HMM PF01467, match to protein family HMM TIGR00125, match to protein family HMM TIGR01518; glycerol-3-phosphate cytidylyltransferase 2173988 tagD 12611849 tagD Staphylococcus pseudintermedius ED99 glycerol-3-phosphate cytidylyltransferase YP_006016186.1 2173590 R 984892 CDS YP_006016187.1 386320024 12611850 complement(2174082..2175173) 1 NC_017568.1 identified by match to protein family HMM PF04464; teichoic acid biosynthesis protein B 2175173 tagB 12611850 tagB Staphylococcus pseudintermedius ED99 teichoic acid biosynthesis protein B YP_006016187.1 2174082 R 984892 CDS YP_006016188.1 386320025 12611851 complement(2175248..2176051) 1 NC_017568.1 teichoic acid translocation permease TagG 2176051 tagG 12611851 tagG Staphylococcus pseudintermedius ED99 teichoic acid translocation permease TagG YP_006016188.1 2175248 R 984892 CDS YP_006016189.1 386320026 12611852 2176330..2177124 1 NC_017568.1 identified by match to protein family HMM PF00005; teichoic acids export ATP-binding protein TagH 2177124 tagH 12611852 tagH Staphylococcus pseudintermedius ED99 teichoic acids export ATP-binding protein TagH YP_006016189.1 2176330 D 984892 CDS YP_006016190.1 386320027 12611853 complement(2177338..2178159) 1 NC_017568.1 identified by match to protein family HMM PF03808, match to protein family HMM TIGR00696; UDP-N-acetyl-D-mannosamine transferase 2178159 tagA 12611853 tagA Staphylococcus pseudintermedius ED99 UDP-N-acetyl-D-mannosamine transferase YP_006016190.1 2177338 R 984892 CDS YP_006016191.1 386320028 12611854 2178532..2178951 1 NC_017568.1 maltose O-acetyltransferase 2178951 12611854 SPSE_2114 Staphylococcus pseudintermedius ED99 maltose O-acetyltransferase YP_006016191.1 2178532 D 984892 CDS YP_006016192.1 386320029 12611855 2179025..2179768 1 NC_017568.1 hypothetical protein 2179768 12611855 SPSE_2115 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016192.1 2179025 D 984892 CDS YP_006016193.1 386320030 12611856 complement(2180050..2180814) 1 NC_017568.1 identified by match to protein family HMM PF02195; hypothetical protein 2180814 12611856 SPSE_2116 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016193.1 2180050 R 984892 CDS YP_006016194.1 386320031 12611857 complement(2180811..2182013) 1 NC_017568.1 identified by match to protein family HMM PF00278, match to protein family HMM PF02784; pyridoxal-dependent decarboxylase 2182013 12611857 SPSE_2117 Staphylococcus pseudintermedius ED99 pyridoxal-dependent decarboxylase YP_006016194.1 2180811 R 984892 CDS YP_006016195.1 386320032 12611858 complement(2181988..2182782) 1 NC_017568.1 identified by match to protein family HMM PF03328; HpcH/HpaI aldolase/citrate lyase family 2182782 12611858 SPSE_2118 Staphylococcus pseudintermedius ED99 HpcH/HpaI aldolase/citrate lyase family YP_006016195.1 2181988 R 984892 CDS YP_006016196.1 386320033 12611859 complement(2182779..2184533) 1 NC_017568.1 identified by match to protein family HMM PF04183; siderophore biosynthesis protein, IucC family 2184533 12611859 SPSE_2119 Staphylococcus pseudintermedius ED99 siderophore biosynthesis protein, IucC family YP_006016196.1 2182779 R 984892 CDS YP_006016197.1 386320034 12611860 complement(2184517..2186235) 1 NC_017568.1 identified by match to protein family HMM PF04183; siderophore biosynthesis protein, IucA family 2186235 12611860 SPSE_2120 Staphylococcus pseudintermedius ED99 siderophore biosynthesis protein, IucA family YP_006016197.1 2184517 R 984892 CDS YP_006016198.1 386320035 12611861 complement(2186222..2187427) 1 NC_017568.1 identified by match to protein family HMM PF07690; drug transporter 2187427 12611861 SPSE_2121 Staphylococcus pseudintermedius ED99 drug transporter YP_006016198.1 2186222 R 984892 CDS YP_006016199.1 386320036 12611862 complement(2187456..2189231) 1 NC_017568.1 identified by match to protein family HMM PF04183; siderophore biosynthesis protein, IucC family 2189231 12611862 SPSE_2122 Staphylococcus pseudintermedius ED99 siderophore biosynthesis protein, IucC family YP_006016199.1 2187456 R 984892 CDS YP_006016200.1 386320037 12611863 complement(2189243..2190253) 1 NC_017568.1 identified by match to protein family HMM PF02423; ornithine cyclodeaminase 2190253 sbnB 12611863 sbnB Staphylococcus pseudintermedius ED99 ornithine cyclodeaminase YP_006016200.1 2189243 R 984892 CDS YP_006016201.1 386320038 12611864 complement(2190255..2191232) 1 NC_017568.1 identified by match to protein family HMM PF00291; cysteine synthase 2191232 sbnA 12611864 sbnA Staphylococcus pseudintermedius ED99 cysteine synthase YP_006016201.1 2190255 R 984892 CDS YP_006016202.1 386320039 12611865 2191469..2192452 1 NC_017568.1 identified by match to protein family HMM PF01497; iron compound ABC transporter substrate-binding protein 2192452 sirA 12611865 sirA Staphylococcus pseudintermedius ED99 iron compound ABC transporter substrate-binding protein YP_006016202.1 2191469 D 984892 CDS YP_006016203.1 386320040 12611866 2192469..2193464 1 NC_017568.1 identified by match to protein family HMM PF01032; siderophore staphylobactin ABC transporter, permease protein SirB 2193464 sirB 12611866 sirB Staphylococcus pseudintermedius ED99 siderophore staphylobactin ABC transporter, permease protein SirB YP_006016203.1 2192469 D 984892 CDS YP_006016204.1 386320041 12611867 2193461..2194459 1 NC_017568.1 identified by match to protein family HMM PF01032; iron compound ABC transporter, permease protein SirC 2194459 sirC 12611867 sirC Staphylococcus pseudintermedius ED99 iron compound ABC transporter, permease protein SirC YP_006016204.1 2193461 D 984892 CDS YP_006016205.1 386320042 12611868 complement(2194855..2195502) 1 NC_017568.1 identified by match to protein family HMM PF01325, match to protein family HMM PF02742, match to protein family HMM PF04023; iron-dependent repressor 2195502 sirR 12611868 sirR Staphylococcus pseudintermedius ED99 iron-dependent repressor YP_006016205.1 2194855 R 984892 CDS YP_006016206.1 386320043 12611869 2195624..2196400 1 NC_017568.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 2196400 12611869 SPSE_2129 Staphylococcus pseudintermedius ED99 ABC transporter ATP-binding protein YP_006016206.1 2195624 D 984892 CDS YP_006016207.1 386320044 12611870 2196375..2197214 1 NC_017568.1 identified by match to protein family HMM PF00950; manganese transport system membrane protein 2197214 12611870 SPSE_2130 Staphylococcus pseudintermedius ED99 manganese transport system membrane protein YP_006016207.1 2196375 D 984892 CDS YP_006016208.1 386320045 12611871 2197211..2198131 1 NC_017568.1 identified by match to protein family HMM PF01297; manganese ABC transporter substrate-binding lipoprotein 2198131 12611871 SPSE_2131 Staphylococcus pseudintermedius ED99 manganese ABC transporter substrate-binding lipoprotein YP_006016208.1 2197211 D 984892 CDS YP_006016209.1 386320046 12611872 complement(2199100..2199546) 1 NC_017568.1 identified by match to protein family HMM PF03334, match to protein family HMM TIGR01300; monovalent cation/H+ antiporter subunit G 2199546 12611872 SPSE_2132 Staphylococcus pseudintermedius ED99 monovalent cation/H+ antiporter subunit G YP_006016209.1 2199100 R 984892 CDS YP_006016210.1 386320047 12611873 complement(2199530..2199823) 1 NC_017568.1 identified by match to protein family HMM PF04066; monovalent cation/H+ antiporter subunit F 2199823 12611873 SPSE_2133 Staphylococcus pseudintermedius ED99 monovalent cation/H+ antiporter subunit F YP_006016210.1 2199530 R 984892 CDS YP_006016211.1 386320048 12611874 complement(2199820..2200302) 1 NC_017568.1 identified by match to protein family HMM PF01899; monovalent cation/H+ antiporter subunit E 2200302 12611874 SPSE_2134 Staphylococcus pseudintermedius ED99 monovalent cation/H+ antiporter subunit E YP_006016211.1 2199820 R 984892 CDS YP_006016212.1 386320049 12611875 complement(2200303..2201802) 1 NC_017568.1 identified by match to protein family HMM PF00361; monovalent cation/H+ antiporter subunit D 2201802 12611875 SPSE_2135 Staphylococcus pseudintermedius ED99 monovalent cation/H+ antiporter subunit D YP_006016212.1 2200303 R 984892 CDS YP_006016213.1 386320050 12611876 complement(2201795..2202139) 1 NC_017568.1 identified by match to protein family HMM PF00420; monovalent cation/H+ antiporter subunit C 2202139 12611876 SPSE_2136 Staphylococcus pseudintermedius ED99 monovalent cation/H+ antiporter subunit C YP_006016213.1 2201795 R 984892 CDS YP_006016214.1 386320051 12611877 complement(2202136..2202561) 1 NC_017568.1 identified by match to protein family HMM PF04039; monovalent cation/H+ antiporter subunit B 2202561 12611877 SPSE_2137 Staphylococcus pseudintermedius ED99 monovalent cation/H+ antiporter subunit B YP_006016214.1 2202136 R 984892 CDS YP_006016215.1 386320052 12611878 complement(2202548..2204938) 1 NC_017568.1 identified by match to protein family HMM PF00361; monovalent cation/H+ antiporter subunit A 2204938 12611878 SPSE_2138 Staphylococcus pseudintermedius ED99 monovalent cation/H+ antiporter subunit A YP_006016215.1 2202548 R 984892 CDS YP_006016216.1 386320053 12611879 complement(2204960..2205511) 1 NC_017568.1 identified by match to protein family HMM PF00589; phage integrase family protein 2205511 12611879 SPSE_2139 Staphylococcus pseudintermedius ED99 phage integrase family protein YP_006016216.1 2204960 R 984892 CDS YP_006016217.1 386320054 12611880 2205654..2205857 1 NC_017568.1 hypothetical protein 2205857 12611880 SPSE_2140 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016217.1 2205654 D 984892 CDS YP_006016218.1 386320055 12611881 2205873..2206088 1 NC_017568.1 hypothetical protein 2206088 12611881 SPSE_2141 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016218.1 2205873 D 984892 CDS YP_006016219.1 386320056 12611882 complement(2206429..2206671) 1 NC_017568.1 hypothetical protein 2206671 12611882 SPSE_2142 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016219.1 2206429 R 984892 CDS YP_006016220.1 386320057 12611883 2206912..2207841 1 NC_017568.1 identified by match to protein family HMM PF04657; hypothetical protein 2207841 12611883 SPSE_2143 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016220.1 2206912 D 984892 CDS YP_006016221.1 386320058 12611884 2209335..2209706 1 NC_017568.1 identified by match to protein family HMM PF01047, match to protein family HMM TIGR01889; staphylococcal accessory regulator A 2209706 sarA 12611884 sarA Staphylococcus pseudintermedius ED99 staphylococcal accessory regulator A YP_006016221.1 2209335 D 984892 CDS YP_006016222.1 386320059 12611885 complement(2209917..2210633) 1 NC_017568.1 hypothetical protein 2210633 12611885 SPSE_2145 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016222.1 2209917 R 984892 CDS YP_006016223.1 386320060 12611886 complement(2210722..2211225) 1 NC_017568.1 hypothetical protein 2211225 12611886 SPSE_2146 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016223.1 2210722 R 984892 CDS YP_006016224.1 386320061 12611887 complement(2211317..2212117) 1 NC_017568.1 identified by match to protein family HMM PF00561; alpha/beta hydrolase 2212117 12611887 SPSE_2147 Staphylococcus pseudintermedius ED99 alpha/beta hydrolase YP_006016224.1 2211317 R 984892 CDS YP_006016225.1 386320062 12611888 complement(2212117..2212821) 1 NC_017568.1 identified by match to protein family HMM PF00702, match to protein family HMM TIGR01509, match to protein family HMM TIGR01549; haloacid dehalogenase-like family hydrolase 2212821 12611888 SPSE_2148 Staphylococcus pseudintermedius ED99 haloacid dehalogenase-like family hydrolase YP_006016225.1 2212117 R 984892 CDS YP_006016226.1 386320063 12611889 complement(2212878..2213837) 1 NC_017568.1 identified by match to protein family HMM PF00950, match to protein family HMM PF01032; iron compound ABC transporter permease 2213837 12611889 SPSE_2149 Staphylococcus pseudintermedius ED99 iron compound ABC transporter permease YP_006016226.1 2212878 R 984892 CDS YP_006016227.1 386320064 12611890 complement(2213818..2214699) 1 NC_017568.1 identified by match to protein family HMM PF01497; iron compound ABC transporter periplasmic component 2214699 12611890 SPSE_2150 Staphylococcus pseudintermedius ED99 iron compound ABC transporter periplasmic component YP_006016227.1 2213818 R 984892 CDS YP_006016228.1 386320065 12611891 2215273..2215494 1 NC_017568.1 identified by match to protein family HMM PF02416, match to protein family HMM TIGR01411; twin arginine-targeting protein translocase, TatA/E family 2215494 12611891 SPSE_2151 Staphylococcus pseudintermedius ED99 twin arginine-targeting protein translocase, TatA/E family YP_006016228.1 2215273 D 984892 CDS YP_006016229.1 386320066 12611892 2215550..2216194 1 NC_017568.1 identified by match to protein family HMM PF00902; twin-arginine translocation protein, TatC 2216194 tatC 12611892 tatC Staphylococcus pseudintermedius ED99 twin-arginine translocation protein, TatC YP_006016229.1 2215550 D 984892 CDS YP_006016230.1 386320067 12611893 complement(2216237..2217895) 1 NC_017568.1 identified by match to protein family HMM PF00750, match to protein family HMM PF03485, match to protein family HMM PF05746, match to protein family HMM TIGR00456; arginyl-tRNA synthetase 2217895 argS 12611893 argS Staphylococcus pseudintermedius ED99 arginyl-tRNA synthetase YP_006016230.1 2216237 R 984892 CDS YP_006016231.1 386320068 12611894 complement(2217897..2218307) 1 NC_017568.1 identified