-- dump date 20140620_072053 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_611121.1 98152872 4074355 complement(290..970) 1 NC_008036.1 hypothetical protein 970 4074355 Sala_3189 Sphingopyxis alaskensis RB2256 hypothetical protein YP_611121.1 290 R 317655 CDS YP_611122.1 98152873 4074356 complement(1028..1795) 1 NC_008036.1 hypothetical protein 1795 4074356 Sala_3190 Sphingopyxis alaskensis RB2256 hypothetical protein YP_611122.1 1028 R 317655 CDS YP_611123.1 98152874 4074357 complement(1803..4727) 1 NC_008036.1 MobA/MobL family protein; conjugal transfer relaxase TraA 4727 4074357 Sala_3191 Sphingopyxis alaskensis RB2256 conjugal transfer relaxase TraA YP_611123.1 1803 R 317655 CDS YP_611124.1 98152875 4074358 4862..5167 1 NC_008036.1 hypothetical protein 5167 4074358 Sala_3192 Sphingopyxis alaskensis RB2256 hypothetical protein YP_611124.1 4862 D 317655 CDS YP_611125.1 98152876 4074359 5145..5417 1 NC_008036.1 conjugal transfer TraD 5417 4074359 Sala_3193 Sphingopyxis alaskensis RB2256 conjugal transfer TraD YP_611125.1 5145 D 317655 CDS YP_611126.1 98152877 4074360 5726..6991 1 NC_008036.1 uncharacterized membrane-anchored protein 6991 4074360 Sala_3194 Sphingopyxis alaskensis RB2256 uncharacterized membrane-anchored protein YP_611126.1 5726 D 317655 CDS YP_611127.1 98152878 4074361 7141..8589 1 NC_008036.1 two component, sigma54 specific, Fis family transcriptional regulator 8589 4074361 Sala_3195 Sphingopyxis alaskensis RB2256 two component, sigma54 specific, Fis family transcriptional regulator YP_611127.1 7141 D 317655 CDS YP_611128.1 98152879 4074362 8592..8852 1 NC_008036.1 hypothetical protein 8852 4074362 Sala_3196 Sphingopyxis alaskensis RB2256 hypothetical protein YP_611128.1 8592 D 317655 CDS YP_611129.1 98152880 4074335 9081..10043 1 NC_008036.1 NADH ubiquinone oxidoreductase, 20 kDa subunit 10043 4074335 Sala_3197 Sphingopyxis alaskensis RB2256 NADH ubiquinone oxidoreductase, 20 kDa subunit YP_611129.1 9081 D 317655 CDS YP_611130.1 98152881 4074336 10057..11700 1 NC_008036.1 nickel-dependent hydrogenase, large subunit 11700 4074336 Sala_3198 Sphingopyxis alaskensis RB2256 nickel-dependent hydrogenase, large subunit YP_611130.1 10057 D 317655 CDS YP_611131.1 98152882 4074337 11772..12170 1 NC_008036.1 hypothetical protein 12170 4074337 Sala_3199 Sphingopyxis alaskensis RB2256 hypothetical protein YP_611131.1 11772 D 317655 CDS YP_611132.1 98152883 4074338 12143..12499 1 NC_008036.1 hypothetical protein 12499 4074338 Sala_3200 Sphingopyxis alaskensis RB2256 hypothetical protein YP_611132.1 12143 D 317655 CDS YP_611133.1 98152884 4074339 12487..12972 1 NC_008036.1 hydrogenase maturation protease 12972 4074339 Sala_3201 Sphingopyxis alaskensis RB2256 hydrogenase maturation protease YP_611133.1 12487 D 317655 CDS YP_611134.1 98152885 4074340 12976..13287 1 NC_008036.1 hypothetical protein 13287 4074340 Sala_3202 Sphingopyxis alaskensis RB2256 hypothetical protein YP_611134.1 12976 D 317655 CDS YP_611135.1 98152886 4074341 13385..14383 1 NC_008036.1 hypothetical protein 14383 4074341 Sala_3203 Sphingopyxis alaskensis RB2256 hypothetical protein YP_611135.1 13385 D 317655 CDS YP_611136.1 98152887 4074342 14390..14602 1 NC_008036.1 hypothetical protein 14602 4074342 Sala_3204 Sphingopyxis alaskensis RB2256 hypothetical protein YP_611136.1 14390 D 317655 CDS YP_611137.1 98152888 4074343 14771..15706 1 NC_008036.1 nitrogen-fixing NifU-like 15706 4074343 Sala_3205 Sphingopyxis alaskensis RB2256 nitrogen-fixing NifU-like YP_611137.1 14771 D 317655 CDS YP_611138.1 98152889 4074344 15622..16881 1 NC_008036.1 NHL repeat-containing protein 16881 4074344 Sala_3206 Sphingopyxis alaskensis RB2256 NHL repeat-containing protein YP_611138.1 15622 D 317655 CDS YP_611139.1 98152890 4074345 16863..19244 1 NC_008036.1 (NiFe) hydrogenase maturation protein HypF 19244 4074345 Sala_3207 Sphingopyxis alaskensis RB2256 (NiFe) hydrogenase maturation protein HypF YP_611139.1 16863 D 317655 CDS YP_611140.1 98152891 4074346 19235..19531 1 NC_008036.1 hydrogenase assembly chaperone hypC/hupF 19531 4074346 Sala_3208 Sphingopyxis alaskensis RB2256 hydrogenase assembly chaperone hypC/hupF YP_611140.1 19235 D 317655 CDS YP_611141.1 98152892 4074347 19525..20211 1 NC_008036.1 phosphoheptose isomerase 20211 4074347 Sala_3209 Sphingopyxis alaskensis RB2256 phosphoheptose isomerase YP_611141.1 19525 D 317655 CDS YP_611142.1 98152893 4074348 20208..21341 1 NC_008036.1 hydrogenase expression/formation protein HypD 21341 4074348 Sala_3210 Sphingopyxis alaskensis RB2256 hydrogenase expression/formation protein HypD YP_611142.1 20208 D 317655 CDS YP_611143.1 98152894 4074349 21338..22387 1 NC_008036.1 hydrogenase expression/formation protein HypE 22387 4074349 Sala_3211 Sphingopyxis alaskensis RB2256 hydrogenase expression/formation protein HypE YP_611143.1 21338 D 317655 CDS YP_611144.1 98152895 4074350 22403..23122 1 NC_008036.1 high-affinity nickel-transporter 23122 4074350 Sala_3212 Sphingopyxis alaskensis RB2256 high-affinity nickel-transporter YP_611144.1 22403 D 317655 CDS YP_611145.1 98152896 4074351 23122..23364 1 NC_008036.1 zinc finger protein 23364 4074351 Sala_3213 Sphingopyxis alaskensis RB2256 zinc finger protein YP_611145.1 23122 D 317655 CDS YP_611146.1 98152897 4074352 23364..24275 1 NC_008036.1 hydrogenase accessory protein HypB 24275 4074352 Sala_3214 Sphingopyxis alaskensis RB2256 hydrogenase accessory protein HypB YP_611146.1 23364 D 317655 CDS YP_611147.1 98152898 4074353 24263..24574 1 NC_008036.1 hypothetical protein 24574 4074353 Sala_3215 Sphingopyxis alaskensis RB2256 hypothetical protein YP_611147.1 24263 D 317655 CDS YP_611148.1 98152899 4074354 24760..24966 1 NC_008036.1 phage transcriptional regulator, AlpA 24966 4074354 Sala_3216 Sphingopyxis alaskensis RB2256 phage transcriptional regulator, AlpA YP_611148.1 24760 D 317655 CDS YP_611149.1 98152900 4074333 25814..26143 1 NC_008036.1 hypothetical protein 26143 4074333 Sala_3217 Sphingopyxis alaskensis RB2256 hypothetical protein YP_611149.1 25814 D 317655 CDS YP_611150.1 98152901 4074334 complement(26638..28125) 1 NC_008036.1 AMP-dependent synthetase and ligase 28125 4074334 Sala_3218 Sphingopyxis alaskensis RB2256 AMP-dependent synthetase and ligase YP_611150.1 26638 R 317655 CDS YP_615060.1 103485499 4082956 173..1534 1 NC_008048.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 1534 dnaA 4082956 dnaA Sphingopyxis alaskensis RB2256 chromosomal replication initiation protein YP_615060.1 173 D 317655 CDS YP_615061.1 103485500 4082957 complement(1682..2353) 1 NC_008048.1 glutathione S-transferase-like protein 2353 4082957 Sala_0002 Sphingopyxis alaskensis RB2256 glutathione S-transferase-like protein YP_615061.1 1682 R 317655 CDS YP_615062.1 103485501 4083134 complement(2549..3208) 1 NC_008048.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 3208 engB 4083134 engB Sphingopyxis alaskensis RB2256 ribosome biogenesis GTP-binding protein YsxC YP_615062.1 2549 R 317655 CDS YP_615063.1 103485502 4083135 complement(3205..4959) 1 NC_008048.1 functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; putative inner membrane protein translocase component YidC 4959 4083135 Sala_0004 Sphingopyxis alaskensis RB2256 putative inner membrane protein translocase component YidC YP_615063.1 3205 R 317655 CDS YP_615064.1 103485503 4083136 complement(5006..5218) 1 NC_008048.1 hypothetical protein 5218 4083136 Sala_0005 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615064.1 5006 R 317655 CDS YP_615065.1 103485504 4083137 complement(5439..6161) 1 NC_008048.1 ribonuclease P protein component 6161 4083137 Sala_0006 Sphingopyxis alaskensis RB2256 ribonuclease P protein component YP_615065.1 5439 R 317655 CDS YP_615066.1 103485505 4083138 6361..6693 1 NC_008048.1 entericidin EcnAB 6693 4083138 Sala_0007 Sphingopyxis alaskensis RB2256 entericidin EcnAB YP_615066.1 6361 D 317655 CDS YP_615067.1 103485506 4083139 complement(6735..7511) 1 NC_008048.1 alpha/beta hydrolase 7511 4083139 Sala_0008 Sphingopyxis alaskensis RB2256 alpha/beta hydrolase YP_615067.1 6735 R 317655 CDS YP_615068.1 103485507 4083140 complement(7591..8253) 1 NC_008048.1 glutathione S-transferase-like protein 8253 4083140 Sala_0009 Sphingopyxis alaskensis RB2256 glutathione S-transferase-like protein YP_615068.1 7591 R 317655 CDS YP_615069.1 103485508 4083141 complement(8250..8702) 1 NC_008048.1 hypothetical protein 8702 4083141 Sala_0010 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615069.1 8250 R 317655 CDS YP_615070.1 103485509 4083142 complement(8689..9192) 1 NC_008048.1 3-demethylubiquinone-9 3-methyltransferase 9192 4083142 Sala_0011 Sphingopyxis alaskensis RB2256 3-demethylubiquinone-9 3-methyltransferase YP_615070.1 8689 R 317655 CDS YP_615071.1 103485510 4083143 complement(9228..10031) 1 NC_008048.1 glyoxalase/bleomycin resistance protein/dioxygenase 10031 4083143 Sala_0012 Sphingopyxis alaskensis RB2256 glyoxalase/bleomycin resistance protein/dioxygenase YP_615071.1 9228 R 317655 CDS YP_615072.1 103485511 4083144 complement(10071..10370) 1 NC_008048.1 hypothetical protein 10370 4083144 Sala_0013 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615072.1 10071 R 317655 CDS YP_615073.1 103485512 4083145 complement(10373..11044) 1 NC_008048.1 glutathione S-transferase-like protein 11044 4083145 Sala_0014 Sphingopyxis alaskensis RB2256 glutathione S-transferase-like protein YP_615073.1 10373 R 317655 CDS YP_615074.1 103485513 4083146 complement(11093..11815) 1 NC_008048.1 hypothetical protein 11815 4083146 Sala_0015 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615074.1 11093 R 317655 CDS YP_615075.1 103485514 4083147 complement(11849..12523) 1 NC_008048.1 glutathione S-transferase-like protein 12523 4083147 Sala_0016 Sphingopyxis alaskensis RB2256 glutathione S-transferase-like protein YP_615075.1 11849 R 317655 CDS YP_615076.1 103485515 4083148 complement(12546..13529) 1 NC_008048.1 alpha/beta hydrolase 13529 4083148 Sala_0017 Sphingopyxis alaskensis RB2256 alpha/beta hydrolase YP_615076.1 12546 R 317655 CDS YP_615077.1 103485516 4083149 complement(13559..13777) 1 NC_008048.1 hypothetical protein 13777 4083149 Sala_0018 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615077.1 13559 R 317655 CDS YP_615078.1 103485517 4083150 complement(13851..14285) 1 NC_008048.1 glyoxalase/bleomycin resistance protein/dioxygenase 14285 4083150 Sala_0019 Sphingopyxis alaskensis RB2256 glyoxalase/bleomycin resistance protein/dioxygenase YP_615078.1 13851 R 317655 CDS YP_615079.1 103485518 4083151 complement(14357..15097) 1 NC_008048.1 TetR family transcriptional regulator 15097 4083151 Sala_0020 Sphingopyxis alaskensis RB2256 TetR family transcriptional regulator YP_615079.1 14357 R 317655 CDS YP_615080.1 103485519 4083152 15206..16714 1 NC_008048.1 Mg chelatase-like protein 16714 4083152 Sala_0021 Sphingopyxis alaskensis RB2256 Mg chelatase-like protein YP_615080.1 15206 D 317655 CDS YP_615081.1 103485520 4083153 16724..17023 1 NC_008048.1 hypothetical protein 17023 4083153 Sala_0022 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615081.1 16724 D 317655 CDS YP_615082.1 103485521 4082210 17078..18832 1 NC_008048.1 diguanylate cyclase 18832 4082210 Sala_0023 Sphingopyxis alaskensis RB2256 diguanylate cyclase YP_615082.1 17078 D 317655 CDS YP_615083.1 103485522 4082211 complement(18852..19247) 1 NC_008048.1 hypothetical protein 19247 4082211 Sala_0024 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615083.1 18852 R 317655 CDS YP_615084.1 103485523 4082212 complement(19249..20457) 1 NC_008048.1 peptidase M23B 20457 4082212 Sala_0025 Sphingopyxis alaskensis RB2256 peptidase M23B YP_615084.1 19249 R 317655 CDS YP_615085.1 103485524 4082213 20688..22094 1 NC_008048.1 isoprenylcysteine carboxyl methyltransferase 22094 4082213 Sala_0026 Sphingopyxis alaskensis RB2256 isoprenylcysteine carboxyl methyltransferase YP_615085.1 20688 D 317655 CDS YP_615086.1 103485525 4082214 complement(22212..24476) 1 NC_008048.1 TonB-dependent receptor 24476 4082214 Sala_0027 Sphingopyxis alaskensis RB2256 TonB-dependent receptor YP_615086.1 22212 R 317655 CDS YP_615087.1 103485526 4082215 complement(24779..25867) 1 NC_008048.1 PepSY-associated TM helix family protein 25867 4082215 Sala_0028 Sphingopyxis alaskensis RB2256 PepSY-associated TM helix family protein YP_615087.1 24779 R 317655 CDS YP_615088.1 103485527 4082216 complement(25868..28018) 1 NC_008048.1 TonB-dependent receptor 28018 4082216 Sala_0029 Sphingopyxis alaskensis RB2256 TonB-dependent receptor YP_615088.1 25868 R 317655 CDS YP_615089.1 103485528 4082217 28222..30534 1 NC_008048.1 patatin 30534 4082217 Sala_0030 Sphingopyxis alaskensis RB2256 patatin YP_615089.1 28222 D 317655 CDS YP_615090.1 103485529 4082218 complement(30847..31545) 1 NC_008048.1 ThiJ/PfpI 31545 4082218 Sala_0031 Sphingopyxis alaskensis RB2256 ThiJ/PfpI YP_615090.1 30847 R 317655 CDS YP_615091.1 103485530 4082219 complement(31966..32262) 1 NC_008048.1 entericidin EcnAB 32262 4082219 Sala_0032 Sphingopyxis alaskensis RB2256 entericidin EcnAB YP_615091.1 31966 R 317655 CDS YP_615092.1 103485531 4082220 complement(32447..32764) 1 NC_008048.1 outer membrane protein 32764 4082220 Sala_0033 Sphingopyxis alaskensis RB2256 outer membrane protein YP_615092.1 32447 R 317655 CDS YP_615093.1 103485532 4082221 32993..33979 1 NC_008048.1 ArsR family transcriptional regulator 33979 4082221 Sala_0034 Sphingopyxis alaskensis RB2256 ArsR family transcriptional regulator YP_615093.1 32993 D 317655 CDS YP_615094.1 103485533 4082222 33976..34914 1 NC_008048.1 5,10-methylenetetrahydrofolate reductase 34914 4082222 Sala_0035 Sphingopyxis alaskensis RB2256 5,10-methylenetetrahydrofolate reductase YP_615094.1 33976 D 317655 CDS YP_615095.1 103485534 4082223 34911..35978 1 NC_008048.1 5-methyltetrahydrofolate--homocysteine methyltransferase 35978 4082223 Sala_0036 Sphingopyxis alaskensis RB2256 5-methyltetrahydrofolate--homocysteine methyltransferase YP_615095.1 34911 D 317655 CDS YP_615096.1 103485535 4082224 36101..38722 1 NC_008048.1 5-methyltetrahydrofolate--homocysteine methyltransferase 38722 4082224 Sala_0037 Sphingopyxis alaskensis RB2256 5-methyltetrahydrofolate--homocysteine methyltransferase YP_615096.1 36101 D 317655 CDS YP_615097.1 103485536 4082225 38833..39786 1 NC_008048.1 hypothetical protein 39786 4082225 Sala_0038 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615097.1 38833 D 317655 CDS YP_615098.1 103485537 4082226 complement(39789..40247) 1 NC_008048.1 hypothetical protein 40247 4082226 Sala_0039 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615098.1 39789 R 317655 CDS YP_615099.1 103485538 4082227 complement(40437..40757) 1 NC_008048.1 hypothetical protein 40757 4082227 Sala_0040 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615099.1 40437 R 317655 CDS YP_615100.1 103485539 4082228 complement(40793..41344) 1 NC_008048.1 TspO and MBR like proteins 41344 4082228 Sala_0041 Sphingopyxis alaskensis RB2256 TspO and MBR like proteins YP_615100.1 40793 R 317655 CDS YP_615101.1 103485540 4081535 complement(41406..42146) 1 NC_008048.1 hemolysin A 42146 4081535 Sala_0042 Sphingopyxis alaskensis RB2256 hemolysin A YP_615101.1 41406 R 317655 CDS YP_615102.1 103485541 4081536 complement(42262..44322) 1 NC_008048.1 thiol:disulfide interchange protein 44322 4081536 Sala_0043 Sphingopyxis alaskensis RB2256 thiol:disulfide interchange protein YP_615102.1 42262 R 317655 CDS YP_615103.1 103485542 4081537 44414..46099 1 NC_008048.1 type I phosphodiesterase/nucleotide pyrophosphatase 46099 4081537 Sala_0044 Sphingopyxis alaskensis RB2256 type I phosphodiesterase/nucleotide pyrophosphatase YP_615103.1 44414 D 317655 CDS YP_615104.1 103485543 4081538 46087..46947 1 NC_008048.1 pyrroline-5-carboxylate reductase 46947 4081538 Sala_0045 Sphingopyxis alaskensis RB2256 pyrroline-5-carboxylate reductase YP_615104.1 46087 D 317655 CDS YP_615105.1 103485544 4081539 complement(46964..47527) 1 NC_008048.1 MarR family transcriptional regulator 47527 4081539 Sala_0046 Sphingopyxis alaskensis RB2256 MarR family transcriptional regulator YP_615105.1 46964 R 317655 CDS YP_615106.1 103485545 4081540 47553..48638 1 NC_008048.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 48638 4081540 Sala_0047 Sphingopyxis alaskensis RB2256 branched-chain amino acid aminotransferase YP_615106.1 47553 D 317655 CDS YP_615107.1 103485546 4081542 48884..50962 1 NC_008048.1 phage integrase 50962 4081542 Sala_0048 Sphingopyxis alaskensis RB2256 phage integrase YP_615107.1 48884 D 317655 CDS YP_615108.1 103485547 4081543 complement(51177..54644) 1 NC_008048.1 hypothetical protein 54644 4081543 Sala_0049 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615108.1 51177 R 317655 CDS YP_615109.1 103485548 4081544 complement(54644..55894) 1 NC_008048.1 metallophosphoesterase 55894 4081544 Sala_0050 Sphingopyxis alaskensis RB2256 metallophosphoesterase YP_615109.1 54644 R 317655 CDS YP_615110.1 103485549 4081545 complement(55994..57361) 1 NC_008048.1 UBA/ThiF-type NAD/FAD binding fold containing protein 57361 4081545 Sala_0051 Sphingopyxis alaskensis RB2256 UBA/ThiF-type NAD/FAD binding fold containing protein YP_615110.1 55994 R 317655 CDS YP_615111.1 103485550 4081546 complement(57375..57854) 1 NC_008048.1 hypothetical protein 57854 4081546 Sala_0052 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615111.1 57375 R 317655 CDS YP_615112.1 103485551 4081547 complement(57838..58296) 1 NC_008048.1 hypothetical protein 58296 4081547 Sala_0053 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615112.1 57838 R 317655 CDS YP_615113.1 103485552 4081548 complement(58298..58759) 1 NC_008048.1 hypothetical protein 58759 4081548 Sala_0054 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615113.1 58298 R 317655 CDS YP_615114.1 103485553 4081549 complement(58843..62181) 1 NC_008048.1 UvrD/REP helicase 62181 4081549 Sala_0055 Sphingopyxis alaskensis RB2256 UvrD/REP helicase YP_615114.1 58843 R 317655 CDS YP_615115.1 103485554 4081550 complement(62186..62770) 1 NC_008048.1 hypothetical protein 62770 4081550 Sala_0056 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615115.1 62186 R 317655 CDS YP_615116.1 103485555 4081551 complement(62767..63480) 1 NC_008048.1 ECF subfamily RNA polymerase sigma-24 factor 63480 4081551 Sala_0057 Sphingopyxis alaskensis RB2256 ECF subfamily RNA polymerase sigma-24 factor YP_615116.1 62767 R 317655 CDS YP_615117.1 103485556 4081552 63977..64852 1 NC_008048.1 hypothetical protein 64852 4081552 Sala_0058 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615117.1 63977 D 317655 CDS YP_615118.1 103485557 4081553 65272..67644 1 NC_008048.1 hypothetical protein 67644 4081553 Sala_0059 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615118.1 65272 D 317655 CDS YP_615119.1 103485558 4082133 68024..69100 1 NC_008048.1 amidohydrolase 2 69100 4082133 Sala_0060 Sphingopyxis alaskensis RB2256 amidohydrolase 2 YP_615119.1 68024 D 317655 CDS YP_615120.1 103485559 4082134 69196..69759 1 NC_008048.1 hypothetical protein 69759 4082134 Sala_0061 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615120.1 69196 D 317655 CDS YP_615121.1 103485560 4082135 69756..70496 1 NC_008048.1 hypothetical protein 70496 4082135 Sala_0062 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615121.1 69756 D 317655 CDS YP_615122.1 103485561 4082136 70663..71181 1 NC_008048.1 hypothetical protein 71181 4082136 Sala_0063 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615122.1 70663 D 317655 CDS YP_615123.1 103485562 4082137 71489..72214 1 NC_008048.1 hypothetical protein 72214 4082137 Sala_0064 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615123.1 71489 D 317655 CDS YP_615124.1 103485563 4082138 72355..72810 1 NC_008048.1 17 kDa surface antigen 72810 4082138 Sala_0065 Sphingopyxis alaskensis RB2256 17 kDa surface antigen YP_615124.1 72355 D 317655 CDS YP_615125.1 103485564 4082139 complement(72897..73181) 1 NC_008048.1 hypothetical protein 73181 4082139 Sala_0066 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615125.1 72897 R 317655 CDS YP_615126.1 103485565 4082140 complement(73686..74876) 1 NC_008048.1 putative transposase 74876 4082140 Sala_0067 Sphingopyxis alaskensis RB2256 putative transposase YP_615126.1 73686 R 317655 CDS YP_615127.1 103485566 4082141 complement(74882..75790) 1 NC_008048.1 phage integrase 75790 4082141 Sala_0068 Sphingopyxis alaskensis RB2256 phage integrase YP_615127.1 74882 R 317655 CDS YP_615128.1 103485567 4082142 complement(75977..76849) 1 NC_008048.1 hypothetical protein 76849 4082142 Sala_0069 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615128.1 75977 R 317655 CDS YP_615129.1 103485568 4082143 complement(76846..77403) 1 NC_008048.1 hypothetical protein 77403 4082143 Sala_0070 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615129.1 76846 R 317655 CDS YP_615130.1 103485569 4082144 77512..78048 1 NC_008048.1 hypothetical protein 78048 4082144 Sala_0071 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615130.1 77512 D 317655 CDS YP_615131.1 103485570 4082145 complement(78229..79272) 1 NC_008048.1 beta-lactamase-like protein 79272 4082145 Sala_0072 Sphingopyxis alaskensis RB2256 beta-lactamase-like protein YP_615131.1 78229 R 317655 CDS YP_615132.1 103485571 4082146 complement(79659..79934) 1 NC_008048.1 hypothetical protein 79934 4082146 Sala_0073 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615132.1 79659 R 317655 CDS YP_615133.1 103485572 4082147 complement(80291..81436) 1 NC_008048.1 thioredoxin-like protein 81436 4082147 Sala_0074 Sphingopyxis alaskensis RB2256 thioredoxin-like protein YP_615133.1 80291 R 317655 CDS YP_615134.1 103485573 4082148 complement(81527..82579) 1 NC_008048.1 twin-arginine translocation pathway signal 82579 4082148 Sala_0075 Sphingopyxis alaskensis RB2256 twin-arginine translocation pathway signal YP_615134.1 81527 R 317655 CDS YP_615135.1 103485574 4082149 complement(82625..83080) 1 NC_008048.1 hypothetical protein 83080 4082149 Sala_0076 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615135.1 82625 R 317655 CDS YP_615136.1 103485575 4082150 complement(83189..83740) 1 NC_008048.1 TetR family transcriptional regulator 83740 4082150 Sala_0077 Sphingopyxis alaskensis RB2256 TetR family transcriptional regulator YP_615136.1 83189 R 317655 CDS YP_615137.1 103485576 4082151 83846..84697 1 NC_008048.1 short-chain dehydrogenase/reductase SDR 84697 4082151 Sala_0078 Sphingopyxis alaskensis RB2256 short-chain dehydrogenase/reductase SDR YP_615137.1 83846 D 317655 CDS YP_615138.1 103485577 4082054 complement(84803..85024) 1 NC_008048.1 hypothetical protein 85024 4082054 Sala_0079 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615138.1 84803 R 317655 CDS YP_615139.1 103485578 4082055 complement(85075..85491) 1 NC_008048.1 OsmC-like protein 85491 4082055 Sala_0080 Sphingopyxis alaskensis RB2256 OsmC-like protein YP_615139.1 85075 R 317655 CDS YP_615140.1 103485579 4082056 complement(85527..86873) 1 NC_008048.1 epoxide hydrolase-like protein 86873 4082056 Sala_0081 Sphingopyxis alaskensis RB2256 epoxide hydrolase-like protein YP_615140.1 85527 R 317655 CDS YP_615141.1 103485580 4082057 complement(86908..87717) 1 NC_008048.1 short-chain dehydrogenase/reductase SDR 87717 4082057 Sala_0082 Sphingopyxis alaskensis RB2256 short-chain dehydrogenase/reductase SDR YP_615141.1 86908 R 317655 CDS YP_615142.1 103485581 4082058 complement(87851..88753) 1 NC_008048.1 LysR family transcriptional regulator 88753 4082058 Sala_0083 Sphingopyxis alaskensis RB2256 LysR family transcriptional regulator YP_615142.1 87851 R 317655 CDS YP_615143.1 103485582 4082059 complement(89025..89618) 1 NC_008048.1 TetR family transcriptional regulator 89618 4082059 Sala_0084 Sphingopyxis alaskensis RB2256 TetR family transcriptional regulator YP_615143.1 89025 R 317655 CDS YP_615144.1 103485583 4082060 89692..90405 1 NC_008048.1 oxidoreductase 90405 4082060 Sala_0085 Sphingopyxis alaskensis RB2256 oxidoreductase YP_615144.1 89692 D 317655 CDS YP_615145.1 103485584 4082061 complement(90499..90834) 1 NC_008048.1 hypothetical protein 90834 4082061 Sala_0086 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615145.1 90499 R 317655 CDS YP_615146.1 103485585 4082062 complement(90958..91749) 1 NC_008048.1 hypothetical protein 91749 4082062 Sala_0087 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615146.1 90958 R 317655 CDS YP_615147.1 103485586 4082063 complement(91752..92687) 1 NC_008048.1 hypothetical protein 92687 4082063 Sala_0088 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615147.1 91752 R 317655 CDS YP_615148.1 103485587 4082064 93158..93844 1 NC_008048.1 ribose 5-phosphate isomerase 93844 4082064 Sala_0089 Sphingopyxis alaskensis RB2256 ribose 5-phosphate isomerase YP_615148.1 93158 D 317655 CDS YP_615149.1 103485588 4082065 94088..94663 1 NC_008048.1 MarR family transcriptional regulator 94663 4082065 Sala_0090 Sphingopyxis alaskensis RB2256 MarR family transcriptional regulator YP_615149.1 94088 D 317655 CDS YP_615150.1 103485589 4082066 complement(94707..95270) 1 NC_008048.1 TetR family transcriptional regulator 95270 4082066 Sala_0091 Sphingopyxis alaskensis RB2256 TetR family transcriptional regulator YP_615150.1 94707 R 317655 CDS YP_615151.1 103485590 4082067 95423..95848 1 NC_008048.1 hypothetical protein 95848 4082067 Sala_0092 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615151.1 95423 D 317655 CDS YP_615152.1 103485591 4082068 95841..96686 1 NC_008048.1 NmrA-like protein 96686 4082068 Sala_0093 Sphingopyxis alaskensis RB2256 NmrA-like protein YP_615152.1 95841 D 317655 CDS YP_615153.1 103485592 4082069 96726..97007 1 NC_008048.1 hypothetical protein 97007 4082069 Sala_0094 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615153.1 96726 D 317655 CDS YP_615154.1 103485593 4082070 97276..98235 1 NC_008048.1 LysR family transcriptional regulator 98235 4082070 Sala_0095 Sphingopyxis alaskensis RB2256 LysR family transcriptional regulator YP_615154.1 97276 D 317655 CDS YP_615155.1 103485594 4082072 99504..100208 1 NC_008048.1 glutathione S-transferase-like protein 100208 4082072 Sala_0097 Sphingopyxis alaskensis RB2256 glutathione S-transferase-like protein YP_615155.1 99504 D 317655 CDS YP_615156.1 103485595 4082073 100205..101173 1 NC_008048.1 Mg2+ transporter protein, CorA-like protein 101173 4082073 Sala_0098 Sphingopyxis alaskensis RB2256 Mg2+ transporter protein, CorA-like protein YP_615156.1 100205 D 317655 CDS YP_615157.1 103485596 4082094 101270..101842 1 NC_008048.1 hypothetical protein 101842 4082094 Sala_0099 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615157.1 101270 D 317655 CDS YP_615158.1 103485597 4082095 101928..102380 1 NC_008048.1 hypothetical protein 102380 4082095 Sala_0100 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615158.1 101928 D 317655 CDS YP_615159.1 103485598 4082096 complement(102403..103683) 1 NC_008048.1 major facilitator superfamily transporter 103683 4082096 Sala_0101 Sphingopyxis alaskensis RB2256 major facilitator superfamily transporter YP_615159.1 102403 R 317655 CDS YP_615160.1 103485599 4082097 complement(103680..103928) 1 NC_008048.1 hypothetical protein 103928 4082097 Sala_0102 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615160.1 103680 R 317655 CDS YP_615161.1 103485600 4082098 complement(103932..104402) 1 NC_008048.1 hypothetical protein 104402 4082098 Sala_0103 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615161.1 103932 R 317655 CDS YP_615162.1 103485601 4082099 complement(104452..104742) 1 NC_008048.1 hypothetical protein 104742 4082099 Sala_0104 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615162.1 104452 R 317655 CDS YP_615163.1 103485602 4082100 complement(104813..105145) 1 NC_008048.1 hypothetical protein 105145 4082100 Sala_0105 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615163.1 104813 R 317655 CDS YP_615164.1 103485603 4082101 complement(105166..105597) 1 NC_008048.1 hypothetical protein 105597 4082101 Sala_0106 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615164.1 105166 R 317655 CDS YP_615165.1 103485604 4082102 complement(105651..106676) 1 NC_008048.1 zinc-binding alcohol dehydrogenase 106676 4082102 Sala_0107 Sphingopyxis alaskensis RB2256 zinc-binding alcohol dehydrogenase YP_615165.1 105651 R 317655 CDS YP_615166.1 103485605 4082103 107168..107773 1 NC_008048.1 oxidoreductase, molybdopterin binding 107773 4082103 Sala_0108 Sphingopyxis alaskensis RB2256 oxidoreductase, molybdopterin binding YP_615166.1 107168 D 317655 CDS YP_615167.1 103485606 4082104 107862..108512 1 NC_008048.1 oxidoreductase FAD-binding region 108512 4082104 Sala_0109 Sphingopyxis alaskensis RB2256 oxidoreductase FAD-binding region YP_615167.1 107862 D 317655 CDS YP_615168.1 103485607 4082105 108571..109836 1 NC_008048.1 Acetyl-CoA C-acyltransferase 109836 4082105 Sala_0110 Sphingopyxis alaskensis RB2256 Acetyl-CoA C-acyltransferase YP_615168.1 108571 D 317655 CDS YP_615169.1 103485608 4082106 109889..110170 1 NC_008048.1 hypothetical protein 110170 4082106 Sala_0111 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615169.1 109889 D 317655 CDS YP_615170.1 103485609 4082107 110198..111940 1 NC_008048.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 111940 argS 4082107 argS Sphingopyxis alaskensis RB2256 arginyl-tRNA synthetase YP_615170.1 110198 D 317655 CDS YP_615171.1 103485610 4082108 112032..112295 1 NC_008048.1 hypothetical protein 112295 4082108 Sala_0113 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615171.1 112032 D 317655 CDS YP_615172.1 103485611 4082109 112555..113532 1 NC_008048.1 similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate; 6-phosphogluconate dehydrogenase 113532 4082109 Sala_0114 Sphingopyxis alaskensis RB2256 6-phosphogluconate dehydrogenase YP_615172.1 112555 D 317655 CDS YP_615173.1 103485612 4082110 113771..114109 1 NC_008048.1 hypothetical protein 114109 4082110 Sala_0115 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615173.1 113771 D 317655 CDS YP_615174.1 103485613 4082111 114425..115027 1 NC_008048.1 methionine sulfoxide reductase A 115027 4082111 Sala_0117 Sphingopyxis alaskensis RB2256 methionine sulfoxide reductase A YP_615174.1 114425 D 317655 CDS YP_615175.1 103485614 4082112 115024..116043 1 NC_008048.1 beta-lactamase-like protein 116043 4082112 Sala_0118 Sphingopyxis alaskensis RB2256 beta-lactamase-like protein YP_615175.1 115024 D 317655 CDS YP_615176.1 103485615 4082267 116111..116647 1 NC_008048.1 MarR family transcriptional regulator 116647 4082267 Sala_0119 Sphingopyxis alaskensis RB2256 MarR family transcriptional regulator YP_615176.1 116111 D 317655 CDS YP_615177.1 103485616 4082268 116689..117183 1 NC_008048.1 hypothetical protein 117183 4082268 Sala_0120 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615177.1 116689 D 317655 CDS YP_615178.1 103485617 4082269 complement(117462..118886) 1 NC_008048.1 Catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 118886 4082269 Sala_0121 Sphingopyxis alaskensis RB2256 dihydrolipoamide dehydrogenase YP_615178.1 117462 R 317655 CDS YP_615179.1 103485618 4082270 complement(118968..119867) 1 NC_008048.1 hypothetical protein 119867 4082270 Sala_0122 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615179.1 118968 R 317655 CDS YP_615180.1 103485619 4082271 complement(119945..120850) 1 NC_008048.1 LysR family transcriptional regulator 120850 4082271 Sala_0123 Sphingopyxis alaskensis RB2256 LysR family transcriptional regulator YP_615180.1 119945 R 317655 CDS YP_615181.1 103485620 4082272 121243..121896 1 NC_008048.1 helix-turn-helix, Fis-type 121896 4082272 Sala_0124 Sphingopyxis alaskensis RB2256 helix-turn-helix, Fis-type YP_615181.1 121243 D 317655 CDS YP_615182.1 103485621 4082273 121993..122436 1 NC_008048.1 this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; methionine sulfoxide reductase B 122436 4082273 Sala_0125 Sphingopyxis alaskensis RB2256 methionine sulfoxide reductase B YP_615182.1 121993 D 317655 CDS YP_615183.1 103485622 4082274 122439..122954 1 NC_008048.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A 122954 4082274 Sala_0126 Sphingopyxis alaskensis RB2256 methionine sulfoxide reductase A YP_615183.1 122439 D 317655 CDS YP_615184.1 103485623 4082275 122968..123243 1 NC_008048.1 glutaredoxin GrxC 123243 4082275 Sala_0127 Sphingopyxis alaskensis RB2256 glutaredoxin GrxC YP_615184.1 122968 D 317655 CDS YP_615185.1 103485624 4082276 complement(123317..124228) 1 NC_008048.1 cation diffusion facilitator family transporter 124228 4082276 Sala_0128 Sphingopyxis alaskensis RB2256 cation diffusion facilitator family transporter YP_615185.1 123317 R 317655 CDS YP_615186.1 103485625 4082277 complement(124375..125004) 1 NC_008048.1 hypothetical protein 125004 4082277 Sala_0129 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615186.1 124375 R 317655 CDS YP_615187.1 103485626 4082278 complement(125193..125585) 1 NC_008048.1 endoribonuclease L-PSP 125585 4082278 Sala_0130 Sphingopyxis alaskensis RB2256 endoribonuclease L-PSP YP_615187.1 125193 R 317655 CDS YP_615188.1 103485627 4082279 complement(125745..126734) 1 NC_008048.1 cytochrome c, class I 126734 4082279 Sala_0131 Sphingopyxis alaskensis RB2256 cytochrome c, class I YP_615188.1 125745 R 317655 CDS YP_615189.1 103485628 4082280 complement(126795..127478) 1 NC_008048.1 hypothetical protein 127478 4082280 Sala_0132 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615189.1 126795 R 317655 CDS YP_615190.1 103485629 4082281 128017..128427 1 NC_008048.1 hypothetical protein 128427 4082281 Sala_0133 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615190.1 128017 D 317655 CDS YP_615191.1 103485630 4082282 complement(128453..129115) 1 NC_008048.1 hypothetical protein 129115 4082282 Sala_0134 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615191.1 128453 R 317655 CDS YP_615192.1 103485631 4082283 129305..129706 1 NC_008048.1 hypothetical protein 129706 4082283 Sala_0135 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615192.1 129305 D 317655 CDS YP_615193.1 103485632 4082284 130031..130900 1 NC_008048.1 hypothetical protein 130900 4082284 Sala_0136 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615193.1 130031 D 317655 CDS YP_615194.1 103485633 4082285 130887..131660 1 NC_008048.1 hypothetical protein 131660 4082285 Sala_0137 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615194.1 130887 D 317655 CDS YP_615195.1 103485634 4082286 complement(131815..132669) 1 NC_008048.1 hypothetical protein 132669 4082286 Sala_0138 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615195.1 131815 R 317655 CDS YP_615196.1 103485635 4081809 132709..132969 1 NC_008048.1 hypothetical protein 132969 4081809 Sala_0139 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615196.1 132709 D 317655 CDS YP_615197.1 103485636 4081810 133348..136752 1 NC_008048.1 hypothetical protein 136752 4081810 Sala_0140 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615197.1 133348 D 317655 CDS YP_615198.1 103485637 4081811 136971..137735 1 NC_008048.1 hypothetical protein 137735 4081811 Sala_0141 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615198.1 136971 D 317655 CDS YP_615199.1 103485638 4081812 138017..138661 1 NC_008048.1 hypothetical protein 138661 4081812 Sala_0142 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615199.1 138017 D 317655 CDS YP_615200.1 103485639 4081813 138781..139119 1 NC_008048.1 hypothetical protein 139119 4081813 Sala_0143 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615200.1 138781 D 317655 CDS YP_615201.1 103485640 4081814 complement(139264..140049) 1 NC_008048.1 hypothetical protein 140049 4081814 Sala_0144 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615201.1 139264 R 317655 CDS YP_615202.1 103485641 4081815 complement(140728..141693) 1 NC_008048.1 thioredoxin reductase 141693 4081815 Sala_0145 Sphingopyxis alaskensis RB2256 thioredoxin reductase YP_615202.1 140728 R 317655 CDS YP_615203.1 103485642 4081816 141909..142535 1 NC_008048.1 type 11 methyltransferase 142535 4081816 Sala_0146 Sphingopyxis alaskensis RB2256 type 11 methyltransferase YP_615203.1 141909 D 317655 CDS YP_615204.1 103485643 4081817 complement(142661..143389) 1 NC_008048.1 rhodanese-like protein 143389 4081817 Sala_0147 Sphingopyxis alaskensis RB2256 rhodanese-like protein YP_615204.1 142661 R 317655 CDS YP_615205.1 103485644 4081818 143693..144031 1 NC_008048.1 nitrogen regulatory protein P-II 144031 4081818 Sala_0148 Sphingopyxis alaskensis RB2256 nitrogen regulatory protein P-II YP_615205.1 143693 D 317655 CDS YP_615206.1 103485645 4081819 144103..145515 1 NC_008048.1 glutamine synthetase, type I 145515 4081819 Sala_0149 Sphingopyxis alaskensis RB2256 glutamine synthetase, type I YP_615206.1 144103 D 317655 CDS YP_615207.1 103485646 4081820 145673..146149 1 NC_008048.1 hypothetical protein 146149 4081820 Sala_0150 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615207.1 145673 D 317655 CDS YP_615208.1 103485647 4081821 complement(146162..146833) 1 NC_008048.1 hypothetical protein 146833 4081821 Sala_0151 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615208.1 146162 R 317655 CDS YP_615209.1 103485648 4081822 complement(146835..147116) 1 NC_008048.1 XRE family transcriptional regulator 147116 4081822 Sala_0152 Sphingopyxis alaskensis RB2256 XRE family transcriptional regulator YP_615209.1 146835 R 317655 CDS YP_615210.1 103485649 4081823 147432..148898 1 NC_008048.1 glucose/sorbosone dehydrogenase-like protein 148898 4081823 Sala_0153 Sphingopyxis alaskensis RB2256 glucose/sorbosone dehydrogenase-like protein YP_615210.1 147432 D 317655 CDS YP_615211.1 103485650 4081824 149067..150500 1 NC_008048.1 aldehyde dehydrogenase 150500 4081824 Sala_0154 Sphingopyxis alaskensis RB2256 aldehyde dehydrogenase YP_615211.1 149067 D 317655 CDS YP_615212.1 103485651 4081825 150674..151900 1 NC_008048.1 bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase 151900 argJ 4081825 argJ Sphingopyxis alaskensis RB2256 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase YP_615212.1 150674 D 317655 CDS YP_615213.1 103485652 4081826 complement(152009..152329) 1 NC_008048.1 thioredoxin 152329 4081826 Sala_0156 Sphingopyxis alaskensis RB2256 thioredoxin YP_615213.1 152009 R 317655 CDS YP_615214.1 103485653 4081827 complement(152363..155863) 1 NC_008048.1 UvrD/REP helicase 155863 4081827 Sala_0157 Sphingopyxis alaskensis RB2256 UvrD/REP helicase YP_615214.1 152363 R 317655 CDS YP_615215.1 103485654 4082916 complement(155860..158835) 1 NC_008048.1 helicase 158835 4082916 Sala_0158 Sphingopyxis alaskensis RB2256 helicase YP_615215.1 155860 R 317655 CDS YP_615216.1 103485655 4082917 complement(158935..159654) 1 NC_008048.1 nucleotidyl transferase 159654 4082917 Sala_0159 Sphingopyxis alaskensis RB2256 nucleotidyl transferase YP_615216.1 158935 R 317655 CDS YP_615217.1 103485656 4082918 complement(159651..160622) 1 NC_008048.1 aminoglycoside phosphotransferase 160622 4082918 Sala_0160 Sphingopyxis alaskensis RB2256 aminoglycoside phosphotransferase YP_615217.1 159651 R 317655 CDS YP_615218.1 103485657 4082919 complement(160619..161113) 1 NC_008048.1 hypothetical protein 161113 4082919 Sala_0161 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615218.1 160619 R 317655 CDS YP_615219.1 103485658 4082920 complement(161199..163562) 1 NC_008048.1 PAS/PAC sensor signal transduction histidine kinase 163562 4082920 Sala_0162 Sphingopyxis alaskensis RB2256 PAS/PAC sensor signal transduction histidine kinase YP_615219.1 161199 R 317655 CDS YP_615220.1 103485659 4082921 complement(163757..165175) 1 NC_008048.1 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase 165175 4082921 Sala_0163 Sphingopyxis alaskensis RB2256 S-adenosyl-L-homocysteine hydrolase YP_615220.1 163757 R 317655 CDS YP_615221.1 103485660 4082922 165576..165974 1 NC_008048.1 hypothetical protein 165974 4082922 Sala_0164 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615221.1 165576 D 317655 CDS YP_615222.1 103485661 4082923 complement(166068..166712) 1 NC_008048.1 hypothetical protein 166712 4082923 Sala_0165 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615222.1 166068 R 317655 CDS YP_615223.1 103485662 4082924 166953..167456 1 NC_008048.1 alkyl hydroperoxide reductase 167456 4082924 Sala_0166 Sphingopyxis alaskensis RB2256 alkyl hydroperoxide reductase YP_615223.1 166953 D 317655 CDS YP_615224.1 103485663 4082925 167576..169057 1 NC_008048.1 Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile; AMP nucleosidase 169057 4082925 Sala_0167 Sphingopyxis alaskensis RB2256 AMP nucleosidase YP_615224.1 167576 D 317655 CDS YP_615225.1 103485664 4082926 169208..171547 1 NC_008048.1 ATPase 171547 4082926 Sala_0168 Sphingopyxis alaskensis RB2256 ATPase YP_615225.1 169208 D 317655 CDS YP_615226.1 103485665 4082927 complement(171643..173307) 1 NC_008048.1 AMP-dependent synthetase and ligase 173307 4082927 Sala_0169 Sphingopyxis alaskensis RB2256 AMP-dependent synthetase and ligase YP_615226.1 171643 R 317655 CDS YP_615227.1 103485666 4082928 173440..173970 1 NC_008048.1 hypothetical protein 173970 4082928 Sala_0170 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615227.1 173440 D 317655 CDS YP_615228.1 103485667 4082929 174007..175845 1 NC_008048.1 para-aminobenzoate synthase, component I 175845 4082929 Sala_0171 Sphingopyxis alaskensis RB2256 para-aminobenzoate synthase, component I YP_615228.1 174007 D 317655 CDS YP_615229.1 103485668 4082930 175960..177171 1 NC_008048.1 class I and II aminotransferase 177171 4082930 Sala_0172 Sphingopyxis alaskensis RB2256 class I and II aminotransferase YP_615229.1 175960 D 317655 CDS YP_615230.1 103485669 4082931 177591..178280 1 NC_008048.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A 178280 4082931 Sala_0173 Sphingopyxis alaskensis RB2256 methionine sulfoxide reductase A YP_615230.1 177591 D 317655 CDS YP_615231.1 103485670 4082932 178424..179590 1 NC_008048.1 beta-lactamase 179590 4082932 Sala_0174 Sphingopyxis alaskensis RB2256 beta-lactamase YP_615231.1 178424 D 317655 CDS YP_615232.1 103485671 4082933 179598..179909 1 NC_008048.1 hypothetical protein 179909 4082933 Sala_0175 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615232.1 179598 D 317655 CDS YP_615233.1 103485672 4082934 179980..181260 1 NC_008048.1 catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 181260 sucC 4082934 sucC Sphingopyxis alaskensis RB2256 succinyl-CoA synthetase subunit beta YP_615233.1 179980 D 317655 CDS YP_615234.1 103485673 4082935 181362..181634 1 NC_008048.1 hypothetical protein 181634 4082935 Sala_0177 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615234.1 181362 D 317655 CDS YP_615235.1 103485674 4082287 181761..182510 1 NC_008048.1 electron transfer flavoprotein subunit beta 182510 4082287 Sala_0178 Sphingopyxis alaskensis RB2256 electron transfer flavoprotein subunit beta YP_615235.1 181761 D 317655 CDS YP_615236.1 103485675 4082288 182622..183551 1 NC_008048.1 electron transfer flavoprotein subunit alpha 183551 4082288 Sala_0179 Sphingopyxis alaskensis RB2256 electron transfer flavoprotein subunit alpha YP_615236.1 182622 D 317655 CDS YP_615237.1 103485676 4082289 183563..184933 1 NC_008048.1 hypothetical protein 184933 4082289 Sala_0180 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615237.1 183563 D 317655 CDS YP_615238.1 103485677 4082290 185217..187952 1 NC_008048.1 TonB-dependent receptor 187952 4082290 Sala_0181 Sphingopyxis alaskensis RB2256 TonB-dependent receptor YP_615238.1 185217 D 317655 CDS YP_615239.1 103485678 4082291 188026..189534 1 NC_008048.1 tryptophan halogenase 189534 4082291 Sala_0182 Sphingopyxis alaskensis RB2256 tryptophan halogenase YP_615239.1 188026 D 317655 CDS YP_615240.1 103485679 4082292 189531..191333 1 NC_008048.1 alpha amylase 191333 4082292 Sala_0183 Sphingopyxis alaskensis RB2256 alpha amylase YP_615240.1 189531 D 317655 CDS YP_615241.1 103485680 4082293 191345..192988 1 NC_008048.1 alpha amylase 192988 4082293 Sala_0184 Sphingopyxis alaskensis RB2256 alpha amylase YP_615241.1 191345 D 317655 CDS YP_615242.1 103485681 4082294 192991..195033 1 NC_008048.1 alpha-glucosidase 195033 4082294 Sala_0185 Sphingopyxis alaskensis RB2256 alpha-glucosidase YP_615242.1 192991 D 317655 CDS YP_615243.1 103485682 4082295 195234..197504 1 NC_008048.1 oxidoreductase alpha (molybdopterin) subunit 197504 4082295 Sala_0186 Sphingopyxis alaskensis RB2256 oxidoreductase alpha (molybdopterin) subunit YP_615243.1 195234 D 317655 CDS YP_615244.1 103485683 4082296 complement(197506..198018) 1 NC_008048.1 molybdopterin-guanine dinucleotide biosynthesis protein MobA 198018 4082296 Sala_0187 Sphingopyxis alaskensis RB2256 molybdopterin-guanine dinucleotide biosynthesis protein MobA YP_615244.1 197506 R 317655 CDS YP_615245.1 103485684 4082297 complement(198015..198818) 1 NC_008048.1 formate dehydrogenase family accessory protein FdhD 198818 4082297 Sala_0188 Sphingopyxis alaskensis RB2256 formate dehydrogenase family accessory protein FdhD YP_615245.1 198015 R 317655 CDS YP_615246.1 103485685 4082298 complement(198870..200369) 1 NC_008048.1 in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; glycerol-3-phosphate dehydrogenase 200369 glpD 4082298 glpD Sphingopyxis alaskensis RB2256 glycerol-3-phosphate dehydrogenase YP_615246.1 198870 R 317655 CDS YP_615247.1 103485686 4082299 200525..202063 1 NC_008048.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 202063 4082299 Sala_0190 Sphingopyxis alaskensis RB2256 glucose-6-phosphate 1-dehydrogenase YP_615247.1 200525 D 317655 CDS YP_615248.1 103485687 4082300 202109..204100 1 NC_008048.1 catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate; phosphogluconate dehydratase 204100 4082300 Sala_0191 Sphingopyxis alaskensis RB2256 phosphogluconate dehydratase YP_615248.1 202109 D 317655 CDS YP_615249.1 103485688 4082301 204199..204819 1 NC_008048.1 2-dehydro-3-deoxyphosphogluconate aldolase 204819 4082301 Sala_0192 Sphingopyxis alaskensis RB2256 2-dehydro-3-deoxyphosphogluconate aldolase YP_615249.1 204199 D 317655 CDS YP_615250.1 103485689 4082302 204922..206478 1 NC_008048.1 HAD family hydrolase 206478 4082302 Sala_0193 Sphingopyxis alaskensis RB2256 HAD family hydrolase YP_615250.1 204922 D 317655 CDS YP_615251.1 103485690 4082303 206601..208952 1 NC_008048.1 PlsB; catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA; glycerol-3-phosphate acyltransferase 208952 4082303 Sala_0194 Sphingopyxis alaskensis RB2256 glycerol-3-phosphate acyltransferase YP_615251.1 206601 D 317655 CDS YP_615252.1 103485691 4082304 209034..210590 1 NC_008048.1 hypothetical protein 210590 4082304 Sala_0195 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615252.1 209034 D 317655 CDS YP_615253.1 103485692 4082305 210709..212157 1 NC_008048.1 patatin 212157 4082305 Sala_0196 Sphingopyxis alaskensis RB2256 patatin YP_615253.1 210709 D 317655 CDS YP_615254.1 103485693 4082113 212154..213020 1 NC_008048.1 acylglycerol lipase 213020 4082113 Sala_0197 Sphingopyxis alaskensis RB2256 acylglycerol lipase YP_615254.1 212154 D 317655 CDS YP_615255.1 103485694 4082114 213017..213952 1 NC_008048.1 alpha/beta hydrolase 213952 4082114 Sala_0198 Sphingopyxis alaskensis RB2256 alpha/beta hydrolase YP_615255.1 213017 D 317655 CDS YP_615256.1 103485695 4082115 214037..215038 1 NC_008048.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 215038 gpsA 4082115 gpsA Sphingopyxis alaskensis RB2256 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_615256.1 214037 D 317655 CDS YP_615257.1 103485696 4082116 complement(215170..215739) 1 NC_008048.1 thioredoxin domain-containing protein 215739 4082116 Sala_0200 Sphingopyxis alaskensis RB2256 thioredoxin domain-containing protein YP_615257.1 215170 R 317655 CDS YP_615258.1 103485697 4082117 215765..217171 1 NC_008048.1 argininosuccinate lyase 217171 4082117 Sala_0201 Sphingopyxis alaskensis RB2256 argininosuccinate lyase YP_615258.1 215765 D 317655 CDS YP_615259.1 103485698 4082118 217171..217422 1 NC_008048.1 hypothetical protein 217422 4082118 Sala_0202 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615259.1 217171 D 317655 CDS YP_615260.1 103485699 4082119 217574..218833 1 NC_008048.1 diaminopimelate decarboxylase 218833 4082119 Sala_0203 Sphingopyxis alaskensis RB2256 diaminopimelate decarboxylase YP_615260.1 217574 D 317655 CDS YP_615261.1 103485700 4082120 218984..219766 1 NC_008048.1 siroheme synthase 219766 4082120 Sala_0204 Sphingopyxis alaskensis RB2256 siroheme synthase YP_615261.1 218984 D 317655 CDS YP_615262.1 103485701 4082121 complement(219907..220932) 1 NC_008048.1 sigma-54 dependent trancsriptional regulator 220932 4082121 Sala_0205 Sphingopyxis alaskensis RB2256 sigma-54 dependent trancsriptional regulator YP_615262.1 219907 R 317655 CDS YP_615263.1 103485702 4082122 221032..221277 1 NC_008048.1 hypothetical protein 221277 4082122 Sala_0206 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615263.1 221032 D 317655 CDS YP_615264.1 103485703 4082123 221379..222041 1 NC_008048.1 phage shock protein A, PspA 222041 4082123 Sala_0207 Sphingopyxis alaskensis RB2256 phage shock protein A, PspA YP_615264.1 221379 D 317655 CDS YP_615265.1 103485704 4082124 222054..222329 1 NC_008048.1 phage shock B 222329 4082124 Sala_0208 Sphingopyxis alaskensis RB2256 phage shock B YP_615265.1 222054 D 317655 CDS YP_615266.1 103485705 4082125 222331..222711 1 NC_008048.1 phage shock protein C, PspC 222711 4082125 Sala_0209 Sphingopyxis alaskensis RB2256 phage shock protein C, PspC YP_615266.1 222331 D 317655 CDS YP_615267.1 103485706 4082126 222744..223043 1 NC_008048.1 hypothetical protein 223043 4082126 Sala_0210 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615267.1 222744 D 317655 CDS YP_615268.1 103485707 4082127 223052..223372 1 NC_008048.1 hypothetical protein 223372 4082127 Sala_0211 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615268.1 223052 D 317655 CDS YP_615269.1 103485708 4082128 223385..223648 1 NC_008048.1 hypothetical protein 223648 4082128 Sala_0212 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615269.1 223385 D 317655 CDS YP_615270.1 103485709 4082129 223681..223941 1 NC_008048.1 hypothetical protein 223941 4082129 Sala_0213 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615270.1 223681 D 317655 CDS YP_615271.1 103485710 4082130 223965..224210 1 NC_008048.1 hypothetical protein 224210 4082130 Sala_0214 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615271.1 223965 D 317655 CDS YP_615272.1 103485711 4082131 224369..224779 1 NC_008048.1 Fe-S metabolism associated SufE 224779 4082131 Sala_0215 Sphingopyxis alaskensis RB2256 Fe-S metabolism associated SufE YP_615272.1 224369 D 317655 CDS YP_615273.1 103485712 4082132 complement(224784..226157) 1 NC_008048.1 hypothetical protein 226157 4082132 Sala_0216 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615273.1 224784 R 317655 CDS YP_615274.1 103485713 4082997 226308..227210 1 NC_008048.1 hypothetical protein 227210 4082997 Sala_0217 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615274.1 226308 D 317655 CDS YP_615275.1 103485714 4082998 227230..227439 1 NC_008048.1 hypothetical protein 227439 4082998 Sala_0218 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615275.1 227230 D 317655 CDS YP_615276.1 103485715 4082999 227478..227720 1 NC_008048.1 hypothetical protein 227720 4082999 Sala_0219 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615276.1 227478 D 317655 CDS YP_615277.1 103485716 4083000 complement(227943..229475) 1 NC_008048.1 AMP-dependent synthetase and ligase 229475 4083000 Sala_0220 Sphingopyxis alaskensis RB2256 AMP-dependent synthetase and ligase YP_615277.1 227943 R 317655 CDS YP_615278.1 103485717 4083001 229680..231212 1 NC_008048.1 AMP-dependent synthetase and ligase 231212 4083001 Sala_0221 Sphingopyxis alaskensis RB2256 AMP-dependent synthetase and ligase YP_615278.1 229680 D 317655 CDS YP_615279.1 103485718 4083002 231217..231849 1 NC_008048.1 DSBA oxidoreductase 231849 4083002 Sala_0222 Sphingopyxis alaskensis RB2256 DSBA oxidoreductase YP_615279.1 231217 D 317655 CDS YP_615280.1 103485719 4083003 231846..232649 1 NC_008048.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 232649 4083003 Sala_0223 Sphingopyxis alaskensis RB2256 enoyl-CoA hydratase YP_615280.1 231846 D 317655 CDS YP_615281.1 103485720 4083004 232707..233657 1 NC_008048.1 integrase catalytic subunit 233657 4083004 Sala_0224 Sphingopyxis alaskensis RB2256 integrase catalytic subunit YP_615281.1 232707 D 317655 CDS YP_615282.1 103485721 4083005 complement(233676..234170) 1 NC_008048.1 transposase, IS4 234170 4083005 Sala_0225 Sphingopyxis alaskensis RB2256 transposase, IS4 YP_615282.1 233676 R 317655 CDS YP_615283.1 103485722 4083006 234305..234520 1 NC_008048.1 hypothetical protein 234520 4083006 Sala_0226 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615283.1 234305 D 317655 CDS YP_615284.1 103485723 4083007 complement(234774..236156) 1 NC_008048.1 hypothetical protein 236156 4083007 Sala_0227 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615284.1 234774 R 317655 CDS YP_615285.1 103485724 4083008 236380..237585 1 NC_008048.1 group 1 glycosyl transferase 237585 4083008 Sala_0228 Sphingopyxis alaskensis RB2256 group 1 glycosyl transferase YP_615285.1 236380 D 317655 CDS YP_615286.1 103485725 4083009 237638..238447 1 NC_008048.1 hypothetical protein 238447 4083009 Sala_0229 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615286.1 237638 D 317655 CDS YP_615287.1 103485726 4083010 complement(238516..238764) 1 NC_008048.1 hypothetical protein 238764 4083010 Sala_0230 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615287.1 238516 R 317655 CDS YP_615288.1 103485727 4083011 complement(238839..239060) 1 NC_008048.1 hypothetical protein 239060 4083011 Sala_0231 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615288.1 238839 R 317655 CDS YP_615289.1 103485728 4083012 239198..239866 1 NC_008048.1 putative phage repressor 239866 4083012 Sala_0232 Sphingopyxis alaskensis RB2256 putative phage repressor YP_615289.1 239198 D 317655 CDS YP_615290.1 103485729 4083013 complement(239874..240182) 1 NC_008048.1 hypothetical protein 240182 4083013 Sala_0233 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615290.1 239874 R 317655 CDS YP_615291.1 103485730 4083014 240430..241647 1 NC_008048.1 methyl-accepting chemotaxis sensory transducer 241647 4083014 Sala_0234 Sphingopyxis alaskensis RB2256 methyl-accepting chemotaxis sensory transducer YP_615291.1 240430 D 317655 CDS YP_615292.1 103485731 4083015 241747..242472 1 NC_008048.1 MIP family channel protein 242472 4083015 Sala_0235 Sphingopyxis alaskensis RB2256 MIP family channel protein YP_615292.1 241747 D 317655 CDS YP_615293.1 103485732 4083095 complement(242510..243373) 1 NC_008048.1 UTP-glucose-1-phosphate uridylyltransferase 243373 4083095 Sala_0236 Sphingopyxis alaskensis RB2256 UTP-glucose-1-phosphate uridylyltransferase YP_615293.1 242510 R 317655 CDS YP_615294.1 103485733 4083096 complement(243434..243946) 1 NC_008048.1 OmpA/MotB protein 243946 4083096 Sala_0237 Sphingopyxis alaskensis RB2256 OmpA/MotB protein YP_615294.1 243434 R 317655 CDS YP_615295.1 103485734 4083097 complement(243964..245190) 1 NC_008048.1 diguanylate cyclase 245190 4083097 Sala_0238 Sphingopyxis alaskensis RB2256 diguanylate cyclase YP_615295.1 243964 R 317655 CDS YP_615296.1 103485735 4083098 complement(245187..245720) 1 NC_008048.1 hypothetical protein 245720 4083098 Sala_0239 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615296.1 245187 R 317655 CDS YP_615297.1 103485736 4083099 complement(245964..246497) 1 NC_008048.1 peptide methionine sulfoxide reductase 246497 4083099 Sala_0240 Sphingopyxis alaskensis RB2256 peptide methionine sulfoxide reductase YP_615297.1 245964 R 317655 CDS YP_615298.1 103485737 4083100 complement(246555..247547) 1 NC_008048.1 peptidase M48, Ste24p 247547 4083100 Sala_0241 Sphingopyxis alaskensis RB2256 peptidase M48, Ste24p YP_615298.1 246555 R 317655 CDS YP_615299.1 103485738 4083101 247661..248728 1 NC_008048.1 cytochrome oxidase assembly 248728 4083101 Sala_0242 Sphingopyxis alaskensis RB2256 cytochrome oxidase assembly YP_615299.1 247661 D 317655 CDS YP_615300.1 103485739 4083102 248893..249372 1 NC_008048.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 249372 rplM 4083102 rplM Sphingopyxis alaskensis RB2256 50S ribosomal protein L13 YP_615300.1 248893 D 317655 CDS YP_615301.1 103485740 4083103 249372..249869 1 NC_008048.1 forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 249869 rpsI 4083103 rpsI Sphingopyxis alaskensis RB2256 30S ribosomal protein S9 YP_615301.1 249372 D 317655 CDS YP_615302.1 103485741 4083104 complement(249945..250763) 1 NC_008048.1 short-chain dehydrogenase/reductase SDR 250763 4083104 Sala_0245 Sphingopyxis alaskensis RB2256 short-chain dehydrogenase/reductase SDR YP_615302.1 249945 R 317655 CDS YP_615303.1 103485742 4083105 251077..251604 1 NC_008048.1 CarD family transcriptional regulator 251604 4083105 Sala_0247 Sphingopyxis alaskensis RB2256 CarD family transcriptional regulator YP_615303.1 251077 D 317655 CDS YP_615304.1 103485743 4083106 complement(251833..252573) 1 NC_008048.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 252573 truA 4083106 truA Sphingopyxis alaskensis RB2256 tRNA pseudouridine synthase A YP_615304.1 251833 R 317655 CDS YP_615305.1 103485744 4083107 complement(252742..253662) 1 NC_008048.1 methionyl-tRNA formyltransferase 253662 4083107 Sala_0249 Sphingopyxis alaskensis RB2256 methionyl-tRNA formyltransferase YP_615305.1 252742 R 317655 CDS YP_615306.1 103485745 4083108 253889..254485 1 NC_008048.1 involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 254485 recR 4083108 recR Sphingopyxis alaskensis RB2256 recombination protein RecR YP_615306.1 253889 D 317655 CDS YP_615307.1 103485746 4083109 254531..255073 1 NC_008048.1 peptide deformylase 255073 4083109 Sala_0251 Sphingopyxis alaskensis RB2256 peptide deformylase YP_615307.1 254531 D 317655 CDS YP_615308.1 103485747 4083110 complement(255275..255820) 1 NC_008048.1 GrpE protein HSP-70 cofactor 255820 4083110 Sala_0252 Sphingopyxis alaskensis RB2256 GrpE protein HSP-70 cofactor YP_615308.1 255275 R 317655 CDS YP_615309.1 103485748 4083111 complement(255834..256877) 1 NC_008048.1 Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor 256877 hrcA 4083111 hrcA Sphingopyxis alaskensis RB2256 heat-inducible transcription repressor YP_615309.1 255834 R 317655 CDS YP_615310.1 103485749 4083112 256982..257698 1 NC_008048.1 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH 257698 rph 4083112 rph Sphingopyxis alaskensis RB2256 ribonuclease PH YP_615310.1 256982 D 317655 CDS YP_615311.1 103485750 4083113 257743..258192 1 NC_008048.1 hypothetical protein 258192 4083113 Sala_0255 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615311.1 257743 D 317655 CDS YP_615312.1 103485751 4083114 258297..258668 1 NC_008048.1 hypothetical protein 258668 4083114 Sala_0256 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615312.1 258297 D 317655 CDS YP_615313.1 103485752 4081205 258677..259309 1 NC_008048.1 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; putative deoxyribonucleotide triphosphate pyrophosphatase 259309 4081205 Sala_0257 Sphingopyxis alaskensis RB2256 putative deoxyribonucleotide triphosphate pyrophosphatase YP_615313.1 258677 D 317655 CDS YP_615314.1 103485753 4081206 259318..260463 1 NC_008048.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 260463 4081206 Sala_0258 Sphingopyxis alaskensis RB2256 coproporphyrinogen III oxidase YP_615314.1 259318 D 317655 CDS YP_615315.1 103485754 4081207 260564..261457 1 NC_008048.1 phage integrase 261457 4081207 Sala_0259 Sphingopyxis alaskensis RB2256 phage integrase YP_615315.1 260564 D 317655 CDS YP_615316.1 103485755 4081208 complement(261537..262145) 1 NC_008048.1 alkaline phosphatase-like protein 262145 4081208 Sala_0260 Sphingopyxis alaskensis RB2256 alkaline phosphatase-like protein YP_615316.1 261537 R 317655 CDS YP_615317.1 103485756 4081209 complement(262302..263255) 1 NC_008048.1 catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase 263255 4081209 Sala_0261 Sphingopyxis alaskensis RB2256 glutathione synthetase YP_615317.1 262302 R 317655 CDS YP_615318.1 103485757 4081210 complement(263409..263759) 1 NC_008048.1 hypothetical protein 263759 4081210 Sala_0262 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615318.1 263409 R 317655 CDS YP_615319.1 103485758 4081211 complement(263756..264616) 1 NC_008048.1 hypothetical protein 264616 4081211 Sala_0263 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615319.1 263756 R 317655 CDS YP_615320.1 103485759 4081212 264693..265829 1 NC_008048.1 extracellular ligand-binding receptor 265829 4081212 Sala_0264 Sphingopyxis alaskensis RB2256 extracellular ligand-binding receptor YP_615320.1 264693 D 317655 CDS YP_615321.1 103485760 4081213 266016..266537 1 NC_008048.1 IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 266537 infC 4081213 infC Sphingopyxis alaskensis RB2256 translation initiation factor IF-3 YP_615321.1 266016 D 317655 CDS YP_615322.1 103485761 4081214 complement(266656..267354) 1 NC_008048.1 hypothetical protein 267354 4081214 Sala_0266 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615322.1 266656 R 317655 CDS YP_615323.1 103485762 4081215 267452..268006 1 NC_008048.1 hypothetical protein 268006 4081215 Sala_0267 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615323.1 267452 D 317655 CDS YP_615324.1 103485763 4081216 268018..268626 1 NC_008048.1 TetR family transcriptional regulator 268626 4081216 Sala_0268 Sphingopyxis alaskensis RB2256 TetR family transcriptional regulator YP_615324.1 268018 D 317655 CDS YP_615325.1 103485764 4081217 268649..269086 1 NC_008048.1 hypothetical protein 269086 4081217 Sala_0269 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615325.1 268649 D 317655 CDS YP_615326.1 103485765 4081218 complement(269295..270797) 1 NC_008048.1 peptidase S10, serine carboxypeptidase 270797 4081218 Sala_0270 Sphingopyxis alaskensis RB2256 peptidase S10, serine carboxypeptidase YP_615326.1 269295 R 317655 CDS YP_615327.1 103485766 4081219 complement(270915..271136) 1 NC_008048.1 hypothetical protein 271136 4081219 Sala_0271 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615327.1 270915 R 317655 CDS YP_615328.1 103485767 4081220 complement(271136..271456) 1 NC_008048.1 XRE family plasmid maintenance system antidote protein 271456 4081220 Sala_0272 Sphingopyxis alaskensis RB2256 XRE family plasmid maintenance system antidote protein YP_615328.1 271136 R 317655 CDS YP_615329.1 103485768 4081221 complement(271425..271712) 1 NC_008048.1 plasmid maintenance system killer protein 271712 4081221 Sala_0273 Sphingopyxis alaskensis RB2256 plasmid maintenance system killer protein YP_615329.1 271425 R 317655 CDS YP_615330.1 103485769 4081222 complement(271719..272333) 1 NC_008048.1 hypothetical protein 272333 4081222 Sala_0274 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615330.1 271719 R 317655 CDS YP_615331.1 103485770 4081223 complement(272384..274570) 1 NC_008048.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 274570 4081223 Sala_0275 Sphingopyxis alaskensis RB2256 excinuclease ABC subunit B YP_615331.1 272384 R 317655 CDS YP_615332.1 103485771 4082636 274612..275166 1 NC_008048.1 hypothetical protein 275166 4082636 Sala_0276 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615332.1 274612 D 317655 CDS YP_615333.1 103485772 4082637 275245..275643 1 NC_008048.1 glyoxalase/bleomycin resistance protein/dioxygenase 275643 4082637 Sala_0277 Sphingopyxis alaskensis RB2256 glyoxalase/bleomycin resistance protein/dioxygenase YP_615333.1 275245 D 317655 CDS YP_615334.1 103485773 4082638 275731..276063 1 NC_008048.1 hypothetical protein 276063 4082638 Sala_0278 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615334.1 275731 D 317655 CDS YP_615335.1 103485774 4082639 276172..277917 1 NC_008048.1 hypothetical protein 277917 4082639 Sala_0279 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615335.1 276172 D 317655 CDS YP_615336.1 103485775 4082640 278152..278388 1 NC_008048.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 278388 acpP 4082640 acpP Sphingopyxis alaskensis RB2256 acyl carrier protein YP_615336.1 278152 D 317655 CDS YP_615337.1 103485776 4082641 278556..279815 1 NC_008048.1 beta-ketoacyl synthase 279815 4082641 Sala_0281 Sphingopyxis alaskensis RB2256 beta-ketoacyl synthase YP_615337.1 278556 D 317655 CDS YP_615338.1 103485777 4082642 complement(280014..280763) 1 NC_008048.1 hypothetical protein 280763 4082642 Sala_0282 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615338.1 280014 R 317655 CDS YP_615339.1 103485778 4082643 complement(280774..281907) 1 NC_008048.1 glucose sorbosone dehydrogenase 281907 4082643 Sala_0283 Sphingopyxis alaskensis RB2256 glucose sorbosone dehydrogenase YP_615339.1 280774 R 317655 CDS YP_615340.1 103485779 4082644 complement(282062..282697) 1 NC_008048.1 ECF subfamily RNA polymerase sigma-24 factor 282697 4082644 Sala_0284 Sphingopyxis alaskensis RB2256 ECF subfamily RNA polymerase sigma-24 factor YP_615340.1 282062 R 317655 CDS YP_615341.1 103485780 4082645 283107..283532 1 NC_008048.1 hypothetical protein 283532 4082645 Sala_0285 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615341.1 283107 D 317655 CDS YP_615342.1 103485781 4082646 283576..284211 1 NC_008048.1 ECF subfamily RNA polymerase sigma-24 factor 284211 4082646 Sala_0286 Sphingopyxis alaskensis RB2256 ECF subfamily RNA polymerase sigma-24 factor YP_615342.1 283576 D 317655 CDS YP_615343.1 103485782 4082647 complement(284220..285014) 1 NC_008048.1 in Caulobacter crescentus, CC3477 is differentially expressed in minimal salts media with glucose as compared to complex media; two-component response regulator 285014 4082647 Sala_0287 Sphingopyxis alaskensis RB2256 two-component response regulator YP_615343.1 284220 R 317655 CDS YP_615344.1 103485783 4082648 285198..286742 1 NC_008048.1 signal transduction histidine kinase 286742 4082648 Sala_0288 Sphingopyxis alaskensis RB2256 signal transduction histidine kinase YP_615344.1 285198 D 317655 CDS YP_615345.1 103485784 4082649 286755..287768 1 NC_008048.1 putative mRNA 3-end processing factor 287768 4082649 Sala_0289 Sphingopyxis alaskensis RB2256 putative mRNA 3-end processing factor YP_615345.1 286755 D 317655 CDS YP_615346.1 103485785 4082650 287765..289417 1 NC_008048.1 catalyzes the ATP-dependent formation of a phosphodiester at the site of a single strand break in duplex DNA; ATP-dependent DNA ligase 289417 4082650 Sala_0290 Sphingopyxis alaskensis RB2256 ATP-dependent DNA ligase YP_615346.1 287765 D 317655 CDS YP_615347.1 103485786 4082651 289605..290231 1 NC_008048.1 superoxide dismutase 290231 4082651 Sala_0291 Sphingopyxis alaskensis RB2256 superoxide dismutase YP_615347.1 289605 D 317655 CDS YP_615348.1 103485787 4082652 290401..291780 1 NC_008048.1 L-serine dehydratase 1 291780 4082652 Sala_0292 Sphingopyxis alaskensis RB2256 L-serine dehydratase 1 YP_615348.1 290401 D 317655 CDS YP_615349.1 103485788 4082653 291790..292056 1 NC_008048.1 hypothetical protein 292056 4082653 Sala_0293 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615349.1 291790 D 317655 CDS YP_615350.1 103485789 4082654 complement(292085..294085) 1 NC_008048.1 glucose-methanol-choline oxidoreductase 294085 4082654 Sala_0294 Sphingopyxis alaskensis RB2256 glucose-methanol-choline oxidoreductase YP_615350.1 292085 R 317655 CDS YP_615351.1 103485790 4082655 complement(294188..295087) 1 NC_008048.1 cation diffusion facilitator family transporter 295087 4082655 Sala_0295 Sphingopyxis alaskensis RB2256 cation diffusion facilitator family transporter YP_615351.1 294188 R 317655 CDS YP_615352.1 103485791 4082859 complement(295097..295369) 1 NC_008048.1 hypothetical protein 295369 4082859 Sala_0296 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615352.1 295097 R 317655 CDS YP_615353.1 103485792 4082860 295766..296542 1 NC_008048.1 short-chain dehydrogenase/reductase SDR 296542 4082860 Sala_0297 Sphingopyxis alaskensis RB2256 short-chain dehydrogenase/reductase SDR YP_615353.1 295766 D 317655 CDS YP_615354.1 103485793 4082861 296539..297327 1 NC_008048.1 enoyl-CoA hydratase/isomerase 297327 4082861 Sala_0298 Sphingopyxis alaskensis RB2256 enoyl-CoA hydratase/isomerase YP_615354.1 296539 D 317655 CDS YP_615355.1 103485794 4082862 297402..299231 1 NC_008048.1 sulfatase 299231 4082862 Sala_0299 Sphingopyxis alaskensis RB2256 sulfatase YP_615355.1 297402 D 317655 CDS YP_615356.1 103485795 4082863 complement(299483..300412) 1 NC_008048.1 hypothetical protein 300412 4082863 Sala_0300 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615356.1 299483 R 317655 CDS YP_615357.1 103485796 4082864 complement(300409..301032) 1 NC_008048.1 TetR family transcriptional regulator 301032 4082864 Sala_0301 Sphingopyxis alaskensis RB2256 TetR family transcriptional regulator YP_615357.1 300409 R 317655 CDS YP_615358.1 103485797 4082865 301155..302786 1 NC_008048.1 sulfatase 302786 4082865 Sala_0302 Sphingopyxis alaskensis RB2256 sulfatase YP_615358.1 301155 D 317655 CDS YP_615359.1 103485798 4082866 302837..303844 1 NC_008048.1 LacI family transcriptional regulator 303844 4082866 Sala_0303 Sphingopyxis alaskensis RB2256 LacI family transcriptional regulator YP_615359.1 302837 D 317655 CDS YP_615360.1 103485799 4082867 303981..306941 1 NC_008048.1 beta-phosphoglucomutase 306941 4082867 Sala_0304 Sphingopyxis alaskensis RB2256 beta-phosphoglucomutase YP_615360.1 303981 D 317655 CDS YP_615361.1 103485800 4082868 306935..309295 1 NC_008048.1 TonB-dependent receptor 309295 4082868 Sala_0305 Sphingopyxis alaskensis RB2256 TonB-dependent receptor YP_615361.1 306935 D 317655 CDS YP_615362.1 103485801 4082869 309459..310688 1 NC_008048.1 major facilitator superfamily transporter 310688 4082869 Sala_0306 Sphingopyxis alaskensis RB2256 major facilitator superfamily transporter YP_615362.1 309459 D 317655 CDS YP_615363.1 103485802 4082870 311012..311851 1 NC_008048.1 amidohydrolase 2 311851 4082870 Sala_0307 Sphingopyxis alaskensis RB2256 amidohydrolase 2 YP_615363.1 311012 D 317655 CDS YP_615364.1 103485803 4082871 complement(311952..313118) 1 NC_008048.1 iron-containing alcohol dehydrogenase 313118 4082871 Sala_0308 Sphingopyxis alaskensis RB2256 iron-containing alcohol dehydrogenase YP_615364.1 311952 R 317655 CDS YP_615365.1 103485804 4082872 complement(313173..314231) 1 NC_008048.1 putative lipoprotein signal peptide 314231 4082872 Sala_0309 Sphingopyxis alaskensis RB2256 putative lipoprotein signal peptide YP_615365.1 313173 R 317655 CDS YP_615366.1 103485805 4082873 complement(314307..315344) 1 NC_008048.1 XRE family transcriptional regulator 315344 4082873 Sala_0310 Sphingopyxis alaskensis RB2256 XRE family transcriptional regulator YP_615366.1 314307 R 317655 CDS YP_615367.1 103485806 4082874 315471..316313 1 NC_008048.1 XRE family transcriptional regulator 316313 4082874 Sala_0311 Sphingopyxis alaskensis RB2256 XRE family transcriptional regulator YP_615367.1 315471 D 317655 CDS YP_615368.1 103485807 4082876 316747..318324 1 NC_008048.1 hypothetical protein 318324 4082876 Sala_0312 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615368.1 316747 D 317655 CDS YP_615369.1 103485808 4082344 318409..321102 1 NC_008048.1 TonB-dependent receptor 321102 4082344 Sala_0313 Sphingopyxis alaskensis RB2256 TonB-dependent receptor YP_615369.1 318409 D 317655 CDS YP_615370.1 103485809 4082345 321266..322132 1 NC_008048.1 type II secretion system protein C 322132 4082345 Sala_0314 Sphingopyxis alaskensis RB2256 type II secretion system protein C YP_615370.1 321266 D 317655 CDS YP_615371.1 103485810 4082346 322138..324336 1 NC_008048.1 type II and III secretion system protein 324336 4082346 Sala_0315 Sphingopyxis alaskensis RB2256 type II and III secretion system protein YP_615371.1 322138 D 317655 CDS YP_615372.1 103485811 4082347 324333..325826 1 NC_008048.1 type II secretion system protein E 325826 4082347 Sala_0316 Sphingopyxis alaskensis RB2256 type II secretion system protein E YP_615372.1 324333 D 317655 CDS YP_615373.1 103485812 4082348 325819..327036 1 NC_008048.1 general secretion pathway protein F 327036 4082348 Sala_0317 Sphingopyxis alaskensis RB2256 general secretion pathway protein F YP_615373.1 325819 D 317655 CDS YP_615374.1 103485813 4082349 327040..327531 1 NC_008048.1 general secretion pathway protein G 327531 4082349 Sala_0318 Sphingopyxis alaskensis RB2256 general secretion pathway protein G YP_615374.1 327040 D 317655 CDS YP_615375.1 103485814 4082350 327506..327994 1 NC_008048.1 general secretion pathway protein H 327994 4082350 Sala_0319 Sphingopyxis alaskensis RB2256 general secretion pathway protein H YP_615375.1 327506 D 317655 CDS YP_615376.1 103485815 4082351 327984..328361 1 NC_008048.1 general secretion pathway protein I 328361 4082351 Sala_0320 Sphingopyxis alaskensis RB2256 general secretion pathway protein I YP_615376.1 327984 D 317655 CDS YP_615377.1 103485816 4082352 328358..328969 1 NC_008048.1 general secretion pathway protein J 328969 4082352 Sala_0321 Sphingopyxis alaskensis RB2256 general secretion pathway protein J YP_615377.1 328358 D 317655 CDS YP_615378.1 103485817 4082353 328966..329970 1 NC_008048.1 general secretion pathway protein K 329970 4082353 Sala_0322 Sphingopyxis alaskensis RB2256 general secretion pathway protein K YP_615378.1 328966 D 317655 CDS YP_615379.1 103485818 4082354 329984..331117 1 NC_008048.1 general secretion pathway L 331117 4082354 Sala_0323 Sphingopyxis alaskensis RB2256 general secretion pathway L YP_615379.1 329984 D 317655 CDS YP_615380.1 103485819 4082355 331114..331596 1 NC_008048.1 hypothetical protein 331596 4082355 Sala_0324 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615380.1 331114 D 317655 CDS YP_615381.1 103485820 4082356 331593..332309 1 NC_008048.1 type II secretion system protein N 332309 4082356 Sala_0325 Sphingopyxis alaskensis RB2256 type II secretion system protein N YP_615381.1 331593 D 317655 CDS YP_615382.1 103485821 4082357 332423..333205 1 NC_008048.1 peptidase A24A, prepilin type IV 333205 4082357 Sala_0326 Sphingopyxis alaskensis RB2256 peptidase A24A, prepilin type IV YP_615382.1 332423 D 317655 CDS YP_615383.1 103485822 4082358 complement(333192..333704) 1 NC_008048.1 OmpA/MotB protein 333704 4082358 Sala_0327 Sphingopyxis alaskensis RB2256 OmpA/MotB protein YP_615383.1 333192 R 317655 CDS YP_615384.1 103485823 4082359 complement(333811..335175) 1 NC_008048.1 forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB 335175 tolB 4082359 tolB Sphingopyxis alaskensis RB2256 translocation protein TolB YP_615384.1 333811 R 317655 CDS YP_615385.1 103485824 4082360 complement(335181..336002) 1 NC_008048.1 hypothetical protein 336002 4082360 Sala_0329 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615385.1 335181 R 317655 CDS YP_615386.1 103485825 4082361 complement(336012..336533) 1 NC_008048.1 biopolymer transport protein ExbD/TolR 336533 4082361 Sala_0330 Sphingopyxis alaskensis RB2256 biopolymer transport protein ExbD/TolR YP_615386.1 336012 R 317655 CDS YP_615387.1 103485826 4082362 complement(336533..337231) 1 NC_008048.1 MotA/TolQ/ExbB proton channel 337231 4082362 Sala_0331 Sphingopyxis alaskensis RB2256 MotA/TolQ/ExbB proton channel YP_615387.1 336533 R 317655 CDS YP_615388.1 103485827 4082363 complement(337225..337704) 1 NC_008048.1 4-hydroxybenzoyl-CoA thioesterase 337704 4082363 Sala_0332 Sphingopyxis alaskensis RB2256 4-hydroxybenzoyl-CoA thioesterase YP_615388.1 337225 R 317655 CDS YP_615389.1 103485828 4081031 complement(337887..338903) 1 NC_008048.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 338903 ruvB 4081031 ruvB Sphingopyxis alaskensis RB2256 Holliday junction DNA helicase RuvB YP_615389.1 337887 R 317655 CDS YP_615390.1 103485829 4081032 complement(339108..339512) 1 NC_008048.1 glutathione-dependent formaldehyde-activating protein 339512 4081032 Sala_0334 Sphingopyxis alaskensis RB2256 glutathione-dependent formaldehyde-activating protein YP_615390.1 339108 R 317655 CDS YP_615391.1 103485830 4081033 complement(339509..340108) 1 NC_008048.1 plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 340108 ruvA 4081033 ruvA Sphingopyxis alaskensis RB2256 Holliday junction DNA helicase RuvA YP_615391.1 339509 R 317655 CDS YP_615392.1 103485831 4081034 complement(340421..340891) 1 NC_008048.