-- dump date 20140620_072050 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 317655000001 SEQ_END SEQ_END NC_008036.1 28543 28543 DR NC_008036.1; contig end 28543..28543 Sphingopyxis alaskensis RB2256 317655000002 SEQ_END SEQ_END NC_008048.1 3345170 3345170 DR NC_008048.1; contig end 3345170..3345170 Sphingopyxis alaskensis RB2256 YP_611121.1 CDS Sala_3189 NC_008036.1 290 970 R hypothetical protein complement(290..970) Sphingopyxis alaskensis RB2256 4074355 YP_611122.1 CDS Sala_3190 NC_008036.1 1028 1795 R hypothetical protein complement(1028..1795) Sphingopyxis alaskensis RB2256 4074356 YP_611123.1 CDS Sala_3191 NC_008036.1 1803 4727 R MobA/MobL family protein; conjugal transfer relaxase TraA complement(1803..4727) Sphingopyxis alaskensis RB2256 4074357 YP_611124.1 CDS Sala_3192 NC_008036.1 4862 5167 D hypothetical protein 4862..5167 Sphingopyxis alaskensis RB2256 4074358 YP_611125.1 CDS Sala_3193 NC_008036.1 5145 5417 D conjugal transfer TraD 5145..5417 Sphingopyxis alaskensis RB2256 4074359 YP_611126.1 CDS Sala_3194 NC_008036.1 5726 6991 D uncharacterized membrane-anchored protein 5726..6991 Sphingopyxis alaskensis RB2256 4074360 YP_611127.1 CDS Sala_3195 NC_008036.1 7141 8589 D two component, sigma54 specific, Fis family transcriptional regulator 7141..8589 Sphingopyxis alaskensis RB2256 4074361 YP_611128.1 CDS Sala_3196 NC_008036.1 8592 8852 D hypothetical protein 8592..8852 Sphingopyxis alaskensis RB2256 4074362 YP_611129.1 CDS Sala_3197 NC_008036.1 9081 10043 D NADH ubiquinone oxidoreductase, 20 kDa subunit 9081..10043 Sphingopyxis alaskensis RB2256 4074335 YP_611130.1 CDS Sala_3198 NC_008036.1 10057 11700 D nickel-dependent hydrogenase, large subunit 10057..11700 Sphingopyxis alaskensis RB2256 4074336 YP_611131.1 CDS Sala_3199 NC_008036.1 11772 12170 D hypothetical protein 11772..12170 Sphingopyxis alaskensis RB2256 4074337 YP_611132.1 CDS Sala_3200 NC_008036.1 12143 12499 D hypothetical protein 12143..12499 Sphingopyxis alaskensis RB2256 4074338 YP_611133.1 CDS Sala_3201 NC_008036.1 12487 12972 D hydrogenase maturation protease 12487..12972 Sphingopyxis alaskensis RB2256 4074339 YP_611134.1 CDS Sala_3202 NC_008036.1 12976 13287 D hypothetical protein 12976..13287 Sphingopyxis alaskensis RB2256 4074340 YP_611135.1 CDS Sala_3203 NC_008036.1 13385 14383 D hypothetical protein 13385..14383 Sphingopyxis alaskensis RB2256 4074341 YP_611136.1 CDS Sala_3204 NC_008036.1 14390 14602 D hypothetical protein 14390..14602 Sphingopyxis alaskensis RB2256 4074342 YP_611137.1 CDS Sala_3205 NC_008036.1 14771 15706 D nitrogen-fixing NifU-like 14771..15706 Sphingopyxis alaskensis RB2256 4074343 YP_611138.1 CDS Sala_3206 NC_008036.1 15622 16881 D NHL repeat-containing protein 15622..16881 Sphingopyxis alaskensis RB2256 4074344 YP_611139.1 CDS Sala_3207 NC_008036.1 16863 19244 D (NiFe) hydrogenase maturation protein HypF 16863..19244 Sphingopyxis alaskensis RB2256 4074345 YP_611140.1 CDS Sala_3208 NC_008036.1 19235 19531 D hydrogenase assembly chaperone hypC/hupF 19235..19531 Sphingopyxis alaskensis RB2256 4074346 YP_611141.1 CDS Sala_3209 NC_008036.1 19525 20211 D phosphoheptose isomerase 19525..20211 Sphingopyxis alaskensis RB2256 4074347 YP_611142.1 CDS Sala_3210 NC_008036.1 20208 21341 D hydrogenase expression/formation protein HypD 20208..21341 Sphingopyxis alaskensis RB2256 4074348 YP_611143.1 CDS Sala_3211 NC_008036.1 21338 22387 D hydrogenase expression/formation protein HypE 21338..22387 Sphingopyxis alaskensis RB2256 4074349 YP_611144.1 CDS Sala_3212 NC_008036.1 22403 23122 D high-affinity nickel-transporter 22403..23122 Sphingopyxis alaskensis RB2256 4074350 YP_611145.1 CDS Sala_3213 NC_008036.1 23122 23364 D zinc finger protein 23122..23364 Sphingopyxis alaskensis RB2256 4074351 YP_611146.1 CDS Sala_3214 NC_008036.1 23364 24275 D hydrogenase accessory protein HypB 23364..24275 Sphingopyxis alaskensis RB2256 4074352 YP_611147.1 CDS Sala_3215 NC_008036.1 24263 24574 D hypothetical protein 24263..24574 Sphingopyxis alaskensis RB2256 4074353 YP_611148.1 CDS Sala_3216 NC_008036.1 24760 24966 D phage transcriptional regulator, AlpA 24760..24966 Sphingopyxis alaskensis RB2256 4074354 YP_611149.1 CDS Sala_3217 NC_008036.1 25814 26143 D hypothetical protein 25814..26143 Sphingopyxis alaskensis RB2256 4074333 YP_611150.1 CDS Sala_3218 NC_008036.1 26638 28125 R AMP-dependent synthetase and ligase complement(26638..28125) Sphingopyxis alaskensis RB2256 4074334 YP_615060.1 CDS dnaA NC_008048.1 173 1534 D binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 173..1534 Sphingopyxis alaskensis RB2256 4082956 YP_615061.1 CDS Sala_0002 NC_008048.1 1682 2353 R glutathione S-transferase-like protein complement(1682..2353) Sphingopyxis alaskensis RB2256 4082957 YP_615062.1 CDS engB NC_008048.1 2549 3208 R binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC complement(2549..3208) Sphingopyxis alaskensis RB2256 4083134 YP_615063.1 CDS Sala_0004 NC_008048.1 3205 4959 R functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; putative inner membrane protein translocase component YidC complement(3205..4959) Sphingopyxis alaskensis RB2256 4083135 YP_615064.1 CDS Sala_0005 NC_008048.1 5006 5218 R hypothetical protein complement(5006..5218) Sphingopyxis alaskensis RB2256 4083136 YP_615065.1 CDS Sala_0006 NC_008048.1 5439 6161 R ribonuclease P protein component complement(5439..6161) Sphingopyxis alaskensis RB2256 4083137 YP_615066.1 CDS Sala_0007 NC_008048.1 6361 6693 D entericidin EcnAB 6361..6693 Sphingopyxis alaskensis RB2256 4083138 YP_615067.1 CDS Sala_0008 NC_008048.1 6735 7511 R alpha/beta hydrolase complement(6735..7511) Sphingopyxis alaskensis RB2256 4083139 YP_615068.1 CDS Sala_0009 NC_008048.1 7591 8253 R glutathione S-transferase-like protein complement(7591..8253) Sphingopyxis alaskensis RB2256 4083140 YP_615069.1 CDS Sala_0010 NC_008048.1 8250 8702 R hypothetical protein complement(8250..8702) Sphingopyxis alaskensis RB2256 4083141 YP_615070.1 CDS Sala_0011 NC_008048.1 8689 9192 R 3-demethylubiquinone-9 3-methyltransferase complement(8689..9192) Sphingopyxis alaskensis RB2256 4083142 YP_615071.1 CDS Sala_0012 NC_008048.1 9228 10031 R glyoxalase/bleomycin resistance protein/dioxygenase complement(9228..10031) Sphingopyxis alaskensis RB2256 4083143 YP_615072.1 CDS Sala_0013 NC_008048.1 10071 10370 R hypothetical protein complement(10071..10370) Sphingopyxis alaskensis RB2256 4083144 YP_615073.1 CDS Sala_0014 NC_008048.1 10373 11044 R glutathione S-transferase-like protein complement(10373..11044) Sphingopyxis alaskensis RB2256 4083145 YP_615074.1 CDS Sala_0015 NC_008048.1 11093 11815 R hypothetical protein complement(11093..11815) Sphingopyxis alaskensis RB2256 4083146 YP_615075.1 CDS Sala_0016 NC_008048.1 11849 12523 R glutathione S-transferase-like protein complement(11849..12523) Sphingopyxis alaskensis RB2256 4083147 YP_615076.1 CDS Sala_0017 NC_008048.1 12546 13529 R alpha/beta hydrolase complement(12546..13529) Sphingopyxis alaskensis RB2256 4083148 YP_615077.1 CDS Sala_0018 NC_008048.1 13559 13777 R hypothetical protein complement(13559..13777) Sphingopyxis alaskensis RB2256 4083149 YP_615078.1 CDS Sala_0019 NC_008048.1 13851 14285 R glyoxalase/bleomycin resistance protein/dioxygenase complement(13851..14285) Sphingopyxis alaskensis RB2256 4083150 YP_615079.1 CDS Sala_0020 NC_008048.1 14357 15097 R TetR family transcriptional regulator complement(14357..15097) Sphingopyxis alaskensis RB2256 4083151 YP_615080.1 CDS Sala_0021 NC_008048.1 15206 16714 D Mg chelatase-like protein 15206..16714 Sphingopyxis alaskensis RB2256 4083152 YP_615081.1 CDS Sala_0022 NC_008048.1 16724 17023 D hypothetical protein 16724..17023 Sphingopyxis alaskensis RB2256 4083153 YP_615082.1 CDS Sala_0023 NC_008048.1 17078 18832 D diguanylate cyclase 17078..18832 Sphingopyxis alaskensis RB2256 4082210 YP_615083.1 CDS Sala_0024 NC_008048.1 18852 19247 R hypothetical protein complement(18852..19247) Sphingopyxis alaskensis RB2256 4082211 YP_615084.1 CDS Sala_0025 NC_008048.1 19249 20457 R peptidase M23B complement(19249..20457) Sphingopyxis alaskensis RB2256 4082212 YP_615085.1 CDS Sala_0026 NC_008048.1 20688 22094 D isoprenylcysteine carboxyl methyltransferase 20688..22094 Sphingopyxis alaskensis RB2256 4082213 YP_615086.1 CDS Sala_0027 NC_008048.1 22212 24476 R TonB-dependent receptor complement(22212..24476) Sphingopyxis alaskensis RB2256 4082214 YP_615087.1 CDS Sala_0028 NC_008048.1 24779 25867 R PepSY-associated TM helix family protein complement(24779..25867) Sphingopyxis alaskensis RB2256 4082215 YP_615088.1 CDS Sala_0029 NC_008048.1 25868 28018 R TonB-dependent receptor complement(25868..28018) Sphingopyxis alaskensis RB2256 4082216 YP_615089.1 CDS Sala_0030 NC_008048.1 28222 30534 D patatin 28222..30534 Sphingopyxis alaskensis RB2256 4082217 YP_615090.1 CDS Sala_0031 NC_008048.1 30847 31545 R ThiJ/PfpI complement(30847..31545) Sphingopyxis alaskensis RB2256 4082218 YP_615091.1 CDS Sala_0032 NC_008048.1 31966 32262 R entericidin EcnAB complement(31966..32262) Sphingopyxis alaskensis RB2256 4082219 YP_615092.1 CDS Sala_0033 NC_008048.1 32447 32764 R outer membrane protein complement(32447..32764) Sphingopyxis alaskensis RB2256 4082220 YP_615093.1 CDS Sala_0034 NC_008048.1 32993 33979 D ArsR family transcriptional regulator 32993..33979 Sphingopyxis alaskensis RB2256 4082221 YP_615094.1 CDS Sala_0035 NC_008048.1 33976 34914 D 5,10-methylenetetrahydrofolate reductase 33976..34914 Sphingopyxis alaskensis RB2256 4082222 YP_615095.1 CDS Sala_0036 NC_008048.1 34911 35978 D 5-methyltetrahydrofolate--homocysteine methyltransferase 34911..35978 Sphingopyxis alaskensis RB2256 4082223 YP_615096.1 CDS Sala_0037 NC_008048.1 36101 38722 D 5-methyltetrahydrofolate--homocysteine methyltransferase 36101..38722 Sphingopyxis alaskensis RB2256 4082224 YP_615097.1 CDS Sala_0038 NC_008048.1 38833 39786 D hypothetical protein 38833..39786 Sphingopyxis alaskensis RB2256 4082225 YP_615098.1 CDS Sala_0039 NC_008048.1 39789 40247 R hypothetical protein complement(39789..40247) Sphingopyxis alaskensis RB2256 4082226 YP_615099.1 CDS Sala_0040 NC_008048.1 40437 40757 R hypothetical protein complement(40437..40757) Sphingopyxis alaskensis RB2256 4082227 YP_615100.1 CDS Sala_0041 NC_008048.1 40793 41344 R TspO and MBR like proteins complement(40793..41344) Sphingopyxis alaskensis RB2256 4082228 YP_615101.1 CDS Sala_0042 NC_008048.1 41406 42146 R hemolysin A complement(41406..42146) Sphingopyxis alaskensis RB2256 4081535 YP_615102.1 CDS Sala_0043 NC_008048.1 42262 44322 R thiol:disulfide interchange protein complement(42262..44322) Sphingopyxis alaskensis RB2256 4081536 YP_615103.1 CDS Sala_0044 NC_008048.1 44414 46099 D type I phosphodiesterase/nucleotide pyrophosphatase 44414..46099 Sphingopyxis alaskensis RB2256 4081537 YP_615104.1 CDS Sala_0045 NC_008048.1 46087 46947 D pyrroline-5-carboxylate reductase 46087..46947 Sphingopyxis alaskensis RB2256 4081538 YP_615105.1 CDS Sala_0046 NC_008048.1 46964 47527 R MarR family transcriptional regulator complement(46964..47527) Sphingopyxis alaskensis RB2256 4081539 YP_615106.1 CDS Sala_0047 NC_008048.1 47553 48638 D catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 47553..48638 Sphingopyxis alaskensis RB2256 4081540 YP_615107.1 CDS Sala_0048 NC_008048.1 48884 50962 D phage integrase 48884..50962 Sphingopyxis alaskensis RB2256 4081542 YP_615108.1 CDS Sala_0049 NC_008048.1 51177 54644 R hypothetical protein complement(51177..54644) Sphingopyxis alaskensis RB2256 4081543 YP_615109.1 CDS Sala_0050 NC_008048.1 54644 55894 R metallophosphoesterase complement(54644..55894) Sphingopyxis alaskensis RB2256 4081544 YP_615110.1 CDS Sala_0051 NC_008048.1 55994 57361 R UBA/ThiF-type NAD/FAD binding fold containing protein complement(55994..57361) Sphingopyxis alaskensis RB2256 4081545 YP_615111.1 CDS Sala_0052 NC_008048.1 57375 57854 R hypothetical protein complement(57375..57854) Sphingopyxis alaskensis RB2256 4081546 YP_615112.1 CDS Sala_0053 NC_008048.1 57838 58296 R hypothetical protein complement(57838..58296) Sphingopyxis alaskensis RB2256 4081547 YP_615113.1 CDS Sala_0054 NC_008048.1 58298 58759 R hypothetical protein complement(58298..58759) Sphingopyxis alaskensis RB2256 4081548 YP_615114.1 CDS Sala_0055 NC_008048.1 58843 62181 R UvrD/REP helicase complement(58843..62181) Sphingopyxis alaskensis RB2256 4081549 YP_615115.1 CDS Sala_0056 NC_008048.1 62186 62770 R hypothetical protein complement(62186..62770) Sphingopyxis alaskensis RB2256 4081550 YP_615116.1 CDS Sala_0057 NC_008048.1 62767 63480 R ECF subfamily RNA polymerase sigma-24 factor complement(62767..63480) Sphingopyxis alaskensis RB2256 4081551 YP_615117.1 CDS Sala_0058 NC_008048.1 63977 64852 D hypothetical protein 63977..64852 Sphingopyxis alaskensis RB2256 4081552 YP_615118.1 CDS Sala_0059 NC_008048.1 65272 67644 D hypothetical protein 65272..67644 Sphingopyxis alaskensis RB2256 4081553 YP_615119.1 CDS Sala_0060 NC_008048.1 68024 69100 D amidohydrolase 2 68024..69100 Sphingopyxis alaskensis RB2256 4082133 YP_615120.1 CDS Sala_0061 NC_008048.1 69196 69759 D hypothetical protein 69196..69759 Sphingopyxis alaskensis RB2256 4082134 YP_615121.1 CDS Sala_0062 NC_008048.1 69756 70496 D hypothetical protein 69756..70496 Sphingopyxis alaskensis RB2256 4082135 YP_615122.1 CDS Sala_0063 NC_008048.1 70663 71181 D hypothetical protein 70663..71181 Sphingopyxis alaskensis RB2256 4082136 YP_615123.1 CDS Sala_0064 NC_008048.1 71489 72214 D hypothetical protein 71489..72214 Sphingopyxis alaskensis RB2256 4082137 YP_615124.1 CDS Sala_0065 NC_008048.1 72355 72810 D 17 kDa surface antigen 72355..72810 Sphingopyxis alaskensis RB2256 4082138 YP_615125.1 CDS Sala_0066 NC_008048.1 72897 73181 R hypothetical protein complement(72897..73181) Sphingopyxis alaskensis RB2256 4082139 YP_615126.1 CDS Sala_0067 NC_008048.1 73686 74876 R putative transposase complement(73686..74876) Sphingopyxis alaskensis RB2256 4082140 YP_615127.1 CDS Sala_0068 NC_008048.1 74882 75790 R phage integrase complement(74882..75790) Sphingopyxis alaskensis RB2256 4082141 YP_615128.1 CDS Sala_0069 NC_008048.1 75977 76849 R hypothetical protein complement(75977..76849) Sphingopyxis alaskensis RB2256 4082142 YP_615129.1 CDS Sala_0070 NC_008048.1 76846 77403 R hypothetical protein complement(76846..77403) Sphingopyxis alaskensis RB2256 4082143 YP_615130.1 CDS Sala_0071 NC_008048.1 77512 78048 D hypothetical protein 77512..78048 Sphingopyxis alaskensis RB2256 4082144 YP_615131.1 CDS Sala_0072 NC_008048.1 78229 79272 R beta-lactamase-like protein complement(78229..79272) Sphingopyxis alaskensis RB2256 4082145 YP_615132.1 CDS Sala_0073 NC_008048.1 79659 79934 R hypothetical protein complement(79659..79934) Sphingopyxis alaskensis RB2256 4082146 YP_615133.1 CDS Sala_0074 NC_008048.1 80291 81436 R thioredoxin-like protein complement(80291..81436) Sphingopyxis alaskensis RB2256 4082147 YP_615134.1 CDS Sala_0075 NC_008048.1 81527 82579 R twin-arginine translocation pathway signal complement(81527..82579) Sphingopyxis alaskensis RB2256 4082148 YP_615135.1 CDS Sala_0076 NC_008048.1 82625 83080 R hypothetical protein complement(82625..83080) Sphingopyxis alaskensis RB2256 4082149 YP_615136.1 CDS Sala_0077 NC_008048.1 83189 83740 R TetR family transcriptional regulator complement(83189..83740) Sphingopyxis alaskensis RB2256 4082150 YP_615137.1 CDS Sala_0078 NC_008048.1 83846 84697 D short-chain dehydrogenase/reductase SDR 83846..84697 Sphingopyxis alaskensis RB2256 4082151 YP_615138.1 CDS Sala_0079 NC_008048.1 84803 85024 R hypothetical protein complement(84803..85024) Sphingopyxis alaskensis RB2256 4082054 YP_615139.1 CDS Sala_0080 NC_008048.1 85075 85491 R OsmC-like protein complement(85075..85491) Sphingopyxis alaskensis RB2256 4082055 YP_615140.1 CDS Sala_0081 NC_008048.1 85527 86873 R epoxide hydrolase-like protein complement(85527..86873) Sphingopyxis alaskensis RB2256 4082056 YP_615141.1 CDS Sala_0082 NC_008048.1 86908 87717 R short-chain dehydrogenase/reductase SDR complement(86908..87717) Sphingopyxis alaskensis RB2256 4082057 YP_615142.1 CDS Sala_0083 NC_008048.1 87851 88753 R LysR family transcriptional regulator complement(87851..88753) Sphingopyxis alaskensis RB2256 4082058 YP_615143.1 CDS Sala_0084 NC_008048.1 89025 89618 R TetR family transcriptional regulator complement(89025..89618) Sphingopyxis alaskensis RB2256 4082059 YP_615144.1 CDS Sala_0085 NC_008048.1 89692 90405 D oxidoreductase 89692..90405 Sphingopyxis alaskensis RB2256 4082060 YP_615145.1 CDS Sala_0086 NC_008048.1 90499 90834 R hypothetical protein complement(90499..90834) Sphingopyxis alaskensis RB2256 4082061 YP_615146.1 CDS Sala_0087 NC_008048.1 90958 91749 R hypothetical protein complement(90958..91749) Sphingopyxis alaskensis RB2256 4082062 YP_615147.1 CDS Sala_0088 NC_008048.1 91752 92687 R hypothetical protein complement(91752..92687) Sphingopyxis alaskensis RB2256 4082063 YP_615148.1 CDS Sala_0089 NC_008048.1 93158 93844 D ribose 5-phosphate isomerase 93158..93844 Sphingopyxis alaskensis RB2256 4082064 YP_615149.1 CDS Sala_0090 NC_008048.1 94088 94663 D MarR family transcriptional regulator 94088..94663 Sphingopyxis alaskensis RB2256 4082065 YP_615150.1 CDS Sala_0091 NC_008048.1 94707 95270 R TetR family transcriptional regulator complement(94707..95270) Sphingopyxis alaskensis RB2256 4082066 YP_615151.1 CDS Sala_0092 NC_008048.1 95423 95848 D hypothetical protein 95423..95848 Sphingopyxis alaskensis RB2256 4082067 YP_615152.1 CDS Sala_0093 NC_008048.1 95841 96686 D NmrA-like protein 95841..96686 Sphingopyxis alaskensis RB2256 4082068 YP_615153.1 CDS Sala_0094 NC_008048.1 96726 97007 D hypothetical protein 96726..97007 Sphingopyxis alaskensis RB2256 4082069 YP_615154.1 CDS Sala_0095 NC_008048.1 97276 98235 D LysR family transcriptional regulator 97276..98235 Sphingopyxis alaskensis RB2256 4082070 YP_615155.1 CDS Sala_0097 NC_008048.1 99504 100208 D glutathione S-transferase-like protein 99504..100208 Sphingopyxis alaskensis RB2256 4082072 YP_615156.1 CDS Sala_0098 NC_008048.1 100205 101173 D Mg2+ transporter protein, CorA-like protein 100205..101173 Sphingopyxis alaskensis RB2256 4082073 YP_615157.1 CDS Sala_0099 NC_008048.1 101270 101842 D hypothetical protein 101270..101842 Sphingopyxis alaskensis RB2256 4082094 YP_615158.1 CDS Sala_0100 NC_008048.1 101928 102380 D hypothetical protein 101928..102380 Sphingopyxis alaskensis RB2256 4082095 YP_615159.1 CDS Sala_0101 NC_008048.1 102403 103683 R major facilitator superfamily transporter complement(102403..103683) Sphingopyxis alaskensis RB2256 4082096 YP_615160.1 CDS Sala_0102 NC_008048.1 103680 103928 R hypothetical protein complement(103680..103928) Sphingopyxis alaskensis RB2256 4082097 YP_615161.1 CDS Sala_0103 NC_008048.1 103932 104402 R hypothetical protein complement(103932..104402) Sphingopyxis alaskensis RB2256 4082098 YP_615162.1 CDS Sala_0104 NC_008048.1 104452 104742 R hypothetical protein complement(104452..104742) Sphingopyxis alaskensis RB2256 4082099 YP_615163.1 CDS Sala_0105 NC_008048.1 104813 105145 R hypothetical protein complement(104813..105145) Sphingopyxis alaskensis RB2256 4082100 YP_615164.1 CDS Sala_0106 NC_008048.1 105166 105597 R hypothetical protein complement(105166..105597) Sphingopyxis alaskensis RB2256 4082101 YP_615165.1 CDS Sala_0107 NC_008048.1 105651 106676 R zinc-binding alcohol dehydrogenase complement(105651..106676) Sphingopyxis alaskensis RB2256 4082102 YP_615166.1 CDS Sala_0108 NC_008048.1 107168 107773 D oxidoreductase, molybdopterin binding 107168..107773 Sphingopyxis alaskensis RB2256 4082103 YP_615167.1 CDS Sala_0109 NC_008048.1 107862 108512 D oxidoreductase FAD-binding region 107862..108512 Sphingopyxis alaskensis RB2256 4082104 YP_615168.1 CDS Sala_0110 NC_008048.1 108571 109836 D Acetyl-CoA C-acyltransferase 108571..109836 Sphingopyxis alaskensis RB2256 4082105 YP_615169.1 CDS Sala_0111 NC_008048.1 109889 110170 D hypothetical protein 109889..110170 Sphingopyxis alaskensis RB2256 4082106 YP_615170.1 CDS argS NC_008048.1 110198 111940 D catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 110198..111940 Sphingopyxis alaskensis RB2256 4082107 YP_615171.1 CDS Sala_0113 NC_008048.1 112032 112295 D hypothetical protein 112032..112295 Sphingopyxis alaskensis RB2256 4082108 YP_615172.1 CDS Sala_0114 NC_008048.1 112555 113532 D similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate; 6-phosphogluconate dehydrogenase 112555..113532 Sphingopyxis alaskensis RB2256 4082109 YP_615173.1 CDS Sala_0115 NC_008048.1 113771 114109 D hypothetical protein 113771..114109 Sphingopyxis alaskensis RB2256 4082110 YP_615174.1 CDS Sala_0117 NC_008048.1 114425 115027 D methionine sulfoxide reductase A 114425..115027 Sphingopyxis alaskensis RB2256 4082111 YP_615175.1 CDS Sala_0118 NC_008048.1 115024 116043 D beta-lactamase-like protein 115024..116043 Sphingopyxis alaskensis RB2256 4082112 YP_615176.1 CDS Sala_0119 NC_008048.1 116111 116647 D MarR family transcriptional regulator 116111..116647 Sphingopyxis alaskensis RB2256 4082267 YP_615177.1 CDS Sala_0120 NC_008048.1 116689 117183 D hypothetical protein 116689..117183 Sphingopyxis alaskensis RB2256 4082268 YP_615178.1 CDS Sala_0121 NC_008048.1 117462 118886 R Catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase complement(117462..118886) Sphingopyxis alaskensis RB2256 4082269 YP_615179.1 CDS Sala_0122 NC_008048.1 118968 119867 R hypothetical protein complement(118968..119867) Sphingopyxis alaskensis RB2256 4082270 YP_615180.1 CDS Sala_0123 NC_008048.1 119945 120850 R LysR family transcriptional regulator complement(119945..120850) Sphingopyxis alaskensis RB2256 4082271 YP_615181.1 CDS Sala_0124 NC_008048.1 121243 121896 D helix-turn-helix, Fis-type 121243..121896 Sphingopyxis alaskensis RB2256 4082272 YP_615182.1 CDS Sala_0125 NC_008048.1 121993 122436 D this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; methionine sulfoxide reductase B 121993..122436 Sphingopyxis alaskensis RB2256 4082273 YP_615183.1 CDS Sala_0126 NC_008048.1 122439 122954 D this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A 122439..122954 Sphingopyxis alaskensis RB2256 4082274 YP_615184.1 CDS Sala_0127 NC_008048.1 122968 123243 D glutaredoxin GrxC 122968..123243 Sphingopyxis alaskensis RB2256 4082275 YP_615185.1 CDS Sala_0128 NC_008048.1 123317 124228 R cation diffusion facilitator family transporter complement(123317..124228) Sphingopyxis alaskensis RB2256 4082276 YP_615186.1 CDS Sala_0129 NC_008048.1 124375 125004 R hypothetical protein complement(124375..125004) Sphingopyxis alaskensis RB2256 4082277 YP_615187.1 CDS Sala_0130 NC_008048.1 125193 125585 R endoribonuclease L-PSP complement(125193..125585) Sphingopyxis alaskensis RB2256 4082278 YP_615188.1 CDS Sala_0131 NC_008048.1 125745 126734 R cytochrome c, class I complement(125745..126734) Sphingopyxis alaskensis RB2256 4082279 YP_615189.1 CDS Sala_0132 NC_008048.1 126795 127478 R hypothetical protein complement(126795..127478) Sphingopyxis alaskensis RB2256 4082280 YP_615190.1 CDS Sala_0133 NC_008048.1 128017 128427 D hypothetical protein 128017..128427 Sphingopyxis alaskensis RB2256 4082281 YP_615191.1 CDS Sala_0134 NC_008048.1 128453 129115 R hypothetical protein complement(128453..129115) Sphingopyxis alaskensis RB2256 4082282 YP_615192.1 CDS Sala_0135 NC_008048.1 129305 129706 D hypothetical protein 129305..129706 Sphingopyxis alaskensis RB2256 4082283 YP_615193.1 CDS Sala_0136 NC_008048.1 130031 130900 D hypothetical protein 130031..130900 Sphingopyxis alaskensis RB2256 4082284 YP_615194.1 CDS Sala_0137 NC_008048.1 130887 131660 D hypothetical protein 130887..131660 Sphingopyxis alaskensis RB2256 4082285 YP_615195.1 CDS Sala_0138 NC_008048.1 131815 132669 R hypothetical protein complement(131815..132669) Sphingopyxis alaskensis RB2256 4082286 YP_615196.1 CDS Sala_0139 NC_008048.1 132709 132969 D hypothetical protein 132709..132969 Sphingopyxis alaskensis RB2256 4081809 YP_615197.1 CDS Sala_0140 NC_008048.1 133348 136752 D hypothetical protein 133348..136752 Sphingopyxis alaskensis RB2256 4081810 YP_615198.1 CDS Sala_0141 NC_008048.1 136971 137735 D hypothetical protein 136971..137735 Sphingopyxis alaskensis RB2256 4081811 YP_615199.1 CDS Sala_0142 NC_008048.1 138017 138661 D hypothetical protein 138017..138661 Sphingopyxis alaskensis RB2256 4081812 YP_615200.1 CDS Sala_0143 NC_008048.1 138781 139119 D hypothetical protein 138781..139119 Sphingopyxis alaskensis RB2256 4081813 YP_615201.1 CDS Sala_0144 NC_008048.1 139264 140049 R hypothetical protein complement(139264..140049) Sphingopyxis alaskensis RB2256 4081814 YP_615202.1 CDS Sala_0145 NC_008048.1 140728 141693 R thioredoxin reductase complement(140728..141693) Sphingopyxis alaskensis RB2256 4081815 YP_615203.1 CDS Sala_0146 NC_008048.1 141909 142535 D type 11 methyltransferase 141909..142535 Sphingopyxis alaskensis RB2256 4081816 YP_615204.1 CDS Sala_0147 NC_008048.1 142661 143389 R rhodanese-like protein complement(142661..143389) Sphingopyxis alaskensis RB2256 4081817 YP_615205.1 CDS Sala_0148 NC_008048.1 143693 144031 D nitrogen regulatory protein P-II 143693..144031 Sphingopyxis alaskensis RB2256 4081818 YP_615206.1 CDS Sala_0149 NC_008048.1 144103 145515 D glutamine synthetase, type I 144103..145515 Sphingopyxis alaskensis RB2256 4081819 YP_615207.1 CDS Sala_0150 NC_008048.1 145673 146149 D hypothetical protein 145673..146149 Sphingopyxis alaskensis RB2256 4081820 YP_615208.1 CDS Sala_0151 NC_008048.1 146162 146833 R hypothetical protein complement(146162..146833) Sphingopyxis alaskensis RB2256 4081821 YP_615209.1 CDS Sala_0152 NC_008048.1 146835 147116 R XRE family transcriptional regulator complement(146835..147116) Sphingopyxis alaskensis RB2256 4081822 YP_615210.1 CDS Sala_0153 NC_008048.1 147432 148898 D glucose/sorbosone dehydrogenase-like protein 147432..148898 Sphingopyxis alaskensis RB2256 4081823 YP_615211.1 CDS Sala_0154 NC_008048.1 149067 150500 D aldehyde dehydrogenase 149067..150500 Sphingopyxis alaskensis RB2256 4081824 YP_615212.1 CDS argJ NC_008048.1 150674 151900 D bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase 150674..151900 Sphingopyxis alaskensis RB2256 4081825 YP_615213.1 CDS Sala_0156 NC_008048.1 152009 152329 R thioredoxin complement(152009..152329) Sphingopyxis alaskensis RB2256 4081826 YP_615214.1 CDS Sala_0157 NC_008048.1 152363 155863 R UvrD/REP helicase complement(152363..155863) Sphingopyxis alaskensis RB2256 4081827 YP_615215.1 CDS Sala_0158 NC_008048.1 155860 158835 R helicase complement(155860..158835) Sphingopyxis alaskensis RB2256 4082916 YP_615216.1 CDS Sala_0159 NC_008048.1 158935 159654 R nucleotidyl transferase complement(158935..159654) Sphingopyxis alaskensis RB2256 4082917 YP_615217.1 CDS Sala_0160 NC_008048.1 159651 160622 R aminoglycoside phosphotransferase complement(159651..160622) Sphingopyxis alaskensis RB2256 4082918 YP_615218.1 CDS Sala_0161 NC_008048.1 160619 161113 R hypothetical protein complement(160619..161113) Sphingopyxis alaskensis RB2256 4082919 YP_615219.1 CDS Sala_0162 NC_008048.1 161199 163562 R PAS/PAC sensor signal transduction histidine kinase complement(161199..163562) Sphingopyxis alaskensis RB2256 4082920 YP_615220.1 CDS Sala_0163 NC_008048.1 163757 165175 R catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase complement(163757..165175) Sphingopyxis alaskensis RB2256 4082921 YP_615221.1 CDS Sala_0164 NC_008048.1 165576 165974 D hypothetical protein 165576..165974 Sphingopyxis alaskensis RB2256 4082922 YP_615222.1 CDS Sala_0165 NC_008048.1 166068 166712 R hypothetical protein complement(166068..166712) Sphingopyxis alaskensis RB2256 4082923 YP_615223.1 CDS Sala_0166 NC_008048.1 166953 167456 D alkyl hydroperoxide reductase 166953..167456 Sphingopyxis alaskensis RB2256 4082924 YP_615224.1 CDS Sala_0167 NC_008048.1 167576 169057 D Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile; AMP nucleosidase 167576..169057 Sphingopyxis alaskensis RB2256 4082925 YP_615225.1 CDS Sala_0168 NC_008048.1 169208 171547 D ATPase 169208..171547 Sphingopyxis alaskensis RB2256 4082926 YP_615226.1 CDS Sala_0169 NC_008048.1 171643 173307 R AMP-dependent synthetase and ligase complement(171643..173307) Sphingopyxis alaskensis RB2256 4082927 YP_615227.1 CDS Sala_0170 NC_008048.1 173440 173970 D hypothetical protein 173440..173970 Sphingopyxis alaskensis RB2256 4082928 YP_615228.1 CDS Sala_0171 NC_008048.1 174007 175845 D para-aminobenzoate synthase, component I 174007..175845 Sphingopyxis alaskensis RB2256 4082929 YP_615229.1 CDS Sala_0172 NC_008048.1 175960 177171 D class I and II aminotransferase 175960..177171 Sphingopyxis alaskensis RB2256 4082930 YP_615230.1 CDS Sala_0173 NC_008048.1 177591 178280 D this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A 177591..178280 Sphingopyxis alaskensis RB2256 4082931 YP_615231.1 CDS Sala_0174 NC_008048.1 178424 179590 D beta-lactamase 178424..179590 Sphingopyxis alaskensis RB2256 4082932 YP_615232.1 CDS Sala_0175 NC_008048.1 179598 179909 D hypothetical protein 179598..179909 Sphingopyxis alaskensis RB2256 4082933 YP_615233.1 CDS sucC NC_008048.1 179980 181260 D catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 179980..181260 Sphingopyxis alaskensis RB2256 4082934 YP_615234.1 CDS Sala_0177 NC_008048.1 181362 181634 D hypothetical protein 181362..181634 Sphingopyxis alaskensis RB2256 4082935 YP_615235.1 CDS Sala_0178 NC_008048.1 181761 182510 D electron transfer flavoprotein subunit beta 181761..182510 Sphingopyxis alaskensis RB2256 4082287 YP_615236.1 CDS Sala_0179 NC_008048.1 182622 183551 D electron transfer flavoprotein subunit alpha 182622..183551 Sphingopyxis alaskensis RB2256 4082288 YP_615237.1 CDS Sala_0180 NC_008048.1 183563 184933 D hypothetical protein 183563..184933 Sphingopyxis alaskensis RB2256 4082289 YP_615238.1 CDS Sala_0181 NC_008048.1 185217 187952 D TonB-dependent receptor 185217..187952 Sphingopyxis alaskensis RB2256 4082290 YP_615239.1 CDS Sala_0182 NC_008048.1 188026 189534 D tryptophan halogenase 188026..189534 Sphingopyxis alaskensis RB2256 4082291 YP_615240.1 CDS Sala_0183 NC_008048.1 189531 191333 D alpha amylase 189531..191333 Sphingopyxis alaskensis RB2256 4082292 YP_615241.1 CDS Sala_0184 NC_008048.1 191345 192988 D alpha amylase 191345..192988 Sphingopyxis alaskensis RB2256 4082293 YP_615242.1 CDS Sala_0185 NC_008048.1 192991 195033 D alpha-glucosidase 192991..195033 Sphingopyxis alaskensis RB2256 4082294 YP_615243.1 CDS Sala_0186 NC_008048.1 195234 197504 D oxidoreductase alpha (molybdopterin) subunit 195234..197504 Sphingopyxis alaskensis RB2256 4082295 YP_615244.1 CDS Sala_0187 NC_008048.1 197506 198018 R molybdopterin-guanine dinucleotide biosynthesis protein MobA complement(197506..198018) Sphingopyxis alaskensis RB2256 4082296 YP_615245.1 CDS Sala_0188 NC_008048.1 198015 198818 R formate dehydrogenase family accessory protein FdhD complement(198015..198818) Sphingopyxis alaskensis RB2256 4082297 YP_615246.1 CDS glpD NC_008048.1 198870 200369 R in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; glycerol-3-phosphate dehydrogenase complement(198870..200369) Sphingopyxis alaskensis RB2256 4082298 YP_615247.1 CDS Sala_0190 NC_008048.1 200525 202063 D catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 200525..202063 Sphingopyxis alaskensis RB2256 4082299 YP_615248.1 CDS Sala_0191 NC_008048.1 202109 204100 D catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate; phosphogluconate dehydratase 202109..204100 Sphingopyxis alaskensis RB2256 4082300 YP_615249.1 CDS Sala_0192 NC_008048.1 204199 204819 D 2-dehydro-3-deoxyphosphogluconate aldolase 204199..204819 Sphingopyxis alaskensis RB2256 4082301 YP_615250.1 CDS Sala_0193 NC_008048.1 204922 206478 D HAD family hydrolase 204922..206478 Sphingopyxis alaskensis RB2256 4082302 YP_615251.1 CDS Sala_0194 NC_008048.1 206601 208952 D PlsB; catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA; glycerol-3-phosphate acyltransferase 206601..208952 Sphingopyxis alaskensis RB2256 4082303 YP_615252.1 CDS Sala_0195 NC_008048.1 209034 210590 D hypothetical protein 209034..210590 Sphingopyxis alaskensis RB2256 4082304 YP_615253.1 CDS Sala_0196 NC_008048.1 210709 212157 D patatin 210709..212157 Sphingopyxis alaskensis RB2256 4082305 YP_615254.1 CDS Sala_0197 NC_008048.1 212154 213020 D acylglycerol lipase 212154..213020 Sphingopyxis alaskensis RB2256 4082113 YP_615255.1 CDS Sala_0198 NC_008048.1 213017 213952 D alpha/beta hydrolase 213017..213952 Sphingopyxis alaskensis RB2256 4082114 YP_615256.1 CDS gpsA NC_008048.1 214037 215038 D catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 214037..215038 Sphingopyxis alaskensis RB2256 4082115 YP_615257.1 CDS Sala_0200 NC_008048.1 215170 215739 R thioredoxin domain-containing protein complement(215170..215739) Sphingopyxis alaskensis RB2256 4082116 YP_615258.1 CDS Sala_0201 NC_008048.1 215765 217171 D argininosuccinate lyase 215765..217171 Sphingopyxis alaskensis RB2256 4082117 YP_615259.1 CDS Sala_0202 NC_008048.1 217171 217422 D hypothetical protein 217171..217422 Sphingopyxis alaskensis RB2256 4082118 YP_615260.1 CDS Sala_0203 NC_008048.1 217574 218833 D diaminopimelate decarboxylase 217574..218833 Sphingopyxis alaskensis RB2256 4082119 YP_615261.1 CDS Sala_0204 NC_008048.1 218984 219766 D siroheme synthase 218984..219766 Sphingopyxis alaskensis RB2256 4082120 YP_615262.1 CDS Sala_0205 NC_008048.1 219907 220932 R sigma-54 dependent trancsriptional regulator complement(219907..220932) Sphingopyxis alaskensis RB2256 4082121 YP_615263.1 CDS Sala_0206 NC_008048.1 221032 221277 D hypothetical protein 221032..221277 Sphingopyxis alaskensis RB2256 4082122 YP_615264.1 CDS Sala_0207 NC_008048.1 221379 222041 D phage shock protein A, PspA 221379..222041 Sphingopyxis alaskensis RB2256 4082123 YP_615265.1 CDS Sala_0208 NC_008048.1 222054 222329 D phage shock B 222054..222329 Sphingopyxis alaskensis RB2256 4082124 YP_615266.1 CDS Sala_0209 NC_008048.1 222331 222711 D phage shock protein C, PspC 222331..222711 Sphingopyxis alaskensis RB2256 4082125 YP_615267.1 CDS Sala_0210 NC_008048.1 222744 223043 D hypothetical protein 222744..223043 Sphingopyxis alaskensis RB2256 4082126 YP_615268.1 CDS Sala_0211 NC_008048.1 223052 223372 D hypothetical protein 223052..223372 Sphingopyxis alaskensis RB2256 4082127 YP_615269.1 CDS Sala_0212 NC_008048.1 223385 223648 D hypothetical protein 223385..223648 Sphingopyxis alaskensis RB2256 4082128 YP_615270.1 CDS Sala_0213 NC_008048.1 223681 223941 D hypothetical protein 223681..223941 Sphingopyxis alaskensis RB2256 4082129 YP_615271.1 CDS Sala_0214 NC_008048.1 223965 224210 D hypothetical protein 223965..224210 Sphingopyxis alaskensis RB2256 4082130 YP_615272.1 CDS Sala_0215 NC_008048.1 224369 224779 D Fe-S metabolism associated SufE 224369..224779 Sphingopyxis alaskensis RB2256 4082131 YP_615273.1 CDS Sala_0216 NC_008048.1 224784 226157 R hypothetical protein complement(224784..226157) Sphingopyxis alaskensis RB2256 4082132 YP_615274.1 CDS Sala_0217 NC_008048.1 226308 227210 D hypothetical protein 226308..227210 Sphingopyxis alaskensis RB2256 4082997 YP_615275.1 CDS Sala_0218 NC_008048.1 227230 227439 D hypothetical protein 227230..227439 Sphingopyxis alaskensis RB2256 4082998 YP_615276.1 CDS Sala_0219 NC_008048.1 227478 227720 D hypothetical protein 227478..227720 Sphingopyxis alaskensis RB2256 4082999 YP_615277.1 CDS Sala_0220 NC_008048.1 227943 229475 R AMP-dependent synthetase and ligase complement(227943..229475) Sphingopyxis alaskensis RB2256 4083000 YP_615278.1 CDS Sala_0221 NC_008048.1 229680 231212 D AMP-dependent synthetase and ligase 229680..231212 Sphingopyxis alaskensis RB2256 4083001 YP_615279.1 CDS Sala_0222 NC_008048.1 231217 231849 D DSBA oxidoreductase 231217..231849 Sphingopyxis alaskensis RB2256 4083002 YP_615280.1 CDS Sala_0223 NC_008048.1 231846 232649 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 231846..232649 Sphingopyxis alaskensis RB2256 4083003 YP_615281.1 CDS Sala_0224 NC_008048.1 232707 233657 D integrase catalytic subunit 232707..233657 Sphingopyxis alaskensis RB2256 4083004 YP_615282.1 CDS Sala_0225 NC_008048.1 233676 234170 R transposase, IS4 complement(233676..234170) Sphingopyxis alaskensis RB2256 4083005 YP_615283.1 CDS Sala_0226 NC_008048.1 234305 234520 D hypothetical protein 234305..234520 Sphingopyxis alaskensis RB2256 4083006 YP_615284.1 CDS Sala_0227 NC_008048.1 234774 236156 R hypothetical protein complement(234774..236156) Sphingopyxis alaskensis RB2256 4083007 YP_615285.1 CDS Sala_0228 NC_008048.1 236380 237585 D group 1 glycosyl transferase 236380..237585 Sphingopyxis alaskensis RB2256 4083008 YP_615286.1 CDS Sala_0229 NC_008048.1 237638 238447 D hypothetical protein 237638..238447 Sphingopyxis alaskensis RB2256 4083009 YP_615287.1 CDS Sala_0230 NC_008048.1 238516 238764 R hypothetical protein complement(238516..238764) Sphingopyxis alaskensis RB2256 4083010 YP_615288.1 CDS Sala_0231 NC_008048.1 238839 239060 R hypothetical protein complement(238839..239060) Sphingopyxis alaskensis RB2256 4083011 YP_615289.1 CDS Sala_0232 NC_008048.1 239198 239866 D putative phage repressor 239198..239866 Sphingopyxis alaskensis RB2256 4083012 YP_615290.1 CDS Sala_0233 NC_008048.1 239874 240182 R hypothetical protein complement(239874..240182) Sphingopyxis alaskensis RB2256 4083013 YP_615291.1 CDS Sala_0234 NC_008048.1 240430 241647 D methyl-accepting chemotaxis sensory transducer 240430..241647 Sphingopyxis alaskensis RB2256 4083014 YP_615292.1 CDS Sala_0235 NC_008048.1 241747 242472 D MIP family channel protein 241747..242472 Sphingopyxis alaskensis RB2256 4083015 YP_615293.1 CDS Sala_0236 NC_008048.1 242510 243373 R UTP-glucose-1-phosphate uridylyltransferase complement(242510..243373) Sphingopyxis alaskensis RB2256 4083095 YP_615294.1 CDS Sala_0237 NC_008048.1 243434 243946 R OmpA/MotB protein complement(243434..243946) Sphingopyxis alaskensis RB2256 4083096 YP_615295.1 CDS Sala_0238 NC_008048.1 243964 245190 R diguanylate cyclase complement(243964..245190) Sphingopyxis alaskensis RB2256 4083097 YP_615296.1 CDS Sala_0239 NC_008048.1 245187 245720 R hypothetical protein complement(245187..245720) Sphingopyxis alaskensis RB2256 4083098 YP_615297.1 CDS Sala_0240 NC_008048.1 245964 246497 R peptide methionine sulfoxide reductase complement(245964..246497) Sphingopyxis alaskensis RB2256 4083099 YP_615298.1 CDS Sala_0241 NC_008048.1 246555 247547 R peptidase M48, Ste24p complement(246555..247547) Sphingopyxis alaskensis RB2256 4083100 YP_615299.1 CDS Sala_0242 NC_008048.1 247661 248728 D cytochrome oxidase assembly 247661..248728 Sphingopyxis alaskensis RB2256 4083101 YP_615300.1 CDS rplM NC_008048.1 248893 249372 D in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 248893..249372 Sphingopyxis alaskensis RB2256 4083102 YP_615301.1 CDS rpsI NC_008048.1 249372 249869 D forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 249372..249869 Sphingopyxis alaskensis RB2256 4083103 YP_615302.1 CDS Sala_0245 NC_008048.1 249945 250763 R short-chain dehydrogenase/reductase SDR complement(249945..250763) Sphingopyxis alaskensis RB2256 4083104 YP_615303.1 CDS Sala_0247 NC_008048.1 251077 251604 D CarD family transcriptional regulator 251077..251604 Sphingopyxis alaskensis RB2256 4083105 YP_615304.1 CDS truA NC_008048.1 251833 252573 R mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A complement(251833..252573) Sphingopyxis alaskensis RB2256 4083106 YP_615305.1 CDS Sala_0249 NC_008048.1 252742 253662 R methionyl-tRNA formyltransferase complement(252742..253662) Sphingopyxis alaskensis RB2256 4083107 YP_615306.1 CDS recR NC_008048.1 253889 254485 D involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 253889..254485 Sphingopyxis alaskensis RB2256 4083108 YP_615307.1 CDS Sala_0251 NC_008048.1 254531 255073 D peptide deformylase 254531..255073 Sphingopyxis alaskensis RB2256 4083109 YP_615308.1 CDS Sala_0252 NC_008048.1 255275 255820 R GrpE protein HSP-70 cofactor complement(255275..255820) Sphingopyxis alaskensis RB2256 4083110 YP_615309.1 CDS hrcA NC_008048.1 255834 256877 R Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor complement(255834..256877) Sphingopyxis alaskensis RB2256 4083111 YP_615310.1 CDS rph NC_008048.1 256982 257698 D RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH 256982..257698 Sphingopyxis alaskensis RB2256 4083112 YP_615311.1 CDS Sala_0255 NC_008048.1 257743 258192 D hypothetical protein 257743..258192 Sphingopyxis alaskensis RB2256 4083113 YP_615312.1 CDS Sala_0256 NC_008048.1 258297 258668 D hypothetical protein 258297..258668 Sphingopyxis alaskensis RB2256 4083114 YP_615313.1 CDS Sala_0257 NC_008048.1 258677 259309 D HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; putative deoxyribonucleotide triphosphate pyrophosphatase 258677..259309 Sphingopyxis alaskensis RB2256 4081205 YP_615314.1 CDS Sala_0258 NC_008048.1 259318 260463 D catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 259318..260463 Sphingopyxis alaskensis RB2256 4081206 YP_615315.1 CDS Sala_0259 NC_008048.1 260564 261457 D phage integrase 260564..261457 Sphingopyxis alaskensis RB2256 4081207 YP_615316.1 CDS Sala_0260 NC_008048.1 261537 262145 R alkaline phosphatase-like protein complement(261537..262145) Sphingopyxis alaskensis RB2256 4081208 YP_615317.1 CDS Sala_0261 NC_008048.1 262302 263255 R catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase complement(262302..263255) Sphingopyxis alaskensis RB2256 4081209 YP_615318.1 CDS Sala_0262 NC_008048.1 263409 263759 R hypothetical protein complement(263409..263759) Sphingopyxis alaskensis RB2256 4081210 YP_615319.1 CDS Sala_0263 NC_008048.1 263756 264616 R hypothetical protein complement(263756..264616) Sphingopyxis alaskensis RB2256 4081211 YP_615320.1 CDS Sala_0264 NC_008048.1 264693 265829 D extracellular ligand-binding receptor 264693..265829 Sphingopyxis alaskensis RB2256 4081212 YP_615321.1 CDS infC NC_008048.1 266016 266537 D IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 266016..266537 Sphingopyxis alaskensis RB2256 4081213 YP_615322.1 CDS Sala_0266 NC_008048.1 266656 267354 R hypothetical protein complement(266656..267354) Sphingopyxis alaskensis RB2256 4081214 YP_615323.1 CDS Sala_0267 NC_008048.1 267452 268006 D hypothetical protein 267452..268006 Sphingopyxis alaskensis RB2256 4081215 YP_615324.1 CDS Sala_0268 NC_008048.1 268018 268626 D TetR family transcriptional regulator 268018..268626 Sphingopyxis alaskensis RB2256 4081216 YP_615325.1 CDS Sala_0269 NC_008048.1 268649 269086 D hypothetical protein 268649..269086 Sphingopyxis alaskensis RB2256 4081217 YP_615326.1 CDS Sala_0270 NC_008048.1 269295 270797 R peptidase S10, serine carboxypeptidase complement(269295..270797) Sphingopyxis alaskensis RB2256 4081218 YP_615327.1 CDS Sala_0271 NC_008048.1 270915 271136 R hypothetical protein complement(270915..271136) Sphingopyxis alaskensis RB2256 4081219 YP_615328.1 CDS Sala_0272 NC_008048.1 271136 271456 R XRE family plasmid maintenance system antidote protein complement(271136..271456) Sphingopyxis alaskensis RB2256 4081220 YP_615329.1 CDS Sala_0273 NC_008048.1 271425 271712 R plasmid maintenance system killer protein complement(271425..271712) Sphingopyxis alaskensis RB2256 4081221 YP_615330.1 CDS Sala_0274 NC_008048.1 271719 272333 R hypothetical protein complement(271719..272333) Sphingopyxis alaskensis RB2256 4081222 YP_615331.1 CDS Sala_0275 NC_008048.1 272384 274570 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B complement(272384..274570) Sphingopyxis alaskensis RB2256 4081223 YP_615332.1 CDS Sala_0276 NC_008048.1 274612 275166 D hypothetical protein 274612..275166 Sphingopyxis alaskensis RB2256 4082636 YP_615333.1 CDS Sala_0277 NC_008048.1 275245 275643 D glyoxalase/bleomycin resistance protein/dioxygenase 275245..275643 Sphingopyxis alaskensis RB2256 4082637 YP_615334.1 CDS Sala_0278 NC_008048.1 275731 276063 D hypothetical protein 275731..276063 Sphingopyxis alaskensis RB2256 4082638 YP_615335.1 CDS Sala_0279 NC_008048.1 276172 277917 D hypothetical protein 276172..277917 Sphingopyxis alaskensis RB2256 4082639 YP_615336.1 CDS acpP NC_008048.1 278152 278388 D carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 278152..278388 Sphingopyxis alaskensis RB2256 4082640 YP_615337.1 CDS Sala_0281 NC_008048.1 278556 279815 D beta-ketoacyl synthase 278556..279815 Sphingopyxis alaskensis RB2256 4082641 YP_615338.1 CDS Sala_0282 NC_008048.1 280014 280763 R hypothetical protein complement(280014..280763) Sphingopyxis alaskensis RB2256 4082642 YP_615339.1 CDS Sala_0283 NC_008048.1 280774 281907 R glucose sorbosone dehydrogenase complement(280774..281907) Sphingopyxis alaskensis RB2256 4082643 YP_615340.1 CDS Sala_0284 NC_008048.1 282062 282697 R ECF subfamily RNA polymerase sigma-24 factor complement(282062..282697) Sphingopyxis alaskensis RB2256 4082644 YP_615341.1 CDS Sala_0285 NC_008048.1 283107 283532 D hypothetical protein 283107..283532 Sphingopyxis alaskensis RB2256 4082645 YP_615342.1 CDS Sala_0286 NC_008048.1 283576 284211 D ECF subfamily RNA polymerase sigma-24 factor 283576..284211 Sphingopyxis alaskensis RB2256 4082646 YP_615343.1 CDS Sala_0287 NC_008048.1 284220 285014 R in Caulobacter crescentus, CC3477 is differentially expressed in minimal salts media with glucose as compared to complex media; two-component response regulator complement(284220..285014) Sphingopyxis alaskensis RB2256 4082647 YP_615344.1 CDS Sala_0288 NC_008048.1 285198 286742 D signal transduction histidine kinase 285198..286742 Sphingopyxis alaskensis RB2256 4082648 YP_615345.1 CDS Sala_0289 NC_008048.1 286755 287768 D putative mRNA 3-end processing factor 286755..287768 Sphingopyxis alaskensis RB2256 4082649 YP_615346.1 CDS Sala_0290 NC_008048.1 287765 289417 D catalyzes the ATP-dependent formation of a phosphodiester at the site of a single strand break in duplex DNA; ATP-dependent DNA ligase 287765..289417 Sphingopyxis alaskensis RB2256 4082650 YP_615347.1 CDS Sala_0291 NC_008048.1 289605 290231 D superoxide dismutase 289605..290231 Sphingopyxis alaskensis RB2256 4082651 YP_615348.1 CDS Sala_0292 NC_008048.1 290401 291780 D L-serine dehydratase 1 290401..291780 Sphingopyxis alaskensis RB2256 4082652 YP_615349.1 CDS Sala_0293 NC_008048.1 291790 292056 D hypothetical protein 291790..292056 Sphingopyxis alaskensis RB2256 4082653 YP_615350.1 CDS Sala_0294 NC_008048.1 292085 294085 R glucose-methanol-choline oxidoreductase complement(292085..294085) Sphingopyxis alaskensis RB2256 4082654 YP_615351.1 CDS Sala_0295 NC_008048.1 294188 295087 R cation diffusion facilitator family transporter complement(294188..295087) Sphingopyxis alaskensis RB2256 4082655 YP_615352.1 CDS Sala_0296 NC_008048.1 295097 295369 R hypothetical protein complement(295097..295369) Sphingopyxis alaskensis RB2256 4082859 YP_615353.1 CDS Sala_0297 NC_008048.1 295766 296542 D short-chain dehydrogenase/reductase SDR 295766..296542 Sphingopyxis alaskensis RB2256 4082860 YP_615354.1 CDS Sala_0298 NC_008048.1 296539 297327 D enoyl-CoA hydratase/isomerase 296539..297327 Sphingopyxis alaskensis RB2256 4082861 YP_615355.1 CDS Sala_0299 NC_008048.1 297402 299231 D sulfatase 297402..299231 Sphingopyxis alaskensis RB2256 4082862 YP_615356.1 CDS Sala_0300 NC_008048.1 299483 300412 R hypothetical protein complement(299483..300412) Sphingopyxis alaskensis RB2256 4082863 YP_615357.1 CDS Sala_0301 NC_008048.1 300409 301032 R TetR family transcriptional regulator complement(300409..301032) Sphingopyxis alaskensis RB2256 4082864 YP_615358.1 CDS Sala_0302 NC_008048.1 301155 302786 D sulfatase 301155..302786 Sphingopyxis alaskensis RB2256 4082865 YP_615359.1 CDS Sala_0303 NC_008048.1 302837 303844 D LacI family transcriptional regulator 302837..303844 Sphingopyxis alaskensis RB2256 4082866 YP_615360.1 CDS Sala_0304 NC_008048.1 303981 306941 D beta-phosphoglucomutase 303981..306941 Sphingopyxis alaskensis RB2256 4082867 YP_615361.1 CDS Sala_0305 NC_008048.1 306935 309295 D TonB-dependent receptor 306935..309295 Sphingopyxis alaskensis RB2256 4082868 YP_615362.1 CDS Sala_0306 NC_008048.1 309459 310688 D major facilitator superfamily transporter 309459..310688 Sphingopyxis alaskensis RB2256 4082869 YP_615363.1 CDS Sala_0307 NC_008048.1 311012 311851 D amidohydrolase 2 311012..311851 Sphingopyxis alaskensis RB2256 4082870 YP_615364.1 CDS Sala_0308 NC_008048.1 311952 313118 R iron-containing alcohol dehydrogenase complement(311952..313118) Sphingopyxis alaskensis RB2256 4082871 YP_615365.1 CDS Sala_0309 NC_008048.1 313173 314231 R putative lipoprotein signal peptide complement(313173..314231) Sphingopyxis alaskensis RB2256 4082872 YP_615366.1 CDS Sala_0310 NC_008048.1 314307 315344 R XRE family transcriptional regulator complement(314307..315344) Sphingopyxis alaskensis RB2256 4082873 YP_615367.1 CDS Sala_0311 NC_008048.1 315471 316313 D XRE family transcriptional regulator 315471..316313 Sphingopyxis alaskensis RB2256 4082874 YP_615368.1 CDS Sala_0312 NC_008048.1 316747 318324 D hypothetical protein 316747..318324 Sphingopyxis alaskensis RB2256 4082876 YP_615369.1 CDS Sala_0313 NC_008048.1 318409 321102 D TonB-dependent receptor 318409..321102 Sphingopyxis alaskensis RB2256 4082344 YP_615370.1 CDS Sala_0314 NC_008048.1 321266 322132 D type II secretion system protein C 321266..322132 Sphingopyxis alaskensis RB2256 4082345 YP_615371.1 CDS Sala_0315 NC_008048.1 322138 324336 D type II and III secretion system protein 322138..324336 Sphingopyxis alaskensis RB2256 4082346 YP_615372.1 CDS Sala_0316 NC_008048.1 324333 325826 D type II secretion system protein E 324333..325826 Sphingopyxis alaskensis RB2256 4082347 YP_615373.1 CDS Sala_0317 NC_008048.1 325819 327036 D general secretion pathway protein F 325819..327036 Sphingopyxis alaskensis RB2256 4082348 YP_615374.1 CDS Sala_0318 NC_008048.1 327040 327531 D general secretion pathway protein G 327040..327531 Sphingopyxis alaskensis RB2256 4082349 YP_615375.1 CDS Sala_0319 NC_008048.1 327506 327994 D general secretion pathway protein H 327506..327994 Sphingopyxis alaskensis RB2256 4082350 YP_615376.1 CDS Sala_0320 NC_008048.1 327984 328361 D general secretion pathway protein I 327984..328361 Sphingopyxis alaskensis RB2256 4082351 YP_615377.1 CDS Sala_0321 NC_008048.1 328358 328969 D general secretion pathway protein J 328358..328969 Sphingopyxis alaskensis RB2256 4082352 YP_615378.1 CDS Sala_0322 NC_008048.1 328966 329970 D general secretion pathway protein K 328966..329970 Sphingopyxis alaskensis RB2256 4082353 YP_615379.1 CDS Sala_0323 NC_008048.1 329984 331117 D general secretion pathway L 329984..331117 Sphingopyxis alaskensis RB2256 4082354 YP_615380.1 CDS Sala_0324 NC_008048.1 331114 331596 D hypothetical protein 331114..331596 Sphingopyxis alaskensis RB2256 4082355 YP_615381.1 CDS Sala_0325 NC_008048.1 331593 332309 D type II secretion system protein N 331593..332309 Sphingopyxis alaskensis RB2256 4082356 YP_615382.1 CDS Sala_0326 NC_008048.1 332423 333205 D peptidase A24A, prepilin type IV 332423..333205 Sphingopyxis alaskensis RB2256 4082357 YP_615383.1 CDS Sala_0327 NC_008048.1 333192 333704 R OmpA/MotB protein complement(333192..333704) Sphingopyxis alaskensis RB2256 4082358 YP_615384.1 CDS tolB NC_008048.1 333811 335175 R forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB complement(333811..335175) Sphingopyxis alaskensis RB2256 4082359 YP_615385.1 CDS Sala_0329 NC_008048.1 335181 336002 R hypothetical protein complement(335181..336002) Sphingopyxis alaskensis RB2256 4082360 YP_615386.1 CDS Sala_0330 NC_008048.1 336012 336533 R biopolymer transport protein ExbD/TolR complement(336012..336533) Sphingopyxis alaskensis RB2256 4082361 YP_615387.1 CDS Sala_0331 NC_008048.1 336533 337231 R MotA/TolQ/ExbB proton channel complement(336533..337231) Sphingopyxis alaskensis RB2256 4082362 YP_615388.1 CDS Sala_0332 NC_008048.1 337225 337704 R 4-hydroxybenzoyl-CoA thioesterase complement(337225..337704) Sphingopyxis alaskensis RB2256 4082363 YP_615389.1 CDS ruvB NC_008048.1 337887 338903 R promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB complement(337887..338903) Sphingopyxis alaskensis RB2256 4081031 YP_615390.1 CDS Sala_0334 NC_008048.1 339108 339512 R glutathione-dependent formaldehyde-activating protein complement(339108..339512) Sphingopyxis alaskensis RB2256 4081032 YP_615391.1 CDS ruvA NC_008048.1 339509 340108 R plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA complement(339509..340108) Sphingopyxis alaskensis RB2256 4081033 YP_615392.1 CDS ruvC NC_008048.1 340421 340891 R endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase complement(340421..340891) Sphingopyxis alaskensis RB2256 4081034 YP_615393.1 CDS Sala_0337 NC_008048.1 341031 341777 R hypothetical protein complement(341031..341777) Sphingopyxis alaskensis RB2256 4081035 YP_615394.1 CDS Sala_0338 NC_008048.1 341949 342266 R hypothetical protein complement(341949..342266) Sphingopyxis alaskensis RB2256 4081036 YP_615395.1 CDS Sala_0339 NC_008048.1 342320 342562 R hypothetical protein complement(342320..342562) Sphingopyxis alaskensis RB2256 4081037 YP_615396.1 CDS Sala_0340 NC_008048.1 342618 342947 R hypothetical protein complement(342618..342947) Sphingopyxis alaskensis RB2256 4081038 YP_615397.1 CDS Sala_0341 NC_008048.1 343046 344500 D pyruvate kinase 343046..344500 Sphingopyxis alaskensis RB2256 4081039 YP_615398.1 CDS Sala_0342 NC_008048.1 344728 345501 D Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; arginyl-tRNA-protein transferase 344728..345501 Sphingopyxis alaskensis RB2256 4081040 YP_615399.1 CDS Sala_0343 NC_008048.1 345792 348227 D cyclic nucleotide-binding protein 345792..348227 Sphingopyxis alaskensis RB2256 4081041 YP_615400.1 CDS Sala_0344 NC_008048.1 348227 349108 D hypothetical protein 348227..349108 Sphingopyxis alaskensis RB2256 4081042 YP_615401.1 CDS Sala_0345 NC_008048.1 349119 351053 D hypothetical protein 349119..351053 Sphingopyxis alaskensis RB2256 4081043 YP_615402.1 CDS Sala_0346 NC_008048.1 351095 351943 D metallophosphoesterase 351095..351943 Sphingopyxis alaskensis RB2256 4081044 YP_615403.1 CDS Sala_0347 NC_008048.1 352006 352950 R D-isomer specific 2-hydroxyacid dehydrogenase complement(352006..352950) Sphingopyxis alaskensis RB2256 4081045 YP_615404.1 CDS Sala_0348 NC_008048.1 352947 353393 R hypothetical protein complement(352947..353393) Sphingopyxis alaskensis RB2256 4081046 YP_615405.1 CDS Sala_0349 NC_008048.1 353461 355044 R cysteinyl-tRNA synthetase complement(353461..355044) Sphingopyxis alaskensis RB2256 4081047 YP_615406.1 CDS Sala_0350 NC_008048.1 355082 361354 R hypothetical protein complement(355082..361354) Sphingopyxis alaskensis RB2256 4081048 YP_615407.1 CDS Sala_0351 NC_008048.1 361358 363181 R hemolysin activation/secretion protein-like protein complement(361358..363181) Sphingopyxis alaskensis RB2256 4081049 YP_615408.1 CDS Sala_0352 NC_008048.1 363365 364129 R hypothetical protein complement(363365..364129) Sphingopyxis alaskensis RB2256 4081224 YP_615409.1 CDS Sala_0353 NC_008048.1 364116 366215 R adenylate/guanylate cyclase complement(364116..366215) Sphingopyxis alaskensis RB2256 4081225 YP_615410.1 CDS Sala_0354 NC_008048.1 366220 369297 R hypothetical protein complement(366220..369297) Sphingopyxis alaskensis RB2256 4081226 YP_615411.1 CDS Sala_0355 NC_008048.1 369519 369845 D hypothetical protein 369519..369845 Sphingopyxis alaskensis RB2256 4081227 YP_615412.1 CDS Sala_0356 NC_008048.1 369856 370089 D BolA-like protein 369856..370089 Sphingopyxis alaskensis RB2256 4081228 YP_615413.1 CDS Sala_0357 NC_008048.1 370140 370472 D glutaredoxin-like protein 370140..370472 Sphingopyxis alaskensis RB2256 4081229 YP_615414.1 CDS Sala_0358 NC_008048.1 370540 370914 R 17 kDa surface antigen complement(370540..370914) Sphingopyxis alaskensis RB2256 4081230 YP_615415.1 CDS Sala_0359 NC_008048.1 371373 371741 D CopY family transcriptional regulator 371373..371741 Sphingopyxis alaskensis RB2256 4081231 YP_615416.1 CDS Sala_0360 NC_008048.1 371738 373411 D peptidase M56, BlaR1 371738..373411 Sphingopyxis alaskensis RB2256 4081232 YP_615417.1 CDS Sala_0361 NC_008048.1 373691 374611 D beta-lactamase-like protein 373691..374611 Sphingopyxis alaskensis RB2256 4081233 YP_615418.1 CDS Sala_0362 NC_008048.1 374608 375207 D hypothetical protein 374608..375207 Sphingopyxis alaskensis RB2256 4081234 YP_615419.1 CDS Sala_0363 NC_008048.1 375224 375421 R hypothetical protein complement(375224..375421) Sphingopyxis alaskensis RB2256 4081235 YP_615420.1 CDS Sala_0364 NC_008048.1 375523 376521 D zinc-binding alcohol dehydrogenase 375523..376521 Sphingopyxis alaskensis RB2256 4081236 YP_615421.1 CDS Sala_0365 NC_008048.1 376582 377292 R ACP phosphodiesterase complement(376582..377292) Sphingopyxis alaskensis RB2256 4081237 YP_615422.1 CDS Sala_0366 NC_008048.1 377378 378283 D LysR family transcriptional regulator 377378..378283 Sphingopyxis alaskensis RB2256 4081238 YP_615423.1 CDS Sala_0367 NC_008048.1 378392 379054 D hypothetical protein 378392..379054 Sphingopyxis alaskensis RB2256 4081239 YP_615424.1 CDS Sala_0368 NC_008048.1 379182 380306 D beta-lactamase-like protein 379182..380306 Sphingopyxis alaskensis RB2256 4081240 YP_615425.1 CDS Sala_0369 NC_008048.1 380313 381038 R hypothetical protein complement(380313..381038) Sphingopyxis alaskensis RB2256 4081241 YP_615426.1 CDS Sala_0370 NC_008048.1 381679 382677 D hypothetical protein 381679..382677 Sphingopyxis alaskensis RB2256 4081242 YP_615427.1 CDS Sala_0371 NC_008048.1 382830 383288 R glyoxalase/bleomycin resistance protein/dioxygenase complement(382830..383288) Sphingopyxis alaskensis RB2256 4081243 YP_615428.1 CDS Sala_0372 NC_008048.1 383285 384829 R twin-arginine translocation pathway signal complement(383285..384829) Sphingopyxis alaskensis RB2256 4081959 YP_615429.1 CDS Sala_0373 NC_008048.1 385276 386121 D short-chain dehydrogenase/reductase SDR 385276..386121 Sphingopyxis alaskensis RB2256 4081960 YP_615430.1 CDS Sala_0374 NC_008048.1 386090 387613 R tartrate/fumarate subfamily Fe-S type hydro-lyase subunit alpha complement(386090..387613) Sphingopyxis alaskensis RB2256 4081961 YP_615431.1 CDS Sala_0375 NC_008048.1 387785 388240 D hypothetical protein 387785..388240 Sphingopyxis alaskensis RB2256 4081962 YP_615432.1 CDS Sala_0376 NC_008048.1 388342 388806 D ferric uptake regulator family protein 388342..388806 Sphingopyxis alaskensis RB2256 4081963 YP_615433.1 CDS Sala_0377 NC_008048.1 388838 389599 D hypothetical protein 388838..389599 Sphingopyxis alaskensis RB2256 4081964 YP_615434.1 CDS Sala_0378 NC_008048.1 389645 390484 D methionine aminopeptidase 389645..390484 Sphingopyxis alaskensis RB2256 4081965 YP_615435.1 CDS Sala_0379 NC_008048.1 390686 392869 D Pyrrolo-quinoline quinone 390686..392869 Sphingopyxis alaskensis RB2256 4081966 YP_615436.1 CDS Sala_0380 NC_008048.1 393186 393380 R hypothetical protein complement(393186..393380) Sphingopyxis alaskensis RB2256 4081967 YP_615437.1 CDS Sala_0381 NC_008048.1 393767 394336 D integrase catalytic subunit 393767..394336 Sphingopyxis alaskensis RB2256 4081968 YP_615438.1 CDS Sala_0382 NC_008048.1 394545 395678 D peptidase S1 and S6, chymotrypsin/Hap 394545..395678 Sphingopyxis alaskensis RB2256 4081969 YP_615439.1 CDS Sala_0383 NC_008048.1 395730 396230 R heat shock protein Hsp20 complement(395730..396230) Sphingopyxis alaskensis RB2256 4081970 YP_615440.1 CDS Sala_0384 NC_008048.1 396334 396843 R heat shock protein Hsp20 complement(396334..396843) Sphingopyxis alaskensis RB2256 4081971 YP_615441.1 CDS Sala_0385 NC_008048.1 397236 398333 D hypothetical protein 397236..398333 Sphingopyxis alaskensis RB2256 4081972 YP_615442.1 CDS Sala_0386 NC_008048.1 398363 399766 D phospholipase D/transphosphatidylase 398363..399766 Sphingopyxis alaskensis RB2256 4081973 YP_615443.1 CDS Sala_0387 NC_008048.1 399785 401482 D sodium/hydrogen exchanger 399785..401482 Sphingopyxis alaskensis RB2256 4081974 YP_615444.1 CDS Sala_0388 NC_008048.1 401535 402176 R hypothetical protein complement(401535..402176) Sphingopyxis alaskensis RB2256 4081975 YP_615445.1 CDS Sala_0389 NC_008048.1 402315 402815 R heat shock protein Hsp20 complement(402315..402815) Sphingopyxis alaskensis RB2256 4081976 YP_615446.1 CDS Sala_0390 NC_008048.1 402828 403220 R heat shock protein Hsp20 complement(402828..403220) Sphingopyxis alaskensis RB2256 4081977 YP_615447.1 CDS Sala_0391 NC_008048.1 403230 403655 R heat shock protein Hsp20 complement(403230..403655) Sphingopyxis alaskensis RB2256 4081711 YP_615448.1 CDS Sala_0393 NC_008048.1 404253 404468 D transposase (class IV) 404253..404468 Sphingopyxis alaskensis RB2256 4081712 YP_615449.1 CDS Sala_0394 NC_008048.1 404489 405199 D cyclic nucleotide-binding protein 404489..405199 Sphingopyxis alaskensis RB2256 4081713 YP_615450.1 CDS Sala_0395 NC_008048.1 405475 405960 D Ferritin and Dps 405475..405960 Sphingopyxis alaskensis RB2256 4081714 YP_615451.1 CDS Sala_0396 NC_008048.1 406261 407373 D transposase IS116/IS110/IS902 