by match to protein family HMM PF09148; hypothetical protein 2218307 12611894 SPSE_2154 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016231.1 2217897 R 984892 CDS YP_006016232.1 386320069 12611895 complement(2218523..2219038) 1 NC_017568.1 identified by match to protein family HMM PF08741; hypothetical protein 2219038 12611895 SPSE_2155 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016232.1 2218523 R 984892 CDS YP_006016233.1 386320070 12611896 complement(2219116..2220414) 1 NC_017568.1 identified by match to protein family HMM PF01966; HD domain-containing protein 2220414 12611896 SPSE_2156 Staphylococcus pseudintermedius ED99 HD domain-containing protein YP_006016233.1 2219116 R 984892 CDS YP_006016234.1 386320071 12611897 complement(2220437..2220916) 1 NC_017568.1 identified by match to protein family HMM PF00583; GNAT family acetyltransferase 2220916 12611897 SPSE_2157 Staphylococcus pseudintermedius ED99 GNAT family acetyltransferase YP_006016234.1 2220437 R 984892 CDS YP_006016235.1 386320072 12611898 complement(2221326..2221661) 1 NC_017568.1 hypothetical protein 2221661 12611898 SPSE_2158 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016235.1 2221326 R 984892 CDS YP_006016236.1 386320073 12611899 2222283..2222999 1 NC_017568.1 identified by match to protein family HMM PF00089; putative glutamyl-endopeptidase 2222999 12611899 SPSE_2159 Staphylococcus pseudintermedius ED99 putative glutamyl-endopeptidase YP_006016236.1 2222283 D 984892 CDS YP_006016237.1 386320074 12611900 2223166..2223891 1 NC_017568.1 identified by match to protein family HMM PF00089; putative glutamyl-endopeptidase 2223891 12611900 SPSE_2160 Staphylococcus pseudintermedius ED99 putative glutamyl-endopeptidase YP_006016237.1 2223166 D 984892 CDS YP_006016238.1 386320075 12611901 2224224..2224931 1 NC_017568.1 identified by match to protein family HMM PF00089; putative glutamyl-endopeptidase 2224931 12611901 SPSE_2161 Staphylococcus pseudintermedius ED99 putative glutamyl-endopeptidase YP_006016238.1 2224224 D 984892 CDS YP_006016239.1 386320076 12611902 2225289..2226044 1 NC_017568.1 identified by match to protein family HMM PF00089; putative glutamyl-endopeptidase 2226044 12611902 SPSE_2162 Staphylococcus pseudintermedius ED99 putative glutamyl-endopeptidase YP_006016239.1 2225289 D 984892 CDS YP_006016240.1 386320077 12611903 2226408..2227163 1 NC_017568.1 identified by match to protein family HMM PF00089; putative glutamyl-endopeptidase 2227163 12611903 SPSE_2163 Staphylococcus pseudintermedius ED99 putative glutamyl-endopeptidase YP_006016240.1 2226408 D 984892 CDS YP_006016241.1 386320078 12611904 2227371..2228081 1 NC_017568.1 identified by match to protein family HMM PF00089; putative glutamyl-endopeptidase 2228081 12611904 SPSE_2164 Staphylococcus pseudintermedius ED99 putative glutamyl-endopeptidase YP_006016241.1 2227371 D 984892 CDS YP_006016242.1 386320079 12611905 2228301..2229020 1 NC_017568.1 identified by match to protein family HMM PF00089; putative glutamyl-endopeptidase 2229020 12611905 SPSE_2165 Staphylococcus pseudintermedius ED99 putative glutamyl-endopeptidase YP_006016242.1 2228301 D 984892 CDS YP_006016243.1 386320080 12611906 2229226..2229936 1 NC_017568.1 identified by match to protein family HMM PF00089; putative glutamyl-endopeptidase 2229936 12611906 SPSE_2166 Staphylococcus pseudintermedius ED99 putative glutamyl-endopeptidase YP_006016243.1 2229226 D 984892 CDS YP_006016244.1 386320081 12611907 complement(2230080..2230685) 1 NC_017568.1 hypothetical protein 2230685 12611907 SPSE_2167 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016244.1 2230080 R 984892 CDS YP_006016245.1 386320082 12611908 complement(2230669..2231001) 1 NC_017568.1 identified by match to protein family HMM PF03551; PadR family transcriptional regulator 2231001 12611908 SPSE_2168 Staphylococcus pseudintermedius ED99 PadR family transcriptional regulator YP_006016245.1 2230669 R 984892 CDS YP_006016246.1 386320083 12611909 complement(2231154..2232695) 1 NC_017568.1 identified by match to protein family HMM PF00939, match to protein family HMM PF03600, match to protein family HMM TIGR00785; sodium:sulfate symporter 2232695 12611909 SPSE_2169 Staphylococcus pseudintermedius ED99 sodium:sulfate symporter YP_006016246.1 2231154 R 984892 CDS YP_006016247.1 386320084 12611910 complement(2233275..2233736) 1 NC_017568.1 hypothetical protein 2233736 12611910 SPSE_2170 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016247.1 2233275 R 984892 CDS YP_006016248.1 386320085 12611911 complement(2233749..2234504) 1 NC_017568.1 identified by match to protein family HMM PF06738; hypothetical protein 2234504 12611911 SPSE_2171 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016248.1 2233749 R 984892 CDS YP_006016249.1 386320086 12611912 2234886..2235008 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 2235008 12611912 SPSE_2172 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016249.1 2234886 D 984892 CDS YP_006016250.1 386320087 12611913 2235005..2235343 1 NC_017568.1 identified by match to protein family HMM PF02452; hypothetical protein 2235343 12611913 SPSE_2173 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016250.1 2235005 D 984892 CDS YP_006016251.1 386320088 12611914 complement(2235551..2236306) 1 NC_017568.1 identified by match to protein family HMM PF06778; chlorite dismutase 2236306 12611914 SPSE_2174 Staphylococcus pseudintermedius ED99 chlorite dismutase YP_006016251.1 2235551 R 984892 CDS YP_006016252.1 386320089 12611915 2236474..2237463 1 NC_017568.1 identified by match to protein family HMM PF01515, match to protein family HMM TIGR00651; phosphate acetyltransferase 2237463 pta 12611915 pta Staphylococcus pseudintermedius ED99 phosphate acetyltransferase YP_006016252.1 2236474 D 984892 CDS YP_006016253.1 386320090 12611916 2237463..2238299 1 NC_017568.1 lipoate-protein ligase A family protein 2238299 12611916 SPSE_2176 Staphylococcus pseudintermedius ED99 lipoate-protein ligase A family protein YP_006016253.1 2237463 D 984892 CDS YP_006016254.1 386320091 12611917 complement(2238453..2238800) 1 NC_017568.1 hypothetical protein 2238800 12611917 SPSE_2177 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016254.1 2238453 R 984892 CDS YP_006016255.1 386320092 12611918 2238999..2239244 1 NC_017568.1 hypothetical protein 2239244 12611918 SPSE_2178 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016255.1 2238999 D 984892 CDS YP_006016256.1 386320093 12611919 2239247..2239996 1 NC_017568.1 hypothetical protein 2239996 12611919 SPSE_2179 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016256.1 2239247 D 984892 CDS YP_006016257.1 386320094 12611920 2239999..2240472 1 NC_017568.1 hypothetical protein 2240472 12611920 SPSE_2180 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016257.1 2239999 D 984892 CDS YP_006016258.1 386320095 12611921 complement(2240772..2241176) 1 NC_017568.1 identified by match to protein family HMM PF01451, match to protein family HMM TIGR02691; arsenate reductase 2241176 arsC 12611921 arsC Staphylococcus pseudintermedius ED99 arsenate reductase YP_006016258.1 2240772 R 984892 CDS YP_006016259.1 386320096 12611922 complement(2241192..2242481) 1 NC_017568.1 identified by match to protein family HMM PF02040, match to protein family HMM PF03600, match to protein family HMM PF03806, match to protein family HMM TIGR00935; arsenical pump membrane protein 2242481 arsB 12611922 arsB Staphylococcus pseudintermedius ED99 arsenical pump membrane protein YP_006016259.1 2241192 R 984892 CDS YP_006016260.1 386320097 12611923 complement(2242478..2242798) 1 NC_017568.1 identified by match to protein family HMM PF01022; arsenical resistance operon repressor 2242798 arsR 12611923 arsR Staphylococcus pseudintermedius ED99 arsenical resistance operon repressor YP_006016260.1 2242478 R 984892 CDS YP_006016261.1 386320098 12611924 complement(2243726..2245579) 1 NC_017568.1 identified by match to protein family HMM PF07690, match to protein family HMM TIGR00711; drug resistance transporter, EmrB/QacA family 2245579 12611924 SPSE_2184 Staphylococcus pseudintermedius ED99 drug resistance transporter, EmrB/QacA family YP_006016261.1 2243726 R 984892 CDS YP_006016262.1 386320099 12611925 complement(2245596..2246243) 1 NC_017568.1 identified by match to protein family HMM PF00364; multidrug resistance protein A 2246243 12611925 SPSE_2185 Staphylococcus pseudintermedius ED99 multidrug resistance protein A YP_006016262.1 2245596 R 984892 CDS YP_006016263.1 386320100 12611926 2246370..2246933 1 NC_017568.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 2246933 12611926 SPSE_2186 Staphylococcus pseudintermedius ED99 TetR family transcriptional regulator YP_006016263.1 2246370 D 984892 CDS YP_006016264.1 386320101 12611928 complement(2248439..2249002) 1 NC_017568.1 identified by match to protein family HMM PF00583; acetyltransferase 2249002 12611928 SPSE_2189 Staphylococcus pseudintermedius ED99 acetyltransferase YP_006016264.1 2248439 R 984892 CDS YP_006016265.1 386320102 12611929 2249234..2250685 1 NC_017568.1 identified by match to protein family HMM PF00324; amino acid permease 2250685 12611929 SPSE_2190 Staphylococcus pseudintermedius ED99 amino acid permease YP_006016265.1 2249234 D 984892 CDS YP_006016266.1 386320103 12611930 complement(2251419..2251781) 1 NC_017568.1 identified by match to protein family HMM PF04241; membrane protein 2251781 12611930 SPSE_2191 Staphylococcus pseudintermedius ED99 membrane protein YP_006016266.1 2251419 R 984892 CDS YP_006016267.1 386320104 12611931 complement(2251809..2252132) 1 NC_017568.1 hypothetical protein 2252132 12611931 SPSE_2192 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016267.1 2251809 R 984892 CDS YP_006016268.1 386320105 12611932 complement(2252125..2252793) 1 NC_017568.1 identified by match to protein family HMM PF03167, match to protein family HMM TIGR00628; uracil-DNA glycosylase 2252793 ung 12611932 ung Staphylococcus pseudintermedius ED99 uracil-DNA glycosylase YP_006016268.1 2252125 R 984892 CDS YP_006016269.1 386320106 12611933 2252983..2253813 1 NC_017568.1 identified by match to protein family HMM PF08543, match to protein family HMM TIGR00097; phosphomethylpyrimidine kinase 2253813 12611933 SPSE_2194 Staphylococcus pseudintermedius ED99 phosphomethylpyrimidine kinase YP_006016269.1 2252983 D 984892 CDS YP_006016270.1 386320107 12611934 complement(2253958..2254215) 1 NC_017568.1 hypothetical protein 2254215 12611934 SPSE_2195 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016270.1 2253958 R 984892 CDS YP_006016271.1 386320108 12611935 complement(2254215..2254586) 1 NC_017568.1 hypothetical protein 2254586 12611935 SPSE_2196 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016271.1 2254215 R 984892 CDS YP_006016272.1 386320109 12611936 complement(2254555..2255700) 1 NC_017568.1 identified by match to protein family HMM PF00108, match to protein family HMM PF02803, match to protein family HMM TIGR01930; acetyl-CoA C-acetyltransferase 2255700 vraB 12611936 vraB Staphylococcus pseudintermedius ED99 acetyl-CoA C-acetyltransferase YP_006016272.1 2254555 R 984892 CDS YP_006016273.1 386320110 12611937 complement(2255697..2257046) 1 NC_017568.1 identified by match to protein family HMM PF00501; long chain fatty acid-CoA ligase 2257046 vraA 12611937 vraA Staphylococcus pseudintermedius ED99 long chain fatty acid-CoA ligase YP_006016273.1 2255697 R 984892 CDS YP_006016274.1 386320111 12611938 complement(2257257..2257943) 1 NC_017568.1 identified by match to protein family HMM PF00300, match to protein family HMM TIGR01258; phosphoglycerate mutase 2257943 12611938 SPSE_2199 Staphylococcus pseudintermedius ED99 phosphoglycerate mutase YP_006016274.1 2257257 R 984892 CDS YP_006016275.1 386320112 12611939 complement(2258561..2259013) 1 NC_017568.1 ABC transporter ATP-binding protein, truncated 2259013 12611939 SPSE_2200 Staphylococcus pseudintermedius ED99 ABC transporter ATP-binding protein, truncated YP_006016275.1 2258561 R 984892 CDS YP_006016276.1 386320113 12611940 complement(2260197..2261540) 1 NC_017568.1 identified by match to protein family HMM PF00078, match to protein family HMM PF08388; RNA-directed DNA polymerase 2261540 12611940 SPSE_2201 Staphylococcus pseudintermedius ED99 RNA-directed DNA polymerase YP_006016276.1 2260197 R 984892 CDS YP_006016277.1 386320114 12611941 complement(2262117..2262839) 1 NC_017568.1 membrane protein 2262839 12611941 SPSE_2202 Staphylococcus pseudintermedius ED99 membrane protein YP_006016277.1 2262117 R 984892 CDS YP_006016278.1 386320115 12611942 complement(2262854..2263489) 1 NC_017568.