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 340891 ruvC 4081034 ruvC Sphingopyxis alaskensis RB2256 Holliday junction resolvase YP_615392.1 340421 R 317655 CDS YP_615393.1 103485832 4081035 complement(341031..341777) 1 NC_008048.1 hypothetical protein 341777 4081035 Sala_0337 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615393.1 341031 R 317655 CDS YP_615394.1 103485833 4081036 complement(341949..342266) 1 NC_008048.1 hypothetical protein 342266 4081036 Sala_0338 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615394.1 341949 R 317655 CDS YP_615395.1 103485834 4081037 complement(342320..342562) 1 NC_008048.1 hypothetical protein 342562 4081037 Sala_0339 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615395.1 342320 R 317655 CDS YP_615396.1 103485835 4081038 complement(342618..342947) 1 NC_008048.1 hypothetical protein 342947 4081038 Sala_0340 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615396.1 342618 R 317655 CDS YP_615397.1 103485836 4081039 343046..344500 1 NC_008048.1 pyruvate kinase 344500 4081039 Sala_0341 Sphingopyxis alaskensis RB2256 pyruvate kinase YP_615397.1 343046 D 317655 CDS YP_615398.1 103485837 4081040 344728..345501 1 NC_008048.1 Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; arginyl-tRNA-protein transferase 345501 4081040 Sala_0342 Sphingopyxis alaskensis RB2256 arginyl-tRNA-protein transferase YP_615398.1 344728 D 317655 CDS YP_615399.1 103485838 4081041 345792..348227 1 NC_008048.1 cyclic nucleotide-binding protein 348227 4081041 Sala_0343 Sphingopyxis alaskensis RB2256 cyclic nucleotide-binding protein YP_615399.1 345792 D 317655 CDS YP_615400.1 103485839 4081042 348227..349108 1 NC_008048.1 hypothetical protein 349108 4081042 Sala_0344 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615400.1 348227 D 317655 CDS YP_615401.1 103485840 4081043 349119..351053 1 NC_008048.1 hypothetical protein 351053 4081043 Sala_0345 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615401.1 349119 D 317655 CDS YP_615402.1 103485841 4081044 351095..351943 1 NC_008048.1 metallophosphoesterase 351943 4081044 Sala_0346 Sphingopyxis alaskensis RB2256 metallophosphoesterase YP_615402.1 351095 D 317655 CDS YP_615403.1 103485842 4081045 complement(352006..352950) 1 NC_008048.1 D-isomer specific 2-hydroxyacid dehydrogenase 352950 4081045 Sala_0347 Sphingopyxis alaskensis RB2256 D-isomer specific 2-hydroxyacid dehydrogenase YP_615403.1 352006 R 317655 CDS YP_615404.1 103485843 4081046 complement(352947..353393) 1 NC_008048.1 hypothetical protein 353393 4081046 Sala_0348 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615404.1 352947 R 317655 CDS YP_615405.1 103485844 4081047 complement(353461..355044) 1 NC_008048.1 cysteinyl-tRNA synthetase 355044 4081047 Sala_0349 Sphingopyxis alaskensis RB2256 cysteinyl-tRNA synthetase YP_615405.1 353461 R 317655 CDS YP_615406.1 103485845 4081048 complement(355082..361354) 1 NC_008048.1 hypothetical protein 361354 4081048 Sala_0350 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615406.1 355082 R 317655 CDS YP_615407.1 103485846 4081049 complement(361358..363181) 1 NC_008048.1 hemolysin activation/secretion protein-like protein 363181 4081049 Sala_0351 Sphingopyxis alaskensis RB2256 hemolysin activation/secretion protein-like protein YP_615407.1 361358 R 317655 CDS YP_615408.1 103485847 4081224 complement(363365..364129) 1 NC_008048.1 hypothetical protein 364129 4081224 Sala_0352 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615408.1 363365 R 317655 CDS YP_615409.1 103485848 4081225 complement(364116..366215) 1 NC_008048.1 adenylate/guanylate cyclase 366215 4081225 Sala_0353 Sphingopyxis alaskensis RB2256 adenylate/guanylate cyclase YP_615409.1 364116 R 317655 CDS YP_615410.1 103485849 4081226 complement(366220..369297) 1 NC_008048.1 hypothetical protein 369297 4081226 Sala_0354 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615410.1 366220 R 317655 CDS YP_615411.1 103485850 4081227 369519..369845 1 NC_008048.1 hypothetical protein 369845 4081227 Sala_0355 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615411.1 369519 D 317655 CDS YP_615412.1 103485851 4081228 369856..370089 1 NC_008048.1 BolA-like protein 370089 4081228 Sala_0356 Sphingopyxis alaskensis RB2256 BolA-like protein YP_615412.1 369856 D 317655 CDS YP_615413.1 103485852 4081229 370140..370472 1 NC_008048.1 glutaredoxin-like protein 370472 4081229 Sala_0357 Sphingopyxis alaskensis RB2256 glutaredoxin-like protein YP_615413.1 370140 D 317655 CDS YP_615414.1 103485853 4081230 complement(370540..370914) 1 NC_008048.1 17 kDa surface antigen 370914 4081230 Sala_0358 Sphingopyxis alaskensis RB2256 17 kDa surface antigen YP_615414.1 370540 R 317655 CDS YP_615415.1 103485854 4081231 371373..371741 1 NC_008048.1 CopY family transcriptional regulator 371741 4081231 Sala_0359 Sphingopyxis alaskensis RB2256 CopY family transcriptional regulator YP_615415.1 371373 D 317655 CDS YP_615416.1 103485855 4081232 371738..373411 1 NC_008048.1 peptidase M56, BlaR1 373411 4081232 Sala_0360 Sphingopyxis alaskensis RB2256 peptidase M56, BlaR1 YP_615416.1 371738 D 317655 CDS YP_615417.1 103485856 4081233 373691..374611 1 NC_008048.1 beta-lactamase-like protein 374611 4081233 Sala_0361 Sphingopyxis alaskensis RB2256 beta-lactamase-like protein YP_615417.1 373691 D 317655 CDS YP_615418.1 103485857 4081234 374608..375207 1 NC_008048.1 hypothetical protein 375207 4081234 Sala_0362 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615418.1 374608 D 317655 CDS YP_615419.1 103485858 4081235 complement(375224..375421) 1 NC_008048.1 hypothetical protein 375421 4081235 Sala_0363 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615419.1 375224 R 317655 CDS YP_615420.1 103485859 4081236 375523..376521 1 NC_008048.1 zinc-binding alcohol dehydrogenase 376521 4081236 Sala_0364 Sphingopyxis alaskensis RB2256 zinc-binding alcohol dehydrogenase YP_615420.1 375523 D 317655 CDS YP_615421.1 103485860 4081237 complement(376582..377292) 1 NC_008048.1 ACP phosphodiesterase 377292 4081237 Sala_0365 Sphingopyxis alaskensis RB2256 ACP phosphodiesterase YP_615421.1 376582 R 317655 CDS YP_615422.1 103485861 4081238 377378..378283 1 NC_008048.1 LysR family transcriptional regulator 378283 4081238 Sala_0366 Sphingopyxis alaskensis RB2256 LysR family transcriptional regulator YP_615422.1 377378 D 317655 CDS YP_615423.1 103485862 4081239 378392..379054 1 NC_008048.1 hypothetical protein 379054 4081239 Sala_0367 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615423.1 378392 D 317655 CDS YP_615424.1 103485863 4081240 379182..380306 1 NC_008048.1 beta-lactamase-like protein 380306 4081240 Sala_0368 Sphingopyxis alaskensis RB2256 beta-lactamase-like protein YP_615424.1 379182 D 317655 CDS YP_615425.1 103485864 4081241 complement(380313..381038) 1 NC_008048.1 hypothetical protein 381038 4081241 Sala_0369 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615425.1 380313 R 317655 CDS YP_615426.1 103485865 4081242 381679..382677 1 NC_008048.1 hypothetical protein 382677 4081242 Sala_0370 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615426.1 381679 D 317655 CDS YP_615427.1 103485866 4081243 complement(382830..383288) 1 NC_008048.1 glyoxalase/bleomycin resistance protein/dioxygenase 383288 4081243 Sala_0371 Sphingopyxis alaskensis RB2256 glyoxalase/bleomycin resistance protein/dioxygenase YP_615427.1 382830 R 317655 CDS YP_615428.1 103485867 4081959 complement(383285..384829) 1 NC_008048.1 twin-arginine translocation pathway signal 384829 4081959 Sala_0372 Sphingopyxis alaskensis RB2256 twin-arginine translocation pathway signal YP_615428.1 383285 R 317655 CDS YP_615429.1 103485868 4081960 385276..386121 1 NC_008048.1 short-chain dehydrogenase/reductase SDR 386121 4081960 Sala_0373 Sphingopyxis alaskensis RB2256 short-chain dehydrogenase/reductase SDR YP_615429.1 385276 D 317655 CDS YP_615430.1 103485869 4081961 complement(386090..387613) 1 NC_008048.1 tartrate/fumarate subfamily Fe-S type hydro-lyase subunit alpha 387613 4081961 Sala_0374 Sphingopyxis alaskensis RB2256 tartrate/fumarate subfamily Fe-S type hydro-lyase subunit alpha YP_615430.1 386090 R 317655 CDS YP_615431.1 103485870 4081962 387785..388240 1 NC_008048.1 hypothetical protein 388240 4081962 Sala_0375 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615431.1 387785 D 317655 CDS YP_615432.1 103485871 4081963 388342..388806 1 NC_008048.1 ferric uptake regulator family protein 388806 4081963 Sala_0376 Sphingopyxis alaskensis RB2256 ferric uptake regulator family protein YP_615432.1 388342 D 317655 CDS YP_615433.1 103485872 4081964 388838..389599 1 NC_008048.1 hypothetical protein 389599 4081964 Sala_0377 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615433.1 388838 D 317655 CDS YP_615434.1 103485873 4081965 389645..390484 1 NC_008048.1 methionine aminopeptidase 390484 4081965 Sala_0378 Sphingopyxis alaskensis RB2256 methionine aminopeptidase YP_615434.1 389645 D 317655 CDS YP_615435.1 103485874 4081966 390686..392869 1 NC_008048.1 Pyrrolo-quinoline quinone 392869 4081966 Sala_0379 Sphingopyxis alaskensis RB2256 Pyrrolo-quinoline quinone YP_615435.1 390686 D 317655 CDS YP_615436.1 103485875 4081967 complement(393186..393380) 1 NC_008048.1 hypothetical protein 393380 4081967 Sala_0380 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615436.1 393186 R 317655 CDS YP_615437.1 103485876 4081968 393767..394336 1 NC_008048.1 integrase catalytic subunit 394336 4081968 Sala_0381 Sphingopyxis alaskensis RB2256 integrase catalytic subunit YP_615437.1 393767 D 317655 CDS YP_615438.1 103485877 4081969 394545..395678 1 NC_008048.1 peptidase S1 and S6, chymotrypsin/Hap 395678 4081969 Sala_0382 Sphingopyxis alaskensis RB2256 peptidase S1 and S6, chymotrypsin/Hap YP_615438.1 394545 D 317655 CDS YP_615439.1 103485878 4081970 complement(395730..396230) 1 NC_008048.1 heat shock protein Hsp20 396230 4081970 Sala_0383 Sphingopyxis alaskensis RB2256 heat shock protein Hsp20 YP_615439.1 395730 R 317655 CDS YP_615440.1 103485879 4081971 complement(396334..396843) 1 NC_008048.1 heat shock protein Hsp20 396843 4081971 Sala_0384 Sphingopyxis alaskensis RB2256 heat shock protein Hsp20 YP_615440.1 396334 R 317655 CDS YP_615441.1 103485880 4081972 397236..398333 1 NC_008048.1 hypothetical protein 398333 4081972 Sala_0385 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615441.1 397236 D 317655 CDS YP_615442.1 103485881 4081973 398363..399766 1 NC_008048.1 phospholipase D/transphosphatidylase 399766 4081973 Sala_0386 Sphingopyxis alaskensis RB2256 phospholipase D/transphosphatidylase YP_615442.1 398363 D 317655 CDS YP_615443.1 103485882 4081974 399785..401482 1 NC_008048.1 sodium/hydrogen exchanger 401482 4081974 Sala_0387 Sphingopyxis alaskensis RB2256 sodium/hydrogen exchanger YP_615443.1 399785 D 317655 CDS YP_615444.1 103485883 4081975 complement(401535..402176) 1 NC_008048.1 hypothetical protein 402176 4081975 Sala_0388 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615444.1 401535 R 317655 CDS YP_615445.1 103485884 4081976 complement(402315..402815) 1 NC_008048.1 heat shock protein Hsp20 402815 4081976 Sala_0389 Sphingopyxis alaskensis RB2256 heat shock protein Hsp20 YP_615445.1 402315 R 317655 CDS YP_615446.1 103485885 4081977 complement(402828..403220) 1 NC_008048.1 heat shock protein Hsp20 403220 4081977 Sala_0390 Sphingopyxis alaskensis RB2256 heat shock protein Hsp20 YP_615446.1 402828 R 317655 CDS YP_615447.1 103485886 4081711 complement(403230..403655) 1 NC_008048.1 heat shock protein Hsp20 403655 4081711 Sala_0391 Sphingopyxis alaskensis RB2256 heat shock protein Hsp20 YP_615447.1 403230 R 317655 CDS YP_615448.1 103485887 4081712 404253..404468 1 NC_008048.1 transposase (class IV) 404468 4081712 Sala_0393 Sphingopyxis alaskensis RB2256 transposase (class IV) YP_615448.1 404253 D 317655 CDS YP_615449.1 103485888 4081713 404489..405199 1 NC_008048.1 cyclic nucleotide-binding protein 405199 4081713 Sala_0394 Sphingopyxis alaskensis RB2256 cyclic nucleotide-binding protein YP_615449.1 404489 D 317655 CDS YP_615450.1 103485889 4081714 405475..405960 1 NC_008048.1 Ferritin and Dps 405960 4081714 Sala_0395 Sphingopyxis alaskensis RB2256 Ferritin and Dps YP_615450.1 405475 D 317655 CDS YP_615451.1 103485890 4081715 406261..407373 1 NC_008048.1 transposase IS116/IS110/IS902 407373 4081715 Sala_0396 Sphingopyxis alaskensis RB2256 transposase IS116/IS110/IS902 YP_615451.1 406261 D 317655 CDS YP_615452.1 103485891 4081716 407422..407781 1 NC_008048.1 transposase IS3/IS911 407781 4081716 Sala_0397 Sphingopyxis alaskensis RB2256 transposase IS3/IS911 YP_615452.1 407422 D 317655 CDS YP_615453.1 103485892 4081717 407787..408224 1 NC_008048.1 IS66 Orf2 like 408224 4081717 Sala_0398 Sphingopyxis alaskensis RB2256 IS66 Orf2 like YP_615453.1 407787 D 317655 CDS YP_615454.1 103485893 4081718 408303..409688 1 NC_008048.1 transposase IS66 409688 4081718 Sala_0399 Sphingopyxis alaskensis RB2256 transposase IS66 YP_615454.1 408303 D 317655 CDS YP_615455.1 103485894 4081719 409685..409858 1 NC_008048.1 transposase and inactivated derivative 409858 4081719 Sala_0400 Sphingopyxis alaskensis RB2256 transposase and inactivated derivative YP_615455.1 409685 D 317655 CDS YP_615456.1 103485895 4081720 complement(410461..410997) 1 NC_008048.1 GrpE protein HSP-70 cofactor 410997 4081720 Sala_0401 Sphingopyxis alaskensis RB2256 GrpE protein HSP-70 cofactor YP_615456.1 410461 R 317655 CDS YP_615457.1 103485896 4081721 complement(411015..412946) 1 NC_008048.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 412946 dnaK 4081721 dnaK Sphingopyxis alaskensis RB2256 molecular chaperone DnaK YP_615457.1 411015 R 317655 CDS YP_615458.1 103485897 4081722 complement(413007..413822) 1 NC_008048.1 histidine kinase 413822 4081722 Sala_0403 Sphingopyxis alaskensis RB2256 histidine kinase YP_615458.1 413007 R 317655 CDS YP_615459.1 103485898 4081723 complement(413875..414807) 1 NC_008048.1 heat shock protein DnaJ-like protein 414807 4081723 Sala_0404 Sphingopyxis alaskensis RB2256 heat shock protein DnaJ-like protein YP_615459.1 413875 R 317655 CDS YP_615460.1 103485899 4081724 complement(414851..415291) 1 NC_008048.1 thioredoxin 415291 4081724 Sala_0405 Sphingopyxis alaskensis RB2256 thioredoxin YP_615460.1 414851 R 317655 CDS YP_615461.1 103485900 4081725 complement(415330..417918) 1 NC_008048.1 ATPase 417918 4081725 Sala_0406 Sphingopyxis alaskensis RB2256 ATPase YP_615461.1 415330 R 317655 CDS YP_615462.1 103485901 4081726 complement(418042..418392) 1 NC_008048.1 transposase, IS4 418392 4081726 Sala_0407 Sphingopyxis alaskensis RB2256 transposase, IS4 YP_615462.1 418042 R 317655 CDS YP_615463.1 103485902 4081727 418721..419134 1 NC_008048.1 hypothetical protein 419134 4081727 Sala_0408 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615463.1 418721 D 317655 CDS YP_615464.1 103485903 4081728 419189..420106 1 NC_008048.1 hypothetical protein 420106 4081728 Sala_0409 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615464.1 419189 D 317655 CDS YP_615465.1 103485904 4081729 420204..420824 1 NC_008048.1 hypothetical protein 420824 4081729 Sala_0410 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615465.1 420204 D 317655 CDS YP_615466.1 103485905 4081730 420935..421555 1 NC_008048.1 hypothetical protein 421555 4081730 Sala_0411 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615466.1 420935 D 317655 CDS YP_615467.1 103485906 4082364 421590..422132 1 NC_008048.1 hypothetical protein 422132 4082364 Sala_0412 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615467.1 421590 D 317655 CDS YP_615468.1 103485907 4082366 423120..423605 1 NC_008048.1 hypothetical protein 423605 4082366 Sala_0414 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615468.1 423120 D 317655 CDS YP_615469.1 103485908 4082367 complement(423702..423857) 1 NC_008048.1 chaperonin GroEL 423857 4082367 Sala_0415 Sphingopyxis alaskensis RB2256 chaperonin GroEL YP_615469.1 423702 R 317655 CDS YP_615470.1 103485909 4082368 424080..424355 1 NC_008048.1 transposase IS3/IS911 424355 4082368 Sala_0416 Sphingopyxis alaskensis RB2256 transposase IS3/IS911 YP_615470.1 424080 D 317655 CDS YP_615471.1 103485910 4082369 424434..425963 1 NC_008048.1 integrase catalytic subunit 425963 4082369 Sala_0417 Sphingopyxis alaskensis RB2256 integrase catalytic subunit YP_615471.1 424434 D 317655 CDS YP_615472.1 103485911 4082370 425953..426720 1 NC_008048.1 IstB-like ATP-binding protein 426720 4082370 Sala_0418 Sphingopyxis alaskensis RB2256 IstB-like ATP-binding protein YP_615472.1 425953 D 317655 CDS YP_615473.1 103485912 4082371 complement(426817..427104) 1 NC_008048.1 hypothetical protein 427104 4082371 Sala_0419 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615473.1 426817 R 317655 CDS YP_615474.1 103485913 4082372 complement(427812..428060) 1 NC_008048.1 hypothetical protein 428060 4082372 Sala_0420 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615474.1 427812 R 317655 CDS YP_615475.1 103485914 4082373 428472..428840 1 NC_008048.1 hypothetical protein 428840 4082373 Sala_0421 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615475.1 428472 D 317655 CDS YP_615476.1 103485915 4082374 complement(428957..429379) 1 NC_008048.1 single-strand binding protein 429379 4082374 Sala_0422 Sphingopyxis alaskensis RB2256 single-strand binding protein YP_615476.1 428957 R 317655 CDS YP_615477.1 103485916 4082375 complement(429651..430079) 1 NC_008048.1 hypothetical protein 430079 4082375 Sala_0423 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615477.1 429651 R 317655 CDS YP_615478.1 103485917 4082376 complement(430090..430551) 1 NC_008048.1 hypothetical protein 430551 4082376 Sala_0424 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615478.1 430090 R 317655 CDS YP_615479.1 103485918 4082377 complement(430674..431627) 1 NC_008048.1 hypothetical protein 431627 4082377 Sala_0425 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615479.1 430674 R 317655 CDS YP_615480.1 103485919 4082378 complement(431930..432352) 1 NC_008048.1 hypothetical protein 432352 4082378 Sala_0426 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615480.1 431930 R 317655 CDS YP_615481.1 103485920 4082379 complement(432364..433305) 1 NC_008048.1 antirestriction protein 433305 4082379 Sala_0427 Sphingopyxis alaskensis RB2256 antirestriction protein YP_615481.1 432364 R 317655 CDS YP_615482.1 103485921 4082380 complement(433473..435461) 1 NC_008048.1 parB-like partition proteins 435461 4082380 Sala_0428 Sphingopyxis alaskensis RB2256 parB-like partition proteins YP_615482.1 433473 R 317655 CDS YP_615483.1 103485922 4082381 435883..436536 1 NC_008048.1 hypothetical protein 436536 4082381 Sala_0429 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615483.1 435883 D 317655 CDS YP_615484.1 103485923 4082382 436533..438461 1 NC_008048.1 hypothetical protein 438461 4082382 Sala_0430 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615484.1 436533 D 317655 CDS YP_615485.1 103485924 4082978 438445..440391 1 NC_008048.1 hypothetical protein 440391 4082978 Sala_0431 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615485.1 438445 D 317655 CDS YP_615486.1 103485925 4082979 complement(440845..441573) 1 NC_008048.1 IstB-like ATP-binding protein 441573 4082979 Sala_0432 Sphingopyxis alaskensis RB2256 IstB-like ATP-binding protein YP_615486.1 440845 R 317655 CDS YP_615487.1 103485926 4082980 complement(441560..443074) 1 NC_008048.1 integrase catalytic subunit 443074 4082980 Sala_0433 Sphingopyxis alaskensis RB2256 integrase catalytic subunit YP_615487.1 441560 R 317655 CDS YP_615488.1 103485927 4082981 443253..443660 1 NC_008048.1 hypothetical protein 443660 4082981 Sala_0434 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615488.1 443253 D 317655 CDS YP_615489.1 103485928 4082982 complement(443726..444460) 1 NC_008048.1 hypothetical protein 444460 4082982 Sala_0435 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615489.1 443726 R 317655 CDS YP_615490.1 103485929 4082983 complement(444457..444870) 1 NC_008048.1 hypothetical protein 444870 4082983 Sala_0436 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615490.1 444457 R 317655 CDS YP_615491.1 103485930 4082984 complement(444934..446769) 1 NC_008048.1 putative methylase/helicase 446769 4082984 Sala_0437 Sphingopyxis alaskensis RB2256 putative methylase/helicase YP_615491.1 444934 R 317655 CDS YP_615492.1 103485931 4082985 446826..448373 1 NC_008048.1 phage integrase 448373 4082985 Sala_0438 Sphingopyxis alaskensis RB2256 phage integrase YP_615492.1 446826 D 317655 CDS YP_615493.1 103485932 4082986 448367..449281 1 NC_008048.1 phage integrase 449281 4082986 Sala_0439 Sphingopyxis alaskensis RB2256 phage integrase YP_615493.1 448367 D 317655 CDS YP_615494.1 103485933 4082987 449278..450282 1 NC_008048.1 phage integrase 450282 4082987 Sala_0440 Sphingopyxis alaskensis RB2256 phage integrase YP_615494.1 449278 D 317655 CDS YP_615495.1 103485934 4082988 complement(450421..452895) 1 NC_008048.1 putative methylase/helicase 452895 4082988 Sala_0441 Sphingopyxis alaskensis RB2256 putative methylase/helicase YP_615495.1 450421 R 317655 CDS YP_615496.1 103485935 4082989 complement(452936..453865) 1 NC_008048.1 virulence-associated protein E 453865 4082989 Sala_0442 Sphingopyxis alaskensis RB2256 virulence-associated protein E YP_615496.1 452936 R 317655 CDS YP_615497.1 103485936 4082990 453990..454646 1 NC_008048.1 lytic transglycosylase, catalytic 454646 4082990 Sala_0443 Sphingopyxis alaskensis RB2256 lytic transglycosylase, catalytic YP_615497.1 453990 D 317655 CDS YP_615498.1 103485937 4082991 complement(454701..455954) 1 NC_008048.1 phage integrase 455954 4082991 Sala_0444 Sphingopyxis alaskensis RB2256 phage integrase YP_615498.1 454701 R 317655 CDS YP_615499.1 103485938 4082993 complement(456270..456875) 1 NC_008048.1 hypothetical protein 456875 4082993 Sala_0445 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615499.1 456270 R 317655 CDS YP_615500.1 103485939 4082994 complement(456968..457726) 1 NC_008048.1 alpha/beta hydrolase 457726 4082994 Sala_0446 Sphingopyxis alaskensis RB2256 alpha/beta hydrolase YP_615500.1 456968 R 317655 CDS YP_615501.1 103485940 4082995 complement(457723..458871) 1 NC_008048.1 hypothetical protein 458871 4082995 Sala_0447 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615501.1 457723 R 317655 CDS YP_615502.1 103485941 4082996 complement(458901..459839) 1 NC_008048.1 aminodeoxychorismate lyase 459839 4082996 Sala_0448 Sphingopyxis alaskensis RB2256 aminodeoxychorismate lyase YP_615502.1 458901 R 317655 CDS YP_615503.1 103485942 4080938 459925..460227 1 NC_008048.1 hypothetical protein 460227 4080938 Sala_0449 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615503.1 459925 D 317655 CDS YP_615504.1 103485943 4080939 460587..462050 1 NC_008048.1 TonB-dependent receptor, plug 462050 4080939 Sala_0450 Sphingopyxis alaskensis RB2256 TonB-dependent receptor, plug YP_615504.1 460587 D 317655 CDS YP_615505.1 103485944 4080940 complement(462047..462814) 1 NC_008048.1 glutamine cyclotransferase 462814 4080940 Sala_0451 Sphingopyxis alaskensis RB2256 glutamine cyclotransferase YP_615505.1 462047 R 317655 CDS YP_615506.1 103485945 4080941 complement(463029..464672) 1 NC_008048.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is not essential for growth; chaperonin GroEL 464672 groEL 4080941 groEL Sphingopyxis alaskensis RB2256 chaperonin GroEL YP_615506.1 463029 R 317655 CDS YP_615507.1 103485946 4080942 complement(464759..465046) 1 NC_008048.1 chaperonin Cpn10 465046 4080942 Sala_0453 Sphingopyxis alaskensis RB2256 chaperonin Cpn10 YP_615507.1 464759 R 317655 CDS YP_615508.1 103485947 4080943 complement(465182..466615) 1 NC_008048.1 MATE efflux family protein 466615 4080943 Sala_0454 Sphingopyxis alaskensis RB2256 MATE efflux family protein YP_615508.1 465182 R 317655 CDS YP_615509.1 103485948 4080944 466957..467709 1 NC_008048.1 alpha/beta hydrolase 467709 4080944 Sala_0455 Sphingopyxis alaskensis RB2256 alpha/beta hydrolase YP_615509.1 466957 D 317655 CDS YP_615510.1 103485949 4080945 467931..469769 1 NC_008048.1 peptidyl-dipeptidase A 469769 4080945 Sala_0456 Sphingopyxis alaskensis RB2256 peptidyl-dipeptidase A YP_615510.1 467931 D 317655 CDS YP_615511.1 103485950 4080946 complement(470045..470326) 1 NC_008048.1 ArsR family transcriptional regulator 470326 4080946 Sala_0457 Sphingopyxis alaskensis RB2256 ArsR family transcriptional regulator YP_615511.1 470045 R 317655 CDS YP_615512.1 103485951 4080947 470427..470909 1 NC_008048.1 hypothetical protein 470909 4080947 Sala_0458 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615512.1 470427 D 317655 CDS YP_615513.1 103485952 4080948 471043..471864 1 NC_008048.1 hypothetical protein 471864 4080948 Sala_0459 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615513.1 471043 D 317655 CDS YP_615514.1 103485953 4080949 complement(471874..472134) 1 NC_008048.1 hypothetical protein 472134 4080949 Sala_0460 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615514.1 471874 R 317655 CDS YP_615515.1 103485954 4080950 472246..473724 1 NC_008048.1 ATPase 473724 4080950 Sala_0461 Sphingopyxis alaskensis RB2256 ATPase YP_615515.1 472246 D 317655 CDS YP_615516.1 103485955 4080951 complement(473876..474244) 1 NC_008048.1 type IV pilus assembly PilZ 474244 4080951 Sala_0462 Sphingopyxis alaskensis RB2256 type IV pilus assembly PilZ YP_615516.1 473876 R 317655 CDS YP_615517.1 103485956 4080952 474351..475952 1 NC_008048.1 class I; LysRS1; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri this enzyme charges both tRNA molecules for lysine that exist in this organism (but the tRNALysUUU very poorly) and in the presence of LysRS2 can charge tRNAPyl with lysine; lysyl-tRNA synthetase 475952 lysK 4080952 lysK Sphingopyxis alaskensis RB2256 lysyl-tRNA synthetase YP_615517.1 474351 D 317655 CDS YP_615518.1 103485957 4080953 475999..476481 1 NC_008048.1 asparaginase 476481 4080953 Sala_0464 Sphingopyxis alaskensis RB2256 asparaginase YP_615518.1 475999 D 317655 CDS YP_615519.1 103485958 4080954 complement(476482..477513) 1 NC_008048.1 fatty acid desaturase 477513 4080954 Sala_0465 Sphingopyxis alaskensis RB2256 fatty acid desaturase YP_615519.1 476482 R 317655 CDS YP_615520.1 103485959 4080955 477662..480298 1 NC_008048.1 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 480298 4080955 Sala_0466 Sphingopyxis alaskensis RB2256 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_615520.1 477662 D 317655 CDS YP_615521.1 103485960 4080956 480514..481503 1 NC_008048.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 481503 4080956 Sala_0467 Sphingopyxis alaskensis RB2256 quinolinate synthetase YP_615521.1 480514 D 317655 CDS YP_615522.1 103485961 4080516 complement(481594..481986) 1 NC_008048.1 hypothetical protein 481986 4080516 Sala_0468 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615522.1 481594 R 317655 CDS YP_615523.1 103485962 4080517 482465..482731 1 NC_008048.1 transglycosylase-associated protein 482731 4080517 Sala_0469 Sphingopyxis alaskensis RB2256 transglycosylase-associated protein YP_615523.1 482465 D 317655 CDS YP_615524.1 103485963 4080518 482855..483127 1 NC_008048.1 transglycosylase-associated protein 483127 4080518 Sala_0470 Sphingopyxis alaskensis RB2256 transglycosylase-associated protein YP_615524.1 482855 D 317655 CDS YP_615525.1 103485964 4080519 483394..484608 1 NC_008048.1 secretion protein HlyD 484608 4080519 Sala_0471 Sphingopyxis alaskensis RB2256 secretion protein HlyD YP_615525.1 483394 D 317655 CDS YP_615526.1 103485965 4080520 484650..488066 1 NC_008048.1 acriflavin resistance protein 488066 4080520 Sala_0472 Sphingopyxis alaskensis RB2256 acriflavin resistance protein YP_615526.1 484650 D 317655 CDS YP_615527.1 103485966 4080521 488139..489404 1 NC_008048.1 hypothetical protein 489404 4080521 Sala_0473 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615527.1 488139 D 317655 CDS YP_615528.1 103485967 4080522 complement(489401..490189) 1 NC_008048.1 NAD-dependent epimerase/dehydratase 490189 4080522 Sala_0474 Sphingopyxis alaskensis RB2256 NAD-dependent epimerase/dehydratase YP_615528.1 489401 R 317655 CDS YP_615529.1 103485968 4080523 490236..492830 1 NC_008048.1 aminopeptidase N 492830 pepN 4080523 pepN Sphingopyxis alaskensis RB2256 aminopeptidase N YP_615529.1 490236 D 317655 CDS YP_615530.1 103485969 4080524 complement(492990..493310) 1 NC_008048.1 small multidrug resistance protein 493310 4080524 Sala_0476 Sphingopyxis alaskensis RB2256 small multidrug resistance protein YP_615530.1 492990 R 317655 CDS YP_615531.1 103485970 4080525 complement(493422..494192) 1 NC_008048.1 twin-arginine translocation pathway signal 494192 4080525 Sala_0477 Sphingopyxis alaskensis RB2256 twin-arginine translocation pathway signal YP_615531.1 493422 R 317655 CDS YP_615532.1 103485971 4080526 complement(494439..495038) 1 NC_008048.1 hypothetical protein 495038 4080526 Sala_0478 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615532.1 494439 R 317655 CDS YP_615533.1 103485972 4080527 complement(495047..495988) 1 NC_008048.1 hypothetical protein 495988 4080527 Sala_0479 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615533.1 495047 R 317655 CDS YP_615534.1 103485973 4080528 complement(495988..496866) 1 NC_008048.1 ABC transporter 496866 4080528 Sala_0480 Sphingopyxis alaskensis RB2256 ABC transporter YP_615534.1 495988 R 317655 CDS YP_615535.1 103485974 4080529 complement(496866..497972) 1 NC_008048.1 hypothetical protein 497972 4080529 Sala_0481 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615535.1 496866 R 317655 CDS YP_615536.1 103485975 4080530 498075..498794 1 NC_008048.1 HAD family hydrolase 498794 4080530 Sala_0482 Sphingopyxis alaskensis RB2256 HAD family hydrolase YP_615536.1 498075 D 317655 CDS YP_615537.1 103485976 4080531 complement(499052..500344) 1 NC_008048.1 catalyzes the formation of methanethiol and 2-ocobutanoate from L-methionine; methionine gamma-lyase 500344 4080531 Sala_0483 Sphingopyxis alaskensis RB2256 methionine gamma-lyase YP_615537.1 499052 R 317655 CDS YP_615538.1 103485977 4080532 complement(500415..501821) 1 NC_008048.1 anion transporter 501821 4080532 Sala_0484 Sphingopyxis alaskensis RB2256 anion transporter YP_615538.1 500415 R 317655 CDS YP_615539.1 103485978 4080533 complement(501941..502702) 1 NC_008048.1 hypothetical protein 502702 4080533 Sala_0485 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615539.1 501941 R 317655 CDS YP_615540.1 103485979 4080534 complement(502699..503217) 1 NC_008048.1 N-acetyltransferase GCN5 503217 4080534 Sala_0486 Sphingopyxis alaskensis RB2256 N-acetyltransferase GCN5 YP_615540.1 502699 R 317655 CDS YP_615541.1 103485980 4080535 complement(503214..504284) 1 NC_008048.1 hypothetical protein 504284 4080535 Sala_0487 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615541.1 503214 R 317655 CDS YP_615542.1 103485981 4081378 complement(504271..505146) 1 NC_008048.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 505146 4081378 Sala_0488 Sphingopyxis alaskensis RB2256 prolipoprotein diacylglyceryl transferase YP_615542.1 504271 R 317655 CDS YP_615543.1 103485982 4081379 505224..506933 1 NC_008048.1 AMP-dependent synthetase and ligase 506933 4081379 Sala_0489 Sphingopyxis alaskensis RB2256 AMP-dependent synthetase and ligase YP_615543.1 505224 D 317655 CDS YP_615544.1 103485983 4081380 506982..507839 1 NC_008048.1 hypothetical protein 507839 4081380 Sala_0490 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615544.1 506982 D 317655 CDS YP_615545.1 103485984 4081381 507836..508606 1 NC_008048.1 oxidoreductase, molybdopterin binding 508606 4081381 Sala_0491 Sphingopyxis alaskensis RB2256 oxidoreductase, molybdopterin binding YP_615545.1 507836 D 317655 CDS YP_615546.1 103485985 4081382 508634..509920 1 NC_008048.1 cyclopropane-fatty-acyl-phospholipid synthase 509920 4081382 Sala_0492 Sphingopyxis alaskensis RB2256 cyclopropane-fatty-acyl-phospholipid synthase YP_615546.1 508634 D 317655 CDS YP_615547.1 103485986 4081383 complement(509925..510362) 1 NC_008048.1 hypothetical protein 510362 4081383 Sala_0493 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615547.1 509925 R 317655 CDS YP_615548.1 103485987 4081384 complement(510391..512457) 1 NC_008048.1 hypothetical protein 512457 4081384 Sala_0494 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615548.1 510391 R 317655 CDS YP_615549.1 103485988 4081385 512621..513838 1 NC_008048.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 513838 4081385 Sala_0495 Sphingopyxis alaskensis RB2256 argininosuccinate synthase YP_615549.1 512621 D 317655 CDS YP_615550.1 103485989 4081386 513849..514859 1 NC_008048.1 threonine aldolase 514859 4081386 Sala_0496 Sphingopyxis alaskensis RB2256 threonine aldolase YP_615550.1 513849 D 317655 CDS YP_615551.1 103485990 4081387 514856..515815 1 NC_008048.1 hypothetical protein 515815 4081387 Sala_0497 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615551.1 514856 D 317655 CDS YP_615552.1 103485991 4081388 515862..517142 1 NC_008048.1 hypothetical protein 517142 4081388 Sala_0498 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615552.1 515862 D 317655 CDS YP_615553.1 103485992 4081389 complement(517129..518412) 1 NC_008048.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 518412 4081389 Sala_0499 Sphingopyxis alaskensis RB2256 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_615553.1 517129 R 317655 CDS YP_615554.1 103485993 4081390 complement(518704..519309) 1 NC_008048.1 DSBA oxidoreductase 519309 4081390 Sala_0500 Sphingopyxis alaskensis RB2256 DSBA oxidoreductase YP_615554.1 518704 R 317655 CDS YP_615555.1 103485994 4081391 complement(519303..520034) 1 NC_008048.1 short-chain dehydrogenase/reductase SDR 520034 4081391 Sala_0501 Sphingopyxis alaskensis RB2256 short-chain dehydrogenase/reductase SDR YP_615555.1 519303 R 317655 CDS YP_615556.1 103485995 4081392 520101..520604 1 NC_008048.1 HxlR family transcriptional regulator 520604 4081392 Sala_0502 Sphingopyxis alaskensis RB2256 HxlR family transcriptional regulator YP_615556.1 520101 D 317655 CDS YP_615557.1 103485996 4081393 complement(520607..520972) 1 NC_008048.1 ATP-dependent Clp protease adaptor protein ClpS 520972 4081393 Sala_0503 Sphingopyxis alaskensis RB2256 ATP-dependent Clp protease adaptor protein ClpS YP_615557.1 520607 R 317655 CDS YP_615558.1 103485997 4081394 complement(521166..521912) 1 NC_008048.1 phasin 521912 4081394 Sala_0504 Sphingopyxis alaskensis RB2256 phasin YP_615558.1 521166 R 317655 CDS YP_615559.1 103485998 4081395 complement(522038..523810) 1 NC_008048.1 Poly(R)-hydroxyalkanoic acid synthase, class I 523810 4081395 Sala_0505 Sphingopyxis alaskensis RB2256 Poly(R)-hydroxyalkanoic acid synthase, class I YP_615559.1 522038 R 317655 CDS YP_615560.1 103485999 4081396 523927..525147 1 NC_008048.1 aminotransferase 525147 4081396 Sala_0506 Sphingopyxis alaskensis RB2256 aminotransferase YP_615560.1 523927 D 317655 CDS YP_615561.1 103486000 4081397 525148..525630 1 NC_008048.1 hypothetical protein 525630 4081397 Sala_0507 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615561.1 525148 D 317655 CDS YP_615562.1 103486001 4081398 525790..527106 1 NC_008048.1 major facilitator superfamily transporter 527106 4081398 Sala_0508 Sphingopyxis alaskensis RB2256 major facilitator superfamily transporter YP_615562.1 525790 D 317655 CDS YP_615563.1 103486002 4081399 complement(527209..527799) 1 NC_008048.1 NADPH-dependent FMN reductase 527799 4081399 Sala_0509 Sphingopyxis alaskensis RB2256 NADPH-dependent FMN reductase YP_615563.1 527209 R 317655 CDS YP_615564.1 103486003 4081400 complement(527847..529136) 1 NC_008048.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 529136 4081400 Sala_0510 Sphingopyxis alaskensis RB2256 adenylosuccinate synthetase YP_615564.1 527847 R 317655 CDS YP_615565.1 103486004 4081401 529271..530215 1 NC_008048.1 LipQ 530215 4081401 Sala_0511 Sphingopyxis alaskensis RB2256 LipQ YP_615565.1 529271 D 317655 CDS YP_615566.1 103486005 4081402 complement(530372..531061) 1 NC_008048.1 glutathione S-transferase-like protein 531061 4081402 Sala_0512 Sphingopyxis alaskensis RB2256 glutathione S-transferase-like protein YP_615566.1 530372 R 317655 CDS YP_615567.1 103486006 4081403 complement(531064..531351) 1 NC_008048.1 chorismate mutase 531351 4081403 Sala_0513 Sphingopyxis alaskensis RB2256 chorismate mutase YP_615567.1 531064 R 317655 CDS YP_615568.1 103486007 4081404 531457..532470 1 NC_008048.1 trans-hexaprenyltranstransferase 532470 4081404 Sala_0514 Sphingopyxis alaskensis RB2256 trans-hexaprenyltranstransferase YP_615568.1 531457 D 317655 CDS YP_615569.1 103486008 4081405 532490..532867 1 NC_008048.1 hypothetical protein 532867 4081405 Sala_0515 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615569.1 532490 D 317655 CDS YP_615570.1 103486009 4081406 532864..535332 1 NC_008048.1 ATP-dependent helicase HrpB 535332 4081406 Sala_0516 Sphingopyxis alaskensis RB2256 ATP-dependent helicase HrpB YP_615570.1 532864 D 317655 CDS YP_615571.1 103486010 4081407 535398..535676 1 NC_008048.1 ETC complex I subunit region 535676 4081407 Sala_0517 Sphingopyxis alaskensis RB2256 ETC complex I subunit region YP_615571.1 535398 D 317655 CDS YP_615572.1 103486011 4081408 complement(535836..536051) 1 NC_008048.1 hypothetical protein 536051 4081408 Sala_0518 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615572.1 535836 R 317655 CDS YP_615573.1 103486012 4081409 complement(536131..536487) 1 NC_008048.1 hypothetical protein 536487 4081409 Sala_0519 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615573.1 536131 R 317655 CDS YP_615574.1 103486013 4081410 complement(536471..536854) 1 NC_008048.1 hypothetical protein 536854 4081410 Sala_0520 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615574.1 536471 R 317655 CDS YP_615575.1 103486014 4081411 complement(536854..537303) 1 NC_008048.1 hypothetical protein 537303 4081411 Sala_0521 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615575.1 536854 R 317655 CDS YP_615576.1 103486015 4081412 complement(537311..537901) 1 NC_008048.1 hypothetical protein 537901 4081412 Sala_0522 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615576.1 537311 R 317655 CDS YP_615577.1 103486016 4081413 538057..539331 1 NC_008048.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 539331 eno 4081413 eno Sphingopyxis alaskensis RB2256 phosphopyruvate hydratase YP_615577.1 538057 D 317655 CDS YP_615578.1 103486017 4081414 539401..539724 1 NC_008048.1 septum formation initiator 539724 4081414 Sala_0524 Sphingopyxis alaskensis RB2256 septum formation initiator YP_615578.1 539401 D 317655 CDS YP_615579.1 103486018 4081415 539985..541055 1 NC_008048.1 pyruvate dehydrogenase (lipoamide) 541055 4081415 Sala_0525 Sphingopyxis alaskensis RB2256 pyruvate dehydrogenase (lipoamide) YP_615579.1 539985 D 317655 CDS YP_615580.1 103486019 4081416 541057..542457 1 NC_008048.1 catalyzes the oxidative decarboxylation of pyruvate with concomitant acetylation of a lipoic acid-containing dihydrolipoamide acetyltransferase within the complex. The E1 component of the pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase(E2) and lipoamide dehydrogenase; pyruvate dehydrogenase subunit beta 542457 4081416 Sala_0526 Sphingopyxis alaskensis RB2256 pyruvate dehydrogenase subunit beta YP_615580.1 541057 D 317655 CDS YP_615581.1 103486020 4081417 542505..543173 1 NC_008048.1 hypothetical protein 543173 4081417 Sala_0527 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615581.1 542505 D 317655 CDS YP_615582.1 103486021 4081418 543258..543974 1 NC_008048.1 Serine O-acetyltransferase 543974 4081418 Sala_0528 Sphingopyxis alaskensis RB2256 Serine O-acetyltransferase YP_615582.1 543258 D 317655 CDS YP_615583.1 103486022 4081419 543974..544321 1 NC_008048.1 hypothetical protein 544321 4081419 Sala_0529 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615583.1 543974 D 317655 CDS YP_615584.1 103486023 4081420 complement(544299..545363) 1 NC_008048.1 hypothetical protein 545363 4081420 Sala_0530 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615584.1 544299 R 317655 CDS YP_615585.1 103486024 4081421 complement(545637..546539) 1 NC_008048.1 short-chain dehydrogenase/reductase SDR 546539 4081421 Sala_0531 Sphingopyxis alaskensis RB2256 short-chain dehydrogenase/reductase SDR YP_615585.1 545637 R 317655 CDS YP_615586.1 103486025 4081422 546739..548091 1 NC_008048.1 phosphate-selective porin O and P 548091 4081422 Sala_0532 Sphingopyxis alaskensis RB2256 phosphate-selective porin O and P YP_615586.1 546739 D 317655 CDS YP_615587.1 103486026 4081423 complement(548107..549528) 1 NC_008048.1 hypothetical protein 549528 4081423 Sala_0533 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615587.1 548107 R 317655 CDS YP_615588.1 103486027 4081424 complement(549935..550342) 1 NC_008048.1 hypothetical protein 550342 4081424 Sala_0534 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615588.1 549935 R 317655 CDS YP_615589.1 103486028 4081425 complement(550335..550820) 1 NC_008048.1 hypothetical protein 550820 4081425 Sala_0535 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615589.1 550335 R 317655 CDS YP_615590.1 103486029 4081426 550902..551333 1 NC_008048.1 BadM/Rrf2 family transcriptional regulator 551333 4081426 Sala_0536 Sphingopyxis alaskensis RB2256 BadM/Rrf2 family transcriptional regulator YP_615590.1 550902 D 317655 CDS YP_615591.1 103486030 4081427 complement(551353..552942) 1 NC_008048.1 AbgT transporter 552942 4081427 Sala_0537 Sphingopyxis alaskensis RB2256 AbgT transporter YP_615591.1 551353 R 317655 CDS YP_615592.1 103486031 4081428 553000..553593 1 NC_008048.1 catalyzes the formation of thymidine 5'-phosphate from thymidine; thymidine kinase 553593 4081428 Sala_0538 Sphingopyxis alaskensis RB2256 thymidine kinase YP_615592.1 553000 D 317655 CDS YP_615593.1 103486032 4081429 553586..554122 1 NC_008048.1 N-acetyltransferase GCN5 554122 4081429 Sala_0539 Sphingopyxis alaskensis RB2256 N-acetyltransferase GCN5 YP_615593.1 553586 D 317655 CDS YP_615594.1 103486033 4081430 554154..554615 1 NC_008048.1 hypothetical protein 554615 4081430 Sala_0540 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615594.1 554154 D 317655 CDS YP_615595.1 103486034 4081431 554649..555605 1 NC_008048.1 tRNA pseudouridine synthase B 555605 4081431 Sala_0541 Sphingopyxis alaskensis RB2256 tRNA pseudouridine synthase B YP_615595.1 554649 D 317655 CDS YP_615596.1 103486035 4081432 555631..555900 1 NC_008048.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 555900 rpsO 4081432 rpsO Sphingopyxis alaskensis RB2256 30S ribosomal protein S15 YP_615596.1 555631 D 317655 CDS YP_615597.1 103486036 4081433 556093..558408 1 NC_008048.1 polynucleotide phosphorylase/polyadenylase 558408 4081433 Sala_0543 Sphingopyxis alaskensis RB2256 polynucleotide phosphorylase/polyadenylase YP_615597.1 556093 D 317655 CDS YP_615598.1 103486037 4081434 558688..559392 1 NC_008048.1 cyclophilin type peptidyl-prolyl cis-trans isomerase 559392 4081434 Sala_0544 Sphingopyxis alaskensis RB2256 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_615598.1 558688 D 317655 CDS YP_615599.1 103486038 4081435 559479..560273 1 NC_008048.1 DNA uptake lipoprotein 560273 4081435 Sala_0545 Sphingopyxis alaskensis RB2256 DNA uptake lipoprotein YP_615599.1 559479 D 317655 CDS YP_615600.1 103486039 4081436 560306..561976 1 NC_008048.1 DNA repair protein RecN 561976 4081436 Sala_0546 Sphingopyxis alaskensis RB2256 DNA repair protein RecN YP_615600.1 560306 D 317655 CDS YP_615601.1 103486040 4081437 561973..562659 1 NC_008048.1 N-acetyltransferase GCN5 562659 4081437 Sala_0547 Sphingopyxis alaskensis RB2256 N-acetyltransferase GCN5 YP_615601.1 561973 D 317655 CDS YP_615602.1 103486041 4081438 562791..563105 1 NC_008048.1 hypothetical protein 563105 4081438 Sala_0548 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615602.1 562791 D 317655 CDS YP_615603.1 103486042 4081439 563107..565251 1 NC_008048.1 NAD-dependent DNA ligase 565251 4081439 Sala_0549 Sphingopyxis alaskensis RB2256 NAD-dependent DNA ligase YP_615603.1 563107 D 317655 CDS YP_615604.1 103486043 4081440 565595..566359 1 NC_008048.1 molybdenum ABC transporter periplasmic molybdate-binding protein 566359 4081440 Sala_0550 Sphingopyxis alaskensis RB2256 molybdenum ABC transporter periplasmic molybdate-binding protein YP_615604.1 565595 D 317655 CDS YP_615605.1 103486044 4081441 566359..567054 1 NC_008048.1 molybdate ABC transporter permease 567054 4081441 Sala_0551 Sphingopyxis alaskensis RB2256 molybdate ABC transporter permease YP_615605.1 566359 D 317655 CDS YP_615606.1 103486045 4081442 567044..567664 1 NC_008048.1 ABC transporter 567664 4081442 Sala_0552 Sphingopyxis alaskensis RB2256 ABC transporter YP_615606.1 567044 D 317655 CDS YP_615607.1 103486046 4081443 567703..568572 1 NC_008048.1 phenylalanine 4-hydroxylase; phenylalanine 4-hydroxylase; catalyzes the formation of 4a-hydroxytetrahydrobiopterin and tyrosine from phenylalanine and tetrahydrobiopterin; phenylalanine 4-monooxygenase 568572 phhA 4081443 phhA Sphingopyxis alaskensis RB2256 phenylalanine 4-monooxygenase YP_615607.1 567703 D 317655 CDS YP_615608.1 103486047 4081444 complement(568678..569649) 1 NC_008048.1 ribosomal L11 methyltransferase 569649 4081444 Sala_0554 Sphingopyxis alaskensis RB2256 ribosomal L11 methyltransferase YP_615608.1 568678 R 317655 CDS YP_615609.1 103486048 4081445 complement(569650..570342) 1 NC_008048.1 short-chain dehydrogenase/reductase SDR 570342 4081445 Sala_0555 Sphingopyxis alaskensis RB2256 short-chain dehydrogenase/reductase SDR YP_615609.1 569650 R 317655 CDS YP_615610.1 103486049 4081446 complement(570490..571842) 1 NC_008048.1 methyl-accepting chemotaxis sensory transducer 571842 4081446 Sala_0556 Sphingopyxis alaskensis RB2256 methyl-accepting chemotaxis sensory transducer YP_615610.1 570490 R 317655 CDS YP_615611.1 103486050 4081447 complement(571943..572410) 1 NC_008048.1 AsnC family transcriptional regulator 572410 4081447 Sala_0557 Sphingopyxis alaskensis RB2256 AsnC family transcriptional regulator YP_615611.1 571943 R 317655 CDS YP_615612.1 103486051 4081448 572566..573681 1 NC_008048.1 alanine dehydrogenase 573681 4081448 Sala_0558 Sphingopyxis alaskensis RB2256 alanine dehydrogenase YP_615612.1 572566 D 317655 CDS YP_615613.1 103486052 4081449 573703..573936 1 NC_008048.1 hypothetical protein 573936 4081449 Sala_0559 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615613.1 573703 D 317655 CDS YP_615614.1 103486053 4081450 complement(574015..574614) 1 NC_008048.1 ACP phosphodiesterase 574614 4081450 Sala_0560 Sphingopyxis alaskensis RB2256 ACP phosphodiesterase YP_615614.1 574015 R 317655 CDS YP_615615.1 103486054 4081451 complement(574726..575424) 1 NC_008048.1 Pirin-like protein 575424 4081451 Sala_0561 Sphingopyxis alaskensis RB2256 Pirin-like protein YP_615615.1 574726 R 317655 CDS YP_615616.1 103486055 4081452 575672..576607 1 NC_008048.1 LysR family transcriptional regulator 576607 4081452 Sala_0562 Sphingopyxis alaskensis RB2256 LysR family transcriptional regulator YP_615616.1 575672 D 317655 CDS YP_615617.1 103486056 4081453 576804..577511 1 NC_008048.1 two component transcriptional regulator 577511 4081453 Sala_0563 Sphingopyxis alaskensis RB2256 two component transcriptional regulator YP_615617.1 576804 D 317655 CDS YP_615618.1 103486057 4081454 complement(577905..578324) 1 NC_008048.1 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 578324 rplQ 4081454 rplQ Sphingopyxis alaskensis RB2256 50S ribosomal protein L17 YP_615618.1 577905 R 317655 CDS YP_615619.1 103486058 4081455 complement(578579..579637) 1 NC_008048.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 579637 4081455 Sala_0565 Sphingopyxis alaskensis RB2256 DNA-directed RNA polymerase subunit alpha YP_615619.1 578579 R 317655 CDS YP_615620.1 103486059 4081997 complement(579742..580131) 1 NC_008048.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 580131 4081997 Sala_0566 Sphingopyxis alaskensis RB2256 30S ribosomal protein S11 YP_615620.1 579742 R 317655 CDS YP_615621.1 103486060 4081998 complement(580209..580577) 1 NC_008048.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 580577 rpsM 4081998 rpsM Sphingopyxis alaskensis RB2256 30S ribosomal protein S13 YP_615621.1 580209 R 317655 CDS YP_615622.1 103486061 4081999 complement(580804..581595) 1 NC_008048.1 inositol monophosphatase 581595 4081999 Sala_0568 Sphingopyxis alaskensis RB2256 inositol monophosphatase YP_615622.1 580804 R 317655 CDS YP_615623.1 103486062 4082000 complement(581603..582946) 1 NC_008048.1 C69 family peptidase 582946 4082000 Sala_0569 Sphingopyxis alaskensis RB2256 C69 family peptidase YP_615623.1 581603 R 317655 CDS YP_615624.1 103486063 4082001 complement(582997..583395) 1 NC_008048.1 hypothetical protein 583395 4082001 Sala_0570 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615624.1 582997 R 317655 CDS YP_615625.1 103486064 4082002 complement(583613..584221) 1 NC_008048.1 hypothetical protein 584221 4082002 Sala_0571 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615625.1 583613 R 317655 CDS YP_615626.1 103486065 4082003 complement(584318..584833) 1 NC_008048.1 ubiquinone biosynthesis protein COQ7 584833 4082003 Sala_0572 Sphingopyxis alaskensis RB2256 ubiquinone biosynthesis protein COQ7 YP_615626.1 584318 R 317655 CDS YP_615627.1 103486066 4082004 complement(584830..585312) 1 NC_008048.1 disulfide bond formation protein 585312 4082004 Sala_0573 Sphingopyxis alaskensis RB2256 disulfide bond formation protein YP_615627.1 584830 R 317655 CDS YP_615628.1 103486067 4082005 complement(585400..586788) 1 NC_008048.1 carboxyl-terminal protease 586788 4082005 Sala_0574 Sphingopyxis alaskensis RB2256 carboxyl-terminal protease YP_615628.1 585400 R 317655 CDS YP_615629.1 103486068 4082006 complement(587033..588250) 1 NC_008048.1 peptidase M23B 588250 4082006 Sala_0575 Sphingopyxis alaskensis RB2256 peptidase M23B YP_615629.1 587033 R 317655 CDS YP_615630.1 103486069 4082007 complement(588247..588675) 1 NC_008048.1 hypothetical protein 588675 4082007 Sala_0576 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615630.1 588247 R 317655 CDS YP_615631.1 103486070 4082008 complement(588818..589216) 1 NC_008048.1 Iojap-related protein 589216 4082008 Sala_0577 Sphingopyxis alaskensis RB2256 Iojap-related protein YP_615631.1 588818 R 317655 CDS YP_615632.1 103486071 4082009 complement(589213..589866) 1 NC_008048.1 transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria; nicotinic acid mononucleotide adenylyltransferase 589866 nadD 4082009 nadD Sphingopyxis alaskensis RB2256 nicotinic acid mononucleotide adenylyltransferase YP_615632.1 589213 R 317655 CDS YP_615633.1 103486072 4082010 complement(589863..590150) 1 NC_008048.1 hypothetical protein 590150 4082010 Sala_0579 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615633.1 589863 R 317655 CDS YP_615634.1 103486073 4082011 complement(590147..590419) 1 NC_008048.1 CopG family transcriptional regulator 590419 4082011 Sala_0580 Sphingopyxis alaskensis RB2256 CopG family transcriptional regulator YP_615634.1 590147 R 317655 CDS YP_615635.1 103486074 4082012 complement(590451..591740) 1 NC_008048.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 591740 proA 4082012 proA Sphingopyxis alaskensis RB2256 gamma-glutamyl phosphate reductase YP_615635.1 590451 R 317655 CDS YP_615636.1 103486075 4082013 591820..592956 1 NC_008048.1 hypothetical protein 592956 4082013 Sala_0582 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615636.1 591820 D 317655 CDS YP_615637.1 103486076 4082014 complement(593134..594057) 1 NC_008048.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 594057 4082014 Sala_0583 Sphingopyxis alaskensis RB2256 enoyl-CoA hydratase YP_615637.1 593134 R 317655 CDS YP_615638.1 103486077 4082015 594302..595078 1 NC_008048.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazolesuccinocarboxamide synthase 595078 4082015 Sala_0584 Sphingopyxis alaskensis RB2256 phosphoribosylaminoimidazolesuccinocarboxamide synthase YP_615638.1 594302 D 317655 CDS YP_615639.1 103486078 4080612 595191..598082 1 NC_008048.1 peptidase M16-like protein 598082 4080612 Sala_0585 Sphingopyxis alaskensis RB2256 peptidase M16-like protein YP_615639.1 595191 D 317655 CDS YP_615640.1 103486079 4080613 598112..598471 1 NC_008048.1 hypothetical protein 598471 4080613 Sala_0586 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615640.1 598112 D 317655 CDS YP_615641.1 103486080 4080614 complement(598468..598887) 1 NC_008048.1 hypothetical protein 598887 4080614 Sala_0587 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615641.1 598468 R 317655 CDS YP_615642.1 103486081 4080615 complement(599209..599691) 1 NC_008048.1 bacterioferritin 599691 4080615 Sala_0588 Sphingopyxis alaskensis RB2256 bacterioferritin YP_615642.1 599209 R 317655 CDS YP_615643.1 103486082 4080616 599843..600091 1 NC_008048.1 hypothetical protein 600091 4080616 Sala_0589 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615643.1 599843 D 317655 CDS YP_615644.1 103486083 4080617 600146..600376 1 NC_008048.1 phosphoribosylformylglycinamidine synthase subunit PurS 600376 4080617 Sala_0590 Sphingopyxis alaskensis RB2256 phosphoribosylformylglycinamidine synthase subunit PurS YP_615644.1 600146 D 317655 CDS YP_615645.1 103486084 4080618 600414..601079 1 NC_008048.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase I 601079 4080618 Sala_0591 Sphingopyxis alaskensis RB2256 phosphoribosylformylglycinamidine synthase I YP_615645.1 600414 D 317655 CDS YP_615646.1 103486085 4080619 complement(601041..601412) 1 NC_008048.1 hypothetical protein 601412 4080619 Sala_0592 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615646.1 601041 R 317655 CDS YP_615647.1 103486086 4080620 complement(601416..602165) 1 NC_008048.1 hypothetical protein 602165 4080620 Sala_0593 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615647.1 601416 R 317655 CDS YP_615648.1 103486087 4080622 complement(602400..603122) 1 NC_008048.1 hypothetical protein 603122 4080622 Sala_0594 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615648.1 602400 R 317655 CDS YP_615649.1 103486088 4080623 603178..603777 1 NC_008048.1 TetR family transcriptional regulator 603777 4080623 Sala_0595 Sphingopyxis alaskensis RB2256 TetR family transcriptional regulator YP_615649.1 603178 D 317655 CDS YP_615650.1 103486089 4080624 complement(603804..605306) 1 NC_008048.1 major facilitator superfamily transporter 605306 4080624 Sala_0596 Sphingopyxis alaskensis RB2256 major facilitator superfamily transporter YP_615650.1 603804 R 317655 CDS YP_615651.1 103486090 4080625 complement(605507..606541) 1 NC_008048.1 LacI family transcriptional regulator 606541 4080625 Sala_0597 Sphingopyxis alaskensis RB2256 LacI family transcriptional regulator YP_615651.1 605507 R 317655 CDS YP_615652.1 103486091 4080626 complement(606733..607476) 1 NC_008048.1 hypothetical protein 607476 4080626 Sala_0598 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615652.1 606733 R 317655 CDS YP_615653.1 103486092 4080627 complement(607540..608892) 1 NC_008048.1 hypothetical protein 608892 4080627 Sala_0599 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615653.1 607540 R 317655 CDS YP_615654.1 103486093 4080628 complement(608902..610176) 1 NC_008048.1 Na+/H+ antiporter NhaA 610176 4080628 Sala_0600 Sphingopyxis alaskensis RB2256 Na+/H+ antiporter NhaA YP_615654.1 608902 R 317655 CDS YP_615655.1 103486094 4080629 610286..611737 1 NC_008048.1 bacteriophage N4 adsorption protein B 611737 4080629 Sala_0601 Sphingopyxis alaskensis RB2256 bacteriophage N4 adsorption protein B YP_615655.1 610286 D 317655 CDS YP_615656.1 103486095 4080630 612046..612852 1 NC_008048.1 hypothetical protein 612852 4080630 Sala_0602 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615656.1 612046 D 317655 CDS YP_615657.1 103486096 4082539 612922..613869 1 NC_008048.1 hypothetical protein 613869 4082539 Sala_0603 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615657.1 612922 D 317655 CDS YP_615658.1 103486097 4082540 613866..614639 1 NC_008048.1 hypothetical protein 614639 4082540 Sala_0604 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615658.1 613866 D 317655 CDS YP_615659.1 103486098 4082541 614727..616436 1 NC_008048.1 hypothetical protein 616436 4082541 Sala_0605 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615659.1 614727 D 317655 CDS YP_615660.1 103486099 4082542 complement(616832..617224) 1 NC_008048.1 glyoxalase family protein 617224 4082542 Sala_0606 Sphingopyxis alaskensis RB2256 glyoxalase family protein YP_615660.1 616832 R 317655 CDS YP_615661.1 103486100 4082543 complement(617263..618393) 1 NC_008048.1 cell wall hydrolase SleB 618393 4082543 Sala_0607 Sphingopyxis alaskensis RB2256 cell wall hydrolase SleB YP_615661.1 617263 R 317655 CDS YP_615662.1 103486101 4082544 complement(618574..619089) 1 NC_008048.1 hypothetical protein 619089 4082544 Sala_0608 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615662.1 618574 R 317655 CDS YP_615663.1 103486102 4082545 619301..619846 1 NC_008048.1 hypothetical protein 619846 4082545 Sala_0609 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615663.1 619301 D 317655 CDS YP_615664.1 103486103 4082546 619846..621492 1 NC_008048.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 621492 nusA 4082546 nusA Sphingopyxis alaskensis RB2256 transcription elongation factor NusA YP_615664.1 619846 D 317655 CDS YP_615665.1 103486104 4082547 621473..622231 1 NC_008048.1 hypothetical protein 622231 4082547 Sala_0611 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615665.1 621473 D 317655 CDS YP_615666.1 103486105 4082548 622249..624786 1 NC_008048.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 624786 infB 4082548 infB Sphingopyxis alaskensis RB2256 translation initiation factor IF-2 YP_615666.1 622249 D 317655 CDS YP_615667.1 103486106 4082549 624839..625249 1 NC_008048.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 625249 rbfA 4082549 rbfA Sphingopyxis alaskensis RB2256 ribosome-binding factor A YP_615667.1 624839 D 317655 CDS YP_615668.1 103486107 4082550 625278..625709 1 NC_008048.1 aromatic ring-cleaving dioxygenase-like protein 625709 4082550 Sala_0614 Sphingopyxis alaskensis RB2256 aromatic ring-cleaving dioxygenase-like protein YP_615668.1 625278 D 317655 CDS YP_615669.1 103486108 4082551 complement(625673..626785) 1 NC_008048.1 tRNA synthetase 626785 4082551 Sala_0615 Sphingopyxis alaskensis RB2256 tRNA synthetase YP_615669.1 625673 R 317655 CDS YP_615670.1 103486109 4082552 complement(626996..628582) 1 NC_008048.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 628582 4082552 Sala_0616 Sphingopyxis alaskensis RB2256 D-3-phosphoglycerate dehydrogenase YP_615670.1 626996 R 317655 CDS YP_615671.1 103486110 4082553 complement(628726..629856) 1 NC_008048.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; phosphoserine aminotransferase 629856 4082553 Sala_0617 Sphingopyxis alaskensis RB2256 phosphoserine aminotransferase YP_615671.1 628726 R 317655 CDS YP_615672.1 103486111 4082554 630026..630727 1 NC_008048.1 extensin-like protein 630727 4082554 Sala_0618 Sphingopyxis alaskensis RB2256 extensin-like protein YP_615672.1 630026 D 317655 CDS YP_615673.1 103486112 4082555 630889..631764 1 NC_008048.1 hypothetical protein 631764 4082555 Sala_0619 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615673.1 630889 D 317655 CDS YP_615674.1 103486113 4082556 complement(631946..632389) 1 NC_008048.1 cytochrome c, class I 632389 4082556 Sala_0620 Sphingopyxis alaskensis RB2256 cytochrome c, class I YP_615674.1 631946 R 317655 CDS YP_615675.1 103486114 4082557 complement(632389..633027) 1 NC_008048.1 cytochrome c, class I 633027 4082557 Sala_0621 Sphingopyxis alaskensis RB2256 cytochrome c, class I YP_615675.1 632389 R 317655 CDS YP_615676.1 103486115 4082558 633209..634102 1 NC_008048.1 catalyzes the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis; prephenate dehydratase 634102 4082558 Sala_0622 Sphingopyxis alaskensis RB2256 prephenate dehydratase YP_615676.1 633209 D 317655 CDS YP_615677.1 103486116 4082559 complement(634108..634782) 1 NC_008048.1 CDP-alcohol phosphatidyltransferase 634782 4082559 Sala_0623 Sphingopyxis alaskensis RB2256 CDP-alcohol phosphatidyltransferase YP_615677.1 634108 R 317655 CDS YP_615678.1 103486117 4082560 complement(634902..635393) 1 NC_008048.1 hypothetical protein 635393 4082560 Sala_0624 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615678.1 634902 R 317655 CDS YP_615679.1 103486118 4082561 complement(635390..638203) 1 NC_008048.1 DNA polymerase I 638203 4082561 Sala_0625 Sphingopyxis alaskensis RB2256 DNA polymerase I YP_615679.1 635390 R 317655 CDS YP_615680.1 103486119 4082562 complement(638262..638720) 1 NC_008048.1 gentamicin 3'-N-acetyltransferase 638720 4082562 Sala_0626 Sphingopyxis alaskensis RB2256 gentamicin 3'-N-acetyltransferase YP_615680.1 638262 R 317655 CDS YP_615681.1 103486120 4082563 complement(638827..639090) 1 NC_008048.1 hypothetical protein 639090 4082563 Sala_0627 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615681.1 638827 R 317655 CDS YP_615682.1 103486121 4082564 639242..639535 1 NC_008048.1 hypothetical protein 639535 4082564 Sala_0628 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615682.1 639242 D 317655 CDS YP_615683.1 103486122 4082565 639690..640253 1 NC_008048.1 alkyl hydroperoxide reductase 640253 4082565 Sala_0629 Sphingopyxis alaskensis RB2256 alkyl hydroperoxide reductase YP_615683.1 639690 D 317655 CDS YP_615684.1 103486123 4082566 640393..641955 1 NC_008048.1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 641955 4082566 Sala_0630 Sphingopyxis alaskensis RB2256 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_615684.1 640393 D 317655 CDS YP_615685.1 103486124 4082567 complement(641971..642459) 1 NC_008048.1 glutathione-dependent formaldehyde-activating protein 642459 4082567 Sala_0631 Sphingopyxis alaskensis RB2256 glutathione-dependent formaldehyde-activating protein YP_615685.1 641971 R 317655 CDS YP_615686.1 103486125 4082568 complement(642513..643217) 1 NC_008048.1 glutathione S-transferase-like protein 643217 4082568 Sala_0632 Sphingopyxis alaskensis RB2256 glutathione S-transferase-like protein YP_615686.1 642513 R 317655 CDS YP_615687.1 103486126 4082569 643328..643672 1 NC_008048.1 HxlR family transcriptional regulator 643672 4082569 Sala_0633 Sphingopyxis alaskensis RB2256 HxlR family transcriptional regulator YP_615687.1 643328 D 317655 CDS YP_615688.1 103486127 4082570 complement(643677..645290) 1 NC_008048.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 645290 guaA 4082570 guaA Sphingopyxis alaskensis RB2256 GMP synthase YP_615688.1 643677 R 317655 CDS YP_615689.1 103486128 4082571 645456..647861 1 NC_008048.1 TonB-dependent receptor 647861 4082571 Sala_0635 Sphingopyxis alaskensis RB2256 TonB-dependent receptor YP_615689.1 645456 D 317655 CDS YP_615690.1 103486129 4082572 complement(647858..648910) 1 NC_008048.1 group 1 glycosyl transferase 648910 4082572 Sala_0636 Sphingopyxis alaskensis RB2256 group 1 glycosyl transferase YP_615690.1 647858 R 317655 CDS YP_615691.1 103486130 4082573 complement(648907..649779) 1 NC_008048.1 metallophosphoesterase 649779 4082573 Sala_0637 Sphingopyxis alaskensis RB2256 metallophosphoesterase YP_615691.1 648907 R 317655 CDS YP_615692.1 103486131 4082574 complement(649954..651387) 1 NC_008048.1 aldehyde dehydrogenase 651387 4082574 Sala_0638 Sphingopyxis alaskensis RB2256 aldehyde dehydrogenase YP_615692.1 649954 R 317655 CDS YP_615693.1 103486132 4082575 complement(651499..653145) 1 NC_008048.1 catalyzes the condensation of two pyruvates to form acetolactate, implicated in pH homeostasis via the acetoin-2,3-butanediol pathway or in valine biosynthesis; acetolactate synthase 653145 4082575 Sala_0639 Sphingopyxis alaskensis RB2256 acetolactate synthase YP_615693.1 651499 R 317655 CDS YP_615694.1 103486133 4082576 complement(653681..654184) 1 NC_008048.1 hypothetical protein 654184 4082576 Sala_0640 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615694.1 653681 R 317655 CDS YP_615695.1 103486134 4082577 complement(654193..654492) 1 NC_008048.1 hypothetical protein 654492 4082577 Sala_0641 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615695.1 654193 R 317655 CDS YP_615696.1 103486135 4082732 complement(654582..656405) 1 NC_008048.1 cobalt chelatase subunit CobT 656405 4082732 Sala_0642 Sphingopyxis alaskensis RB2256 cobalt chelatase subunit CobT YP_615696.1 654582 R 317655 CDS YP_615697.1 103486136 4082733 complement(656711..657910) 1 NC_008048.1 hypothetical protein 657910 4082733 Sala_0643 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615697.1 656711 R 317655 CDS YP_615698.1 103486137 4082734 complement(657907..658896) 1 NC_008048.1 cobalt chelatase small subunit 658896 4082734 Sala_0644 Sphingopyxis alaskensis RB2256 cobalt chelatase small subunit YP_615698.1 657907 R 317655 CDS YP_615699.1 103486138 4082735 complement(659153..659590) 1 NC_008048.1 hypothetical protein 659590 4082735 Sala_0645 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615699.1 659153 R 317655 CDS YP_615700.1 103486139 4082736 complement(659601..660131) 1 NC_008048.1 heat shock protein DnaJ-like protein 660131 4082736 Sala_0646 Sphingopyxis alaskensis RB2256 heat shock protein DnaJ-like protein YP_615700.1 659601 R 317655 CDS YP_615701.1 103486140 4082737 660260..660550 1 NC_008048.1 BolA-like protein 660550 4082737 Sala_0647 Sphingopyxis alaskensis RB2256 BolA-like protein YP_615701.1 660260 D 317655 CDS YP_615702.1 103486141 4082738 660559..660927 1 NC_008048.1 hypothetical protein 660927 4082738 Sala_0648 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615702.1 660559 D 317655 CDS YP_615703.1 103486142 4082739 660947..661831 1 NC_008048.1 Pirin-like protein 661831 4082739 Sala_0649 Sphingopyxis alaskensis RB2256 Pirin-like protein YP_615703.1 660947 D 317655 CDS YP_615704.1 103486143 4082740 662045..662968 1 NC_008048.1 alpha/beta hydrolase 662968 4082740 Sala_0650 Sphingopyxis alaskensis RB2256 alpha/beta hydrolase YP_615704.1 662045 D 317655 CDS YP_615705.1 103486144 4082741 complement(663054..663476) 1 NC_008048.1 hypothetical protein 663476 4082741 Sala_0651 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615705.1 663054 R 317655 CDS YP_615706.1 103486145 4082742 663481..664632 1 NC_008048.1 beta-lactamase 664632 4082742 Sala_0652 Sphingopyxis alaskensis RB2256 beta-lactamase YP_615706.1 663481 D 317655 CDS YP_615707.1 103486146 4082743 complement(664627..665448) 1 NC_008048.1 phenazine biosynthesis PhzC/PhzF protein 665448 4082743 Sala_0653 Sphingopyxis alaskensis RB2256 phenazine biosynthesis PhzC/PhzF protein YP_615707.1 664627 R 317655 CDS YP_615708.1 103486147 4082744 complement(665445..666095) 1 NC_008048.1 pyridoxamine 5'-phosphate oxidase 666095 4082744 Sala_0654 Sphingopyxis alaskensis RB2256 pyridoxamine 5'-phosphate oxidase YP_615708.1 665445 R 317655 CDS YP_615709.1 103486148 4082745 666155..667072 1 NC_008048.1 chaperone DnaJ-like protein 667072 4082745 Sala_0655 Sphingopyxis alaskensis RB2256 chaperone DnaJ-like protein YP_615709.1 666155 D 317655 CDS YP_615710.1 103486149 4082746 667076..668143 1 NC_008048.1 ribonuclease BN 668143 4082746 Sala_0656 Sphingopyxis alaskensis RB2256 ribonuclease BN YP_615710.1 667076 D 317655 CDS YP_615711.1 103486150 4082747 668161..668988 1 NC_008048.1 enoyl-acyl-carrier-protein reductase 668988 4082747 Sala_0657 Sphingopyxis alaskensis RB2256 enoyl-acyl-carrier-protein reductase YP_615711.1 668161 D 317655 CDS YP_615712.1 103486151 4082748 668988..669362 1 NC_008048.1 glyoxalase/bleomycin resistance protein/dioxygenase 669362 4082748 Sala_0658 Sphingopyxis alaskensis RB2256 glyoxalase/bleomycin resistance protein/dioxygenase YP_615712.1 668988 D 317655 CDS YP_615713.1 103486152 4082749 669359..670435 1 NC_008048.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 670435 4082749 Sala_0659 Sphingopyxis alaskensis RB2256 chorismate synthase YP_615713.1 669359 D 317655 CDS YP_615714.1 103486153 4082750 670443..672233 1 NC_008048.1 hypothetical protein 672233 4082750 Sala_0660 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615714.1 670443 D 317655 CDS YP_615715.1 103486154 4082958 672308..673633 1 NC_008048.1 sodium:dicarboxylate symporter 673633 4082958 Sala_0661 Sphingopyxis alaskensis RB2256 sodium:dicarboxylate symporter YP_615715.1 672308 D 317655 CDS YP_615716.1 103486155 4082959 complement(673643..674458) 1 NC_008048.1 hypothetical protein 674458 4082959 Sala_0662 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615716.1 673643 R 317655 CDS YP_615717.1 103486156 4082960 674618..676027 1 NC_008048.1 cytochrome P450 676027 4082960 Sala_0663 Sphingopyxis alaskensis RB2256 cytochrome P450 YP_615717.1 674618 D 317655 CDS YP_615718.1 103486157 4082961 676143..676877 1 NC_008048.1 extensin-like protein 676877 4082961 Sala_0664 Sphingopyxis alaskensis RB2256 extensin-like protein YP_615718.1 676143 D 317655 CDS YP_615719.1 103486158 4082962 676868..677146 1 NC_008048.1 hypothetical protein 677146 4082962 Sala_0665 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615719.1 676868 D 317655 CDS YP_615720.1 103486159 4082963 complement(677133..677579) 1 NC_008048.1 N-acetyltransferase GCN5 677579 4082963 Sala_0666 Sphingopyxis alaskensis RB2256 N-acetyltransferase GCN5 YP_615720.1 677133 R 317655 CDS YP_615721.1 103486160 4082964 complement(677582..677938) 1 NC_008048.1 HesB/YadR/YfhF 677938 4082964 Sala_0667 Sphingopyxis alaskensis RB2256 HesB/YadR/YfhF YP_615721.1 677582 R 317655 CDS YP_615722.1 103486161 4082965 complement(678090..678560) 1 NC_008048.1 hypothetical protein 678560 4082965 Sala_0668 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615722.1 678090 R 317655 CDS YP_615723.1 103486162 4082966 complement(678557..679801) 1 NC_008048.1 SufS subfamily cysteine desulfurase 679801 4082966 Sala_0669 Sphingopyxis alaskensis RB2256 SufS subfamily cysteine desulfurase YP_615723.1 678557 R 317655 CDS YP_615724.1 103486163 4082967 complement(679798..680526) 1 NC_008048.1 SufBD protein 680526 4082967 Sala_0670 Sphingopyxis alaskensis RB2256 SufBD protein YP_615724.1 679798 R 317655 CDS YP_615725.1 103486164 4082968 complement(680732..681475) 1 NC_008048.1 FeS assembly ATPase SufC 681475 4082968 Sala_0671 Sphingopyxis alaskensis RB2256 FeS assembly ATPase SufC YP_615725.1 680732 R 317655 CDS YP_615726.1 103486165 4082969 complement(681462..681977) 1 NC_008048.1 acetyltransferase 681977 4082969 Sala_0672 Sphingopyxis alaskensis RB2256 acetyltransferase YP_615726.1 681462 R 317655 CDS YP_615727.1 103486166 4082970 complement(681974..682495) 1 NC_008048.1 hypothetical protein 682495 4082970 Sala_0673 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615727.1 681974 R 317655 CDS YP_615728.1 103486167 4082971 complement(682492..683979) 1 NC_008048.1 with SufCD activates cysteine desulfurase SufS; cysteine desulfurase activator complex subunit SufB 683979 4082971 Sala_0674 Sphingopyxis alaskensis RB2256 cysteine desulfurase activator complex subunit SufB YP_615728.1 682492 R 317655 CDS YP_615729.1 103486168 4082972 complement(683984..684484) 1 NC_008048.1 BadM/Rrf2 family transcriptional regulator 684484 4082972 Sala_0675 Sphingopyxis alaskensis RB2256 BadM/Rrf2 family transcriptional regulator YP_615729.1 683984 R 317655 CDS YP_615730.1 103486169 4082973 complement(684556..684798) 1 NC_008048.1 hypothetical protein 684798 4082973 Sala_0676 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615730.1 684556 R 317655 CDS YP_615731.1 103486170 4082974 complement(684795..685289) 1 NC_008048.1 transposase, IS4 685289 4082974 Sala_0677 Sphingopyxis alaskensis RB2256 transposase, IS4 YP_615731.1 684795 R 317655 CDS YP_615732.1 103486171 4082975 complement(685639..686526) 1 NC_008048.1 AraC family transcriptional regulator 686526 4082975 Sala_0678 Sphingopyxis alaskensis RB2256 AraC family transcriptional regulator YP_615732.1 685639 R 317655 CDS YP_615733.1 103486172 4082976 complement(686628..688445) 1 NC_008048.1 hypothetical protein 688445 4082976 Sala_0679 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615733.1 686628 R 317655 CDS YP_615734.1 103486173 4082977 688516..689586 1 NC_008048.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 689586 4082977 Sala_0680 Sphingopyxis alaskensis RB2256 dihydroorotate dehydrogenase 2 YP_615734.1 688516 D 317655 CDS YP_615735.1 103486174 4081940 689632..691359 1 NC_008048.1 gamma-glutamyltransferase 691359 4081940 Sala_0681 Sphingopyxis alaskensis RB2256 gamma-glutamyltransferase YP_615735.1 689632 D 317655 CDS YP_615736.1 103486175 4081941 691469..693274 1 NC_008048.1 AMP-dependent synthetase and ligase 693274 4081941 Sala_0682 Sphingopyxis alaskensis RB2256 AMP-dependent synthetase and ligase YP_615736.1 691469 D 317655 CDS YP_615737.1 103486176 4081942 complement(693375..693899) 1 NC_008048.1 hypothetical protein 693899 4081942 Sala_0683 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615737.1 693375 R 317655 CDS YP_615738.1 103486177 4081943 complement(693889..694629) 1 NC_008048.1 hydroxyacylglutathione hydrolase 694629 4081943 Sala_0684 Sphingopyxis alaskensis RB2256 hydroxyacylglutathione hydrolase YP_615738.1 693889 R 317655 CDS YP_615739.1 103486178 4081944 complement(694744..695181) 1 NC_008048.1 glyoxalase/bleomycin resistance protein/dioxygenase 695181 4081944 Sala_0685 Sphingopyxis alaskensis RB2256 glyoxalase/bleomycin resistance protein/dioxygenase YP_615739.1 694744 R 317655 CDS YP_615740.1 103486179 4081945 complement(695191..695628) 1 NC_008048.1 4-hydroxybenzoyl-CoA thioesterase 695628 4081945 Sala_0686 Sphingopyxis alaskensis RB2256 4-hydroxybenzoyl-CoA thioesterase YP_615740.1 695191 R 317655 CDS YP_615741.1 103486180 4081946 complement(695706..696470) 1 NC_008048.1 alpha/beta hydrolase 696470 4081946 Sala_0687 Sphingopyxis alaskensis RB2256 alpha/beta hydrolase YP_615741.1 695706 R 317655 CDS YP_615742.1 103486181 4081947 complement(696600..696854) 1 NC_008048.1 hypothetical protein 696854 4081947 Sala_0688 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615742.1 696600 R 317655 CDS YP_615743.1 103486182 4081948 complement(696926..697117) 1 NC_008048.1 XRE family transcriptional regulator 697117 4081948 Sala_0689 Sphingopyxis alaskensis RB2256 XRE family transcriptional regulator YP_615743.1 696926 R 317655 CDS YP_615744.1 103486183 4081949 complement(697114..697527) 1 NC_008048.1 hypothetical protein 697527 4081949 Sala_0690 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615744.1 697114 R 317655 CDS YP_615745.1 103486184 4081950 697770..698096 1 NC_008048.1 hypothetical protein 698096 4081950 Sala_0691 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615745.1 697770 D 317655 CDS YP_615746.1 103486185 4081951 698389..700392 1 NC_008048.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 700392 thrS 4081951 thrS Sphingopyxis alaskensis RB2256 threonyl-tRNA synthetase YP_615746.1 698389 D 317655 CDS YP_615747.1 103486186 4081952 700389..701075 1 NC_008048.1 AraC family transcriptional regulator 701075 4081952 Sala_0693 Sphingopyxis alaskensis RB2256 AraC family transcriptional regulator YP_615747.1 700389 D 317655 CDS YP_615748.1 103486187 4081953 701085..702242 1 NC_008048.1 hypothetical protein 702242 4081953 Sala_0694 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615748.1 701085 D 317655 CDS YP_615749.1 103486188 4081954 702284..703042 1 NC_008048.1 hypothetical protein 703042 4081954 Sala_0695 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615749.1 702284 D 317655 CDS YP_615750.1 103486189 4081955 703112..703558 1 NC_008048.1 hypothetical protein 703558 4081955 Sala_0696 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615750.1 703112 D 317655 CDS YP_615751.1 103486190 4081956 703555..703920 1 NC_008048.1 PilT protein-like protein 703920 4081956 Sala_0697 Sphingopyxis alaskensis RB2256 PilT protein-like protein YP_615751.1 703555 D 317655 CDS YP_615752.1 103486191 4081957 complement(703941..706442) 1 NC_008048.1 hypothetical protein 706442 4081957 Sala_0698 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615752.1 703941 R 317655 CDS YP_615753.1 103486192 4081958 complement(706558..707259) 1 NC_008048.1 ABC transporter 707259 4081958 Sala_0699 Sphingopyxis alaskensis RB2256 ABC transporter YP_615753.1 706558 R 317655 CDS YP_615754.1 103486193 4081789 707277..707990 1 NC_008048.1 lipolytic protein G-D-S-L 707990 4081789 Sala_0700 Sphingopyxis alaskensis RB2256 lipolytic protein G-D-S-L YP_615754.1 707277 D 317655 CDS YP_615755.1 103486194 4081790 complement(708029..708352) 1 NC_008048.1 hypothetical protein 708352 4081790 Sala_0701 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615755.1 708029 R 317655 CDS YP_615756.1 103486195 4081791 complement(708439..708897) 1 NC_008048.1 hypothetical protein 708897 4081791 Sala_0702 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615756.1 708439 R 317655 CDS YP_615757.1 103486196 4081792 complement(709125..710387) 1 NC_008048.1 hypothetical protein 710387 4081792 Sala_0703 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615757.1 709125 R 317655 CDS YP_615758.1 103486197 4081793 710389..710706 1 NC_008048.1 hypothetical protein 710706 4081793 Sala_0704 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615758.1 710389 D 317655 CDS YP_615759.1 103486198 4081794 complement(710673..711002) 1 NC_008048.1 hypothetical protein 711002 4081794 Sala_0705 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615759.1 710673 R 317655 CDS YP_615760.1 103486199 4081795 711153..712034 1 NC_008048.1 LysR family transcriptional regulator 712034 4081795 Sala_0706 Sphingopyxis alaskensis RB2256 LysR family transcriptional regulator YP_615760.1 711153 D 317655 CDS YP_615761.1 103486200 4081796 complement(712035..712535) 1 NC_008048.1 hypothetical protein 712535 4081796 Sala_0707 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615761.1 712035 R 317655 CDS YP_615762.1 103486201 4081797 712708..713823 1 NC_008048.1 binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 713823 4081797 Sala_0708 Sphingopyxis alaskensis RB2256 DNA polymerase III subunit beta YP_615762.1 712708 D 317655 CDS YP_615763.1 103486202 4081798 complement(713929..715272) 1 NC_008048.1 L-sorbosone dehydrogenase 715272 4081798 Sala_0709 Sphingopyxis alaskensis RB2256 L-sorbosone dehydrogenase YP_615763.1 713929 R 317655 CDS YP_615764.1 103486203 4081799 715452..715667 1 NC_008048.1 hypothetical protein 715667 4081799 Sala_0710 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615764.1 715452 D 317655 CDS YP_615765.1 103486204 4081800 complement(715661..716596) 1 NC_008048.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis; N-acetyl-gamma-glutamyl-phosphate reductase 716596 4081800 Sala_0711 Sphingopyxis alaskensis RB2256 N-acetyl-gamma-glutamyl-phosphate reductase YP_615765.1 715661 R 317655 CDS YP_615766.1 103486205 4081801 complement(716599..717519) 1 NC_008048.1 cell wall-associated hydrolase 717519 4081801 Sala_0712 Sphingopyxis alaskensis RB2256 cell wall-associated hydrolase YP_615766.1 716599 R 317655 CDS YP_615767.1 103486206 4081802 complement(717618..719021) 1 NC_008048.1 leucyl aminopeptidase 719021 4081802 Sala_0713 Sphingopyxis alaskensis RB2256 leucyl aminopeptidase YP_615767.1 717618 R 317655 CDS YP_615768.1 103486207 4081803 719077..719916 1 NC_008048.1 hypothetical protein 719916 4081803 Sala_0714 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615768.1 719077 D 317655 CDS YP_615769.1 103486208 4081804 complement(720136..721647) 1 NC_008048.1 monooxygenase flavin-binding family protein 721647 4081804 Sala_0715 Sphingopyxis alaskensis RB2256 monooxygenase flavin-binding family protein YP_615769.1 720136 R 317655 CDS YP_615770.1 103486209 4081805 722321..722965 1 NC_008048.1 hypothetical protein 722965 4081805 Sala_0716 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615770.1 722321 D 317655 CDS YP_615771.1 103486210 4081806 723152..724165 1 NC_008048.1 phosphate transporter 724165 4081806 Sala_0717 Sphingopyxis alaskensis RB2256 phosphate transporter YP_615771.1 723152 D 317655 CDS YP_615772.1 103486211 4081807 complement(724305..725672) 1 NC_008048.1 catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit; 30S ribosomal protein S12 methylthiotransferase 725672 rimO 4081807 rimO Sphingopyxis alaskensis RB2256 30S ribosomal protein S12 methylthiotransferase YP_615772.1 724305 R 317655 CDS YP_615773.1 103486212 4081808 725757..726158 1 NC_008048.1 hypothetical protein 726158 4081808 Sala_0719 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615773.1 725757 D 317655 CDS YP_615774.1 103486213 4081340 complement(726177..727244) 1 NC_008048.1 hypothetical protein 727244 4081340 Sala_0720 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615774.1 726177 R 317655 CDS YP_615775.1 103486214 4081341 complement(727399..728220) 1 NC_008048.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 728220 surE 4081341 surE Sphingopyxis alaskensis RB2256 stationary phase survival protein SurE YP_615775.1 727399 R 317655 CDS YP_615776.1 103486215 4081342 complement(728289..729569) 1 NC_008048.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 729569 4081342 Sala_0722 Sphingopyxis alaskensis RB2256 seryl-tRNA synthetase YP_615776.1 728289 R 317655 CDS YP_615777.1 103486216 4081343 complement(729706..731151) 1 NC_008048.1 hypothetical protein 731151 4081343 Sala_0723 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615777.1 729706 R 317655 CDS YP_615778.1 103486217 4081344 731379..731840 1 NC_008048.1 TraR/DksA family transcriptional regulator 731840 4081344 Sala_0724 Sphingopyxis alaskensis RB2256 TraR/DksA family transcriptional regulator YP_615778.1 731379 D 317655 CDS YP_615779.1 103486218 4081345 731929..732318 1 NC_008048.1 type IV pilus assembly PilZ 732318 4081345 Sala_0725 Sphingopyxis alaskensis RB2256 type IV pilus assembly PilZ YP_615779.1 731929 D 317655 CDS YP_615780.1 103486219 4081346 732647..732844 1 NC_008048.1 hypothetical protein 732844 4081346 Sala_0726 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615780.1 732647 D 317655 CDS YP_615781.1 103486220 4081347 732977..733417 1 NC_008048.1 hypothetical protein 733417 4081347 Sala_0727 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615781.1 732977 D 317655 CDS YP_615782.1 103486221 4081348 733737..734429 1 NC_008048.1 DSBA oxidoreductase 734429 4081348 Sala_0728 Sphingopyxis alaskensis RB2256 DSBA oxidoreductase YP_615782.1 733737 D 317655 CDS YP_615783.1 103486222 4081349 734514..736103 1 NC_008048.1 sulfatase 736103 4081349 Sala_0729 Sphingopyxis alaskensis RB2256 sulfatase YP_615783.1 734514 D 317655 CDS YP_615784.1 103486223 4081350 736267..736905 1 NC_008048.1 hypothetical protein 736905 4081350 Sala_0730 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615784.1 736267 D 317655 CDS YP_615785.1 103486224 4081351 complement(737022..737810) 1 NC_008048.1 hypothetical protein 737810 4081351 Sala_0731 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615785.1 737022 R 317655 CDS YP_615786.1 103486225 4081352 complement(737807..738535) 1 NC_008048.1 hypothetical protein 738535 4081352 Sala_0732 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615786.1 737807 R 317655 CDS YP_615787.1 103486226 4081353 complement(738816..739130) 1 NC_008048.1 excinuclease ABC subunit C 739130 4081353 Sala_0733 Sphingopyxis alaskensis RB2256 excinuclease ABC subunit C YP_615787.1 738816 R 317655 CDS YP_615788.1 103486227 4081355 complement(740222..740860) 1 NC_008048.1 TetR family transcriptional regulator 740860 4081355 Sala_0735 Sphingopyxis alaskensis RB2256 TetR family transcriptional regulator YP_615788.1 740222 R 317655 CDS YP_615789.1 103486228 4081356 740966..741661 1 NC_008048.