406261..407373 Sphingopyxis alaskensis RB2256 4081715 YP_615452.1 CDS Sala_0397 NC_008048.1 407422 407781 D transposase IS3/IS911 407422..407781 Sphingopyxis alaskensis RB2256 4081716 YP_615453.1 CDS Sala_0398 NC_008048.1 407787 408224 D IS66 Orf2 like 407787..408224 Sphingopyxis alaskensis RB2256 4081717 YP_615454.1 CDS Sala_0399 NC_008048.1 408303 409688 D transposase IS66 408303..409688 Sphingopyxis alaskensis RB2256 4081718 YP_615455.1 CDS Sala_0400 NC_008048.1 409685 409858 D transposase and inactivated derivative 409685..409858 Sphingopyxis alaskensis RB2256 4081719 YP_615456.1 CDS Sala_0401 NC_008048.1 410461 410997 R GrpE protein HSP-70 cofactor complement(410461..410997) Sphingopyxis alaskensis RB2256 4081720 YP_615457.1 CDS dnaK NC_008048.1 411015 412946 R heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK complement(411015..412946) Sphingopyxis alaskensis RB2256 4081721 YP_615458.1 CDS Sala_0403 NC_008048.1 413007 413822 R histidine kinase complement(413007..413822) Sphingopyxis alaskensis RB2256 4081722 YP_615459.1 CDS Sala_0404 NC_008048.1 413875 414807 R heat shock protein DnaJ-like protein complement(413875..414807) Sphingopyxis alaskensis RB2256 4081723 YP_615460.1 CDS Sala_0405 NC_008048.1 414851 415291 R thioredoxin complement(414851..415291) Sphingopyxis alaskensis RB2256 4081724 YP_615461.1 CDS Sala_0406 NC_008048.1 415330 417918 R ATPase complement(415330..417918) Sphingopyxis alaskensis RB2256 4081725 YP_615462.1 CDS Sala_0407 NC_008048.1 418042 418392 R transposase, IS4 complement(418042..418392) Sphingopyxis alaskensis RB2256 4081726 YP_615463.1 CDS Sala_0408 NC_008048.1 418721 419134 D hypothetical protein 418721..419134 Sphingopyxis alaskensis RB2256 4081727 YP_615464.1 CDS Sala_0409 NC_008048.1 419189 420106 D hypothetical protein 419189..420106 Sphingopyxis alaskensis RB2256 4081728 YP_615465.1 CDS Sala_0410 NC_008048.1 420204 420824 D hypothetical protein 420204..420824 Sphingopyxis alaskensis RB2256 4081729 YP_615466.1 CDS Sala_0411 NC_008048.1 420935 421555 D hypothetical protein 420935..421555 Sphingopyxis alaskensis RB2256 4081730 YP_615467.1 CDS Sala_0412 NC_008048.1 421590 422132 D hypothetical protein 421590..422132 Sphingopyxis alaskensis RB2256 4082364 YP_615468.1 CDS Sala_0414 NC_008048.1 423120 423605 D hypothetical protein 423120..423605 Sphingopyxis alaskensis RB2256 4082366 YP_615469.1 CDS Sala_0415 NC_008048.1 423702 423857 R chaperonin GroEL complement(423702..423857) Sphingopyxis alaskensis RB2256 4082367 YP_615470.1 CDS Sala_0416 NC_008048.1 424080 424355 D transposase IS3/IS911 424080..424355 Sphingopyxis alaskensis RB2256 4082368 YP_615471.1 CDS Sala_0417 NC_008048.1 424434 425963 D integrase catalytic subunit 424434..425963 Sphingopyxis alaskensis RB2256 4082369 YP_615472.1 CDS Sala_0418 NC_008048.1 425953 426720 D IstB-like ATP-binding protein 425953..426720 Sphingopyxis alaskensis RB2256 4082370 YP_615473.1 CDS Sala_0419 NC_008048.1 426817 427104 R hypothetical protein complement(426817..427104) Sphingopyxis alaskensis RB2256 4082371 YP_615474.1 CDS Sala_0420 NC_008048.1 427812 428060 R hypothetical protein complement(427812..428060) Sphingopyxis alaskensis RB2256 4082372 YP_615475.1 CDS Sala_0421 NC_008048.1 428472 428840 D hypothetical protein 428472..428840 Sphingopyxis alaskensis RB2256 4082373 YP_615476.1 CDS Sala_0422 NC_008048.1 428957 429379 R single-strand binding protein complement(428957..429379) Sphingopyxis alaskensis RB2256 4082374 YP_615477.1 CDS Sala_0423 NC_008048.1 429651 430079 R hypothetical protein complement(429651..430079) Sphingopyxis alaskensis RB2256 4082375 YP_615478.1 CDS Sala_0424 NC_008048.1 430090 430551 R hypothetical protein complement(430090..430551) Sphingopyxis alaskensis RB2256 4082376 YP_615479.1 CDS Sala_0425 NC_008048.1 430674 431627 R hypothetical protein complement(430674..431627) Sphingopyxis alaskensis RB2256 4082377 YP_615480.1 CDS Sala_0426 NC_008048.1 431930 432352 R hypothetical protein complement(431930..432352) Sphingopyxis alaskensis RB2256 4082378 YP_615481.1 CDS Sala_0427 NC_008048.1 432364 433305 R antirestriction protein complement(432364..433305) Sphingopyxis alaskensis RB2256 4082379 YP_615482.1 CDS Sala_0428 NC_008048.1 433473 435461 R parB-like partition proteins complement(433473..435461) Sphingopyxis alaskensis RB2256 4082380 YP_615483.1 CDS Sala_0429 NC_008048.1 435883 436536 D hypothetical protein 435883..436536 Sphingopyxis alaskensis RB2256 4082381 YP_615484.1 CDS Sala_0430 NC_008048.1 436533 438461 D hypothetical protein 436533..438461 Sphingopyxis alaskensis RB2256 4082382 YP_615485.1 CDS Sala_0431 NC_008048.1 438445 440391 D hypothetical protein 438445..440391 Sphingopyxis alaskensis RB2256 4082978 YP_615486.1 CDS Sala_0432 NC_008048.1 440845 441573 R IstB-like ATP-binding protein complement(440845..441573) Sphingopyxis alaskensis RB2256 4082979 YP_615487.1 CDS Sala_0433 NC_008048.1 441560 443074 R integrase catalytic subunit complement(441560..443074) Sphingopyxis alaskensis RB2256 4082980 YP_615488.1 CDS Sala_0434 NC_008048.1 443253 443660 D hypothetical protein 443253..443660 Sphingopyxis alaskensis RB2256 4082981 YP_615489.1 CDS Sala_0435 NC_008048.1 443726 444460 R hypothetical protein complement(443726..444460) Sphingopyxis alaskensis RB2256 4082982 YP_615490.1 CDS Sala_0436 NC_008048.1 444457 444870 R hypothetical protein complement(444457..444870) Sphingopyxis alaskensis RB2256 4082983 YP_615491.1 CDS Sala_0437 NC_008048.1 444934 446769 R putative methylase/helicase complement(444934..446769) Sphingopyxis alaskensis RB2256 4082984 YP_615492.1 CDS Sala_0438 NC_008048.1 446826 448373 D phage integrase 446826..448373 Sphingopyxis alaskensis RB2256 4082985 YP_615493.1 CDS Sala_0439 NC_008048.1 448367 449281 D phage integrase 448367..449281 Sphingopyxis alaskensis RB2256 4082986 YP_615494.1 CDS Sala_0440 NC_008048.1 449278 450282 D phage integrase 449278..450282 Sphingopyxis alaskensis RB2256 4082987 YP_615495.1 CDS Sala_0441 NC_008048.1 450421 452895 R putative methylase/helicase complement(450421..452895) Sphingopyxis alaskensis RB2256 4082988 YP_615496.1 CDS Sala_0442 NC_008048.1 452936 453865 R virulence-associated protein E complement(452936..453865) Sphingopyxis alaskensis RB2256 4082989 YP_615497.1 CDS Sala_0443 NC_008048.1 453990 454646 D lytic transglycosylase, catalytic 453990..454646 Sphingopyxis alaskensis RB2256 4082990 YP_615498.1 CDS Sala_0444 NC_008048.1 454701 455954 R phage integrase complement(454701..455954) Sphingopyxis alaskensis RB2256 4082991 YP_615499.1 CDS Sala_0445 NC_008048.1 456270 456875 R hypothetical protein complement(456270..456875) Sphingopyxis alaskensis RB2256 4082993 YP_615500.1 CDS Sala_0446 NC_008048.1 456968 457726 R alpha/beta hydrolase complement(456968..457726) Sphingopyxis alaskensis RB2256 4082994 YP_615501.1 CDS Sala_0447 NC_008048.1 457723 458871 R hypothetical protein complement(457723..458871) Sphingopyxis alaskensis RB2256 4082995 YP_615502.1 CDS Sala_0448 NC_008048.1 458901 459839 R aminodeoxychorismate lyase complement(458901..459839) Sphingopyxis alaskensis RB2256 4082996 YP_615503.1 CDS Sala_0449 NC_008048.1 459925 460227 D hypothetical protein 459925..460227 Sphingopyxis alaskensis RB2256 4080938 YP_615504.1 CDS Sala_0450 NC_008048.1 460587 462050 D TonB-dependent receptor, plug 460587..462050 Sphingopyxis alaskensis RB2256 4080939 YP_615505.1 CDS Sala_0451 NC_008048.1 462047 462814 R glutamine cyclotransferase complement(462047..462814) Sphingopyxis alaskensis RB2256 4080940 YP_615506.1 CDS groEL NC_008048.1 463029 464672 R 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is not essential for growth; chaperonin GroEL complement(463029..464672) Sphingopyxis alaskensis RB2256 4080941 YP_615507.1 CDS Sala_0453 NC_008048.1 464759 465046 R chaperonin Cpn10 complement(464759..465046) Sphingopyxis alaskensis RB2256 4080942 YP_615508.1 CDS Sala_0454 NC_008048.1 465182 466615 R MATE efflux family protein complement(465182..466615) Sphingopyxis alaskensis RB2256 4080943 YP_615509.1 CDS Sala_0455 NC_008048.1 466957 467709 D alpha/beta hydrolase 466957..467709 Sphingopyxis alaskensis RB2256 4080944 YP_615510.1 CDS Sala_0456 NC_008048.1 467931 469769 D peptidyl-dipeptidase A 467931..469769 Sphingopyxis alaskensis RB2256 4080945 YP_615511.1 CDS Sala_0457 NC_008048.1 470045 470326 R ArsR family transcriptional regulator complement(470045..470326) Sphingopyxis alaskensis RB2256 4080946 YP_615512.1 CDS Sala_0458 NC_008048.1 470427 470909 D hypothetical protein 470427..470909 Sphingopyxis alaskensis RB2256 4080947 YP_615513.1 CDS Sala_0459 NC_008048.1 471043 471864 D hypothetical protein 471043..471864 Sphingopyxis alaskensis RB2256 4080948 YP_615514.1 CDS Sala_0460 NC_008048.1 471874 472134 R hypothetical protein complement(471874..472134) Sphingopyxis alaskensis RB2256 4080949 YP_615515.1 CDS Sala_0461 NC_008048.1 472246 473724 D ATPase 472246..473724 Sphingopyxis alaskensis RB2256 4080950 YP_615516.1 CDS Sala_0462 NC_008048.1 473876 474244 R type IV pilus assembly PilZ complement(473876..474244) Sphingopyxis alaskensis RB2256 4080951 YP_615517.1 CDS lysK NC_008048.1 474351 475952 D class I; LysRS1; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri this enzyme charges both tRNA molecules for lysine that exist in this organism (but the tRNALysUUU very poorly) and in the presence of LysRS2 can charge tRNAPyl with lysine; lysyl-tRNA synthetase 474351..475952 Sphingopyxis alaskensis RB2256 4080952 YP_615518.1 CDS Sala_0464 NC_008048.1 475999 476481 D asparaginase 475999..476481 Sphingopyxis alaskensis RB2256 4080953 YP_615519.1 CDS Sala_0465 NC_008048.1 476482 477513 R fatty acid desaturase complement(476482..477513) Sphingopyxis alaskensis RB2256 4080954 YP_615520.1 CDS Sala_0466 NC_008048.1 477662 480298 D PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 477662..480298 Sphingopyxis alaskensis RB2256 4080955 YP_615521.1 CDS Sala_0467 NC_008048.1 480514 481503 D 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 480514..481503 Sphingopyxis alaskensis RB2256 4080956 YP_615522.1 CDS Sala_0468 NC_008048.1 481594 481986 R hypothetical protein complement(481594..481986) Sphingopyxis alaskensis RB2256 4080516 YP_615523.1 CDS Sala_0469 NC_008048.1 482465 482731 D transglycosylase-associated protein 482465..482731 Sphingopyxis alaskensis RB2256 4080517 YP_615524.1 CDS Sala_0470 NC_008048.1 482855 483127 D transglycosylase-associated protein 482855..483127 Sphingopyxis alaskensis RB2256 4080518 YP_615525.1 CDS Sala_0471 NC_008048.1 483394 484608 D secretion protein HlyD 483394..484608 Sphingopyxis alaskensis RB2256 4080519 YP_615526.1 CDS Sala_0472 NC_008048.1 484650 488066 D acriflavin resistance protein 484650..488066 Sphingopyxis alaskensis RB2256 4080520 YP_615527.1 CDS Sala_0473 NC_008048.1 488139 489404 D hypothetical protein 488139..489404 Sphingopyxis alaskensis RB2256 4080521 YP_615528.1 CDS Sala_0474 NC_008048.1 489401 490189 R NAD-dependent epimerase/dehydratase complement(489401..490189) Sphingopyxis alaskensis RB2256 4080522 YP_615529.1 CDS pepN NC_008048.1 490236 492830 D aminopeptidase N 490236..492830 Sphingopyxis alaskensis RB2256 4080523 YP_615530.1 CDS Sala_0476 NC_008048.1 492990 493310 R small multidrug resistance protein complement(492990..493310) Sphingopyxis alaskensis RB2256 4080524 YP_615531.1 CDS Sala_0477 NC_008048.1 493422 494192 R twin-arginine translocation pathway signal complement(493422..494192) Sphingopyxis alaskensis RB2256 4080525 YP_615532.1 CDS Sala_0478 NC_008048.1 494439 495038 R hypothetical protein complement(494439..495038) Sphingopyxis alaskensis RB2256 4080526 YP_615533.1 CDS Sala_0479 NC_008048.1 495047 495988 R hypothetical protein complement(495047..495988) Sphingopyxis alaskensis RB2256 4080527 YP_615534.1 CDS Sala_0480 NC_008048.1 495988 496866 R ABC transporter complement(495988..496866) Sphingopyxis alaskensis RB2256 4080528 YP_615535.1 CDS Sala_0481 NC_008048.1 496866 497972 R hypothetical protein complement(496866..497972) Sphingopyxis alaskensis RB2256 4080529 YP_615536.1 CDS Sala_0482 NC_008048.1 498075 498794 D HAD family hydrolase 498075..498794 Sphingopyxis alaskensis RB2256 4080530 YP_615537.1 CDS Sala_0483 NC_008048.1 499052 500344 R catalyzes the formation of methanethiol and 2-ocobutanoate from L-methionine; methionine gamma-lyase complement(499052..500344) Sphingopyxis alaskensis RB2256 4080531 YP_615538.1 CDS Sala_0484 NC_008048.1 500415 501821 R anion transporter complement(500415..501821) Sphingopyxis alaskensis RB2256 4080532 YP_615539.1 CDS Sala_0485 NC_008048.1 501941 502702 R hypothetical protein complement(501941..502702) Sphingopyxis alaskensis RB2256 4080533 YP_615540.1 CDS Sala_0486 NC_008048.1 502699 503217 R N-acetyltransferase GCN5 complement(502699..503217) Sphingopyxis alaskensis RB2256 4080534 YP_615541.1 CDS Sala_0487 NC_008048.1 503214 504284 R hypothetical protein complement(503214..504284) Sphingopyxis alaskensis RB2256 4080535 YP_615542.1 CDS Sala_0488 NC_008048.1 504271 505146 R transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase complement(504271..505146) Sphingopyxis alaskensis RB2256 4081378 YP_615543.1 CDS Sala_0489 NC_008048.1 505224 506933 D AMP-dependent synthetase and ligase 505224..506933 Sphingopyxis alaskensis RB2256 4081379 YP_615544.1 CDS Sala_0490 NC_008048.1 506982 507839 D hypothetical protein 506982..507839 Sphingopyxis alaskensis RB2256 4081380 YP_615545.1 CDS Sala_0491 NC_008048.1 507836 508606 D oxidoreductase, molybdopterin binding 507836..508606 Sphingopyxis alaskensis RB2256 4081381 YP_615546.1 CDS Sala_0492 NC_008048.1 508634 509920 D cyclopropane-fatty-acyl-phospholipid synthase 508634..509920 Sphingopyxis alaskensis RB2256 4081382 YP_615547.1 CDS Sala_0493 NC_008048.1 509925 510362 R hypothetical protein complement(509925..510362) Sphingopyxis alaskensis RB2256 4081383 YP_615548.1 CDS Sala_0494 NC_008048.1 510391 512457 R hypothetical protein complement(510391..512457) Sphingopyxis alaskensis RB2256 4081384 YP_615549.1 CDS Sala_0495 NC_008048.1 512621 513838 D catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 512621..513838 Sphingopyxis alaskensis RB2256 4081385 YP_615550.1 CDS Sala_0496 NC_008048.1 513849 514859 D threonine aldolase 513849..514859 Sphingopyxis alaskensis RB2256 4081386 YP_615551.1 CDS Sala_0497 NC_008048.1 514856 515815 D hypothetical protein 514856..515815 Sphingopyxis alaskensis RB2256 4081387 YP_615552.1 CDS Sala_0498 NC_008048.1 515862 517142 D hypothetical protein 515862..517142 Sphingopyxis alaskensis RB2256 4081388 YP_615553.1 CDS Sala_0499 NC_008048.1 517129 518412 R adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(517129..518412) Sphingopyxis alaskensis RB2256 4081389 YP_615554.1 CDS Sala_0500 NC_008048.1 518704 519309 R DSBA oxidoreductase complement(518704..519309) Sphingopyxis alaskensis RB2256 4081390 YP_615555.1 CDS Sala_0501 NC_008048.1 519303 520034 R short-chain dehydrogenase/reductase SDR complement(519303..520034) Sphingopyxis alaskensis RB2256 4081391 YP_615556.1 CDS Sala_0502 NC_008048.1 520101 520604 D HxlR family transcriptional regulator 520101..520604 Sphingopyxis alaskensis RB2256 4081392 YP_615557.1 CDS Sala_0503 NC_008048.1 520607 520972 R ATP-dependent Clp protease adaptor protein ClpS complement(520607..520972) Sphingopyxis alaskensis RB2256 4081393 YP_615558.1 CDS Sala_0504 NC_008048.1 521166 521912 R phasin complement(521166..521912) Sphingopyxis alaskensis RB2256 4081394 YP_615559.1 CDS Sala_0505 NC_008048.1 522038 523810 R Poly(R)-hydroxyalkanoic acid synthase, class I complement(522038..523810) Sphingopyxis alaskensis RB2256 4081395 YP_615560.1 CDS Sala_0506 NC_008048.1 523927 525147 D aminotransferase 523927..525147 Sphingopyxis alaskensis RB2256 4081396 YP_615561.1 CDS Sala_0507 NC_008048.1 525148 525630 D hypothetical protein 525148..525630 Sphingopyxis alaskensis RB2256 4081397 YP_615562.1 CDS Sala_0508 NC_008048.1 525790 527106 D major facilitator superfamily transporter 525790..527106 Sphingopyxis alaskensis RB2256 4081398 YP_615563.1 CDS Sala_0509 NC_008048.1 527209 527799 R NADPH-dependent FMN reductase complement(527209..527799) Sphingopyxis alaskensis RB2256 4081399 YP_615564.1 CDS Sala_0510 NC_008048.1 527847 529136 R catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase complement(527847..529136) Sphingopyxis alaskensis RB2256 4081400 YP_615565.1 CDS Sala_0511 NC_008048.1 529271 530215 D LipQ 529271..530215 Sphingopyxis alaskensis RB2256 4081401 YP_615566.1 CDS Sala_0512 NC_008048.1 530372 531061 R glutathione S-transferase-like protein complement(530372..531061) Sphingopyxis alaskensis RB2256 4081402 YP_615567.1 CDS Sala_0513 NC_008048.1 531064 531351 R chorismate mutase complement(531064..531351) Sphingopyxis alaskensis RB2256 4081403 YP_615568.1 CDS Sala_0514 NC_008048.1 531457 532470 D trans-hexaprenyltranstransferase 531457..532470 Sphingopyxis alaskensis RB2256 4081404 YP_615569.1 CDS Sala_0515 NC_008048.1 532490 532867 D hypothetical protein 532490..532867 Sphingopyxis alaskensis RB2256 4081405 YP_615570.1 CDS Sala_0516 NC_008048.1 532864 535332 D ATP-dependent helicase HrpB 532864..535332 Sphingopyxis alaskensis RB2256 4081406 YP_615571.1 CDS Sala_0517 NC_008048.1 535398 535676 D ETC complex I subunit region 535398..535676 Sphingopyxis alaskensis RB2256 4081407 YP_615572.1 CDS Sala_0518 NC_008048.1 535836 536051 R hypothetical protein complement(535836..536051) Sphingopyxis alaskensis RB2256 4081408 YP_615573.1 CDS Sala_0519 NC_008048.1 536131 536487 R hypothetical protein complement(536131..536487) Sphingopyxis alaskensis RB2256 4081409 YP_615574.1 CDS Sala_0520 NC_008048.1 536471 536854 R hypothetical protein complement(536471..536854) Sphingopyxis alaskensis RB2256 4081410 YP_615575.1 CDS Sala_0521 NC_008048.1 536854 537303 R hypothetical protein complement(536854..537303) Sphingopyxis alaskensis RB2256 4081411 YP_615576.1 CDS Sala_0522 NC_008048.1 537311 537901 R hypothetical protein complement(537311..537901) Sphingopyxis alaskensis RB2256 4081412 YP_615577.1 CDS eno NC_008048.1 538057 539331 D enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 538057..539331 Sphingopyxis alaskensis RB2256 4081413 YP_615578.1 CDS Sala_0524 NC_008048.1 539401 539724 D septum formation initiator 539401..539724 Sphingopyxis alaskensis RB2256 4081414 YP_615579.1 CDS Sala_0525 NC_008048.1 539985 541055 D pyruvate dehydrogenase (lipoamide) 539985..541055 Sphingopyxis alaskensis RB2256 4081415 YP_615580.1 CDS Sala_0526 NC_008048.1 541057 542457 D catalyzes the oxidative decarboxylation of pyruvate with concomitant acetylation of a lipoic acid-containing dihydrolipoamide acetyltransferase within the complex. The E1 component of the pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase(E2) and lipoamide dehydrogenase; pyruvate dehydrogenase subunit beta 541057..542457 Sphingopyxis alaskensis RB2256 4081416 YP_615581.1 CDS Sala_0527 NC_008048.1 542505 543173 D hypothetical protein 542505..543173 Sphingopyxis alaskensis RB2256 4081417 YP_615582.1 CDS Sala_0528 NC_008048.1 543258 543974 D Serine O-acetyltransferase 543258..543974 Sphingopyxis alaskensis RB2256 4081418 YP_615583.1 CDS Sala_0529 NC_008048.1 543974 544321 D hypothetical protein 543974..544321 Sphingopyxis alaskensis RB2256 4081419 YP_615584.1 CDS Sala_0530 NC_008048.1 544299 545363 R hypothetical protein complement(544299..545363) Sphingopyxis alaskensis RB2256 4081420 YP_615585.1 CDS Sala_0531 NC_008048.1 545637 546539 R short-chain dehydrogenase/reductase SDR complement(545637..546539) Sphingopyxis alaskensis RB2256 4081421 YP_615586.1 CDS Sala_0532 NC_008048.1 546739 548091 D phosphate-selective porin O and P 546739..548091 Sphingopyxis alaskensis RB2256 4081422 YP_615587.1 CDS Sala_0533 NC_008048.1 548107 549528 R hypothetical protein complement(548107..549528) Sphingopyxis alaskensis RB2256 4081423 YP_615588.1 CDS Sala_0534 NC_008048.1 549935 550342 R hypothetical protein complement(549935..550342) Sphingopyxis alaskensis RB2256 4081424 YP_615589.1 CDS Sala_0535 NC_008048.1 550335 550820 R hypothetical protein complement(550335..550820) Sphingopyxis alaskensis RB2256 4081425 YP_615590.1 CDS Sala_0536 NC_008048.1 550902 551333 D BadM/Rrf2 family transcriptional regulator 550902..551333 Sphingopyxis alaskensis RB2256 4081426 YP_615591.1 CDS Sala_0537 NC_008048.1 551353 552942 R AbgT transporter complement(551353..552942) Sphingopyxis alaskensis RB2256 4081427 YP_615592.1 CDS Sala_0538 NC_008048.1 553000 553593 D catalyzes the formation of thymidine 5'-phosphate from thymidine; thymidine kinase 553000..553593 Sphingopyxis alaskensis RB2256 4081428 YP_615593.1 CDS Sala_0539 NC_008048.1 553586 554122 D N-acetyltransferase GCN5 553586..554122 Sphingopyxis alaskensis RB2256 4081429 YP_615594.1 CDS Sala_0540 NC_008048.1 554154 554615 D hypothetical protein 554154..554615 Sphingopyxis alaskensis RB2256 4081430 YP_615595.1 CDS Sala_0541 NC_008048.1 554649 555605 D tRNA pseudouridine synthase B 554649..555605 Sphingopyxis alaskensis RB2256 4081431 YP_615596.1 CDS rpsO NC_008048.1 555631 555900 D primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 555631..555900 Sphingopyxis alaskensis RB2256 4081432 YP_615597.1 CDS Sala_0543 NC_008048.1 556093 558408 D polynucleotide phosphorylase/polyadenylase 556093..558408 Sphingopyxis alaskensis RB2256 4081433 YP_615598.1 CDS Sala_0544 NC_008048.1 558688 559392 D cyclophilin type peptidyl-prolyl cis-trans isomerase 558688..559392 Sphingopyxis alaskensis RB2256 4081434 YP_615599.1 CDS Sala_0545 NC_008048.1 559479 560273 D DNA uptake lipoprotein 559479..560273 Sphingopyxis alaskensis RB2256 4081435 YP_615600.1 CDS Sala_0546 NC_008048.1 560306 561976 D DNA repair protein RecN 560306..561976 Sphingopyxis alaskensis RB2256 4081436 YP_615601.1 CDS Sala_0547 NC_008048.1 561973 562659 D N-acetyltransferase GCN5 561973..562659 Sphingopyxis alaskensis RB2256 4081437 YP_615602.1 CDS Sala_0548 NC_008048.1 562791 563105 D hypothetical protein 562791..563105 Sphingopyxis alaskensis RB2256 4081438 YP_615603.1 CDS Sala_0549 NC_008048.1 563107 565251 D NAD-dependent DNA ligase 563107..565251 Sphingopyxis alaskensis RB2256 4081439 YP_615604.1 CDS Sala_0550 NC_008048.1 565595 566359 D molybdenum ABC transporter periplasmic molybdate-binding protein 565595..566359 Sphingopyxis alaskensis RB2256 4081440 YP_615605.1 CDS Sala_0551 NC_008048.1 566359 567054 D molybdate ABC transporter permease 566359..567054 Sphingopyxis alaskensis RB2256 4081441 YP_615606.1 CDS Sala_0552 NC_008048.1 567044 567664 D ABC transporter 567044..567664 Sphingopyxis alaskensis RB2256 4081442 YP_615607.1 CDS phhA NC_008048.1 567703 568572 D phenylalanine 4-hydroxylase; phenylalanine 4-hydroxylase; catalyzes the formation of 4a-hydroxytetrahydrobiopterin and tyrosine from phenylalanine and tetrahydrobiopterin; phenylalanine 4-monooxygenase 567703..568572 Sphingopyxis alaskensis RB2256 4081443 YP_615608.1 CDS Sala_0554 NC_008048.1 568678 569649 R ribosomal L11 methyltransferase complement(568678..569649) Sphingopyxis alaskensis RB2256 4081444 YP_615609.1 CDS Sala_0555 NC_008048.1 569650 570342 R short-chain dehydrogenase/reductase SDR complement(569650..570342) Sphingopyxis alaskensis RB2256 4081445 YP_615610.1 CDS Sala_0556 NC_008048.1 570490 571842 R methyl-accepting chemotaxis sensory transducer complement(570490..571842) Sphingopyxis alaskensis RB2256 4081446 YP_615611.1 CDS Sala_0557 NC_008048.1 571943 572410 R AsnC family transcriptional regulator complement(571943..572410) Sphingopyxis alaskensis RB2256 4081447 YP_615612.1 CDS Sala_0558 NC_008048.1 572566 573681 D alanine dehydrogenase 572566..573681 Sphingopyxis alaskensis RB2256 4081448 YP_615613.1 CDS Sala_0559 NC_008048.1 573703 573936 D hypothetical protein 573703..573936 Sphingopyxis alaskensis RB2256 4081449 YP_615614.1 CDS Sala_0560 NC_008048.1 574015 574614 R ACP phosphodiesterase complement(574015..574614) Sphingopyxis alaskensis RB2256 4081450 YP_615615.1 CDS Sala_0561 NC_008048.1 574726 575424 R Pirin-like protein complement(574726..575424) Sphingopyxis alaskensis RB2256 4081451 YP_615616.1 CDS Sala_0562 NC_008048.1 575672 576607 D LysR family transcriptional regulator 575672..576607 Sphingopyxis alaskensis RB2256 4081452 YP_615617.1 CDS Sala_0563 NC_008048.1 576804 577511 D two component transcriptional regulator 576804..577511 Sphingopyxis alaskensis RB2256 4081453 YP_615618.1 CDS rplQ NC_008048.1 577905 578324 R is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 complement(577905..578324) Sphingopyxis alaskensis RB2256 4081454 YP_615619.1 CDS Sala_0565 NC_008048.1 578579 579637 R catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha complement(578579..579637) Sphingopyxis alaskensis RB2256 4081455 YP_615620.1 CDS Sala_0566 NC_008048.1 579742 580131 R located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 complement(579742..580131) Sphingopyxis alaskensis RB2256 4081997 YP_615621.1 CDS rpsM NC_008048.1 580209 580577 R located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 complement(580209..580577) Sphingopyxis alaskensis RB2256 4081998 YP_615622.1 CDS Sala_0568 NC_008048.1 580804 581595 R inositol monophosphatase complement(580804..581595) Sphingopyxis alaskensis RB2256 4081999 YP_615623.1 CDS Sala_0569 NC_008048.1 581603 582946 R C69 family peptidase complement(581603..582946) Sphingopyxis alaskensis RB2256 4082000 YP_615624.1 CDS Sala_0570 NC_008048.1 582997 583395 R hypothetical protein complement(582997..583395) Sphingopyxis alaskensis RB2256 4082001 YP_615625.1 CDS Sala_0571 NC_008048.1 583613 584221 R hypothetical protein complement(583613..584221) Sphingopyxis alaskensis RB2256 4082002 YP_615626.1 CDS Sala_0572 NC_008048.1 584318 584833 R ubiquinone biosynthesis protein COQ7 complement(584318..584833) Sphingopyxis alaskensis RB2256 4082003 YP_615627.1 CDS Sala_0573 NC_008048.1 584830 585312 R disulfide bond formation protein complement(584830..585312) Sphingopyxis alaskensis RB2256 4082004 YP_615628.1 CDS Sala_0574 NC_008048.1 585400 586788 R carboxyl-terminal protease complement(585400..586788) Sphingopyxis alaskensis RB2256 4082005 YP_615629.1 CDS Sala_0575 NC_008048.1 587033 588250 R peptidase M23B complement(587033..588250) Sphingopyxis alaskensis RB2256 4082006 YP_615630.1 CDS Sala_0576 NC_008048.1 588247 588675 R hypothetical protein complement(588247..588675) Sphingopyxis alaskensis RB2256 4082007 YP_615631.1 CDS Sala_0577 NC_008048.1 588818 589216 R Iojap-related protein complement(588818..589216) Sphingopyxis alaskensis RB2256 4082008 YP_615632.1 CDS nadD NC_008048.1 589213 589866 R transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria; nicotinic acid mononucleotide adenylyltransferase complement(589213..589866) Sphingopyxis alaskensis RB2256 4082009 YP_615633.1 CDS Sala_0579 NC_008048.1 589863 590150 R hypothetical protein complement(589863..590150) Sphingopyxis alaskensis RB2256 4082010 YP_615634.1 CDS Sala_0580 NC_008048.1 590147 590419 R CopG family transcriptional regulator complement(590147..590419) Sphingopyxis alaskensis RB2256 4082011 YP_615635.1 CDS proA NC_008048.1 590451 591740 R Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase complement(590451..591740) Sphingopyxis alaskensis RB2256 4082012 YP_615636.1 CDS Sala_0582 NC_008048.1 591820 592956 D hypothetical protein 591820..592956 Sphingopyxis alaskensis RB2256 4082013 YP_615637.1 CDS Sala_0583 NC_008048.1 593134 594057 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(593134..594057) Sphingopyxis alaskensis RB2256 4082014 YP_615638.1 CDS Sala_0584 NC_008048.1 594302 595078 D catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazolesuccinocarboxamide synthase 594302..595078 Sphingopyxis alaskensis RB2256 4082015 YP_615639.1 CDS Sala_0585 NC_008048.1 595191 598082 D peptidase M16-like protein 595191..598082 Sphingopyxis alaskensis RB2256 4080612 YP_615640.1 CDS Sala_0586 NC_008048.1 598112 598471 D hypothetical protein 598112..598471 Sphingopyxis alaskensis RB2256 4080613 YP_615641.1 CDS Sala_0587 NC_008048.1 598468 598887 R hypothetical protein complement(598468..598887) Sphingopyxis alaskensis RB2256 4080614 YP_615642.1 CDS Sala_0588 NC_008048.1 599209 599691 R bacterioferritin complement(599209..599691) Sphingopyxis alaskensis RB2256 4080615 YP_615643.1 CDS Sala_0589 NC_008048.1 599843 600091 D hypothetical protein 599843..600091 Sphingopyxis alaskensis RB2256 4080616 YP_615644.1 CDS Sala_0590 NC_008048.1 600146 600376 D phosphoribosylformylglycinamidine synthase subunit PurS 600146..600376 Sphingopyxis alaskensis RB2256 4080617 YP_615645.1 CDS Sala_0591 NC_008048.1 600414 601079 D catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase I 600414..601079 Sphingopyxis alaskensis RB2256 4080618 YP_615646.1 CDS Sala_0592 NC_008048.1 601041 601412 R hypothetical protein complement(601041..601412) Sphingopyxis alaskensis RB2256 4080619 YP_615647.1 CDS Sala_0593 NC_008048.1 601416 602165 R hypothetical protein complement(601416..602165) Sphingopyxis alaskensis RB2256 4080620 YP_615648.1 CDS Sala_0594 NC_008048.1 602400 603122 R hypothetical protein complement(602400..603122) Sphingopyxis alaskensis RB2256 4080622 YP_615649.1 CDS Sala_0595 NC_008048.1 603178 603777 D TetR family transcriptional regulator 603178..603777 Sphingopyxis alaskensis RB2256 4080623 YP_615650.1 CDS Sala_0596 NC_008048.1 603804 605306 R major facilitator superfamily transporter complement(603804..605306) Sphingopyxis alaskensis RB2256 4080624 YP_615651.1 CDS Sala_0597 NC_008048.1 605507 606541 R LacI family transcriptional regulator complement(605507..606541) Sphingopyxis alaskensis RB2256 4080625 YP_615652.1 CDS Sala_0598 NC_008048.1 606733 607476 R hypothetical protein complement(606733..607476) Sphingopyxis alaskensis RB2256 4080626 YP_615653.1 CDS Sala_0599 NC_008048.1 607540 608892 R hypothetical protein complement(607540..608892) Sphingopyxis alaskensis RB2256 4080627 YP_615654.1 CDS Sala_0600 NC_008048.1 608902 610176 R Na+/H+ antiporter NhaA complement(608902..610176) Sphingopyxis alaskensis RB2256 4080628 YP_615655.1 CDS Sala_0601 NC_008048.1 610286 611737 D bacteriophage N4 adsorption protein B 610286..611737 Sphingopyxis alaskensis RB2256 4080629 YP_615656.1 CDS Sala_0602 NC_008048.1 612046 612852 D hypothetical protein 612046..612852 Sphingopyxis alaskensis RB2256 4080630 YP_615657.1 CDS Sala_0603 NC_008048.1 612922 613869 D hypothetical protein 612922..613869 Sphingopyxis alaskensis RB2256 4082539 YP_615658.1 CDS Sala_0604 NC_008048.1 613866 614639 D hypothetical protein 613866..614639 Sphingopyxis alaskensis RB2256 4082540 YP_615659.1 CDS Sala_0605 NC_008048.1 614727 616436 D hypothetical protein 614727..616436 Sphingopyxis alaskensis RB2256 4082541 YP_615660.1 CDS Sala_0606 NC_008048.1 616832 617224 R glyoxalase family protein complement(616832..617224) Sphingopyxis alaskensis RB2256 4082542 YP_615661.1 CDS Sala_0607 NC_008048.1 617263 618393 R cell wall hydrolase SleB complement(617263..618393) Sphingopyxis alaskensis RB2256 4082543 YP_615662.1 CDS Sala_0608 NC_008048.1 618574 619089 R hypothetical protein complement(618574..619089) Sphingopyxis alaskensis RB2256 4082544 YP_615663.1 CDS Sala_0609 NC_008048.1 619301 619846 D hypothetical protein 619301..619846 Sphingopyxis alaskensis RB2256 4082545 YP_615664.1 CDS nusA NC_008048.1 619846 621492 D modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 619846..621492 Sphingopyxis alaskensis RB2256 4082546 YP_615665.1 CDS Sala_0611 NC_008048.1 621473 622231 D hypothetical protein 621473..622231 Sphingopyxis alaskensis RB2256 4082547 YP_615666.1 CDS infB NC_008048.1 622249 624786 D Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 622249..624786 Sphingopyxis alaskensis RB2256 4082548 YP_615667.1 CDS rbfA NC_008048.1 624839 625249 D associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 624839..625249 Sphingopyxis alaskensis RB2256 4082549 YP_615668.1 CDS Sala_0614 NC_008048.1 625278 625709 D aromatic ring-cleaving dioxygenase-like protein 625278..625709 Sphingopyxis alaskensis RB2256 4082550 YP_615669.1 CDS Sala_0615 NC_008048.1 625673 626785 R tRNA synthetase complement(625673..626785) Sphingopyxis alaskensis RB2256 4082551 YP_615670.1 CDS Sala_0616 NC_008048.1 626996 628582 R catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase complement(626996..628582) Sphingopyxis alaskensis RB2256 4082552 YP_615671.1 CDS Sala_0617 NC_008048.1 628726 629856 R catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; phosphoserine aminotransferase complement(628726..629856) Sphingopyxis alaskensis RB2256 4082553 YP_615672.1 CDS Sala_0618 NC_008048.1 630026 630727 D extensin-like protein 630026..630727 Sphingopyxis alaskensis RB2256 4082554 YP_615673.1 CDS Sala_0619 NC_008048.1 630889 631764 D hypothetical protein 630889..631764 Sphingopyxis alaskensis RB2256 4082555 YP_615674.1 CDS Sala_0620 NC_008048.1 631946 632389 R cytochrome c, class I complement(631946..632389) Sphingopyxis alaskensis RB2256 4082556 YP_615675.1 CDS Sala_0621 NC_008048.1 632389 633027 R cytochrome c, class I complement(632389..633027) Sphingopyxis alaskensis RB2256 4082557 YP_615676.1 CDS Sala_0622 NC_008048.1 633209 634102 D catalyzes the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis; prephenate dehydratase 633209..634102 Sphingopyxis alaskensis RB2256 4082558 YP_615677.1 CDS Sala_0623 NC_008048.1 634108 634782 R CDP-alcohol phosphatidyltransferase complement(634108..634782) Sphingopyxis alaskensis RB2256 4082559 YP_615678.1 CDS Sala_0624 NC_008048.1 634902 635393 R hypothetical protein complement(634902..635393) Sphingopyxis alaskensis RB2256 4082560 YP_615679.1 CDS Sala_0625 NC_008048.1 635390 638203 R DNA polymerase I complement(635390..638203) Sphingopyxis alaskensis RB2256 4082561 YP_615680.1 CDS Sala_0626 NC_008048.1 638262 638720 R gentamicin 3'-N-acetyltransferase complement(638262..638720) Sphingopyxis alaskensis RB2256 4082562 YP_615681.1 CDS Sala_0627 NC_008048.1 638827 639090 R hypothetical protein complement(638827..639090) Sphingopyxis alaskensis RB2256 4082563 YP_615682.1 CDS Sala_0628 NC_008048.1 639242 639535 D hypothetical protein 639242..639535 Sphingopyxis alaskensis RB2256 4082564 YP_615683.1 CDS Sala_0629 NC_008048.1 639690 640253 D alkyl hydroperoxide reductase 639690..640253 Sphingopyxis alaskensis RB2256 4082565 YP_615684.1 CDS Sala_0630 NC_008048.1 640393 641955 D FAD-dependent pyridine nucleotide-disulfide oxidoreductase 640393..641955 Sphingopyxis alaskensis RB2256 4082566 YP_615685.1 CDS Sala_0631 NC_008048.1 641971 642459 R glutathione-dependent formaldehyde-activating protein complement(641971..642459) Sphingopyxis alaskensis RB2256 4082567 YP_615686.1 CDS Sala_0632 NC_008048.1 642513 643217 R glutathione S-transferase-like protein complement(642513..643217) Sphingopyxis alaskensis RB2256 4082568 YP_615687.1 CDS Sala_0633 NC_008048.1 643328 643672 D HxlR family transcriptional regulator 643328..643672 Sphingopyxis alaskensis RB2256 4082569 YP_615688.1 CDS guaA NC_008048.1 643677 645290 R contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase complement(643677..645290) Sphingopyxis alaskensis RB2256 4082570 YP_615689.1 CDS Sala_0635 NC_008048.1 645456 647861 D TonB-dependent receptor 645456..647861 Sphingopyxis alaskensis RB2256 4082571 YP_615690.1 CDS Sala_0636 NC_008048.1 647858 648910 R group 1 glycosyl transferase complement(647858..648910) Sphingopyxis alaskensis RB2256 4082572 YP_615691.1 CDS Sala_0637 NC_008048.1 648907 649779 R metallophosphoesterase complement(648907..649779) Sphingopyxis alaskensis RB2256 4082573 YP_615692.1 CDS Sala_0638 NC_008048.1 649954 651387 R aldehyde dehydrogenase complement(649954..651387) Sphingopyxis alaskensis RB2256 4082574 YP_615693.1 CDS Sala_0639 NC_008048.1 651499 653145 R catalyzes the condensation of two pyruvates to form acetolactate, implicated in pH homeostasis via the acetoin-2,3-butanediol pathway or in valine biosynthesis; acetolactate synthase complement(651499..653145) Sphingopyxis alaskensis RB2256 4082575 YP_615694.1 CDS Sala_0640 NC_008048.1 653681 654184 R hypothetical protein complement(653681..654184) Sphingopyxis alaskensis RB2256 4082576 YP_615695.1 CDS Sala_0641 NC_008048.1 654193 654492 R hypothetical protein complement(654193..654492) Sphingopyxis alaskensis RB2256 4082577 YP_615696.1 CDS Sala_0642 NC_008048.1 654582 656405 R cobalt chelatase subunit CobT complement(654582..656405) Sphingopyxis alaskensis RB2256 4082732 YP_615697.1 CDS Sala_0643 NC_008048.1 656711 657910 R hypothetical protein complement(656711..657910) Sphingopyxis alaskensis RB2256 4082733 YP_615698.1 CDS Sala_0644 NC_008048.1 657907 658896 R cobalt chelatase small subunit complement(657907..658896) Sphingopyxis alaskensis RB2256 4082734 YP_615699.1 CDS Sala_0645 NC_008048.1 659153 659590 R hypothetical protein complement(659153..659590) Sphingopyxis alaskensis RB2256 4082735 YP_615700.1 CDS Sala_0646 NC_008048.1 659601 660131 R heat shock protein DnaJ-like protein complement(659601..660131) Sphingopyxis alaskensis RB2256 4082736 YP_615701.1 CDS Sala_0647 NC_008048.1 660260 660550 D BolA-like protein 660260..660550 Sphingopyxis alaskensis RB2256 4082737 YP_615702.1 CDS Sala_0648 NC_008048.1 660559 660927 D hypothetical protein 660559..660927 Sphingopyxis alaskensis RB2256 4082738 YP_615703.1 CDS Sala_0649 NC_008048.1 660947 661831 D Pirin-like protein 660947..661831 Sphingopyxis alaskensis RB2256 4082739 YP_615704.1 CDS Sala_0650 NC_008048.1 662045 662968 D alpha/beta hydrolase 662045..662968 Sphingopyxis alaskensis RB2256 4082740 YP_615705.1 CDS Sala_0651 NC_008048.1 663054 663476 R hypothetical protein complement(663054..663476) Sphingopyxis alaskensis RB2256 4082741 YP_615706.1 CDS Sala_0652 NC_008048.1 663481 664632 D beta-lactamase 663481..664632 Sphingopyxis alaskensis RB2256 4082742 YP_615707.1 CDS Sala_0653 NC_008048.1 664627 665448 R phenazine biosynthesis PhzC/PhzF protein complement(664627..665448) Sphingopyxis alaskensis RB2256 4082743 YP_615708.1 CDS Sala_0654 NC_008048.1 665445 666095 R pyridoxamine 5'-phosphate oxidase complement(665445..666095) Sphingopyxis alaskensis RB2256 4082744 YP_615709.1 CDS Sala_0655 NC_008048.1 666155 667072 D chaperone DnaJ-like protein 666155..667072 Sphingopyxis alaskensis RB2256 4082745 YP_615710.1 CDS Sala_0656 NC_008048.1 667076 668143 D ribonuclease BN 667076..668143 Sphingopyxis alaskensis RB2256 4082746 YP_615711.1 CDS Sala_0657 NC_008048.1 668161 668988 D enoyl-acyl-carrier-protein reductase 668161..668988 Sphingopyxis alaskensis RB2256 4082747 YP_615712.1 CDS Sala_0658 NC_008048.1 668988 669362 D glyoxalase/bleomycin resistance protein/dioxygenase 668988..669362 Sphingopyxis alaskensis RB2256 4082748 YP_615713.1 CDS Sala_0659 NC_008048.1 669359 670435 D catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 669359..670435 Sphingopyxis alaskensis RB2256 4082749 YP_615714.1 CDS Sala_0660 NC_008048.1 670443 672233 D hypothetical protein 670443..672233 Sphingopyxis alaskensis RB2256 4082750 YP_615715.1 CDS Sala_0661 NC_008048.1 672308 673633 D sodium:dicarboxylate symporter 672308..673633 Sphingopyxis alaskensis RB2256 4082958 YP_615716.1 CDS Sala_0662 NC_008048.1 673643 674458 R hypothetical protein complement(673643..674458) Sphingopyxis alaskensis RB2256 4082959 YP_615717.1 CDS Sala_0663 NC_008048.1 674618 676027 D cytochrome P450 674618..676027 Sphingopyxis alaskensis RB2256 4082960 YP_615718.1 CDS Sala_0664 NC_008048.1 676143 676877 D extensin-like protein 676143..676877 Sphingopyxis alaskensis RB2256 4082961 YP_615719.1 CDS Sala_0665 NC_008048.1 676868 677146 D hypothetical protein 676868..677146 Sphingopyxis alaskensis RB2256 4082962 YP_615720.1 CDS Sala_0666 NC_008048.1 677133 677579 R N-acetyltransferase GCN5 complement(677133..677579) Sphingopyxis alaskensis RB2256 4082963 YP_615721.1 CDS Sala_0667 NC_008048.1 677582 677938 R HesB/YadR/YfhF complement(677582..677938) Sphingopyxis alaskensis RB2256 4082964 YP_615722.1 CDS Sala_0668 NC_008048.1 678090 678560 R hypothetical protein complement(678090..678560) Sphingopyxis alaskensis RB2256 4082965 YP_615723.1 CDS Sala_0669 NC_008048.1 678557 679801 R SufS subfamily cysteine desulfurase complement(678557..679801) Sphingopyxis alaskensis RB2256 4082966 YP_615724.1 CDS Sala_0670 NC_008048.1 679798 680526 R SufBD protein complement(679798..680526) Sphingopyxis alaskensis RB2256 4082967 YP_615725.1 CDS Sala_0671 NC_008048.1 680732 681475 R FeS assembly ATPase SufC complement(680732..681475) Sphingopyxis alaskensis RB2256 4082968 YP_615726.1 CDS Sala_0672 NC_008048.1 681462 681977 R acetyltransferase complement(681462..681977) Sphingopyxis alaskensis RB2256 4082969 YP_615727.1 CDS Sala_0673 NC_008048.1 681974 682495 R hypothetical protein complement(681974..682495) Sphingopyxis alaskensis RB2256 4082970 YP_615728.1 CDS Sala_0674 NC_008048.1 682492 683979 R with SufCD activates cysteine desulfurase SufS; cysteine desulfurase activator complex subunit SufB complement(682492..683979) Sphingopyxis alaskensis RB2256 4082971 YP_615729.1 CDS Sala_0675 NC_008048.1 683984 684484 R BadM/Rrf2 family transcriptional regulator complement(683984..684484) Sphingopyxis alaskensis RB2256 4082972 YP_615730.1 CDS Sala_0676 NC_008048.1 684556 684798 R hypothetical protein complement(684556..684798) Sphingopyxis alaskensis RB2256 4082973 YP_615731.1 CDS Sala_0677 NC_008048.1 684795 685289 R transposase, IS4 complement(684795..685289) Sphingopyxis alaskensis RB2256 4082974 YP_615732.1 CDS Sala_0678 NC_008048.1 685639 686526 R AraC family transcriptional regulator complement(685639..686526) Sphingopyxis alaskensis RB2256 4082975 YP_615733.1 CDS Sala_0679 NC_008048.1 686628 688445 R hypothetical protein complement(686628..688445) Sphingopyxis alaskensis RB2256 4082976 YP_615734.1 CDS Sala_0680 NC_008048.1 688516 689586 D catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 688516..689586 Sphingopyxis alaskensis RB2256 4082977 YP_615735.1 CDS Sala_0681 NC_008048.1 689632 691359 D gamma-glutamyltransferase 689632..691359 Sphingopyxis alaskensis RB2256 4081940 YP_615736.1 CDS Sala_0682 NC_008048.1 691469 693274 D AMP-dependent synthetase and ligase 691469..693274 Sphingopyxis alaskensis RB2256 4081941 YP_615737.1 CDS Sala_0683 NC_008048.1 693375 693899 R hypothetical protein complement(693375..693899) Sphingopyxis alaskensis RB2256 4081942 YP_615738.1 CDS Sala_0684 NC_008048.1 693889 694629 R hydroxyacylglutathione hydrolase complement(693889..694629) Sphingopyxis alaskensis RB2256 4081943 YP_615739.1 CDS Sala_0685 NC_008048.1 694744 695181 R glyoxalase/bleomycin resistance protein/dioxygenase complement(694744..695181) Sphingopyxis alaskensis RB2256 4081944 YP_615740.1 CDS Sala_0686 NC_008048.1 695191 695628 R 4-hydroxybenzoyl-CoA thioesterase complement(695191..695628) Sphingopyxis alaskensis RB2256 4081945 YP_615741.1 CDS Sala_0687 NC_008048.1 695706 696470 R alpha/beta hydrolase complement(695706..696470) Sphingopyxis alaskensis RB2256 4081946 YP_615742.1 CDS Sala_0688 NC_008048.1 696600 696854 R hypothetical protein complement(696600..696854) Sphingopyxis alaskensis RB2256 4081947 YP_615743.1 CDS Sala_0689 NC_008048.1 696926 697117 R XRE family transcriptional regulator complement(696926..697117) Sphingopyxis alaskensis RB2256 4081948 YP_615744.1 CDS Sala_0690 NC_008048.1 697114 697527 R hypothetical protein complement(697114..697527) Sphingopyxis alaskensis RB2256 4081949 YP_615745.1 CDS Sala_0691 NC_008048.1 697770 698096 D hypothetical protein 697770..698096 Sphingopyxis alaskensis RB2256 4081950 YP_615746.1 CDS thrS NC_008048.1 698389 700392 D catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 698389..700392 Sphingopyxis alaskensis RB2256 4081951 YP_615747.1 CDS Sala_0693 NC_008048.1 700389 701075 D AraC family transcriptional regulator 700389..701075 Sphingopyxis alaskensis RB2256 4081952 YP_615748.1 CDS Sala_0694 NC_008048.1 701085 702242 D hypothetical protein 701085..702242 Sphingopyxis alaskensis RB2256 4081953 YP_615749.1 CDS Sala_0695 NC_008048.1 702284 703042 D hypothetical protein 702284..703042 Sphingopyxis alaskensis RB2256 4081954 YP_615750.1 CDS Sala_0696 NC_008048.1 703112 703558 D hypothetical protein 703112..703558 Sphingopyxis alaskensis RB2256 4081955 YP_615751.1 CDS Sala_0697 NC_008048.1 703555 703920 D PilT protein-like protein 703555..703920 Sphingopyxis alaskensis RB2256 4081956 YP_615752.1 CDS Sala_0698 NC_008048.1 703941 706442 R hypothetical protein complement(703941..706442) Sphingopyxis alaskensis RB2256 4081957 YP_615753.1 CDS Sala_0699 NC_008048.1 706558 707259 R ABC transporter complement(706558..707259) Sphingopyxis alaskensis RB2256 4081958 YP_615754.1 CDS Sala_0700 NC_008048.1 707277 707990 D lipolytic protein G-D-S-L 707277..707990 Sphingopyxis alaskensis RB2256 4081789 YP_615755.1 CDS Sala_0701 NC_008048.1 708029 708352 R hypothetical protein complement(708029..708352) Sphingopyxis alaskensis RB2256 4081790 YP_615756.1 CDS Sala_0702 NC_008048.1 708439 708897 R hypothetical protein complement(708439..708897) Sphingopyxis alaskensis RB2256 4081791 YP_615757.1 CDS Sala_0703 NC_008048.1 709125 710387 R hypothetical protein complement(709125..710387) Sphingopyxis alaskensis RB2256 4081792 YP_615758.1 CDS Sala_0704 NC_008048.1 710389 710706 D hypothetical protein 710389..710706 Sphingopyxis alaskensis RB2256 4081793 YP_615759.1 CDS Sala_0705 NC_008048.1 710673 711002 R hypothetical protein complement(710673..711002) Sphingopyxis alaskensis RB2256 4081794 YP_615760.1 CDS Sala_0706 NC_008048.1 711153 712034 D LysR family transcriptional regulator 711153..712034 Sphingopyxis alaskensis RB2256 4081795 YP_615761.1 CDS Sala_0707 NC_008048.1 712035 712535 R hypothetical protein complement(712035..712535) Sphingopyxis alaskensis RB2256 4081796 YP_615762.1 CDS Sala_0708 NC_008048.1 712708 713823 D binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 712708..713823 Sphingopyxis alaskensis RB2256 4081797 YP_615763.1 CDS Sala_0709 NC_008048.1 713929 715272 R L-sorbosone dehydrogenase complement(713929..715272) Sphingopyxis alaskensis RB2256 4081798 YP_615764.1 CDS Sala_0710 NC_008048.1 715452 715667 D hypothetical protein 715452..715667 Sphingopyxis alaskensis RB2256 4081799 YP_615765.1 CDS Sala_0711 NC_008048.1 715661 716596 R catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis; N-acetyl-gamma-glutamyl-phosphate reductase complement(715661..716596) Sphingopyxis alaskensis RB2256 4081800 YP_615766.1 CDS Sala_0712 NC_008048.1 716599 717519 R cell wall-associated hydrolase complement(716599..717519) Sphingopyxis alaskensis RB2256 4081801 YP_615767.1 CDS Sala_0713 NC_008048.1 717618 719021 R leucyl aminopeptidase complement(717618..719021) Sphingopyxis alaskensis RB2256 4081802 YP_615768.1 CDS Sala_0714 NC_008048.1 719077 719916 D hypothetical protein 719077..719916 Sphingopyxis alaskensis RB2256 4081803 YP_615769.1 CDS Sala_0715 NC_008048.1 720136 721647 R monooxygenase flavin-binding family protein complement(720136..721647) Sphingopyxis alaskensis RB2256 4081804 YP_615770.1 CDS Sala_0716 NC_008048.1 722321 722965 D hypothetical protein 722321..722965 Sphingopyxis alaskensis RB2256 4081805 YP_615771.1 CDS Sala_0717 NC_008048.1 723152 724165 D phosphate transporter 723152..724165 Sphingopyxis alaskensis RB2256 4081806 YP_615772.1 CDS rimO NC_008048.1 724305 725672 R catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit; 30S ribosomal protein S12 methylthiotransferase complement(724305..725672) Sphingopyxis alaskensis RB2256 4081807 YP_615773.1 CDS Sala_0719 NC_008048.1 725757 726158 D hypothetical protein 725757..726158 Sphingopyxis alaskensis RB2256 4081808 YP_615774.1 CDS Sala_0720 NC_008048.1 726177 727244 R hypothetical protein complement(726177..727244) Sphingopyxis alaskensis RB2256 4081340 YP_615775.1 CDS surE NC_008048.1 727399 728220 R catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE complement(727399..728220) Sphingopyxis alaskensis RB2256 4081341 YP_615776.1 CDS Sala_0722 NC_008048.1 728289 729569 R catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase complement(728289..729569) Sphingopyxis alaskensis RB2256 4081342 YP_615777.1 CDS Sala_0723 NC_008048.1 729706 731151 R hypothetical protein complement(729706..731151) Sphingopyxis alaskensis RB2256 4081343 YP_615778.1 CDS Sala_0724 NC_008048.1 731379 731840 D TraR/DksA family transcriptional regulator 731379..731840 Sphingopyxis alaskensis RB2256 4081344 YP_615779.1 CDS Sala_0725 NC_008048.1 731929 732318 D type IV pilus assembly PilZ 731929..732318 Sphingopyxis alaskensis RB2256 4081345 YP_615780.1 CDS Sala_0726 NC_008048.1 732647 732844 D hypothetical protein 732647..732844 Sphingopyxis alaskensis RB2256 4081346 YP_615781.1 CDS Sala_0727 NC_008048.1 732977 733417 D hypothetical protein 732977..733417 Sphingopyxis alaskensis RB2256 4081347 YP_615782.1 CDS Sala_0728 NC_008048.1 733737 734429 D DSBA oxidoreductase 733737..734429 Sphingopyxis alaskensis RB2256 4081348 YP_615783.1 CDS Sala_0729 NC_008048.1 734514 736103 D sulfatase 734514..736103 Sphingopyxis alaskensis RB2256 4081349 YP_615784.1 CDS Sala_0730 NC_008048.1 736267 736905 D hypothetical protein 736267..736905 Sphingopyxis alaskensis RB2256 4081350 YP_615785.1 CDS Sala_0731 NC_008048.1 737022 737810 R hypothetical protein complement(737022..737810) Sphingopyxis alaskensis RB2256 4081351 YP_615786.1 CDS Sala_0732 NC_008048.1 737807 738535 R hypothetical protein complement(737807..738535) Sphingopyxis alaskensis RB2256 4081352 YP_615787.1 CDS Sala_0733 NC_008048.1 738816 739130 R excinuclease ABC subunit C complement(738816..739130) Sphingopyxis alaskensis RB2256 4081353 YP_615788.1 CDS Sala_0735 NC_008048.1 740222 740860 R TetR family transcriptional regulator complement(740222..740860) Sphingopyxis alaskensis RB2256 4081355 YP_615789.1 CDS Sala_0736 NC_008048.1 740966 741661 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 740966..741661 Sphingopyxis alaskensis RB2256 4081356 YP_615790.1 CDS Sala_0737 NC_008048.1 741811 742848 R glycoside hydrolase complement(741811..742848) Sphingopyxis alaskensis RB2256 4081357 YP_615791.1 CDS Sala_0738 NC_008048.1 742845 743924 R aldose 1-epimerase complement(742845..743924) Sphingopyxis alaskensis RB2256 4081358 YP_615792.1 CDS Sala_0739 NC_008048.1 744038 745084 D glycoside hydrolase 744038..745084 Sphingopyxis alaskensis RB2256 4081149 YP_615793.1 CDS Sala_0740 NC_008048.1 745041 746558 R tryptophan halogenase complement(745041..746558) Sphingopyxis alaskensis RB2256 4081150 YP_615794.1 CDS Sala_0741 NC_008048.1 746639 749395 R TonB-dependent receptor complement(746639..749395) Sphingopyxis alaskensis RB2256 4081151 YP_615795.1 CDS Sala_0742 NC_008048.1 749522 750658 R galactonate dehydratase complement(749522..750658) Sphingopyxis alaskensis RB2256 4081152 YP_615796.1 CDS Sala_0743 NC_008048.1 750803 751702 D 2-dehydro-3-deoxygalactonokinase 750803..751702 Sphingopyxis alaskensis RB2256 4081153 YP_615797.1 CDS Sala_0744 NC_008048.1 751699 752343 D KDPG and KHG aldolase 751699..752343 Sphingopyxis alaskensis RB2256 4081154 YP_615798.1 CDS Sala_0745 NC_008048.1 752340 753260 D D-galactose 1-dehydrogenase 752340..753260 Sphingopyxis alaskensis RB2256 4081155 YP_615799.1 CDS Sala_0746 NC_008048.1 753326 754051 D GntR family transcriptional regulator 753326..754051 Sphingopyxis alaskensis RB2256 4081156 YP_615800.1 CDS Sala_0747 NC_008048.1 754052 754906 D senescence marker protein-30 754052..754906 Sphingopyxis alaskensis RB2256 4081157 YP_615801.1 CDS Sala_0748 NC_008048.1 754854 756215 R extracellular solute-binding protein complement(754854..756215) Sphingopyxis alaskensis RB2256 4081158 YP_615802.1 CDS Sala_0749 NC_008048.1 756212 757048 R binding-protein-dependent transport system inner membrane protein complement(756212..757048) Sphingopyxis alaskensis RB2256 4081159 YP_615803.1 CDS Sala_0750 NC_008048.1 757045 757917 R binding-protein-dependent transport system inner membrane protein complement(757045..757917) Sphingopyxis alaskensis RB2256 4081160 YP_615804.1 CDS Sala_0751 NC_008048.1 757914 759011 R ABC transporter complement(757914..759011) Sphingopyxis alaskensis RB2256 4081161 YP_615805.1 CDS Sala_0752 NC_008048.1 759069 759902 R phytanoyl-CoA dioxygenase complement(759069..759902) Sphingopyxis alaskensis RB2256 4081162 YP_615806.1 CDS Sala_0753 NC_008048.1 759986 761383 D glycoside hydrolase 759986..761383 Sphingopyxis alaskensis RB2256 4081163 YP_615807.1 CDS Sala_0754 NC_008048.1 761621 763270 D peptide chain release factor 3 761621..763270 Sphingopyxis alaskensis RB2256 4081164 YP_615808.1 CDS Sala_0755 NC_008048.1 763328 763798 D hypothetical protein 763328..763798 Sphingopyxis alaskensis RB2256 4081165 YP_615809.1 CDS Sala_0756 NC_008048.1 764045 765175 R involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV complement(764045..765175) Sphingopyxis alaskensis RB2256 4081166 YP_615810.1 CDS Sala_0757 NC_008048.1 765545 766156 D hypothetical protein 765545..766156 Sphingopyxis alaskensis RB2256 4080900 YP_615811.1 CDS Sala_0758 NC_008048.1 766297 767031 D two component transcriptional regulator 766297..767031 Sphingopyxis alaskensis RB2256 4080901 YP_615812.1 CDS Sala_0759 NC_008048.1 767085 768377 D sensor signal transduction histidine kinase 767085..768377 Sphingopyxis alaskensis RB2256 4080902 YP_615813.1 CDS Sala_0760 NC_008048.1 768488 769288 R hypothetical protein complement(768488..769288) Sphingopyxis alaskensis RB2256 4080903 YP_615814.1 CDS Sala_0761 NC_008048.1 769296 770468 R saccharopine dehydrogenase complement(769296..770468) Sphingopyxis alaskensis RB2256 4080904 YP_615815.1 CDS dcd NC_008048.1 770669 771223 R Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase complement(770669..771223) Sphingopyxis alaskensis RB2256 4080905 YP_615816.1 CDS Sala_0763 NC_008048.1 771263 771718 R cytidine deaminase complement(771263..771718) Sphingopyxis alaskensis RB2256 4080906 YP_615817.1 CDS Sala_0764 NC_008048.1 771715 772470 R glycoside hydrolase complement(771715..772470) Sphingopyxis alaskensis RB2256 4080907 YP_615818.1 CDS Sala_0765 NC_008048.1 772473 772970 R hypothetical protein complement(772473..772970) Sphingopyxis alaskensis RB2256 4080908 YP_615819.1 CDS Sala_0766 NC_008048.1 773221 774732 D unwinds double stranded DNA; replicative DNA helicase 773221..774732 Sphingopyxis alaskensis RB2256 4080909 YP_615820.1 CDS Sala_0767 NC_008048.1 774827 775135 R excinuclease ABC subunit C complement(774827..775135) Sphingopyxis alaskensis RB2256 4080910 YP_615821.1 CDS Sala_0768 NC_008048.1 775176 775982 R catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite; phosphoadenosine phosphosulfate reductase complement(775176..775982) Sphingopyxis alaskensis RB2256 4080911 YP_615822.1 CDS Sala_0769 NC_008048.1 776047 776493 R hypothetical protein complement(776047..776493) Sphingopyxis alaskensis RB2256 4080912 YP_615823.1 CDS Sala_0770 NC_008048.1 776486 778117 R nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like protein complement(776486..778117) Sphingopyxis alaskensis RB2256 4080913 YP_615824.1 CDS Sala_0771 NC_008048.1 778119 778415 R hypothetical protein complement(778119..778415) Sphingopyxis alaskensis RB2256 4080914 YP_615825.1 CDS Sala_0772 NC_008048.1 778412 779293 R uroporphyrin-III C-methyltransferase complement(778412..779293) Sphingopyxis alaskensis RB2256 4080915 YP_615826.1 CDS astD NC_008048.1 779323 780768 R a high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity; converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH; succinylglutamic semialdehyde dehydrogenase complement(779323..780768) Sphingopyxis alaskensis RB2256 4080916 YP_615827.1 CDS Sala_0774 NC_008048.1 780895 781818 D alpha/beta hydrolase 780895..781818 Sphingopyxis alaskensis RB2256 4080917 YP_615828.1 CDS Sala_0775 NC_008048.1 781815 782987 D group 1 glycosyl transferase 781815..782987 Sphingopyxis alaskensis RB2256 4080918 YP_615829.1 CDS Sala_0776 NC_008048.1 783072 784475 D 2-nitropropane dioxygenase 783072..784475 Sphingopyxis alaskensis RB2256 4080419 YP_615830.1 CDS Sala_0777 NC_008048.1 784517 784840 D hypothetical protein 784517..784840 Sphingopyxis alaskensis RB2256 4080420 YP_615831.1 CDS Sala_0778 NC_008048.1 784880 785878 R glycolate reductase complement(784880..785878) Sphingopyxis alaskensis RB2256 4080421 YP_615832.1 CDS Sala_0779 NC_008048.1 786122 786463 D hypothetical protein 786122..786463 Sphingopyxis alaskensis RB2256 4080422 YP_615833.1 CDS Sala_0780 NC_008048.1 786695 787162 R hypothetical protein complement(786695..787162) Sphingopyxis alaskensis RB2256 4080423 YP_615834.1 CDS Sala_0781 NC_008048.1 787380 788567 R Acetyl-CoA C-acetyltransferase complement(787380..788567) Sphingopyxis alaskensis RB2256 4080424 YP_615835.1 CDS Sala_0782 NC_008048.1 788724 790178 D aldehyde dehydrogenase 788724..790178 Sphingopyxis alaskensis RB2256 4080425 YP_615836.1 CDS Sala_0783 NC_008048.1 790306 791403 R hypothetical protein complement(790306..791403) Sphingopyxis alaskensis RB2256 4080426 YP_615837.1 CDS Sala_0784 NC_008048.1 791654 793426 D copper-resistance protein CopA 791654..793426 Sphingopyxis alaskensis RB2256 4080428 YP_615838.1 CDS Sala_0785 NC_008048.1 793423 794388 D copper resistance B 793423..794388 Sphingopyxis alaskensis RB2256 4080429 YP_615839.1 CDS rpsD NC_008048.1 794477 795088 R primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 complement(794477..795088) Sphingopyxis alaskensis RB2256 4080430 YP_615840.1 CDS Sala_0787 NC_008048.1 795195 795602 D chorismate mutase 795195..795602 Sphingopyxis alaskensis RB2256 4080431 YP_615841.1 CDS Sala_0788 NC_008048.1 795615 796361 R tRNA/rRNA methyltransferase SpoU complement(795615..796361) Sphingopyxis alaskensis RB2256 4080432 YP_615842.1 CDS nrdR NC_008048.1 796358 796825 R transcriptional regulator NrdR complement(796358..796825) Sphingopyxis alaskensis RB2256 4080433 YP_615843.1 CDS Sala_0790 NC_008048.1 796829 797047 R hypothetical protein complement(796829..797047) Sphingopyxis alaskensis RB2256 4080434 YP_615844.1 CDS glyA NC_008048.1 797053 798360 R catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase complement(797053..798360) Sphingopyxis alaskensis RB2256 4080435 YP_615845.1 CDS Sala_0792 NC_008048.1 798357 798809 R RpiB/LacA/LacB family sugar-phosphate isomerase complement(798357..798809) Sphingopyxis alaskensis RB2256 4080436 YP_615846.1 CDS Sala_0793 NC_008048.1 799193 799849 R hydrolase complement(799193..799849) Sphingopyxis alaskensis RB2256 4080437 YP_615847.1 CDS Sala_0794 NC_008048.1 799990 801081 D class V aminotransferase 799990..801081 Sphingopyxis alaskensis RB2256 4080343 YP_615848.1 CDS Sala_0795 NC_008048.1 801081 801416 D ferredoxin 801081..801416 Sphingopyxis alaskensis RB2256 4080344 YP_615849.1 CDS Sala_0796 NC_008048.1 801674 803371 D catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau 801674..803371 Sphingopyxis alaskensis RB2256 4080345 YP_615850.1 CDS Sala_0797 NC_008048.1 803368 803703 D hypothetical protein 803368..803703 Sphingopyxis alaskensis RB2256 4080346 YP_615851.1 CDS Sala_0798 NC_008048.1 803907 806303 D ATP-dependent protease La 803907..806303 Sphingopyxis alaskensis RB2256 4080347 YP_615852.1 CDS Sala_0799 NC_008048.1 806471 806743 D histone-like DNA-binding protein 806471..806743 Sphingopyxis alaskensis RB2256 4080348 YP_615853.1 CDS Sala_0800 NC_008048.1 807098 807406 D hypothetical protein 807098..807406 Sphingopyxis alaskensis RB2256 4080350 YP_615854.1 CDS Sala_0801 NC_008048.1 807523 808188 D two component transcriptional regulator 807523..808188 Sphingopyxis alaskensis RB2256 4080351 YP_615855.1 CDS Sala_0802 NC_008048.1 808286 809677 D sensor signal transduction histidine kinase 808286..809677 Sphingopyxis alaskensis RB2256 4080352 YP_615856.1 CDS Sala_0803 NC_008048.1 809791 810300 R putative ISRm2011-2 transposase protein complement(809791..810300) Sphingopyxis alaskensis RB2256 4080353 YP_615857.1 CDS Sala_0804 NC_008048.1 810846 811391 D transposase, IS111A/IS1328/IS1533 810846..811391 Sphingopyxis alaskensis RB2256 4080354 YP_615858.1 CDS Sala_0805 NC_008048.1 811857 812282 R biopolymer transport protein ExbD/TolR complement(811857..812282) Sphingopyxis alaskensis RB2256 4080355 YP_615859.1 CDS Sala_0806 NC_008048.1 812315 812836 R biopolymer transport ExbD protein complement(812315..812836) Sphingopyxis alaskensis RB2256 4080356 YP_615860.1 CDS Sala_0807 NC_008048.1 812940 813761 R MotA/TolQ/ExbB proton channel complement(812940..813761) Sphingopyxis alaskensis RB2256 4080357 YP_615861.1 CDS Sala_0808 NC_008048.1 813821 814474 R TonB-like protein complement(813821..814474) Sphingopyxis alaskensis RB2256 4080358 YP_615862.1 CDS Sala_0809 NC_008048.1 814753 815634 D hypothetical protein 814753..815634 Sphingopyxis alaskensis RB2256 4080359 YP_615863.1 CDS Sala_0810 NC_008048.1 815749 817083 D catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 815749..817083 Sphingopyxis alaskensis RB2256 4080360 YP_615864.1 CDS Sala_0812 NC_008048.1 817940 818254 D hypothetical protein 