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 2263489 12611942 SPSE_2203 Staphylococcus pseudintermedius ED99 ABC transporter ATP-binding protein YP_006016278.1 2262854 R 984892 CDS YP_006016279.1 386320116 12611943 complement(2263502..2264269) 1 NC_017568.1 hypothetical protein 2264269 12611943 SPSE_2204 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016279.1 2263502 R 984892 CDS YP_006016280.1 386320117 12611944 complement(2264250..2265212) 1 NC_017568.1 identified by match to protein family HMM PF04055; radical SAM domain-containing protein 2265212 12611944 SPSE_2205 Staphylococcus pseudintermedius ED99 radical SAM domain-containing protein YP_006016280.1 2264250 R 984892 CDS YP_006016281.1 386320118 12611945 complement(2265268..2265432) 1 NC_017568.1 hypothetical protein 2265432 12611945 SPSE_2206 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016281.1 2265268 R 984892 CDS YP_006016282.1 386320119 12611946 2266040..2266210 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 2266210 12611946 SPSE_2207 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016282.1 2266040 D 984892 CDS YP_006016283.1 386320120 12611948 complement(2267637..2268494) 1 NC_017568.1 identified by match to protein family HMM PF01210, match to protein family HMM PF02558, match to protein family HMM PF08546, match to protein family HMM TIGR00745; 2-dehydropantoate 2-reductase 2268494 12611948 SPSE_2210 Staphylococcus pseudintermedius ED99 2-dehydropantoate 2-reductase YP_006016283.1 2267637 R 984892 CDS YP_006016284.1 386320121 12611949 complement(2268986..2269669) 1 NC_017568.1 hypothetical protein 2269669 12611949 SPSE_2211 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016284.1 2268986 R 984892 CDS YP_006016285.1 386320122 12611950 complement(2270234..2270782) 1 NC_017568.1 identified by match to protein family HMM PF01380, match to protein family HMM TIGR03127; 6-phospho 3-hexuloisomerase 2270782 hxlB 12611950 hxlB Staphylococcus pseudintermedius ED99 6-phospho 3-hexuloisomerase YP_006016285.1 2270234 R 984892 CDS YP_006016286.1 386320123 12611951 complement(2270784..2271422) 1 NC_017568.1 identified by match to protein family HMM PF00215, match to protein family HMM TIGR03128; 3-hexulose-6-phosphate synthase 2271422 hxlA 12611951 hxlA Staphylococcus pseudintermedius ED99 3-hexulose-6-phosphate synthase YP_006016286.1 2270784 R 984892 CDS YP_006016287.1 386320124 12611952 complement(2271521..2272255) 1 NC_017568.1 identified by match to protein family HMM PF01182, match to protein family HMM TIGR00502; glucosamine-6-phosphate isomerase 2272255 nagB 12611952 nagB Staphylococcus pseudintermedius ED99 glucosamine-6-phosphate isomerase YP_006016287.1 2271521 R 984892 CDS YP_006016288.1 386320125 12611953 complement(2272261..2272935) 1 NC_017568.1 identified by match to protein family HMM PF04131; N-acetylmannosamine-6-phosphate 2-epimerase 2272935 12611953 SPSE_2215 Staphylococcus pseudintermedius ED99 N-acetylmannosamine-6-phosphate 2-epimerase YP_006016288.1 2272261 R 984892 CDS YP_006016289.1 386320126 12611954 complement(2272936..2274474) 1 NC_017568.1 identified by match to protein family HMM PF00367, match to protein family HMM PF02378, match to protein family HMM TIGR00826; PTS system glucose-specific EIICB component 2274474 12611954 SPSE_2216 Staphylococcus pseudintermedius ED99 PTS system glucose-specific EIICB component YP_006016289.1 2272936 R 984892 CDS YP_006016290.1 386320127 12611955 2274594..2275433 1 NC_017568.1 identified by match to protein family HMM PF01380, match to protein family HMM PF01418; transcriptional regulator 2275433 12611955 SPSE_2217 Staphylococcus pseudintermedius ED99 transcriptional regulator YP_006016290.1 2274594 D 984892 CDS YP_006016291.1 386320128 12611956 2275519..2275878 1 NC_017568.1 identified by match to protein family HMM PF08830; hypothetical protein 2275878 12611956 SPSE_2218 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016291.1 2275519 D 984892 CDS YP_006016292.1 386320129 12611957 2275891..2276574 1 NC_017568.1 identified by match to protein family HMM PF02585; hypothetical protein 2276574 12611957 SPSE_2219 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016292.1 2275891 D 984892 CDS YP_006016293.1 386320130 12611958 2276620..2277498 1 NC_017568.1 identified by match to protein family HMM PF02649, match to protein family HMM TIGR00294; hypothetical protein 2277498 12611958 SPSE_2220 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016293.1 2276620 D 984892 CDS YP_006016294.1 386320131 12611959 complement(2277656..2278318) 1 NC_017568.1 identified by match to protein family HMM PF00005; amino acid ABC transporter, ATP-binding protein 2278318 12611959 SPSE_2221 Staphylococcus pseudintermedius ED99 amino acid ABC transporter, ATP-binding protein YP_006016294.1 2277656 R 984892 CDS YP_006016295.1 386320132 12611960 complement(2278318..2280513) 1 NC_017568.1 hypothetical protein 2280513 12611960 SPSE_2222 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016295.1 2278318 R 984892 CDS YP_006016296.1 386320133 12611961 complement(2280970..2281836) 1 NC_017568.1 identified by match to protein family HMM PF00702, match to protein family HMM PF05116, match to protein family HMM PF08282, match to protein family HMM TIGR00099, match to protein family HMM TIGR01484; cof family hydrolase 2281836 12611961 SPSE_2223 Staphylococcus pseudintermedius ED99 cof family hydrolase YP_006016296.1 2280970 R 984892 CDS YP_006016297.1 386320134 12611962 complement(2281998..2282471) 1 NC_017568.1 identified by match to protein family HMM PF00383; tRNA-specific adenosine deaminase 2282471 tadA 12611962 tadA Staphylococcus pseudintermedius ED99 tRNA-specific adenosine deaminase YP_006016297.1 2281998 R 984892 CDS YP_006016298.1 386320135 12611963 2282541..2283164 1 NC_017568.1 identified by match to protein family HMM PF01712; deoxynucleoside kinase 2283164 12611963 SPSE_2225 Staphylococcus pseudintermedius ED99 deoxynucleoside kinase YP_006016298.1 2282541 D 984892 CDS YP_006016299.1 386320136 12611964 2283151..2283816 1 NC_017568.1 identified by match to protein family HMM PF01712; deoxyadenosIne kinase 2283816 dak 12611964 dak Staphylococcus pseudintermedius ED99 deoxyadenosIne kinase YP_006016299.1 2283151 D 984892 CDS YP_006016300.1 386320137 12611965 complement(2284369..2285067) 1 NC_017568.1 identified by match to protein family HMM PF00702, match to protein family HMM TIGR01549; haloacid dehalogenase-like family hydrolase 2285067 12611965 SPSE_2227 Staphylococcus pseudintermedius ED99 haloacid dehalogenase-like family hydrolase YP_006016300.1 2284369 R 984892 CDS YP_006016301.1 386320138 12611966 2285305..2286297 1 NC_017568.1 identified by match to protein family HMM PF03372, match to protein family HMM TIGR03395; beta-hemolysin 2286297 hlb 12611966 hlb Staphylococcus pseudintermedius ED99 beta-hemolysin YP_006016301.1 2285305 D 984892 CDS YP_006016302.1 386320139 12611967 complement(2287007..2288089) 1 NC_017568.1 identified by match to protein family HMM PF01063, match to protein family HMM TIGR01123; branched-chain amino acid aminotransferase 2288089 ilvE 12611967 ilvE Staphylococcus pseudintermedius ED99 branched-chain amino acid aminotransferase YP_006016302.1 2287007 R 984892 CDS YP_006016303.1 386320140 12611969 2289114..2290370 1 NC_017568.1 identified by match to protein family HMM PF07690; major facilitator family transporter 2290370 12611969 SPSE_2232 Staphylococcus pseudintermedius ED99 major facilitator family transporter YP_006016303.1 2289114 D 984892 CDS YP_006016304.1 386320141 12611970 complement(2291194..2292153) 1 NC_017568.1 identified by match to protein family HMM PF01370, match to protein family HMM PF02719; NAD dependent epimerase/dehydratase family protein 2292153 12611970 SPSE_2233 Staphylococcus pseudintermedius ED99 NAD dependent epimerase/dehydratase family protein YP_006016304.1 2291194 R 984892 CDS YP_006016305.1 386320142 12611971 complement(2292361..2293569) 1 NC_017568.1 identified by match to protein family HMM PF00155, match to protein family HMM PF00202, match to protein family HMM PF01053, match to protein family HMM TIGR01825; 2-amino-3-ketobutyrate coenzyme A ligase 2293569 kbl 12611971 kbl Staphylococcus pseudintermedius ED99 2-amino-3-ketobutyrate coenzyme A ligase YP_006016305.1 2292361 R 984892 CDS YP_006016306.1 386320143 12611972 2293661..2294848 1 NC_017568.1 identified by match to protein family HMM PF01546, match to protein family HMM PF07687, match to protein family HMM TIGR01891; N-acyl-L-amino acid amidohydrolase 2294848 12611972 SPSE_2235 Staphylococcus pseudintermedius ED99 N-acyl-L-amino acid amidohydrolase YP_006016306.1 2293661 D 984892 CDS YP_006016307.1 386320144 12611973 2295434..2296138 1 NC_017568.1 identified by match to protein family HMM PF03306, match to protein family HMM TIGR01252; alpha-acetolactate decarboxylase 2296138 budA 12611973 budA Staphylococcus pseudintermedius ED99 alpha-acetolactate decarboxylase YP_006016307.1 2295434 D 984892 CDS YP_006016308.1 386320145 12611974 complement(2296251..2297438) 1 NC_017568.1 identified by match to protein family HMM PF00009, match to protein family HMM PF03143, match to protein family HMM PF03144, match to protein family HMM TIGR00231, match to protein family HMM TIGR00485; translation elongation factor Tu 2297438 tuf 12611974 tuf Staphylococcus pseudintermedius ED99 translation elongation factor Tu YP_006016308.1 2296251 R 984892 CDS YP_006016309.1 386320146 12611975 complement(2297620..2299701) 1 NC_017568.1 identified by match to protein family HMM PF00009, match to protein family HMM PF00679, match to protein family HMM PF03144, match to protein family HMM PF03764, match to protein family HMM TIGR00231, match to protein family HMM TIGR00484; translation elongation factor G 2299701 fusA 12611975 fusA Staphylococcus pseudintermedius ED99 translation elongation factor G YP_006016309.1 2297620 R 984892 CDS YP_006016310.1 386320147 12611976 complement(2299844..2300314) 1 NC_017568.1 identified by match to protein family HMM PF00177, match to protein family HMM TIGR01029; 30S ribosomal protein S7 2300314 rpsG 12611976 rpsG Staphylococcus pseudintermedius ED99 30S ribosomal protein S7 YP_006016310.1 2299844 R 984892 CDS YP_006016311.1 386320148 12611977 complement(2300395..2300808) 1 NC_017568.1 identified by match to protein family HMM PF00164, match to protein family HMM TIGR00981; 30S ribosomal protein S12 2300808 rpsL 12611977 rpsL Staphylococcus pseudintermedius ED99 30S ribosomal protein S12 YP_006016311.1 2300395 R 984892 CDS YP_006016312.1 386320149 12611978 complement(2300904..2301158) 1 NC_017568.1 ribosomal protein L7Ae 2301158 12611978 SPSE_2241 Staphylococcus pseudintermedius ED99 ribosomal protein L7Ae YP_006016312.1 2300904 R 984892 CDS YP_006016313.1 386320150 12611979 complement(2301336..2304956) 1 NC_017568.1 identified by match to protein family HMM PF00623, match to protein family HMM PF04983, match to protein family HMM PF04997, match to protein family HMM PF04998, match to protein family HMM PF05000, match to protein family HMM TIGR02386; DNA-directed RNA polymerase subunit beta' 2304956 rpoC 12611979 rpoC Staphylococcus pseudintermedius ED99 DNA-directed RNA polymerase subunit beta' YP_006016313.1 2301336 R 984892 CDS YP_006016314.1 386320151 12611980 complement(2305191..2308745) 1 NC_017568.1 identified by match to protein family HMM PF00562, match to protein family HMM PF04560, match to protein family HMM PF04561, match to protein family HMM PF04563, match to protein family HMM PF04565, match to protein family HMM TIGR02013; DNA-directed RNA polymerase subunit beta 2308745 rpoB 12611980 rpoB Staphylococcus pseudintermedius ED99 DNA-directed RNA polymerase subunit beta YP_006016314.1 2305191 R 984892 CDS YP_006016315.1 386320152 12611981 complement(2308958..2309566) 1 NC_017568.1 identified by match to protein family HMM PF05175; hypothetical protein 2309566 12611981 SPSE_2244 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016315.1 2308958 R 984892 CDS YP_006016316.1 386320153 12611982 complement(2309644..2310009) 1 NC_017568.1 identified by match to protein family HMM PF00542, match to protein family HMM TIGR00855; 50S ribosomal protein L7/L12 2310009 rplL 12611982 rplL Staphylococcus pseudintermedius ED99 50S ribosomal protein L7/L12 YP_006016316.1 2309644 R 984892 CDS YP_006016317.1 386320154 12611983 complement(2310050..2310550) 1 NC_017568.1 identified by match to protein family HMM PF00466; 50S ribosomal protein L10 2310550 rplJ 12611983 rplJ Staphylococcus pseudintermedius ED99 50S ribosomal protein L10 YP_006016317.1 2310050 R 984892 CDS YP_006016318.1 386320155 12611984 complement(2310838..2311533) 1 NC_017568.1 identified by match to protein family HMM PF00687, match to protein family HMM TIGR01169; 50S ribosomal protein L1 2311533 rplA 12611984 rplA Staphylococcus pseudintermedius ED99 50S ribosomal protein L1 YP_006016318.1 2310838 R 984892 CDS YP_006016319.1 386320156 12611985 complement(2311725..2312147) 1 NC_017568.1 identified by match to protein family HMM PF00298, match to protein family HMM PF03946, match to protein family HMM TIGR01632; 50S ribosomal protein L11 2312147 rplK 12611985 rplK Staphylococcus pseudintermedius ED99 50S ribosomal protein L11 YP_006016319.1 2311725 R 984892 CDS YP_006016320.1 386320157 12611986 complement(2312312..2312860) 1 NC_017568.1 identified by match to protein family HMM PF00467, match to protein family HMM PF02357, match to protein family HMM TIGR00922; transcription termination/antitermination factor NusG 2312860 nusG 12611986 nusG Staphylococcus pseudintermedius ED99 transcription termination/antitermination factor NusG YP_006016320.1 2312312 R 984892 CDS YP_006016321.1 386320158 12611987 complement(2312879..2313058) 1 NC_017568.1 identified by match to protein family HMM PF00584, match to protein family HMM TIGR00964; Preprotein translocase subunit SecE 2313058 secE 12611987 secE Staphylococcus pseudintermedius ED99 Preprotein translocase subunit SecE YP_006016321.1 2312879 R 984892 CDS YP_006016322.1 386320159 12611988 