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 741661 4081356 Sala_0736 Sphingopyxis alaskensis RB2256 enoyl-CoA hydratase YP_615789.1 740966 D 317655 CDS YP_615790.1 103486229 4081357 complement(741811..742848) 1 NC_008048.1 glycoside hydrolase 742848 4081357 Sala_0737 Sphingopyxis alaskensis RB2256 glycoside hydrolase YP_615790.1 741811 R 317655 CDS YP_615791.1 103486230 4081358 complement(742845..743924) 1 NC_008048.1 aldose 1-epimerase 743924 4081358 Sala_0738 Sphingopyxis alaskensis RB2256 aldose 1-epimerase YP_615791.1 742845 R 317655 CDS YP_615792.1 103486231 4081149 744038..745084 1 NC_008048.1 glycoside hydrolase 745084 4081149 Sala_0739 Sphingopyxis alaskensis RB2256 glycoside hydrolase YP_615792.1 744038 D 317655 CDS YP_615793.1 103486232 4081150 complement(745041..746558) 1 NC_008048.1 tryptophan halogenase 746558 4081150 Sala_0740 Sphingopyxis alaskensis RB2256 tryptophan halogenase YP_615793.1 745041 R 317655 CDS YP_615794.1 103486233 4081151 complement(746639..749395) 1 NC_008048.1 TonB-dependent receptor 749395 4081151 Sala_0741 Sphingopyxis alaskensis RB2256 TonB-dependent receptor YP_615794.1 746639 R 317655 CDS YP_615795.1 103486234 4081152 complement(749522..750658) 1 NC_008048.1 galactonate dehydratase 750658 4081152 Sala_0742 Sphingopyxis alaskensis RB2256 galactonate dehydratase YP_615795.1 749522 R 317655 CDS YP_615796.1 103486235 4081153 750803..751702 1 NC_008048.1 2-dehydro-3-deoxygalactonokinase 751702 4081153 Sala_0743 Sphingopyxis alaskensis RB2256 2-dehydro-3-deoxygalactonokinase YP_615796.1 750803 D 317655 CDS YP_615797.1 103486236 4081154 751699..752343 1 NC_008048.1 KDPG and KHG aldolase 752343 4081154 Sala_0744 Sphingopyxis alaskensis RB2256 KDPG and KHG aldolase YP_615797.1 751699 D 317655 CDS YP_615798.1 103486237 4081155 752340..753260 1 NC_008048.1 D-galactose 1-dehydrogenase 753260 4081155 Sala_0745 Sphingopyxis alaskensis RB2256 D-galactose 1-dehydrogenase YP_615798.1 752340 D 317655 CDS YP_615799.1 103486238 4081156 753326..754051 1 NC_008048.1 GntR family transcriptional regulator 754051 4081156 Sala_0746 Sphingopyxis alaskensis RB2256 GntR family transcriptional regulator YP_615799.1 753326 D 317655 CDS YP_615800.1 103486239 4081157 754052..754906 1 NC_008048.1 senescence marker protein-30 754906 4081157 Sala_0747 Sphingopyxis alaskensis RB2256 senescence marker protein-30 YP_615800.1 754052 D 317655 CDS YP_615801.1 103486240 4081158 complement(754854..756215) 1 NC_008048.1 extracellular solute-binding protein 756215 4081158 Sala_0748 Sphingopyxis alaskensis RB2256 extracellular solute-binding protein YP_615801.1 754854 R 317655 CDS YP_615802.1 103486241 4081159 complement(756212..757048) 1 NC_008048.1 binding-protein-dependent transport system inner membrane protein 757048 4081159 Sala_0749 Sphingopyxis alaskensis RB2256 binding-protein-dependent transport system inner membrane protein YP_615802.1 756212 R 317655 CDS YP_615803.1 103486242 4081160 complement(757045..757917) 1 NC_008048.1 binding-protein-dependent transport system inner membrane protein 757917 4081160 Sala_0750 Sphingopyxis alaskensis RB2256 binding-protein-dependent transport system inner membrane protein YP_615803.1 757045 R 317655 CDS YP_615804.1 103486243 4081161 complement(757914..759011) 1 NC_008048.1 ABC transporter 759011 4081161 Sala_0751 Sphingopyxis alaskensis RB2256 ABC transporter YP_615804.1 757914 R 317655 CDS YP_615805.1 103486244 4081162 complement(759069..759902) 1 NC_008048.1 phytanoyl-CoA dioxygenase 759902 4081162 Sala_0752 Sphingopyxis alaskensis RB2256 phytanoyl-CoA dioxygenase YP_615805.1 759069 R 317655 CDS YP_615806.1 103486245 4081163 759986..761383 1 NC_008048.1 glycoside hydrolase 761383 4081163 Sala_0753 Sphingopyxis alaskensis RB2256 glycoside hydrolase YP_615806.1 759986 D 317655 CDS YP_615807.1 103486246 4081164 761621..763270 1 NC_008048.1 peptide chain release factor 3 763270 4081164 Sala_0754 Sphingopyxis alaskensis RB2256 peptide chain release factor 3 YP_615807.1 761621 D 317655 CDS YP_615808.1 103486247 4081165 763328..763798 1 NC_008048.1 hypothetical protein 763798 4081165 Sala_0755 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615808.1 763328 D 317655 CDS YP_615809.1 103486248 4081166 complement(764045..765175) 1 NC_008048.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV 765175 4081166 Sala_0756 Sphingopyxis alaskensis RB2256 DNA polymerase IV YP_615809.1 764045 R 317655 CDS YP_615810.1 103486249 4080900 765545..766156 1 NC_008048.1 hypothetical protein 766156 4080900 Sala_0757 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615810.1 765545 D 317655 CDS YP_615811.1 103486250 4080901 766297..767031 1 NC_008048.1 two component transcriptional regulator 767031 4080901 Sala_0758 Sphingopyxis alaskensis RB2256 two component transcriptional regulator YP_615811.1 766297 D 317655 CDS YP_615812.1 103486251 4080902 767085..768377 1 NC_008048.1 sensor signal transduction histidine kinase 768377 4080902 Sala_0759 Sphingopyxis alaskensis RB2256 sensor signal transduction histidine kinase YP_615812.1 767085 D 317655 CDS YP_615813.1 103486252 4080903 complement(768488..769288) 1 NC_008048.1 hypothetical protein 769288 4080903 Sala_0760 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615813.1 768488 R 317655 CDS YP_615814.1 103486253 4080904 complement(769296..770468) 1 NC_008048.1 saccharopine dehydrogenase 770468 4080904 Sala_0761 Sphingopyxis alaskensis RB2256 saccharopine dehydrogenase YP_615814.1 769296 R 317655 CDS YP_615815.1 103486254 4080905 complement(770669..771223) 1 NC_008048.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase 771223 dcd 4080905 dcd Sphingopyxis alaskensis RB2256 deoxycytidine triphosphate deaminase YP_615815.1 770669 R 317655 CDS YP_615816.1 103486255 4080906 complement(771263..771718) 1 NC_008048.1 cytidine deaminase 771718 4080906 Sala_0763 Sphingopyxis alaskensis RB2256 cytidine deaminase YP_615816.1 771263 R 317655 CDS YP_615817.1 103486256 4080907 complement(771715..772470) 1 NC_008048.1 glycoside hydrolase 772470 4080907 Sala_0764 Sphingopyxis alaskensis RB2256 glycoside hydrolase YP_615817.1 771715 R 317655 CDS YP_615818.1 103486257 4080908 complement(772473..772970) 1 NC_008048.1 hypothetical protein 772970 4080908 Sala_0765 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615818.1 772473 R 317655 CDS YP_615819.1 103486258 4080909 773221..774732 1 NC_008048.1 unwinds double stranded DNA; replicative DNA helicase 774732 4080909 Sala_0766 Sphingopyxis alaskensis RB2256 replicative DNA helicase YP_615819.1 773221 D 317655 CDS YP_615820.1 103486259 4080910 complement(774827..775135) 1 NC_008048.1 excinuclease ABC subunit C 775135 4080910 Sala_0767 Sphingopyxis alaskensis RB2256 excinuclease ABC subunit C YP_615820.1 774827 R 317655 CDS YP_615821.1 103486260 4080911 complement(775176..775982) 1 NC_008048.1 catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite; phosphoadenosine phosphosulfate reductase 775982 4080911 Sala_0768 Sphingopyxis alaskensis RB2256 phosphoadenosine phosphosulfate reductase YP_615821.1 775176 R 317655 CDS YP_615822.1 103486261 4080912 complement(776047..776493) 1 NC_008048.1 hypothetical protein 776493 4080912 Sala_0769 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615822.1 776047 R 317655 CDS YP_615823.1 103486262 4080913 complement(776486..778117) 1 NC_008048.1 nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like protein 778117 4080913 Sala_0770 Sphingopyxis alaskensis RB2256 nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like protein YP_615823.1 776486 R 317655 CDS YP_615824.1 103486263 4080914 complement(778119..778415) 1 NC_008048.1 hypothetical protein 778415 4080914 Sala_0771 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615824.1 778119 R 317655 CDS YP_615825.1 103486264 4080915 complement(778412..779293) 1 NC_008048.1 uroporphyrin-III C-methyltransferase 779293 4080915 Sala_0772 Sphingopyxis alaskensis RB2256 uroporphyrin-III C-methyltransferase YP_615825.1 778412 R 317655 CDS YP_615826.1 103486265 4080916 complement(779323..780768) 1 NC_008048.1 a high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity; converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH; succinylglutamic semialdehyde dehydrogenase 780768 astD 4080916 astD Sphingopyxis alaskensis RB2256 succinylglutamic semialdehyde dehydrogenase YP_615826.1 779323 R 317655 CDS YP_615827.1 103486266 4080917 780895..781818 1 NC_008048.1 alpha/beta hydrolase 781818 4080917 Sala_0774 Sphingopyxis alaskensis RB2256 alpha/beta hydrolase YP_615827.1 780895 D 317655 CDS YP_615828.1 103486267 4080918 781815..782987 1 NC_008048.1 group 1 glycosyl transferase 782987 4080918 Sala_0775 Sphingopyxis alaskensis RB2256 group 1 glycosyl transferase YP_615828.1 781815 D 317655 CDS YP_615829.1 103486268 4080419 783072..784475 1 NC_008048.1 2-nitropropane dioxygenase 784475 4080419 Sala_0776 Sphingopyxis alaskensis RB2256 2-nitropropane dioxygenase YP_615829.1 783072 D 317655 CDS YP_615830.1 103486269 4080420 784517..784840 1 NC_008048.1 hypothetical protein 784840 4080420 Sala_0777 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615830.1 784517 D 317655 CDS YP_615831.1 103486270 4080421 complement(784880..785878) 1 NC_008048.1 glycolate reductase 785878 4080421 Sala_0778 Sphingopyxis alaskensis RB2256 glycolate reductase YP_615831.1 784880 R 317655 CDS YP_615832.1 103486271 4080422 786122..786463 1 NC_008048.1 hypothetical protein 786463 4080422 Sala_0779 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615832.1 786122 D 317655 CDS YP_615833.1 103486272 4080423 complement(786695..787162) 1 NC_008048.1 hypothetical protein 787162 4080423 Sala_0780 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615833.1 786695 R 317655 CDS YP_615834.1 103486273 4080424 complement(787380..788567) 1 NC_008048.1 Acetyl-CoA C-acetyltransferase 788567 4080424 Sala_0781 Sphingopyxis alaskensis RB2256 Acetyl-CoA C-acetyltransferase YP_615834.1 787380 R 317655 CDS YP_615835.1 103486274 4080425 788724..790178 1 NC_008048.1 aldehyde dehydrogenase 790178 4080425 Sala_0782 Sphingopyxis alaskensis RB2256 aldehyde dehydrogenase YP_615835.1 788724 D 317655 CDS YP_615836.1 103486275 4080426 complement(790306..791403) 1 NC_008048.1 hypothetical protein 791403 4080426 Sala_0783 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615836.1 790306 R 317655 CDS YP_615837.1 103486276 4080428 791654..793426 1 NC_008048.1 copper-resistance protein CopA 793426 4080428 Sala_0784 Sphingopyxis alaskensis RB2256 copper-resistance protein CopA YP_615837.1 791654 D 317655 CDS YP_615838.1 103486277 4080429 793423..794388 1 NC_008048.1 copper resistance B 794388 4080429 Sala_0785 Sphingopyxis alaskensis RB2256 copper resistance B YP_615838.1 793423 D 317655 CDS YP_615839.1 103486278 4080430 complement(794477..795088) 1 NC_008048.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 795088 rpsD 4080430 rpsD Sphingopyxis alaskensis RB2256 30S ribosomal protein S4 YP_615839.1 794477 R 317655 CDS YP_615840.1 103486279 4080431 795195..795602 1 NC_008048.1 chorismate mutase 795602 4080431 Sala_0787 Sphingopyxis alaskensis RB2256 chorismate mutase YP_615840.1 795195 D 317655 CDS YP_615841.1 103486280 4080432 complement(795615..796361) 1 NC_008048.1 tRNA/rRNA methyltransferase SpoU 796361 4080432 Sala_0788 Sphingopyxis alaskensis RB2256 tRNA/rRNA methyltransferase SpoU YP_615841.1 795615 R 317655 CDS YP_615842.1 103486281 4080433 complement(796358..796825) 1 NC_008048.1 transcriptional regulator NrdR 796825 nrdR 4080433 nrdR Sphingopyxis alaskensis RB2256 transcriptional regulator NrdR YP_615842.1 796358 R 317655 CDS YP_615843.1 103486282 4080434 complement(796829..797047) 1 NC_008048.1 hypothetical protein 797047 4080434 Sala_0790 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615843.1 796829 R 317655 CDS YP_615844.1 103486283 4080435 complement(797053..798360) 1 NC_008048.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 798360 glyA 4080435 glyA Sphingopyxis alaskensis RB2256 serine hydroxymethyltransferase YP_615844.1 797053 R 317655 CDS YP_615845.1 103486284 4080436 complement(798357..798809) 1 NC_008048.1 RpiB/LacA/LacB family sugar-phosphate isomerase 798809 4080436 Sala_0792 Sphingopyxis alaskensis RB2256 RpiB/LacA/LacB family sugar-phosphate isomerase YP_615845.1 798357 R 317655 CDS YP_615846.1 103486285 4080437 complement(799193..799849) 1 NC_008048.1 hydrolase 799849 4080437 Sala_0793 Sphingopyxis alaskensis RB2256 hydrolase YP_615846.1 799193 R 317655 CDS YP_615847.1 103486286 4080343 799990..801081 1 NC_008048.1 class V aminotransferase 801081 4080343 Sala_0794 Sphingopyxis alaskensis RB2256 class V aminotransferase YP_615847.1 799990 D 317655 CDS YP_615848.1 103486287 4080344 801081..801416 1 NC_008048.1 ferredoxin 801416 4080344 Sala_0795 Sphingopyxis alaskensis RB2256 ferredoxin YP_615848.1 801081 D 317655 CDS YP_615849.1 103486288 4080345 801674..803371 1 NC_008048.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau 803371 4080345 Sala_0796 Sphingopyxis alaskensis RB2256 DNA polymerase III subunits gamma and tau YP_615849.1 801674 D 317655 CDS YP_615850.1 103486289 4080346 803368..803703 1 NC_008048.1 hypothetical protein 803703 4080346 Sala_0797 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615850.1 803368 D 317655 CDS YP_615851.1 103486290 4080347 803907..806303 1 NC_008048.1 ATP-dependent protease La 806303 4080347 Sala_0798 Sphingopyxis alaskensis RB2256 ATP-dependent protease La YP_615851.1 803907 D 317655 CDS YP_615852.1 103486291 4080348 806471..806743 1 NC_008048.1 histone-like DNA-binding protein 806743 4080348 Sala_0799 Sphingopyxis alaskensis RB2256 histone-like DNA-binding protein YP_615852.1 806471 D 317655 CDS YP_615853.1 103486292 4080350 807098..807406 1 NC_008048.1 hypothetical protein 807406 4080350 Sala_0800 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615853.1 807098 D 317655 CDS YP_615854.1 103486293 4080351 807523..808188 1 NC_008048.1 two component transcriptional regulator 808188 4080351 Sala_0801 Sphingopyxis alaskensis RB2256 two component transcriptional regulator YP_615854.1 807523 D 317655 CDS YP_615855.1 103486294 4080352 808286..809677 1 NC_008048.1 sensor signal transduction histidine kinase 809677 4080352 Sala_0802 Sphingopyxis alaskensis RB2256 sensor signal transduction histidine kinase YP_615855.1 808286 D 317655 CDS YP_615856.1 103486295 4080353 complement(809791..810300) 1 NC_008048.1 putative ISRm2011-2 transposase protein 810300 4080353 Sala_0803 Sphingopyxis alaskensis RB2256 putative ISRm2011-2 transposase protein YP_615856.1 809791 R 317655 CDS YP_615857.1 103486296 4080354 810846..811391 1 NC_008048.1 transposase, IS111A/IS1328/IS1533 811391 4080354 Sala_0804 Sphingopyxis alaskensis RB2256 transposase, IS111A/IS1328/IS1533 YP_615857.1 810846 D 317655 CDS YP_615858.1 103486297 4080355 complement(811857..812282) 1 NC_008048.1 biopolymer transport protein ExbD/TolR 812282 4080355 Sala_0805 Sphingopyxis alaskensis RB2256 biopolymer transport protein ExbD/TolR YP_615858.1 811857 R 317655 CDS YP_615859.1 103486298 4080356 complement(812315..812836) 1 NC_008048.1 biopolymer transport ExbD protein 812836 4080356 Sala_0806 Sphingopyxis alaskensis RB2256 biopolymer transport ExbD protein YP_615859.1 812315 R 317655 CDS YP_615860.1 103486299 4080357 complement(812940..813761) 1 NC_008048.1 MotA/TolQ/ExbB proton channel 813761 4080357 Sala_0807 Sphingopyxis alaskensis RB2256 MotA/TolQ/ExbB proton channel YP_615860.1 812940 R 317655 CDS YP_615861.1 103486300 4080358 complement(813821..814474) 1 NC_008048.1 TonB-like protein 814474 4080358 Sala_0808 Sphingopyxis alaskensis RB2256 TonB-like protein YP_615861.1 813821 R 317655 CDS YP_615862.1 103486301 4080359 814753..815634 1 NC_008048.1 hypothetical protein 815634 4080359 Sala_0809 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615862.1 814753 D 317655 CDS YP_615863.1 103486302 4080360 815749..817083 1 NC_008048.1 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 817083 4080360 Sala_0810 Sphingopyxis alaskensis RB2256 homoserine dehydrogenase YP_615863.1 815749 D 317655 CDS YP_615864.1 103486303 4080458 817940..818254 1 NC_008048.1 hypothetical protein 818254 4080458 Sala_0812 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615864.1 817940 D 317655 CDS YP_615865.1 103486304 4080459 complement(818229..818957) 1 NC_008048.1 hypothetical protein 818957 4080459 Sala_0813 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615865.1 818229 R 317655 CDS YP_615866.1 103486305 4080460 819123..819737 1 NC_008048.1 2',5' RNA ligase 819737 4080460 Sala_0814 Sphingopyxis alaskensis RB2256 2',5' RNA ligase YP_615866.1 819123 D 317655 CDS YP_615867.1 103486306 4080461 complement(819647..820132) 1 NC_008048.1 protein tyrosine phosphatase 820132 4080461 Sala_0815 Sphingopyxis alaskensis RB2256 protein tyrosine phosphatase YP_615867.1 819647 R 317655 CDS YP_615868.1 103486307 4080462 820239..821849 1 NC_008048.1 major facilitator superfamily transporter 821849 4080462 Sala_0816 Sphingopyxis alaskensis RB2256 major facilitator superfamily transporter YP_615868.1 820239 D 317655 CDS YP_615869.1 103486308 4080463 complement(821854..822534) 1 NC_008048.1 superoxide dismutase, copper/zinc binding 822534 4080463 Sala_0817 Sphingopyxis alaskensis RB2256 superoxide dismutase, copper/zinc binding YP_615869.1 821854 R 317655 CDS YP_615870.1 103486309 4080464 822995..823669 1 NC_008048.1 transposase and inactivated derivative 823669 4080464 Sala_0818 Sphingopyxis alaskensis RB2256 transposase and inactivated derivative YP_615870.1 822995 D 317655 CDS YP_615871.1 103486310 4080465 823687..823947 1 NC_008048.1 hypothetical protein 823947 4080465 Sala_0819 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615871.1 823687 D 317655 CDS YP_615872.1 103486311 4080467 complement(824797..825495) 1 NC_008048.1 two component transcriptional regulator 825495 4080467 Sala_0821 Sphingopyxis alaskensis RB2256 two component transcriptional regulator YP_615872.1 824797 R 317655 CDS YP_615873.1 103486312 4080468 complement(825495..826217) 1 NC_008048.1 phosphate uptake regulator PhoU 826217 4080468 Sala_0822 Sphingopyxis alaskensis RB2256 phosphate uptake regulator PhoU YP_615873.1 825495 R 317655 CDS YP_615874.1 103486313 4080469 complement(826336..827118) 1 NC_008048.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein 827118 4080469 Sala_0823 Sphingopyxis alaskensis RB2256 phosphate transporter ATP-binding protein YP_615874.1 826336 R 317655 CDS YP_615875.1 103486314 4080470 complement(827135..828391) 1 NC_008048.1 phosphate ABC transporter permease 828391 4080470 Sala_0824 Sphingopyxis alaskensis RB2256 phosphate ABC transporter permease YP_615875.1 827135 R 317655 CDS YP_615876.1 103486315 4080471 complement(828384..829760) 1 NC_008048.1 phosphate ABC transporter permease 829760 4080471 Sala_0825 Sphingopyxis alaskensis RB2256 phosphate ABC transporter permease YP_615876.1 828384 R 317655 CDS YP_615877.1 103486316 4080472 complement(830073..831134) 1 NC_008048.1 phosphate binding protein 831134 4080472 Sala_0826 Sphingopyxis alaskensis RB2256 phosphate binding protein YP_615877.1 830073 R 317655 CDS YP_615878.1 103486317 4080473 complement(831276..832121) 1 NC_008048.1 hypothetical protein 832121 4080473 Sala_0827 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615878.1 831276 R 317655 CDS YP_615879.1 103486318 4080474 832310..832618 1 NC_008048.1 antibiotic biosynthesis monooxygenase 832618 4080474 Sala_0828 Sphingopyxis alaskensis RB2256 antibiotic biosynthesis monooxygenase YP_615879.1 832310 D 317655 CDS YP_615880.1 103486319 4080475 complement(833336..834619) 1 NC_008048.1 citrate synthase I 834619 4080475 Sala_0829 Sphingopyxis alaskensis RB2256 citrate synthase I YP_615880.1 833336 R 317655 CDS YP_615881.1 103486320 4080476 complement(834658..836130) 1 NC_008048.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 836130 4080476 Sala_0830 Sphingopyxis alaskensis RB2256 glutamyl-tRNA synthetase YP_615881.1 834658 R 317655 CDS YP_615882.1 103486321 4080039 836189..838348 1 NC_008048.1 ComEC/Rec2-like protein 838348 4080039 Sala_0831 Sphingopyxis alaskensis RB2256 ComEC/Rec2-like protein YP_615882.1 836189 D 317655 CDS YP_615883.1 103486322 4080040 complement(838302..838985) 1 NC_008048.1 Represses a number of genes involved in the response to DNA damage; LexA repressor 838985 4080040 Sala_0832 Sphingopyxis alaskensis RB2256 LexA repressor YP_615883.1 838302 R 317655 CDS YP_615884.1 103486323 4080041 complement(839060..840250) 1 NC_008048.1 MoeA-like domain-containing protein 840250 4080041 Sala_0833 Sphingopyxis alaskensis RB2256 MoeA-like domain-containing protein YP_615884.1 839060 R 317655 CDS YP_615885.1 103486324 4080042 complement(840247..841080) 1 NC_008048.1 molybdenum cofactor biosynthesis protein C 841080 4080042 Sala_0834 Sphingopyxis alaskensis RB2256 molybdenum cofactor biosynthesis protein C YP_615885.1 840247 R 317655 CDS YP_615886.1 103486325 4080043 complement(841089..841874) 1 NC_008048.1 Indole-3-glycerol phosphate synthase 841874 4080043 Sala_0835 Sphingopyxis alaskensis RB2256 Indole-3-glycerol phosphate synthase YP_615886.1 841089 R 317655 CDS YP_615887.1 103486326 4080044 complement(842002..843000) 1 NC_008048.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 843000 trpD 4080044 trpD Sphingopyxis alaskensis RB2256 anthranilate phosphoribosyltransferase YP_615887.1 842002 R 317655 CDS YP_615888.1 103486327 4080045 complement(842997..843587) 1 NC_008048.1 glutamine amidotransferase of anthranilate synthase or para-aminobenzoate synthase 843587 4080045 Sala_0837 Sphingopyxis alaskensis RB2256 glutamine amidotransferase of anthranilate synthase or para-aminobenzoate synthase YP_615888.1 842997 R 317655 CDS YP_615889.1 103486328 4080046 complement(843674..844957) 1 NC_008048.1 hypothetical protein 844957 4080046 Sala_0838 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615889.1 843674 R 317655 CDS YP_615890.1 103486329 4080047 845068..846840 1 NC_008048.1 hypothetical protein 846840 4080047 Sala_0839 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615890.1 845068 D 317655 CDS YP_615891.1 103486330 4080048 846906..847208 1 NC_008048.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C 847208 gatC 4080048 gatC Sphingopyxis alaskensis RB2256 aspartyl/glutamyl-tRNA amidotransferase subunit C YP_615891.1 846906 D 317655 CDS YP_615892.1 103486331 4080049 847208..848689 1 NC_008048.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 848689 gatA 4080049 gatA Sphingopyxis alaskensis RB2256 aspartyl/glutamyl-tRNA amidotransferase subunit A YP_615892.1 847208 D 317655 CDS YP_615893.1 103486332 4080050 848780..850255 1 NC_008048.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 850255 gatB 4080050 gatB Sphingopyxis alaskensis RB2256 aspartyl/glutamyl-tRNA amidotransferase subunit B YP_615893.1 848780 D 317655 CDS YP_615894.1 103486333 4080052 850774..852408 1 NC_008048.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 852408 tig 4080052 tig Sphingopyxis alaskensis RB2256 trigger factor YP_615894.1 850774 D 317655 CDS YP_615895.1 103486334 4080053 complement(852556..853173) 1 NC_008048.1 HhH-GPD 853173 4080053 Sala_0844 Sphingopyxis alaskensis RB2256 HhH-GPD YP_615895.1 852556 R 317655 CDS YP_615896.1 103486335 4080054 853274..853591 1 NC_008048.1 ferredoxin 853591 4080054 Sala_0845 Sphingopyxis alaskensis RB2256 ferredoxin YP_615896.1 853274 D 317655 CDS YP_615897.1 103486336 4080055 complement(853625..854443) 1 NC_008048.1 RNA methyltransferase TrmH, group 3 854443 4080055 Sala_0846 Sphingopyxis alaskensis RB2256 RNA methyltransferase TrmH, group 3 YP_615897.1 853625 R 317655 CDS YP_615898.1 103486337 4079983 854753..855964 1 NC_008048.1 phage integrase 855964 4079983 Sala_0847 Sphingopyxis alaskensis RB2256 phage integrase YP_615898.1 854753 D 317655 CDS YP_615899.1 103486338 4079984 complement(855991..856251) 1 NC_008048.1 hypothetical protein 856251 4079984 Sala_0848 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615899.1 855991 R 317655 CDS YP_615900.1 103486339 4079985 complement(856522..857250) 1 NC_008048.1 IstB-like ATP-binding protein 857250 4079985 Sala_0849 Sphingopyxis alaskensis RB2256 IstB-like ATP-binding protein YP_615900.1 856522 R 317655 CDS YP_615901.1 103486340 4079986 complement(857237..858751) 1 NC_008048.1 integrase catalytic subunit 858751 4079986 Sala_0850 Sphingopyxis alaskensis RB2256 integrase catalytic subunit YP_615901.1 857237 R 317655 CDS YP_615902.1 103486341 4079987 858963..859808 1 NC_008048.1 hypothetical protein 859808 4079987 Sala_0851 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615902.1 858963 D 317655 CDS YP_615903.1 103486342 4079988 859857..860654 1 NC_008048.1 enoyl-CoA hydratase/isomerase 860654 4079988 Sala_0852 Sphingopyxis alaskensis RB2256 enoyl-CoA hydratase/isomerase YP_615903.1 859857 D 317655 CDS YP_615904.1 103486343 4079989 860647..861444 1 NC_008048.1 enoyl-CoA hydratase/isomerase 861444 4079989 Sala_0853 Sphingopyxis alaskensis RB2256 enoyl-CoA hydratase/isomerase YP_615904.1 860647 D 317655 CDS YP_615905.1 103486344 4079990 861664..862875 1 NC_008048.1 acyl-CoA dehydrogenase-like protein 862875 4079990 Sala_0854 Sphingopyxis alaskensis RB2256 acyl-CoA dehydrogenase-like protein YP_615905.1 861664 D 317655 CDS YP_615906.1 103486345 4079991 862877..863869 1 NC_008048.1 acyl-CoA dehydrogenase-like protein 863869 4079991 Sala_0855 Sphingopyxis alaskensis RB2256 acyl-CoA dehydrogenase-like protein YP_615906.1 862877 D 317655 CDS YP_615907.1 103486346 4079992 864189..865247 1 NC_008048.1 hypothetical protein 865247 4079992 Sala_0856 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615907.1 864189 D 317655 CDS YP_615908.1 103486347 4079993 865252..866172 1 NC_008048.1 2-nitropropane dioxygenase 866172 4079993 Sala_0857 Sphingopyxis alaskensis RB2256 2-nitropropane dioxygenase YP_615908.1 865252 D 317655 CDS YP_615909.1 103486348 4079994 complement(866169..867167) 1 NC_008048.1 zinc-binding alcohol dehydrogenase 867167 4079994 Sala_0858 Sphingopyxis alaskensis RB2256 zinc-binding alcohol dehydrogenase YP_615909.1 866169 R 317655 CDS YP_615910.1 103486349 4079995 complement(867167..867913) 1 NC_008048.1 short-chain dehydrogenase/reductase SDR 867913 4079995 Sala_0859 Sphingopyxis alaskensis RB2256 short-chain dehydrogenase/reductase SDR YP_615910.1 867167 R 317655 CDS YP_615911.1 103486350 4079996 complement(867910..869205) 1 NC_008048.1 acyl-CoA dehydrogenase-like protein 869205 4079996 Sala_0860 Sphingopyxis alaskensis RB2256 acyl-CoA dehydrogenase-like protein YP_615911.1 867910 R 317655 CDS YP_615912.1 103486351 4079997 complement(869236..870300) 1 NC_008048.1 aminoglycoside phosphotransferase 870300 4079997 Sala_0861 Sphingopyxis alaskensis RB2256 aminoglycoside phosphotransferase YP_615912.1 869236 R 317655 CDS YP_615913.1 103486352 4079998 complement(870297..870755) 1 NC_008048.1 MarR family transcriptional regulator 870755 4079998 Sala_0862 Sphingopyxis alaskensis RB2256 MarR family transcriptional regulator YP_615913.1 870297 R 317655 CDS YP_615914.1 103486353 4079999 complement(870779..871219) 1 NC_008048.1 hypothetical protein 871219 4079999 Sala_0863 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615914.1 870779 R 317655 CDS YP_615915.1 103486354 4080000 complement(871212..872072) 1 NC_008048.1 gluconolactonase 872072 4080000 Sala_0864 Sphingopyxis alaskensis RB2256 gluconolactonase YP_615915.1 871212 R 317655 CDS YP_615916.1 103486355 4080001 872154..873035 1 NC_008048.1 short-chain dehydrogenase/reductase SDR 873035 4080001 Sala_0865 Sphingopyxis alaskensis RB2256 short-chain dehydrogenase/reductase SDR YP_615916.1 872154 D 317655 CDS YP_615917.1 103486356 4082656 873032..873541 1 NC_008048.1 hypothetical protein 873541 4082656 Sala_0866 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615917.1 873032 D 317655 CDS YP_615918.1 103486357 4082657 873534..874394 1 NC_008048.1 short-chain dehydrogenase/reductase SDR 874394 4082657 Sala_0867 Sphingopyxis alaskensis RB2256 short-chain dehydrogenase/reductase SDR YP_615918.1 873534 D 317655 CDS YP_615919.1 103486358 4082658 874496..875272 1 NC_008048.1 regulatory protein GntR 875272 4082658 Sala_0868 Sphingopyxis alaskensis RB2256 regulatory protein GntR YP_615919.1 874496 D 317655 CDS YP_615920.1 103486359 4082659 875269..876780 1 NC_008048.1 AMP-dependent synthetase and ligase 876780 4082659 Sala_0869 Sphingopyxis alaskensis RB2256 AMP-dependent synthetase and ligase YP_615920.1 875269 D 317655 CDS YP_615921.1 103486360 4082660 complement(876798..877586) 1 NC_008048.1 short chain dehydrogenase 877586 4082660 Sala_0870 Sphingopyxis alaskensis RB2256 short chain dehydrogenase YP_615921.1 876798 R 317655 CDS YP_615922.1 103486361 4082661 complement(877589..879073) 1 NC_008048.1 aldehyde dehydrogenase 879073 4082661 Sala_0871 Sphingopyxis alaskensis RB2256 aldehyde dehydrogenase YP_615922.1 877589 R 317655 CDS YP_615923.1 103486362 4082662 complement(879096..880289) 1 NC_008048.1 cytochrome P450 880289 4082662 Sala_0872 Sphingopyxis alaskensis RB2256 cytochrome P450 YP_615923.1 879096 R 317655 CDS YP_615924.1 103486363 4082663 880353..880913 1 NC_008048.1 TetR family transcriptional regulator 880913 4082663 Sala_0873 Sphingopyxis alaskensis RB2256 TetR family transcriptional regulator YP_615924.1 880353 D 317655 CDS YP_615925.1 103486364 4082664 complement(880918..881808) 1 NC_008048.1 acyl-CoA dehydrogenase-like protein 881808 4082664 Sala_0874 Sphingopyxis alaskensis RB2256 acyl-CoA dehydrogenase-like protein YP_615925.1 880918 R 317655 CDS YP_615926.1 103486365 4082665 complement(881813..882964) 1 NC_008048.1 acyl-CoA dehydrogenase-like protein 882964 4082665 Sala_0875 Sphingopyxis alaskensis RB2256 acyl-CoA dehydrogenase-like protein YP_615926.1 881813 R 317655 CDS YP_615927.1 103486366 4082666 complement(882964..883716) 1 NC_008048.1 enoyl-CoA hydratase/isomerase 883716 4082666 Sala_0876 Sphingopyxis alaskensis RB2256 enoyl-CoA hydratase/isomerase YP_615927.1 882964 R 317655 CDS YP_615928.1 103486367 4082667 complement(883713..884624) 1 NC_008048.1 short-chain dehydrogenase/reductase SDR 884624 4082667 Sala_0877 Sphingopyxis alaskensis RB2256 short-chain dehydrogenase/reductase SDR YP_615928.1 883713 R 317655 CDS YP_615929.1 103486368 4082668 complement(884626..885405) 1 NC_008048.1 response regulator receiver protein 885405 4082668 Sala_0878 Sphingopyxis alaskensis RB2256 response regulator receiver protein YP_615929.1 884626 R 317655 CDS YP_615930.1 103486369 4082669 885494..885907 1 NC_008048.1 hypothetical protein 885907 4082669 Sala_0879 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615930.1 885494 D 317655 CDS YP_615931.1 103486370 4082670 885904..886665 1 NC_008048.1 short-chain dehydrogenase/reductase SDR 886665 4082670 Sala_0880 Sphingopyxis alaskensis RB2256 short-chain dehydrogenase/reductase SDR YP_615931.1 885904 D 317655 CDS YP_615932.1 103486371 4082671 886665..888164 1 NC_008048.1 AMP-dependent synthetase and ligase 888164 4082671 Sala_0881 Sphingopyxis alaskensis RB2256 AMP-dependent synthetase and ligase YP_615932.1 886665 D 317655 CDS YP_615933.1 103486372 4082672 888161..888982 1 NC_008048.1 short-chain dehydrogenase/reductase SDR 888982 4082672 Sala_0882 Sphingopyxis alaskensis RB2256 short-chain dehydrogenase/reductase SDR YP_615933.1 888161 D 317655 CDS YP_615934.1 103486373 4082673 888982..889776 1 NC_008048.1 short-chain dehydrogenase/reductase SDR 889776 4082673 Sala_0883 Sphingopyxis alaskensis RB2256 short-chain dehydrogenase/reductase SDR YP_615934.1 888982 D 317655 CDS YP_615935.1 103486374 4082674 889801..890595 1 NC_008048.1 short-chain dehydrogenase/reductase SDR 890595 4082674 Sala_0884 Sphingopyxis alaskensis RB2256 short-chain dehydrogenase/reductase SDR YP_615935.1 889801 D 317655 CDS YP_615936.1 103486375 4082785 890605..891621 1 NC_008048.1 hypothetical protein 891621 4082785 Sala_0885 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615936.1 890605 D 317655 CDS YP_615937.1 103486376 4082786 891742..894162 1 NC_008048.1 TonB-dependent receptor 894162 4082786 Sala_0886 Sphingopyxis alaskensis RB2256 TonB-dependent receptor YP_615937.1 891742 D 317655 CDS YP_615938.1 103486377 4082787 894248..895498 1 NC_008048.1 major facilitator superfamily transporter 895498 4082787 Sala_0887 Sphingopyxis alaskensis RB2256 major facilitator superfamily transporter YP_615938.1 894248 D 317655 CDS YP_615939.1 103486378 4082788 complement(895533..896651) 1 NC_008048.1 amidohydrolase 2 896651 4082788 Sala_0888 Sphingopyxis alaskensis RB2256 amidohydrolase 2 YP_615939.1 895533 R 317655 CDS YP_615940.1 103486379 4082789 896772..897488 1 NC_008048.1 regulatory protein GntR 897488 4082789 Sala_0889 Sphingopyxis alaskensis RB2256 regulatory protein GntR YP_615940.1 896772 D 317655 CDS YP_615941.1 103486380 4082790 897485..898711 1 NC_008048.1 flavin reductase-like, FMN-binding 898711 4082790 Sala_0890 Sphingopyxis alaskensis RB2256 flavin reductase-like, FMN-binding YP_615941.1 897485 D 317655 CDS YP_615942.1 103486381 4082791 898775..899992 1 NC_008048.1 related to DitF possibly involved in diterpenoid metabolism; thiolase 899992 4082791 Sala_0891 Sphingopyxis alaskensis RB2256 thiolase YP_615942.1 898775 D 317655 CDS YP_615943.1 103486382 4082792 899994..900422 1 NC_008048.1 hypothetical protein 900422 4082792 Sala_0892 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615943.1 899994 D 317655 CDS YP_615944.1 103486383 4082793 900466..902634 1 NC_008048.1 acyl-CoA transferase/carnitine dehydratase-like protein 902634 4082793 Sala_0893 Sphingopyxis alaskensis RB2256 acyl-CoA transferase/carnitine dehydratase-like protein YP_615944.1 900466 D 317655 CDS YP_615945.1 103486384 4082794 902631..904010 1 NC_008048.1 aminoglycoside phosphotransferase 904010 4082794 Sala_0894 Sphingopyxis alaskensis RB2256 aminoglycoside phosphotransferase YP_615945.1 902631 D 317655 CDS YP_615946.1 103486385 4082795 904119..904943 1 NC_008048.1 catalyzes the formation of 5-alpha-androstane-3,17-dione from androsterone; Acts on other 3-alpha-hydroxysteroids and on 9-, 11- and 15-hydroxyprostaglandin.; 3-alpha-hydroxysteroid dehydrogenase 904943 4082795 Sala_0895 Sphingopyxis alaskensis RB2256 3-alpha-hydroxysteroid dehydrogenase YP_615946.1 904119 D 317655 CDS YP_615947.1 103486386 4082796 complement(904966..905622) 1 NC_008048.1 TetR family transcriptional regulator 905622 4082796 Sala_0896 Sphingopyxis alaskensis RB2256 TetR family transcriptional regulator YP_615947.1 904966 R 317655 CDS YP_615948.1 103486387 4082797 905739..906521 1 NC_008048.1 short-chain dehydrogenase/reductase SDR 906521 4082797 Sala_0897 Sphingopyxis alaskensis RB2256 short-chain dehydrogenase/reductase SDR YP_615948.1 905739 D 317655 CDS YP_615949.1 103486388 4082798 906523..907917 1 NC_008048.1 major facilitator superfamily transporter 907917 4082798 Sala_0898 Sphingopyxis alaskensis RB2256 major facilitator superfamily transporter YP_615949.1 906523 D 317655 CDS YP_615950.1 103486389 4082799 907914..908309 1 NC_008048.1 hypothetical protein 908309 4082799 Sala_0899 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615950.1 907914 D 317655 CDS YP_615951.1 103486390 4082800 908306..909475 1 NC_008048.1 hypothetical protein 909475 4082800 Sala_0900 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615951.1 908306 D 317655 CDS YP_615952.1 103486391 4082801 complement(909548..910780) 1 NC_008048.1 L-carnitine dehydratase/bile acid-inducible protein F 910780 4082801 Sala_0901 Sphingopyxis alaskensis RB2256 L-carnitine dehydratase/bile acid-inducible protein F YP_615952.1 909548 R 317655 CDS YP_615953.1 103486392 4082802 complement(910795..912270) 1 NC_008048.1 betaine aldehyde dehydrogenase 912270 4082802 Sala_0902 Sphingopyxis alaskensis RB2256 betaine aldehyde dehydrogenase YP_615953.1 910795 R 317655 CDS YP_615954.1 103486393 4082803 complement(912284..913561) 1 NC_008048.1 cytochrome P450 913561 4082803 Sala_0903 Sphingopyxis alaskensis RB2256 cytochrome P450 YP_615954.1 912284 R 317655 CDS YP_615955.1 103486394 4082804 complement(913565..914878) 1 NC_008048.1 amidohydrolase 2 914878 4082804 Sala_0904 Sphingopyxis alaskensis RB2256 amidohydrolase 2 YP_615955.1 913565 R 317655 CDS YP_615956.1 103486395 4083115 914982..915389 1 NC_008048.1 hypothetical protein 915389 4083115 Sala_0905 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615956.1 914982 D 317655 CDS YP_615957.1 103486396 4083116 915386..916570 1 NC_008048.1 hypothetical protein 916570 4083116 Sala_0906 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615957.1 915386 D 317655 CDS YP_615958.1 103486397 4083117 complement(916574..917908) 1 NC_008048.1 amidohydrolase 3 917908 4083117 Sala_0907 Sphingopyxis alaskensis RB2256 amidohydrolase 3 YP_615958.1 916574 R 317655 CDS YP_615959.1 103486398 4083118 complement(917908..918873) 1 NC_008048.1 hypothetical protein 918873 4083118 Sala_0908 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615959.1 917908 R 317655 CDS YP_615960.1 103486399 4083119 complement(918870..919853) 1 NC_008048.1 enoyl-CoA hydratase/isomerase 919853 4083119 Sala_0909 Sphingopyxis alaskensis RB2256 enoyl-CoA hydratase/isomerase YP_615960.1 918870 R 317655 CDS YP_615961.1 103486400 4083120 complement(919864..921369) 1 NC_008048.1 AMP-dependent synthetase and ligase 921369 4083120 Sala_0910 Sphingopyxis alaskensis RB2256 AMP-dependent synthetase and ligase YP_615961.1 919864 R 317655 CDS YP_615962.1 103486401 4083121 complement(921375..921683) 1 NC_008048.1 hypothetical protein 921683 4083121 Sala_0911 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615962.1 921375 R 317655 CDS YP_615963.1 103486402 4083122 921799..923346 1 NC_008048.1 AMP-dependent synthetase and ligase 923346 4083122 Sala_0912 Sphingopyxis alaskensis RB2256 AMP-dependent synthetase and ligase YP_615963.1 921799 D 317655 CDS YP_615964.1 103486403 4083123 923377..923934 1 NC_008048.1 hypothetical protein 923934 4083123 Sala_0913 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615964.1 923377 D 317655 CDS YP_615965.1 103486404 4083124 923955..926918 1 NC_008048.1 TonB-dependent receptor 926918 4083124 Sala_0914 Sphingopyxis alaskensis RB2256 TonB-dependent receptor YP_615965.1 923955 D 317655 CDS YP_615966.1 103486405 4083125 927028..928545 1 NC_008048.1 tryptophan halogenase 928545 4083125 Sala_0915 Sphingopyxis alaskensis RB2256 tryptophan halogenase YP_615966.1 927028 D 317655 CDS YP_615967.1 103486406 4083126 928566..929282 1 NC_008048.1 protein SapC protein 929282 4083126 Sala_0916 Sphingopyxis alaskensis RB2256 protein SapC protein YP_615967.1 928566 D 317655 CDS YP_615968.1 103486407 4083127 929329..930300 1 NC_008048.1 PASs1-related protein 930300 4083127 Sala_0917 Sphingopyxis alaskensis RB2256 PASs1-related protein YP_615968.1 929329 D 317655 CDS YP_615969.1 103486408 4083128 930297..931808 1 NC_008048.1 tryptophan halogenase 931808 4083128 Sala_0918 Sphingopyxis alaskensis RB2256 tryptophan halogenase YP_615969.1 930297 D 317655 CDS YP_615970.1 103486409 4083129 931805..932752 1 NC_008048.1 glucan endo-1,3-beta-D-glucosidase 932752 4083129 Sala_0919 Sphingopyxis alaskensis RB2256 glucan endo-1,3-beta-D-glucosidase YP_615970.1 931805 D 317655 CDS YP_615971.1 103486410 4083130 932756..933811 1 NC_008048.1 LacI family transcriptional regulator 933811 4083130 Sala_0920 Sphingopyxis alaskensis RB2256 LacI family transcriptional regulator YP_615971.1 932756 D 317655 CDS YP_615972.1 103486411 4083131 933804..935012 1 NC_008048.1 major facilitator superfamily transporter 935012 4083131 Sala_0921 Sphingopyxis alaskensis RB2256 major facilitator superfamily transporter YP_615972.1 933804 D 317655 CDS YP_615973.1 103486412 4083132 complement(935126..936097) 1 NC_008048.1 2-nitropropane dioxygenase 936097 4083132 Sala_0922 Sphingopyxis alaskensis RB2256 2-nitropropane dioxygenase YP_615973.1 935126 R 317655 CDS YP_615974.1 103486413 4083133 complement(936265..937488) 1 NC_008048.1 amidohydrolase 937488 4083133 Sala_0923 Sphingopyxis alaskensis RB2256 amidohydrolase YP_615974.1 936265 R 317655 CDS YP_615975.1 103486414 4080477 complement(937479..938513) 1 NC_008048.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 938513 pyrB 4080477 pyrB Sphingopyxis alaskensis RB2256 aspartate carbamoyltransferase catalytic subunit YP_615975.1 937479 R 317655 CDS YP_615976.1 103486415 4080478 complement(938653..939111) 1 NC_008048.1 Holliday junction resolvase YqgF 939111 4080478 Sala_0925 Sphingopyxis alaskensis RB2256 Holliday junction resolvase YqgF YP_615976.1 938653 R 317655 CDS YP_615977.1 103486416 4080479 complement(939137..942040) 1 NC_008048.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A 942040 uvrA 4080479 uvrA Sphingopyxis alaskensis RB2256 excinuclease ABC subunit A YP_615977.1 939137 R 317655 CDS YP_615978.1 103486417 4080480 complement(942145..943695) 1 NC_008048.1 BCCT transporter 943695 4080480 Sala_0927 Sphingopyxis alaskensis RB2256 BCCT transporter YP_615978.1 942145 R 317655 CDS YP_615979.1 103486418 4080481 943713..944207 1 NC_008048.1 hypothetical protein 944207 4080481 Sala_0928 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615979.1 943713 D 317655 CDS YP_615980.1 103486419 4080482 944932..945291 1 NC_008048.1 hypothetical protein 945291 4080482 Sala_0929 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615980.1 944932 D 317655 CDS YP_615981.1 103486420 4080483 complement(945354..946085) 1 NC_008048.1 response regulator receiver protein 946085 4080483 Sala_0930 Sphingopyxis alaskensis RB2256 response regulator receiver protein YP_615981.1 945354 R 317655 CDS YP_615982.1 103486421 4080484 complement(946085..947257) 1 NC_008048.1 signal transduction histidine kinase LytS 947257 4080484 Sala_0931 Sphingopyxis alaskensis RB2256 signal transduction histidine kinase LytS YP_615982.1 946085 R 317655 CDS YP_615983.1 103486422 4080485 complement(947359..950154) 1 NC_008048.1 valyl-tRNA synthetase 950154 4080485 Sala_0932 Sphingopyxis alaskensis RB2256 valyl-tRNA synthetase YP_615983.1 947359 R 317655 CDS YP_615984.1 103486423 4080486 complement(950317..952323) 1 NC_008048.1 peptidase S9, prolyl oligopeptidase active site region 952323 4080486 Sala_0933 Sphingopyxis alaskensis RB2256 peptidase S9, prolyl oligopeptidase active site region YP_615984.1 950317 R 317655 CDS YP_615985.1 103486424 4080487 952461..953051 1 NC_008048.1 type IV pilus assembly PilZ 953051 4080487 Sala_0934 Sphingopyxis alaskensis RB2256 type IV pilus assembly PilZ YP_615985.1 952461 D 317655 CDS YP_615986.1 103486425 4080488 complement(953089..954375) 1 NC_008048.1 amidohydrolase 954375 4080488 Sala_0935 Sphingopyxis alaskensis RB2256 amidohydrolase YP_615986.1 953089 R 317655 CDS YP_615987.1 103486426 4080489 complement(954348..955256) 1 NC_008048.1 zinc metallopeptidase 955256 4080489 Sala_0936 Sphingopyxis alaskensis RB2256 zinc metallopeptidase YP_615987.1 954348 R 317655 CDS YP_615988.1 103486427 4080490 955581..956738 1 NC_008048.1 patatin 956738 4080490 Sala_0937 Sphingopyxis alaskensis RB2256 patatin YP_615988.1 955581 D 317655 CDS YP_615989.1 103486428 4080491 956765..957550 1 NC_008048.1 3-hydroxybutyrate dehydrogenase 957550 4080491 Sala_0938 Sphingopyxis alaskensis RB2256 3-hydroxybutyrate dehydrogenase YP_615989.1 956765 D 317655 CDS YP_615990.1 103486429 4080492 957623..958267 1 NC_008048.1 hypothetical protein 958267 4080492 Sala_0939 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615990.1 957623 D 317655 CDS YP_615991.1 103486430 4080493 958282..959598 1 NC_008048.1 peptidase M20D, amidohydrolase 959598 4080493 Sala_0940 Sphingopyxis alaskensis RB2256 peptidase M20D, amidohydrolase YP_615991.1 958282 D 317655 CDS YP_615992.1 103486431 4080494 complement(959681..960454) 1 NC_008048.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 960454 4080494 Sala_0941 Sphingopyxis alaskensis RB2256 enoyl-CoA hydratase YP_615992.1 959681 R 317655 CDS YP_615993.1 103486432 4080495 960946..961932 1 NC_008048.1 integral membrane protein TerC 961932 4080495 Sala_0942 Sphingopyxis alaskensis RB2256 integral membrane protein TerC YP_615993.1 960946 D 317655 CDS YP_615994.1 103486433 4080496 complement(962080..963672) 1 NC_008048.1 Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates; isocitrate lyase 963672 4080496 Sala_0943 Sphingopyxis alaskensis RB2256 isocitrate lyase YP_615994.1 962080 R 317655 CDS YP_615995.1 103486434 4082443 963812..965200 1 NC_008048.1 XRE family transcriptional regulator 965200 4082443 Sala_0944 Sphingopyxis alaskensis RB2256 XRE family transcriptional regulator YP_615995.1 963812 D 317655 CDS YP_615996.1 103486435 4082444 complement(965238..966263) 1 NC_008048.1 hypothetical protein 966263 4082444 Sala_0945 Sphingopyxis alaskensis RB2256 hypothetical protein YP_615996.1 965238 R 317655 CDS YP_615997.1 103486436 4082445 complement(966467..967975) 1 NC_008048.1 PepSY-associated TM helix family protein 967975 4082445 Sala_0946 Sphingopyxis alaskensis RB2256 PepSY-associated TM helix family protein YP_615997.1 966467 R 317655 CDS YP_615998.1 103486437 4082446 complement(968400..970451) 1 NC_008048.1 TonB-dependent siderophore receptor 970451 4082446 Sala_0947 Sphingopyxis alaskensis RB2256 TonB-dependent siderophore receptor YP_615998.1 968400 R 317655 CDS YP_615999.1 103486438 4082447 970619..972007 1 NC_008048.1 undecaprenyl-phosphate galactosephosphotransferase 972007 4082447 Sala_0948 Sphingopyxis alaskensis RB2256 undecaprenyl-phosphate galactosephosphotransferase YP_615999.1 970619 D 317655 CDS YP_616000.1 103486439 4082448 972009..974129 1 NC_008048.1 sensor signal transduction histidine kinase 974129 4082448 Sala_0949 Sphingopyxis alaskensis RB2256 sensor signal transduction histidine kinase YP_616000.1 972009 D 317655 CDS YP_616001.1 103486440 4082449 974126..975502 1 NC_008048.1 two component, sigma54 specific, Fis family transcriptional regulator 975502 4082449 Sala_0950 Sphingopyxis alaskensis RB2256 two component, sigma54 specific, Fis family transcriptional regulator YP_616001.1 974126 D 317655 CDS YP_616002.1 103486441 4082450 975503..977344 1 NC_008048.1 hypothetical protein 977344 4082450 Sala_0951 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616002.1 975503 D 317655 CDS YP_616003.1 103486442 4082451 complement(977505..977852) 1 NC_008048.1 GntR family transcriptional regulator 977852 4082451 Sala_0952 Sphingopyxis alaskensis RB2256 GntR family transcriptional regulator YP_616003.1 977505 R 317655 CDS YP_616004.1 103486443 4082452 complement(977924..978505) 1 NC_008048.1 nitroreductase 978505 4082452 Sala_0953 Sphingopyxis alaskensis RB2256 nitroreductase YP_616004.1 977924 R 317655 CDS YP_616005.1 103486444 4082453 978688..980271 1 NC_008048.1 amino acid/peptide transporter 980271 4082453 Sala_0954 Sphingopyxis alaskensis RB2256 amino acid/peptide transporter YP_616005.1 978688 D 317655 CDS YP_616006.1 103486445 4082454 980275..981687 1 NC_008048.1 amidohydrolase 981687 4082454 Sala_0955 Sphingopyxis alaskensis RB2256 amidohydrolase YP_616006.1 980275 D 317655 CDS YP_616007.1 103486446 4082455 981825..983090 1 NC_008048.1 hypothetical protein 983090 4082455 Sala_0956 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616007.1 981825 D 317655 CDS YP_616008.1 103486447 4082456 983333..984034 1 NC_008048.1 protein NnrU 984034 4082456 Sala_0957 Sphingopyxis alaskensis RB2256 protein NnrU YP_616008.1 983333 D 317655 CDS YP_616009.1 103486448 4082457 complement(984054..985049) 1 NC_008048.1 aldo/keto reductase 985049 4082457 Sala_0958 Sphingopyxis alaskensis RB2256 aldo/keto reductase YP_616009.1 984054 R 317655 CDS YP_616010.1 103486449 4082458 complement(985046..986293) 1 NC_008048.1 sodium:dicarboxylate symporter 986293 4082458 Sala_0959 Sphingopyxis alaskensis RB2256 sodium:dicarboxylate symporter YP_616010.1 985046 R 317655 CDS YP_616011.1 103486450 4082459 986460..987794 1 NC_008048.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 987794 glmM 4082459 glmM Sphingopyxis alaskensis RB2256 phosphoglucosamine mutase YP_616011.1 986460 D 317655 CDS YP_616012.1 103486451 4082460 987824..988057 1 NC_008048.1 hypothetical protein 988057 4082460 Sala_0961 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616012.1 987824 D 317655 CDS YP_616013.1 103486452 4082461 988058..989206 1 NC_008048.1 phosphomethylpyrimidine kinase 989206 4082461 Sala_0962 Sphingopyxis alaskensis RB2256 phosphomethylpyrimidine kinase YP_616013.1 988058 D 317655 CDS YP_616014.1 103486453 4079963 989301..989897 1 NC_008048.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 989897 rnhB 4079963 rnhB Sphingopyxis alaskensis RB2256 ribonuclease HII YP_616014.1 989301 D 317655 CDS YP_616015.1 103486454 4079964 989925..990821 1 NC_008048.1 short-chain dehydrogenase/reductase SDR 990821 4079964 Sala_0964 Sphingopyxis alaskensis RB2256 short-chain dehydrogenase/reductase SDR YP_616015.1 989925 D 317655 CDS YP_616016.1 103486455 4079965 991065..992204 1 NC_008048.1 DNA methylase N-4/N-6 992204 4079965 Sala_0965 Sphingopyxis alaskensis RB2256 DNA methylase N-4/N-6 YP_616016.1 991065 D 317655 CDS YP_616017.1 103486456 4079966 992319..993449 1 NC_008048.1 dihydropteroate synthase 993449 4079966 Sala_0966 Sphingopyxis alaskensis RB2256 dihydropteroate synthase YP_616017.1 992319 D 317655 CDS YP_616018.1 103486457 4079967 complement(993446..993781) 1 NC_008048.1 ArsR family transcriptional regulator 993781 4079967 Sala_0967 Sphingopyxis alaskensis RB2256 ArsR family transcriptional regulator YP_616018.1 993446 R 317655 CDS YP_616019.1 103486458 4079968 complement(993781..994434) 1 NC_008048.1 hypothetical protein 994434 4079968 Sala_0968 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616019.1 993781 R 317655 CDS YP_616020.1 103486459 4079969 complement(994533..995996) 1 NC_008048.1 two component, sigma54 specific, Fis family transcriptional regulator 995996 4079969 Sala_0969 Sphingopyxis alaskensis RB2256 two component, sigma54 specific, Fis family transcriptional regulator YP_616020.1 994533 R 317655 CDS YP_616021.1 103486460 4079970 996335..997456 1 NC_008048.1 alanine dehydrogenase/PNT-like protein 997456 4079970 Sala_0971 Sphingopyxis alaskensis RB2256 alanine dehydrogenase/PNT-like protein YP_616021.1 996335 D 317655 CDS YP_616022.1 103486461 4079971 997463..997828 1 NC_008048.1 hypothetical protein 997828 4079971 Sala_0972 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616022.1 997463 D 317655 CDS YP_616023.1 103486462 4079972 997927..998535 1 NC_008048.1 beta-Ig-H3/fasciclin 998535 4079972 Sala_0973 Sphingopyxis alaskensis RB2256 beta-Ig-H3/fasciclin YP_616023.1 997927 D 317655 CDS YP_616024.1 103486463 4079973 complement(998579..1000243) 1 NC_008048.1 2-isopropylmalate synthase 1000243 4079973 Sala_0974 Sphingopyxis alaskensis RB2256 2-isopropylmalate synthase YP_616024.1 998579 R 317655 CDS YP_616025.1 103486464 4079974 complement(1000240..1000611) 1 NC_008048.1 hypothetical protein 1000611 4079974 Sala_0975 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616025.1 1000240 R 317655 CDS YP_616026.1 103486465 4079975 complement(1000692..1001333) 1 NC_008048.1 YceI protein 1001333 4079975 Sala_0976 Sphingopyxis alaskensis RB2256 YceI protein YP_616026.1 1000692 R 317655 CDS YP_616027.1 103486466 4079976 complement(1001562..1002233) 1 NC_008048.1 hypothetical protein 1002233 4079976 Sala_0977 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616027.1 1001562 R 317655 CDS YP_616028.1 103486467 4079977 complement(1002509..1002805) 1 NC_008048.1 hypothetical protein 1002805 4079977 Sala_0978 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616028.1 1002509 R 317655 CDS YP_616029.1 103486468 4079978 complement(1003132..1005141) 1 NC_008048.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD 1005141 4079978 Sala_0979 Sphingopyxis alaskensis RB2256 RNA polymerase sigma factor RpoD YP_616029.1 1003132 R 317655 CDS YP_616030.1 103486469 4079979 complement(1005177..1007054) 1 NC_008048.1 DNA primase 1007054 4079979 Sala_0980 Sphingopyxis alaskensis RB2256 DNA primase YP_616030.1 1005177 R 317655 CDS YP_616031.1 103486470 4079980 complement(1007051..1007464) 1 NC_008048.1 excinuclease ABC subunit C 1007464 4079980 Sala_0981 Sphingopyxis alaskensis RB2256 excinuclease ABC subunit C YP_616031.1 1007051 R 317655 CDS YP_616032.1 103486471 4079981 complement(1007587..1008039) 1 NC_008048.1 hypothetical protein 1008039 4079981 Sala_0982 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616032.1 1007587 R 317655 CDS YP_616033.1 103486472 4079982 1008171..1009442 1 NC_008048.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 1009442 4079982 Sala_0983 Sphingopyxis alaskensis RB2256 carbamoyl phosphate synthase small subunit YP_616033.1 1008171 D 317655 CDS YP_616034.1 103486473 4081672 1009442..1009906 1 NC_008048.1 hypothetical protein 1009906 4081672 Sala_0984 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616034.1 1009442 D 317655 CDS YP_616035.1 103486474 4081673 1009907..1013227 1 NC_008048.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 1013227 carB 4081673 carB Sphingopyxis alaskensis RB2256 carbamoyl phosphate synthase large subunit YP_616035.1 1009907 D 317655 CDS YP_616036.1 103486475 4081674 1013324..1013800 1 NC_008048.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 1013800 greA 4081674 greA Sphingopyxis alaskensis RB2256 transcription elongation factor GreA YP_616036.1 1013324 D 317655 CDS YP_616037.1 103486476 4081675 1013814..1014449 1 NC_008048.1 rhomboid-like protein 1014449 4081675 Sala_0987 Sphingopyxis alaskensis RB2256 rhomboid-like protein YP_616037.1 1013814 D 317655 CDS YP_616038.1 103486477 4081676 complement(1014542..1015090) 1 NC_008048.1 NUDIX hydrolase 1015090 4081676 Sala_0988 Sphingopyxis alaskensis RB2256 NUDIX hydrolase YP_616038.1 1014542 R 317655 CDS YP_616039.1 103486478 4081677 complement(1015092..1015778) 1 NC_008048.1 hypothetical protein 1015778 4081677 Sala_0989 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616039.1 1015092 R 317655 CDS YP_616040.1 103486479 4081678 complement(1015790..1016635) 1 NC_008048.1 hypothetical protein 1016635 4081678 Sala_0990 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616040.1 1015790 R 317655 CDS YP_616041.1 103486480 4081679 complement(1016637..1017239) 1 NC_008048.1 hypothetical protein 1017239 4081679 Sala_0991 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616041.1 1016637 R 317655 CDS YP_616042.1 103486481 4081680 1017357..1017779 1 NC_008048.1 homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel 1017779 mscL 4081680 mscL Sphingopyxis alaskensis RB2256 large-conductance mechanosensitive channel YP_616042.1 1017357 D 317655 CDS YP_616043.1 103486482 4081681 complement(1018327..1018740) 1 NC_008048.1 MerR family transcriptional regulator 1018740 4081681 Sala_0993 Sphingopyxis alaskensis RB2256 MerR family transcriptional regulator YP_616043.1 1018327 R 317655 CDS YP_616044.1 103486483 4081682 1018809..1019432 1 NC_008048.1 Co/Zn/Cd efflux system protein 1019432 4081682 Sala_0994 Sphingopyxis alaskensis RB2256 Co/Zn/Cd efflux system protein YP_616044.1 1018809 D 317655 CDS YP_616045.1 103486484 4081683 1019446..1019937 1 NC_008048.1 glyoxalase/bleomycin resistance protein/dioxygenase 1019937 4081683 Sala_0995 Sphingopyxis alaskensis RB2256 glyoxalase/bleomycin resistance protein/dioxygenase YP_616045.1 1019446 D 317655 CDS YP_616046.1 103486485 4081684 complement(1019934..1020185) 1 NC_008048.1 hypothetical protein 1020185 4081684 Sala_0996 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616046.1 1019934 R 317655 CDS YP_616047.1 103486486 4081685 complement(1020341..1020895) 1 NC_008048.1 beta-Ig-H3/fasciclin 1020895 4081685 Sala_0997 Sphingopyxis alaskensis RB2256 beta-Ig-H3/fasciclin YP_616047.1 1020341 R 317655 CDS YP_616048.1 103486487 4081686 complement(1020991..1022364) 1 NC_008048.1 deoxyribodipyrimidine photolyase 1022364 4081686 Sala_0998 Sphingopyxis alaskensis RB2256 deoxyribodipyrimidine photolyase YP_616048.1 1020991 R 317655 CDS YP_616049.1 103486488 4081687 complement(1022361..1023323) 1 NC_008048.1 hypothetical protein 1023323 4081687 Sala_0999 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616049.1 1022361 R 317655 CDS YP_616050.1 103486489 4081688 1023510..1024097 1 NC_008048.1 LuxR family transcriptional regulator 1024097 4081688 Sala_1000 Sphingopyxis alaskensis RB2256 LuxR family transcriptional regulator YP_616050.1 1023510 D 317655 CDS YP_616051.1 103486490 4081689 complement(1024300..1025082) 1 NC_008048.1 ABC transporter 1025082 4081689 Sala_1001 Sphingopyxis alaskensis RB2256 ABC transporter YP_616051.1 1024300 R 317655 CDS YP_616052.1 103486491 4081690 complement(1025076..1026077) 1 NC_008048.1 transport system permease 1026077 4081690 Sala_1002 Sphingopyxis alaskensis RB2256 transport system permease YP_616052.1 1025076 R 317655 CDS YP_616053.1 103486492 4081691 complement(1026074..1026931) 1 NC_008048.1 periplasmic binding protein 1026931 4081691 Sala_1003 Sphingopyxis alaskensis RB2256 periplasmic binding protein YP_616053.1 1026074 R 317655 CDS YP_616054.1 103486493 4081692 complement(1026974..1028830) 1 NC_008048.1 TonB-dependent receptor 1028830 4081692 Sala_1004 Sphingopyxis alaskensis RB2256 TonB-dependent receptor YP_616054.1 1026974 R 317655 CDS YP_616055.1 103486494 4081693 complement(1029325..1030485) 1 NC_008048.1 Acetyl-CoA C-acyltransferase 1030485 4081693 Sala_1005 Sphingopyxis alaskensis RB2256 Acetyl-CoA C-acyltransferase YP_616055.1 1029325 R 317655 CDS YP_616056.1 103486495 4081694 complement(1030487..1031716) 1 NC_008048.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 1031716 4081694 Sala_1006 Sphingopyxis alaskensis RB2256 acetyl-CoA acetyltransferase YP_616056.1 1030487 R 317655 CDS YP_616057.1 103486496 4081695 complement(1031852..1033567) 1 NC_008048.1 AMP-dependent synthetase and ligase 1033567 4081695 Sala_1007 Sphingopyxis alaskensis RB2256 AMP-dependent synthetase and ligase YP_616057.1 1031852 R 317655 CDS YP_616058.1 103486497 4081696 complement(1033569..1035065) 1 NC_008048.1 carotenoid oxygenase 1035065 4081696 Sala_1008 Sphingopyxis alaskensis RB2256 carotenoid oxygenase YP_616058.1 1033569 R 317655 CDS YP_616059.1 103486498 4081697 complement(1035062..1036030) 1 NC_008048.1 2-nitropropane dioxygenase 1036030 4081697 Sala_1009 Sphingopyxis alaskensis RB2256 2-nitropropane dioxygenase YP_616059.1 1035062 R 317655 CDS YP_616060.1 103486499 4081698 1036125..1038434 1 NC_008048.1 TonB-dependent receptor 1038434 4081698 Sala_1010 Sphingopyxis alaskensis RB2256 TonB-dependent receptor YP_616060.1 1036125 D 317655 CDS YP_616061.1 103486500 4081699 1038520..1039452 1 NC_008048.1 HxlR family transcriptional regulator 1039452 4081699 Sala_1011 Sphingopyxis alaskensis RB2256 HxlR family transcriptional regulator YP_616061.1 1038520 D 317655 CDS YP_616062.1 103486501 4081700 complement(1039457..1040686) 1 NC_008048.1 hypothetical protein 1040686 4081700 Sala_1012 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616062.1 1039457 R 317655 CDS YP_616063.1 103486502 4081701 complement(1040727..1042274) 1 NC_008048.1 sulfatase 1042274 4081701 Sala_1013 Sphingopyxis alaskensis RB2256 sulfatase YP_616063.1 1040727 R 317655 CDS YP_616064.1 103486503 4081702 complement(1042291..1044609) 1 NC_008048.1 glycoside hydrolase 1044609 4081702 Sala_1014 Sphingopyxis alaskensis RB2256 glycoside hydrolase YP_616064.1 1042291 R 317655 CDS YP_616065.1 103486504 4081703 1044845..1047895 1 NC_008048.1 TonB-dependent receptor 1047895 4081703 Sala_1015 Sphingopyxis alaskensis RB2256 TonB-dependent receptor YP_616065.1 1044845 D 317655 CDS YP_616066.1 103486505 4081704 1047965..1049482 1 NC_008048.1 hypothetical protein 1049482 4081704 Sala_1016 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616066.1 1047965 D 317655 CDS YP_616067.1 103486506 4081705 complement(1049490..1051643) 1 NC_008048.1 beta-galactosidase 1051643 4081705 Sala_1017 Sphingopyxis alaskensis RB2256 beta-galactosidase YP_616067.1 1049490 R 317655 CDS YP_616068.1 103486507 4081706 complement(1051646..1052515) 1 NC_008048.1 endonuclease/exonuclease/phosphatase 1052515 4081706 Sala_1018 Sphingopyxis alaskensis RB2256 endonuclease/exonuclease/phosphatase YP_616068.1 1051646 R 317655 CDS YP_616069.1 103486508 4081707 complement(1052515..1053861) 1 NC_008048.1 Beta-glucosidase 1053861 4081707 Sala_1019 Sphingopyxis alaskensis RB2256 Beta-glucosidase YP_616069.1 1052515 R 317655 CDS YP_616070.1 103486509 4081708 complement(1053858..1054640) 1 NC_008048.1 hypothetical protein 1054640 4081708 Sala_1020 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616070.1 1053858 R 317655 CDS YP_616071.1 103486510 4081709 complement(1054637..1055377) 1 NC_008048.1 binding-protein-dependent transport system inner membrane protein 1055377 4081709 Sala_1021 Sphingopyxis alaskensis RB2256 binding-protein-dependent transport system inner membrane protein YP_616071.1 1054637 R 317655 CDS YP_616072.1 103486511 4081710 complement(1055449..1056333) 1 NC_008048.1 binding-protein-dependent transport system inner membrane protein 1056333 4081710 Sala_1022 Sphingopyxis alaskensis RB2256 binding-protein-dependent transport system inner membrane protein YP_616072.1 1055449 R 317655 CDS YP_616073.1 103486512 4082306 complement(1056342..1057610) 1 NC_008048.1 extracellular solute-binding protein 1057610 4082306 Sala_1023 Sphingopyxis alaskensis RB2256 extracellular solute-binding protein YP_616073.1 1056342 R 317655 CDS YP_616074.1 103486513 4082307 complement(1057627..1058655) 1 NC_008048.1 LacI family transcriptional regulator 1058655 4082307 Sala_1024 Sphingopyxis alaskensis RB2256 LacI family transcriptional regulator YP_616074.1 1057627 R 317655 CDS YP_616075.1 103486514 4082308 complement(1058768..1059856) 1 NC_008048.1 ABC transporter 1059856 4082308 Sala_1025 Sphingopyxis alaskensis RB2256 ABC transporter YP_616075.1 1058768 R 317655 CDS YP_616076.1 103486515 4082309 complement(1059882..1060145) 1 NC_008048.1 hypothetical protein 1060145 4082309 Sala_1026 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616076.1 1059882 R 317655 CDS YP_616077.1 103486516 4082310 1060403..1061860 1 NC_008048.1 inosine-5'-monophosphate dehydrogenase 1061860 4082310 Sala_1027 Sphingopyxis alaskensis RB2256 inosine-5'-monophosphate dehydrogenase YP_616077.1 1060403 D 317655 CDS YP_616078.1 103486517 4082311 1062032..1063222 1 NC_008048.1 hypothetical protein 1063222 4082311 Sala_1028 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616078.1 1062032 D 317655 CDS YP_616079.1 103486518 4082312 1063255..1063785 1 NC_008048.1 hypothetical protein 1063785 4082312 Sala_1029 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616079.1 1063255 D 317655 CDS YP_616080.1 103486519 4082313 complement(1064200..1065183) 1 NC_008048.1 peptidyl-arginine deiminase 1065183 4082313 Sala_1030 Sphingopyxis alaskensis RB2256 peptidyl-arginine deiminase YP_616080.1 1064200 R 317655 CDS YP_616081.1 103486520 4082314 complement(1065202..1066893) 1 NC_008048.1 peptidase M28 1066893 4082314 Sala_1031 Sphingopyxis alaskensis RB2256 peptidase M28 YP_616081.1 1065202 R 317655 CDS YP_616082.1 103486521 4082315 1067504..1068319 1 NC_008048.1 oxidoreductase FAD/NAD(P)-binding protein 1068319 4082315 Sala_1032 Sphingopyxis alaskensis RB2256 oxidoreductase FAD/NAD(P)-binding protein YP_616082.1 1067504 D 317655 CDS YP_616083.1 103486522 4082316 1068389..1069021 1 NC_008048.1 phospholipid/glycerol acyltransferase 1069021 4082316 Sala_1033 Sphingopyxis alaskensis RB2256 phospholipid/glycerol acyltransferase YP_616083.1 1068389 D 317655 CDS YP_616084.1 103486523 4082317 1069018..1069827 1 NC_008048.1 hypothetical protein 1069827 4082317 Sala_1034 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616084.1 1069018 D 317655 CDS YP_616085.1 103486524 4082318 1069803..1070207 1 NC_008048.1 hypothetical protein 1070207 4082318 Sala_1035 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616085.1 1069803 D 317655 CDS YP_616086.1 103486525 4082319 complement(1070273..1071163) 1 NC_008048.1 hypothetical protein 1071163 4082319 Sala_1036 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616086.1 1070273 R 317655 CDS YP_616087.1 103486526 4082320 complement(1071275..1071814) 1 NC_008048.1 (2Fe-2S)-binding protein 1071814 4082320 Sala_1037 Sphingopyxis alaskensis RB2256 (2Fe-2S)-binding protein YP_616087.1 1071275 R 317655 CDS YP_616088.1 103486527 4082321 complement(1071842..1072606) 1 NC_008048.1 aldolase II superfamily protein 1072606 4082321 Sala_1038 Sphingopyxis alaskensis RB2256 aldolase II superfamily protein YP_616088.1 1071842 R 317655 CDS YP_616089.1 103486528 4082322 1072884..1073090 1 NC_008048.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 1073090 rpsU 4082322 rpsU Sphingopyxis alaskensis RB2256 30S ribosomal protein S21 YP_616089.1 1072884 D 317655 CDS YP_616090.1 103486529 4082323 complement(1073289..1074218) 1 NC_008048.1 2OG-Fe(II) oxygenase 1074218 4082323 Sala_1040 Sphingopyxis alaskensis RB2256 2OG-Fe(II) oxygenase YP_616090.1 1073289 R 317655 CDS YP_616091.1 103486530 4082324 1074350..1074775 1 NC_008048.1 hypothetical protein 1074775 4082324 Sala_1041 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616091.1 1074350 D 317655 CDS YP_616092.1 103486531 4080767 complement(1074814..1075239) 1 NC_008048.1 type IV pilus assembly PilZ 1075239 4080767 Sala_1042 Sphingopyxis alaskensis RB2256 type IV pilus assembly PilZ YP_616092.1 1074814 R 317655 CDS YP_616093.1 103486532 4080768 complement(1075761..1076444) 1 NC_008048.1 pseudouridine synthase 1076444 4080768 Sala_1043 Sphingopyxis alaskensis RB2256 pseudouridine synthase YP_616093.1 1075761 R 317655 CDS YP_616094.1 103486533 4080769 complement(1076498..1077640) 1 NC_008048.1 cell wall hydrolase SleB 1077640 4080769 Sala_1044 Sphingopyxis alaskensis RB2256 cell wall hydrolase SleB YP_616094.1 1076498 R 317655 CDS YP_616095.1 103486534 4080770 complement(1077650..1078570) 1 NC_008048.1 cysteine synthase 1078570 4080770 Sala_1045 Sphingopyxis alaskensis RB2256 cysteine synthase YP_616095.1 1077650 R 317655 CDS YP_616096.1 103486535 4080771 complement(1078567..1079880) 1 NC_008048.1 major facilitator superfamily transporter 1079880 4080771 Sala_1046 Sphingopyxis alaskensis RB2256 major facilitator superfamily transporter YP_616096.1 1078567 R 317655 CDS YP_616097.1 103486536 4080772 complement(1080233..1081546) 1 NC_008048.1 hypothetical protein 1081546 4080772 Sala_1047 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616097.1 1080233 R 317655 CDS YP_616098.1 103486537 4080773 complement(1081853..1082632) 1 NC_008048.1 protein SapC protein 1082632 4080773 Sala_1048 Sphingopyxis alaskensis RB2256 protein SapC protein YP_616098.1 1081853 R 317655 CDS YP_616099.1 103486538 4080774 complement(1082741..1084165) 1 NC_008048.1 FAD linked oxidase-like protein 1084165 4080774 Sala_1049 Sphingopyxis alaskensis RB2256 FAD linked oxidase-like protein YP_616099.1 1082741 R 317655 CDS YP_616100.1 103486539 4080775 1084354..1084872 1 NC_008048.1 hypothetical protein 1084872 4080775 Sala_1050 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616100.1 1084354 D 317655 CDS YP_616101.1 103486540 4080776 1084987..1086363 1 NC_008048.1 DEAD/DEAH box helicase 1086363 4080776 Sala_1051 Sphingopyxis alaskensis RB2256 DEAD/DEAH box helicase YP_616101.1 1084987 D 317655 CDS YP_616102.1 103486541 4080777 complement(1086470..1086712) 1 NC_008048.1 hypothetical protein 1086712 4080777 Sala_1052 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616102.1 1086470 R 317655 CDS YP_616103.1 103486542 4080778 1086847..1087341 1 NC_008048.1 transposase, IS4 1087341 4080778 Sala_1053 Sphingopyxis alaskensis RB2256 transposase, IS4 YP_616103.1 1086847 D 317655 CDS YP_616104.1 103486543 4080779 1087421..1088371 1 NC_008048.1 integrase catalytic subunit 1088371 4080779 Sala_1054 Sphingopyxis alaskensis RB2256 integrase catalytic subunit YP_616104.1 1087421 D 317655 CDS YP_616105.1 103486544 4080780 complement(1088368..1089381) 1 NC_008048.1 zinc-binding alcohol dehydrogenase 1089381 4080780 Sala_1055 Sphingopyxis alaskensis RB2256 zinc-binding alcohol dehydrogenase YP_616105.1 1088368 R 317655 CDS YP_616106.1 103486545 4080782 1089732..1090289 1 NC_008048.1 rare lipoprotein A 1090289 4080782 Sala_1056 Sphingopyxis alaskensis RB2256 rare lipoprotein A YP_616106.1 1089732 D 317655 CDS YP_616107.1 103486546 4080783 complement(1090286..1090828) 1 NC_008048.1 hypothetical protein 1090828 4080783 Sala_1057 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616107.1 1090286 R 317655 CDS YP_616108.1 103486547 4080784 complement(1090825..1091682) 1 NC_008048.1 pseudouridine synthase, Rsu 1091682 4080784 Sala_1058 Sphingopyxis alaskensis RB2256 pseudouridine synthase, Rsu YP_616108.1 1090825 R 317655 CDS YP_616109.1 103486548 4080785 1091838..1092275 1 NC_008048.1 response regulator receiver protein 1092275 4080785 Sala_1059 Sphingopyxis alaskensis RB2256 response regulator receiver protein YP_616109.1 1091838 D 317655 CDS YP_616110.1 103486549 4082325 1092389..1093792 1 NC_008048.1 major facilitator superfamily transporter 1093792 4082325 Sala_1060 Sphingopyxis alaskensis RB2256 major facilitator superfamily transporter YP_616110.1 1092389 D 317655 CDS YP_616111.1 103486550 4082326 complement(1093797..1095128) 1 NC_008048.1 bifunctional folylpolyglutamate synthase/dihydrofolate synthase 1095128 4082326 Sala_1061 Sphingopyxis alaskensis RB2256 bifunctional folylpolyglutamate synthase/dihydrofolate synthase YP_616111.1 1093797 R 317655 CDS YP_616112.1 103486551 4082327 complement(1095255..1096106) 1 NC_008048.1 acetyl-CoA carboxylase, carboxyl transferase subunit beta 1096106 4082327 Sala_1062 Sphingopyxis alaskensis RB2256 acetyl-CoA carboxylase, carboxyl transferase subunit beta YP_616112.1 1095255 R 317655 CDS YP_616113.1 103486552 4082328 complement(1096103..1096897) 1 NC_008048.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 1096897 trpA 4082328 trpA Sphingopyxis alaskensis RB2256 tryptophan synthase subunit alpha YP_616113.1 1096103 R 317655 CDS YP_616114.1 103486553 4082329 complement(1097097..1098329) 1 NC_008048.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 1098329 4082329 Sala_1064 Sphingopyxis alaskensis RB2256 tryptophan synthase subunit beta YP_616114.1 1097097 R 317655 CDS YP_616115.1 103486554 4082330 complement(1098420..1099061) 1 NC_008048.1 phosphoribosylanthranilate isomerase 1099061 4082330 Sala_1065 Sphingopyxis alaskensis RB2256 phosphoribosylanthranilate isomerase YP_616115.1 1098420 R 317655 CDS YP_616116.1 103486555 4082331 complement(1099191..1099865) 1 NC_008048.1 orotidine 5'-phosphate decarboxylase 1099865 4082331 Sala_1066 Sphingopyxis alaskensis RB2256 orotidine 5'-phosphate decarboxylase YP_616116.1 1099191 R 317655 CDS YP_616117.1 103486556 4082332 complement(1099862..1100275) 1 NC_008048.1 hypothetical protein 1100275 4082332 Sala_1067 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616117.1 1099862 R 317655 CDS YP_616118.1 103486557 4082333 complement(1100283..1101599) 1 NC_008048.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 1101599 4082333 Sala_1068 Sphingopyxis alaskensis RB2256 adenylosuccinate lyase YP_616118.1 1100283 R 317655 CDS YP_616119.1 103486558 4082334 1101797..1102261 1 NC_008048.1 calcium-binding EF-hand 1102261 4082334 Sala_1069 Sphingopyxis alaskensis RB2256 calcium-binding EF-hand YP_616119.1 1101797 D 317655 CDS YP_616120.1 103486559 4082335 complement(1102414..1103232) 1 NC_008048.1 DNA repair protein RadC 1103232 4082335 Sala_1070 Sphingopyxis alaskensis RB2256 DNA repair protein RadC YP_616120.1 1102414 R 317655 CDS YP_616121.1 103486560 4082336 1103376..1103789 1 NC_008048.1 hypothetical protein 1103789 4082336 Sala_1071 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616121.1 1103376 D 317655 CDS YP_616122.1 103486561 4082337 1103920..1106475 1 NC_008048.1 hypothetical protein 1106475 4082337 Sala_1072 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616122.1 1103920 D 317655 CDS YP_616123.1 103486562 4082338 1106538..1106684 1 NC_008048.1 hypothetical protein 1106684 4082338 Sala_1073 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616123.1 1106538 D 317655 CDS YP_616124.1 103486563 4082339 1106699..1107103 1 NC_008048.1 hypothetical protein 1107103 4082339 Sala_1074 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616124.1 1106699 D 317655 CDS YP_616125.1 103486564 4082340 1107316..1107636 1 NC_008048.1 FoF1 ATP synthase subunit I 1107636 4082340 Sala_1075 Sphingopyxis alaskensis RB2256 FoF1 ATP synthase subunit I YP_616125.1 1107316 D 317655 CDS YP_616126.1 103486565 4082341 1107705..1108490 1 NC_008048.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 1108490 4082341 Sala_1076 Sphingopyxis alaskensis RB2256 F0F1 ATP synthase subunit A YP_616126.1 1107705 D 317655 CDS YP_616127.1 103486566 4082342 1108531..1108758 1 NC_008048.1 H+-transporting two-sector ATPase subunit C 1108758 4082342 Sala_1077 Sphingopyxis alaskensis RB2256 H+-transporting two-sector ATPase subunit C YP_616127.1 1108531 D 317655 CDS YP_616128.1 103486567 4082343 1108838..1109338 1 NC_008048.1 H+-transporting two-sector ATPase subunit B/B' 1109338 4082343 Sala_1078 Sphingopyxis alaskensis RB2256 H+-transporting two-sector ATPase subunit B/B' YP_616128.1 1108838 D 317655 CDS YP_616129.1 103486568 4081554 1109331..1109861 1 NC_008048.1 H+-transporting two-sector ATPase subunit B/B' 1109861 4081554 Sala_1079 Sphingopyxis alaskensis RB2256 H+-transporting two-sector ATPase subunit B/B' YP_616129.1 1109331 D 317655 CDS YP_616130.1 103486569 4081555 complement(1109831..1110097) 1 NC_008048.1 hypothetical protein 1110097 4081555 Sala_1080 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616130.1 1109831 R 317655 CDS YP_616131.1 103486570 4081556 complement(1110108..1110860) 1 NC_008048.1 short-chain dehydrogenase/reductase SDR 1110860 4081556 Sala_1081 Sphingopyxis alaskensis RB2256 short-chain dehydrogenase/reductase SDR YP_616131.1 1110108 R 317655 CDS YP_616132.1 103486571 4081557 1110898..1112832 1 NC_008048.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 1112832 uvrC 4081557 uvrC Sphingopyxis alaskensis RB2256 excinuclease ABC subunit C YP_616132.1 1110898 D 317655 CDS YP_616133.1 103486572 4081558 1112933..1113331 1 NC_008048.1 phenylacetic acid degradation-related protein 1113331 4081558 Sala_1083 Sphingopyxis alaskensis RB2256 phenylacetic acid degradation-related protein YP_616133.1 1112933 D 317655 CDS YP_616134.1 103486573 4081559 1113355..1113933 1 NC_008048.1 recombinational DNA repair protein (RecF pathway)-like protein 1113933 4081559 Sala_1084 Sphingopyxis alaskensis RB2256 recombinational DNA repair protein (RecF pathway)-like protein YP_616134.1 1113355 D 317655 CDS YP_616135.1 103486574 4081560 1114103..1115149 1 NC_008048.1 3-isopropylmalate dehydrogenase 1115149 4081560 Sala_1085 Sphingopyxis alaskensis RB2256 3-isopropylmalate dehydrogenase YP_616135.1 1114103 D 317655 CDS YP_616136.1 103486575 4081561 1115155..1116360 1 NC_008048.1 cystathionine gamma-synthase 1116360 4081561 Sala_1086 Sphingopyxis alaskensis RB2256 cystathionine gamma-synthase YP_616136.1 1115155 D 317655 CDS YP_616137.1 103486576 4081562 1116378..1116779 1 NC_008048.1 protein associated with Co2+ and Mg2+ efflux; ApaG protein 1116779 apaG 4081562 apaG Sphingopyxis alaskensis RB2256 ApaG protein YP_616137.1 1116378 D 317655 CDS YP_616138.1 103486577 4081563 1116776..1117567 1 NC_008048.1 LysR family transcriptional regulator 1117567 4081563 Sala_1088 Sphingopyxis alaskensis RB2256 LysR family transcriptional regulator YP_616138.1 1116776 D 317655 CDS YP_616139.1 103486578 4081564 1117577..1117930 1 NC_008048.1 hypothetical protein 1117930 4081564 Sala_1089 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616139.1 1117577 D 317655 CDS YP_616140.1 103486579 4081565 complement(1117927..1119258) 1 NC_008048.1 putative beta-lactamase 1119258 4081565 Sala_1090 Sphingopyxis alaskensis RB2256 putative beta-lactamase YP_616140.1 1117927 R 317655 CDS YP_616141.1 103486580 4081566 complement(1119311..1121290) 1 NC_008048.