817940..818254 Sphingopyxis alaskensis RB2256 4080458 YP_615865.1 CDS Sala_0813 NC_008048.1 818229 818957 R hypothetical protein complement(818229..818957) Sphingopyxis alaskensis RB2256 4080459 YP_615866.1 CDS Sala_0814 NC_008048.1 819123 819737 D 2',5' RNA ligase 819123..819737 Sphingopyxis alaskensis RB2256 4080460 YP_615867.1 CDS Sala_0815 NC_008048.1 819647 820132 R protein tyrosine phosphatase complement(819647..820132) Sphingopyxis alaskensis RB2256 4080461 YP_615868.1 CDS Sala_0816 NC_008048.1 820239 821849 D major facilitator superfamily transporter 820239..821849 Sphingopyxis alaskensis RB2256 4080462 YP_615869.1 CDS Sala_0817 NC_008048.1 821854 822534 R superoxide dismutase, copper/zinc binding complement(821854..822534) Sphingopyxis alaskensis RB2256 4080463 YP_615870.1 CDS Sala_0818 NC_008048.1 822995 823669 D transposase and inactivated derivative 822995..823669 Sphingopyxis alaskensis RB2256 4080464 YP_615871.1 CDS Sala_0819 NC_008048.1 823687 823947 D hypothetical protein 823687..823947 Sphingopyxis alaskensis RB2256 4080465 YP_615872.1 CDS Sala_0821 NC_008048.1 824797 825495 R two component transcriptional regulator complement(824797..825495) Sphingopyxis alaskensis RB2256 4080467 YP_615873.1 CDS Sala_0822 NC_008048.1 825495 826217 R phosphate uptake regulator PhoU complement(825495..826217) Sphingopyxis alaskensis RB2256 4080468 YP_615874.1 CDS Sala_0823 NC_008048.1 826336 827118 R ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein complement(826336..827118) Sphingopyxis alaskensis RB2256 4080469 YP_615875.1 CDS Sala_0824 NC_008048.1 827135 828391 R phosphate ABC transporter permease complement(827135..828391) Sphingopyxis alaskensis RB2256 4080470 YP_615876.1 CDS Sala_0825 NC_008048.1 828384 829760 R phosphate ABC transporter permease complement(828384..829760) Sphingopyxis alaskensis RB2256 4080471 YP_615877.1 CDS Sala_0826 NC_008048.1 830073 831134 R phosphate binding protein complement(830073..831134) Sphingopyxis alaskensis RB2256 4080472 YP_615878.1 CDS Sala_0827 NC_008048.1 831276 832121 R hypothetical protein complement(831276..832121) Sphingopyxis alaskensis RB2256 4080473 YP_615879.1 CDS Sala_0828 NC_008048.1 832310 832618 D antibiotic biosynthesis monooxygenase 832310..832618 Sphingopyxis alaskensis RB2256 4080474 YP_615880.1 CDS Sala_0829 NC_008048.1 833336 834619 R citrate synthase I complement(833336..834619) Sphingopyxis alaskensis RB2256 4080475 YP_615881.1 CDS Sala_0830 NC_008048.1 834658 836130 R Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase complement(834658..836130) Sphingopyxis alaskensis RB2256 4080476 YP_615882.1 CDS Sala_0831 NC_008048.1 836189 838348 D ComEC/Rec2-like protein 836189..838348 Sphingopyxis alaskensis RB2256 4080039 YP_615883.1 CDS Sala_0832 NC_008048.1 838302 838985 R Represses a number of genes involved in the response to DNA damage; LexA repressor complement(838302..838985) Sphingopyxis alaskensis RB2256 4080040 YP_615884.1 CDS Sala_0833 NC_008048.1 839060 840250 R MoeA-like domain-containing protein complement(839060..840250) Sphingopyxis alaskensis RB2256 4080041 YP_615885.1 CDS Sala_0834 NC_008048.1 840247 841080 R molybdenum cofactor biosynthesis protein C complement(840247..841080) Sphingopyxis alaskensis RB2256 4080042 YP_615886.1 CDS Sala_0835 NC_008048.1 841089 841874 R Indole-3-glycerol phosphate synthase complement(841089..841874) Sphingopyxis alaskensis RB2256 4080043 YP_615887.1 CDS trpD NC_008048.1 842002 843000 R Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase complement(842002..843000) Sphingopyxis alaskensis RB2256 4080044 YP_615888.1 CDS Sala_0837 NC_008048.1 842997 843587 R glutamine amidotransferase of anthranilate synthase or para-aminobenzoate synthase complement(842997..843587) Sphingopyxis alaskensis RB2256 4080045 YP_615889.1 CDS Sala_0838 NC_008048.1 843674 844957 R hypothetical protein complement(843674..844957) Sphingopyxis alaskensis RB2256 4080046 YP_615890.1 CDS Sala_0839 NC_008048.1 845068 846840 D hypothetical protein 845068..846840 Sphingopyxis alaskensis RB2256 4080047 YP_615891.1 CDS gatC NC_008048.1 846906 847208 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C 846906..847208 Sphingopyxis alaskensis RB2256 4080048 YP_615892.1 CDS gatA NC_008048.1 847208 848689 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 847208..848689 Sphingopyxis alaskensis RB2256 4080049 YP_615893.1 CDS gatB NC_008048.1 848780 850255 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 848780..850255 Sphingopyxis alaskensis RB2256 4080050 YP_615894.1 CDS tig NC_008048.1 850774 852408 D Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 850774..852408 Sphingopyxis alaskensis RB2256 4080052 YP_615895.1 CDS Sala_0844 NC_008048.1 852556 853173 R HhH-GPD complement(852556..853173) Sphingopyxis alaskensis RB2256 4080053 YP_615896.1 CDS Sala_0845 NC_008048.1 853274 853591 D ferredoxin 853274..853591 Sphingopyxis alaskensis RB2256 4080054 YP_615897.1 CDS Sala_0846 NC_008048.1 853625 854443 R RNA methyltransferase TrmH, group 3 complement(853625..854443) Sphingopyxis alaskensis RB2256 4080055 YP_615898.1 CDS Sala_0847 NC_008048.1 854753 855964 D phage integrase 854753..855964 Sphingopyxis alaskensis RB2256 4079983 YP_615899.1 CDS Sala_0848 NC_008048.1 855991 856251 R hypothetical protein complement(855991..856251) Sphingopyxis alaskensis RB2256 4079984 YP_615900.1 CDS Sala_0849 NC_008048.1 856522 857250 R IstB-like ATP-binding protein complement(856522..857250) Sphingopyxis alaskensis RB2256 4079985 YP_615901.1 CDS Sala_0850 NC_008048.1 857237 858751 R integrase catalytic subunit complement(857237..858751) Sphingopyxis alaskensis RB2256 4079986 YP_615902.1 CDS Sala_0851 NC_008048.1 858963 859808 D hypothetical protein 858963..859808 Sphingopyxis alaskensis RB2256 4079987 YP_615903.1 CDS Sala_0852 NC_008048.1 859857 860654 D enoyl-CoA hydratase/isomerase 859857..860654 Sphingopyxis alaskensis RB2256 4079988 YP_615904.1 CDS Sala_0853 NC_008048.1 860647 861444 D enoyl-CoA hydratase/isomerase 860647..861444 Sphingopyxis alaskensis RB2256 4079989 YP_615905.1 CDS Sala_0854 NC_008048.1 861664 862875 D acyl-CoA dehydrogenase-like protein 861664..862875 Sphingopyxis alaskensis RB2256 4079990 YP_615906.1 CDS Sala_0855 NC_008048.1 862877 863869 D acyl-CoA dehydrogenase-like protein 862877..863869 Sphingopyxis alaskensis RB2256 4079991 YP_615907.1 CDS Sala_0856 NC_008048.1 864189 865247 D hypothetical protein 864189..865247 Sphingopyxis alaskensis RB2256 4079992 YP_615908.1 CDS Sala_0857 NC_008048.1 865252 866172 D 2-nitropropane dioxygenase 865252..866172 Sphingopyxis alaskensis RB2256 4079993 YP_615909.1 CDS Sala_0858 NC_008048.1 866169 867167 R zinc-binding alcohol dehydrogenase complement(866169..867167) Sphingopyxis alaskensis RB2256 4079994 YP_615910.1 CDS Sala_0859 NC_008048.1 867167 867913 R short-chain dehydrogenase/reductase SDR complement(867167..867913) Sphingopyxis alaskensis RB2256 4079995 YP_615911.1 CDS Sala_0860 NC_008048.1 867910 869205 R acyl-CoA dehydrogenase-like protein complement(867910..869205) Sphingopyxis alaskensis RB2256 4079996 YP_615912.1 CDS Sala_0861 NC_008048.1 869236 870300 R aminoglycoside phosphotransferase complement(869236..870300) Sphingopyxis alaskensis RB2256 4079997 YP_615913.1 CDS Sala_0862 NC_008048.1 870297 870755 R MarR family transcriptional regulator complement(870297..870755) Sphingopyxis alaskensis RB2256 4079998 YP_615914.1 CDS Sala_0863 NC_008048.1 870779 871219 R hypothetical protein complement(870779..871219) Sphingopyxis alaskensis RB2256 4079999 YP_615915.1 CDS Sala_0864 NC_008048.1 871212 872072 R gluconolactonase complement(871212..872072) Sphingopyxis alaskensis RB2256 4080000 YP_615916.1 CDS Sala_0865 NC_008048.1 872154 873035 D short-chain dehydrogenase/reductase SDR 872154..873035 Sphingopyxis alaskensis RB2256 4080001 YP_615917.1 CDS Sala_0866 NC_008048.1 873032 873541 D hypothetical protein 873032..873541 Sphingopyxis alaskensis RB2256 4082656 YP_615918.1 CDS Sala_0867 NC_008048.1 873534 874394 D short-chain dehydrogenase/reductase SDR 873534..874394 Sphingopyxis alaskensis RB2256 4082657 YP_615919.1 CDS Sala_0868 NC_008048.1 874496 875272 D regulatory protein GntR 874496..875272 Sphingopyxis alaskensis RB2256 4082658 YP_615920.1 CDS Sala_0869 NC_008048.1 875269 876780 D AMP-dependent synthetase and ligase 875269..876780 Sphingopyxis alaskensis RB2256 4082659 YP_615921.1 CDS Sala_0870 NC_008048.1 876798 877586 R short chain dehydrogenase complement(876798..877586) Sphingopyxis alaskensis RB2256 4082660 YP_615922.1 CDS Sala_0871 NC_008048.1 877589 879073 R aldehyde dehydrogenase complement(877589..879073) Sphingopyxis alaskensis RB2256 4082661 YP_615923.1 CDS Sala_0872 NC_008048.1 879096 880289 R cytochrome P450 complement(879096..880289) Sphingopyxis alaskensis RB2256 4082662 YP_615924.1 CDS Sala_0873 NC_008048.1 880353 880913 D TetR family transcriptional regulator 880353..880913 Sphingopyxis alaskensis RB2256 4082663 YP_615925.1 CDS Sala_0874 NC_008048.1 880918 881808 R acyl-CoA dehydrogenase-like protein complement(880918..881808) Sphingopyxis alaskensis RB2256 4082664 YP_615926.1 CDS Sala_0875 NC_008048.1 881813 882964 R acyl-CoA dehydrogenase-like protein complement(881813..882964) Sphingopyxis alaskensis RB2256 4082665 YP_615927.1 CDS Sala_0876 NC_008048.1 882964 883716 R enoyl-CoA hydratase/isomerase complement(882964..883716) Sphingopyxis alaskensis RB2256 4082666 YP_615928.1 CDS Sala_0877 NC_008048.1 883713 884624 R short-chain dehydrogenase/reductase SDR complement(883713..884624) Sphingopyxis alaskensis RB2256 4082667 YP_615929.1 CDS Sala_0878 NC_008048.1 884626 885405 R response regulator receiver protein complement(884626..885405) Sphingopyxis alaskensis RB2256 4082668 YP_615930.1 CDS Sala_0879 NC_008048.1 885494 885907 D hypothetical protein 885494..885907 Sphingopyxis alaskensis RB2256 4082669 YP_615931.1 CDS Sala_0880 NC_008048.1 885904 886665 D short-chain dehydrogenase/reductase SDR 885904..886665 Sphingopyxis alaskensis RB2256 4082670 YP_615932.1 CDS Sala_0881 NC_008048.1 886665 888164 D AMP-dependent synthetase and ligase 886665..888164 Sphingopyxis alaskensis RB2256 4082671 YP_615933.1 CDS Sala_0882 NC_008048.1 888161 888982 D short-chain dehydrogenase/reductase SDR 888161..888982 Sphingopyxis alaskensis RB2256 4082672 YP_615934.1 CDS Sala_0883 NC_008048.1 888982 889776 D short-chain dehydrogenase/reductase SDR 888982..889776 Sphingopyxis alaskensis RB2256 4082673 YP_615935.1 CDS Sala_0884 NC_008048.1 889801 890595 D short-chain dehydrogenase/reductase SDR 889801..890595 Sphingopyxis alaskensis RB2256 4082674 YP_615936.1 CDS Sala_0885 NC_008048.1 890605 891621 D hypothetical protein 890605..891621 Sphingopyxis alaskensis RB2256 4082785 YP_615937.1 CDS Sala_0886 NC_008048.1 891742 894162 D TonB-dependent receptor 891742..894162 Sphingopyxis alaskensis RB2256 4082786 YP_615938.1 CDS Sala_0887 NC_008048.1 894248 895498 D major facilitator superfamily transporter 894248..895498 Sphingopyxis alaskensis RB2256 4082787 YP_615939.1 CDS Sala_0888 NC_008048.1 895533 896651 R amidohydrolase 2 complement(895533..896651) Sphingopyxis alaskensis RB2256 4082788 YP_615940.1 CDS Sala_0889 NC_008048.1 896772 897488 D regulatory protein GntR 896772..897488 Sphingopyxis alaskensis RB2256 4082789 YP_615941.1 CDS Sala_0890 NC_008048.1 897485 898711 D flavin reductase-like, FMN-binding 897485..898711 Sphingopyxis alaskensis RB2256 4082790 YP_615942.1 CDS Sala_0891 NC_008048.1 898775 899992 D related to DitF possibly involved in diterpenoid metabolism; thiolase 898775..899992 Sphingopyxis alaskensis RB2256 4082791 YP_615943.1 CDS Sala_0892 NC_008048.1 899994 900422 D hypothetical protein 899994..900422 Sphingopyxis alaskensis RB2256 4082792 YP_615944.1 CDS Sala_0893 NC_008048.1 900466 902634 D acyl-CoA transferase/carnitine dehydratase-like protein 900466..902634 Sphingopyxis alaskensis RB2256 4082793 YP_615945.1 CDS Sala_0894 NC_008048.1 902631 904010 D aminoglycoside phosphotransferase 902631..904010 Sphingopyxis alaskensis RB2256 4082794 YP_615946.1 CDS Sala_0895 NC_008048.1 904119 904943 D catalyzes the formation of 5-alpha-androstane-3,17-dione from androsterone; Acts on other 3-alpha-hydroxysteroids and on 9-, 11- and 15-hydroxyprostaglandin.; 3-alpha-hydroxysteroid dehydrogenase 904119..904943 Sphingopyxis alaskensis RB2256 4082795 YP_615947.1 CDS Sala_0896 NC_008048.1 904966 905622 R TetR family transcriptional regulator complement(904966..905622) Sphingopyxis alaskensis RB2256 4082796 YP_615948.1 CDS Sala_0897 NC_008048.1 905739 906521 D short-chain dehydrogenase/reductase SDR 905739..906521 Sphingopyxis alaskensis RB2256 4082797 YP_615949.1 CDS Sala_0898 NC_008048.1 906523 907917 D major facilitator superfamily transporter 906523..907917 Sphingopyxis alaskensis RB2256 4082798 YP_615950.1 CDS Sala_0899 NC_008048.1 907914 908309 D hypothetical protein 907914..908309 Sphingopyxis alaskensis RB2256 4082799 YP_615951.1 CDS Sala_0900 NC_008048.1 908306 909475 D hypothetical protein 908306..909475 Sphingopyxis alaskensis RB2256 4082800 YP_615952.1 CDS Sala_0901 NC_008048.1 909548 910780 R L-carnitine dehydratase/bile acid-inducible protein F complement(909548..910780) Sphingopyxis alaskensis RB2256 4082801 YP_615953.1 CDS Sala_0902 NC_008048.1 910795 912270 R betaine aldehyde dehydrogenase complement(910795..912270) Sphingopyxis alaskensis RB2256 4082802 YP_615954.1 CDS Sala_0903 NC_008048.1 912284 913561 R cytochrome P450 complement(912284..913561) Sphingopyxis alaskensis RB2256 4082803 YP_615955.1 CDS Sala_0904 NC_008048.1 913565 914878 R amidohydrolase 2 complement(913565..914878) Sphingopyxis alaskensis RB2256 4082804 YP_615956.1 CDS Sala_0905 NC_008048.1 914982 915389 D hypothetical protein 914982..915389 Sphingopyxis alaskensis RB2256 4083115 YP_615957.1 CDS Sala_0906 NC_008048.1 915386 916570 D hypothetical protein 915386..916570 Sphingopyxis alaskensis RB2256 4083116 YP_615958.1 CDS Sala_0907 NC_008048.1 916574 917908 R amidohydrolase 3 complement(916574..917908) Sphingopyxis alaskensis RB2256 4083117 YP_615959.1 CDS Sala_0908 NC_008048.1 917908 918873 R hypothetical protein complement(917908..918873) Sphingopyxis alaskensis RB2256 4083118 YP_615960.1 CDS Sala_0909 NC_008048.1 918870 919853 R enoyl-CoA hydratase/isomerase complement(918870..919853) Sphingopyxis alaskensis RB2256 4083119 YP_615961.1 CDS Sala_0910 NC_008048.1 919864 921369 R AMP-dependent synthetase and ligase complement(919864..921369) Sphingopyxis alaskensis RB2256 4083120 YP_615962.1 CDS Sala_0911 NC_008048.1 921375 921683 R hypothetical protein complement(921375..921683) Sphingopyxis alaskensis RB2256 4083121 YP_615963.1 CDS Sala_0912 NC_008048.1 921799 923346 D AMP-dependent synthetase and ligase 921799..923346 Sphingopyxis alaskensis RB2256 4083122 YP_615964.1 CDS Sala_0913 NC_008048.1 923377 923934 D hypothetical protein 923377..923934 Sphingopyxis alaskensis RB2256 4083123 YP_615965.1 CDS Sala_0914 NC_008048.1 923955 926918 D TonB-dependent receptor 923955..926918 Sphingopyxis alaskensis RB2256 4083124 YP_615966.1 CDS Sala_0915 NC_008048.1 927028 928545 D tryptophan halogenase 927028..928545 Sphingopyxis alaskensis RB2256 4083125 YP_615967.1 CDS Sala_0916 NC_008048.1 928566 929282 D protein SapC protein 928566..929282 Sphingopyxis alaskensis RB2256 4083126 YP_615968.1 CDS Sala_0917 NC_008048.1 929329 930300 D PASs1-related protein 929329..930300 Sphingopyxis alaskensis RB2256 4083127 YP_615969.1 CDS Sala_0918 NC_008048.1 930297 931808 D tryptophan halogenase 930297..931808 Sphingopyxis alaskensis RB2256 4083128 YP_615970.1 CDS Sala_0919 NC_008048.1 931805 932752 D glucan endo-1,3-beta-D-glucosidase 931805..932752 Sphingopyxis alaskensis RB2256 4083129 YP_615971.1 CDS Sala_0920 NC_008048.1 932756 933811 D LacI family transcriptional regulator 932756..933811 Sphingopyxis alaskensis RB2256 4083130 YP_615972.1 CDS Sala_0921 NC_008048.1 933804 935012 D major facilitator superfamily transporter 933804..935012 Sphingopyxis alaskensis RB2256 4083131 YP_615973.1 CDS Sala_0922 NC_008048.1 935126 936097 R 2-nitropropane dioxygenase complement(935126..936097) Sphingopyxis alaskensis RB2256 4083132 YP_615974.1 CDS Sala_0923 NC_008048.1 936265 937488 R amidohydrolase complement(936265..937488) Sphingopyxis alaskensis RB2256 4083133 YP_615975.1 CDS pyrB NC_008048.1 937479 938513 R catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit complement(937479..938513) Sphingopyxis alaskensis RB2256 4080477 YP_615976.1 CDS Sala_0925 NC_008048.1 938653 939111 R Holliday junction resolvase YqgF complement(938653..939111) Sphingopyxis alaskensis RB2256 4080478 YP_615977.1 CDS uvrA NC_008048.1 939137 942040 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A complement(939137..942040) Sphingopyxis alaskensis RB2256 4080479 YP_615978.1 CDS Sala_0927 NC_008048.1 942145 943695 R BCCT transporter complement(942145..943695) Sphingopyxis alaskensis RB2256 4080480 YP_615979.1 CDS Sala_0928 NC_008048.1 943713 944207 D hypothetical protein 943713..944207 Sphingopyxis alaskensis RB2256 4080481 YP_615980.1 CDS Sala_0929 NC_008048.1 944932 945291 D hypothetical protein 944932..945291 Sphingopyxis alaskensis RB2256 4080482 YP_615981.1 CDS Sala_0930 NC_008048.1 945354 946085 R response regulator receiver protein complement(945354..946085) Sphingopyxis alaskensis RB2256 4080483 YP_615982.1 CDS Sala_0931 NC_008048.1 946085 947257 R signal transduction histidine kinase LytS complement(946085..947257) Sphingopyxis alaskensis RB2256 4080484 YP_615983.1 CDS Sala_0932 NC_008048.1 947359 950154 R valyl-tRNA synthetase complement(947359..950154) Sphingopyxis alaskensis RB2256 4080485 YP_615984.1 CDS Sala_0933 NC_008048.1 950317 952323 R peptidase S9, prolyl oligopeptidase active site region complement(950317..952323) Sphingopyxis alaskensis RB2256 4080486 YP_615985.1 CDS Sala_0934 NC_008048.1 952461 953051 D type IV pilus assembly PilZ 952461..953051 Sphingopyxis alaskensis RB2256 4080487 YP_615986.1 CDS Sala_0935 NC_008048.1 953089 954375 R amidohydrolase complement(953089..954375) Sphingopyxis alaskensis RB2256 4080488 YP_615987.1 CDS Sala_0936 NC_008048.1 954348 955256 R zinc metallopeptidase complement(954348..955256) Sphingopyxis alaskensis RB2256 4080489 YP_615988.1 CDS Sala_0937 NC_008048.1 955581 956738 D patatin 955581..956738 Sphingopyxis alaskensis RB2256 4080490 YP_615989.1 CDS Sala_0938 NC_008048.1 956765 957550 D 3-hydroxybutyrate dehydrogenase 956765..957550 Sphingopyxis alaskensis RB2256 4080491 YP_615990.1 CDS Sala_0939 NC_008048.1 957623 958267 D hypothetical protein 957623..958267 Sphingopyxis alaskensis RB2256 4080492 YP_615991.1 CDS Sala_0940 NC_008048.1 958282 959598 D peptidase M20D, amidohydrolase 958282..959598 Sphingopyxis alaskensis RB2256 4080493 YP_615992.1 CDS Sala_0941 NC_008048.1 959681 960454 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(959681..960454) Sphingopyxis alaskensis RB2256 4080494 YP_615993.1 CDS Sala_0942 NC_008048.1 960946 961932 D integral membrane protein TerC 960946..961932 Sphingopyxis alaskensis RB2256 4080495 YP_615994.1 CDS Sala_0943 NC_008048.1 962080 963672 R Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates; isocitrate lyase complement(962080..963672) Sphingopyxis alaskensis RB2256 4080496 YP_615995.1 CDS Sala_0944 NC_008048.1 963812 965200 D XRE family transcriptional regulator 963812..965200 Sphingopyxis alaskensis RB2256 4082443 YP_615996.1 CDS Sala_0945 NC_008048.1 965238 966263 R hypothetical protein complement(965238..966263) Sphingopyxis alaskensis RB2256 4082444 YP_615997.1 CDS Sala_0946 NC_008048.1 966467 967975 R PepSY-associated TM helix family protein complement(966467..967975) Sphingopyxis alaskensis RB2256 4082445 YP_615998.1 CDS Sala_0947 NC_008048.1 968400 970451 R TonB-dependent siderophore receptor complement(968400..970451) Sphingopyxis alaskensis RB2256 4082446 YP_615999.1 CDS Sala_0948 NC_008048.1 970619 972007 D undecaprenyl-phosphate galactosephosphotransferase 970619..972007 Sphingopyxis alaskensis RB2256 4082447 YP_616000.1 CDS Sala_0949 NC_008048.1 972009 974129 D sensor signal transduction histidine kinase 972009..974129 Sphingopyxis alaskensis RB2256 4082448 YP_616001.1 CDS Sala_0950 NC_008048.1 974126 975502 D two component, sigma54 specific, Fis family transcriptional regulator 974126..975502 Sphingopyxis alaskensis RB2256 4082449 YP_616002.1 CDS Sala_0951 NC_008048.1 975503 977344 D hypothetical protein 975503..977344 Sphingopyxis alaskensis RB2256 4082450 YP_616003.1 CDS Sala_0952 NC_008048.1 977505 977852 R GntR family transcriptional regulator complement(977505..977852) Sphingopyxis alaskensis RB2256 4082451 YP_616004.1 CDS Sala_0953 NC_008048.1 977924 978505 R nitroreductase complement(977924..978505) Sphingopyxis alaskensis RB2256 4082452 YP_616005.1 CDS Sala_0954 NC_008048.1 978688 980271 D amino acid/peptide transporter 978688..980271 Sphingopyxis alaskensis RB2256 4082453 YP_616006.1 CDS Sala_0955 NC_008048.1 980275 981687 D amidohydrolase 980275..981687 Sphingopyxis alaskensis RB2256 4082454 YP_616007.1 CDS Sala_0956 NC_008048.1 981825 983090 D hypothetical protein 981825..983090 Sphingopyxis alaskensis RB2256 4082455 YP_616008.1 CDS Sala_0957 NC_008048.1 983333 984034 D protein NnrU 983333..984034 Sphingopyxis alaskensis RB2256 4082456 YP_616009.1 CDS Sala_0958 NC_008048.1 984054 985049 R aldo/keto reductase complement(984054..985049) Sphingopyxis alaskensis RB2256 4082457 YP_616010.1 CDS Sala_0959 NC_008048.1 985046 986293 R sodium:dicarboxylate symporter complement(985046..986293) Sphingopyxis alaskensis RB2256 4082458 YP_616011.1 CDS glmM NC_008048.1 986460 987794 D catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 986460..987794 Sphingopyxis alaskensis RB2256 4082459 YP_616012.1 CDS Sala_0961 NC_008048.1 987824 988057 D hypothetical protein 987824..988057 Sphingopyxis alaskensis RB2256 4082460 YP_616013.1 CDS Sala_0962 NC_008048.1 988058 989206 D phosphomethylpyrimidine kinase 988058..989206 Sphingopyxis alaskensis RB2256 4082461 YP_616014.1 CDS rnhB NC_008048.1 989301 989897 D RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 989301..989897 Sphingopyxis alaskensis RB2256 4079963 YP_616015.1 CDS Sala_0964 NC_008048.1 989925 990821 D short-chain dehydrogenase/reductase SDR 989925..990821 Sphingopyxis alaskensis RB2256 4079964 YP_616016.1 CDS Sala_0965 NC_008048.1 991065 992204 D DNA methylase N-4/N-6 991065..992204 Sphingopyxis alaskensis RB2256 4079965 YP_616017.1 CDS Sala_0966 NC_008048.1 992319 993449 D dihydropteroate synthase 992319..993449 Sphingopyxis alaskensis RB2256 4079966 YP_616018.1 CDS Sala_0967 NC_008048.1 993446 993781 R ArsR family transcriptional regulator complement(993446..993781) Sphingopyxis alaskensis RB2256 4079967 YP_616019.1 CDS Sala_0968 NC_008048.1 993781 994434 R hypothetical protein complement(993781..994434) Sphingopyxis alaskensis RB2256 4079968 YP_616020.1 CDS Sala_0969 NC_008048.1 994533 995996 R two component, sigma54 specific, Fis family transcriptional regulator complement(994533..995996) Sphingopyxis alaskensis RB2256 4079969 YP_616021.1 CDS Sala_0971 NC_008048.1 996335 997456 D alanine dehydrogenase/PNT-like protein 996335..997456 Sphingopyxis alaskensis RB2256 4079970 YP_616022.1 CDS Sala_0972 NC_008048.1 997463 997828 D hypothetical protein 997463..997828 Sphingopyxis alaskensis RB2256 4079971 YP_616023.1 CDS Sala_0973 NC_008048.1 997927 998535 D beta-Ig-H3/fasciclin 997927..998535 Sphingopyxis alaskensis RB2256 4079972 YP_616024.1 CDS Sala_0974 NC_008048.1 998579 1000243 R 2-isopropylmalate synthase complement(998579..1000243) Sphingopyxis alaskensis RB2256 4079973 YP_616025.1 CDS Sala_0975 NC_008048.1 1000240 1000611 R hypothetical protein complement(1000240..1000611) Sphingopyxis alaskensis RB2256 4079974 YP_616026.1 CDS Sala_0976 NC_008048.1 1000692 1001333 R YceI protein complement(1000692..1001333) Sphingopyxis alaskensis RB2256 4079975 YP_616027.1 CDS Sala_0977 NC_008048.1 1001562 1002233 R hypothetical protein complement(1001562..1002233) Sphingopyxis alaskensis RB2256 4079976 YP_616028.1 CDS Sala_0978 NC_008048.1 1002509 1002805 R hypothetical protein complement(1002509..1002805) Sphingopyxis alaskensis RB2256 4079977 YP_616029.1 CDS Sala_0979 NC_008048.1 1003132 1005141 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD complement(1003132..1005141) Sphingopyxis alaskensis RB2256 4079978 YP_616030.1 CDS Sala_0980 NC_008048.1 1005177 1007054 R DNA primase complement(1005177..1007054) Sphingopyxis alaskensis RB2256 4079979 YP_616031.1 CDS Sala_0981 NC_008048.1 1007051 1007464 R excinuclease ABC subunit C complement(1007051..1007464) Sphingopyxis alaskensis RB2256 4079980 YP_616032.1 CDS Sala_0982 NC_008048.1 1007587 1008039 R hypothetical protein complement(1007587..1008039) Sphingopyxis alaskensis RB2256 4079981 YP_616033.1 CDS Sala_0983 NC_008048.1 1008171 1009442 D catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 1008171..1009442 Sphingopyxis alaskensis RB2256 4079982 YP_616034.1 CDS Sala_0984 NC_008048.1 1009442 1009906 D hypothetical protein 1009442..1009906 Sphingopyxis alaskensis RB2256 4081672 YP_616035.1 CDS carB NC_008048.1 1009907 1013227 D four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 1009907..1013227 Sphingopyxis alaskensis RB2256 4081673 YP_616036.1 CDS greA NC_008048.1 1013324 1013800 D necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 1013324..1013800 Sphingopyxis alaskensis RB2256 4081674 YP_616037.1 CDS Sala_0987 NC_008048.1 1013814 1014449 D rhomboid-like protein 1013814..1014449 Sphingopyxis alaskensis RB2256 4081675 YP_616038.1 CDS Sala_0988 NC_008048.1 1014542 1015090 R NUDIX hydrolase complement(1014542..1015090) Sphingopyxis alaskensis RB2256 4081676 YP_616039.1 CDS Sala_0989 NC_008048.1 1015092 1015778 R hypothetical protein complement(1015092..1015778) Sphingopyxis alaskensis RB2256 4081677 YP_616040.1 CDS Sala_0990 NC_008048.1 1015790 1016635 R hypothetical protein complement(1015790..1016635) Sphingopyxis alaskensis RB2256 4081678 YP_616041.1 CDS Sala_0991 NC_008048.1 1016637 1017239 R hypothetical protein complement(1016637..1017239) Sphingopyxis alaskensis RB2256 4081679 YP_616042.1 CDS mscL NC_008048.1 1017357 1017779 D homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel 1017357..1017779 Sphingopyxis alaskensis RB2256 4081680 YP_616043.1 CDS Sala_0993 NC_008048.1 1018327 1018740 R MerR family transcriptional regulator complement(1018327..1018740) Sphingopyxis alaskensis RB2256 4081681 YP_616044.1 CDS Sala_0994 NC_008048.1 1018809 1019432 D Co/Zn/Cd efflux system protein 1018809..1019432 Sphingopyxis alaskensis RB2256 4081682 YP_616045.1 CDS Sala_0995 NC_008048.1 1019446 1019937 D glyoxalase/bleomycin resistance protein/dioxygenase 1019446..1019937 Sphingopyxis alaskensis RB2256 4081683 YP_616046.1 CDS Sala_0996 NC_008048.1 1019934 1020185 R hypothetical protein complement(1019934..1020185) Sphingopyxis alaskensis RB2256 4081684 YP_616047.1 CDS Sala_0997 NC_008048.1 1020341 1020895 R beta-Ig-H3/fasciclin complement(1020341..1020895) Sphingopyxis alaskensis RB2256 4081685 YP_616048.1 CDS Sala_0998 NC_008048.1 1020991 1022364 R deoxyribodipyrimidine photolyase complement(1020991..1022364) Sphingopyxis alaskensis RB2256 4081686 YP_616049.1 CDS Sala_0999 NC_008048.1 1022361 1023323 R hypothetical protein complement(1022361..1023323) Sphingopyxis alaskensis RB2256 4081687 YP_616050.1 CDS Sala_1000 NC_008048.1 1023510 1024097 D LuxR family transcriptional regulator 1023510..1024097 Sphingopyxis alaskensis RB2256 4081688 YP_616051.1 CDS Sala_1001 NC_008048.1 1024300 1025082 R ABC transporter complement(1024300..1025082) Sphingopyxis alaskensis RB2256 4081689 YP_616052.1 CDS Sala_1002 NC_008048.1 1025076 1026077 R transport system permease complement(1025076..1026077) Sphingopyxis alaskensis RB2256 4081690 YP_616053.1 CDS Sala_1003 NC_008048.1 1026074 1026931 R periplasmic binding protein complement(1026074..1026931) Sphingopyxis alaskensis RB2256 4081691 YP_616054.1 CDS Sala_1004 NC_008048.1 1026974 1028830 R TonB-dependent receptor complement(1026974..1028830) Sphingopyxis alaskensis RB2256 4081692 YP_616055.1 CDS Sala_1005 NC_008048.1 1029325 1030485 R Acetyl-CoA C-acyltransferase complement(1029325..1030485) Sphingopyxis alaskensis RB2256 4081693 YP_616056.1 CDS Sala_1006 NC_008048.1 1030487 1031716 R Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase complement(1030487..1031716) Sphingopyxis alaskensis RB2256 4081694 YP_616057.1 CDS Sala_1007 NC_008048.1 1031852 1033567 R AMP-dependent synthetase and ligase complement(1031852..1033567) Sphingopyxis alaskensis RB2256 4081695 YP_616058.1 CDS Sala_1008 NC_008048.1 1033569 1035065 R carotenoid oxygenase complement(1033569..1035065) Sphingopyxis alaskensis RB2256 4081696 YP_616059.1 CDS Sala_1009 NC_008048.1 1035062 1036030 R 2-nitropropane dioxygenase complement(1035062..1036030) Sphingopyxis alaskensis RB2256 4081697 YP_616060.1 CDS Sala_1010 NC_008048.1 1036125 1038434 D TonB-dependent receptor 1036125..1038434 Sphingopyxis alaskensis RB2256 4081698 YP_616061.1 CDS Sala_1011 NC_008048.1 1038520 1039452 D HxlR family transcriptional regulator 1038520..1039452 Sphingopyxis alaskensis RB2256 4081699 YP_616062.1 CDS Sala_1012 NC_008048.1 1039457 1040686 R hypothetical protein complement(1039457..1040686) Sphingopyxis alaskensis RB2256 4081700 YP_616063.1 CDS Sala_1013 NC_008048.1 1040727 1042274 R sulfatase complement(1040727..1042274) Sphingopyxis alaskensis RB2256 4081701 YP_616064.1 CDS Sala_1014 NC_008048.1 1042291 1044609 R glycoside hydrolase complement(1042291..1044609) Sphingopyxis alaskensis RB2256 4081702 YP_616065.1 CDS Sala_1015 NC_008048.1 1044845 1047895 D TonB-dependent receptor 1044845..1047895 Sphingopyxis alaskensis RB2256 4081703 YP_616066.1 CDS Sala_1016 NC_008048.1 1047965 1049482 D hypothetical protein 1047965..1049482 Sphingopyxis alaskensis RB2256 4081704 YP_616067.1 CDS Sala_1017 NC_008048.1 1049490 1051643 R beta-galactosidase complement(1049490..1051643) Sphingopyxis alaskensis RB2256 4081705 YP_616068.1 CDS Sala_1018 NC_008048.1 1051646 1052515 R endonuclease/exonuclease/phosphatase complement(1051646..1052515) Sphingopyxis alaskensis RB2256 4081706 YP_616069.1 CDS Sala_1019 NC_008048.1 1052515 1053861 R Beta-glucosidase complement(1052515..1053861) Sphingopyxis alaskensis RB2256 4081707 YP_616070.1 CDS Sala_1020 NC_008048.1 1053858 1054640 R hypothetical protein complement(1053858..1054640) Sphingopyxis alaskensis RB2256 4081708 YP_616071.1 CDS Sala_1021 NC_008048.1 1054637 1055377 R binding-protein-dependent transport system inner membrane protein complement(1054637..1055377) Sphingopyxis alaskensis RB2256 4081709 YP_616072.1 CDS Sala_1022 NC_008048.1 1055449 1056333 R binding-protein-dependent transport system inner membrane protein complement(1055449..1056333) Sphingopyxis alaskensis RB2256 4081710 YP_616073.1 CDS Sala_1023 NC_008048.1 1056342 1057610 R extracellular solute-binding protein complement(1056342..1057610) Sphingopyxis alaskensis RB2256 4082306 YP_616074.1 CDS Sala_1024 NC_008048.1 1057627 1058655 R LacI family transcriptional regulator complement(1057627..1058655) Sphingopyxis alaskensis RB2256 4082307 YP_616075.1 CDS Sala_1025 NC_008048.1 1058768 1059856 R ABC transporter complement(1058768..1059856) Sphingopyxis alaskensis RB2256 4082308 YP_616076.1 CDS Sala_1026 NC_008048.1 1059882 1060145 R hypothetical protein complement(1059882..1060145) Sphingopyxis alaskensis RB2256 4082309 YP_616077.1 CDS Sala_1027 NC_008048.1 1060403 1061860 D inosine-5'-monophosphate dehydrogenase 1060403..1061860 Sphingopyxis alaskensis RB2256 4082310 YP_616078.1 CDS Sala_1028 NC_008048.1 1062032 1063222 D hypothetical protein 1062032..1063222 Sphingopyxis alaskensis RB2256 4082311 YP_616079.1 CDS Sala_1029 NC_008048.1 1063255 1063785 D hypothetical protein 1063255..1063785 Sphingopyxis alaskensis RB2256 4082312 YP_616080.1 CDS Sala_1030 NC_008048.1 1064200 1065183 R peptidyl-arginine deiminase complement(1064200..1065183) Sphingopyxis alaskensis RB2256 4082313 YP_616081.1 CDS Sala_1031 NC_008048.1 1065202 1066893 R peptidase M28 complement(1065202..1066893) Sphingopyxis alaskensis RB2256 4082314 YP_616082.1 CDS Sala_1032 NC_008048.1 1067504 1068319 D oxidoreductase FAD/NAD(P)-binding protein 1067504..1068319 Sphingopyxis alaskensis RB2256 4082315 YP_616083.1 CDS Sala_1033 NC_008048.1 1068389 1069021 D phospholipid/glycerol acyltransferase 1068389..1069021 Sphingopyxis alaskensis RB2256 4082316 YP_616084.1 CDS Sala_1034 NC_008048.1 1069018 1069827 D hypothetical protein 1069018..1069827 Sphingopyxis alaskensis RB2256 4082317 YP_616085.1 CDS Sala_1035 NC_008048.1 1069803 1070207 D hypothetical protein 1069803..1070207 Sphingopyxis alaskensis RB2256 4082318 YP_616086.1 CDS Sala_1036 NC_008048.1 1070273 1071163 R hypothetical protein complement(1070273..1071163) Sphingopyxis alaskensis RB2256 4082319 YP_616087.1 CDS Sala_1037 NC_008048.1 1071275 1071814 R (2Fe-2S)-binding protein complement(1071275..1071814) Sphingopyxis alaskensis RB2256 4082320 YP_616088.1 CDS Sala_1038 NC_008048.1 1071842 1072606 R aldolase II superfamily protein complement(1071842..1072606) Sphingopyxis alaskensis RB2256 4082321 YP_616089.1 CDS rpsU NC_008048.1 1072884 1073090 D a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 1072884..1073090 Sphingopyxis alaskensis RB2256 4082322 YP_616090.1 CDS Sala_1040 NC_008048.1 1073289 1074218 R 2OG-Fe(II) oxygenase complement(1073289..1074218) Sphingopyxis alaskensis RB2256 4082323 YP_616091.1 CDS Sala_1041 NC_008048.1 1074350 1074775 D hypothetical protein 1074350..1074775 Sphingopyxis alaskensis RB2256 4082324 YP_616092.1 CDS Sala_1042 NC_008048.1 1074814 1075239 R type IV pilus assembly PilZ complement(1074814..1075239) Sphingopyxis alaskensis RB2256 4080767 YP_616093.1 CDS Sala_1043 NC_008048.1 1075761 1076444 R pseudouridine synthase complement(1075761..1076444) Sphingopyxis alaskensis RB2256 4080768 YP_616094.1 CDS Sala_1044 NC_008048.1 1076498 1077640 R cell wall hydrolase SleB complement(1076498..1077640) Sphingopyxis alaskensis RB2256 4080769 YP_616095.1 CDS Sala_1045 NC_008048.1 1077650 1078570 R cysteine synthase complement(1077650..1078570) Sphingopyxis alaskensis RB2256 4080770 YP_616096.1 CDS Sala_1046 NC_008048.1 1078567 1079880 R major facilitator superfamily transporter complement(1078567..1079880) Sphingopyxis alaskensis RB2256 4080771 YP_616097.1 CDS Sala_1047 NC_008048.1 1080233 1081546 R hypothetical protein complement(1080233..1081546) Sphingopyxis alaskensis RB2256 4080772 YP_616098.1 CDS Sala_1048 NC_008048.1 1081853 1082632 R protein SapC protein complement(1081853..1082632) Sphingopyxis alaskensis RB2256 4080773 YP_616099.1 CDS Sala_1049 NC_008048.1 1082741 1084165 R FAD linked oxidase-like protein complement(1082741..1084165) Sphingopyxis alaskensis RB2256 4080774 YP_616100.1 CDS Sala_1050 NC_008048.1 1084354 1084872 D hypothetical protein 1084354..1084872 Sphingopyxis alaskensis RB2256 4080775 YP_616101.1 CDS Sala_1051 NC_008048.1 1084987 1086363 D DEAD/DEAH box helicase 1084987..1086363 Sphingopyxis alaskensis RB2256 4080776 YP_616102.1 CDS Sala_1052 NC_008048.1 1086470 1086712 R hypothetical protein complement(1086470..1086712) Sphingopyxis alaskensis RB2256 4080777 YP_616103.1 CDS Sala_1053 NC_008048.1 1086847 1087341 D transposase, IS4 1086847..1087341 Sphingopyxis alaskensis RB2256 4080778 YP_616104.1 CDS Sala_1054 NC_008048.1 1087421 1088371 D integrase catalytic subunit 1087421..1088371 Sphingopyxis alaskensis RB2256 4080779 YP_616105.1 CDS Sala_1055 NC_008048.1 1088368 1089381 R zinc-binding alcohol dehydrogenase complement(1088368..1089381) Sphingopyxis alaskensis RB2256 4080780 YP_616106.1 CDS Sala_1056 NC_008048.1 1089732 1090289 D rare lipoprotein A 1089732..1090289 Sphingopyxis alaskensis RB2256 4080782 YP_616107.1 CDS Sala_1057 NC_008048.1 1090286 1090828 R hypothetical protein complement(1090286..1090828) Sphingopyxis alaskensis RB2256 4080783 YP_616108.1 CDS Sala_1058 NC_008048.1 1090825 1091682 R pseudouridine synthase, Rsu complement(1090825..1091682) Sphingopyxis alaskensis RB2256 4080784 YP_616109.1 CDS Sala_1059 NC_008048.1 1091838 1092275 D response regulator receiver protein 1091838..1092275 Sphingopyxis alaskensis RB2256 4080785 YP_616110.1 CDS Sala_1060 NC_008048.1 1092389 1093792 D major facilitator superfamily transporter 1092389..1093792 Sphingopyxis alaskensis RB2256 4082325 YP_616111.1 CDS Sala_1061 NC_008048.1 1093797 1095128 R bifunctional folylpolyglutamate synthase/dihydrofolate synthase complement(1093797..1095128) Sphingopyxis alaskensis RB2256 4082326 YP_616112.1 CDS Sala_1062 NC_008048.1 1095255 1096106 R acetyl-CoA carboxylase, carboxyl transferase subunit beta complement(1095255..1096106) Sphingopyxis alaskensis RB2256 4082327 YP_616113.1 CDS trpA NC_008048.1 1096103 1096897 R catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha complement(1096103..1096897) Sphingopyxis alaskensis RB2256 4082328 YP_616114.1 CDS Sala_1064 NC_008048.1 1097097 1098329 R catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta complement(1097097..1098329) Sphingopyxis alaskensis RB2256 4082329 YP_616115.1 CDS Sala_1065 NC_008048.1 1098420 1099061 R phosphoribosylanthranilate isomerase complement(1098420..1099061) Sphingopyxis alaskensis RB2256 4082330 YP_616116.1 CDS Sala_1066 NC_008048.1 1099191 1099865 R orotidine 5'-phosphate decarboxylase complement(1099191..1099865) Sphingopyxis alaskensis RB2256 4082331 YP_616117.1 CDS Sala_1067 NC_008048.1 1099862 1100275 R hypothetical protein complement(1099862..1100275) Sphingopyxis alaskensis RB2256 4082332 YP_616118.1 CDS Sala_1068 NC_008048.1 1100283 1101599 R Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase complement(1100283..1101599) Sphingopyxis alaskensis RB2256 4082333 YP_616119.1 CDS Sala_1069 NC_008048.1 1101797 1102261 D calcium-binding EF-hand 1101797..1102261 Sphingopyxis alaskensis RB2256 4082334 YP_616120.1 CDS Sala_1070 NC_008048.1 1102414 1103232 R DNA repair protein RadC complement(1102414..1103232) Sphingopyxis alaskensis RB2256 4082335 YP_616121.1 CDS Sala_1071 NC_008048.1 1103376 1103789 D hypothetical protein 1103376..1103789 Sphingopyxis alaskensis RB2256 4082336 YP_616122.1 CDS Sala_1072 NC_008048.1 1103920 1106475 D hypothetical protein 1103920..1106475 Sphingopyxis alaskensis RB2256 4082337 YP_616123.1 CDS Sala_1073 NC_008048.1 1106538 1106684 D hypothetical protein 1106538..1106684 Sphingopyxis alaskensis RB2256 4082338 YP_616124.1 CDS Sala_1074 NC_008048.1 1106699 1107103 D hypothetical protein 1106699..1107103 Sphingopyxis alaskensis RB2256 4082339 YP_616125.1 CDS Sala_1075 NC_008048.1 1107316 1107636 D FoF1 ATP synthase subunit I 1107316..1107636 Sphingopyxis alaskensis RB2256 4082340 YP_616126.1 CDS Sala_1076 NC_008048.1 1107705 1108490 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 1107705..1108490 Sphingopyxis alaskensis RB2256 4082341 YP_616127.1 CDS Sala_1077 NC_008048.1 1108531 1108758 D H+-transporting two-sector ATPase subunit C 1108531..1108758 Sphingopyxis alaskensis RB2256 4082342 YP_616128.1 CDS Sala_1078 NC_008048.1 1108838 1109338 D H+-transporting two-sector ATPase subunit B/B' 1108838..1109338 Sphingopyxis alaskensis RB2256 4082343 YP_616129.1 CDS Sala_1079 NC_008048.1 1109331 1109861 D H+-transporting two-sector ATPase subunit B/B' 1109331..1109861 Sphingopyxis alaskensis RB2256 4081554 YP_616130.1 CDS Sala_1080 NC_008048.1 1109831 1110097 R hypothetical protein complement(1109831..1110097) Sphingopyxis alaskensis RB2256 4081555 YP_616131.1 CDS Sala_1081 NC_008048.1 1110108 1110860 R short-chain dehydrogenase/reductase SDR complement(1110108..1110860) Sphingopyxis alaskensis RB2256 4081556 YP_616132.1 CDS uvrC NC_008048.1 1110898 1112832 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 1110898..1112832 Sphingopyxis alaskensis RB2256 4081557 YP_616133.1 CDS Sala_1083 NC_008048.1 1112933 1113331 D phenylacetic acid degradation-related protein 1112933..1113331 Sphingopyxis alaskensis RB2256 4081558 YP_616134.1 CDS Sala_1084 NC_008048.1 1113355 1113933 D recombinational DNA repair protein (RecF pathway)-like protein 1113355..1113933 Sphingopyxis alaskensis RB2256 4081559 YP_616135.1 CDS Sala_1085 NC_008048.1 1114103 1115149 D 3-isopropylmalate dehydrogenase 1114103..1115149 Sphingopyxis alaskensis RB2256 4081560 YP_616136.1 CDS Sala_1086 NC_008048.1 1115155 1116360 D cystathionine gamma-synthase 1115155..1116360 Sphingopyxis alaskensis RB2256 4081561 YP_616137.1 CDS apaG NC_008048.1 1116378 1116779 D protein associated with Co2+ and Mg2+ efflux; ApaG protein 1116378..1116779 Sphingopyxis alaskensis RB2256 4081562 YP_616138.1 CDS Sala_1088 NC_008048.1 1116776 1117567 D LysR family transcriptional regulator 1116776..1117567 Sphingopyxis alaskensis RB2256 4081563 YP_616139.1 CDS Sala_1089 NC_008048.1 1117577 1117930 D hypothetical protein 1117577..1117930 Sphingopyxis alaskensis RB2256 4081564 YP_616140.1 CDS Sala_1090 NC_008048.1 1117927 1119258 R putative beta-lactamase complement(1117927..1119258) Sphingopyxis alaskensis RB2256 4081565 YP_616141.1 CDS Sala_1091 NC_008048.1 1119311 1121290 R decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B complement(1119311..1121290) Sphingopyxis alaskensis RB2256 4081566 YP_616142.1 CDS Sala_1092 NC_008048.1 1121459 1122292 D membrane protein 1121459..1122292 Sphingopyxis alaskensis RB2256 4081567 YP_616143.1 CDS Sala_1093 NC_008048.1 1122345 1122743 R phenylacetic acid degradation-related protein complement(1122345..1122743) Sphingopyxis alaskensis RB2256 4081568 YP_616144.1 CDS Sala_1094 NC_008048.1 1122753 1123445 R GcrA cell cycle regulator complement(1122753..1123445) Sphingopyxis alaskensis RB2256 4081569 YP_616145.1 CDS Sala_1095 NC_008048.1 1123565 1124437 D hypothetical protein 1123565..1124437 Sphingopyxis alaskensis RB2256 4081570 YP_616146.1 CDS Sala_1096 NC_008048.1 1124446 1124820 R hemimethylated DNA-binding region complement(1124446..1124820) Sphingopyxis alaskensis RB2256 4081571 YP_616147.1 CDS Sala_1097 NC_008048.1 1124996 1125625 D hypothetical protein 1124996..1125625 Sphingopyxis alaskensis RB2256 4081572 YP_616148.1 CDS Sala_1098 NC_008048.1 1125857 1129093 R amidohydrolase complement(1125857..1129093) Sphingopyxis alaskensis RB2256 4082036 YP_616149.1 CDS Sala_1099 NC_008048.1 1129237 1130415 D L-carnitine dehydratase/bile acid-inducible protein F 1129237..1130415 Sphingopyxis alaskensis RB2256 4082037 YP_616150.1 CDS Sala_1100 NC_008048.1 1130492 1131373 D YghU; B2989; one of eight putative glutathione transferase proteins from E. coli; putative glutathione S-transferase YghU 1130492..1131373 Sphingopyxis alaskensis RB2256 4082038 YP_616151.1 CDS Sala_1101 NC_008048.1 1131537 1131980 D TadE-like protein 1131537..1131980 Sphingopyxis alaskensis RB2256 4082039 YP_616152.1 CDS Sala_1102 NC_008048.1 1131983 1133611 D hypothetical protein 1131983..1133611 Sphingopyxis alaskensis RB2256 4082040 YP_616153.1 CDS Sala_1103 NC_008048.1 1133732 1134628 D putative PAS/PAC sensor protein 1133732..1134628 Sphingopyxis alaskensis RB2256 4082041 YP_616154.1 CDS Sala_1104 NC_008048.1 1134779 1135972 D acyl-CoA dehydrogenase-like protein 1134779..1135972 Sphingopyxis alaskensis RB2256 4082042 YP_616155.1 CDS Sala_1105 NC_008048.1 1136079 1137218 D acyl-CoA dehydrogenase-like protein 1136079..1137218 Sphingopyxis alaskensis RB2256 4082043 YP_616156.1 CDS Sala_1106 NC_008048.1 1137522 1140011 R TonB-dependent receptor complement(1137522..1140011) Sphingopyxis alaskensis RB2256 4082044 YP_616157.1 CDS Sala_1107 NC_008048.1 1140014 1140949 R putative FecR protein complement(1140014..1140949) Sphingopyxis alaskensis RB2256 4082045 YP_616158.1 CDS Sala_1108 NC_008048.1 1140939 1141460 R ECF subfamily RNA polymerase sigma-24 factor complement(1140939..1141460) Sphingopyxis alaskensis RB2256 4082046 YP_616159.1 CDS Sala_1109 NC_008048.1 1141695 1144910 R autotransporter beta-domain-containing protein complement(1141695..1144910) Sphingopyxis alaskensis RB2256 4082047 YP_616160.1 CDS Sala_1110 NC_008048.1 1145105 1146076 D glucokinase 1145105..1146076 Sphingopyxis alaskensis RB2256 4082048 YP_616161.1 CDS Sala_1111 NC_008048.1 1146120 1146860 D peptidase C26 1146120..1146860 Sphingopyxis alaskensis RB2256 4082049 YP_616162.1 CDS Sala_1113 NC_008048.1 1148501 1149436 D hypothetical protein 1148501..1149436 Sphingopyxis alaskensis RB2256 4082051 YP_616163.1 CDS Sala_1114 NC_008048.1 1149569 1150699 R spermidine/putrescine ABC transporter ATP-binding subunit complement(1149569..1150699) Sphingopyxis alaskensis RB2256 4082052 YP_616164.1 CDS Sala_1115 NC_008048.1 1150702 1151547 R binding-protein-dependent transport system inner membrane protein complement(1150702..1151547) Sphingopyxis alaskensis RB2256 4082053 YP_616165.1 CDS Sala_1116 NC_008048.1 1151544 1152449 R binding-protein-dependent transport system inner membrane protein complement(1151544..1152449) Sphingopyxis alaskensis RB2256 4081476 YP_616166.1 CDS Sala_1117 NC_008048.1 1152471 1153577 R extracellular solute-binding protein complement(1152471..1153577) Sphingopyxis alaskensis RB2256 4081477 YP_616167.1 CDS Sala_1118 NC_008048.1 1153670 1155061 R glutamate--ammonia ligase complement(1153670..1155061) Sphingopyxis alaskensis RB2256 4081478 YP_616168.1 CDS Sala_1119 NC_008048.1 1155069 1156412 R aminotransferase complement(1155069..1156412) Sphingopyxis alaskensis RB2256 4081479 YP_616169.1 CDS Sala_1120 NC_008048.1 1156409 1157674 R FAD dependent oxidoreductase complement(1156409..1157674) Sphingopyxis alaskensis RB2256 4081480 YP_616170.1 CDS Sala_1121 NC_008048.1 1157794 1159140 R glutamate--ammonia ligase complement(1157794..1159140) Sphingopyxis alaskensis RB2256 4081481 YP_616171.1 CDS Sala_1122 NC_008048.1 1159295 1160611 D catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate; beta alanine--pyruvate transaminase 1159295..1160611 Sphingopyxis alaskensis RB2256 4081482 YP_616172.1 CDS Sala_1123 NC_008048.1 1160608 1162056 R sensor signal transduction histidine kinase complement(1160608..1162056) Sphingopyxis alaskensis RB2256 4081483 YP_616173.1 CDS Sala_1124 NC_008048.1 1162461 1163462 D fumarylacetoacetate (FAA) hydrolase 1162461..1163462 Sphingopyxis alaskensis RB2256 4081484 YP_616174.1 CDS Sala_1125 NC_008048.1 1163525 1164568 R type II secretion system protein complement(1163525..1164568) Sphingopyxis alaskensis RB2256 4081485 YP_616175.1 CDS Sala_1126 NC_008048.1 1164582 1165514 R type II secretion system protein complement(1164582..1165514) Sphingopyxis alaskensis RB2256 4081486 YP_616176.1 CDS Sala_1127 NC_008048.1 1165611 1166879 R response regulator receiver protein complement(1165611..1166879) Sphingopyxis alaskensis RB2256 4081487 YP_616177.1 CDS Sala_1128 NC_008048.1 1166876 1167517 R hypothetical protein complement(1166876..1167517) Sphingopyxis alaskensis RB2256 4081488 YP_616178.1 CDS Sala_1129 NC_008048.1 1167543 1169024 R type II and III secretion system protein complement(1167543..1169024) Sphingopyxis alaskensis RB2256 4081489 YP_616179.1 CDS Sala_1130 NC_008048.1 1169026 1170063 R Flp pilus assembly CpaB complement(1169026..1170063) Sphingopyxis alaskensis RB2256 4081490 YP_616180.1 CDS Sala_1131 NC_008048.1 1170111 1170599 R peptidase A24A, prepilin type IV complement(1170111..1170599) Sphingopyxis alaskensis RB2256 4081491 YP_616181.1 CDS Sala_1132 NC_008048.1 1170695 1171825 D FAD dependent oxidoreductase 1170695..1171825 Sphingopyxis alaskensis RB2256 4081492 YP_616182.1 CDS Sala_1133 NC_008048.1 1171836 1172087 D hypothetical protein 1171836..1172087 Sphingopyxis alaskensis RB2256 4081493 YP_616183.1 CDS Sala_1134 NC_008048.1 1172105 1172557 R ribonuclease H complement(1172105..1172557) Sphingopyxis alaskensis RB2256 4081494 YP_616184.1 CDS Sala_1135 NC_008048.1 1172554 1173516 R homoserine kinase complement(1172554..1173516) Sphingopyxis alaskensis RB2256 4081495 YP_616185.1 CDS Sala_1136 NC_008048.1 1173516 1174496 R hydroxymethylbutenyl pyrophosphate reductase complement(1173516..1174496) Sphingopyxis alaskensis RB2256 4080881 YP_616186.1 CDS Sala_1137 NC_008048.1 1174645 1175316 D hypothetical protein 1174645..1175316 Sphingopyxis alaskensis RB2256 4080882 YP_616187.1 CDS argS NC_008048.1 1175449 1177176 D catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 1175449..1177176 Sphingopyxis alaskensis RB2256 4080883 YP_616188.1 CDS Sala_1139 NC_008048.1 1177176 1177904 D sporulation-like protein 1177176..1177904 Sphingopyxis alaskensis RB2256 4080884 YP_616189.1 CDS Sala_1140 NC_008048.1 1178013 1179020 D beta-N-acetylhexosaminidase 1178013..1179020 Sphingopyxis alaskensis RB2256 4080885 YP_616190.1 CDS Sala_1141 NC_008048.1 1178998 1179810 D chromosome segregation and condensation protein ScpA 1178998..1179810 Sphingopyxis alaskensis RB2256 4080886 YP_616191.1 CDS Sala_1142 NC_008048.1 1179807 1180400 D putative transcriptional regulator 1179807..1180400 Sphingopyxis alaskensis RB2256 4080887 YP_616192.1 CDS tatA NC_008048.1 1180426 1180659 D TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin arginine translocase protein A 1180426..1180659 Sphingopyxis alaskensis RB2256 4080888 YP_616193.1 CDS Sala_1144 NC_008048.1 1180692 1181069 D twin-arginine translocation protein TatB 1180692..1181069 Sphingopyxis alaskensis RB2256 4080889 YP_616194.1 CDS Sala_1145 NC_008048.1 1181066 1181875 D Sec-independent protein translocase TatC 1181066..1181875 Sphingopyxis alaskensis RB2256 4080890 YP_616195.1 CDS Sala_1146 NC_008048.1 1181893 1182189 R entericidin EcnAB complement(1181893..1182189) Sphingopyxis alaskensis RB2256 4080891 YP_616196.1 CDS Sala_1147 NC_008048.1 1182257 1183696 R magnesium transporter complement(1182257..1183696) Sphingopyxis alaskensis RB2256 4080892 YP_616197.1 CDS Sala_1148 NC_008048.1 1183856 1184302 D cyclophilin type peptidyl-prolyl cis-trans isomerase 1183856..1184302 Sphingopyxis alaskensis RB2256 4080893 YP_616198.1 CDS Sala_1149 NC_008048.1 1184498 1185634 R 2-nitropropane dioxygenase complement(1184498..1185634) Sphingopyxis alaskensis RB2256 4080894 YP_616199.1 CDS Sala_1150 NC_008048.1 1185928 1186845 D nicotinate-nucleotide pyrophosphorylase 1185928..1186845 Sphingopyxis alaskensis RB2256 4080895 YP_616200.1 CDS Sala_1151 NC_008048.1 1186832 1187554 D ribonuclease T2 1186832..1187554 Sphingopyxis alaskensis RB2256 4080896 YP_616201.1 CDS Sala_1152 NC_008048.1 1187645 1187869 D hypothetical protein 1187645..1187869 Sphingopyxis alaskensis RB2256 4080897 YP_616202.1 CDS Sala_1153 NC_008048.1 1188048 1189343 R major facilitator superfamily transporter complement(1188048..1189343) Sphingopyxis alaskensis RB2256 4080898 YP_616203.1 CDS Sala_1154 NC_008048.1 1189458 1190045 D CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1189458..1190045 Sphingopyxis alaskensis RB2256 4080899 YP_616204.1 CDS Sala_1155 NC_008048.1 1190045 1190302 D molybdopterin converting factor subunit 1 1190045..1190302 Sphingopyxis alaskensis RB2256 4080861 YP_616205.1 CDS Sala_1156 NC_008048.1 1190299 1190739 D molybdopterin biosynthesis MoaE 1190299..1190739 Sphingopyxis alaskensis RB2256 4080862 YP_616206.1 CDS Sala_1157 NC_008048.1 1190798 1191778 R LysR family transcriptional regulator complement(1190798..1191778) Sphingopyxis alaskensis RB2256 4080863 YP_616207.1 CDS Sala_1158 NC_008048.1 1191839 1192306 D hypothetical protein 1191839..1192306 Sphingopyxis alaskensis RB2256 4080864 YP_616208.1 CDS Sala_1159 NC_008048.1 1192406 1193755 R TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine; tRNA (uracil-5-)-methyltransferase Gid complement(1192406..1193755) Sphingopyxis alaskensis RB2256 4080865 YP_616209.1 CDS Sala_1160 NC_008048.1 1193831 1194502 D YjeF-like protein 1193831..1194502 Sphingopyxis alaskensis RB2256 4080866 YP_616210.1 CDS Sala_1161 NC_008048.1 1194499 1195344 R taurine catabolism dioxygenase TauD/TfdA complement(1194499..1195344) Sphingopyxis alaskensis RB2256 4080867 YP_616211.1 CDS Sala_1162 NC_008048.1 1195428 1196015 D alkyl hydroperoxide reductase 1195428..1196015 Sphingopyxis alaskensis RB2256 4080868 YP_616212.1 CDS Sala_1163 NC_008048.1 1196047 1196358 R hypothetical protein complement(1196047..1196358) Sphingopyxis alaskensis RB2256 4080869 YP_616213.1 CDS Sala_1164 NC_008048.1 1196355 1199060 R negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A complement(1196355..1199060) Sphingopyxis alaskensis RB2256 4080870 YP_616214.1 CDS Sala_1165 NC_008048.1 1199164 1199889 R short-chain dehydrogenase/reductase SDR complement(1199164..1199889) Sphingopyxis alaskensis RB2256 4080871 YP_616215.1 CDS Sala_1166 NC_008048.1 1199913 1201196 D hypothetical protein 1199913..1201196 Sphingopyxis alaskensis RB2256 4080872 YP_616216.1 CDS Sala_1167 NC_008048.1 1201255 1202166 D hypothetical protein 1201255..1202166 Sphingopyxis alaskensis RB2256 4080873 YP_616217.1 CDS Sala_1168 NC_008048.1 1202163 1203533 D histidine kinase 1202163..1203533 Sphingopyxis alaskensis RB2256 4080874 YP_616218.1 CDS Sala_1169 NC_008048.1 1203705 1204388 R Crp/FNR family transcriptional regulator complement(1203705..1204388) Sphingopyxis alaskensis RB2256 4080875 YP_616219.1 CDS pyrG NC_008048.1 1204407 1206038 R CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase complement(1204407..1206038) Sphingopyxis alaskensis RB2256 4080876 YP_616220.1 CDS Sala_1171 NC_008048.1 1206147 1206611 R preprotein translocase subunit SecG complement(1206147..1206611) Sphingopyxis alaskensis RB2256 4080877 YP_616221.1 CDS Sala_1172 NC_008048.1 1206815 1207561 R triosephosphate isomerase complement(1206815..1207561) Sphingopyxis alaskensis RB2256 4080878 YP_616222.1 CDS Sala_1173 NC_008048.1 1207666 1209687 D hypothetical protein 1207666..1209687 Sphingopyxis alaskensis RB2256 4080879 YP_616223.1 CDS Sala_1174 NC_008048.1 1209690 1211207 D anthranilate synthase component I 1209690..1211207 Sphingopyxis alaskensis RB2256 4080880 YP_616224.1 CDS Sala_1175 NC_008048.1 1211576 1212826 D LolC/E family lipoprotein releasing system, transmembrane protein 1211576..1212826 Sphingopyxis alaskensis RB2256 4080823 YP_616225.1 CDS Sala_1176 NC_008048.1 1212819 1213496 D ABC transporter 1212819..1213496 Sphingopyxis alaskensis RB2256 4080824 YP_616226.1 CDS Sala_1177 NC_008048.1 1213526 1214125 D hypothetical protein 1213526..1214125 Sphingopyxis alaskensis RB2256 4080825 YP_616227.1 CDS Sala_1178 NC_008048.1 1214127 1214603 D glutathione peroxidase 1214127..1214603 Sphingopyxis alaskensis RB2256 4080826 YP_616228.1 CDS Sala_1179 NC_008048.1 1214764 1218252 D DNA polymerase III subunit alpha 1214764..1218252 Sphingopyxis alaskensis RB2256 4080827 YP_616229.1 CDS Sala_1180 NC_008048.1 1218331 1219935 D AMP-dependent synthetase and ligase 1218331..1219935 Sphingopyxis alaskensis RB2256 4080828 YP_616230.1 CDS Sala_1181 NC_008048.1 1219980 1221068 R radical SAM family protein complement(1219980..1221068) Sphingopyxis alaskensis RB2256 4080829 YP_616231.1 CDS Sala_1182 NC_008048.1 1221115 1221639 R molybdenum cofactor biosynthesis protein complement(1221115..1221639) Sphingopyxis alaskensis RB2256 4080830 YP_616232.1 CDS Sala_1183 NC_008048.1 1221629 1223395 R lytic transglycosylase, catalytic complement(1221629..1223395) Sphingopyxis alaskensis RB2256 4080831 YP_616233.1 CDS Sala_1184 NC_008048.1 1223400 1224188 R uracil-DNA glycosylase superfamily protein complement(1223400..1224188) Sphingopyxis alaskensis RB2256 4080832 YP_616234.1 CDS Sala_1185 NC_008048.1 1224308 1225963 D electron-transferring-flavoprotein dehydrogenase 1224308..1225963 Sphingopyxis alaskensis RB2256 4080833 YP_616235.1 CDS Sala_1186 NC_008048.1 1226160 1227608 D hypothetical protein 1226160..1227608 Sphingopyxis alaskensis RB2256 4080834 YP_616236.1 CDS Sala_1187 NC_008048.1 1227605 1228456 D An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 1227605..1228456 Sphingopyxis alaskensis RB2256 4080835 YP_616237.1 CDS Sala_1188 NC_008048.1 1228453 1229184 D N-formylglutamate amidohydrolase 1228453..1229184 Sphingopyxis alaskensis RB2256 4080836 YP_616238.1 CDS Sala_1189 NC_008048.1 1229244 1231103 D catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 1229244..1231103 Sphingopyxis alaskensis RB2256 4080837 YP_616239.1 CDS Sala_1190 NC_008048.1 1231100 1231462 D hypothetical protein 1231100..1231462 Sphingopyxis alaskensis RB2256 4080838 YP_616240.1 CDS Sala_1191 NC_008048.1 1231499 1232848 D YjeF-related protein-like protein 1231499..1232848 Sphingopyxis alaskensis RB2256 4080839 YP_616241.1 CDS Sala_1192 NC_008048.1 1232850 1234049 D (uracil-5)-methyltransferase 1232850..1234049 Sphingopyxis alaskensis RB2256 4080840 YP_616242.1 CDS Sala_1193 NC_008048.1 1234050 1234484 R hypothetical protein complement(1234050..1234484) Sphingopyxis alaskensis RB2256 4080841 YP_616243.1 CDS Sala_1194 NC_008048.1 1234495 1234926 R hypothetical protein complement(1234495..1234926) Sphingopyxis alaskensis RB2256 4080689 YP_616244.1 CDS Sala_1195 NC_008048.1 1234974 1236143 R L-carnitine dehydratase/bile acid-inducible protein F complement(1234974..1236143) Sphingopyxis alaskensis RB2256 4080690 YP_616245.1 CDS Sala_1196 NC_008048.1 1236229 1237602 R major facilitator superfamily transporter complement(1236229..1237602) Sphingopyxis alaskensis RB2256 4080691 YP_616246.1 CDS Sala_1197 NC_008048.1 1237642 1238835 R Orn/DAP/Arg decarboxylase 2 complement(1237642..1238835) Sphingopyxis alaskensis RB2256 4080692 YP_616247.1 CDS Sala_1198 NC_008048.1 1239058 1240230 R Orn/DAP/Arg decarboxylase 2 complement(1239058..1240230) Sphingopyxis alaskensis RB2256 4080693 YP_616248.1 CDS Sala_1199 NC_008048.1 1240249 1240599 R hypothetical protein complement(1240249..1240599) Sphingopyxis alaskensis RB2256 4080694 YP_616249.1 CDS Sala_1200 NC_008048.1 1240596 1241690 R alpha/beta hydrolase complement(1240596..1241690) Sphingopyxis alaskensis RB2256 4080695 YP_616250.1 CDS Sala_1201 NC_008048.1 1241820 1243028 R saccharopine dehydrogenase complement(1241820..1243028) Sphingopyxis alaskensis RB2256 4080696 YP_616251.1 CDS Sala_1202 NC_008048.1 1243095 1244096 D pyridoxal-5'-phosphate-dependent protein subunit beta 1243095..1244096 Sphingopyxis alaskensis RB2256 4080697 YP_616252.1 CDS Sala_1203 NC_008048.1 1244143 1244577 D hypothetical protein 1244143..1244577 Sphingopyxis alaskensis RB2256 4080698 YP_616253.1 CDS Sala_1204 NC_008048.1 1244700 1245965 R YcfA-like protein complement(1244700..1245965) Sphingopyxis alaskensis RB2256 4080699 YP_616254.1 CDS Sala_1205 NC_008048.1 1246052 1246741 R nitroreductase complement(1246052..1246741) Sphingopyxis alaskensis RB2256 4080700 YP_616255.1 CDS Sala_1206 NC_008048.1 1246738 1247958 R catalyzes the formation of 5-aminolevulinate from succinyl-CoA and glycine; 5-aminolevulinate synthase complement(1246738..1247958) Sphingopyxis alaskensis RB2256 4080701 YP_616256.1 CDS Sala_1207 NC_008048.1 1248095 1248901 R glutamate racemase complement(1248095..1248901) Sphingopyxis alaskensis RB2256 4080702 YP_616257.1 CDS Sala_1208 NC_008048.1 1249061 1249663 D hypothetical protein 1249061..1249663 Sphingopyxis alaskensis RB2256 4080703 YP_616258.1 CDS Sala_1209 NC_008048.1 1249660 1250742 D DNA processing protein DprA 1249660..1250742 Sphingopyxis alaskensis RB2256 4080704 YP_616259.1 CDS Sala_1210 NC_008048.1 1250855 1251085 D hypothetical protein 1250855..1251085 Sphingopyxis alaskensis RB2256 4080705 YP_616260.1 CDS Sala_1211 NC_008048.1 1251170 1253719 D catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 1251170..1253719 Sphingopyxis alaskensis RB2256 4080706 YP_616261.1 CDS era NC_008048.1 1253772 1254665 R Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era complement(1253772..1254665) Sphingopyxis alaskensis RB2256 4080707 YP_616262.1 CDS Sala_1213 NC_008048.1 1254662 1255342 R ribonuclease III complement(1254662..1255342) Sphingopyxis alaskensis RB2256 4080708 YP_616263.1 CDS Sala_1214 NC_008048.1 1255339 1256220 R peptidase S26A, signal peptidase I complement(1255339..1256220) Sphingopyxis alaskensis RB2256 4080438 YP_616264.1 CDS pgi NC_008048.1 1256425 1257930 D functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 1256425..1257930 Sphingopyxis alaskensis RB2256 4080439 YP_616265.1 CDS Sala_1216 NC_008048.1 1258022 1259368 D glutathione reductase 1258022..1259368 Sphingopyxis alaskensis RB2256 4080440 YP_616266.1 CDS Sala_1217 NC_008048.1 1259412 1260899 R XRE family transcriptional regulator complement(1259412..1260899) Sphingopyxis alaskensis RB2256 4080441 YP_616267.1 CDS Sala_1219 NC_008048.1 1262473 1262979 D hypothetical protein 1262473..1262979 Sphingopyxis alaskensis RB2256 4080443 YP_616268.1 CDS Sala_1220 NC_008048.1 1262976 1263416 D glyoxalase/bleomycin resistance protein/dioxygenase 1262976..1263416 Sphingopyxis alaskensis RB2256 4080444 YP_616269.1 CDS Sala_1221 NC_008048.1 1263607 1265754 D N-terminal domain; MDM; functions in conversion of succinate to propionate; methylmalonyl-CoA mutase 1263607..1265754 Sphingopyxis alaskensis RB2256 4080445 YP_616270.1 CDS