complement(2313076..2313222) 1 NC_017568.1 hypothetical protein 2313222 12611988 SPSE_2252 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016322.1 2313076 R 984892 CDS YP_006016323.1 386320160 12611989 complement(2313291..2313863) 1 NC_017568.1 identified by match to protein family HMM PF04542, match to protein family HMM PF08281, match to protein family HMM TIGR02937; sigma factor SigH 2313863 sigH 12611989 sigH Staphylococcus pseudintermedius ED99 sigma factor SigH YP_006016323.1 2313291 R 984892 CDS YP_006016324.1 386320161 12611990 complement(2313940..2314467) 1 NC_017568.1 identified by match to protein family HMM PF05991; hypothetical protein 2314467 12611990 SPSE_2254 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016324.1 2313940 R 984892 CDS YP_006016325.1 386320162 12611991 complement(2314468..2315217) 1 NC_017568.1 identified by match to protein family HMM PF00588, match to protein family HMM PF08032, match to protein family HMM TIGR00186; TrmH family RNA methyltransferase 2315217 12611991 SPSE_2255 Staphylococcus pseudintermedius ED99 TrmH family RNA methyltransferase YP_006016325.1 2314468 R 984892 CDS YP_006016326.1 386320163 12611992 complement(2315223..2315624) 1 NC_017568.1 identified by match to protein family HMM PF00636; hypothetical protein 2315624 12611992 SPSE_2256 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016326.1 2315223 R 984892 CDS YP_006016327.1 386320164 12611993 complement(2315617..2317017) 1 NC_017568.1 identified by match to protein family HMM PF01406, match to protein family HMM PF09190, match to protein family HMM PF09334, match to protein family HMM TIGR00435; cysteinyl-tRNA synthetase 2317017 cysS 12611993 cysS Staphylococcus pseudintermedius ED99 cysteinyl-tRNA synthetase YP_006016327.1 2315617 R 984892 CDS YP_006016328.1 386320165 12611994 complement(2317001..2317642) 1 NC_017568.1 identified by match to protein family HMM PF00132, match to protein family HMM TIGR01172; serine O-acetyltransferase 2317642 cysE 12611994 cysE Staphylococcus pseudintermedius ED99 serine O-acetyltransferase YP_006016328.1 2317001 R 984892 CDS YP_006016329.1 386320166 12611995 complement(2318054..2319508) 1 NC_017568.1 identified by match to protein family HMM PF00749, match to protein family HMM TIGR00464; glutamyl-tRNA synthetase 2319508 gltX 12611995 gltX Staphylococcus pseudintermedius ED99 glutamyl-tRNA synthetase YP_006016329.1 2318054 R 984892 CDS YP_006016330.1 386320167 12611996 complement(2319585..2320064) 1 NC_017568.1 identified by match to protein family HMM PF02542, match to protein family HMM TIGR00151; 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase 2320064 ispF 12611996 ispF Staphylococcus pseudintermedius ED99 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase YP_006016330.1 2319585 R 984892 CDS YP_006016331.1 386320168 12611997 complement(2320057..2320755) 1 NC_017568.1 identified by match to protein family HMM PF01128, match to protein family HMM TIGR00453; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2320755 ispD 12611997 ispD Staphylococcus pseudintermedius ED99 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_006016331.1 2320057 R 984892 CDS YP_006016332.1 386320169 12611998 complement(2320756..2321817) 1 NC_017568.1 identified by match to protein family HMM PF01850; PIN domain-containing protein 2321817 12611998 SPSE_2262 Staphylococcus pseudintermedius ED99 PIN domain-containing protein YP_006016332.1 2320756 R 984892 CDS YP_006016333.1 386320170 12611999 complement(2321836..2323206) 1 NC_017568.1 identified by match to protein family HMM TIGR00416; DNA repair protein RadA 2323206 radA 12611999 radA Staphylococcus pseudintermedius ED99 DNA repair protein RadA YP_006016333.1 2321836 R 984892 CDS YP_006016334.1 386320171 12612000 complement(2323593..2324339) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 2324339 12612000 SPSE_2264 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016334.1 2323593 R 984892 CDS YP_006016335.1 386320172 12612001 complement(2324326..2325030) 1 NC_017568.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 2325030 12612001 SPSE_2265 Staphylococcus pseudintermedius ED99 ABC transporter ATP-binding protein YP_006016335.1 2324326 R 984892 CDS YP_006016336.1 386320173 12612002 complement(2325045..2326007) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 2326007 12612002 SPSE_2266 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016336.1 2325045 R 984892 CDS YP_006016337.1 386320174 12612003 complement(2326004..2326816) 1 NC_017568.1 identified by match to protein family HMM TIGR03605; nitroreductase 2326816 12612003 SPSE_2267 Staphylococcus pseudintermedius ED99 nitroreductase YP_006016337.1 2326004 R 984892 CDS YP_006016338.1 386320175 12612004 complement(2326836..2328056) 1 NC_017568.1 identified by match to protein family HMM PF02624; hypothetical protein 2328056 12612004 SPSE_2268 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016338.1 2326836 R 984892 CDS YP_006016339.1 386320176 12612005 complement(2328053..2328904) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 2328904 12612005 SPSE_2269 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016339.1 2328053 R 984892 CDS YP_006016340.1 386320177 12612006 complement(2329585..2332044) 1 NC_017568.1 identified by match to protein family HMM PF00004, match to protein family HMM PF02151, match to protein family HMM PF02861, match to protein family HMM PF07724, match to protein family HMM PF07728; ATP-dependent Clp protease ATP-binding subunit ClpC 2332044 clpC 12612006 clpC Staphylococcus pseudintermedius ED99 ATP-dependent Clp protease ATP-binding subunit ClpC YP_006016340.1 2329585 R 984892 CDS YP_006016341.1 386320178 12612007 complement(2332060..2333061) 1 NC_017568.1 identified by match to protein family HMM PF00217; ATP:guanido phosphotransferase 2333061 12612007 SPSE_2271 Staphylococcus pseudintermedius ED99 ATP:guanido phosphotransferase YP_006016341.1 2332060 R 984892 CDS YP_006016342.1 386320179 12612008 complement(2333054..2333584) 1 NC_017568.1 identified by match to protein family HMM PF02151; UvrB/UvrC motif domain protein 2333584 12612008 SPSE_2272 Staphylococcus pseudintermedius ED99 UvrB/UvrC motif domain protein YP_006016342.1 2333054 R 984892 CDS YP_006016343.1 386320180 12612009 complement(2333598..2334059) 1 NC_017568.1 identified by match to protein family HMM PF05848; CtsR family transcriptional regulator 2334059 ctsR 12612009 ctsR Staphylococcus pseudintermedius ED99 CtsR family transcriptional regulator YP_006016343.1 2333598 R 984892 CDS YP_006016344.1 386320181 12612010 2334224..2335429 1 NC_017568.1 identified by match to protein family HMM PF01773, match to protein family HMM PF07662, match to protein family HMM PF07670; pyrimidine nucleoside transport protein 2335429 nupC 12612010 nupC Staphylococcus pseudintermedius ED99 pyrimidine nucleoside transport protein YP_006016344.1 2334224 D 984892 CDS YP_006016345.1 386320182 12612011 2335489..2335602 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 2335602 12612011 SPSE_2275 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016345.1 2335489 D 984892 CDS YP_006016346.1 386320183 12612012 2335912..2336670 1 NC_017568.1 identified by match to protein family HMM PF00089; putative glutamyl-endopeptidase 2336670 12612012 SPSE_2276 Staphylococcus pseudintermedius ED99 putative glutamyl-endopeptidase YP_006016346.1 2335912 D 984892 CDS YP_006016347.1 386320184 12612013 complement(2336813..2337370) 1 NC_017568.1 identified by match to protein family HMM PF01174, match to protein family HMM PF07685; glutamine amidotransferase subunit PdxT 2337370 pdxT 12612013 pdxT Staphylococcus pseudintermedius ED99 glutamine amidotransferase subunit PdxT YP_006016347.1 2336813 R 984892 CDS YP_006016348.1 386320185 12612014 complement(2337372..2338259) 1 NC_017568.1 identified by match to protein family HMM PF01680, match to protein family HMM PF05690, match to protein family HMM TIGR00343; pyridoxine biosynthesis protein 2338259 pdxS 12612014 pdxS Staphylococcus pseudintermedius ED99 pyridoxine biosynthesis protein YP_006016348.1 2337372 R 984892 CDS YP_006016349.1 386320186 12612015 2338369..2339778 1 NC_017568.1 identified by match to protein family HMM PF00155, match to protein family HMM PF00392; GntR family transcriptional regulator 2339778 12612015 SPSE_2279 Staphylococcus pseudintermedius ED99 GntR family transcriptional regulator YP_006016349.1 2338369 D 984892 CDS YP_006016350.1 386320187 12612016 complement(2339833..2341761) 1 NC_017568.1 identified by match to protein family HMM PF05976; hypothetical protein 2341761 12612016 SPSE_2280 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016350.1 2339833 R 984892 CDS YP_006016351.1 386320188 12612029 complement(2348267..2349754) 1 NC_017568.1 identified by match to protein family HMM PF00152, match to protein family HMM PF01336, match to protein family HMM TIGR00499; lysyl-tRNA synthetase 2349754 lysS 12612029 lysS Staphylococcus pseudintermedius ED99 lysyl-tRNA synthetase YP_006016351.1 2348267 R 984892 CDS YP_006016352.1 386320189 12612030 complement(2349777..2350769) 1 NC_017568.1 identified by match to protein family HMM PF00724, match to protein family HMM PF01207, match to protein family HMM TIGR00737; dihydrouridine synthase TIM-barrel protein 2350769 12612030 SPSE_2294 Staphylococcus pseudintermedius ED99 dihydrouridine synthase TIM-barrel protein YP_006016352.1 2349777 R 984892 CDS YP_006016353.1 386320190 12612031 complement(2350814..2351299) 1 NC_017568.1 identified by match to protein family HMM PF01288, match to protein family HMM TIGR01498; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 2351299 folK 12612031 folK Staphylococcus pseudintermedius ED99 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_006016353.1 2350814 R 984892 CDS YP_006016354.1 386320191 12612032 complement(2351292..2351663) 1 NC_017568.1 identified by match to protein family HMM PF02152, match to protein family HMM TIGR00525, match to protein family HMM TIGR00526; dihydroneopterin aldolase 2351663 folB 12612032 folB Staphylococcus pseudintermedius ED99 dihydroneopterin aldolase YP_006016354.1 2351292 R 984892 CDS YP_006016355.1 386320192 12612034 complement(2351653..2352456) 1 NC_017568.1 identified by match to protein family HMM PF00809, match to protein family HMM TIGR01496; dihydropteroate synthase 2352456 folP 12612034 folP Staphylococcus pseudintermedius ED99 dihydropteroate synthase YP_006016355.1 2351653 R 984892 CDS YP_006016356.1 386320193 12612036 complement(2352678..2353607) 1 NC_017568.1 identified by match to protein family HMM PF00291, match to protein family HMM TIGR01136, match to protein family HMM TIGR01139; cysteine synthase 2353607 cysK 12612036 cysK Staphylococcus pseudintermedius ED99 cysteine synthase YP_006016356.1 2352678 R 984892 CDS YP_006016357.1 386320194 12612038 complement(2354131..2355015) 1 NC_017568.1 identified by match to protein family HMM PF01430; chaperonin HslO 2355015 hslO 12612038 hslO Staphylococcus pseudintermedius ED99 chaperonin HslO YP_006016357.1 2354131 R 984892 CDS YP_006016358.1 386320195 12612040 complement(2355470..2357584) 1 NC_017568.1 identified by match to protein family HMM PF00004, match to protein family HMM PF01434, match to protein family HMM PF06480, match to protein family HMM PF07728, match to protein family HMM TIGR01241; cell division protein FtsH 2357584 12612040 SPSE_2300 Staphylococcus pseudintermedius ED99 cell division protein FtsH YP_006016358.1 2355470 R 984892 CDS YP_006016359.1 386320196 12612042 complement(2357700..2358239) 1 NC_017568.1 identified by match to protein family HMM PF00156, match to protein family HMM TIGR01203; hypoxanthine phosphoribosyltransferase 2358239 hpt 12612042 hpt Staphylococcus pseudintermedius ED99 hypoxanthine phosphoribosyltransferase YP_006016359.1 2357700 R 984892 CDS YP_006016360.1 386320197 12612043 complement(2358229..2359518) 1 NC_017568.1 identified by match to protein family HMM PF01171, match to protein family HMM TIGR02432, match to protein family HMM TIGR02433; tRNA(Ile)-lysidine synthetase 2359518 tilS 12612043 tilS Staphylococcus pseudintermedius ED99 tRNA(Ile)-lysidine synthetase YP_006016360.1 2358229 R 984892 CDS YP_006016361.1 386320198 12612044 complement(2359601..2359978) 1 NC_017568.1 identified by match to protein family HMM PF00575; S1 RNA binding domain-containing protein 2359978 12612044 SPSE_2303 Staphylococcus pseudintermedius ED99 S1 RNA binding domain-containing protein YP_006016361.1 2359601 R 984892 CDS YP_006016362.1 386320199 12612045 complement(2360118..2360507) 1 NC_017568.1 identified by match to protein family HMM PF04977; cell-division initiation protein 2360507 12612045 SPSE_2304 Staphylococcus pseudintermedius ED99 cell-division initiation protein YP_006016362.1 2360118 R 984892 CDS YP_006016363.1 386320200 12612046 complement(2360535..2360792) 1 NC_017568.1 identified by match to protein family HMM PF01479; RNA-binding S4 domain-containing protein 2360792 12612046 SPSE_2305 Staphylococcus pseudintermedius ED99 RNA-binding S4 domain-containing protein YP_006016363.1 2360535 R 984892 CDS YP_006016364.1 386320201 12612047 complement(2360782..2361966) 1 NC_017568.1 identified by match to protein family HMM PF00590, match to protein family HMM PF03819; tetrapyrrole (corrin/porphyrin) methylase 2361966 