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 1121290 4081566 Sala_1091 Sphingopyxis alaskensis RB2256 DNA topoisomerase IV subunit B YP_616141.1 1119311 R 317655 CDS YP_616142.1 103486581 4081567 1121459..1122292 1 NC_008048.1 membrane protein 1122292 4081567 Sala_1092 Sphingopyxis alaskensis RB2256 membrane protein YP_616142.1 1121459 D 317655 CDS YP_616143.1 103486582 4081568 complement(1122345..1122743) 1 NC_008048.1 phenylacetic acid degradation-related protein 1122743 4081568 Sala_1093 Sphingopyxis alaskensis RB2256 phenylacetic acid degradation-related protein YP_616143.1 1122345 R 317655 CDS YP_616144.1 103486583 4081569 complement(1122753..1123445) 1 NC_008048.1 GcrA cell cycle regulator 1123445 4081569 Sala_1094 Sphingopyxis alaskensis RB2256 GcrA cell cycle regulator YP_616144.1 1122753 R 317655 CDS YP_616145.1 103486584 4081570 1123565..1124437 1 NC_008048.1 hypothetical protein 1124437 4081570 Sala_1095 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616145.1 1123565 D 317655 CDS YP_616146.1 103486585 4081571 complement(1124446..1124820) 1 NC_008048.1 hemimethylated DNA-binding region 1124820 4081571 Sala_1096 Sphingopyxis alaskensis RB2256 hemimethylated DNA-binding region YP_616146.1 1124446 R 317655 CDS YP_616147.1 103486586 4081572 1124996..1125625 1 NC_008048.1 hypothetical protein 1125625 4081572 Sala_1097 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616147.1 1124996 D 317655 CDS YP_616148.1 103486587 4082036 complement(1125857..1129093) 1 NC_008048.1 amidohydrolase 1129093 4082036 Sala_1098 Sphingopyxis alaskensis RB2256 amidohydrolase YP_616148.1 1125857 R 317655 CDS YP_616149.1 103486588 4082037 1129237..1130415 1 NC_008048.1 L-carnitine dehydratase/bile acid-inducible protein F 1130415 4082037 Sala_1099 Sphingopyxis alaskensis RB2256 L-carnitine dehydratase/bile acid-inducible protein F YP_616149.1 1129237 D 317655 CDS YP_616150.1 103486589 4082038 1130492..1131373 1 NC_008048.1 YghU; B2989; one of eight putative glutathione transferase proteins from E. coli; putative glutathione S-transferase YghU 1131373 4082038 Sala_1100 Sphingopyxis alaskensis RB2256 putative glutathione S-transferase YghU YP_616150.1 1130492 D 317655 CDS YP_616151.1 103486590 4082039 1131537..1131980 1 NC_008048.1 TadE-like protein 1131980 4082039 Sala_1101 Sphingopyxis alaskensis RB2256 TadE-like protein YP_616151.1 1131537 D 317655 CDS YP_616152.1 103486591 4082040 1131983..1133611 1 NC_008048.1 hypothetical protein 1133611 4082040 Sala_1102 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616152.1 1131983 D 317655 CDS YP_616153.1 103486592 4082041 1133732..1134628 1 NC_008048.1 putative PAS/PAC sensor protein 1134628 4082041 Sala_1103 Sphingopyxis alaskensis RB2256 putative PAS/PAC sensor protein YP_616153.1 1133732 D 317655 CDS YP_616154.1 103486593 4082042 1134779..1135972 1 NC_008048.1 acyl-CoA dehydrogenase-like protein 1135972 4082042 Sala_1104 Sphingopyxis alaskensis RB2256 acyl-CoA dehydrogenase-like protein YP_616154.1 1134779 D 317655 CDS YP_616155.1 103486594 4082043 1136079..1137218 1 NC_008048.1 acyl-CoA dehydrogenase-like protein 1137218 4082043 Sala_1105 Sphingopyxis alaskensis RB2256 acyl-CoA dehydrogenase-like protein YP_616155.1 1136079 D 317655 CDS YP_616156.1 103486595 4082044 complement(1137522..1140011) 1 NC_008048.1 TonB-dependent receptor 1140011 4082044 Sala_1106 Sphingopyxis alaskensis RB2256 TonB-dependent receptor YP_616156.1 1137522 R 317655 CDS YP_616157.1 103486596 4082045 complement(1140014..1140949) 1 NC_008048.1 putative FecR protein 1140949 4082045 Sala_1107 Sphingopyxis alaskensis RB2256 putative FecR protein YP_616157.1 1140014 R 317655 CDS YP_616158.1 103486597 4082046 complement(1140939..1141460) 1 NC_008048.1 ECF subfamily RNA polymerase sigma-24 factor 1141460 4082046 Sala_1108 Sphingopyxis alaskensis RB2256 ECF subfamily RNA polymerase sigma-24 factor YP_616158.1 1140939 R 317655 CDS YP_616159.1 103486598 4082047 complement(1141695..1144910) 1 NC_008048.1 autotransporter beta-domain-containing protein 1144910 4082047 Sala_1109 Sphingopyxis alaskensis RB2256 autotransporter beta-domain-containing protein YP_616159.1 1141695 R 317655 CDS YP_616160.1 103486599 4082048 1145105..1146076 1 NC_008048.1 glucokinase 1146076 4082048 Sala_1110 Sphingopyxis alaskensis RB2256 glucokinase YP_616160.1 1145105 D 317655 CDS YP_616161.1 103486600 4082049 1146120..1146860 1 NC_008048.1 peptidase C26 1146860 4082049 Sala_1111 Sphingopyxis alaskensis RB2256 peptidase C26 YP_616161.1 1146120 D 317655 CDS YP_616162.1 103486601 4082051 1148501..1149436 1 NC_008048.1 hypothetical protein 1149436 4082051 Sala_1113 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616162.1 1148501 D 317655 CDS YP_616163.1 103486602 4082052 complement(1149569..1150699) 1 NC_008048.1 spermidine/putrescine ABC transporter ATP-binding subunit 1150699 4082052 Sala_1114 Sphingopyxis alaskensis RB2256 spermidine/putrescine ABC transporter ATP-binding subunit YP_616163.1 1149569 R 317655 CDS YP_616164.1 103486603 4082053 complement(1150702..1151547) 1 NC_008048.1 binding-protein-dependent transport system inner membrane protein 1151547 4082053 Sala_1115 Sphingopyxis alaskensis RB2256 binding-protein-dependent transport system inner membrane protein YP_616164.1 1150702 R 317655 CDS YP_616165.1 103486604 4081476 complement(1151544..1152449) 1 NC_008048.1 binding-protein-dependent transport system inner membrane protein 1152449 4081476 Sala_1116 Sphingopyxis alaskensis RB2256 binding-protein-dependent transport system inner membrane protein YP_616165.1 1151544 R 317655 CDS YP_616166.1 103486605 4081477 complement(1152471..1153577) 1 NC_008048.1 extracellular solute-binding protein 1153577 4081477 Sala_1117 Sphingopyxis alaskensis RB2256 extracellular solute-binding protein YP_616166.1 1152471 R 317655 CDS YP_616167.1 103486606 4081478 complement(1153670..1155061) 1 NC_008048.1 glutamate--ammonia ligase 1155061 4081478 Sala_1118 Sphingopyxis alaskensis RB2256 glutamate--ammonia ligase YP_616167.1 1153670 R 317655 CDS YP_616168.1 103486607 4081479 complement(1155069..1156412) 1 NC_008048.1 aminotransferase 1156412 4081479 Sala_1119 Sphingopyxis alaskensis RB2256 aminotransferase YP_616168.1 1155069 R 317655 CDS YP_616169.1 103486608 4081480 complement(1156409..1157674) 1 NC_008048.1 FAD dependent oxidoreductase 1157674 4081480 Sala_1120 Sphingopyxis alaskensis RB2256 FAD dependent oxidoreductase YP_616169.1 1156409 R 317655 CDS YP_616170.1 103486609 4081481 complement(1157794..1159140) 1 NC_008048.1 glutamate--ammonia ligase 1159140 4081481 Sala_1121 Sphingopyxis alaskensis RB2256 glutamate--ammonia ligase YP_616170.1 1157794 R 317655 CDS YP_616171.1 103486610 4081482 1159295..1160611 1 NC_008048.1 catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate; beta alanine--pyruvate transaminase 1160611 4081482 Sala_1122 Sphingopyxis alaskensis RB2256 beta alanine--pyruvate transaminase YP_616171.1 1159295 D 317655 CDS YP_616172.1 103486611 4081483 complement(1160608..1162056) 1 NC_008048.1 sensor signal transduction histidine kinase 1162056 4081483 Sala_1123 Sphingopyxis alaskensis RB2256 sensor signal transduction histidine kinase YP_616172.1 1160608 R 317655 CDS YP_616173.1 103486612 4081484 1162461..1163462 1 NC_008048.1 fumarylacetoacetate (FAA) hydrolase 1163462 4081484 Sala_1124 Sphingopyxis alaskensis RB2256 fumarylacetoacetate (FAA) hydrolase YP_616173.1 1162461 D 317655 CDS YP_616174.1 103486613 4081485 complement(1163525..1164568) 1 NC_008048.1 type II secretion system protein 1164568 4081485 Sala_1125 Sphingopyxis alaskensis RB2256 type II secretion system protein YP_616174.1 1163525 R 317655 CDS YP_616175.1 103486614 4081486 complement(1164582..1165514) 1 NC_008048.1 type II secretion system protein 1165514 4081486 Sala_1126 Sphingopyxis alaskensis RB2256 type II secretion system protein YP_616175.1 1164582 R 317655 CDS YP_616176.1 103486615 4081487 complement(1165611..1166879) 1 NC_008048.1 response regulator receiver protein 1166879 4081487 Sala_1127 Sphingopyxis alaskensis RB2256 response regulator receiver protein YP_616176.1 1165611 R 317655 CDS YP_616177.1 103486616 4081488 complement(1166876..1167517) 1 NC_008048.1 hypothetical protein 1167517 4081488 Sala_1128 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616177.1 1166876 R 317655 CDS YP_616178.1 103486617 4081489 complement(1167543..1169024) 1 NC_008048.1 type II and III secretion system protein 1169024 4081489 Sala_1129 Sphingopyxis alaskensis RB2256 type II and III secretion system protein YP_616178.1 1167543 R 317655 CDS YP_616179.1 103486618 4081490 complement(1169026..1170063) 1 NC_008048.1 Flp pilus assembly CpaB 1170063 4081490 Sala_1130 Sphingopyxis alaskensis RB2256 Flp pilus assembly CpaB YP_616179.1 1169026 R 317655 CDS YP_616180.1 103486619 4081491 complement(1170111..1170599) 1 NC_008048.1 peptidase A24A, prepilin type IV 1170599 4081491 Sala_1131 Sphingopyxis alaskensis RB2256 peptidase A24A, prepilin type IV YP_616180.1 1170111 R 317655 CDS YP_616181.1 103486620 4081492 1170695..1171825 1 NC_008048.1 FAD dependent oxidoreductase 1171825 4081492 Sala_1132 Sphingopyxis alaskensis RB2256 FAD dependent oxidoreductase YP_616181.1 1170695 D 317655 CDS YP_616182.1 103486621 4081493 1171836..1172087 1 NC_008048.1 hypothetical protein 1172087 4081493 Sala_1133 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616182.1 1171836 D 317655 CDS YP_616183.1 103486622 4081494 complement(1172105..1172557) 1 NC_008048.1 ribonuclease H 1172557 4081494 Sala_1134 Sphingopyxis alaskensis RB2256 ribonuclease H YP_616183.1 1172105 R 317655 CDS YP_616184.1 103486623 4081495 complement(1172554..1173516) 1 NC_008048.1 homoserine kinase 1173516 4081495 Sala_1135 Sphingopyxis alaskensis RB2256 homoserine kinase YP_616184.1 1172554 R 317655 CDS YP_616185.1 103486624 4080881 complement(1173516..1174496) 1 NC_008048.1 hydroxymethylbutenyl pyrophosphate reductase 1174496 4080881 Sala_1136 Sphingopyxis alaskensis RB2256 hydroxymethylbutenyl pyrophosphate reductase YP_616185.1 1173516 R 317655 CDS YP_616186.1 103486625 4080882 1174645..1175316 1 NC_008048.1 hypothetical protein 1175316 4080882 Sala_1137 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616186.1 1174645 D 317655 CDS YP_616187.1 103486626 4080883 1175449..1177176 1 NC_008048.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 1177176 argS 4080883 argS Sphingopyxis alaskensis RB2256 arginyl-tRNA synthetase YP_616187.1 1175449 D 317655 CDS YP_616188.1 103486627 4080884 1177176..1177904 1 NC_008048.1 sporulation-like protein 1177904 4080884 Sala_1139 Sphingopyxis alaskensis RB2256 sporulation-like protein YP_616188.1 1177176 D 317655 CDS YP_616189.1 103486628 4080885 1178013..1179020 1 NC_008048.1 beta-N-acetylhexosaminidase 1179020 4080885 Sala_1140 Sphingopyxis alaskensis RB2256 beta-N-acetylhexosaminidase YP_616189.1 1178013 D 317655 CDS YP_616190.1 103486629 4080886 1178998..1179810 1 NC_008048.1 chromosome segregation and condensation protein ScpA 1179810 4080886 Sala_1141 Sphingopyxis alaskensis RB2256 chromosome segregation and condensation protein ScpA YP_616190.1 1178998 D 317655 CDS YP_616191.1 103486630 4080887 1179807..1180400 1 NC_008048.1 putative transcriptional regulator 1180400 4080887 Sala_1142 Sphingopyxis alaskensis RB2256 putative transcriptional regulator YP_616191.1 1179807 D 317655 CDS YP_616192.1 103486631 4080888 1180426..1180659 1 NC_008048.1 TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin arginine translocase protein A 1180659 tatA 4080888 tatA Sphingopyxis alaskensis RB2256 twin arginine translocase protein A YP_616192.1 1180426 D 317655 CDS YP_616193.1 103486632 4080889 1180692..1181069 1 NC_008048.1 twin-arginine translocation protein TatB 1181069 4080889 Sala_1144 Sphingopyxis alaskensis RB2256 twin-arginine translocation protein TatB YP_616193.1 1180692 D 317655 CDS YP_616194.1 103486633 4080890 1181066..1181875 1 NC_008048.1 Sec-independent protein translocase TatC 1181875 4080890 Sala_1145 Sphingopyxis alaskensis RB2256 Sec-independent protein translocase TatC YP_616194.1 1181066 D 317655 CDS YP_616195.1 103486634 4080891 complement(1181893..1182189) 1 NC_008048.1 entericidin EcnAB 1182189 4080891 Sala_1146 Sphingopyxis alaskensis RB2256 entericidin EcnAB YP_616195.1 1181893 R 317655 CDS YP_616196.1 103486635 4080892 complement(1182257..1183696) 1 NC_008048.1 magnesium transporter 1183696 4080892 Sala_1147 Sphingopyxis alaskensis RB2256 magnesium transporter YP_616196.1 1182257 R 317655 CDS YP_616197.1 103486636 4080893 1183856..1184302 1 NC_008048.1 cyclophilin type peptidyl-prolyl cis-trans isomerase 1184302 4080893 Sala_1148 Sphingopyxis alaskensis RB2256 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_616197.1 1183856 D 317655 CDS YP_616198.1 103486637 4080894 complement(1184498..1185634) 1 NC_008048.1 2-nitropropane dioxygenase 1185634 4080894 Sala_1149 Sphingopyxis alaskensis RB2256 2-nitropropane dioxygenase YP_616198.1 1184498 R 317655 CDS YP_616199.1 103486638 4080895 1185928..1186845 1 NC_008048.1 nicotinate-nucleotide pyrophosphorylase 1186845 4080895 Sala_1150 Sphingopyxis alaskensis RB2256 nicotinate-nucleotide pyrophosphorylase YP_616199.1 1185928 D 317655 CDS YP_616200.1 103486639 4080896 1186832..1187554 1 NC_008048.1 ribonuclease T2 1187554 4080896 Sala_1151 Sphingopyxis alaskensis RB2256 ribonuclease T2 YP_616200.1 1186832 D 317655 CDS YP_616201.1 103486640 4080897 1187645..1187869 1 NC_008048.1 hypothetical protein 1187869 4080897 Sala_1152 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616201.1 1187645 D 317655 CDS YP_616202.1 103486641 4080898 complement(1188048..1189343) 1 NC_008048.1 major facilitator superfamily transporter 1189343 4080898 Sala_1153 Sphingopyxis alaskensis RB2256 major facilitator superfamily transporter YP_616202.1 1188048 R 317655 CDS YP_616203.1 103486642 4080899 1189458..1190045 1 NC_008048.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1190045 4080899 Sala_1154 Sphingopyxis alaskensis RB2256 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_616203.1 1189458 D 317655 CDS YP_616204.1 103486643 4080861 1190045..1190302 1 NC_008048.1 molybdopterin converting factor subunit 1 1190302 4080861 Sala_1155 Sphingopyxis alaskensis RB2256 molybdopterin converting factor subunit 1 YP_616204.1 1190045 D 317655 CDS YP_616205.1 103486644 4080862 1190299..1190739 1 NC_008048.1 molybdopterin biosynthesis MoaE 1190739 4080862 Sala_1156 Sphingopyxis alaskensis RB2256 molybdopterin biosynthesis MoaE YP_616205.1 1190299 D 317655 CDS YP_616206.1 103486645 4080863 complement(1190798..1191778) 1 NC_008048.1 LysR family transcriptional regulator 1191778 4080863 Sala_1157 Sphingopyxis alaskensis RB2256 LysR family transcriptional regulator YP_616206.1 1190798 R 317655 CDS YP_616207.1 103486646 4080864 1191839..1192306 1 NC_008048.1 hypothetical protein 1192306 4080864 Sala_1158 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616207.1 1191839 D 317655 CDS YP_616208.1 103486647 4080865 complement(1192406..1193755) 1 NC_008048.1 TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine; tRNA (uracil-5-)-methyltransferase Gid 1193755 4080865 Sala_1159 Sphingopyxis alaskensis RB2256 tRNA (uracil-5-)-methyltransferase Gid YP_616208.1 1192406 R 317655 CDS YP_616209.1 103486648 4080866 1193831..1194502 1 NC_008048.1 YjeF-like protein 1194502 4080866 Sala_1160 Sphingopyxis alaskensis RB2256 YjeF-like protein YP_616209.1 1193831 D 317655 CDS YP_616210.1 103486649 4080867 complement(1194499..1195344) 1 NC_008048.1 taurine catabolism dioxygenase TauD/TfdA 1195344 4080867 Sala_1161 Sphingopyxis alaskensis RB2256 taurine catabolism dioxygenase TauD/TfdA YP_616210.1 1194499 R 317655 CDS YP_616211.1 103486650 4080868 1195428..1196015 1 NC_008048.1 alkyl hydroperoxide reductase 1196015 4080868 Sala_1162 Sphingopyxis alaskensis RB2256 alkyl hydroperoxide reductase YP_616211.1 1195428 D 317655 CDS YP_616212.1 103486651 4080869 complement(1196047..1196358) 1 NC_008048.1 hypothetical protein 1196358 4080869 Sala_1163 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616212.1 1196047 R 317655 CDS YP_616213.1 103486652 4080870 complement(1196355..1199060) 1 NC_008048.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 1199060 4080870 Sala_1164 Sphingopyxis alaskensis RB2256 DNA gyrase subunit A YP_616213.1 1196355 R 317655 CDS YP_616214.1 103486653 4080871 complement(1199164..1199889) 1 NC_008048.1 short-chain dehydrogenase/reductase SDR 1199889 4080871 Sala_1165 Sphingopyxis alaskensis RB2256 short-chain dehydrogenase/reductase SDR YP_616214.1 1199164 R 317655 CDS YP_616215.1 103486654 4080872 1199913..1201196 1 NC_008048.1 hypothetical protein 1201196 4080872 Sala_1166 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616215.1 1199913 D 317655 CDS YP_616216.1 103486655 4080873 1201255..1202166 1 NC_008048.1 hypothetical protein 1202166 4080873 Sala_1167 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616216.1 1201255 D 317655 CDS YP_616217.1 103486656 4080874 1202163..1203533 1 NC_008048.1 histidine kinase 1203533 4080874 Sala_1168 Sphingopyxis alaskensis RB2256 histidine kinase YP_616217.1 1202163 D 317655 CDS YP_616218.1 103486657 4080875 complement(1203705..1204388) 1 NC_008048.1 Crp/FNR family transcriptional regulator 1204388 4080875 Sala_1169 Sphingopyxis alaskensis RB2256 Crp/FNR family transcriptional regulator YP_616218.1 1203705 R 317655 CDS YP_616219.1 103486658 4080876 complement(1204407..1206038) 1 NC_008048.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 1206038 pyrG 4080876 pyrG Sphingopyxis alaskensis RB2256 CTP synthetase YP_616219.1 1204407 R 317655 CDS YP_616220.1 103486659 4080877 complement(1206147..1206611) 1 NC_008048.1 preprotein translocase subunit SecG 1206611 4080877 Sala_1171 Sphingopyxis alaskensis RB2256 preprotein translocase subunit SecG YP_616220.1 1206147 R 317655 CDS YP_616221.1 103486660 4080878 complement(1206815..1207561) 1 NC_008048.1 triosephosphate isomerase 1207561 4080878 Sala_1172 Sphingopyxis alaskensis RB2256 triosephosphate isomerase YP_616221.1 1206815 R 317655 CDS YP_616222.1 103486661 4080879 1207666..1209687 1 NC_008048.1 hypothetical protein 1209687 4080879 Sala_1173 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616222.1 1207666 D 317655 CDS YP_616223.1 103486662 4080880 1209690..1211207 1 NC_008048.1 anthranilate synthase component I 1211207 4080880 Sala_1174 Sphingopyxis alaskensis RB2256 anthranilate synthase component I YP_616223.1 1209690 D 317655 CDS YP_616224.1 103486663 4080823 1211576..1212826 1 NC_008048.1 LolC/E family lipoprotein releasing system, transmembrane protein 1212826 4080823 Sala_1175 Sphingopyxis alaskensis RB2256 LolC/E family lipoprotein releasing system, transmembrane protein YP_616224.1 1211576 D 317655 CDS YP_616225.1 103486664 4080824 1212819..1213496 1 NC_008048.1 ABC transporter 1213496 4080824 Sala_1176 Sphingopyxis alaskensis RB2256 ABC transporter YP_616225.1 1212819 D 317655 CDS YP_616226.1 103486665 4080825 1213526..1214125 1 NC_008048.1 hypothetical protein 1214125 4080825 Sala_1177 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616226.1 1213526 D 317655 CDS YP_616227.1 103486666 4080826 1214127..1214603 1 NC_008048.1 glutathione peroxidase 1214603 4080826 Sala_1178 Sphingopyxis alaskensis RB2256 glutathione peroxidase YP_616227.1 1214127 D 317655 CDS YP_616228.1 103486667 4080827 1214764..1218252 1 NC_008048.1 DNA polymerase III subunit alpha 1218252 4080827 Sala_1179 Sphingopyxis alaskensis RB2256 DNA polymerase III subunit alpha YP_616228.1 1214764 D 317655 CDS YP_616229.1 103486668 4080828 1218331..1219935 1 NC_008048.1 AMP-dependent synthetase and ligase 1219935 4080828 Sala_1180 Sphingopyxis alaskensis RB2256 AMP-dependent synthetase and ligase YP_616229.1 1218331 D 317655 CDS YP_616230.1 103486669 4080829 complement(1219980..1221068) 1 NC_008048.1 radical SAM family protein 1221068 4080829 Sala_1181 Sphingopyxis alaskensis RB2256 radical SAM family protein YP_616230.1 1219980 R 317655 CDS YP_616231.1 103486670 4080830 complement(1221115..1221639) 1 NC_008048.1 molybdenum cofactor biosynthesis protein 1221639 4080830 Sala_1182 Sphingopyxis alaskensis RB2256 molybdenum cofactor biosynthesis protein YP_616231.1 1221115 R 317655 CDS YP_616232.1 103486671 4080831 complement(1221629..1223395) 1 NC_008048.1 lytic transglycosylase, catalytic 1223395 4080831 Sala_1183 Sphingopyxis alaskensis RB2256 lytic transglycosylase, catalytic YP_616232.1 1221629 R 317655 CDS YP_616233.1 103486672 4080832 complement(1223400..1224188) 1 NC_008048.1 uracil-DNA glycosylase superfamily protein 1224188 4080832 Sala_1184 Sphingopyxis alaskensis RB2256 uracil-DNA glycosylase superfamily protein YP_616233.1 1223400 R 317655 CDS YP_616234.1 103486673 4080833 1224308..1225963 1 NC_008048.1 electron-transferring-flavoprotein dehydrogenase 1225963 4080833 Sala_1185 Sphingopyxis alaskensis RB2256 electron-transferring-flavoprotein dehydrogenase YP_616234.1 1224308 D 317655 CDS YP_616235.1 103486674 4080834 1226160..1227608 1 NC_008048.1 hypothetical protein 1227608 4080834 Sala_1186 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616235.1 1226160 D 317655 CDS YP_616236.1 103486675 4080835 1227605..1228456 1 NC_008048.1 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 1228456 4080835 Sala_1187 Sphingopyxis alaskensis RB2256 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_616236.1 1227605 D 317655 CDS YP_616237.1 103486676 4080836 1228453..1229184 1 NC_008048.1 N-formylglutamate amidohydrolase 1229184 4080836 Sala_1188 Sphingopyxis alaskensis RB2256 N-formylglutamate amidohydrolase YP_616237.1 1228453 D 317655 CDS YP_616238.1 103486677 4080837 1229244..1231103 1 NC_008048.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 1231103 4080837 Sala_1189 Sphingopyxis alaskensis RB2256 dihydroxy-acid dehydratase YP_616238.1 1229244 D 317655 CDS YP_616239.1 103486678 4080838 1231100..1231462 1 NC_008048.1 hypothetical protein 1231462 4080838 Sala_1190 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616239.1 1231100 D 317655 CDS YP_616240.1 103486679 4080839 1231499..1232848 1 NC_008048.1 YjeF-related protein-like protein 1232848 4080839 Sala_1191 Sphingopyxis alaskensis RB2256 YjeF-related protein-like protein YP_616240.1 1231499 D 317655 CDS YP_616241.1 103486680 4080840 1232850..1234049 1 NC_008048.1 (uracil-5)-methyltransferase 1234049 4080840 Sala_1192 Sphingopyxis alaskensis RB2256 (uracil-5)-methyltransferase YP_616241.1 1232850 D 317655 CDS YP_616242.1 103486681 4080841 complement(1234050..1234484) 1 NC_008048.1 hypothetical protein 1234484 4080841 Sala_1193 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616242.1 1234050 R 317655 CDS YP_616243.1 103486682 4080689 complement(1234495..1234926) 1 NC_008048.1 hypothetical protein 1234926 4080689 Sala_1194 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616243.1 1234495 R 317655 CDS YP_616244.1 103486683 4080690 complement(1234974..1236143) 1 NC_008048.1 L-carnitine dehydratase/bile acid-inducible protein F 1236143 4080690 Sala_1195 Sphingopyxis alaskensis RB2256 L-carnitine dehydratase/bile acid-inducible protein F YP_616244.1 1234974 R 317655 CDS YP_616245.1 103486684 4080691 complement(1236229..1237602) 1 NC_008048.1 major facilitator superfamily transporter 1237602 4080691 Sala_1196 Sphingopyxis alaskensis RB2256 major facilitator superfamily transporter YP_616245.1 1236229 R 317655 CDS YP_616246.1 103486685 4080692 complement(1237642..1238835) 1 NC_008048.1 Orn/DAP/Arg decarboxylase 2 1238835 4080692 Sala_1197 Sphingopyxis alaskensis RB2256 Orn/DAP/Arg decarboxylase 2 YP_616246.1 1237642 R 317655 CDS YP_616247.1 103486686 4080693 complement(1239058..1240230) 1 NC_008048.1 Orn/DAP/Arg decarboxylase 2 1240230 4080693 Sala_1198 Sphingopyxis alaskensis RB2256 Orn/DAP/Arg decarboxylase 2 YP_616247.1 1239058 R 317655 CDS YP_616248.1 103486687 4080694 complement(1240249..1240599) 1 NC_008048.1 hypothetical protein 1240599 4080694 Sala_1199 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616248.1 1240249 R 317655 CDS YP_616249.1 103486688 4080695 complement(1240596..1241690) 1 NC_008048.1 alpha/beta hydrolase 1241690 4080695 Sala_1200 Sphingopyxis alaskensis RB2256 alpha/beta hydrolase YP_616249.1 1240596 R 317655 CDS YP_616250.1 103486689 4080696 complement(1241820..1243028) 1 NC_008048.1 saccharopine dehydrogenase 1243028 4080696 Sala_1201 Sphingopyxis alaskensis RB2256 saccharopine dehydrogenase YP_616250.1 1241820 R 317655 CDS YP_616251.1 103486690 4080697 1243095..1244096 1 NC_008048.1 pyridoxal-5'-phosphate-dependent protein subunit beta 1244096 4080697 Sala_1202 Sphingopyxis alaskensis RB2256 pyridoxal-5'-phosphate-dependent protein subunit beta YP_616251.1 1243095 D 317655 CDS YP_616252.1 103486691 4080698 1244143..1244577 1 NC_008048.1 hypothetical protein 1244577 4080698 Sala_1203 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616252.1 1244143 D 317655 CDS YP_616253.1 103486692 4080699 complement(1244700..1245965) 1 NC_008048.1 YcfA-like protein 1245965 4080699 Sala_1204 Sphingopyxis alaskensis RB2256 YcfA-like protein YP_616253.1 1244700 R 317655 CDS YP_616254.1 103486693 4080700 complement(1246052..1246741) 1 NC_008048.1 nitroreductase 1246741 4080700 Sala_1205 Sphingopyxis alaskensis RB2256 nitroreductase YP_616254.1 1246052 R 317655 CDS YP_616255.1 103486694 4080701 complement(1246738..1247958) 1 NC_008048.1 catalyzes the formation of 5-aminolevulinate from succinyl-CoA and glycine; 5-aminolevulinate synthase 1247958 4080701 Sala_1206 Sphingopyxis alaskensis RB2256 5-aminolevulinate synthase YP_616255.1 1246738 R 317655 CDS YP_616256.1 103486695 4080702 complement(1248095..1248901) 1 NC_008048.1 glutamate racemase 1248901 4080702 Sala_1207 Sphingopyxis alaskensis RB2256 glutamate racemase YP_616256.1 1248095 R 317655 CDS YP_616257.1 103486696 4080703 1249061..1249663 1 NC_008048.1 hypothetical protein 1249663 4080703 Sala_1208 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616257.1 1249061 D 317655 CDS YP_616258.1 103486697 4080704 1249660..1250742 1 NC_008048.1 DNA processing protein DprA 1250742 4080704 Sala_1209 Sphingopyxis alaskensis RB2256 DNA processing protein DprA YP_616258.1 1249660 D 317655 CDS YP_616259.1 103486698 4080705 1250855..1251085 1 NC_008048.1 hypothetical protein 1251085 4080705 Sala_1210 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616259.1 1250855 D 317655 CDS YP_616260.1 103486699 4080706 1251170..1253719 1 NC_008048.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 1253719 4080706 Sala_1211 Sphingopyxis alaskensis RB2256 DNA topoisomerase I YP_616260.1 1251170 D 317655 CDS YP_616261.1 103486700 4080707 complement(1253772..1254665) 1 NC_008048.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 1254665 era 4080707 era Sphingopyxis alaskensis RB2256 GTP-binding protein Era YP_616261.1 1253772 R 317655 CDS YP_616262.1 103486701 4080708 complement(1254662..1255342) 1 NC_008048.1 ribonuclease III 1255342 4080708 Sala_1213 Sphingopyxis alaskensis RB2256 ribonuclease III YP_616262.1 1254662 R 317655 CDS YP_616263.1 103486702 4080438 complement(1255339..1256220) 1 NC_008048.1 peptidase S26A, signal peptidase I 1256220 4080438 Sala_1214 Sphingopyxis alaskensis RB2256 peptidase S26A, signal peptidase I YP_616263.1 1255339 R 317655 CDS YP_616264.1 103486703 4080439 1256425..1257930 1 NC_008048.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 1257930 pgi 4080439 pgi Sphingopyxis alaskensis RB2256 glucose-6-phosphate isomerase YP_616264.1 1256425 D 317655 CDS YP_616265.1 103486704 4080440 1258022..1259368 1 NC_008048.1 glutathione reductase 1259368 4080440 Sala_1216 Sphingopyxis alaskensis RB2256 glutathione reductase YP_616265.1 1258022 D 317655 CDS YP_616266.1 103486705 4080441 complement(1259412..1260899) 1 NC_008048.1 XRE family transcriptional regulator 1260899 4080441 Sala_1217 Sphingopyxis alaskensis RB2256 XRE family transcriptional regulator YP_616266.1 1259412 R 317655 CDS YP_616267.1 103486706 4080443 1262473..1262979 1 NC_008048.1 hypothetical protein 1262979 4080443 Sala_1219 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616267.1 1262473 D 317655 CDS YP_616268.1 103486707 4080444 1262976..1263416 1 NC_008048.1 glyoxalase/bleomycin resistance protein/dioxygenase 1263416 4080444 Sala_1220 Sphingopyxis alaskensis RB2256 glyoxalase/bleomycin resistance protein/dioxygenase YP_616268.1 1262976 D 317655 CDS YP_616269.1 103486708 4080445 1263607..1265754 1 NC_008048.1 N-terminal domain; MDM; functions in conversion of succinate to propionate; methylmalonyl-CoA mutase 1265754 4080445 Sala_1221 Sphingopyxis alaskensis RB2256 methylmalonyl-CoA mutase YP_616269.1 1263607 D 317655 CDS YP_616270.1 103486709 4080446 1265868..1266857 1 NC_008048.1 biotin synthase 1266857 4080446 Sala_1222 Sphingopyxis alaskensis RB2256 biotin synthase YP_616270.1 1265868 D 317655 CDS YP_616271.1 103486710 4080447 1267078..1269084 1 NC_008048.1 carbamoyl-phosphate synthase subunit L 1269084 4080447 Sala_1223 Sphingopyxis alaskensis RB2256 carbamoyl-phosphate synthase subunit L YP_616271.1 1267078 D 317655 CDS YP_616272.1 103486711 4080448 1269203..1269574 1 NC_008048.1 secretion chaperone CsaA 1269574 4080448 Sala_1224 Sphingopyxis alaskensis RB2256 secretion chaperone CsaA YP_616272.1 1269203 D 317655 CDS YP_616273.1 103486712 4080449 complement(1269784..1270572) 1 NC_008048.1 putative cyclase 1270572 4080449 Sala_1225 Sphingopyxis alaskensis RB2256 putative cyclase YP_616273.1 1269784 R 317655 CDS YP_616274.1 103486713 4080450 1270779..1272422 1 NC_008048.1 major facilitator superfamily transporter 1272422 4080450 Sala_1226 Sphingopyxis alaskensis RB2256 major facilitator superfamily transporter YP_616274.1 1270779 D 317655 CDS YP_616275.1 103486714 4080451 1272468..1273514 1 NC_008048.1 alanine racemase 1273514 4080451 Sala_1227 Sphingopyxis alaskensis RB2256 alanine racemase YP_616275.1 1272468 D 317655 CDS YP_616276.1 103486715 4080452 complement(1273585..1276758) 1 NC_008048.1 TonB-dependent receptor 1276758 4080452 Sala_1228 Sphingopyxis alaskensis RB2256 TonB-dependent receptor YP_616276.1 1273585 R 317655 CDS YP_616277.1 103486716 4080453 1277280..1277813 1 NC_008048.1 polyhydroxyalkonate synthesis repressor PhaR 1277813 4080453 Sala_1229 Sphingopyxis alaskensis RB2256 polyhydroxyalkonate synthesis repressor PhaR YP_616277.1 1277280 D 317655 CDS YP_616278.1 103486717 4080454 1277797..1279380 1 NC_008048.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 1279380 4080454 Sala_1230 Sphingopyxis alaskensis RB2256 prolyl-tRNA synthetase YP_616278.1 1277797 D 317655 CDS YP_616279.1 103486718 4080455 1279381..1281681 1 NC_008048.1 ribonuclease R 1281681 4080455 Sala_1231 Sphingopyxis alaskensis RB2256 ribonuclease R YP_616279.1 1279381 D 317655 CDS YP_616280.1 103486719 4080456 complement(1281819..1282604) 1 NC_008048.1 XRE family transcriptional regulator 1282604 4080456 Sala_1232 Sphingopyxis alaskensis RB2256 XRE family transcriptional regulator YP_616280.1 1281819 R 317655 CDS YP_616281.1 103486720 4080304 1282660..1283115 1 NC_008048.1 hypothetical protein 1283115 4080304 Sala_1233 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616281.1 1282660 D 317655 CDS YP_616282.1 103486721 4080305 complement(1283124..1283579) 1 NC_008048.1 universal stress protein UspA and related nucleotide-binding protein 1283579 4080305 Sala_1234 Sphingopyxis alaskensis RB2256 universal stress protein UspA and related nucleotide-binding protein YP_616282.1 1283124 R 317655 CDS YP_616283.1 103486722 4080306 1283738..1285048 1 NC_008048.1 dihydrolipoamide acetyltransferase 1285048 4080306 Sala_1235 Sphingopyxis alaskensis RB2256 dihydrolipoamide acetyltransferase YP_616283.1 1283738 D 317655 CDS YP_616284.1 103486723 4080307 1285050..1285577 1 NC_008048.1 hypothetical protein 1285577 4080307 Sala_1236 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616284.1 1285050 D 317655 CDS YP_616285.1 103486724 4080308 1285570..1286967 1 NC_008048.1 dihydrolipoamide dehydrogenase 1286967 4080308 Sala_1237 Sphingopyxis alaskensis RB2256 dihydrolipoamide dehydrogenase YP_616285.1 1285570 D 317655 CDS YP_616286.1 103486725 4080309 1287056..1288390 1 NC_008048.1 amidohydrolase 1288390 4080309 Sala_1238 Sphingopyxis alaskensis RB2256 amidohydrolase YP_616286.1 1287056 D 317655 CDS YP_616287.1 103486726 4080310 complement(1288489..1289274) 1 NC_008048.1 protein tyrosine/serine phosphatase 1289274 4080310 Sala_1239 Sphingopyxis alaskensis RB2256 protein tyrosine/serine phosphatase YP_616287.1 1288489 R 317655 CDS YP_616288.1 103486727 4080311 1289343..1291265 1 NC_008048.1 acyl-CoA dehydrogenase-like protein 1291265 4080311 Sala_1240 Sphingopyxis alaskensis RB2256 acyl-CoA dehydrogenase-like protein YP_616288.1 1289343 D 317655 CDS YP_616289.1 103486728 4080312 1291442..1291957 1 NC_008048.1 acyl-CoA dehydrogenase-like protein 1291957 4080312 Sala_1241 Sphingopyxis alaskensis RB2256 acyl-CoA dehydrogenase-like protein YP_616289.1 1291442 D 317655 CDS YP_616290.1 103486729 4080313 complement(1292041..1293171) 1 NC_008048.1 L-carnitine dehydratase/bile acid-inducible protein F 1293171 4080313 Sala_1242 Sphingopyxis alaskensis RB2256 L-carnitine dehydratase/bile acid-inducible protein F YP_616290.1 1292041 R 317655 CDS YP_616291.1 103486730 4080314 1293266..1294603 1 NC_008048.1 hypothetical protein 1294603 4080314 Sala_1243 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616291.1 1293266 D 317655 CDS YP_616292.1 103486731 4080315 complement(1294604..1295851) 1 NC_008048.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 1295851 4080315 Sala_1244 Sphingopyxis alaskensis RB2256 acetyl-CoA acetyltransferase YP_616292.1 1294604 R 317655 CDS YP_616293.1 103486732 4080316 complement(1295876..1296658) 1 NC_008048.1 short-chain dehydrogenase/reductase SDR 1296658 4080316 Sala_1245 Sphingopyxis alaskensis RB2256 short-chain dehydrogenase/reductase SDR YP_616293.1 1295876 R 317655 CDS YP_616294.1 103486733 4080317 complement(1296672..1297826) 1 NC_008048.1 acyl-CoA dehydrogenase-like protein 1297826 4080317 Sala_1246 Sphingopyxis alaskensis RB2256 acyl-CoA dehydrogenase-like protein YP_616294.1 1296672 R 317655 CDS YP_616295.1 103486734 4080318 complement(1297874..1298968) 1 NC_008048.1 acyl-CoA dehydrogenase-like protein 1298968 4080318 Sala_1247 Sphingopyxis alaskensis RB2256 acyl-CoA dehydrogenase-like protein YP_616295.1 1297874 R 317655 CDS YP_616296.1 103486735 4080319 1299091..1300071 1 NC_008048.1 2-nitropropane dioxygenase 1300071 4080319 Sala_1248 Sphingopyxis alaskensis RB2256 2-nitropropane dioxygenase YP_616296.1 1299091 D 317655 CDS YP_616297.1 103486736 4080320 complement(1300431..1302407) 1 NC_008048.1 hypothetical protein 1302407 4080320 Sala_1249 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616297.1 1300431 R 317655 CDS YP_616298.1 103486737 4080321 complement(1302473..1303240) 1 NC_008048.1 IstB-like ATP-binding protein 1303240 4080321 Sala_1250 Sphingopyxis alaskensis RB2256 IstB-like ATP-binding protein YP_616298.1 1302473 R 317655 CDS YP_616299.1 103486738 4080322 complement(1303230..1304759) 1 NC_008048.1 integrase catalytic subunit 1304759 4080322 Sala_1251 Sphingopyxis alaskensis RB2256 integrase catalytic subunit YP_616299.1 1303230 R 317655 CDS YP_616300.1 103486739 4080323 complement(1304845..1305270) 1 NC_008048.1 putative transmembrane protein 1305270 4080323 Sala_1252 Sphingopyxis alaskensis RB2256 putative transmembrane protein YP_616300.1 1304845 R 317655 CDS YP_616301.1 103486740 4080269 1306740..1307804 1 NC_008048.1 lytic murein transglycosylase 1307804 4080269 Sala_1254 Sphingopyxis alaskensis RB2256 lytic murein transglycosylase YP_616301.1 1306740 D 317655 CDS YP_616302.1 103486741 4080270 1307788..1308750 1 NC_008048.1 rare lipoprotein A 1308750 4080270 Sala_1255 Sphingopyxis alaskensis RB2256 rare lipoprotein A YP_616302.1 1307788 D 317655 CDS YP_616303.1 103486742 4080271 1308924..1309745 1 NC_008048.1 serine-type D-Ala-D-Ala carboxypeptidase 1309745 4080271 Sala_1256 Sphingopyxis alaskensis RB2256 serine-type D-Ala-D-Ala carboxypeptidase YP_616303.1 1308924 D 317655 CDS YP_616304.1 103486743 4080272 1309822..1310445 1 NC_008048.1 thymidylate kinase 1310445 4080272 Sala_1257 Sphingopyxis alaskensis RB2256 thymidylate kinase YP_616304.1 1309822 D 317655 CDS YP_616305.1 103486744 4080273 1310442..1311422 1 NC_008048.1 DNA-directed DNA polymerase 1311422 4080273 Sala_1258 Sphingopyxis alaskensis RB2256 DNA-directed DNA polymerase YP_616305.1 1310442 D 317655 CDS YP_616306.1 103486745 4080274 1311461..1313044 1 NC_008048.1 methionyl-tRNA synthetase 1313044 4080274 Sala_1259 Sphingopyxis alaskensis RB2256 methionyl-tRNA synthetase YP_616306.1 1311461 D 317655 CDS YP_616307.1 103486746 4080275 1313044..1313820 1 NC_008048.1 TatD-related deoxyribonuclease 1313820 4080275 Sala_1260 Sphingopyxis alaskensis RB2256 TatD-related deoxyribonuclease YP_616307.1 1313044 D 317655 CDS YP_616308.1 103486747 4080276 1313834..1314598 1 NC_008048.1 beta-lactamase-like protein 1314598 4080276 Sala_1261 Sphingopyxis alaskensis RB2256 beta-lactamase-like protein YP_616308.1 1313834 D 317655 CDS YP_616309.1 103486748 4080277 1314967..1315548 1 NC_008048.1 response regulator receiver/ANTAR domain-containing protein 1315548 4080277 Sala_1262 Sphingopyxis alaskensis RB2256 response regulator receiver/ANTAR domain-containing protein YP_616309.1 1314967 D 317655 CDS YP_616310.1 103486749 4080278 1315545..1316756 1 NC_008048.1 nitrate transporter component, nrtA 1316756 4080278 Sala_1263 Sphingopyxis alaskensis RB2256 nitrate transporter component, nrtA YP_616310.1 1315545 D 317655 CDS YP_616311.1 103486750 4080279 1317017..1318252 1 NC_008048.1 major facilitator superfamily transporter 1318252 4080279 Sala_1264 Sphingopyxis alaskensis RB2256 major facilitator superfamily transporter YP_616311.1 1317017 D 317655 CDS YP_616312.1 103486751 4080280 1318255..1319457 1 NC_008048.1 putative lipoprotein 1319457 4080280 Sala_1265 Sphingopyxis alaskensis RB2256 putative lipoprotein YP_616312.1 1318255 D 317655 CDS YP_616313.1 103486752 4080281 1319457..1321934 1 NC_008048.1 nitrite reductase (NAD(P)H) large subunit, NirB 1321934 4080281 Sala_1266 Sphingopyxis alaskensis RB2256 nitrite reductase (NAD(P)H) large subunit, NirB YP_616313.1 1319457 D 317655 CDS YP_616314.1 103486753 4080282 1321931..1322275 1 NC_008048.1 nitrite reductase (NAD(P)H) large subunit, NirD 1322275 4080282 Sala_1267 Sphingopyxis alaskensis RB2256 nitrite reductase (NAD(P)H) large subunit, NirD YP_616314.1 1321931 D 317655 CDS YP_616315.1 103486754 4080283 1322376..1325030 1 NC_008048.1 molybdopterin oxidoreductase 1325030 4080283 Sala_1268 Sphingopyxis alaskensis RB2256 molybdopterin oxidoreductase YP_616315.1 1322376 D 317655 CDS YP_616316.1 103486755 4080284 1325020..1325796 1 NC_008048.1 uroporphyrin-III C-methyltransferase 1325796 4080284 Sala_1269 Sphingopyxis alaskensis RB2256 uroporphyrin-III C-methyltransferase YP_616316.1 1325020 D 317655 CDS YP_616317.1 103486756 4082521 1325959..1326732 1 NC_008048.1 MazG family protein 1326732 4082521 Sala_1270 Sphingopyxis alaskensis RB2256 MazG family protein YP_616317.1 1325959 D 317655 CDS YP_616318.1 103486757 4082522 complement(1326710..1328008) 1 NC_008048.1 HSR1-like GTP-binding protein 1328008 4082522 Sala_1271 Sphingopyxis alaskensis RB2256 HSR1-like GTP-binding protein YP_616318.1 1326710 R 317655 CDS YP_616319.1 103486758 4082523 complement(1328059..1328649) 1 NC_008048.1 stimulates the elongation of poly(A) tails; RNA-binding protein Hfq 1328649 hfq 4082523 hfq Sphingopyxis alaskensis RB2256 RNA-binding protein Hfq YP_616319.1 1328059 R 317655 CDS YP_616320.1 103486759 4082524 complement(1328670..1330055) 1 NC_008048.1 two component, sigma54 specific, Fis family transcriptional regulator 1330055 4082524 Sala_1273 Sphingopyxis alaskensis RB2256 two component, sigma54 specific, Fis family transcriptional regulator YP_616320.1 1328670 R 317655 CDS YP_616321.1 103486760 4082525 complement(1330045..1332366) 1 NC_008048.1 multi-sensor signal transduction histidine kinase 1332366 4082525 Sala_1274 Sphingopyxis alaskensis RB2256 multi-sensor signal transduction histidine kinase YP_616321.1 1330045 R 317655 CDS YP_616322.1 103486761 4082526 complement(1332420..1333838) 1 NC_008048.1 two component, sigma54 specific, Fis family transcriptional regulator 1333838 4082526 Sala_1275 Sphingopyxis alaskensis RB2256 two component, sigma54 specific, Fis family transcriptional regulator YP_616322.1 1332420 R 317655 CDS YP_616323.1 103486762 4082527 complement(1333835..1334926) 1 NC_008048.1 signal transduction histidine kinase, nitrogen specific, NtrB 1334926 4082527 Sala_1276 Sphingopyxis alaskensis RB2256 signal transduction histidine kinase, nitrogen specific, NtrB YP_616323.1 1333835 R 317655 CDS YP_616324.1 103486763 4082528 complement(1334923..1335921) 1 NC_008048.1 dihydrouridine synthase TIM-barrel protein nifR3 1335921 4082528 Sala_1277 Sphingopyxis alaskensis RB2256 dihydrouridine synthase TIM-barrel protein nifR3 YP_616324.1 1334923 R 317655 CDS YP_616325.1 103486764 4082529 1336018..1337196 1 NC_008048.1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 1337196 4082529 Sala_1278 Sphingopyxis alaskensis RB2256 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_616325.1 1336018 D 317655 CDS YP_616326.1 103486765 4082530 1337201..1337758 1 NC_008048.1 CinA-like protein 1337758 4082530 Sala_1279 Sphingopyxis alaskensis RB2256 CinA-like protein YP_616326.1 1337201 D 317655 CDS YP_616327.1 103486766 4082531 complement(1337701..1338180) 1 NC_008048.1 cyclase/dehydrase 1338180 4082531 Sala_1280 Sphingopyxis alaskensis RB2256 cyclase/dehydrase YP_616327.1 1337701 R 317655 CDS YP_616328.1 103486767 4082532 complement(1338188..1339123) 1 NC_008048.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 1339123 4082532 Sala_1281 Sphingopyxis alaskensis RB2256 lipoyl synthase YP_616328.1 1338188 R 317655 CDS YP_616329.1 103486768 4082533 1339186..1339827 1 NC_008048.1 carbonate dehydratase 1339827 4082533 Sala_1282 Sphingopyxis alaskensis RB2256 carbonate dehydratase YP_616329.1 1339186 D 317655 CDS YP_616330.1 103486769 4082534 complement(1339832..1340275) 1 NC_008048.1 thioesterase superfamily protein 1340275 4082534 Sala_1283 Sphingopyxis alaskensis RB2256 thioesterase superfamily protein YP_616330.1 1339832 R 317655 CDS YP_616331.1 103486770 4082535 complement(1340281..1342293) 1 NC_008048.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; putative ABC transporter ATP-binding protein 1342293 4082535 Sala_1284 Sphingopyxis alaskensis RB2256 putative ABC transporter ATP-binding protein YP_616331.1 1340281 R 317655 CDS YP_616332.1 103486771 4082536 1342399..1342668 1 NC_008048.1 hypothetical protein 1342668 4082536 Sala_1285 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616332.1 1342399 D 317655 CDS YP_616333.1 103486772 4082578 complement(1343619..1344641) 1 NC_008048.1 group 1 glycosyl transferase 1344641 4082578 Sala_1286 Sphingopyxis alaskensis RB2256 group 1 glycosyl transferase YP_616333.1 1343619 R 317655 CDS YP_616334.1 103486773 4082579 complement(1344670..1346292) 1 NC_008048.1 histidine kinase A-like protein 1346292 4082579 Sala_1287 Sphingopyxis alaskensis RB2256 histidine kinase A-like protein YP_616334.1 1344670 R 317655 CDS YP_616335.1 103486774 4082580 1346471..1346944 1 NC_008048.1 AsnC family transcriptional regulator 1346944 4082580 Sala_1288 Sphingopyxis alaskensis RB2256 AsnC family transcriptional regulator YP_616335.1 1346471 D 317655 CDS YP_616336.1 103486775 4082581 complement(1347013..1348293) 1 NC_008048.1 hypothetical protein 1348293 4082581 Sala_1289 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616336.1 1347013 R 317655 CDS YP_616337.1 103486776 4082582 complement(1348456..1348752) 1 NC_008048.1 hypothetical protein 1348752 4082582 Sala_1290 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616337.1 1348456 R 317655 CDS YP_616338.1 103486777 4082583 1348822..1351185 1 NC_008048.1 hypothetical protein 1351185 4082583 Sala_1291 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616338.1 1348822 D 317655 CDS YP_616339.1 103486778 4082584 complement(1351474..1351734) 1 NC_008048.1 hypothetical protein 1351734 4082584 Sala_1292 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616339.1 1351474 R 317655 CDS YP_616340.1 103486779 4082585 complement(1351745..1353379) 1 NC_008048.1 beta-lactamase-like protein 1353379 4082585 Sala_1293 Sphingopyxis alaskensis RB2256 beta-lactamase-like protein YP_616340.1 1351745 R 317655 CDS YP_616341.1 103486780 4082586 complement(1353376..1354161) 1 NC_008048.1 type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase 1354161 4082586 Sala_1294 Sphingopyxis alaskensis RB2256 pantothenate kinase YP_616341.1 1353376 R 317655 CDS YP_616342.1 103486781 4082587 complement(1354166..1354966) 1 NC_008048.1 biotin--acetyl-CoA-carboxylase ligase 1354966 4082587 Sala_1295 Sphingopyxis alaskensis RB2256 biotin--acetyl-CoA-carboxylase ligase YP_616342.1 1354166 R 317655 CDS YP_616343.1 103486782 4082588 complement(1354888..1356318) 1 NC_008048.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit N 1356318 4082588 Sala_1296 Sphingopyxis alaskensis RB2256 NADH dehydrogenase subunit N YP_616343.1 1354888 R 317655 CDS YP_616344.1 103486783 4082589 complement(1356315..1357868) 1 NC_008048.1 proton-translocating NADH-quinone oxidoreductase subunit M 1357868 4082589 Sala_1297 Sphingopyxis alaskensis RB2256 proton-translocating NADH-quinone oxidoreductase subunit M YP_616344.1 1356315 R 317655 CDS YP_616345.1 103486784 4082590 complement(1357865..1359910) 1 NC_008048.1 Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L 1359910 4082590 Sala_1298 Sphingopyxis alaskensis RB2256 NADH dehydrogenase subunit L YP_616345.1 1357865 R 317655 CDS YP_616346.1 103486785 4082591 complement(1359915..1360220) 1 NC_008048.1 NADH-ubiquinone oxidoreductase, chain 4L 1360220 4082591 Sala_1299 Sphingopyxis alaskensis RB2256 NADH-ubiquinone oxidoreductase, chain 4L YP_616346.1 1359915 R 317655 CDS YP_616347.1 103486786 4082592 complement(1360351..1360962) 1 NC_008048.1 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 1360962 4082592 Sala_1300 Sphingopyxis alaskensis RB2256 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 YP_616347.1 1360351 R 317655 CDS YP_616348.1 103486787 4082593 complement(1360975..1361463) 1 NC_008048.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 1361463 4082593 Sala_1301 Sphingopyxis alaskensis RB2256 NADH dehydrogenase subunit I YP_616348.1 1360975 R 317655 CDS YP_616349.1 103486788 4082594 complement(1361460..1362503) 1 NC_008048.1 respiratory-chain NADH dehydrogenase subunit 1 1362503 4082594 Sala_1302 Sphingopyxis alaskensis RB2256 respiratory-chain NADH dehydrogenase subunit 1 YP_616349.1 1361460 R 317655 CDS YP_616350.1 103486789 4082595 complement(1362724..1364736) 1 NC_008048.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit G 1364736 4082595 Sala_1303 Sphingopyxis alaskensis RB2256 NADH dehydrogenase subunit G YP_616350.1 1362724 R 317655 CDS YP_616351.1 103486790 4082596 complement(1364739..1365443) 1 NC_008048.1 hypothetical protein 1365443 4082596 Sala_1304 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616351.1 1364739 R 317655 CDS YP_616352.1 103486791 4082229 complement(1365440..1366732) 1 NC_008048.1 part of NADH-ubiquinone oxidoreductase complex I; shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase; NADH dehydrogenase I subunit F 1366732 4082229 Sala_1305 Sphingopyxis alaskensis RB2256 NADH dehydrogenase I subunit F YP_616352.1 1365440 R 317655 CDS YP_616353.1 103486792 4082230 complement(1366845..1367513) 1 NC_008048.1 NADH-quinone oxidoreductase subunit E 1367513 4082230 Sala_1306 Sphingopyxis alaskensis RB2256 NADH-quinone oxidoreductase subunit E YP_616353.1 1366845 R 317655 CDS YP_616354.1 103486793 4082231 complement(1367513..1367794) 1 NC_008048.1 hypothetical protein 1367794 4082231 Sala_1307 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616354.1 1367513 R 317655 CDS YP_616355.1 103486794 4082232 complement(1367791..1369047) 1 NC_008048.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit D 1369047 4082232 Sala_1308 Sphingopyxis alaskensis RB2256 NADH dehydrogenase subunit D YP_616355.1 1367791 R 317655 CDS YP_616356.1 103486795 4082233 complement(1369044..1369868) 1 NC_008048.1 NADH (or F420H2) dehydrogenase subunit C 1369868 4082233 Sala_1309 Sphingopyxis alaskensis RB2256 NADH (or F420H2) dehydrogenase subunit C YP_616356.1 1369044 R 317655 CDS YP_616357.1 103486796 4082234 complement(1369943..1370476) 1 NC_008048.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 1370476 4082234 Sala_1310 Sphingopyxis alaskensis RB2256 NADH dehydrogenase subunit B YP_616357.1 1369943 R 317655 CDS YP_616358.1 103486797 4082235 complement(1370494..1370868) 1 NC_008048.1 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 1370868 4082235 Sala_1311 Sphingopyxis alaskensis RB2256 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 YP_616358.1 1370494 R 317655 CDS YP_616359.1 103486798 4082236 1371097..1371579 1 NC_008048.1 hypothetical protein 1371579 4082236 Sala_1312 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616359.1 1371097 D 317655 CDS YP_616360.1 103486799 4082237 complement(1371634..1372452) 1 NC_008048.1 inositol-1(or 4)-monophosphatase 1372452 4082237 Sala_1313 Sphingopyxis alaskensis RB2256 inositol-1(or 4)-monophosphatase YP_616360.1 1371634 R 317655 CDS YP_616361.1 103486800 4082238 complement(1372574..1373137) 1 NC_008048.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 1373137 4082238 Sala_1314 Sphingopyxis alaskensis RB2256 elongation factor P YP_616361.1 1372574 R 317655 CDS YP_616362.1 103486801 4082239 complement(1373496..1374146) 1 NC_008048.1 thiamine-phosphate pyrophosphorylase 1374146 4082239 Sala_1315 Sphingopyxis alaskensis RB2256 thiamine-phosphate pyrophosphorylase YP_616362.1 1373496 R 317655 CDS YP_616363.1 103486802 4082240 1374254..1374580 1 NC_008048.1 hypothetical protein 1374580 4082240 Sala_1316 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616363.1 1374254 D 317655 CDS YP_616364.1 103486803 4082241 complement(1374647..1375537) 1 NC_008048.1 catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate in glycolysis; fructose-1,6-bisphosphate aldolase 1375537 4082241 Sala_1317 Sphingopyxis alaskensis RB2256 fructose-1,6-bisphosphate aldolase YP_616364.1 1374647 R 317655 CDS YP_616365.1 103486804 4082242 complement(1375616..1376812) 1 NC_008048.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 1376812 pgk 4082242 pgk Sphingopyxis alaskensis RB2256 phosphoglycerate kinase YP_616365.1 1375616 R 317655 CDS YP_616366.1 103486805 4082243 complement(1376952..1377959) 1 NC_008048.1 glyceraldehyde-3-phosphate dehydrogenase, type I 1377959 4082243 Sala_1319 Sphingopyxis alaskensis RB2256 glyceraldehyde-3-phosphate dehydrogenase, type I YP_616366.1 1376952 R 317655 CDS YP_616367.1 103486806 4082244 complement(1377996..1379978) 1 NC_008048.1 transketolase 1379978 4082244 Sala_1320 Sphingopyxis alaskensis RB2256 transketolase YP_616367.1 1377996 R 317655 CDS YP_616368.1 103486807 4082245 1380334..1380780 1 NC_008048.1 hypothetical protein 1380780 4082245 Sala_1321 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616368.1 1380334 D 317655 CDS YP_616369.1 103486808 4082246 1381000..1381593 1 NC_008048.1 5-formyltetrahydrofolate cyclo-ligase 1381593 4082246 Sala_1322 Sphingopyxis alaskensis RB2256 5-formyltetrahydrofolate cyclo-ligase YP_616369.1 1381000 D 317655 CDS YP_616370.1 103486809 4082247 1381590..1381820 1 NC_008048.1 hypothetical protein 1381820 4082247 Sala_1323 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616370.1 1381590 D 317655 CDS YP_616371.1 103486810 4080995 complement(1382021..1383247) 1 NC_008048.1 hypothetical protein 1383247 4080995 Sala_1324 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616371.1 1382021 R 317655 CDS YP_616372.1 103486811 4080996 1383416..1384417 1 NC_008048.1 hypothetical protein 1384417 4080996 Sala_1325 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616372.1 1383416 D 317655 CDS YP_616373.1 103486812 4080997 1384429..1384893 1 NC_008048.1 hypothetical protein 1384893 4080997 Sala_1326 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616373.1 1384429 D 317655 CDS YP_616374.1 103486813 4080998 1384969..1386033 1 NC_008048.1 hypothetical protein 1386033 4080998 Sala_1327 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616374.1 1384969 D 317655 CDS YP_616375.1 103486814 4080999 1386101..1391209 1 NC_008048.1 hypothetical protein 1391209 4080999 Sala_1328 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616375.1 1386101 D 317655 CDS YP_616376.1 103486815 4081000 complement(1391318..1392643) 1 NC_008048.1 branched-chain alpha-keto acid dehydrogenase subunit E2 1392643 4081000 Sala_1329 Sphingopyxis alaskensis RB2256 branched-chain alpha-keto acid dehydrogenase subunit E2 YP_616376.1 1391318 R 317655 CDS YP_616377.1 103486816 4081001 complement(1392648..1393679) 1 NC_008048.1 transketolase, central region 1393679 4081001 Sala_1330 Sphingopyxis alaskensis RB2256 transketolase, central region YP_616377.1 1392648 R 317655 CDS YP_616378.1 103486817 4081002 complement(1393679..1394989) 1 NC_008048.1 3-methyl-2-oxobutanoate dehydrogenase 1394989 4081002 Sala_1331 Sphingopyxis alaskensis RB2256 3-methyl-2-oxobutanoate dehydrogenase YP_616378.1 1393679 R 317655 CDS YP_616379.1 103486818 4081003 complement(1395082..1396044) 1 NC_008048.1 thymidylate synthase 1396044 4081003 Sala_1332 Sphingopyxis alaskensis RB2256 thymidylate synthase YP_616379.1 1395082 R 317655 CDS YP_616380.1 103486819 4081004 1396044..1396589 1 NC_008048.1 DNA repair protein RadC 1396589 4081004 Sala_1333 Sphingopyxis alaskensis RB2256 DNA repair protein RadC YP_616380.1 1396044 D 317655 CDS YP_616381.1 103486820 4081006 complement(1396958..1397833) 1 NC_008048.1 N-formylglutamate amidohydrolase 1397833 4081006 Sala_1334 Sphingopyxis alaskensis RB2256 N-formylglutamate amidohydrolase YP_616381.1 1396958 R 317655 CDS YP_616382.1 103486821 4081007 1397974..1398351 1 NC_008048.1 response regulator receiver protein 1398351 4081007 Sala_1335 Sphingopyxis alaskensis RB2256 response regulator receiver protein YP_616382.1 1397974 D 317655 CDS YP_616383.1 103486822 4081009 complement(1398541..1399332) 1 NC_008048.1 short chain dehydrogenase 1399332 4081009 Sala_1336 Sphingopyxis alaskensis RB2256 short chain dehydrogenase YP_616383.1 1398541 R 317655 CDS YP_616384.1 103486823 4081010 1399441..1400310 1 NC_008048.1 alpha/beta hydrolase 1400310 4081010 Sala_1337 Sphingopyxis alaskensis RB2256 alpha/beta hydrolase YP_616384.1 1399441 D 317655 CDS YP_616385.1 103486824 4082805 1400358..1401074 1 NC_008048.1 TonB-like protein 1401074 4082805 Sala_1338 Sphingopyxis alaskensis RB2256 TonB-like protein YP_616385.1 1400358 D 317655 CDS YP_616386.1 103486825 4082807 complement(1401179..1401436) 1 NC_008048.1 hypothetical protein 1401436 4082807 Sala_1339 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616386.1 1401179 R 317655 CDS YP_616387.1 103486826 4082808 1401436..1402215 1 NC_008048.1 hypothetical protein 1402215 4082808 Sala_1340 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616387.1 1401436 D 317655 CDS YP_616388.1 103486827 4082809 complement(1402346..1402705) 1 NC_008048.1 hypothetical protein 1402705 4082809 Sala_1341 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616388.1 1402346 R 317655 CDS YP_616389.1 103486828 4082810 complement(1402686..1403240) 1 NC_008048.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 1403240 4082810 Sala_1342 Sphingopyxis alaskensis RB2256 adenine phosphoribosyltransferase YP_616389.1 1402686 R 317655 CDS YP_616390.1 103486829 4082811 complement(1403264..1404073) 1 NC_008048.1 cytochrome c1 1404073 4082811 Sala_1343 Sphingopyxis alaskensis RB2256 cytochrome c1 YP_616390.1 1403264 R 317655 CDS YP_616391.1 103486830 4082812 complement(1404105..1405385) 1 NC_008048.1 cytochrome b/b6-like protein 1405385 4082812 Sala_1344 Sphingopyxis alaskensis RB2256 cytochrome b/b6-like protein YP_616391.1 1404105 R 317655 CDS YP_616392.1 103486831 4082813 complement(1405399..1405956) 1 NC_008048.1 ubiquinol-cytochrome c reductase, iron-sulfur subunit 1405956 4082813 Sala_1345 Sphingopyxis alaskensis RB2256 ubiquinol-cytochrome c reductase, iron-sulfur subunit YP_616392.1 1405399 R 317655 CDS YP_616393.1 103486832 4082814 1406180..1406638 1 NC_008048.1 tRNA/rRNA methyltransferase SpoU 1406638 4082814 Sala_1346 Sphingopyxis alaskensis RB2256 tRNA/rRNA methyltransferase SpoU YP_616393.1 1406180 D 317655 CDS YP_616394.1 103486833 4082815 1406635..1407495 1 NC_008048.1 catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase 1407495 4082815 Sala_1347 Sphingopyxis alaskensis RB2256 coproporphyrinogen III oxidase YP_616394.1 1406635 D 317655 CDS YP_616395.1 103486834 4082816 complement(1407547..1408428) 1 NC_008048.1 hypothetical protein 1408428 4082816 Sala_1348 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616395.1 1407547 R 317655 CDS YP_616396.1 103486835 4082817 complement(1408534..1409280) 1 NC_008048.1 hypothetical protein 1409280 4082817 Sala_1349 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616396.1 1408534 R 317655 CDS YP_616397.1 103486836 4082818 1409413..1410066 1 NC_008048.1 lipoate-protein ligase B 1410066 4082818 Sala_1350 Sphingopyxis alaskensis RB2256 lipoate-protein ligase B YP_616397.1 1409413 D 317655 CDS YP_616398.1 103486837 4082819 1410076..1410420 1 NC_008048.1 hypothetical protein 1410420 4082819 Sala_1351 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616398.1 1410076 D 317655 CDS YP_616399.1 103486838 4082820 complement(1410446..1410940) 1 NC_008048.1 transposase, IS4 1410940 4082820 Sala_1352 Sphingopyxis alaskensis RB2256 transposase, IS4 YP_616399.1 1410446 R 317655 CDS YP_616400.1 103486839 4082821 1411338..1412288 1 NC_008048.1 integrase catalytic subunit 1412288 4082821 Sala_1353 Sphingopyxis alaskensis RB2256 integrase catalytic subunit YP_616400.1 1411338 D 317655 CDS YP_616401.1 103486840 4082822 complement(1412285..1412917) 1 NC_008048.1 hypothetical protein 1412917 4082822 Sala_1354 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616401.1 1412285 R 317655 CDS YP_616402.1 103486841 4081920 complement(1412922..1413605) 1 NC_008048.1 ExsB protein 1413605 4081920 Sala_1355 Sphingopyxis alaskensis RB2256 ExsB protein YP_616402.1 1412922 R 317655 CDS YP_616403.1 103486842 4081921 complement(1413780..1414205) 1 NC_008048.1 hypothetical protein 1414205 4081921 Sala_1356 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616403.1 1413780 R 317655 CDS YP_616404.1 103486843 4081922 complement(1414316..1415161) 1 NC_008048.1 Hsp33 protein 1415161 4081922 Sala_1357 Sphingopyxis alaskensis RB2256 Hsp33 protein YP_616404.1 1414316 R 317655 CDS YP_616405.1 103486844 4081923 complement(1415250..1416173) 1 NC_008048.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 1416173 4081923 Sala_1358 Sphingopyxis alaskensis RB2256 ornithine carbamoyltransferase YP_616405.1 1415250 R 317655 CDS YP_616406.1 103486845 4081924 complement(1416274..1417461) 1 NC_008048.1 DapATase; functions in arginine biosynthetic pathway; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine transaminase protein 1417461 argD 4081924 argD Sphingopyxis alaskensis RB2256 acetylornithine transaminase protein YP_616406.1 1416274 R 317655 CDS YP_616407.1 103486846 4081925 complement(1417569..1418606) 1 NC_008048.1 luciferase-like protein 1418606 4081925 Sala_1360 Sphingopyxis alaskensis RB2256 luciferase-like protein YP_616407.1 1417569 R 317655 CDS YP_616408.1 103486847 4081926 complement(1418635..1419138) 1 NC_008048.1 AsnC family transcriptional regulator 1419138 4081926 Sala_1361 Sphingopyxis alaskensis RB2256 AsnC family transcriptional regulator YP_616408.1 1418635 R 317655 CDS YP_616409.1 103486848 4081927 1419161..1419751 1 NC_008048.1 lysine exporter protein LysE/YggA 1419751 4081927 Sala_1362 Sphingopyxis alaskensis RB2256 lysine exporter protein LysE/YggA YP_616409.1 1419161 D 317655 CDS YP_616410.1 103486849 4081928 1419815..1420831 1 NC_008048.1 aldo/keto reductase 1420831 4081928 Sala_1363 Sphingopyxis alaskensis RB2256 aldo/keto reductase YP_616410.1 1419815 D 317655 CDS YP_616411.1 103486850 4081929 1420893..1421360 1 NC_008048.1 hypothetical protein 1421360 4081929 Sala_1364 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616411.1 1420893 D 317655 CDS YP_616412.1 103486851 4081930 complement(1421417..1422304) 1 NC_008048.1 dienelactone hydrolase 1422304 4081930 Sala_1365 Sphingopyxis alaskensis RB2256 dienelactone hydrolase YP_616412.1 1421417 R 317655 CDS YP_616413.1 103486852 4081931 complement(1422511..1424334) 1 NC_008048.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 1424334 4081931 Sala_1366 Sphingopyxis alaskensis RB2256 glucosamine--fructose-6-phosphate aminotransferase YP_616413.1 1422511 R 317655 CDS YP_616414.1 103486853 4081932 complement(1424353..1424733) 1 NC_008048.1 PilT protein-like protein 1424733 4081932 Sala_1367 Sphingopyxis alaskensis RB2256 PilT protein-like protein YP_616414.1 1424353 R 317655 CDS YP_616415.1 103486854 4081933 complement(1424774..1425076) 1 NC_008048.1 hypothetical protein 1425076 4081933 Sala_1368 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616415.1 1424774 R 317655 CDS YP_616416.1 103486855 4081934 complement(1425136..1425450) 1 NC_008048.1 hypothetical protein 1425450 4081934 Sala_1369 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616416.1 1425136 R 317655 CDS YP_616417.1 103486856 4081935 complement(1425447..1426814) 1 NC_008048.1 forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 1426814 glmU 4081935 glmU Sphingopyxis alaskensis RB2256 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase YP_616417.1 1425447 R 317655 CDS YP_616418.1 103486857 4081936 1426862..1427530 1 NC_008048.1 phosphoglycolate phosphatase 1427530 4081936 Sala_1371 Sphingopyxis alaskensis RB2256 phosphoglycolate phosphatase YP_616418.1 1426862 D 317655 CDS YP_616419.1 103486858 4081937 complement(1427553..1428569) 1 NC_008048.1 hypothetical protein 1428569 4081937 Sala_1372 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616419.1 1427553 R 317655 CDS YP_616420.1 103486859 4081938 complement(1428566..1429558) 1 NC_008048.1 HPr kinase 1429558 4081938 Sala_1373 Sphingopyxis alaskensis RB2256 HPr kinase YP_616420.1 1428566 R 317655 CDS YP_616421.1 103486860 4081939 complement(1429703..1430149) 1 NC_008048.1 MarR family transcriptional regulator 1430149 4081939 Sala_1374 Sphingopyxis alaskensis RB2256 MarR family transcriptional regulator YP_616421.1 1429703 R 317655 CDS YP_616422.1 103486861 4081847 complement(1430216..1432261) 1 NC_008048.1 TonB-dependent receptor 1432261 4081847 Sala_1375 Sphingopyxis alaskensis RB2256 TonB-dependent receptor YP_616422.1 1430216 R 317655 CDS YP_616423.1 103486862 4081848 complement(1432258..1432890) 1 NC_008048.1 maleylacetoacetate isomerase 1432890 4081848 Sala_1376 Sphingopyxis alaskensis RB2256 maleylacetoacetate isomerase YP_616423.1 1432258 R 317655 CDS YP_616424.1 103486863 4081849 complement(1433049..1434080) 1 NC_008048.1 hypothetical protein 1434080 4081849 Sala_1377 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616424.1 1433049 R 317655 CDS YP_616425.1 103486864 4081850 complement(1434077..1435279) 1 NC_008048.1 hypothetical protein 1435279 4081850 Sala_1378 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616425.1 1434077 R 317655 CDS YP_616426.1 103486865 4081851 1435298..1435786 1 NC_008048.1 hypothetical protein 1435786 4081851 Sala_1379 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616426.1 1435298 D 317655 CDS YP_616427.1 103486866 4081852 complement(1435897..1436595) 1 NC_008048.1 aspartate racemase 1436595 4081852 Sala_1380 Sphingopyxis alaskensis RB2256 aspartate racemase YP_616427.1 1435897 R 317655 CDS YP_616428.1 103486867 4081853 complement(1436718..1438199) 1 NC_008048.1 NAD(P) transhydrogenase subunit beta 1438199 4081853 Sala_1381 Sphingopyxis alaskensis RB2256 NAD(P) transhydrogenase subunit beta YP_616428.1 1436718 R 317655 CDS YP_616429.1 103486868 4081854 complement(1438201..1438482) 1 NC_008048.1 NAD(P) transhydrogenase subunit alpha 1438482 4081854 Sala_1382 Sphingopyxis alaskensis RB2256 NAD(P) transhydrogenase subunit alpha YP_616429.1 1438201 R 317655 CDS YP_616430.1 103486869 4081855 1438928..1439830 1 NC_008048.1 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 1439830 4081855 Sala_1383 Sphingopyxis alaskensis RB2256 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_616430.1 1438928 D 317655 CDS YP_616431.1 103486870 4081856 complement(1439837..1440490) 1 NC_008048.1 type IV pilus assembly PilZ 1440490 4081856 Sala_1384 Sphingopyxis alaskensis RB2256 type IV pilus assembly PilZ YP_616431.1 1439837 R 317655 CDS YP_616432.1 103486871 4081857 complement(1440735..1441529) 1 NC_008048.1 Asp/Glu racemase 1441529 4081857 Sala_1385 Sphingopyxis alaskensis RB2256 Asp/Glu racemase YP_616432.1 1440735 R 317655 CDS YP_616433.1 103486872 4081858 complement(1441559..1442467) 1 NC_008048.1 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase 1442467 4081858 Sala_1386 Sphingopyxis alaskensis RB2256 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase YP_616433.1 1441559 R 317655 CDS YP_616434.1 103486873 4081859 complement(1442455..1443594) 1 NC_008048.1 cupin 1443594 4081859 Sala_1387 Sphingopyxis alaskensis RB2256 cupin YP_616434.1 1442455 R 317655 CDS YP_616435.1 103486874 4081860 complement(1443591..1444607) 1 NC_008048.1 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 1444607 4081860 Sala_1388 Sphingopyxis alaskensis RB2256 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_616435.1 1443591 R 317655 CDS YP_616436.1 103486875 4081861 complement(1444604..1445845) 1 NC_008048.1 kynureninase 1445845 4081861 Sala_1389 Sphingopyxis alaskensis RB2256 kynureninase YP_616436.1 1444604 R 317655 CDS YP_616437.1 103486876 4081862 complement(1445842..1446471) 1 NC_008048.1 putative cyclase 1446471 4081862 Sala_1390 Sphingopyxis alaskensis RB2256 putative cyclase YP_616437.1 1445842 R 317655 CDS YP_616438.1 103486877 4081863 complement(1446468..1447373) 1 NC_008048.1 tryptophan 2,3-dioxygenase 1447373 4081863 Sala_1391 Sphingopyxis alaskensis RB2256 tryptophan 2,3-dioxygenase YP_616438.1 1446468 R 317655 CDS YP_616439.1 103486878 4081864 complement(1447370..1448242) 1 NC_008048.1 phenylalanine 4-hydroxylase; phenylalanine 4-hydroxylase; catalyzes the formation of 4a-hydroxytetrahydrobiopterin and tyrosine from phenylalanine and tetrahydrobiopterin; phenylalanine 4-monooxygenase 1448242 phhA 4081864 phhA Sphingopyxis alaskensis RB2256 phenylalanine 4-monooxygenase YP_616439.1 1447370 R 317655 CDS YP_616440.1 103486879 4081865 1448429..1448908 1 NC_008048.1 AsnC family transcriptional regulator 1448908 4081865 Sala_1393 Sphingopyxis alaskensis RB2256 AsnC family transcriptional regulator YP_616440.1 1448429 D 317655 CDS YP_616441.1 103486880 4081750 1449079..1450170 1 NC_008048.1 diguanylate cyclase 1450170 4081750 Sala_1394 Sphingopyxis alaskensis RB2256 diguanylate cyclase YP_616441.1 1449079 D 317655 CDS YP_616442.1 103486881 4081751 complement(1450243..1451538) 1 NC_008048.1 glucose/galactose transporter 1451538 4081751 Sala_1395 Sphingopyxis alaskensis RB2256 glucose/galactose transporter YP_616442.1 1450243 R 317655 CDS YP_616443.1 103486882 4081752 complement(1451701..1452069) 1 NC_008048.1 PRC-barrel protein 1452069 4081752 Sala_1396 Sphingopyxis alaskensis RB2256 PRC-barrel protein YP_616443.1 1451701 R 317655 CDS YP_616444.1 103486883 4081753 complement(1452212..1452970) 1 NC_008048.1 SAM-dependent methyltransferase 1452970 4081753 Sala_1397 Sphingopyxis alaskensis RB2256 SAM-dependent methyltransferase YP_616444.1 1452212 R 317655 CDS YP_616445.1 103486884 4081754 complement(1453095..1454492) 1 NC_008048.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 1454492 4081754 Sala_1398 Sphingopyxis alaskensis RB2256 threonine synthase YP_616445.1 1453095 R 317655 CDS YP_616446.1 103486885 4081755 complement(1454520..1455086) 1 NC_008048.1 SurF1 family protein 1455086 4081755 Sala_1399 Sphingopyxis alaskensis RB2256 SurF1 family protein YP_616446.1 1454520 R 317655 CDS YP_616447.1 103486886 4081756 complement(1455172..1455567) 1 NC_008048.1 hypothetical protein 1455567 4081756 Sala_1400 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616447.1 1455172 R 317655 CDS YP_616448.1 103486887 4081757 complement(1455569..1456444) 1 NC_008048.1 cytochrome c oxidase subunit III 1456444 4081757 Sala_1401 Sphingopyxis alaskensis RB2256 cytochrome c oxidase subunit III YP_616448.1 1455569 R 317655 CDS YP_616449.1 103486888 4081758 complement(1456524..1457084) 1 NC_008048.1 involved in the insertion of copper into subunit I of cytochrome C oxidase; cytochrome C oxidase assembly protein 1457084 4081758 Sala_1402 Sphingopyxis alaskensis RB2256 cytochrome C oxidase assembly protein YP_616449.1 1456524 R 317655 CDS YP_616450.1 103486889 4081759 complement(1457227..1458153) 1 NC_008048.1 converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 1458153 4081759 Sala_1403 Sphingopyxis alaskensis RB2256 protoheme IX farnesyltransferase YP_616450.1 1457227 R 317655 CDS YP_616451.1 103486890 4081760 complement(1458198..1459868) 1 NC_008048.1 cytochrome-c oxidase 1459868 4081760 Sala_1404 Sphingopyxis alaskensis RB2256 cytochrome-c oxidase YP_616451.1 1458198 R 317655 CDS YP_616452.1 103486891 4081761 complement(1459884..1460915) 1 NC_008048.1 cytochrome-c oxidase 1460915 4081761 Sala_1405 Sphingopyxis alaskensis RB2256 cytochrome-c oxidase YP_616452.1 1459884 R 317655 CDS YP_616453.1 103486892 4081762 1461146..1461736 1 NC_008048.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 1461736 pyrE 4081762 pyrE Sphingopyxis alaskensis RB2256 orotate phosphoribosyltransferase YP_616453.1 1461146 D 317655 CDS YP_616454.1 103486893 4081763 1461733..1462479 1 NC_008048.1 involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 1462479 4081763 Sala_1407 Sphingopyxis alaskensis RB2256 pyridoxine 5'-phosphate synthase YP_616454.1 1461733 D 317655 CDS YP_616455.1 103486894 4081764 1462476..1462727 1 NC_008048.1 hypothetical protein 1462727 4081764 Sala_1408 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616455.1 1462476 D 317655 CDS YP_616456.1 103486895 4081765 1462724..1463125 1 NC_008048.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 1463125 acpS 4081765 acpS Sphingopyxis alaskensis RB2256 4'-phosphopantetheinyl transferase YP_616456.1 1462724 D 317655 CDS YP_616457.1 103486896 4081766 1463133..1463969 1 NC_008048.1 peptidase S26A, signal peptidase I 1463969 4081766 Sala_1410 Sphingopyxis alaskensis RB2256 peptidase S26A, signal peptidase I YP_616457.1 1463133 D 317655 CDS YP_616458.1 103486897 4081767 1463987..1465096 1 NC_008048.1 hypothetical protein 1465096 4081767 Sala_1411 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616458.1 1463987 D 317655 CDS YP_616459.1 103486898 4081768 complement(1465186..1465833) 1 NC_008048.1 peptidylprolyl isomerase, FKBP-type 1465833 4081768 Sala_1412 Sphingopyxis alaskensis RB2256 peptidylprolyl isomerase, FKBP-type YP_616459.1 1465186 R 317655 CDS YP_616460.1 103486899 4081769 1465894..1467165 1 NC_008048.1 amidohydrolase 1467165 4081769 Sala_1413 Sphingopyxis alaskensis RB2256 amidohydrolase YP_616460.1 1465894 D 317655 CDS YP_616461.1 103486900 4081731 1467222..1469960 1 NC_008048.1 helicase c2 1469960 4081731 Sala_1414 Sphingopyxis alaskensis RB2256 helicase c2 YP_616461.1 1467222 D 317655 CDS YP_616462.1 103486901 4081732 1470017..1470568 1 NC_008048.1 putative phosphohistidine phosphatase, SixA 1470568 4081732 Sala_1415 Sphingopyxis alaskensis RB2256 putative phosphohistidine phosphatase, SixA YP_616462.1 1470017 D 317655 CDS YP_616463.1 103486902 4081733 complement(1470688..1471080) 1 NC_008048.1 MerR family transcriptional regulator 1471080 4081733 Sala_1416 Sphingopyxis alaskensis RB2256 MerR family transcriptional regulator YP_616463.1 1470688 R 317655 CDS YP_616464.1 103486903 4081734 complement(1471095..1471388) 1 NC_008048.1 integration host factor subunit alpha 1471388 4081734 Sala_1417 Sphingopyxis alaskensis RB2256 integration host factor subunit alpha YP_616464.1 1471095 R 317655 CDS YP_616465.1 103486904 4081735 complement(1471564..1472529) 1 NC_008048.1 3-oxoacyl-(acyl-carrier-protein) synthase III 1472529 4081735 Sala_1418 Sphingopyxis alaskensis RB2256 3-oxoacyl-(acyl-carrier-protein) synthase III YP_616465.1 1471564 R 317655 CDS YP_616466.1 103486905 4081736 complement(1472526..1473560) 1 NC_008048.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; putative glycerol-3-phosphate acyltransferase PlsX 1473560 4081736 Sala_1419 Sphingopyxis alaskensis RB2256 putative glycerol-3-phosphate acyltransferase PlsX YP_616466.1 1472526 R 317655 CDS YP_616467.1 103486906 4081737 complement(1473583..1473762) 1 NC_008048.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 1473762 rpmF 4081737 rpmF Sphingopyxis alaskensis RB2256 50S ribosomal protein L32 YP_616467.1 1473583 R 317655 CDS YP_616468.1 103486907 4081738 1474080..1474517 1 NC_008048.1 eicosanoid and glutathione metabolism membrane-associated protein 1474517 4081738 Sala_1421 Sphingopyxis alaskensis RB2256 eicosanoid and glutathione metabolism membrane-associated protein YP_616468.1 1474080 D 317655 CDS YP_616469.1 103486908 4081739 complement(1474537..1475202) 1 NC_008048.1 beta-lactamase-like protein 1475202 4081739 Sala_1422 Sphingopyxis alaskensis RB2256 beta-lactamase-like protein YP_616469.1 1474537 R 317655 CDS YP_616470.1 103486909 4081740 1475304..1475609 1 NC_008048.1 hypothetical protein 1475609 4081740 Sala_1423 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616470.1 1475304 D 317655 CDS YP_616471.1 103486910 4081741 complement(1475622..1476176) 1 NC_008048.1 aspartyl protease-like protein 1476176 4081741 Sala_1424 Sphingopyxis alaskensis RB2256 aspartyl protease-like protein YP_616471.1 1475622 R 317655 CDS YP_616472.1 103486911 4081742 complement(1476218..1476868) 1 NC_008048.1 hypothetical protein 1476868 4081742 Sala_1425 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616472.1 1476218 R 317655 CDS YP_616473.1 103486912 4081743 complement(1476865..1477590) 1 NC_008048.1 glycine cleavage T protein (aminomethyl transferase) 1477590 4081743 Sala_1426 Sphingopyxis alaskensis RB2256 glycine cleavage T protein (aminomethyl transferase) YP_616473.1 1476865 R 317655 CDS YP_616474.1 103486913 4081744 1477649..1478671 1 NC_008048.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 1478671 4081744 Sala_1427 Sphingopyxis alaskensis RB2256 dihydroorotase YP_616474.1 1477649 D 317655 CDS YP_616475.1 103486914 4081745 complement(1478702..1479616) 1 NC_008048.1 rarD protein 1479616 4081745 Sala_1428 Sphingopyxis alaskensis RB2256 rarD protein YP_616475.1 1478702 R 317655 CDS YP_616476.1 103486915 4081746 complement(1479903..1480130) 1 NC_008048.1 hypothetical protein 1480130 4081746 Sala_1429 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616476.1 1479903 R 317655 CDS YP_616477.1 103486916 4081747 1480307..1480705 1 NC_008048.1 17 kDa surface antigen 1480705 4081747 Sala_1430 Sphingopyxis alaskensis RB2256 17 kDa surface antigen YP_616477.1 1480307 D 317655 CDS YP_616478.1 103486917 4081748 1480868..1481419 1 NC_008048.1 acetyltransferase 1481419 4081748 Sala_1431 Sphingopyxis alaskensis RB2256 acetyltransferase YP_616478.1 1480868 D 317655 CDS YP_616479.1 103486918 4081749 1481416..1481856 1 NC_008048.1 hypothetical protein 1481856 4081749 Sala_1432 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616479.1 1481416 D 317655 CDS YP_616480.1 103486919 4081515 1481943..1482692 1 NC_008048.1 hypothetical protein 1482692 4081515 Sala_1433 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616480.1 1481943 D 317655 CDS YP_616481.1 103486920 4081516 complement(1482778..1482960) 1 NC_008048.1 CsbD-like protein 1482960 4081516 Sala_1434 Sphingopyxis alaskensis RB2256 CsbD-like protein YP_616481.1 1482778 R 317655 CDS YP_616482.1 103486921 4081517 1483112..1484839 1 NC_008048.1 hypothetical protein 1484839 4081517 Sala_1435 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616482.1 1483112 D 317655 CDS YP_616483.1 103486922 4081519 1485902..1486342 1 NC_008048.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 1486342 4081519 Sala_1437 Sphingopyxis alaskensis RB2256 3-dehydroquinate dehydratase YP_616483.1 1485902 D 317655 CDS YP_616484.1 103486923 4081520 1486410..1486889 1 NC_008048.1 acetyl-CoA carboxylase, biotin carboxyl carrier protein 1486889 4081520 Sala_1438 Sphingopyxis alaskensis RB2256 acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_616484.1 1486410 D 317655 CDS YP_616485.1 103486924 4081521 1486896..1488260 1 NC_008048.1 acetyl-CoA carboxylase, biotin carboxylase 1488260 4081521 Sala_1439 Sphingopyxis alaskensis RB2256 acetyl-CoA carboxylase, biotin carboxylase YP_616485.1 1486896 D 317655 CDS YP_616486.1 103486925 4081522 1488552..1489781 1 NC_008048.1 hypothetical protein 1489781 4081522 Sala_1440 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616486.1 1488552 D 317655 CDS YP_616487.1 103486926 4081523 complement(1489863..1490561) 1 NC_008048.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 1490561 rplA 4081523 rplA Sphingopyxis alaskensis RB2256 50S ribosomal protein L1 YP_616487.1 1489863 R 317655 CDS YP_616488.1 103486927 4081524 complement(1490564..1490995) 1 NC_008048.1 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 1490995 rplK 4081524 rplK Sphingopyxis alaskensis RB2256 50S ribosomal protein L11 YP_616488.1 1490564 R 317655 CDS YP_616489.1 103486928 4081525 complement(1491180..1492136) 1 NC_008048.1 palmitoyl-CoA hydrolase 1492136 4081525 Sala_1443 Sphingopyxis alaskensis RB2256 palmitoyl-CoA hydrolase YP_616489.1 1491180 R 317655 CDS YP_616490.1 103486929 4081526 complement(1492186..1492722) 1 NC_008048.1 NusG antitermination factor 1492722 4081526 Sala_1444 Sphingopyxis alaskensis RB2256 NusG antitermination factor YP_616490.1 1492186 R 317655 CDS YP_616491.1 103486930 4081527 complement(1492758..1493138) 1 NC_008048.1 protein translocation complex subunit SecE 1493138 4081527 Sala_1445 Sphingopyxis alaskensis RB2256 protein translocation complex subunit SecE YP_616491.1 1492758 R 317655 CDS YP_616492.1 103486931 4081528 complement(1493113..1494459) 1 NC_008048.1 Na+/melibiose symporter-like protein 1494459 4081528 Sala_1446 Sphingopyxis alaskensis RB2256 Na+/melibiose symporter-like protein YP_616492.1 1493113 R 317655 CDS YP_616493.1 103486932 4081529 complement(1494518..1495162) 1 NC_008048.1 TetR family transcriptional regulator 1495162 4081529 Sala_1447 Sphingopyxis alaskensis RB2256 TetR family transcriptional regulator YP_616493.1 1494518 R 317655 CDS YP_616494.1 103486933 4081530 1495276..1496406 1 NC_008048.1 secretion protein HlyD 1496406 4081530 Sala_1448 Sphingopyxis alaskensis RB2256 secretion protein HlyD YP_616494.1 1495276 D 317655 CDS YP_616495.1 103486934 4081531 1496413..1499577 1 NC_008048.1 hydrophobe/amphiphile efflux protein 1499577 4081531 Sala_1449 Sphingopyxis alaskensis RB2256 hydrophobe/amphiphile efflux protein YP_616495.1 1496413 D 317655 CDS YP_616496.1 103486935 4081532 1499570..1500985 1 NC_008048.1 RND efflux system, outer membrane lipoprotein, NodT 1500985 4081532 Sala_1450 Sphingopyxis alaskensis RB2256 RND efflux system, outer membrane lipoprotein, NodT YP_616496.1 1499570 D 317655 CDS YP_616497.1 103486936 4081533 1500982..1502088 1 NC_008048.1 DNA alkylation repair enzyme-like protein 1502088 4081533 Sala_1451 Sphingopyxis alaskensis RB2256 DNA alkylation repair enzyme-like protein YP_616497.1 1500982 D 317655 CDS YP_616498.1 103486937 4081534 complement(1502085..1502336) 1 NC_008048.1 hypothetical protein 1502336 4081534 Sala_1452 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616498.1 1502085 R 317655 CDS YP_616499.1 103486938 4081264 complement(1502354..1504453) 1 NC_008048.1 penicillin-binding protein 1A 1504453 4081264 Sala_1453 Sphingopyxis alaskensis RB2256 penicillin-binding protein 1A YP_616499.1 1502354 R 317655 CDS YP_616500.1 103486939 4081265 complement(1504478..1505446) 1 NC_008048.1 hypothetical protein 1505446 4081265 Sala_1454 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616500.1 1504478 R 317655 CDS YP_616501.1 103486940 4081266 complement(1505446..1508568) 1 NC_008048.1 TonB-dependent receptor, plug 1508568 4081266 Sala_1455 Sphingopyxis alaskensis RB2256 TonB-dependent receptor, plug YP_616501.1 1505446 R 317655 CDS YP_616502.1 103486941 4081267 complement(1508600..1509940) 1 NC_008048.1 sodium:dicarboxylate symporter 1509940 4081267 Sala_1456 Sphingopyxis alaskensis RB2256 sodium:dicarboxylate symporter YP_616502.1 1508600 R 317655 CDS YP_616503.1 103486942 4081268 1510112..1511968 1 NC_008048.1 sensor signal transduction histidine kinase 1511968 4081268 Sala_1457 Sphingopyxis alaskensis RB2256 sensor signal transduction histidine kinase YP_616503.1 1510112 D 317655 CDS YP_616504.1 103486943 4081269 1511965..1513302 1 NC_008048.1 two component, sigma54 specific, Fis family transcriptional regulator 1513302 4081269 Sala_1458 Sphingopyxis alaskensis RB2256 two component, sigma54 specific, Fis family transcriptional regulator YP_616504.1 1511965 D 317655 CDS YP_616505.1 103486944 4081270 complement(1513392..1514570) 1 NC_008048.1 peptidase M19 1514570 4081270 Sala_1459 Sphingopyxis alaskensis RB2256 peptidase M19 YP_616505.1 1513392 R 317655 CDS YP_616506.1 103486945 4081271 complement(1514567..1516138) 1 NC_008048.1 beta-lactamase 1516138 4081271 Sala_1460 Sphingopyxis alaskensis RB2256 beta-lactamase YP_616506.1 1514567 R 317655 CDS YP_616507.1 103486946 4081272 complement(1516135..1517271) 1 NC_008048.1 hypothetical protein 1517271 4081272 Sala_1461 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616507.1 1516135 R 317655 CDS YP_616508.1 103486947 4081273 complement(1517268..1518308) 1 NC_008048.1 hypothetical protein 1518308 4081273 Sala_1462 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616508.1 1517268 R 317655 CDS YP_616509.1 103486948 4081274 complement(1518329..1520797) 1 NC_008048.1 TonB-dependent receptor, plug 1520797 4081274 Sala_1463 Sphingopyxis alaskensis RB2256 TonB-dependent receptor, plug YP_616509.1 1518329 R 317655 CDS YP_616510.1 103486949 4081275 complement(1521021..1522028) 1 NC_008048.1 mandelate racemase/muconate lactonizing protein 1522028 4081275 Sala_1464 Sphingopyxis alaskensis RB2256 mandelate racemase/muconate lactonizing protein YP_616510.1 1521021 R 317655 CDS YP_616511.1 103486950 4081276 complement(1522028..1524001) 1 NC_008048.1 beta-lactamase 1524001 4081276 Sala_1465 Sphingopyxis alaskensis RB2256 beta-lactamase YP_616511.1 1522028 R 317655 CDS YP_616512.1 103486951 4081277 1524144..1524764 1 NC_008048.1 XRE family transcriptional regulator 1524764 4081277 Sala_1466 Sphingopyxis alaskensis RB2256 XRE family transcriptional regulator YP_616512.1 1524144 D 317655 CDS YP_616513.1 103486952 4081278 1524787..1526484 1 NC_008048.1 N-acyl-D-amino-acid deacylase 1526484 4081278 Sala_1467 Sphingopyxis alaskensis RB2256 N-acyl-D-amino-acid deacylase YP_616513.1 1524787 D 317655 CDS YP_616514.1 103486953 4081279 complement(1526939..1527823) 1 NC_008048.1 phosphoserine phosphatase SerB 1527823 4081279 Sala_1468 Sphingopyxis alaskensis RB2256 phosphoserine phosphatase SerB YP_616514.1 1526939 R 317655 CDS YP_616515.1 103486954 4081280 1527864..1528784 1 NC_008048.