Sala_1222 NC_008048.1 1265868 1266857 D biotin synthase 1265868..1266857 Sphingopyxis alaskensis RB2256 4080446 YP_616271.1 CDS Sala_1223 NC_008048.1 1267078 1269084 D carbamoyl-phosphate synthase subunit L 1267078..1269084 Sphingopyxis alaskensis RB2256 4080447 YP_616272.1 CDS Sala_1224 NC_008048.1 1269203 1269574 D secretion chaperone CsaA 1269203..1269574 Sphingopyxis alaskensis RB2256 4080448 YP_616273.1 CDS Sala_1225 NC_008048.1 1269784 1270572 R putative cyclase complement(1269784..1270572) Sphingopyxis alaskensis RB2256 4080449 YP_616274.1 CDS Sala_1226 NC_008048.1 1270779 1272422 D major facilitator superfamily transporter 1270779..1272422 Sphingopyxis alaskensis RB2256 4080450 YP_616275.1 CDS Sala_1227 NC_008048.1 1272468 1273514 D alanine racemase 1272468..1273514 Sphingopyxis alaskensis RB2256 4080451 YP_616276.1 CDS Sala_1228 NC_008048.1 1273585 1276758 R TonB-dependent receptor complement(1273585..1276758) Sphingopyxis alaskensis RB2256 4080452 YP_616277.1 CDS Sala_1229 NC_008048.1 1277280 1277813 D polyhydroxyalkonate synthesis repressor PhaR 1277280..1277813 Sphingopyxis alaskensis RB2256 4080453 YP_616278.1 CDS Sala_1230 NC_008048.1 1277797 1279380 D catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 1277797..1279380 Sphingopyxis alaskensis RB2256 4080454 YP_616279.1 CDS Sala_1231 NC_008048.1 1279381 1281681 D ribonuclease R 1279381..1281681 Sphingopyxis alaskensis RB2256 4080455 YP_616280.1 CDS Sala_1232 NC_008048.1 1281819 1282604 R XRE family transcriptional regulator complement(1281819..1282604) Sphingopyxis alaskensis RB2256 4080456 YP_616281.1 CDS Sala_1233 NC_008048.1 1282660 1283115 D hypothetical protein 1282660..1283115 Sphingopyxis alaskensis RB2256 4080304 YP_616282.1 CDS Sala_1234 NC_008048.1 1283124 1283579 R universal stress protein UspA and related nucleotide-binding protein complement(1283124..1283579) Sphingopyxis alaskensis RB2256 4080305 YP_616283.1 CDS Sala_1235 NC_008048.1 1283738 1285048 D dihydrolipoamide acetyltransferase 1283738..1285048 Sphingopyxis alaskensis RB2256 4080306 YP_616284.1 CDS Sala_1236 NC_008048.1 1285050 1285577 D hypothetical protein 1285050..1285577 Sphingopyxis alaskensis RB2256 4080307 YP_616285.1 CDS Sala_1237 NC_008048.1 1285570 1286967 D dihydrolipoamide dehydrogenase 1285570..1286967 Sphingopyxis alaskensis RB2256 4080308 YP_616286.1 CDS Sala_1238 NC_008048.1 1287056 1288390 D amidohydrolase 1287056..1288390 Sphingopyxis alaskensis RB2256 4080309 YP_616287.1 CDS Sala_1239 NC_008048.1 1288489 1289274 R protein tyrosine/serine phosphatase complement(1288489..1289274) Sphingopyxis alaskensis RB2256 4080310 YP_616288.1 CDS Sala_1240 NC_008048.1 1289343 1291265 D acyl-CoA dehydrogenase-like protein 1289343..1291265 Sphingopyxis alaskensis RB2256 4080311 YP_616289.1 CDS Sala_1241 NC_008048.1 1291442 1291957 D acyl-CoA dehydrogenase-like protein 1291442..1291957 Sphingopyxis alaskensis RB2256 4080312 YP_616290.1 CDS Sala_1242 NC_008048.1 1292041 1293171 R L-carnitine dehydratase/bile acid-inducible protein F complement(1292041..1293171) Sphingopyxis alaskensis RB2256 4080313 YP_616291.1 CDS Sala_1243 NC_008048.1 1293266 1294603 D hypothetical protein 1293266..1294603 Sphingopyxis alaskensis RB2256 4080314 YP_616292.1 CDS Sala_1244 NC_008048.1 1294604 1295851 R Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase complement(1294604..1295851) Sphingopyxis alaskensis RB2256 4080315 YP_616293.1 CDS Sala_1245 NC_008048.1 1295876 1296658 R short-chain dehydrogenase/reductase SDR complement(1295876..1296658) Sphingopyxis alaskensis RB2256 4080316 YP_616294.1 CDS Sala_1246 NC_008048.1 1296672 1297826 R acyl-CoA dehydrogenase-like protein complement(1296672..1297826) Sphingopyxis alaskensis RB2256 4080317 YP_616295.1 CDS Sala_1247 NC_008048.1 1297874 1298968 R acyl-CoA dehydrogenase-like protein complement(1297874..1298968) Sphingopyxis alaskensis RB2256 4080318 YP_616296.1 CDS Sala_1248 NC_008048.1 1299091 1300071 D 2-nitropropane dioxygenase 1299091..1300071 Sphingopyxis alaskensis RB2256 4080319 YP_616297.1 CDS Sala_1249 NC_008048.1 1300431 1302407 R hypothetical protein complement(1300431..1302407) Sphingopyxis alaskensis RB2256 4080320 YP_616298.1 CDS Sala_1250 NC_008048.1 1302473 1303240 R IstB-like ATP-binding protein complement(1302473..1303240) Sphingopyxis alaskensis RB2256 4080321 YP_616299.1 CDS Sala_1251 NC_008048.1 1303230 1304759 R integrase catalytic subunit complement(1303230..1304759) Sphingopyxis alaskensis RB2256 4080322 YP_616300.1 CDS Sala_1252 NC_008048.1 1304845 1305270 R putative transmembrane protein complement(1304845..1305270) Sphingopyxis alaskensis RB2256 4080323 YP_616301.1 CDS Sala_1254 NC_008048.1 1306740 1307804 D lytic murein transglycosylase 1306740..1307804 Sphingopyxis alaskensis RB2256 4080269 YP_616302.1 CDS Sala_1255 NC_008048.1 1307788 1308750 D rare lipoprotein A 1307788..1308750 Sphingopyxis alaskensis RB2256 4080270 YP_616303.1 CDS Sala_1256 NC_008048.1 1308924 1309745 D serine-type D-Ala-D-Ala carboxypeptidase 1308924..1309745 Sphingopyxis alaskensis RB2256 4080271 YP_616304.1 CDS Sala_1257 NC_008048.1 1309822 1310445 D thymidylate kinase 1309822..1310445 Sphingopyxis alaskensis RB2256 4080272 YP_616305.1 CDS Sala_1258 NC_008048.1 1310442 1311422 D DNA-directed DNA polymerase 1310442..1311422 Sphingopyxis alaskensis RB2256 4080273 YP_616306.1 CDS Sala_1259 NC_008048.1 1311461 1313044 D methionyl-tRNA synthetase 1311461..1313044 Sphingopyxis alaskensis RB2256 4080274 YP_616307.1 CDS Sala_1260 NC_008048.1 1313044 1313820 D TatD-related deoxyribonuclease 1313044..1313820 Sphingopyxis alaskensis RB2256 4080275 YP_616308.1 CDS Sala_1261 NC_008048.1 1313834 1314598 D beta-lactamase-like protein 1313834..1314598 Sphingopyxis alaskensis RB2256 4080276 YP_616309.1 CDS Sala_1262 NC_008048.1 1314967 1315548 D response regulator receiver/ANTAR domain-containing protein 1314967..1315548 Sphingopyxis alaskensis RB2256 4080277 YP_616310.1 CDS Sala_1263 NC_008048.1 1315545 1316756 D nitrate transporter component, nrtA 1315545..1316756 Sphingopyxis alaskensis RB2256 4080278 YP_616311.1 CDS Sala_1264 NC_008048.1 1317017 1318252 D major facilitator superfamily transporter 1317017..1318252 Sphingopyxis alaskensis RB2256 4080279 YP_616312.1 CDS Sala_1265 NC_008048.1 1318255 1319457 D putative lipoprotein 1318255..1319457 Sphingopyxis alaskensis RB2256 4080280 YP_616313.1 CDS Sala_1266 NC_008048.1 1319457 1321934 D nitrite reductase (NAD(P)H) large subunit, NirB 1319457..1321934 Sphingopyxis alaskensis RB2256 4080281 YP_616314.1 CDS Sala_1267 NC_008048.1 1321931 1322275 D nitrite reductase (NAD(P)H) large subunit, NirD 1321931..1322275 Sphingopyxis alaskensis RB2256 4080282 YP_616315.1 CDS Sala_1268 NC_008048.1 1322376 1325030 D molybdopterin oxidoreductase 1322376..1325030 Sphingopyxis alaskensis RB2256 4080283 YP_616316.1 CDS Sala_1269 NC_008048.1 1325020 1325796 D uroporphyrin-III C-methyltransferase 1325020..1325796 Sphingopyxis alaskensis RB2256 4080284 YP_616317.1 CDS Sala_1270 NC_008048.1 1325959 1326732 D MazG family protein 1325959..1326732 Sphingopyxis alaskensis RB2256 4082521 YP_616318.1 CDS Sala_1271 NC_008048.1 1326710 1328008 R HSR1-like GTP-binding protein complement(1326710..1328008) Sphingopyxis alaskensis RB2256 4082522 YP_616319.1 CDS hfq NC_008048.1 1328059 1328649 R stimulates the elongation of poly(A) tails; RNA-binding protein Hfq complement(1328059..1328649) Sphingopyxis alaskensis RB2256 4082523 YP_616320.1 CDS Sala_1273 NC_008048.1 1328670 1330055 R two component, sigma54 specific, Fis family transcriptional regulator complement(1328670..1330055) Sphingopyxis alaskensis RB2256 4082524 YP_616321.1 CDS Sala_1274 NC_008048.1 1330045 1332366 R multi-sensor signal transduction histidine kinase complement(1330045..1332366) Sphingopyxis alaskensis RB2256 4082525 YP_616322.1 CDS Sala_1275 NC_008048.1 1332420 1333838 R two component, sigma54 specific, Fis family transcriptional regulator complement(1332420..1333838) Sphingopyxis alaskensis RB2256 4082526 YP_616323.1 CDS Sala_1276 NC_008048.1 1333835 1334926 R signal transduction histidine kinase, nitrogen specific, NtrB complement(1333835..1334926) Sphingopyxis alaskensis RB2256 4082527 YP_616324.1 CDS Sala_1277 NC_008048.1 1334923 1335921 R dihydrouridine synthase TIM-barrel protein nifR3 complement(1334923..1335921) Sphingopyxis alaskensis RB2256 4082528 YP_616325.1 CDS Sala_1278 NC_008048.1 1336018 1337196 D 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 1336018..1337196 Sphingopyxis alaskensis RB2256 4082529 YP_616326.1 CDS Sala_1279 NC_008048.1 1337201 1337758 D CinA-like protein 1337201..1337758 Sphingopyxis alaskensis RB2256 4082530 YP_616327.1 CDS Sala_1280 NC_008048.1 1337701 1338180 R cyclase/dehydrase complement(1337701..1338180) Sphingopyxis alaskensis RB2256 4082531 YP_616328.1 CDS Sala_1281 NC_008048.1 1338188 1339123 R catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase complement(1338188..1339123) Sphingopyxis alaskensis RB2256 4082532 YP_616329.1 CDS Sala_1282 NC_008048.1 1339186 1339827 D carbonate dehydratase 1339186..1339827 Sphingopyxis alaskensis RB2256 4082533 YP_616330.1 CDS Sala_1283 NC_008048.1 1339832 1340275 R thioesterase superfamily protein complement(1339832..1340275) Sphingopyxis alaskensis RB2256 4082534 YP_616331.1 CDS Sala_1284 NC_008048.1 1340281 1342293 R ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; putative ABC transporter ATP-binding protein complement(1340281..1342293) Sphingopyxis alaskensis RB2256 4082535 YP_616332.1 CDS Sala_1285 NC_008048.1 1342399 1342668 D hypothetical protein 1342399..1342668 Sphingopyxis alaskensis RB2256 4082536 YP_616333.1 CDS Sala_1286 NC_008048.1 1343619 1344641 R group 1 glycosyl transferase complement(1343619..1344641) Sphingopyxis alaskensis RB2256 4082578 YP_616334.1 CDS Sala_1287 NC_008048.1 1344670 1346292 R histidine kinase A-like protein complement(1344670..1346292) Sphingopyxis alaskensis RB2256 4082579 YP_616335.1 CDS Sala_1288 NC_008048.1 1346471 1346944 D AsnC family transcriptional regulator 1346471..1346944 Sphingopyxis alaskensis RB2256 4082580 YP_616336.1 CDS Sala_1289 NC_008048.1 1347013 1348293 R hypothetical protein complement(1347013..1348293) Sphingopyxis alaskensis RB2256 4082581 YP_616337.1 CDS Sala_1290 NC_008048.1 1348456 1348752 R hypothetical protein complement(1348456..1348752) Sphingopyxis alaskensis RB2256 4082582 YP_616338.1 CDS Sala_1291 NC_008048.1 1348822 1351185 D hypothetical protein 1348822..1351185 Sphingopyxis alaskensis RB2256 4082583 YP_616339.1 CDS Sala_1292 NC_008048.1 1351474 1351734 R hypothetical protein complement(1351474..1351734) Sphingopyxis alaskensis RB2256 4082584 YP_616340.1 CDS Sala_1293 NC_008048.1 1351745 1353379 R beta-lactamase-like protein complement(1351745..1353379) Sphingopyxis alaskensis RB2256 4082585 YP_616341.1 CDS Sala_1294 NC_008048.1 1353376 1354161 R type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase complement(1353376..1354161) Sphingopyxis alaskensis RB2256 4082586 YP_616342.1 CDS Sala_1295 NC_008048.1 1354166 1354966 R biotin--acetyl-CoA-carboxylase ligase complement(1354166..1354966) Sphingopyxis alaskensis RB2256 4082587 YP_616343.1 CDS Sala_1296 NC_008048.1 1354888 1356318 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit N complement(1354888..1356318) Sphingopyxis alaskensis RB2256 4082588 YP_616344.1 CDS Sala_1297 NC_008048.1 1356315 1357868 R proton-translocating NADH-quinone oxidoreductase subunit M complement(1356315..1357868) Sphingopyxis alaskensis RB2256 4082589 YP_616345.1 CDS Sala_1298 NC_008048.1 1357865 1359910 R Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L complement(1357865..1359910) Sphingopyxis alaskensis RB2256 4082590 YP_616346.1 CDS Sala_1299 NC_008048.1 1359915 1360220 R NADH-ubiquinone oxidoreductase, chain 4L complement(1359915..1360220) Sphingopyxis alaskensis RB2256 4082591 YP_616347.1 CDS Sala_1300 NC_008048.1 1360351 1360962 R NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 complement(1360351..1360962) Sphingopyxis alaskensis RB2256 4082592 YP_616348.1 CDS Sala_1301 NC_008048.1 1360975 1361463 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I complement(1360975..1361463) Sphingopyxis alaskensis RB2256 4082593 YP_616349.1 CDS Sala_1302 NC_008048.1 1361460 1362503 R respiratory-chain NADH dehydrogenase subunit 1 complement(1361460..1362503) Sphingopyxis alaskensis RB2256 4082594 YP_616350.1 CDS Sala_1303 NC_008048.1 1362724 1364736 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit G complement(1362724..1364736) Sphingopyxis alaskensis RB2256 4082595 YP_616351.1 CDS Sala_1304 NC_008048.1 1364739 1365443 R hypothetical protein complement(1364739..1365443) Sphingopyxis alaskensis RB2256 4082596 YP_616352.1 CDS Sala_1305 NC_008048.1 1365440 1366732 R part of NADH-ubiquinone oxidoreductase complex I; shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase; NADH dehydrogenase I subunit F complement(1365440..1366732) Sphingopyxis alaskensis RB2256 4082229 YP_616353.1 CDS Sala_1306 NC_008048.1 1366845 1367513 R NADH-quinone oxidoreductase subunit E complement(1366845..1367513) Sphingopyxis alaskensis RB2256 4082230 YP_616354.1 CDS Sala_1307 NC_008048.1 1367513 1367794 R hypothetical protein complement(1367513..1367794) Sphingopyxis alaskensis RB2256 4082231 YP_616355.1 CDS Sala_1308 NC_008048.1 1367791 1369047 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit D complement(1367791..1369047) Sphingopyxis alaskensis RB2256 4082232 YP_616356.1 CDS Sala_1309 NC_008048.1 1369044 1369868 R NADH (or F420H2) dehydrogenase subunit C complement(1369044..1369868) Sphingopyxis alaskensis RB2256 4082233 YP_616357.1 CDS Sala_1310 NC_008048.1 1369943 1370476 R The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B complement(1369943..1370476) Sphingopyxis alaskensis RB2256 4082234 YP_616358.1 CDS Sala_1311 NC_008048.1 1370494 1370868 R NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 complement(1370494..1370868) Sphingopyxis alaskensis RB2256 4082235 YP_616359.1 CDS Sala_1312 NC_008048.1 1371097 1371579 D hypothetical protein 1371097..1371579 Sphingopyxis alaskensis RB2256 4082236 YP_616360.1 CDS Sala_1313 NC_008048.1 1371634 1372452 R inositol-1(or 4)-monophosphatase complement(1371634..1372452) Sphingopyxis alaskensis RB2256 4082237 YP_616361.1 CDS Sala_1314 NC_008048.1 1372574 1373137 R Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P complement(1372574..1373137) Sphingopyxis alaskensis RB2256 4082238 YP_616362.1 CDS Sala_1315 NC_008048.1 1373496 1374146 R thiamine-phosphate pyrophosphorylase complement(1373496..1374146) Sphingopyxis alaskensis RB2256 4082239 YP_616363.1 CDS Sala_1316 NC_008048.1 1374254 1374580 D hypothetical protein 1374254..1374580 Sphingopyxis alaskensis RB2256 4082240 YP_616364.1 CDS Sala_1317 NC_008048.1 1374647 1375537 R catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate in glycolysis; fructose-1,6-bisphosphate aldolase complement(1374647..1375537) Sphingopyxis alaskensis RB2256 4082241 YP_616365.1 CDS pgk NC_008048.1 1375616 1376812 R Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase complement(1375616..1376812) Sphingopyxis alaskensis RB2256 4082242 YP_616366.1 CDS Sala_1319 NC_008048.1 1376952 1377959 R glyceraldehyde-3-phosphate dehydrogenase, type I complement(1376952..1377959) Sphingopyxis alaskensis RB2256 4082243 YP_616367.1 CDS Sala_1320 NC_008048.1 1377996 1379978 R transketolase complement(1377996..1379978) Sphingopyxis alaskensis RB2256 4082244 YP_616368.1 CDS Sala_1321 NC_008048.1 1380334 1380780 D hypothetical protein 1380334..1380780 Sphingopyxis alaskensis RB2256 4082245 YP_616369.1 CDS Sala_1322 NC_008048.1 1381000 1381593 D 5-formyltetrahydrofolate cyclo-ligase 1381000..1381593 Sphingopyxis alaskensis RB2256 4082246 YP_616370.1 CDS Sala_1323 NC_008048.1 1381590 1381820 D hypothetical protein 1381590..1381820 Sphingopyxis alaskensis RB2256 4082247 YP_616371.1 CDS Sala_1324 NC_008048.1 1382021 1383247 R hypothetical protein complement(1382021..1383247) Sphingopyxis alaskensis RB2256 4080995 YP_616372.1 CDS Sala_1325 NC_008048.1 1383416 1384417 D hypothetical protein 1383416..1384417 Sphingopyxis alaskensis RB2256 4080996 YP_616373.1 CDS Sala_1326 NC_008048.1 1384429 1384893 D hypothetical protein 1384429..1384893 Sphingopyxis alaskensis RB2256 4080997 YP_616374.1 CDS Sala_1327 NC_008048.1 1384969 1386033 D hypothetical protein 1384969..1386033 Sphingopyxis alaskensis RB2256 4080998 YP_616375.1 CDS Sala_1328 NC_008048.1 1386101 1391209 D hypothetical protein 1386101..1391209 Sphingopyxis alaskensis RB2256 4080999 YP_616376.1 CDS Sala_1329 NC_008048.1 1391318 1392643 R branched-chain alpha-keto acid dehydrogenase subunit E2 complement(1391318..1392643) Sphingopyxis alaskensis RB2256 4081000 YP_616377.1 CDS Sala_1330 NC_008048.1 1392648 1393679 R transketolase, central region complement(1392648..1393679) Sphingopyxis alaskensis RB2256 4081001 YP_616378.1 CDS Sala_1331 NC_008048.1 1393679 1394989 R 3-methyl-2-oxobutanoate dehydrogenase complement(1393679..1394989) Sphingopyxis alaskensis RB2256 4081002 YP_616379.1 CDS Sala_1332 NC_008048.1 1395082 1396044 R thymidylate synthase complement(1395082..1396044) Sphingopyxis alaskensis RB2256 4081003 YP_616380.1 CDS Sala_1333 NC_008048.1 1396044 1396589 D DNA repair protein RadC 1396044..1396589 Sphingopyxis alaskensis RB2256 4081004 YP_616381.1 CDS Sala_1334 NC_008048.1 1396958 1397833 R N-formylglutamate amidohydrolase complement(1396958..1397833) Sphingopyxis alaskensis RB2256 4081006 YP_616382.1 CDS Sala_1335 NC_008048.1 1397974 1398351 D response regulator receiver protein 1397974..1398351 Sphingopyxis alaskensis RB2256 4081007 YP_616383.1 CDS Sala_1336 NC_008048.1 1398541 1399332 R short chain dehydrogenase complement(1398541..1399332) Sphingopyxis alaskensis RB2256 4081009 YP_616384.1 CDS Sala_1337 NC_008048.1 1399441 1400310 D alpha/beta hydrolase 1399441..1400310 Sphingopyxis alaskensis RB2256 4081010 YP_616385.1 CDS Sala_1338 NC_008048.1 1400358 1401074 D TonB-like protein 1400358..1401074 Sphingopyxis alaskensis RB2256 4082805 YP_616386.1 CDS Sala_1339 NC_008048.1 1401179 1401436 R hypothetical protein complement(1401179..1401436) Sphingopyxis alaskensis RB2256 4082807 YP_616387.1 CDS Sala_1340 NC_008048.1 1401436 1402215 D hypothetical protein 1401436..1402215 Sphingopyxis alaskensis RB2256 4082808 YP_616388.1 CDS Sala_1341 NC_008048.1 1402346 1402705 R hypothetical protein complement(1402346..1402705) Sphingopyxis alaskensis RB2256 4082809 YP_616389.1 CDS Sala_1342 NC_008048.1 1402686 1403240 R catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase complement(1402686..1403240) Sphingopyxis alaskensis RB2256 4082810 YP_616390.1 CDS Sala_1343 NC_008048.1 1403264 1404073 R cytochrome c1 complement(1403264..1404073) Sphingopyxis alaskensis RB2256 4082811 YP_616391.1 CDS Sala_1344 NC_008048.1 1404105 1405385 R cytochrome b/b6-like protein complement(1404105..1405385) Sphingopyxis alaskensis RB2256 4082812 YP_616392.1 CDS Sala_1345 NC_008048.1 1405399 1405956 R ubiquinol-cytochrome c reductase, iron-sulfur subunit complement(1405399..1405956) Sphingopyxis alaskensis RB2256 4082813 YP_616393.1 CDS Sala_1346 NC_008048.1 1406180 1406638 D tRNA/rRNA methyltransferase SpoU 1406180..1406638 Sphingopyxis alaskensis RB2256 4082814 YP_616394.1 CDS Sala_1347 NC_008048.1 1406635 1407495 D catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase 1406635..1407495 Sphingopyxis alaskensis RB2256 4082815 YP_616395.1 CDS Sala_1348 NC_008048.1 1407547 1408428 R hypothetical protein complement(1407547..1408428) Sphingopyxis alaskensis RB2256 4082816 YP_616396.1 CDS Sala_1349 NC_008048.1 1408534 1409280 R hypothetical protein complement(1408534..1409280) Sphingopyxis alaskensis RB2256 4082817 YP_616397.1 CDS Sala_1350 NC_008048.1 1409413 1410066 D lipoate-protein ligase B 1409413..1410066 Sphingopyxis alaskensis RB2256 4082818 YP_616398.1 CDS Sala_1351 NC_008048.1 1410076 1410420 D hypothetical protein 1410076..1410420 Sphingopyxis alaskensis RB2256 4082819 YP_616399.1 CDS Sala_1352 NC_008048.1 1410446 1410940 R transposase, IS4 complement(1410446..1410940) Sphingopyxis alaskensis RB2256 4082820 YP_616400.1 CDS Sala_1353 NC_008048.1 1411338 1412288 D integrase catalytic subunit 1411338..1412288 Sphingopyxis alaskensis RB2256 4082821 YP_616401.1 CDS Sala_1354 NC_008048.1 1412285 1412917 R hypothetical protein complement(1412285..1412917) Sphingopyxis alaskensis RB2256 4082822 YP_616402.1 CDS Sala_1355 NC_008048.1 1412922 1413605 R ExsB protein complement(1412922..1413605) Sphingopyxis alaskensis RB2256 4081920 YP_616403.1 CDS Sala_1356 NC_008048.1 1413780 1414205 R hypothetical protein complement(1413780..1414205) Sphingopyxis alaskensis RB2256 4081921 YP_616404.1 CDS Sala_1357 NC_008048.1 1414316 1415161 R Hsp33 protein complement(1414316..1415161) Sphingopyxis alaskensis RB2256 4081922 YP_616405.1 CDS Sala_1358 NC_008048.1 1415250 1416173 R catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase complement(1415250..1416173) Sphingopyxis alaskensis RB2256 4081923 YP_616406.1 CDS argD NC_008048.1 1416274 1417461 R DapATase; functions in arginine biosynthetic pathway; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine transaminase protein complement(1416274..1417461) Sphingopyxis alaskensis RB2256 4081924 YP_616407.1 CDS Sala_1360 NC_008048.1 1417569 1418606 R luciferase-like protein complement(1417569..1418606) Sphingopyxis alaskensis RB2256 4081925 YP_616408.1 CDS Sala_1361 NC_008048.1 1418635 1419138 R AsnC family transcriptional regulator complement(1418635..1419138) Sphingopyxis alaskensis RB2256 4081926 YP_616409.1 CDS Sala_1362 NC_008048.1 1419161 1419751 D lysine exporter protein LysE/YggA 1419161..1419751 Sphingopyxis alaskensis RB2256 4081927 YP_616410.1 CDS Sala_1363 NC_008048.1 1419815 1420831 D aldo/keto reductase 1419815..1420831 Sphingopyxis alaskensis RB2256 4081928 YP_616411.1 CDS Sala_1364 NC_008048.1 1420893 1421360 D hypothetical protein 1420893..1421360 Sphingopyxis alaskensis RB2256 4081929 YP_616412.1 CDS Sala_1365 NC_008048.1 1421417 1422304 R dienelactone hydrolase complement(1421417..1422304) Sphingopyxis alaskensis RB2256 4081930 YP_616413.1 CDS Sala_1366 NC_008048.1 1422511 1424334 R Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase complement(1422511..1424334) Sphingopyxis alaskensis RB2256 4081931 YP_616414.1 CDS Sala_1367 NC_008048.1 1424353 1424733 R PilT protein-like protein complement(1424353..1424733) Sphingopyxis alaskensis RB2256 4081932 YP_616415.1 CDS Sala_1368 NC_008048.1 1424774 1425076 R hypothetical protein complement(1424774..1425076) Sphingopyxis alaskensis RB2256 4081933 YP_616416.1 CDS Sala_1369 NC_008048.1 1425136 1425450 R hypothetical protein complement(1425136..1425450) Sphingopyxis alaskensis RB2256 4081934 YP_616417.1 CDS glmU NC_008048.1 1425447 1426814 R forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase complement(1425447..1426814) Sphingopyxis alaskensis RB2256 4081935 YP_616418.1 CDS Sala_1371 NC_008048.1 1426862 1427530 D phosphoglycolate phosphatase 1426862..1427530 Sphingopyxis alaskensis RB2256 4081936 YP_616419.1 CDS Sala_1372 NC_008048.1 1427553 1428569 R hypothetical protein complement(1427553..1428569) Sphingopyxis alaskensis RB2256 4081937 YP_616420.1 CDS Sala_1373 NC_008048.1 1428566 1429558 R HPr kinase complement(1428566..1429558) Sphingopyxis alaskensis RB2256 4081938 YP_616421.1 CDS Sala_1374 NC_008048.1 1429703 1430149 R MarR family transcriptional regulator complement(1429703..1430149) Sphingopyxis alaskensis RB2256 4081939 YP_616422.1 CDS Sala_1375 NC_008048.1 1430216 1432261 R TonB-dependent receptor complement(1430216..1432261) Sphingopyxis alaskensis RB2256 4081847 YP_616423.1 CDS Sala_1376 NC_008048.1 1432258 1432890 R maleylacetoacetate isomerase complement(1432258..1432890) Sphingopyxis alaskensis RB2256 4081848 YP_616424.1 CDS Sala_1377 NC_008048.1 1433049 1434080 R hypothetical protein complement(1433049..1434080) Sphingopyxis alaskensis RB2256 4081849 YP_616425.1 CDS Sala_1378 NC_008048.1 1434077 1435279 R hypothetical protein complement(1434077..1435279) Sphingopyxis alaskensis RB2256 4081850 YP_616426.1 CDS Sala_1379 NC_008048.1 1435298 1435786 D hypothetical protein 1435298..1435786 Sphingopyxis alaskensis RB2256 4081851 YP_616427.1 CDS Sala_1380 NC_008048.1 1435897 1436595 R aspartate racemase complement(1435897..1436595) Sphingopyxis alaskensis RB2256 4081852 YP_616428.1 CDS Sala_1381 NC_008048.1 1436718 1438199 R NAD(P) transhydrogenase subunit beta complement(1436718..1438199) Sphingopyxis alaskensis RB2256 4081853 YP_616429.1 CDS Sala_1382 NC_008048.1 1438201 1438482 R NAD(P) transhydrogenase subunit alpha complement(1438201..1438482) Sphingopyxis alaskensis RB2256 4081854 YP_616430.1 CDS Sala_1383 NC_008048.1 1438928 1439830 D nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 1438928..1439830 Sphingopyxis alaskensis RB2256 4081855 YP_616431.1 CDS Sala_1384 NC_008048.1 1439837 1440490 R type IV pilus assembly PilZ complement(1439837..1440490) Sphingopyxis alaskensis RB2256 4081856 YP_616432.1 CDS Sala_1385 NC_008048.1 1440735 1441529 R Asp/Glu racemase complement(1440735..1441529) Sphingopyxis alaskensis RB2256 4081857 YP_616433.1 CDS Sala_1386 NC_008048.1 1441559 1442467 R 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase complement(1441559..1442467) Sphingopyxis alaskensis RB2256 4081858 YP_616434.1 CDS Sala_1387 NC_008048.1 1442455 1443594 R cupin complement(1442455..1443594) Sphingopyxis alaskensis RB2256 4081859 YP_616435.1 CDS Sala_1388 NC_008048.1 1443591 1444607 R nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(1443591..1444607) Sphingopyxis alaskensis RB2256 4081860 YP_616436.1 CDS Sala_1389 NC_008048.1 1444604 1445845 R kynureninase complement(1444604..1445845) Sphingopyxis alaskensis RB2256 4081861 YP_616437.1 CDS Sala_1390 NC_008048.1 1445842 1446471 R putative cyclase complement(1445842..1446471) Sphingopyxis alaskensis RB2256 4081862 YP_616438.1 CDS Sala_1391 NC_008048.1 1446468 1447373 R tryptophan 2,3-dioxygenase complement(1446468..1447373) Sphingopyxis alaskensis RB2256 4081863 YP_616439.1 CDS phhA NC_008048.1 1447370 1448242 R phenylalanine 4-hydroxylase; phenylalanine 4-hydroxylase; catalyzes the formation of 4a-hydroxytetrahydrobiopterin and tyrosine from phenylalanine and tetrahydrobiopterin; phenylalanine 4-monooxygenase complement(1447370..1448242) Sphingopyxis alaskensis RB2256 4081864 YP_616440.1 CDS Sala_1393 NC_008048.1 1448429 1448908 D AsnC family transcriptional regulator 1448429..1448908 Sphingopyxis alaskensis RB2256 4081865 YP_616441.1 CDS Sala_1394 NC_008048.1 1449079 1450170 D diguanylate cyclase 1449079..1450170 Sphingopyxis alaskensis RB2256 4081750 YP_616442.1 CDS Sala_1395 NC_008048.1 1450243 1451538 R glucose/galactose transporter complement(1450243..1451538) Sphingopyxis alaskensis RB2256 4081751 YP_616443.1 CDS Sala_1396 NC_008048.1 1451701 1452069 R PRC-barrel protein complement(1451701..1452069) Sphingopyxis alaskensis RB2256 4081752 YP_616444.1 CDS Sala_1397 NC_008048.1 1452212 1452970 R SAM-dependent methyltransferase complement(1452212..1452970) Sphingopyxis alaskensis RB2256 4081753 YP_616445.1 CDS Sala_1398 NC_008048.1 1453095 1454492 R catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase complement(1453095..1454492) Sphingopyxis alaskensis RB2256 4081754 YP_616446.1 CDS Sala_1399 NC_008048.1 1454520 1455086 R SurF1 family protein complement(1454520..1455086) Sphingopyxis alaskensis RB2256 4081755 YP_616447.1 CDS Sala_1400 NC_008048.1 1455172 1455567 R hypothetical protein complement(1455172..1455567) Sphingopyxis alaskensis RB2256 4081756 YP_616448.1 CDS Sala_1401 NC_008048.1 1455569 1456444 R cytochrome c oxidase subunit III complement(1455569..1456444) Sphingopyxis alaskensis RB2256 4081757 YP_616449.1 CDS Sala_1402 NC_008048.1 1456524 1457084 R involved in the insertion of copper into subunit I of cytochrome C oxidase; cytochrome C oxidase assembly protein complement(1456524..1457084) Sphingopyxis alaskensis RB2256 4081758 YP_616450.1 CDS Sala_1403 NC_008048.1 1457227 1458153 R converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase complement(1457227..1458153) Sphingopyxis alaskensis RB2256 4081759 YP_616451.1 CDS Sala_1404 NC_008048.1 1458198 1459868 R cytochrome-c oxidase complement(1458198..1459868) Sphingopyxis alaskensis RB2256 4081760 YP_616452.1 CDS Sala_1405 NC_008048.1 1459884 1460915 R cytochrome-c oxidase complement(1459884..1460915) Sphingopyxis alaskensis RB2256 4081761 YP_616453.1 CDS pyrE NC_008048.1 1461146 1461736 D involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 1461146..1461736 Sphingopyxis alaskensis RB2256 4081762 YP_616454.1 CDS Sala_1407 NC_008048.1 1461733 1462479 D involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 1461733..1462479 Sphingopyxis alaskensis RB2256 4081763 YP_616455.1 CDS Sala_1408 NC_008048.1 1462476 1462727 D hypothetical protein 1462476..1462727 Sphingopyxis alaskensis RB2256 4081764 YP_616456.1 CDS acpS NC_008048.1 1462724 1463125 D Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 1462724..1463125 Sphingopyxis alaskensis RB2256 4081765 YP_616457.1 CDS Sala_1410 NC_008048.1 1463133 1463969 D peptidase S26A, signal peptidase I 1463133..1463969 Sphingopyxis alaskensis RB2256 4081766 YP_616458.1 CDS Sala_1411 NC_008048.1 1463987 1465096 D hypothetical protein 1463987..1465096 Sphingopyxis alaskensis RB2256 4081767 YP_616459.1 CDS Sala_1412 NC_008048.1 1465186 1465833 R peptidylprolyl isomerase, FKBP-type complement(1465186..1465833) Sphingopyxis alaskensis RB2256 4081768 YP_616460.1 CDS Sala_1413 NC_008048.1 1465894 1467165 D amidohydrolase 1465894..1467165 Sphingopyxis alaskensis RB2256 4081769 YP_616461.1 CDS Sala_1414 NC_008048.1 1467222 1469960 D helicase c2 1467222..1469960 Sphingopyxis alaskensis RB2256 4081731 YP_616462.1 CDS Sala_1415 NC_008048.1 1470017 1470568 D putative phosphohistidine phosphatase, SixA 1470017..1470568 Sphingopyxis alaskensis RB2256 4081732 YP_616463.1 CDS Sala_1416 NC_008048.1 1470688 1471080 R MerR family transcriptional regulator complement(1470688..1471080) Sphingopyxis alaskensis RB2256 4081733 YP_616464.1 CDS Sala_1417 NC_008048.1 1471095 1471388 R integration host factor subunit alpha complement(1471095..1471388) Sphingopyxis alaskensis RB2256 4081734 YP_616465.1 CDS Sala_1418 NC_008048.1 1471564 1472529 R 3-oxoacyl-(acyl-carrier-protein) synthase III complement(1471564..1472529) Sphingopyxis alaskensis RB2256 4081735 YP_616466.1 CDS Sala_1419 NC_008048.1 1472526 1473560 R involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; putative glycerol-3-phosphate acyltransferase PlsX complement(1472526..1473560) Sphingopyxis alaskensis RB2256 4081736 YP_616467.1 CDS rpmF NC_008048.1 1473583 1473762 R some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 complement(1473583..1473762) Sphingopyxis alaskensis RB2256 4081737 YP_616468.1 CDS Sala_1421 NC_008048.1 1474080 1474517 D eicosanoid and glutathione metabolism membrane-associated protein 1474080..1474517 Sphingopyxis alaskensis RB2256 4081738 YP_616469.1 CDS Sala_1422 NC_008048.1 1474537 1475202 R beta-lactamase-like protein complement(1474537..1475202) Sphingopyxis alaskensis RB2256 4081739 YP_616470.1 CDS Sala_1423 NC_008048.1 1475304 1475609 D hypothetical protein 1475304..1475609 Sphingopyxis alaskensis RB2256 4081740 YP_616471.1 CDS Sala_1424 NC_008048.1 1475622 1476176 R aspartyl protease-like protein complement(1475622..1476176) Sphingopyxis alaskensis RB2256 4081741 YP_616472.1 CDS Sala_1425 NC_008048.1 1476218 1476868 R hypothetical protein complement(1476218..1476868) Sphingopyxis alaskensis RB2256 4081742 YP_616473.1 CDS Sala_1426 NC_008048.1 1476865 1477590 R glycine cleavage T protein (aminomethyl transferase) complement(1476865..1477590) Sphingopyxis alaskensis RB2256 4081743 YP_616474.1 CDS Sala_1427 NC_008048.1 1477649 1478671 D catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 1477649..1478671 Sphingopyxis alaskensis RB2256 4081744 YP_616475.1 CDS Sala_1428 NC_008048.1 1478702 1479616 R rarD protein complement(1478702..1479616) Sphingopyxis alaskensis RB2256 4081745 YP_616476.1 CDS Sala_1429 NC_008048.1 1479903 1480130 R hypothetical protein complement(1479903..1480130) Sphingopyxis alaskensis RB2256 4081746 YP_616477.1 CDS Sala_1430 NC_008048.1 1480307 1480705 D 17 kDa surface antigen 1480307..1480705 Sphingopyxis alaskensis RB2256 4081747 YP_616478.1 CDS Sala_1431 NC_008048.1 1480868 1481419 D acetyltransferase 1480868..1481419 Sphingopyxis alaskensis RB2256 4081748 YP_616479.1 CDS Sala_1432 NC_008048.1 1481416 1481856 D hypothetical protein 1481416..1481856 Sphingopyxis alaskensis RB2256 4081749 YP_616480.1 CDS Sala_1433 NC_008048.1 1481943 1482692 D hypothetical protein 1481943..1482692 Sphingopyxis alaskensis RB2256 4081515 YP_616481.1 CDS Sala_1434 NC_008048.1 1482778 1482960 R CsbD-like protein complement(1482778..1482960) Sphingopyxis alaskensis RB2256 4081516 YP_616482.1 CDS Sala_1435 NC_008048.1 1483112 1484839 D hypothetical protein 1483112..1484839 Sphingopyxis alaskensis RB2256 4081517 YP_616483.1 CDS Sala_1437 NC_008048.1 1485902 1486342 D catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 1485902..1486342 Sphingopyxis alaskensis RB2256 4081519 YP_616484.1 CDS Sala_1438 NC_008048.1 1486410 1486889 D acetyl-CoA carboxylase, biotin carboxyl carrier protein 1486410..1486889 Sphingopyxis alaskensis RB2256 4081520 YP_616485.1 CDS Sala_1439 NC_008048.1 1486896 1488260 D acetyl-CoA carboxylase, biotin carboxylase 1486896..1488260 Sphingopyxis alaskensis RB2256 4081521 YP_616486.1 CDS Sala_1440 NC_008048.1 1488552 1489781 D hypothetical protein 1488552..1489781 Sphingopyxis alaskensis RB2256 4081522 YP_616487.1 CDS rplA NC_008048.1 1489863 1490561 R in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 complement(1489863..1490561) Sphingopyxis alaskensis RB2256 4081523 YP_616488.1 CDS rplK NC_008048.1 1490564 1490995 R binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 complement(1490564..1490995) Sphingopyxis alaskensis RB2256 4081524 YP_616489.1 CDS Sala_1443 NC_008048.1 1491180 1492136 R palmitoyl-CoA hydrolase complement(1491180..1492136) Sphingopyxis alaskensis RB2256 4081525 YP_616490.1 CDS Sala_1444 NC_008048.1 1492186 1492722 R NusG antitermination factor complement(1492186..1492722) Sphingopyxis alaskensis RB2256 4081526 YP_616491.1 CDS Sala_1445 NC_008048.1 1492758 1493138 R protein translocation complex subunit SecE complement(1492758..1493138) Sphingopyxis alaskensis RB2256 4081527 YP_616492.1 CDS Sala_1446 NC_008048.1 1493113 1494459 R Na+/melibiose symporter-like protein complement(1493113..1494459) Sphingopyxis alaskensis RB2256 4081528 YP_616493.1 CDS Sala_1447 NC_008048.1 1494518 1495162 R TetR family transcriptional regulator complement(1494518..1495162) Sphingopyxis alaskensis RB2256 4081529 YP_616494.1 CDS Sala_1448 NC_008048.1 1495276 1496406 D secretion protein HlyD 1495276..1496406 Sphingopyxis alaskensis RB2256 4081530 YP_616495.1 CDS Sala_1449 NC_008048.1 1496413 1499577 D hydrophobe/amphiphile efflux protein 1496413..1499577 Sphingopyxis alaskensis RB2256 4081531 YP_616496.1 CDS Sala_1450 NC_008048.1 1499570 1500985 D RND efflux system, outer membrane lipoprotein, NodT 1499570..1500985 Sphingopyxis alaskensis RB2256 4081532 YP_616497.1 CDS Sala_1451 NC_008048.1 1500982 1502088 D DNA alkylation repair enzyme-like protein 1500982..1502088 Sphingopyxis alaskensis RB2256 4081533 YP_616498.1 CDS Sala_1452 NC_008048.1 1502085 1502336 R hypothetical protein complement(1502085..1502336) Sphingopyxis alaskensis RB2256 4081534 YP_616499.1 CDS Sala_1453 NC_008048.1 1502354 1504453 R penicillin-binding protein 1A complement(1502354..1504453) Sphingopyxis alaskensis RB2256 4081264 YP_616500.1 CDS Sala_1454 NC_008048.1 1504478 1505446 R hypothetical protein complement(1504478..1505446) Sphingopyxis alaskensis RB2256 4081265 YP_616501.1 CDS Sala_1455 NC_008048.1 1505446 1508568 R TonB-dependent receptor, plug complement(1505446..1508568) Sphingopyxis alaskensis RB2256 4081266 YP_616502.1 CDS Sala_1456 NC_008048.1 1508600 1509940 R sodium:dicarboxylate symporter complement(1508600..1509940) Sphingopyxis alaskensis RB2256 4081267 YP_616503.1 CDS Sala_1457 NC_008048.1 1510112 1511968 D sensor signal transduction histidine kinase 1510112..1511968 Sphingopyxis alaskensis RB2256 4081268 YP_616504.1 CDS Sala_1458 NC_008048.1 1511965 1513302 D two component, sigma54 specific, Fis family transcriptional regulator 1511965..1513302 Sphingopyxis alaskensis RB2256 4081269 YP_616505.1 CDS Sala_1459 NC_008048.1 1513392 1514570 R peptidase M19 complement(1513392..1514570) Sphingopyxis alaskensis RB2256 4081270 YP_616506.1 CDS Sala_1460 NC_008048.1 1514567 1516138 R beta-lactamase complement(1514567..1516138) Sphingopyxis alaskensis RB2256 4081271 YP_616507.1 CDS Sala_1461 NC_008048.1 1516135 1517271 R hypothetical protein complement(1516135..1517271) Sphingopyxis alaskensis RB2256 4081272 YP_616508.1 CDS Sala_1462 NC_008048.1 1517268 1518308 R hypothetical protein complement(1517268..1518308) Sphingopyxis alaskensis RB2256 4081273 YP_616509.1 CDS Sala_1463 NC_008048.1 1518329 1520797 R TonB-dependent receptor, plug complement(1518329..1520797) Sphingopyxis alaskensis RB2256 4081274 YP_616510.1 CDS Sala_1464 NC_008048.1 1521021 1522028 R mandelate racemase/muconate lactonizing protein complement(1521021..1522028) Sphingopyxis alaskensis RB2256 4081275 YP_616511.1 CDS Sala_1465 NC_008048.1 1522028 1524001 R beta-lactamase complement(1522028..1524001) Sphingopyxis alaskensis RB2256 4081276 YP_616512.1 CDS Sala_1466 NC_008048.1 1524144 1524764 D XRE family transcriptional regulator 1524144..1524764 Sphingopyxis alaskensis RB2256 4081277 YP_616513.1 CDS Sala_1467 NC_008048.1 1524787 1526484 D N-acyl-D-amino-acid deacylase 1524787..1526484 Sphingopyxis alaskensis RB2256 4081278 YP_616514.1 CDS Sala_1468 NC_008048.1 1526939 1527823 R phosphoserine phosphatase SerB complement(1526939..1527823) Sphingopyxis alaskensis RB2256 4081279 YP_616515.1 CDS miaA NC_008048.1 1527864 1528784 D IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 1527864..1528784 Sphingopyxis alaskensis RB2256 4081280 YP_616516.1 CDS Sala_1470 NC_008048.1 1528868 1530613 D acetolactate synthase large subunit 1528868..1530613 Sphingopyxis alaskensis RB2256 4081281 YP_616517.1 CDS ilvH NC_008048.1 1530762 1531280 D with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit 1530762..1531280 Sphingopyxis alaskensis RB2256 4081282 YP_616518.1 CDS Sala_1472 NC_008048.1 1531388 1532428 D catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 1531388..1532428 Sphingopyxis alaskensis RB2256 4081244 YP_616519.1 CDS Sala_1473 NC_008048.1 1532537 1533676 D catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine; 8-amino-7-oxononanoate synthase 1532537..1533676 Sphingopyxis alaskensis RB2256 4081245 YP_616520.1 CDS bioD NC_008048.1 1533673 1534281 D DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase 1533673..1534281 Sphingopyxis alaskensis RB2256 4081246 YP_616521.1 CDS Sala_1475 NC_008048.1 1534336 1535592 D catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 1534336..1535592 Sphingopyxis alaskensis RB2256 4081247 YP_616522.1 CDS Sala_1476 NC_008048.1 1535730 1537070 D PpiC-type peptidyl-prolyl cis-trans isomerase 1535730..1537070 Sphingopyxis alaskensis RB2256 4081248 YP_616523.1 CDS pdxA NC_008048.1 1537070 1538089 D catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase 1537070..1538089 Sphingopyxis alaskensis RB2256 4081249 YP_616524.1 CDS ksgA NC_008048.1 1538110 1538925 D catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 1538110..1538925 Sphingopyxis alaskensis RB2256 4081250 YP_616525.1 CDS Sala_1479 NC_008048.1 1539234 1539485 R hypothetical protein complement(1539234..1539485) Sphingopyxis alaskensis RB2256 4081251 YP_616526.1 CDS Sala_1480 NC_008048.1 1539616 1539888 D cold-shock DNA-binding domain-containing protein 1539616..1539888 Sphingopyxis alaskensis RB2256 4081252 YP_616527.1 CDS infA NC_008048.1 1539909 1540148 D stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 1539909..1540148 Sphingopyxis alaskensis RB2256 4081253 YP_616528.1 CDS Sala_1482 NC_008048.1 1540387 1540581 D hypothetical protein 1540387..1540581 Sphingopyxis alaskensis RB2256 4081254 YP_616529.1 CDS Sala_1483 NC_008048.1 1540612 1541913 R RNA polymerase ECF-subfamily sigma factor complement(1540612..1541913) Sphingopyxis alaskensis RB2256 4081255 YP_616530.1 CDS Sala_1484 NC_008048.1 1541932 1542363 R hypothetical protein complement(1541932..1542363) Sphingopyxis alaskensis RB2256 4081256 YP_616531.1 CDS Sala_1485 NC_008048.1 1542641 1546924 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' complement(1542641..1546924) Sphingopyxis alaskensis RB2256 4081257 YP_616532.1 CDS rpoB NC_008048.1 1546979 1551157 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta complement(1546979..1551157) Sphingopyxis alaskensis RB2256 4081258 YP_616533.1 CDS Sala_1487 NC_008048.1 1551452 1552255 D enoyl-CoA hydratase/isomerase 1551452..1552255 Sphingopyxis alaskensis RB2256 4081259 YP_616534.1 CDS Sala_1488 NC_008048.1 1552390 1552992 R hypothetical protein complement(1552390..1552992) Sphingopyxis alaskensis RB2256 4081260 YP_616535.1 CDS Sala_1489 NC_008048.1 1553061 1553696 R hypothetical protein complement(1553061..1553696) Sphingopyxis alaskensis RB2256 4081261 YP_616536.1 CDS Sala_1490 NC_008048.1 1553755 1554312 R hypothetical protein complement(1553755..1554312) Sphingopyxis alaskensis RB2256 4081262 YP_616537.1 CDS Sala_1491 NC_008048.1 1554464 1554907 D BadM/Rrf2 family transcriptional regulator 1554464..1554907 Sphingopyxis alaskensis RB2256 4081263 YP_616538.1 CDS Sala_1492 NC_008048.1 1555158 1555484 R hypothetical protein complement(1555158..1555484) Sphingopyxis alaskensis RB2256 4081169 YP_616539.1 CDS Sala_1493 NC_008048.1 1555610 1556950 D catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 1555610..1556950 Sphingopyxis alaskensis RB2256 4081170 YP_616540.1 CDS Sala_1494 NC_008048.1 1556947 1557576 D cytidylate kinase 1556947..1557576 Sphingopyxis alaskensis RB2256 4081171 YP_616541.1 CDS rpsA NC_008048.1 1557849 1559561 D in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 1557849..1559561 Sphingopyxis alaskensis RB2256 4081172 YP_616542.1 CDS Sala_1496 NC_008048.1 1559770 1560048 D histone-like DNA-binding protein 1559770..1560048 Sphingopyxis alaskensis RB2256 4081173 YP_616543.1 CDS Sala_1497 NC_008048.1 1560148 1560915 R hypothetical protein complement(1560148..1560915) Sphingopyxis alaskensis RB2256 4081174 YP_616544.1 CDS Sala_1498 NC_008048.1 1560912 1561859 R ABC transporter complement(1560912..1561859) Sphingopyxis alaskensis RB2256 4081175 YP_616545.1 CDS Sala_1499 NC_008048.1 1562062 1562994 R hypothetical protein complement(1562062..1562994) Sphingopyxis alaskensis RB2256 4081177 YP_616546.1 CDS Sala_1500 NC_008048.1 1563081 1564586 D extracellular solute-binding protein 1563081..1564586 Sphingopyxis alaskensis RB2256 4081178 YP_616547.1 CDS Sala_1501 NC_008048.1 1564893 1565315 D hypothetical protein 1564893..1565315 Sphingopyxis alaskensis RB2256 4081179 YP_616548.1 CDS Sala_1502 NC_008048.1 1565391 1565924 R response regulator receiver protein complement(1565391..1565924) Sphingopyxis alaskensis RB2256 4081180 YP_616549.1 CDS Sala_1503 NC_008048.1 1565921 1567228 R sensor signal transduction histidine kinase complement(1565921..1567228) Sphingopyxis alaskensis RB2256 4081181 YP_616550.1 CDS Sala_1504 NC_008048.1 1567228 1567929 R Surfeit locus 1 complement(1567228..1567929) Sphingopyxis alaskensis RB2256 4081182 YP_616551.1 CDS Sala_1505 NC_008048.1 1567926 1568312 R cytochrome C oxidase subunit IV complement(1567926..1568312) Sphingopyxis alaskensis RB2256 4081183 YP_616552.1 CDS Sala_1506 NC_008048.1 1568309 1568935 R cytochrome c oxidase subunit III complement(1568309..1568935) Sphingopyxis alaskensis RB2256 4081184 YP_616553.1 CDS Sala_1507 NC_008048.1 1568940 1570958 R cytochrome-c oxidase complement(1568940..1570958) Sphingopyxis alaskensis RB2256 4080020 YP_616554.1 CDS Sala_1508 NC_008048.1 1570980 1572209 R ubiquinol oxidase subunit II complement(1570980..1572209) Sphingopyxis alaskensis RB2256 4080021 YP_616555.1 CDS Sala_1509 NC_008048.1 1572460 1573788 D general substrate transporter 1572460..1573788 Sphingopyxis alaskensis RB2256 4080022 YP_616556.1 CDS Sala_1510 NC_008048.1 1574024 1575583 D major facilitator superfamily transporter 1574024..1575583 Sphingopyxis alaskensis RB2256 4080023 YP_616557.1 CDS Sala_1511 NC_008048.1 1575805 1578285 R Beta-glucosidase complement(1575805..1578285) Sphingopyxis alaskensis RB2256 4080024 YP_616558.1 CDS Sala_1512 NC_008048.1 1578637 1580598 R K+ potassium transporter complement(1578637..1580598) Sphingopyxis alaskensis RB2256 4080025 YP_616559.1 CDS Sala_1513 NC_008048.1 1580638 1581312 R cytochrome c biogenesis factor complement(1580638..1581312) Sphingopyxis alaskensis RB2256 4080026 YP_616560.1 CDS Sala_1514 NC_008048.1 1581309 1581740 R cytochrome C biogenesis protein complement(1581309..1581740) Sphingopyxis alaskensis RB2256 4080027 YP_616561.1 CDS Sala_1515 NC_008048.1 1581737 1582267 R thioredoxin-like protein complement(1581737..1582267) Sphingopyxis alaskensis RB2256 4080028 YP_616562.1 CDS Sala_1516 NC_008048.1 1582264 1584234 R cytochrome c assembly protein complement(1582264..1584234) Sphingopyxis alaskensis RB2256 4080029 YP_616563.1 CDS Sala_1517 NC_008048.1 1584368 1584805 R CcmE/CycJ protein complement(1584368..1584805) Sphingopyxis alaskensis RB2256 4080030 YP_616564.1 CDS Sala_1518 NC_008048.1 1584802 1584957 R hypothetical protein complement(1584802..1584957) Sphingopyxis alaskensis RB2256 4080031 YP_616565.1 CDS Sala_1519 NC_008048.1 1584962 1585693 R heme exporter protein CcmC complement(1584962..1585693) Sphingopyxis alaskensis RB2256 4080032 YP_616566.1 CDS Sala_1520 NC_008048.1 1585763 1586194 R hypothetical protein complement(1585763..1586194) Sphingopyxis alaskensis RB2256 4080033 YP_616567.1 CDS Sala_1521 NC_008048.1 1586256 1587305 R Glu/Leu/Phe/Val dehydrogenase complement(1586256..1587305) Sphingopyxis alaskensis RB2256 4080034 YP_616568.1 CDS Sala_1522 NC_008048.1 1587606 1588262 D 2OG-Fe(II) oxygenase 1587606..1588262 Sphingopyxis alaskensis RB2256 4080036 YP_616569.1 CDS Sala_1523 NC_008048.1 1588393 1589172 R hypothetical protein complement(1588393..1589172) Sphingopyxis alaskensis RB2256 4080037 YP_616570.1 CDS Sala_1524 NC_008048.1 1589271 1591052 D ABC transporter 1589271..1591052 Sphingopyxis alaskensis RB2256 4080038 YP_616571.1 CDS Sala_1525 NC_008048.1 1591160 1591906 R inositol monophosphatase complement(1591160..1591906) Sphingopyxis alaskensis RB2256 4082424 YP_616572.1 CDS Sala_1526 NC_008048.1 1591903 1593804 R in Rhizobium meliloti this protein is involved in the synthesis of nodulation factors that are active on the roots of alfalfa; catalyzes formation of activated sulfate intermediate; converts ATP and sulfate to diphosphate and adenylylsulfate and then ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; the activated intermediate is transferred to the nodulation factors by NodH; may interact with NodP and NodQ; similar to the CysD and CysN proteins from EScherichia coli involved in cysteine biosynthesis; bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase complement(1591903..1593804) Sphingopyxis alaskensis RB2256 4082425 YP_616573.1 CDS Sala_1527 NC_008048.1 1593804 1594709 R with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 complement(1593804..1594709) Sphingopyxis alaskensis RB2256 4082426 YP_616574.1 CDS Sala_1528 NC_008048.1 1594792 1595694 R LysR family transcriptional regulator complement(1594792..1595694) Sphingopyxis alaskensis RB2256 4082427 YP_616575.1 CDS Sala_1529 NC_008048.1 1595795 1596964 D acyl-CoA dehydrogenase-like protein 1595795..1596964 Sphingopyxis alaskensis RB2256 4082428 YP_616576.1 CDS Sala_1530 NC_008048.1 1596961 1597308 D hypothetical protein 1596961..1597308 Sphingopyxis alaskensis RB2256 4082429 YP_616577.1 CDS Sala_1531 NC_008048.1 1597305 1597583 D hypothetical protein 1597305..1597583 Sphingopyxis alaskensis RB2256 4082430 YP_616578.1 CDS Sala_1532 NC_008048.1 1597617 1599215 D propionyl-CoA carboxylase 1597617..1599215 Sphingopyxis alaskensis RB2256 4082431 YP_616579.1 CDS Sala_1533 NC_008048.1 1599221 1601059 D carbamoyl-phosphate synthase subunit L 1599221..1601059 Sphingopyxis alaskensis RB2256 4082432 YP_616580.1 CDS Sala_1534 NC_008048.1 1601227 1601679 D MaoC-like dehydratase 1601227..1601679 Sphingopyxis alaskensis RB2256 4082433 YP_616581.1 CDS Sala_1535 NC_008048.1 1601679 1602530 D citryl-CoA lyase 1601679..1602530 Sphingopyxis alaskensis RB2256 4082434 YP_616582.1 CDS Sala_1536 NC_008048.1 1602624 1604162 R phospholipase D/transphosphatidylase complement(1602624..1604162) Sphingopyxis alaskensis RB2256 4082435 YP_616583.1 CDS Sala_1537 NC_008048.1 1604167 1605969 R acyl-CoA dehydrogenase-like protein complement(1604167..1605969) Sphingopyxis alaskensis RB2256 4082436 YP_616584.1 CDS Sala_1538 NC_008048.1 1606042 1606503 R MerR family transcriptional regulator complement(1606042..1606503) Sphingopyxis alaskensis RB2256 4082437 YP_616585.1 CDS Sala_1539 NC_008048.1 1606534 1607067 R hypothetical protein complement(1606534..1607067) Sphingopyxis alaskensis RB2256 4082438 YP_616586.1 CDS Sala_1540 NC_008048.1 1607054 1607434 R phosphoribosyl-AMP cyclohydrolase complement(1607054..1607434) Sphingopyxis alaskensis RB2256 4082439 YP_616587.1 CDS Sala_1541 NC_008048.1 1607527 1609035 D Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 1607527..1609035 Sphingopyxis alaskensis RB2256 4082440 YP_616588.1 CDS Sala_1542 NC_008048.1 1609040 1609774 D short-chain dehydrogenase/reductase SDR 1609040..1609774 Sphingopyxis alaskensis RB2256 4082441 YP_616589.1 CDS Sala_1543 NC_008048.1 1609834 1610220 D hypothetical protein 1609834..1610220 Sphingopyxis alaskensis RB2256 4082442 YP_616590.1 CDS Sala_1544 NC_008048.1 1610318 1611487 R beta-lactamase complement(1610318..1611487) Sphingopyxis alaskensis RB2256 4082713 YP_616591.1 CDS Sala_1545 NC_008048.1 1611507 1612787 R cyclopropane-fatty-acyl-phospholipid synthase complement(1611507..1612787) Sphingopyxis alaskensis RB2256 4082714 YP_616592.1 CDS Sala_1546 NC_008048.1 1612866 1613825 R membrane-bound metal-dependent hydrolase complement(1612866..1613825) Sphingopyxis alaskensis RB2256 4082715 YP_616593.1 CDS Sala_1547 NC_008048.1 1613838 1614866 R catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin; 2-oxoglutarate ferredoxin oxidoreductase subunit beta complement(1613838..1614866) Sphingopyxis alaskensis RB2256 4082716 YP_616594.1 CDS Sala_1548 NC_008048.1 1614872 1616737 R pyruvate flavodoxin/ferredoxin oxidoreductase-like protein complement(1614872..1616737) Sphingopyxis alaskensis RB2256 4082717 YP_616595.1 CDS Sala_1549 NC_008048.1 1616922 1617869 D Alpha/beta hydrolase fold-3 1616922..1617869 Sphingopyxis alaskensis RB2256 4082718 YP_616596.1 CDS Sala_1550 NC_008048.1 1617866 1618342 D NUDIX hydrolase 1617866..1618342 Sphingopyxis alaskensis RB2256 4082719 YP_616597.1 CDS Sala_1551 NC_008048.1 1618454 1619116 R uracil-DNA glycosylase superfamily protein complement(1618454..1619116) Sphingopyxis alaskensis RB2256 4082720 YP_616598.1 CDS Sala_1552 NC_008048.1 1619140 1619661 D 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 1619140..1619661 Sphingopyxis alaskensis RB2256 4082721 YP_616599.1 CDS Sala_1553 NC_008048.1 1619856 1620863 D NAD-dependent epimerase/dehydratase 1619856..1620863 Sphingopyxis alaskensis RB2256 4082723 YP_616600.1 CDS Sala_1554 NC_008048.1 1620881 1621138 R hypothetical protein complement(1620881..1621138) Sphingopyxis alaskensis RB2256 4082724 YP_616601.1 CDS Sala_1555 NC_008048.1 1621163 1621429 R ECF subfamily RNA polymerase sigma-24 factor complement(1621163..1621429) Sphingopyxis alaskensis RB2256 4082725 YP_616602.1 CDS Sala_1556 NC_008048.1 1621504 1622208 R hypothetical protein complement(1621504..1622208) Sphingopyxis alaskensis RB2256 4082726 YP_616603.1 CDS Sala_1557 NC_008048.1 1622201 1623061 R hypothetical protein complement(1622201..1623061) Sphingopyxis alaskensis RB2256 4082727 YP_616604.1 CDS Sala_1558 NC_008048.1 1623066 1623371 R hypothetical protein complement(1623066..1623371) Sphingopyxis alaskensis RB2256 4082728 YP_616605.1 CDS Sala_1559 NC_008048.1 1623680 1624696 D UDP-glucose 4-epimerase 1623680..1624696 Sphingopyxis alaskensis RB2256 4082729 YP_616606.1 CDS Sala_1560 NC_008048.1 1624715 1625287 R hypothetical protein complement(1624715..1625287) Sphingopyxis alaskensis RB2256 4082730 YP_616607.1 CDS Sala_1561 NC_008048.1 1625678 1629898 R hypothetical protein complement(1625678..1629898) Sphingopyxis alaskensis RB2256 4082675 YP_616608.1 CDS Sala_1562 NC_008048.1 1629898 1632237 R surface antigen (D15) complement(1629898..1632237) Sphingopyxis alaskensis RB2256 4082676 YP_616609.1 CDS Sala_1563 NC_008048.1 1632372 1633565 R UDP-glucose 6-dehydrogenase complement(1632372..1633565) Sphingopyxis alaskensis RB2256 4082677 YP_616610.1 CDS Sala_1564 NC_008048.1 1633628 1635091 R hypothetical protein complement(1633628..1635091) Sphingopyxis alaskensis RB2256 4082678 YP_616611.1 CDS Sala_1565 NC_008048.1 1635235 1636851 R hypothetical protein complement(1635235..1636851) Sphingopyxis alaskensis RB2256 4082679 YP_616612.1 CDS Sala_1566 NC_008048.1 1636960 1637919 R NAD-dependent epimerase/dehydratase complement(1636960..1637919) Sphingopyxis alaskensis RB2256 4082680 YP_616613.1 CDS Sala_1567 NC_008048.1 1638125 1639534 D hypothetical protein 1638125..1639534 Sphingopyxis alaskensis RB2256 4082681 YP_616614.1 CDS Sala_1568 NC_008048.1 1639528 1640922 D hypothetical protein 1639528..1640922 Sphingopyxis alaskensis RB2256 4082682 YP_616615.1 CDS Sala_1569 NC_008048.1 1640935 1642302 D hypothetical protein 1640935..1642302 Sphingopyxis alaskensis RB2256 4082683 YP_616616.1 CDS Sala_1570 NC_008048.1 1642347 1643105 D glycosyl transferase family protein 1642347..1643105 Sphingopyxis alaskensis RB2256 4082684 YP_616617.1 CDS Sala_1571 NC_008048.1 1643120 1644007 R hypothetical protein complement(1643120..1644007) Sphingopyxis alaskensis RB2256 4082685 YP_616618.1 CDS Sala_1572 NC_008048.1 1644054 1645562 R polysaccharide biosynthesis protein complement(1644054..1645562) Sphingopyxis alaskensis RB2256 4082686 YP_616619.1 CDS Sala_1573 NC_008048.1 1645575 1647077 R DegT/DnrJ/EryC1/StrS aminotransferase complement(1645575..1647077) Sphingopyxis alaskensis RB2256 4082687 YP_616620.1 CDS Sala_1574 NC_008048.1 1647074 1647727 R putative serine O-acetyltransferase complement(1647074..1647727) Sphingopyxis alaskensis RB2256 4082688 YP_616621.1 CDS Sala_1575 NC_008048.1 1647738 1648880 R UDP-N-acetylglucosamine 2-epimerase complement(1647738..1648880) Sphingopyxis alaskensis RB2256 4082689 YP_616622.1 CDS Sala_1576 NC_008048.1 1648877 1649929 R N-acylneuraminate-9-phosphate synthase complement(1648877..1649929) Sphingopyxis alaskensis RB2256 4082690 YP_616623.1 CDS Sala_1577 NC_008048.1 1649923 1650720 R short-chain dehydrogenase/reductase SDR complement(1649923..1650720) Sphingopyxis alaskensis RB2256 4082691 YP_616624.1 CDS Sala_1578 NC_008048.1 1650717 1651409 R acylneuraminate cytidylyltransferase complement(1650717..1651409) Sphingopyxis alaskensis RB2256 4082692 YP_616625.1 CDS Sala_1579 NC_008048.1 1651406 1652407 R oxidoreductase-like protein complement(1651406..1652407) Sphingopyxis alaskensis RB2256 4083016 YP_616626.1 CDS Sala_1580 NC_008048.1 1652398 1654647 R N-acylneuraminate-9-phosphate synthase complement(1652398..1654647) Sphingopyxis alaskensis RB2256 4083017 YP_616627.1 CDS Sala_1581 NC_008048.1 1654644 1655327 R acylneuraminate cytidylyltransferase complement(1654644..1655327) Sphingopyxis alaskensis RB2256 4083018 YP_616628.1 CDS Sala_1582 NC_008048.1 1655327 1656631 R hypothetical protein complement(1655327..1656631) Sphingopyxis alaskensis RB2256 4083019 YP_616629.1 CDS Sala_1583 NC_008048.1 1656624 1658837 R protein-tyrosine kinase complement(1656624..1658837) Sphingopyxis alaskensis RB2256 4083020 YP_616630.1 CDS Sala_1584 NC_008048.1 1659023 1660414 R O-antigen polymerase complement(1659023..1660414) Sphingopyxis alaskensis RB2256 4083021 YP_616631.1 CDS Sala_1585 NC_008048.1 1660411 1662372 R polysaccharide biosynthesis protein CapD complement(1660411..1662372) Sphingopyxis alaskensis RB2256 4083022 YP_616632.1 CDS Sala_1586 NC_008048.1 1662430 1662993 R sugar transferase complement(1662430..1662993) Sphingopyxis alaskensis RB2256 4083023 YP_616633.1 CDS Sala_1587 NC_008048.1 1662990 1663922 R NAD-dependent epimerase/dehydratase complement(1662990..1663922) Sphingopyxis alaskensis RB2256 4083024 YP_616634.1 CDS Sala_1588 NC_008048.1 1663976 1664749 R polysaccharide export protein complement(1663976..1664749) Sphingopyxis alaskensis RB2256 4083025 YP_616635.1 CDS Sala_1589 NC_008048.1 1664934 1665701 R metallophosphoesterase complement(1664934..1665701) Sphingopyxis alaskensis RB2256 4083026 YP_616636.1 CDS Sala_1590 NC_008048.1 1665926 1667050 D UDP-N-acetylglucosamine 2-epimerase 1665926..1667050 Sphingopyxis alaskensis RB2256 4083027 YP_616637.1 CDS Sala_1591 NC_008048.1 1667037 1668332 D UDP-glucose/GDP-mannose dehydrogenase 1667037..1668332 Sphingopyxis alaskensis RB2256 4083028 YP_616638.1 CDS Sala_1592 NC_008048.1 1668378 1669184 D phosphomannose isomerase-like protein 1668378..1669184 Sphingopyxis alaskensis RB2256 4083029 YP_616639.1 CDS Sala_1593 NC_008048.1 1669207 1670280 D mannose-1-phosphate guanylyltransferase (GDP) 1669207..1670280 Sphingopyxis alaskensis RB2256 4083030 YP_616640.1 CDS Sala_1594 NC_008048.1 1670334 1670900 D heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 1670334..1670900 Sphingopyxis alaskensis RB2256 4083031 YP_616641.1 CDS hslU NC_008048.1 1670905 1672206 D heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 1670905..1672206 Sphingopyxis alaskensis RB2256 4083032 YP_616642.1 CDS Sala_1596 NC_008048.1 1672711 1673568 D XRE family transcriptional regulator 1672711..1673568 Sphingopyxis alaskensis RB2256 4083033 YP_616643.1 CDS Sala_1597 NC_008048.1 1673683 1674624 D hypothetical protein 1673683..1674624 Sphingopyxis alaskensis RB2256 4083034 YP_616644.1 CDS Sala_1598 NC_008048.1 1674728 1675582 D tRNA(Ile)-lysidine synthetase-like protein 1674728..1675582 Sphingopyxis alaskensis RB2256 4083035 YP_616645.1 CDS Sala_1599 NC_008048.1 1675663 1677606 D ATP-dependent metalloprotease FtsH 1675663..1677606 Sphingopyxis alaskensis RB2256 4082751 YP_616646.1 CDS Sala_1600 NC_008048.1 1677659 1678054 D hypothetical protein 1677659..1678054 Sphingopyxis alaskensis RB2256 4082752 YP_616647.1 CDS Sala_1601 NC_008048.1 1678467 1679204 D hypothetical protein 1678467..1679204 Sphingopyxis alaskensis RB2256 4082753 YP_616648.1 CDS Sala_1602 NC_008048.1 1679430 1679774 R Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega complement(1679430..1679774) Sphingopyxis alaskensis RB2256 4082754 YP_616649.1 CDS Sala_1603 NC_008048.1 1679910 1681100 D phospholipase D/transphosphatidylase 1679910..1681100 Sphingopyxis alaskensis RB2256 4082755 YP_616650.1 CDS Sala_1604 NC_008048.1 1681104 1681742 R type 12 methyltransferase complement(1681104..1681742) Sphingopyxis alaskensis RB2256 4082756 YP_616651.1 CDS Sala_1605 NC_008048.1 1681887 1683209 D major facilitator superfamily transporter 1681887..1683209 Sphingopyxis alaskensis RB2256 4082757 YP_616652.1 CDS Sala_1606 NC_008048.1 1683270 1685591 R ATPase AAA complement(1683270..1685591) Sphingopyxis alaskensis RB2256 4082758 YP_616653.1 CDS Sala_1607 NC_008048.1 1685734 1686612 D LysR family transcriptional regulator 1685734..1686612 Sphingopyxis alaskensis RB2256 4082759 YP_616654.1 CDS Sala_1608 NC_008048.1 1686942 1687184 R hypothetical protein complement(1686942..1687184) Sphingopyxis alaskensis RB2256 4082761 YP_616655.1 CDS Sala_1609 NC_008048.1 1687263 1688273 R putative secreted peptidyl prolyl cis-trans isomerase, cyclophilin type complement(1687263..1688273) Sphingopyxis alaskensis RB2256 4082762 YP_616656.1 CDS Sala_1610 NC_008048.1 1688690 1691347 R catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate phosphate dikinase complement(1688690..1691347) Sphingopyxis alaskensis RB2256 4082765 YP_616657.1 CDS Sala_1611 NC_008048.1 1691545 1693716 R glycine--tRNA ligase complement(1691545..1693716) Sphingopyxis alaskensis RB2256 4082766 YP_616658.1 CDS glyQ NC_008048.1 1693853 1694842 R glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha complement(1693853..1694842) Sphingopyxis alaskensis RB2256 4081885 YP_616659.1 CDS Sala_1613 NC_008048.1 1694978 1695193 D XRE family transcriptional regulator 1694978..1695193 Sphingopyxis alaskensis RB2256 4081886 YP_616660.1 CDS Sala_1614 NC_008048.1 1695219 1695794 D hypothetical protein 