12612047 SPSE_2306 Staphylococcus pseudintermedius ED99 tetrapyrrole (corrin/porphyrin) methylase YP_006016364.1 2360782 R 984892 CDS YP_006016365.1 386320202 12612048 complement(2361963..2363495) 1 NC_017568.1 identified by match to protein family HMM PF01943, match to protein family HMM PF03023; polysaccharide biosynthesis protein 2363495 12612048 SPSE_2307 Staphylococcus pseudintermedius ED99 polysaccharide biosynthesis protein YP_006016365.1 2361963 R 984892 CDS YP_006016366.1 386320203 12612049 complement(2363485..2366997) 1 NC_017568.1 identified by match to protein family HMM PF00270, match to protein family HMM PF00271, match to protein family HMM PF02559, match to protein family HMM PF03461, match to protein family HMM PF04851, match to protein family HMM TIGR00580; transcription-repair coupling factor 2366997 mfd 12612049 mfd Staphylococcus pseudintermedius ED99 transcription-repair coupling factor YP_006016366.1 2363485 R 984892 CDS YP_006016367.1 386320204 12612050 complement(2366994..2367566) 1 NC_017568.1 identified by match to protein family HMM PF01195, match to protein family HMM TIGR00447; peptidyl-tRNA hydrolase 2367566 pth 12612050 pth Staphylococcus pseudintermedius ED99 peptidyl-tRNA hydrolase YP_006016367.1 2366994 R 984892 CDS YP_006016368.1 386320205 12612051 complement(2368026..2368676) 1 NC_017568.1 identified by match to protein family HMM PF01386, match to protein family HMM TIGR00731; 50S ribosomal protein L25 2368676 rplY 12612051 rplY Staphylococcus pseudintermedius ED99 50S ribosomal protein L25 YP_006016368.1 2368026 R 984892 CDS YP_006016369.1 386320206 12612052 complement(2368814..2369779) 1 NC_017568.1 identified by match to protein family HMM PF00156, match to protein family HMM TIGR01251; ribose-phosphate pyrophosphokinase 2369779 prs 12612052 prs Staphylococcus pseudintermedius ED99 ribose-phosphate pyrophosphokinase YP_006016369.1 2368814 R 984892 CDS YP_006016370.1 386320207 12612053 complement(2369855..2371219) 1 NC_017568.1 identified by match to protein family HMM PF00132, match to protein family HMM PF00483, match to protein family HMM PF01128, match to protein family HMM TIGR01173; UDP-N-acetylglucosamine diphosphorylase 2371219 glmU 12612053 glmU Staphylococcus pseudintermedius ED99 UDP-N-acetylglucosamine diphosphorylase YP_006016370.1 2369855 R 984892 CDS YP_006016371.1 386320208 12612054 complement(2371501..2371815) 1 NC_017568.1 identified by match to protein family HMM PF04026; regulatory protein SpoVG 2371815 spoVG 12612054 spoVG Staphylococcus pseudintermedius ED99 regulatory protein SpoVG YP_006016371.1 2371501 R 984892 CDS YP_006016372.1 386320209 12612055 complement(2371894..2372274) 1 NC_017568.1 identified by match to protein family HMM PF01042, match to protein family HMM TIGR00004; endoribonuclease L-PSP 2372274 12612055 SPSE_2314 Staphylococcus pseudintermedius ED99 endoribonuclease L-PSP YP_006016372.1 2371894 R 984892 CDS YP_006016373.1 386320210 12612056 complement(2372299..2373120) 1 NC_017568.1 identified by match to protein family HMM PF00156, match to protein family HMM PF09182, match to protein family HMM TIGR01743; pur operon repressor 2373120 purR 12612056 purR Staphylococcus pseudintermedius ED99 pur operon repressor YP_006016373.1 2372299 R 984892 CDS YP_006016374.1 386320211 12612057 complement(2373142..2373990) 1 NC_017568.1 identified by match to protein family HMM PF00288, match to protein family HMM PF08544, match to protein family HMM TIGR00154; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 2373990 ispE 12612057 ispE Staphylococcus pseudintermedius ED99 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_006016374.1 2373142 R 984892 CDS YP_006016375.1 386320212 12612058 complement(2374381..2374647) 1 NC_017568.1 identified by match to protein family HMM PF06257; hypothetical protein 2374647 12612058 SPSE_2317 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016375.1 2374381 R 984892 CDS YP_006016376.1 386320213 12612059 complement(2374747..2375637) 1 NC_017568.1 identified by match to protein family HMM PF00398, match to protein family HMM TIGR00755; dimethyladenosine transferase 2375637 ksgA 12612059 ksgA Staphylococcus pseudintermedius ED99 dimethyladenosine transferase YP_006016376.1 2374747 R 984892 CDS YP_006016377.1 386320214 12612060 complement(2375642..2376181) 1 NC_017568.1 identified by match to protein family HMM PF01751, match to protein family HMM TIGR00334; primase-like protein 2376181 12612060 SPSE_2319 Staphylococcus pseudintermedius ED99 primase-like protein YP_006016377.1 2375642 R 984892 CDS YP_006016378.1 386320215 12612061 complement(2376221..2376988) 1 NC_017568.1 identified by match to protein family HMM PF01026, match to protein family HMM PF04909, match to protein family HMM TIGR00010; TatD family hydrolase 2376988 12612061 SPSE_2320 Staphylococcus pseudintermedius ED99 TatD family hydrolase YP_006016378.1 2376221 R 984892 CDS YP_006016379.1 386320216 12612062 complement(2377432..2379405) 1 NC_017568.1 identified by match to protein family HMM PF01588, match to protein family HMM PF09334, match to protein family HMM TIGR00398, match to protein family HMM TIGR00399; methionyl-tRNA synthetase 2379405 metG 12612062 metG Staphylococcus pseudintermedius ED99 methionyl-tRNA synthetase YP_006016379.1 2377432 R 984892 CDS YP_006016380.1 386320217 12612063 complement(2379496..2380329) 1 NC_017568.1 identified by match to protein family HMM PF00590, match to protein family HMM TIGR00096; tetrapyrrole methylase family protein 2380329 12612063 SPSE_2322 Staphylococcus pseudintermedius ED99 tetrapyrrole methylase family protein YP_006016380.1 2379496 R 984892 CDS YP_006016381.1 386320218 12612064 complement(2380331..2380579) 1 NC_017568.1 identified by match to protein family HMM PF01541; hypothetical protein 2380579 12612064 SPSE_2323 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016381.1 2380331 R 984892 CDS YP_006016382.1 386320219 12612065 complement(2380572..2381297) 1 NC_017568.1 identified by match to protein family HMM PF05175; hypothetical protein 2381297 12612065 SPSE_2324 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016382.1 2380572 R 984892 CDS YP_006016383.1 386320220 12612066 complement(2381308..2381673) 1 NC_017568.1 identified by match to protein family HMM PF06156; DNA replication initiation control protein YabA 2381673 12612066 SPSE_2325 Staphylococcus pseudintermedius ED99 DNA replication initiation control protein YabA YP_006016383.1 2381308 R 984892 CDS YP_006016384.1 386320221 12612067 complement(2381686..2382489) 1 NC_017568.1 identified by match to protein family HMM PF04468; signal peptidase II 2382489 12612067 SPSE_2326 Staphylococcus pseudintermedius ED99 signal peptidase II YP_006016384.1 2381686 R 984892 CDS YP_006016385.1 386320222 12612068 complement(2382495..2383427) 1 NC_017568.1 DNA polymerase III subunit delta' 2383427 12612068 SPSE_2327 Staphylococcus pseudintermedius ED99 DNA polymerase III subunit delta' YP_006016385.1 2382495 R 984892 CDS YP_006016386.1 386320223 12612069 complement(2383673..2384002) 1 NC_017568.1 identified by match to protein family HMM PF06153; hypothetical protein 2384002 12612069 SPSE_2328 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016386.1 2383673 R 984892 CDS YP_006016387.1 386320224 12612070 complement(2384072..2384689) 1 NC_017568.1 identified by match to protein family HMM PF02223, match to protein family HMM TIGR00041; thymidylate kinase 2384689 tmk 12612070 tmk Staphylococcus pseudintermedius ED99 thymidylate kinase YP_006016387.1 2384072 R 984892 CDS YP_006016388.1 386320225 12612071 complement(2384692..2386032) 1 NC_017568.1 identified by match to protein family HMM PF01276, match to protein family HMM PF03711; Orn Lys Arg decarboxylase family protein 2386032 12612071 SPSE_2330 Staphylococcus pseudintermedius ED99 Orn Lys Arg decarboxylase family protein YP_006016388.1 2384692 R 984892 CDS YP_006016389.1 386320226 12612072 complement(2386364..2386774) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 2386774 12612072 SPSE_2331 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016389.1 2386364 R 984892 CDS YP_006016390.1 386320227 12612076 complement(2393575..2394171) 1 NC_017568.1 identified by match to protein family HMM PF01751, match to protein family HMM PF02132, match to protein family HMM TIGR00615; recombination protein RecR 2394171 recR 12612076 recR Staphylococcus pseudintermedius ED99 recombination protein RecR YP_006016390.1 2393575 R 984892 CDS YP_006016391.1 386320228 12612077 complement(2394173..2394493) 1 NC_017568.1 identified by match to protein family HMM PF02575, match to protein family HMM TIGR00103; hypothetical protein 2394493 12612077 SPSE_2336 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016391.1 2394173 R 984892 CDS YP_006016392.1 386320229 12612078 complement(2394585..2396288) 1 NC_017568.1 identified by match to protein family HMM PF00004, match to protein family HMM TIGR02397; DNA polymerase III subunits gamma and tau 2396288 dnaX 12612078 dnaX Staphylococcus pseudintermedius ED99 DNA polymerase III subunits gamma and tau YP_006016392.1 2394585 R 984892 CDS YP_006016393.1 386320230 12612079 complement(2396355..2396888) 1 NC_017568.1 identified by match to protein family HMM PF00583; GNAT family acetyltransferase 2396888 12612079 SPSE_2338 Staphylococcus pseudintermedius ED99 GNAT family acetyltransferase YP_006016393.1 2396355 R 984892 CDS YP_006016394.1 386320231 12612081 complement(2397355..2398089) 1 NC_017568.1 identified by match to protein family HMM PF00392, match to protein family HMM PF07702; trehalose operon transcriptional repressor 2398089 treR 12612081 treR Staphylococcus pseudintermedius ED99 trehalose operon transcriptional repressor YP_006016394.1 2397355 R 984892 CDS YP_006016395.1 386320232 12612083 complement(2398111..2399742) 1 NC_017568.1 identified by match to protein family HMM PF00128, match to protein family HMM TIGR02403; alpha,alpha-phosphotrehalase 2399742 treC 12612083 treC Staphylococcus pseudintermedius ED99 alpha,alpha-phosphotrehalase YP_006016395.1 2398111 R 984892 CDS YP_006016396.1 386320233 12612085 complement(2399787..2401223) 1 NC_017568.1 identified by match to protein family HMM PF00367, match to protein family HMM PF02378, match to protein family HMM TIGR00826, match to protein family HMM TIGR01992; PTS system trehalose-specific transporter subunit IIBC 2401223 treP 12612085 treP Staphylococcus pseudintermedius ED99 PTS system trehalose-specific transporter subunit IIBC YP_006016396.1 2399787 R 984892 CDS YP_006016397.1 386320234 12612088 complement(2401702..2403159) 1 NC_017568.1 identified by match to protein family HMM PF00070, match to protein family HMM PF07992, match to protein family HMM TIGR01317; glutamate synthase small subunit 2403159 gltD 12612088 gltD Staphylococcus pseudintermedius ED99 glutamate synthase small subunit YP_006016397.1 2401702 R 984892 CDS YP_006016398.1 386320235 12612089 complement(2403172..2407677) 1 NC_017568.1 identified by match to protein family HMM PF00310, match to protein family HMM PF01493, match to protein family HMM PF01645, match to protein family HMM PF04898; glutamate synthase large subunit 2407677 gltB 12612089 gltB Staphylococcus pseudintermedius ED99 glutamate synthase large subunit YP_006016398.1 2403172 R 984892 CDS YP_006016399.1 386320236 12612090 2407800..2408678 1 NC_017568.1 identified by match to protein family HMM PF00126; transcriptional regulatory protein GltC 2408678 gltC 12612090 gltC Staphylococcus pseudintermedius ED99 transcriptional regulatory protein GltC YP_006016399.1 2407800 D 984892 CDS YP_006016400.1 386320237 12612091 2408691..2409800 1 NC_017568.1 identified by match to protein family HMM PF07907; hypothetical protein 2409800 12612091 SPSE_2347 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016400.1 2408691 D 984892 CDS YP_006016401.1 386320238 12612093 2409797..2410570 1 NC_017568.1 identified by match to protein family HMM PF07907; membrane protein 2410570 12612093 SPSE_2348 Staphylococcus pseudintermedius ED99 membrane protein YP_006016401.1 2409797 D 984892 CDS YP_006016402.1 386320239 12612094 2410619..2412880 1 NC_017568.1 identified by match to protein family HMM PF00005; excinuclease ABC subunit A 2412880 12612094 SPSE_2349 Staphylococcus pseudintermedius ED99 excinuclease ABC subunit A YP_006016402.1 2410619 D 984892 CDS YP_006016403.1 386320240 12612095 complement(2413088..2413603) 1 NC_017568.1 immunodominant staphylococcal antigen B 2413603 12612095 SPSE_2350 Staphylococcus pseudintermedius ED99 immunodominant staphylococcal antigen B YP_006016403.1 2413088 R 984892 CDS YP_006016404.1 386320241 12612096 2413908..2414183 1 NC_017568.1 hypothetical protein 2414183 12612096 SPSE_2351 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016404.1 2413908 D 984892 CDS YP_006016405.1 386320242 12612097 complement(2414564..2415571) 1 NC_017568.1 identified by match to protein family HMM PF01476, match to protein family HMM PF05257; N-acetylmuramoyl-L-alanine amidase Sle1 2415571 12612097 SPSE_2352 Staphylococcus pseudintermedius ED99 N-acetylmuramoyl-L-alanine amidase Sle1 YP_006016405.1 2414564 R 984892 CDS YP_006016406.1 386320243 12612098 complement(2415909..2416115) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 2416115 12612098 SPSE_2353 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016406.1 