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 1528784 miaA 4081280 miaA Sphingopyxis alaskensis RB2256 tRNA delta(2)-isopentenylpyrophosphate transferase YP_616515.1 1527864 D 317655 CDS YP_616516.1 103486955 4081281 1528868..1530613 1 NC_008048.1 acetolactate synthase large subunit 1530613 4081281 Sala_1470 Sphingopyxis alaskensis RB2256 acetolactate synthase large subunit YP_616516.1 1528868 D 317655 CDS YP_616517.1 103486956 4081282 1530762..1531280 1 NC_008048.1 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit 1531280 ilvH 4081282 ilvH Sphingopyxis alaskensis RB2256 acetolactate synthase 3 regulatory subunit YP_616517.1 1530762 D 317655 CDS YP_616518.1 103486957 4081244 1531388..1532428 1 NC_008048.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 1532428 4081244 Sala_1472 Sphingopyxis alaskensis RB2256 ketol-acid reductoisomerase YP_616518.1 1531388 D 317655 CDS YP_616519.1 103486958 4081245 1532537..1533676 1 NC_008048.1 catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine; 8-amino-7-oxononanoate synthase 1533676 4081245 Sala_1473 Sphingopyxis alaskensis RB2256 8-amino-7-oxononanoate synthase YP_616519.1 1532537 D 317655 CDS YP_616520.1 103486959 4081246 1533673..1534281 1 NC_008048.1 DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase 1534281 bioD 4081246 bioD Sphingopyxis alaskensis RB2256 dithiobiotin synthetase YP_616520.1 1533673 D 317655 CDS YP_616521.1 103486960 4081247 1534336..1535592 1 NC_008048.1 catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 1535592 4081247 Sala_1475 Sphingopyxis alaskensis RB2256 adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_616521.1 1534336 D 317655 CDS YP_616522.1 103486961 4081248 1535730..1537070 1 NC_008048.1 PpiC-type peptidyl-prolyl cis-trans isomerase 1537070 4081248 Sala_1476 Sphingopyxis alaskensis RB2256 PpiC-type peptidyl-prolyl cis-trans isomerase YP_616522.1 1535730 D 317655 CDS YP_616523.1 103486962 4081249 1537070..1538089 1 NC_008048.1 catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase 1538089 pdxA 4081249 pdxA Sphingopyxis alaskensis RB2256 4-hydroxythreonine-4-phosphate dehydrogenase YP_616523.1 1537070 D 317655 CDS YP_616524.1 103486963 4081250 1538110..1538925 1 NC_008048.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 1538925 ksgA 4081250 ksgA Sphingopyxis alaskensis RB2256 dimethyladenosine transferase YP_616524.1 1538110 D 317655 CDS YP_616525.1 103486964 4081251 complement(1539234..1539485) 1 NC_008048.1 hypothetical protein 1539485 4081251 Sala_1479 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616525.1 1539234 R 317655 CDS YP_616526.1 103486965 4081252 1539616..1539888 1 NC_008048.1 cold-shock DNA-binding domain-containing protein 1539888 4081252 Sala_1480 Sphingopyxis alaskensis RB2256 cold-shock DNA-binding domain-containing protein YP_616526.1 1539616 D 317655 CDS YP_616527.1 103486966 4081253 1539909..1540148 1 NC_008048.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 1540148 infA 4081253 infA Sphingopyxis alaskensis RB2256 translation initiation factor IF-1 YP_616527.1 1539909 D 317655 CDS YP_616528.1 103486967 4081254 1540387..1540581 1 NC_008048.1 hypothetical protein 1540581 4081254 Sala_1482 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616528.1 1540387 D 317655 CDS YP_616529.1 103486968 4081255 complement(1540612..1541913) 1 NC_008048.1 RNA polymerase ECF-subfamily sigma factor 1541913 4081255 Sala_1483 Sphingopyxis alaskensis RB2256 RNA polymerase ECF-subfamily sigma factor YP_616529.1 1540612 R 317655 CDS YP_616530.1 103486969 4081256 complement(1541932..1542363) 1 NC_008048.1 hypothetical protein 1542363 4081256 Sala_1484 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616530.1 1541932 R 317655 CDS YP_616531.1 103486970 4081257 complement(1542641..1546924) 1 NC_008048.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 1546924 4081257 Sala_1485 Sphingopyxis alaskensis RB2256 DNA-directed RNA polymerase subunit beta' YP_616531.1 1542641 R 317655 CDS YP_616532.1 103486971 4081258 complement(1546979..1551157) 1 NC_008048.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 1551157 rpoB 4081258 rpoB Sphingopyxis alaskensis RB2256 DNA-directed RNA polymerase subunit beta YP_616532.1 1546979 R 317655 CDS YP_616533.1 103486972 4081259 1551452..1552255 1 NC_008048.1 enoyl-CoA hydratase/isomerase 1552255 4081259 Sala_1487 Sphingopyxis alaskensis RB2256 enoyl-CoA hydratase/isomerase YP_616533.1 1551452 D 317655 CDS YP_616534.1 103486973 4081260 complement(1552390..1552992) 1 NC_008048.1 hypothetical protein 1552992 4081260 Sala_1488 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616534.1 1552390 R 317655 CDS YP_616535.1 103486974 4081261 complement(1553061..1553696) 1 NC_008048.1 hypothetical protein 1553696 4081261 Sala_1489 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616535.1 1553061 R 317655 CDS YP_616536.1 103486975 4081262 complement(1553755..1554312) 1 NC_008048.1 hypothetical protein 1554312 4081262 Sala_1490 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616536.1 1553755 R 317655 CDS YP_616537.1 103486976 4081263 1554464..1554907 1 NC_008048.1 BadM/Rrf2 family transcriptional regulator 1554907 4081263 Sala_1491 Sphingopyxis alaskensis RB2256 BadM/Rrf2 family transcriptional regulator YP_616537.1 1554464 D 317655 CDS YP_616538.1 103486977 4081169 complement(1555158..1555484) 1 NC_008048.1 hypothetical protein 1555484 4081169 Sala_1492 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616538.1 1555158 R 317655 CDS YP_616539.1 103486978 4081170 1555610..1556950 1 NC_008048.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 1556950 4081170 Sala_1493 Sphingopyxis alaskensis RB2256 3-phosphoshikimate 1-carboxyvinyltransferase YP_616539.1 1555610 D 317655 CDS YP_616540.1 103486979 4081171 1556947..1557576 1 NC_008048.1 cytidylate kinase 1557576 4081171 Sala_1494 Sphingopyxis alaskensis RB2256 cytidylate kinase YP_616540.1 1556947 D 317655 CDS YP_616541.1 103486980 4081172 1557849..1559561 1 NC_008048.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 1559561 rpsA 4081172 rpsA Sphingopyxis alaskensis RB2256 30S ribosomal protein S1 YP_616541.1 1557849 D 317655 CDS YP_616542.1 103486981 4081173 1559770..1560048 1 NC_008048.1 histone-like DNA-binding protein 1560048 4081173 Sala_1496 Sphingopyxis alaskensis RB2256 histone-like DNA-binding protein YP_616542.1 1559770 D 317655 CDS YP_616543.1 103486982 4081174 complement(1560148..1560915) 1 NC_008048.1 hypothetical protein 1560915 4081174 Sala_1497 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616543.1 1560148 R 317655 CDS YP_616544.1 103486983 4081175 complement(1560912..1561859) 1 NC_008048.1 ABC transporter 1561859 4081175 Sala_1498 Sphingopyxis alaskensis RB2256 ABC transporter YP_616544.1 1560912 R 317655 CDS YP_616545.1 103486984 4081177 complement(1562062..1562994) 1 NC_008048.1 hypothetical protein 1562994 4081177 Sala_1499 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616545.1 1562062 R 317655 CDS YP_616546.1 103486985 4081178 1563081..1564586 1 NC_008048.1 extracellular solute-binding protein 1564586 4081178 Sala_1500 Sphingopyxis alaskensis RB2256 extracellular solute-binding protein YP_616546.1 1563081 D 317655 CDS YP_616547.1 103486986 4081179 1564893..1565315 1 NC_008048.1 hypothetical protein 1565315 4081179 Sala_1501 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616547.1 1564893 D 317655 CDS YP_616548.1 103486987 4081180 complement(1565391..1565924) 1 NC_008048.1 response regulator receiver protein 1565924 4081180 Sala_1502 Sphingopyxis alaskensis RB2256 response regulator receiver protein YP_616548.1 1565391 R 317655 CDS YP_616549.1 103486988 4081181 complement(1565921..1567228) 1 NC_008048.1 sensor signal transduction histidine kinase 1567228 4081181 Sala_1503 Sphingopyxis alaskensis RB2256 sensor signal transduction histidine kinase YP_616549.1 1565921 R 317655 CDS YP_616550.1 103486989 4081182 complement(1567228..1567929) 1 NC_008048.1 Surfeit locus 1 1567929 4081182 Sala_1504 Sphingopyxis alaskensis RB2256 Surfeit locus 1 YP_616550.1 1567228 R 317655 CDS YP_616551.1 103486990 4081183 complement(1567926..1568312) 1 NC_008048.1 cytochrome C oxidase subunit IV 1568312 4081183 Sala_1505 Sphingopyxis alaskensis RB2256 cytochrome C oxidase subunit IV YP_616551.1 1567926 R 317655 CDS YP_616552.1 103486991 4081184 complement(1568309..1568935) 1 NC_008048.1 cytochrome c oxidase subunit III 1568935 4081184 Sala_1506 Sphingopyxis alaskensis RB2256 cytochrome c oxidase subunit III YP_616552.1 1568309 R 317655 CDS YP_616553.1 103486992 4080020 complement(1568940..1570958) 1 NC_008048.1 cytochrome-c oxidase 1570958 4080020 Sala_1507 Sphingopyxis alaskensis RB2256 cytochrome-c oxidase YP_616553.1 1568940 R 317655 CDS YP_616554.1 103486993 4080021 complement(1570980..1572209) 1 NC_008048.1 ubiquinol oxidase subunit II 1572209 4080021 Sala_1508 Sphingopyxis alaskensis RB2256 ubiquinol oxidase subunit II YP_616554.1 1570980 R 317655 CDS YP_616555.1 103486994 4080022 1572460..1573788 1 NC_008048.1 general substrate transporter 1573788 4080022 Sala_1509 Sphingopyxis alaskensis RB2256 general substrate transporter YP_616555.1 1572460 D 317655 CDS YP_616556.1 103486995 4080023 1574024..1575583 1 NC_008048.1 major facilitator superfamily transporter 1575583 4080023 Sala_1510 Sphingopyxis alaskensis RB2256 major facilitator superfamily transporter YP_616556.1 1574024 D 317655 CDS YP_616557.1 103486996 4080024 complement(1575805..1578285) 1 NC_008048.1 Beta-glucosidase 1578285 4080024 Sala_1511 Sphingopyxis alaskensis RB2256 Beta-glucosidase YP_616557.1 1575805 R 317655 CDS YP_616558.1 103486997 4080025 complement(1578637..1580598) 1 NC_008048.1 K+ potassium transporter 1580598 4080025 Sala_1512 Sphingopyxis alaskensis RB2256 K+ potassium transporter YP_616558.1 1578637 R 317655 CDS YP_616559.1 103486998 4080026 complement(1580638..1581312) 1 NC_008048.1 cytochrome c biogenesis factor 1581312 4080026 Sala_1513 Sphingopyxis alaskensis RB2256 cytochrome c biogenesis factor YP_616559.1 1580638 R 317655 CDS YP_616560.1 103486999 4080027 complement(1581309..1581740) 1 NC_008048.1 cytochrome C biogenesis protein 1581740 4080027 Sala_1514 Sphingopyxis alaskensis RB2256 cytochrome C biogenesis protein YP_616560.1 1581309 R 317655 CDS YP_616561.1 103487000 4080028 complement(1581737..1582267) 1 NC_008048.1 thioredoxin-like protein 1582267 4080028 Sala_1515 Sphingopyxis alaskensis RB2256 thioredoxin-like protein YP_616561.1 1581737 R 317655 CDS YP_616562.1 103487001 4080029 complement(1582264..1584234) 1 NC_008048.1 cytochrome c assembly protein 1584234 4080029 Sala_1516 Sphingopyxis alaskensis RB2256 cytochrome c assembly protein YP_616562.1 1582264 R 317655 CDS YP_616563.1 103487002 4080030 complement(1584368..1584805) 1 NC_008048.1 CcmE/CycJ protein 1584805 4080030 Sala_1517 Sphingopyxis alaskensis RB2256 CcmE/CycJ protein YP_616563.1 1584368 R 317655 CDS YP_616564.1 103487003 4080031 complement(1584802..1584957) 1 NC_008048.1 hypothetical protein 1584957 4080031 Sala_1518 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616564.1 1584802 R 317655 CDS YP_616565.1 103487004 4080032 complement(1584962..1585693) 1 NC_008048.1 heme exporter protein CcmC 1585693 4080032 Sala_1519 Sphingopyxis alaskensis RB2256 heme exporter protein CcmC YP_616565.1 1584962 R 317655 CDS YP_616566.1 103487005 4080033 complement(1585763..1586194) 1 NC_008048.1 hypothetical protein 1586194 4080033 Sala_1520 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616566.1 1585763 R 317655 CDS YP_616567.1 103487006 4080034 complement(1586256..1587305) 1 NC_008048.1 Glu/Leu/Phe/Val dehydrogenase 1587305 4080034 Sala_1521 Sphingopyxis alaskensis RB2256 Glu/Leu/Phe/Val dehydrogenase YP_616567.1 1586256 R 317655 CDS YP_616568.1 103487007 4080036 1587606..1588262 1 NC_008048.1 2OG-Fe(II) oxygenase 1588262 4080036 Sala_1522 Sphingopyxis alaskensis RB2256 2OG-Fe(II) oxygenase YP_616568.1 1587606 D 317655 CDS YP_616569.1 103487008 4080037 complement(1588393..1589172) 1 NC_008048.1 hypothetical protein 1589172 4080037 Sala_1523 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616569.1 1588393 R 317655 CDS YP_616570.1 103487009 4080038 1589271..1591052 1 NC_008048.1 ABC transporter 1591052 4080038 Sala_1524 Sphingopyxis alaskensis RB2256 ABC transporter YP_616570.1 1589271 D 317655 CDS YP_616571.1 103487010 4082424 complement(1591160..1591906) 1 NC_008048.1 inositol monophosphatase 1591906 4082424 Sala_1525 Sphingopyxis alaskensis RB2256 inositol monophosphatase YP_616571.1 1591160 R 317655 CDS YP_616572.1 103487011 4082425 complement(1591903..1593804) 1 NC_008048.1 in Rhizobium meliloti this protein is involved in the synthesis of nodulation factors that are active on the roots of alfalfa; catalyzes formation of activated sulfate intermediate; converts ATP and sulfate to diphosphate and adenylylsulfate and then ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; the activated intermediate is transferred to the nodulation factors by NodH; may interact with NodP and NodQ; similar to the CysD and CysN proteins from EScherichia coli involved in cysteine biosynthesis; bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase 1593804 4082425 Sala_1526 Sphingopyxis alaskensis RB2256 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase YP_616572.1 1591903 R 317655 CDS YP_616573.1 103487012 4082426 complement(1593804..1594709) 1 NC_008048.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 1594709 4082426 Sala_1527 Sphingopyxis alaskensis RB2256 sulfate adenylyltransferase subunit 2 YP_616573.1 1593804 R 317655 CDS YP_616574.1 103487013 4082427 complement(1594792..1595694) 1 NC_008048.1 LysR family transcriptional regulator 1595694 4082427 Sala_1528 Sphingopyxis alaskensis RB2256 LysR family transcriptional regulator YP_616574.1 1594792 R 317655 CDS YP_616575.1 103487014 4082428 1595795..1596964 1 NC_008048.1 acyl-CoA dehydrogenase-like protein 1596964 4082428 Sala_1529 Sphingopyxis alaskensis RB2256 acyl-CoA dehydrogenase-like protein YP_616575.1 1595795 D 317655 CDS YP_616576.1 103487015 4082429 1596961..1597308 1 NC_008048.1 hypothetical protein 1597308 4082429 Sala_1530 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616576.1 1596961 D 317655 CDS YP_616577.1 103487016 4082430 1597305..1597583 1 NC_008048.1 hypothetical protein 1597583 4082430 Sala_1531 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616577.1 1597305 D 317655 CDS YP_616578.1 103487017 4082431 1597617..1599215 1 NC_008048.1 propionyl-CoA carboxylase 1599215 4082431 Sala_1532 Sphingopyxis alaskensis RB2256 propionyl-CoA carboxylase YP_616578.1 1597617 D 317655 CDS YP_616579.1 103487018 4082432 1599221..1601059 1 NC_008048.1 carbamoyl-phosphate synthase subunit L 1601059 4082432 Sala_1533 Sphingopyxis alaskensis RB2256 carbamoyl-phosphate synthase subunit L YP_616579.1 1599221 D 317655 CDS YP_616580.1 103487019 4082433 1601227..1601679 1 NC_008048.1 MaoC-like dehydratase 1601679 4082433 Sala_1534 Sphingopyxis alaskensis RB2256 MaoC-like dehydratase YP_616580.1 1601227 D 317655 CDS YP_616581.1 103487020 4082434 1601679..1602530 1 NC_008048.1 citryl-CoA lyase 1602530 4082434 Sala_1535 Sphingopyxis alaskensis RB2256 citryl-CoA lyase YP_616581.1 1601679 D 317655 CDS YP_616582.1 103487021 4082435 complement(1602624..1604162) 1 NC_008048.1 phospholipase D/transphosphatidylase 1604162 4082435 Sala_1536 Sphingopyxis alaskensis RB2256 phospholipase D/transphosphatidylase YP_616582.1 1602624 R 317655 CDS YP_616583.1 103487022 4082436 complement(1604167..1605969) 1 NC_008048.1 acyl-CoA dehydrogenase-like protein 1605969 4082436 Sala_1537 Sphingopyxis alaskensis RB2256 acyl-CoA dehydrogenase-like protein YP_616583.1 1604167 R 317655 CDS YP_616584.1 103487023 4082437 complement(1606042..1606503) 1 NC_008048.1 MerR family transcriptional regulator 1606503 4082437 Sala_1538 Sphingopyxis alaskensis RB2256 MerR family transcriptional regulator YP_616584.1 1606042 R 317655 CDS YP_616585.1 103487024 4082438 complement(1606534..1607067) 1 NC_008048.1 hypothetical protein 1607067 4082438 Sala_1539 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616585.1 1606534 R 317655 CDS YP_616586.1 103487025 4082439 complement(1607054..1607434) 1 NC_008048.1 phosphoribosyl-AMP cyclohydrolase 1607434 4082439 Sala_1540 Sphingopyxis alaskensis RB2256 phosphoribosyl-AMP cyclohydrolase YP_616586.1 1607054 R 317655 CDS YP_616587.1 103487026 4082440 1607527..1609035 1 NC_008048.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 1609035 4082440 Sala_1541 Sphingopyxis alaskensis RB2256 amidophosphoribosyltransferase YP_616587.1 1607527 D 317655 CDS YP_616588.1 103487027 4082441 1609040..1609774 1 NC_008048.1 short-chain dehydrogenase/reductase SDR 1609774 4082441 Sala_1542 Sphingopyxis alaskensis RB2256 short-chain dehydrogenase/reductase SDR YP_616588.1 1609040 D 317655 CDS YP_616589.1 103487028 4082442 1609834..1610220 1 NC_008048.1 hypothetical protein 1610220 4082442 Sala_1543 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616589.1 1609834 D 317655 CDS YP_616590.1 103487029 4082713 complement(1610318..1611487) 1 NC_008048.1 beta-lactamase 1611487 4082713 Sala_1544 Sphingopyxis alaskensis RB2256 beta-lactamase YP_616590.1 1610318 R 317655 CDS YP_616591.1 103487030 4082714 complement(1611507..1612787) 1 NC_008048.1 cyclopropane-fatty-acyl-phospholipid synthase 1612787 4082714 Sala_1545 Sphingopyxis alaskensis RB2256 cyclopropane-fatty-acyl-phospholipid synthase YP_616591.1 1611507 R 317655 CDS YP_616592.1 103487031 4082715 complement(1612866..1613825) 1 NC_008048.1 membrane-bound metal-dependent hydrolase 1613825 4082715 Sala_1546 Sphingopyxis alaskensis RB2256 membrane-bound metal-dependent hydrolase YP_616592.1 1612866 R 317655 CDS YP_616593.1 103487032 4082716 complement(1613838..1614866) 1 NC_008048.1 catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin; 2-oxoglutarate ferredoxin oxidoreductase subunit beta 1614866 4082716 Sala_1547 Sphingopyxis alaskensis RB2256 2-oxoglutarate ferredoxin oxidoreductase subunit beta YP_616593.1 1613838 R 317655 CDS YP_616594.1 103487033 4082717 complement(1614872..1616737) 1 NC_008048.1 pyruvate flavodoxin/ferredoxin oxidoreductase-like protein 1616737 4082717 Sala_1548 Sphingopyxis alaskensis RB2256 pyruvate flavodoxin/ferredoxin oxidoreductase-like protein YP_616594.1 1614872 R 317655 CDS YP_616595.1 103487034 4082718 1616922..1617869 1 NC_008048.1 Alpha/beta hydrolase fold-3 1617869 4082718 Sala_1549 Sphingopyxis alaskensis RB2256 Alpha/beta hydrolase fold-3 YP_616595.1 1616922 D 317655 CDS YP_616596.1 103487035 4082719 1617866..1618342 1 NC_008048.1 NUDIX hydrolase 1618342 4082719 Sala_1550 Sphingopyxis alaskensis RB2256 NUDIX hydrolase YP_616596.1 1617866 D 317655 CDS YP_616597.1 103487036 4082720 complement(1618454..1619116) 1 NC_008048.1 uracil-DNA glycosylase superfamily protein 1619116 4082720 Sala_1551 Sphingopyxis alaskensis RB2256 uracil-DNA glycosylase superfamily protein YP_616597.1 1618454 R 317655 CDS YP_616598.1 103487037 4082721 1619140..1619661 1 NC_008048.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 1619661 4082721 Sala_1552 Sphingopyxis alaskensis RB2256 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_616598.1 1619140 D 317655 CDS YP_616599.1 103487038 4082723 1619856..1620863 1 NC_008048.1 NAD-dependent epimerase/dehydratase 1620863 4082723 Sala_1553 Sphingopyxis alaskensis RB2256 NAD-dependent epimerase/dehydratase YP_616599.1 1619856 D 317655 CDS YP_616600.1 103487039 4082724 complement(1620881..1621138) 1 NC_008048.1 hypothetical protein 1621138 4082724 Sala_1554 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616600.1 1620881 R 317655 CDS YP_616601.1 103487040 4082725 complement(1621163..1621429) 1 NC_008048.1 ECF subfamily RNA polymerase sigma-24 factor 1621429 4082725 Sala_1555 Sphingopyxis alaskensis RB2256 ECF subfamily RNA polymerase sigma-24 factor YP_616601.1 1621163 R 317655 CDS YP_616602.1 103487041 4082726 complement(1621504..1622208) 1 NC_008048.1 hypothetical protein 1622208 4082726 Sala_1556 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616602.1 1621504 R 317655 CDS YP_616603.1 103487042 4082727 complement(1622201..1623061) 1 NC_008048.1 hypothetical protein 1623061 4082727 Sala_1557 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616603.1 1622201 R 317655 CDS YP_616604.1 103487043 4082728 complement(1623066..1623371) 1 NC_008048.1 hypothetical protein 1623371 4082728 Sala_1558 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616604.1 1623066 R 317655 CDS YP_616605.1 103487044 4082729 1623680..1624696 1 NC_008048.1 UDP-glucose 4-epimerase 1624696 4082729 Sala_1559 Sphingopyxis alaskensis RB2256 UDP-glucose 4-epimerase YP_616605.1 1623680 D 317655 CDS YP_616606.1 103487045 4082730 complement(1624715..1625287) 1 NC_008048.1 hypothetical protein 1625287 4082730 Sala_1560 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616606.1 1624715 R 317655 CDS YP_616607.1 103487046 4082675 complement(1625678..1629898) 1 NC_008048.1 hypothetical protein 1629898 4082675 Sala_1561 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616607.1 1625678 R 317655 CDS YP_616608.1 103487047 4082676 complement(1629898..1632237) 1 NC_008048.1 surface antigen (D15) 1632237 4082676 Sala_1562 Sphingopyxis alaskensis RB2256 surface antigen (D15) YP_616608.1 1629898 R 317655 CDS YP_616609.1 103487048 4082677 complement(1632372..1633565) 1 NC_008048.1 UDP-glucose 6-dehydrogenase 1633565 4082677 Sala_1563 Sphingopyxis alaskensis RB2256 UDP-glucose 6-dehydrogenase YP_616609.1 1632372 R 317655 CDS YP_616610.1 103487049 4082678 complement(1633628..1635091) 1 NC_008048.1 hypothetical protein 1635091 4082678 Sala_1564 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616610.1 1633628 R 317655 CDS YP_616611.1 103487050 4082679 complement(1635235..1636851) 1 NC_008048.1 hypothetical protein 1636851 4082679 Sala_1565 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616611.1 1635235 R 317655 CDS YP_616612.1 103487051 4082680 complement(1636960..1637919) 1 NC_008048.1 NAD-dependent epimerase/dehydratase 1637919 4082680 Sala_1566 Sphingopyxis alaskensis RB2256 NAD-dependent epimerase/dehydratase YP_616612.1 1636960 R 317655 CDS YP_616613.1 103487052 4082681 1638125..1639534 1 NC_008048.1 hypothetical protein 1639534 4082681 Sala_1567 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616613.1 1638125 D 317655 CDS YP_616614.1 103487053 4082682 1639528..1640922 1 NC_008048.1 hypothetical protein 1640922 4082682 Sala_1568 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616614.1 1639528 D 317655 CDS YP_616615.1 103487054 4082683 1640935..1642302 1 NC_008048.1 hypothetical protein 1642302 4082683 Sala_1569 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616615.1 1640935 D 317655 CDS YP_616616.1 103487055 4082684 1642347..1643105 1 NC_008048.1 glycosyl transferase family protein 1643105 4082684 Sala_1570 Sphingopyxis alaskensis RB2256 glycosyl transferase family protein YP_616616.1 1642347 D 317655 CDS YP_616617.1 103487056 4082685 complement(1643120..1644007) 1 NC_008048.1 hypothetical protein 1644007 4082685 Sala_1571 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616617.1 1643120 R 317655 CDS YP_616618.1 103487057 4082686 complement(1644054..1645562) 1 NC_008048.1 polysaccharide biosynthesis protein 1645562 4082686 Sala_1572 Sphingopyxis alaskensis RB2256 polysaccharide biosynthesis protein YP_616618.1 1644054 R 317655 CDS YP_616619.1 103487058 4082687 complement(1645575..1647077) 1 NC_008048.1 DegT/DnrJ/EryC1/StrS aminotransferase 1647077 4082687 Sala_1573 Sphingopyxis alaskensis RB2256 DegT/DnrJ/EryC1/StrS aminotransferase YP_616619.1 1645575 R 317655 CDS YP_616620.1 103487059 4082688 complement(1647074..1647727) 1 NC_008048.1 putative serine O-acetyltransferase 1647727 4082688 Sala_1574 Sphingopyxis alaskensis RB2256 putative serine O-acetyltransferase YP_616620.1 1647074 R 317655 CDS YP_616621.1 103487060 4082689 complement(1647738..1648880) 1 NC_008048.1 UDP-N-acetylglucosamine 2-epimerase 1648880 4082689 Sala_1575 Sphingopyxis alaskensis RB2256 UDP-N-acetylglucosamine 2-epimerase YP_616621.1 1647738 R 317655 CDS YP_616622.1 103487061 4082690 complement(1648877..1649929) 1 NC_008048.1 N-acylneuraminate-9-phosphate synthase 1649929 4082690 Sala_1576 Sphingopyxis alaskensis RB2256 N-acylneuraminate-9-phosphate synthase YP_616622.1 1648877 R 317655 CDS YP_616623.1 103487062 4082691 complement(1649923..1650720) 1 NC_008048.1 short-chain dehydrogenase/reductase SDR 1650720 4082691 Sala_1577 Sphingopyxis alaskensis RB2256 short-chain dehydrogenase/reductase SDR YP_616623.1 1649923 R 317655 CDS YP_616624.1 103487063 4082692 complement(1650717..1651409) 1 NC_008048.1 acylneuraminate cytidylyltransferase 1651409 4082692 Sala_1578 Sphingopyxis alaskensis RB2256 acylneuraminate cytidylyltransferase YP_616624.1 1650717 R 317655 CDS YP_616625.1 103487064 4083016 complement(1651406..1652407) 1 NC_008048.1 oxidoreductase-like protein 1652407 4083016 Sala_1579 Sphingopyxis alaskensis RB2256 oxidoreductase-like protein YP_616625.1 1651406 R 317655 CDS YP_616626.1 103487065 4083017 complement(1652398..1654647) 1 NC_008048.1 N-acylneuraminate-9-phosphate synthase 1654647 4083017 Sala_1580 Sphingopyxis alaskensis RB2256 N-acylneuraminate-9-phosphate synthase YP_616626.1 1652398 R 317655 CDS YP_616627.1 103487066 4083018 complement(1654644..1655327) 1 NC_008048.1 acylneuraminate cytidylyltransferase 1655327 4083018 Sala_1581 Sphingopyxis alaskensis RB2256 acylneuraminate cytidylyltransferase YP_616627.1 1654644 R 317655 CDS YP_616628.1 103487067 4083019 complement(1655327..1656631) 1 NC_008048.1 hypothetical protein 1656631 4083019 Sala_1582 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616628.1 1655327 R 317655 CDS YP_616629.1 103487068 4083020 complement(1656624..1658837) 1 NC_008048.1 protein-tyrosine kinase 1658837 4083020 Sala_1583 Sphingopyxis alaskensis RB2256 protein-tyrosine kinase YP_616629.1 1656624 R 317655 CDS YP_616630.1 103487069 4083021 complement(1659023..1660414) 1 NC_008048.1 O-antigen polymerase 1660414 4083021 Sala_1584 Sphingopyxis alaskensis RB2256 O-antigen polymerase YP_616630.1 1659023 R 317655 CDS YP_616631.1 103487070 4083022 complement(1660411..1662372) 1 NC_008048.1 polysaccharide biosynthesis protein CapD 1662372 4083022 Sala_1585 Sphingopyxis alaskensis RB2256 polysaccharide biosynthesis protein CapD YP_616631.1 1660411 R 317655 CDS YP_616632.1 103487071 4083023 complement(1662430..1662993) 1 NC_008048.1 sugar transferase 1662993 4083023 Sala_1586 Sphingopyxis alaskensis RB2256 sugar transferase YP_616632.1 1662430 R 317655 CDS YP_616633.1 103487072 4083024 complement(1662990..1663922) 1 NC_008048.1 NAD-dependent epimerase/dehydratase 1663922 4083024 Sala_1587 Sphingopyxis alaskensis RB2256 NAD-dependent epimerase/dehydratase YP_616633.1 1662990 R 317655 CDS YP_616634.1 103487073 4083025 complement(1663976..1664749) 1 NC_008048.1 polysaccharide export protein 1664749 4083025 Sala_1588 Sphingopyxis alaskensis RB2256 polysaccharide export protein YP_616634.1 1663976 R 317655 CDS YP_616635.1 103487074 4083026 complement(1664934..1665701) 1 NC_008048.1 metallophosphoesterase 1665701 4083026 Sala_1589 Sphingopyxis alaskensis RB2256 metallophosphoesterase YP_616635.1 1664934 R 317655 CDS YP_616636.1 103487075 4083027 1665926..1667050 1 NC_008048.1 UDP-N-acetylglucosamine 2-epimerase 1667050 4083027 Sala_1590 Sphingopyxis alaskensis RB2256 UDP-N-acetylglucosamine 2-epimerase YP_616636.1 1665926 D 317655 CDS YP_616637.1 103487076 4083028 1667037..1668332 1 NC_008048.1 UDP-glucose/GDP-mannose dehydrogenase 1668332 4083028 Sala_1591 Sphingopyxis alaskensis RB2256 UDP-glucose/GDP-mannose dehydrogenase YP_616637.1 1667037 D 317655 CDS YP_616638.1 103487077 4083029 1668378..1669184 1 NC_008048.1 phosphomannose isomerase-like protein 1669184 4083029 Sala_1592 Sphingopyxis alaskensis RB2256 phosphomannose isomerase-like protein YP_616638.1 1668378 D 317655 CDS YP_616639.1 103487078 4083030 1669207..1670280 1 NC_008048.1 mannose-1-phosphate guanylyltransferase (GDP) 1670280 4083030 Sala_1593 Sphingopyxis alaskensis RB2256 mannose-1-phosphate guanylyltransferase (GDP) YP_616639.1 1669207 D 317655 CDS YP_616640.1 103487079 4083031 1670334..1670900 1 NC_008048.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 1670900 4083031 Sala_1594 Sphingopyxis alaskensis RB2256 ATP-dependent protease peptidase subunit YP_616640.1 1670334 D 317655 CDS YP_616641.1 103487080 4083032 1670905..1672206 1 NC_008048.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 1672206 hslU 4083032 hslU Sphingopyxis alaskensis RB2256 ATP-dependent protease ATP-binding subunit HslU YP_616641.1 1670905 D 317655 CDS YP_616642.1 103487081 4083033 1672711..1673568 1 NC_008048.1 XRE family transcriptional regulator 1673568 4083033 Sala_1596 Sphingopyxis alaskensis RB2256 XRE family transcriptional regulator YP_616642.1 1672711 D 317655 CDS YP_616643.1 103487082 4083034 1673683..1674624 1 NC_008048.1 hypothetical protein 1674624 4083034 Sala_1597 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616643.1 1673683 D 317655 CDS YP_616644.1 103487083 4083035 1674728..1675582 1 NC_008048.1 tRNA(Ile)-lysidine synthetase-like protein 1675582 4083035 Sala_1598 Sphingopyxis alaskensis RB2256 tRNA(Ile)-lysidine synthetase-like protein YP_616644.1 1674728 D 317655 CDS YP_616645.1 103487084 4082751 1675663..1677606 1 NC_008048.1 ATP-dependent metalloprotease FtsH 1677606 4082751 Sala_1599 Sphingopyxis alaskensis RB2256 ATP-dependent metalloprotease FtsH YP_616645.1 1675663 D 317655 CDS YP_616646.1 103487085 4082752 1677659..1678054 1 NC_008048.1 hypothetical protein 1678054 4082752 Sala_1600 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616646.1 1677659 D 317655 CDS YP_616647.1 103487086 4082753 1678467..1679204 1 NC_008048.1 hypothetical protein 1679204 4082753 Sala_1601 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616647.1 1678467 D 317655 CDS YP_616648.1 103487087 4082754 complement(1679430..1679774) 1 NC_008048.1 Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 1679774 4082754 Sala_1602 Sphingopyxis alaskensis RB2256 DNA-directed RNA polymerase subunit omega YP_616648.1 1679430 R 317655 CDS YP_616649.1 103487088 4082755 1679910..1681100 1 NC_008048.1 phospholipase D/transphosphatidylase 1681100 4082755 Sala_1603 Sphingopyxis alaskensis RB2256 phospholipase D/transphosphatidylase YP_616649.1 1679910 D 317655 CDS YP_616650.1 103487089 4082756 complement(1681104..1681742) 1 NC_008048.1 type 12 methyltransferase 1681742 4082756 Sala_1604 Sphingopyxis alaskensis RB2256 type 12 methyltransferase YP_616650.1 1681104 R 317655 CDS YP_616651.1 103487090 4082757 1681887..1683209 1 NC_008048.1 major facilitator superfamily transporter 1683209 4082757 Sala_1605 Sphingopyxis alaskensis RB2256 major facilitator superfamily transporter YP_616651.1 1681887 D 317655 CDS YP_616652.1 103487091 4082758 complement(1683270..1685591) 1 NC_008048.1 ATPase AAA 1685591 4082758 Sala_1606 Sphingopyxis alaskensis RB2256 ATPase AAA YP_616652.1 1683270 R 317655 CDS YP_616653.1 103487092 4082759 1685734..1686612 1 NC_008048.1 LysR family transcriptional regulator 1686612 4082759 Sala_1607 Sphingopyxis alaskensis RB2256 LysR family transcriptional regulator YP_616653.1 1685734 D 317655 CDS YP_616654.1 103487093 4082761 complement(1686942..1687184) 1 NC_008048.1 hypothetical protein 1687184 4082761 Sala_1608 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616654.1 1686942 R 317655 CDS YP_616655.1 103487094 4082762 complement(1687263..1688273) 1 NC_008048.1 putative secreted peptidyl prolyl cis-trans isomerase, cyclophilin type 1688273 4082762 Sala_1609 Sphingopyxis alaskensis RB2256 putative secreted peptidyl prolyl cis-trans isomerase, cyclophilin type YP_616655.1 1687263 R 317655 CDS YP_616656.1 103487095 4082765 complement(1688690..1691347) 1 NC_008048.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate phosphate dikinase 1691347 4082765 Sala_1610 Sphingopyxis alaskensis RB2256 pyruvate phosphate dikinase YP_616656.1 1688690 R 317655 CDS YP_616657.1 103487096 4082766 complement(1691545..1693716) 1 NC_008048.1 glycine--tRNA ligase 1693716 4082766 Sala_1611 Sphingopyxis alaskensis RB2256 glycine--tRNA ligase YP_616657.1 1691545 R 317655 CDS YP_616658.1 103487097 4081885 complement(1693853..1694842) 1 NC_008048.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 1694842 glyQ 4081885 glyQ Sphingopyxis alaskensis RB2256 glycyl-tRNA synthetase subunit alpha YP_616658.1 1693853 R 317655 CDS YP_616659.1 103487098 4081886 1694978..1695193 1 NC_008048.1 XRE family transcriptional regulator 1695193 4081886 Sala_1613 Sphingopyxis alaskensis RB2256 XRE family transcriptional regulator YP_616659.1 1694978 D 317655 CDS YP_616660.1 103487099 4081887 1695219..1695794 1 NC_008048.1 hypothetical protein 1695794 4081887 Sala_1614 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616660.1 1695219 D 317655 CDS YP_616661.1 103487100 4081888 1695860..1696831 1 NC_008048.1 GumN protein 1696831 4081888 Sala_1615 Sphingopyxis alaskensis RB2256 GumN protein YP_616661.1 1695860 D 317655 CDS YP_616662.1 103487101 4081889 1696828..1697727 1 NC_008048.1 GumN protein 1697727 4081889 Sala_1616 Sphingopyxis alaskensis RB2256 GumN protein YP_616662.1 1696828 D 317655 CDS YP_616663.1 103487102 4081890 1697878..1698516 1 NC_008048.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc 1698516 4081890 Sala_1617 Sphingopyxis alaskensis RB2256 50S ribosomal protein L25/general stress protein Ctc YP_616663.1 1697878 D 317655 CDS YP_616664.1 103487103 4081891 1698583..1699152 1 NC_008048.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 1699152 4081891 Sala_1618 Sphingopyxis alaskensis RB2256 peptidyl-tRNA hydrolase YP_616664.1 1698583 D 317655 CDS YP_616665.1 103487104 4081892 1699270..1700259 1 NC_008048.1 short-chain dehydrogenase/reductase SDR 1700259 4081892 Sala_1619 Sphingopyxis alaskensis RB2256 short-chain dehydrogenase/reductase SDR YP_616665.1 1699270 D 317655 CDS YP_616666.1 103487105 4081893 complement(1700273..1700926) 1 NC_008048.1 Allergen V5/Tpx-1 related 1700926 4081893 Sala_1620 Sphingopyxis alaskensis RB2256 Allergen V5/Tpx-1 related YP_616666.1 1700273 R 317655 CDS YP_616667.1 103487106 4081894 1701043..1702140 1 NC_008048.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 1702140 4081894 Sala_1621 Sphingopyxis alaskensis RB2256 GTP-dependent nucleic acid-binding protein EngD YP_616667.1 1701043 D 317655 CDS YP_616668.1 103487107 4081895 1702201..1702488 1 NC_008048.1 excinuclease ABC subunit C 1702488 4081895 Sala_1622 Sphingopyxis alaskensis RB2256 excinuclease ABC subunit C YP_616668.1 1702201 D 317655 CDS YP_616669.1 103487108 4081896 complement(1702552..1702953) 1 NC_008048.1 MerR family transcriptional regulator 1702953 4081896 Sala_1623 Sphingopyxis alaskensis RB2256 MerR family transcriptional regulator YP_616669.1 1702552 R 317655 CDS YP_616670.1 103487109 4081897 1702995..1703732 1 NC_008048.1 hypothetical protein 1703732 4081897 Sala_1624 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616670.1 1702995 D 317655 CDS YP_616671.1 103487110 4081898 1703813..1705378 1 NC_008048.1 twin-arginine translocation pathway signal 1705378 4081898 Sala_1625 Sphingopyxis alaskensis RB2256 twin-arginine translocation pathway signal YP_616671.1 1703813 D 317655 CDS YP_616672.1 103487111 4081899 complement(1705394..1707205) 1 NC_008048.1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein 1707205 mutL 4081899 mutL Sphingopyxis alaskensis RB2256 DNA mismatch repair protein YP_616672.1 1705394 R 317655 CDS YP_616673.1 103487112 4081900 1707402..1708448 1 NC_008048.1 functions in MreBCD complex in some organisms; rod shape-determining protein MreB 1708448 4081900 Sala_1627 Sphingopyxis alaskensis RB2256 rod shape-determining protein MreB YP_616673.1 1707402 D 317655 CDS YP_616674.1 103487113 4081901 1708466..1709368 1 NC_008048.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 1709368 4081901 Sala_1628 Sphingopyxis alaskensis RB2256 rod shape-determining protein MreC YP_616674.1 1708466 D 317655 CDS YP_616675.1 103487114 4081902 1709365..1709886 1 NC_008048.1 hypothetical protein 1709886 4081902 Sala_1629 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616675.1 1709365 D 317655 CDS YP_616676.1 103487115 4081903 1709897..1711807 1 NC_008048.1 peptidoglycan glycosyltransferase 1711807 4081903 Sala_1630 Sphingopyxis alaskensis RB2256 peptidoglycan glycosyltransferase YP_616676.1 1709897 D 317655 CDS YP_616677.1 103487116 4081904 1711942..1712910 1 NC_008048.1 rod shape-determining protein RodA 1712910 4081904 Sala_1631 Sphingopyxis alaskensis RB2256 rod shape-determining protein RodA YP_616677.1 1711942 D 317655 CDS YP_616678.1 103487117 4080710 complement(1713547..1714770) 1 NC_008048.1 acyl-CoA dehydrogenase-like protein 1714770 4080710 Sala_1632 Sphingopyxis alaskensis RB2256 acyl-CoA dehydrogenase-like protein YP_616678.1 1713547 R 317655 CDS YP_616679.1 103487118 4080711 complement(1714784..1715875) 1 NC_008048.1 acyl-CoA dehydrogenase-like protein 1715875 4080711 Sala_1633 Sphingopyxis alaskensis RB2256 acyl-CoA dehydrogenase-like protein YP_616679.1 1714784 R 317655 CDS YP_616680.1 103487119 4080712 1715966..1716766 1 NC_008048.1 enoyl-CoA hydratase/isomerase 1716766 4080712 Sala_1634 Sphingopyxis alaskensis RB2256 enoyl-CoA hydratase/isomerase YP_616680.1 1715966 D 317655 CDS YP_616681.1 103487120 4080713 1716792..1717880 1 NC_008048.1 acyl-CoA dehydrogenase-like protein 1717880 4080713 Sala_1635 Sphingopyxis alaskensis RB2256 acyl-CoA dehydrogenase-like protein YP_616681.1 1716792 D 317655 CDS YP_616682.1 103487121 4080714 1717877..1719082 1 NC_008048.1 acyl-CoA dehydrogenase-like protein 1719082 4080714 Sala_1636 Sphingopyxis alaskensis RB2256 acyl-CoA dehydrogenase-like protein YP_616682.1 1717877 D 317655 CDS YP_616683.1 103487122 4080715 1719101..1720351 1 NC_008048.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 1720351 4080715 Sala_1637 Sphingopyxis alaskensis RB2256 acetyl-CoA acetyltransferase YP_616683.1 1719101 D 317655 CDS YP_616684.1 103487123 4080716 1720378..1721358 1 NC_008048.1 2-nitropropane dioxygenase 1721358 4080716 Sala_1638 Sphingopyxis alaskensis RB2256 2-nitropropane dioxygenase YP_616684.1 1720378 D 317655 CDS YP_616685.1 103487124 4080717 1721785..1722630 1 NC_008048.1 ATPase 1722630 4080717 Sala_1639 Sphingopyxis alaskensis RB2256 ATPase YP_616685.1 1721785 D 317655 CDS YP_616686.1 103487125 4080718 1722635..1723051 1 NC_008048.1 hypothetical protein 1723051 4080718 Sala_1640 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616686.1 1722635 D 317655 CDS YP_616687.1 103487126 4080719 complement(1723042..1724484) 1 NC_008048.1 methyl-accepting chemotaxis sensory transducer 1724484 4080719 Sala_1641 Sphingopyxis alaskensis RB2256 methyl-accepting chemotaxis sensory transducer YP_616687.1 1723042 R 317655 CDS YP_616688.1 103487127 4080720 1724741..1725919 1 NC_008048.1 hypothetical protein 1725919 4080720 Sala_1642 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616688.1 1724741 D 317655 CDS YP_616689.1 103487128 4080721 1726074..1726880 1 NC_008048.1 hypothetical protein 1726880 4080721 Sala_1643 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616689.1 1726074 D 317655 CDS YP_616690.1 103487129 4080722 1726873..1727730 1 NC_008048.1 hypothetical protein 1727730 4080722 Sala_1644 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616690.1 1726873 D 317655 CDS YP_616691.1 103487130 4080723 complement(1727824..1729068) 1 NC_008048.1 twin-arginine translocation pathway signal 1729068 4080723 Sala_1645 Sphingopyxis alaskensis RB2256 twin-arginine translocation pathway signal YP_616691.1 1727824 R 317655 CDS YP_616692.1 103487131 4080724 complement(1729080..1730288) 1 NC_008048.1 hypothetical protein 1730288 4080724 Sala_1646 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616692.1 1729080 R 317655 CDS YP_616693.1 103487132 4080725 complement(1730285..1730851) 1 NC_008048.1 hypothetical protein 1730851 4080725 Sala_1647 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616693.1 1730285 R 317655 CDS YP_616694.1 103487133 4080726 complement(1730852..1731205) 1 NC_008048.1 excinuclease ABC subunit C 1731205 4080726 Sala_1648 Sphingopyxis alaskensis RB2256 excinuclease ABC subunit C YP_616694.1 1730852 R 317655 CDS YP_616695.1 103487134 4080957 1731220..1732488 1 NC_008048.1 tyrosyl-tRNA synthetase 1732488 4080957 Sala_1649 Sphingopyxis alaskensis RB2256 tyrosyl-tRNA synthetase YP_616695.1 1731220 D 317655 CDS YP_616696.1 103487135 4080958 1732562..1732903 1 NC_008048.1 type IV pilus assembly PilZ 1732903 4080958 Sala_1650 Sphingopyxis alaskensis RB2256 type IV pilus assembly PilZ YP_616696.1 1732562 D 317655 CDS YP_616697.1 103487136 4080959 complement(1732973..1735078) 1 NC_008048.1 DEAD/DEAH box helicase 1735078 4080959 Sala_1651 Sphingopyxis alaskensis RB2256 DEAD/DEAH box helicase YP_616697.1 1732973 R 317655 CDS YP_616698.1 103487137 4080960 1735286..1735546 1 NC_008048.1 hypothetical protein 1735546 4080960 Sala_1652 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616698.1 1735286 D 317655 CDS YP_616699.1 103487138 4080961 1735543..1739127 1 NC_008048.1 transcription-repair coupling factor 1739127 4080961 Sala_1653 Sphingopyxis alaskensis RB2256 transcription-repair coupling factor YP_616699.1 1735543 D 317655 CDS YP_616700.1 103487139 4080962 complement(1739233..1740429) 1 NC_008048.1 diguanylate cyclase/phosphodiesterase 1740429 4080962 Sala_1654 Sphingopyxis alaskensis RB2256 diguanylate cyclase/phosphodiesterase YP_616700.1 1739233 R 317655 CDS YP_616701.1 103487140 4080963 1740492..1741505 1 NC_008048.1 molybdenum cofactor synthesis-like protein 1741505 4080963 Sala_1655 Sphingopyxis alaskensis RB2256 molybdenum cofactor synthesis-like protein YP_616701.1 1740492 D 317655 CDS YP_616702.1 103487141 4080964 1741537..1742307 1 NC_008048.1 catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase 1742307 ppnK 4080964 ppnK Sphingopyxis alaskensis RB2256 inorganic polyphosphate/ATP-NAD kinase YP_616702.1 1741537 D 317655 CDS YP_616703.1 103487142 4080966 complement(1742646..1743242) 1 NC_008048.1 3,4-dihydroxy-2-butanone 4-phosphate synthase 1743242 4080966 Sala_1657 Sphingopyxis alaskensis RB2256 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_616703.1 1742646 R 317655 CDS YP_616704.1 103487143 4080967 complement(1743243..1743818) 1 NC_008048.1 NADPH-dependent FMN reductase 1743818 4080967 Sala_1658 Sphingopyxis alaskensis RB2256 NADPH-dependent FMN reductase YP_616704.1 1743243 R 317655 CDS YP_616705.1 103487144 4080968 complement(1743815..1745290) 1 NC_008048.1 in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; glycerol-3-phosphate dehydrogenase 1745290 4080968 Sala_1659 Sphingopyxis alaskensis RB2256 glycerol-3-phosphate dehydrogenase YP_616705.1 1743815 R 317655 CDS YP_616706.1 103487145 4080969 complement(1745320..1746408) 1 NC_008048.1 alkanesulfonate monooxygenase 1746408 4080969 Sala_1660 Sphingopyxis alaskensis RB2256 alkanesulfonate monooxygenase YP_616706.1 1745320 R 317655 CDS YP_616707.1 103487146 4080970 complement(1746483..1747397) 1 NC_008048.1 aldo/keto reductase 1747397 4080970 Sala_1661 Sphingopyxis alaskensis RB2256 aldo/keto reductase YP_616707.1 1746483 R 317655 CDS YP_616708.1 103487147 4080971 complement(1747394..1748407) 1 NC_008048.1 LacI family transcriptional regulator 1748407 4080971 Sala_1662 Sphingopyxis alaskensis RB2256 LacI family transcriptional regulator YP_616708.1 1747394 R 317655 CDS YP_616709.1 103487148 4080972 complement(1748404..1750449) 1 NC_008048.1 alpha-glucosidase 1750449 4080972 Sala_1663 Sphingopyxis alaskensis RB2256 alpha-glucosidase YP_616709.1 1748404 R 317655 CDS YP_616710.1 103487149 4080973 1750515..1752908 1 NC_008048.1 TonB-dependent receptor 1752908 4080973 Sala_1664 Sphingopyxis alaskensis RB2256 TonB-dependent receptor YP_616710.1 1750515 D 317655 CDS YP_616711.1 103487150 4080974 complement(1753134..1753391) 1 NC_008048.1 hypothetical protein 1753391 4080974 Sala_1665 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616711.1 1753134 R 317655 CDS YP_616712.1 103487151 4080975 complement(1753403..1754638) 1 NC_008048.1 major facilitator superfamily transporter 1754638 4080975 Sala_1666 Sphingopyxis alaskensis RB2256 major facilitator superfamily transporter YP_616712.1 1753403 R 317655 CDS YP_616713.1 103487152 4081050 1754744..1755844 1 NC_008048.1 hypothetical protein 1755844 4081050 Sala_1667 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616713.1 1754744 D 317655 CDS YP_616714.1 103487153 4081051 complement(1755865..1757178) 1 NC_008048.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 1757178 4081051 Sala_1668 Sphingopyxis alaskensis RB2256 coproporphyrinogen III oxidase YP_616714.1 1755865 R 317655 CDS YP_616715.1 103487154 4081052 complement(1757465..1757620) 1 NC_008048.1 cbb3-type cytochrome oxidase maturation protein 1757620 4081052 Sala_1669 Sphingopyxis alaskensis RB2256 cbb3-type cytochrome oxidase maturation protein YP_616715.1 1757465 R 317655 CDS YP_616716.1 103487155 4081053 complement(1757617..1759563) 1 NC_008048.1 heavy metal translocating P-type ATPase 1759563 4081053 Sala_1670 Sphingopyxis alaskensis RB2256 heavy metal translocating P-type ATPase YP_616716.1 1757617 R 317655 CDS YP_616717.1 103487156 4081054 complement(1759728..1760198) 1 NC_008048.1 integral membrane protein linked to a cation pump-like protein 1760198 4081054 Sala_1671 Sphingopyxis alaskensis RB2256 integral membrane protein linked to a cation pump-like protein YP_616717.1 1759728 R 317655 CDS YP_616718.1 103487157 4081055 complement(1760195..1761652) 1 NC_008048.1 4Fe-4S ferredoxin 1761652 4081055 Sala_1672 Sphingopyxis alaskensis RB2256 4Fe-4S ferredoxin YP_616718.1 1760195 R 317655 CDS YP_616719.1 103487158 4081056 complement(1761639..1762562) 1 NC_008048.1 cytochrome c oxidase, cbb3-type subunit III 1762562 4081056 Sala_1673 Sphingopyxis alaskensis RB2256 cytochrome c oxidase, cbb3-type subunit III YP_616719.1 1761639 R 317655 CDS YP_616720.1 103487159 4081057 complement(1762555..1762713) 1 NC_008048.1 cbb3-type cytochrome oxidase subunit 1762713 4081057 Sala_1674 Sphingopyxis alaskensis RB2256 cbb3-type cytochrome oxidase subunit YP_616720.1 1762555 R 317655 CDS YP_616721.1 103487160 4081058 complement(1762710..1763474) 1 NC_008048.1 CcoO; FixO; cbb3-type cytochrome c oxidase subunit II 1763474 4081058 Sala_1675 Sphingopyxis alaskensis RB2256 cbb3-type cytochrome c oxidase subunit II YP_616721.1 1762710 R 317655 CDS YP_616722.1 103487161 4081059 complement(1763487..1765145) 1 NC_008048.1 CcoN; FixN; cbb3-type cytochrome c oxidase subunit I 1765145 4081059 Sala_1676 Sphingopyxis alaskensis RB2256 cbb3-type cytochrome c oxidase subunit I YP_616722.1 1763487 R 317655 CDS YP_616723.1 103487162 4081060 1765313..1765984 1 NC_008048.1 OmpW protein 1765984 4081060 Sala_1677 Sphingopyxis alaskensis RB2256 OmpW protein YP_616723.1 1765313 D 317655 CDS YP_616724.1 103487163 4081061 complement(1765994..1766686) 1 NC_008048.1 Crp/FNR family transcriptional regulator 1766686 4081061 Sala_1678 Sphingopyxis alaskensis RB2256 Crp/FNR family transcriptional regulator YP_616724.1 1765994 R 317655 CDS YP_616725.1 103487164 4081062 complement(1766872..1767681) 1 NC_008048.1 hypothetical protein 1767681 4081062 Sala_1679 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616725.1 1766872 R 317655 CDS YP_616726.1 103487165 4081063 complement(1767810..1768754) 1 NC_008048.1 hypothetical protein 1768754 4081063 Sala_1680 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616726.1 1767810 R 317655 CDS YP_616727.1 103487166 4081064 complement(1768754..1768984) 1 NC_008048.1 hypothetical protein 1768984 4081064 Sala_1681 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616727.1 1768754 R 317655 CDS YP_616728.1 103487167 4081065 complement(1769047..1770798) 1 NC_008048.1 kinesin K39 1770798 4081065 Sala_1682 Sphingopyxis alaskensis RB2256 kinesin K39 YP_616728.1 1769047 R 317655 CDS YP_616729.1 103487168 4081066 complement(1770770..1772152) 1 NC_008048.1 radical SAM family protein 1772152 4081066 Sala_1683 Sphingopyxis alaskensis RB2256 radical SAM family protein YP_616729.1 1770770 R 317655 CDS YP_616730.1 103487169 4081067 complement(1772305..1774206) 1 NC_008048.1 radical SAM family protein 1774206 4081067 Sala_1684 Sphingopyxis alaskensis RB2256 radical SAM family protein YP_616730.1 1772305 R 317655 CDS YP_616731.1 103487170 4081068 complement(1774222..1774794) 1 NC_008048.1 hypothetical protein 1774794 4081068 Sala_1685 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616731.1 1774222 R 317655 CDS YP_616732.1 103487171 4081089 complement(1774937..1775617) 1 NC_008048.1 GntR family transcriptional regulator 1775617 4081089 Sala_1686 Sphingopyxis alaskensis RB2256 GntR family transcriptional regulator YP_616732.1 1774937 R 317655 CDS YP_616733.1 103487172 4081090 complement(1775614..1776963) 1 NC_008048.1 catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glutamate; N-formimino-L-glutamate deiminase 1776963 4081090 Sala_1687 Sphingopyxis alaskensis RB2256 N-formimino-L-glutamate deiminase YP_616733.1 1775614 R 317655 CDS YP_616734.1 103487173 4081091 1776993..1778204 1 NC_008048.1 imidazolonepropionase 1778204 4081091 Sala_1688 Sphingopyxis alaskensis RB2256 imidazolonepropionase YP_616734.1 1776993 D 317655 CDS YP_616735.1 103487174 4081092 1778201..1779730 1 NC_008048.1 catalyzes the degradation of histidine to urocanate and ammmonia; histidine ammonia-lyase 1779730 4081092 Sala_1689 Sphingopyxis alaskensis RB2256 histidine ammonia-lyase YP_616735.1 1778201 D 317655 CDS YP_616736.1 103487175 4081093 1779730..1780533 1 NC_008048.1 N-formylglutamate amidohydrolase 1780533 4081093 Sala_1690 Sphingopyxis alaskensis RB2256 N-formylglutamate amidohydrolase YP_616736.1 1779730 D 317655 CDS YP_616737.1 103487176 4081094 1780530..1782191 1 NC_008048.1 catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism; urocanate hydratase 1782191 4081094 Sala_1691 Sphingopyxis alaskensis RB2256 urocanate hydratase YP_616737.1 1780530 D 317655 CDS YP_616738.1 103487177 4081095 1782267..1783430 1 NC_008048.1 acyl-CoA dehydrogenase-like protein 1783430 4081095 Sala_1692 Sphingopyxis alaskensis RB2256 acyl-CoA dehydrogenase-like protein YP_616738.1 1782267 D 317655 CDS YP_616739.1 103487178 4081096 1783430..1784266 1 NC_008048.1 hypothetical protein 1784266 4081096 Sala_1693 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616739.1 1783430 D 317655 CDS YP_616740.1 103487179 4081097 1784487..1785284 1 NC_008048.1 hypothetical protein 1785284 4081097 Sala_1694 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616740.1 1784487 D 317655 CDS YP_616741.1 103487180 4081098 complement(1785381..1787165) 1 NC_008048.1 PAS/PAC sensor-containing diguanylate cyclase 1787165 4081098 Sala_1695 Sphingopyxis alaskensis RB2256 PAS/PAC sensor-containing diguanylate cyclase YP_616741.1 1785381 R 317655 CDS YP_616742.1 103487181 4081099 complement(1787227..1787835) 1 NC_008048.1 TetR family transcriptional regulator 1787835 4081099 Sala_1696 Sphingopyxis alaskensis RB2256 TetR family transcriptional regulator YP_616742.1 1787227 R 317655 CDS YP_616743.1 103487182 4081100 1787886..1788254 1 NC_008048.1 hypothetical protein 1788254 4081100 Sala_1697 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616743.1 1787886 D 317655 CDS YP_616744.1 103487183 4081101 1788271..1789713 1 NC_008048.1 carotenoid oxygenase 1789713 4081101 Sala_1698 Sphingopyxis alaskensis RB2256 carotenoid oxygenase YP_616744.1 1788271 D 317655 CDS YP_616745.1 103487184 4081102 1789793..1791037 1 NC_008048.1 hypothetical protein 1791037 4081102 Sala_1699 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616745.1 1789793 D 317655 CDS YP_616746.1 103487185 4081103 complement(1791135..1791512) 1 NC_008048.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 1791512 rplL 4081103 rplL Sphingopyxis alaskensis RB2256 50S ribosomal protein L7/L12 YP_616746.1 1791135 R 317655 CDS YP_616747.1 103487186 4081104 complement(1791571..1792086) 1 NC_008048.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 1792086 rplJ 4081104 rplJ Sphingopyxis alaskensis RB2256 50S ribosomal protein L10 YP_616747.1 1791571 R 317655 CDS YP_616748.1 103487187 4081105 1792507..1792812 1 NC_008048.1 hypothetical protein 1792812 4081105 Sala_1702 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616748.1 1792507 D 317655 CDS YP_616749.1 103487188 4081106 complement(1792831..1793469) 1 NC_008048.1 hypothetical protein 1793469 4081106 Sala_1703 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616749.1 1792831 R 317655 CDS YP_616750.1 103487189 4081107 complement(1793509..1794906) 1 NC_008048.1 amino acid permease 1794906 4081107 Sala_1704 Sphingopyxis alaskensis RB2256 amino acid permease YP_616750.1 1793509 R 317655 CDS YP_616751.1 103487190 4081108 1795038..1796084 1 NC_008048.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 1796084 obgE 4081108 obgE Sphingopyxis alaskensis RB2256 GTPase ObgE YP_616751.1 1795038 D 317655 CDS YP_616752.1 103487191 4081283 complement(1796119..1797180) 1 NC_008048.1 type 12 methyltransferase 1797180 4081283 Sala_1706 Sphingopyxis alaskensis RB2256 type 12 methyltransferase YP_616752.1 1796119 R 317655 CDS YP_616753.1 103487192 4081284 complement(1797330..1798439) 1 NC_008048.1 Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F 1798439 recF 4081284 recF Sphingopyxis alaskensis RB2256 recombination protein F YP_616753.1 1797330 R 317655 CDS YP_616754.1 103487193 4081285 1798882..1799061 1 NC_008048.1 phage shock protein C, PspC 1799061 4081285 Sala_1708 Sphingopyxis alaskensis RB2256 phage shock protein C, PspC YP_616754.1 1798882 D 317655 CDS YP_616755.1 103487194 4081286 complement(1799155..1800294) 1 NC_008048.1 alcohol dehydrogenase GroES-like protein 1800294 4081286 Sala_1709 Sphingopyxis alaskensis RB2256 alcohol dehydrogenase GroES-like protein YP_616755.1 1799155 R 317655 CDS YP_616756.1 103487195 4081287 complement(1800501..1801067) 1 NC_008048.1 hypothetical protein 1801067 4081287 Sala_1710 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616756.1 1800501 R 317655 CDS YP_616757.1 103487196 4081288 1801073..1801633 1 NC_008048.1 XRE family transcriptional regulator 1801633 4081288 Sala_1711 Sphingopyxis alaskensis RB2256 XRE family transcriptional regulator YP_616757.1 1801073 D 317655 CDS YP_616758.1 103487197 4081289 1801740..1802906 1 NC_008048.1 group 1 glycosyl transferase 1802906 4081289 Sala_1712 Sphingopyxis alaskensis RB2256 group 1 glycosyl transferase YP_616758.1 1801740 D 317655 CDS YP_616759.1 103487198 4081290 complement(1803090..1804073) 1 NC_008048.1 SecF protein 1804073 4081290 Sala_1713 Sphingopyxis alaskensis RB2256 SecF protein YP_616759.1 1803090 R 317655 CDS YP_616760.1 103487199 4081291 complement(1804090..1805703) 1 NC_008048.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 1805703 secD 4081291 secD Sphingopyxis alaskensis RB2256 preprotein translocase subunit SecD YP_616760.1 1804090 R 317655 CDS YP_616761.1 103487200 4081292 complement(1805760..1806296) 1 NC_008048.1 preprotein translocase subunit YajC 1806296 4081292 Sala_1715 Sphingopyxis alaskensis RB2256 preprotein translocase subunit YajC YP_616761.1 1805760 R 317655 CDS YP_616762.1 103487201 4081294 complement(1806504..1807481) 1 NC_008048.1 zinc-binding alcohol dehydrogenase 1807481 4081294 Sala_1716 Sphingopyxis alaskensis RB2256 zinc-binding alcohol dehydrogenase YP_616762.1 1806504 R 317655 CDS YP_616763.1 103487202 4081295 1807554..1808123 1 NC_008048.1 hypothetical protein 1808123 4081295 Sala_1717 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616763.1 1807554 D 317655 CDS YP_616764.1 103487203 4081296 1808177..1808590 1 NC_008048.1 hypothetical protein 1808590 4081296 Sala_1718 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616764.1 1808177 D 317655 CDS YP_616765.1 103487204 4081297 complement(1808694..1809179) 1 NC_008048.1 hypothetical protein 1809179 4081297 Sala_1719 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616765.1 1808694 R 317655 CDS YP_616766.1 103487205 4081298 complement(1809176..1811830) 1 NC_008048.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 1811830 alaS 4081298 alaS Sphingopyxis alaskensis RB2256 alanyl-tRNA synthetase YP_616766.1 1809176 R 317655 CDS YP_616767.1 103487206 4081299 complement(1811903..1812478) 1 NC_008048.1 hypothetical protein 1812478 4081299 Sala_1721 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616767.1 1811903 R 317655 CDS YP_616768.1 103487207 4081300 complement(1812468..1813094) 1 NC_008048.1 glutathione S-transferase-like protein 1813094 4081300 Sala_1722 Sphingopyxis alaskensis RB2256 glutathione S-transferase-like protein YP_616768.1 1812468 R 317655 CDS YP_616769.1 103487208 4081185 complement(1813120..1813935) 1 NC_008048.1 arginase/agmatinase/formiminoglutamase 1813935 4081185 Sala_1723 Sphingopyxis alaskensis RB2256 arginase/agmatinase/formiminoglutamase YP_616769.1 1813120 R 317655 CDS YP_616770.1 103487209 4081186 complement(1814021..1814335) 1 NC_008048.1 hypothetical protein 1814335 4081186 Sala_1724 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616770.1 1814021 R 317655 CDS YP_616771.1 103487210 4081187 complement(1814454..1815536) 1 NC_008048.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 1815536 recA 4081187 recA Sphingopyxis alaskensis RB2256 recombinase A YP_616771.1 1814454 R 317655 CDS YP_616772.1 103487211 4081188 complement(1815689..1816036) 1 NC_008048.1 response regulator receiver protein 1816036 4081188 Sala_1726 Sphingopyxis alaskensis RB2256 response regulator receiver protein YP_616772.1 1815689 R 317655 CDS YP_616773.1 103487212 4081189 complement(1816029..1818410) 1 NC_008048.1 periplasmic sensor hybrid histidine kinase 1818410 4081189 Sala_1727 Sphingopyxis alaskensis RB2256 periplasmic sensor hybrid histidine kinase YP_616773.1 1816029 R 317655 CDS YP_616774.1 103487213 4081190 complement(1818503..1820563) 1 NC_008048.1 endothelin-converting protein 1 1820563 4081190 Sala_1728 Sphingopyxis alaskensis RB2256 endothelin-converting protein 1 YP_616774.1 1818503 R 317655 CDS YP_616775.1 103487214 4081191 complement(1820660..1821325) 1 NC_008048.1 hypothetical protein 1821325 4081191 Sala_1729 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616775.1 1820660 R 317655 CDS YP_616776.1 103487215 4081192 complement(1821322..1821807) 1 NC_008048.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 1821807 smpB 4081192 smpB Sphingopyxis alaskensis RB2256 SsrA-binding protein YP_616776.1 1821322 R 317655 CDS YP_616777.1 103487216 4081193 complement(1821946..1822821) 1 NC_008048.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 1822821 4081193 Sala_1731 Sphingopyxis alaskensis RB2256 dihydrodipicolinate synthase YP_616777.1 1821946 R 317655 CDS YP_616778.1 103487217 4081194 1822922..1824961 1 NC_008048.1 lytic transglycosylase, catalytic 1824961 4081194 Sala_1732 Sphingopyxis alaskensis RB2256 lytic transglycosylase, catalytic YP_616778.1 1822922 D 317655 CDS YP_616779.1 103487218 4081195 1824969..1825451 1 NC_008048.1 transcription elongation factor GreB 1825451 4081195 Sala_1733 Sphingopyxis alaskensis RB2256 transcription elongation factor GreB YP_616779.1 1824969 D 317655 CDS YP_616780.1 103487219 4081196 complement(1825455..1827167) 1 NC_008048.1 peptidase C14, caspase catalytic subunit p20 1827167 4081196 Sala_1734 Sphingopyxis alaskensis RB2256 peptidase C14, caspase catalytic subunit p20 YP_616780.1 1825455 R 317655 CDS YP_616781.1 103487220 4081197 complement(1828067..1828756) 1 NC_008048.1 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD 1828756 4081197 Sala_1735 Sphingopyxis alaskensis RB2256 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD YP_616781.1 1828067 R 317655 CDS YP_616782.1 103487221 4081198 complement(1828824..1829696) 1 NC_008048.1 chemotaxis protein CheR 1829696 4081198 Sala_1736 Sphingopyxis alaskensis RB2256 chemotaxis protein CheR YP_616782.1 1828824 R 317655 CDS YP_616783.1 103487222 4081199 complement(1829693..1830805) 1 NC_008048.1 response regulator receiver modulated CheB methylesterase 1830805 4081199 Sala_1737 Sphingopyxis alaskensis RB2256 response regulator receiver modulated CheB methylesterase YP_616783.1 1829693 R 317655 CDS YP_616784.1 103487223 4081200 complement(1830824..1831198) 1 NC_008048.1 response regulator receiver protein 1831198 4081200 Sala_1738 Sphingopyxis alaskensis RB2256 response regulator receiver protein YP_616784.1 1830824 R 317655 CDS YP_616785.1 103487224 4081201 complement(1831275..1831712) 1 NC_008048.1 CheW protein 1831712 4081201 Sala_1739 Sphingopyxis alaskensis RB2256 CheW protein YP_616785.1 1831275 R 317655 CDS YP_616786.1 103487225 4081202 complement(1831709..1834132) 1 NC_008048.1 CheA signal transduction histidine kinase 1834132 4081202 Sala_1740 Sphingopyxis alaskensis RB2256 CheA signal transduction histidine kinase YP_616786.1 1831709 R 317655 CDS YP_616787.1 103487226 4081203 complement(1834173..1834817) 1 NC_008048.1 hypothetical protein 1834817 4081203 Sala_1741 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616787.1 1834173 R 317655 CDS YP_616788.1 103487227 4081204 1834820..1835950 1 NC_008048.1 pseudouridine synthase RluD 1835950 4081204 Sala_1742 Sphingopyxis alaskensis RB2256 pseudouridine synthase RluD YP_616788.1 1834820 D 317655 CDS YP_616789.1 103487228 4081978 1836030..1836932 1 NC_008048.1 binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32 1836932 4081978 Sala_1743 Sphingopyxis alaskensis RB2256 RNA polymerase factor sigma-32 YP_616789.1 1836030 D 317655 CDS YP_616790.1 103487229 4081979 1837022..1837810 1 NC_008048.1 response regulator receiver protein 1837810 4081979 Sala_1744 Sphingopyxis alaskensis RB2256 response regulator receiver protein YP_616790.1 1837022 D 317655 CDS YP_616791.1 103487230 4081980 1837889..1838986 1 NC_008048.1 peptidase M23B 1838986 4081980 Sala_1745 Sphingopyxis alaskensis RB2256 peptidase M23B YP_616791.1 1837889 D 317655 CDS YP_616792.1 103487231 4081981 1839060..1839701 1 NC_008048.1 hypothetical protein 1839701 4081981 Sala_1746 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616792.1 1839060 D 317655 CDS YP_616793.1 103487232 4081982 1839761..1840468 1 NC_008048.1 monofunctional biosynthetic peptidoglycan transglycosylase 1840468 4081982 Sala_1747 Sphingopyxis alaskensis RB2256 monofunctional biosynthetic peptidoglycan transglycosylase YP_616793.1 1839761 D 317655 CDS YP_616794.1 103487233 4081983 complement(1840669..1841214) 1 NC_008048.1 heat shock protein DnaJ-like protein 1841214 4081983 Sala_1748 Sphingopyxis alaskensis RB2256 heat shock protein DnaJ-like protein YP_616794.1 1840669 R 317655 CDS YP_616795.1 103487234 4081984 complement(1841266..1842057) 1 NC_008048.1 hypothetical protein 1842057 4081984 Sala_1749 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616795.1 1841266 R 317655 CDS YP_616796.1 103487235 4081985 complement(1842156..1843028) 1 NC_008048.1 alpha/beta hydrolase 1843028 4081985 Sala_1750 Sphingopyxis alaskensis RB2256 alpha/beta hydrolase YP_616796.1 1842156 R 317655 CDS YP_616797.1 103487236 4081986 complement(1843032..1844891) 1 NC_008048.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 1844891 aspS 4081986 aspS Sphingopyxis alaskensis RB2256 aspartyl-tRNA synthetase YP_616797.1 1843032 R 317655 CDS YP_616798.1 103487237 4081987 1845105..1846292 1 NC_008048.1 ribonuclease D 1846292 4081987 Sala_1752 Sphingopyxis alaskensis RB2256 ribonuclease D YP_616798.1 1845105 D 317655 CDS YP_616799.1 103487238 4081988 complement(1846348..1847847) 1 NC_008048.1 Ppx/GppA phosphatase 1847847 4081988 Sala_1753 Sphingopyxis alaskensis RB2256 Ppx/GppA phosphatase YP_616799.1 1846348 R 317655 CDS YP_616800.1 103487239 4081989 complement(1847844..1850012) 1 NC_008048.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 1850012 4081989 Sala_1754 Sphingopyxis alaskensis RB2256 polyphosphate kinase YP_616800.1 1847844 R 317655 CDS YP_616801.1 103487240 4081990 complement(1850003..1850665) 1 NC_008048.1 DNA replication initiation ATPase 1850665 4081990 Sala_1755 Sphingopyxis alaskensis RB2256 DNA replication initiation ATPase YP_616801.1 1850003 R 317655 CDS YP_616802.1 103487241 4081991 complement(1850665..1851939) 1 NC_008048.1 hypothetical protein 1851939 4081991 Sala_1756 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616802.1 1850665 R 317655 CDS YP_616803.1 103487242 4081992 1852025..1853131 1 NC_008048.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 1853131 4081992 Sala_1757 Sphingopyxis alaskensis RB2256 phosphoribosylaminoimidazole synthetase YP_616803.1 1852025 D 317655 CDS YP_616804.1 103487243 4081993 1853279..1854226 1 NC_008048.1 phosphoribosylglycinamide formyltransferase 1854226 4081993 Sala_1758 Sphingopyxis alaskensis RB2256 phosphoribosylglycinamide formyltransferase YP_616804.1 1853279 D 317655 CDS YP_616805.1 103487244 4081994 complement(1854284..1854706) 1 NC_008048.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 1854706 ndk 4081994 ndk Sphingopyxis alaskensis RB2256 nucleoside diphosphate kinase YP_616805.1 1854284 R 317655 CDS YP_616806.1 103487245 4081995 complement(1854793..1855242) 1 NC_008048.1 DNA polymerase III chi subunit, HolC 1855242 4081995 Sala_1760 Sphingopyxis alaskensis RB2256 DNA polymerase III chi subunit, HolC YP_616806.1 1854793 R 317655 CDS YP_616807.1 103487246 4081996 complement(1855377..1856822) 1 NC_008048.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 1856822 4081996 Sala_1761 Sphingopyxis alaskensis RB2256 leucyl aminopeptidase YP_616807.1 1855377 R 317655 CDS YP_616808.1 103487247 4082074 1856955..1859258 1 NC_008048.1 organic solvent tolerance protein 1859258 4082074 Sala_1762 Sphingopyxis alaskensis RB2256 organic solvent tolerance protein YP_616808.1 1856955 D 317655 CDS YP_616809.1 103487248 4082075 complement(1859454..1861019) 1 NC_008048.1 AMP-dependent synthetase and ligase 1861019 4082075 Sala_1763 Sphingopyxis alaskensis RB2256 AMP-dependent synthetase and ligase YP_616809.1 1859454 R 317655 CDS YP_616810.1 103487249 4082076 1861278..1861526 1 NC_008048.1 hypothetical protein 1861526 4082076 Sala_1764 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616810.1 1861278 D 317655 CDS YP_616811.1 103487250 4082077 complement(1861545..1862567) 1 NC_008048.1 aminoglycoside phosphotransferase 1862567 4082077 Sala_1765 Sphingopyxis alaskensis RB2256 aminoglycoside phosphotransferase YP_616811.1 1861545 R 317655 CDS YP_616812.1 103487251 4082078 complement(1862613..1863035) 1 NC_008048.1 hypothetical protein 1863035 4082078 Sala_1766 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616812.1 1862613 R 317655 CDS YP_616813.1 103487252 4082079 1863452..1864402 1 NC_008048.1 integrase catalytic subunit 1864402 4082079 Sala_1767 Sphingopyxis alaskensis RB2256 integrase catalytic subunit YP_616813.1 1863452 D 317655 CDS YP_616814.1 103487253 4082080 1864453..1864908 1 NC_008048.1 MarR family transcriptional regulator 1864908 4082080 Sala_1768 Sphingopyxis alaskensis RB2256 MarR family transcriptional regulator YP_616814.1 1864453 D 317655 CDS YP_616815.1 103487254 4082081 complement(1864963..1865910) 1 NC_008048.1 Sua5/YciO/YrdC/YwlC 1865910 4082081 Sala_1769 Sphingopyxis alaskensis RB2256 Sua5/YciO/YrdC/YwlC YP_616815.1 1864963 R 317655 CDS YP_616816.1 103487255 4082082 1865963..1867705 1 NC_008048.1 acyl-CoA dehydrogenase-like protein 1867705 4082082 Sala_1770 Sphingopyxis alaskensis RB2256 acyl-CoA dehydrogenase-like protein YP_616816.1 1865963 D 317655 CDS YP_616817.1 103487256 4082083 1867820..1870111 1 NC_008048.1 diguanylate phosphodiesterase 1870111 4082083 Sala_1771 Sphingopyxis alaskensis RB2256 diguanylate phosphodiesterase YP_616817.1 1867820 D 317655 CDS YP_616818.1 103487257 4082084 complement(1870218..1870496) 1 NC_008048.1 hypothetical protein 1870496 4082084 Sala_1772 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616818.1 1870218 R 317655 CDS YP_616819.1 103487258 4082085 1870880..1872910 1 NC_008048.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 1872910 4082085 Sala_1773 Sphingopyxis alaskensis RB2256 ribonucleotide-diphosphate reductase subunit alpha YP_616819.1 1870880 D 317655 CDS YP_616820.1 103487259 4082086 1872979..1873419 1 NC_008048.1 hypothetical protein 1873419 4082086 Sala_1774 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616820.1 1872979 D 317655 CDS YP_616821.1 103487260 4082087 1873486..1874550 1 NC_008048.1 B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE; ribonucleotide-diphosphate reductase subunit beta 1874550 nrdF 4082087 nrdF Sphingopyxis alaskensis RB2256 ribonucleotide-diphosphate reductase subunit beta YP_616821.1 1873486 D 317655 CDS YP_616822.1 103487261 4082088 1874714..1874884 1 NC_008048.1 hypothetical protein 1874884 4082088 Sala_1776 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616822.1 1874714 D 317655 CDS YP_616823.1 103487262 4082089 1874868..1875122 1 NC_008048.1 hypothetical protein 1875122 4082089 Sala_1777 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616823.1 1874868 D 317655 CDS YP_616824.1 103487263 4082090 1875290..1875520 1 NC_008048.1 hypothetical protein 1875520 4082090 Sala_1778 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616824.1 1875290 D 317655 CDS YP_616825.1 103487264 4082092 complement(1876468..1877418) 1 NC_008048.1 integrase catalytic subunit 1877418 4082092 Sala_1780 Sphingopyxis alaskensis RB2256 integrase catalytic subunit YP_616825.1 1876468 R 317655 CDS YP_616826.1 103487265 4082093 1878170..1878889 1 NC_008048.1 manganese and iron superoxide dismutase 1878889 4082093 Sala_1781 Sphingopyxis alaskensis RB2256 manganese and iron superoxide dismutase YP_616826.1 1878170 D 317655 CDS YP_616827.1 103487266 4082249 complement(1878884..1879234) 1 NC_008048.1 hypothetical protein 1879234 4082249 Sala_1782 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616827.1 1878884 R 317655 CDS YP_616828.1 103487267 4082250 complement(1879250..1882372) 1 NC_008048.1 acriflavin resistance protein 1882372 4082250 Sala_1783 Sphingopyxis alaskensis RB2256 acriflavin resistance protein YP_616828.1 1879250 R 317655 CDS YP_616829.1 103487268 4082251 complement(1882384..1883958) 1 NC_008048.1 secretion protein HlyD 1883958 4082251 Sala_1784 Sphingopyxis alaskensis RB2256 secretion protein HlyD YP_616829.1 1882384 R 317655 CDS YP_616830.1 103487269 4082252 complement(1884124..1885338) 1 NC_008048.1 outer membrane efflux protein 1885338 4082252 Sala_1785 Sphingopyxis alaskensis RB2256 outer membrane efflux protein YP_616830.1 1884124 R 317655 CDS YP_616831.1 103487270 4082253 1885351..1885941 1 NC_008048.1 hypothetical protein 1885941 4082253 Sala_1786 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616831.1 1885351 D 317655 CDS YP_616832.1 103487271 4082254 complement(1885976..1886215) 1 NC_008048.1 hypothetical protein 1886215 4082254 Sala_1787 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616832.1 1885976 R 317655 CDS YP_616833.1 103487272 4082255 1886334..1886585 1 NC_008048.1 hypothetical protein 1886585 4082255 Sala_1788 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616833.1 1886334 D 317655 CDS YP_616834.1 103487273 4082257 complement(1886805..1887284) 1 NC_008048.1 hypothetical protein 1887284 4082257 Sala_1789 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616834.1 1886805 R 317655 CDS YP_616835.1 103487274 4082258 complement(1887296..1887556) 1 NC_008048.1 glutaredoxin GrxC 1887556 4082258 Sala_1790 Sphingopyxis alaskensis RB2256 glutaredoxin GrxC YP_616835.1 1887296 R 317655 CDS YP_616836.1 103487275 4082259 1888530..1889312 1 NC_008048.1 type 12 methyltransferase 1889312 4082259 Sala_1791 Sphingopyxis alaskensis RB2256 type 12 methyltransferase YP_616836.1 1888530 D 317655 CDS YP_616837.1 103487276 4082260 complement(1889313..1889741) 1 NC_008048.1 NUDIX hydrolase 1889741 4082260 Sala_1792 Sphingopyxis alaskensis RB2256 NUDIX hydrolase YP_616837.1 1889313 R 317655 CDS YP_616838.1 103487277 4082261 1889743..1890063 1 NC_008048.1 hypothetical protein 1890063 4082261 Sala_1793 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616838.1 1889743 D 317655 CDS YP_616839.1 103487278 4082262 1890124..1890288 1 NC_008048.1 Flp/Fap pilin component 1890288 4082262 Sala_1794 Sphingopyxis alaskensis RB2256 Flp/Fap pilin component YP_616839.1 1890124 D 317655 CDS YP_616840.1 103487279 4082263 complement(1890380..1891921) 1 NC_008048.1 peptidase M48, Ste24p 1891921 4082263 Sala_1795 Sphingopyxis alaskensis RB2256 peptidase M48, Ste24p YP_616840.1 1890380 R 317655 CDS YP_616841.1 103487280 4082264 complement(1892029..1892976) 1 NC_008048.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha 1892976 4082264 Sala_1796 Sphingopyxis alaskensis RB2256 acetyl-CoA carboxylase carboxyltransferase subunit alpha YP_616841.1 1892029 R 317655 CDS YP_616842.1 103487281 4082265 complement(1892986..1893897) 1 NC_008048.1 phage integrase 1893897 4082265 Sala_1797 Sphingopyxis alaskensis RB2256 phage integrase YP_616842.1 1892986 R 317655 CDS YP_616843.1 103487282 4082266 complement(1893890..1895677) 1 NC_008048.1 hypothetical protein 1895677 4082266 Sala_1798 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616843.1 1893890 R 317655 CDS YP_616844.1 103487283 4082190 1895819..1896394 1 NC_008048.1 shikimate kinase 1896394 4082190 Sala_1799 Sphingopyxis alaskensis RB2256 shikimate kinase YP_616844.1 1895819 D 317655 CDS YP_616845.1 103487284 4082191 1896382..1897488 1 NC_008048.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 1897488 aroB 4082191 aroB Sphingopyxis alaskensis RB2256 3-dehydroquinate synthase YP_616845.1 1896382 D 317655 CDS YP_616846.1 103487285 4082192 complement(1897539..1898003) 1 NC_008048.1 hypothetical protein 1898003 4082192 Sala_1801 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616846.1 1897539 R 317655 CDS YP_616847.1 103487286 4082193 complement(1897996..1898346) 1 NC_008048.1 ArsR family transcriptional regulator 1898346 4082193 Sala_1802 Sphingopyxis alaskensis RB2256 ArsR family transcriptional regulator YP_616847.1 1897996 R 317655 CDS YP_616848.1 103487287 4082194 complement(1898481..1900379) 1 NC_008048.1 sodium/hydrogen exchanger 1900379 4082194 Sala_1803 Sphingopyxis alaskensis RB2256 sodium/hydrogen exchanger YP_616848.1 1898481 R 317655 CDS YP_616849.1 103487288 4082195 complement(1900376..1900804) 1 NC_008048.1 Fe-S cluster formation protein 1900804 4082195 Sala_1804 Sphingopyxis alaskensis RB2256 Fe-S cluster formation protein YP_616849.1 1900376 R 317655 CDS YP_616850.1 103487289 4082196 complement(1900801..1901337) 1 NC_008048.1 colicin V production protein 1901337 4082196 Sala_1805 Sphingopyxis alaskensis RB2256 colicin V production protein YP_616850.1 1900801 R 317655 CDS YP_616851.1 103487290 4082197 complement(1901348..1902709) 1 NC_008048.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 1902709 4082197 Sala_1806 Sphingopyxis alaskensis RB2256 DNA repair protein RadA YP_616851.1 1901348 R 317655 CDS YP_616852.1 103487291 4082198 1902928..1903578 1 NC_008048.1 similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity; putative translaldolase 1903578 4082198 Sala_1807 Sphingopyxis alaskensis RB2256 putative translaldolase YP_616852.1 1902928 D 317655 CDS YP_616853.1 103487292 4082199 1903762..1904556 1 NC_008048.1 enoyl-CoA hydratase/isomerase 1904556 4082199 Sala_1808 Sphingopyxis alaskensis RB2256 enoyl-CoA hydratase/isomerase YP_616853.1 1903762 D 317655 CDS YP_616854.1 103487293 4082200 1904676..1906172 1 NC_008048.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 1906172 4082200 Sala_1809 Sphingopyxis alaskensis RB2256 acetyl-CoA acetyltransferase YP_616854.1 1904676 D 317655 CDS YP_616855.1 103487294 4082201 complement(1906291..1907814) 1 NC_008048.1 aldehyde dehydrogenase 1907814 4082201 Sala_1810 Sphingopyxis alaskensis RB2256 aldehyde dehydrogenase YP_616855.1 1906291 R 317655 CDS YP_616856.1 103487295 4082202 1907951..1909915 1 NC_008048.1 acetate--CoA ligase 1909915 4082202 Sala_1811 Sphingopyxis alaskensis RB2256 acetate--CoA ligase YP_616856.1 1907951 D 317655 CDS YP_616857.1 103487296 4082203 complement(1910025..1910756) 1 NC_008048.1 20S proteasome, A and B subunits 1910756 4082203 Sala_1812 Sphingopyxis alaskensis RB2256 20S proteasome, A and B subunits YP_616857.1 1910025 R 317655 CDS YP_616858.1 103487297 4082204 complement(1910804..1911607) 1 NC_008048.1 transglutaminase 1911607 4082204 Sala_1813 Sphingopyxis alaskensis RB2256 transglutaminase YP_616858.1 1910804 R 317655 CDS YP_616859.1 103487298 4082205 complement(1911610..1912551) 1 NC_008048.1 hypothetical protein 1912551 4082205 Sala_1814 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616859.1 1911610 R 317655 CDS YP_616860.1 103487299 4082206 complement(1912682..1914121) 1 NC_008048.1 hypothetical protein 1914121 4082206 Sala_1815 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616860.1 1912682 R 317655 CDS YP_616861.1 103487300 4082207 1914292..1914573 1 NC_008048.1 hypothetical protein 1914573 4082207 Sala_1816 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616861.1 1914292 D 317655 CDS YP_616862.1 103487301 4082208 complement(1914629..1917364) 1 NC_008048.