1695219..1695794 Sphingopyxis alaskensis RB2256 4081887 YP_616661.1 CDS Sala_1615 NC_008048.1 1695860 1696831 D GumN protein 1695860..1696831 Sphingopyxis alaskensis RB2256 4081888 YP_616662.1 CDS Sala_1616 NC_008048.1 1696828 1697727 D GumN protein 1696828..1697727 Sphingopyxis alaskensis RB2256 4081889 YP_616663.1 CDS Sala_1617 NC_008048.1 1697878 1698516 D the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc 1697878..1698516 Sphingopyxis alaskensis RB2256 4081890 YP_616664.1 CDS Sala_1618 NC_008048.1 1698583 1699152 D Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 1698583..1699152 Sphingopyxis alaskensis RB2256 4081891 YP_616665.1 CDS Sala_1619 NC_008048.1 1699270 1700259 D short-chain dehydrogenase/reductase SDR 1699270..1700259 Sphingopyxis alaskensis RB2256 4081892 YP_616666.1 CDS Sala_1620 NC_008048.1 1700273 1700926 R Allergen V5/Tpx-1 related complement(1700273..1700926) Sphingopyxis alaskensis RB2256 4081893 YP_616667.1 CDS Sala_1621 NC_008048.1 1701043 1702140 D translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 1701043..1702140 Sphingopyxis alaskensis RB2256 4081894 YP_616668.1 CDS Sala_1622 NC_008048.1 1702201 1702488 D excinuclease ABC subunit C 1702201..1702488 Sphingopyxis alaskensis RB2256 4081895 YP_616669.1 CDS Sala_1623 NC_008048.1 1702552 1702953 R MerR family transcriptional regulator complement(1702552..1702953) Sphingopyxis alaskensis RB2256 4081896 YP_616670.1 CDS Sala_1624 NC_008048.1 1702995 1703732 D hypothetical protein 1702995..1703732 Sphingopyxis alaskensis RB2256 4081897 YP_616671.1 CDS Sala_1625 NC_008048.1 1703813 1705378 D twin-arginine translocation pathway signal 1703813..1705378 Sphingopyxis alaskensis RB2256 4081898 YP_616672.1 CDS mutL NC_008048.1 1705394 1707205 R This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein complement(1705394..1707205) Sphingopyxis alaskensis RB2256 4081899 YP_616673.1 CDS Sala_1627 NC_008048.1 1707402 1708448 D functions in MreBCD complex in some organisms; rod shape-determining protein MreB 1707402..1708448 Sphingopyxis alaskensis RB2256 4081900 YP_616674.1 CDS Sala_1628 NC_008048.1 1708466 1709368 D in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 1708466..1709368 Sphingopyxis alaskensis RB2256 4081901 YP_616675.1 CDS Sala_1629 NC_008048.1 1709365 1709886 D hypothetical protein 1709365..1709886 Sphingopyxis alaskensis RB2256 4081902 YP_616676.1 CDS Sala_1630 NC_008048.1 1709897 1711807 D peptidoglycan glycosyltransferase 1709897..1711807 Sphingopyxis alaskensis RB2256 4081903 YP_616677.1 CDS Sala_1631 NC_008048.1 1711942 1712910 D rod shape-determining protein RodA 1711942..1712910 Sphingopyxis alaskensis RB2256 4081904 YP_616678.1 CDS Sala_1632 NC_008048.1 1713547 1714770 R acyl-CoA dehydrogenase-like protein complement(1713547..1714770) Sphingopyxis alaskensis RB2256 4080710 YP_616679.1 CDS Sala_1633 NC_008048.1 1714784 1715875 R acyl-CoA dehydrogenase-like protein complement(1714784..1715875) Sphingopyxis alaskensis RB2256 4080711 YP_616680.1 CDS Sala_1634 NC_008048.1 1715966 1716766 D enoyl-CoA hydratase/isomerase 1715966..1716766 Sphingopyxis alaskensis RB2256 4080712 YP_616681.1 CDS Sala_1635 NC_008048.1 1716792 1717880 D acyl-CoA dehydrogenase-like protein 1716792..1717880 Sphingopyxis alaskensis RB2256 4080713 YP_616682.1 CDS Sala_1636 NC_008048.1 1717877 1719082 D acyl-CoA dehydrogenase-like protein 1717877..1719082 Sphingopyxis alaskensis RB2256 4080714 YP_616683.1 CDS Sala_1637 NC_008048.1 1719101 1720351 D Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 1719101..1720351 Sphingopyxis alaskensis RB2256 4080715 YP_616684.1 CDS Sala_1638 NC_008048.1 1720378 1721358 D 2-nitropropane dioxygenase 1720378..1721358 Sphingopyxis alaskensis RB2256 4080716 YP_616685.1 CDS Sala_1639 NC_008048.1 1721785 1722630 D ATPase 1721785..1722630 Sphingopyxis alaskensis RB2256 4080717 YP_616686.1 CDS Sala_1640 NC_008048.1 1722635 1723051 D hypothetical protein 1722635..1723051 Sphingopyxis alaskensis RB2256 4080718 YP_616687.1 CDS Sala_1641 NC_008048.1 1723042 1724484 R methyl-accepting chemotaxis sensory transducer complement(1723042..1724484) Sphingopyxis alaskensis RB2256 4080719 YP_616688.1 CDS Sala_1642 NC_008048.1 1724741 1725919 D hypothetical protein 1724741..1725919 Sphingopyxis alaskensis RB2256 4080720 YP_616689.1 CDS Sala_1643 NC_008048.1 1726074 1726880 D hypothetical protein 1726074..1726880 Sphingopyxis alaskensis RB2256 4080721 YP_616690.1 CDS Sala_1644 NC_008048.1 1726873 1727730 D hypothetical protein 1726873..1727730 Sphingopyxis alaskensis RB2256 4080722 YP_616691.1 CDS Sala_1645 NC_008048.1 1727824 1729068 R twin-arginine translocation pathway signal complement(1727824..1729068) Sphingopyxis alaskensis RB2256 4080723 YP_616692.1 CDS Sala_1646 NC_008048.1 1729080 1730288 R hypothetical protein complement(1729080..1730288) Sphingopyxis alaskensis RB2256 4080724 YP_616693.1 CDS Sala_1647 NC_008048.1 1730285 1730851 R hypothetical protein complement(1730285..1730851) Sphingopyxis alaskensis RB2256 4080725 YP_616694.1 CDS Sala_1648 NC_008048.1 1730852 1731205 R excinuclease ABC subunit C complement(1730852..1731205) Sphingopyxis alaskensis RB2256 4080726 YP_616695.1 CDS Sala_1649 NC_008048.1 1731220 1732488 D tyrosyl-tRNA synthetase 1731220..1732488 Sphingopyxis alaskensis RB2256 4080957 YP_616696.1 CDS Sala_1650 NC_008048.1 1732562 1732903 D type IV pilus assembly PilZ 1732562..1732903 Sphingopyxis alaskensis RB2256 4080958 YP_616697.1 CDS Sala_1651 NC_008048.1 1732973 1735078 R DEAD/DEAH box helicase complement(1732973..1735078) Sphingopyxis alaskensis RB2256 4080959 YP_616698.1 CDS Sala_1652 NC_008048.1 1735286 1735546 D hypothetical protein 1735286..1735546 Sphingopyxis alaskensis RB2256 4080960 YP_616699.1 CDS Sala_1653 NC_008048.1 1735543 1739127 D transcription-repair coupling factor 1735543..1739127 Sphingopyxis alaskensis RB2256 4080961 YP_616700.1 CDS Sala_1654 NC_008048.1 1739233 1740429 R diguanylate cyclase/phosphodiesterase complement(1739233..1740429) Sphingopyxis alaskensis RB2256 4080962 YP_616701.1 CDS Sala_1655 NC_008048.1 1740492 1741505 D molybdenum cofactor synthesis-like protein 1740492..1741505 Sphingopyxis alaskensis RB2256 4080963 YP_616702.1 CDS ppnK NC_008048.1 1741537 1742307 D catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase 1741537..1742307 Sphingopyxis alaskensis RB2256 4080964 YP_616703.1 CDS Sala_1657 NC_008048.1 1742646 1743242 R 3,4-dihydroxy-2-butanone 4-phosphate synthase complement(1742646..1743242) Sphingopyxis alaskensis RB2256 4080966 YP_616704.1 CDS Sala_1658 NC_008048.1 1743243 1743818 R NADPH-dependent FMN reductase complement(1743243..1743818) Sphingopyxis alaskensis RB2256 4080967 YP_616705.1 CDS Sala_1659 NC_008048.1 1743815 1745290 R in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; glycerol-3-phosphate dehydrogenase complement(1743815..1745290) Sphingopyxis alaskensis RB2256 4080968 YP_616706.1 CDS Sala_1660 NC_008048.1 1745320 1746408 R alkanesulfonate monooxygenase complement(1745320..1746408) Sphingopyxis alaskensis RB2256 4080969 YP_616707.1 CDS Sala_1661 NC_008048.1 1746483 1747397 R aldo/keto reductase complement(1746483..1747397) Sphingopyxis alaskensis RB2256 4080970 YP_616708.1 CDS Sala_1662 NC_008048.1 1747394 1748407 R LacI family transcriptional regulator complement(1747394..1748407) Sphingopyxis alaskensis RB2256 4080971 YP_616709.1 CDS Sala_1663 NC_008048.1 1748404 1750449 R alpha-glucosidase complement(1748404..1750449) Sphingopyxis alaskensis RB2256 4080972 YP_616710.1 CDS Sala_1664 NC_008048.1 1750515 1752908 D TonB-dependent receptor 1750515..1752908 Sphingopyxis alaskensis RB2256 4080973 YP_616711.1 CDS Sala_1665 NC_008048.1 1753134 1753391 R hypothetical protein complement(1753134..1753391) Sphingopyxis alaskensis RB2256 4080974 YP_616712.1 CDS Sala_1666 NC_008048.1 1753403 1754638 R major facilitator superfamily transporter complement(1753403..1754638) Sphingopyxis alaskensis RB2256 4080975 YP_616713.1 CDS Sala_1667 NC_008048.1 1754744 1755844 D hypothetical protein 1754744..1755844 Sphingopyxis alaskensis RB2256 4081050 YP_616714.1 CDS Sala_1668 NC_008048.1 1755865 1757178 R catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase complement(1755865..1757178) Sphingopyxis alaskensis RB2256 4081051 YP_616715.1 CDS Sala_1669 NC_008048.1 1757465 1757620 R cbb3-type cytochrome oxidase maturation protein complement(1757465..1757620) Sphingopyxis alaskensis RB2256 4081052 YP_616716.1 CDS Sala_1670 NC_008048.1 1757617 1759563 R heavy metal translocating P-type ATPase complement(1757617..1759563) Sphingopyxis alaskensis RB2256 4081053 YP_616717.1 CDS Sala_1671 NC_008048.1 1759728 1760198 R integral membrane protein linked to a cation pump-like protein complement(1759728..1760198) Sphingopyxis alaskensis RB2256 4081054 YP_616718.1 CDS Sala_1672 NC_008048.1 1760195 1761652 R 4Fe-4S ferredoxin complement(1760195..1761652) Sphingopyxis alaskensis RB2256 4081055 YP_616719.1 CDS Sala_1673 NC_008048.1 1761639 1762562 R cytochrome c oxidase, cbb3-type subunit III complement(1761639..1762562) Sphingopyxis alaskensis RB2256 4081056 YP_616720.1 CDS Sala_1674 NC_008048.1 1762555 1762713 R cbb3-type cytochrome oxidase subunit complement(1762555..1762713) Sphingopyxis alaskensis RB2256 4081057 YP_616721.1 CDS Sala_1675 NC_008048.1 1762710 1763474 R CcoO; FixO; cbb3-type cytochrome c oxidase subunit II complement(1762710..1763474) Sphingopyxis alaskensis RB2256 4081058 YP_616722.1 CDS Sala_1676 NC_008048.1 1763487 1765145 R CcoN; FixN; cbb3-type cytochrome c oxidase subunit I complement(1763487..1765145) Sphingopyxis alaskensis RB2256 4081059 YP_616723.1 CDS Sala_1677 NC_008048.1 1765313 1765984 D OmpW protein 1765313..1765984 Sphingopyxis alaskensis RB2256 4081060 YP_616724.1 CDS Sala_1678 NC_008048.1 1765994 1766686 R Crp/FNR family transcriptional regulator complement(1765994..1766686) Sphingopyxis alaskensis RB2256 4081061 YP_616725.1 CDS Sala_1679 NC_008048.1 1766872 1767681 R hypothetical protein complement(1766872..1767681) Sphingopyxis alaskensis RB2256 4081062 YP_616726.1 CDS Sala_1680 NC_008048.1 1767810 1768754 R hypothetical protein complement(1767810..1768754) Sphingopyxis alaskensis RB2256 4081063 YP_616727.1 CDS Sala_1681 NC_008048.1 1768754 1768984 R hypothetical protein complement(1768754..1768984) Sphingopyxis alaskensis RB2256 4081064 YP_616728.1 CDS Sala_1682 NC_008048.1 1769047 1770798 R kinesin K39 complement(1769047..1770798) Sphingopyxis alaskensis RB2256 4081065 YP_616729.1 CDS Sala_1683 NC_008048.1 1770770 1772152 R radical SAM family protein complement(1770770..1772152) Sphingopyxis alaskensis RB2256 4081066 YP_616730.1 CDS Sala_1684 NC_008048.1 1772305 1774206 R radical SAM family protein complement(1772305..1774206) Sphingopyxis alaskensis RB2256 4081067 YP_616731.1 CDS Sala_1685 NC_008048.1 1774222 1774794 R hypothetical protein complement(1774222..1774794) Sphingopyxis alaskensis RB2256 4081068 YP_616732.1 CDS Sala_1686 NC_008048.1 1774937 1775617 R GntR family transcriptional regulator complement(1774937..1775617) Sphingopyxis alaskensis RB2256 4081089 YP_616733.1 CDS Sala_1687 NC_008048.1 1775614 1776963 R catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glutamate; N-formimino-L-glutamate deiminase complement(1775614..1776963) Sphingopyxis alaskensis RB2256 4081090 YP_616734.1 CDS Sala_1688 NC_008048.1 1776993 1778204 D imidazolonepropionase 1776993..1778204 Sphingopyxis alaskensis RB2256 4081091 YP_616735.1 CDS Sala_1689 NC_008048.1 1778201 1779730 D catalyzes the degradation of histidine to urocanate and ammmonia; histidine ammonia-lyase 1778201..1779730 Sphingopyxis alaskensis RB2256 4081092 YP_616736.1 CDS Sala_1690 NC_008048.1 1779730 1780533 D N-formylglutamate amidohydrolase 1779730..1780533 Sphingopyxis alaskensis RB2256 4081093 YP_616737.1 CDS Sala_1691 NC_008048.1 1780530 1782191 D catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism; urocanate hydratase 1780530..1782191 Sphingopyxis alaskensis RB2256 4081094 YP_616738.1 CDS Sala_1692 NC_008048.1 1782267 1783430 D acyl-CoA dehydrogenase-like protein 1782267..1783430 Sphingopyxis alaskensis RB2256 4081095 YP_616739.1 CDS Sala_1693 NC_008048.1 1783430 1784266 D hypothetical protein 1783430..1784266 Sphingopyxis alaskensis RB2256 4081096 YP_616740.1 CDS Sala_1694 NC_008048.1 1784487 1785284 D hypothetical protein 1784487..1785284 Sphingopyxis alaskensis RB2256 4081097 YP_616741.1 CDS Sala_1695 NC_008048.1 1785381 1787165 R PAS/PAC sensor-containing diguanylate cyclase complement(1785381..1787165) Sphingopyxis alaskensis RB2256 4081098 YP_616742.1 CDS Sala_1696 NC_008048.1 1787227 1787835 R TetR family transcriptional regulator complement(1787227..1787835) Sphingopyxis alaskensis RB2256 4081099 YP_616743.1 CDS Sala_1697 NC_008048.1 1787886 1788254 D hypothetical protein 1787886..1788254 Sphingopyxis alaskensis RB2256 4081100 YP_616744.1 CDS Sala_1698 NC_008048.1 1788271 1789713 D carotenoid oxygenase 1788271..1789713 Sphingopyxis alaskensis RB2256 4081101 YP_616745.1 CDS Sala_1699 NC_008048.1 1789793 1791037 D hypothetical protein 1789793..1791037 Sphingopyxis alaskensis RB2256 4081102 YP_616746.1 CDS rplL NC_008048.1 1791135 1791512 R present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 complement(1791135..1791512) Sphingopyxis alaskensis RB2256 4081103 YP_616747.1 CDS rplJ NC_008048.1 1791571 1792086 R binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 complement(1791571..1792086) Sphingopyxis alaskensis RB2256 4081104 YP_616748.1 CDS Sala_1702 NC_008048.1 1792507 1792812 D hypothetical protein 1792507..1792812 Sphingopyxis alaskensis RB2256 4081105 YP_616749.1 CDS Sala_1703 NC_008048.1 1792831 1793469 R hypothetical protein complement(1792831..1793469) Sphingopyxis alaskensis RB2256 4081106 YP_616750.1 CDS Sala_1704 NC_008048.1 1793509 1794906 R amino acid permease complement(1793509..1794906) Sphingopyxis alaskensis RB2256 4081107 YP_616751.1 CDS obgE NC_008048.1 1795038 1796084 D essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 1795038..1796084 Sphingopyxis alaskensis RB2256 4081108 YP_616752.1 CDS Sala_1706 NC_008048.1 1796119 1797180 R type 12 methyltransferase complement(1796119..1797180) Sphingopyxis alaskensis RB2256 4081283 YP_616753.1 CDS recF NC_008048.1 1797330 1798439 R Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F complement(1797330..1798439) Sphingopyxis alaskensis RB2256 4081284 YP_616754.1 CDS Sala_1708 NC_008048.1 1798882 1799061 D phage shock protein C, PspC 1798882..1799061 Sphingopyxis alaskensis RB2256 4081285 YP_616755.1 CDS Sala_1709 NC_008048.1 1799155 1800294 R alcohol dehydrogenase GroES-like protein complement(1799155..1800294) Sphingopyxis alaskensis RB2256 4081286 YP_616756.1 CDS Sala_1710 NC_008048.1 1800501 1801067 R hypothetical protein complement(1800501..1801067) Sphingopyxis alaskensis RB2256 4081287 YP_616757.1 CDS Sala_1711 NC_008048.1 1801073 1801633 D XRE family transcriptional regulator 1801073..1801633 Sphingopyxis alaskensis RB2256 4081288 YP_616758.1 CDS Sala_1712 NC_008048.1 1801740 1802906 D group 1 glycosyl transferase 1801740..1802906 Sphingopyxis alaskensis RB2256 4081289 YP_616759.1 CDS Sala_1713 NC_008048.1 1803090 1804073 R SecF protein complement(1803090..1804073) Sphingopyxis alaskensis RB2256 4081290 YP_616760.1 CDS secD NC_008048.1 1804090 1805703 R part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD complement(1804090..1805703) Sphingopyxis alaskensis RB2256 4081291 YP_616761.1 CDS Sala_1715 NC_008048.1 1805760 1806296 R preprotein translocase subunit YajC complement(1805760..1806296) Sphingopyxis alaskensis RB2256 4081292 YP_616762.1 CDS Sala_1716 NC_008048.1 1806504 1807481 R zinc-binding alcohol dehydrogenase complement(1806504..1807481) Sphingopyxis alaskensis RB2256 4081294 YP_616763.1 CDS Sala_1717 NC_008048.1 1807554 1808123 D hypothetical protein 1807554..1808123 Sphingopyxis alaskensis RB2256 4081295 YP_616764.1 CDS Sala_1718 NC_008048.1 1808177 1808590 D hypothetical protein 1808177..1808590 Sphingopyxis alaskensis RB2256 4081296 YP_616765.1 CDS Sala_1719 NC_008048.1 1808694 1809179 R hypothetical protein complement(1808694..1809179) Sphingopyxis alaskensis RB2256 4081297 YP_616766.1 CDS alaS NC_008048.1 1809176 1811830 R Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase complement(1809176..1811830) Sphingopyxis alaskensis RB2256 4081298 YP_616767.1 CDS Sala_1721 NC_008048.1 1811903 1812478 R hypothetical protein complement(1811903..1812478) Sphingopyxis alaskensis RB2256 4081299 YP_616768.1 CDS Sala_1722 NC_008048.1 1812468 1813094 R glutathione S-transferase-like protein complement(1812468..1813094) Sphingopyxis alaskensis RB2256 4081300 YP_616769.1 CDS Sala_1723 NC_008048.1 1813120 1813935 R arginase/agmatinase/formiminoglutamase complement(1813120..1813935) Sphingopyxis alaskensis RB2256 4081185 YP_616770.1 CDS Sala_1724 NC_008048.1 1814021 1814335 R hypothetical protein complement(1814021..1814335) Sphingopyxis alaskensis RB2256 4081186 YP_616771.1 CDS recA NC_008048.1 1814454 1815536 R catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A complement(1814454..1815536) Sphingopyxis alaskensis RB2256 4081187 YP_616772.1 CDS Sala_1726 NC_008048.1 1815689 1816036 R response regulator receiver protein complement(1815689..1816036) Sphingopyxis alaskensis RB2256 4081188 YP_616773.1 CDS Sala_1727 NC_008048.1 1816029 1818410 R periplasmic sensor hybrid histidine kinase complement(1816029..1818410) Sphingopyxis alaskensis RB2256 4081189 YP_616774.1 CDS Sala_1728 NC_008048.1 1818503 1820563 R endothelin-converting protein 1 complement(1818503..1820563) Sphingopyxis alaskensis RB2256 4081190 YP_616775.1 CDS Sala_1729 NC_008048.1 1820660 1821325 R hypothetical protein complement(1820660..1821325) Sphingopyxis alaskensis RB2256 4081191 YP_616776.1 CDS smpB NC_008048.1 1821322 1821807 R binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein complement(1821322..1821807) Sphingopyxis alaskensis RB2256 4081192 YP_616777.1 CDS Sala_1731 NC_008048.1 1821946 1822821 R catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase complement(1821946..1822821) Sphingopyxis alaskensis RB2256 4081193 YP_616778.1 CDS Sala_1732 NC_008048.1 1822922 1824961 D lytic transglycosylase, catalytic 1822922..1824961 Sphingopyxis alaskensis RB2256 4081194 YP_616779.1 CDS Sala_1733 NC_008048.1 1824969 1825451 D transcription elongation factor GreB 1824969..1825451 Sphingopyxis alaskensis RB2256 4081195 YP_616780.1 CDS Sala_1734 NC_008048.1 1825455 1827167 R peptidase C14, caspase catalytic subunit p20 complement(1825455..1827167) Sphingopyxis alaskensis RB2256 4081196 YP_616781.1 CDS Sala_1735 NC_008048.1 1828067 1828756 R N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD complement(1828067..1828756) Sphingopyxis alaskensis RB2256 4081197 YP_616782.1 CDS Sala_1736 NC_008048.1 1828824 1829696 R chemotaxis protein CheR complement(1828824..1829696) Sphingopyxis alaskensis RB2256 4081198 YP_616783.1 CDS Sala_1737 NC_008048.1 1829693 1830805 R response regulator receiver modulated CheB methylesterase complement(1829693..1830805) Sphingopyxis alaskensis RB2256 4081199 YP_616784.1 CDS Sala_1738 NC_008048.1 1830824 1831198 R response regulator receiver protein complement(1830824..1831198) Sphingopyxis alaskensis RB2256 4081200 YP_616785.1 CDS Sala_1739 NC_008048.1 1831275 1831712 R CheW protein complement(1831275..1831712) Sphingopyxis alaskensis RB2256 4081201 YP_616786.1 CDS Sala_1740 NC_008048.1 1831709 1834132 R CheA signal transduction histidine kinase complement(1831709..1834132) Sphingopyxis alaskensis RB2256 4081202 YP_616787.1 CDS Sala_1741 NC_008048.1 1834173 1834817 R hypothetical protein complement(1834173..1834817) Sphingopyxis alaskensis RB2256 4081203 YP_616788.1 CDS Sala_1742 NC_008048.1 1834820 1835950 D pseudouridine synthase RluD 1834820..1835950 Sphingopyxis alaskensis RB2256 4081204 YP_616789.1 CDS Sala_1743 NC_008048.1 1836030 1836932 D binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32 1836030..1836932 Sphingopyxis alaskensis RB2256 4081978 YP_616790.1 CDS Sala_1744 NC_008048.1 1837022 1837810 D response regulator receiver protein 1837022..1837810 Sphingopyxis alaskensis RB2256 4081979 YP_616791.1 CDS Sala_1745 NC_008048.1 1837889 1838986 D peptidase M23B 1837889..1838986 Sphingopyxis alaskensis RB2256 4081980 YP_616792.1 CDS Sala_1746 NC_008048.1 1839060 1839701 D hypothetical protein 1839060..1839701 Sphingopyxis alaskensis RB2256 4081981 YP_616793.1 CDS Sala_1747 NC_008048.1 1839761 1840468 D monofunctional biosynthetic peptidoglycan transglycosylase 1839761..1840468 Sphingopyxis alaskensis RB2256 4081982 YP_616794.1 CDS Sala_1748 NC_008048.1 1840669 1841214 R heat shock protein DnaJ-like protein complement(1840669..1841214) Sphingopyxis alaskensis RB2256 4081983 YP_616795.1 CDS Sala_1749 NC_008048.1 1841266 1842057 R hypothetical protein complement(1841266..1842057) Sphingopyxis alaskensis RB2256 4081984 YP_616796.1 CDS Sala_1750 NC_008048.1 1842156 1843028 R alpha/beta hydrolase complement(1842156..1843028) Sphingopyxis alaskensis RB2256 4081985 YP_616797.1 CDS aspS NC_008048.1 1843032 1844891 R catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase complement(1843032..1844891) Sphingopyxis alaskensis RB2256 4081986 YP_616798.1 CDS Sala_1752 NC_008048.1 1845105 1846292 D ribonuclease D 1845105..1846292 Sphingopyxis alaskensis RB2256 4081987 YP_616799.1 CDS Sala_1753 NC_008048.1 1846348 1847847 R Ppx/GppA phosphatase complement(1846348..1847847) Sphingopyxis alaskensis RB2256 4081988 YP_616800.1 CDS Sala_1754 NC_008048.1 1847844 1850012 R catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase complement(1847844..1850012) Sphingopyxis alaskensis RB2256 4081989 YP_616801.1 CDS Sala_1755 NC_008048.1 1850003 1850665 R DNA replication initiation ATPase complement(1850003..1850665) Sphingopyxis alaskensis RB2256 4081990 YP_616802.1 CDS Sala_1756 NC_008048.1 1850665 1851939 R hypothetical protein complement(1850665..1851939) Sphingopyxis alaskensis RB2256 4081991 YP_616803.1 CDS Sala_1757 NC_008048.1 1852025 1853131 D catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 1852025..1853131 Sphingopyxis alaskensis RB2256 4081992 YP_616804.1 CDS Sala_1758 NC_008048.1 1853279 1854226 D phosphoribosylglycinamide formyltransferase 1853279..1854226 Sphingopyxis alaskensis RB2256 4081993 YP_616805.1 CDS ndk NC_008048.1 1854284 1854706 R catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase complement(1854284..1854706) Sphingopyxis alaskensis RB2256 4081994 YP_616806.1 CDS Sala_1760 NC_008048.1 1854793 1855242 R DNA polymerase III chi subunit, HolC complement(1854793..1855242) Sphingopyxis alaskensis RB2256 4081995 YP_616807.1 CDS Sala_1761 NC_008048.1 1855377 1856822 R catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase complement(1855377..1856822) Sphingopyxis alaskensis RB2256 4081996 YP_616808.1 CDS Sala_1762 NC_008048.1 1856955 1859258 D organic solvent tolerance protein 1856955..1859258 Sphingopyxis alaskensis RB2256 4082074 YP_616809.1 CDS Sala_1763 NC_008048.1 1859454 1861019 R AMP-dependent synthetase and ligase complement(1859454..1861019) Sphingopyxis alaskensis RB2256 4082075 YP_616810.1 CDS Sala_1764 NC_008048.1 1861278 1861526 D hypothetical protein 1861278..1861526 Sphingopyxis alaskensis RB2256 4082076 YP_616811.1 CDS Sala_1765 NC_008048.1 1861545 1862567 R aminoglycoside phosphotransferase complement(1861545..1862567) Sphingopyxis alaskensis RB2256 4082077 YP_616812.1 CDS Sala_1766 NC_008048.1 1862613 1863035 R hypothetical protein complement(1862613..1863035) Sphingopyxis alaskensis RB2256 4082078 YP_616813.1 CDS Sala_1767 NC_008048.1 1863452 1864402 D integrase catalytic subunit 1863452..1864402 Sphingopyxis alaskensis RB2256 4082079 YP_616814.1 CDS Sala_1768 NC_008048.1 1864453 1864908 D MarR family transcriptional regulator 1864453..1864908 Sphingopyxis alaskensis RB2256 4082080 YP_616815.1 CDS Sala_1769 NC_008048.1 1864963 1865910 R Sua5/YciO/YrdC/YwlC complement(1864963..1865910) Sphingopyxis alaskensis RB2256 4082081 YP_616816.1 CDS Sala_1770 NC_008048.1 1865963 1867705 D acyl-CoA dehydrogenase-like protein 1865963..1867705 Sphingopyxis alaskensis RB2256 4082082 YP_616817.1 CDS Sala_1771 NC_008048.1 1867820 1870111 D diguanylate phosphodiesterase 1867820..1870111 Sphingopyxis alaskensis RB2256 4082083 YP_616818.1 CDS Sala_1772 NC_008048.1 1870218 1870496 R hypothetical protein complement(1870218..1870496) Sphingopyxis alaskensis RB2256 4082084 YP_616819.1 CDS Sala_1773 NC_008048.1 1870880 1872910 D Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 1870880..1872910 Sphingopyxis alaskensis RB2256 4082085 YP_616820.1 CDS Sala_1774 NC_008048.1 1872979 1873419 D hypothetical protein 1872979..1873419 Sphingopyxis alaskensis RB2256 4082086 YP_616821.1 CDS nrdF NC_008048.1 1873486 1874550 D B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE; ribonucleotide-diphosphate reductase subunit beta 1873486..1874550 Sphingopyxis alaskensis RB2256 4082087 YP_616822.1 CDS Sala_1776 NC_008048.1 1874714 1874884 D hypothetical protein 1874714..1874884 Sphingopyxis alaskensis RB2256 4082088 YP_616823.1 CDS Sala_1777 NC_008048.1 1874868 1875122 D hypothetical protein 1874868..1875122 Sphingopyxis alaskensis RB2256 4082089 YP_616824.1 CDS Sala_1778 NC_008048.1 1875290 1875520 D hypothetical protein 1875290..1875520 Sphingopyxis alaskensis RB2256 4082090 YP_616825.1 CDS Sala_1780 NC_008048.1 1876468 1877418 R integrase catalytic subunit complement(1876468..1877418) Sphingopyxis alaskensis RB2256 4082092 YP_616826.1 CDS Sala_1781 NC_008048.1 1878170 1878889 D manganese and iron superoxide dismutase 1878170..1878889 Sphingopyxis alaskensis RB2256 4082093 YP_616827.1 CDS Sala_1782 NC_008048.1 1878884 1879234 R hypothetical protein complement(1878884..1879234) Sphingopyxis alaskensis RB2256 4082249 YP_616828.1 CDS Sala_1783 NC_008048.1 1879250 1882372 R acriflavin resistance protein complement(1879250..1882372) Sphingopyxis alaskensis RB2256 4082250 YP_616829.1 CDS Sala_1784 NC_008048.1 1882384 1883958 R secretion protein HlyD complement(1882384..1883958) Sphingopyxis alaskensis RB2256 4082251 YP_616830.1 CDS Sala_1785 NC_008048.1 1884124 1885338 R outer membrane efflux protein complement(1884124..1885338) Sphingopyxis alaskensis RB2256 4082252 YP_616831.1 CDS Sala_1786 NC_008048.1 1885351 1885941 D hypothetical protein 1885351..1885941 Sphingopyxis alaskensis RB2256 4082253 YP_616832.1 CDS Sala_1787 NC_008048.1 1885976 1886215 R hypothetical protein complement(1885976..1886215) Sphingopyxis alaskensis RB2256 4082254 YP_616833.1 CDS Sala_1788 NC_008048.1 1886334 1886585 D hypothetical protein 1886334..1886585 Sphingopyxis alaskensis RB2256 4082255 YP_616834.1 CDS Sala_1789 NC_008048.1 1886805 1887284 R hypothetical protein complement(1886805..1887284) Sphingopyxis alaskensis RB2256 4082257 YP_616835.1 CDS Sala_1790 NC_008048.1 1887296 1887556 R glutaredoxin GrxC complement(1887296..1887556) Sphingopyxis alaskensis RB2256 4082258 YP_616836.1 CDS Sala_1791 NC_008048.1 1888530 1889312 D type 12 methyltransferase 1888530..1889312 Sphingopyxis alaskensis RB2256 4082259 YP_616837.1 CDS Sala_1792 NC_008048.1 1889313 1889741 R NUDIX hydrolase complement(1889313..1889741) Sphingopyxis alaskensis RB2256 4082260 YP_616838.1 CDS Sala_1793 NC_008048.1 1889743 1890063 D hypothetical protein 1889743..1890063 Sphingopyxis alaskensis RB2256 4082261 YP_616839.1 CDS Sala_1794 NC_008048.1 1890124 1890288 D Flp/Fap pilin component 1890124..1890288 Sphingopyxis alaskensis RB2256 4082262 YP_616840.1 CDS Sala_1795 NC_008048.1 1890380 1891921 R peptidase M48, Ste24p complement(1890380..1891921) Sphingopyxis alaskensis RB2256 4082263 YP_616841.1 CDS Sala_1796 NC_008048.1 1892029 1892976 R catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha complement(1892029..1892976) Sphingopyxis alaskensis RB2256 4082264 YP_616842.1 CDS Sala_1797 NC_008048.1 1892986 1893897 R phage integrase complement(1892986..1893897) Sphingopyxis alaskensis RB2256 4082265 YP_616843.1 CDS Sala_1798 NC_008048.1 1893890 1895677 R hypothetical protein complement(1893890..1895677) Sphingopyxis alaskensis RB2256 4082266 YP_616844.1 CDS Sala_1799 NC_008048.1 1895819 1896394 D shikimate kinase 1895819..1896394 Sphingopyxis alaskensis RB2256 4082190 YP_616845.1 CDS aroB NC_008048.1 1896382 1897488 D catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 1896382..1897488 Sphingopyxis alaskensis RB2256 4082191 YP_616846.1 CDS Sala_1801 NC_008048.1 1897539 1898003 R hypothetical protein complement(1897539..1898003) Sphingopyxis alaskensis RB2256 4082192 YP_616847.1 CDS Sala_1802 NC_008048.1 1897996 1898346 R ArsR family transcriptional regulator complement(1897996..1898346) Sphingopyxis alaskensis RB2256 4082193 YP_616848.1 CDS Sala_1803 NC_008048.1 1898481 1900379 R sodium/hydrogen exchanger complement(1898481..1900379) Sphingopyxis alaskensis RB2256 4082194 YP_616849.1 CDS Sala_1804 NC_008048.1 1900376 1900804 R Fe-S cluster formation protein complement(1900376..1900804) Sphingopyxis alaskensis RB2256 4082195 YP_616850.1 CDS Sala_1805 NC_008048.1 1900801 1901337 R colicin V production protein complement(1900801..1901337) Sphingopyxis alaskensis RB2256 4082196 YP_616851.1 CDS Sala_1806 NC_008048.1 1901348 1902709 R Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA complement(1901348..1902709) Sphingopyxis alaskensis RB2256 4082197 YP_616852.1 CDS Sala_1807 NC_008048.1 1902928 1903578 D similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity; putative translaldolase 1902928..1903578 Sphingopyxis alaskensis RB2256 4082198 YP_616853.1 CDS Sala_1808 NC_008048.1 1903762 1904556 D enoyl-CoA hydratase/isomerase 1903762..1904556 Sphingopyxis alaskensis RB2256 4082199 YP_616854.1 CDS Sala_1809 NC_008048.1 1904676 1906172 D Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 1904676..1906172 Sphingopyxis alaskensis RB2256 4082200 YP_616855.1 CDS Sala_1810 NC_008048.1 1906291 1907814 R aldehyde dehydrogenase complement(1906291..1907814) Sphingopyxis alaskensis RB2256 4082201 YP_616856.1 CDS Sala_1811 NC_008048.1 1907951 1909915 D acetate--CoA ligase 1907951..1909915 Sphingopyxis alaskensis RB2256 4082202 YP_616857.1 CDS Sala_1812 NC_008048.1 1910025 1910756 R 20S proteasome, A and B subunits complement(1910025..1910756) Sphingopyxis alaskensis RB2256 4082203 YP_616858.1 CDS Sala_1813 NC_008048.1 1910804 1911607 R transglutaminase complement(1910804..1911607) Sphingopyxis alaskensis RB2256 4082204 YP_616859.1 CDS Sala_1814 NC_008048.1 1911610 1912551 R hypothetical protein complement(1911610..1912551) Sphingopyxis alaskensis RB2256 4082205 YP_616860.1 CDS Sala_1815 NC_008048.1 1912682 1914121 R hypothetical protein complement(1912682..1914121) Sphingopyxis alaskensis RB2256 4082206 YP_616861.1 CDS Sala_1816 NC_008048.1 1914292 1914573 D hypothetical protein 1914292..1914573 Sphingopyxis alaskensis RB2256 4082207 YP_616862.1 CDS Sala_1817 NC_008048.1 1914629 1917364 R functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA complement(1914629..1917364) Sphingopyxis alaskensis RB2256 4082208 YP_616863.1 CDS Sala_1818 NC_008048.1 1917481 1917747 R hypothetical protein complement(1917481..1917747) Sphingopyxis alaskensis RB2256 4082209 YP_616864.1 CDS Sala_1819 NC_008048.1 1918302 1918805 R hypothetical protein complement(1918302..1918805) Sphingopyxis alaskensis RB2256 4082171 YP_616865.1 CDS Sala_1820 NC_008048.1 1918915 1919718 D short chain dehydrogenase 1918915..1919718 Sphingopyxis alaskensis RB2256 4082172 YP_616866.1 CDS Sala_1821 NC_008048.1 1919906 1920553 R cytochrome c-type biogenesis protein CcmB complement(1919906..1920553) Sphingopyxis alaskensis RB2256 4082173 YP_616867.1 CDS Sala_1822 NC_008048.1 1920663 1921247 R heme exporter protein CcmA complement(1920663..1921247) Sphingopyxis alaskensis RB2256 4082174 YP_616868.1 CDS Sala_1823 NC_008048.1 1921244 1921663 R hypothetical protein complement(1921244..1921663) Sphingopyxis alaskensis RB2256 4082175 YP_616869.1 CDS Sala_1824 NC_008048.1 1921647 1921898 R hypothetical protein complement(1921647..1921898) Sphingopyxis alaskensis RB2256 4082176 YP_616870.1 CDS Sala_1825 NC_008048.1 1921903 1922271 D transcriptional coactivator/pterin dehydratase 1921903..1922271 Sphingopyxis alaskensis RB2256 4082177 YP_616871.1 CDS Sala_1826 NC_008048.1 1922279 1922623 R arsenate reductase complement(1922279..1922623) Sphingopyxis alaskensis RB2256 4082178 YP_616872.1 CDS Sala_1827 NC_008048.1 1922795 1923532 D twin-arginine translocation pathway signal 1922795..1923532 Sphingopyxis alaskensis RB2256 4082179 YP_616873.1 CDS Sala_1828 NC_008048.1 1923626 1924336 R hypothetical protein complement(1923626..1924336) Sphingopyxis alaskensis RB2256 4082180 YP_616874.1 CDS Sala_1829 NC_008048.1 1924391 1925137 R hypothetical protein complement(1924391..1925137) Sphingopyxis alaskensis RB2256 4082181 YP_616875.1 CDS Sala_1830 NC_008048.1 1925239 1925418 D hypothetical protein 1925239..1925418 Sphingopyxis alaskensis RB2256 4082182 YP_616876.1 CDS Sala_1831 NC_008048.1 1925390 1926598 D hypothetical protein 1925390..1926598 Sphingopyxis alaskensis RB2256 4082183 YP_616877.1 CDS Sala_1832 NC_008048.1 1926744 1928576 D DEAD/DEAH box helicase 1926744..1928576 Sphingopyxis alaskensis RB2256 4082184 YP_616878.1 CDS Sala_1833 NC_008048.1 1928780 1929766 D zinc-binding alcohol dehydrogenase 1928780..1929766 Sphingopyxis alaskensis RB2256 4082185 YP_616879.1 CDS Sala_1834 NC_008048.1 1929863 1930711 R carboxylesterase complement(1929863..1930711) Sphingopyxis alaskensis RB2256 4082186 YP_616880.1 CDS Sala_1835 NC_008048.1 1930708 1931211 R YbaK/prolyl-tRNA synthetase associated domain-containing protein complement(1930708..1931211) Sphingopyxis alaskensis RB2256 4082187 YP_616881.1 CDS Sala_1836 NC_008048.1 1931221 1931601 R glyoxalase/bleomycin resistance protein/dioxygenase complement(1931221..1931601) Sphingopyxis alaskensis RB2256 4082188 YP_616882.1 CDS Sala_1837 NC_008048.1 1931717 1932589 R formyltetrahydrofolate deformylase complement(1931717..1932589) Sphingopyxis alaskensis RB2256 4082189 YP_616883.1 CDS Sala_1838 NC_008048.1 1932591 1932977 R glyoxalase/bleomycin resistance protein/dioxygenase complement(1932591..1932977) Sphingopyxis alaskensis RB2256 4082016 YP_616884.1 CDS Sala_1839 NC_008048.1 1932992 1934104 R zinc-binding alcohol dehydrogenase complement(1932992..1934104) Sphingopyxis alaskensis RB2256 4082017 YP_616885.1 CDS Sala_1840 NC_008048.1 1934202 1934720 R N-acetyltransferase GCN5 complement(1934202..1934720) Sphingopyxis alaskensis RB2256 4082018 YP_616886.1 CDS Sala_1841 NC_008048.1 1934968 1935360 R hypothetical protein complement(1934968..1935360) Sphingopyxis alaskensis RB2256 4082019 YP_616887.1 CDS Sala_1842 NC_008048.1 1935505 1936755 R catalyzes the formation of 2-oxobutanoate from L-threonine; threonine dehydratase complement(1935505..1936755) Sphingopyxis alaskensis RB2256 4082020 YP_616888.1 CDS Sala_1843 NC_008048.1 1937250 1938128 D 6-phosphogluconate dehydrogenase 1937250..1938128 Sphingopyxis alaskensis RB2256 4082021 YP_616889.1 CDS Sala_1844 NC_008048.1 1938125 1939789 D amidohydrolase 3 1938125..1939789 Sphingopyxis alaskensis RB2256 4082022 YP_616890.1 CDS Sala_1845 NC_008048.1 1939779 1941047 D FAD dependent oxidoreductase 1939779..1941047 Sphingopyxis alaskensis RB2256 4082023 YP_616891.1 CDS Sala_1846 NC_008048.1 1941166 1942314 D (S)-2-hydroxy-acid oxidase 1941166..1942314 Sphingopyxis alaskensis RB2256 4082024 YP_616892.1 CDS Sala_1847 NC_008048.1 1942511 1943266 R hypothetical protein complement(1942511..1943266) Sphingopyxis alaskensis RB2256 4082025 YP_616893.1 CDS ispG NC_008048.1 1943525 1944676 D catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1943525..1944676 Sphingopyxis alaskensis RB2256 4082026 YP_616894.1 CDS Sala_1849 NC_008048.1 1944983 1945906 D hypothetical protein 1944983..1945906 Sphingopyxis alaskensis RB2256 4082027 YP_616895.1 CDS Sala_1850 NC_008048.1 1945938 1946420 D N-acetyltransferase GCN5 1945938..1946420 Sphingopyxis alaskensis RB2256 4082028 YP_616896.1 CDS Sala_1851 NC_008048.1 1946570 1947037 D hypothetical protein 1946570..1947037 Sphingopyxis alaskensis RB2256 4082029 YP_616897.1 CDS Sala_1852 NC_008048.1 1947083 1947280 R hypothetical protein complement(1947083..1947280) Sphingopyxis alaskensis RB2256 4082030 YP_616898.1 CDS Sala_1853 NC_008048.1 1947293 1948447 R hypothetical protein complement(1947293..1948447) Sphingopyxis alaskensis RB2256 4082031 YP_616899.1 CDS Sala_1854 NC_008048.1 1948609 1950126 R propionyl-CoA carboxylase complement(1948609..1950126) Sphingopyxis alaskensis RB2256 4082032 YP_616900.1 CDS Sala_1855 NC_008048.1 1950195 1950974 D short-chain dehydrogenase/reductase SDR 1950195..1950974 Sphingopyxis alaskensis RB2256 4082033 YP_616901.1 CDS Sala_1856 NC_008048.1 1951124 1952023 D hypothetical protein 1951124..1952023 Sphingopyxis alaskensis RB2256 4082034 YP_616902.1 CDS Sala_1857 NC_008048.1 1952204 1952476 R flavoprotein complement(1952204..1952476) Sphingopyxis alaskensis RB2256 4082035 YP_616903.1 CDS Sala_1858 NC_008048.1 1952645 1953151 R MarR family transcriptional regulator complement(1952645..1953151) Sphingopyxis alaskensis RB2256 4080172 YP_616904.1 CDS Sala_1859 NC_008048.1 1953318 1954613 R acyl-CoA dehydrogenase-like protein complement(1953318..1954613) Sphingopyxis alaskensis RB2256 4080173 YP_616905.1 CDS Sala_1860 NC_008048.1 1954632 1955975 R aminoglycoside phosphotransferase complement(1954632..1955975) Sphingopyxis alaskensis RB2256 4080174 YP_616906.1 CDS Sala_1861 NC_008048.1 1956144 1957037 R hypothetical protein complement(1956144..1957037) Sphingopyxis alaskensis RB2256 4080175 YP_616907.1 CDS Sala_1862 NC_008048.1 1957385 1958386 D hypothetical protein 1957385..1958386 Sphingopyxis alaskensis RB2256 4080177 YP_616908.1 CDS Sala_1863 NC_008048.1 1958383 1959003 D glutathione S-transferase-like protein 1958383..1959003 Sphingopyxis alaskensis RB2256 4080178 YP_616909.1 CDS Sala_1864 NC_008048.1 1959250 1959498 R hypothetical protein complement(1959250..1959498) Sphingopyxis alaskensis RB2256 4080179 YP_616910.1 CDS Sala_1865 NC_008048.1 1959625 1961184 R activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase complement(1959625..1961184) Sphingopyxis alaskensis RB2256 4080180 YP_616911.1 CDS Sala_1866 NC_008048.1 1961285 1962391 R hypothetical protein complement(1961285..1962391) Sphingopyxis alaskensis RB2256 4080181 YP_616912.1 CDS Sala_1867 NC_008048.1 1962469 1964022 R acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein; glycine dehydrogenase subunit 2 complement(1962469..1964022) Sphingopyxis alaskensis RB2256 4080182 YP_616913.1 CDS Sala_1868 NC_008048.1 1964019 1965377 R acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 2 to form the P protein; glycine dehydrogenase subunit 1 complement(1964019..1965377) Sphingopyxis alaskensis RB2256 4080183 YP_616914.1 CDS Sala_1869 NC_008048.1 1965381 1966205 R hypothetical protein complement(1965381..1966205) Sphingopyxis alaskensis RB2256 4080184 YP_616915.1 CDS Sala_1870 NC_008048.1 1966243 1966614 R part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H complement(1966243..1966614) Sphingopyxis alaskensis RB2256 4080185 YP_616916.1 CDS gcvT NC_008048.1 1966618 1967742 R catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T complement(1966618..1967742) Sphingopyxis alaskensis RB2256 4080186 YP_616917.1 CDS Sala_1872 NC_008048.1 1968062 1968709 R NAD-dependent epimerase/dehydratase complement(1968062..1968709) Sphingopyxis alaskensis RB2256 4082617 YP_616918.1 CDS Sala_1873 NC_008048.1 1968702 1969874 R deoxyguanosinetriphosphate triphosphohydrolase complement(1968702..1969874) Sphingopyxis alaskensis RB2256 4082618 YP_616919.1 CDS Sala_1874 NC_008048.1 1969871 1971496 R sporulation related protein complement(1969871..1971496) Sphingopyxis alaskensis RB2256 4082619 YP_616920.1 CDS Sala_1875 NC_008048.1 1971556 1973004 R GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ complement(1971556..1973004) Sphingopyxis alaskensis RB2256 4082620 YP_616921.1 CDS Sala_1876 NC_008048.1 1973157 1974413 R cell division protein FtsA complement(1973157..1974413) Sphingopyxis alaskensis RB2256 4082621 YP_616922.1 CDS Sala_1877 NC_008048.1 1974417 1975355 R cell division protein FtsQ complement(1974417..1975355) Sphingopyxis alaskensis RB2256 4082622 YP_616923.1 CDS ddl NC_008048.1 1975366 1976292 R D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase complement(1975366..1976292) Sphingopyxis alaskensis RB2256 4082623 YP_616924.1 CDS murB NC_008048.1 1976289 1977188 R catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase complement(1976289..1977188) Sphingopyxis alaskensis RB2256 4082624 YP_616925.1 CDS murC NC_008048.1 1977319 1978752 R Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase complement(1977319..1978752) Sphingopyxis alaskensis RB2256 4082625 YP_616926.1 CDS murG NC_008048.1 1978752 1979930 R UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase complement(1978752..1979930) Sphingopyxis alaskensis RB2256 4082626 YP_616927.1 CDS Sala_1882 NC_008048.1 1979941 1981173 R cell cycle protein complement(1979941..1981173) Sphingopyxis alaskensis RB2256 4082627 YP_616928.1 CDS Sala_1883 NC_008048.1 1981307 1982611 R UDP-N-acetylmuramoylalanine--D-glutamate ligase complement(1981307..1982611) Sphingopyxis alaskensis RB2256 4082628 YP_616929.1 CDS mraY NC_008048.1 1982608 1983678 R First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase complement(1982608..1983678) Sphingopyxis alaskensis RB2256 4082629 YP_616930.1 CDS Sala_1885 NC_008048.1 1983678 1985057 R UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase complement(1983678..1985057) Sphingopyxis alaskensis RB2256 4082630 YP_616931.1 CDS murE NC_008048.1 1985054 1986493 R involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase complement(1985054..1986493) Sphingopyxis alaskensis RB2256 4082631 YP_616932.1 CDS Sala_1887 NC_008048.1 1986493 1988181 R peptidoglycan glycosyltransferase complement(1986493..1988181) Sphingopyxis alaskensis RB2256 4082632 YP_616933.1 CDS Sala_1888 NC_008048.1 1988178 1988771 R hypothetical protein complement(1988178..1988771) Sphingopyxis alaskensis RB2256 4082633 YP_616934.1 CDS mraW NC_008048.1 1988771 1989748 R S-adenosyl-methyltransferase MraW complement(1988771..1989748) Sphingopyxis alaskensis RB2256 4082634 YP_616935.1 CDS Sala_1890 NC_008048.1 1989745 1990245 R hypothetical protein complement(1989745..1990245) Sphingopyxis alaskensis RB2256 4082635 YP_616936.1 CDS Sala_1891 NC_008048.1 1990521 1991672 R hypothetical protein complement(1990521..1991672) Sphingopyxis alaskensis RB2256 4082597 YP_616937.1 CDS Sala_1892 NC_008048.1 1991681 1992082 R hypothetical protein complement(1991681..1992082) Sphingopyxis alaskensis RB2256 4082598 YP_616938.1 CDS Sala_1893 NC_008048.1 1992079 1993059 R CysK; forms a complex with serine acetyltransferase CysE; functions in cysteine biosynthesis; cysteine synthase A complement(1992079..1993059) Sphingopyxis alaskensis RB2256 4082599 YP_616939.1 CDS Sala_1894 NC_008048.1 1993256 1995385 D TonB-dependent receptor 1993256..1995385 Sphingopyxis alaskensis RB2256 4082600 YP_616940.1 CDS Sala_1895 NC_008048.1 1995430 1995969 R hypothetical protein complement(1995430..1995969) Sphingopyxis alaskensis RB2256 4082601 YP_616941.1 CDS Sala_1896 NC_008048.1 1996000 1996743 R 3-oxoacyl-(acyl-carrier-protein) reductase complement(1996000..1996743) Sphingopyxis alaskensis RB2256 4082602 YP_616942.1 CDS Sala_1897 NC_008048.1 1996768 1997706 R malonyl CoA-acyl carrier protein transacylase complement(1996768..1997706) Sphingopyxis alaskensis RB2256 4082603 YP_616943.1 CDS Sala_1898 NC_008048.1 1997835 1998662 R peptidase U61, LD-carboxypeptidase A complement(1997835..1998662) Sphingopyxis alaskensis RB2256 4082604 YP_616944.1 CDS Sala_1899 NC_008048.1 1998874 2000262 D Mur ligase, middle region 1998874..2000262 Sphingopyxis alaskensis RB2256 4082605 YP_616945.1 CDS rpsF NC_008048.1 2000423 2000791 D binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 2000423..2000791 Sphingopyxis alaskensis RB2256 4082606 YP_616946.1 CDS rpsR NC_008048.1 2000803 2001027 D binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 2000803..2001027 Sphingopyxis alaskensis RB2256 4082607 YP_616947.1 CDS rplI NC_008048.1 2001041 2001673 D in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 2001041..2001673 Sphingopyxis alaskensis RB2256 4082608 YP_616948.1 CDS Sala_1903 NC_008048.1 2001751 2002629 R LysR family transcriptional regulator complement(2001751..2002629) Sphingopyxis alaskensis RB2256 4082609 YP_616949.1 CDS Sala_1904 NC_008048.1 2002725 2003594 D beta-lactamase-like protein 2002725..2003594 Sphingopyxis alaskensis RB2256 4082610 YP_616950.1 CDS Sala_1905 NC_008048.1 2003634 2004824 R sporulation related protein complement(2003634..2004824) Sphingopyxis alaskensis RB2256 4082611 YP_616951.1 CDS Sala_1906 NC_008048.1 2005083 2005805 D plasmid partitioning-family protein 2005083..2005805 Sphingopyxis alaskensis RB2256 4082612 YP_616952.1 CDS Sala_1907 NC_008048.1 2005823 2006485 D hypothetical protein 2005823..2006485 Sphingopyxis alaskensis RB2256 4082613 YP_616953.1 CDS Sala_1908 NC_008048.1 2006508 2007911 D sporulation related protein 2006508..2007911 Sphingopyxis alaskensis RB2256 4082614 YP_616954.1 CDS Sala_1909 NC_008048.1 2008069 2009106 D hypothetical protein 2008069..2009106 Sphingopyxis alaskensis RB2256 4082615 YP_616955.1 CDS Sala_1910 NC_008048.1 2009118 2009774 D putative hydroxylase 2009118..2009774 Sphingopyxis alaskensis RB2256 4082616 YP_616956.1 CDS Sala_1911 NC_008048.1 2009778 2010380 R GTP cyclohydrolase I complement(2009778..2010380) Sphingopyxis alaskensis RB2256 4082767 YP_616957.1 CDS Sala_1912 NC_008048.1 2010815 2013724 D TonB-dependent receptor 2010815..2013724 Sphingopyxis alaskensis RB2256 4082768 YP_616958.1 CDS Sala_1913 NC_008048.1 2013866 2016454 R TonB-dependent receptor complement(2013866..2016454) Sphingopyxis alaskensis RB2256 4082769 YP_616959.1 CDS Sala_1914 NC_008048.1 2017011 2018003 R ribonuclease complement(2017011..2018003) Sphingopyxis alaskensis RB2256 4082771 YP_616960.1 CDS Sala_1915 NC_008048.1 2017996 2018568 R maf protein complement(2017996..2018568) Sphingopyxis alaskensis RB2256 4082772 YP_616961.1 CDS infA NC_008048.1 2018583 2018801 R stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 complement(2018583..2018801) Sphingopyxis alaskensis RB2256 4082773 YP_616962.1 CDS Sala_1917 NC_008048.1 2018874 2019749 R transcription factor jumonji, JmjC complement(2018874..2019749) Sphingopyxis alaskensis RB2256 4082774 YP_616963.1 CDS Sala_1918 NC_008048.1 2019746 2020930 R hypothetical protein complement(2019746..2020930) Sphingopyxis alaskensis RB2256 4082775 YP_616964.1 CDS Sala_1919 NC_008048.1 2021312 2023207 R asparagine synthase complement(2021312..2023207) Sphingopyxis alaskensis RB2256 4082776 YP_616965.1 CDS Sala_1920 NC_008048.1 2023217 2024695 R ABC transporter complement(2023217..2024695) Sphingopyxis alaskensis RB2256 4082777 YP_616966.1 CDS Sala_1921 NC_008048.1 2024692 2025897 R group 1 glycosyl transferase complement(2024692..2025897) Sphingopyxis alaskensis RB2256 4082778 YP_616967.1 CDS Sala_1922 NC_008048.1 2026032 2027099 R hypothetical protein complement(2026032..2027099) Sphingopyxis alaskensis RB2256 4082779 YP_616968.1 CDS Sala_1923 NC_008048.1 2027096 2027956 R polysaccharide deacetylase complement(2027096..2027956) Sphingopyxis alaskensis RB2256 4082780 YP_616969.1 CDS Sala_1924 NC_008048.1 2028002 2029246 R hypothetical protein complement(2028002..2029246) Sphingopyxis alaskensis RB2256 4082781 YP_616970.1 CDS Sala_1925 NC_008048.1 2029269 2030975 R hypothetical protein complement(2029269..2030975) Sphingopyxis alaskensis RB2256 4082782 YP_616971.1 CDS Sala_1926 NC_008048.1 2030975 2031967 R protein-tyrosine kinase complement(2030975..2031967) Sphingopyxis alaskensis RB2256 4082783 YP_616972.1 CDS Sala_1927 NC_008048.1 2031982 2033511 R lipopolysaccharide biosynthesis protein complement(2031982..2033511) Sphingopyxis alaskensis RB2256 4082784 YP_616973.1 CDS Sala_1928 NC_008048.1 2033560 2034216 R polysaccharide export protein complement(2033560..2034216) Sphingopyxis alaskensis RB2256 4082877 YP_616974.1 CDS Sala_1929 NC_008048.1 2034388 2035617 R Orn/DAP/Arg decarboxylase 2 complement(2034388..2035617) Sphingopyxis alaskensis RB2256 4082878 YP_616975.1 CDS Sala_1930 NC_008048.1 2035614 2037146 R AMP-dependent synthetase and ligase complement(2035614..2037146) Sphingopyxis alaskensis RB2256 4082879 YP_616976.1 CDS Sala_1931 NC_008048.1 2037182 2038171 D hypothetical protein 2037182..2038171 Sphingopyxis alaskensis RB2256 4082880 YP_616977.1 CDS Sala_1932 NC_008048.1 2038168 2038446 D hypothetical protein 2038168..2038446 Sphingopyxis alaskensis RB2256 4082881 YP_616978.1 CDS Sala_1933 NC_008048.1 2038541 2039233 D hypothetical protein 2038541..2039233 Sphingopyxis alaskensis RB2256 4082882 YP_616979.1 CDS Sala_1934 NC_008048.1 2039218 2040012 D alpha/beta hydrolase 2039218..2040012 Sphingopyxis alaskensis RB2256 4082883 YP_616980.1 CDS Sala_1935 NC_008048.1 2040111 2042204 R catalyzes the formation of malate from glyoxylate and acetyl-CoA; malate synthase G complement(2040111..2042204) Sphingopyxis alaskensis RB2256 4082884 YP_616981.1 CDS Sala_1936 NC_008048.1 2042340 2042672 D hypothetical protein 2042340..2042672 Sphingopyxis alaskensis RB2256 4082885 YP_616982.1 CDS Sala_1937 NC_008048.1 2042684 2042941 D hypothetical protein 2042684..2042941 Sphingopyxis alaskensis RB2256 4082886 YP_616983.1 CDS Sala_1938 NC_008048.1 2042976 2044151 R diguanylate cyclase complement(2042976..2044151) Sphingopyxis alaskensis RB2256 4082887 YP_616984.1 CDS Sala_1939 NC_008048.1 2044332 2045540 D hypothetical protein 2044332..2045540 Sphingopyxis alaskensis RB2256 4082888 YP_616985.1 CDS Sala_1940 NC_008048.1 2045546 2046538 D arginine N-succinyltransferase 2045546..2046538 Sphingopyxis alaskensis RB2256 4082889 YP_616986.1 CDS Sala_1941 NC_008048.1 2046540 2047787 D catalyzes the hydrolysis of 2-N-succinylarginine into 2-N-succinylornithine, ammonia and carbon dioxide in arginine degradation; succinylarginine dihydrolase 2046540..2047787 Sphingopyxis alaskensis RB2256 4082890 YP_616987.1 CDS Sala_1942 NC_008048.1 2047794 2048465 D hypothetical protein 2047794..2048465 Sphingopyxis alaskensis RB2256 4082891 YP_616988.1 CDS Sala_1943 NC_008048.1 2048670 2048915 D hypothetical protein 2048670..2048915 Sphingopyxis alaskensis RB2256 4082892 YP_616989.1 CDS Sala_1944 NC_008048.1 2048964 2049713 D alpha/beta hydrolase 2048964..2049713 Sphingopyxis alaskensis RB2256 4082893 YP_616990.1 CDS Sala_1945 NC_008048.1 2049670 2050710 R alpha/beta hydrolase complement(2049670..2050710) Sphingopyxis alaskensis RB2256 4082894 YP_616991.1 CDS Sala_1946 NC_008048.1 2050771 2052396 R major facilitator superfamily transporter complement(2050771..2052396) Sphingopyxis alaskensis RB2256 4082895 YP_616992.1 CDS Sala_1947 NC_008048.1 2052468 2053847 R DEAD/DEAH box helicase complement(2052468..2053847) Sphingopyxis alaskensis RB2256 4082896 YP_616993.1 CDS Sala_1948 NC_008048.1 2054275 2055747 D carbohydrate kinase 2054275..2055747 Sphingopyxis alaskensis RB2256 4080497 YP_616994.1 CDS rpmE NC_008048.1 2055789 2056016 R RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 complement(2055789..2056016) Sphingopyxis alaskensis RB2256 4080498 YP_616995.1 CDS Sala_1950 NC_008048.1 2056184 2056645 R beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ complement(2056184..2056645) Sphingopyxis alaskensis RB2256 4080499 YP_616996.1 CDS Sala_1951 NC_008048.1 2056672 2057358 R outer membrane chaperone Skp complement(2056672..2057358) Sphingopyxis alaskensis RB2256 4080500 YP_616997.1 CDS Sala_1952 NC_008048.1 2057358 2060021 R surface antigen (D15) complement(2057358..2060021) Sphingopyxis alaskensis RB2256 4080501 YP_616998.1 CDS Sala_1953 NC_008048.1 2060102 2061187 R peptidase M50 membrane-associated zinc metallopeptidase complement(2060102..2061187) Sphingopyxis alaskensis RB2256 4080502 YP_616999.1 CDS Sala_1954 NC_008048.1 2061228 2062391 R catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase complement(2061228..2062391) Sphingopyxis alaskensis RB2256 4080503 YP_617000.1 CDS Sala_1955 NC_008048.1 2062393 2063058 R phosphatidate cytidylyltransferase complement(2062393..2063058) Sphingopyxis alaskensis RB2256 4080504 YP_617001.1 CDS Sala_1956 NC_008048.1 2063061 2063747 R undecaprenyl diphosphate synthase complement(2063061..2063747) Sphingopyxis alaskensis RB2256 4080505 YP_617002.1 CDS frr NC_008048.1 2063871 2064425 R Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor complement(2063871..2064425) Sphingopyxis alaskensis RB2256 4080506 YP_617003.1 CDS pyrH NC_008048.1 2064568 2065293 R Catalyzes the phosphorylation of UMP to UDP; uridylate kinase complement(2064568..2065293) Sphingopyxis alaskensis RB2256 4080507 YP_617004.1 CDS tsf NC_008048.1 2065409 2066335 R EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts complement(2065409..2066335) Sphingopyxis alaskensis RB2256 4080508 YP_617005.1 CDS rpsB NC_008048.1 2066467 2067300 R one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 complement(2066467..2067300) Sphingopyxis alaskensis RB2256 4080509 YP_617006.1 CDS Sala_1961 NC_008048.1 2067614 2067877 D hypothetical protein 2067614..2067877 Sphingopyxis alaskensis RB2256 4080510 YP_617007.1 CDS Sala_1962 NC_008048.1 2067861 2068643 R CDP-alcohol phosphatidyltransferase complement(2067861..2068643) Sphingopyxis alaskensis RB2256 4080511 YP_617008.1 CDS Sala_1963 NC_008048.1 2068645 2069433 R catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase complement(2068645..2069433) Sphingopyxis alaskensis RB2256 4080512 YP_617009.1 CDS Sala_1964 NC_008048.1 2069542 2070756 D Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase 2069542..2070756 Sphingopyxis alaskensis RB2256 4080513 YP_617010.1 CDS Sala_1965 NC_008048.1 2071104 2072888 D sodium/hydrogen exchanger 2071104..2072888 Sphingopyxis alaskensis RB2256 4080514 YP_617011.1 CDS Sala_1966 NC_008048.1 2072900 2075836 R peptidase M16-like protein complement(2072900..2075836) Sphingopyxis alaskensis RB2256 4080515 YP_617012.1 CDS Sala_1967 NC_008048.1 2075920 2076780 D nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 2075920..2076780 Sphingopyxis alaskensis RB2256 4081011 YP_617013.1 CDS Sala_1968 NC_008048.1 2076787 2077656 D hypothetical protein 2076787..2077656 Sphingopyxis alaskensis RB2256 4081012 YP_617014.1 CDS Sala_1969 NC_008048.1 2077550 2078377 R NUDIX hydrolase complement(2077550..2078377) Sphingopyxis alaskensis RB2256 4081013 YP_617015.1 CDS Sala_1970 NC_008048.1 2078459 2079094 D putative transmembrane protein 2078459..2079094 Sphingopyxis alaskensis RB2256 4081014 YP_617016.1 CDS Sala_1971 NC_008048.1 2079098 2080321 R FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(2079098..2080321) Sphingopyxis alaskensis RB2256 4081015 YP_617017.1 CDS Sala_1972 NC_008048.1 2080429 2080683 R hypothetical protein complement(2080429..2080683) Sphingopyxis alaskensis RB2256 4081016 YP_617018.1 CDS Sala_1973 NC_008048.1 2080695 2081747 R Glu/Leu/Phe/Val dehydrogenase complement(2080695..2081747) Sphingopyxis alaskensis RB2256 4081017 YP_617019.1 CDS Sala_1974 NC_008048.1 2081872 2082342 D AsnC family transcriptional regulator 2081872..2082342 Sphingopyxis alaskensis RB2256 4081018 YP_617020.1 CDS Sala_1976 NC_008048.1 2083542 2084531 R mandelate racemase/muconate lactonizing protein complement(2083542..2084531) Sphingopyxis alaskensis RB2256 4081020 YP_617021.1 CDS Sala_1977 NC_008048.1 2084556 2084951 D hypothetical protein 2084556..2084951 Sphingopyxis alaskensis RB2256 4081021 YP_617022.1 CDS Sala_1978 NC_008048.1 2085053 2087212 D prolyl oligopeptidase 2085053..2087212 Sphingopyxis alaskensis RB2256 4081022 YP_617023.1 CDS Sala_1979 NC_008048.1 2087214 2087699 D putative GAF sensor protein 2087214..2087699 Sphingopyxis alaskensis RB2256 4081023 YP_617024.1 CDS Sala_1980 NC_008048.1 2088086 2088877 D 17 kDa surface antigen 2088086..2088877 Sphingopyxis alaskensis RB2256 4081024 YP_617025.1 CDS Sala_1981 NC_008048.1 2089089 2089619 D hypothetical protein 2089089..2089619 Sphingopyxis alaskensis RB2256 4081025 YP_617026.1 CDS Sala_1982 NC_008048.1 2089932 2091629 D gamma-glutamyltransferase 2089932..2091629 Sphingopyxis alaskensis RB2256 4081026 YP_617027.1 CDS Sala_1983 NC_008048.1 2091798 2092232 D type IV pilus assembly PilZ 2091798..2092232 Sphingopyxis alaskensis RB2256 4081027 YP_617028.1 CDS Sala_1984 NC_008048.1 2092258 2093478 R polyhydroxyalkanoate depolymerase complement(2092258..2093478) Sphingopyxis alaskensis RB2256 4081028 YP_617029.1 CDS Sala_1985 NC_008048.1 2093653 2095446 D ABC transporter 2093653..2095446 Sphingopyxis alaskensis RB2256 4081029 YP_617030.1 CDS Sala_1986 NC_008048.1 2095486 2096022 D hypothetical protein 2095486..2096022 Sphingopyxis alaskensis RB2256 4081030 YP_617031.1 CDS Sala_1987 NC_008048.1 2096030 2096455 R biopolymer transport protein ExbD/TolR complement(2096030..2096455) Sphingopyxis alaskensis RB2256 4082152 YP_617032.1 CDS Sala_1988 NC_008048.1 2096682 2097803 R OmpA/MotB protein complement(2096682..2097803) Sphingopyxis alaskensis RB2256 4082153 YP_617033.1 CDS Sala_1989 NC_008048.1 2097934 2098386 R hypothetical protein complement(2097934..2098386) Sphingopyxis alaskensis RB2256 4082154 YP_617034.1 CDS Sala_1990 NC_008048.1 2098396 2100624 R hypothetical protein complement(2098396..2100624) Sphingopyxis alaskensis RB2256 4082155 YP_617035.1 CDS Sala_1991 NC_008048.1 2100978 2101811 R phage protein complement(2100978..2101811) Sphingopyxis alaskensis RB2256 4082156 YP_617036.1 CDS Sala_1992 NC_008048.1 2101805 2104129 R hypothetical protein complement(2101805..2104129) Sphingopyxis alaskensis RB2256 4082157 YP_617037.1 CDS Sala_1993 NC_008048.1 2104129 2104704 R hypothetical protein complement(2104129..2104704) Sphingopyxis alaskensis RB2256 4082158 YP_617038.1 CDS Sala_1994 NC_008048.1 2104902 2105228 R hypothetical protein complement(2104902..2105228) Sphingopyxis alaskensis RB2256 4082159 YP_617039.1 CDS Sala_1995 NC_008048.1 2105225 2105632 R Phage major tail protein, TP901-1 complement(2105225..2105632) Sphingopyxis alaskensis RB2256 4082160 YP_617040.1 CDS Sala_1996 NC_008048.1 2105680 2106015 D hypothetical protein 2105680..2106015 Sphingopyxis alaskensis RB2256 4082161 YP_617041.1 CDS Sala_1997 NC_008048.1 2106104 2107048 D hypothetical protein 2106104..2107048 Sphingopyxis alaskensis RB2256 4082162 YP_617042.1 CDS Sala_1998 NC_008048.1 2107424 2108917 R hypothetical protein complement(2107424..2108917) Sphingopyxis alaskensis RB2256 4082163 YP_617043.1 CDS Sala_1999 NC_008048.1 2109026 2110168 R phage major capsid protein, HK97 complement(2109026..2110168) Sphingopyxis alaskensis RB2256 4082164 YP_617044.1 CDS Sala_2000 NC_008048.1 2110339 2110788 R peptidase U35, phage prohead HK97 complement(2110339..2110788) Sphingopyxis alaskensis RB2256 4082165 YP_617045.1 CDS Sala_2001 NC_008048.1 2110785 2111117 R hypothetical protein complement(2110785..2111117) Sphingopyxis alaskensis RB2256 4082166 YP_617046.1 CDS Sala_2002 NC_008048.1 2111214 2112320 R Phage portal protein, HK97 complement(2111214..2112320) Sphingopyxis alaskensis RB2256 4082167 YP_617047.1 CDS Sala_2003 NC_008048.1 2112334 2112975 R hypothetical protein complement(2112334..2112975) Sphingopyxis alaskensis RB2256 4082168 YP_617048.1 CDS Sala_2004 NC_008048.1 2113125 2114435 R hypothetical protein complement(2113125..2114435) Sphingopyxis alaskensis RB2256 4082169 YP_617049.1 CDS Sala_2005 NC_008048.1 2114432 2114932 R hypothetical protein complement(2114432..2114932) Sphingopyxis alaskensis RB2256 4082170 YP_617050.1 CDS Sala_2006 NC_008048.1 2115059 2116153 R proline iminopeptidase complement(2115059..2116153) Sphingopyxis alaskensis RB2256 4079943 YP_617051.1 CDS Sala_2007 NC_008048.1 2116639 2118801 D peptidase S9, prolyl oligopeptidase active site region 2116639..2118801 Sphingopyxis alaskensis RB2256 4079944 YP_617052.1 CDS Sala_2008 NC_008048.1 2118812 2119387 D phosphoribosyltransferase 2118812..2119387 Sphingopyxis alaskensis RB2256 4079945 YP_617053.1 CDS Sala_2009 NC_008048.1 2119380 2120405 D catalyzes the formation of inosine from adenosine; adenosine deaminase 2119380..2120405 Sphingopyxis alaskensis RB2256 4079946 YP_617054.1 CDS Sala_2010 NC_008048.1 2120494 2121534 R rod shape-determining protein MreB complement(2120494..2121534) Sphingopyxis alaskensis RB2256 4079947 YP_617055.1 CDS Sala_2011 NC_008048.1 2121705 2122280 R hypothetical protein complement(2121705..2122280) Sphingopyxis alaskensis RB2256 4079948 YP_617056.1 CDS Sala_2012 NC_008048.1 2122337 2123026 R hypothetical protein complement(2122337..2123026) Sphingopyxis alaskensis RB2256 4079949 YP_617057.1 CDS Sala_2013 