2415909 R 984892 CDS YP_006016407.1 386320244 12612099 complement(2416417..2416539) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 2416539 12612099 SPSE_2354 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016407.1 2416417 R 984892 CDS YP_006016408.1 386320245 12612100 complement(2416711..2417853) 1 NC_017568.1 identified by match to protein family HMM PF01053; cystathionine gamma-synthase 2417853 metB2 12612100 metB2 Staphylococcus pseudintermedius ED99 cystathionine gamma-synthase YP_006016408.1 2416711 R 984892 CDS YP_006016409.1 386320246 12612101 complement(2417846..2418751) 1 NC_017568.1 identified by match to protein family HMM PF00291; cysteine synthase/cystathionine beta-synthase family protein 2418751 12612101 SPSE_2356 Staphylococcus pseudintermedius ED99 cysteine synthase/cystathionine beta-synthase family protein YP_006016409.1 2417846 R 984892 CDS YP_006016410.1 386320247 12612102 2419034..2420359 1 NC_017568.1 identified by match to protein family HMM PF00135; para-nitrobenzyl esterase 2420359 pnbA 12612102 pnbA Staphylococcus pseudintermedius ED99 para-nitrobenzyl esterase YP_006016410.1 2419034 D 984892 CDS YP_006016411.1 386320248 12612103 complement(2420350..2420469) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 2420469 12612103 SPSE_2358 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016411.1 2420350 R 984892 CDS YP_006016412.1 386320249 12612104 complement(2420509..2421837) 1 NC_017568.1 identified by match to protein family HMM PF00209; sodium-dependent symporter protein 2421837 12612104 SPSE_2359 Staphylococcus pseudintermedius ED99 sodium-dependent symporter protein YP_006016412.1 2420509 R 984892 CDS YP_006016413.1 386320250 12612105 2422021..2422209 1 NC_017568.1 hypothetical protein 2422209 12612105 SPSE_2360 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016413.1 2422021 D 984892 CDS YP_006016414.1 386320251 12612106 complement(2422402..2423091) 1 NC_017568.1 identified by match to protein family HMM PF00072, match to protein family HMM PF00486; two-component response regulator KdpE 2423091 kdpE 12612106 kdpE Staphylococcus pseudintermedius ED99 two-component response regulator KdpE YP_006016414.1 2422402 R 984892 CDS YP_006016415.1 386320252 12612107 complement(2423105..2425729) 1 NC_017568.1 identified by match to protein family HMM PF00512, match to protein family HMM PF02518, match to protein family HMM PF02702; two component sensor protein KdpD 2425729 kdpD 12612107 kdpD Staphylococcus pseudintermedius ED99 two component sensor protein KdpD YP_006016415.1 2423105 R 984892 CDS YP_006016416.1 386320253 12612108 2426003..2427679 1 NC_017568.1 identified by match to protein family HMM PF03814, match to protein family HMM TIGR00680; potassium-transporting ATPase subunit A 2427679 kdpA 12612108 kdpA Staphylococcus pseudintermedius ED99 potassium-transporting ATPase subunit A YP_006016416.1 2426003 D 984892 CDS YP_006016417.1 386320254 12612109 2427695..2429719 1 NC_017568.1 identified by match to protein family HMM PF00122, match to protein family HMM PF00702, match to protein family HMM TIGR01494, match to protein family HMM TIGR01497; potassium-transporting ATPase, B subunit 2429719 kdpB 12612109 kdpB Staphylococcus pseudintermedius ED99 potassium-transporting ATPase, B subunit YP_006016417.1 2427695 D 984892 CDS YP_006016418.1 386320255 12612110 2429730..2430290 1 NC_017568.1 identified by match to protein family HMM PF02669, match to protein family HMM TIGR00681; potassium-transporting ATPase subunit C 2430290 kdpC 12612110 kdpC Staphylococcus pseudintermedius ED99 potassium-transporting ATPase subunit C YP_006016418.1 2429730 D 984892 CDS YP_006016419.1 386320256 12612112 complement(2431312..2432127) 1 NC_017568.1 identified by match to protein family HMM PF03618; putative phosphotransferase 2432127 12612112 SPSE_2367 Staphylococcus pseudintermedius ED99 putative phosphotransferase YP_006016419.1 2431312 R 984892 CDS YP_006016420.1 386320257 12612113 complement(2432129..2434753) 1 NC_017568.1 identified by match to protein family HMM PF00391, match to protein family HMM PF01326, match to protein family HMM PF02896, match to protein family HMM TIGR01828; pyruvate, phosphate dikinase 2434753 ppdK 12612113 ppdK Staphylococcus pseudintermedius ED99 pyruvate, phosphate dikinase YP_006016420.1 2432129 R 984892 CDS YP_006016421.1 386320258 12612114 2434989..2435153 1 NC_017568.1 hypothetical protein 2435153 12612114 SPSE_2369 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016421.1 2434989 D 984892 CDS YP_006016422.1 386320259 12612115 2435748..2437256 1 NC_017568.1 staphylocoagulase 2437256 coa 12612115 coa Staphylococcus pseudintermedius ED99 staphylocoagulase YP_006016422.1 2435748 D 984892 CDS YP_006016423.1 386320260 12612116 2437450..2438154 1 NC_017568.1 identified by match to protein family HMM PF02876, match to protein family HMM PF09199; superantigen-like protein 2438154 12612116 SPSE_2371 Staphylococcus pseudintermedius ED99 superantigen-like protein YP_006016423.1 2437450 D 984892 CDS YP_006016424.1 386320261 12612117 complement(2438272..2438655) 1 NC_017568.1 identified by match to protein family HMM PF02261, match to protein family HMM TIGR00223; aspartate 1-decarboxylase 2438655 panD 12612117 panD Staphylococcus pseudintermedius ED99 aspartate 1-decarboxylase YP_006016424.1 2438272 R 984892 CDS YP_006016425.1 386320262 12612118 complement(2438652..2439512) 1 NC_017568.1 identified by match to protein family HMM PF02569, match to protein family HMM TIGR00018; pantoate--beta-alanine ligase 2439512 panC 12612118 panC Staphylococcus pseudintermedius ED99 pantoate--beta-alanine ligase YP_006016425.1 2438652 R 984892 CDS YP_006016426.1 386320263 12612119 complement(2439509..2440321) 1 NC_017568.1 identified by match to protein family HMM PF02548, match to protein family HMM TIGR00222; 3-methyl-2-oxobutanoate hydroxymethyltransferase 2440321 panB 12612119 panB Staphylococcus pseudintermedius ED99 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_006016426.1 2439509 R 984892 CDS YP_006016427.1 386320264 12612120 2440573..2441433 1 NC_017568.1 identified by match to protein family HMM PF01210, match to protein family HMM PF02558, match to protein family HMM PF08546, match to protein family HMM TIGR00745; 2-dehydropantoate 2-reductase 2441433 panE 12612120 panE Staphylococcus pseudintermedius ED99 2-dehydropantoate 2-reductase YP_006016427.1 2440573 D 984892 CDS YP_006016428.1 386320265 12612121 complement(2441524..2442849) 1 NC_017568.1 identified by match to protein family HMM PF02056; maltose-6'-phosphate glucosidase 2442849 glvA 12612121 glvA Staphylococcus pseudintermedius ED99 maltose-6'-phosphate glucosidase YP_006016428.1 2441524 R 984892 CDS YP_006016429.1 386320266 12612122 complement(2442850..2444454) 1 NC_017568.1 identified by match to protein family HMM PF00367, match to protein family HMM PF02378, match to protein family HMM TIGR00826, match to protein family HMM TIGR02005; PTS system maltose-specific EIICB component 2444454 12612122 SPSE_2377 Staphylococcus pseudintermedius ED99 PTS system maltose-specific EIICB component YP_006016429.1 2442850 R 984892 CDS YP_006016430.1 386320267 12612123 2444705..2445460 1 NC_017568.1 identified by match to protein family HMM PF01380, match to protein family HMM PF01418; transcriptional regulator, rpiR family 2445460 12612123 SPSE_2378 Staphylococcus pseudintermedius ED99 transcriptional regulator, rpiR family YP_006016430.1 2444705 D 984892 CDS YP_006016431.1 386320268 12612124 complement(2445586..2446146) 1 NC_017568.1 hypothetical protein 2446146 12612124 SPSE_2379 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016431.1 2445586 R 984892 CDS YP_006016432.1 386320269 12612125 complement(2446278..2447627) 1 NC_017568.1 identified by match to protein family HMM PF00581, match to protein family HMM PF00753; metallo-beta-lactamase superfamily protein 2447627 12612125 SPSE_2380 Staphylococcus pseudintermedius ED99 metallo-beta-lactamase superfamily protein YP_006016432.1 2446278 R 984892 CDS YP_006016433.1 386320270 12612126 complement(2447646..2448722) 1 NC_017568.1 identified by match to protein family HMM PF00581, match to protein family HMM PF01206; rhodanese-like domain-containing protein 2448722 12612126 SPSE_2381 Staphylococcus pseudintermedius ED99 rhodanese-like domain-containing protein YP_006016433.1 2447646 R 984892 CDS YP_006016434.1 386320271 12612127 2448862..2449122 1 NC_017568.1 identified by match to protein family HMM PF02583; hypothetical protein 2449122 12612127 SPSE_2382 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016434.1 2448862 D 984892 CDS YP_006016435.1 386320272 12612128 2449122..2449871 1 NC_017568.1 identified by match to protein family HMM PF01925; hypothetical protein 2449871 12612128 SPSE_2383 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016435.1 2449122 D 984892 CDS YP_006016436.1 386320273 12612129 2450064..2451236 1 NC_017568.1 identified by match to protein family HMM PF07690; putative sugar transport protein 2451236 12612129 SPSE_2384 Staphylococcus pseudintermedius ED99 putative sugar transport protein YP_006016436.1 2450064 D 984892 CDS YP_006016437.1 386320274 12612130 2451480..2451908 1 NC_017568.1 identified by match to protein family HMM PF03992; hypothetical protein 2451908 12612130 SPSE_2385 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016437.1 2451480 D 984892 CDS YP_006016438.1 386320275 12612131 complement(2452060..2453346) 1 NC_017568.1 identified by match to protein family HMM PF00078, match to protein family HMM PF08388; RNA-directed DNA polymerase 2453346 12612131 SPSE_2386 Staphylococcus pseudintermedius ED99 RNA-directed DNA polymerase YP_006016438.1 2452060 R 984892 CDS YP_006016439.1 386320276 12612132 complement(2454111..2454956) 1 NC_017568.1 identified by match to protein family HMM PF00144; beta-lactamase 2454956 blaZ-2 12612132 blaZ-2 Staphylococcus pseudintermedius ED99 beta-lactamase YP_006016439.1 2454111 R 984892 CDS YP_006016440.1 386320277 12612133 2455063..2456820 1 NC_017568.1 identified by match to protein family HMM PF00905, match to protein family HMM PF05569; regulatory protein blaR1 2456820 blaR1-2 12612133 blaR1-2 Staphylococcus pseudintermedius ED99 regulatory protein blaR1 YP_006016440.1 2455063 D 984892 CDS YP_006016441.1 386320278 12612134 2456810..2457190 1 NC_017568.1 identified by match to protein family HMM PF03965; penicillinase repressor 2457190 blaI-2 12612134 blaI-2 Staphylococcus pseudintermedius ED99 penicillinase repressor YP_006016441.1 2456810 D 984892 CDS YP_006016442.1 386320279 12612135 2457454..2458047 1 NC_017568.1 identified by match to protein family HMM PF00239, match to protein family HMM PF02796; transposon Tn552 resolvase 2458047 12612135 SPSE_2390 Staphylococcus pseudintermedius ED99 transposon Tn552 resolvase YP_006016442.1 2457454 D 984892 CDS YP_006016443.1 386320280 12612136 2458019..2459461 1 NC_017568.1 identified by match to protein family HMM PF00665, match to protein family HMM PF09299; transposase for transposon Tn552 2459461 12612136 SPSE_2391 Staphylococcus pseudintermedius ED99 transposase for transposon Tn552 YP_006016443.1 2458019 D 984892 CDS YP_006016444.1 386320281 12612137 2459454..2460269 1 NC_017568.1 putative ATP-binding protein 2460269 12612137 SPSE_2392 Staphylococcus pseudintermedius ED99 putative ATP-binding protein YP_006016444.1 2459454 D 984892 CDS YP_006016445.1 386320282 12612138 complement(2460521..2461711) 1 NC_017568.1 identified by match to protein family HMM PF07690; antibiotic resistance transport protein 2461711 12612138 SPSE_2393 Staphylococcus pseudintermedius ED99 antibiotic resistance transport protein YP_006016445.1 2460521 R 984892 CDS YP_006016446.1 386320283 12612139 complement(2461723..2462463) 1 NC_017568.