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 1917364 4082208 Sala_1817 Sphingopyxis alaskensis RB2256 preprotein translocase subunit SecA YP_616862.1 1914629 R 317655 CDS YP_616863.1 103487302 4082209 complement(1917481..1917747) 1 NC_008048.1 hypothetical protein 1917747 4082209 Sala_1818 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616863.1 1917481 R 317655 CDS YP_616864.1 103487303 4082171 complement(1918302..1918805) 1 NC_008048.1 hypothetical protein 1918805 4082171 Sala_1819 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616864.1 1918302 R 317655 CDS YP_616865.1 103487304 4082172 1918915..1919718 1 NC_008048.1 short chain dehydrogenase 1919718 4082172 Sala_1820 Sphingopyxis alaskensis RB2256 short chain dehydrogenase YP_616865.1 1918915 D 317655 CDS YP_616866.1 103487305 4082173 complement(1919906..1920553) 1 NC_008048.1 cytochrome c-type biogenesis protein CcmB 1920553 4082173 Sala_1821 Sphingopyxis alaskensis RB2256 cytochrome c-type biogenesis protein CcmB YP_616866.1 1919906 R 317655 CDS YP_616867.1 103487306 4082174 complement(1920663..1921247) 1 NC_008048.1 heme exporter protein CcmA 1921247 4082174 Sala_1822 Sphingopyxis alaskensis RB2256 heme exporter protein CcmA YP_616867.1 1920663 R 317655 CDS YP_616868.1 103487307 4082175 complement(1921244..1921663) 1 NC_008048.1 hypothetical protein 1921663 4082175 Sala_1823 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616868.1 1921244 R 317655 CDS YP_616869.1 103487308 4082176 complement(1921647..1921898) 1 NC_008048.1 hypothetical protein 1921898 4082176 Sala_1824 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616869.1 1921647 R 317655 CDS YP_616870.1 103487309 4082177 1921903..1922271 1 NC_008048.1 transcriptional coactivator/pterin dehydratase 1922271 4082177 Sala_1825 Sphingopyxis alaskensis RB2256 transcriptional coactivator/pterin dehydratase YP_616870.1 1921903 D 317655 CDS YP_616871.1 103487310 4082178 complement(1922279..1922623) 1 NC_008048.1 arsenate reductase 1922623 4082178 Sala_1826 Sphingopyxis alaskensis RB2256 arsenate reductase YP_616871.1 1922279 R 317655 CDS YP_616872.1 103487311 4082179 1922795..1923532 1 NC_008048.1 twin-arginine translocation pathway signal 1923532 4082179 Sala_1827 Sphingopyxis alaskensis RB2256 twin-arginine translocation pathway signal YP_616872.1 1922795 D 317655 CDS YP_616873.1 103487312 4082180 complement(1923626..1924336) 1 NC_008048.1 hypothetical protein 1924336 4082180 Sala_1828 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616873.1 1923626 R 317655 CDS YP_616874.1 103487313 4082181 complement(1924391..1925137) 1 NC_008048.1 hypothetical protein 1925137 4082181 Sala_1829 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616874.1 1924391 R 317655 CDS YP_616875.1 103487314 4082182 1925239..1925418 1 NC_008048.1 hypothetical protein 1925418 4082182 Sala_1830 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616875.1 1925239 D 317655 CDS YP_616876.1 103487315 4082183 1925390..1926598 1 NC_008048.1 hypothetical protein 1926598 4082183 Sala_1831 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616876.1 1925390 D 317655 CDS YP_616877.1 103487316 4082184 1926744..1928576 1 NC_008048.1 DEAD/DEAH box helicase 1928576 4082184 Sala_1832 Sphingopyxis alaskensis RB2256 DEAD/DEAH box helicase YP_616877.1 1926744 D 317655 CDS YP_616878.1 103487317 4082185 1928780..1929766 1 NC_008048.1 zinc-binding alcohol dehydrogenase 1929766 4082185 Sala_1833 Sphingopyxis alaskensis RB2256 zinc-binding alcohol dehydrogenase YP_616878.1 1928780 D 317655 CDS YP_616879.1 103487318 4082186 complement(1929863..1930711) 1 NC_008048.1 carboxylesterase 1930711 4082186 Sala_1834 Sphingopyxis alaskensis RB2256 carboxylesterase YP_616879.1 1929863 R 317655 CDS YP_616880.1 103487319 4082187 complement(1930708..1931211) 1 NC_008048.1 YbaK/prolyl-tRNA synthetase associated domain-containing protein 1931211 4082187 Sala_1835 Sphingopyxis alaskensis RB2256 YbaK/prolyl-tRNA synthetase associated domain-containing protein YP_616880.1 1930708 R 317655 CDS YP_616881.1 103487320 4082188 complement(1931221..1931601) 1 NC_008048.1 glyoxalase/bleomycin resistance protein/dioxygenase 1931601 4082188 Sala_1836 Sphingopyxis alaskensis RB2256 glyoxalase/bleomycin resistance protein/dioxygenase YP_616881.1 1931221 R 317655 CDS YP_616882.1 103487321 4082189 complement(1931717..1932589) 1 NC_008048.1 formyltetrahydrofolate deformylase 1932589 4082189 Sala_1837 Sphingopyxis alaskensis RB2256 formyltetrahydrofolate deformylase YP_616882.1 1931717 R 317655 CDS YP_616883.1 103487322 4082016 complement(1932591..1932977) 1 NC_008048.1 glyoxalase/bleomycin resistance protein/dioxygenase 1932977 4082016 Sala_1838 Sphingopyxis alaskensis RB2256 glyoxalase/bleomycin resistance protein/dioxygenase YP_616883.1 1932591 R 317655 CDS YP_616884.1 103487323 4082017 complement(1932992..1934104) 1 NC_008048.1 zinc-binding alcohol dehydrogenase 1934104 4082017 Sala_1839 Sphingopyxis alaskensis RB2256 zinc-binding alcohol dehydrogenase YP_616884.1 1932992 R 317655 CDS YP_616885.1 103487324 4082018 complement(1934202..1934720) 1 NC_008048.1 N-acetyltransferase GCN5 1934720 4082018 Sala_1840 Sphingopyxis alaskensis RB2256 N-acetyltransferase GCN5 YP_616885.1 1934202 R 317655 CDS YP_616886.1 103487325 4082019 complement(1934968..1935360) 1 NC_008048.1 hypothetical protein 1935360 4082019 Sala_1841 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616886.1 1934968 R 317655 CDS YP_616887.1 103487326 4082020 complement(1935505..1936755) 1 NC_008048.1 catalyzes the formation of 2-oxobutanoate from L-threonine; threonine dehydratase 1936755 4082020 Sala_1842 Sphingopyxis alaskensis RB2256 threonine dehydratase YP_616887.1 1935505 R 317655 CDS YP_616888.1 103487327 4082021 1937250..1938128 1 NC_008048.1 6-phosphogluconate dehydrogenase 1938128 4082021 Sala_1843 Sphingopyxis alaskensis RB2256 6-phosphogluconate dehydrogenase YP_616888.1 1937250 D 317655 CDS YP_616889.1 103487328 4082022 1938125..1939789 1 NC_008048.1 amidohydrolase 3 1939789 4082022 Sala_1844 Sphingopyxis alaskensis RB2256 amidohydrolase 3 YP_616889.1 1938125 D 317655 CDS YP_616890.1 103487329 4082023 1939779..1941047 1 NC_008048.1 FAD dependent oxidoreductase 1941047 4082023 Sala_1845 Sphingopyxis alaskensis RB2256 FAD dependent oxidoreductase YP_616890.1 1939779 D 317655 CDS YP_616891.1 103487330 4082024 1941166..1942314 1 NC_008048.1 (S)-2-hydroxy-acid oxidase 1942314 4082024 Sala_1846 Sphingopyxis alaskensis RB2256 (S)-2-hydroxy-acid oxidase YP_616891.1 1941166 D 317655 CDS YP_616892.1 103487331 4082025 complement(1942511..1943266) 1 NC_008048.1 hypothetical protein 1943266 4082025 Sala_1847 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616892.1 1942511 R 317655 CDS YP_616893.1 103487332 4082026 1943525..1944676 1 NC_008048.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1944676 ispG 4082026 ispG Sphingopyxis alaskensis RB2256 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_616893.1 1943525 D 317655 CDS YP_616894.1 103487333 4082027 1944983..1945906 1 NC_008048.1 hypothetical protein 1945906 4082027 Sala_1849 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616894.1 1944983 D 317655 CDS YP_616895.1 103487334 4082028 1945938..1946420 1 NC_008048.1 N-acetyltransferase GCN5 1946420 4082028 Sala_1850 Sphingopyxis alaskensis RB2256 N-acetyltransferase GCN5 YP_616895.1 1945938 D 317655 CDS YP_616896.1 103487335 4082029 1946570..1947037 1 NC_008048.1 hypothetical protein 1947037 4082029 Sala_1851 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616896.1 1946570 D 317655 CDS YP_616897.1 103487336 4082030 complement(1947083..1947280) 1 NC_008048.1 hypothetical protein 1947280 4082030 Sala_1852 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616897.1 1947083 R 317655 CDS YP_616898.1 103487337 4082031 complement(1947293..1948447) 1 NC_008048.1 hypothetical protein 1948447 4082031 Sala_1853 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616898.1 1947293 R 317655 CDS YP_616899.1 103487338 4082032 complement(1948609..1950126) 1 NC_008048.1 propionyl-CoA carboxylase 1950126 4082032 Sala_1854 Sphingopyxis alaskensis RB2256 propionyl-CoA carboxylase YP_616899.1 1948609 R 317655 CDS YP_616900.1 103487339 4082033 1950195..1950974 1 NC_008048.1 short-chain dehydrogenase/reductase SDR 1950974 4082033 Sala_1855 Sphingopyxis alaskensis RB2256 short-chain dehydrogenase/reductase SDR YP_616900.1 1950195 D 317655 CDS YP_616901.1 103487340 4082034 1951124..1952023 1 NC_008048.1 hypothetical protein 1952023 4082034 Sala_1856 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616901.1 1951124 D 317655 CDS YP_616902.1 103487341 4082035 complement(1952204..1952476) 1 NC_008048.1 flavoprotein 1952476 4082035 Sala_1857 Sphingopyxis alaskensis RB2256 flavoprotein YP_616902.1 1952204 R 317655 CDS YP_616903.1 103487342 4080172 complement(1952645..1953151) 1 NC_008048.1 MarR family transcriptional regulator 1953151 4080172 Sala_1858 Sphingopyxis alaskensis RB2256 MarR family transcriptional regulator YP_616903.1 1952645 R 317655 CDS YP_616904.1 103487343 4080173 complement(1953318..1954613) 1 NC_008048.1 acyl-CoA dehydrogenase-like protein 1954613 4080173 Sala_1859 Sphingopyxis alaskensis RB2256 acyl-CoA dehydrogenase-like protein YP_616904.1 1953318 R 317655 CDS YP_616905.1 103487344 4080174 complement(1954632..1955975) 1 NC_008048.1 aminoglycoside phosphotransferase 1955975 4080174 Sala_1860 Sphingopyxis alaskensis RB2256 aminoglycoside phosphotransferase YP_616905.1 1954632 R 317655 CDS YP_616906.1 103487345 4080175 complement(1956144..1957037) 1 NC_008048.1 hypothetical protein 1957037 4080175 Sala_1861 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616906.1 1956144 R 317655 CDS YP_616907.1 103487346 4080177 1957385..1958386 1 NC_008048.1 hypothetical protein 1958386 4080177 Sala_1862 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616907.1 1957385 D 317655 CDS YP_616908.1 103487347 4080178 1958383..1959003 1 NC_008048.1 glutathione S-transferase-like protein 1959003 4080178 Sala_1863 Sphingopyxis alaskensis RB2256 glutathione S-transferase-like protein YP_616908.1 1958383 D 317655 CDS YP_616909.1 103487348 4080179 complement(1959250..1959498) 1 NC_008048.1 hypothetical protein 1959498 4080179 Sala_1864 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616909.1 1959250 R 317655 CDS YP_616910.1 103487349 4080180 complement(1959625..1961184) 1 NC_008048.1 activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 1961184 4080180 Sala_1865 Sphingopyxis alaskensis RB2256 long-chain-fatty-acid--CoA ligase YP_616910.1 1959625 R 317655 CDS YP_616911.1 103487350 4080181 complement(1961285..1962391) 1 NC_008048.1 hypothetical protein 1962391 4080181 Sala_1866 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616911.1 1961285 R 317655 CDS YP_616912.1 103487351 4080182 complement(1962469..1964022) 1 NC_008048.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein; glycine dehydrogenase subunit 2 1964022 4080182 Sala_1867 Sphingopyxis alaskensis RB2256 glycine dehydrogenase subunit 2 YP_616912.1 1962469 R 317655 CDS YP_616913.1 103487352 4080183 complement(1964019..1965377) 1 NC_008048.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 2 to form the P protein; glycine dehydrogenase subunit 1 1965377 4080183 Sala_1868 Sphingopyxis alaskensis RB2256 glycine dehydrogenase subunit 1 YP_616913.1 1964019 R 317655 CDS YP_616914.1 103487353 4080184 complement(1965381..1966205) 1 NC_008048.1 hypothetical protein 1966205 4080184 Sala_1869 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616914.1 1965381 R 317655 CDS YP_616915.1 103487354 4080185 complement(1966243..1966614) 1 NC_008048.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 1966614 4080185 Sala_1870 Sphingopyxis alaskensis RB2256 glycine cleavage system protein H YP_616915.1 1966243 R 317655 CDS YP_616916.1 103487355 4080186 complement(1966618..1967742) 1 NC_008048.1 catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T 1967742 gcvT 4080186 gcvT Sphingopyxis alaskensis RB2256 glycine cleavage system aminomethyltransferase T YP_616916.1 1966618 R 317655 CDS YP_616917.1 103487356 4082617 complement(1968062..1968709) 1 NC_008048.1 NAD-dependent epimerase/dehydratase 1968709 4082617 Sala_1872 Sphingopyxis alaskensis RB2256 NAD-dependent epimerase/dehydratase YP_616917.1 1968062 R 317655 CDS YP_616918.1 103487357 4082618 complement(1968702..1969874) 1 NC_008048.1 deoxyguanosinetriphosphate triphosphohydrolase 1969874 4082618 Sala_1873 Sphingopyxis alaskensis RB2256 deoxyguanosinetriphosphate triphosphohydrolase YP_616918.1 1968702 R 317655 CDS YP_616919.1 103487358 4082619 complement(1969871..1971496) 1 NC_008048.1 sporulation related protein 1971496 4082619 Sala_1874 Sphingopyxis alaskensis RB2256 sporulation related protein YP_616919.1 1969871 R 317655 CDS YP_616920.1 103487359 4082620 complement(1971556..1973004) 1 NC_008048.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 1973004 4082620 Sala_1875 Sphingopyxis alaskensis RB2256 cell division protein FtsZ YP_616920.1 1971556 R 317655 CDS YP_616921.1 103487360 4082621 complement(1973157..1974413) 1 NC_008048.1 cell division protein FtsA 1974413 4082621 Sala_1876 Sphingopyxis alaskensis RB2256 cell division protein FtsA YP_616921.1 1973157 R 317655 CDS YP_616922.1 103487361 4082622 complement(1974417..1975355) 1 NC_008048.1 cell division protein FtsQ 1975355 4082622 Sala_1877 Sphingopyxis alaskensis RB2256 cell division protein FtsQ YP_616922.1 1974417 R 317655 CDS YP_616923.1 103487362 4082623 complement(1975366..1976292) 1 NC_008048.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase 1976292 ddl 4082623 ddl Sphingopyxis alaskensis RB2256 D-alanine--D-alanine ligase YP_616923.1 1975366 R 317655 CDS YP_616924.1 103487363 4082624 complement(1976289..1977188) 1 NC_008048.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 1977188 murB 4082624 murB Sphingopyxis alaskensis RB2256 UDP-N-acetylenolpyruvoylglucosamine reductase YP_616924.1 1976289 R 317655 CDS YP_616925.1 103487364 4082625 complement(1977319..1978752) 1 NC_008048.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 1978752 murC 4082625 murC Sphingopyxis alaskensis RB2256 UDP-N-acetylmuramate--L-alanine ligase YP_616925.1 1977319 R 317655 CDS YP_616926.1 103487365 4082626 complement(1978752..1979930) 1 NC_008048.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 1979930 murG 4082626 murG Sphingopyxis alaskensis RB2256 undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase YP_616926.1 1978752 R 317655 CDS YP_616927.1 103487366 4082627 complement(1979941..1981173) 1 NC_008048.1 cell cycle protein 1981173 4082627 Sala_1882 Sphingopyxis alaskensis RB2256 cell cycle protein YP_616927.1 1979941 R 317655 CDS YP_616928.1 103487367 4082628 complement(1981307..1982611) 1 NC_008048.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase 1982611 4082628 Sala_1883 Sphingopyxis alaskensis RB2256 UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_616928.1 1981307 R 317655 CDS YP_616929.1 103487368 4082629 complement(1982608..1983678) 1 NC_008048.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 1983678 mraY 4082629 mraY Sphingopyxis alaskensis RB2256 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_616929.1 1982608 R 317655 CDS YP_616930.1 103487369 4082630 complement(1983678..1985057) 1 NC_008048.1 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase 1985057 4082630 Sala_1885 Sphingopyxis alaskensis RB2256 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase YP_616930.1 1983678 R 317655 CDS YP_616931.1 103487370 4082631 complement(1985054..1986493) 1 NC_008048.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 1986493 murE 4082631 murE Sphingopyxis alaskensis RB2256 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_616931.1 1985054 R 317655 CDS YP_616932.1 103487371 4082632 complement(1986493..1988181) 1 NC_008048.1 peptidoglycan glycosyltransferase 1988181 4082632 Sala_1887 Sphingopyxis alaskensis RB2256 peptidoglycan glycosyltransferase YP_616932.1 1986493 R 317655 CDS YP_616933.1 103487372 4082633 complement(1988178..1988771) 1 NC_008048.1 hypothetical protein 1988771 4082633 Sala_1888 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616933.1 1988178 R 317655 CDS YP_616934.1 103487373 4082634 complement(1988771..1989748) 1 NC_008048.1 S-adenosyl-methyltransferase MraW 1989748 mraW 4082634 mraW Sphingopyxis alaskensis RB2256 S-adenosyl-methyltransferase MraW YP_616934.1 1988771 R 317655 CDS YP_616935.1 103487374 4082635 complement(1989745..1990245) 1 NC_008048.1 hypothetical protein 1990245 4082635 Sala_1890 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616935.1 1989745 R 317655 CDS YP_616936.1 103487375 4082597 complement(1990521..1991672) 1 NC_008048.1 hypothetical protein 1991672 4082597 Sala_1891 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616936.1 1990521 R 317655 CDS YP_616937.1 103487376 4082598 complement(1991681..1992082) 1 NC_008048.1 hypothetical protein 1992082 4082598 Sala_1892 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616937.1 1991681 R 317655 CDS YP_616938.1 103487377 4082599 complement(1992079..1993059) 1 NC_008048.1 CysK; forms a complex with serine acetyltransferase CysE; functions in cysteine biosynthesis; cysteine synthase A 1993059 4082599 Sala_1893 Sphingopyxis alaskensis RB2256 cysteine synthase A YP_616938.1 1992079 R 317655 CDS YP_616939.1 103487378 4082600 1993256..1995385 1 NC_008048.1 TonB-dependent receptor 1995385 4082600 Sala_1894 Sphingopyxis alaskensis RB2256 TonB-dependent receptor YP_616939.1 1993256 D 317655 CDS YP_616940.1 103487379 4082601 complement(1995430..1995969) 1 NC_008048.1 hypothetical protein 1995969 4082601 Sala_1895 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616940.1 1995430 R 317655 CDS YP_616941.1 103487380 4082602 complement(1996000..1996743) 1 NC_008048.1 3-oxoacyl-(acyl-carrier-protein) reductase 1996743 4082602 Sala_1896 Sphingopyxis alaskensis RB2256 3-oxoacyl-(acyl-carrier-protein) reductase YP_616941.1 1996000 R 317655 CDS YP_616942.1 103487381 4082603 complement(1996768..1997706) 1 NC_008048.1 malonyl CoA-acyl carrier protein transacylase 1997706 4082603 Sala_1897 Sphingopyxis alaskensis RB2256 malonyl CoA-acyl carrier protein transacylase YP_616942.1 1996768 R 317655 CDS YP_616943.1 103487382 4082604 complement(1997835..1998662) 1 NC_008048.1 peptidase U61, LD-carboxypeptidase A 1998662 4082604 Sala_1898 Sphingopyxis alaskensis RB2256 peptidase U61, LD-carboxypeptidase A YP_616943.1 1997835 R 317655 CDS YP_616944.1 103487383 4082605 1998874..2000262 1 NC_008048.1 Mur ligase, middle region 2000262 4082605 Sala_1899 Sphingopyxis alaskensis RB2256 Mur ligase, middle region YP_616944.1 1998874 D 317655 CDS YP_616945.1 103487384 4082606 2000423..2000791 1 NC_008048.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 2000791 rpsF 4082606 rpsF Sphingopyxis alaskensis RB2256 30S ribosomal protein S6 YP_616945.1 2000423 D 317655 CDS YP_616946.1 103487385 4082607 2000803..2001027 1 NC_008048.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 2001027 rpsR 4082607 rpsR Sphingopyxis alaskensis RB2256 30S ribosomal protein S18 YP_616946.1 2000803 D 317655 CDS YP_616947.1 103487386 4082608 2001041..2001673 1 NC_008048.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 2001673 rplI 4082608 rplI Sphingopyxis alaskensis RB2256 50S ribosomal protein L9 YP_616947.1 2001041 D 317655 CDS YP_616948.1 103487387 4082609 complement(2001751..2002629) 1 NC_008048.1 LysR family transcriptional regulator 2002629 4082609 Sala_1903 Sphingopyxis alaskensis RB2256 LysR family transcriptional regulator YP_616948.1 2001751 R 317655 CDS YP_616949.1 103487388 4082610 2002725..2003594 1 NC_008048.1 beta-lactamase-like protein 2003594 4082610 Sala_1904 Sphingopyxis alaskensis RB2256 beta-lactamase-like protein YP_616949.1 2002725 D 317655 CDS YP_616950.1 103487389 4082611 complement(2003634..2004824) 1 NC_008048.1 sporulation related protein 2004824 4082611 Sala_1905 Sphingopyxis alaskensis RB2256 sporulation related protein YP_616950.1 2003634 R 317655 CDS YP_616951.1 103487390 4082612 2005083..2005805 1 NC_008048.1 plasmid partitioning-family protein 2005805 4082612 Sala_1906 Sphingopyxis alaskensis RB2256 plasmid partitioning-family protein YP_616951.1 2005083 D 317655 CDS YP_616952.1 103487391 4082613 2005823..2006485 1 NC_008048.1 hypothetical protein 2006485 4082613 Sala_1907 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616952.1 2005823 D 317655 CDS YP_616953.1 103487392 4082614 2006508..2007911 1 NC_008048.1 sporulation related protein 2007911 4082614 Sala_1908 Sphingopyxis alaskensis RB2256 sporulation related protein YP_616953.1 2006508 D 317655 CDS YP_616954.1 103487393 4082615 2008069..2009106 1 NC_008048.1 hypothetical protein 2009106 4082615 Sala_1909 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616954.1 2008069 D 317655 CDS YP_616955.1 103487394 4082616 2009118..2009774 1 NC_008048.1 putative hydroxylase 2009774 4082616 Sala_1910 Sphingopyxis alaskensis RB2256 putative hydroxylase YP_616955.1 2009118 D 317655 CDS YP_616956.1 103487395 4082767 complement(2009778..2010380) 1 NC_008048.1 GTP cyclohydrolase I 2010380 4082767 Sala_1911 Sphingopyxis alaskensis RB2256 GTP cyclohydrolase I YP_616956.1 2009778 R 317655 CDS YP_616957.1 103487396 4082768 2010815..2013724 1 NC_008048.1 TonB-dependent receptor 2013724 4082768 Sala_1912 Sphingopyxis alaskensis RB2256 TonB-dependent receptor YP_616957.1 2010815 D 317655 CDS YP_616958.1 103487397 4082769 complement(2013866..2016454) 1 NC_008048.1 TonB-dependent receptor 2016454 4082769 Sala_1913 Sphingopyxis alaskensis RB2256 TonB-dependent receptor YP_616958.1 2013866 R 317655 CDS YP_616959.1 103487398 4082771 complement(2017011..2018003) 1 NC_008048.1 ribonuclease 2018003 4082771 Sala_1914 Sphingopyxis alaskensis RB2256 ribonuclease YP_616959.1 2017011 R 317655 CDS YP_616960.1 103487399 4082772 complement(2017996..2018568) 1 NC_008048.1 maf protein 2018568 4082772 Sala_1915 Sphingopyxis alaskensis RB2256 maf protein YP_616960.1 2017996 R 317655 CDS YP_616961.1 103487400 4082773 complement(2018583..2018801) 1 NC_008048.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 2018801 infA 4082773 infA Sphingopyxis alaskensis RB2256 translation initiation factor IF-1 YP_616961.1 2018583 R 317655 CDS YP_616962.1 103487401 4082774 complement(2018874..2019749) 1 NC_008048.1 transcription factor jumonji, JmjC 2019749 4082774 Sala_1917 Sphingopyxis alaskensis RB2256 transcription factor jumonji, JmjC YP_616962.1 2018874 R 317655 CDS YP_616963.1 103487402 4082775 complement(2019746..2020930) 1 NC_008048.1 hypothetical protein 2020930 4082775 Sala_1918 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616963.1 2019746 R 317655 CDS YP_616964.1 103487403 4082776 complement(2021312..2023207) 1 NC_008048.1 asparagine synthase 2023207 4082776 Sala_1919 Sphingopyxis alaskensis RB2256 asparagine synthase YP_616964.1 2021312 R 317655 CDS YP_616965.1 103487404 4082777 complement(2023217..2024695) 1 NC_008048.1 ABC transporter 2024695 4082777 Sala_1920 Sphingopyxis alaskensis RB2256 ABC transporter YP_616965.1 2023217 R 317655 CDS YP_616966.1 103487405 4082778 complement(2024692..2025897) 1 NC_008048.1 group 1 glycosyl transferase 2025897 4082778 Sala_1921 Sphingopyxis alaskensis RB2256 group 1 glycosyl transferase YP_616966.1 2024692 R 317655 CDS YP_616967.1 103487406 4082779 complement(2026032..2027099) 1 NC_008048.1 hypothetical protein 2027099 4082779 Sala_1922 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616967.1 2026032 R 317655 CDS YP_616968.1 103487407 4082780 complement(2027096..2027956) 1 NC_008048.1 polysaccharide deacetylase 2027956 4082780 Sala_1923 Sphingopyxis alaskensis RB2256 polysaccharide deacetylase YP_616968.1 2027096 R 317655 CDS YP_616969.1 103487408 4082781 complement(2028002..2029246) 1 NC_008048.1 hypothetical protein 2029246 4082781 Sala_1924 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616969.1 2028002 R 317655 CDS YP_616970.1 103487409 4082782 complement(2029269..2030975) 1 NC_008048.1 hypothetical protein 2030975 4082782 Sala_1925 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616970.1 2029269 R 317655 CDS YP_616971.1 103487410 4082783 complement(2030975..2031967) 1 NC_008048.1 protein-tyrosine kinase 2031967 4082783 Sala_1926 Sphingopyxis alaskensis RB2256 protein-tyrosine kinase YP_616971.1 2030975 R 317655 CDS YP_616972.1 103487411 4082784 complement(2031982..2033511) 1 NC_008048.1 lipopolysaccharide biosynthesis protein 2033511 4082784 Sala_1927 Sphingopyxis alaskensis RB2256 lipopolysaccharide biosynthesis protein YP_616972.1 2031982 R 317655 CDS YP_616973.1 103487412 4082877 complement(2033560..2034216) 1 NC_008048.1 polysaccharide export protein 2034216 4082877 Sala_1928 Sphingopyxis alaskensis RB2256 polysaccharide export protein YP_616973.1 2033560 R 317655 CDS YP_616974.1 103487413 4082878 complement(2034388..2035617) 1 NC_008048.1 Orn/DAP/Arg decarboxylase 2 2035617 4082878 Sala_1929 Sphingopyxis alaskensis RB2256 Orn/DAP/Arg decarboxylase 2 YP_616974.1 2034388 R 317655 CDS YP_616975.1 103487414 4082879 complement(2035614..2037146) 1 NC_008048.1 AMP-dependent synthetase and ligase 2037146 4082879 Sala_1930 Sphingopyxis alaskensis RB2256 AMP-dependent synthetase and ligase YP_616975.1 2035614 R 317655 CDS YP_616976.1 103487415 4082880 2037182..2038171 1 NC_008048.1 hypothetical protein 2038171 4082880 Sala_1931 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616976.1 2037182 D 317655 CDS YP_616977.1 103487416 4082881 2038168..2038446 1 NC_008048.1 hypothetical protein 2038446 4082881 Sala_1932 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616977.1 2038168 D 317655 CDS YP_616978.1 103487417 4082882 2038541..2039233 1 NC_008048.1 hypothetical protein 2039233 4082882 Sala_1933 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616978.1 2038541 D 317655 CDS YP_616979.1 103487418 4082883 2039218..2040012 1 NC_008048.1 alpha/beta hydrolase 2040012 4082883 Sala_1934 Sphingopyxis alaskensis RB2256 alpha/beta hydrolase YP_616979.1 2039218 D 317655 CDS YP_616980.1 103487419 4082884 complement(2040111..2042204) 1 NC_008048.1 catalyzes the formation of malate from glyoxylate and acetyl-CoA; malate synthase G 2042204 4082884 Sala_1935 Sphingopyxis alaskensis RB2256 malate synthase G YP_616980.1 2040111 R 317655 CDS YP_616981.1 103487420 4082885 2042340..2042672 1 NC_008048.1 hypothetical protein 2042672 4082885 Sala_1936 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616981.1 2042340 D 317655 CDS YP_616982.1 103487421 4082886 2042684..2042941 1 NC_008048.1 hypothetical protein 2042941 4082886 Sala_1937 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616982.1 2042684 D 317655 CDS YP_616983.1 103487422 4082887 complement(2042976..2044151) 1 NC_008048.1 diguanylate cyclase 2044151 4082887 Sala_1938 Sphingopyxis alaskensis RB2256 diguanylate cyclase YP_616983.1 2042976 R 317655 CDS YP_616984.1 103487423 4082888 2044332..2045540 1 NC_008048.1 hypothetical protein 2045540 4082888 Sala_1939 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616984.1 2044332 D 317655 CDS YP_616985.1 103487424 4082889 2045546..2046538 1 NC_008048.1 arginine N-succinyltransferase 2046538 4082889 Sala_1940 Sphingopyxis alaskensis RB2256 arginine N-succinyltransferase YP_616985.1 2045546 D 317655 CDS YP_616986.1 103487425 4082890 2046540..2047787 1 NC_008048.1 catalyzes the hydrolysis of 2-N-succinylarginine into 2-N-succinylornithine, ammonia and carbon dioxide in arginine degradation; succinylarginine dihydrolase 2047787 4082890 Sala_1941 Sphingopyxis alaskensis RB2256 succinylarginine dihydrolase YP_616986.1 2046540 D 317655 CDS YP_616987.1 103487426 4082891 2047794..2048465 1 NC_008048.1 hypothetical protein 2048465 4082891 Sala_1942 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616987.1 2047794 D 317655 CDS YP_616988.1 103487427 4082892 2048670..2048915 1 NC_008048.1 hypothetical protein 2048915 4082892 Sala_1943 Sphingopyxis alaskensis RB2256 hypothetical protein YP_616988.1 2048670 D 317655 CDS YP_616989.1 103487428 4082893 2048964..2049713 1 NC_008048.1 alpha/beta hydrolase 2049713 4082893 Sala_1944 Sphingopyxis alaskensis RB2256 alpha/beta hydrolase YP_616989.1 2048964 D 317655 CDS YP_616990.1 103487429 4082894 complement(2049670..2050710) 1 NC_008048.1 alpha/beta hydrolase 2050710 4082894 Sala_1945 Sphingopyxis alaskensis RB2256 alpha/beta hydrolase YP_616990.1 2049670 R 317655 CDS YP_616991.1 103487430 4082895 complement(2050771..2052396) 1 NC_008048.1 major facilitator superfamily transporter 2052396 4082895 Sala_1946 Sphingopyxis alaskensis RB2256 major facilitator superfamily transporter YP_616991.1 2050771 R 317655 CDS YP_616992.1 103487431 4082896 complement(2052468..2053847) 1 NC_008048.1 DEAD/DEAH box helicase 2053847 4082896 Sala_1947 Sphingopyxis alaskensis RB2256 DEAD/DEAH box helicase YP_616992.1 2052468 R 317655 CDS YP_616993.1 103487432 4080497 2054275..2055747 1 NC_008048.1 carbohydrate kinase 2055747 4080497 Sala_1948 Sphingopyxis alaskensis RB2256 carbohydrate kinase YP_616993.1 2054275 D 317655 CDS YP_616994.1 103487433 4080498 complement(2055789..2056016) 1 NC_008048.1 RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 2056016 rpmE 4080498 rpmE Sphingopyxis alaskensis RB2256 50S ribosomal protein L31 YP_616994.1 2055789 R 317655 CDS YP_616995.1 103487434 4080499 complement(2056184..2056645) 1 NC_008048.1 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 2056645 4080499 Sala_1950 Sphingopyxis alaskensis RB2256 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ YP_616995.1 2056184 R 317655 CDS YP_616996.1 103487435 4080500 complement(2056672..2057358) 1 NC_008048.1 outer membrane chaperone Skp 2057358 4080500 Sala_1951 Sphingopyxis alaskensis RB2256 outer membrane chaperone Skp YP_616996.1 2056672 R 317655 CDS YP_616997.1 103487436 4080501 complement(2057358..2060021) 1 NC_008048.1 surface antigen (D15) 2060021 4080501 Sala_1952 Sphingopyxis alaskensis RB2256 surface antigen (D15) YP_616997.1 2057358 R 317655 CDS YP_616998.1 103487437 4080502 complement(2060102..2061187) 1 NC_008048.1 peptidase M50 membrane-associated zinc metallopeptidase 2061187 4080502 Sala_1953 Sphingopyxis alaskensis RB2256 peptidase M50 membrane-associated zinc metallopeptidase YP_616998.1 2060102 R 317655 CDS YP_616999.1 103487438 4080503 complement(2061228..2062391) 1 NC_008048.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2062391 4080503 Sala_1954 Sphingopyxis alaskensis RB2256 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_616999.1 2061228 R 317655 CDS YP_617000.1 103487439 4080504 complement(2062393..2063058) 1 NC_008048.1 phosphatidate cytidylyltransferase 2063058 4080504 Sala_1955 Sphingopyxis alaskensis RB2256 phosphatidate cytidylyltransferase YP_617000.1 2062393 R 317655 CDS YP_617001.1 103487440 4080505 complement(2063061..2063747) 1 NC_008048.1 undecaprenyl diphosphate synthase 2063747 4080505 Sala_1956 Sphingopyxis alaskensis RB2256 undecaprenyl diphosphate synthase YP_617001.1 2063061 R 317655 CDS YP_617002.1 103487441 4080506 complement(2063871..2064425) 1 NC_008048.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 2064425 frr 4080506 frr Sphingopyxis alaskensis RB2256 ribosome recycling factor YP_617002.1 2063871 R 317655 CDS YP_617003.1 103487442 4080507 complement(2064568..2065293) 1 NC_008048.1 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 2065293 pyrH 4080507 pyrH Sphingopyxis alaskensis RB2256 uridylate kinase YP_617003.1 2064568 R 317655 CDS YP_617004.1 103487443 4080508 complement(2065409..2066335) 1 NC_008048.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 2066335 tsf 4080508 tsf Sphingopyxis alaskensis RB2256 elongation factor Ts YP_617004.1 2065409 R 317655 CDS YP_617005.1 103487444 4080509 complement(2066467..2067300) 1 NC_008048.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 2067300 rpsB 4080509 rpsB Sphingopyxis alaskensis RB2256 30S ribosomal protein S2 YP_617005.1 2066467 R 317655 CDS YP_617006.1 103487445 4080510 2067614..2067877 1 NC_008048.1 hypothetical protein 2067877 4080510 Sala_1961 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617006.1 2067614 D 317655 CDS YP_617007.1 103487446 4080511 complement(2067861..2068643) 1 NC_008048.1 CDP-alcohol phosphatidyltransferase 2068643 4080511 Sala_1962 Sphingopyxis alaskensis RB2256 CDP-alcohol phosphatidyltransferase YP_617007.1 2067861 R 317655 CDS YP_617008.1 103487447 4080512 complement(2068645..2069433) 1 NC_008048.1 catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase 2069433 4080512 Sala_1963 Sphingopyxis alaskensis RB2256 phosphatidylserine decarboxylase YP_617008.1 2068645 R 317655 CDS YP_617009.1 103487448 4080513 2069542..2070756 1 NC_008048.1 Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase 2070756 4080513 Sala_1964 Sphingopyxis alaskensis RB2256 isocitrate dehydrogenase YP_617009.1 2069542 D 317655 CDS YP_617010.1 103487449 4080514 2071104..2072888 1 NC_008048.1 sodium/hydrogen exchanger 2072888 4080514 Sala_1965 Sphingopyxis alaskensis RB2256 sodium/hydrogen exchanger YP_617010.1 2071104 D 317655 CDS YP_617011.1 103487450 4080515 complement(2072900..2075836) 1 NC_008048.1 peptidase M16-like protein 2075836 4080515 Sala_1966 Sphingopyxis alaskensis RB2256 peptidase M16-like protein YP_617011.1 2072900 R 317655 CDS YP_617012.1 103487451 4081011 2075920..2076780 1 NC_008048.1 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 2076780 4081011 Sala_1967 Sphingopyxis alaskensis RB2256 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_617012.1 2075920 D 317655 CDS YP_617013.1 103487452 4081012 2076787..2077656 1 NC_008048.1 hypothetical protein 2077656 4081012 Sala_1968 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617013.1 2076787 D 317655 CDS YP_617014.1 103487453 4081013 complement(2077550..2078377) 1 NC_008048.1 NUDIX hydrolase 2078377 4081013 Sala_1969 Sphingopyxis alaskensis RB2256 NUDIX hydrolase YP_617014.1 2077550 R 317655 CDS YP_617015.1 103487454 4081014 2078459..2079094 1 NC_008048.1 putative transmembrane protein 2079094 4081014 Sala_1970 Sphingopyxis alaskensis RB2256 putative transmembrane protein YP_617015.1 2078459 D 317655 CDS YP_617016.1 103487455 4081015 complement(2079098..2080321) 1 NC_008048.1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2080321 4081015 Sala_1971 Sphingopyxis alaskensis RB2256 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_617016.1 2079098 R 317655 CDS YP_617017.1 103487456 4081016 complement(2080429..2080683) 1 NC_008048.1 hypothetical protein 2080683 4081016 Sala_1972 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617017.1 2080429 R 317655 CDS YP_617018.1 103487457 4081017 complement(2080695..2081747) 1 NC_008048.1 Glu/Leu/Phe/Val dehydrogenase 2081747 4081017 Sala_1973 Sphingopyxis alaskensis RB2256 Glu/Leu/Phe/Val dehydrogenase YP_617018.1 2080695 R 317655 CDS YP_617019.1 103487458 4081018 2081872..2082342 1 NC_008048.1 AsnC family transcriptional regulator 2082342 4081018 Sala_1974 Sphingopyxis alaskensis RB2256 AsnC family transcriptional regulator YP_617019.1 2081872 D 317655 CDS YP_617020.1 103487459 4081020 complement(2083542..2084531) 1 NC_008048.1 mandelate racemase/muconate lactonizing protein 2084531 4081020 Sala_1976 Sphingopyxis alaskensis RB2256 mandelate racemase/muconate lactonizing protein YP_617020.1 2083542 R 317655 CDS YP_617021.1 103487460 4081021 2084556..2084951 1 NC_008048.1 hypothetical protein 2084951 4081021 Sala_1977 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617021.1 2084556 D 317655 CDS YP_617022.1 103487461 4081022 2085053..2087212 1 NC_008048.1 prolyl oligopeptidase 2087212 4081022 Sala_1978 Sphingopyxis alaskensis RB2256 prolyl oligopeptidase YP_617022.1 2085053 D 317655 CDS YP_617023.1 103487462 4081023 2087214..2087699 1 NC_008048.1 putative GAF sensor protein 2087699 4081023 Sala_1979 Sphingopyxis alaskensis RB2256 putative GAF sensor protein YP_617023.1 2087214 D 317655 CDS YP_617024.1 103487463 4081024 2088086..2088877 1 NC_008048.1 17 kDa surface antigen 2088877 4081024 Sala_1980 Sphingopyxis alaskensis RB2256 17 kDa surface antigen YP_617024.1 2088086 D 317655 CDS YP_617025.1 103487464 4081025 2089089..2089619 1 NC_008048.1 hypothetical protein 2089619 4081025 Sala_1981 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617025.1 2089089 D 317655 CDS YP_617026.1 103487465 4081026 2089932..2091629 1 NC_008048.1 gamma-glutamyltransferase 2091629 4081026 Sala_1982 Sphingopyxis alaskensis RB2256 gamma-glutamyltransferase YP_617026.1 2089932 D 317655 CDS YP_617027.1 103487466 4081027 2091798..2092232 1 NC_008048.1 type IV pilus assembly PilZ 2092232 4081027 Sala_1983 Sphingopyxis alaskensis RB2256 type IV pilus assembly PilZ YP_617027.1 2091798 D 317655 CDS YP_617028.1 103487467 4081028 complement(2092258..2093478) 1 NC_008048.1 polyhydroxyalkanoate depolymerase 2093478 4081028 Sala_1984 Sphingopyxis alaskensis RB2256 polyhydroxyalkanoate depolymerase YP_617028.1 2092258 R 317655 CDS YP_617029.1 103487468 4081029 2093653..2095446 1 NC_008048.1 ABC transporter 2095446 4081029 Sala_1985 Sphingopyxis alaskensis RB2256 ABC transporter YP_617029.1 2093653 D 317655 CDS YP_617030.1 103487469 4081030 2095486..2096022 1 NC_008048.1 hypothetical protein 2096022 4081030 Sala_1986 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617030.1 2095486 D 317655 CDS YP_617031.1 103487470 4082152 complement(2096030..2096455) 1 NC_008048.1 biopolymer transport protein ExbD/TolR 2096455 4082152 Sala_1987 Sphingopyxis alaskensis RB2256 biopolymer transport protein ExbD/TolR YP_617031.1 2096030 R 317655 CDS YP_617032.1 103487471 4082153 complement(2096682..2097803) 1 NC_008048.1 OmpA/MotB protein 2097803 4082153 Sala_1988 Sphingopyxis alaskensis RB2256 OmpA/MotB protein YP_617032.1 2096682 R 317655 CDS YP_617033.1 103487472 4082154 complement(2097934..2098386) 1 NC_008048.1 hypothetical protein 2098386 4082154 Sala_1989 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617033.1 2097934 R 317655 CDS YP_617034.1 103487473 4082155 complement(2098396..2100624) 1 NC_008048.1 hypothetical protein 2100624 4082155 Sala_1990 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617034.1 2098396 R 317655 CDS YP_617035.1 103487474 4082156 complement(2100978..2101811) 1 NC_008048.1 phage protein 2101811 4082156 Sala_1991 Sphingopyxis alaskensis RB2256 phage protein YP_617035.1 2100978 R 317655 CDS YP_617036.1 103487475 4082157 complement(2101805..2104129) 1 NC_008048.1 hypothetical protein 2104129 4082157 Sala_1992 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617036.1 2101805 R 317655 CDS YP_617037.1 103487476 4082158 complement(2104129..2104704) 1 NC_008048.1 hypothetical protein 2104704 4082158 Sala_1993 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617037.1 2104129 R 317655 CDS YP_617038.1 103487477 4082159 complement(2104902..2105228) 1 NC_008048.1 hypothetical protein 2105228 4082159 Sala_1994 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617038.1 2104902 R 317655 CDS YP_617039.1 103487478 4082160 complement(2105225..2105632) 1 NC_008048.1 Phage major tail protein, TP901-1 2105632 4082160 Sala_1995 Sphingopyxis alaskensis RB2256 Phage major tail protein, TP901-1 YP_617039.1 2105225 R 317655 CDS YP_617040.1 103487479 4082161 2105680..2106015 1 NC_008048.1 hypothetical protein 2106015 4082161 Sala_1996 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617040.1 2105680 D 317655 CDS YP_617041.1 103487480 4082162 2106104..2107048 1 NC_008048.1 hypothetical protein 2107048 4082162 Sala_1997 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617041.1 2106104 D 317655 CDS YP_617042.1 103487481 4082163 complement(2107424..2108917) 1 NC_008048.1 hypothetical protein 2108917 4082163 Sala_1998 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617042.1 2107424 R 317655 CDS YP_617043.1 103487482 4082164 complement(2109026..2110168) 1 NC_008048.1 phage major capsid protein, HK97 2110168 4082164 Sala_1999 Sphingopyxis alaskensis RB2256 phage major capsid protein, HK97 YP_617043.1 2109026 R 317655 CDS YP_617044.1 103487483 4082165 complement(2110339..2110788) 1 NC_008048.1 peptidase U35, phage prohead HK97 2110788 4082165 Sala_2000 Sphingopyxis alaskensis RB2256 peptidase U35, phage prohead HK97 YP_617044.1 2110339 R 317655 CDS YP_617045.1 103487484 4082166 complement(2110785..2111117) 1 NC_008048.1 hypothetical protein 2111117 4082166 Sala_2001 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617045.1 2110785 R 317655 CDS YP_617046.1 103487485 4082167 complement(2111214..2112320) 1 NC_008048.1 Phage portal protein, HK97 2112320 4082167 Sala_2002 Sphingopyxis alaskensis RB2256 Phage portal protein, HK97 YP_617046.1 2111214 R 317655 CDS YP_617047.1 103487486 4082168 complement(2112334..2112975) 1 NC_008048.1 hypothetical protein 2112975 4082168 Sala_2003 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617047.1 2112334 R 317655 CDS YP_617048.1 103487487 4082169 complement(2113125..2114435) 1 NC_008048.1 hypothetical protein 2114435 4082169 Sala_2004 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617048.1 2113125 R 317655 CDS YP_617049.1 103487488 4082170 complement(2114432..2114932) 1 NC_008048.1 hypothetical protein 2114932 4082170 Sala_2005 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617049.1 2114432 R 317655 CDS YP_617050.1 103487489 4079943 complement(2115059..2116153) 1 NC_008048.1 proline iminopeptidase 2116153 4079943 Sala_2006 Sphingopyxis alaskensis RB2256 proline iminopeptidase YP_617050.1 2115059 R 317655 CDS YP_617051.1 103487490 4079944 2116639..2118801 1 NC_008048.1 peptidase S9, prolyl oligopeptidase active site region 2118801 4079944 Sala_2007 Sphingopyxis alaskensis RB2256 peptidase S9, prolyl oligopeptidase active site region YP_617051.1 2116639 D 317655 CDS YP_617052.1 103487491 4079945 2118812..2119387 1 NC_008048.1 phosphoribosyltransferase 2119387 4079945 Sala_2008 Sphingopyxis alaskensis RB2256 phosphoribosyltransferase YP_617052.1 2118812 D 317655 CDS YP_617053.1 103487492 4079946 2119380..2120405 1 NC_008048.1 catalyzes the formation of inosine from adenosine; adenosine deaminase 2120405 4079946 Sala_2009 Sphingopyxis alaskensis RB2256 adenosine deaminase YP_617053.1 2119380 D 317655 CDS YP_617054.1 103487493 4079947 complement(2120494..2121534) 1 NC_008048.1 rod shape-determining protein MreB 2121534 4079947 Sala_2010 Sphingopyxis alaskensis RB2256 rod shape-determining protein MreB YP_617054.1 2120494 R 317655 CDS YP_617055.1 103487494 4079948 complement(2121705..2122280) 1 NC_008048.1 hypothetical protein 2122280 4079948 Sala_2011 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617055.1 2121705 R 317655 CDS YP_617056.1 103487495 4079949 complement(2122337..2123026) 1 NC_008048.1 hypothetical protein 2123026 4079949 Sala_2012 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617056.1 2122337 R 317655 CDS YP_617057.1 103487496 4079950 complement(2123181..2124179) 1 NC_008048.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 2124179 4079950 Sala_2013 Sphingopyxis alaskensis RB2256 tryptophanyl-tRNA synthetase YP_617057.1 2123181 R 317655 CDS YP_617058.1 103487497 4079951 complement(2124201..2125778) 1 NC_008048.1 integral membrane protein MviN 2125778 4079951 Sala_2014 Sphingopyxis alaskensis RB2256 integral membrane protein MviN YP_617058.1 2124201 R 317655 CDS YP_617059.1 103487498 4079952 complement(2125806..2126324) 1 NC_008048.1 protein-export protein SecB 2126324 4079952 Sala_2015 Sphingopyxis alaskensis RB2256 protein-export protein SecB YP_617059.1 2125806 R 317655 CDS YP_617060.1 103487499 4079953 2126574..2127239 1 NC_008048.1 import inner membrane translocase subunit Tim44 2127239 4079953 Sala_2016 Sphingopyxis alaskensis RB2256 import inner membrane translocase subunit Tim44 YP_617060.1 2126574 D 317655 CDS YP_617061.1 103487500 4079954 2127244..2128566 1 NC_008048.1 MltA protein 2128566 4079954 Sala_2017 Sphingopyxis alaskensis RB2256 MltA protein YP_617061.1 2127244 D 317655 CDS YP_617062.1 103487501 4079955 2128631..2129152 1 NC_008048.1 Smr protein/MutS2 2129152 4079955 Sala_2018 Sphingopyxis alaskensis RB2256 Smr protein/MutS2 YP_617062.1 2128631 D 317655 CDS YP_617063.1 103487502 4079956 complement(2129149..2130282) 1 NC_008048.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 2130282 4079956 Sala_2019 Sphingopyxis alaskensis RB2256 succinyl-diaminopimelate desuccinylase YP_617063.1 2129149 R 317655 CDS YP_617064.1 103487503 4079957 2130379..2130846 1 NC_008048.1 cupin 2130846 4079957 Sala_2020 Sphingopyxis alaskensis RB2256 cupin YP_617064.1 2130379 D 317655 CDS YP_617065.1 103487504 4079958 complement(2131015..2132301) 1 NC_008048.1 cytochrome P450 2132301 4079958 Sala_2021 Sphingopyxis alaskensis RB2256 cytochrome P450 YP_617065.1 2131015 R 317655 CDS YP_617066.1 103487505 4079959 complement(2132342..2134015) 1 NC_008048.1 hypothetical protein 2134015 4079959 Sala_2022 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617066.1 2132342 R 317655 CDS YP_617067.1 103487506 4079960 complement(2134080..2136194) 1 NC_008048.1 pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient; membrane-bound proton-translocating pyrophosphatase 2136194 hppA 4079960 hppA Sphingopyxis alaskensis RB2256 membrane-bound proton-translocating pyrophosphatase YP_617067.1 2134080 R 317655 CDS YP_617068.1 103487507 4079961 complement(2136430..2137383) 1 NC_008048.1 thiamine-monophosphate kinase 2137383 4079961 Sala_2024 Sphingopyxis alaskensis RB2256 thiamine-monophosphate kinase YP_617068.1 2136430 R 317655 CDS YP_617069.1 103487508 4079962 complement(2137543..2137992) 1 NC_008048.1 NusB antitermination factor 2137992 4079962 Sala_2025 Sphingopyxis alaskensis RB2256 NusB antitermination factor YP_617069.1 2137543 R 317655 CDS YP_617070.1 103487509 4079924 complement(2138000..2139292) 1 NC_008048.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 2139292 hisD 4079924 hisD Sphingopyxis alaskensis RB2256 histidinol dehydrogenase YP_617070.1 2138000 R 317655 CDS YP_617071.1 103487510 4079925 complement(2139279..2139950) 1 NC_008048.1 short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ; ATP phosphoribosyltransferase catalytic subunit 2139950 hisG 4079925 hisG Sphingopyxis alaskensis RB2256 ATP phosphoribosyltransferase catalytic subunit YP_617071.1 2139279 R 317655 CDS YP_617072.1 103487511 4079926 2139974..2141053 1 NC_008048.1 hypothetical protein 2141053 4079926 Sala_2028 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617072.1 2139974 D 317655 CDS YP_617073.1 103487512 4079927 complement(2141120..2141542) 1 NC_008048.1 hypothetical protein 2141542 4079927 Sala_2029 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617073.1 2141120 R 317655 CDS YP_617074.1 103487513 4079928 complement(2141597..2142745) 1 NC_008048.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 2142745 mnmA 4079928 mnmA Sphingopyxis alaskensis RB2256 tRNA-specific 2-thiouridylase MnmA YP_617074.1 2141597 R 317655 CDS YP_617075.1 103487514 4079929 complement(2142851..2143090) 1 NC_008048.1 hypothetical protein 2143090 4079929 Sala_2031 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617075.1 2142851 R 317655 CDS YP_617076.1 103487515 4079930 2143255..2143560 1 NC_008048.1 hypothetical protein 2143560 4079930 Sala_2032 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617076.1 2143255 D 317655 CDS YP_617077.1 103487516 4079931 2143745..2144020 1 NC_008048.1 hypothetical protein 2144020 4079931 Sala_2033 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617077.1 2143745 D 317655 CDS YP_617078.1 103487517 4079932 complement(2144064..2144444) 1 NC_008048.1 hypothetical protein 2144444 4079932 Sala_2034 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617078.1 2144064 R 317655 CDS YP_617079.1 103487518 4079933 complement(2144457..2145104) 1 NC_008048.1 hypothetical protein 2145104 4079933 Sala_2035 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617079.1 2144457 R 317655 CDS YP_617080.1 103487519 4079934 complement(2145174..2146997) 1 NC_008048.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 2146997 4079934 Sala_2036 Sphingopyxis alaskensis RB2256 GTP-binding protein LepA YP_617080.1 2145174 R 317655 CDS YP_617081.1 103487520 4079936 complement(2150698..2151111) 1 NC_008048.1 hypothetical protein 2151111 4079936 Sala_2039 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617081.1 2150698 R 317655 CDS YP_617082.1 103487521 4079937 complement(2151237..2151746) 1 NC_008048.1 hypothetical protein 2151746 4079937 Sala_2040 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617082.1 2151237 R 317655 CDS YP_617083.1 103487522 4079938 2151975..2152469 1 NC_008048.1 50S ribosomal protein L21 2152469 rplU 4079938 rplU Sphingopyxis alaskensis RB2256 50S ribosomal protein L21 YP_617083.1 2151975 D 317655 CDS YP_617084.1 103487523 4079939 2152519..2152788 1 NC_008048.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 2152788 rpmA 4079939 rpmA Sphingopyxis alaskensis RB2256 50S ribosomal protein L27 YP_617084.1 2152519 D 317655 CDS YP_617085.1 103487524 4079940 2153031..2153627 1 NC_008048.1 N-acetyltransferase GCN5 2153627 4079940 Sala_2043 Sphingopyxis alaskensis RB2256 N-acetyltransferase GCN5 YP_617085.1 2153031 D 317655 CDS YP_617086.1 103487525 4079941 2153741..2155585 1 NC_008048.1 twin-arginine translocation pathway signal 2155585 4079941 Sala_2044 Sphingopyxis alaskensis RB2256 twin-arginine translocation pathway signal YP_617086.1 2153741 D 317655 CDS YP_617087.1 103487526 4079942 complement(2155601..2156077) 1 NC_008048.1 hypothetical protein 2156077 4079942 Sala_2045 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617087.1 2155601 R 317655 CDS YP_617088.1 103487527 4080113 complement(2156127..2157812) 1 NC_008048.1 PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 2157812 4080113 Sala_2046 Sphingopyxis alaskensis RB2256 phosphoenolpyruvate carboxykinase YP_617088.1 2156127 R 317655 CDS YP_617089.1 103487528 4080114 2157974..2158684 1 NC_008048.1 two component transcriptional regulator 2158684 4080114 Sala_2047 Sphingopyxis alaskensis RB2256 two component transcriptional regulator YP_617089.1 2157974 D 317655 CDS YP_617090.1 103487529 4080115 2158776..2160281 1 NC_008048.1 sensor signal transduction histidine kinase 2160281 4080115 Sala_2048 Sphingopyxis alaskensis RB2256 sensor signal transduction histidine kinase YP_617090.1 2158776 D 317655 CDS YP_617091.1 103487530 4080116 2160334..2160780 1 NC_008048.1 HPr kinase 2160780 4080116 Sala_2049 Sphingopyxis alaskensis RB2256 HPr kinase YP_617091.1 2160334 D 317655 CDS YP_617092.1 103487531 4080117 2160777..2161727 1 NC_008048.1 hypothetical protein 2161727 4080117 Sala_2050 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617092.1 2160777 D 317655 CDS YP_617093.1 103487532 4080118 2161742..2162170 1 NC_008048.1 PTS system fructose subfamily transporter subunit IIA 2162170 4080118 Sala_2051 Sphingopyxis alaskensis RB2256 PTS system fructose subfamily transporter subunit IIA YP_617093.1 2161742 D 317655 CDS YP_617094.1 103487533 4080119 2162167..2162445 1 NC_008048.1 hypothetical protein 2162445 4080119 Sala_2052 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617094.1 2162167 D 317655 CDS YP_617095.1 103487534 4080120 2162452..2163264 1 NC_008048.1 tRNA/rRNA methyltransferase SpoU 2163264 4080120 Sala_2053 Sphingopyxis alaskensis RB2256 tRNA/rRNA methyltransferase SpoU YP_617095.1 2162452 D 317655 CDS YP_617096.1 103487535 4080121 2163426..2164130 1 NC_008048.1 hypothetical protein 2164130 4080121 Sala_2054 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617096.1 2163426 D 317655 CDS YP_617097.1 103487536 4080122 complement(2164284..2165639) 1 NC_008048.1 hypothetical protein 2165639 4080122 Sala_2055 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617097.1 2164284 R 317655 CDS YP_617098.1 103487537 4080123 complement(2165865..2166341) 1 NC_008048.1 hypothetical protein 2166341 4080123 Sala_2056 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617098.1 2165865 R 317655 CDS YP_617099.1 103487538 4080124 complement(2166468..2167001) 1 NC_008048.1 hypothetical protein 2167001 4080124 Sala_2057 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617099.1 2166468 R 317655 CDS YP_617100.1 103487539 4080125 2167155..2169059 1 NC_008048.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 2169059 dnaK 4080125 dnaK Sphingopyxis alaskensis RB2256 molecular chaperone DnaK YP_617100.1 2167155 D 317655 CDS YP_617101.1 103487540 4080126 2169178..2170308 1 NC_008048.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ 2170308 4080126 Sala_2059 Sphingopyxis alaskensis RB2256 chaperone protein DnaJ YP_617101.1 2169178 D 317655 CDS YP_617102.1 103487541 4080127 complement(2170504..2171373) 1 NC_008048.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor SigJ 2171373 4080127 Sala_2060 Sphingopyxis alaskensis RB2256 RNA polymerase sigma factor SigJ YP_617102.1 2170504 R 317655 CDS YP_617103.1 103487542 4080128 complement(2171373..2171828) 1 NC_008048.1 alkylhydroperoxidase AhpD core 2171828 4080128 Sala_2061 Sphingopyxis alaskensis RB2256 alkylhydroperoxidase AhpD core YP_617103.1 2171373 R 317655 CDS YP_617104.1 103487543 4080129 2171966..2172343 1 NC_008048.1 DoxX protein 2172343 4080129 Sala_2062 Sphingopyxis alaskensis RB2256 DoxX protein YP_617104.1 2171966 D 317655 CDS YP_617105.1 103487544 4080130 complement(2172838..2173845) 1 NC_008048.1 PhoH-like protein 2173845 4080130 Sala_2063 Sphingopyxis alaskensis RB2256 PhoH-like protein YP_617105.1 2172838 R 317655 CDS YP_617106.1 103487545 4080131 complement(2173981..2175315) 1 NC_008048.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 2175315 4080131 Sala_2064 Sphingopyxis alaskensis RB2256 (dimethylallyl)adenosine tRNA methylthiotransferase YP_617106.1 2173981 R 317655 CDS YP_617107.1 103487546 4080132 complement(2175323..2176108) 1 NC_008048.1 phospholipid/glycerol acyltransferase 2176108 4080132 Sala_2065 Sphingopyxis alaskensis RB2256 phospholipid/glycerol acyltransferase YP_617107.1 2175323 R 317655 CDS YP_617108.1 103487547 4080002 complement(2176080..2176505) 1 NC_008048.1 ferric uptake regulator family protein 2176505 4080002 Sala_2066 Sphingopyxis alaskensis RB2256 ferric uptake regulator family protein YP_617108.1 2176080 R 317655 CDS YP_617109.1 103487548 4080003 complement(2176641..2177075) 1 NC_008048.1 MucR family transcriptional regulator 2177075 4080003 Sala_2067 Sphingopyxis alaskensis RB2256 MucR family transcriptional regulator YP_617109.1 2176641 R 317655 CDS YP_617110.1 103487549 4080004 complement(2177198..2177626) 1 NC_008048.1 N-acetyltransferase GCN5 2177626 4080004 Sala_2068 Sphingopyxis alaskensis RB2256 N-acetyltransferase GCN5 YP_617110.1 2177198 R 317655 CDS YP_617111.1 103487550 4080005 complement(2177677..2178303) 1 NC_008048.1 peptidase M22, glycoprotease 2178303 4080005 Sala_2069 Sphingopyxis alaskensis RB2256 peptidase M22, glycoprotease YP_617111.1 2177677 R 317655 CDS YP_617112.1 103487551 4080006 complement(2178296..2178889) 1 NC_008048.1 hypothetical protein 2178889 4080006 Sala_2070 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617112.1 2178296 R 317655 CDS YP_617113.1 103487552 4080007 complement(2178915..2179487) 1 NC_008048.1 nitrogen-fixing NifU-like protein 2179487 4080007 Sala_2071 Sphingopyxis alaskensis RB2256 nitrogen-fixing NifU-like protein YP_617113.1 2178915 R 317655 CDS YP_617114.1 103487553 4080008 2179551..2180423 1 NC_008048.1 hypothetical protein 2180423 4080008 Sala_2072 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617114.1 2179551 D 317655 CDS YP_617115.1 103487554 4080010 2180741..2181220 1 NC_008048.1 heat shock protein Hsp20 2181220 4080010 Sala_2073 Sphingopyxis alaskensis RB2256 heat shock protein Hsp20 YP_617115.1 2180741 D 317655 CDS YP_617116.1 103487555 4080011 2181312..2181833 1 NC_008048.1 heat shock protein Hsp20 2181833 4080011 Sala_2074 Sphingopyxis alaskensis RB2256 heat shock protein Hsp20 YP_617116.1 2181312 D 317655 CDS YP_617117.1 103487556 4080012 2181862..2182350 1 NC_008048.1 hypothetical protein 2182350 4080012 Sala_2075 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617117.1 2181862 D 317655 CDS YP_617118.1 103487557 4080013 complement(2182334..2182603) 1 NC_008048.1 Usg-like protein 2182603 4080013 Sala_2076 Sphingopyxis alaskensis RB2256 Usg-like protein YP_617118.1 2182334 R 317655 CDS YP_617119.1 103487558 4080014 complement(2182600..2182836) 1 NC_008048.1 hypothetical protein 2182836 4080014 Sala_2077 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617119.1 2182600 R 317655 CDS YP_617120.1 103487559 4080015 2183094..2183408 1 NC_008048.1 chaperonin Cpn10 2183408 4080015 Sala_2078 Sphingopyxis alaskensis RB2256 chaperonin Cpn10 YP_617120.1 2183094 D 317655 CDS YP_617121.1 103487560 4080016 2183461..2185080 1 NC_008048.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL 2185080 groEL 4080016 groEL Sphingopyxis alaskensis RB2256 chaperonin GroEL YP_617121.1 2183461 D 317655 CDS YP_617122.1 103487561 4080017 complement(2185256..2185882) 1 NC_008048.1 fumarylacetoacetate (FAA) hydrolase 2185882 4080017 Sala_2080 Sphingopyxis alaskensis RB2256 fumarylacetoacetate (FAA) hydrolase YP_617122.1 2185256 R 317655 CDS YP_617123.1 103487562 4080018 complement(2186256..2186903) 1 NC_008048.1 DSBA oxidoreductase 2186903 4080018 Sala_2081 Sphingopyxis alaskensis RB2256 DSBA oxidoreductase YP_617123.1 2186256 R 317655 CDS YP_617124.1 103487563 4080019 2187476..2188591 1 NC_008048.1 secretion protein HlyD 2188591 4080019 Sala_2082 Sphingopyxis alaskensis RB2256 secretion protein HlyD YP_617124.1 2187476 D 317655 CDS YP_617125.1 103487564 4080057 2188781..2190370 1 NC_008048.1 EmrB/QacA family drug resistance transporter 2190370 4080057 Sala_2083 Sphingopyxis alaskensis RB2256 EmrB/QacA family drug resistance transporter YP_617125.1 2188781 D 317655 CDS YP_617126.1 103487565 4080058 complement(2190457..2191347) 1 NC_008048.1 FF domain-containing protein 2191347 4080058 Sala_2084 Sphingopyxis alaskensis RB2256 FF domain-containing protein YP_617126.1 2190457 R 317655 CDS YP_617127.1 103487566 4080059 2191406..2192014 1 NC_008048.1 TetR family transcriptional regulator 2192014 4080059 Sala_2085 Sphingopyxis alaskensis RB2256 TetR family transcriptional regulator YP_617127.1 2191406 D 317655 CDS YP_617128.1 103487567 4080060 2192298..2192606 1 NC_008048.1 hypothetical protein 2192606 4080060 Sala_2086 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617128.1 2192298 D 317655 CDS YP_617129.1 103487568 4080061 2192584..2192916 1 NC_008048.1 XRE family transcriptional regulator 2192916 4080061 Sala_2087 Sphingopyxis alaskensis RB2256 XRE family transcriptional regulator YP_617129.1 2192584 D 317655 CDS YP_617130.1 103487569 4080062 complement(2193000..2193650) 1 NC_008048.1 glutathione S-transferase-like protein 2193650 4080062 Sala_2088 Sphingopyxis alaskensis RB2256 glutathione S-transferase-like protein YP_617130.1 2193000 R 317655 CDS YP_617131.1 103487570 4080063 2193821..2195500 1 NC_008048.1 signal transduction histidine kinase 2195500 4080063 Sala_2089 Sphingopyxis alaskensis RB2256 signal transduction histidine kinase YP_617131.1 2193821 D 317655 CDS YP_617132.1 103487571 4080064 2195553..2196569 1 NC_008048.1 LacI family transcriptional regulator 2196569 4080064 Sala_2090 Sphingopyxis alaskensis RB2256 LacI family transcriptional regulator YP_617132.1 2195553 D 317655 CDS YP_617133.1 103487572 4080065 2196655..2198862 1 NC_008048.1 TonB-dependent siderophore receptor 2198862 4080065 Sala_2091 Sphingopyxis alaskensis RB2256 TonB-dependent siderophore receptor YP_617133.1 2196655 D 317655 CDS YP_617134.1 103487573 4080066 complement(2198941..2199729) 1 NC_008048.1 hypothetical protein 2199729 4080066 Sala_2092 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617134.1 2198941 R 317655 CDS YP_617135.1 103487574 4080067 2199964..2200236 1 NC_008048.1 CopG/Arc/MetJ family transcriptional regulator 2200236 4080067 Sala_2093 Sphingopyxis alaskensis RB2256 CopG/Arc/MetJ family transcriptional regulator YP_617135.1 2199964 D 317655 CDS YP_617136.1 103487575 4080068 complement(2200586..2201761) 1 NC_008048.1 hypothetical protein 2201761 4080068 Sala_2094 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617136.1 2200586 R 317655 CDS YP_617137.1 103487576 4080069 complement(2201761..2202498) 1 NC_008048.1 phage Gp37Gp68 2202498 4080069 Sala_2095 Sphingopyxis alaskensis RB2256 phage Gp37Gp68 YP_617137.1 2201761 R 317655 CDS YP_617138.1 103487577 4080070 2202830..2205505 1 NC_008048.1 aconitate hydratase 1 2205505 4080070 Sala_2096 Sphingopyxis alaskensis RB2256 aconitate hydratase 1 YP_617138.1 2202830 D 317655 CDS YP_617139.1 103487578 4080071 2205578..2205844 1 NC_008048.1 hypothetical protein 2205844 4080071 Sala_2097 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617139.1 2205578 D 317655 CDS YP_617140.1 103487579 4080073 complement(2206004..2206975) 1 NC_008048.1 magnesium and cobalt transport protein CorA 2206975 4080073 Sala_2098 Sphingopyxis alaskensis RB2256 magnesium and cobalt transport protein CorA YP_617140.1 2206004 R 317655 CDS YP_617141.1 103487580 4080074 complement(2207073..2208107) 1 NC_008048.1 hypothetical protein 2208107 4080074 Sala_2099 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617141.1 2207073 R 317655 CDS YP_617142.1 103487581 4080075 2208341..2208919 1 NC_008048.1 nuclease 2208919 4080075 Sala_2100 Sphingopyxis alaskensis RB2256 nuclease YP_617142.1 2208341 D 317655 CDS YP_617143.1 103487582 4080076 2208965..2209345 1 NC_008048.1 crcB protein 2209345 4080076 Sala_2101 Sphingopyxis alaskensis RB2256 crcB protein YP_617143.1 2208965 D 317655 CDS YP_617144.1 103487583 4080077 2209342..2210559 1 NC_008048.1 pseudouridine synthase RluD 2210559 4080077 Sala_2102 Sphingopyxis alaskensis RB2256 pseudouridine synthase RluD YP_617144.1 2209342 D 317655 CDS YP_617145.1 103487584 4080078 2210591..2210827 1 NC_008048.1 hypothetical protein 2210827 4080078 Sala_2103 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617145.1 2210591 D 317655 CDS YP_617146.1 103487585 4080079 2210824..2211513 1 NC_008048.1 ATP12 ATPase 2211513 4080079 Sala_2104 Sphingopyxis alaskensis RB2256 ATP12 ATPase YP_617146.1 2210824 D 317655 CDS YP_617147.1 103487586 4080080 2211590..2212690 1 NC_008048.1 transposase, IS4 2212690 4080080 Sala_2105 Sphingopyxis alaskensis RB2256 transposase, IS4 YP_617147.1 2211590 D 317655 CDS YP_617148.1 103487587 4080081 complement(2212828..2213289) 1 NC_008048.1 hypothetical protein 2213289 4080081 Sala_2106 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617148.1 2212828 R 317655 CDS YP_617149.1 103487588 4080082 2213344..2214315 1 NC_008048.1 type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II 2214315 glpX 4080082 glpX Sphingopyxis alaskensis RB2256 fructose 1,6-bisphosphatase II YP_617149.1 2213344 D 317655 CDS YP_617150.1 103487589 4080083 2214367..2216700 1 NC_008048.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 2216700 4080083 Sala_2108 Sphingopyxis alaskensis RB2256 DNA topoisomerase IV subunit A YP_617150.1 2214367 D 317655 CDS YP_617151.1 103487590 4080084 2216760..2218472 1 NC_008048.1 diguanylate cyclase/phosphodiesterase 2218472 4080084 Sala_2109 Sphingopyxis alaskensis RB2256 diguanylate cyclase/phosphodiesterase YP_617151.1 2216760 D 317655 CDS YP_617152.1 103487591 4080085 complement(2218445..2219641) 1 NC_008048.1 polynucleotide adenylyltransferase 2219641 4080085 Sala_2110 Sphingopyxis alaskensis RB2256 polynucleotide adenylyltransferase YP_617152.1 2218445 R 317655 CDS YP_617153.1 103487592 4080086 complement(2219638..2220222) 1 NC_008048.1 NUDIX hydrolase 2220222 4080086 Sala_2111 Sphingopyxis alaskensis RB2256 NUDIX hydrolase YP_617153.1 2219638 R 317655 CDS YP_617154.1 103487593 4080087 complement(2220222..2220806) 1 NC_008048.1 hypothetical protein 2220806 4080087 Sala_2112 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617154.1 2220222 R 317655 CDS YP_617155.1 103487594 4080088 complement(2220862..2221365) 1 NC_008048.1 N-acetyltransferase GCN5 2221365 4080088 Sala_2113 Sphingopyxis alaskensis RB2256 N-acetyltransferase GCN5 YP_617155.1 2220862 R 317655 CDS YP_617156.1 103487595 4080089 2221402..2221827 1 NC_008048.1 hypothetical protein 2221827 4080089 Sala_2114 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617156.1 2221402 D 317655 CDS YP_617157.1 103487596 4080090 2221824..2222585 1 NC_008048.1 short-chain dehydrogenase/reductase SDR 2222585 4080090 Sala_2115 Sphingopyxis alaskensis RB2256 short-chain dehydrogenase/reductase SDR YP_617157.1 2221824 D 317655 CDS YP_617158.1 103487597 4080091 complement(2222777..2224210) 1 NC_008048.1 succinate-semialdehyde dehydrogenase (NAD(P)+) 2224210 4080091 Sala_2116 Sphingopyxis alaskensis RB2256 succinate-semialdehyde dehydrogenase (NAD(P)+) YP_617158.1 2222777 R 317655 CDS YP_617159.1 103487598 4080092 complement(2224365..2224964) 1 NC_008048.1 hypothetical protein 2224964 4080092 Sala_2117 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617159.1 2224365 R 317655 CDS YP_617160.1 103487599 4080093 2225011..2225931 1 NC_008048.1 putative gluconolactonase precursor 2225931 4080093 Sala_2118 Sphingopyxis alaskensis RB2256 putative gluconolactonase precursor YP_617160.1 2225011 D 317655 CDS YP_617161.1 103487600 4080094 2225942..2226631 1 NC_008048.1 hypothetical protein 2226631 4080094 Sala_2119 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617161.1 2225942 D 317655 CDS YP_617162.1 103487601 4080095 2226719..2227825 1 NC_008048.1 hypothetical protein 2227825 4080095 Sala_2120 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617162.1 2226719 D 317655 CDS YP_617163.1 103487602 4080096 2227822..2228469 1 NC_008048.1 epoxide hydrolase domain-containing phosphatase 2228469 4080096 Sala_2121 Sphingopyxis alaskensis RB2256 epoxide hydrolase domain-containing phosphatase YP_617163.1 2227822 D 317655 CDS YP_617164.1 103487603 4080097 complement(2228568..2229461) 1 NC_008048.1 LysR family transcriptional regulator 2229461 4080097 Sala_2122 Sphingopyxis alaskensis RB2256 LysR family transcriptional regulator YP_617164.1 2228568 R 317655 CDS YP_617165.1 103487604 4080098 2229553..2230263 1 NC_008048.1 3-oxoacid CoA-transferase subunit A 2230263 4080098 Sala_2123 Sphingopyxis alaskensis RB2256 3-oxoacid CoA-transferase subunit A YP_617165.1 2229553 D 317655 CDS YP_617166.1 103487605 4080099 2230263..2230898 1 NC_008048.1 3-oxoacid CoA-transferase subunit B 2230898 4080099 Sala_2124 Sphingopyxis alaskensis RB2256 3-oxoacid CoA-transferase subunit B YP_617166.1 2230263 D 317655 CDS YP_617167.1 103487606 4080100 2230902..2231351 1 NC_008048.1 hypothetical protein 2231351 4080100 Sala_2125 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617167.1 2230902 D 317655 CDS YP_617168.1 103487607 4080101 2231398..2232375 1 NC_008048.1 NAD-dependent epimerase/dehydratase 2232375 4080101 Sala_2126 Sphingopyxis alaskensis RB2256 NAD-dependent epimerase/dehydratase YP_617168.1 2231398 D 317655 CDS YP_617169.1 103487608 4080102 2232363..2233043 1 NC_008048.1 glutathione S-transferase-like protein 2233043 4080102 Sala_2127 Sphingopyxis alaskensis RB2256 glutathione S-transferase-like protein YP_617169.1 2232363 D 317655 CDS YP_617170.1 103487609 4080103 complement(2233157..2233759) 1 NC_008048.1 carotene hydroxylase 2233759 4080103 Sala_2128 Sphingopyxis alaskensis RB2256 carotene hydroxylase YP_617170.1 2233157 R 317655 CDS YP_617171.1 103487610 4080104 2233902..2235332 1 NC_008048.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 2235332 4080104 Sala_2129 Sphingopyxis alaskensis RB2256 isopropylmalate isomerase large subunit YP_617171.1 2233902 D 317655 CDS YP_617172.1 103487611 4080105 2235358..2236206 1 NC_008048.1 beta-lactamase-like protein 2236206 4080105 Sala_2130 Sphingopyxis alaskensis RB2256 beta-lactamase-like protein YP_617172.1 2235358 D 317655 CDS YP_617173.1 103487612 4080106 2236208..2236801 1 NC_008048.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit 2236801 leuD 4080106 leuD Sphingopyxis alaskensis RB2256 isopropylmalate isomerase small subunit YP_617173.1 2236208 D 317655 CDS YP_617174.1 103487613 4080107 2236825..2237820 1 NC_008048.1 zinc-binding alcohol dehydrogenase 2237820 4080107 Sala_2132 Sphingopyxis alaskensis RB2256 zinc-binding alcohol dehydrogenase YP_617174.1 2236825 D 317655 CDS YP_617175.1 103487614 4080108 2237892..2238095 1 NC_008048.1 hypothetical protein 2238095 4080108 Sala_2133 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617175.1 2237892 D 317655 CDS YP_617176.1 103487615 4080109 2238170..2238463 1 NC_008048.1 hypothetical protein 2238463 4080109 Sala_2134 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617176.1 2238170 D 317655 CDS YP_617177.1 103487616 4080111 complement(2238783..2239109) 1 NC_008048.1 hypothetical protein 2239109 4080111 Sala_2135 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617177.1 2238783 R 317655 CDS YP_617178.1 103487617 4080133 2239561..2240499 1 NC_008048.1 3-beta hydroxysteroid dehydrogenase/isomerase 2240499 4080133 Sala_2136 Sphingopyxis alaskensis RB2256 3-beta hydroxysteroid dehydrogenase/isomerase YP_617178.1 2239561 D 317655 CDS YP_617179.1 103487618 4080134 2240558..2241358 1 NC_008048.1 BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase 2241358 4080134 Sala_2137 Sphingopyxis alaskensis RB2256 undecaprenyl pyrophosphate phosphatase YP_617179.1 2240558 D 317655 CDS YP_617180.1 103487619 4080135 2241517..2242959 1 NC_008048.1 function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain; putative oxidoreductase 2242959 4080135 Sala_2138 Sphingopyxis alaskensis RB2256 putative oxidoreductase YP_617180.1 2241517 D 317655 CDS YP_617181.1 103487620 4080136 2242980..2244113 1 NC_008048.1 hypothetical protein 2244113 4080136 Sala_2139 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617181.1 2242980 D 317655 CDS YP_617182.1 103487621 4080137 2244141..2248673 1 NC_008048.1 glutamate synthase 2248673 4080137 Sala_2140 Sphingopyxis alaskensis RB2256 glutamate synthase YP_617182.1 2244141 D 317655 CDS YP_617183.1 103487622 4080138 2248787..2249215 1 NC_008048.1 hypothetical protein 2249215 4080138 Sala_2141 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617183.1 2248787 D 317655 CDS YP_617184.1 103487623 4080139 2249385..2250056 1 NC_008048.1 glutathione S-transferase-like protein 2250056 4080139 Sala_2142 Sphingopyxis alaskensis RB2256 glutathione S-transferase-like protein YP_617184.1 2249385 D 317655 CDS YP_617185.1 103487624 4080140 complement(2250165..2250983) 1 NC_008048.1 Involved in ubiquinone biosynthesis; 3-demethylubiquinone-9 3-methyltransferase 2250983 4080140 Sala_2143 Sphingopyxis alaskensis RB2256 3-demethylubiquinone-9 3-methyltransferase YP_617185.1 2250165 R 317655 CDS YP_617186.1 103487625 4080141 2251144..2252391 1 NC_008048.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase 2252391 4080141 Sala_2144 Sphingopyxis alaskensis RB2256 aspartate kinase YP_617186.1 2251144 D 317655 CDS YP_617187.1 103487626 4080142 complement(2252474..2253040) 1 NC_008048.1 hypothetical protein 2253040 4080142 Sala_2145 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617187.1 2252474 R 317655 CDS YP_617188.1 103487627 4080143 complement(2253691..2255886) 1 NC_008048.1 catalase/peroxidase HPI 2255886 4080143 Sala_2146 Sphingopyxis alaskensis RB2256 catalase/peroxidase HPI YP_617188.1 2253691 R 317655 CDS YP_617189.1 103487628 4080144 2256213..2257217 1 NC_008048.1 2-nitropropane dioxygenase 2257217 4080144 Sala_2147 Sphingopyxis alaskensis RB2256 2-nitropropane dioxygenase YP_617189.1 2256213 D 317655 CDS YP_617190.1 103487629 4080145 2257250..2257993 1 NC_008048.1 hypothetical protein 2257993 4080145 Sala_2148 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617190.1 2257250 D 317655 CDS YP_617191.1 103487630 4080146 2258079..2260376 1 NC_008048.1 phosphoenolpyruvate-protein phosphotransferase PtsP 2260376 4080146 Sala_2149 Sphingopyxis alaskensis RB2256 phosphoenolpyruvate-protein phosphotransferase PtsP YP_617191.1 2258079 D 317655 CDS YP_617192.1 103487631 4080147 complement(2260412..2261452) 1 NC_008048.1 hypothetical protein 2261452 4080147 Sala_2150 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617192.1 2260412 R 317655 CDS YP_617193.1 103487632 4080148 complement(2261505..2263064) 1 NC_008048.1 hypothetical protein 2263064 4080148 Sala_2151 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617193.1 2261505 R 317655 CDS YP_617194.1 103487633 4080149 complement(2263068..2264453) 1 NC_008048.1 NoeA host specific nodulation protein 2264453 4080149 Sala_2152 Sphingopyxis alaskensis RB2256 NoeA host specific nodulation protein YP_617194.1 2263068 R 317655 CDS YP_617195.1 103487634 4080150 complement(2264459..2264668) 1 NC_008048.1 hypothetical protein 2264668 4080150 Sala_2153 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617195.1 2264459 R 317655 CDS YP_617196.1 103487635 4080151 2264845..2265261 1 NC_008048.1 glutathione-dependent formaldehyde-activating protein 2265261 4080151 Sala_2154 Sphingopyxis alaskensis RB2256 glutathione-dependent formaldehyde-activating protein YP_617196.1 2264845 D 317655 CDS YP_617197.1 103487636 4080189 complement(2265243..2266622) 1 NC_008048.1 beta-lactamase 2266622 4080189 Sala_2155 Sphingopyxis alaskensis RB2256 beta-lactamase YP_617197.1 2265243 R 317655 CDS YP_617198.1 103487637 4080190 complement(2266655..2267974) 1 NC_008048.1 recombination factor protein RarA 2267974 4080190 Sala_2156 Sphingopyxis alaskensis RB2256 recombination factor protein RarA YP_617198.1 2266655 R 317655 CDS YP_617199.1 103487638 4080191 complement(2267982..2269139) 1 NC_008048.1 group 1 glycosyl transferase 2269139 4080191 Sala_2157 Sphingopyxis alaskensis RB2256 group 1 glycosyl transferase YP_617199.1 2267982 R 317655 CDS YP_617200.1 103487639 4080192 complement(2269181..2270125) 1 NC_008048.1 hypothetical protein 2270125 4080192 Sala_2158 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617200.1 2269181 R 317655 CDS YP_617201.1 103487640 4080193 complement(2270145..2270651) 1 NC_008048.1 hypothetical protein 2270651 4080193 Sala_2159 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617201.1 2270145 R 317655 CDS YP_617202.1 103487641 4080194 2271219..2272421 1 NC_008048.1 mechanosensitive ion channel protein MscS 2272421 4080194 Sala_2160 Sphingopyxis alaskensis RB2256 mechanosensitive ion channel protein MscS YP_617202.1 2271219 D 317655 CDS YP_617203.1 103487642 4080195 2272515..2272973 1 NC_008048.1 MaoC-like dehydratase 2272973 4080195 Sala_2161 Sphingopyxis alaskensis RB2256 MaoC-like dehydratase YP_617203.1 2272515 D 317655 CDS YP_617204.1 103487643 4080196 2273025..2274206 1 NC_008048.1 Acetyl-CoA C-acyltransferase 2274206 4080196 Sala_2162 Sphingopyxis alaskensis RB2256 Acetyl-CoA C-acyltransferase YP_617204.1 2273025 D 317655 CDS YP_617205.1 103487644 4080197 2274208..2274792 1 NC_008048.1 carboxymuconolactone decarboxylase 2274792 4080197 Sala_2163 Sphingopyxis alaskensis RB2256 carboxymuconolactone decarboxylase YP_617205.1 2274208 D 317655 CDS YP_617206.1 103487645 4080198 2274810..2275100 1 NC_008048.1 antibiotic biosynthesis monooxygenase 2275100 4080198 Sala_2164 Sphingopyxis alaskensis RB2256 antibiotic biosynthesis monooxygenase YP_617206.1 2274810 D 317655 CDS YP_617207.1 103487646 4080199 complement(2275594..2276064) 1 NC_008048.1 MerR family transcriptional regulator 2276064 4080199 Sala_2165 Sphingopyxis alaskensis RB2256 MerR family transcriptional regulator YP_617207.1 2275594 R 317655 CDS YP_617208.1 103487647 4080200 2276262..2276657 1 NC_008048.1 glyoxalase/bleomycin resistance protein/dioxygenase 2276657 4080200 Sala_2166 Sphingopyxis alaskensis RB2256 glyoxalase/bleomycin resistance protein/dioxygenase YP_617208.1 2276262 D 317655 CDS YP_617209.1 103487648 4080201 2276723..2277187 1 NC_008048.1 general stress protein 2277187 4080201 Sala_2167 Sphingopyxis alaskensis RB2256 general stress protein YP_617209.1 2276723 D 317655 CDS YP_617210.1 103487649 4080202 2277263..2278363 1 NC_008048.1 transposase, IS4 2278363 4080202 Sala_2168 Sphingopyxis alaskensis RB2256 transposase, IS4 YP_617210.1 2277263 D 317655 CDS YP_617211.1 103487650 4080203 complement(2278882..2279442) 1 NC_008048.1 hypothetical protein 2279442 4080203 Sala_2169 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617211.1 2278882 R 317655 CDS YP_617212.1 103487651 4080204 2279593..2279829 1 NC_008048.1 hypothetical protein 2279829 4080204 Sala_2170 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617212.1 2279593 D 317655 CDS YP_617213.1 103487652 4080205 2279939..2281141 1 NC_008048.1 glycine C-acetyltransferase 2281141 4080205 Sala_2171 Sphingopyxis alaskensis RB2256 glycine C-acetyltransferase YP_617213.1 2279939 D 317655 CDS YP_617214.1 103487653 4080206 2281255..2283231 1 NC_008048.1 periplasmic sensor hybrid histidine kinase 2283231 4080206 Sala_2172 Sphingopyxis alaskensis RB2256 periplasmic sensor hybrid histidine kinase YP_617214.1 2281255 D 317655 CDS YP_617215.1 103487654 4080207 complement(2283383..2284246) 1 NC_008048.1 hypothetical protein 2284246 4080207 Sala_2173 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617215.1 2283383 R 317655 CDS YP_617216.1 103487655 4080208 complement(2284387..2285361) 1 NC_008048.1 diacylglycerol kinase catalytic subunit 2285361 4080208 Sala_2174 Sphingopyxis alaskensis RB2256 diacylglycerol kinase catalytic subunit YP_617216.1 2284387 R 317655 CDS YP_617217.1 103487656 4080209 complement(2285367..2285840) 1 NC_008048.1 hypothetical protein 2285840 4080209 Sala_2175 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617217.1 2285367 R 317655 CDS YP_617218.1 103487657 4080210 2285973..2287181 1 NC_008048.1 permease YjgP/YjgQ 2287181 4080210 Sala_2176 Sphingopyxis alaskensis RB2256 permease YjgP/YjgQ YP_617218.1 2285973 D 317655 CDS YP_617219.1 103487658 4080211 2287181..2288281 1 NC_008048.1 permease YjgP/YjgQ 2288281 4080211 Sala_2177 Sphingopyxis alaskensis RB2256 permease YjgP/YjgQ YP_617219.1 2287181 D 317655 CDS YP_617220.1 103487659 4080212 complement(2288319..2289425) 1 NC_008048.1 fatty acid desaturase 2289425 4080212 Sala_2178 Sphingopyxis alaskensis RB2256 fatty acid desaturase YP_617220.1 2288319 R 317655 CDS YP_617221.1 103487660 4080213 2289542..2290708 1 NC_008048.1 hypothetical protein 2290708 4080213 Sala_2179 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617221.1 2289542 D 317655 CDS YP_617222.1 103487661 4080214 complement(2290718..2291488) 1 NC_008048.1 exodeoxyribonuclease III (xth) 2291488 4080214 Sala_2180 Sphingopyxis alaskensis RB2256 exodeoxyribonuclease III (xth) YP_617222.1 2290718 R 317655 CDS YP_617223.1 103487662 4080215 complement(2291622..2291990) 1 NC_008048.1 HesB/YadR/YfhF 2291990 4080215 Sala_2181 Sphingopyxis alaskensis RB2256 HesB/YadR/YfhF YP_617223.1 2291622 R 317655 CDS YP_617224.1 103487663 4080216 complement(2292062..2292763) 1 NC_008048.1 peptidase M23B 2292763 4080216 Sala_2182 Sphingopyxis alaskensis RB2256 peptidase M23B YP_617224.1 2292062 R 317655 CDS YP_617225.1 103487664 4080217 complement(2292879..2293670) 1 NC_008048.1 hypothetical protein 2293670 4080217 Sala_2183 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617225.1 2292879 R 317655 CDS YP_617226.1 103487665 4080218 complement(2293670..2294131) 1 NC_008048.1 alkyl hydroperoxide reductase 2294131 4080218 Sala_2184 Sphingopyxis alaskensis RB2256 alkyl hydroperoxide reductase YP_617226.1 2293670 R 317655 CDS YP_617227.1 103487666 4080219 complement(2294128..2296845) 1 NC_008048.1 glutamate-ammonia-ligase adenylyltransferase 2296845 4080219 Sala_2185 Sphingopyxis alaskensis RB2256 glutamate-ammonia-ligase adenylyltransferase YP_617227.1 2294128 R 317655 CDS YP_617228.1 103487667 4080220 complement(2296991..2297785) 1 NC_008048.1 in Caulobacter crescentus, CC3477 is differentially expressed in minimal salts media with glucose as compared to complex media; two-component response regulator 2297785 4080220 Sala_2186 Sphingopyxis alaskensis RB2256 two-component response regulator YP_617228.1 2296991 R 317655 CDS YP_617229.1 103487668 4080221 complement(2298168..2299295) 1 NC_008048.