NC_008048.1 2123181 2124179 R catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase complement(2123181..2124179) Sphingopyxis alaskensis RB2256 4079950 YP_617058.1 CDS Sala_2014 NC_008048.1 2124201 2125778 R integral membrane protein MviN complement(2124201..2125778) Sphingopyxis alaskensis RB2256 4079951 YP_617059.1 CDS Sala_2015 NC_008048.1 2125806 2126324 R protein-export protein SecB complement(2125806..2126324) Sphingopyxis alaskensis RB2256 4079952 YP_617060.1 CDS Sala_2016 NC_008048.1 2126574 2127239 D import inner membrane translocase subunit Tim44 2126574..2127239 Sphingopyxis alaskensis RB2256 4079953 YP_617061.1 CDS Sala_2017 NC_008048.1 2127244 2128566 D MltA protein 2127244..2128566 Sphingopyxis alaskensis RB2256 4079954 YP_617062.1 CDS Sala_2018 NC_008048.1 2128631 2129152 D Smr protein/MutS2 2128631..2129152 Sphingopyxis alaskensis RB2256 4079955 YP_617063.1 CDS Sala_2019 NC_008048.1 2129149 2130282 R dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase complement(2129149..2130282) Sphingopyxis alaskensis RB2256 4079956 YP_617064.1 CDS Sala_2020 NC_008048.1 2130379 2130846 D cupin 2130379..2130846 Sphingopyxis alaskensis RB2256 4079957 YP_617065.1 CDS Sala_2021 NC_008048.1 2131015 2132301 R cytochrome P450 complement(2131015..2132301) Sphingopyxis alaskensis RB2256 4079958 YP_617066.1 CDS Sala_2022 NC_008048.1 2132342 2134015 R hypothetical protein complement(2132342..2134015) Sphingopyxis alaskensis RB2256 4079959 YP_617067.1 CDS hppA NC_008048.1 2134080 2136194 R pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient; membrane-bound proton-translocating pyrophosphatase complement(2134080..2136194) Sphingopyxis alaskensis RB2256 4079960 YP_617068.1 CDS Sala_2024 NC_008048.1 2136430 2137383 R thiamine-monophosphate kinase complement(2136430..2137383) Sphingopyxis alaskensis RB2256 4079961 YP_617069.1 CDS Sala_2025 NC_008048.1 2137543 2137992 R NusB antitermination factor complement(2137543..2137992) Sphingopyxis alaskensis RB2256 4079962 YP_617070.1 CDS hisD NC_008048.1 2138000 2139292 R catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase complement(2138000..2139292) Sphingopyxis alaskensis RB2256 4079924 YP_617071.1 CDS hisG NC_008048.1 2139279 2139950 R short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ; ATP phosphoribosyltransferase catalytic subunit complement(2139279..2139950) Sphingopyxis alaskensis RB2256 4079925 YP_617072.1 CDS Sala_2028 NC_008048.1 2139974 2141053 D hypothetical protein 2139974..2141053 Sphingopyxis alaskensis RB2256 4079926 YP_617073.1 CDS Sala_2029 NC_008048.1 2141120 2141542 R hypothetical protein complement(2141120..2141542) Sphingopyxis alaskensis RB2256 4079927 YP_617074.1 CDS mnmA NC_008048.1 2141597 2142745 R catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA complement(2141597..2142745) Sphingopyxis alaskensis RB2256 4079928 YP_617075.1 CDS Sala_2031 NC_008048.1 2142851 2143090 R hypothetical protein complement(2142851..2143090) Sphingopyxis alaskensis RB2256 4079929 YP_617076.1 CDS Sala_2032 NC_008048.1 2143255 2143560 D hypothetical protein 2143255..2143560 Sphingopyxis alaskensis RB2256 4079930 YP_617077.1 CDS Sala_2033 NC_008048.1 2143745 2144020 D hypothetical protein 2143745..2144020 Sphingopyxis alaskensis RB2256 4079931 YP_617078.1 CDS Sala_2034 NC_008048.1 2144064 2144444 R hypothetical protein complement(2144064..2144444) Sphingopyxis alaskensis RB2256 4079932 YP_617079.1 CDS Sala_2035 NC_008048.1 2144457 2145104 R hypothetical protein complement(2144457..2145104) Sphingopyxis alaskensis RB2256 4079933 YP_617080.1 CDS Sala_2036 NC_008048.1 2145174 2146997 R binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA complement(2145174..2146997) Sphingopyxis alaskensis RB2256 4079934 YP_617081.1 CDS Sala_2039 NC_008048.1 2150698 2151111 R hypothetical protein complement(2150698..2151111) Sphingopyxis alaskensis RB2256 4079936 YP_617082.1 CDS Sala_2040 NC_008048.1 2151237 2151746 R hypothetical protein complement(2151237..2151746) Sphingopyxis alaskensis RB2256 4079937 YP_617083.1 CDS rplU NC_008048.1 2151975 2152469 D 50S ribosomal protein L21 2151975..2152469 Sphingopyxis alaskensis RB2256 4079938 YP_617084.1 CDS rpmA NC_008048.1 2152519 2152788 D involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 2152519..2152788 Sphingopyxis alaskensis RB2256 4079939 YP_617085.1 CDS Sala_2043 NC_008048.1 2153031 2153627 D N-acetyltransferase GCN5 2153031..2153627 Sphingopyxis alaskensis RB2256 4079940 YP_617086.1 CDS Sala_2044 NC_008048.1 2153741 2155585 D twin-arginine translocation pathway signal 2153741..2155585 Sphingopyxis alaskensis RB2256 4079941 YP_617087.1 CDS Sala_2045 NC_008048.1 2155601 2156077 R hypothetical protein complement(2155601..2156077) Sphingopyxis alaskensis RB2256 4079942 YP_617088.1 CDS Sala_2046 NC_008048.1 2156127 2157812 R PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase complement(2156127..2157812) Sphingopyxis alaskensis RB2256 4080113 YP_617089.1 CDS Sala_2047 NC_008048.1 2157974 2158684 D two component transcriptional regulator 2157974..2158684 Sphingopyxis alaskensis RB2256 4080114 YP_617090.1 CDS Sala_2048 NC_008048.1 2158776 2160281 D sensor signal transduction histidine kinase 2158776..2160281 Sphingopyxis alaskensis RB2256 4080115 YP_617091.1 CDS Sala_2049 NC_008048.1 2160334 2160780 D HPr kinase 2160334..2160780 Sphingopyxis alaskensis RB2256 4080116 YP_617092.1 CDS Sala_2050 NC_008048.1 2160777 2161727 D hypothetical protein 2160777..2161727 Sphingopyxis alaskensis RB2256 4080117 YP_617093.1 CDS Sala_2051 NC_008048.1 2161742 2162170 D PTS system fructose subfamily transporter subunit IIA 2161742..2162170 Sphingopyxis alaskensis RB2256 4080118 YP_617094.1 CDS Sala_2052 NC_008048.1 2162167 2162445 D hypothetical protein 2162167..2162445 Sphingopyxis alaskensis RB2256 4080119 YP_617095.1 CDS Sala_2053 NC_008048.1 2162452 2163264 D tRNA/rRNA methyltransferase SpoU 2162452..2163264 Sphingopyxis alaskensis RB2256 4080120 YP_617096.1 CDS Sala_2054 NC_008048.1 2163426 2164130 D hypothetical protein 2163426..2164130 Sphingopyxis alaskensis RB2256 4080121 YP_617097.1 CDS Sala_2055 NC_008048.1 2164284 2165639 R hypothetical protein complement(2164284..2165639) Sphingopyxis alaskensis RB2256 4080122 YP_617098.1 CDS Sala_2056 NC_008048.1 2165865 2166341 R hypothetical protein complement(2165865..2166341) Sphingopyxis alaskensis RB2256 4080123 YP_617099.1 CDS Sala_2057 NC_008048.1 2166468 2167001 R hypothetical protein complement(2166468..2167001) Sphingopyxis alaskensis RB2256 4080124 YP_617100.1 CDS dnaK NC_008048.1 2167155 2169059 D heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 2167155..2169059 Sphingopyxis alaskensis RB2256 4080125 YP_617101.1 CDS Sala_2059 NC_008048.1 2169178 2170308 D chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ 2169178..2170308 Sphingopyxis alaskensis RB2256 4080126 YP_617102.1 CDS Sala_2060 NC_008048.1 2170504 2171373 R Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor SigJ complement(2170504..2171373) Sphingopyxis alaskensis RB2256 4080127 YP_617103.1 CDS Sala_2061 NC_008048.1 2171373 2171828 R alkylhydroperoxidase AhpD core complement(2171373..2171828) Sphingopyxis alaskensis RB2256 4080128 YP_617104.1 CDS Sala_2062 NC_008048.1 2171966 2172343 D DoxX protein 2171966..2172343 Sphingopyxis alaskensis RB2256 4080129 YP_617105.1 CDS Sala_2063 NC_008048.1 2172838 2173845 R PhoH-like protein complement(2172838..2173845) Sphingopyxis alaskensis RB2256 4080130 YP_617106.1 CDS Sala_2064 NC_008048.1 2173981 2175315 R catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase complement(2173981..2175315) Sphingopyxis alaskensis RB2256 4080131 YP_617107.1 CDS Sala_2065 NC_008048.1 2175323 2176108 R phospholipid/glycerol acyltransferase complement(2175323..2176108) Sphingopyxis alaskensis RB2256 4080132 YP_617108.1 CDS Sala_2066 NC_008048.1 2176080 2176505 R ferric uptake regulator family protein complement(2176080..2176505) Sphingopyxis alaskensis RB2256 4080002 YP_617109.1 CDS Sala_2067 NC_008048.1 2176641 2177075 R MucR family transcriptional regulator complement(2176641..2177075) Sphingopyxis alaskensis RB2256 4080003 YP_617110.1 CDS Sala_2068 NC_008048.1 2177198 2177626 R N-acetyltransferase GCN5 complement(2177198..2177626) Sphingopyxis alaskensis RB2256 4080004 YP_617111.1 CDS Sala_2069 NC_008048.1 2177677 2178303 R peptidase M22, glycoprotease complement(2177677..2178303) Sphingopyxis alaskensis RB2256 4080005 YP_617112.1 CDS Sala_2070 NC_008048.1 2178296 2178889 R hypothetical protein complement(2178296..2178889) Sphingopyxis alaskensis RB2256 4080006 YP_617113.1 CDS Sala_2071 NC_008048.1 2178915 2179487 R nitrogen-fixing NifU-like protein complement(2178915..2179487) Sphingopyxis alaskensis RB2256 4080007 YP_617114.1 CDS Sala_2072 NC_008048.1 2179551 2180423 D hypothetical protein 2179551..2180423 Sphingopyxis alaskensis RB2256 4080008 YP_617115.1 CDS Sala_2073 NC_008048.1 2180741 2181220 D heat shock protein Hsp20 2180741..2181220 Sphingopyxis alaskensis RB2256 4080010 YP_617116.1 CDS Sala_2074 NC_008048.1 2181312 2181833 D heat shock protein Hsp20 2181312..2181833 Sphingopyxis alaskensis RB2256 4080011 YP_617117.1 CDS Sala_2075 NC_008048.1 2181862 2182350 D hypothetical protein 2181862..2182350 Sphingopyxis alaskensis RB2256 4080012 YP_617118.1 CDS Sala_2076 NC_008048.1 2182334 2182603 R Usg-like protein complement(2182334..2182603) Sphingopyxis alaskensis RB2256 4080013 YP_617119.1 CDS Sala_2077 NC_008048.1 2182600 2182836 R hypothetical protein complement(2182600..2182836) Sphingopyxis alaskensis RB2256 4080014 YP_617120.1 CDS Sala_2078 NC_008048.1 2183094 2183408 D chaperonin Cpn10 2183094..2183408 Sphingopyxis alaskensis RB2256 4080015 YP_617121.1 CDS groEL NC_008048.1 2183461 2185080 D 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL 2183461..2185080 Sphingopyxis alaskensis RB2256 4080016 YP_617122.1 CDS Sala_2080 NC_008048.1 2185256 2185882 R fumarylacetoacetate (FAA) hydrolase complement(2185256..2185882) Sphingopyxis alaskensis RB2256 4080017 YP_617123.1 CDS Sala_2081 NC_008048.1 2186256 2186903 R DSBA oxidoreductase complement(2186256..2186903) Sphingopyxis alaskensis RB2256 4080018 YP_617124.1 CDS Sala_2082 NC_008048.1 2187476 2188591 D secretion protein HlyD 2187476..2188591 Sphingopyxis alaskensis RB2256 4080019 YP_617125.1 CDS Sala_2083 NC_008048.1 2188781 2190370 D EmrB/QacA family drug resistance transporter 2188781..2190370 Sphingopyxis alaskensis RB2256 4080057 YP_617126.1 CDS Sala_2084 NC_008048.1 2190457 2191347 R FF domain-containing protein complement(2190457..2191347) Sphingopyxis alaskensis RB2256 4080058 YP_617127.1 CDS Sala_2085 NC_008048.1 2191406 2192014 D TetR family transcriptional regulator 2191406..2192014 Sphingopyxis alaskensis RB2256 4080059 YP_617128.1 CDS Sala_2086 NC_008048.1 2192298 2192606 D hypothetical protein 2192298..2192606 Sphingopyxis alaskensis RB2256 4080060 YP_617129.1 CDS Sala_2087 NC_008048.1 2192584 2192916 D XRE family transcriptional regulator 2192584..2192916 Sphingopyxis alaskensis RB2256 4080061 YP_617130.1 CDS Sala_2088 NC_008048.1 2193000 2193650 R glutathione S-transferase-like protein complement(2193000..2193650) Sphingopyxis alaskensis RB2256 4080062 YP_617131.1 CDS Sala_2089 NC_008048.1 2193821 2195500 D signal transduction histidine kinase 2193821..2195500 Sphingopyxis alaskensis RB2256 4080063 YP_617132.1 CDS Sala_2090 NC_008048.1 2195553 2196569 D LacI family transcriptional regulator 2195553..2196569 Sphingopyxis alaskensis RB2256 4080064 YP_617133.1 CDS Sala_2091 NC_008048.1 2196655 2198862 D TonB-dependent siderophore receptor 2196655..2198862 Sphingopyxis alaskensis RB2256 4080065 YP_617134.1 CDS Sala_2092 NC_008048.1 2198941 2199729 R hypothetical protein complement(2198941..2199729) Sphingopyxis alaskensis RB2256 4080066 YP_617135.1 CDS Sala_2093 NC_008048.1 2199964 2200236 D CopG/Arc/MetJ family transcriptional regulator 2199964..2200236 Sphingopyxis alaskensis RB2256 4080067 YP_617136.1 CDS Sala_2094 NC_008048.1 2200586 2201761 R hypothetical protein complement(2200586..2201761) Sphingopyxis alaskensis RB2256 4080068 YP_617137.1 CDS Sala_2095 NC_008048.1 2201761 2202498 R phage Gp37Gp68 complement(2201761..2202498) Sphingopyxis alaskensis RB2256 4080069 YP_617138.1 CDS Sala_2096 NC_008048.1 2202830 2205505 D aconitate hydratase 1 2202830..2205505 Sphingopyxis alaskensis RB2256 4080070 YP_617139.1 CDS Sala_2097 NC_008048.1 2205578 2205844 D hypothetical protein 2205578..2205844 Sphingopyxis alaskensis RB2256 4080071 YP_617140.1 CDS Sala_2098 NC_008048.1 2206004 2206975 R magnesium and cobalt transport protein CorA complement(2206004..2206975) Sphingopyxis alaskensis RB2256 4080073 YP_617141.1 CDS Sala_2099 NC_008048.1 2207073 2208107 R hypothetical protein complement(2207073..2208107) Sphingopyxis alaskensis RB2256 4080074 YP_617142.1 CDS Sala_2100 NC_008048.1 2208341 2208919 D nuclease 2208341..2208919 Sphingopyxis alaskensis RB2256 4080075 YP_617143.1 CDS Sala_2101 NC_008048.1 2208965 2209345 D crcB protein 2208965..2209345 Sphingopyxis alaskensis RB2256 4080076 YP_617144.1 CDS Sala_2102 NC_008048.1 2209342 2210559 D pseudouridine synthase RluD 2209342..2210559 Sphingopyxis alaskensis RB2256 4080077 YP_617145.1 CDS Sala_2103 NC_008048.1 2210591 2210827 D hypothetical protein 2210591..2210827 Sphingopyxis alaskensis RB2256 4080078 YP_617146.1 CDS Sala_2104 NC_008048.1 2210824 2211513 D ATP12 ATPase 2210824..2211513 Sphingopyxis alaskensis RB2256 4080079 YP_617147.1 CDS Sala_2105 NC_008048.1 2211590 2212690 D transposase, IS4 2211590..2212690 Sphingopyxis alaskensis RB2256 4080080 YP_617148.1 CDS Sala_2106 NC_008048.1 2212828 2213289 R hypothetical protein complement(2212828..2213289) Sphingopyxis alaskensis RB2256 4080081 YP_617149.1 CDS glpX NC_008048.1 2213344 2214315 D type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II 2213344..2214315 Sphingopyxis alaskensis RB2256 4080082 YP_617150.1 CDS Sala_2108 NC_008048.1 2214367 2216700 D decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 2214367..2216700 Sphingopyxis alaskensis RB2256 4080083 YP_617151.1 CDS Sala_2109 NC_008048.1 2216760 2218472 D diguanylate cyclase/phosphodiesterase 2216760..2218472 Sphingopyxis alaskensis RB2256 4080084 YP_617152.1 CDS Sala_2110 NC_008048.1 2218445 2219641 R polynucleotide adenylyltransferase complement(2218445..2219641) Sphingopyxis alaskensis RB2256 4080085 YP_617153.1 CDS Sala_2111 NC_008048.1 2219638 2220222 R NUDIX hydrolase complement(2219638..2220222) Sphingopyxis alaskensis RB2256 4080086 YP_617154.1 CDS Sala_2112 NC_008048.1 2220222 2220806 R hypothetical protein complement(2220222..2220806) Sphingopyxis alaskensis RB2256 4080087 YP_617155.1 CDS Sala_2113 NC_008048.1 2220862 2221365 R N-acetyltransferase GCN5 complement(2220862..2221365) Sphingopyxis alaskensis RB2256 4080088 YP_617156.1 CDS Sala_2114 NC_008048.1 2221402 2221827 D hypothetical protein 2221402..2221827 Sphingopyxis alaskensis RB2256 4080089 YP_617157.1 CDS Sala_2115 NC_008048.1 2221824 2222585 D short-chain dehydrogenase/reductase SDR 2221824..2222585 Sphingopyxis alaskensis RB2256 4080090 YP_617158.1 CDS Sala_2116 NC_008048.1 2222777 2224210 R succinate-semialdehyde dehydrogenase (NAD(P)+) complement(2222777..2224210) Sphingopyxis alaskensis RB2256 4080091 YP_617159.1 CDS Sala_2117 NC_008048.1 2224365 2224964 R hypothetical protein complement(2224365..2224964) Sphingopyxis alaskensis RB2256 4080092 YP_617160.1 CDS Sala_2118 NC_008048.1 2225011 2225931 D putative gluconolactonase precursor 2225011..2225931 Sphingopyxis alaskensis RB2256 4080093 YP_617161.1 CDS Sala_2119 NC_008048.1 2225942 2226631 D hypothetical protein 2225942..2226631 Sphingopyxis alaskensis RB2256 4080094 YP_617162.1 CDS Sala_2120 NC_008048.1 2226719 2227825 D hypothetical protein 2226719..2227825 Sphingopyxis alaskensis RB2256 4080095 YP_617163.1 CDS Sala_2121 NC_008048.1 2227822 2228469 D epoxide hydrolase domain-containing phosphatase 2227822..2228469 Sphingopyxis alaskensis RB2256 4080096 YP_617164.1 CDS Sala_2122 NC_008048.1 2228568 2229461 R LysR family transcriptional regulator complement(2228568..2229461) Sphingopyxis alaskensis RB2256 4080097 YP_617165.1 CDS Sala_2123 NC_008048.1 2229553 2230263 D 3-oxoacid CoA-transferase subunit A 2229553..2230263 Sphingopyxis alaskensis RB2256 4080098 YP_617166.1 CDS Sala_2124 NC_008048.1 2230263 2230898 D 3-oxoacid CoA-transferase subunit B 2230263..2230898 Sphingopyxis alaskensis RB2256 4080099 YP_617167.1 CDS Sala_2125 NC_008048.1 2230902 2231351 D hypothetical protein 2230902..2231351 Sphingopyxis alaskensis RB2256 4080100 YP_617168.1 CDS Sala_2126 NC_008048.1 2231398 2232375 D NAD-dependent epimerase/dehydratase 2231398..2232375 Sphingopyxis alaskensis RB2256 4080101 YP_617169.1 CDS Sala_2127 NC_008048.1 2232363 2233043 D glutathione S-transferase-like protein 2232363..2233043 Sphingopyxis alaskensis RB2256 4080102 YP_617170.1 CDS Sala_2128 NC_008048.1 2233157 2233759 R carotene hydroxylase complement(2233157..2233759) Sphingopyxis alaskensis RB2256 4080103 YP_617171.1 CDS Sala_2129 NC_008048.1 2233902 2235332 D dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 2233902..2235332 Sphingopyxis alaskensis RB2256 4080104 YP_617172.1 CDS Sala_2130 NC_008048.1 2235358 2236206 D beta-lactamase-like protein 2235358..2236206 Sphingopyxis alaskensis RB2256 4080105 YP_617173.1 CDS leuD NC_008048.1 2236208 2236801 D catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit 2236208..2236801 Sphingopyxis alaskensis RB2256 4080106 YP_617174.1 CDS Sala_2132 NC_008048.1 2236825 2237820 D zinc-binding alcohol dehydrogenase 2236825..2237820 Sphingopyxis alaskensis RB2256 4080107 YP_617175.1 CDS Sala_2133 NC_008048.1 2237892 2238095 D hypothetical protein 2237892..2238095 Sphingopyxis alaskensis RB2256 4080108 YP_617176.1 CDS Sala_2134 NC_008048.1 2238170 2238463 D hypothetical protein 2238170..2238463 Sphingopyxis alaskensis RB2256 4080109 YP_617177.1 CDS Sala_2135 NC_008048.1 2238783 2239109 R hypothetical protein complement(2238783..2239109) Sphingopyxis alaskensis RB2256 4080111 YP_617178.1 CDS Sala_2136 NC_008048.1 2239561 2240499 D 3-beta hydroxysteroid dehydrogenase/isomerase 2239561..2240499 Sphingopyxis alaskensis RB2256 4080133 YP_617179.1 CDS Sala_2137 NC_008048.1 2240558 2241358 D BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase 2240558..2241358 Sphingopyxis alaskensis RB2256 4080134 YP_617180.1 CDS Sala_2138 NC_008048.1 2241517 2242959 D function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain; putative oxidoreductase 2241517..2242959 Sphingopyxis alaskensis RB2256 4080135 YP_617181.1 CDS Sala_2139 NC_008048.1 2242980 2244113 D hypothetical protein 2242980..2244113 Sphingopyxis alaskensis RB2256 4080136 YP_617182.1 CDS Sala_2140 NC_008048.1 2244141 2248673 D glutamate synthase 2244141..2248673 Sphingopyxis alaskensis RB2256 4080137 YP_617183.1 CDS Sala_2141 NC_008048.1 2248787 2249215 D hypothetical protein 2248787..2249215 Sphingopyxis alaskensis RB2256 4080138 YP_617184.1 CDS Sala_2142 NC_008048.1 2249385 2250056 D glutathione S-transferase-like protein 2249385..2250056 Sphingopyxis alaskensis RB2256 4080139 YP_617185.1 CDS Sala_2143 NC_008048.1 2250165 2250983 R Involved in ubiquinone biosynthesis; 3-demethylubiquinone-9 3-methyltransferase complement(2250165..2250983) Sphingopyxis alaskensis RB2256 4080140 YP_617186.1 CDS Sala_2144 NC_008048.1 2251144 2252391 D catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase 2251144..2252391 Sphingopyxis alaskensis RB2256 4080141 YP_617187.1 CDS Sala_2145 NC_008048.1 2252474 2253040 R hypothetical protein complement(2252474..2253040) Sphingopyxis alaskensis RB2256 4080142 YP_617188.1 CDS Sala_2146 NC_008048.1 2253691 2255886 R catalase/peroxidase HPI complement(2253691..2255886) Sphingopyxis alaskensis RB2256 4080143 YP_617189.1 CDS Sala_2147 NC_008048.1 2256213 2257217 D 2-nitropropane dioxygenase 2256213..2257217 Sphingopyxis alaskensis RB2256 4080144 YP_617190.1 CDS Sala_2148 NC_008048.1 2257250 2257993 D hypothetical protein 2257250..2257993 Sphingopyxis alaskensis RB2256 4080145 YP_617191.1 CDS Sala_2149 NC_008048.1 2258079 2260376 D phosphoenolpyruvate-protein phosphotransferase PtsP 2258079..2260376 Sphingopyxis alaskensis RB2256 4080146 YP_617192.1 CDS Sala_2150 NC_008048.1 2260412 2261452 R hypothetical protein complement(2260412..2261452) Sphingopyxis alaskensis RB2256 4080147 YP_617193.1 CDS Sala_2151 NC_008048.1 2261505 2263064 R hypothetical protein complement(2261505..2263064) Sphingopyxis alaskensis RB2256 4080148 YP_617194.1 CDS Sala_2152 NC_008048.1 2263068 2264453 R NoeA host specific nodulation protein complement(2263068..2264453) Sphingopyxis alaskensis RB2256 4080149 YP_617195.1 CDS Sala_2153 NC_008048.1 2264459 2264668 R hypothetical protein complement(2264459..2264668) Sphingopyxis alaskensis RB2256 4080150 YP_617196.1 CDS Sala_2154 NC_008048.1 2264845 2265261 D glutathione-dependent formaldehyde-activating protein 2264845..2265261 Sphingopyxis alaskensis RB2256 4080151 YP_617197.1 CDS Sala_2155 NC_008048.1 2265243 2266622 R beta-lactamase complement(2265243..2266622) Sphingopyxis alaskensis RB2256 4080189 YP_617198.1 CDS Sala_2156 NC_008048.1 2266655 2267974 R recombination factor protein RarA complement(2266655..2267974) Sphingopyxis alaskensis RB2256 4080190 YP_617199.1 CDS Sala_2157 NC_008048.1 2267982 2269139 R group 1 glycosyl transferase complement(2267982..2269139) Sphingopyxis alaskensis RB2256 4080191 YP_617200.1 CDS Sala_2158 NC_008048.1 2269181 2270125 R hypothetical protein complement(2269181..2270125) Sphingopyxis alaskensis RB2256 4080192 YP_617201.1 CDS Sala_2159 NC_008048.1 2270145 2270651 R hypothetical protein complement(2270145..2270651) Sphingopyxis alaskensis RB2256 4080193 YP_617202.1 CDS Sala_2160 NC_008048.1 2271219 2272421 D mechanosensitive ion channel protein MscS 2271219..2272421 Sphingopyxis alaskensis RB2256 4080194 YP_617203.1 CDS Sala_2161 NC_008048.1 2272515 2272973 D MaoC-like dehydratase 2272515..2272973 Sphingopyxis alaskensis RB2256 4080195 YP_617204.1 CDS Sala_2162 NC_008048.1 2273025 2274206 D Acetyl-CoA C-acyltransferase 2273025..2274206 Sphingopyxis alaskensis RB2256 4080196 YP_617205.1 CDS Sala_2163 NC_008048.1 2274208 2274792 D carboxymuconolactone decarboxylase 2274208..2274792 Sphingopyxis alaskensis RB2256 4080197 YP_617206.1 CDS Sala_2164 NC_008048.1 2274810 2275100 D antibiotic biosynthesis monooxygenase 2274810..2275100 Sphingopyxis alaskensis RB2256 4080198 YP_617207.1 CDS Sala_2165 NC_008048.1 2275594 2276064 R MerR family transcriptional regulator complement(2275594..2276064) Sphingopyxis alaskensis RB2256 4080199 YP_617208.1 CDS Sala_2166 NC_008048.1 2276262 2276657 D glyoxalase/bleomycin resistance protein/dioxygenase 2276262..2276657 Sphingopyxis alaskensis RB2256 4080200 YP_617209.1 CDS Sala_2167 NC_008048.1 2276723 2277187 D general stress protein 2276723..2277187 Sphingopyxis alaskensis RB2256 4080201 YP_617210.1 CDS Sala_2168 NC_008048.1 2277263 2278363 D transposase, IS4 2277263..2278363 Sphingopyxis alaskensis RB2256 4080202 YP_617211.1 CDS Sala_2169 NC_008048.1 2278882 2279442 R hypothetical protein complement(2278882..2279442) Sphingopyxis alaskensis RB2256 4080203 YP_617212.1 CDS Sala_2170 NC_008048.1 2279593 2279829 D hypothetical protein 2279593..2279829 Sphingopyxis alaskensis RB2256 4080204 YP_617213.1 CDS Sala_2171 NC_008048.1 2279939 2281141 D glycine C-acetyltransferase 2279939..2281141 Sphingopyxis alaskensis RB2256 4080205 YP_617214.1 CDS Sala_2172 NC_008048.1 2281255 2283231 D periplasmic sensor hybrid histidine kinase 2281255..2283231 Sphingopyxis alaskensis RB2256 4080206 YP_617215.1 CDS Sala_2173 NC_008048.1 2283383 2284246 R hypothetical protein complement(2283383..2284246) Sphingopyxis alaskensis RB2256 4080207 YP_617216.1 CDS Sala_2174 NC_008048.1 2284387 2285361 R diacylglycerol kinase catalytic subunit complement(2284387..2285361) Sphingopyxis alaskensis RB2256 4080208 YP_617217.1 CDS Sala_2175 NC_008048.1 2285367 2285840 R hypothetical protein complement(2285367..2285840) Sphingopyxis alaskensis RB2256 4080209 YP_617218.1 CDS Sala_2176 NC_008048.1 2285973 2287181 D permease YjgP/YjgQ 2285973..2287181 Sphingopyxis alaskensis RB2256 4080210 YP_617219.1 CDS Sala_2177 NC_008048.1 2287181 2288281 D permease YjgP/YjgQ 2287181..2288281 Sphingopyxis alaskensis RB2256 4080211 YP_617220.1 CDS Sala_2178 NC_008048.1 2288319 2289425 R fatty acid desaturase complement(2288319..2289425) Sphingopyxis alaskensis RB2256 4080212 YP_617221.1 CDS Sala_2179 NC_008048.1 2289542 2290708 D hypothetical protein 2289542..2290708 Sphingopyxis alaskensis RB2256 4080213 YP_617222.1 CDS Sala_2180 NC_008048.1 2290718 2291488 R exodeoxyribonuclease III (xth) complement(2290718..2291488) Sphingopyxis alaskensis RB2256 4080214 YP_617223.1 CDS Sala_2181 NC_008048.1 2291622 2291990 R HesB/YadR/YfhF complement(2291622..2291990) Sphingopyxis alaskensis RB2256 4080215 YP_617224.1 CDS Sala_2182 NC_008048.1 2292062 2292763 R peptidase M23B complement(2292062..2292763) Sphingopyxis alaskensis RB2256 4080216 YP_617225.1 CDS Sala_2183 NC_008048.1 2292879 2293670 R hypothetical protein complement(2292879..2293670) Sphingopyxis alaskensis RB2256 4080217 YP_617226.1 CDS Sala_2184 NC_008048.1 2293670 2294131 R alkyl hydroperoxide reductase complement(2293670..2294131) Sphingopyxis alaskensis RB2256 4080218 YP_617227.1 CDS Sala_2185 NC_008048.1 2294128 2296845 R glutamate-ammonia-ligase adenylyltransferase complement(2294128..2296845) Sphingopyxis alaskensis RB2256 4080219 YP_617228.1 CDS Sala_2186 NC_008048.1 2296991 2297785 R in Caulobacter crescentus, CC3477 is differentially expressed in minimal salts media with glucose as compared to complex media; two-component response regulator complement(2296991..2297785) Sphingopyxis alaskensis RB2256 4080220 YP_617229.1 CDS tgt NC_008048.1 2298168 2299295 R Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase complement(2298168..2299295) Sphingopyxis alaskensis RB2256 4080221 YP_617230.1 CDS Sala_2188 NC_008048.1 2299482 2299970 R hemerythrin HHE cation binding protein complement(2299482..2299970) Sphingopyxis alaskensis RB2256 4080222 YP_617231.1 CDS Sala_2189 NC_008048.1 2300034 2302223 R PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase complement(2300034..2302223) Sphingopyxis alaskensis RB2256 4080223 YP_617232.1 CDS Sala_2190 NC_008048.1 2302710 2303378 D XRE family transcriptional regulator 2302710..2303378 Sphingopyxis alaskensis RB2256 4080224 YP_617233.1 CDS queA NC_008048.1 2303438 2304493 R Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase complement(2303438..2304493) Sphingopyxis alaskensis RB2256 4080225 YP_617234.1 CDS Sala_2192 NC_008048.1 2304518 2305234 R peptidyl-prolyl isomerase complement(2304518..2305234) Sphingopyxis alaskensis RB2256 4080226 YP_617235.1 CDS coaD NC_008048.1 2305319 2305825 R Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase complement(2305319..2305825) Sphingopyxis alaskensis RB2256 4080227 YP_617236.1 CDS Sala_2194 NC_008048.1 2305825 2306745 R polyprenyl synthetase complement(2305825..2306745) Sphingopyxis alaskensis RB2256 4080152 YP_617237.1 CDS Sala_2195 NC_008048.1 2306752 2307015 R exodeoxyribonuclease VII small subunit complement(2306752..2307015) Sphingopyxis alaskensis RB2256 4080153 YP_617238.1 CDS Sala_2196 NC_008048.1 2307398 2308000 D hypothetical protein 2307398..2308000 Sphingopyxis alaskensis RB2256 4080154 YP_617239.1 CDS Sala_2197 NC_008048.1 2308085 2310328 D catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase II 2308085..2310328 Sphingopyxis alaskensis RB2256 4080155 YP_617240.1 CDS Sala_2198 NC_008048.1 2310443 2311189 D hypothetical protein 2310443..2311189 Sphingopyxis alaskensis RB2256 4080156 YP_617241.1 CDS Sala_2199 NC_008048.1 2311194 2312012 R hypothetical protein complement(2311194..2312012) Sphingopyxis alaskensis RB2256 4080157 YP_617242.1 CDS Sala_2200 NC_008048.1 2312125 2312799 D nitroreductase 2312125..2312799 Sphingopyxis alaskensis RB2256 4080158 YP_617243.1 CDS Sala_2201 NC_008048.1 2312828 2314078 D hypothetical protein 2312828..2314078 Sphingopyxis alaskensis RB2256 4080159 YP_617244.1 CDS Sala_2202 NC_008048.1 2314092 2314496 R hypothetical protein complement(2314092..2314496) Sphingopyxis alaskensis RB2256 4080160 YP_617245.1 CDS engA NC_008048.1 2314827 2316197 R EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA complement(2314827..2316197) Sphingopyxis alaskensis RB2256 4080161 YP_617246.1 CDS Sala_2204 NC_008048.1 2316236 2317570 R Pyrrolo-quinoline quinone complement(2316236..2317570) Sphingopyxis alaskensis RB2256 4080162 YP_617247.1 CDS Sala_2205 NC_008048.1 2317572 2318333 R hypothetical protein complement(2317572..2318333) Sphingopyxis alaskensis RB2256 4080163 YP_617248.1 CDS panB NC_008048.1 2318435 2319298 R catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase complement(2318435..2319298) Sphingopyxis alaskensis RB2256 4080164 YP_617249.1 CDS Sala_2207 NC_008048.1 2319426 2319848 D hypothetical protein 2319426..2319848 Sphingopyxis alaskensis RB2256 4080165 YP_617250.1 CDS Sala_2208 NC_008048.1 2319973 2320194 D XRE family transcriptional regulator 2319973..2320194 Sphingopyxis alaskensis RB2256 4080166 YP_617251.1 CDS Sala_2209 NC_008048.1 2320325 2321392 R glycerophosphoryl diester phosphodiesterase complement(2320325..2321392) Sphingopyxis alaskensis RB2256 4080167 YP_617252.1 CDS Sala_2210 NC_008048.1 2321389 2321739 R hypothetical protein complement(2321389..2321739) Sphingopyxis alaskensis RB2256 4080168 YP_617253.1 CDS Sala_2211 NC_008048.1 2321779 2322477 R cyclic nucleotide-binding protein complement(2321779..2322477) Sphingopyxis alaskensis RB2256 4080169 YP_617254.1 CDS Sala_2212 NC_008048.1 2322722 2324095 D phospho-2-dehydro-3-deoxyheptonate aldolase 2322722..2324095 Sphingopyxis alaskensis RB2256 4080170 YP_617255.1 CDS Sala_2213 NC_008048.1 2324212 2325732 R peptidase M28 complement(2324212..2325732) Sphingopyxis alaskensis RB2256 4080171 YP_617256.1 CDS Sala_2214 NC_008048.1 2325907 2326710 R HpcH/HpaI aldolase complement(2325907..2326710) Sphingopyxis alaskensis RB2256 4080285 YP_617257.1 CDS Sala_2215 NC_008048.1 2326796 2327710 D hypothetical protein 2326796..2327710 Sphingopyxis alaskensis RB2256 4080286 YP_617258.1 CDS Sala_2216 NC_008048.1 2327712 2328158 D hypothetical protein 2327712..2328158 Sphingopyxis alaskensis RB2256 4080287 YP_617259.1 CDS Sala_2217 NC_008048.1 2328228 2328794 R N-acetyltransferase GCN5 complement(2328228..2328794) Sphingopyxis alaskensis RB2256 4080288 YP_617260.1 CDS Sala_2218 NC_008048.1 2328791 2329363 R hypothetical protein complement(2328791..2329363) Sphingopyxis alaskensis RB2256 4080289 YP_617261.1 CDS Sala_2219 NC_008048.1 2329466 2330572 D catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 2329466..2330572 Sphingopyxis alaskensis RB2256 4080290 YP_617262.1 CDS Sala_2220 NC_008048.1 2330709 2331629 D Male sterility-like protein 2330709..2331629 Sphingopyxis alaskensis RB2256 4080291 YP_617263.1 CDS Sala_2221 NC_008048.1 2331783 2333768 D signal peptide peptidase SppA, 67K type 2331783..2333768 Sphingopyxis alaskensis RB2256 4080292 YP_617264.1 CDS Sala_2222 NC_008048.1 2333868 2334773 R alpha/beta hydrolase complement(2333868..2334773) Sphingopyxis alaskensis RB2256 4080293 YP_617265.1 CDS Sala_2223 NC_008048.1 2335130 2335753 R hypothetical protein complement(2335130..2335753) Sphingopyxis alaskensis RB2256 4080294 YP_617266.1 CDS Sala_2224 NC_008048.1 2335816 2336277 D glutathione-dependent formaldehyde-activating protein 2335816..2336277 Sphingopyxis alaskensis RB2256 4080295 YP_617267.1 CDS Sala_2225 NC_008048.1 2336317 2337714 R dihydrolipoamide dehydrogenase complement(2336317..2337714) Sphingopyxis alaskensis RB2256 4080296 YP_617268.1 CDS Sala_2226 NC_008048.1 2337759 2338118 R excinuclease ABC subunit C complement(2337759..2338118) Sphingopyxis alaskensis RB2256 4080297 YP_617269.1 CDS Sala_2227 NC_008048.1 2338186 2339400 R 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase complement(2338186..2339400) Sphingopyxis alaskensis RB2256 4080298 YP_617270.1 CDS sucA NC_008048.1 2339422 2342244 R SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component complement(2339422..2342244) Sphingopyxis alaskensis RB2256 4080299 YP_617271.1 CDS Sala_2229 NC_008048.1 2342333 2343223 R succinyl-CoA synthetase subunit alpha complement(2342333..2343223) Sphingopyxis alaskensis RB2256 4080300 YP_617272.1 CDS Sala_2230 NC_008048.1 2343349 2344311 R Catalyzes the reversible oxidation of malate to oxaloacetate; malate dehydrogenase complement(2343349..2344311) Sphingopyxis alaskensis RB2256 4080301 YP_617273.1 CDS Sala_2231 NC_008048.1 2344542 2345639 D hypothetical protein 2344542..2345639 Sphingopyxis alaskensis RB2256 4080302 YP_617274.1 CDS Sala_2232 NC_008048.1 2345592 2346731 R AFG1-like ATPase complement(2345592..2346731) Sphingopyxis alaskensis RB2256 4080303 YP_617275.1 CDS Sala_2233 NC_008048.1 2346728 2347093 R thioesterase superfamily protein complement(2346728..2347093) Sphingopyxis alaskensis RB2256 4080247 YP_617276.1 CDS sdhB NC_008048.1 2347216 2347998 R part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit complement(2347216..2347998) Sphingopyxis alaskensis RB2256 4080248 YP_617277.1 CDS Sala_2235 NC_008048.1 2348065 2349672 D hypothetical protein 2348065..2349672 Sphingopyxis alaskensis RB2256 4080249 YP_617278.1 CDS Sala_2236 NC_008048.1 2349669 2350379 D HAD family hydrolase 2349669..2350379 Sphingopyxis alaskensis RB2256 4080250 YP_617279.1 CDS Sala_2237 NC_008048.1 2350379 2351518 D hypothetical protein 2350379..2351518 Sphingopyxis alaskensis RB2256 4080251 YP_617280.1 CDS Sala_2238 NC_008048.1 2351515 2352618 D hypothetical protein 2351515..2352618 Sphingopyxis alaskensis RB2256 4080252 YP_617281.1 CDS Sala_2239 NC_008048.1 2352615 2353043 D histidine triad (HIT) protein 2352615..2353043 Sphingopyxis alaskensis RB2256 4080253 YP_617282.1 CDS Sala_2240 NC_008048.1 2353031 2353795 R nucleotidyl transferase complement(2353031..2353795) Sphingopyxis alaskensis RB2256 4080254 YP_617283.1 CDS Sala_2241 NC_008048.1 2353792 2354586 R hypothetical protein complement(2353792..2354586) Sphingopyxis alaskensis RB2256 4080255 YP_617284.1 CDS Sala_2242 NC_008048.1 2354583 2355584 R Alpha/beta hydrolase fold-3 complement(2354583..2355584) Sphingopyxis alaskensis RB2256 4080256 YP_617285.1 CDS Sala_2243 NC_008048.1 2355631 2356461 D similar to enzymes related to diacylglycerol kinase; sphingosine kinase 2355631..2356461 Sphingopyxis alaskensis RB2256 4080257 YP_617286.1 CDS Sala_2244 NC_008048.1 2356458 2357306 D metallophosphoesterase 2356458..2357306 Sphingopyxis alaskensis RB2256 4080258 YP_617287.1 CDS Sala_2245 NC_008048.1 2357356 2358447 D hypothetical protein 2357356..2358447 Sphingopyxis alaskensis RB2256 4080259 YP_617288.1 CDS Sala_2246 NC_008048.1 2358444 2359484 D hypothetical protein 2358444..2359484 Sphingopyxis alaskensis RB2256 4080260 YP_617289.1 CDS Sala_2247 NC_008048.1 2359665 2361158 R peptidase S1C, Do complement(2359665..2361158) Sphingopyxis alaskensis RB2256 4080261 YP_617290.1 CDS Sala_2248 NC_008048.1 2361286 2362137 R hypothetical protein complement(2361286..2362137) Sphingopyxis alaskensis RB2256 4080262 YP_617291.1 CDS Sala_2249 NC_008048.1 2362137 2363297 R HflK protein complement(2362137..2363297) Sphingopyxis alaskensis RB2256 4080263 YP_617292.1 CDS Sala_2250 NC_008048.1 2363348 2364367 D chromosome partitioning ATPase 2363348..2364367 Sphingopyxis alaskensis RB2256 4080264 YP_617293.1 CDS Sala_2251 NC_008048.1 2364367 2364789 D CoA-binding protein 2364367..2364789 Sphingopyxis alaskensis RB2256 4080265 YP_617294.1 CDS Sala_2252 NC_008048.1 2364873 2367161 D twin-arginine translocation pathway signal 2364873..2367161 Sphingopyxis alaskensis RB2256 4080266 YP_617295.1 CDS Sala_2253 NC_008048.1 2367158 2368153 D ferrochelatase 2367158..2368153 Sphingopyxis alaskensis RB2256 4080556 YP_617296.1 CDS Sala_2254 NC_008048.1 2368246 2369745 D hypothetical protein 2368246..2369745 Sphingopyxis alaskensis RB2256 4080557 YP_617297.1 CDS Sala_2255 NC_008048.1 2369834 2370556 D acetoacetyl-CoA reductase 2369834..2370556 Sphingopyxis alaskensis RB2256 4080558 YP_617298.1 CDS Sala_2256 NC_008048.1 2370719 2370967 D hypothetical protein 2370719..2370967 Sphingopyxis alaskensis RB2256 4080559 YP_617299.1 CDS Sala_2257 NC_008048.1 2370952 2371809 R hypothetical protein complement(2370952..2371809) Sphingopyxis alaskensis RB2256 4080560 YP_617300.1 CDS Sala_2258 NC_008048.1 2371949 2376667 R NAD-glutamate dehydrogenase complement(2371949..2376667) Sphingopyxis alaskensis RB2256 4080561 YP_617301.1 CDS Sala_2259 NC_008048.1 2376832 2378184 R hypothetical protein complement(2376832..2378184) Sphingopyxis alaskensis RB2256 4080562 YP_617302.1 CDS Sala_2260 NC_008048.1 2378504 2379148 R TetR family transcriptional regulator complement(2378504..2379148) Sphingopyxis alaskensis RB2256 4080563 YP_617303.1 CDS Sala_2261 NC_008048.1 2379675 2380337 D protein-L-isoaspartate(D-aspartate) O-methyltransferase 2379675..2380337 Sphingopyxis alaskensis RB2256 4080565 YP_617304.1 CDS Sala_2262 NC_008048.1 2380376 2381869 D Type I secretion outer membrane protein, TolC 2380376..2381869 Sphingopyxis alaskensis RB2256 4080566 YP_617305.1 CDS Sala_2263 NC_008048.1 2381973 2382398 D hypothetical protein 2381973..2382398 Sphingopyxis alaskensis RB2256 4080567 YP_617306.1 CDS Sala_2264 NC_008048.1 2382600 2383469 R NUDIX hydrolase complement(2382600..2383469) Sphingopyxis alaskensis RB2256 4080568 YP_617307.1 CDS Sala_2265 NC_008048.1 2383469 2384755 R twin-arginine translocation pathway signal complement(2383469..2384755) Sphingopyxis alaskensis RB2256 4080569 YP_617308.1 CDS Sala_2266 NC_008048.1 2384752 2385753 R HhH-GPD complement(2384752..2385753) Sphingopyxis alaskensis RB2256 4080570 YP_617309.1 CDS Sala_2267 NC_008048.1 2385926 2386522 D hypothetical protein 2385926..2386522 Sphingopyxis alaskensis RB2256 4080571 YP_617310.1 CDS Sala_2268 NC_008048.1 2386533 2387246 D protein-disulfide isomerase 2386533..2387246 Sphingopyxis alaskensis RB2256 4080572 YP_617311.1 CDS Sala_2269 NC_008048.1 2387282 2388019 D protein-disulfide isomerase 2387282..2388019 Sphingopyxis alaskensis RB2256 4080573 YP_617312.1 CDS Sala_2270 NC_008048.1 2388159 2391602 D chromosome segregation protein SMC 2388159..2391602 Sphingopyxis alaskensis RB2256 4080727 YP_617313.1 CDS ubiA NC_008048.1 2391765 2392673 R UbiA prenyltransferase family catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin; 4-hydroxybenzoate polyprenyltransferase complement(2391765..2392673) Sphingopyxis alaskensis RB2256 4080728 YP_617314.1 CDS Sala_2272 NC_008048.1 2392720 2393379 R hypothetical protein complement(2392720..2393379) Sphingopyxis alaskensis RB2256 4080729 YP_617315.1 CDS Sala_2273 NC_008048.1 2393376 2393957 R TadE-like protein complement(2393376..2393957) Sphingopyxis alaskensis RB2256 4080730 YP_617316.1 CDS Sala_2274 NC_008048.1 2393954 2395954 R hypothetical protein complement(2393954..2395954) Sphingopyxis alaskensis RB2256 4080731 YP_617317.1 CDS Sala_2275 NC_008048.1 2396158 2396907 D in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 2396158..2396907 Sphingopyxis alaskensis RB2256 4080732 YP_617318.1 CDS Sala_2276 NC_008048.1 2397051 2398985 D proprotein convertase, P 2397051..2398985 Sphingopyxis alaskensis RB2256 4080733 YP_617319.1 CDS Sala_2277 NC_008048.1 2399025 2400407 D glutamate--cysteine ligase 2399025..2400407 Sphingopyxis alaskensis RB2256 4080734 YP_617320.1 CDS Sala_2278 NC_008048.1 2400422 2400625 D hypothetical protein 2400422..2400625 Sphingopyxis alaskensis RB2256 4080735 YP_617321.1 CDS Sala_2279 NC_008048.1 2400773 2402941 D binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA 2400773..2402941 Sphingopyxis alaskensis RB2256 4080736 YP_617322.1 CDS Sala_2280 NC_008048.1 2403015 2404559 D hypothetical protein 2403015..2404559 Sphingopyxis alaskensis RB2256 4080737 YP_617323.1 CDS Sala_2281 NC_008048.1 2404553 2405314 R hypothetical protein complement(2404553..2405314) Sphingopyxis alaskensis RB2256 4080738 YP_617324.1 CDS Sala_2282 NC_008048.1 2405311 2406348 R AraC family transcriptional regulator complement(2405311..2406348) Sphingopyxis alaskensis RB2256 4080739 YP_617325.1 CDS Sala_2283 NC_008048.1 2406345 2406818 R hypothetical protein complement(2406345..2406818) Sphingopyxis alaskensis RB2256 4080740 YP_617326.1 CDS Sala_2284 NC_008048.1 2406916 2408460 D peptidase S1 and S6, chymotrypsin/Hap 2406916..2408460 Sphingopyxis alaskensis RB2256 4080741 YP_617327.1 CDS Sala_2285 NC_008048.1 2408501 2409193 R carboxymethylenebutenolidase complement(2408501..2409193) Sphingopyxis alaskensis RB2256 4080742 YP_617328.1 CDS Sala_2286 NC_008048.1 2410077 2411606 D produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 2410077..2411606 Sphingopyxis alaskensis RB2256 4080743 YP_617329.1 CDS Sala_2287 NC_008048.1 2411692 2412567 D Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 2411692..2412567 Sphingopyxis alaskensis RB2256 4080744 YP_617330.1 CDS Sala_2288 NC_008048.1 2412592 2414133 D Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 2412592..2414133 Sphingopyxis alaskensis RB2256 4080745 YP_617331.1 CDS atpC NC_008048.1 2414171 2414437 D produces ATP from ADP in the presence of a proton gradient across the membrane; the epsilon subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit epsilon 2414171..2414437 Sphingopyxis alaskensis RB2256 4080746 YP_617332.1 CDS Sala_2290 NC_008048.1 2414708 2416204 D type II secretion system protein E 2414708..2416204 Sphingopyxis alaskensis RB2256 4080786 YP_617333.1 CDS Sala_2291 NC_008048.1 2416407 2417405 D type 11 methyltransferase 2416407..2417405 Sphingopyxis alaskensis RB2256 4080787 YP_617334.1 CDS aat NC_008048.1 2417468 2418181 D leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase 2417468..2418181 Sphingopyxis alaskensis RB2256 4080788 YP_617335.1 CDS Sala_2293 NC_008048.1 2418603 2418989 R Provides the input to the respiratory chain from the NAD-linked dehydrogenases of the citric acid cycle. The complex couples the oxidation of NADH and the reduction of ubiquinone, to the generation of a proton gradient which is then used for ATP synthesis; NADH dehydrogenase complement(2418603..2418989) Sphingopyxis alaskensis RB2256 4080789 YP_617336.1 CDS Sala_2294 NC_008048.1 2419052 2419507 R hypothetical protein complement(2419052..2419507) Sphingopyxis alaskensis RB2256 4080790 YP_617337.1 CDS Sala_2295 NC_008048.1 2419560 2422079 D AMP-dependent synthetase and ligase 2419560..2422079 Sphingopyxis alaskensis RB2256 4080791 YP_617338.1 CDS Sala_2296 NC_008048.1 2422439 2424793 D PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 2422439..2424793 Sphingopyxis alaskensis RB2256 4080792 YP_617339.1 CDS Sala_2297 NC_008048.1 2424998 2425582 D hypothetical protein 2424998..2425582 Sphingopyxis alaskensis RB2256 4080793 YP_617340.1 CDS Sala_2298 NC_008048.1 2425689 2425958 R hypothetical protein complement(2425689..2425958) Sphingopyxis alaskensis RB2256 4080794 YP_617341.1 CDS Sala_2299 NC_008048.1 2426043 2427269 D hypothetical protein 2426043..2427269 Sphingopyxis alaskensis RB2256 4080795 YP_617342.1 CDS Sala_2300 NC_008048.1 2427469 2428332 D DNA methylase N-4/N-6 2427469..2428332 Sphingopyxis alaskensis RB2256 4080796 YP_617343.1 CDS Sala_2301 NC_008048.1 2428332 2428943 D hypothetical protein 2428332..2428943 Sphingopyxis alaskensis RB2256 4080797 YP_617344.1 CDS Sala_2302 NC_008048.1 2429035 2429592 R pseudouridine synthase, Rsu complement(2429035..2429592) Sphingopyxis alaskensis RB2256 4080798 YP_617345.1 CDS Sala_2303 NC_008048.1 2429807 2431639 R GTP-binding protein TypA complement(2429807..2431639) Sphingopyxis alaskensis RB2256 4080799 YP_617346.1 CDS Sala_2304 NC_008048.1 2431694 2432623 R hypothetical protein complement(2431694..2432623) Sphingopyxis alaskensis RB2256 4080800 YP_617347.1 CDS Sala_2305 NC_008048.1 2432623 2433546 R hypothetical protein complement(2432623..2433546) Sphingopyxis alaskensis RB2256 4080801 YP_617348.1 CDS Sala_2306 NC_008048.1 2433611 2434423 R purine phosphorylase family protein 1 complement(2433611..2434423) Sphingopyxis alaskensis RB2256 4080802 YP_617349.1 CDS Sala_2307 NC_008048.1 2434600 2435703 D putative cytochrome oxidase 2434600..2435703 Sphingopyxis alaskensis RB2256 4080803 YP_617350.1 CDS Sala_2308 NC_008048.1 2435781 2436992 D toxic anion resistance 2435781..2436992 Sphingopyxis alaskensis RB2256 4080804 YP_617351.1 CDS Sala_2309 NC_008048.1 2437003 2437737 D hypothetical protein 2437003..2437737 Sphingopyxis alaskensis RB2256 4080593 YP_617352.1 CDS Sala_2310 NC_008048.1 2438001 2439305 D FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2438001..2439305 Sphingopyxis alaskensis RB2256 4080595 YP_617353.1 CDS Sala_2311 NC_008048.1 2439302 2439709 D hypothetical protein 2439302..2439709 Sphingopyxis alaskensis RB2256 4080596 YP_617354.1 CDS Sala_2312 NC_008048.1 2439711 2440970 R membrane dipeptidase complement(2439711..2440970) Sphingopyxis alaskensis RB2256 4080597 YP_617355.1 CDS Sala_2313 NC_008048.1 2441066 2442241 D acyl-CoA dehydrogenase-like protein 2441066..2442241 Sphingopyxis alaskensis RB2256 4080598 YP_617356.1 CDS Sala_2314 NC_008048.1 2442298 2443506 D peptidase M20D, amidohydrolase 2442298..2443506 Sphingopyxis alaskensis RB2256 4080599 YP_617357.1 CDS Sala_2315 NC_008048.1 2443609 2445195 R L-aspartate oxidase complement(2443609..2445195) Sphingopyxis alaskensis RB2256 4080600 YP_617358.1 CDS Sala_2316 NC_008048.1 2445295 2446218 R ABC transporter complement(2445295..2446218) Sphingopyxis alaskensis RB2256 4080601 YP_617359.1 CDS Sala_2317 NC_008048.1 2446321 2446881 D hypothetical protein 2446321..2446881 Sphingopyxis alaskensis RB2256 4080602 YP_617360.1 CDS Sala_2318 NC_008048.1 2446944 2447213 D hypothetical protein 2446944..2447213 Sphingopyxis alaskensis RB2256 4080603 YP_617361.1 CDS Sala_2319 NC_008048.1 2447265 2448707 D C69 family peptidase 2447265..2448707 Sphingopyxis alaskensis RB2256 4080604 YP_617362.1 CDS Sala_2320 NC_008048.1 2448925 2450160 D hypothetical protein 2448925..2450160 Sphingopyxis alaskensis RB2256 4080605 YP_617363.1 CDS Sala_2321 NC_008048.1 2450240 2450638 D hypothetical protein 2450240..2450638 Sphingopyxis alaskensis RB2256 4080606 YP_617364.1 CDS Sala_2322 NC_008048.1 2450759 2451346 D hypothetical protein 2450759..2451346 Sphingopyxis alaskensis RB2256 4080607 YP_617365.1 CDS Sala_2323 NC_008048.1 2451375 2451941 D pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 2451375..2451941 Sphingopyxis alaskensis RB2256 4080608 YP_617366.1 CDS Sala_2324 NC_008048.1 2451941 2452153 D hypothetical protein 2451941..2452153 Sphingopyxis alaskensis RB2256 4080609 YP_617367.1 CDS Sala_2325 NC_008048.1 2452223 2452918 D endonuclease/exonuclease/phosphatase 2452223..2452918 Sphingopyxis alaskensis RB2256 4080610 YP_617368.1 CDS Sala_2326 NC_008048.1 2453252 2453590 D nitrogen regulatory protein P-II 2453252..2453590 Sphingopyxis alaskensis RB2256 4080611 YP_617369.1 CDS Sala_2327 NC_008048.1 2453609 2455078 D ammonium transporter 2453609..2455078 Sphingopyxis alaskensis RB2256 4080574 YP_617370.1 CDS Sala_2328 NC_008048.1 2455375 2457735 D TonB-dependent receptor 2455375..2457735 Sphingopyxis alaskensis RB2256 4080575 YP_617371.1 CDS Sala_2329 NC_008048.1 2458216 2458590 R glyoxalase/bleomycin resistance protein/dioxygenase complement(2458216..2458590) Sphingopyxis alaskensis RB2256 4080576 YP_617372.1 CDS Sala_2330 NC_008048.1 2458653 2459192 D HxlR family transcriptional regulator 2458653..2459192 Sphingopyxis alaskensis RB2256 4080577 YP_617373.1 CDS Sala_2331 NC_008048.1 2459232 2460818 R glucose-methanol-choline oxidoreductase complement(2459232..2460818) Sphingopyxis alaskensis RB2256 4080578 YP_617374.1 CDS Sala_2332 NC_008048.1 2460996 2461910 R hypothetical protein complement(2460996..2461910) Sphingopyxis alaskensis RB2256 4080579 YP_617375.1 CDS Sala_2333 NC_008048.1 2461903 2462307 R hypothetical protein complement(2461903..2462307) Sphingopyxis alaskensis RB2256 4080580 YP_617376.1 CDS Sala_2334 NC_008048.1 2462304 2462738 R hypothetical protein complement(2462304..2462738) Sphingopyxis alaskensis RB2256 4080581 YP_617377.1 CDS Sala_2335 NC_008048.1 2463004 2464785 R ATP-dependent DNA helicase RecQ complement(2463004..2464785) Sphingopyxis alaskensis RB2256 4080582 YP_617378.1 CDS Sala_2336 NC_008048.1 2464825 2465484 R major intrinsic protein complement(2464825..2465484) Sphingopyxis alaskensis RB2256 4080583 YP_617379.1 CDS Sala_2337 NC_008048.1 2465481 2465984 R protein tyrosine phosphatase complement(2465481..2465984) Sphingopyxis alaskensis RB2256 4080584 YP_617380.1 CDS Sala_2338 NC_008048.1 2465989 2466474 R glyoxalase/bleomycin resistance protein/dioxygenase complement(2465989..2466474) Sphingopyxis alaskensis RB2256 4080585 YP_617381.1 CDS Sala_2339 NC_008048.1 2466471 2466815 R ArsR family transcriptional regulator complement(2466471..2466815) Sphingopyxis alaskensis RB2256 4080586 YP_617382.1 CDS Sala_2340 NC_008048.1 2466936 2468750 R ABC transporter complement(2466936..2468750) Sphingopyxis alaskensis RB2256 4080587 YP_617383.1 CDS Sala_2341 NC_008048.1 2469115 2469690 R OstA-like protein complement(2469115..2469690) Sphingopyxis alaskensis RB2256 4080588 YP_617384.1 CDS Sala_2342 NC_008048.1 2469687 2470346 R hypothetical protein complement(2469687..2470346) Sphingopyxis alaskensis RB2256 4080589 YP_617385.1 CDS Sala_2343 NC_008048.1 2470343 2470960 R 3'-5' exonuclease complement(2470343..2470960) Sphingopyxis alaskensis RB2256 4080590 YP_617386.1 CDS Sala_2344 NC_008048.1 2471222 2471971 D cold-shock DNA-binding domain-containing protein 2471222..2471971 Sphingopyxis alaskensis RB2256 4080591 YP_617387.1 CDS Sala_2345 NC_008048.1 2472068 2472526 R hypothetical protein complement(2472068..2472526) Sphingopyxis alaskensis RB2256 4080592 YP_617388.1 CDS Sala_2346 NC_008048.1 2472523 2472744 R 4-oxalocrotonate tautomerase complement(2472523..2472744) Sphingopyxis alaskensis RB2256 4080747 YP_617389.1 CDS Sala_2347 NC_008048.1 2472758 2473234 R hypothetical protein complement(2472758..2473234) Sphingopyxis alaskensis RB2256 4080748 YP_617390.1 CDS Sala_2348 NC_008048.1 2473246 2473656 R glyoxalase/bleomycin resistance protein/dioxygenase complement(2473246..2473656) Sphingopyxis alaskensis RB2256 4080749 YP_617391.1 CDS Sala_2349 NC_008048.1 2473740 2474366 R glutathione S-transferase-like protein complement(2473740..2474366) Sphingopyxis alaskensis RB2256 4080750 YP_617392.1 CDS Sala_2350 NC_008048.1 2474369 2474995 R pyridoxamine 5'-phosphate oxidase-like FMN-binding protein complement(2474369..2474995) Sphingopyxis alaskensis RB2256 4080751 YP_617393.1 CDS Sala_2351 NC_008048.1 2475138 2476028 D LysR family transcriptional regulator 2475138..2476028 Sphingopyxis alaskensis RB2256 4080752 YP_617394.1 CDS Sala_2352 NC_008048.1 2476180 2477190 R MltA-interacting MipA complement(2476180..2477190) Sphingopyxis alaskensis RB2256 4080753 YP_617395.1 CDS Sala_2353 NC_008048.1 2477283 2477615 D hypothetical protein 2477283..2477615 Sphingopyxis alaskensis RB2256 4080754 YP_617396.1 CDS Sala_2354 NC_008048.1 2477662 2479590 D catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 2477662..2479590 Sphingopyxis alaskensis RB2256 4080755 YP_617397.1 CDS Sala_2355 NC_008048.1 2479796 2480215 R hypothetical protein complement(2479796..2480215) Sphingopyxis alaskensis RB2256 4080756 YP_617398.1 CDS Sala_2356 NC_008048.1 2480257 2480778 R lipoprotein signal peptidase complement(2480257..2480778) Sphingopyxis alaskensis RB2256 4080757 YP_617399.1 CDS ileS NC_008048.1 2480775 2483966 R IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase complement(2480775..2483966) Sphingopyxis alaskensis RB2256 4080758 YP_617400.1 CDS Sala_2358 NC_008048.1 2484071 2485000 R riboflavin biosynthesis protein RibF complement(2484071..2485000) Sphingopyxis alaskensis RB2256 4080759 YP_617401.1 CDS Sala_2359 NC_008048.1 2484997 2486178 R peptidase M19 complement(2484997..2486178) Sphingopyxis alaskensis RB2256 4080760 YP_617402.1 CDS Sala_2360 NC_008048.1 2486323 2486820 R dihydrofolate reductase complement(2486323..2486820) Sphingopyxis alaskensis RB2256 4080761 YP_617403.1 CDS Sala_2361 NC_008048.1 2486817 2487902 R With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit complement(2486817..2487902) Sphingopyxis alaskensis RB2256 4080762 YP_617404.1 CDS Sala_2362 NC_008048.1 2487907 2488416 R phosphoribosylaminoimidazole carboxylase catalytic subunit complement(2487907..2488416) Sphingopyxis alaskensis RB2256 4080763 YP_617405.1 CDS Sala_2363 NC_008048.1 2488624 2489268 D diguanylate cyclase 2488624..2489268 Sphingopyxis alaskensis RB2256 4080764 YP_617406.1 CDS Sala_2364 NC_008048.1 2489322 2489651 D hypothetical protein 2489322..2489651 Sphingopyxis alaskensis RB2256 4080765 YP_617407.1 CDS Sala_2365 NC_008048.1 2489685 2490251 D hypothetical protein 2489685..2490251 Sphingopyxis alaskensis RB2256 4080766 YP_617408.1 CDS Sala_2366 NC_008048.1 2490366 2490821 D Ferritin and Dps 2490366..2490821 Sphingopyxis alaskensis RB2256 4080805 YP_617409.1 CDS Sala_2367 NC_008048.1 2490869 2491273 R glutathione-dependent formaldehyde-activating protein complement(2490869..2491273) Sphingopyxis alaskensis RB2256 4080806 YP_617410.1 CDS Sala_2368 NC_008048.1 2491350 2492045 R type 11 helix-turn-helix protein complement(2491350..2492045) Sphingopyxis alaskensis RB2256 4080807 YP_617411.1 CDS Sala_2369 NC_008048.1 2492061 2492501 R hypothetical protein complement(2492061..2492501) Sphingopyxis alaskensis RB2256 4080808 YP_617412.1 CDS Sala_2370 NC_008048.1 2492752 2494644 D required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 2492752..2494644 Sphingopyxis alaskensis RB2256 4080810 YP_617413.1 CDS Sala_2371 NC_008048.1 2494676 2495110 D hypothetical protein 2494676..2495110 Sphingopyxis alaskensis RB2256 4080811 YP_617414.1 CDS Sala_2372 NC_008048.1 2495138 2496097 R sulfotransferase complement(2495138..2496097) Sphingopyxis alaskensis RB2256 4080812 YP_617415.1 CDS Sala_2373 NC_008048.1 2496139 2497017 R arylamine N-acetyltransferase complement(2496139..2497017) Sphingopyxis alaskensis RB2256 4080813 YP_617416.1 CDS Sala_2374 NC_008048.1 2497243 2497671 R OsmC-like protein complement(2497243..2497671) Sphingopyxis alaskensis RB2256 4080814 YP_617417.1 CDS Sala_2375 NC_008048.1 2497764 2498111 R hypothetical protein complement(2497764..2498111) Sphingopyxis alaskensis RB2256 4080815 YP_617418.1 CDS Sala_2376 NC_008048.1 2498143 2498607 R hypothetical protein complement(2498143..2498607) Sphingopyxis alaskensis RB2256 4080816 YP_617419.1 CDS Sala_2377 NC_008048.1 2498604 2499362 R hypothetical protein complement(2498604..2499362) Sphingopyxis alaskensis RB2256 4080817 YP_617420.1 CDS Sala_2378 NC_008048.1 2499373 2500077 R uracil-DNA glycosylase complement(2499373..2500077) Sphingopyxis alaskensis RB2256 4080818 YP_617421.1 CDS Sala_2379 NC_008048.1 2500247 2503351 R TonB-dependent receptor complement(2500247..2503351) Sphingopyxis alaskensis RB2256 4080819 YP_617422.1 CDS Sala_2380 NC_008048.1 2503512 2503841 D phosphoribosyl-ATP pyrophosphohydrolase 2503512..2503841 Sphingopyxis alaskensis RB2256 4080820 YP_617423.1 CDS Sala_2381 NC_008048.1 2503973 2504350 D histidine triad (HIT) protein 2503973..2504350 Sphingopyxis alaskensis RB2256 4080821 YP_617424.1 CDS Sala_2382 NC_008048.1 2504500 2510277 D alpha-2-macroglobulin-like protein 2504500..2510277 Sphingopyxis alaskensis RB2256 4080822 YP_617425.1 CDS Sala_2383 NC_008048.1 2510440 2512629 D penicillin-binding protein 1C 2510440..2512629 Sphingopyxis alaskensis RB2256 4080536 YP_617426.1 CDS Sala_2384 NC_008048.1 2512731 2514287 D amino acid permease 2512731..2514287 Sphingopyxis alaskensis RB2256 4080537 YP_617427.1 CDS Sala_2385 NC_008048.1 2514466 2515710 R Bcr/CflA subfamily drug resistance transporter complement(2514466..2515710) Sphingopyxis alaskensis RB2256 4080538 YP_617428.1 CDS Sala_2386 NC_008048.1 2515952 2516254 R hypothetical protein complement(2515952..2516254) Sphingopyxis alaskensis RB2256 4080539 YP_617429.1 CDS Sala_2387 NC_008048.1 2516281 2519160 R peptidase M16-like protein complement(2516281..2519160) Sphingopyxis alaskensis RB2256 4080540 YP_617430.1 CDS Sala_2388 NC_008048.1 2519256 2521412 R penicillin amidase complement(2519256..2521412) Sphingopyxis alaskensis RB2256 4080541 YP_617431.1 CDS Sala_2389 NC_008048.1 2521467 2523137 D leucyl aminopeptidase 2521467..2523137 Sphingopyxis alaskensis RB2256 4080542 YP_617432.1 CDS Sala_2390 NC_008048.1 2523359 2523784 R hypothetical protein complement(2523359..2523784) Sphingopyxis alaskensis RB2256 4080543 YP_617433.1 CDS Sala_2391 NC_008048.1 2523934 2526513 D ATPase 2523934..2526513 Sphingopyxis alaskensis RB2256 4080544 YP_617434.1 CDS Sala_2392 NC_008048.1 2526467 2526748 R hypothetical protein complement(2526467..2526748) Sphingopyxis alaskensis RB2256 4080545 YP_617435.1 CDS Sala_2393 NC_008048.1 2526745 2529879 R heavy metal efflux pump CzcA complement(2526745..2529879) Sphingopyxis alaskensis RB2256 4080546 YP_617436.1 CDS Sala_2394 NC_008048.1 2529876 2531108 R secretion protein HlyD complement(2529876..2531108) Sphingopyxis alaskensis RB2256 4080547 YP_617437.1 CDS Sala_2395 NC_008048.1 2531105 2532334 R CzcC family heavy metal RND efflux outer membrane protein complement(2531105..2532334) Sphingopyxis alaskensis RB2256 4080548 YP_617438.1 CDS Sala_2396 NC_008048.1 2532727 2533128 R hypothetical protein complement(2532727..2533128) Sphingopyxis alaskensis RB2256 4080549 YP_617439.1 CDS Sala_2397 NC_008048.1 2533378 2534631 R hypothetical protein complement(2533378..2534631) Sphingopyxis alaskensis RB2256 4080550 YP_617440.1 CDS Sala_2399 NC_008048.1 2535539 2535952 D hypothetical protein 2535539..2535952 Sphingopyxis alaskensis RB2256 4080551 YP_617441.1 CDS Sala_2400 NC_008048.1 2535893 2536843 R integrase catalytic subunit complement(2535893..2536843) Sphingopyxis alaskensis RB2256 4080552 YP_617442.1 CDS Sala_2401 NC_008048.1 2537090 2537818 D phage integrase 2537090..2537818 Sphingopyxis alaskensis RB2256 4080553 YP_617443.1 CDS Sala_2402 NC_008048.1 2537845 2538270 R hypothetical protein complement(2537845..2538270) Sphingopyxis alaskensis RB2256 4080554 YP_617444.1 CDS Sala_2403 NC_008048.1 2538365 2538694 D ArsR family transcriptional regulator 2538365..2538694 Sphingopyxis alaskensis RB2256 4080555 YP_617445.1 CDS Sala_2404 NC_008048.1 2538708 2539136 D arsenate reductase 2538708..2539136 Sphingopyxis alaskensis RB2256 4080842 YP_617446.1 CDS Sala_2405 NC_008048.1 2539146 2540210 D arsenical-resistance protein 2539146..2540210 Sphingopyxis alaskensis RB2256 4080843 YP_617447.1 CDS Sala_2406 NC_008048.1 2540216 2540971 D NADPH-dependent FMN reductase 2540216..2540971 Sphingopyxis alaskensis RB2256 4080844 YP_617448.1 CDS Sala_2407 NC_008048.1 2541134 2542459 D hypothetical protein 2541134..2542459 Sphingopyxis alaskensis RB2256 4080845 YP_617449.1 CDS Sala_2408 NC_008048.1 2542523 2543323 D histidine utilization repressor 2542523..2543323 Sphingopyxis alaskensis RB2256 4080846 YP_617450.1 CDS Sala_2409 NC_008048.1 2543330 2544064 R PepSY-associated TM helix family protein complement(2543330..2544064) Sphingopyxis alaskensis RB2256 4080847 YP_617451.1 CDS Sala_2410 NC_008048.1 2544061 2544765 R hypothetical protein complement(2544061..2544765) Sphingopyxis alaskensis RB2256 4080848 YP_617452.1 CDS Sala_2411 NC_008048.1 2544777 2547482 R TonB-dependent receptor complement(2544777..2547482) Sphingopyxis alaskensis RB2256 4080849 YP_617453.1 CDS Sala_2412 NC_008048.1 2547768 2548520 R ABC transporter complement(2547768..2548520) Sphingopyxis alaskensis RB2256 4080850 YP_617454.1 CDS Sala_2413 NC_008048.1 2548517 2549764 R cystathionine beta-lyase complement(2548517..2549764) Sphingopyxis alaskensis RB2256 4080851 YP_617455.1 CDS Sala_2414 NC_008048.1 2549754 2551946 R amino acid ABC transporter permease complement(2549754..2551946) Sphingopyxis alaskensis RB2256 4080852 YP_617456.1 CDS Sala_2415 NC_008048.1 2551943 2553040 R extracellular solute-binding protein complement(2551943..2553040) Sphingopyxis alaskensis RB2256 4080853 YP_617457.1 CDS Sala_2416 NC_008048.1 2553069 2553974 D LysR family transcriptional regulator 2553069..2553974 Sphingopyxis alaskensis RB2256 4080854 YP_617458.1 CDS Sala_2417 NC_008048.1 2554011 2556482 R TonB-dependent receptor, plug complement(2554011..2556482) Sphingopyxis alaskensis RB2256 4080855 YP_617459.1 CDS Sala_2418 NC_008048.1 2556595 2557053 D hypothetical protein 2556595..2557053 Sphingopyxis alaskensis RB2256 4080856 YP_617460.1 CDS Sala_2419 NC_008048.1 2557098 2557622 R hypothetical protein complement(2557098..2557622) Sphingopyxis alaskensis RB2256 4080857 YP_617461.1 CDS Sala_2420 NC_008048.1 2557624 2558067 R