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 2462463 12612139 SPSE_2394 Staphylococcus pseudintermedius ED99 ABC transporter ATP-binding protein YP_006016446.1 2461723 R 984892 CDS YP_006016447.1 386320284 12612140 complement(2462457..2463275) 1 NC_017568.1 identified by match to protein family HMM PF00005; oligopeptide transporter putative ATPase domain 2463275 12612140 SPSE_2395 Staphylococcus pseudintermedius ED99 oligopeptide transporter putative ATPase domain YP_006016447.1 2462457 R 984892 CDS YP_006016448.1 386320285 12612141 complement(2463275..2464138) 1 NC_017568.1 identified by match to protein family HMM PF00528; oligopeptide transport system permease 2464138 12612141 SPSE_2396 Staphylococcus pseudintermedius ED99 oligopeptide transport system permease YP_006016448.1 2463275 R 984892 CDS YP_006016449.1 386320286 12612142 complement(2464140..2465072) 1 NC_017568.1 identified by match to protein family HMM PF00528; oligopeptide transport system permease protein 2465072 12612142 SPSE_2397 Staphylococcus pseudintermedius ED99 oligopeptide transport system permease protein YP_006016449.1 2464140 R 984892 CDS YP_006016450.1 386320287 12612143 complement(2465085..2466686) 1 NC_017568.1 identified by match to protein family HMM PF00496, match to protein family HMM TIGR02294; nickel ABC transporter periplasmic nickel-binding protein 2466686 nikA 12612143 nikA Staphylococcus pseudintermedius ED99 nickel ABC transporter periplasmic nickel-binding protein YP_006016450.1 2465085 R 984892 CDS YP_006016451.1 386320288 12612144 complement(2466921..2468216) 1 NC_017568.1 hypothetical protein 2468216 12612144 SPSE_2399 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016451.1 2466921 R 984892 CDS YP_006016452.1 386320289 12612145 complement(2468219..2469037) 1 NC_017568.1 hypothetical protein 2469037 12612145 SPSE_2400 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016452.1 2468219 R 984892 CDS YP_006016453.1 386320290 12612146 complement(2469047..2469856) 1 NC_017568.1 diaminopimelate epimerase 2469856 12612146 SPSE_2401 Staphylococcus pseudintermedius ED99 diaminopimelate epimerase YP_006016453.1 2469047 R 984892 CDS YP_006016454.1 386320291 12612147 complement(2470222..2470944) 1 NC_017568.1 lipoprotein 2470944 12612147 SPSE_2402 Staphylococcus pseudintermedius ED99 lipoprotein YP_006016454.1 2470222 R 984892 CDS YP_006016455.1 386320292 12612148 2471303..2472025 1 NC_017568.1 identified by match to protein family HMM PF00117, match to protein family HMM PF07722; class I glutamine amidotransferase 2472025 12612148 SPSE_2403 Staphylococcus pseudintermedius ED99 class I glutamine amidotransferase YP_006016455.1 2471303 D 984892 CDS YP_006016456.1 386320293 12612149 2472031..2473416 1 NC_017568.1 identified by match to protein family HMM PF00324; amino acid permease 2473416 12612149 SPSE_2404 Staphylococcus pseudintermedius ED99 amino acid permease YP_006016456.1 2472031 D 984892 CDS YP_006016457.1 386320294 12612150 complement(2473660..2475714) 1 NC_017568.1 identified by match to protein family HMM PF04650, match to protein family HMM TIGR01168; triacylglycerol lipase 2475714 12612150 SPSE_2405 Staphylococcus pseudintermedius ED99 triacylglycerol lipase YP_006016457.1 2473660 R 984892 CDS YP_006016458.1 386320295 12612151 complement(2476373..2478325) 1 NC_017568.1 identified by match to protein family HMM TIGR01167, match to protein family HMM TIGR01168; LPXTG-motif cell wall anchor domain-containing protein 2478325 spsN 12612151 spsN Staphylococcus pseudintermedius ED99 LPXTG-motif cell wall anchor domain-containing protein YP_006016458.1 2476373 R 984892 CDS YP_006016459.1 386320296 12612152 2479340..2480170 1 NC_017568.1 identified by match to protein family HMM PF00565, match to protein family HMM PF05901; thermonuclease 2480170 nucC 12612152 nucC Staphylococcus pseudintermedius ED99 thermonuclease YP_006016459.1 2479340 D 984892 CDS YP_006016460.1 386320297 12612153 2480580..2481494 1 NC_017568.1 identified by match to protein family HMM PF03595; exfoliative toxin A 2481494 speta 12612153 speta Staphylococcus pseudintermedius ED99 exfoliative toxin A YP_006016460.1 2480580 D 984892 CDS YP_006016461.1 386320298 12612154 complement(2482120..2482539) 1 NC_017568.1 hypothetical protein 2482539 12612154 SPSE_2409 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016461.1 2482120 R 984892 CDS YP_006016462.1 386320299 12612155 complement(2482896..2483093) 1 NC_017568.1 hypothetical protein 2483093 12612155 SPSE_2410 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016462.1 2482896 R 984892 CDS YP_006016463.1 386320300 12612156 complement(2483333..2483593) 1 NC_017568.1 hypothetical protein 2483593 12612156 SPSE_2411 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016463.1 2483333 R 984892 CDS YP_006016464.1 386320301 12612159 2486071..2487261 1 NC_017568.1 identified by match to protein family HMM PF00872; transposase, IS256 family 2487261 12612159 SPSE_2415 Staphylococcus pseudintermedius ED99 transposase, IS256 family YP_006016464.1 2486071 D 984892 CDS YP_006016465.1 386320302 12612160 2487395..2489584 1 NC_017568.1 hypothetical protein 2489584 12612160 SPSE_2416 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016465.1 2487395 D 984892 CDS YP_006016466.1 386320303 12612161 2489581..2491374 1 NC_017568.1 identified by match to protein family HMM PF00580; hypothetical protein 2491374 12612161 SPSE_2417 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016466.1 2489581 D 984892 CDS YP_006016467.1 386320304 12612162 2491574..2491888 1 NC_017568.1 identified by match to protein family HMM PF06125; hypothetical protein 2491888 12612162 SPSE_2418 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016467.1 2491574 D 984892 CDS YP_006016468.1 386320305 12612163 2491909..2492286 1 NC_017568.1 identified by match to protein family HMM PF06125; hypothetical protein 2492286 12612163 SPSE_2419 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016468.1 2491909 D 984892 CDS YP_006016469.1 386320306 12612164 2492296..2493069 1 NC_017568.1 hypothetical protein 2493069 12612164 SPSE_2420 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016469.1 2492296 D 984892 CDS YP_006016470.1 386320307 12612165 2493091..2494494 1 NC_017568.1 identified by match to protein family HMM PF01580; hypothetical protein 2494494 12612165 SPSE_2421 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016470.1 2493091 D 984892 CDS YP_006016471.1 386320308 12612166 2494676..2495860 1 NC_017568.1 identified by match to protein family HMM PF01381, match to protein family HMM PF02486; Cro/CI family transcriptional regulator 2495860 12612166 SPSE_2422 Staphylococcus pseudintermedius ED99 Cro/CI family transcriptional regulator YP_006016471.1 2494676 D 984892 CDS YP_006016472.1 386320309 12612167 2496144..2496365 1 NC_017568.1 hypothetical protein 2496365 12612167 SPSE_2423 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016472.1 2496144 D 984892 CDS YP_006016473.1 386320310 12612168 2496407..2497186 1 NC_017568.1 hypothetical protein 2497186 12612168 SPSE_2424 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016473.1 2496407 D 984892 CDS YP_006016474.1 386320311 12612169 2497247..2497747 1 NC_017568.1 identified by match to protein family HMM PF07275; hypothetical protein 2497747 12612169 SPSE_2425 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016474.1 2497247 D 984892 CDS YP_006016475.1 386320312 12612170 2497803..2498441 1 NC_017568.1 hypothetical protein 2498441 12612170 SPSE_2426 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016475.1 2497803 D 984892 CDS YP_006016476.1 386320313 12612171 2498513..2498908 1 NC_017568.1 hypothetical protein 2498908 12612171 SPSE_2427 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016476.1 2498513 D 984892 CDS YP_006016477.1 386320314 12612172 2498892..2501345 1 NC_017568.1 hypothetical protein 2501345 12612172 SPSE_2428 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016477.1 2498892 D 984892 CDS YP_006016478.1 386320315 12612173 2501342..2503369 1 NC_017568.1 hypothetical protein 2503369 12612173 SPSE_2429 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016478.1 2501342 D 984892 CDS YP_006016479.1 386320316 12612174 2503366..2504388 1 NC_017568.1 identified by match to protein family HMM PF00877; lipoprotein, NLP/P60 family 2504388 12612174 SPSE_2430 Staphylococcus pseudintermedius ED99 lipoprotein, NLP/P60 family YP_006016479.1 2503366 D 984892 CDS YP_006016480.1 386320317 12612175 2504405..2505334 1 NC_017568.1 hypothetical protein 2505334 12612175 SPSE_2431 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016480.1 2504405 D 984892 CDS YP_006016481.1 386320318 12612176 2505711..2507630 1 NC_017568.1 identified by match to protein family HMM PF00009, match to protein family HMM PF00679, match to protein family HMM PF03144, match to protein family HMM PF03764, match to protein family HMM TIGR00231; tetracycline resistance protein tetM 2507630 12612176 SPSE_2432 Staphylococcus pseudintermedius ED99 tetracycline resistance protein tetM YP_006016481.1 2505711 D 984892 CDS YP_006016482.1 386320319 12612177 complement(2507974..2508327) 1 NC_017568.1 identified by match to protein family HMM PF01381; transcriptional regulator 2508327 12612177 SPSE_2433 Staphylococcus pseudintermedius ED99 transcriptional regulator YP_006016482.1 2507974 R 984892 CDS YP_006016483.1 386320320 12612178 2508858..2509280 1 NC_017568.1 identified by match to protein family HMM PF04545, match to protein family HMM PF08281; hypothetical protein 2509280 12612178 SPSE_2434 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016483.1 2508858 D 984892 CDS YP_006016484.1 386320321 12612179 2509277..2509507 1 NC_017568.1 hypothetical protein 2509507 12612179 SPSE_2435 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016484.1 2509277 D 984892 CDS YP_006016485.1 386320322 12612180 2510005..2510205 1 NC_017568.1 hypothetical protein 2510205 12612180 SPSE_2436 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016485.1 2510005 D 984892 CDS YP_006016486.1 386320323 12612181 2510232..2511425 1 NC_017568.1 identified by match to protein family HMM PF00589; integrase 2511425 12612181 SPSE_2437 Staphylococcus pseudintermedius ED99 integrase YP_006016486.1 2510232 D 984892 CDS YP_006016487.1 386320324 12612182 complement(2511493..2513034) 1 NC_017568.1 identified by match to protein family HMM PF00117, match to protein family HMM PF00958, match to protein family HMM TIGR00884, match to protein family HMM TIGR00888; GMP synthase 2513034 guaA 12612182 guaA Staphylococcus pseudintermedius ED99 GMP synthase YP_006016487.1 2511493 R 984892 CDS YP_006016488.1 386320325 12612183 complement(2513057..2514523) 1 NC_017568.1 identified by match to protein family HMM PF00478, match to protein family HMM PF00571, match to protein family HMM TIGR01302; inosine-5'-monophosphate dehydrogenase 2514523 guaB 12612183 guaB Staphylococcus pseudintermedius ED99 inosine-5'-monophosphate dehydrogenase YP_006016488.1 2513057 R 984892 CDS YP_006016489.1 386320326 12612184 complement(2514561..2515829) 1 NC_017568.1 identified by match to protein family HMM PF00860, match to protein family HMM TIGR00801, match to protein family HMM TIGR03173; xanthine permease 2515829 pbuX 12612184 pbuX Staphylococcus pseudintermedius ED99 xanthine permease YP_006016489.1 2514561 R 984892 CDS YP_006016490.1 386320327 12612185 complement(2515826..2516410) 1 NC_017568.1 identified by match to protein family HMM PF00156, match to protein family HMM TIGR01744; xanthine phosphoribosyltransferase 2516410 xpt 12612185 xpt Staphylococcus pseudintermedius ED99 xanthine phosphoribosyltransferase YP_006016490.1 2515826 R 984892 CDS YP_006016491.1 386320328 12612186 2516871..2517293 1 NC_017568.1 hypothetical protein 2517293 12612186 SPSE_2443 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016491.1 2516871 D 984892 CDS YP_006016492.1 386320329 12612187 2517489..2518163 1 NC_017568.1 hypothetical protein 2518163 12612187 SPSE_2444 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016492.1 2517489 D 984892 CDS YP_006016493.1 386320330 12612188 2518277..2518876 1 NC_017568.1 hypothetical protein 2518876 12612188 SPSE_2445 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016493.1 2518277 D 984892 CDS YP_006016494.1 386320331 12612189 2519150..2520256 1 NC_017568.1 identified by match to protein family HMM PF01266; glycine oxidase 2520256 12612189 SPSE_2447 Staphylococcus pseudintermedius ED99 glycine oxidase YP_006016494.1 2519150 D 984892 CDS YP_006016495.1 386320332 12612190 2520331..2521722 1 NC_017568.1 identified by match to protein family HMM PF00375; sodium:dicarboxylate symporter family protein 2521722 12612190 SPSE_2448 Staphylococcus pseudintermedius ED99 sodium:dicarboxylate symporter family protein YP_006016495.1 2520331 D 984892 CDS YP_006016496.1 386320333 12612191 complement(2521816..2522460) 1 NC_017568.