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 2299295 tgt 4080221 tgt Sphingopyxis alaskensis RB2256 queuine tRNA-ribosyltransferase YP_617229.1 2298168 R 317655 CDS YP_617230.1 103487669 4080222 complement(2299482..2299970) 1 NC_008048.1 hemerythrin HHE cation binding protein 2299970 4080222 Sala_2188 Sphingopyxis alaskensis RB2256 hemerythrin HHE cation binding protein YP_617230.1 2299482 R 317655 CDS YP_617231.1 103487670 4080223 complement(2300034..2302223) 1 NC_008048.1 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 2302223 4080223 Sala_2189 Sphingopyxis alaskensis RB2256 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_617231.1 2300034 R 317655 CDS YP_617232.1 103487671 4080224 2302710..2303378 1 NC_008048.1 XRE family transcriptional regulator 2303378 4080224 Sala_2190 Sphingopyxis alaskensis RB2256 XRE family transcriptional regulator YP_617232.1 2302710 D 317655 CDS YP_617233.1 103487672 4080225 complement(2303438..2304493) 1 NC_008048.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 2304493 queA 4080225 queA Sphingopyxis alaskensis RB2256 S-adenosylmethionine--tRNA ribosyltransferase-isomerase YP_617233.1 2303438 R 317655 CDS YP_617234.1 103487673 4080226 complement(2304518..2305234) 1 NC_008048.1 peptidyl-prolyl isomerase 2305234 4080226 Sala_2192 Sphingopyxis alaskensis RB2256 peptidyl-prolyl isomerase YP_617234.1 2304518 R 317655 CDS YP_617235.1 103487674 4080227 complement(2305319..2305825) 1 NC_008048.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 2305825 coaD 4080227 coaD Sphingopyxis alaskensis RB2256 phosphopantetheine adenylyltransferase YP_617235.1 2305319 R 317655 CDS YP_617236.1 103487675 4080152 complement(2305825..2306745) 1 NC_008048.1 polyprenyl synthetase 2306745 4080152 Sala_2194 Sphingopyxis alaskensis RB2256 polyprenyl synthetase YP_617236.1 2305825 R 317655 CDS YP_617237.1 103487676 4080153 complement(2306752..2307015) 1 NC_008048.1 exodeoxyribonuclease VII small subunit 2307015 4080153 Sala_2195 Sphingopyxis alaskensis RB2256 exodeoxyribonuclease VII small subunit YP_617237.1 2306752 R 317655 CDS YP_617238.1 103487677 4080154 2307398..2308000 1 NC_008048.1 hypothetical protein 2308000 4080154 Sala_2196 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617238.1 2307398 D 317655 CDS YP_617239.1 103487678 4080155 2308085..2310328 1 NC_008048.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase II 2310328 4080155 Sala_2197 Sphingopyxis alaskensis RB2256 phosphoribosylformylglycinamidine synthase II YP_617239.1 2308085 D 317655 CDS YP_617240.1 103487679 4080156 2310443..2311189 1 NC_008048.1 hypothetical protein 2311189 4080156 Sala_2198 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617240.1 2310443 D 317655 CDS YP_617241.1 103487680 4080157 complement(2311194..2312012) 1 NC_008048.1 hypothetical protein 2312012 4080157 Sala_2199 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617241.1 2311194 R 317655 CDS YP_617242.1 103487681 4080158 2312125..2312799 1 NC_008048.1 nitroreductase 2312799 4080158 Sala_2200 Sphingopyxis alaskensis RB2256 nitroreductase YP_617242.1 2312125 D 317655 CDS YP_617243.1 103487682 4080159 2312828..2314078 1 NC_008048.1 hypothetical protein 2314078 4080159 Sala_2201 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617243.1 2312828 D 317655 CDS YP_617244.1 103487683 4080160 complement(2314092..2314496) 1 NC_008048.1 hypothetical protein 2314496 4080160 Sala_2202 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617244.1 2314092 R 317655 CDS YP_617245.1 103487684 4080161 complement(2314827..2316197) 1 NC_008048.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 2316197 engA 4080161 engA Sphingopyxis alaskensis RB2256 GTP-binding protein EngA YP_617245.1 2314827 R 317655 CDS YP_617246.1 103487685 4080162 complement(2316236..2317570) 1 NC_008048.1 Pyrrolo-quinoline quinone 2317570 4080162 Sala_2204 Sphingopyxis alaskensis RB2256 Pyrrolo-quinoline quinone YP_617246.1 2316236 R 317655 CDS YP_617247.1 103487686 4080163 complement(2317572..2318333) 1 NC_008048.1 hypothetical protein 2318333 4080163 Sala_2205 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617247.1 2317572 R 317655 CDS YP_617248.1 103487687 4080164 complement(2318435..2319298) 1 NC_008048.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 2319298 panB 4080164 panB Sphingopyxis alaskensis RB2256 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_617248.1 2318435 R 317655 CDS YP_617249.1 103487688 4080165 2319426..2319848 1 NC_008048.1 hypothetical protein 2319848 4080165 Sala_2207 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617249.1 2319426 D 317655 CDS YP_617250.1 103487689 4080166 2319973..2320194 1 NC_008048.1 XRE family transcriptional regulator 2320194 4080166 Sala_2208 Sphingopyxis alaskensis RB2256 XRE family transcriptional regulator YP_617250.1 2319973 D 317655 CDS YP_617251.1 103487690 4080167 complement(2320325..2321392) 1 NC_008048.1 glycerophosphoryl diester phosphodiesterase 2321392 4080167 Sala_2209 Sphingopyxis alaskensis RB2256 glycerophosphoryl diester phosphodiesterase YP_617251.1 2320325 R 317655 CDS YP_617252.1 103487691 4080168 complement(2321389..2321739) 1 NC_008048.1 hypothetical protein 2321739 4080168 Sala_2210 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617252.1 2321389 R 317655 CDS YP_617253.1 103487692 4080169 complement(2321779..2322477) 1 NC_008048.1 cyclic nucleotide-binding protein 2322477 4080169 Sala_2211 Sphingopyxis alaskensis RB2256 cyclic nucleotide-binding protein YP_617253.1 2321779 R 317655 CDS YP_617254.1 103487693 4080170 2322722..2324095 1 NC_008048.1 phospho-2-dehydro-3-deoxyheptonate aldolase 2324095 4080170 Sala_2212 Sphingopyxis alaskensis RB2256 phospho-2-dehydro-3-deoxyheptonate aldolase YP_617254.1 2322722 D 317655 CDS YP_617255.1 103487694 4080171 complement(2324212..2325732) 1 NC_008048.1 peptidase M28 2325732 4080171 Sala_2213 Sphingopyxis alaskensis RB2256 peptidase M28 YP_617255.1 2324212 R 317655 CDS YP_617256.1 103487695 4080285 complement(2325907..2326710) 1 NC_008048.1 HpcH/HpaI aldolase 2326710 4080285 Sala_2214 Sphingopyxis alaskensis RB2256 HpcH/HpaI aldolase YP_617256.1 2325907 R 317655 CDS YP_617257.1 103487696 4080286 2326796..2327710 1 NC_008048.1 hypothetical protein 2327710 4080286 Sala_2215 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617257.1 2326796 D 317655 CDS YP_617258.1 103487697 4080287 2327712..2328158 1 NC_008048.1 hypothetical protein 2328158 4080287 Sala_2216 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617258.1 2327712 D 317655 CDS YP_617259.1 103487698 4080288 complement(2328228..2328794) 1 NC_008048.1 N-acetyltransferase GCN5 2328794 4080288 Sala_2217 Sphingopyxis alaskensis RB2256 N-acetyltransferase GCN5 YP_617259.1 2328228 R 317655 CDS YP_617260.1 103487699 4080289 complement(2328791..2329363) 1 NC_008048.1 hypothetical protein 2329363 4080289 Sala_2218 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617260.1 2328791 R 317655 CDS YP_617261.1 103487700 4080290 2329466..2330572 1 NC_008048.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 2330572 4080290 Sala_2219 Sphingopyxis alaskensis RB2256 gamma-glutamyl kinase YP_617261.1 2329466 D 317655 CDS YP_617262.1 103487701 4080291 2330709..2331629 1 NC_008048.1 Male sterility-like protein 2331629 4080291 Sala_2220 Sphingopyxis alaskensis RB2256 Male sterility-like protein YP_617262.1 2330709 D 317655 CDS YP_617263.1 103487702 4080292 2331783..2333768 1 NC_008048.1 signal peptide peptidase SppA, 67K type 2333768 4080292 Sala_2221 Sphingopyxis alaskensis RB2256 signal peptide peptidase SppA, 67K type YP_617263.1 2331783 D 317655 CDS YP_617264.1 103487703 4080293 complement(2333868..2334773) 1 NC_008048.1 alpha/beta hydrolase 2334773 4080293 Sala_2222 Sphingopyxis alaskensis RB2256 alpha/beta hydrolase YP_617264.1 2333868 R 317655 CDS YP_617265.1 103487704 4080294 complement(2335130..2335753) 1 NC_008048.1 hypothetical protein 2335753 4080294 Sala_2223 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617265.1 2335130 R 317655 CDS YP_617266.1 103487705 4080295 2335816..2336277 1 NC_008048.1 glutathione-dependent formaldehyde-activating protein 2336277 4080295 Sala_2224 Sphingopyxis alaskensis RB2256 glutathione-dependent formaldehyde-activating protein YP_617266.1 2335816 D 317655 CDS YP_617267.1 103487706 4080296 complement(2336317..2337714) 1 NC_008048.1 dihydrolipoamide dehydrogenase 2337714 4080296 Sala_2225 Sphingopyxis alaskensis RB2256 dihydrolipoamide dehydrogenase YP_617267.1 2336317 R 317655 CDS YP_617268.1 103487707 4080297 complement(2337759..2338118) 1 NC_008048.1 excinuclease ABC subunit C 2338118 4080297 Sala_2226 Sphingopyxis alaskensis RB2256 excinuclease ABC subunit C YP_617268.1 2337759 R 317655 CDS YP_617269.1 103487708 4080298 complement(2338186..2339400) 1 NC_008048.1 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase 2339400 4080298 Sala_2227 Sphingopyxis alaskensis RB2256 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase YP_617269.1 2338186 R 317655 CDS YP_617270.1 103487709 4080299 complement(2339422..2342244) 1 NC_008048.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component 2342244 sucA 4080299 sucA Sphingopyxis alaskensis RB2256 2-oxoglutarate dehydrogenase E1 component YP_617270.1 2339422 R 317655 CDS YP_617271.1 103487710 4080300 complement(2342333..2343223) 1 NC_008048.1 succinyl-CoA synthetase subunit alpha 2343223 4080300 Sala_2229 Sphingopyxis alaskensis RB2256 succinyl-CoA synthetase subunit alpha YP_617271.1 2342333 R 317655 CDS YP_617272.1 103487711 4080301 complement(2343349..2344311) 1 NC_008048.1 Catalyzes the reversible oxidation of malate to oxaloacetate; malate dehydrogenase 2344311 4080301 Sala_2230 Sphingopyxis alaskensis RB2256 malate dehydrogenase YP_617272.1 2343349 R 317655 CDS YP_617273.1 103487712 4080302 2344542..2345639 1 NC_008048.1 hypothetical protein 2345639 4080302 Sala_2231 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617273.1 2344542 D 317655 CDS YP_617274.1 103487713 4080303 complement(2345592..2346731) 1 NC_008048.1 AFG1-like ATPase 2346731 4080303 Sala_2232 Sphingopyxis alaskensis RB2256 AFG1-like ATPase YP_617274.1 2345592 R 317655 CDS YP_617275.1 103487714 4080247 complement(2346728..2347093) 1 NC_008048.1 thioesterase superfamily protein 2347093 4080247 Sala_2233 Sphingopyxis alaskensis RB2256 thioesterase superfamily protein YP_617275.1 2346728 R 317655 CDS YP_617276.1 103487715 4080248 complement(2347216..2347998) 1 NC_008048.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit 2347998 sdhB 4080248 sdhB Sphingopyxis alaskensis RB2256 succinate dehydrogenase iron-sulfur subunit YP_617276.1 2347216 R 317655 CDS YP_617277.1 103487716 4080249 2348065..2349672 1 NC_008048.1 hypothetical protein 2349672 4080249 Sala_2235 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617277.1 2348065 D 317655 CDS YP_617278.1 103487717 4080250 2349669..2350379 1 NC_008048.1 HAD family hydrolase 2350379 4080250 Sala_2236 Sphingopyxis alaskensis RB2256 HAD family hydrolase YP_617278.1 2349669 D 317655 CDS YP_617279.1 103487718 4080251 2350379..2351518 1 NC_008048.1 hypothetical protein 2351518 4080251 Sala_2237 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617279.1 2350379 D 317655 CDS YP_617280.1 103487719 4080252 2351515..2352618 1 NC_008048.1 hypothetical protein 2352618 4080252 Sala_2238 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617280.1 2351515 D 317655 CDS YP_617281.1 103487720 4080253 2352615..2353043 1 NC_008048.1 histidine triad (HIT) protein 2353043 4080253 Sala_2239 Sphingopyxis alaskensis RB2256 histidine triad (HIT) protein YP_617281.1 2352615 D 317655 CDS YP_617282.1 103487721 4080254 complement(2353031..2353795) 1 NC_008048.1 nucleotidyl transferase 2353795 4080254 Sala_2240 Sphingopyxis alaskensis RB2256 nucleotidyl transferase YP_617282.1 2353031 R 317655 CDS YP_617283.1 103487722 4080255 complement(2353792..2354586) 1 NC_008048.1 hypothetical protein 2354586 4080255 Sala_2241 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617283.1 2353792 R 317655 CDS YP_617284.1 103487723 4080256 complement(2354583..2355584) 1 NC_008048.1 Alpha/beta hydrolase fold-3 2355584 4080256 Sala_2242 Sphingopyxis alaskensis RB2256 Alpha/beta hydrolase fold-3 YP_617284.1 2354583 R 317655 CDS YP_617285.1 103487724 4080257 2355631..2356461 1 NC_008048.1 similar to enzymes related to diacylglycerol kinase; sphingosine kinase 2356461 4080257 Sala_2243 Sphingopyxis alaskensis RB2256 sphingosine kinase YP_617285.1 2355631 D 317655 CDS YP_617286.1 103487725 4080258 2356458..2357306 1 NC_008048.1 metallophosphoesterase 2357306 4080258 Sala_2244 Sphingopyxis alaskensis RB2256 metallophosphoesterase YP_617286.1 2356458 D 317655 CDS YP_617287.1 103487726 4080259 2357356..2358447 1 NC_008048.1 hypothetical protein 2358447 4080259 Sala_2245 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617287.1 2357356 D 317655 CDS YP_617288.1 103487727 4080260 2358444..2359484 1 NC_008048.1 hypothetical protein 2359484 4080260 Sala_2246 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617288.1 2358444 D 317655 CDS YP_617289.1 103487728 4080261 complement(2359665..2361158) 1 NC_008048.1 peptidase S1C, Do 2361158 4080261 Sala_2247 Sphingopyxis alaskensis RB2256 peptidase S1C, Do YP_617289.1 2359665 R 317655 CDS YP_617290.1 103487729 4080262 complement(2361286..2362137) 1 NC_008048.1 hypothetical protein 2362137 4080262 Sala_2248 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617290.1 2361286 R 317655 CDS YP_617291.1 103487730 4080263 complement(2362137..2363297) 1 NC_008048.1 HflK protein 2363297 4080263 Sala_2249 Sphingopyxis alaskensis RB2256 HflK protein YP_617291.1 2362137 R 317655 CDS YP_617292.1 103487731 4080264 2363348..2364367 1 NC_008048.1 chromosome partitioning ATPase 2364367 4080264 Sala_2250 Sphingopyxis alaskensis RB2256 chromosome partitioning ATPase YP_617292.1 2363348 D 317655 CDS YP_617293.1 103487732 4080265 2364367..2364789 1 NC_008048.1 CoA-binding protein 2364789 4080265 Sala_2251 Sphingopyxis alaskensis RB2256 CoA-binding protein YP_617293.1 2364367 D 317655 CDS YP_617294.1 103487733 4080266 2364873..2367161 1 NC_008048.1 twin-arginine translocation pathway signal 2367161 4080266 Sala_2252 Sphingopyxis alaskensis RB2256 twin-arginine translocation pathway signal YP_617294.1 2364873 D 317655 CDS YP_617295.1 103487734 4080556 2367158..2368153 1 NC_008048.1 ferrochelatase 2368153 4080556 Sala_2253 Sphingopyxis alaskensis RB2256 ferrochelatase YP_617295.1 2367158 D 317655 CDS YP_617296.1 103487735 4080557 2368246..2369745 1 NC_008048.1 hypothetical protein 2369745 4080557 Sala_2254 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617296.1 2368246 D 317655 CDS YP_617297.1 103487736 4080558 2369834..2370556 1 NC_008048.1 acetoacetyl-CoA reductase 2370556 4080558 Sala_2255 Sphingopyxis alaskensis RB2256 acetoacetyl-CoA reductase YP_617297.1 2369834 D 317655 CDS YP_617298.1 103487737 4080559 2370719..2370967 1 NC_008048.1 hypothetical protein 2370967 4080559 Sala_2256 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617298.1 2370719 D 317655 CDS YP_617299.1 103487738 4080560 complement(2370952..2371809) 1 NC_008048.1 hypothetical protein 2371809 4080560 Sala_2257 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617299.1 2370952 R 317655 CDS YP_617300.1 103487739 4080561 complement(2371949..2376667) 1 NC_008048.1 NAD-glutamate dehydrogenase 2376667 4080561 Sala_2258 Sphingopyxis alaskensis RB2256 NAD-glutamate dehydrogenase YP_617300.1 2371949 R 317655 CDS YP_617301.1 103487740 4080562 complement(2376832..2378184) 1 NC_008048.1 hypothetical protein 2378184 4080562 Sala_2259 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617301.1 2376832 R 317655 CDS YP_617302.1 103487741 4080563 complement(2378504..2379148) 1 NC_008048.1 TetR family transcriptional regulator 2379148 4080563 Sala_2260 Sphingopyxis alaskensis RB2256 TetR family transcriptional regulator YP_617302.1 2378504 R 317655 CDS YP_617303.1 103487742 4080565 2379675..2380337 1 NC_008048.1 protein-L-isoaspartate(D-aspartate) O-methyltransferase 2380337 4080565 Sala_2261 Sphingopyxis alaskensis RB2256 protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_617303.1 2379675 D 317655 CDS YP_617304.1 103487743 4080566 2380376..2381869 1 NC_008048.1 Type I secretion outer membrane protein, TolC 2381869 4080566 Sala_2262 Sphingopyxis alaskensis RB2256 Type I secretion outer membrane protein, TolC YP_617304.1 2380376 D 317655 CDS YP_617305.1 103487744 4080567 2381973..2382398 1 NC_008048.1 hypothetical protein 2382398 4080567 Sala_2263 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617305.1 2381973 D 317655 CDS YP_617306.1 103487745 4080568 complement(2382600..2383469) 1 NC_008048.1 NUDIX hydrolase 2383469 4080568 Sala_2264 Sphingopyxis alaskensis RB2256 NUDIX hydrolase YP_617306.1 2382600 R 317655 CDS YP_617307.1 103487746 4080569 complement(2383469..2384755) 1 NC_008048.1 twin-arginine translocation pathway signal 2384755 4080569 Sala_2265 Sphingopyxis alaskensis RB2256 twin-arginine translocation pathway signal YP_617307.1 2383469 R 317655 CDS YP_617308.1 103487747 4080570 complement(2384752..2385753) 1 NC_008048.1 HhH-GPD 2385753 4080570 Sala_2266 Sphingopyxis alaskensis RB2256 HhH-GPD YP_617308.1 2384752 R 317655 CDS YP_617309.1 103487748 4080571 2385926..2386522 1 NC_008048.1 hypothetical protein 2386522 4080571 Sala_2267 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617309.1 2385926 D 317655 CDS YP_617310.1 103487749 4080572 2386533..2387246 1 NC_008048.1 protein-disulfide isomerase 2387246 4080572 Sala_2268 Sphingopyxis alaskensis RB2256 protein-disulfide isomerase YP_617310.1 2386533 D 317655 CDS YP_617311.1 103487750 4080573 2387282..2388019 1 NC_008048.1 protein-disulfide isomerase 2388019 4080573 Sala_2269 Sphingopyxis alaskensis RB2256 protein-disulfide isomerase YP_617311.1 2387282 D 317655 CDS YP_617312.1 103487751 4080727 2388159..2391602 1 NC_008048.1 chromosome segregation protein SMC 2391602 4080727 Sala_2270 Sphingopyxis alaskensis RB2256 chromosome segregation protein SMC YP_617312.1 2388159 D 317655 CDS YP_617313.1 103487752 4080728 complement(2391765..2392673) 1 NC_008048.1 UbiA prenyltransferase family catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin; 4-hydroxybenzoate polyprenyltransferase 2392673 ubiA 4080728 ubiA Sphingopyxis alaskensis RB2256 4-hydroxybenzoate polyprenyltransferase YP_617313.1 2391765 R 317655 CDS YP_617314.1 103487753 4080729 complement(2392720..2393379) 1 NC_008048.1 hypothetical protein 2393379 4080729 Sala_2272 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617314.1 2392720 R 317655 CDS YP_617315.1 103487754 4080730 complement(2393376..2393957) 1 NC_008048.1 TadE-like protein 2393957 4080730 Sala_2273 Sphingopyxis alaskensis RB2256 TadE-like protein YP_617315.1 2393376 R 317655 CDS YP_617316.1 103487755 4080731 complement(2393954..2395954) 1 NC_008048.1 hypothetical protein 2395954 4080731 Sala_2274 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617316.1 2393954 R 317655 CDS YP_617317.1 103487756 4080732 2396158..2396907 1 NC_008048.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 2396907 4080732 Sala_2275 Sphingopyxis alaskensis RB2256 16S ribosomal RNA methyltransferase RsmE YP_617317.1 2396158 D 317655 CDS YP_617318.1 103487757 4080733 2397051..2398985 1 NC_008048.1 proprotein convertase, P 2398985 4080733 Sala_2276 Sphingopyxis alaskensis RB2256 proprotein convertase, P YP_617318.1 2397051 D 317655 CDS YP_617319.1 103487758 4080734 2399025..2400407 1 NC_008048.1 glutamate--cysteine ligase 2400407 4080734 Sala_2277 Sphingopyxis alaskensis RB2256 glutamate--cysteine ligase YP_617319.1 2399025 D 317655 CDS YP_617320.1 103487759 4080735 2400422..2400625 1 NC_008048.1 hypothetical protein 2400625 4080735 Sala_2278 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617320.1 2400422 D 317655 CDS YP_617321.1 103487760 4080736 2400773..2402941 1 NC_008048.1 binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA 2402941 4080736 Sala_2279 Sphingopyxis alaskensis RB2256 primosome assembly protein PriA YP_617321.1 2400773 D 317655 CDS YP_617322.1 103487761 4080737 2403015..2404559 1 NC_008048.1 hypothetical protein 2404559 4080737 Sala_2280 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617322.1 2403015 D 317655 CDS YP_617323.1 103487762 4080738 complement(2404553..2405314) 1 NC_008048.1 hypothetical protein 2405314 4080738 Sala_2281 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617323.1 2404553 R 317655 CDS YP_617324.1 103487763 4080739 complement(2405311..2406348) 1 NC_008048.1 AraC family transcriptional regulator 2406348 4080739 Sala_2282 Sphingopyxis alaskensis RB2256 AraC family transcriptional regulator YP_617324.1 2405311 R 317655 CDS YP_617325.1 103487764 4080740 complement(2406345..2406818) 1 NC_008048.1 hypothetical protein 2406818 4080740 Sala_2283 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617325.1 2406345 R 317655 CDS YP_617326.1 103487765 4080741 2406916..2408460 1 NC_008048.1 peptidase S1 and S6, chymotrypsin/Hap 2408460 4080741 Sala_2284 Sphingopyxis alaskensis RB2256 peptidase S1 and S6, chymotrypsin/Hap YP_617326.1 2406916 D 317655 CDS YP_617327.1 103487766 4080742 complement(2408501..2409193) 1 NC_008048.1 carboxymethylenebutenolidase 2409193 4080742 Sala_2285 Sphingopyxis alaskensis RB2256 carboxymethylenebutenolidase YP_617327.1 2408501 R 317655 CDS YP_617328.1 103487767 4080743 2410077..2411606 1 NC_008048.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 2411606 4080743 Sala_2286 Sphingopyxis alaskensis RB2256 F0F1 ATP synthase subunit alpha YP_617328.1 2410077 D 317655 CDS YP_617329.1 103487768 4080744 2411692..2412567 1 NC_008048.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 2412567 4080744 Sala_2287 Sphingopyxis alaskensis RB2256 F0F1 ATP synthase subunit gamma YP_617329.1 2411692 D 317655 CDS YP_617330.1 103487769 4080745 2412592..2414133 1 NC_008048.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 2414133 4080745 Sala_2288 Sphingopyxis alaskensis RB2256 F0F1 ATP synthase subunit beta YP_617330.1 2412592 D 317655 CDS YP_617331.1 103487770 4080746 2414171..2414437 1 NC_008048.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the epsilon subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit epsilon 2414437 atpC 4080746 atpC Sphingopyxis alaskensis RB2256 F0F1 ATP synthase subunit epsilon YP_617331.1 2414171 D 317655 CDS YP_617332.1 103487771 4080786 2414708..2416204 1 NC_008048.1 type II secretion system protein E 2416204 4080786 Sala_2290 Sphingopyxis alaskensis RB2256 type II secretion system protein E YP_617332.1 2414708 D 317655 CDS YP_617333.1 103487772 4080787 2416407..2417405 1 NC_008048.1 type 11 methyltransferase 2417405 4080787 Sala_2291 Sphingopyxis alaskensis RB2256 type 11 methyltransferase YP_617333.1 2416407 D 317655 CDS YP_617334.1 103487773 4080788 2417468..2418181 1 NC_008048.1 leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase 2418181 aat 4080788 aat Sphingopyxis alaskensis RB2256 leucyl/phenylalanyl-tRNA--protein transferase YP_617334.1 2417468 D 317655 CDS YP_617335.1 103487774 4080789 complement(2418603..2418989) 1 NC_008048.1 Provides the input to the respiratory chain from the NAD-linked dehydrogenases of the citric acid cycle. The complex couples the oxidation of NADH and the reduction of ubiquinone, to the generation of a proton gradient which is then used for ATP synthesis; NADH dehydrogenase 2418989 4080789 Sala_2293 Sphingopyxis alaskensis RB2256 NADH dehydrogenase YP_617335.1 2418603 R 317655 CDS YP_617336.1 103487775 4080790 complement(2419052..2419507) 1 NC_008048.1 hypothetical protein 2419507 4080790 Sala_2294 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617336.1 2419052 R 317655 CDS YP_617337.1 103487776 4080791 2419560..2422079 1 NC_008048.1 AMP-dependent synthetase and ligase 2422079 4080791 Sala_2295 Sphingopyxis alaskensis RB2256 AMP-dependent synthetase and ligase YP_617337.1 2419560 D 317655 CDS YP_617338.1 103487777 4080792 2422439..2424793 1 NC_008048.1 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 2424793 4080792 Sala_2296 Sphingopyxis alaskensis RB2256 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_617338.1 2422439 D 317655 CDS YP_617339.1 103487778 4080793 2424998..2425582 1 NC_008048.1 hypothetical protein 2425582 4080793 Sala_2297 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617339.1 2424998 D 317655 CDS YP_617340.1 103487779 4080794 complement(2425689..2425958) 1 NC_008048.1 hypothetical protein 2425958 4080794 Sala_2298 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617340.1 2425689 R 317655 CDS YP_617341.1 103487780 4080795 2426043..2427269 1 NC_008048.1 hypothetical protein 2427269 4080795 Sala_2299 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617341.1 2426043 D 317655 CDS YP_617342.1 103487781 4080796 2427469..2428332 1 NC_008048.1 DNA methylase N-4/N-6 2428332 4080796 Sala_2300 Sphingopyxis alaskensis RB2256 DNA methylase N-4/N-6 YP_617342.1 2427469 D 317655 CDS YP_617343.1 103487782 4080797 2428332..2428943 1 NC_008048.1 hypothetical protein 2428943 4080797 Sala_2301 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617343.1 2428332 D 317655 CDS YP_617344.1 103487783 4080798 complement(2429035..2429592) 1 NC_008048.1 pseudouridine synthase, Rsu 2429592 4080798 Sala_2302 Sphingopyxis alaskensis RB2256 pseudouridine synthase, Rsu YP_617344.1 2429035 R 317655 CDS YP_617345.1 103487784 4080799 complement(2429807..2431639) 1 NC_008048.1 GTP-binding protein TypA 2431639 4080799 Sala_2303 Sphingopyxis alaskensis RB2256 GTP-binding protein TypA YP_617345.1 2429807 R 317655 CDS YP_617346.1 103487785 4080800 complement(2431694..2432623) 1 NC_008048.1 hypothetical protein 2432623 4080800 Sala_2304 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617346.1 2431694 R 317655 CDS YP_617347.1 103487786 4080801 complement(2432623..2433546) 1 NC_008048.1 hypothetical protein 2433546 4080801 Sala_2305 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617347.1 2432623 R 317655 CDS YP_617348.1 103487787 4080802 complement(2433611..2434423) 1 NC_008048.1 purine phosphorylase family protein 1 2434423 4080802 Sala_2306 Sphingopyxis alaskensis RB2256 purine phosphorylase family protein 1 YP_617348.1 2433611 R 317655 CDS YP_617349.1 103487788 4080803 2434600..2435703 1 NC_008048.1 putative cytochrome oxidase 2435703 4080803 Sala_2307 Sphingopyxis alaskensis RB2256 putative cytochrome oxidase YP_617349.1 2434600 D 317655 CDS YP_617350.1 103487789 4080804 2435781..2436992 1 NC_008048.1 toxic anion resistance 2436992 4080804 Sala_2308 Sphingopyxis alaskensis RB2256 toxic anion resistance YP_617350.1 2435781 D 317655 CDS YP_617351.1 103487790 4080593 2437003..2437737 1 NC_008048.1 hypothetical protein 2437737 4080593 Sala_2309 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617351.1 2437003 D 317655 CDS YP_617352.1 103487791 4080595 2438001..2439305 1 NC_008048.1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2439305 4080595 Sala_2310 Sphingopyxis alaskensis RB2256 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_617352.1 2438001 D 317655 CDS YP_617353.1 103487792 4080596 2439302..2439709 1 NC_008048.1 hypothetical protein 2439709 4080596 Sala_2311 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617353.1 2439302 D 317655 CDS YP_617354.1 103487793 4080597 complement(2439711..2440970) 1 NC_008048.1 membrane dipeptidase 2440970 4080597 Sala_2312 Sphingopyxis alaskensis RB2256 membrane dipeptidase YP_617354.1 2439711 R 317655 CDS YP_617355.1 103487794 4080598 2441066..2442241 1 NC_008048.1 acyl-CoA dehydrogenase-like protein 2442241 4080598 Sala_2313 Sphingopyxis alaskensis RB2256 acyl-CoA dehydrogenase-like protein YP_617355.1 2441066 D 317655 CDS YP_617356.1 103487795 4080599 2442298..2443506 1 NC_008048.1 peptidase M20D, amidohydrolase 2443506 4080599 Sala_2314 Sphingopyxis alaskensis RB2256 peptidase M20D, amidohydrolase YP_617356.1 2442298 D 317655 CDS YP_617357.1 103487796 4080600 complement(2443609..2445195) 1 NC_008048.1 L-aspartate oxidase 2445195 4080600 Sala_2315 Sphingopyxis alaskensis RB2256 L-aspartate oxidase YP_617357.1 2443609 R 317655 CDS YP_617358.1 103487797 4080601 complement(2445295..2446218) 1 NC_008048.1 ABC transporter 2446218 4080601 Sala_2316 Sphingopyxis alaskensis RB2256 ABC transporter YP_617358.1 2445295 R 317655 CDS YP_617359.1 103487798 4080602 2446321..2446881 1 NC_008048.1 hypothetical protein 2446881 4080602 Sala_2317 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617359.1 2446321 D 317655 CDS YP_617360.1 103487799 4080603 2446944..2447213 1 NC_008048.1 hypothetical protein 2447213 4080603 Sala_2318 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617360.1 2446944 D 317655 CDS YP_617361.1 103487800 4080604 2447265..2448707 1 NC_008048.1 C69 family peptidase 2448707 4080604 Sala_2319 Sphingopyxis alaskensis RB2256 C69 family peptidase YP_617361.1 2447265 D 317655 CDS YP_617362.1 103487801 4080605 2448925..2450160 1 NC_008048.1 hypothetical protein 2450160 4080605 Sala_2320 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617362.1 2448925 D 317655 CDS YP_617363.1 103487802 4080606 2450240..2450638 1 NC_008048.1 hypothetical protein 2450638 4080606 Sala_2321 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617363.1 2450240 D 317655 CDS YP_617364.1 103487803 4080607 2450759..2451346 1 NC_008048.1 hypothetical protein 2451346 4080607 Sala_2322 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617364.1 2450759 D 317655 CDS YP_617365.1 103487804 4080608 2451375..2451941 1 NC_008048.1 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 2451941 4080608 Sala_2323 Sphingopyxis alaskensis RB2256 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_617365.1 2451375 D 317655 CDS YP_617366.1 103487805 4080609 2451941..2452153 1 NC_008048.1 hypothetical protein 2452153 4080609 Sala_2324 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617366.1 2451941 D 317655 CDS YP_617367.1 103487806 4080610 2452223..2452918 1 NC_008048.1 endonuclease/exonuclease/phosphatase 2452918 4080610 Sala_2325 Sphingopyxis alaskensis RB2256 endonuclease/exonuclease/phosphatase YP_617367.1 2452223 D 317655 CDS YP_617368.1 103487807 4080611 2453252..2453590 1 NC_008048.1 nitrogen regulatory protein P-II 2453590 4080611 Sala_2326 Sphingopyxis alaskensis RB2256 nitrogen regulatory protein P-II YP_617368.1 2453252 D 317655 CDS YP_617369.1 103487808 4080574 2453609..2455078 1 NC_008048.1 ammonium transporter 2455078 4080574 Sala_2327 Sphingopyxis alaskensis RB2256 ammonium transporter YP_617369.1 2453609 D 317655 CDS YP_617370.1 103487809 4080575 2455375..2457735 1 NC_008048.1 TonB-dependent receptor 2457735 4080575 Sala_2328 Sphingopyxis alaskensis RB2256 TonB-dependent receptor YP_617370.1 2455375 D 317655 CDS YP_617371.1 103487810 4080576 complement(2458216..2458590) 1 NC_008048.1 glyoxalase/bleomycin resistance protein/dioxygenase 2458590 4080576 Sala_2329 Sphingopyxis alaskensis RB2256 glyoxalase/bleomycin resistance protein/dioxygenase YP_617371.1 2458216 R 317655 CDS YP_617372.1 103487811 4080577 2458653..2459192 1 NC_008048.1 HxlR family transcriptional regulator 2459192 4080577 Sala_2330 Sphingopyxis alaskensis RB2256 HxlR family transcriptional regulator YP_617372.1 2458653 D 317655 CDS YP_617373.1 103487812 4080578 complement(2459232..2460818) 1 NC_008048.1 glucose-methanol-choline oxidoreductase 2460818 4080578 Sala_2331 Sphingopyxis alaskensis RB2256 glucose-methanol-choline oxidoreductase YP_617373.1 2459232 R 317655 CDS YP_617374.1 103487813 4080579 complement(2460996..2461910) 1 NC_008048.1 hypothetical protein 2461910 4080579 Sala_2332 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617374.1 2460996 R 317655 CDS YP_617375.1 103487814 4080580 complement(2461903..2462307) 1 NC_008048.1 hypothetical protein 2462307 4080580 Sala_2333 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617375.1 2461903 R 317655 CDS YP_617376.1 103487815 4080581 complement(2462304..2462738) 1 NC_008048.1 hypothetical protein 2462738 4080581 Sala_2334 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617376.1 2462304 R 317655 CDS YP_617377.1 103487816 4080582 complement(2463004..2464785) 1 NC_008048.1 ATP-dependent DNA helicase RecQ 2464785 4080582 Sala_2335 Sphingopyxis alaskensis RB2256 ATP-dependent DNA helicase RecQ YP_617377.1 2463004 R 317655 CDS YP_617378.1 103487817 4080583 complement(2464825..2465484) 1 NC_008048.1 major intrinsic protein 2465484 4080583 Sala_2336 Sphingopyxis alaskensis RB2256 major intrinsic protein YP_617378.1 2464825 R 317655 CDS YP_617379.1 103487818 4080584 complement(2465481..2465984) 1 NC_008048.1 protein tyrosine phosphatase 2465984 4080584 Sala_2337 Sphingopyxis alaskensis RB2256 protein tyrosine phosphatase YP_617379.1 2465481 R 317655 CDS YP_617380.1 103487819 4080585 complement(2465989..2466474) 1 NC_008048.1 glyoxalase/bleomycin resistance protein/dioxygenase 2466474 4080585 Sala_2338 Sphingopyxis alaskensis RB2256 glyoxalase/bleomycin resistance protein/dioxygenase YP_617380.1 2465989 R 317655 CDS YP_617381.1 103487820 4080586 complement(2466471..2466815) 1 NC_008048.1 ArsR family transcriptional regulator 2466815 4080586 Sala_2339 Sphingopyxis alaskensis RB2256 ArsR family transcriptional regulator YP_617381.1 2466471 R 317655 CDS YP_617382.1 103487821 4080587 complement(2466936..2468750) 1 NC_008048.1 ABC transporter 2468750 4080587 Sala_2340 Sphingopyxis alaskensis RB2256 ABC transporter YP_617382.1 2466936 R 317655 CDS YP_617383.1 103487822 4080588 complement(2469115..2469690) 1 NC_008048.1 OstA-like protein 2469690 4080588 Sala_2341 Sphingopyxis alaskensis RB2256 OstA-like protein YP_617383.1 2469115 R 317655 CDS YP_617384.1 103487823 4080589 complement(2469687..2470346) 1 NC_008048.1 hypothetical protein 2470346 4080589 Sala_2342 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617384.1 2469687 R 317655 CDS YP_617385.1 103487824 4080590 complement(2470343..2470960) 1 NC_008048.1 3'-5' exonuclease 2470960 4080590 Sala_2343 Sphingopyxis alaskensis RB2256 3'-5' exonuclease YP_617385.1 2470343 R 317655 CDS YP_617386.1 103487825 4080591 2471222..2471971 1 NC_008048.1 cold-shock DNA-binding domain-containing protein 2471971 4080591 Sala_2344 Sphingopyxis alaskensis RB2256 cold-shock DNA-binding domain-containing protein YP_617386.1 2471222 D 317655 CDS YP_617387.1 103487826 4080592 complement(2472068..2472526) 1 NC_008048.1 hypothetical protein 2472526 4080592 Sala_2345 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617387.1 2472068 R 317655 CDS YP_617388.1 103487827 4080747 complement(2472523..2472744) 1 NC_008048.1 4-oxalocrotonate tautomerase 2472744 4080747 Sala_2346 Sphingopyxis alaskensis RB2256 4-oxalocrotonate tautomerase YP_617388.1 2472523 R 317655 CDS YP_617389.1 103487828 4080748 complement(2472758..2473234) 1 NC_008048.1 hypothetical protein 2473234 4080748 Sala_2347 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617389.1 2472758 R 317655 CDS YP_617390.1 103487829 4080749 complement(2473246..2473656) 1 NC_008048.1 glyoxalase/bleomycin resistance protein/dioxygenase 2473656 4080749 Sala_2348 Sphingopyxis alaskensis RB2256 glyoxalase/bleomycin resistance protein/dioxygenase YP_617390.1 2473246 R 317655 CDS YP_617391.1 103487830 4080750 complement(2473740..2474366) 1 NC_008048.1 glutathione S-transferase-like protein 2474366 4080750 Sala_2349 Sphingopyxis alaskensis RB2256 glutathione S-transferase-like protein YP_617391.1 2473740 R 317655 CDS YP_617392.1 103487831 4080751 complement(2474369..2474995) 1 NC_008048.1 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 2474995 4080751 Sala_2350 Sphingopyxis alaskensis RB2256 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_617392.1 2474369 R 317655 CDS YP_617393.1 103487832 4080752 2475138..2476028 1 NC_008048.1 LysR family transcriptional regulator 2476028 4080752 Sala_2351 Sphingopyxis alaskensis RB2256 LysR family transcriptional regulator YP_617393.1 2475138 D 317655 CDS YP_617394.1 103487833 4080753 complement(2476180..2477190) 1 NC_008048.1 MltA-interacting MipA 2477190 4080753 Sala_2352 Sphingopyxis alaskensis RB2256 MltA-interacting MipA YP_617394.1 2476180 R 317655 CDS YP_617395.1 103487834 4080754 2477283..2477615 1 NC_008048.1 hypothetical protein 2477615 4080754 Sala_2353 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617395.1 2477283 D 317655 CDS YP_617396.1 103487835 4080755 2477662..2479590 1 NC_008048.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 2479590 4080755 Sala_2354 Sphingopyxis alaskensis RB2256 1-deoxy-D-xylulose-5-phosphate synthase YP_617396.1 2477662 D 317655 CDS YP_617397.1 103487836 4080756 complement(2479796..2480215) 1 NC_008048.1 hypothetical protein 2480215 4080756 Sala_2355 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617397.1 2479796 R 317655 CDS YP_617398.1 103487837 4080757 complement(2480257..2480778) 1 NC_008048.1 lipoprotein signal peptidase 2480778 4080757 Sala_2356 Sphingopyxis alaskensis RB2256 lipoprotein signal peptidase YP_617398.1 2480257 R 317655 CDS YP_617399.1 103487838 4080758 complement(2480775..2483966) 1 NC_008048.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 2483966 ileS 4080758 ileS Sphingopyxis alaskensis RB2256 isoleucyl-tRNA synthetase YP_617399.1 2480775 R 317655 CDS YP_617400.1 103487839 4080759 complement(2484071..2485000) 1 NC_008048.1 riboflavin biosynthesis protein RibF 2485000 4080759 Sala_2358 Sphingopyxis alaskensis RB2256 riboflavin biosynthesis protein RibF YP_617400.1 2484071 R 317655 CDS YP_617401.1 103487840 4080760 complement(2484997..2486178) 1 NC_008048.1 peptidase M19 2486178 4080760 Sala_2359 Sphingopyxis alaskensis RB2256 peptidase M19 YP_617401.1 2484997 R 317655 CDS YP_617402.1 103487841 4080761 complement(2486323..2486820) 1 NC_008048.1 dihydrofolate reductase 2486820 4080761 Sala_2360 Sphingopyxis alaskensis RB2256 dihydrofolate reductase YP_617402.1 2486323 R 317655 CDS YP_617403.1 103487842 4080762 complement(2486817..2487902) 1 NC_008048.1 With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit 2487902 4080762 Sala_2361 Sphingopyxis alaskensis RB2256 phosphoribosylaminoimidazole carboxylase ATPase subunit YP_617403.1 2486817 R 317655 CDS YP_617404.1 103487843 4080763 complement(2487907..2488416) 1 NC_008048.1 phosphoribosylaminoimidazole carboxylase catalytic subunit 2488416 4080763 Sala_2362 Sphingopyxis alaskensis RB2256 phosphoribosylaminoimidazole carboxylase catalytic subunit YP_617404.1 2487907 R 317655 CDS YP_617405.1 103487844 4080764 2488624..2489268 1 NC_008048.1 diguanylate cyclase 2489268 4080764 Sala_2363 Sphingopyxis alaskensis RB2256 diguanylate cyclase YP_617405.1 2488624 D 317655 CDS YP_617406.1 103487845 4080765 2489322..2489651 1 NC_008048.1 hypothetical protein 2489651 4080765 Sala_2364 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617406.1 2489322 D 317655 CDS YP_617407.1 103487846 4080766 2489685..2490251 1 NC_008048.1 hypothetical protein 2490251 4080766 Sala_2365 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617407.1 2489685 D 317655 CDS YP_617408.1 103487847 4080805 2490366..2490821 1 NC_008048.1 Ferritin and Dps 2490821 4080805 Sala_2366 Sphingopyxis alaskensis RB2256 Ferritin and Dps YP_617408.1 2490366 D 317655 CDS YP_617409.1 103487848 4080806 complement(2490869..2491273) 1 NC_008048.1 glutathione-dependent formaldehyde-activating protein 2491273 4080806 Sala_2367 Sphingopyxis alaskensis RB2256 glutathione-dependent formaldehyde-activating protein YP_617409.1 2490869 R 317655 CDS YP_617410.1 103487849 4080807 complement(2491350..2492045) 1 NC_008048.1 type 11 helix-turn-helix protein 2492045 4080807 Sala_2368 Sphingopyxis alaskensis RB2256 type 11 helix-turn-helix protein YP_617410.1 2491350 R 317655 CDS YP_617411.1 103487850 4080808 complement(2492061..2492501) 1 NC_008048.1 hypothetical protein 2492501 4080808 Sala_2369 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617411.1 2492061 R 317655 CDS YP_617412.1 103487851 4080810 2492752..2494644 1 NC_008048.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 2494644 4080810 Sala_2370 Sphingopyxis alaskensis RB2256 thiamine biosynthesis protein ThiC YP_617412.1 2492752 D 317655 CDS YP_617413.1 103487852 4080811 2494676..2495110 1 NC_008048.1 hypothetical protein 2495110 4080811 Sala_2371 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617413.1 2494676 D 317655 CDS YP_617414.1 103487853 4080812 complement(2495138..2496097) 1 NC_008048.1 sulfotransferase 2496097 4080812 Sala_2372 Sphingopyxis alaskensis RB2256 sulfotransferase YP_617414.1 2495138 R 317655 CDS YP_617415.1 103487854 4080813 complement(2496139..2497017) 1 NC_008048.1 arylamine N-acetyltransferase 2497017 4080813 Sala_2373 Sphingopyxis alaskensis RB2256 arylamine N-acetyltransferase YP_617415.1 2496139 R 317655 CDS YP_617416.1 103487855 4080814 complement(2497243..2497671) 1 NC_008048.1 OsmC-like protein 2497671 4080814 Sala_2374 Sphingopyxis alaskensis RB2256 OsmC-like protein YP_617416.1 2497243 R 317655 CDS YP_617417.1 103487856 4080815 complement(2497764..2498111) 1 NC_008048.1 hypothetical protein 2498111 4080815 Sala_2375 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617417.1 2497764 R 317655 CDS YP_617418.1 103487857 4080816 complement(2498143..2498607) 1 NC_008048.1 hypothetical protein 2498607 4080816 Sala_2376 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617418.1 2498143 R 317655 CDS YP_617419.1 103487858 4080817 complement(2498604..2499362) 1 NC_008048.1 hypothetical protein 2499362 4080817 Sala_2377 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617419.1 2498604 R 317655 CDS YP_617420.1 103487859 4080818 complement(2499373..2500077) 1 NC_008048.1 uracil-DNA glycosylase 2500077 4080818 Sala_2378 Sphingopyxis alaskensis RB2256 uracil-DNA glycosylase YP_617420.1 2499373 R 317655 CDS YP_617421.1 103487860 4080819 complement(2500247..2503351) 1 NC_008048.1 TonB-dependent receptor 2503351 4080819 Sala_2379 Sphingopyxis alaskensis RB2256 TonB-dependent receptor YP_617421.1 2500247 R 317655 CDS YP_617422.1 103487861 4080820 2503512..2503841 1 NC_008048.1 phosphoribosyl-ATP pyrophosphohydrolase 2503841 4080820 Sala_2380 Sphingopyxis alaskensis RB2256 phosphoribosyl-ATP pyrophosphohydrolase YP_617422.1 2503512 D 317655 CDS YP_617423.1 103487862 4080821 2503973..2504350 1 NC_008048.1 histidine triad (HIT) protein 2504350 4080821 Sala_2381 Sphingopyxis alaskensis RB2256 histidine triad (HIT) protein YP_617423.1 2503973 D 317655 CDS YP_617424.1 103487863 4080822 2504500..2510277 1 NC_008048.1 alpha-2-macroglobulin-like protein 2510277 4080822 Sala_2382 Sphingopyxis alaskensis RB2256 alpha-2-macroglobulin-like protein YP_617424.1 2504500 D 317655 CDS YP_617425.1 103487864 4080536 2510440..2512629 1 NC_008048.1 penicillin-binding protein 1C 2512629 4080536 Sala_2383 Sphingopyxis alaskensis RB2256 penicillin-binding protein 1C YP_617425.1 2510440 D 317655 CDS YP_617426.1 103487865 4080537 2512731..2514287 1 NC_008048.1 amino acid permease 2514287 4080537 Sala_2384 Sphingopyxis alaskensis RB2256 amino acid permease YP_617426.1 2512731 D 317655 CDS YP_617427.1 103487866 4080538 complement(2514466..2515710) 1 NC_008048.1 Bcr/CflA subfamily drug resistance transporter 2515710 4080538 Sala_2385 Sphingopyxis alaskensis RB2256 Bcr/CflA subfamily drug resistance transporter YP_617427.1 2514466 R 317655 CDS YP_617428.1 103487867 4080539 complement(2515952..2516254) 1 NC_008048.1 hypothetical protein 2516254 4080539 Sala_2386 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617428.1 2515952 R 317655 CDS YP_617429.1 103487868 4080540 complement(2516281..2519160) 1 NC_008048.1 peptidase M16-like protein 2519160 4080540 Sala_2387 Sphingopyxis alaskensis RB2256 peptidase M16-like protein YP_617429.1 2516281 R 317655 CDS YP_617430.1 103487869 4080541 complement(2519256..2521412) 1 NC_008048.1 penicillin amidase 2521412 4080541 Sala_2388 Sphingopyxis alaskensis RB2256 penicillin amidase YP_617430.1 2519256 R 317655 CDS YP_617431.1 103487870 4080542 2521467..2523137 1 NC_008048.1 leucyl aminopeptidase 2523137 4080542 Sala_2389 Sphingopyxis alaskensis RB2256 leucyl aminopeptidase YP_617431.1 2521467 D 317655 CDS YP_617432.1 103487871 4080543 complement(2523359..2523784) 1 NC_008048.1 hypothetical protein 2523784 4080543 Sala_2390 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617432.1 2523359 R 317655 CDS YP_617433.1 103487872 4080544 2523934..2526513 1 NC_008048.1 ATPase 2526513 4080544 Sala_2391 Sphingopyxis alaskensis RB2256 ATPase YP_617433.1 2523934 D 317655 CDS YP_617434.1 103487873 4080545 complement(2526467..2526748) 1 NC_008048.1 hypothetical protein 2526748 4080545 Sala_2392 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617434.1 2526467 R 317655 CDS YP_617435.1 103487874 4080546 complement(2526745..2529879) 1 NC_008048.1 heavy metal efflux pump CzcA 2529879 4080546 Sala_2393 Sphingopyxis alaskensis RB2256 heavy metal efflux pump CzcA YP_617435.1 2526745 R 317655 CDS YP_617436.1 103487875 4080547 complement(2529876..2531108) 1 NC_008048.1 secretion protein HlyD 2531108 4080547 Sala_2394 Sphingopyxis alaskensis RB2256 secretion protein HlyD YP_617436.1 2529876 R 317655 CDS YP_617437.1 103487876 4080548 complement(2531105..2532334) 1 NC_008048.1 CzcC family heavy metal RND efflux outer membrane protein 2532334 4080548 Sala_2395 Sphingopyxis alaskensis RB2256 CzcC family heavy metal RND efflux outer membrane protein YP_617437.1 2531105 R 317655 CDS YP_617438.1 103487877 4080549 complement(2532727..2533128) 1 NC_008048.1 hypothetical protein 2533128 4080549 Sala_2396 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617438.1 2532727 R 317655 CDS YP_617439.1 103487878 4080550 complement(2533378..2534631) 1 NC_008048.1 hypothetical protein 2534631 4080550 Sala_2397 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617439.1 2533378 R 317655 CDS YP_617440.1 103487879 4080551 2535539..2535952 1 NC_008048.1 hypothetical protein 2535952 4080551 Sala_2399 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617440.1 2535539 D 317655 CDS YP_617441.1 103487880 4080552 complement(2535893..2536843) 1 NC_008048.1 integrase catalytic subunit 2536843 4080552 Sala_2400 Sphingopyxis alaskensis RB2256 integrase catalytic subunit YP_617441.1 2535893 R 317655 CDS YP_617442.1 103487881 4080553 2537090..2537818 1 NC_008048.1 phage integrase 2537818 4080553 Sala_2401 Sphingopyxis alaskensis RB2256 phage integrase YP_617442.1 2537090 D 317655 CDS YP_617443.1 103487882 4080554 complement(2537845..2538270) 1 NC_008048.1 hypothetical protein 2538270 4080554 Sala_2402 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617443.1 2537845 R 317655 CDS YP_617444.1 103487883 4080555 2538365..2538694 1 NC_008048.1 ArsR family transcriptional regulator 2538694 4080555 Sala_2403 Sphingopyxis alaskensis RB2256 ArsR family transcriptional regulator YP_617444.1 2538365 D 317655 CDS YP_617445.1 103487884 4080842 2538708..2539136 1 NC_008048.1 arsenate reductase 2539136 4080842 Sala_2404 Sphingopyxis alaskensis RB2256 arsenate reductase YP_617445.1 2538708 D 317655 CDS YP_617446.1 103487885 4080843 2539146..2540210 1 NC_008048.1 arsenical-resistance protein 2540210 4080843 Sala_2405 Sphingopyxis alaskensis RB2256 arsenical-resistance protein YP_617446.1 2539146 D 317655 CDS YP_617447.1 103487886 4080844 2540216..2540971 1 NC_008048.1 NADPH-dependent FMN reductase 2540971 4080844 Sala_2406 Sphingopyxis alaskensis RB2256 NADPH-dependent FMN reductase YP_617447.1 2540216 D 317655 CDS YP_617448.1 103487887 4080845 2541134..2542459 1 NC_008048.1 hypothetical protein 2542459 4080845 Sala_2407 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617448.1 2541134 D 317655 CDS YP_617449.1 103487888 4080846 2542523..2543323 1 NC_008048.1 histidine utilization repressor 2543323 4080846 Sala_2408 Sphingopyxis alaskensis RB2256 histidine utilization repressor YP_617449.1 2542523 D 317655 CDS YP_617450.1 103487889 4080847 complement(2543330..2544064) 1 NC_008048.1 PepSY-associated TM helix family protein 2544064 4080847 Sala_2409 Sphingopyxis alaskensis RB2256 PepSY-associated TM helix family protein YP_617450.1 2543330 R 317655 CDS YP_617451.1 103487890 4080848 complement(2544061..2544765) 1 NC_008048.1 hypothetical protein 2544765 4080848 Sala_2410 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617451.1 2544061 R 317655 CDS YP_617452.1 103487891 4080849 complement(2544777..2547482) 1 NC_008048.1 TonB-dependent receptor 2547482 4080849 Sala_2411 Sphingopyxis alaskensis RB2256 TonB-dependent receptor YP_617452.1 2544777 R 317655 CDS YP_617453.1 103487892 4080850 complement(2547768..2548520) 1 NC_008048.1 ABC transporter 2548520 4080850 Sala_2412 Sphingopyxis alaskensis RB2256 ABC transporter YP_617453.1 2547768 R 317655 CDS YP_617454.1 103487893 4080851 complement(2548517..2549764) 1 NC_008048.1 cystathionine beta-lyase 2549764 4080851 Sala_2413 Sphingopyxis alaskensis RB2256 cystathionine beta-lyase YP_617454.1 2548517 R 317655 CDS YP_617455.1 103487894 4080852 complement(2549754..2551946) 1 NC_008048.1 amino acid ABC transporter permease 2551946 4080852 Sala_2414 Sphingopyxis alaskensis RB2256 amino acid ABC transporter permease YP_617455.1 2549754 R 317655 CDS YP_617456.1 103487895 4080853 complement(2551943..2553040) 1 NC_008048.1 extracellular solute-binding protein 2553040 4080853 Sala_2415 Sphingopyxis alaskensis RB2256 extracellular solute-binding protein YP_617456.1 2551943 R 317655 CDS YP_617457.1 103487896 4080854 2553069..2553974 1 NC_008048.1 LysR family transcriptional regulator 2553974 4080854 Sala_2416 Sphingopyxis alaskensis RB2256 LysR family transcriptional regulator YP_617457.1 2553069 D 317655 CDS YP_617458.1 103487897 4080855 complement(2554011..2556482) 1 NC_008048.1 TonB-dependent receptor, plug 2556482 4080855 Sala_2417 Sphingopyxis alaskensis RB2256 TonB-dependent receptor, plug YP_617458.1 2554011 R 317655 CDS YP_617459.1 103487898 4080856 2556595..2557053 1 NC_008048.1 hypothetical protein 2557053 4080856 Sala_2418 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617459.1 2556595 D 317655 CDS YP_617460.1 103487899 4080857 complement(2557098..2557622) 1 NC_008048.1 hypothetical protein 2557622 4080857 Sala_2419 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617460.1 2557098 R 317655 CDS YP_617461.1 103487900 4080858 complement(2557624..2558067) 1 NC_008048.1 hypothetical protein 2558067 4080858 Sala_2420 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617461.1 2557624 R 317655 CDS YP_617462.1 103487901 4080859 complement(2558106..2559317) 1 NC_008048.1 copper resistance B 2559317 4080859 Sala_2421 Sphingopyxis alaskensis RB2256 copper resistance B YP_617462.1 2558106 R 317655 CDS YP_617463.1 103487902 4080860 complement(2559314..2561095) 1 NC_008048.1 copper-resistance protein CopA 2561095 4080860 Sala_2422 Sphingopyxis alaskensis RB2256 copper-resistance protein CopA YP_617463.1 2559314 R 317655 CDS YP_617464.1 103487903 4081129 complement(2561269..2561853) 1 NC_008048.1 ECF subfamily RNA polymerase sigma-24 factor 2561853 4081129 Sala_2423 Sphingopyxis alaskensis RB2256 ECF subfamily RNA polymerase sigma-24 factor YP_617464.1 2561269 R 317655 CDS YP_617465.1 103487904 4081130 complement(2561850..2562287) 1 NC_008048.1 hypothetical protein 2562287 4081130 Sala_2424 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617465.1 2561850 R 317655 CDS YP_617466.1 103487905 4081131 2562700..2563083 1 NC_008048.1 copper resistance protein CopC 2563083 4081131 Sala_2425 Sphingopyxis alaskensis RB2256 copper resistance protein CopC YP_617466.1 2562700 D 317655 CDS YP_617467.1 103487906 4081132 2563090..2564058 1 NC_008048.1 copper resistance D 2564058 4081132 Sala_2426 Sphingopyxis alaskensis RB2256 copper resistance D YP_617467.1 2563090 D 317655 CDS YP_617468.1 103487907 4081133 2564091..2564780 1 NC_008048.1 AraC family transcriptional regulator 2564780 4081133 Sala_2427 Sphingopyxis alaskensis RB2256 AraC family transcriptional regulator YP_617468.1 2564091 D 317655 CDS YP_617469.1 103487908 4081134 2564918..2565595 1 NC_008048.1 type 12 methyltransferase 2565595 4081134 Sala_2428 Sphingopyxis alaskensis RB2256 type 12 methyltransferase YP_617469.1 2564918 D 317655 CDS YP_617470.1 103487909 4081135 2565762..2568083 1 NC_008048.1 copper-translocating P-type ATPase 2568083 4081135 Sala_2429 Sphingopyxis alaskensis RB2256 copper-translocating P-type ATPase YP_617470.1 2565762 D 317655 CDS YP_617471.1 103487910 4081136 2568136..2568612 1 NC_008048.1 hypothetical protein 2568612 4081136 Sala_2430 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617471.1 2568136 D 317655 CDS YP_617472.1 103487911 4081137 2568841..2569470 1 NC_008048.1 cytochrome c family protein 2569470 4081137 Sala_2431 Sphingopyxis alaskensis RB2256 cytochrome c family protein YP_617472.1 2568841 D 317655 CDS YP_617473.1 103487912 4081138 2569656..2570933 1 NC_008048.1 hypothetical protein 2570933 4081138 Sala_2432 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617473.1 2569656 D 317655 CDS YP_617474.1 103487913 4081139 complement(2571241..2573355) 1 NC_008048.1 TonB-dependent receptor 2573355 4081139 Sala_2433 Sphingopyxis alaskensis RB2256 TonB-dependent receptor YP_617474.1 2571241 R 317655 CDS YP_617475.1 103487914 4081140 complement(2574002..2574409) 1 NC_008048.1 MerR family transcriptional regulator 2574409 4081140 Sala_2435 Sphingopyxis alaskensis RB2256 MerR family transcriptional regulator YP_617475.1 2574002 R 317655 CDS YP_617476.1 103487915 4081141 2574427..2575302 1 NC_008048.1 glutaredoxin 2575302 4081141 Sala_2436 Sphingopyxis alaskensis RB2256 glutaredoxin YP_617476.1 2574427 D 317655 CDS YP_617477.1 103487916 4081142 2575405..2575767 1 NC_008048.1 hypothetical protein 2575767 4081142 Sala_2437 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617477.1 2575405 D 317655 CDS YP_617478.1 103487917 4081143 2575832..2576098 1 NC_008048.1 hypothetical protein 2576098 4081143 Sala_2438 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617478.1 2575832 D 317655 CDS YP_617479.1 103487918 4081144 2576165..2577391 1 NC_008048.1 CzcC family heavy metal RND efflux outer membrane protein 2577391 4081144 Sala_2439 Sphingopyxis alaskensis RB2256 CzcC family heavy metal RND efflux outer membrane protein YP_617479.1 2576165 D 317655 CDS YP_617480.1 103487919 4081145 2577388..2578614 1 NC_008048.1 secretion protein HlyD 2578614 4081145 Sala_2440 Sphingopyxis alaskensis RB2256 secretion protein HlyD YP_617480.1 2577388 D 317655 CDS YP_617481.1 103487920 4081146 2578611..2581745 1 NC_008048.1 heavy metal efflux pump CzcA 2581745 4081146 Sala_2441 Sphingopyxis alaskensis RB2256 heavy metal efflux pump CzcA YP_617481.1 2578611 D 317655 CDS YP_617482.1 103487921 4081147 2581742..2582110 1 NC_008048.1 putative copper efflux system periplasmic protein CusF 2582110 4081147 Sala_2442 Sphingopyxis alaskensis RB2256 putative copper efflux system periplasmic protein CusF YP_617482.1 2581742 D 317655 CDS YP_617483.1 103487922 4081148 complement(2582196..2582618) 1 NC_008048.1 MerR family transcriptional regulator 2582618 4081148 Sala_2443 Sphingopyxis alaskensis RB2256 MerR family transcriptional regulator YP_617483.1 2582196 R 317655 CDS YP_617484.1 103487923 4081321 2582648..2583385 1 NC_008048.1 cation efflux protein 2583385 4081321 Sala_2444 Sphingopyxis alaskensis RB2256 cation efflux protein YP_617484.1 2582648 D 317655 CDS YP_617485.1 103487924 4081322 2583448..2583819 1 NC_008048.1 hypothetical protein 2583819 4081322 Sala_2445 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617485.1 2583448 D 317655 CDS YP_617486.1 103487925 4081323 2583828..2584148 1 NC_008048.1 hypothetical protein 2584148 4081323 Sala_2446 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617486.1 2583828 D 317655 CDS YP_617487.1 103487926 4081324 2584208..2585479 1 NC_008048.1 outer membrane efflux protein 2585479 4081324 Sala_2447 Sphingopyxis alaskensis RB2256 outer membrane efflux protein YP_617487.1 2584208 D 317655 CDS YP_617488.1 103487927 4081325 2585484..2586632 1 NC_008048.1 secretion protein HlyD 2586632 4081325 Sala_2448 Sphingopyxis alaskensis RB2256 secretion protein HlyD YP_617488.1 2585484 D 317655 CDS YP_617489.1 103487928 4081326 2586636..2589863 1 NC_008048.1 heavy metal efflux pump CzcA 2589863 4081326 Sala_2449 Sphingopyxis alaskensis RB2256 heavy metal efflux pump CzcA YP_617489.1 2586636 D 317655 CDS YP_617490.1 103487929 4081327 2590694..2590867 1 NC_008048.1 transposase IS3/IS911 2590867 4081327 Sala_2450 Sphingopyxis alaskensis RB2256 transposase IS3/IS911 YP_617490.1 2590694 D 317655 CDS YP_617491.1 103487930 4081328 2590864..2591844 1 NC_008048.1 integrase catalytic subunit 2591844 4081328 Sala_2451 Sphingopyxis alaskensis RB2256 integrase catalytic subunit YP_617491.1 2590864 D 317655 CDS YP_617492.1 103487931 4081329 complement(2591975..2592229) 1 NC_008048.1 hypothetical protein 2592229 4081329 Sala_2452 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617492.1 2591975 R 317655 CDS YP_617493.1 103487932 4081330 2592230..2594527 1 NC_008048.1 heavy metal translocating P-type ATPase 2594527 4081330 Sala_2453 Sphingopyxis alaskensis RB2256 heavy metal translocating P-type ATPase YP_617493.1 2592230 D 317655 CDS YP_617494.1 103487933 4081331 2594978..2596498 1 NC_008048.1 aldehyde dehydrogenase 2596498 4081331 Sala_2454 Sphingopyxis alaskensis RB2256 aldehyde dehydrogenase YP_617494.1 2594978 D 317655 CDS YP_617495.1 103487934 4081332 2596523..2597548 1 NC_008048.1 alcohol dehydrogenase GroES-like protein 2597548 4081332 Sala_2455 Sphingopyxis alaskensis RB2256 alcohol dehydrogenase GroES-like protein YP_617495.1 2596523 D 317655 CDS YP_617496.1 103487935 4081333 2597575..2599269 1 NC_008048.1 copper-resistance protein CopA 2599269 4081333 Sala_2456 Sphingopyxis alaskensis RB2256 copper-resistance protein CopA YP_617496.1 2597575 D 317655 CDS YP_617497.1 103487936 4081334 2599266..2600237 1 NC_008048.1 copper resistance B 2600237 4081334 Sala_2457 Sphingopyxis alaskensis RB2256 copper resistance B YP_617497.1 2599266 D 317655 CDS YP_617498.1 103487937 4081335 2600495..2600761 1 NC_008048.1 hypothetical protein 2600761 4081335 Sala_2458 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617498.1 2600495 D 317655 CDS YP_617499.1 103487938 4081336 2600851..2602395 1 NC_008048.1 PAS/PAC sensor signal transduction histidine kinase 2602395 4081336 Sala_2459 Sphingopyxis alaskensis RB2256 PAS/PAC sensor signal transduction histidine kinase YP_617499.1 2600851 D 317655 CDS YP_617500.1 103487939 4081337 2602385..2603017 1 NC_008048.1 two component LuxR family transcriptional regulator 2603017 4081337 Sala_2460 Sphingopyxis alaskensis RB2256 two component LuxR family transcriptional regulator YP_617500.1 2602385 D 317655 CDS YP_617501.1 103487940 4081338 2603092..2603490 1 NC_008048.1 response regulator receiver protein 2603490 4081338 Sala_2461 Sphingopyxis alaskensis RB2256 response regulator receiver protein YP_617501.1 2603092 D 317655 CDS YP_617502.1 103487941 4081339 complement(2603481..2604551) 1 NC_008048.1 hypothetical protein 2604551 4081339 Sala_2462 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617502.1 2603481 R 317655 CDS YP_617503.1 103487942 4081301 complement(2604787..2605236) 1 NC_008048.1 hypothetical protein 2605236 4081301 Sala_2463 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617503.1 2604787 R 317655 CDS YP_617504.1 103487943 4081302 complement(2605278..2605625) 1 NC_008048.1 hypothetical protein 2605625 4081302 Sala_2464 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617504.1 2605278 R 317655 CDS YP_617505.1 103487944 4081303 complement(2605806..2606210) 1 NC_008048.1 hypothetical protein 2606210 4081303 Sala_2465 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617505.1 2605806 R 317655 CDS YP_617506.1 103487945 4081304 complement(2606197..2606910) 1 NC_008048.1 hypothetical protein 2606910 4081304 Sala_2466 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617506.1 2606197 R 317655 CDS YP_617507.1 103487946 4081305 complement(2606907..2607632) 1 NC_008048.1 hypothetical protein 2607632 4081305 Sala_2467 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617507.1 2606907 R 317655 CDS YP_617508.1 103487947 4081306 complement(2607632..2609509) 1 NC_008048.1 oxidoreductase FAD-binding region 2609509 4081306 Sala_2468 Sphingopyxis alaskensis RB2256 oxidoreductase FAD-binding region YP_617508.1 2607632 R 317655 CDS YP_617509.1 103487948 4081307 complement(2609538..2609897) 1 NC_008048.1 hypothetical protein 2609897 4081307 Sala_2469 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617509.1 2609538 R 317655 CDS YP_617510.1 103487949 4081308 complement(2610216..2610632) 1 NC_008048.1 MerR family transcriptional regulator 2610632 4081308 Sala_2470 Sphingopyxis alaskensis RB2256 MerR family transcriptional regulator YP_617510.1 2610216 R 317655 CDS YP_617511.1 103487950 4081309 complement(2610829..2611191) 1 NC_008048.1 hypothetical protein 2611191 4081309 Sala_2471 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617511.1 2610829 R 317655 CDS YP_617512.1 103487951 4081310 complement(2611327..2612226) 1 NC_008048.1 Catalyzes the formation of PRPP from ATP and ribose 5-phosphate; phosphoribosylpyrophosphate synthetase 2612226 4081310 Sala_2472 Sphingopyxis alaskensis RB2256 phosphoribosylpyrophosphate synthetase YP_617512.1 2611327 R 317655 CDS YP_617513.1 103487952 4081311 complement(2612223..2613767) 1 NC_008048.1 catalyzes the formation of thymine and 2-deoxy-alpha-D-ribose 1-phosphate from thymidine; thymidine phosphorylase 2613767 4081311 Sala_2473 Sphingopyxis alaskensis RB2256 thymidine phosphorylase YP_617513.1 2612223 R 317655 CDS YP_617514.1 103487953 4081312 complement(2613764..2615185) 1 NC_008048.1 beta-lactamase-like protein 2615185 4081312 Sala_2474 Sphingopyxis alaskensis RB2256 beta-lactamase-like protein YP_617514.1 2613764 R 317655 CDS YP_617515.1 103487954 4081313 complement(2615345..2615644) 1 NC_008048.1 hypothetical protein 2615644 4081313 Sala_2475 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617515.1 2615345 R 317655 CDS YP_617516.1 103487955 4081314 complement(2615744..2615965) 1 NC_008048.1 hypothetical protein 2615965 4081314 Sala_2476 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617516.1 2615744 R 317655 CDS YP_617517.1 103487956 4081315 complement(2615962..2617143) 1 NC_008048.1 conjugation TrbI-like protein 2617143 4081315 Sala_2477 Sphingopyxis alaskensis RB2256 conjugation TrbI-like protein YP_617517.1 2615962 R 317655 CDS YP_617518.1 103487957 4081316 complement(2617173..2618024) 1 NC_008048.1 conjugal transfer protein TrbG/VirB9/CagX 2618024 4081316 Sala_2478 Sphingopyxis alaskensis RB2256 conjugal transfer protein TrbG/VirB9/CagX YP_617518.1 2617173 R 317655 CDS YP_617519.1 103487958 4081317 complement(2618021..2618704) 1 NC_008048.1 conjugal transfer protein TrbF 2618704 4081317 Sala_2479 Sphingopyxis alaskensis RB2256 conjugal transfer protein TrbF YP_617519.1 2618021 R 317655 CDS YP_617520.1 103487959 4081318 complement(2618711..2619991) 1 NC_008048.1 type IV secretion VirB6 family; conjugal transfer protein TrbL 2619991 4081318 Sala_2480 Sphingopyxis alaskensis RB2256 conjugal transfer protein TrbL YP_617520.1 2618711 R 317655 CDS YP_617521.1 103487960 4081319 complement(2619988..2620242) 1 NC_008048.1 hypothetical protein 2620242 4081319 Sala_2481 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617521.1 2619988 R 317655 CDS YP_617522.1 103487961 4081320 complement(2620244..2620963) 1 NC_008048.1 conjugal transfer protein TrbJ 2620963 4081320 Sala_2482 Sphingopyxis alaskensis RB2256 conjugal transfer protein TrbJ YP_617522.1 2620244 R 317655 CDS YP_617523.1 103487962 4081359 complement(2620969..2623413) 1 NC_008048.1 type IV secretion system VirB4 family; conjugal transfer ATPase TrbE 2623413 4081359 Sala_2483 Sphingopyxis alaskensis RB2256 conjugal transfer ATPase TrbE YP_617523.1 2620969 R 317655 CDS YP_617524.1 103487963 4081360 complement(2623679..2624011) 1 NC_008048.1 conjugal transfer protein TrbC 2624011 4081360 Sala_2484 Sphingopyxis alaskensis RB2256 conjugal transfer protein TrbC YP_617524.1 2623679 R 317655 CDS YP_617525.1 103487964 4081361 complement(2624008..2624991) 1 NC_008048.1 type II secretion system protein E 2624991 4081361 Sala_2485 Sphingopyxis alaskensis RB2256 type II secretion system protein E YP_617525.1 2624008 R 317655 CDS YP_617526.1 103487965 4081362 2625126..2625701 1 NC_008048.1 LuxR family transcriptional regulator 2625701 4081362 Sala_2486 Sphingopyxis alaskensis RB2256 LuxR family transcriptional regulator YP_617526.1 2625126 D 317655 CDS YP_617527.1 103487966 4081363 2625761..2626093 1 NC_008048.1 hypothetical protein 2626093 4081363 Sala_2487 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617527.1 2625761 D 317655 CDS YP_617528.1 103487967 4081364 2626482..2627546 1 NC_008048.1 DNA repair protein RadC 2627546 4081364 Sala_2488 Sphingopyxis alaskensis RB2256 DNA repair protein RadC YP_617528.1 2626482 D 317655 CDS YP_617529.1 103487968 4081365 complement(2627631..2630441) 1 NC_008048.1 TrwC protein 2630441 4081365 Sala_2489 Sphingopyxis alaskensis RB2256 TrwC protein YP_617529.1 2627631 R 317655 CDS YP_617530.1 103487969 4081366 complement(2630441..2632330) 1 NC_008048.1 Type IV secretory pathway VirD4 components-like protein 2632330 4081366 Sala_2490 Sphingopyxis alaskensis RB2256 Type IV secretory pathway VirD4 components-like protein YP_617530.1 2630441 R 317655 CDS YP_617531.1 103487970 4081367 complement(2632330..2632827) 1 NC_008048.1 hypothetical protein 2632827 4081367 Sala_2491 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617531.1 2632330 R 317655 CDS YP_617532.1 103487971 4081368 complement(2633048..2633776) 1 NC_008048.1 lytic transglycosylase, catalytic 2633776 4081368 Sala_2492 Sphingopyxis alaskensis RB2256 lytic transglycosylase, catalytic YP_617532.1 2633048 R 317655 CDS YP_617533.1 103487972 4081369 complement(2633773..2634363) 1 NC_008048.1 conjugal transfer protein traF 2634363 4081369 Sala_2493 Sphingopyxis alaskensis RB2256 conjugal transfer protein traF YP_617533.1 2633773 R 317655 CDS YP_617534.1 103487973 4081370 complement(2634360..2634905) 1 NC_008048.1 hypothetical protein 2634905 4081370 Sala_2494 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617534.1 2634360 R 317655 CDS YP_617535.1 103487974 4081371 complement(2634905..2635147) 1 NC_008048.1 putative transcriptional regulator 2635147 4081371 Sala_2495 Sphingopyxis alaskensis RB2256 putative transcriptional regulator YP_617535.1 2634905 R 317655 CDS YP_617536.1 103487975 4081372 complement(2635250..2635759) 1 NC_008048.1 hypothetical protein 2635759 4081372 Sala_2496 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617536.1 2635250 R 317655 CDS YP_617537.1 103487976 4081373 complement(2636150..2636464) 1 NC_008048.1 hypothetical protein 2636464 4081373 Sala_2497 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617537.1 2636150 R 317655 CDS YP_617538.1 103487977 4081374 complement(2636775..2637245) 1 NC_008048.1 hypothetical protein 2637245 4081374 Sala_2498 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617538.1 2636775 R 317655 CDS YP_617539.1 103487978 4081375 complement(2637330..2637572) 1 NC_008048.1 hypothetical protein 2637572 4081375 Sala_2499 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617539.1 2637330 R 317655 CDS YP_617540.1 103487979 4081376 complement(2637612..2637914) 1 NC_008048.1 hypothetical protein 2637914 4081376 Sala_2500 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617540.1 2637612 R 317655 CDS YP_617541.1 103487980 4081377 complement(2637963..2638283) 1 NC_008048.1 hypothetical protein 2638283 4081377 Sala_2501 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617541.1 2637963 R 317655 CDS YP_617542.1 103487981 4081613 complement(2638892..2639146) 1 NC_008048.1 hypothetical protein 2639146 4081613 Sala_2502 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617542.1 2638892 R 317655 CDS YP_617543.1 103487982 4081614 complement(2639246..2639809) 1 NC_008048.1 hypothetical protein 2639809 4081614 Sala_2503 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617543.1 2639246 R 317655 CDS YP_617544.1 103487983 4081615 complement(2639870..2640478) 1 NC_008048.1 hypothetical protein 2640478 4081615 Sala_2504 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617544.1 2639870 R 317655 CDS YP_617545.1 103487984 4081616 complement(2640552..2642795) 1 NC_008048.1 TonB-dependent receptor 2642795 4081616 Sala_2505 Sphingopyxis alaskensis RB2256 TonB-dependent receptor YP_617545.1 2640552 R 317655 CDS YP_617546.1 103487985 4081617 complement(2642893..2644206) 1 NC_008048.1 hypothetical protein 2644206 4081617 Sala_2506 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617546.1 2642893 R 317655 CDS YP_617547.1 103487986 4081618 complement(2644203..2644952) 1 NC_008048.1 GntR family transcriptional regulator 2644952 4081618 Sala_2507 Sphingopyxis alaskensis RB2256 GntR family transcriptional regulator YP_617547.1 2644203 R 317655 CDS YP_617548.1 103487987 4081619 2645077..2646087 1 NC_008048.1 beta-lactamase 2646087 4081619 Sala_2508 Sphingopyxis alaskensis RB2256 beta-lactamase YP_617548.1 2645077 D 317655 CDS YP_617549.1 103487988 4081620 complement(2646202..2646657) 1 NC_008048.1 MerR family transcriptional regulator 2646657 4081620 Sala_2509 Sphingopyxis alaskensis RB2256 MerR family transcriptional regulator YP_617549.1 2646202 R 317655 CDS YP_617550.1 103487989 4081621 2646732..2647103 1 NC_008048.1 mercuric transporter MerT 2647103 4081621 Sala_2510 Sphingopyxis alaskensis RB2256 mercuric transporter MerT YP_617550.1 2646732 D 317655 CDS YP_617551.1 103487990 4081622 2647100..2647399 1 NC_008048.1 mercuric transport protein periplasmic protein 2647399 4081622 Sala_2511 Sphingopyxis alaskensis RB2256 mercuric transport protein periplasmic protein YP_617551.1 2647100 D 317655 CDS YP_617552.1 103487991 4081623 2647410..2648849 1 NC_008048.1 mercuric reductase MerA 2648849 4081623 Sala_2512 Sphingopyxis alaskensis RB2256 mercuric reductase MerA YP_617552.1 2647410 D 317655 CDS YP_617553.1 103487992 4081624 2648883..2649299 1 NC_008048.1 hypothetical protein 2649299 4081624 Sala_2513 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617553.1 2648883 D 317655 CDS YP_617554.1 103487993 4081625 complement(2649428..2650342) 1 NC_008048.1 Abi family protein 2650342 4081625 Sala_2514 Sphingopyxis alaskensis RB2256 Abi family protein YP_617554.1 2649428 R 317655 CDS YP_617555.1 103487994 4081626 complement(2650569..2651495) 1 NC_008048.1 similar to SMa10599; hypothetical protein 2651495 4081626 Sala_2515 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617555.1 2650569 R 317655 CDS YP_617556.1 103487995 4081627 complement(2651561..2652502) 1 NC_008048.1 hypothetical protein 2652502 4081627 Sala_2516 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617556.1 2651561 R 317655 CDS YP_617557.1 103487996 4081628 complement(2652821..2653873) 1 NC_008048.1 hypothetical protein 2653873 4081628 Sala_2517 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617557.1 2652821 R 317655 CDS YP_617558.1 103487997 4081629 complement(2654126..2655091) 1 NC_008048.1 hypothetical protein 2655091 4081629 Sala_2518 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617558.1 2654126 R 317655 CDS YP_617559.1 103487998 4081630 complement(2655095..2656693) 1 NC_008048.1 hypothetical protein 2656693 4081630 Sala_2519 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617559.1 2655095 R 317655 CDS YP_617560.1 103487999 4081631 complement(2656915..2658999) 1 NC_008048.1 ParB-like nuclease 2658999 4081631 Sala_2520 Sphingopyxis alaskensis RB2256 ParB-like nuclease YP_617560.1 2656915 R 317655 CDS YP_617561.1 103488000 4081632 complement(2659123..2659734) 1 NC_008048.1 hypothetical protein 2659734 4081632 Sala_2521 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617561.1 2659123 R 317655 CDS YP_617562.1 103488001 4081496 2659736..2659954 1 NC_008048.1 hypothetical protein 2659954 4081496 Sala_2522 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617562.1 2659736 D 317655 CDS YP_617563.1 103488002 4081497 2660297..2660806 1 NC_008048.1 hypothetical protein 2660806 4081497 Sala_2523 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617563.1 2660297 D 317655 CDS YP_617564.1 103488003 4081498 2660821..2661471 1 NC_008048.1 hypothetical protein 2661471 4081498 Sala_2524 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617564.1 2660821 D 317655 CDS YP_617565.1 103488004 4081499 2661658..2662488 1 NC_008048.1 LuxR family transcriptional regulator 2662488 4081499 Sala_2525 Sphingopyxis alaskensis RB2256 LuxR family transcriptional regulator YP_617565.1 2661658 D 317655 CDS YP_617566.1 103488005 4081500 2662586..2663212 1 NC_008048.1 autoinducer synthesis protein 2663212 4081500 Sala_2526 Sphingopyxis alaskensis RB2256 autoinducer synthesis protein YP_617566.1 2662586 D 317655 CDS YP_617567.1 103488006 4081501 2663209..2664087 1 NC_008048.1 phytanoyl-CoA dioxygenase 2664087 4081501 Sala_2527 Sphingopyxis alaskensis RB2256 phytanoyl-CoA dioxygenase YP_617567.1 2663209 D 317655 CDS YP_617568.1 103488007 4081502 2664084..2664695 1 NC_008048.1 regulatory protein GntR 2664695 4081502 Sala_2528 Sphingopyxis alaskensis RB2256 regulatory protein GntR YP_617568.1 2664084 D 317655 CDS YP_617569.1 103488008 4081503 2664950..2665558 1 NC_008048.1 ECF subfamily RNA polymerase sigma-24 factor 2665558 4081503 Sala_2529 Sphingopyxis alaskensis RB2256 ECF subfamily RNA polymerase sigma-24 factor YP_617569.1 2664950 D 317655 CDS YP_617570.1 103488009 4081504 2665555..2666544 1 NC_008048.1 putative FecR protein 2666544 4081504 Sala_2530 Sphingopyxis alaskensis RB2256 putative FecR protein YP_617570.1 2665555 D 317655 CDS YP_617571.1 103488010 4081505 2666644..2669175 1 NC_008048.1 TonB-dependent receptor 2669175 4081505 Sala_2531 Sphingopyxis alaskensis RB2256 TonB-dependent receptor YP_617571.1 2666644 D 317655 CDS YP_617572.1 103488011 4081506 2669187..2671367 1 NC_008048.1 dipeptidyl aminopeptidases/acylaminoacyl-peptidases-like protein 2671367 4081506 Sala_2532 Sphingopyxis alaskensis RB2256 dipeptidyl aminopeptidases/acylaminoacyl-peptidases-like protein YP_617572.1 2669187 D 317655 CDS YP_617573.1 103488012 4081507 complement(2671577..2673289) 1 NC_008048.1 asparagine synthase 2673289 4081507 Sala_2533 Sphingopyxis alaskensis RB2256 asparagine synthase YP_617573.1 2671577 R 317655 CDS YP_617574.1 103488013 4081508 complement(2673289..2673951) 1 NC_008048.1 hypothetical protein 2673951 4081508 Sala_2534 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617574.1 2673289 R 317655 CDS YP_617575.1 103488014 4081509 2674866..2676257 1 NC_008048.1 phage integrase 2676257 4081509 Sala_2535 Sphingopyxis alaskensis RB2256 phage integrase YP_617575.1 2674866 D 317655 CDS YP_617576.1 103488015 4081511 complement(2677602..2678345) 1 NC_008048.1 NADPH-dependent FMN reductase 2678345 4081511 Sala_2537 Sphingopyxis alaskensis RB2256 NADPH-dependent FMN reductase YP_617576.1 2677602 R 317655 CDS YP_617577.1 103488016 4081512 complement(2678373..2679464) 1 NC_008048.1 bile acid:sodium symporter 2679464 4081512 Sala_2538 Sphingopyxis alaskensis RB2256 bile acid:sodium symporter YP_617577.1 2678373 R 317655 CDS YP_617578.1 103488017 4081513 complement(2679461..2679892) 1 NC_008048.1 arsenate reductase 2679892 4081513 Sala_2539 Sphingopyxis alaskensis RB2256 arsenate reductase YP_617578.1 2679461 R 317655 CDS YP_617579.1 103488018 4081514 complement(2679889..2680428) 1 NC_008048.1 protein tyrosine phosphatase 2680428 4081514 Sala_2540 Sphingopyxis alaskensis RB2256 protein tyrosine phosphatase YP_617579.1 2679889 R 317655 CDS YP_617580.1 103488019 4081456 complement(2680425..2680778) 1 NC_008048.1 ArsR family transcriptional regulator 2680778 4081456 Sala_2541 Sphingopyxis alaskensis RB2256 ArsR family transcriptional regulator YP_617580.1 2680425 R 317655 CDS YP_617581.1 103488020 4081457 complement(2681319..2681639) 1 NC_008048.1 hypothetical protein 2681639 4081457 Sala_2542 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617581.1 2681319 R 317655 CDS YP_617582.1 103488021 4081458 complement(2681659..2682045) 1 NC_008048.1 MerR family transcriptional regulator 2682045 4081458 Sala_2543 Sphingopyxis alaskensis RB2256 MerR family transcriptional regulator YP_617582.1 2681659 R 317655 CDS YP_617583.1 103488022 4081459 complement(2682042..2684405) 1 NC_008048.1 heavy metal translocating P-type ATPase 2684405 4081459 Sala_2544 Sphingopyxis alaskensis RB2256 heavy metal translocating P-type ATPase YP_617583.1 2682042 R 317655 CDS YP_617584.1 103488023 4081460 2684575..2685075 1 NC_008048.1 hypothetical protein 2685075 4081460 Sala_2545 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617584.1 2684575 D 317655 CDS YP_617585.1 103488024 4081461 2685117..2685479 1 NC_008048.1 hypothetical protein 2685479 4081461 Sala_2546 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617585.1 2685117 D 317655 CDS YP_617586.1 103488025 4081462 2685583..2685858 1 NC_008048.1 hypothetical protein 2685858 4081462 Sala_2547 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617586.1 2685583 D 317655 CDS YP_617587.1 103488026 4081463 2685998..2687224 1 NC_008048.1 outer membrane efflux protein 2687224 4081463 Sala_2548 Sphingopyxis alaskensis RB2256 outer membrane efflux protein YP_617587.1 2685998 D 317655 CDS YP_617588.1 103488027 4081464 2687221..2688693 1 NC_008048.1 secretion protein HlyD 2688693 4081464 Sala_2549 Sphingopyxis alaskensis RB2256 secretion protein HlyD YP_617588.1 2687221 D 317655 CDS YP_617589.1 103488028 4081465 2688690..2691833 1 NC_008048.1 heavy metal efflux pump CzcA 2691833 4081465 Sala_2550 Sphingopyxis alaskensis RB2256 heavy metal efflux pump CzcA YP_617589.1 2688690 D 317655 CDS YP_617590.1 103488029 4081466 2691845..2692255 1 NC_008048.1 hypothetical protein 2692255 4081466 Sala_2551 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617590.1 2691845 D 317655 CDS YP_617591.1 103488030 4081467 complement(2692390..2692722) 1 NC_008048.1 hypothetical protein 2692722 4081467 Sala_2552 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617591.1 2692390 R 317655 CDS YP_617592.1 103488031 4081468 complement(2692826..2693254) 1 NC_008048.1 hypothetical protein 2693254 4081468 Sala_2553 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617592.1 2692826 R 317655 CDS YP_617593.1 103488032 4081469 2693565..2693768 1 NC_008048.1 hypothetical protein 2693768 4081469 Sala_2554 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617593.1 2693565 D 317655 CDS YP_617594.1 103488033 4081470 2693795..2696383 1 NC_008048.1 vitamin K epoxide reductase 2696383 4081470 Sala_2555 Sphingopyxis alaskensis RB2256 vitamin K epoxide reductase YP_617594.1 2693795 D 317655 CDS YP_617595.1 103488034 4081471 2696453..2697739 1 NC_008048.1 fatty acid alpha hydroxylase, cytochrome P450 2697739 4081471 Sala_2556 Sphingopyxis alaskensis RB2256 fatty acid alpha hydroxylase, cytochrome P450 YP_617595.1 2696453 D 317655 CDS YP_617596.1 103488035 4081472 complement(2697807..2698352) 1 NC_008048.1 hypothetical protein 2698352 4081472 Sala_2557 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617596.1 2697807 R 317655 CDS YP_617597.1 103488036 4081473 complement(2698368..2698787) 1 NC_008048.1 MerR family transcriptional regulator 2698787 4081473 Sala_2558 Sphingopyxis alaskensis RB2256 MerR family transcriptional regulator YP_617597.1 2698368 R 317655 CDS YP_617598.1 103488037 4081474 2698830..2699516 1 NC_008048.1 type 11 methyltransferase 2699516 4081474 Sala_2559 Sphingopyxis alaskensis RB2256 type 11 methyltransferase YP_617598.1 2698830 D 317655 CDS YP_617599.1 103488038 4081475 2699576..2700220 1 NC_008048.1 hypothetical protein 2700220 4081475 Sala_2560 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617599.1 2699576 