hypothetical protein complement(2557624..2558067) Sphingopyxis alaskensis RB2256 4080858 YP_617462.1 CDS Sala_2421 NC_008048.1 2558106 2559317 R copper resistance B complement(2558106..2559317) Sphingopyxis alaskensis RB2256 4080859 YP_617463.1 CDS Sala_2422 NC_008048.1 2559314 2561095 R copper-resistance protein CopA complement(2559314..2561095) Sphingopyxis alaskensis RB2256 4080860 YP_617464.1 CDS Sala_2423 NC_008048.1 2561269 2561853 R ECF subfamily RNA polymerase sigma-24 factor complement(2561269..2561853) Sphingopyxis alaskensis RB2256 4081129 YP_617465.1 CDS Sala_2424 NC_008048.1 2561850 2562287 R hypothetical protein complement(2561850..2562287) Sphingopyxis alaskensis RB2256 4081130 YP_617466.1 CDS Sala_2425 NC_008048.1 2562700 2563083 D copper resistance protein CopC 2562700..2563083 Sphingopyxis alaskensis RB2256 4081131 YP_617467.1 CDS Sala_2426 NC_008048.1 2563090 2564058 D copper resistance D 2563090..2564058 Sphingopyxis alaskensis RB2256 4081132 YP_617468.1 CDS Sala_2427 NC_008048.1 2564091 2564780 D AraC family transcriptional regulator 2564091..2564780 Sphingopyxis alaskensis RB2256 4081133 YP_617469.1 CDS Sala_2428 NC_008048.1 2564918 2565595 D type 12 methyltransferase 2564918..2565595 Sphingopyxis alaskensis RB2256 4081134 YP_617470.1 CDS Sala_2429 NC_008048.1 2565762 2568083 D copper-translocating P-type ATPase 2565762..2568083 Sphingopyxis alaskensis RB2256 4081135 YP_617471.1 CDS Sala_2430 NC_008048.1 2568136 2568612 D hypothetical protein 2568136..2568612 Sphingopyxis alaskensis RB2256 4081136 YP_617472.1 CDS Sala_2431 NC_008048.1 2568841 2569470 D cytochrome c family protein 2568841..2569470 Sphingopyxis alaskensis RB2256 4081137 YP_617473.1 CDS Sala_2432 NC_008048.1 2569656 2570933 D hypothetical protein 2569656..2570933 Sphingopyxis alaskensis RB2256 4081138 YP_617474.1 CDS Sala_2433 NC_008048.1 2571241 2573355 R TonB-dependent receptor complement(2571241..2573355) Sphingopyxis alaskensis RB2256 4081139 YP_617475.1 CDS Sala_2435 NC_008048.1 2574002 2574409 R MerR family transcriptional regulator complement(2574002..2574409) Sphingopyxis alaskensis RB2256 4081140 YP_617476.1 CDS Sala_2436 NC_008048.1 2574427 2575302 D glutaredoxin 2574427..2575302 Sphingopyxis alaskensis RB2256 4081141 YP_617477.1 CDS Sala_2437 NC_008048.1 2575405 2575767 D hypothetical protein 2575405..2575767 Sphingopyxis alaskensis RB2256 4081142 YP_617478.1 CDS Sala_2438 NC_008048.1 2575832 2576098 D hypothetical protein 2575832..2576098 Sphingopyxis alaskensis RB2256 4081143 YP_617479.1 CDS Sala_2439 NC_008048.1 2576165 2577391 D CzcC family heavy metal RND efflux outer membrane protein 2576165..2577391 Sphingopyxis alaskensis RB2256 4081144 YP_617480.1 CDS Sala_2440 NC_008048.1 2577388 2578614 D secretion protein HlyD 2577388..2578614 Sphingopyxis alaskensis RB2256 4081145 YP_617481.1 CDS Sala_2441 NC_008048.1 2578611 2581745 D heavy metal efflux pump CzcA 2578611..2581745 Sphingopyxis alaskensis RB2256 4081146 YP_617482.1 CDS Sala_2442 NC_008048.1 2581742 2582110 D putative copper efflux system periplasmic protein CusF 2581742..2582110 Sphingopyxis alaskensis RB2256 4081147 YP_617483.1 CDS Sala_2443 NC_008048.1 2582196 2582618 R MerR family transcriptional regulator complement(2582196..2582618) Sphingopyxis alaskensis RB2256 4081148 YP_617484.1 CDS Sala_2444 NC_008048.1 2582648 2583385 D cation efflux protein 2582648..2583385 Sphingopyxis alaskensis RB2256 4081321 YP_617485.1 CDS Sala_2445 NC_008048.1 2583448 2583819 D hypothetical protein 2583448..2583819 Sphingopyxis alaskensis RB2256 4081322 YP_617486.1 CDS Sala_2446 NC_008048.1 2583828 2584148 D hypothetical protein 2583828..2584148 Sphingopyxis alaskensis RB2256 4081323 YP_617487.1 CDS Sala_2447 NC_008048.1 2584208 2585479 D outer membrane efflux protein 2584208..2585479 Sphingopyxis alaskensis RB2256 4081324 YP_617488.1 CDS Sala_2448 NC_008048.1 2585484 2586632 D secretion protein HlyD 2585484..2586632 Sphingopyxis alaskensis RB2256 4081325 YP_617489.1 CDS Sala_2449 NC_008048.1 2586636 2589863 D heavy metal efflux pump CzcA 2586636..2589863 Sphingopyxis alaskensis RB2256 4081326 YP_617490.1 CDS Sala_2450 NC_008048.1 2590694 2590867 D transposase IS3/IS911 2590694..2590867 Sphingopyxis alaskensis RB2256 4081327 YP_617491.1 CDS Sala_2451 NC_008048.1 2590864 2591844 D integrase catalytic subunit 2590864..2591844 Sphingopyxis alaskensis RB2256 4081328 YP_617492.1 CDS Sala_2452 NC_008048.1 2591975 2592229 R hypothetical protein complement(2591975..2592229) Sphingopyxis alaskensis RB2256 4081329 YP_617493.1 CDS Sala_2453 NC_008048.1 2592230 2594527 D heavy metal translocating P-type ATPase 2592230..2594527 Sphingopyxis alaskensis RB2256 4081330 YP_617494.1 CDS Sala_2454 NC_008048.1 2594978 2596498 D aldehyde dehydrogenase 2594978..2596498 Sphingopyxis alaskensis RB2256 4081331 YP_617495.1 CDS Sala_2455 NC_008048.1 2596523 2597548 D alcohol dehydrogenase GroES-like protein 2596523..2597548 Sphingopyxis alaskensis RB2256 4081332 YP_617496.1 CDS Sala_2456 NC_008048.1 2597575 2599269 D copper-resistance protein CopA 2597575..2599269 Sphingopyxis alaskensis RB2256 4081333 YP_617497.1 CDS Sala_2457 NC_008048.1 2599266 2600237 D copper resistance B 2599266..2600237 Sphingopyxis alaskensis RB2256 4081334 YP_617498.1 CDS Sala_2458 NC_008048.1 2600495 2600761 D hypothetical protein 2600495..2600761 Sphingopyxis alaskensis RB2256 4081335 YP_617499.1 CDS Sala_2459 NC_008048.1 2600851 2602395 D PAS/PAC sensor signal transduction histidine kinase 2600851..2602395 Sphingopyxis alaskensis RB2256 4081336 YP_617500.1 CDS Sala_2460 NC_008048.1 2602385 2603017 D two component LuxR family transcriptional regulator 2602385..2603017 Sphingopyxis alaskensis RB2256 4081337 YP_617501.1 CDS Sala_2461 NC_008048.1 2603092 2603490 D response regulator receiver protein 2603092..2603490 Sphingopyxis alaskensis RB2256 4081338 YP_617502.1 CDS Sala_2462 NC_008048.1 2603481 2604551 R hypothetical protein complement(2603481..2604551) Sphingopyxis alaskensis RB2256 4081339 YP_617503.1 CDS Sala_2463 NC_008048.1 2604787 2605236 R hypothetical protein complement(2604787..2605236) Sphingopyxis alaskensis RB2256 4081301 YP_617504.1 CDS Sala_2464 NC_008048.1 2605278 2605625 R hypothetical protein complement(2605278..2605625) Sphingopyxis alaskensis RB2256 4081302 YP_617505.1 CDS Sala_2465 NC_008048.1 2605806 2606210 R hypothetical protein complement(2605806..2606210) Sphingopyxis alaskensis RB2256 4081303 YP_617506.1 CDS Sala_2466 NC_008048.1 2606197 2606910 R hypothetical protein complement(2606197..2606910) Sphingopyxis alaskensis RB2256 4081304 YP_617507.1 CDS Sala_2467 NC_008048.1 2606907 2607632 R hypothetical protein complement(2606907..2607632) Sphingopyxis alaskensis RB2256 4081305 YP_617508.1 CDS Sala_2468 NC_008048.1 2607632 2609509 R oxidoreductase FAD-binding region complement(2607632..2609509) Sphingopyxis alaskensis RB2256 4081306 YP_617509.1 CDS Sala_2469 NC_008048.1 2609538 2609897 R hypothetical protein complement(2609538..2609897) Sphingopyxis alaskensis RB2256 4081307 YP_617510.1 CDS Sala_2470 NC_008048.1 2610216 2610632 R MerR family transcriptional regulator complement(2610216..2610632) Sphingopyxis alaskensis RB2256 4081308 YP_617511.1 CDS Sala_2471 NC_008048.1 2610829 2611191 R hypothetical protein complement(2610829..2611191) Sphingopyxis alaskensis RB2256 4081309 YP_617512.1 CDS Sala_2472 NC_008048.1 2611327 2612226 R Catalyzes the formation of PRPP from ATP and ribose 5-phosphate; phosphoribosylpyrophosphate synthetase complement(2611327..2612226) Sphingopyxis alaskensis RB2256 4081310 YP_617513.1 CDS Sala_2473 NC_008048.1 2612223 2613767 R catalyzes the formation of thymine and 2-deoxy-alpha-D-ribose 1-phosphate from thymidine; thymidine phosphorylase complement(2612223..2613767) Sphingopyxis alaskensis RB2256 4081311 YP_617514.1 CDS Sala_2474 NC_008048.1 2613764 2615185 R beta-lactamase-like protein complement(2613764..2615185) Sphingopyxis alaskensis RB2256 4081312 YP_617515.1 CDS Sala_2475 NC_008048.1 2615345 2615644 R hypothetical protein complement(2615345..2615644) Sphingopyxis alaskensis RB2256 4081313 YP_617516.1 CDS Sala_2476 NC_008048.1 2615744 2615965 R hypothetical protein complement(2615744..2615965) Sphingopyxis alaskensis RB2256 4081314 YP_617517.1 CDS Sala_2477 NC_008048.1 2615962 2617143 R conjugation TrbI-like protein complement(2615962..2617143) Sphingopyxis alaskensis RB2256 4081315 YP_617518.1 CDS Sala_2478 NC_008048.1 2617173 2618024 R conjugal transfer protein TrbG/VirB9/CagX complement(2617173..2618024) Sphingopyxis alaskensis RB2256 4081316 YP_617519.1 CDS Sala_2479 NC_008048.1 2618021 2618704 R conjugal transfer protein TrbF complement(2618021..2618704) Sphingopyxis alaskensis RB2256 4081317 YP_617520.1 CDS Sala_2480 NC_008048.1 2618711 2619991 R type IV secretion VirB6 family; conjugal transfer protein TrbL complement(2618711..2619991) Sphingopyxis alaskensis RB2256 4081318 YP_617521.1 CDS Sala_2481 NC_008048.1 2619988 2620242 R hypothetical protein complement(2619988..2620242) Sphingopyxis alaskensis RB2256 4081319 YP_617522.1 CDS Sala_2482 NC_008048.1 2620244 2620963 R conjugal transfer protein TrbJ complement(2620244..2620963) Sphingopyxis alaskensis RB2256 4081320 YP_617523.1 CDS Sala_2483 NC_008048.1 2620969 2623413 R type IV secretion system VirB4 family; conjugal transfer ATPase TrbE complement(2620969..2623413) Sphingopyxis alaskensis RB2256 4081359 YP_617524.1 CDS Sala_2484 NC_008048.1 2623679 2624011 R conjugal transfer protein TrbC complement(2623679..2624011) Sphingopyxis alaskensis RB2256 4081360 YP_617525.1 CDS Sala_2485 NC_008048.1 2624008 2624991 R type II secretion system protein E complement(2624008..2624991) Sphingopyxis alaskensis RB2256 4081361 YP_617526.1 CDS Sala_2486 NC_008048.1 2625126 2625701 D LuxR family transcriptional regulator 2625126..2625701 Sphingopyxis alaskensis RB2256 4081362 YP_617527.1 CDS Sala_2487 NC_008048.1 2625761 2626093 D hypothetical protein 2625761..2626093 Sphingopyxis alaskensis RB2256 4081363 YP_617528.1 CDS Sala_2488 NC_008048.1 2626482 2627546 D DNA repair protein RadC 2626482..2627546 Sphingopyxis alaskensis RB2256 4081364 YP_617529.1 CDS Sala_2489 NC_008048.1 2627631 2630441 R TrwC protein complement(2627631..2630441) Sphingopyxis alaskensis RB2256 4081365 YP_617530.1 CDS Sala_2490 NC_008048.1 2630441 2632330 R Type IV secretory pathway VirD4 components-like protein complement(2630441..2632330) Sphingopyxis alaskensis RB2256 4081366 YP_617531.1 CDS Sala_2491 NC_008048.1 2632330 2632827 R hypothetical protein complement(2632330..2632827) Sphingopyxis alaskensis RB2256 4081367 YP_617532.1 CDS Sala_2492 NC_008048.1 2633048 2633776 R lytic transglycosylase, catalytic complement(2633048..2633776) Sphingopyxis alaskensis RB2256 4081368 YP_617533.1 CDS Sala_2493 NC_008048.1 2633773 2634363 R conjugal transfer protein traF complement(2633773..2634363) Sphingopyxis alaskensis RB2256 4081369 YP_617534.1 CDS Sala_2494 NC_008048.1 2634360 2634905 R hypothetical protein complement(2634360..2634905) Sphingopyxis alaskensis RB2256 4081370 YP_617535.1 CDS Sala_2495 NC_008048.1 2634905 2635147 R putative transcriptional regulator complement(2634905..2635147) Sphingopyxis alaskensis RB2256 4081371 YP_617536.1 CDS Sala_2496 NC_008048.1 2635250 2635759 R hypothetical protein complement(2635250..2635759) Sphingopyxis alaskensis RB2256 4081372 YP_617537.1 CDS Sala_2497 NC_008048.1 2636150 2636464 R hypothetical protein complement(2636150..2636464) Sphingopyxis alaskensis RB2256 4081373 YP_617538.1 CDS Sala_2498 NC_008048.1 2636775 2637245 R hypothetical protein complement(2636775..2637245) Sphingopyxis alaskensis RB2256 4081374 YP_617539.1 CDS Sala_2499 NC_008048.1 2637330 2637572 R hypothetical protein complement(2637330..2637572) Sphingopyxis alaskensis RB2256 4081375 YP_617540.1 CDS Sala_2500 NC_008048.1 2637612 2637914 R hypothetical protein complement(2637612..2637914) Sphingopyxis alaskensis RB2256 4081376 YP_617541.1 CDS Sala_2501 NC_008048.1 2637963 2638283 R hypothetical protein complement(2637963..2638283) Sphingopyxis alaskensis RB2256 4081377 YP_617542.1 CDS Sala_2502 NC_008048.1 2638892 2639146 R hypothetical protein complement(2638892..2639146) Sphingopyxis alaskensis RB2256 4081613 YP_617543.1 CDS Sala_2503 NC_008048.1 2639246 2639809 R hypothetical protein complement(2639246..2639809) Sphingopyxis alaskensis RB2256 4081614 YP_617544.1 CDS Sala_2504 NC_008048.1 2639870 2640478 R hypothetical protein complement(2639870..2640478) Sphingopyxis alaskensis RB2256 4081615 YP_617545.1 CDS Sala_2505 NC_008048.1 2640552 2642795 R TonB-dependent receptor complement(2640552..2642795) Sphingopyxis alaskensis RB2256 4081616 YP_617546.1 CDS Sala_2506 NC_008048.1 2642893 2644206 R hypothetical protein complement(2642893..2644206) Sphingopyxis alaskensis RB2256 4081617 YP_617547.1 CDS Sala_2507 NC_008048.1 2644203 2644952 R GntR family transcriptional regulator complement(2644203..2644952) Sphingopyxis alaskensis RB2256 4081618 YP_617548.1 CDS Sala_2508 NC_008048.1 2645077 2646087 D beta-lactamase 2645077..2646087 Sphingopyxis alaskensis RB2256 4081619 YP_617549.1 CDS Sala_2509 NC_008048.1 2646202 2646657 R MerR family transcriptional regulator complement(2646202..2646657) Sphingopyxis alaskensis RB2256 4081620 YP_617550.1 CDS Sala_2510 NC_008048.1 2646732 2647103 D mercuric transporter MerT 2646732..2647103 Sphingopyxis alaskensis RB2256 4081621 YP_617551.1 CDS Sala_2511 NC_008048.1 2647100 2647399 D mercuric transport protein periplasmic protein 2647100..2647399 Sphingopyxis alaskensis RB2256 4081622 YP_617552.1 CDS Sala_2512 NC_008048.1 2647410 2648849 D mercuric reductase MerA 2647410..2648849 Sphingopyxis alaskensis RB2256 4081623 YP_617553.1 CDS Sala_2513 NC_008048.1 2648883 2649299 D hypothetical protein 2648883..2649299 Sphingopyxis alaskensis RB2256 4081624 YP_617554.1 CDS Sala_2514 NC_008048.1 2649428 2650342 R Abi family protein complement(2649428..2650342) Sphingopyxis alaskensis RB2256 4081625 YP_617555.1 CDS Sala_2515 NC_008048.1 2650569 2651495 R similar to SMa10599; hypothetical protein complement(2650569..2651495) Sphingopyxis alaskensis RB2256 4081626 YP_617556.1 CDS Sala_2516 NC_008048.1 2651561 2652502 R hypothetical protein complement(2651561..2652502) Sphingopyxis alaskensis RB2256 4081627 YP_617557.1 CDS Sala_2517 NC_008048.1 2652821 2653873 R hypothetical protein complement(2652821..2653873) Sphingopyxis alaskensis RB2256 4081628 YP_617558.1 CDS Sala_2518 NC_008048.1 2654126 2655091 R hypothetical protein complement(2654126..2655091) Sphingopyxis alaskensis RB2256 4081629 YP_617559.1 CDS Sala_2519 NC_008048.1 2655095 2656693 R hypothetical protein complement(2655095..2656693) Sphingopyxis alaskensis RB2256 4081630 YP_617560.1 CDS Sala_2520 NC_008048.1 2656915 2658999 R ParB-like nuclease complement(2656915..2658999) Sphingopyxis alaskensis RB2256 4081631 YP_617561.1 CDS Sala_2521 NC_008048.1 2659123 2659734 R hypothetical protein complement(2659123..2659734) Sphingopyxis alaskensis RB2256 4081632 YP_617562.1 CDS Sala_2522 NC_008048.1 2659736 2659954 D hypothetical protein 2659736..2659954 Sphingopyxis alaskensis RB2256 4081496 YP_617563.1 CDS Sala_2523 NC_008048.1 2660297 2660806 D hypothetical protein 2660297..2660806 Sphingopyxis alaskensis RB2256 4081497 YP_617564.1 CDS Sala_2524 NC_008048.1 2660821 2661471 D hypothetical protein 2660821..2661471 Sphingopyxis alaskensis RB2256 4081498 YP_617565.1 CDS Sala_2525 NC_008048.1 2661658 2662488 D LuxR family transcriptional regulator 2661658..2662488 Sphingopyxis alaskensis RB2256 4081499 YP_617566.1 CDS Sala_2526 NC_008048.1 2662586 2663212 D autoinducer synthesis protein 2662586..2663212 Sphingopyxis alaskensis RB2256 4081500 YP_617567.1 CDS Sala_2527 NC_008048.1 2663209 2664087 D phytanoyl-CoA dioxygenase 2663209..2664087 Sphingopyxis alaskensis RB2256 4081501 YP_617568.1 CDS Sala_2528 NC_008048.1 2664084 2664695 D regulatory protein GntR 2664084..2664695 Sphingopyxis alaskensis RB2256 4081502 YP_617569.1 CDS Sala_2529 NC_008048.1 2664950 2665558 D ECF subfamily RNA polymerase sigma-24 factor 2664950..2665558 Sphingopyxis alaskensis RB2256 4081503 YP_617570.1 CDS Sala_2530 NC_008048.1 2665555 2666544 D putative FecR protein 2665555..2666544 Sphingopyxis alaskensis RB2256 4081504 YP_617571.1 CDS Sala_2531 NC_008048.1 2666644 2669175 D TonB-dependent receptor 2666644..2669175 Sphingopyxis alaskensis RB2256 4081505 YP_617572.1 CDS Sala_2532 NC_008048.1 2669187 2671367 D dipeptidyl aminopeptidases/acylaminoacyl-peptidases-like protein 2669187..2671367 Sphingopyxis alaskensis RB2256 4081506 YP_617573.1 CDS Sala_2533 NC_008048.1 2671577 2673289 R asparagine synthase complement(2671577..2673289) Sphingopyxis alaskensis RB2256 4081507 YP_617574.1 CDS Sala_2534 NC_008048.1 2673289 2673951 R hypothetical protein complement(2673289..2673951) Sphingopyxis alaskensis RB2256 4081508 YP_617575.1 CDS Sala_2535 NC_008048.1 2674866 2676257 D phage integrase 2674866..2676257 Sphingopyxis alaskensis RB2256 4081509 YP_617576.1 CDS Sala_2537 NC_008048.1 2677602 2678345 R NADPH-dependent FMN reductase complement(2677602..2678345) Sphingopyxis alaskensis RB2256 4081511 YP_617577.1 CDS Sala_2538 NC_008048.1 2678373 2679464 R bile acid:sodium symporter complement(2678373..2679464) Sphingopyxis alaskensis RB2256 4081512 YP_617578.1 CDS Sala_2539 NC_008048.1 2679461 2679892 R arsenate reductase complement(2679461..2679892) Sphingopyxis alaskensis RB2256 4081513 YP_617579.1 CDS Sala_2540 NC_008048.1 2679889 2680428 R protein tyrosine phosphatase complement(2679889..2680428) Sphingopyxis alaskensis RB2256 4081514 YP_617580.1 CDS Sala_2541 NC_008048.1 2680425 2680778 R ArsR family transcriptional regulator complement(2680425..2680778) Sphingopyxis alaskensis RB2256 4081456 YP_617581.1 CDS Sala_2542 NC_008048.1 2681319 2681639 R hypothetical protein complement(2681319..2681639) Sphingopyxis alaskensis RB2256 4081457 YP_617582.1 CDS Sala_2543 NC_008048.1 2681659 2682045 R MerR family transcriptional regulator complement(2681659..2682045) Sphingopyxis alaskensis RB2256 4081458 YP_617583.1 CDS Sala_2544 NC_008048.1 2682042 2684405 R heavy metal translocating P-type ATPase complement(2682042..2684405) Sphingopyxis alaskensis RB2256 4081459 YP_617584.1 CDS Sala_2545 NC_008048.1 2684575 2685075 D hypothetical protein 2684575..2685075 Sphingopyxis alaskensis RB2256 4081460 YP_617585.1 CDS Sala_2546 NC_008048.1 2685117 2685479 D hypothetical protein 2685117..2685479 Sphingopyxis alaskensis RB2256 4081461 YP_617586.1 CDS Sala_2547 NC_008048.1 2685583 2685858 D hypothetical protein 2685583..2685858 Sphingopyxis alaskensis RB2256 4081462 YP_617587.1 CDS Sala_2548 NC_008048.1 2685998 2687224 D outer membrane efflux protein 2685998..2687224 Sphingopyxis alaskensis RB2256 4081463 YP_617588.1 CDS Sala_2549 NC_008048.1 2687221 2688693 D secretion protein HlyD 2687221..2688693 Sphingopyxis alaskensis RB2256 4081464 YP_617589.1 CDS Sala_2550 NC_008048.1 2688690 2691833 D heavy metal efflux pump CzcA 2688690..2691833 Sphingopyxis alaskensis RB2256 4081465 YP_617590.1 CDS Sala_2551 NC_008048.1 2691845 2692255 D hypothetical protein 2691845..2692255 Sphingopyxis alaskensis RB2256 4081466 YP_617591.1 CDS Sala_2552 NC_008048.1 2692390 2692722 R hypothetical protein complement(2692390..2692722) Sphingopyxis alaskensis RB2256 4081467 YP_617592.1 CDS Sala_2553 NC_008048.1 2692826 2693254 R hypothetical protein complement(2692826..2693254) Sphingopyxis alaskensis RB2256 4081468 YP_617593.1 CDS Sala_2554 NC_008048.1 2693565 2693768 D hypothetical protein 2693565..2693768 Sphingopyxis alaskensis RB2256 4081469 YP_617594.1 CDS Sala_2555 NC_008048.1 2693795 2696383 D vitamin K epoxide reductase 2693795..2696383 Sphingopyxis alaskensis RB2256 4081470 YP_617595.1 CDS Sala_2556 NC_008048.1 2696453 2697739 D fatty acid alpha hydroxylase, cytochrome P450 2696453..2697739 Sphingopyxis alaskensis RB2256 4081471 YP_617596.1 CDS Sala_2557 NC_008048.1 2697807 2698352 R hypothetical protein complement(2697807..2698352) Sphingopyxis alaskensis RB2256 4081472 YP_617597.1 CDS Sala_2558 NC_008048.1 2698368 2698787 R MerR family transcriptional regulator complement(2698368..2698787) Sphingopyxis alaskensis RB2256 4081473 YP_617598.1 CDS Sala_2559 NC_008048.1 2698830 2699516 D type 11 methyltransferase 2698830..2699516 Sphingopyxis alaskensis RB2256 4081474 YP_617599.1 CDS Sala_2560 NC_008048.1 2699576 2700220 D hypothetical protein 2699576..2700220 Sphingopyxis alaskensis RB2256 4081475 YP_617600.1 CDS Sala_2561 NC_008048.1 2700238 2702181 D iron permease FTR1 2700238..2702181 Sphingopyxis alaskensis RB2256 4081594 YP_617601.1 CDS Sala_2562 NC_008048.1 2702209 2702616 R MerR family transcriptional regulator complement(2702209..2702616) Sphingopyxis alaskensis RB2256 4081595 YP_617602.1 CDS Sala_2563 NC_008048.1 2702699 2703064 D mercuric ion transport protein, MerT 2702699..2703064 Sphingopyxis alaskensis RB2256 4081596 YP_617603.1 CDS Sala_2564 NC_008048.1 2703483 2704052 R universal stress protein, UspA complement(2703483..2704052) Sphingopyxis alaskensis RB2256 4081597 YP_617604.1 CDS Sala_2565 NC_008048.1 2704061 2704393 D hypothetical protein 2704061..2704393 Sphingopyxis alaskensis RB2256 4081598 YP_617605.1 CDS Sala_2566 NC_008048.1 2704556 2704936 D hypothetical protein 2704556..2704936 Sphingopyxis alaskensis RB2256 4081599 YP_617606.1 CDS Sala_2567 NC_008048.1 2704996 2706297 D outer membrane efflux protein 2704996..2706297 Sphingopyxis alaskensis RB2256 4081600 YP_617607.1 CDS Sala_2568 NC_008048.1 2706300 2707469 D secretion protein HlyD 2706300..2707469 Sphingopyxis alaskensis RB2256 4081601 YP_617608.1 CDS Sala_2569 NC_008048.1 2707471 2710707 D heavy metal efflux pump CzcA 2707471..2710707 Sphingopyxis alaskensis RB2256 4081602 YP_617609.1 CDS Sala_2570 NC_008048.1 2710933 2711856 D hypothetical protein 2710933..2711856 Sphingopyxis alaskensis RB2256 4081603 YP_617610.1 CDS Sala_2571 NC_008048.1 2711883 2712626 R HAD family hydrolase complement(2711883..2712626) Sphingopyxis alaskensis RB2256 4081604 YP_617611.1 CDS Sala_2572 NC_008048.1 2712672 2713097 R MerR family transcriptional regulator complement(2712672..2713097) Sphingopyxis alaskensis RB2256 4081605 YP_617612.1 CDS Sala_2573 NC_008048.1 2713165 2713815 D cation efflux protein 2713165..2713815 Sphingopyxis alaskensis RB2256 4081606 YP_617613.1 CDS Sala_2574 NC_008048.1 2713981 2714784 R hypothetical protein complement(2713981..2714784) Sphingopyxis alaskensis RB2256 4081607 YP_617614.1 CDS Sala_2575 NC_008048.1 2715028 2715654 R cation efflux protein complement(2715028..2715654) Sphingopyxis alaskensis RB2256 4081608 YP_617615.1 CDS Sala_2576 NC_008048.1 2716403 2716738 D hypothetical protein 2716403..2716738 Sphingopyxis alaskensis RB2256 4081609 YP_617616.1 CDS Sala_2577 NC_008048.1 2716802 2718109 D outer membrane efflux protein 2716802..2718109 Sphingopyxis alaskensis RB2256 4081610 YP_617617.1 CDS Sala_2578 NC_008048.1 2718261 2719418 D secretion protein HlyD 2718261..2719418 Sphingopyxis alaskensis RB2256 4081611 YP_617618.1 CDS Sala_2579 NC_008048.1 2719422 2722667 D heavy metal efflux pump CzcA 2719422..2722667 Sphingopyxis alaskensis RB2256 4081612 YP_617619.1 CDS Sala_2580 NC_008048.1 2722679 2723023 D hypothetical protein 2722679..2723023 Sphingopyxis alaskensis RB2256 4081633 YP_617620.1 CDS Sala_2581 NC_008048.1 2723156 2723623 D hypothetical protein 2723156..2723623 Sphingopyxis alaskensis RB2256 4081634 YP_617621.1 CDS Sala_2582 NC_008048.1 2723815 2726307 D heavy metal translocating P-type ATPase 2723815..2726307 Sphingopyxis alaskensis RB2256 4081635 YP_617622.1 CDS Sala_2583 NC_008048.1 2726304 2727797 D Type I secretion outer membrane protein, TolC 2726304..2727797 Sphingopyxis alaskensis RB2256 4081636 YP_617623.1 CDS Sala_2584 NC_008048.1 2728043 2728981 D cation diffusion facilitator family transporter 2728043..2728981 Sphingopyxis alaskensis RB2256 4081637 YP_617624.1 CDS Sala_2585 NC_008048.1 2729044 2729340 D hypothetical protein 2729044..2729340 Sphingopyxis alaskensis RB2256 4081638 YP_617625.1 CDS Sala_2586 NC_008048.1 2729377 2729862 D hypothetical protein 2729377..2729862 Sphingopyxis alaskensis RB2256 4081639 YP_617626.1 CDS Sala_2587 NC_008048.1 2729875 2730453 D hypothetical protein 2729875..2730453 Sphingopyxis alaskensis RB2256 4081640 YP_617627.1 CDS Sala_2588 NC_008048.1 2731109 2731861 D LuxR family transcriptional regulator 2731109..2731861 Sphingopyxis alaskensis RB2256 4081641 YP_617628.1 CDS Sala_2589 NC_008048.1 2731970 2732596 D autoinducer synthesis protein 2731970..2732596 Sphingopyxis alaskensis RB2256 4081642 YP_617629.1 CDS Sala_2590 NC_008048.1 2732593 2733468 D phytanoyl-CoA dioxygenase 2732593..2733468 Sphingopyxis alaskensis RB2256 4081643 YP_617630.1 CDS Sala_2591 NC_008048.1 2733473 2734087 D GntR family transcriptional regulator 2733473..2734087 Sphingopyxis alaskensis RB2256 4081644 YP_617631.1 CDS Sala_2592 NC_008048.1 2734080 2734379 D hypothetical protein 2734080..2734379 Sphingopyxis alaskensis RB2256 4081645 YP_617632.1 CDS Sala_2593 NC_008048.1 2734387 2734776 R PilT protein-like protein complement(2734387..2734776) Sphingopyxis alaskensis RB2256 4081646 YP_617633.1 CDS Sala_2594 NC_008048.1 2734773 2735018 R AbrB family transcriptional regulator complement(2734773..2735018) Sphingopyxis alaskensis RB2256 4081647 YP_617634.1 CDS Sala_2595 NC_008048.1 2735177 2736109 D similar to SMa10599; hypothetical protein 2735177..2736109 Sphingopyxis alaskensis RB2256 4081648 YP_617635.1 CDS Sala_2596 NC_008048.1 2736394 2736627 D SpoVT/AbrB-like protein 2736394..2736627 Sphingopyxis alaskensis RB2256 4081649 YP_617636.1 CDS Sala_2597 NC_008048.1 2736631 2737032 D PilT protein-like protein 2736631..2737032 Sphingopyxis alaskensis RB2256 4081650 YP_617637.1 CDS Sala_2598 NC_008048.1 2737321 2737926 D ECF subfamily RNA polymerase sigma-24 factor 2737321..2737926 Sphingopyxis alaskensis RB2256 4081651 YP_617638.1 CDS Sala_2599 NC_008048.1 2737923 2739020 D putative FecR protein 2737923..2739020 Sphingopyxis alaskensis RB2256 4081652 YP_617639.1 CDS Sala_2600 NC_008048.1 2739135 2741705 D TonB-dependent receptor 2739135..2741705 Sphingopyxis alaskensis RB2256 4081653 YP_617640.1 CDS Sala_2601 NC_008048.1 2741705 2743831 D dipeptidyl aminopeptidases/acylaminoacyl-peptidases-like protein 2741705..2743831 Sphingopyxis alaskensis RB2256 4081654 YP_617641.1 CDS Sala_2602 NC_008048.1 2743790 2745553 R asparagine synthase complement(2743790..2745553) Sphingopyxis alaskensis RB2256 4081655 YP_617642.1 CDS Sala_2603 NC_008048.1 2745550 2746209 R hypothetical protein complement(2745550..2746209) Sphingopyxis alaskensis RB2256 4081656 YP_617643.1 CDS Sala_2604 NC_008048.1 2746688 2746924 R hypothetical protein complement(2746688..2746924) Sphingopyxis alaskensis RB2256 4081657 YP_617644.1 CDS Sala_2605 NC_008048.1 2746924 2748216 R conjugation TrbI-like protein complement(2746924..2748216) Sphingopyxis alaskensis RB2256 4081658 YP_617645.1 CDS Sala_2606 NC_008048.1 2748213 2749226 R conjugal transfer protein TrbG/VirB9/CagX complement(2748213..2749226) Sphingopyxis alaskensis RB2256 4081659 YP_617646.1 CDS Sala_2607 NC_008048.1 2749223 2749906 R conjugal transfer protein TrbF complement(2749223..2749906) Sphingopyxis alaskensis RB2256 4081660 YP_617647.1 CDS Sala_2608 NC_008048.1 2749925 2751298 R type IV secretion VirB6 family; conjugal transfer protein TrbL complement(2749925..2751298) Sphingopyxis alaskensis RB2256 4081661 YP_617648.1 CDS Sala_2609 NC_008048.1 2751295 2751543 R hypothetical protein complement(2751295..2751543) Sphingopyxis alaskensis RB2256 4081662 YP_617649.1 CDS Sala_2610 NC_008048.1 2751545 2752267 R conjugal transfer protein TrbJ complement(2751545..2752267) Sphingopyxis alaskensis RB2256 4081663 YP_617650.1 CDS Sala_2611 NC_008048.1 2752264 2754753 R type IV secretion system VirB4 family; conjugal transfer ATPase TrbE complement(2752264..2754753) Sphingopyxis alaskensis RB2256 4081664 YP_617651.1 CDS Sala_2612 NC_008048.1 2754750 2755019 R putative conjugal transfer protein complement(2754750..2755019) Sphingopyxis alaskensis RB2256 4081665 YP_617652.1 CDS Sala_2613 NC_008048.1 2755019 2755363 R conjugal transfer protein TrbC complement(2755019..2755363) Sphingopyxis alaskensis RB2256 4081666 YP_617653.1 CDS Sala_2614 NC_008048.1 2755360 2756343 R type II secretion system protein E complement(2755360..2756343) Sphingopyxis alaskensis RB2256 4081667 YP_617654.1 CDS Sala_2615 NC_008048.1 2756368 2756685 R hypothetical protein complement(2756368..2756685) Sphingopyxis alaskensis RB2256 4081668 YP_617655.1 CDS Sala_2616 NC_008048.1 2756756 2757862 D filamentation induced by cAMP protein fic 2756756..2757862 Sphingopyxis alaskensis RB2256 4081669 YP_617656.1 CDS Sala_2617 NC_008048.1 2757835 2758287 R hypothetical protein complement(2757835..2758287) Sphingopyxis alaskensis RB2256 4081670 YP_617657.1 CDS Sala_2618 NC_008048.1 2758284 2760347 R type IV secretion VirD4 coupling protein family; conjugal transfer coupling protein TraG complement(2758284..2760347) Sphingopyxis alaskensis RB2256 4081671 YP_617658.1 CDS Sala_2619 NC_008048.1 2760382 2762127 R hypothetical protein complement(2760382..2762127) Sphingopyxis alaskensis RB2256 4081574 YP_617659.1 CDS Sala_2620 NC_008048.1 2762372 2763160 R lytic transglycosylase, catalytic complement(2762372..2763160) Sphingopyxis alaskensis RB2256 4081575 YP_617660.1 CDS Sala_2621 NC_008048.1 2763164 2763508 R hypothetical protein complement(2763164..2763508) Sphingopyxis alaskensis RB2256 4081576 YP_617661.1 CDS Sala_2622 NC_008048.1 2763499 2764098 R conjugal transfer protein traF complement(2763499..2764098) Sphingopyxis alaskensis RB2256 4081577 YP_617662.1 CDS Sala_2623 NC_008048.1 2764095 2764613 R hypothetical protein complement(2764095..2764613) Sphingopyxis alaskensis RB2256 4081578 YP_617663.1 CDS Sala_2624 NC_008048.1 2764891 2765775 R putative replication protein A complement(2764891..2765775) Sphingopyxis alaskensis RB2256 4081579 YP_617664.1 CDS Sala_2625 NC_008048.1 2765780 2766040 R hypothetical protein complement(2765780..2766040) Sphingopyxis alaskensis RB2256 4081580 YP_617665.1 CDS Sala_2626 NC_008048.1 2766168 2766512 R hypothetical protein complement(2766168..2766512) Sphingopyxis alaskensis RB2256 4081581 YP_617666.1 CDS Sala_2627 NC_008048.1 2766607 2767050 D hypothetical protein 2766607..2767050 Sphingopyxis alaskensis RB2256 4081582 YP_617667.1 CDS Sala_2628 NC_008048.1 2767074 2767391 R hypothetical protein complement(2767074..2767391) Sphingopyxis alaskensis RB2256 4081583 YP_617668.1 CDS Sala_2629 NC_008048.1 2767636 2767893 D hypothetical protein 2767636..2767893 Sphingopyxis alaskensis RB2256 4081584 YP_617669.1 CDS Sala_2630 NC_008048.1 2767976 2768428 R hypothetical protein complement(2767976..2768428) Sphingopyxis alaskensis RB2256 4081585 YP_617670.1 CDS Sala_2631 NC_008048.1 2768573 2768737 R hypothetical protein complement(2768573..2768737) Sphingopyxis alaskensis RB2256 4081586 YP_617671.1 CDS Sala_2632 NC_008048.1 2769166 2769441 D histone-like DNA-binding protein 2769166..2769441 Sphingopyxis alaskensis RB2256 4081587 YP_617672.1 CDS Sala_2633 NC_008048.1 2769535 2769855 R hypothetical protein complement(2769535..2769855) Sphingopyxis alaskensis RB2256 4081588 YP_617673.1 CDS Sala_2635 NC_008048.1 2770462 2772600 R hypothetical protein complement(2770462..2772600) Sphingopyxis alaskensis RB2256 4081589 YP_617674.1 CDS Sala_2636 NC_008048.1 2772597 2773124 R hypothetical protein complement(2772597..2773124) Sphingopyxis alaskensis RB2256 4081590 YP_617675.1 CDS Sala_2637 NC_008048.1 2773124 2777710 R helicase-like protein complement(2773124..2777710) Sphingopyxis alaskensis RB2256 4081591 YP_617676.1 CDS Sala_2638 NC_008048.1 2777719 2778432 R hypothetical protein complement(2777719..2778432) Sphingopyxis alaskensis RB2256 4081592 YP_617677.1 CDS Sala_2639 NC_008048.1 2778422 2781463 R hypothetical protein complement(2778422..2781463) Sphingopyxis alaskensis RB2256 4081593 YP_617678.1 CDS Sala_2640 NC_008048.1 2781460 2782377 R hypothetical protein complement(2781460..2782377) Sphingopyxis alaskensis RB2256 4081770 YP_617679.1 CDS Sala_2641 NC_008048.1 2782374 2784869 R helicase-like protein complement(2782374..2784869) Sphingopyxis alaskensis RB2256 4081771 YP_617680.1 CDS Sala_2642 NC_008048.1 2784862 2787996 R type III restriction enzyme, res subunit complement(2784862..2787996) Sphingopyxis alaskensis RB2256 4081772 YP_617681.1 CDS Sala_2643 NC_008048.1 2788101 2788811 R ExsB protein complement(2788101..2788811) Sphingopyxis alaskensis RB2256 4081773 YP_617682.1 CDS Sala_2644 NC_008048.1 2788808 2789182 R putative 6-pyruvoyl tetrahydropterin synthase complement(2788808..2789182) Sphingopyxis alaskensis RB2256 4081774 YP_617683.1 CDS Sala_2645 NC_008048.1 2789182 2789814 R hypothetical protein complement(2789182..2789814) Sphingopyxis alaskensis RB2256 4081775 YP_617684.1 CDS Sala_2646 NC_008048.1 2789811 2790854 R hypothetical protein complement(2789811..2790854) Sphingopyxis alaskensis RB2256 4081776 YP_617685.1 CDS Sala_2647 NC_008048.1 2790862 2792193 R hypothetical protein complement(2790862..2792193) Sphingopyxis alaskensis RB2256 4081777 YP_617686.1 CDS Sala_2648 NC_008048.1 2792190 2793311 R hypothetical protein complement(2792190..2793311) Sphingopyxis alaskensis RB2256 4081778 YP_617687.1 CDS Sala_2649 NC_008048.1 2793308 2794231 R hypothetical protein complement(2793308..2794231) Sphingopyxis alaskensis RB2256 4081779 YP_617688.1 CDS Sala_2650 NC_008048.1 2794602 2795534 R hypothetical protein complement(2794602..2795534) Sphingopyxis alaskensis RB2256 4081780 YP_617689.1 CDS Sala_2651 NC_008048.1 2795849 2796895 R hypothetical protein complement(2795849..2796895) Sphingopyxis alaskensis RB2256 4081781 YP_617690.1 CDS Sala_2652 NC_008048.1 2796907 2801097 R methylase/helicase complement(2796907..2801097) Sphingopyxis alaskensis RB2256 4081782 YP_617691.1 CDS Sala_2653 NC_008048.1 2801727 2802506 D hypothetical protein 2801727..2802506 Sphingopyxis alaskensis RB2256 4081783 YP_617692.1 CDS Sala_2654 NC_008048.1 2802544 2802759 R hypothetical protein complement(2802544..2802759) Sphingopyxis alaskensis RB2256 4081784 YP_617693.1 CDS Sala_2655 NC_008048.1 2802746 2803267 R hypothetical protein complement(2802746..2803267) Sphingopyxis alaskensis RB2256 4081785 YP_617694.1 CDS Sala_2656 NC_008048.1 2803348 2803713 R hypothetical protein complement(2803348..2803713) Sphingopyxis alaskensis RB2256 4081786 YP_617695.1 CDS Sala_2657 NC_008048.1 2803724 2804191 R hypothetical protein complement(2803724..2804191) Sphingopyxis alaskensis RB2256 4081787 YP_617696.1 CDS Sala_2658 NC_008048.1 2804276 2804596 R hypothetical protein complement(2804276..2804596) Sphingopyxis alaskensis RB2256 4081788 YP_617697.1 CDS Sala_2659 NC_008048.1 2804571 2806712 R hypothetical protein complement(2804571..2806712) Sphingopyxis alaskensis RB2256 4081866 YP_617698.1 CDS Sala_2660 NC_008048.1 2806724 2807086 D hypothetical protein 2806724..2807086 Sphingopyxis alaskensis RB2256 4081867 YP_617699.1 CDS Sala_2661 NC_008048.1 2807396 2807653 D hypothetical protein 2807396..2807653 Sphingopyxis alaskensis RB2256 4081868 YP_617700.1 CDS Sala_2662 NC_008048.1 2807655 2807969 D plasmid stabilization system protein 2807655..2807969 Sphingopyxis alaskensis RB2256 4081869 YP_617701.1 CDS Sala_2663 NC_008048.1 2807992 2808399 R hypothetical protein complement(2807992..2808399) Sphingopyxis alaskensis RB2256 4081870 YP_617702.1 CDS Sala_2664 NC_008048.1 2808396 2809298 R replication primase complement(2808396..2809298) Sphingopyxis alaskensis RB2256 4081871 YP_617703.1 CDS Sala_2665 NC_008048.1 2809881 2810792 D thioredoxin-like protein 2809881..2810792 Sphingopyxis alaskensis RB2256 4081873 YP_617704.1 CDS Sala_2666 NC_008048.1 2810792 2811442 D peptidase S16, lon-like protein 2810792..2811442 Sphingopyxis alaskensis RB2256 4081874 YP_617705.1 CDS Sala_2667 NC_008048.1 2811450 2812139 R sigma-70 region 2 complement(2811450..2812139) Sphingopyxis alaskensis RB2256 4081875 YP_617706.1 CDS Sala_2668 NC_008048.1 2812292 2813533 R UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase complement(2812292..2813533) Sphingopyxis alaskensis RB2256 4081876 YP_617707.1 CDS Sala_2669 NC_008048.1 2813594 2815972 D cell division protein FtsK 2813594..2815972 Sphingopyxis alaskensis RB2256 4081877 YP_617708.1 CDS Sala_2670 NC_008048.1 2816158 2816778 D outer membrane lipoprotein carrier protein LolA 2816158..2816778 Sphingopyxis alaskensis RB2256 4081878 YP_617709.1 CDS Sala_2671 NC_008048.1 2817401 2818195 D exodeoxyribonuclease III (xth) 2817401..2818195 Sphingopyxis alaskensis RB2256 4081879 YP_617710.1 CDS Sala_2672 NC_008048.1 2818357 2819259 D GTP cyclohydrolase II 2818357..2819259 Sphingopyxis alaskensis RB2256 4081880 YP_617711.1 CDS Sala_2673 NC_008048.1 2819348 2820154 R response regulator receiver protein complement(2819348..2820154) Sphingopyxis alaskensis RB2256 4081881 YP_617712.1 CDS Sala_2674 NC_008048.1 2820151 2821275 R signal transduction histidine kinase LytS complement(2820151..2821275) Sphingopyxis alaskensis RB2256 4081882 YP_617713.1 CDS Sala_2675 NC_008048.1 2821340 2821858 R HxlR family transcriptional regulator complement(2821340..2821858) Sphingopyxis alaskensis RB2256 4081883 YP_617714.1 CDS Sala_2676 NC_008048.1 2821944 2822828 R glycosyl transferase family protein complement(2821944..2822828) Sphingopyxis alaskensis RB2256 4081884 YP_617715.1 CDS Sala_2677 NC_008048.1 2822946 2825048 D (p)ppGpp synthetase I SpoT/RelA 2822946..2825048 Sphingopyxis alaskensis RB2256 4081828 YP_617716.1 CDS Sala_2678 NC_008048.1 2825279 2825533 D hypothetical protein 2825279..2825533 Sphingopyxis alaskensis RB2256 4081829 YP_617717.1 CDS Sala_2679 NC_008048.1 2825537 2826007 D DoxX protein 2825537..2826007 Sphingopyxis alaskensis RB2256 4081830 YP_617718.1 CDS Sala_2680 NC_008048.1 2826004 2826528 D ECF subfamily RNA polymerase sigma-24 factor 2826004..2826528 Sphingopyxis alaskensis RB2256 4081831 YP_617719.1 CDS Sala_2681 NC_008048.1 2826533 2827177 D hypothetical protein 2826533..2827177 Sphingopyxis alaskensis RB2256 4081832 YP_617720.1 CDS Sala_2682 NC_008048.1 2827254 2827637 D hypothetical protein 2827254..2827637 Sphingopyxis alaskensis RB2256 4081833 YP_617721.1 CDS Sala_2683 NC_008048.1 2827775 2829202 R mercuric reductase MerA complement(2827775..2829202) Sphingopyxis alaskensis RB2256 4081834 YP_617722.1 CDS Sala_2684 NC_008048.1 2829245 2829574 R heavy metal transport/detoxification protein complement(2829245..2829574) Sphingopyxis alaskensis RB2256 4081835 YP_617723.1 CDS Sala_2685 NC_008048.1 2829586 2829984 R mercuric transporter MerT complement(2829586..2829984) Sphingopyxis alaskensis RB2256 4081836 YP_617724.1 CDS Sala_2686 NC_008048.1 2830060 2830578 D MerR family transcriptional regulator 2830060..2830578 Sphingopyxis alaskensis RB2256 4081837 YP_617725.1 CDS Sala_2687 NC_008048.1 2830502 2831257 R hypothetical protein complement(2830502..2831257) Sphingopyxis alaskensis RB2256 4081838 YP_617726.1 CDS Sala_2688 NC_008048.1 2831261 2831716 R hypothetical protein complement(2831261..2831716) Sphingopyxis alaskensis RB2256 4081839 YP_617727.1 CDS Sala_2689 NC_008048.1 2831868 2832518 R hypothetical protein complement(2831868..2832518) Sphingopyxis alaskensis RB2256 4081840 YP_617728.1 CDS Sala_2690 NC_008048.1 2832574 2833362 D hypothetical protein 2832574..2833362 Sphingopyxis alaskensis RB2256 4081841 YP_617729.1 CDS Sala_2691 NC_008048.1 2833594 2834298 D hypothetical protein 2833594..2834298 Sphingopyxis alaskensis RB2256 4081842 YP_617730.1 CDS Sala_2692 NC_008048.1 2834379 2834960 D TetR family transcriptional regulator 2834379..2834960 Sphingopyxis alaskensis RB2256 4081843 YP_617731.1 CDS Sala_2693 NC_008048.1 2835017 2835244 D 4-oxalocrotonate tautomerase 2835017..2835244 Sphingopyxis alaskensis RB2256 4081844 YP_617732.1 CDS Sala_2694 NC_008048.1 2835270 2835845 D alkylhydroperoxidase AhpD core 2835270..2835845 Sphingopyxis alaskensis RB2256 4081845 YP_617733.1 CDS Sala_2695 NC_008048.1 2836263 2836871 R peroxidase-like protein complement(2836263..2836871) Sphingopyxis alaskensis RB2256 4081846 YP_617734.1 CDS Sala_2696 NC_008048.1 2836881 2837483 R CDP-alcohol phosphatidyltransferase complement(2836881..2837483) Sphingopyxis alaskensis RB2256 4081905 YP_617735.1 CDS Sala_2697 NC_008048.1 2837488 2838753 R Na+ dependent nucleoside transporter-like protein complement(2837488..2838753) Sphingopyxis alaskensis RB2256 4081906 YP_617736.1 CDS Sala_2698 NC_008048.1 2838769 2841801 R TonB-dependent receptor complement(2838769..2841801) Sphingopyxis alaskensis RB2256 4081907 YP_617737.1 CDS Sala_2699 NC_008048.1 2841961 2842344 D hypothetical protein 2841961..2842344 Sphingopyxis alaskensis RB2256 4081908 YP_617738.1 CDS Sala_2700 NC_008048.1 2842341 2842766 R hypothetical protein complement(2842341..2842766) Sphingopyxis alaskensis RB2256 4081909 YP_617739.1 CDS Sala_2701 NC_008048.1 2842851 2845004 R pyridine nucleotide-disulfide oxidoreductase dimerisation subunit complement(2842851..2845004) Sphingopyxis alaskensis RB2256 4081910 YP_617740.1 CDS Sala_2702 NC_008048.1 2845062 2845256 R hypothetical protein complement(2845062..2845256) Sphingopyxis alaskensis RB2256 4081911 YP_617741.1 CDS Sala_2703 NC_008048.1 2845253 2845861 R Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor complement(2845253..2845861) Sphingopyxis alaskensis RB2256 4081912 YP_617742.1 CDS Sala_2704 NC_008048.1 2845862 2846071 R hypothetical protein complement(2845862..2846071) Sphingopyxis alaskensis RB2256 4081913 YP_617743.1 CDS Sala_2705 NC_008048.1 2846086 2847210 R FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(2846086..2847210) Sphingopyxis alaskensis RB2256 4081914 YP_617744.1 CDS Sala_2706 NC_008048.1 2853506 2855038 D polysaccharide biosynthesis protein 2853506..2855038 Sphingopyxis alaskensis RB2256 4082407 YP_617745.1 CDS Sala_2707 NC_008048.1 2855023 2855448 R signal-transduction protein complement(2855023..2855448) Sphingopyxis alaskensis RB2256 4082408 YP_617746.1 CDS Sala_2708 NC_008048.1 2855573 2855875 D hypothetical protein 2855573..2855875 Sphingopyxis alaskensis RB2256 4082409 YP_617747.1 CDS Sala_2709 NC_008048.1 2855872 2856264 D thioesterase superfamily protein 2855872..2856264 Sphingopyxis alaskensis RB2256 4082410 YP_617748.1 CDS Sala_2710 NC_008048.1 2856261 2857820 R hypothetical protein complement(2856261..2857820) Sphingopyxis alaskensis RB2256 4082411 YP_617749.1 CDS Sala_2711 NC_008048.1 2857831 2859255 R hypothetical protein complement(2857831..2859255) Sphingopyxis alaskensis RB2256 4082412 YP_617750.1 CDS Sala_2712 NC_008048.1 2859332 2860153 R hypothetical protein complement(2859332..2860153) Sphingopyxis alaskensis RB2256 4082413 YP_617751.1 CDS Sala_2713 NC_008048.1 2860411 2861235 R HemK family modification methylase complement(2860411..2861235) Sphingopyxis alaskensis RB2256 4082414 YP_617752.1 CDS prfA NC_008048.1 2861337 2862404 R recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 complement(2861337..2862404) Sphingopyxis alaskensis RB2256 4082415 YP_617753.1 CDS hisS NC_008048.1 2862577 2863872 R catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase complement(2862577..2863872) Sphingopyxis alaskensis RB2256 4082416 YP_617754.1 CDS Sala_2716 NC_008048.1 2863914 2865995 D peptidase M61 2863914..2865995 Sphingopyxis alaskensis RB2256 4082417 YP_617755.1 CDS Sala_2717 NC_008048.1 2865992 2866621 R hypothetical protein complement(2865992..2866621) Sphingopyxis alaskensis RB2256 4082418 YP_617756.1 CDS Sala_2718 NC_008048.1 2866731 2867756 R catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase complement(2866731..2867756) Sphingopyxis alaskensis RB2256 4082419 YP_617757.1 CDS rplS NC_008048.1 2867865 2868242 R this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 complement(2867865..2868242) Sphingopyxis alaskensis RB2256 4082420 YP_617758.1 CDS trmD NC_008048.1 2868247 2868984 R methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase complement(2868247..2868984) Sphingopyxis alaskensis RB2256 4082421 YP_617759.1 CDS Sala_2721 NC_008048.1 2868981 2869358 R PilT protein-like protein complement(2868981..2869358) Sphingopyxis alaskensis RB2256 4082422 YP_617760.1 CDS Sala_2722 NC_008048.1 2869355 2869720 R hypothetical protein complement(2869355..2869720) Sphingopyxis alaskensis RB2256 4082423 YP_617761.1 CDS Sala_2723 NC_008048.1 2869767 2870699 R LysR family transcriptional regulator complement(2869767..2870699) Sphingopyxis alaskensis RB2256 4082462 YP_617762.1 CDS Sala_2724 NC_008048.1 2870711 2870959 D hypothetical protein 2870711..2870959 Sphingopyxis alaskensis RB2256 4082463 YP_617763.1 CDS Sala_2725 NC_008048.1 2871052 2871936 R OmpA/MotB protein complement(2871052..2871936) Sphingopyxis alaskensis RB2256 4082464 YP_617764.1 CDS Sala_2726 NC_008048.1 2872140 2872631 R 16S rRNA processing protein RimM complement(2872140..2872631) Sphingopyxis alaskensis RB2256 4082465 YP_617765.1 CDS Sala_2727 NC_008048.1 2872638 2873243 R 30S ribosomal protein S16 complement(2872638..2873243) Sphingopyxis alaskensis RB2256 4082466 YP_617766.1 CDS Sala_2728 NC_008048.1 2873285 2874739 R signal recognition particle protein complement(2873285..2874739) Sphingopyxis alaskensis RB2256 4082467 YP_617767.1 CDS Sala_2729 NC_008048.1 2874989 2876620 D diguanylate cyclase/phosphodiesterase 2874989..2876620 Sphingopyxis alaskensis RB2256 4082468 YP_617768.1 CDS dapF NC_008048.1 2876673 2877479 D involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 2876673..2877479 Sphingopyxis alaskensis RB2256 4082469 YP_617769.1 CDS Sala_2731 NC_008048.1 2877476 2878801 D MiaB-like tRNA modifying enzyme 2877476..2878801 Sphingopyxis alaskensis RB2256 4082470 YP_617770.1 CDS Sala_2732 NC_008048.1 2878798 2879724 D signal recognition particle-docking protein FtsY 2878798..2879724 Sphingopyxis alaskensis RB2256 4082471 YP_617771.1 CDS Sala_2733 NC_008048.1 2879721 2880389 D intracellular septation protein A 2879721..2880389 Sphingopyxis alaskensis RB2256 4082472 YP_617772.1 CDS Sala_2734 NC_008048.1 2880468 2881040 D hypothetical protein 2880468..2881040 Sphingopyxis alaskensis RB2256 4082473 YP_617773.1 CDS Sala_2735 NC_008048.1 2881078 2881632 R acetyltransferase complement(2881078..2881632) Sphingopyxis alaskensis RB2256 4082474 YP_617774.1 CDS Sala_2736 NC_008048.1 2881629 2883887 R hypothetical protein complement(2881629..2883887) Sphingopyxis alaskensis RB2256 4082475 YP_617775.1 CDS Sala_2737 NC_008048.1 2883892 2884890 R catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase complement(2883892..2884890) Sphingopyxis alaskensis RB2256 4082476 YP_617776.1 CDS Sala_2738 NC_008048.1 2884970 2886544 R peptidase M23B complement(2884970..2886544) Sphingopyxis alaskensis RB2256 4082477 YP_617777.1 CDS Sala_2739 NC_008048.1 2886787 2889549 D helicase-like protein 2886787..2889549 Sphingopyxis alaskensis RB2256 4082478 YP_617778.1 CDS Sala_2740 NC_008048.1 2889557 2889907 D RNA-binding protein S4 2889557..2889907 Sphingopyxis alaskensis RB2256 4082479 YP_617779.1 CDS Sala_2741 NC_008048.1 2890022 2890360 D 4Fe-4S ferredoxin 2890022..2890360 Sphingopyxis alaskensis RB2256 4082480 YP_617780.1 CDS clpP NC_008048.1 2890513 2891163 D hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 2890513..2891163 Sphingopyxis alaskensis RB2256 4082481 YP_617781.1 CDS clpX NC_008048.1 2891356 2892627 D binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 2891356..2892627 Sphingopyxis alaskensis RB2256 4080228 YP_617782.1 CDS Sala_2744 NC_008048.1 2892898 2896083 D putative outer membrane protein with a TonB box 2892898..2896083 Sphingopyxis alaskensis RB2256 4080229 YP_617783.1 CDS Sala_2745 NC_008048.1 2896124 2896792 R endonuclease III complement(2896124..2896792) Sphingopyxis alaskensis RB2256 4080230 YP_617784.1 CDS Sala_2746 NC_008048.1 2897026 2897469 D hypothetical protein 2897026..2897469 Sphingopyxis alaskensis RB2256 4080231 YP_617785.1 CDS Sala_2747 NC_008048.1 2897516 2898241 R catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase complement(2897516..2898241) Sphingopyxis alaskensis RB2256 4080232 YP_617786.1 CDS Sala_2748 NC_008048.1 2898365 2899066 D Modulates the activities of several enzymes which are inactive in their acetylated form; NAD-dependent deacetylase 2898365..2899066 Sphingopyxis alaskensis RB2256 4080233 YP_617787.1 CDS Sala_2749 NC_008048.1 2899069 2899536 R zinc-binding CMP/dCMP deaminase complement(2899069..2899536) Sphingopyxis alaskensis RB2256 4080234 YP_617788.1 CDS rpmB NC_008048.1 2899667 2899960 D required for 70S ribosome assembly; 50S ribosomal protein L28 2899667..2899960 Sphingopyxis alaskensis RB2256 4080235 YP_617789.1 CDS Sala_2751 NC_008048.1 2900000 2900998 R hypothetical protein complement(2900000..2900998) Sphingopyxis alaskensis RB2256 4080236 YP_617790.1 CDS Sala_2752 NC_008048.1 2901318 2901719 D 17 kDa surface antigen 2901318..2901719 Sphingopyxis alaskensis RB2256 4080237 YP_617791.1 CDS Sala_2753 NC_008048.1 2901908 2902999 D Ppx/GppA phosphatase 2901908..2902999 Sphingopyxis alaskensis RB2256 4080238 YP_617792.1 CDS Sala_2754 NC_008048.1 2902996 2903688 D ribosomal RNA methyltransferase RrmJ/FtsJ 2902996..2903688 Sphingopyxis alaskensis RB2256 4080239 YP_617793.1 CDS Sala_2755 NC_008048.1 2903730 2905196 D peptidase S41 2903730..2905196 Sphingopyxis alaskensis RB2256 4080240 YP_617794.1 CDS Sala_2756 NC_008048.1 2905222 2906679 D catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase 2905222..2906679 Sphingopyxis alaskensis RB2256 4080241 YP_617795.1 CDS Sala_2757 NC_008048.1 2906667 2906933 R hypothetical protein complement(2906667..2906933) Sphingopyxis alaskensis RB2256 4080242 YP_617796.1 CDS Sala_2758 NC_008048.1 2907047 2908087 D periplasmic protein-like protein 2907047..2908087 Sphingopyxis alaskensis RB2256 4080243 YP_617797.1 CDS Sala_2759 NC_008048.1 2908033 2909298 R Type I secretion membrane fusion protein, HlyD complement(2908033..2909298) Sphingopyxis alaskensis RB2256 4080244 YP_617798.1 CDS Sala_2760 NC_008048.1 2909295 2909705 R hypothetical protein complement(2909295..2909705) Sphingopyxis alaskensis RB2256 4080245 YP_617799.1 CDS Sala_2761 NC_008048.1 2909783 2911033 D type II secretion system protein E 2909783..2911033 Sphingopyxis alaskensis RB2256 4080246 YP_617800.1 CDS Sala_2762 NC_008048.1 2911035 2912036 D type II secretion system protein 2911035..2912036 Sphingopyxis alaskensis RB2256 4080324 YP_617801.1 CDS Sala_2763 NC_008048.1 2912038 2913018 D type II secretion system protein 2912038..2913018 Sphingopyxis alaskensis RB2256 4080325 YP_617802.1 CDS Sala_2764 NC_008048.1 2913020 2913925 D hypothetical protein 2913020..2913925 Sphingopyxis alaskensis RB2256 4080326 YP_617803.1 CDS Sala_2765 NC_008048.1 2913937 2914812 D hypothetical protein 2913937..2914812 Sphingopyxis alaskensis RB2256 4080327 YP_617804.1 CDS Sala_2766 NC_008048.1 2914805 2915296 D peptidase A24A, prepilin type IV 2914805..2915296 Sphingopyxis alaskensis RB2256 4080328 YP_617805.1 CDS Sala_2767 NC_008048.1 2915374 2919672 R hypothetical protein complement(2915374..2919672) Sphingopyxis alaskensis RB2256 4080329 YP_617806.1 CDS Sala_2768 NC_008048.1 2919674 2921599 R hypothetical protein complement(2919674..2921599) Sphingopyxis alaskensis RB2256 4080330 YP_617807.1 CDS Sala_2769 NC_008048.1 2921603 2923579 R hypothetical protein complement(2921603..2923579) Sphingopyxis alaskensis RB2256 4080331 YP_617808.1 CDS Sala_2770 NC_008048.1 2923581 2925014 R hypothetical protein complement(2923581..2925014) Sphingopyxis alaskensis RB2256 4080332 YP_617809.1 CDS Sala_2771 NC_008048.1 2925064 2926419 R converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; glutamate dehydrogenase complement(2925064..2926419) Sphingopyxis alaskensis RB2256 4080333 YP_617810.1 CDS Sala_2772 NC_008048.1 2926565 2927515 D hypothetical protein 2926565..2927515 Sphingopyxis alaskensis RB2256 4080334 YP_617811.1 CDS Sala_2773 NC_008048.1 2927701 2930796 R proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichia coli this protein self regulates transcription via a DNA-binding domain at the N-terminus but the proteins from this group do not and in addition appear to have a truncated C-terminal domain; bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase complement(2927701..2930796) Sphingopyxis alaskensis RB2256 4080335 YP_617812.1 CDS Sala_2774 NC_008048.1 2930896 2931366 D AsnC family transcriptional regulator 2930896..2931366 Sphingopyxis alaskensis RB2256 4080336 YP_617813.1 CDS Sala_2775 NC_008048.1 2931531 2932316 R transglutaminase complement(2931531..2932316) Sphingopyxis alaskensis RB2256 4080338 YP_617814.1 CDS Sala_2776 NC_008048.1 2932398 2933636 D major facilitator superfamily transporter 2932398..2933636 Sphingopyxis alaskensis RB2256 4080339 YP_617815.1 CDS Sala_2777 NC_008048.1 2933609 2934370 R molybdopterin binding domain-containing protein complement(2933609..2934370) Sphingopyxis alaskensis RB2256 4080340 YP_617816.1 CDS Sala_2778 NC_008048.1 2934474 2935109 D glutathione S-transferase-like protein 2934474..2935109 Sphingopyxis alaskensis RB2256 4080341 YP_617817.1 CDS Sala_2779 NC_008048.1 2935995 2937632 D hypothetical protein 2935995..2937632 Sphingopyxis alaskensis RB2256 4080342 YP_617818.1 CDS Sala_2780 NC_008048.1 2937629 2940907 D DNA polymerase III subunit alpha 2937629..2940907 Sphingopyxis alaskensis RB2256 4080361 YP_617819.1 CDS Sala_2781 NC_008048.1 2941130 2941753 D AraC family transcriptional regulator 2941130..2941753 Sphingopyxis alaskensis RB2256 4080362 YP_617820.1 CDS pheS NC_008048.1 2941893 2942990 D catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 2941893..2942990 Sphingopyxis alaskensis RB2256 4080363 YP_617821.1 CDS pheT NC_008048.1 2942987 2945383 D catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 2942987..2945383 Sphingopyxis alaskensis RB2256 4080364 YP_617822.1 CDS Sala_2784 NC_008048.1 2945610 2947094 D sulfate transporter 2945610..2947094 Sphingopyxis alaskensis RB2256 4080365 YP_617823.1 CDS Sala_2785 NC_008048.1 2947108 2947959 D hypothetical protein 2947108..2947959 Sphingopyxis alaskensis RB2256 4080366 YP_617824.1 CDS Sala_2786 NC_008048.1 2947967 2948305 D TraR/DksA family transcriptional regulator 2947967..2948305 Sphingopyxis alaskensis RB2256 4080367 YP_617825.1 CDS Sala_2787 NC_008048.1 2948318 2951125 R catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; PII uridylyl-transferase complement(2948318..2951125) Sphingopyxis alaskensis RB2256 4080368 YP_617826.1 CDS Sala_2788 NC_008048.1 2951214 2951636 D hypothetical protein 2951214..2951636 Sphingopyxis alaskensis RB2256 4080369 YP_617827.1 CDS Sala_2789 NC_008048.1 2951638 2952249 D TetR family transcriptional regulator 2951638..2952249 Sphingopyxis alaskensis RB2256 4080370 YP_617828.1 CDS Sala_2790 NC_008048.1 2952246 2953181 D N-acetyltransferase GCN5 2952246..2953181 Sphingopyxis alaskensis RB2256 4080371 YP_617829.1 CDS Sala_2791 NC_008048.1 2953178 2955772 R This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS complement(2953178..2955772) Sphingopyxis alaskensis RB2256 4080372 YP_617830.1 CDS Sala_2792 NC_008048.1 2956269 2958533 D NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme 2956269..2958533 Sphingopyxis alaskensis RB2256 4080373 YP_617831.1 CDS Sala_2793 NC_008048.1 2958643 2959128 R tmRNA-binding small protein A complement(2958643..2959128) Sphingopyxis alaskensis RB2256 4080374 YP_617832.1 CDS Sala_2794 NC_008048.1 2959298 2959828 D hypothetical protein 2959298..2959828 Sphingopyxis alaskensis RB2256 4080375 YP_617833.1 CDS Sala_2795 NC_008048.1 2959825 2960355 D hypothetical protein 2959825..2960355 Sphingopyxis alaskensis RB2256 4080376 YP_617834.1 CDS Sala_2796 NC_008048.1 2960411 2961115 R hypothetical protein complement(2960411..2961115) Sphingopyxis alaskensis RB2256 4080377 YP_617835.1 CDS adk NC_008048.1 2961165 2961824 R essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase complement(2961165..2961824) Sphingopyxis alaskensis RB2256 4080378 YP_617836.1 CDS secY NC_008048.1 2961872 2963245 R forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY complement(2961872..2963245) Sphingopyxis alaskensis RB2256 4080379 YP_617837.1 CDS rplO NC_008048.1 2963514 2964041 R late assembly protein; 50S ribosomal protein L15 complement(2963514..2964041) Sphingopyxis alaskensis RB2256 4080380 YP_617838.1 CDS Sala_2800 NC_008048.1 2964115 2964297 R 50S ribosomal protein L30 complement(2964115..2964297) Sphingopyxis alaskensis RB2256 4080381 YP_617839.1 CDS rpsE NC_008048.1 2964302 2965030 R located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 complement(2964302..2965030) Sphingopyxis alaskensis RB2256 4080382 YP_617840.1 CDS rplR NC_008048.1 2965033 2965386 R binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 complement(2965033..2965386) Sphingopyxis alaskensis RB2256 4080383 YP_617841.1 CDS rplF NC_008048.1 2965390 2965923 R ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 complement(2965390..2965923) Sphingopyxis alaskensis RB2256 4080384 YP_617842.1 CDS rpsH NC_008048.1 2965923 2966327 R binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 complement(2965923..2966327) Sphingopyxis alaskensis RB2256 4080385 YP_617843.1 CDS rpsN NC_008048.1 2966340 2966645 R located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 complement(2966340..2966645) Sphingopyxis alaskensis RB2256 4080386 YP_617844.1 CDS rplE NC_008048.1 2966699 2967277 R part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 complement(2966699..2967277) Sphingopyxis alaskensis RB2256 4080387 YP_617845.1 CDS rplX NC_008048.1 2967270 2967587 R assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 complement(2967270..2967587) Sphingopyxis alaskensis RB2256 4080388 YP_617846.1 CDS rplN NC_008048.1 2967590 2967958 R binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 complement(2967590..2967958) Sphingopyxis alaskensis RB2256 4080389 YP_617847.1 CDS rpsQ NC_008048.1 2968027 2968293 R primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 complement(2968027..2968293) Sphingopyxis alaskensis RB2256 4080390 YP_617848.1 CDS Sala_2810 NC_008048.1 2968305 2968508 R one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 complement(2968305..2968508) Sphingopyxis alaskensis RB2256 4080391 YP_617849.1 CDS rplP NC_008048.1 2968513 2968944 R located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 complement(2968513..2968944) Sphingopyxis alaskensis RB2256 4080392 YP_617850.1 CDS rpsC NC_008048.1 2968956 2969663 R forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 complement(2968956..2969663) Sphingopyxis alaskensis RB2256 4080393 YP_617851.1 CDS rplV NC_008048.1 2969665 2970045 R binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 complement(2969665..2970045) Sphingopyxis alaskensis RB2256 4080394 YP_617852.1 CDS rpsS NC_008048.1 2970045 2970320 R protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 complement(2970045..2970320) Sphingopyxis alaskensis RB2256 4080395 YP_617853.1 CDS rplB NC_008048.1 2970324 2971160 R one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 complement(2970324..2971160) Sphingopyxis alaskensis RB2256 4080396 YP_617854.1 CDS rplW NC_008048.1 2971183 2971491 R binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 complement(2971183..2971491) Sphingopyxis alaskensis RB2256 4080397 YP_617855.1 CDS rplD NC_008048.1 2971484 2972110 R L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 complement(2971484..2972110) Sphingopyxis alaskensis RB2256 4080398 YP_617856.1 CDS rplC NC_008048.1 2972113 2972886 R binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 complement(2972113..2972886) Sphingopyxis alaskensis RB2256 4080399 YP_617857.1 CDS rpsJ NC_008048.1 2973201 2973512 R NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 complement(2973201..2973512) Sphingopyxis alaskensis RB2256 4080400 YP_617858.1 CDS Sala_2820 NC_008048.1 2973661 2974854 R EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu complement(2973661..2974854) Sphingopyxis alaskensis RB2256 4080401 YP_617859.1 CDS Sala_2821 NC_008048.1 2974972 2977065 R EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G complement(2974972..2977065) Sphingopyxis alaskensis RB2256 4080402 YP_617860.1 CDS Sala_2822 NC_008048.1 2977162 2977632 R binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 complement(2977162..2977632) Sphingopyxis alaskensis RB2256 4080403 YP_617861.1 CDS rpsL NC_008048.1 2977710 2978081 R interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 complement(2977710..2978081) Sphingopyxis alaskensis RB2256 4080404 YP_617862.1 CDS Sala_2824 NC_008048.1 2978359 2979420 R peptidase T2, asparaginase 2 complement(2978359..2979420) Sphingopyxis alaskensis RB2256 4080405 YP_617863.1 CDS Sala_2825 NC_008048.1 2979464 2980765 R amidohydrolase