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 2522460 12612191 SPSE_2449 Staphylococcus pseudintermedius ED99 ABC transporter ATP-binding protein YP_006016496.1 2521816 R 984892 CDS YP_006016497.1 386320334 12612192 complement(2522457..2522786) 1 NC_017568.1 identified by match to protein family HMM TIGR01655; lipoprotein 2522786 12612192 SPSE_2450 Staphylococcus pseudintermedius ED99 lipoprotein YP_006016497.1 2522457 R 984892 CDS YP_006016498.1 386320335 12612193 complement(2522790..2524757) 1 NC_017568.1 identified by match to protein family HMM TIGR01654; bacteriocin-associated integral membrane protein 2524757 12612193 SPSE_2451 Staphylococcus pseudintermedius ED99 bacteriocin-associated integral membrane protein YP_006016498.1 2522790 R 984892 CDS YP_006016499.1 386320336 12612194 complement(2525015..2525770) 1 NC_017568.1 identified by match to protein family HMM PF00881; NADPH-dependent oxidoreductase 2525770 12612194 SPSE_2452 Staphylococcus pseudintermedius ED99 NADPH-dependent oxidoreductase YP_006016499.1 2525015 R 984892 CDS YP_006016500.1 386320337 12612195 2526323..2526892 1 NC_017568.1 identified by match to protein family HMM PF00578, match to protein family HMM PF08534, match to protein family HMM TIGR03137; alkyl hydroperoxide reductase subunit C 2526892 ahpC 12612195 ahpC Staphylococcus pseudintermedius ED99 alkyl hydroperoxide reductase subunit C YP_006016500.1 2526323 D 984892 CDS YP_006016501.1 386320338 12612196 2526907..2528430 1 NC_017568.1 identified by match to protein family HMM PF00070, match to protein family HMM PF07992, match to protein family HMM TIGR03140; alkyl hydroperoxide reductase F subunit 2528430 ahpF 12612196 ahpF Staphylococcus pseudintermedius ED99 alkyl hydroperoxide reductase F subunit YP_006016501.1 2526907 D 984892 CDS YP_006016502.1 386320339 12612197 complement(2528631..2529572) 1 NC_017568.1 identified by match to protein family HMM PF06207; hypothetical protein 2529572 12612197 SPSE_2455 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016502.1 2528631 R 984892 CDS YP_006016503.1 386320340 12612198 complement(2529690..2530679) 1 NC_017568.1 identified by match to protein family HMM PF04055, match to protein family HMM PF06968, match to protein family HMM TIGR00433; biotin synthase 2530679 bioB 12612198 bioB Staphylococcus pseudintermedius ED99 biotin synthase YP_006016503.1 2529690 R 984892 CDS YP_006016504.1 386320341 12612199 2530885..2531262 1 NC_017568.1 identified by match to protein family HMM PF08818; hypothetical protein 2531262 12612199 SPSE_2457 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016504.1 2530885 D 984892 CDS YP_006016505.1 386320342 12612200 2531579..2532604 1 NC_017568.1 identified by match to protein family HMM PF00005, match to protein family HMM PF09383; methionine import ATP-binding protein MetN 2532604 12612200 SPSE_2458 Staphylococcus pseudintermedius ED99 methionine import ATP-binding protein MetN YP_006016505.1 2531579 D 984892 CDS YP_006016506.1 386320343 12612201 2532598..2533257 1 NC_017568.1 identified by match to protein family HMM PF00528; ABC transporter permease 2533257 12612201 SPSE_2459 Staphylococcus pseudintermedius ED99 ABC transporter permease YP_006016506.1 2532598 D 984892 CDS YP_006016507.1 386320344 12612202 2533273..2534112 1 NC_017568.1 identified by match to protein family HMM PF03180; putative lipoprotein 2534112 12612202 SPSE_2460 Staphylococcus pseudintermedius ED99 putative lipoprotein YP_006016507.1 2533273 D 984892 CDS YP_006016508.1 386320345 12612203 complement(2534270..2535265) 1 NC_017568.1 identified by match to protein family HMM PF00962, match to protein family HMM TIGR01430; adenosine deaminase 2535265 add 12612203 add Staphylococcus pseudintermedius ED99 adenosine deaminase YP_006016508.1 2534270 R 984892 CDS YP_006016509.1 386320346 12612204 2535659..2537650 1 NC_017568.1 identified by match to protein family HMM PF00199, match to protein family HMM PF06628; catalase 2537650 katB 12612204 katB Staphylococcus pseudintermedius ED99 catalase YP_006016509.1 2535659 D 984892 CDS YP_006016510.1 386320347 12612206 complement(2539128..2539370) 1 NC_017568.1 identified by match to protein family HMM PF01084, match to protein family HMM TIGR00165; 30S ribosomal protein S18 2539370 rpsR 12612206 rpsR Staphylococcus pseudintermedius ED99 30S ribosomal protein S18 YP_006016510.1 2539128 R 984892 CDS YP_006016511.1 386320348 12612207 complement(2539424..2539930) 1 NC_017568.1 identified by match to protein family HMM PF00436, match to protein family HMM TIGR00621; single-stranded DNA-binding protein 2539930 ssb 12612207 ssb Staphylococcus pseudintermedius ED99 single-stranded DNA-binding protein YP_006016511.1 2539424 R 984892 CDS YP_006016512.1 386320349 12612208 complement(2539953..2540249) 1 NC_017568.1 identified by match to protein family HMM PF01250, match to protein family HMM TIGR00166; 30S ribosomal protein S6 2540249 rpsF 12612208 rpsF Staphylococcus pseudintermedius ED99 30S ribosomal protein S6 YP_006016512.1 2539953 R 984892 CDS YP_006016513.1 386320350 12612209 2540586..2542076 1 NC_017568.1 identified by match to protein family HMM PF02216; IgG-binding protein 2542076 spsK 12612209 spsK Staphylococcus pseudintermedius ED99 IgG-binding protein YP_006016513.1 2540586 D 984892 CDS YP_006016514.1 386320351 12612210 complement(2542130..2542939) 1 NC_017568.1 ABC transporter permease 2542939 12612210 SPSE_2470 Staphylococcus pseudintermedius ED99 ABC transporter permease YP_006016514.1 2542130 R 984892 CDS YP_006016515.1 386320352 12612211 complement(2542932..2543867) 1 NC_017568.1 identified by match to protein family HMM PF00005; ABC-type multidrug transport system, ATPase component 2543867 12612211 SPSE_2471 Staphylococcus pseudintermedius ED99 ABC-type multidrug transport system, ATPase component YP_006016515.1 2542932 R 984892 CDS YP_006016516.1 386320353 12612212 complement(2543946..2544065) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 2544065 12612212 SPSE_2472 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016516.1 2543946 R 984892 CDS YP_006016517.1 386320354 12612213 complement(2544022..2544246) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 2544246 12612213 SPSE_2473 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016517.1 2544022 R 984892 CDS YP_006016518.1 386320355 12612214 2545118..2545255 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 2545255 12612214 SPSE_2474 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016518.1 2545118 D 984892 CDS YP_006016519.1 386320356 12612215 2545257..2545679 1 NC_017568.1 hypothetical protein 2545679 12612215 SPSE_2475 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016519.1 2545257 D 984892 CDS YP_006016520.1 386320357 12612216 complement(2546110..2546271) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 2546271 12612216 SPSE_2476 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016520.1 2546110 R 984892 CDS YP_006016521.1 386320358 12612217 complement(2546436..2547533) 1 NC_017568.1 identified by match to protein family HMM PF01926, match to protein family HMM PF06071, match to protein family HMM TIGR00092; GTP-binding protein 2547533 12612217 SPSE_2477 Staphylococcus pseudintermedius ED99 GTP-binding protein YP_006016521.1 2546436 R 984892 CDS YP_006016522.1 386320359 12612218 complement(2547524..2547745) 1 NC_017568.1 identified by match to protein family HMM PF06107; hypothetical protein 2547745 12612218 SPSE_2478 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016522.1 2547524 R 984892 CDS YP_006016523.1 386320360 12612219 complement(2547758..2548648) 1 NC_017568.1 identified by match to protein family HMM PF00924; transporter, small conductance mechanosensitive ion channel (MscS) family 2548648 12612219 SPSE_2479 Staphylococcus pseudintermedius ED99 transporter, small conductance mechanosensitive ion channel (MscS) family YP_006016523.1 2547758 R 984892 CDS YP_006016524.1 386320361 12612220 complement(2548714..2549664) 1 NC_017568.1 identified by match to protein family HMM PF02195, match to protein family HMM TIGR00180; chromosome partioning protein, ParB family 2549664 12612220 SPSE_2480 Staphylococcus pseudintermedius ED99 chromosome partioning protein, ParB family YP_006016524.1 2548714 R 984892 CDS YP_006016525.1 386320362 12612221 2550102..2551214 1 NC_017568.1 identified by match to protein family HMM PF01053; cystathionine gamma-synthase 2551214 metB1 12612221 metB1 Staphylococcus pseudintermedius ED99 cystathionine gamma-synthase YP_006016525.1 2550102 D 984892 CDS YP_006016526.1 386320363 12612222 2551201..2552376 1 NC_017568.1 identified by match to protein family HMM PF01053, match to protein family HMM PF01212; cystathionine beta-lyase 2552376 metC 12612222 metC Staphylococcus pseudintermedius ED99 cystathionine beta-lyase YP_006016526.1 2551201 D 984892 CDS YP_006016527.1 386320364 12612223 2552330..2554171 1 NC_017568.1 identified by match to protein family HMM PF02219, match to protein family HMM PF02574; bifunctional; homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein 2554171 12612223 SPSE_2483 Staphylococcus pseudintermedius ED99 homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein YP_006016527.1 2552330 D 984892 CDS YP_006016528.1 386320365 12612224 2554168..2556408 1 NC_017568.1 identified by match to protein family HMM PF01717, match to protein family HMM PF08267, match to protein family HMM TIGR01371; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 2556408 metE 12612224 metE Staphylococcus pseudintermedius ED99 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase YP_006016528.1 2554168 D 984892 CDS YP_006016529.1 386320366 12612225 complement(2557093..2557926) 1 NC_017568.1 identified by match to protein family HMM PF01774; urease accessory protein UreD 2557926 ureD 12612225 ureD Staphylococcus pseudintermedius ED99 urease accessory protein UreD YP_006016529.1 2557093 R 984892 CDS YP_006016530.1 386320367 12612226 complement(2557926..2558537) 1 NC_017568.1 identified by match to protein family HMM PF02492, match to protein family HMM TIGR00101; urease accessory protein UreG 2558537 ureG 12612226 ureG Staphylococcus pseudintermedius ED99 urease accessory protein UreG YP_006016530.1 2557926 R 984892 CDS YP_006016531.1 386320368 12612227 complement(2558550..2559242) 1 NC_017568.1 identified by match to protein family HMM PF01730; urease accessory protein UreF 2559242 ureF 12612227 ureF Staphylococcus pseudintermedius ED99 urease accessory protein UreF YP_006016531.1 2558550 R 984892 CDS YP_006016532.1 386320369 12612228 complement(2559235..2559690) 1 NC_017568.1 identified by match to protein family HMM PF02814, match to protein family HMM PF05194; urease accessory protein UreE 2559690 ureE 12612228 ureE Staphylococcus pseudintermedius ED99 urease accessory protein UreE YP_006016532.1 2559235 R 984892 CDS YP_006016533.1 386320370 12612229 2560436..2561353 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 2561353 12612229 SPSE_2489 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016533.1 2560436 D 984892 CDS YP_006016534.1 386320371 12612230 complement(2561431..2561706) 1 NC_017568.1 putative acetyltransferase 2561706 12612230 SPSE_2490 Staphylococcus pseudintermedius ED99 putative acetyltransferase YP_006016534.1 2561431 R 984892 CDS YP_006016535.1 386320372 12612231 2561873..2562298 1 NC_017568.1 identified by match to protein family HMM PF01047, match to protein family HMM PF03965; MarR family transcriptional regulator 2562298 12612231 SPSE_2491 Staphylococcus pseudintermedius ED99 MarR family transcriptional regulator YP_006016535.1 2561873 D 984892 CDS YP_006016536.1 386320373 12612232 2562381..2563343 1 NC_017568.1 identified by match to protein family HMM PF00903; glyoxylase 2563343 12612232 SPSE_2492 Staphylococcus pseudintermedius ED99 glyoxylase YP_006016536.1 2562381 D 984892 CDS YP_006016537.1 386320374 12612233 2563389..2564006 1 NC_017568.1 hypothetical protein 2564006 12612233 SPSE_2493 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016537.1 2563389 D 984892 CDS YP_006016538.1 386320375 12612234 2564028..2564615 1 NC_017568.1 identified by match to protein family HMM PF02230; phospholipase/carboxylesterase family protein 2564615 12612234 SPSE_2494 Staphylococcus pseudintermedius ED99 phospholipase/carboxylesterase family protein YP_006016538.1 2564028 D 984892 CDS YP_006016539.1 386320376 12612235 complement(2564679..2565182) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 2565182 12612235 SPSE_2495 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016539.1 2564679 R 984892 CDS YP_006016540.1 386320377 12612236 complement(2565189..2565380) 1 NC_017568.1 identified by match to protein family HMM PF01381; transcriptional regulator 2565380 12612236 SPSE_2496 Staphylococcus pseudintermedius ED99 transcriptional regulator YP_006016540.1 2565189 R 984892 CDS YP_006016541.1 386320378 12612237 complement(2565527..2565841) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 2565841 12612237 SPSE_2497 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016541.1 2565527 R 984892 CDS YP_006016542.1 386320379 12612238 complement(2566052..2566186) 1 NC_017568.1 identified by Glimmer3, putative; hypothetical protein 2566186 12612238 SPSE_2498 Staphylococcus pseudintermedius ED99 hypothetical protein YP_006016542.1 2566052 R 984892 CDS YP_006016543.1 386320380 12612239 complement(2566480..2567331) 1 NC_017568.1 identified by match to protein family HMM PF02195, match to protein family HMM TIGR00180; chromosome partioning protein, ParB family 2567331 12612239 SPSE_2499 Staphylococcus pseudintermedius ED99 chromosome partioning protein, ParB family YP_006016543.1 2566480 R 984892 CDS YP_006016544.1 386320381 12612240 complement(2567369..2568088) 1 NC_017568.1 identified by match to protein family HMM PF02527, match to protein family HMM TIGR00138; 16S rRNA methyltransferase GidB 2568088 gidB 12612240 gidB Staphylococcus pseudintermedius ED99 16S rRNA methyltransferase GidB YP_006016544.1 2567369 R 984892 CDS YP_006016545.1 386320382 12612241 complement(2568089..2569963) 1 NC_017568.1 identified by match to protein family HMM PF01134, match to protein family HMM TIGR00136; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 2569963 gidA 12612241 gidA Staphylococcus pseudintermedius ED99 tRNA uridine 5-carboxymethylaminomethyl modification protein GidA YP_006016545.1 2568089 R 984892 CDS YP_006016546.1 386320383 12612242 complement(2569982..2571364) 1 NC_017568.1 identified by match to protein family HMM PF01926, match to protein family HMM TIGR00231, match to protein family HMM TIGR00450; tRNA modification GTPase TrmE 2571364 trmE 12612242 trmE Staphylococcus pseudintermedius ED99 tRNA modification GTPase TrmE YP_006016546.1 2569982 R 984892 CDS YP_006016547.1 386320384 12612243 complement(2571538..2571885) 1 NC_017568.1 identified by match to protein family HMM PF00825, match to protein family HMM TIGR00188; ribonuclease P protein component 2571885 rnpA 12612243 rnpA Staphylococcus pseudintermedius ED99 ribonuclease P protein component YP_006016547.1 2571538 R 984892 CDS YP_006016548.1 386320385 12612244 complement(2572059..2572196) 1 NC_017568.1 50S ribosomal protein L34 2572196 rpmH 12612244 rpmH Staphylococcus pseudintermedius ED99 50S ribosomal protein L34 YP_006016548.1 2572059 R 984892 CDS