complement(2979464..2980765) Sphingopyxis alaskensis RB2256 4080406 YP_617864.1 CDS Sala_2826 NC_008048.1 2980806 2982962 R peptidase S8/S53 subtilisin kexin sedolisin complement(2980806..2982962) Sphingopyxis alaskensis RB2256 4080407 YP_617865.1 CDS Sala_2827 NC_008048.1 2983598 2984311 D pyrimidine 5-nucleotidase 2983598..2984311 Sphingopyxis alaskensis RB2256 4080408 YP_617866.1 CDS dapD NC_008048.1 2984308 2985150 D catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 2984308..2985150 Sphingopyxis alaskensis RB2256 4080409 YP_617867.1 CDS gpmA NC_008048.1 2985157 2985843 R 2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase complement(2985157..2985843) Sphingopyxis alaskensis RB2256 4080410 YP_617868.1 CDS Sala_2830 NC_008048.1 2986033 2986491 D heat shock protein Hsp20 2986033..2986491 Sphingopyxis alaskensis RB2256 4080411 YP_617869.1 CDS Sala_2831 NC_008048.1 2986552 2987019 R N-acetyltransferase GCN5 complement(2986552..2987019) Sphingopyxis alaskensis RB2256 4080412 YP_617870.1 CDS Sala_2832 NC_008048.1 2987016 2988125 R peptidase M14, carboxypeptidase A complement(2987016..2988125) Sphingopyxis alaskensis RB2256 4080413 YP_617871.1 CDS Sala_2833 NC_008048.1 2988122 2988748 R hypothetical protein complement(2988122..2988748) Sphingopyxis alaskensis RB2256 4080414 YP_617872.1 CDS Sala_2834 NC_008048.1 2988820 2989485 R cell wall hydrolase SleB complement(2988820..2989485) Sphingopyxis alaskensis RB2256 4080415 YP_617873.1 CDS Sala_2835 NC_008048.1 2989683 2990018 R hypothetical protein complement(2989683..2990018) Sphingopyxis alaskensis RB2256 4080416 YP_617874.1 CDS Sala_2836 NC_008048.1 2990144 2990608 R putative PTS IIA-like nitrogen-regulatory protein PtsN complement(2990144..2990608) Sphingopyxis alaskensis RB2256 4080417 YP_617875.1 CDS Sala_2837 NC_008048.1 2990758 2991333 R sigma 54 modulation protein/ribosomal protein S30EA complement(2990758..2991333) Sphingopyxis alaskensis RB2256 4080418 YP_617876.1 CDS Sala_2838 NC_008048.1 2991379 2992074 R DNA polymerase III subunit epsilon complement(2991379..2992074) Sphingopyxis alaskensis RB2256 4080631 YP_617877.1 CDS coaE NC_008048.1 2992094 2992717 R catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase complement(2992094..2992717) Sphingopyxis alaskensis RB2256 4080632 YP_617878.1 CDS Sala_2840 NC_008048.1 2992714 2993538 R shikimate 5-dehydrogenase complement(2992714..2993538) Sphingopyxis alaskensis RB2256 4080633 YP_617879.1 CDS Sala_2841 NC_008048.1 2993535 2994131 R maf protein complement(2993535..2994131) Sphingopyxis alaskensis RB2256 4080634 YP_617880.1 CDS Sala_2842 NC_008048.1 2994128 2994940 R hypothetical protein complement(2994128..2994940) Sphingopyxis alaskensis RB2256 4080635 YP_617881.1 CDS hemE NC_008048.1 2995278 2996306 D catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 2995278..2996306 Sphingopyxis alaskensis RB2256 4080636 YP_617882.1 CDS Sala_2844 NC_008048.1 2996308 2996757 D hypothetical protein 2996308..2996757 Sphingopyxis alaskensis RB2256 4080637 YP_617883.1 CDS rho NC_008048.1 2996954 2998210 D An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 2996954..2998210 Sphingopyxis alaskensis RB2256 4080638 YP_617884.1 CDS Sala_2846 NC_008048.1 2998233 2998955 D integral membrane protein TerC 2998233..2998955 Sphingopyxis alaskensis RB2256 4080639 YP_617885.1 CDS Sala_2847 NC_008048.1 2999079 2999324 D hypothetical protein 2999079..2999324 Sphingopyxis alaskensis RB2256 4080640 YP_617886.1 CDS Sala_2848 NC_008048.1 2999311 2999733 D hypothetical protein 2999311..2999733 Sphingopyxis alaskensis RB2256 4080641 YP_617887.1 CDS Sala_2849 NC_008048.1 2999787 3000188 D hypothetical protein 2999787..3000188 Sphingopyxis alaskensis RB2256 4080642 YP_617888.1 CDS Sala_2850 NC_008048.1 3000185 3000583 R hypothetical protein complement(3000185..3000583) Sphingopyxis alaskensis RB2256 4080643 YP_617889.1 CDS Sala_2851 NC_008048.1 3000580 3001278 R carboxymethylenebutenolidase complement(3000580..3001278) Sphingopyxis alaskensis RB2256 4080644 YP_617890.1 CDS Sala_2852 NC_008048.1 3001384 3001677 D hypothetical protein 3001384..3001677 Sphingopyxis alaskensis RB2256 4080645 YP_617891.1 CDS trmE NC_008048.1 3001746 3003005 D in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 3001746..3003005 Sphingopyxis alaskensis RB2256 4080646 YP_617892.1 CDS Sala_2854 NC_008048.1 3003081 3004940 D GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 3003081..3004940 Sphingopyxis alaskensis RB2256 4080647 YP_617893.1 CDS Sala_2855 NC_008048.1 3004996 3005697 D methyltransferase GidB 3004996..3005697 Sphingopyxis alaskensis RB2256 4080648 YP_617894.1 CDS Sala_2856 NC_008048.1 3005694 3006476 D cobyrinic acid a,c-diamide synthase 3005694..3006476 Sphingopyxis alaskensis RB2256 4080649 YP_617895.1 CDS Sala_2857 NC_008048.1 3006477 3007436 D parB-like partition proteins 3006477..3007436 Sphingopyxis alaskensis RB2256 4080650 YP_617896.1 CDS Sala_2858 NC_008048.1 3007769 3008266 D hypothetical protein 3007769..3008266 Sphingopyxis alaskensis RB2256 4080651 YP_617897.1 CDS Sala_2859 NC_008048.1 3008470 3009294 D hypothetical protein 3008470..3009294 Sphingopyxis alaskensis RB2256 4080652 YP_617898.1 CDS Sala_2860 NC_008048.1 3009326 3012124 D hypothetical protein 3009326..3012124 Sphingopyxis alaskensis RB2256 4080653 YP_617899.1 CDS Sala_2861 NC_008048.1 3012207 3013742 D hypothetical protein 3012207..3013742 Sphingopyxis alaskensis RB2256 4080654 YP_617900.1 CDS Sala_2862 NC_008048.1 3013768 3014199 D GtrA-like protein 3013768..3014199 Sphingopyxis alaskensis RB2256 4080655 YP_617901.1 CDS Sala_2863 NC_008048.1 3014196 3016034 D hypothetical protein 3014196..3016034 Sphingopyxis alaskensis RB2256 4080656 YP_617902.1 CDS Sala_2864 NC_008048.1 3016042 3016527 R protein-methionine-S-oxide reductase complement(3016042..3016527) Sphingopyxis alaskensis RB2256 4080657 YP_617903.1 CDS Sala_2865 NC_008048.1 3016583 3017839 R linalool 8-monooxygenase complement(3016583..3017839) Sphingopyxis alaskensis RB2256 4080658 YP_617904.1 CDS Sala_2866 NC_008048.1 3017925 3019169 R Na+ efflux pump permease-like protein complement(3017925..3019169) Sphingopyxis alaskensis RB2256 4080659 YP_617905.1 CDS Sala_2867 NC_008048.1 3019166 3020122 R ABC transporter complement(3019166..3020122) Sphingopyxis alaskensis RB2256 4080660 YP_617906.1 CDS Sala_2868 NC_008048.1 3020190 3021242 D 4Fe-4S binding protein 3020190..3021242 Sphingopyxis alaskensis RB2256 4080661 YP_617907.1 CDS Sala_2869 NC_008048.1 3021260 3021517 D hypothetical protein 3021260..3021517 Sphingopyxis alaskensis RB2256 4080662 YP_617908.1 CDS Sala_2870 NC_008048.1 3021514 3021888 R hypothetical protein complement(3021514..3021888) Sphingopyxis alaskensis RB2256 4080663 YP_617909.1 CDS Sala_2871 NC_008048.1 3021878 3022666 R hypothetical protein complement(3021878..3022666) Sphingopyxis alaskensis RB2256 4080664 YP_617910.1 CDS Sala_2872 NC_008048.1 3022677 3023675 D PfkB protein 3022677..3023675 Sphingopyxis alaskensis RB2256 4080665 YP_617911.1 CDS Sala_2873 NC_008048.1 3023774 3025300 R O-antigen and teichoic acid-like export protein complement(3023774..3025300) Sphingopyxis alaskensis RB2256 4080666 YP_617912.1 CDS gpsA NC_008048.1 3025377 3026369 R catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase complement(3025377..3026369) Sphingopyxis alaskensis RB2256 4080667 YP_617913.1 CDS Sala_2875 NC_008048.1 3026366 3027400 R in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; putative DNA-binding/iron metalloprotein/AP endonuclease complement(3026366..3027400) Sphingopyxis alaskensis RB2256 4080668 YP_617914.1 CDS hemC NC_008048.1 3027464 3028411 D transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 3027464..3028411 Sphingopyxis alaskensis RB2256 4080669 YP_617915.1 CDS Sala_2877 NC_008048.1 3028408 3029097 D uroporphyrinogen-III synthase 3028408..3029097 Sphingopyxis alaskensis RB2256 4080670 YP_617916.1 CDS Sala_2878 NC_008048.1 3029117 3030025 D hypothetical protein 3029117..3030025 Sphingopyxis alaskensis RB2256 4080671 YP_617917.1 CDS Sala_2879 NC_008048.1 3030073 3031275 D acyl-CoA dehydrogenase-like protein 3030073..3031275 Sphingopyxis alaskensis RB2256 4080672 YP_617918.1 CDS Sala_2880 NC_008048.1 3031268 3032395 D L-carnitine dehydratase/bile acid-inducible protein F 3031268..3032395 Sphingopyxis alaskensis RB2256 4080673 YP_617919.1 CDS Sala_2881 NC_008048.1 3032462 3032737 D hypothetical protein 3032462..3032737 Sphingopyxis alaskensis RB2256 4080674 YP_617920.1 CDS Sala_2882 NC_008048.1 3032827 3035187 R TonB-dependent receptor complement(3032827..3035187) Sphingopyxis alaskensis RB2256 4080675 YP_617921.1 CDS Sala_2883 NC_008048.1 3035391 3036026 D TetR family transcriptional regulator 3035391..3036026 Sphingopyxis alaskensis RB2256 4080676 YP_617922.1 CDS Sala_2884 NC_008048.1 3036057 3036569 D hypothetical protein 3036057..3036569 Sphingopyxis alaskensis RB2256 4080677 YP_617923.1 CDS Sala_2885 NC_008048.1 3036617 3037204 R methionine biosynthesis MetW complement(3036617..3037204) Sphingopyxis alaskensis RB2256 4080678 YP_617924.1 CDS metX NC_008048.1 3037204 3038325 R Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine; homoserine O-acetyltransferase complement(3037204..3038325) Sphingopyxis alaskensis RB2256 4080679 YP_617925.1 CDS Sala_2887 NC_008048.1 3038668 3039783 D catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 3038668..3039783 Sphingopyxis alaskensis RB2256 4080680 YP_617926.1 CDS Sala_2888 NC_008048.1 3039783 3040685 D dual function enzyme catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate and the formation of tyrosine from arogenate; cyclohexadienyl dehydrogenase 3039783..3040685 Sphingopyxis alaskensis RB2256 4080681 YP_617927.1 CDS Sala_2889 NC_008048.1 3040787 3041518 R phospholipid/glycerol acyltransferase complement(3040787..3041518) Sphingopyxis alaskensis RB2256 4080682 YP_617928.1 CDS Sala_2890 NC_008048.1 3041530 3042060 R hypothetical protein complement(3041530..3042060) Sphingopyxis alaskensis RB2256 4080683 YP_617929.1 CDS Sala_2891 NC_008048.1 3042057 3042962 R hypothetical protein complement(3042057..3042962) Sphingopyxis alaskensis RB2256 4080684 YP_617930.1 CDS Sala_2892 NC_008048.1 3042970 3043683 R ABC transporter complement(3042970..3043683) Sphingopyxis alaskensis RB2256 4080685 YP_617931.1 CDS Sala_2893 NC_008048.1 3043859 3044623 D Zinc finger/thioredoxin putative 3043859..3044623 Sphingopyxis alaskensis RB2256 4080686 YP_617932.1 CDS Sala_2894 NC_008048.1 3044761 3045816 R hypothetical protein complement(3044761..3045816) Sphingopyxis alaskensis RB2256 4080687 YP_617933.1 CDS Sala_2895 NC_008048.1 3046054 3047256 D L-carnitine dehydratase/bile acid-inducible protein F 3046054..3047256 Sphingopyxis alaskensis RB2256 4080919 YP_617934.1 CDS Sala_2896 NC_008048.1 3047414 3048628 D Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 3047414..3048628 Sphingopyxis alaskensis RB2256 4080920 YP_617935.1 CDS Sala_2897 NC_008048.1 3048634 3050217 D acyl-CoA dehydrogenase-like protein 3048634..3050217 Sphingopyxis alaskensis RB2256 4080921 YP_617936.1 CDS Sala_2898 NC_008048.1 3050502 3051002 D LuxR family transcriptional regulator 3050502..3051002 Sphingopyxis alaskensis RB2256 4080922 YP_617937.1 CDS Sala_2899 NC_008048.1 3051064 3051438 D hypothetical protein 3051064..3051438 Sphingopyxis alaskensis RB2256 4080923 YP_617938.1 CDS Sala_2900 NC_008048.1 3051463 3051876 D hypothetical protein 3051463..3051876 Sphingopyxis alaskensis RB2256 4080924 YP_617939.1 CDS Sala_2901 NC_008048.1 3051904 3052368 D MarR family transcriptional regulator 3051904..3052368 Sphingopyxis alaskensis RB2256 4080925 YP_617940.1 CDS Sala_2902 NC_008048.1 3052440 3053186 R RNA polymerase subunit sigma 28 complement(3052440..3053186) Sphingopyxis alaskensis RB2256 4080926 YP_617941.1 CDS flhA NC_008048.1 3053176 3055299 R membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA complement(3053176..3055299) Sphingopyxis alaskensis RB2256 4080927 YP_617942.1 CDS Sala_2904 NC_008048.1 3055296 3056126 R lytic transglycosylase, catalytic complement(3055296..3056126) Sphingopyxis alaskensis RB2256 4080928 YP_617943.1 CDS Sala_2905 NC_008048.1 3056201 3056506 R hypothetical protein complement(3056201..3056506) Sphingopyxis alaskensis RB2256 4080929 YP_617944.1 CDS Sala_2906 NC_008048.1 3056506 3056805 R putative anti-sigma-28 factor, FlgM complement(3056506..3056805) Sphingopyxis alaskensis RB2256 4080930 YP_617945.1 CDS Sala_2907 NC_008048.1 3056974 3057486 R flagellar protein complement(3056974..3057486) Sphingopyxis alaskensis RB2256 4080931 YP_617946.1 CDS Sala_2908 NC_008048.1 3057712 3058515 D flagellar basal-body rod protein FlgC 3057712..3058515 Sphingopyxis alaskensis RB2256 4080932 YP_617947.1 CDS Sala_2909 NC_008048.1 3058517 3058819 D flagellar hook capping protein 3058517..3058819 Sphingopyxis alaskensis RB2256 4080933 YP_617948.1 CDS Sala_2910 NC_008048.1 3058824 3059651 D hypothetical protein 3058824..3059651 Sphingopyxis alaskensis RB2256 4080934 YP_617949.1 CDS Sala_2911 NC_008048.1 3059687 3060430 D flagellar basal-body rod FlgF 3059687..3060430 Sphingopyxis alaskensis RB2256 4080935 YP_617950.1 CDS flgG NC_008048.1 3060442 3061227 D makes up the distal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagella; flagellar basal body rod protein FlgG 3060442..3061227 Sphingopyxis alaskensis RB2256 4080936 YP_617951.1 CDS Sala_2913 NC_008048.1 3061208 3061867 D flagellar L-ring protein 3061208..3061867 Sphingopyxis alaskensis RB2256 4080937 YP_617952.1 CDS flgI NC_008048.1 3061877 3062992 D part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein 3061877..3062992 Sphingopyxis alaskensis RB2256 4081109 YP_617953.1 CDS Sala_2915 NC_008048.1 3062989 3063306 D peptidoglycan hydrolase 3062989..3063306 Sphingopyxis alaskensis RB2256 4081110 YP_617954.1 CDS Sala_2916 NC_008048.1 3063303 3064628 D flagellar hook-associated protein 3063303..3064628 Sphingopyxis alaskensis RB2256 4081111 YP_617955.1 CDS Sala_2917 NC_008048.1 3064644 3065474 D flagellin-like protein 3064644..3065474 Sphingopyxis alaskensis RB2256 4081112 YP_617956.1 CDS Sala_2918 NC_008048.1 3065576 3066439 D With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotA 3065576..3066439 Sphingopyxis alaskensis RB2256 4081113 YP_617957.1 CDS Sala_2919 NC_008048.1 3066439 3067302 D OmpA/MotB protein 3066439..3067302 Sphingopyxis alaskensis RB2256 4081114 YP_617958.1 CDS Sala_2920 NC_008048.1 3067483 3068550 D sigma-54 dependent trancsriptional regulator 3067483..3068550 Sphingopyxis alaskensis RB2256 4081115 YP_617959.1 CDS Sala_2921 NC_008048.1 3068741 3069130 R flagellar protein FliS complement(3068741..3069130) Sphingopyxis alaskensis RB2256 4081116 YP_617960.1 CDS Sala_2922 NC_008048.1 3069156 3070526 R flagellar hook-associated 2-like protein complement(3069156..3070526) Sphingopyxis alaskensis RB2256 4081117 YP_617961.1 CDS flhB NC_008048.1 3070572 3071711 R membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB complement(3070572..3071711) Sphingopyxis alaskensis RB2256 4081118 YP_617962.1 CDS Sala_2924 NC_008048.1 3071715 3072494 R flagellar biosynthetic protein FliR complement(3071715..3072494) Sphingopyxis alaskensis RB2256 4081119 YP_617963.1 CDS Sala_2925 NC_008048.1 3072499 3072768 R flagellar biosynthetic protein FliQ complement(3072499..3072768) Sphingopyxis alaskensis RB2256 4081120 YP_617964.1 CDS fliP NC_008048.1 3072781 3073551 R FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP complement(3072781..3073551) Sphingopyxis alaskensis RB2256 4081121 YP_617965.1 CDS Sala_2927 NC_008048.1 3073541 3073819 R hypothetical protein complement(3073541..3073819) Sphingopyxis alaskensis RB2256 4081122 YP_617966.1 CDS Sala_2928 NC_008048.1 3073819 3074154 R flagellar motor switch FliN complement(3073819..3074154) Sphingopyxis alaskensis RB2256 4081123 YP_617967.1 CDS Sala_2929 NC_008048.1 3074147 3075085 R surface presentation of antigens (SPOA) protein complement(3074147..3075085) Sphingopyxis alaskensis RB2256 4081124 YP_617968.1 CDS Sala_2930 NC_008048.1 3075082 3075687 R flagellar basal body-associated protein FliL complement(3075082..3075687) Sphingopyxis alaskensis RB2256 4081125 YP_617969.1 CDS Sala_2931 NC_008048.1 3075705 3076955 R flagellar hook-length control protein complement(3075705..3076955) Sphingopyxis alaskensis RB2256 4081126 YP_617970.1 CDS Sala_2932 NC_008048.1 3076952 3077398 R hypothetical protein complement(3076952..3077398) Sphingopyxis alaskensis RB2256 4081127 YP_617971.1 CDS Sala_2933 NC_008048.1 3077395 3078726 R ATPase FliI/YscN complement(3077395..3078726) Sphingopyxis alaskensis RB2256 4081128 YP_617972.1 CDS Sala_2934 NC_008048.1 3078723 3079322 R flagellar biosynthetic protein complement(3078723..3079322) Sphingopyxis alaskensis RB2256 4080976 YP_617973.1 CDS Sala_2935 NC_008048.1 3079315 3080346 R flagellar motor switch protein FliG complement(3079315..3080346) Sphingopyxis alaskensis RB2256 4080977 YP_617974.1 CDS Sala_2936 NC_008048.1 3080339 3081994 R flagellar M-ring protein FliF complement(3080339..3081994) Sphingopyxis alaskensis RB2256 4080978 YP_617975.1 CDS Sala_2937 NC_008048.1 3081998 3082351 R flagellar hook-basal body complex protein (FliE) complement(3081998..3082351) Sphingopyxis alaskensis RB2256 4080979 YP_617976.1 CDS Sala_2938 NC_008048.1 3082603 3083421 D flagellin-like protein 3082603..3083421 Sphingopyxis alaskensis RB2256 4080980 YP_617977.1 CDS rplT NC_008048.1 3083620 3083985 R binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 complement(3083620..3083985) Sphingopyxis alaskensis RB2256 4080981 YP_617978.1 CDS rpmI NC_008048.1 3083998 3084201 R 50S ribosomal protein L35 complement(3083998..3084201) Sphingopyxis alaskensis RB2256 4080982 YP_617979.1 CDS Sala_2941 NC_008048.1 3084324 3085106 R histidinol-phosphate phosphatase complement(3084324..3085106) Sphingopyxis alaskensis RB2256 4080983 YP_617980.1 CDS Sala_2942 NC_008048.1 3085178 3086113 R catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase complement(3085178..3086113) Sphingopyxis alaskensis RB2256 4080984 YP_617981.1 CDS nadE NC_008048.1 3086293 3087963 D NH(3)-dependent; catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 3086293..3087963 Sphingopyxis alaskensis RB2256 4080985 YP_617982.1 CDS Sala_2944 NC_008048.1 3087994 3088416 D DoxX protein 3087994..3088416 Sphingopyxis alaskensis RB2256 4080986 YP_617983.1 CDS gltX NC_008048.1 3088458 3089777 D Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 3088458..3089777 Sphingopyxis alaskensis RB2256 4080987 YP_617984.1 CDS Sala_2946 NC_008048.1 3089940 3090668 D TonB-like protein 3089940..3090668 Sphingopyxis alaskensis RB2256 4080988 YP_617985.1 CDS rpmG NC_008048.1 3090878 3091045 D in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 3090878..3091045 Sphingopyxis alaskensis RB2256 4080989 YP_617986.1 CDS Sala_2948 NC_008048.1 3091177 3091656 R MarR family transcriptional regulator complement(3091177..3091656) Sphingopyxis alaskensis RB2256 4080990 YP_617987.1 CDS Sala_2949 NC_008048.1 3091851 3092429 D L-2,4-diaminobutyric acid acetyltransferase 3091851..3092429 Sphingopyxis alaskensis RB2256 4080991 YP_617988.1 CDS Sala_2950 NC_008048.1 3092431 3093738 D catalyzes the reversible formation of diaminobutyrate and 2-oxoglutarate from glutamate and L-aspartic beta-semialdehyde; diaminobutyrate--2-oxoglutarate aminotransferase 3092431..3093738 Sphingopyxis alaskensis RB2256 4080992 YP_617989.1 CDS ectC NC_008048.1 3093755 3094168 D N-acetyldiaminobutyrate dehydratase; catalyzes the formation of the osmoprotectant ecotoine from gamma-N-acetyl-alpha,gamma-diaminobutyric acid; L-ectoine synthase 3093755..3094168 Sphingopyxis alaskensis RB2256 4080993 YP_617990.1 CDS Sala_2952 NC_008048.1 3094200 3095120 D ectoine hydroxylase 3094200..3095120 Sphingopyxis alaskensis RB2256 4080994 YP_617991.1 CDS Sala_2953 NC_008048.1 3095117 3096559 D catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; aspartate kinase 3095117..3096559 Sphingopyxis alaskensis RB2256 4081069 YP_617992.1 CDS Sala_2954 NC_008048.1 3096584 3097822 D major facilitator superfamily transporter 3096584..3097822 Sphingopyxis alaskensis RB2256 4081070 YP_617993.1 CDS Sala_2955 NC_008048.1 3097826 3099160 D general substrate transporter 3097826..3099160 Sphingopyxis alaskensis RB2256 4081071 YP_617994.1 CDS Sala_2956 NC_008048.1 3099168 3099875 R putative transmembrane anti-sigma factor complement(3099168..3099875) Sphingopyxis alaskensis RB2256 4081072 YP_617995.1 CDS Sala_2957 NC_008048.1 3099872 3100360 R ECF subfamily RNA polymerase sigma-24 factor complement(3099872..3100360) Sphingopyxis alaskensis RB2256 4081073 YP_617996.1 CDS Sala_2958 NC_008048.1 3100469 3101740 D peptidase S8/S53 subtilisin kexin sedolisin 3100469..3101740 Sphingopyxis alaskensis RB2256 4081074 YP_617997.1 CDS Sala_2959 NC_008048.1 3101837 3102766 D hypothetical protein 3101837..3102766 Sphingopyxis alaskensis RB2256 4081075 YP_617998.1 CDS Sala_2960 NC_008048.1 3102820 3103569 D LuxR family transcriptional regulator 3102820..3103569 Sphingopyxis alaskensis RB2256 4081076 YP_617999.1 CDS Sala_2961 NC_008048.1 3103736 3104788 R putative acyl-carrier protein complement(3103736..3104788) Sphingopyxis alaskensis RB2256 4081077 YP_618000.1 CDS Sala_2962 NC_008048.1 3104785 3106986 R transketolase, central region complement(3104785..3106986) Sphingopyxis alaskensis RB2256 4081078 YP_618001.1 CDS Sala_2963 NC_008048.1 3107153 3107863 D hypothetical protein 3107153..3107863 Sphingopyxis alaskensis RB2256 4081079 YP_618002.1 CDS Sala_2964 NC_008048.1 3107860 3109089 D hypothetical protein 3107860..3109089 Sphingopyxis alaskensis RB2256 4081080 YP_618003.1 CDS Sala_2965 NC_008048.1 3109145 3110041 D ATPase 3109145..3110041 Sphingopyxis alaskensis RB2256 4081081 YP_618004.1 CDS Sala_2966 NC_008048.1 3110038 3111348 D hypothetical protein 3110038..3111348 Sphingopyxis alaskensis RB2256 4081082 YP_618005.1 CDS Sala_2967 NC_008048.1 3111345 3112388 D hypothetical protein 3111345..3112388 Sphingopyxis alaskensis RB2256 4081083 YP_618006.1 CDS Sala_2968 NC_008048.1 3112385 3113251 D RDD domain-containing protein 3112385..3113251 Sphingopyxis alaskensis RB2256 4081084 YP_618007.1 CDS Sala_2969 NC_008048.1 3113238 3113945 D nitroreductase 3113238..3113945 Sphingopyxis alaskensis RB2256 4081085 YP_618008.1 CDS Sala_2970 NC_008048.1 3113942 3114445 D hypothetical protein 3113942..3114445 Sphingopyxis alaskensis RB2256 4081086 YP_618009.1 CDS Sala_2971 NC_008048.1 3114575 3115075 R hypothetical protein complement(3114575..3115075) Sphingopyxis alaskensis RB2256 4081087 YP_618010.1 CDS Sala_2972 NC_008048.1 3115117 3117693 D DNA gyrase subunit B 3115117..3117693 Sphingopyxis alaskensis RB2256 4081088 YP_618011.1 CDS Sala_2973 NC_008048.1 3117794 3118198 D rare lipoprotein A 3117794..3118198 Sphingopyxis alaskensis RB2256 4083056 YP_618012.1 CDS Sala_2974 NC_008048.1 3118362 3118868 R hypothetical protein complement(3118362..3118868) Sphingopyxis alaskensis RB2256 4083057 YP_618013.1 CDS Sala_2975 NC_008048.1 3118996 3119403 D protein-methionine-S-oxide reductase 3118996..3119403 Sphingopyxis alaskensis RB2256 4083058 YP_618014.1 CDS Sala_2976 NC_008048.1 3119435 3121633 D penicillin-binding protein 1A 3119435..3121633 Sphingopyxis alaskensis RB2256 4083059 YP_618015.1 CDS Sala_2977 NC_008048.1 3121640 3122323 R hypothetical protein complement(3121640..3122323) Sphingopyxis alaskensis RB2256 4083060 YP_618016.1 CDS Sala_2978 NC_008048.1 3122352 3122798 R hypothetical protein complement(3122352..3122798) Sphingopyxis alaskensis RB2256 4083061 YP_618017.1 CDS Sala_2979 NC_008048.1 3122801 3123448 R electron transport protein SCO1/SenC complement(3122801..3123448) Sphingopyxis alaskensis RB2256 4083062 YP_618018.1 CDS Sala_2980 NC_008048.1 3123537 3124163 D ankyrin 3123537..3124163 Sphingopyxis alaskensis RB2256 4083063 YP_618019.1 CDS Sala_2981 NC_008048.1 3124219 3125493 D 3,4-dihydroxy-2-butanone 4-phosphate synthase 3124219..3125493 Sphingopyxis alaskensis RB2256 4083064 YP_618020.1 CDS ribH NC_008048.1 3125493 3125918 D RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 3125493..3125918 Sphingopyxis alaskensis RB2256 4083065 YP_618021.1 CDS Sala_2983 NC_008048.1 3125893 3126303 R hypothetical protein complement(3125893..3126303) Sphingopyxis alaskensis RB2256 4083066 YP_618022.1 CDS Sala_2984 NC_008048.1 3126615 3127700 R NADH:flavin oxidoreductase complement(3126615..3127700) Sphingopyxis alaskensis RB2256 4083067 YP_618023.1 CDS Sala_2985 NC_008048.1 3127740 3128567 D hypothetical protein 3127740..3128567 Sphingopyxis alaskensis RB2256 4083068 YP_618024.1 CDS Sala_2986 NC_008048.1 3128632 3128868 D hypothetical protein 3128632..3128868 Sphingopyxis alaskensis RB2256 4083069 YP_618025.1 CDS Sala_2987 NC_008048.1 3128865 3130724 D ferrous iron transport protein B 3128865..3130724 Sphingopyxis alaskensis RB2256 4083070 YP_618026.1 CDS Sala_2988 NC_008048.1 3130758 3131279 D single-strand binding protein 3130758..3131279 Sphingopyxis alaskensis RB2256 4083071 YP_618027.1 CDS Sala_2989 NC_008048.1 3131292 3131771 D hypothetical protein 3131292..3131771 Sphingopyxis alaskensis RB2256 4083072 YP_618028.1 CDS Sala_2990 NC_008048.1 3131768 3132385 R catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha complement(3131768..3132385) Sphingopyxis alaskensis RB2256 4083073 YP_618029.1 CDS Sala_2991 NC_008048.1 3132395 3133372 R riboflavin biosynthesis protein RibD complement(3132395..3133372) Sphingopyxis alaskensis RB2256 4083074 YP_618030.1 CDS Sala_2992 NC_008048.1 3133374 3133838 R hypothetical protein complement(3133374..3133838) Sphingopyxis alaskensis RB2256 4082936 YP_618031.1 CDS Sala_2993 NC_008048.1 3134117 3134578 R 4-hydroxybenzoyl-CoA thioesterase complement(3134117..3134578) Sphingopyxis alaskensis RB2256 4082937 YP_618032.1 CDS Sala_2994 NC_008048.1 3134588 3136414 R peptidase M24 complement(3134588..3136414) Sphingopyxis alaskensis RB2256 4082938 YP_618033.1 CDS Sala_2995 NC_008048.1 3136497 3138644 D oligopeptidase B 3136497..3138644 Sphingopyxis alaskensis RB2256 4082939 YP_618034.1 CDS Sala_2996 NC_008048.1 3138741 3140180 D beta-lactamase 3138741..3140180 Sphingopyxis alaskensis RB2256 4082940 YP_618035.1 CDS Sala_2997 NC_008048.1 3140165 3140776 R HAD family hydrolase complement(3140165..3140776) Sphingopyxis alaskensis RB2256 4082941 YP_618036.1 CDS rpmJ NC_008048.1 3140874 3140999 R smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif; 50S ribosomal protein L36 complement(3140874..3140999) Sphingopyxis alaskensis RB2256 4082942 YP_618037.1 CDS Sala_2999 NC_008048.1 3141195 3142649 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 complement(3141195..3142649) Sphingopyxis alaskensis RB2256 4082943 YP_618038.1 CDS Sala_3000 NC_008048.1 3142793 3143608 R ABC transporter complement(3142793..3143608) Sphingopyxis alaskensis RB2256 4082944 YP_618039.1 CDS Sala_3001 NC_008048.1 3143714 3145096 R phosphomannomutase complement(3143714..3145096) Sphingopyxis alaskensis RB2256 4082945 YP_618040.1 CDS Sala_3002 NC_008048.1 3145125 3146006 R chromosome partitioning ATPase complement(3145125..3146006) Sphingopyxis alaskensis RB2256 4082946 YP_618041.1 CDS Sala_3003 NC_008048.1 3146034 3146873 D pantoate--beta-alanine ligase 3146034..3146873 Sphingopyxis alaskensis RB2256 4082947 YP_618042.1 CDS Sala_3004 NC_008048.1 3146992 3147327 D hypothetical protein 3146992..3147327 Sphingopyxis alaskensis RB2256 4082948 YP_618043.1 CDS Sala_3005 NC_008048.1 3147394 3148545 R hypothetical protein complement(3147394..3148545) Sphingopyxis alaskensis RB2256 4082949 YP_618044.1 CDS Sala_3006 NC_008048.1 3148549 3149013 R endoribonuclease L-PSP complement(3148549..3149013) Sphingopyxis alaskensis RB2256 4082950 YP_618045.1 CDS Sala_3007 NC_008048.1 3149026 3149667 R hypothetical protein complement(3149026..3149667) Sphingopyxis alaskensis RB2256 4082951 YP_618046.1 CDS Sala_3008 NC_008048.1 3149664 3149927 R hypothetical protein complement(3149664..3149927) Sphingopyxis alaskensis RB2256 4082952 YP_618047.1 CDS Sala_3009 NC_008048.1 3150015 3150377 D response regulator receiver protein 3150015..3150377 Sphingopyxis alaskensis RB2256 4082953 YP_618048.1 CDS Sala_3010 NC_008048.1 3150547 3151710 R acyl-CoA dehydrogenase-like protein complement(3150547..3151710) Sphingopyxis alaskensis RB2256 4082954 YP_618049.1 CDS Sala_3011 NC_008048.1 3151728 3152789 R aspartyl/asparaginyl beta-hydroxylase complement(3151728..3152789) Sphingopyxis alaskensis RB2256 4082955 YP_618050.1 CDS Sala_3012 NC_008048.1 3152830 3155142 R UvrD/REP helicase complement(3152830..3155142) Sphingopyxis alaskensis RB2256 4082842 YP_618051.1 CDS Sala_3013 NC_008048.1 3155227 3155511 D hypothetical protein 3155227..3155511 Sphingopyxis alaskensis RB2256 4082843 YP_618052.1 CDS Sala_3014 NC_008048.1 3155863 3157629 R single-stranded-DNA-specific exonuclease RecJ complement(3155863..3157629) Sphingopyxis alaskensis RB2256 4082846 YP_618053.1 CDS Sala_3015 NC_008048.1 3157626 3159353 R membrane-flanked domain-containing protein complement(3157626..3159353) Sphingopyxis alaskensis RB2256 4082847 YP_618054.1 CDS Sala_3016 NC_008048.1 3159693 3161654 R beta-lactamase-like protein complement(3159693..3161654) Sphingopyxis alaskensis RB2256 4082848 YP_618055.1 CDS Sala_3017 NC_008048.1 3161717 3162205 D multimeric flavodoxin WrbA 3161717..3162205 Sphingopyxis alaskensis RB2256 4082849 YP_618056.1 CDS Sala_3018 NC_008048.1 3162330 3163361 R DNA polymerase III subunit delta complement(3162330..3163361) Sphingopyxis alaskensis RB2256 4082850 YP_618057.1 CDS Sala_3019 NC_008048.1 3163358 3163906 R hypothetical protein complement(3163358..3163906) Sphingopyxis alaskensis RB2256 4082851 YP_618058.1 CDS leuS NC_008048.1 3164036 3166585 R leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase complement(3164036..3166585) Sphingopyxis alaskensis RB2256 4082852 YP_618059.1 CDS Sala_3021 NC_008048.1 3166639 3167100 R hypothetical protein complement(3166639..3167100) Sphingopyxis alaskensis RB2256 4082853 YP_618060.1 CDS Sala_3022 NC_008048.1 3167379 3168092 D hypothetical protein 3167379..3168092 Sphingopyxis alaskensis RB2256 4082854 YP_618061.1 CDS Sala_3023 NC_008048.1 3168065 3168691 R thiamine monophosphate synthase complement(3168065..3168691) Sphingopyxis alaskensis RB2256 4082855 YP_618062.1 CDS Sala_3024 NC_008048.1 3168748 3169410 D hypothetical protein 3168748..3169410 Sphingopyxis alaskensis RB2256 4082856 YP_618063.1 CDS Sala_3026 NC_008048.1 3169757 3172177 D DEAD/DEAH box helicase 3169757..3172177 Sphingopyxis alaskensis RB2256 4082857 YP_618064.1 CDS Sala_3027 NC_008048.1 3172263 3173300 D hypothetical protein 3172263..3173300 Sphingopyxis alaskensis RB2256 4082858 YP_618065.1 CDS Sala_3028 NC_008048.1 3173340 3174056 D metallophosphoesterase 3173340..3174056 Sphingopyxis alaskensis RB2256 4083036 YP_618066.1 CDS Sala_3029 NC_008048.1 3174203 3176962 D TonB-dependent receptor 3174203..3176962 Sphingopyxis alaskensis RB2256 4083037 YP_618067.1 CDS Sala_3030 NC_008048.1 3177200 3177643 D succinate dehydrogenase, cytochrome b subunit 3177200..3177643 Sphingopyxis alaskensis RB2256 4083038 YP_618068.1 CDS Sala_3031 NC_008048.1 3177636 3178040 D succinate dehydrogenase, cytochrome b subunit 3177636..3178040 Sphingopyxis alaskensis RB2256 4083039 YP_618069.1 CDS sdhA NC_008048.1 3178042 3179856 D part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 3178042..3179856 Sphingopyxis alaskensis RB2256 4083040 YP_618070.1 CDS Sala_3033 NC_008048.1 3180084 3181139 R LacI family transcriptional regulator complement(3180084..3181139) Sphingopyxis alaskensis RB2256 4083041 YP_618071.1 CDS Sala_3034 NC_008048.1 3181350 3182003 D hypothetical protein 3181350..3182003 Sphingopyxis alaskensis RB2256 4083042 YP_618072.1 CDS Sala_3035 NC_008048.1 3182005 3182760 D 2-deoxy-D-gluconate 3-dehydrogenase 3182005..3182760 Sphingopyxis alaskensis RB2256 4083043 YP_618073.1 CDS Sala_3036 NC_008048.1 3182873 3183901 D PfkB protein 3182873..3183901 Sphingopyxis alaskensis RB2256 4083044 YP_618074.1 CDS Sala_3037 NC_008048.1 3183888 3185327 D carboxylesterase 3183888..3185327 Sphingopyxis alaskensis RB2256 4083045 YP_618075.1 CDS Sala_3038 NC_008048.1 3185434 3186405 R hypothetical protein complement(3185434..3186405) Sphingopyxis alaskensis RB2256 4083046 YP_618076.1 CDS Sala_3039 NC_008048.1 3186402 3186806 R cupin complement(3186402..3186806) Sphingopyxis alaskensis RB2256 4083047 YP_618077.1 CDS Sala_3040 NC_008048.1 3186803 3188182 R pectate lyase complement(3186803..3188182) Sphingopyxis alaskensis RB2256 4083048 YP_618078.1 CDS Sala_3041 NC_008048.1 3188443 3191238 D TonB-dependent receptor 3188443..3191238 Sphingopyxis alaskensis RB2256 4083049 YP_618079.1 CDS Sala_3042 NC_008048.1 3191320 3192933 D twin-arginine translocation pathway signal 3191320..3192933 Sphingopyxis alaskensis RB2256 4083050 YP_618080.1 CDS Sala_3043 NC_008048.1 3192930 3194432 R altronate dehydratase complement(3192930..3194432) Sphingopyxis alaskensis RB2256 4083051 YP_618081.1 CDS Sala_3044 NC_008048.1 3194476 3195258 D 2-keto-4-pentenoate hydratase 3194476..3195258 Sphingopyxis alaskensis RB2256 4083052 YP_618082.1 CDS Sala_3045 NC_008048.1 3195281 3196588 D major facilitator superfamily transporter 3195281..3196588 Sphingopyxis alaskensis RB2256 4083053 YP_618083.1 CDS Sala_3046 NC_008048.1 3196593 3198005 D catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate; functions in glucuronic and galacturonic metabolism; glucuronate isomerase 3196593..3198005 Sphingopyxis alaskensis RB2256 4083054 YP_618084.1 CDS Sala_3047 NC_008048.1 3198038 3199330 D mannitol dehydrogenase-like protein 3198038..3199330 Sphingopyxis alaskensis RB2256 4083055 YP_618085.1 CDS Sala_3048 NC_008048.1 3199432 3200364 R LysR family transcriptional regulator complement(3199432..3200364) Sphingopyxis alaskensis RB2256 4082897 YP_618086.1 CDS Sala_3049 NC_008048.1 3200419 3201912 D methylmalonate-semialdehyde dehydrogenase 3200419..3201912 Sphingopyxis alaskensis RB2256 4082898 YP_618087.1 CDS Sala_3050 NC_008048.1 3201977 3202486 D hypothetical protein 3201977..3202486 Sphingopyxis alaskensis RB2256 4082899 YP_618088.1 CDS Sala_3051 NC_008048.1 3202512 3202814 D hypothetical protein 3202512..3202814 Sphingopyxis alaskensis RB2256 4082900 YP_618089.1 CDS Sala_3052 NC_008048.1 3202819 3203211 D endoribonuclease L-PSP 3202819..3203211 Sphingopyxis alaskensis RB2256 4082901 YP_618090.1 CDS Sala_3053 NC_008048.1 3203208 3204353 D Acyl-CoA dehydrogenase 3203208..3204353 Sphingopyxis alaskensis RB2256 4082902 YP_618091.1 CDS Sala_3054 NC_008048.1 3204523 3205581 D enoyl-CoA hydratase/isomerase 3204523..3205581 Sphingopyxis alaskensis RB2256 4082903 YP_618092.1 CDS Sala_3055 NC_008048.1 3205657 3206439 D enoyl-CoA hydratase/isomerase 3205657..3206439 Sphingopyxis alaskensis RB2256 4082904 YP_618093.1 CDS Sala_3056 NC_008048.1 3206592 3207467 D 3-hydroxyisobutyrate dehydrogenase 3206592..3207467 Sphingopyxis alaskensis RB2256 4082905 YP_618094.1 CDS Sala_3057 NC_008048.1 3207538 3208074 D inorganic diphosphatase 3207538..3208074 Sphingopyxis alaskensis RB2256 4082906 YP_618095.1 CDS Sala_3058 NC_008048.1 3208086 3209393 R mechanosensitive ion channel protein MscS complement(3208086..3209393) Sphingopyxis alaskensis RB2256 4082907 YP_618096.1 CDS Sala_3059 NC_008048.1 3209390 3210592 R cystathionine beta-lyase complement(3209390..3210592) Sphingopyxis alaskensis RB2256 4082908 YP_618097.1 CDS Sala_3060 NC_008048.1 3210613 3211962 R chromate transporter complement(3210613..3211962) Sphingopyxis alaskensis RB2256 4082909 YP_618098.1 CDS Sala_3061 NC_008048.1 3212114 3212953 R 3-mercaptopyruvate sulfurtransferase complement(3212114..3212953) Sphingopyxis alaskensis RB2256 4082910 YP_618099.1 CDS Sala_3062 NC_008048.1 3213138 3214430 R hypothetical protein complement(3213138..3214430) Sphingopyxis alaskensis RB2256 4082911 YP_618100.1 CDS Sala_3063 NC_008048.1 3214550 3215020 D NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 3214550..3215020 Sphingopyxis alaskensis RB2256 4082912 YP_618101.1 CDS Sala_3064 NC_008048.1 3215066 3215476 D thioesterase superfamily protein 3215066..3215476 Sphingopyxis alaskensis RB2256 4082913 YP_618102.1 CDS Sala_3065 NC_008048.1 3215487 3215744 R hypothetical protein complement(3215487..3215744) Sphingopyxis alaskensis RB2256 4082914 YP_618103.1 CDS Sala_3066 NC_008048.1 3215778 3216272 R transposase, IS4 complement(3215778..3216272) Sphingopyxis alaskensis RB2256 4082915 YP_618104.1 CDS Sala_3067 NC_008048.1 3216609 3216848 R hypothetical protein complement(3216609..3216848) Sphingopyxis alaskensis RB2256 4083075 YP_618105.1 CDS Sala_3068 NC_008048.1 3217026 3219059 R 3-hydroxyacyl-CoA dehydrogenase complement(3217026..3219059) Sphingopyxis alaskensis RB2256 4083076 YP_618106.1 CDS Sala_3069 NC_008048.1 3219183 3220385 R beta-lactamase complement(3219183..3220385) Sphingopyxis alaskensis RB2256 4083077 YP_618107.1 CDS Sala_3070 NC_008048.1 3220396 3221199 R short-chain dehydrogenase/reductase SDR complement(3220396..3221199) Sphingopyxis alaskensis RB2256 4083078 YP_618108.1 CDS Sala_3071 NC_008048.1 3221199 3221975 R short-chain dehydrogenase/reductase SDR complement(3221199..3221975) Sphingopyxis alaskensis RB2256 4083079 YP_618109.1 CDS Sala_3072 NC_008048.1 3221972 3223138 R aminoglycoside phosphotransferase complement(3221972..3223138) Sphingopyxis alaskensis RB2256 4083080 YP_618110.1 CDS Sala_3073 NC_008048.1 3223188 3224279 R zinc-binding alcohol dehydrogenase complement(3223188..3224279) Sphingopyxis alaskensis RB2256 4083081 YP_618111.1 CDS Sala_3074 NC_008048.1 3224331 3225620 R acyl-CoA dehydrogenase-like protein complement(3224331..3225620) Sphingopyxis alaskensis RB2256 4083082 YP_618112.1 CDS Sala_3075 NC_008048.1 3225733 3227181 R Na+/melibiose symporter-like protein complement(3225733..3227181) Sphingopyxis alaskensis RB2256 4083083 YP_618113.1 CDS Sala_3076 NC_008048.1 3227190 3228047 R short-chain dehydrogenase/reductase SDR complement(3227190..3228047) Sphingopyxis alaskensis RB2256 4083084 YP_618114.1 CDS Sala_3077 NC_008048.1 3228218 3229399 D acyl-CoA dehydrogenase-like protein 3228218..3229399 Sphingopyxis alaskensis RB2256 4083085 YP_618115.1 CDS Sala_3078 NC_008048.1 3229508 3230626 D acyl-CoA dehydrogenase-like protein 3229508..3230626 Sphingopyxis alaskensis RB2256 4083086 YP_618116.1 CDS Sala_3079 NC_008048.1 3230783 3231586 D short-chain dehydrogenase/reductase SDR 3230783..3231586 Sphingopyxis alaskensis RB2256 4083087 YP_618117.1 CDS Sala_3080 NC_008048.1 3231680 3232198 D hypothetical protein 3231680..3232198 Sphingopyxis alaskensis RB2256 4083088 YP_618118.1 CDS Sala_3081 NC_008048.1 3232309 3234978 R phosphoenolpyruvate carboxylase complement(3232309..3234978) Sphingopyxis alaskensis RB2256 4083089 YP_618119.1 CDS Sala_3082 NC_008048.1 3235044 3235469 R lipoprotein-related protein complement(3235044..3235469) Sphingopyxis alaskensis RB2256 4083090 YP_618120.1 CDS Sala_3083 NC_008048.1 3235551 3236117 R HNH endonuclease complement(3235551..3236117) Sphingopyxis alaskensis RB2256 4083091 YP_618121.1 CDS Sala_3084 NC_008048.1 3236276 3237139 D glutamyl-tRNA synthetase 3236276..3237139 Sphingopyxis alaskensis RB2256 4083092 YP_618122.1 CDS Sala_3085 NC_008048.1 3237149 3237373 D hypothetical protein 3237149..3237373 Sphingopyxis alaskensis RB2256 4083093 YP_618123.1 CDS Sala_3086 NC_008048.1 3237510 3238091 D cobalamin adenosyltransferase 3237510..3238091 Sphingopyxis alaskensis RB2256 4083094 YP_618124.1 CDS Sala_3087 NC_008048.1 3238300 3239571 D hypothetical protein 3238300..3239571 Sphingopyxis alaskensis RB2256 4082823 YP_618125.1 CDS Sala_3088 NC_008048.1 3239573 3240559 D hypothetical protein 3239573..3240559 Sphingopyxis alaskensis RB2256 4082824 YP_618126.1 CDS Sala_3089 NC_008048.1 3240724 3241590 D 3-hydroxybutyryl-CoA dehydrogenase 3240724..3241590 Sphingopyxis alaskensis RB2256 4082825 YP_618127.1 CDS Sala_3090 NC_008048.1 3241661 3242155 D hypothetical protein 3241661..3242155 Sphingopyxis alaskensis RB2256 4082826 YP_618128.1 CDS Sala_3091 NC_008048.1 3242158 3242496 R hypothetical protein complement(3242158..3242496) Sphingopyxis alaskensis RB2256 4082827 YP_618129.1 CDS Sala_3092 NC_008048.1 3242493 3243104 R hypothetical protein complement(3242493..3243104) Sphingopyxis alaskensis RB2256 4082828 YP_618130.1 CDS Sala_3093 NC_008048.1 3243206 3244459 R Na+ dependent nucleoside transporter-like protein complement(3243206..3244459) Sphingopyxis alaskensis RB2256 4082829 YP_618131.1 CDS Sala_3094 NC_008048.1 3244486 3245262 D hypothetical protein 3244486..3245262 Sphingopyxis alaskensis RB2256 4082830 YP_618132.1 CDS Sala_3095 NC_008048.1 3245259 3246167 D catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 3245259..3246167 Sphingopyxis alaskensis RB2256 4082831 YP_618133.1 CDS Sala_3096 NC_008048.1 3246204 3246512 D hypothetical protein 3246204..3246512 Sphingopyxis alaskensis RB2256 4082832 YP_618134.1 CDS Sala_3097 NC_008048.1 3246516 3247424 D methylenetetrahydrofolate dehydrogenase (NADP+) 3246516..3247424 Sphingopyxis alaskensis RB2256 4082833 YP_618135.1 CDS Sala_3098 NC_008048.1 3247424 3248098 D hypothetical protein 3247424..3248098 Sphingopyxis alaskensis RB2256 4082834 YP_618136.1 CDS Sala_3099 NC_008048.1 3248095 3248724 D multiple antibiotic resistance (MarC)-like proteins 3248095..3248724 Sphingopyxis alaskensis RB2256 4082835 YP_618137.1 CDS Sala_3100 NC_008048.1 3248841 3249092 R hypothetical protein complement(3248841..3249092) Sphingopyxis alaskensis RB2256 4082836 YP_618138.1 CDS Sala_3101 NC_008048.1 3249126 3249818 R OmpA/MotB protein complement(3249126..3249818) Sphingopyxis alaskensis RB2256 4082837 YP_618139.1 CDS Sala_3102 NC_008048.1 3249956 3251356 D hypothetical protein 3249956..3251356 Sphingopyxis alaskensis RB2256 4082838 YP_618140.1 CDS Sala_3103 NC_008048.1 3251365 3251928 R hypothetical protein complement(3251365..3251928) Sphingopyxis alaskensis RB2256 4082839 YP_618141.1 CDS Sala_3104 NC_008048.1 3252053 3253288 R phosphoribosylamine--glycine ligase complement(3252053..3253288) Sphingopyxis alaskensis RB2256 4082840 YP_618142.1 CDS xseA NC_008048.1 3253329 3254756 D bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 3253329..3254756 Sphingopyxis alaskensis RB2256 4082841 YP_618143.1 CDS Sala_3106 NC_008048.1 3254834 3255046 D hypothetical protein 3254834..3255046 Sphingopyxis alaskensis RB2256 4082693 YP_618144.1 CDS Sala_3107 NC_008048.1 3255043 3255954 D peptidase M23B 3255043..3255954 Sphingopyxis alaskensis RB2256 4082694 YP_618145.1 CDS Sala_3108 NC_008048.1 3256229 3259291 D TonB-dependent receptor 3256229..3259291 Sphingopyxis alaskensis RB2256 4082695 YP_618146.1 CDS Sala_3109 NC_008048.1 3259420 3260445 R hypothetical protein complement(3259420..3260445) Sphingopyxis alaskensis RB2256 4082696 YP_618147.1 CDS Sala_3110 NC_008048.1 3260474 3261673 D aspartyl/asparaginyl beta-hydroxylase 3260474..3261673 Sphingopyxis alaskensis RB2256 4082697 YP_618148.1 CDS Sala_3111 NC_008048.1 3261769 3262083 D hypothetical protein 3261769..3262083 Sphingopyxis alaskensis RB2256 4082698 YP_618149.1 CDS Sala_3112 NC_008048.1 3262121 3262435 D hypothetical protein 3262121..3262435 Sphingopyxis alaskensis RB2256 4082699 YP_618150.1 CDS Sala_3113 NC_008048.1 3262670 3263314 R TetR family transcriptional regulator complement(3262670..3263314) Sphingopyxis alaskensis RB2256 4082700 YP_618151.1 CDS Sala_3114 NC_008048.1 3263368 3264795 D RND efflux system, outer membrane lipoprotein, NodT 3263368..3264795 Sphingopyxis alaskensis RB2256 4082701 YP_618152.1 CDS Sala_3115 NC_008048.1 3264792 3265931 D secretion protein HlyD 3264792..3265931 Sphingopyxis alaskensis RB2256 4082702 YP_618153.1 CDS Sala_3117 NC_008048.1 3266093 3267643 D EmrB/QacA family drug resistance transporter 3266093..3267643 Sphingopyxis alaskensis RB2256 4082703 YP_618154.1 CDS Sala_3118 NC_008048.1 3267709 3269604 D ABC transporter 3267709..3269604 Sphingopyxis alaskensis RB2256 4082704 YP_618155.1 CDS Sala_3119 NC_008048.1 3269701 3270792 D 4-hydroxyphenylpyruvate dioxygenase 3269701..3270792 Sphingopyxis alaskensis RB2256 4082705 YP_618156.1 CDS Sala_3120 NC_008048.1 3270789 3271334 D glyoxalase/bleomycin resistance protein/dioxygenase 3270789..3271334 Sphingopyxis alaskensis RB2256 4082706 YP_618157.1 CDS Sala_3121 NC_008048.1 3271431 3271787 R hypothetical protein complement(3271431..3271787) Sphingopyxis alaskensis RB2256 4082707 YP_618158.1 CDS Sala_3122 NC_008048.1 3272042 3274363 D SARP family transcriptional regulator 3272042..3274363 Sphingopyxis alaskensis RB2256 4082708 YP_618159.1 CDS purH NC_008048.1 3274335 3275993 R involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase complement(3274335..3275993) Sphingopyxis alaskensis RB2256 4082709 YP_618160.1 CDS Sala_3124 NC_008048.1 3276105 3277133 R 3-phytase complement(3276105..3277133) Sphingopyxis alaskensis RB2256 4082710 YP_618161.1 CDS Sala_3125 NC_008048.1 3277319 3279676 D TonB-dependent receptor 3277319..3279676 Sphingopyxis alaskensis RB2256 4082711 YP_618162.1 CDS Sala_3126 NC_008048.1 3279688 3279945 D hypothetical protein 3279688..3279945 Sphingopyxis alaskensis RB2256 4082712 YP_618163.1 CDS Sala_3127 NC_008048.1 3280090 3281868 R heparinase II/III-like protein complement(3280090..3281868) Sphingopyxis alaskensis RB2256 4082383 YP_618164.1 CDS Sala_3128 NC_008048.1 3281872 3282543 R ribulose-phosphate 3-epimerase complement(3281872..3282543) Sphingopyxis alaskensis RB2256 4082384 YP_618165.1 CDS Sala_3129 NC_008048.1 3282561 3282812 R hypothetical protein complement(3282561..3282812) Sphingopyxis alaskensis RB2256 4082385 YP_618166.1 CDS Sala_3130 NC_008048.1 3282829 3283347 R NAD metabolism ATPase/kinase-like protein complement(3282829..3283347) Sphingopyxis alaskensis RB2256 4082386 YP_618167.1 CDS Sala_3131 NC_008048.1 3283344 3283913 R nicotinamide mononucleotide transporter complement(3283344..3283913) Sphingopyxis alaskensis RB2256 4082387 YP_618168.1 CDS Sala_3132 NC_008048.1 3283910 3284893 R squalene/phytoene synthase complement(3283910..3284893) Sphingopyxis alaskensis RB2256 4082388 YP_618169.1 CDS Sala_3133 NC_008048.1 3284893 3285474 R hypothetical protein complement(3284893..3285474) Sphingopyxis alaskensis RB2256 4082389 YP_618170.1 CDS Sala_3134 NC_008048.1 3285510 3286988 R amine oxidase complement(3285510..3286988) Sphingopyxis alaskensis RB2256 4082390 YP_618171.1 CDS Sala_3135 NC_008048.1 3286985 3288142 R lycopene cyclase complement(3286985..3288142) Sphingopyxis alaskensis RB2256 4082391 YP_618172.1 CDS Sala_3136 NC_008048.1 3288216 3288977 D sterol desaturase 3288216..3288977 Sphingopyxis alaskensis RB2256 4082392 YP_618173.1 CDS Sala_3137 NC_008048.1 3288943 3289332 D hypothetical protein 3288943..3289332 Sphingopyxis alaskensis RB2256 4082393 YP_618174.1 CDS Sala_3138 NC_008048.1 3289366 3291087 D apolipoprotein N-acyltransferase 3289366..3291087 Sphingopyxis alaskensis RB2256 4082394 YP_618175.1 CDS Sala_3139 NC_008048.1 3291137 3292357 D catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 3291137..3292357 Sphingopyxis alaskensis RB2256 4082395 YP_618176.1 CDS trmB NC_008048.1 3292374 3293153 D tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 3292374..3293153 Sphingopyxis alaskensis RB2256 4082396 YP_618177.1 CDS Sala_3141 NC_008048.1 3293281 3293616 R hypothetical protein complement(3293281..3293616) Sphingopyxis alaskensis RB2256 4082397 YP_618178.1 CDS Sala_3142 NC_008048.1 3293700 3294626 D LysR family transcriptional regulator 3293700..3294626 Sphingopyxis alaskensis RB2256 4082398 YP_618179.1 CDS Sala_3143 NC_008048.1 3294749 3295516 D hypothetical protein 3294749..3295516 Sphingopyxis alaskensis RB2256 4082399 YP_618180.1 CDS Sala_3144 NC_008048.1 3295572 3296123 R hypothetical protein complement(3295572..3296123) Sphingopyxis alaskensis RB2256 4082400 YP_618181.1 CDS Sala_3145 NC_008048.1 3296312 3297448 D catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 3296312..3297448 Sphingopyxis alaskensis RB2256 4082401 YP_618182.1 CDS Sala_3146 NC_008048.1 3297558 3298325 R catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF complement(3297558..3298325) Sphingopyxis alaskensis RB2256 4082482 YP_618183.1 CDS Sala_3147 NC_008048.1 3298441 3299175 R catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase complement(3298441..3299175) Sphingopyxis alaskensis RB2256 4082483 YP_618184.1 CDS hisH NC_008048.1 3299163 3299771 R with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH complement(3299163..3299771) Sphingopyxis alaskensis RB2256 4082484 YP_618185.1 CDS hisB NC_008048.1 3299781 3300368 R catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase complement(3299781..3300368) Sphingopyxis alaskensis RB2256 4082485 YP_618186.1 CDS Sala_3150 NC_008048.1 3300456 3300938 D hypothetical protein 3300456..3300938 Sphingopyxis alaskensis RB2256 4082486 YP_618187.1 CDS Sala_3151 NC_008048.1 3300943 3301254 D hypothetical protein 3300943..3301254 Sphingopyxis alaskensis RB2256 4082487 YP_618188.1 CDS fumC NC_008048.1 3301251 3302666 D class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 3301251..3302666 Sphingopyxis alaskensis RB2256 4082488 YP_618189.1 CDS Sala_3153 NC_008048.1 3302688 3303056 D hypothetical protein 3302688..3303056 Sphingopyxis alaskensis RB2256 4082489 YP_618190.1 CDS Sala_3154 NC_008048.1 3303136 3303702 R hypothetical protein complement(3303136..3303702) Sphingopyxis alaskensis RB2256 4082490 YP_618191.1 CDS gmk NC_008048.1 3303763 3304425 D Essential for recycling GMP and indirectly, cGMP; guanylate kinase 3303763..3304425 Sphingopyxis alaskensis RB2256 4082491 YP_618192.1 CDS Sala_3156 NC_008048.1 3304445 3304897 R thioesterase superfamily protein complement(3304445..3304897) Sphingopyxis alaskensis RB2256 4082492 YP_618193.1 CDS Sala_3157 NC_008048.1 3304899 3305762 R short-chain dehydrogenase/reductase SDR complement(3304899..3305762) Sphingopyxis alaskensis RB2256 4082493 YP_618194.1 CDS Sala_3158 NC_008048.1 3305804 3306973 R Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase complement(3305804..3306973) Sphingopyxis alaskensis RB2256 4082494 YP_618195.1 CDS Sala_3159 NC_008048.1 3307074 3308228 R acyl-CoA dehydrogenase-like protein complement(3307074..3308228) Sphingopyxis alaskensis RB2256 4082495 YP_618196.1 CDS Sala_3160 NC_008048.1 3308629 3309498 D senescence marker protein-30 3308629..3309498 Sphingopyxis alaskensis RB2256 4082496 YP_618197.1 CDS Sala_3161 NC_008048.1 3309753 3311939 D peptidyl-dipeptidase Dcp 3309753..3311939 Sphingopyxis alaskensis RB2256 4082497 YP_618198.1 CDS Sala_3162 NC_008048.1 3312213 3312830 R hypothetical protein complement(3312213..3312830) Sphingopyxis alaskensis RB2256 4082498 YP_618199.1 CDS Sala_3163 NC_008048.1 3312867 3313274 R glyoxalase/bleomycin resistance protein/dioxygenase complement(3312867..3313274) Sphingopyxis alaskensis RB2256 4082499 YP_618200.1 CDS Sala_3164 NC_008048.1 3313383 3313982 R cyclic nucleotide-binding protein complement(3313383..3313982) Sphingopyxis alaskensis RB2256 4082500 YP_618201.1 CDS Sala_3165 NC_008048.1 3314648 3315829 D Rieske (2Fe-2S) protein 3314648..3315829 Sphingopyxis alaskensis RB2256 4082501 YP_618202.1 CDS Sala_3166 NC_008048.1 3315826 3317445 D FAD dependent oxidoreductase 3315826..3317445 Sphingopyxis alaskensis RB2256 4082502 YP_618203.1 CDS Sala_3167 NC_008048.1 3317407 3318717 R amino acid permease complement(3317407..3318717) Sphingopyxis alaskensis RB2256 4082503 YP_618204.1 CDS Sala_3168 NC_008048.1 3318722 3321109 R TonB-dependent receptor complement(3318722..3321109) Sphingopyxis alaskensis RB2256 4082504 YP_618205.1 CDS Sala_3169 NC_008048.1 3321409 3323223 R hypothetical protein complement(3321409..3323223) Sphingopyxis alaskensis RB2256 4082505 YP_618206.1 CDS Sala_3170 NC_008048.1 3323233 3324840 R DSBA oxidoreductase complement(3323233..3324840) Sphingopyxis alaskensis RB2256 4082506 YP_618207.1 CDS Sala_3171 NC_008048.1 3324897 3326300 R peptidase M48, Ste24p complement(3324897..3326300) Sphingopyxis alaskensis RB2256 4082507 YP_618208.1 CDS Sala_3172 NC_008048.1 3326431 3329076 R ribonuclease complement(3326431..3329076) Sphingopyxis alaskensis RB2256 4082508 YP_618209.1 CDS Sala_3173 NC_008048.1 3329511 3330578 D N-acetylmuramoyl-L-alanine amidase 3329511..3330578 Sphingopyxis alaskensis RB2256 4082509 YP_618210.1 CDS Sala_3174 NC_008048.1 3330613 3331866 D FAD-linked oxidoreductase 3330613..3331866 Sphingopyxis alaskensis RB2256 4082510 YP_618211.1 CDS Sala_3175 NC_008048.1 3331863 3333008 D threonine aldolase family protein 3331863..3333008 Sphingopyxis alaskensis RB2256 4082511 YP_618212.1 CDS Sala_3176 NC_008048.1 3333073 3335589 D glycosyl transferase family protein 3333073..3335589 Sphingopyxis alaskensis RB2256 4082512 YP_618213.1 CDS Sala_3177 NC_008048.1 3335668 3336795 D peptide chain release factor 2 3335668..3336795 Sphingopyxis alaskensis RB2256 4082513 YP_618214.1 CDS Sala_3178 NC_008048.1 3336795 3337514 D type 11 methyltransferase 3336795..3337514 Sphingopyxis alaskensis RB2256 4082514 YP_618215.1 CDS Sala_3179 NC_008048.1 3337609 3337974 R hypothetical protein complement(3337609..3337974) Sphingopyxis alaskensis RB2256 4082515 YP_618216.1 CDS Sala_3180 NC_008048.1 3337962 3338711 R UBA/THIF-type NAD/FAD binding fold complement(3337962..3338711) Sphingopyxis alaskensis RB2256 4082516 YP_618217.1 CDS Sala_3181 NC_008048.1 3338711 3339229 R deoxyuridine 5'-triphosphate nucleotidohydrolase complement(3338711..3339229) Sphingopyxis alaskensis RB2256 4082517 YP_618218.1 CDS Sala_3182 NC_008048.1 3339222 3340484 R phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase complement(3339222..3340484) Sphingopyxis alaskensis RB2256 4082518 YP_618219.1 CDS Sala_3183 NC_008048.1 3340488 3340784 R putative CcdB-like protein complement(3340488..3340784) Sphingopyxis alaskensis RB2256 4082519 YP_618220.1 CDS Sala_3184 NC_008048.1 3340785 3341030 R post-segregation antitoxin CcdA complement(3340785..3341030) Sphingopyxis alaskensis RB2256 4082520 YP_618221.1 CDS Sala_3185 NC_008048.1 3341075 3342619 R 2-polyprenylphenol 6-hydroxylase complement(3341075..3342619) Sphingopyxis alaskensis RB2256 4082402 YP_618222.1 CDS Sala_3186 NC_008048.1 3342744 3343511 R UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase LpxD complement(3342744..3343511) Sphingopyxis alaskensis RB2256 4082403 YP_618223.1 CDS Sala_3187 NC_008048.1 3343577 3344389 D Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 3343577..3344389 Sphingopyxis alaskensis RB2256 4082404 YP_618224.1 CDS rpsT NC_008048.1 3344579 3344842 D binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 3344579..3344842 Sphingopyxis alaskensis RB2256 4082405 Sala_R0001 tRNA Sala_R0001 NC_008048.1 48696 48770 D tRNA-Gln 48696..48770 Sphingopyxis alaskensis RB2256 4081541 Sala_R0002 tRNA Sala_R0002 NC_008048.1 316344 316430 R tRNA-Leu complement(316344..316430) Sphingopyxis alaskensis RB2256 4082875 Sala_R0003 tRNA Sala_R0003 NC_008048.1 456132 456208 R tRNA-Met complement(456132..456208) Sphingopyxis alaskensis RB2256 4082992 Sala_R0004 tRNA Sala_R0004 NC_008048.1 602240 602316 D tRNA-Arg 602240..602316 Sphingopyxis alaskensis RB2256 4080621 Sala_R0005 tRNA Sala_R0005 NC_008048.1 765277 765350 D tRNA-Gly 765277..765350 Sphingopyxis alaskensis RB2256 4081167 Sala_R0006 tRNA Sala_R0006 NC_008048.1 791522 791606 D tRNA-Leu 791522..791606 Sphingopyxis alaskensis RB2256 4080427 Sala_R0007 tRNA Sala_R0007 NC_008048.1 806925 806999 D tRNA-Val 806925..806999 Sphingopyxis alaskensis RB2256 4080349 Sala_R0008 tRNA Sala_R0008 NC_008048.1 850623 850707 D tRNA-Leu 850623..850707 Sphingopyxis alaskensis RB2256 4080051 Sala_R0009 tRNA Sala_R0009 NC_008048.1 854471 854556 D tRNA-Tyr 854471..854556 Sphingopyxis alaskensis RB2256 4080056 Sala_R0010 tRNA Sala_R0010 NC_008048.1 1089483 1089558 D tRNA-Ala 1089483..1089558 Sphingopyxis alaskensis RB2256 4080781 Sala_R0011 tRNA Sala_R0011 NC_008048.1 1125685 1125774 R tRNA-Ser complement(1125685..1125774) Sphingopyxis alaskensis RB2256 4081573 Sala_R0012 tRNA Sala_R0012 NC_008048.1 1306508 1306597 R tRNA-Ser complement(1306508..1306597) Sphingopyxis alaskensis RB2256 4080268 Sala_R0013 tRNA Sala_R0013 NC_008048.1 1342805 1342881 D tRNA-Pro 1342805..1342881 Sphingopyxis alaskensis RB2256 4082537 Sala_R0014 tRNA Sala_R0014 NC_008048.1 1343474 1343549 R tRNA-Met complement(1343474..1343549) Sphingopyxis alaskensis RB2256 4082538 Sala_R0015 tRNA Sala_R0015 NC_008048.1 1381901 1381977 R tRNA-Asp complement(1381901..1381977) Sphingopyxis alaskensis RB2256 4082248 Sala_R0016 tRNA Sala_R0016 NC_008048.1 1396698 1396774 D tRNA-Pro 1396698..1396774 Sphingopyxis alaskensis RB2256 4081005 Sala_R0017 tRNA Sala_R0017 NC_008048.1 1398423 1398497 D tRNA-Val 1398423..1398497 Sphingopyxis alaskensis RB2256 4081008 Sala_R0018 tRNA Sala_R0018 NC_008048.1 1401100 1401192 R tRNA-Ser complement(1401100..1401192) Sphingopyxis alaskensis RB2256 4082806 Sala_R0019 tRNA Sala_R0019 NC_008048.1 1554964 1555039 R tRNA-Ala complement(1554964..1555039) Sphingopyxis alaskensis RB2256 4081168 Sala_R0020 tRNA Sala_R0020 NC_008048.1 1561950 1562036 D tRNA-Leu 1561950..1562036 Sphingopyxis alaskensis RB2256 4081176 Sala_R0021 tRNA Sala_R0021 NC_008048.1 1587403 1587479 R tRNA-His complement(1587403..1587479) Sphingopyxis alaskensis RB2256 4080035 Sala_R0022 tRNA Sala_R0022 NC_008048.1 1619704 1619779 D tRNA-Lys 1619704..1619779 Sphingopyxis alaskensis RB2256 4082722 Sala_R0024 tRNA Sala_R0024 NC_008048.1 1686630 1686704 R tRNA-Thr complement(1686630..1686704) Sphingopyxis alaskensis RB2256 4082760 Sala_R0025 tRNA Sala_R0025 NC_008048.1 1688353 1688443 D tRNA-Ser 1688353..1688443 Sphingopyxis alaskensis RB2256 4082763 Sala_R0026 tRNA Sala_R0026 NC_008048.1 1688559 1688635 R tRNA-Arg complement(1688559..1688635) Sphingopyxis alaskensis RB2256 4082764 Sala_R0027 tRNA Sala_R0027 NC_008048.1 1713023 1713098 D tRNA-Lys 1713023..1713098 Sphingopyxis alaskensis RB2256 4080709 Sala_R0028 tRNA Sala_R0028 NC_008048.1 1742368 1742442 D tRNA-Asn 1742368..1742442 Sphingopyxis alaskensis RB2256 4080965 Sala_R0029 tRNA Sala_R0029 NC_008048.1 1806373 1806449 D tRNA-Pro 1806373..1806449 Sphingopyxis alaskensis RB2256 4081293 Sala_R0030 tRNA Sala_R0030 NC_008048.1 1886679 1886755 R tRNA-Arg complement(1886679..1886755) Sphingopyxis alaskensis RB2256 4082256 Sala_R0031 tRNA Sala_R0031 NC_008048.1 1957262 1957337 R tRNA-Trp complement(1957262..1957337) Sphingopyxis alaskensis RB2256 4080176 Sala_R0034 tRNA Sala_R0034 NC_008048.1 2016678 2016753 R tRNA-Phe complement(2016678..2016753) Sphingopyxis alaskensis RB2256 4082770 Sala_R0035 tRNA Sala_R0035 NC_008048.1 2180501 2180576 D tRNA-Thr 2180501..2180576 Sphingopyxis alaskensis RB2256 4080009 Sala_R0036 tRNA Sala_R0036 NC_008048.1 2205868 2205943 R tRNA-Val complement(2205868..2205943) Sphingopyxis alaskensis RB2256 4080072 Sala_R0037 tRNA Sala_R0037 NC_008048.1 2238706 2238781 D tRNA-Thr 2238706..2238781 Sphingopyxis alaskensis RB2256 4080110 Sala_R0038 tRNA Sala_R0038 NC_008048.1 2239274 2239360 R tRNA-Leu complement(2239274..2239360) Sphingopyxis alaskensis RB2256 4080112 Sala_R0039 tRNA Sala_R0039 NC_008048.1 2379346 2379419 R tRNA-Cys complement(2379346..2379419) Sphingopyxis alaskensis RB2256 4080564 Sala_R0040 tRNA Sala_R0040 NC_008048.1 2437773 2437846 R tRNA-Gln complement(2437773..2437846) Sphingopyxis alaskensis RB2256 4080594 Sala_R0042 tRNA Sala_R0042 NC_008048.1 2809614 2809688 R tRNA-Gly complement(2809614..2809688) Sphingopyxis alaskensis RB2256 4081872 Sala_R0043 tRNA Sala_R0043 NC_008048.1 2847706 2847782 R tRNA-Met complement(2847706..2847782) Sphingopyxis alaskensis RB2256 4081915 Sala_R0046 tRNA Sala_R0046 NC_008048.1 2851208 2851283 R tRNA-Ala complement(2851208..2851283) Sphingopyxis alaskensis RB2256 4081918 Sala_R0047 tRNA Sala_R0047 NC_008048.1 2851308 2851384 R tRNA-Ile complement(2851308..2851384) Sphingopyxis alaskensis RB2256 4081919 Sala_R0049 tRNA Sala_R0049 NC_008048.1 2931415 2931488 D tRNA-Gly 2931415..2931488 Sphingopyxis alaskensis RB2256 4080337 Sala_R0050 tRNA Sala_R0050 NC_008048.1 3045924 3046000 D tRNA-Arg 3045924..3046000 Sphingopyxis alaskensis RB2256 4080688 Sala_R0051 tRNA Sala_R0051 NC_008048.1 3155557 3155631 R tRNA-Glu complement(3155557..3155631) Sphingopyxis alaskensis RB2256 4082844 Sala_R0052 tRNA Sala_R0052 NC_008048.1 3155683 3155758 R tRNA-Glu complement(3155683..3155758) Sphingopyxis alaskensis RB2256 4082845 Sala_R0044 rRNA Sala_R0044 NC_008048.1 2847888 2848002 R 5S ribosomal RNA complement(2847888..2848002) Sphingopyxis alaskensis RB2256 4081916 Sala_R0045 rRNA Sala_R0045 NC_008048.1 2848120 2850903 R 23S ribosomal RNA complement(2848120..2850903) Sphingopyxis alaskensis RB2256 4081917 Sala_R0048 rRNA Sala_R0048 NC_008048.1 2851569 2853052 R 16S ribosomal RNA complement(2851569..2853052) Sphingopyxis alaskensis RB2256 4082406