D 317655 CDS YP_617600.1 103488039 4081594 2700238..2702181 1 NC_008048.1 iron permease FTR1 2702181 4081594 Sala_2561 Sphingopyxis alaskensis RB2256 iron permease FTR1 YP_617600.1 2700238 D 317655 CDS YP_617601.1 103488040 4081595 complement(2702209..2702616) 1 NC_008048.1 MerR family transcriptional regulator 2702616 4081595 Sala_2562 Sphingopyxis alaskensis RB2256 MerR family transcriptional regulator YP_617601.1 2702209 R 317655 CDS YP_617602.1 103488041 4081596 2702699..2703064 1 NC_008048.1 mercuric ion transport protein, MerT 2703064 4081596 Sala_2563 Sphingopyxis alaskensis RB2256 mercuric ion transport protein, MerT YP_617602.1 2702699 D 317655 CDS YP_617603.1 103488042 4081597 complement(2703483..2704052) 1 NC_008048.1 universal stress protein, UspA 2704052 4081597 Sala_2564 Sphingopyxis alaskensis RB2256 universal stress protein, UspA YP_617603.1 2703483 R 317655 CDS YP_617604.1 103488043 4081598 2704061..2704393 1 NC_008048.1 hypothetical protein 2704393 4081598 Sala_2565 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617604.1 2704061 D 317655 CDS YP_617605.1 103488044 4081599 2704556..2704936 1 NC_008048.1 hypothetical protein 2704936 4081599 Sala_2566 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617605.1 2704556 D 317655 CDS YP_617606.1 103488045 4081600 2704996..2706297 1 NC_008048.1 outer membrane efflux protein 2706297 4081600 Sala_2567 Sphingopyxis alaskensis RB2256 outer membrane efflux protein YP_617606.1 2704996 D 317655 CDS YP_617607.1 103488046 4081601 2706300..2707469 1 NC_008048.1 secretion protein HlyD 2707469 4081601 Sala_2568 Sphingopyxis alaskensis RB2256 secretion protein HlyD YP_617607.1 2706300 D 317655 CDS YP_617608.1 103488047 4081602 2707471..2710707 1 NC_008048.1 heavy metal efflux pump CzcA 2710707 4081602 Sala_2569 Sphingopyxis alaskensis RB2256 heavy metal efflux pump CzcA YP_617608.1 2707471 D 317655 CDS YP_617609.1 103488048 4081603 2710933..2711856 1 NC_008048.1 hypothetical protein 2711856 4081603 Sala_2570 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617609.1 2710933 D 317655 CDS YP_617610.1 103488049 4081604 complement(2711883..2712626) 1 NC_008048.1 HAD family hydrolase 2712626 4081604 Sala_2571 Sphingopyxis alaskensis RB2256 HAD family hydrolase YP_617610.1 2711883 R 317655 CDS YP_617611.1 103488050 4081605 complement(2712672..2713097) 1 NC_008048.1 MerR family transcriptional regulator 2713097 4081605 Sala_2572 Sphingopyxis alaskensis RB2256 MerR family transcriptional regulator YP_617611.1 2712672 R 317655 CDS YP_617612.1 103488051 4081606 2713165..2713815 1 NC_008048.1 cation efflux protein 2713815 4081606 Sala_2573 Sphingopyxis alaskensis RB2256 cation efflux protein YP_617612.1 2713165 D 317655 CDS YP_617613.1 103488052 4081607 complement(2713981..2714784) 1 NC_008048.1 hypothetical protein 2714784 4081607 Sala_2574 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617613.1 2713981 R 317655 CDS YP_617614.1 103488053 4081608 complement(2715028..2715654) 1 NC_008048.1 cation efflux protein 2715654 4081608 Sala_2575 Sphingopyxis alaskensis RB2256 cation efflux protein YP_617614.1 2715028 R 317655 CDS YP_617615.1 103488054 4081609 2716403..2716738 1 NC_008048.1 hypothetical protein 2716738 4081609 Sala_2576 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617615.1 2716403 D 317655 CDS YP_617616.1 103488055 4081610 2716802..2718109 1 NC_008048.1 outer membrane efflux protein 2718109 4081610 Sala_2577 Sphingopyxis alaskensis RB2256 outer membrane efflux protein YP_617616.1 2716802 D 317655 CDS YP_617617.1 103488056 4081611 2718261..2719418 1 NC_008048.1 secretion protein HlyD 2719418 4081611 Sala_2578 Sphingopyxis alaskensis RB2256 secretion protein HlyD YP_617617.1 2718261 D 317655 CDS YP_617618.1 103488057 4081612 2719422..2722667 1 NC_008048.1 heavy metal efflux pump CzcA 2722667 4081612 Sala_2579 Sphingopyxis alaskensis RB2256 heavy metal efflux pump CzcA YP_617618.1 2719422 D 317655 CDS YP_617619.1 103488058 4081633 2722679..2723023 1 NC_008048.1 hypothetical protein 2723023 4081633 Sala_2580 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617619.1 2722679 D 317655 CDS YP_617620.1 103488059 4081634 2723156..2723623 1 NC_008048.1 hypothetical protein 2723623 4081634 Sala_2581 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617620.1 2723156 D 317655 CDS YP_617621.1 103488060 4081635 2723815..2726307 1 NC_008048.1 heavy metal translocating P-type ATPase 2726307 4081635 Sala_2582 Sphingopyxis alaskensis RB2256 heavy metal translocating P-type ATPase YP_617621.1 2723815 D 317655 CDS YP_617622.1 103488061 4081636 2726304..2727797 1 NC_008048.1 Type I secretion outer membrane protein, TolC 2727797 4081636 Sala_2583 Sphingopyxis alaskensis RB2256 Type I secretion outer membrane protein, TolC YP_617622.1 2726304 D 317655 CDS YP_617623.1 103488062 4081637 2728043..2728981 1 NC_008048.1 cation diffusion facilitator family transporter 2728981 4081637 Sala_2584 Sphingopyxis alaskensis RB2256 cation diffusion facilitator family transporter YP_617623.1 2728043 D 317655 CDS YP_617624.1 103488063 4081638 2729044..2729340 1 NC_008048.1 hypothetical protein 2729340 4081638 Sala_2585 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617624.1 2729044 D 317655 CDS YP_617625.1 103488064 4081639 2729377..2729862 1 NC_008048.1 hypothetical protein 2729862 4081639 Sala_2586 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617625.1 2729377 D 317655 CDS YP_617626.1 103488065 4081640 2729875..2730453 1 NC_008048.1 hypothetical protein 2730453 4081640 Sala_2587 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617626.1 2729875 D 317655 CDS YP_617627.1 103488066 4081641 2731109..2731861 1 NC_008048.1 LuxR family transcriptional regulator 2731861 4081641 Sala_2588 Sphingopyxis alaskensis RB2256 LuxR family transcriptional regulator YP_617627.1 2731109 D 317655 CDS YP_617628.1 103488067 4081642 2731970..2732596 1 NC_008048.1 autoinducer synthesis protein 2732596 4081642 Sala_2589 Sphingopyxis alaskensis RB2256 autoinducer synthesis protein YP_617628.1 2731970 D 317655 CDS YP_617629.1 103488068 4081643 2732593..2733468 1 NC_008048.1 phytanoyl-CoA dioxygenase 2733468 4081643 Sala_2590 Sphingopyxis alaskensis RB2256 phytanoyl-CoA dioxygenase YP_617629.1 2732593 D 317655 CDS YP_617630.1 103488069 4081644 2733473..2734087 1 NC_008048.1 GntR family transcriptional regulator 2734087 4081644 Sala_2591 Sphingopyxis alaskensis RB2256 GntR family transcriptional regulator YP_617630.1 2733473 D 317655 CDS YP_617631.1 103488070 4081645 2734080..2734379 1 NC_008048.1 hypothetical protein 2734379 4081645 Sala_2592 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617631.1 2734080 D 317655 CDS YP_617632.1 103488071 4081646 complement(2734387..2734776) 1 NC_008048.1 PilT protein-like protein 2734776 4081646 Sala_2593 Sphingopyxis alaskensis RB2256 PilT protein-like protein YP_617632.1 2734387 R 317655 CDS YP_617633.1 103488072 4081647 complement(2734773..2735018) 1 NC_008048.1 AbrB family transcriptional regulator 2735018 4081647 Sala_2594 Sphingopyxis alaskensis RB2256 AbrB family transcriptional regulator YP_617633.1 2734773 R 317655 CDS YP_617634.1 103488073 4081648 2735177..2736109 1 NC_008048.1 similar to SMa10599; hypothetical protein 2736109 4081648 Sala_2595 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617634.1 2735177 D 317655 CDS YP_617635.1 103488074 4081649 2736394..2736627 1 NC_008048.1 SpoVT/AbrB-like protein 2736627 4081649 Sala_2596 Sphingopyxis alaskensis RB2256 SpoVT/AbrB-like protein YP_617635.1 2736394 D 317655 CDS YP_617636.1 103488075 4081650 2736631..2737032 1 NC_008048.1 PilT protein-like protein 2737032 4081650 Sala_2597 Sphingopyxis alaskensis RB2256 PilT protein-like protein YP_617636.1 2736631 D 317655 CDS YP_617637.1 103488076 4081651 2737321..2737926 1 NC_008048.1 ECF subfamily RNA polymerase sigma-24 factor 2737926 4081651 Sala_2598 Sphingopyxis alaskensis RB2256 ECF subfamily RNA polymerase sigma-24 factor YP_617637.1 2737321 D 317655 CDS YP_617638.1 103488077 4081652 2737923..2739020 1 NC_008048.1 putative FecR protein 2739020 4081652 Sala_2599 Sphingopyxis alaskensis RB2256 putative FecR protein YP_617638.1 2737923 D 317655 CDS YP_617639.1 103488078 4081653 2739135..2741705 1 NC_008048.1 TonB-dependent receptor 2741705 4081653 Sala_2600 Sphingopyxis alaskensis RB2256 TonB-dependent receptor YP_617639.1 2739135 D 317655 CDS YP_617640.1 103488079 4081654 2741705..2743831 1 NC_008048.1 dipeptidyl aminopeptidases/acylaminoacyl-peptidases-like protein 2743831 4081654 Sala_2601 Sphingopyxis alaskensis RB2256 dipeptidyl aminopeptidases/acylaminoacyl-peptidases-like protein YP_617640.1 2741705 D 317655 CDS YP_617641.1 103488080 4081655 complement(2743790..2745553) 1 NC_008048.1 asparagine synthase 2745553 4081655 Sala_2602 Sphingopyxis alaskensis RB2256 asparagine synthase YP_617641.1 2743790 R 317655 CDS YP_617642.1 103488081 4081656 complement(2745550..2746209) 1 NC_008048.1 hypothetical protein 2746209 4081656 Sala_2603 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617642.1 2745550 R 317655 CDS YP_617643.1 103488082 4081657 complement(2746688..2746924) 1 NC_008048.1 hypothetical protein 2746924 4081657 Sala_2604 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617643.1 2746688 R 317655 CDS YP_617644.1 103488083 4081658 complement(2746924..2748216) 1 NC_008048.1 conjugation TrbI-like protein 2748216 4081658 Sala_2605 Sphingopyxis alaskensis RB2256 conjugation TrbI-like protein YP_617644.1 2746924 R 317655 CDS YP_617645.1 103488084 4081659 complement(2748213..2749226) 1 NC_008048.1 conjugal transfer protein TrbG/VirB9/CagX 2749226 4081659 Sala_2606 Sphingopyxis alaskensis RB2256 conjugal transfer protein TrbG/VirB9/CagX YP_617645.1 2748213 R 317655 CDS YP_617646.1 103488085 4081660 complement(2749223..2749906) 1 NC_008048.1 conjugal transfer protein TrbF 2749906 4081660 Sala_2607 Sphingopyxis alaskensis RB2256 conjugal transfer protein TrbF YP_617646.1 2749223 R 317655 CDS YP_617647.1 103488086 4081661 complement(2749925..2751298) 1 NC_008048.1 type IV secretion VirB6 family; conjugal transfer protein TrbL 2751298 4081661 Sala_2608 Sphingopyxis alaskensis RB2256 conjugal transfer protein TrbL YP_617647.1 2749925 R 317655 CDS YP_617648.1 103488087 4081662 complement(2751295..2751543) 1 NC_008048.1 hypothetical protein 2751543 4081662 Sala_2609 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617648.1 2751295 R 317655 CDS YP_617649.1 103488088 4081663 complement(2751545..2752267) 1 NC_008048.1 conjugal transfer protein TrbJ 2752267 4081663 Sala_2610 Sphingopyxis alaskensis RB2256 conjugal transfer protein TrbJ YP_617649.1 2751545 R 317655 CDS YP_617650.1 103488089 4081664 complement(2752264..2754753) 1 NC_008048.1 type IV secretion system VirB4 family; conjugal transfer ATPase TrbE 2754753 4081664 Sala_2611 Sphingopyxis alaskensis RB2256 conjugal transfer ATPase TrbE YP_617650.1 2752264 R 317655 CDS YP_617651.1 103488090 4081665 complement(2754750..2755019) 1 NC_008048.1 putative conjugal transfer protein 2755019 4081665 Sala_2612 Sphingopyxis alaskensis RB2256 putative conjugal transfer protein YP_617651.1 2754750 R 317655 CDS YP_617652.1 103488091 4081666 complement(2755019..2755363) 1 NC_008048.1 conjugal transfer protein TrbC 2755363 4081666 Sala_2613 Sphingopyxis alaskensis RB2256 conjugal transfer protein TrbC YP_617652.1 2755019 R 317655 CDS YP_617653.1 103488092 4081667 complement(2755360..2756343) 1 NC_008048.1 type II secretion system protein E 2756343 4081667 Sala_2614 Sphingopyxis alaskensis RB2256 type II secretion system protein E YP_617653.1 2755360 R 317655 CDS YP_617654.1 103488093 4081668 complement(2756368..2756685) 1 NC_008048.1 hypothetical protein 2756685 4081668 Sala_2615 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617654.1 2756368 R 317655 CDS YP_617655.1 103488094 4081669 2756756..2757862 1 NC_008048.1 filamentation induced by cAMP protein fic 2757862 4081669 Sala_2616 Sphingopyxis alaskensis RB2256 filamentation induced by cAMP protein fic YP_617655.1 2756756 D 317655 CDS YP_617656.1 103488095 4081670 complement(2757835..2758287) 1 NC_008048.1 hypothetical protein 2758287 4081670 Sala_2617 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617656.1 2757835 R 317655 CDS YP_617657.1 103488096 4081671 complement(2758284..2760347) 1 NC_008048.1 type IV secretion VirD4 coupling protein family; conjugal transfer coupling protein TraG 2760347 4081671 Sala_2618 Sphingopyxis alaskensis RB2256 conjugal transfer coupling protein TraG YP_617657.1 2758284 R 317655 CDS YP_617658.1 103488097 4081574 complement(2760382..2762127) 1 NC_008048.1 hypothetical protein 2762127 4081574 Sala_2619 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617658.1 2760382 R 317655 CDS YP_617659.1 103488098 4081575 complement(2762372..2763160) 1 NC_008048.1 lytic transglycosylase, catalytic 2763160 4081575 Sala_2620 Sphingopyxis alaskensis RB2256 lytic transglycosylase, catalytic YP_617659.1 2762372 R 317655 CDS YP_617660.1 103488099 4081576 complement(2763164..2763508) 1 NC_008048.1 hypothetical protein 2763508 4081576 Sala_2621 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617660.1 2763164 R 317655 CDS YP_617661.1 103488100 4081577 complement(2763499..2764098) 1 NC_008048.1 conjugal transfer protein traF 2764098 4081577 Sala_2622 Sphingopyxis alaskensis RB2256 conjugal transfer protein traF YP_617661.1 2763499 R 317655 CDS YP_617662.1 103488101 4081578 complement(2764095..2764613) 1 NC_008048.1 hypothetical protein 2764613 4081578 Sala_2623 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617662.1 2764095 R 317655 CDS YP_617663.1 103488102 4081579 complement(2764891..2765775) 1 NC_008048.1 putative replication protein A 2765775 4081579 Sala_2624 Sphingopyxis alaskensis RB2256 putative replication protein A YP_617663.1 2764891 R 317655 CDS YP_617664.1 103488103 4081580 complement(2765780..2766040) 1 NC_008048.1 hypothetical protein 2766040 4081580 Sala_2625 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617664.1 2765780 R 317655 CDS YP_617665.1 103488104 4081581 complement(2766168..2766512) 1 NC_008048.1 hypothetical protein 2766512 4081581 Sala_2626 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617665.1 2766168 R 317655 CDS YP_617666.1 103488105 4081582 2766607..2767050 1 NC_008048.1 hypothetical protein 2767050 4081582 Sala_2627 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617666.1 2766607 D 317655 CDS YP_617667.1 103488106 4081583 complement(2767074..2767391) 1 NC_008048.1 hypothetical protein 2767391 4081583 Sala_2628 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617667.1 2767074 R 317655 CDS YP_617668.1 103488107 4081584 2767636..2767893 1 NC_008048.1 hypothetical protein 2767893 4081584 Sala_2629 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617668.1 2767636 D 317655 CDS YP_617669.1 103488108 4081585 complement(2767976..2768428) 1 NC_008048.1 hypothetical protein 2768428 4081585 Sala_2630 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617669.1 2767976 R 317655 CDS YP_617670.1 103488109 4081586 complement(2768573..2768737) 1 NC_008048.1 hypothetical protein 2768737 4081586 Sala_2631 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617670.1 2768573 R 317655 CDS YP_617671.1 103488110 4081587 2769166..2769441 1 NC_008048.1 histone-like DNA-binding protein 2769441 4081587 Sala_2632 Sphingopyxis alaskensis RB2256 histone-like DNA-binding protein YP_617671.1 2769166 D 317655 CDS YP_617672.1 103488111 4081588 complement(2769535..2769855) 1 NC_008048.1 hypothetical protein 2769855 4081588 Sala_2633 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617672.1 2769535 R 317655 CDS YP_617673.1 103488112 4081589 complement(2770462..2772600) 1 NC_008048.1 hypothetical protein 2772600 4081589 Sala_2635 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617673.1 2770462 R 317655 CDS YP_617674.1 103488113 4081590 complement(2772597..2773124) 1 NC_008048.1 hypothetical protein 2773124 4081590 Sala_2636 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617674.1 2772597 R 317655 CDS YP_617675.1 103488114 4081591 complement(2773124..2777710) 1 NC_008048.1 helicase-like protein 2777710 4081591 Sala_2637 Sphingopyxis alaskensis RB2256 helicase-like protein YP_617675.1 2773124 R 317655 CDS YP_617676.1 103488115 4081592 complement(2777719..2778432) 1 NC_008048.1 hypothetical protein 2778432 4081592 Sala_2638 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617676.1 2777719 R 317655 CDS YP_617677.1 103488116 4081593 complement(2778422..2781463) 1 NC_008048.1 hypothetical protein 2781463 4081593 Sala_2639 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617677.1 2778422 R 317655 CDS YP_617678.1 103488117 4081770 complement(2781460..2782377) 1 NC_008048.1 hypothetical protein 2782377 4081770 Sala_2640 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617678.1 2781460 R 317655 CDS YP_617679.1 103488118 4081771 complement(2782374..2784869) 1 NC_008048.1 helicase-like protein 2784869 4081771 Sala_2641 Sphingopyxis alaskensis RB2256 helicase-like protein YP_617679.1 2782374 R 317655 CDS YP_617680.1 103488119 4081772 complement(2784862..2787996) 1 NC_008048.1 type III restriction enzyme, res subunit 2787996 4081772 Sala_2642 Sphingopyxis alaskensis RB2256 type III restriction enzyme, res subunit YP_617680.1 2784862 R 317655 CDS YP_617681.1 103488120 4081773 complement(2788101..2788811) 1 NC_008048.1 ExsB protein 2788811 4081773 Sala_2643 Sphingopyxis alaskensis RB2256 ExsB protein YP_617681.1 2788101 R 317655 CDS YP_617682.1 103488121 4081774 complement(2788808..2789182) 1 NC_008048.1 putative 6-pyruvoyl tetrahydropterin synthase 2789182 4081774 Sala_2644 Sphingopyxis alaskensis RB2256 putative 6-pyruvoyl tetrahydropterin synthase YP_617682.1 2788808 R 317655 CDS YP_617683.1 103488122 4081775 complement(2789182..2789814) 1 NC_008048.1 hypothetical protein 2789814 4081775 Sala_2645 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617683.1 2789182 R 317655 CDS YP_617684.1 103488123 4081776 complement(2789811..2790854) 1 NC_008048.1 hypothetical protein 2790854 4081776 Sala_2646 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617684.1 2789811 R 317655 CDS YP_617685.1 103488124 4081777 complement(2790862..2792193) 1 NC_008048.1 hypothetical protein 2792193 4081777 Sala_2647 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617685.1 2790862 R 317655 CDS YP_617686.1 103488125 4081778 complement(2792190..2793311) 1 NC_008048.1 hypothetical protein 2793311 4081778 Sala_2648 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617686.1 2792190 R 317655 CDS YP_617687.1 103488126 4081779 complement(2793308..2794231) 1 NC_008048.1 hypothetical protein 2794231 4081779 Sala_2649 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617687.1 2793308 R 317655 CDS YP_617688.1 103488127 4081780 complement(2794602..2795534) 1 NC_008048.1 hypothetical protein 2795534 4081780 Sala_2650 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617688.1 2794602 R 317655 CDS YP_617689.1 103488128 4081781 complement(2795849..2796895) 1 NC_008048.1 hypothetical protein 2796895 4081781 Sala_2651 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617689.1 2795849 R 317655 CDS YP_617690.1 103488129 4081782 complement(2796907..2801097) 1 NC_008048.1 methylase/helicase 2801097 4081782 Sala_2652 Sphingopyxis alaskensis RB2256 methylase/helicase YP_617690.1 2796907 R 317655 CDS YP_617691.1 103488130 4081783 2801727..2802506 1 NC_008048.1 hypothetical protein 2802506 4081783 Sala_2653 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617691.1 2801727 D 317655 CDS YP_617692.1 103488131 4081784 complement(2802544..2802759) 1 NC_008048.1 hypothetical protein 2802759 4081784 Sala_2654 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617692.1 2802544 R 317655 CDS YP_617693.1 103488132 4081785 complement(2802746..2803267) 1 NC_008048.1 hypothetical protein 2803267 4081785 Sala_2655 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617693.1 2802746 R 317655 CDS YP_617694.1 103488133 4081786 complement(2803348..2803713) 1 NC_008048.1 hypothetical protein 2803713 4081786 Sala_2656 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617694.1 2803348 R 317655 CDS YP_617695.1 103488134 4081787 complement(2803724..2804191) 1 NC_008048.1 hypothetical protein 2804191 4081787 Sala_2657 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617695.1 2803724 R 317655 CDS YP_617696.1 103488135 4081788 complement(2804276..2804596) 1 NC_008048.1 hypothetical protein 2804596 4081788 Sala_2658 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617696.1 2804276 R 317655 CDS YP_617697.1 103488136 4081866 complement(2804571..2806712) 1 NC_008048.1 hypothetical protein 2806712 4081866 Sala_2659 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617697.1 2804571 R 317655 CDS YP_617698.1 103488137 4081867 2806724..2807086 1 NC_008048.1 hypothetical protein 2807086 4081867 Sala_2660 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617698.1 2806724 D 317655 CDS YP_617699.1 103488138 4081868 2807396..2807653 1 NC_008048.1 hypothetical protein 2807653 4081868 Sala_2661 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617699.1 2807396 D 317655 CDS YP_617700.1 103488139 4081869 2807655..2807969 1 NC_008048.1 plasmid stabilization system protein 2807969 4081869 Sala_2662 Sphingopyxis alaskensis RB2256 plasmid stabilization system protein YP_617700.1 2807655 D 317655 CDS YP_617701.1 103488140 4081870 complement(2807992..2808399) 1 NC_008048.1 hypothetical protein 2808399 4081870 Sala_2663 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617701.1 2807992 R 317655 CDS YP_617702.1 103488141 4081871 complement(2808396..2809298) 1 NC_008048.1 replication primase 2809298 4081871 Sala_2664 Sphingopyxis alaskensis RB2256 replication primase YP_617702.1 2808396 R 317655 CDS YP_617703.1 103488142 4081873 2809881..2810792 1 NC_008048.1 thioredoxin-like protein 2810792 4081873 Sala_2665 Sphingopyxis alaskensis RB2256 thioredoxin-like protein YP_617703.1 2809881 D 317655 CDS YP_617704.1 103488143 4081874 2810792..2811442 1 NC_008048.1 peptidase S16, lon-like protein 2811442 4081874 Sala_2666 Sphingopyxis alaskensis RB2256 peptidase S16, lon-like protein YP_617704.1 2810792 D 317655 CDS YP_617705.1 103488144 4081875 complement(2811450..2812139) 1 NC_008048.1 sigma-70 region 2 2812139 4081875 Sala_2667 Sphingopyxis alaskensis RB2256 sigma-70 region 2 YP_617705.1 2811450 R 317655 CDS YP_617706.1 103488145 4081876 complement(2812292..2813533) 1 NC_008048.1 UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase 2813533 4081876 Sala_2668 Sphingopyxis alaskensis RB2256 UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase YP_617706.1 2812292 R 317655 CDS YP_617707.1 103488146 4081877 2813594..2815972 1 NC_008048.1 cell division protein FtsK 2815972 4081877 Sala_2669 Sphingopyxis alaskensis RB2256 cell division protein FtsK YP_617707.1 2813594 D 317655 CDS YP_617708.1 103488147 4081878 2816158..2816778 1 NC_008048.1 outer membrane lipoprotein carrier protein LolA 2816778 4081878 Sala_2670 Sphingopyxis alaskensis RB2256 outer membrane lipoprotein carrier protein LolA YP_617708.1 2816158 D 317655 CDS YP_617709.1 103488148 4081879 2817401..2818195 1 NC_008048.1 exodeoxyribonuclease III (xth) 2818195 4081879 Sala_2671 Sphingopyxis alaskensis RB2256 exodeoxyribonuclease III (xth) YP_617709.1 2817401 D 317655 CDS YP_617710.1 103488149 4081880 2818357..2819259 1 NC_008048.1 GTP cyclohydrolase II 2819259 4081880 Sala_2672 Sphingopyxis alaskensis RB2256 GTP cyclohydrolase II YP_617710.1 2818357 D 317655 CDS YP_617711.1 103488150 4081881 complement(2819348..2820154) 1 NC_008048.1 response regulator receiver protein 2820154 4081881 Sala_2673 Sphingopyxis alaskensis RB2256 response regulator receiver protein YP_617711.1 2819348 R 317655 CDS YP_617712.1 103488151 4081882 complement(2820151..2821275) 1 NC_008048.1 signal transduction histidine kinase LytS 2821275 4081882 Sala_2674 Sphingopyxis alaskensis RB2256 signal transduction histidine kinase LytS YP_617712.1 2820151 R 317655 CDS YP_617713.1 103488152 4081883 complement(2821340..2821858) 1 NC_008048.1 HxlR family transcriptional regulator 2821858 4081883 Sala_2675 Sphingopyxis alaskensis RB2256 HxlR family transcriptional regulator YP_617713.1 2821340 R 317655 CDS YP_617714.1 103488153 4081884 complement(2821944..2822828) 1 NC_008048.1 glycosyl transferase family protein 2822828 4081884 Sala_2676 Sphingopyxis alaskensis RB2256 glycosyl transferase family protein YP_617714.1 2821944 R 317655 CDS YP_617715.1 103488154 4081828 2822946..2825048 1 NC_008048.1 (p)ppGpp synthetase I SpoT/RelA 2825048 4081828 Sala_2677 Sphingopyxis alaskensis RB2256 (p)ppGpp synthetase I SpoT/RelA YP_617715.1 2822946 D 317655 CDS YP_617716.1 103488155 4081829 2825279..2825533 1 NC_008048.1 hypothetical protein 2825533 4081829 Sala_2678 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617716.1 2825279 D 317655 CDS YP_617717.1 103488156 4081830 2825537..2826007 1 NC_008048.1 DoxX protein 2826007 4081830 Sala_2679 Sphingopyxis alaskensis RB2256 DoxX protein YP_617717.1 2825537 D 317655 CDS YP_617718.1 103488157 4081831 2826004..2826528 1 NC_008048.1 ECF subfamily RNA polymerase sigma-24 factor 2826528 4081831 Sala_2680 Sphingopyxis alaskensis RB2256 ECF subfamily RNA polymerase sigma-24 factor YP_617718.1 2826004 D 317655 CDS YP_617719.1 103488158 4081832 2826533..2827177 1 NC_008048.1 hypothetical protein 2827177 4081832 Sala_2681 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617719.1 2826533 D 317655 CDS YP_617720.1 103488159 4081833 2827254..2827637 1 NC_008048.1 hypothetical protein 2827637 4081833 Sala_2682 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617720.1 2827254 D 317655 CDS YP_617721.1 103488160 4081834 complement(2827775..2829202) 1 NC_008048.1 mercuric reductase MerA 2829202 4081834 Sala_2683 Sphingopyxis alaskensis RB2256 mercuric reductase MerA YP_617721.1 2827775 R 317655 CDS YP_617722.1 103488161 4081835 complement(2829245..2829574) 1 NC_008048.1 heavy metal transport/detoxification protein 2829574 4081835 Sala_2684 Sphingopyxis alaskensis RB2256 heavy metal transport/detoxification protein YP_617722.1 2829245 R 317655 CDS YP_617723.1 103488162 4081836 complement(2829586..2829984) 1 NC_008048.1 mercuric transporter MerT 2829984 4081836 Sala_2685 Sphingopyxis alaskensis RB2256 mercuric transporter MerT YP_617723.1 2829586 R 317655 CDS YP_617724.1 103488163 4081837 2830060..2830578 1 NC_008048.1 MerR family transcriptional regulator 2830578 4081837 Sala_2686 Sphingopyxis alaskensis RB2256 MerR family transcriptional regulator YP_617724.1 2830060 D 317655 CDS YP_617725.1 103488164 4081838 complement(2830502..2831257) 1 NC_008048.1 hypothetical protein 2831257 4081838 Sala_2687 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617725.1 2830502 R 317655 CDS YP_617726.1 103488165 4081839 complement(2831261..2831716) 1 NC_008048.1 hypothetical protein 2831716 4081839 Sala_2688 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617726.1 2831261 R 317655 CDS YP_617727.1 103488166 4081840 complement(2831868..2832518) 1 NC_008048.1 hypothetical protein 2832518 4081840 Sala_2689 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617727.1 2831868 R 317655 CDS YP_617728.1 103488167 4081841 2832574..2833362 1 NC_008048.1 hypothetical protein 2833362 4081841 Sala_2690 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617728.1 2832574 D 317655 CDS YP_617729.1 103488168 4081842 2833594..2834298 1 NC_008048.1 hypothetical protein 2834298 4081842 Sala_2691 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617729.1 2833594 D 317655 CDS YP_617730.1 103488169 4081843 2834379..2834960 1 NC_008048.1 TetR family transcriptional regulator 2834960 4081843 Sala_2692 Sphingopyxis alaskensis RB2256 TetR family transcriptional regulator YP_617730.1 2834379 D 317655 CDS YP_617731.1 103488170 4081844 2835017..2835244 1 NC_008048.1 4-oxalocrotonate tautomerase 2835244 4081844 Sala_2693 Sphingopyxis alaskensis RB2256 4-oxalocrotonate tautomerase YP_617731.1 2835017 D 317655 CDS YP_617732.1 103488171 4081845 2835270..2835845 1 NC_008048.1 alkylhydroperoxidase AhpD core 2835845 4081845 Sala_2694 Sphingopyxis alaskensis RB2256 alkylhydroperoxidase AhpD core YP_617732.1 2835270 D 317655 CDS YP_617733.1 103488172 4081846 complement(2836263..2836871) 1 NC_008048.1 peroxidase-like protein 2836871 4081846 Sala_2695 Sphingopyxis alaskensis RB2256 peroxidase-like protein YP_617733.1 2836263 R 317655 CDS YP_617734.1 103488173 4081905 complement(2836881..2837483) 1 NC_008048.1 CDP-alcohol phosphatidyltransferase 2837483 4081905 Sala_2696 Sphingopyxis alaskensis RB2256 CDP-alcohol phosphatidyltransferase YP_617734.1 2836881 R 317655 CDS YP_617735.1 103488174 4081906 complement(2837488..2838753) 1 NC_008048.1 Na+ dependent nucleoside transporter-like protein 2838753 4081906 Sala_2697 Sphingopyxis alaskensis RB2256 Na+ dependent nucleoside transporter-like protein YP_617735.1 2837488 R 317655 CDS YP_617736.1 103488175 4081907 complement(2838769..2841801) 1 NC_008048.1 TonB-dependent receptor 2841801 4081907 Sala_2698 Sphingopyxis alaskensis RB2256 TonB-dependent receptor YP_617736.1 2838769 R 317655 CDS YP_617737.1 103488176 4081908 2841961..2842344 1 NC_008048.1 hypothetical protein 2842344 4081908 Sala_2699 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617737.1 2841961 D 317655 CDS YP_617738.1 103488177 4081909 complement(2842341..2842766) 1 NC_008048.1 hypothetical protein 2842766 4081909 Sala_2700 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617738.1 2842341 R 317655 CDS YP_617739.1 103488178 4081910 complement(2842851..2845004) 1 NC_008048.1 pyridine nucleotide-disulfide oxidoreductase dimerisation subunit 2845004 4081910 Sala_2701 Sphingopyxis alaskensis RB2256 pyridine nucleotide-disulfide oxidoreductase dimerisation subunit YP_617739.1 2842851 R 317655 CDS YP_617740.1 103488179 4081911 complement(2845062..2845256) 1 NC_008048.1 hypothetical protein 2845256 4081911 Sala_2702 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617740.1 2845062 R 317655 CDS YP_617741.1 103488180 4081912 complement(2845253..2845861) 1 NC_008048.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 2845861 4081912 Sala_2703 Sphingopyxis alaskensis RB2256 RNA polymerase sigma factor YP_617741.1 2845253 R 317655 CDS YP_617742.1 103488181 4081913 complement(2845862..2846071) 1 NC_008048.1 hypothetical protein 2846071 4081913 Sala_2704 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617742.1 2845862 R 317655 CDS YP_617743.1 103488182 4081914 complement(2846086..2847210) 1 NC_008048.1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2847210 4081914 Sala_2705 Sphingopyxis alaskensis RB2256 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_617743.1 2846086 R 317655 CDS YP_617744.1 103488183 4082407 2853506..2855038 1 NC_008048.1 polysaccharide biosynthesis protein 2855038 4082407 Sala_2706 Sphingopyxis alaskensis RB2256 polysaccharide biosynthesis protein YP_617744.1 2853506 D 317655 CDS YP_617745.1 103488184 4082408 complement(2855023..2855448) 1 NC_008048.1 signal-transduction protein 2855448 4082408 Sala_2707 Sphingopyxis alaskensis RB2256 signal-transduction protein YP_617745.1 2855023 R 317655 CDS YP_617746.1 103488185 4082409 2855573..2855875 1 NC_008048.1 hypothetical protein 2855875 4082409 Sala_2708 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617746.1 2855573 D 317655 CDS YP_617747.1 103488186 4082410 2855872..2856264 1 NC_008048.1 thioesterase superfamily protein 2856264 4082410 Sala_2709 Sphingopyxis alaskensis RB2256 thioesterase superfamily protein YP_617747.1 2855872 D 317655 CDS YP_617748.1 103488187 4082411 complement(2856261..2857820) 1 NC_008048.1 hypothetical protein 2857820 4082411 Sala_2710 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617748.1 2856261 R 317655 CDS YP_617749.1 103488188 4082412 complement(2857831..2859255) 1 NC_008048.1 hypothetical protein 2859255 4082412 Sala_2711 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617749.1 2857831 R 317655 CDS YP_617750.1 103488189 4082413 complement(2859332..2860153) 1 NC_008048.1 hypothetical protein 2860153 4082413 Sala_2712 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617750.1 2859332 R 317655 CDS YP_617751.1 103488190 4082414 complement(2860411..2861235) 1 NC_008048.1 HemK family modification methylase 2861235 4082414 Sala_2713 Sphingopyxis alaskensis RB2256 HemK family modification methylase YP_617751.1 2860411 R 317655 CDS YP_617752.1 103488191 4082415 complement(2861337..2862404) 1 NC_008048.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 2862404 prfA 4082415 prfA Sphingopyxis alaskensis RB2256 peptide chain release factor 1 YP_617752.1 2861337 R 317655 CDS YP_617753.1 103488192 4082416 complement(2862577..2863872) 1 NC_008048.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 2863872 hisS 4082416 hisS Sphingopyxis alaskensis RB2256 histidyl-tRNA synthetase YP_617753.1 2862577 R 317655 CDS YP_617754.1 103488193 4082417 2863914..2865995 1 NC_008048.1 peptidase M61 2865995 4082417 Sala_2716 Sphingopyxis alaskensis RB2256 peptidase M61 YP_617754.1 2863914 D 317655 CDS YP_617755.1 103488194 4082418 complement(2865992..2866621) 1 NC_008048.1 hypothetical protein 2866621 4082418 Sala_2717 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617755.1 2865992 R 317655 CDS YP_617756.1 103488195 4082419 complement(2866731..2867756) 1 NC_008048.1 catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase 2867756 4082419 Sala_2718 Sphingopyxis alaskensis RB2256 aspartate-semialdehyde dehydrogenase YP_617756.1 2866731 R 317655 CDS YP_617757.1 103488196 4082420 complement(2867865..2868242) 1 NC_008048.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 2868242 rplS 4082420 rplS Sphingopyxis alaskensis RB2256 50S ribosomal protein L19 YP_617757.1 2867865 R 317655 CDS YP_617758.1 103488197 4082421 complement(2868247..2868984) 1 NC_008048.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 2868984 trmD 4082421 trmD Sphingopyxis alaskensis RB2256 tRNA (guanine-N(1)-)-methyltransferase YP_617758.1 2868247 R 317655 CDS YP_617759.1 103488198 4082422 complement(2868981..2869358) 1 NC_008048.1 PilT protein-like protein 2869358 4082422 Sala_2721 Sphingopyxis alaskensis RB2256 PilT protein-like protein YP_617759.1 2868981 R 317655 CDS YP_617760.1 103488199 4082423 complement(2869355..2869720) 1 NC_008048.1 hypothetical protein 2869720 4082423 Sala_2722 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617760.1 2869355 R 317655 CDS YP_617761.1 103488200 4082462 complement(2869767..2870699) 1 NC_008048.1 LysR family transcriptional regulator 2870699 4082462 Sala_2723 Sphingopyxis alaskensis RB2256 LysR family transcriptional regulator YP_617761.1 2869767 R 317655 CDS YP_617762.1 103488201 4082463 2870711..2870959 1 NC_008048.1 hypothetical protein 2870959 4082463 Sala_2724 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617762.1 2870711 D 317655 CDS YP_617763.1 103488202 4082464 complement(2871052..2871936) 1 NC_008048.1 OmpA/MotB protein 2871936 4082464 Sala_2725 Sphingopyxis alaskensis RB2256 OmpA/MotB protein YP_617763.1 2871052 R 317655 CDS YP_617764.1 103488203 4082465 complement(2872140..2872631) 1 NC_008048.1 16S rRNA processing protein RimM 2872631 4082465 Sala_2726 Sphingopyxis alaskensis RB2256 16S rRNA processing protein RimM YP_617764.1 2872140 R 317655 CDS YP_617765.1 103488204 4082466 complement(2872638..2873243) 1 NC_008048.1 30S ribosomal protein S16 2873243 4082466 Sala_2727 Sphingopyxis alaskensis RB2256 30S ribosomal protein S16 YP_617765.1 2872638 R 317655 CDS YP_617766.1 103488205 4082467 complement(2873285..2874739) 1 NC_008048.1 signal recognition particle protein 2874739 4082467 Sala_2728 Sphingopyxis alaskensis RB2256 signal recognition particle protein YP_617766.1 2873285 R 317655 CDS YP_617767.1 103488206 4082468 2874989..2876620 1 NC_008048.1 diguanylate cyclase/phosphodiesterase 2876620 4082468 Sala_2729 Sphingopyxis alaskensis RB2256 diguanylate cyclase/phosphodiesterase YP_617767.1 2874989 D 317655 CDS YP_617768.1 103488207 4082469 2876673..2877479 1 NC_008048.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 2877479 dapF 4082469 dapF Sphingopyxis alaskensis RB2256 diaminopimelate epimerase YP_617768.1 2876673 D 317655 CDS YP_617769.1 103488208 4082470 2877476..2878801 1 NC_008048.1 MiaB-like tRNA modifying enzyme 2878801 4082470 Sala_2731 Sphingopyxis alaskensis RB2256 MiaB-like tRNA modifying enzyme YP_617769.1 2877476 D 317655 CDS YP_617770.1 103488209 4082471 2878798..2879724 1 NC_008048.1 signal recognition particle-docking protein FtsY 2879724 4082471 Sala_2732 Sphingopyxis alaskensis RB2256 signal recognition particle-docking protein FtsY YP_617770.1 2878798 D 317655 CDS YP_617771.1 103488210 4082472 2879721..2880389 1 NC_008048.1 intracellular septation protein A 2880389 4082472 Sala_2733 Sphingopyxis alaskensis RB2256 intracellular septation protein A YP_617771.1 2879721 D 317655 CDS YP_617772.1 103488211 4082473 2880468..2881040 1 NC_008048.1 hypothetical protein 2881040 4082473 Sala_2734 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617772.1 2880468 D 317655 CDS YP_617773.1 103488212 4082474 complement(2881078..2881632) 1 NC_008048.1 acetyltransferase 2881632 4082474 Sala_2735 Sphingopyxis alaskensis RB2256 acetyltransferase YP_617773.1 2881078 R 317655 CDS YP_617774.1 103488213 4082475 complement(2881629..2883887) 1 NC_008048.1 hypothetical protein 2883887 4082475 Sala_2736 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617774.1 2881629 R 317655 CDS YP_617775.1 103488214 4082476 complement(2883892..2884890) 1 NC_008048.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 2884890 4082476 Sala_2737 Sphingopyxis alaskensis RB2256 delta-aminolevulinic acid dehydratase YP_617775.1 2883892 R 317655 CDS YP_617776.1 103488215 4082477 complement(2884970..2886544) 1 NC_008048.1 peptidase M23B 2886544 4082477 Sala_2738 Sphingopyxis alaskensis RB2256 peptidase M23B YP_617776.1 2884970 R 317655 CDS YP_617777.1 103488216 4082478 2886787..2889549 1 NC_008048.1 helicase-like protein 2889549 4082478 Sala_2739 Sphingopyxis alaskensis RB2256 helicase-like protein YP_617777.1 2886787 D 317655 CDS YP_617778.1 103488217 4082479 2889557..2889907 1 NC_008048.1 RNA-binding protein S4 2889907 4082479 Sala_2740 Sphingopyxis alaskensis RB2256 RNA-binding protein S4 YP_617778.1 2889557 D 317655 CDS YP_617779.1 103488218 4082480 2890022..2890360 1 NC_008048.1 4Fe-4S ferredoxin 2890360 4082480 Sala_2741 Sphingopyxis alaskensis RB2256 4Fe-4S ferredoxin YP_617779.1 2890022 D 317655 CDS YP_617780.1 103488219 4082481 2890513..2891163 1 NC_008048.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 2891163 clpP 4082481 clpP Sphingopyxis alaskensis RB2256 ATP-dependent Clp protease proteolytic subunit YP_617780.1 2890513 D 317655 CDS YP_617781.1 103488220 4080228 2891356..2892627 1 NC_008048.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 2892627 clpX 4080228 clpX Sphingopyxis alaskensis RB2256 ATP-dependent protease ATP-binding subunit ClpX YP_617781.1 2891356 D 317655 CDS YP_617782.1 103488221 4080229 2892898..2896083 1 NC_008048.1 putative outer membrane protein with a TonB box 2896083 4080229 Sala_2744 Sphingopyxis alaskensis RB2256 putative outer membrane protein with a TonB box YP_617782.1 2892898 D 317655 CDS YP_617783.1 103488222 4080230 complement(2896124..2896792) 1 NC_008048.1 endonuclease III 2896792 4080230 Sala_2745 Sphingopyxis alaskensis RB2256 endonuclease III YP_617783.1 2896124 R 317655 CDS YP_617784.1 103488223 4080231 2897026..2897469 1 NC_008048.1 hypothetical protein 2897469 4080231 Sala_2746 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617784.1 2897026 D 317655 CDS YP_617785.1 103488224 4080232 complement(2897516..2898241) 1 NC_008048.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 2898241 4080232 Sala_2747 Sphingopyxis alaskensis RB2256 dihydrodipicolinate reductase YP_617785.1 2897516 R 317655 CDS YP_617786.1 103488225 4080233 2898365..2899066 1 NC_008048.1 Modulates the activities of several enzymes which are inactive in their acetylated form; NAD-dependent deacetylase 2899066 4080233 Sala_2748 Sphingopyxis alaskensis RB2256 NAD-dependent deacetylase YP_617786.1 2898365 D 317655 CDS YP_617787.1 103488226 4080234 complement(2899069..2899536) 1 NC_008048.1 zinc-binding CMP/dCMP deaminase 2899536 4080234 Sala_2749 Sphingopyxis alaskensis RB2256 zinc-binding CMP/dCMP deaminase YP_617787.1 2899069 R 317655 CDS YP_617788.1 103488227 4080235 2899667..2899960 1 NC_008048.1 required for 70S ribosome assembly; 50S ribosomal protein L28 2899960 rpmB 4080235 rpmB Sphingopyxis alaskensis RB2256 50S ribosomal protein L28 YP_617788.1 2899667 D 317655 CDS YP_617789.1 103488228 4080236 complement(2900000..2900998) 1 NC_008048.1 hypothetical protein 2900998 4080236 Sala_2751 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617789.1 2900000 R 317655 CDS YP_617790.1 103488229 4080237 2901318..2901719 1 NC_008048.1 17 kDa surface antigen 2901719 4080237 Sala_2752 Sphingopyxis alaskensis RB2256 17 kDa surface antigen YP_617790.1 2901318 D 317655 CDS YP_617791.1 103488230 4080238 2901908..2902999 1 NC_008048.1 Ppx/GppA phosphatase 2902999 4080238 Sala_2753 Sphingopyxis alaskensis RB2256 Ppx/GppA phosphatase YP_617791.1 2901908 D 317655 CDS YP_617792.1 103488231 4080239 2902996..2903688 1 NC_008048.1 ribosomal RNA methyltransferase RrmJ/FtsJ 2903688 4080239 Sala_2754 Sphingopyxis alaskensis RB2256 ribosomal RNA methyltransferase RrmJ/FtsJ YP_617792.1 2902996 D 317655 CDS YP_617793.1 103488232 4080240 2903730..2905196 1 NC_008048.1 peptidase S41 2905196 4080240 Sala_2755 Sphingopyxis alaskensis RB2256 peptidase S41 YP_617793.1 2903730 D 317655 CDS YP_617794.1 103488233 4080241 2905222..2906679 1 NC_008048.1 catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase 2906679 4080241 Sala_2756 Sphingopyxis alaskensis RB2256 cobyric acid synthase YP_617794.1 2905222 D 317655 CDS YP_617795.1 103488234 4080242 complement(2906667..2906933) 1 NC_008048.1 hypothetical protein 2906933 4080242 Sala_2757 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617795.1 2906667 R 317655 CDS YP_617796.1 103488235 4080243 2907047..2908087 1 NC_008048.1 periplasmic protein-like protein 2908087 4080243 Sala_2758 Sphingopyxis alaskensis RB2256 periplasmic protein-like protein YP_617796.1 2907047 D 317655 CDS YP_617797.1 103488236 4080244 complement(2908033..2909298) 1 NC_008048.1 Type I secretion membrane fusion protein, HlyD 2909298 4080244 Sala_2759 Sphingopyxis alaskensis RB2256 Type I secretion membrane fusion protein, HlyD YP_617797.1 2908033 R 317655 CDS YP_617798.1 103488237 4080245 complement(2909295..2909705) 1 NC_008048.1 hypothetical protein 2909705 4080245 Sala_2760 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617798.1 2909295 R 317655 CDS YP_617799.1 103488238 4080246 2909783..2911033 1 NC_008048.1 type II secretion system protein E 2911033 4080246 Sala_2761 Sphingopyxis alaskensis RB2256 type II secretion system protein E YP_617799.1 2909783 D 317655 CDS YP_617800.1 103488239 4080324 2911035..2912036 1 NC_008048.1 type II secretion system protein 2912036 4080324 Sala_2762 Sphingopyxis alaskensis RB2256 type II secretion system protein YP_617800.1 2911035 D 317655 CDS YP_617801.1 103488240 4080325 2912038..2913018 1 NC_008048.1 type II secretion system protein 2913018 4080325 Sala_2763 Sphingopyxis alaskensis RB2256 type II secretion system protein YP_617801.1 2912038 D 317655 CDS YP_617802.1 103488241 4080326 2913020..2913925 1 NC_008048.1 hypothetical protein 2913925 4080326 Sala_2764 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617802.1 2913020 D 317655 CDS YP_617803.1 103488242 4080327 2913937..2914812 1 NC_008048.1 hypothetical protein 2914812 4080327 Sala_2765 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617803.1 2913937 D 317655 CDS YP_617804.1 103488243 4080328 2914805..2915296 1 NC_008048.1 peptidase A24A, prepilin type IV 2915296 4080328 Sala_2766 Sphingopyxis alaskensis RB2256 peptidase A24A, prepilin type IV YP_617804.1 2914805 D 317655 CDS YP_617805.1 103488244 4080329 complement(2915374..2919672) 1 NC_008048.1 hypothetical protein 2919672 4080329 Sala_2767 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617805.1 2915374 R 317655 CDS YP_617806.1 103488245 4080330 complement(2919674..2921599) 1 NC_008048.1 hypothetical protein 2921599 4080330 Sala_2768 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617806.1 2919674 R 317655 CDS YP_617807.1 103488246 4080331 complement(2921603..2923579) 1 NC_008048.1 hypothetical protein 2923579 4080331 Sala_2769 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617807.1 2921603 R 317655 CDS YP_617808.1 103488247 4080332 complement(2923581..2925014) 1 NC_008048.1 hypothetical protein 2925014 4080332 Sala_2770 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617808.1 2923581 R 317655 CDS YP_617809.1 103488248 4080333 complement(2925064..2926419) 1 NC_008048.1 converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; glutamate dehydrogenase 2926419 4080333 Sala_2771 Sphingopyxis alaskensis RB2256 glutamate dehydrogenase YP_617809.1 2925064 R 317655 CDS YP_617810.1 103488249 4080334 2926565..2927515 1 NC_008048.1 hypothetical protein 2927515 4080334 Sala_2772 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617810.1 2926565 D 317655 CDS YP_617811.1 103488250 4080335 complement(2927701..2930796) 1 NC_008048.1 proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichia coli this protein self regulates transcription via a DNA-binding domain at the N-terminus but the proteins from this group do not and in addition appear to have a truncated C-terminal domain; bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 2930796 4080335 Sala_2773 Sphingopyxis alaskensis RB2256 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase YP_617811.1 2927701 R 317655 CDS YP_617812.1 103488251 4080336 2930896..2931366 1 NC_008048.1 AsnC family transcriptional regulator 2931366 4080336 Sala_2774 Sphingopyxis alaskensis RB2256 AsnC family transcriptional regulator YP_617812.1 2930896 D 317655 CDS YP_617813.1 103488252 4080338 complement(2931531..2932316) 1 NC_008048.1 transglutaminase 2932316 4080338 Sala_2775 Sphingopyxis alaskensis RB2256 transglutaminase YP_617813.1 2931531 R 317655 CDS YP_617814.1 103488253 4080339 2932398..2933636 1 NC_008048.1 major facilitator superfamily transporter 2933636 4080339 Sala_2776 Sphingopyxis alaskensis RB2256 major facilitator superfamily transporter YP_617814.1 2932398 D 317655 CDS YP_617815.1 103488254 4080340 complement(2933609..2934370) 1 NC_008048.1 molybdopterin binding domain-containing protein 2934370 4080340 Sala_2777 Sphingopyxis alaskensis RB2256 molybdopterin binding domain-containing protein YP_617815.1 2933609 R 317655 CDS YP_617816.1 103488255 4080341 2934474..2935109 1 NC_008048.1 glutathione S-transferase-like protein 2935109 4080341 Sala_2778 Sphingopyxis alaskensis RB2256 glutathione S-transferase-like protein YP_617816.1 2934474 D 317655 CDS YP_617817.1 103488256 4080342 2935995..2937632 1 NC_008048.1 hypothetical protein 2937632 4080342 Sala_2779 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617817.1 2935995 D 317655 CDS YP_617818.1 103488257 4080361 2937629..2940907 1 NC_008048.1 DNA polymerase III subunit alpha 2940907 4080361 Sala_2780 Sphingopyxis alaskensis RB2256 DNA polymerase III subunit alpha YP_617818.1 2937629 D 317655 CDS YP_617819.1 103488258 4080362 2941130..2941753 1 NC_008048.1 AraC family transcriptional regulator 2941753 4080362 Sala_2781 Sphingopyxis alaskensis RB2256 AraC family transcriptional regulator YP_617819.1 2941130 D 317655 CDS YP_617820.1 103488259 4080363 2941893..2942990 1 NC_008048.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 2942990 pheS 4080363 pheS Sphingopyxis alaskensis RB2256 phenylalanyl-tRNA synthetase subunit alpha YP_617820.1 2941893 D 317655 CDS YP_617821.1 103488260 4080364 2942987..2945383 1 NC_008048.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 2945383 pheT 4080364 pheT Sphingopyxis alaskensis RB2256 phenylalanyl-tRNA synthetase subunit beta YP_617821.1 2942987 D 317655 CDS YP_617822.1 103488261 4080365 2945610..2947094 1 NC_008048.1 sulfate transporter 2947094 4080365 Sala_2784 Sphingopyxis alaskensis RB2256 sulfate transporter YP_617822.1 2945610 D 317655 CDS YP_617823.1 103488262 4080366 2947108..2947959 1 NC_008048.1 hypothetical protein 2947959 4080366 Sala_2785 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617823.1 2947108 D 317655 CDS YP_617824.1 103488263 4080367 2947967..2948305 1 NC_008048.1 TraR/DksA family transcriptional regulator 2948305 4080367 Sala_2786 Sphingopyxis alaskensis RB2256 TraR/DksA family transcriptional regulator YP_617824.1 2947967 D 317655 CDS YP_617825.1 103488264 4080368 complement(2948318..2951125) 1 NC_008048.1 catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; PII uridylyl-transferase 2951125 4080368 Sala_2787 Sphingopyxis alaskensis RB2256 PII uridylyl-transferase YP_617825.1 2948318 R 317655 CDS YP_617826.1 103488265 4080369 2951214..2951636 1 NC_008048.1 hypothetical protein 2951636 4080369 Sala_2788 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617826.1 2951214 D 317655 CDS YP_617827.1 103488266 4080370 2951638..2952249 1 NC_008048.1 TetR family transcriptional regulator 2952249 4080370 Sala_2789 Sphingopyxis alaskensis RB2256 TetR family transcriptional regulator YP_617827.1 2951638 D 317655 CDS YP_617828.1 103488267 4080371 2952246..2953181 1 NC_008048.1 N-acetyltransferase GCN5 2953181 4080371 Sala_2790 Sphingopyxis alaskensis RB2256 N-acetyltransferase GCN5 YP_617828.1 2952246 D 317655 CDS YP_617829.1 103488268 4080372 complement(2953178..2955772) 1 NC_008048.1 This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 2955772 4080372 Sala_2791 Sphingopyxis alaskensis RB2256 DNA mismatch repair protein MutS YP_617829.1 2953178 R 317655 CDS YP_617830.1 103488269 4080373 2956269..2958533 1 NC_008048.1 NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme 2958533 4080373 Sala_2792 Sphingopyxis alaskensis RB2256 malic enzyme YP_617830.1 2956269 D 317655 CDS YP_617831.1 103488270 4080374 complement(2958643..2959128) 1 NC_008048.1 tmRNA-binding small protein A 2959128 4080374 Sala_2793 Sphingopyxis alaskensis RB2256 tmRNA-binding small protein A YP_617831.1 2958643 R 317655 CDS YP_617832.1 103488271 4080375 2959298..2959828 1 NC_008048.1 hypothetical protein 2959828 4080375 Sala_2794 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617832.1 2959298 D 317655 CDS YP_617833.1 103488272 4080376 2959825..2960355 1 NC_008048.1 hypothetical protein 2960355 4080376 Sala_2795 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617833.1 2959825 D 317655 CDS YP_617834.1 103488273 4080377 complement(2960411..2961115) 1 NC_008048.1 hypothetical protein 2961115 4080377 Sala_2796 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617834.1 2960411 R 317655 CDS YP_617835.1 103488274 4080378 complement(2961165..2961824) 1 NC_008048.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 2961824 adk 4080378 adk Sphingopyxis alaskensis RB2256 adenylate kinase YP_617835.1 2961165 R 317655 CDS YP_617836.1 103488275 4080379 complement(2961872..2963245) 1 NC_008048.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 2963245 secY 4080379 secY Sphingopyxis alaskensis RB2256 preprotein translocase subunit SecY YP_617836.1 2961872 R 317655 CDS YP_617837.1 103488276 4080380 complement(2963514..2964041) 1 NC_008048.1 late assembly protein; 50S ribosomal protein L15 2964041 rplO 4080380 rplO Sphingopyxis alaskensis RB2256 50S ribosomal protein L15 YP_617837.1 2963514 R 317655 CDS YP_617838.1 103488277 4080381 complement(2964115..2964297) 1 NC_008048.1 50S ribosomal protein L30 2964297 4080381 Sala_2800 Sphingopyxis alaskensis RB2256 50S ribosomal protein L30 YP_617838.1 2964115 R 317655 CDS YP_617839.1 103488278 4080382 complement(2964302..2965030) 1 NC_008048.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 2965030 rpsE 4080382 rpsE Sphingopyxis alaskensis RB2256 30S ribosomal protein S5 YP_617839.1 2964302 R 317655 CDS YP_617840.1 103488279 4080383 complement(2965033..2965386) 1 NC_008048.1 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 2965386 rplR 4080383 rplR Sphingopyxis alaskensis RB2256 50S ribosomal protein L18 YP_617840.1 2965033 R 317655 CDS YP_617841.1 103488280 4080384 complement(2965390..2965923) 1 NC_008048.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 2965923 rplF 4080384 rplF Sphingopyxis alaskensis RB2256 50S ribosomal protein L6 YP_617841.1 2965390 R 317655 CDS YP_617842.1 103488281 4080385 complement(2965923..2966327) 1 NC_008048.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 2966327 rpsH 4080385 rpsH Sphingopyxis alaskensis RB2256 30S ribosomal protein S8 YP_617842.1 2965923 R 317655 CDS YP_617843.1 103488282 4080386 complement(2966340..2966645) 1 NC_008048.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 2966645 rpsN 4080386 rpsN Sphingopyxis alaskensis RB2256 30S ribosomal protein S14 YP_617843.1 2966340 R 317655 CDS YP_617844.1 103488283 4080387 complement(2966699..2967277) 1 NC_008048.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 2967277 rplE 4080387 rplE Sphingopyxis alaskensis RB2256 50S ribosomal protein L5 YP_617844.1 2966699 R 317655 CDS YP_617845.1 103488284 4080388 complement(2967270..2967587) 1 NC_008048.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 2967587 rplX 4080388 rplX Sphingopyxis alaskensis RB2256 50S ribosomal protein L24 YP_617845.1 2967270 R 317655 CDS YP_617846.1 103488285 4080389 complement(2967590..2967958) 1 NC_008048.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 2967958 rplN 4080389 rplN Sphingopyxis alaskensis RB2256 50S ribosomal protein L14 YP_617846.1 2967590 R 317655 CDS YP_617847.1 103488286 4080390 complement(2968027..2968293) 1 NC_008048.1 primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 2968293 rpsQ 4080390 rpsQ Sphingopyxis alaskensis RB2256 30S ribosomal protein S17 YP_617847.1 2968027 R 317655 CDS YP_617848.1 103488287 4080391 complement(2968305..2968508) 1 NC_008048.1 one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 2968508 4080391 Sala_2810 Sphingopyxis alaskensis RB2256 50S ribosomal protein L29 YP_617848.1 2968305 R 317655 CDS YP_617849.1 103488288 4080392 complement(2968513..2968944) 1 NC_008048.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 2968944 rplP 4080392 rplP Sphingopyxis alaskensis RB2256 50S ribosomal protein L16 YP_617849.1 2968513 R 317655 CDS YP_617850.1 103488289 4080393 complement(2968956..2969663) 1 NC_008048.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 2969663 rpsC 4080393 rpsC Sphingopyxis alaskensis RB2256 30S ribosomal protein S3 YP_617850.1 2968956 R 317655 CDS YP_617851.1 103488290 4080394 complement(2969665..2970045) 1 NC_008048.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 2970045 rplV 4080394 rplV Sphingopyxis alaskensis RB2256 50S ribosomal protein L22 YP_617851.1 2969665 R 317655 CDS YP_617852.1 103488291 4080395 complement(2970045..2970320) 1 NC_008048.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 2970320 rpsS 4080395 rpsS Sphingopyxis alaskensis RB2256 30S ribosomal protein S19 YP_617852.1 2970045 R 317655 CDS YP_617853.1 103488292 4080396 complement(2970324..2971160) 1 NC_008048.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 2971160 rplB 4080396 rplB Sphingopyxis alaskensis RB2256 50S ribosomal protein L2 YP_617853.1 2970324 R 317655 CDS YP_617854.1 103488293 4080397 complement(2971183..2971491) 1 NC_008048.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 2971491 rplW 4080397 rplW Sphingopyxis alaskensis RB2256 50S ribosomal protein L23 YP_617854.1 2971183 R 317655 CDS YP_617855.1 103488294 4080398 complement(2971484..2972110) 1 NC_008048.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 2972110 rplD 4080398 rplD Sphingopyxis alaskensis RB2256 50S ribosomal protein L4 YP_617855.1 2971484 R 317655 CDS YP_617856.1 103488295 4080399 complement(2972113..2972886) 1 NC_008048.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 2972886 rplC 4080399 rplC Sphingopyxis alaskensis RB2256 50S ribosomal protein L3 YP_617856.1 2972113 R 317655 CDS YP_617857.1 103488296 4080400 complement(2973201..2973512) 1 NC_008048.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 2973512 rpsJ 4080400 rpsJ Sphingopyxis alaskensis RB2256 30S ribosomal protein S10 YP_617857.1 2973201 R 317655 CDS YP_617858.1 103488297 4080401 complement(2973661..2974854) 1 NC_008048.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 2974854 4080401 Sala_2820 Sphingopyxis alaskensis RB2256 elongation factor Tu YP_617858.1 2973661 R 317655 CDS YP_617859.1 103488298 4080402 complement(2974972..2977065) 1 NC_008048.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 2977065 4080402 Sala_2821 Sphingopyxis alaskensis RB2256 elongation factor G YP_617859.1 2974972 R 317655 CDS YP_617860.1 103488299 4080403 complement(2977162..2977632) 1 NC_008048.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 2977632 4080403 Sala_2822 Sphingopyxis alaskensis RB2256 30S ribosomal protein S7 YP_617860.1 2977162 R 317655 CDS YP_617861.1 103488300 4080404 complement(2977710..2978081) 1 NC_008048.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 2978081 rpsL 4080404 rpsL Sphingopyxis alaskensis RB2256 30S ribosomal protein S12 YP_617861.1 2977710 R 317655 CDS YP_617862.1 103488301 4080405 complement(2978359..2979420) 1 NC_008048.1 peptidase T2, asparaginase 2 2979420 4080405 Sala_2824 Sphingopyxis alaskensis RB2256 peptidase T2, asparaginase 2 YP_617862.1 2978359 R 317655 CDS YP_617863.1 103488302 4080406 complement(2979464..2980765) 1 NC_008048.1 amidohydrolase 2980765 4080406 Sala_2825 Sphingopyxis alaskensis RB2256 amidohydrolase YP_617863.1 2979464 R 317655 CDS YP_617864.1 103488303 4080407 complement(2980806..2982962) 1 NC_008048.1 peptidase S8/S53 subtilisin kexin sedolisin 2982962 4080407 Sala_2826 Sphingopyxis alaskensis RB2256 peptidase S8/S53 subtilisin kexin sedolisin YP_617864.1 2980806 R 317655 CDS YP_617865.1 103488304 4080408 2983598..2984311 1 NC_008048.1 pyrimidine 5-nucleotidase 2984311 4080408 Sala_2827 Sphingopyxis alaskensis RB2256 pyrimidine 5-nucleotidase YP_617865.1 2983598 D 317655 CDS YP_617866.1 103488305 4080409 2984308..2985150 1 NC_008048.1 catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 2985150 dapD 4080409 dapD Sphingopyxis alaskensis RB2256 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase YP_617866.1 2984308 D 317655 CDS YP_617867.1 103488306 4080410 complement(2985157..2985843) 1 NC_008048.1 2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase 2985843 gpmA 4080410 gpmA Sphingopyxis alaskensis RB2256 phosphoglyceromutase YP_617867.1 2985157 R 317655 CDS YP_617868.1 103488307 4080411 2986033..2986491 1 NC_008048.1 heat shock protein Hsp20 2986491 4080411 Sala_2830 Sphingopyxis alaskensis RB2256 heat shock protein Hsp20 YP_617868.1 2986033 D 317655 CDS YP_617869.1 103488308 4080412 complement(2986552..2987019) 1 NC_008048.1 N-acetyltransferase GCN5 2987019 4080412 Sala_2831 Sphingopyxis alaskensis RB2256 N-acetyltransferase GCN5 YP_617869.1 2986552 R 317655 CDS YP_617870.1 103488309 4080413 complement(2987016..2988125) 1 NC_008048.1 peptidase M14, carboxypeptidase A 2988125 4080413 Sala_2832 Sphingopyxis alaskensis RB2256 peptidase M14, carboxypeptidase A YP_617870.1 2987016 R 317655 CDS YP_617871.1 103488310 4080414 complement(2988122..2988748) 1 NC_008048.1 hypothetical protein 2988748 4080414 Sala_2833 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617871.1 2988122 R 317655 CDS YP_617872.1 103488311 4080415 complement(2988820..2989485) 1 NC_008048.1 cell wall hydrolase SleB 2989485 4080415 Sala_2834 Sphingopyxis alaskensis RB2256 cell wall hydrolase SleB YP_617872.1 2988820 R 317655 CDS YP_617873.1 103488312 4080416 complement(2989683..2990018) 1 NC_008048.1 hypothetical protein 2990018 4080416 Sala_2835 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617873.1 2989683 R 317655 CDS YP_617874.1 103488313 4080417 complement(2990144..2990608) 1 NC_008048.1 putative PTS IIA-like nitrogen-regulatory protein PtsN 2990608 4080417 Sala_2836 Sphingopyxis alaskensis RB2256 putative PTS IIA-like nitrogen-regulatory protein PtsN YP_617874.1 2990144 R 317655 CDS YP_617875.1 103488314 4080418 complement(2990758..2991333) 1 NC_008048.1 sigma 54 modulation protein/ribosomal protein S30EA 2991333 4080418 Sala_2837 Sphingopyxis alaskensis RB2256 sigma 54 modulation protein/ribosomal protein S30EA YP_617875.1 2990758 R 317655 CDS YP_617876.1 103488315 4080631 complement(2991379..2992074) 1 NC_008048.1 DNA polymerase III subunit epsilon 2992074 4080631 Sala_2838 Sphingopyxis alaskensis RB2256 DNA polymerase III subunit epsilon YP_617876.1 2991379 R 317655 CDS YP_617877.1 103488316 4080632 complement(2992094..2992717) 1 NC_008048.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 2992717 coaE 4080632 coaE Sphingopyxis alaskensis RB2256 dephospho-CoA kinase YP_617877.1 2992094 R 317655 CDS YP_617878.1 103488317 4080633 complement(2992714..2993538) 1 NC_008048.1 shikimate 5-dehydrogenase 2993538 4080633 Sala_2840 Sphingopyxis alaskensis RB2256 shikimate 5-dehydrogenase YP_617878.1 2992714 R 317655 CDS YP_617879.1 103488318 4080634 complement(2993535..2994131) 1 NC_008048.1 maf protein 2994131 4080634 Sala_2841 Sphingopyxis alaskensis RB2256 maf protein YP_617879.1 2993535 R 317655 CDS YP_617880.1 103488319 4080635 complement(2994128..2994940) 1 NC_008048.1 hypothetical protein 2994940 4080635 Sala_2842 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617880.1 2994128 R 317655 CDS YP_617881.1 103488320 4080636 2995278..2996306 1 NC_008048.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 2996306 hemE 4080636 hemE Sphingopyxis alaskensis RB2256 uroporphyrinogen decarboxylase YP_617881.1 2995278 D 317655 CDS YP_617882.1 103488321 4080637 2996308..2996757 1 NC_008048.1 hypothetical protein 2996757 4080637 Sala_2844 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617882.1 2996308 D 317655 CDS YP_617883.1 103488322 4080638 2996954..2998210 1 NC_008048.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 2998210 rho 4080638 rho Sphingopyxis alaskensis RB2256 transcription termination factor Rho YP_617883.1 2996954 D 317655 CDS YP_617884.1 103488323 4080639 2998233..2998955 1 NC_008048.1 integral membrane protein TerC 2998955 4080639 Sala_2846 Sphingopyxis alaskensis RB2256 integral membrane protein TerC YP_617884.1 2998233 D 317655 CDS YP_617885.1 103488324 4080640 2999079..2999324 1 NC_008048.1 hypothetical protein 2999324 4080640 Sala_2847 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617885.1 2999079 D 317655 CDS YP_617886.1 103488325 4080641 2999311..2999733 1 NC_008048.1 hypothetical protein 2999733 4080641 Sala_2848 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617886.1 2999311 D 317655 CDS YP_617887.1 103488326 4080642 2999787..3000188 1 NC_008048.1 hypothetical protein 3000188 4080642 Sala_2849 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617887.1 2999787 D 317655 CDS YP_617888.1 103488327 4080643 complement(3000185..3000583) 1 NC_008048.1 hypothetical protein 3000583 4080643 Sala_2850 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617888.1 3000185 R 317655 CDS YP_617889.1 103488328 4080644 complement(3000580..3001278) 1 NC_008048.1 carboxymethylenebutenolidase 3001278 4080644 Sala_2851 Sphingopyxis alaskensis RB2256 carboxymethylenebutenolidase YP_617889.1 3000580 R 317655 CDS YP_617890.1 103488329 4080645 3001384..3001677 1 NC_008048.1 hypothetical protein 3001677 4080645 Sala_2852 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617890.1 3001384 D 317655 CDS YP_617891.1 103488330 4080646 3001746..3003005 1 NC_008048.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 3003005 trmE 4080646 trmE Sphingopyxis alaskensis RB2256 tRNA modification GTPase TrmE YP_617891.1 3001746 D 317655 CDS YP_617892.1 103488331 4080647 3003081..3004940 1 NC_008048.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 3004940 4080647 Sala_2854 Sphingopyxis alaskensis RB2256 tRNA uridine 5-carboxymethylaminomethyl modification protein GidA YP_617892.1 3003081 D 317655 CDS YP_617893.1 103488332 4080648 3004996..3005697 1 NC_008048.1 methyltransferase GidB 3005697 4080648 Sala_2855 Sphingopyxis alaskensis RB2256 methyltransferase GidB YP_617893.1 3004996 D 317655 CDS YP_617894.1 103488333 4080649 3005694..3006476 1 NC_008048.1 cobyrinic acid a,c-diamide synthase 3006476 4080649 Sala_2856 Sphingopyxis alaskensis RB2256 cobyrinic acid a,c-diamide synthase YP_617894.1 3005694 D 317655 CDS YP_617895.1 103488334 4080650 3006477..3007436 1 NC_008048.1 parB-like partition proteins 3007436 4080650 Sala_2857 Sphingopyxis alaskensis RB2256 parB-like partition proteins YP_617895.1 3006477 D 317655 CDS YP_617896.1 103488335 4080651 3007769..3008266 1 NC_008048.1 hypothetical protein 3008266 4080651 Sala_2858 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617896.1 3007769 D 317655 CDS YP_617897.1 103488336 4080652 3008470..3009294 1 NC_008048.1 hypothetical protein 3009294 4080652 Sala_2859 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617897.1 3008470 D 317655 CDS YP_617898.1 103488337 4080653 3009326..3012124 1 NC_008048.1 hypothetical protein 3012124 4080653 Sala_2860 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617898.1 3009326 D 317655 CDS YP_617899.1 103488338 4080654 3012207..3013742 1 NC_008048.1 hypothetical protein 3013742 4080654 Sala_2861 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617899.1 3012207 D 317655 CDS YP_617900.1 103488339 4080655 3013768..3014199 1 NC_008048.1 GtrA-like protein 3014199 4080655 Sala_2862 Sphingopyxis alaskensis RB2256 GtrA-like protein YP_617900.1 3013768 D 317655 CDS YP_617901.1 103488340 4080656 3014196..3016034 1 NC_008048.1 hypothetical protein 3016034 4080656 Sala_2863 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617901.1 3014196 D 317655 CDS YP_617902.1 103488341 4080657 complement(3016042..3016527) 1 NC_008048.1 protein-methionine-S-oxide reductase 3016527 4080657 Sala_2864 Sphingopyxis alaskensis RB2256 protein-methionine-S-oxide reductase YP_617902.1 3016042 R 317655 CDS YP_617903.1 103488342 4080658 complement(3016583..3017839) 1 NC_008048.1 linalool 8-monooxygenase 3017839 4080658 Sala_2865 Sphingopyxis alaskensis RB2256 linalool 8-monooxygenase YP_617903.1 3016583 R 317655 CDS YP_617904.1 103488343 4080659 complement(3017925..3019169) 1 NC_008048.1 Na+ efflux pump permease-like protein 3019169 4080659 Sala_2866 Sphingopyxis alaskensis RB2256 Na+ efflux pump permease-like protein YP_617904.1 3017925 R 317655 CDS YP_617905.1 103488344 4080660 complement(3019166..3020122) 1 NC_008048.1 ABC transporter 3020122 4080660 Sala_2867 Sphingopyxis alaskensis RB2256 ABC transporter YP_617905.1 3019166 R 317655 CDS YP_617906.1 103488345 4080661 3020190..3021242 1 NC_008048.1 4Fe-4S binding protein 3021242 4080661 Sala_2868 Sphingopyxis alaskensis RB2256 4Fe-4S binding protein YP_617906.1 3020190 D 317655 CDS YP_617907.1 103488346 4080662 3021260..3021517 1 NC_008048.1 hypothetical protein 3021517 4080662 Sala_2869 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617907.1 3021260 D 317655 CDS YP_617908.1 103488347 4080663 complement(3021514..3021888) 1 NC_008048.1 hypothetical protein 3021888 4080663 Sala_2870 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617908.1 3021514 R 317655 CDS YP_617909.1 103488348 4080664 complement(3021878..3022666) 1 NC_008048.1 hypothetical protein 3022666 4080664 Sala_2871 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617909.1 3021878 R 317655 CDS YP_617910.1 103488349 4080665 3022677..3023675 1 NC_008048.1 PfkB protein 3023675 4080665 Sala_2872 Sphingopyxis alaskensis RB2256 PfkB protein YP_617910.1 3022677 D 317655 CDS YP_617911.1 103488350 4080666 complement(3023774..3025300) 1 NC_008048.1 O-antigen and teichoic acid-like export protein 3025300 4080666 Sala_2873 Sphingopyxis alaskensis RB2256 O-antigen and teichoic acid-like export protein YP_617911.1 3023774 R 317655 CDS YP_617912.1 103488351 4080667 complement(3025377..3026369) 1 NC_008048.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 3026369 gpsA 4080667 gpsA Sphingopyxis alaskensis RB2256 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_617912.1 3025377 R 317655 CDS YP_617913.1 103488352 4080668 complement(3026366..3027400) 1 NC_008048.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; putative DNA-binding/iron metalloprotein/AP endonuclease 3027400 4080668 Sala_2875 Sphingopyxis alaskensis RB2256 putative DNA-binding/iron metalloprotein/AP endonuclease YP_617913.1 3026366 R 317655 CDS YP_617914.1 103488353 4080669 3027464..3028411 1 NC_008048.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 3028411 hemC 4080669 hemC Sphingopyxis alaskensis RB2256 porphobilinogen deaminase YP_617914.1 3027464 D 317655 CDS YP_617915.1 103488354 4080670 3028408..3029097 1 NC_008048.1 uroporphyrinogen-III synthase 3029097 4080670 Sala_2877 Sphingopyxis alaskensis RB2256 uroporphyrinogen-III synthase YP_617915.1 3028408 D 317655 CDS YP_617916.1 103488355 4080671 3029117..3030025 1 NC_008048.1 hypothetical protein 3030025 4080671 Sala_2878 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617916.1 3029117 D 317655 CDS YP_617917.1 103488356 4080672 3030073..3031275 1 NC_008048.1 acyl-CoA dehydrogenase-like protein 3031275 4080672 Sala_2879 Sphingopyxis alaskensis RB2256 acyl-CoA dehydrogenase-like protein YP_617917.1 3030073 D 317655 CDS YP_617918.1 103488357 4080673 3031268..3032395 1 NC_008048.1 L-carnitine dehydratase/bile acid-inducible protein F 3032395 4080673 Sala_2880 Sphingopyxis alaskensis RB2256 L-carnitine dehydratase/bile acid-inducible protein F YP_617918.1 3031268 D 317655 CDS YP_617919.1 103488358 4080674 3032462..3032737 1 NC_008048.1 hypothetical protein 3032737 4080674 Sala_2881 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617919.1 3032462 D 317655 CDS YP_617920.1 103488359 4080675 complement(3032827..3035187) 1 NC_008048.1 TonB-dependent receptor 3035187 4080675 Sala_2882 Sphingopyxis alaskensis RB2256 TonB-dependent receptor YP_617920.1 3032827 R 317655 CDS YP_617921.1 103488360 4080676 3035391..3036026 1 NC_008048.1 TetR family transcriptional regulator 3036026 4080676 Sala_2883 Sphingopyxis alaskensis RB2256 TetR family transcriptional regulator YP_617921.1 3035391 D 317655 CDS YP_617922.1 103488361 4080677 3036057..3036569 1 NC_008048.1 hypothetical protein 3036569 4080677 Sala_2884 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617922.1 3036057 D 317655 CDS YP_617923.1 103488362 4080678 complement(3036617..3037204) 1 NC_008048.1 methionine biosynthesis MetW 3037204 4080678 Sala_2885 Sphingopyxis alaskensis RB2256 methionine biosynthesis MetW YP_617923.1 3036617 R 317655 CDS YP_617924.1 103488363 4080679 complement(3037204..3038325) 1 NC_008048.1 Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine; homoserine O-acetyltransferase 3038325 metX 4080679 metX Sphingopyxis alaskensis RB2256 homoserine O-acetyltransferase YP_617924.1 3037204 R 317655 CDS YP_617925.1 103488364 4080680 3038668..3039783 1 NC_008048.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 3039783 4080680 Sala_2887 Sphingopyxis alaskensis RB2256 histidinol-phosphate aminotransferase YP_617925.1 3038668 D 317655 CDS YP_617926.1 103488365 4080681 3039783..3040685 1 NC_008048.1 dual function enzyme catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate and the formation of tyrosine from arogenate; cyclohexadienyl dehydrogenase 3040685 4080681 Sala_2888 Sphingopyxis alaskensis RB2256 cyclohexadienyl dehydrogenase YP_617926.1 3039783 D 317655 CDS YP_617927.1 103488366 4080682 complement(3040787..3041518) 1 NC_008048.1 phospholipid/glycerol acyltransferase 3041518 4080682 Sala_2889 Sphingopyxis alaskensis RB2256 phospholipid/glycerol acyltransferase YP_617927.1 3040787 R 317655 CDS YP_617928.1 103488367 4080683 complement(3041530..3042060) 1 NC_008048.1 hypothetical protein 3042060 4080683 Sala_2890 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617928.1 3041530 R 317655 CDS YP_617929.1 103488368 4080684 complement(3042057..3042962) 1 NC_008048.1 hypothetical protein 3042962 4080684 Sala_2891 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617929.1 3042057 R 317655 CDS YP_617930.1 103488369 4080685 complement(3042970..3043683) 1 NC_008048.1 ABC transporter 3043683 4080685 Sala_2892 Sphingopyxis alaskensis RB2256 ABC transporter YP_617930.1 3042970 R 317655 CDS YP_617931.1 103488370 4080686 3043859..3044623 1 NC_008048.1 Zinc finger/thioredoxin putative 3044623 4080686 Sala_2893 Sphingopyxis alaskensis RB2256 Zinc finger/thioredoxin putative YP_617931.1 3043859 D 317655 CDS YP_617932.1 103488371 4080687 complement(3044761..3045816) 1 NC_008048.1 hypothetical protein 3045816 4080687 Sala_2894 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617932.1 3044761 R 317655 CDS YP_617933.1 103488372 4080919 3046054..3047256 1 NC_008048.1 L-carnitine dehydratase/bile acid-inducible protein F 3047256 4080919 Sala_2895 Sphingopyxis alaskensis RB2256 L-carnitine dehydratase/bile acid-inducible protein F YP_617933.1 3046054 D 317655 CDS YP_617934.1 103488373 4080920 3047414..3048628 1 NC_008048.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 3048628 4080920 Sala_2896 Sphingopyxis alaskensis RB2256 acetyl-CoA acetyltransferase YP_617934.1 3047414 D 317655 CDS YP_617935.1 103488374 4080921 3048634..3050217 1 NC_008048.1 acyl-CoA dehydrogenase-like protein 3050217 4080921 Sala_2897 Sphingopyxis alaskensis RB2256 acyl-CoA dehydrogenase-like protein YP_617935.1 3048634 D 317655 CDS YP_617936.1 103488375 4080922 3050502..3051002 1 NC_008048.1 LuxR family transcriptional regulator 3051002 4080922 Sala_2898 Sphingopyxis alaskensis RB2256 LuxR family transcriptional regulator YP_617936.1 3050502 D 317655 CDS YP_617937.1 103488376 4080923 3051064..3051438 1 NC_008048.1 hypothetical protein 3051438 4080923 Sala_2899 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617937.1 3051064 D 317655 CDS YP_617938.1 103488377 4080924 3051463..3051876 1 NC_008048.1 hypothetical protein 3051876 4080924 Sala_2900 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617938.1 3051463 D 317655 CDS YP_617939.1 103488378 4080925 3051904..3052368 1 NC_008048.1 MarR family transcriptional regulator 3052368 4080925 Sala_2901 Sphingopyxis alaskensis RB2256 MarR family transcriptional regulator YP_617939.1 3051904 D 317655 CDS YP_617940.1 103488379 4080926 complement(3052440..3053186) 1 NC_008048.1 RNA polymerase subunit sigma 28 3053186 4080926 Sala_2902 Sphingopyxis alaskensis RB2256 RNA polymerase subunit sigma 28 YP_617940.1 3052440 R 317655 CDS YP_617941.1 103488380 4080927 complement(3053176..3055299) 1 NC_008048.1 membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 3055299 flhA 4080927 flhA Sphingopyxis alaskensis RB2256 flagellar biosynthesis protein FlhA YP_617941.1 3053176 R 317655 CDS YP_617942.1 103488381 4080928 complement(3055296..3056126) 1 NC_008048.1 lytic transglycosylase, catalytic 3056126 4080928 Sala_2904 Sphingopyxis alaskensis RB2256 lytic transglycosylase, catalytic YP_617942.1 3055296 R 317655 CDS YP_617943.1 103488382 4080929 complement(3056201..3056506) 1 NC_008048.1 hypothetical protein 3056506 4080929 Sala_2905 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617943.1 3056201 R 317655 CDS YP_617944.1 103488383 4080930 complement(3056506..3056805) 1 NC_008048.1 putative anti-sigma-28 factor, FlgM 3056805 4080930 Sala_2906 Sphingopyxis alaskensis RB2256 putative anti-sigma-28 factor, FlgM YP_617944.1 3056506 R 317655 CDS YP_617945.1 103488384 4080931 complement(3056974..3057486) 1 NC_008048.1 flagellar protein 3057486 4080931 Sala_2907 Sphingopyxis alaskensis RB2256 flagellar protein YP_617945.1 3056974 R 317655 CDS YP_617946.1 103488385 4080932 3057712..3058515 1 NC_008048.1 flagellar basal-body rod protein FlgC 3058515 4080932 Sala_2908 Sphingopyxis alaskensis RB2256 flagellar basal-body rod protein FlgC YP_617946.1 3057712 D 317655 CDS YP_617947.1 103488386 4080933 3058517..3058819 1 NC_008048.1 flagellar hook capping protein 3058819 4080933 Sala_2909 Sphingopyxis alaskensis RB2256 flagellar hook capping protein YP_617947.1 3058517 D 317655 CDS YP_617948.1 103488387 4080934 3058824..3059651 1 NC_008048.1 hypothetical protein 3059651 4080934 Sala_2910 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617948.1 3058824 D 317655 CDS YP_617949.1 103488388 4080935 3059687..3060430 1 NC_008048.1 flagellar basal-body rod FlgF 3060430 4080935 Sala_2911 Sphingopyxis alaskensis RB2256 flagellar basal-body rod FlgF YP_617949.1 3059687 D 317655 CDS YP_617950.1 103488389 4080936 3060442..3061227 1 NC_008048.1 makes up the distal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagella; flagellar basal body rod protein FlgG 3061227 flgG 4080936 flgG Sphingopyxis alaskensis RB2256 flagellar basal body rod protein FlgG YP_617950.1 3060442 D 317655 CDS YP_617951.1 103488390 4080937 3061208..3061867 1 NC_008048.1 flagellar L-ring protein 3061867 4080937 Sala_2913 Sphingopyxis alaskensis RB2256 flagellar L-ring protein YP_617951.1 3061208 D 317655 CDS YP_617952.1 103488391 4081109 3061877..3062992 1 NC_008048.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein 3062992 flgI 4081109 flgI Sphingopyxis alaskensis RB2256 flagellar basal body P-ring protein YP_617952.1 3061877 D 317655 CDS YP_617953.1 103488392 4081110 3062989..3063306 1 NC_008048.1 peptidoglycan hydrolase 3063306 4081110 Sala_2915 Sphingopyxis alaskensis RB2256 peptidoglycan hydrolase YP_617953.1 3062989 D 317655 CDS YP_617954.1 103488393 4081111 3063303..3064628 1 NC_008048.1 flagellar hook-associated protein 3064628 4081111 Sala_2916 Sphingopyxis alaskensis RB2256 flagellar hook-associated protein YP_617954.1 3063303 D 317655 CDS YP_617955.1 103488394 4081112 3064644..3065474 1 NC_008048.1 flagellin-like protein 3065474 4081112 Sala_2917 Sphingopyxis alaskensis RB2256 flagellin-like protein YP_617955.1 3064644 D 317655 CDS YP_617956.1 103488395 4081113 3065576..3066439 1 NC_008048.1 With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotA 3066439 4081113 Sala_2918 Sphingopyxis alaskensis RB2256 flagellar motor protein MotA YP_617956.1 3065576 D 317655 CDS YP_617957.1 103488396 4081114 3066439..3067302 1 NC_008048.1 OmpA/MotB protein 3067302 4081114 Sala_2919 Sphingopyxis alaskensis RB2256 OmpA/MotB protein YP_617957.1 3066439 D 317655 CDS YP_617958.1 103488397 4081115 3067483..3068550 1 NC_008048.1 sigma-54 dependent trancsriptional regulator 3068550 4081115 Sala_2920 Sphingopyxis alaskensis RB2256 sigma-54 dependent trancsriptional regulator YP_617958.1 3067483 D 317655 CDS YP_617959.1 103488398 4081116 complement(3068741..3069130) 1 NC_008048.1 flagellar protein FliS 3069130 4081116 Sala_2921 Sphingopyxis alaskensis RB2256 flagellar protein FliS YP_617959.1 3068741 R 317655 CDS YP_617960.1 103488399 4081117 complement(3069156..3070526) 1 NC_008048.1 flagellar hook-associated 2-like protein 3070526 4081117 Sala_2922 Sphingopyxis alaskensis RB2256 flagellar hook-associated 2-like protein YP_617960.1 3069156 R 317655 CDS YP_617961.1 103488400 4081118 complement(3070572..3071711) 1 NC_008048.1 membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB 3071711 flhB 4081118 flhB Sphingopyxis alaskensis RB2256 flagellar biosynthesis protein FlhB YP_617961.1 3070572 R 317655 CDS YP_617962.1 103488401 4081119 complement(3071715..3072494) 1 NC_008048.1 flagellar biosynthetic protein FliR 3072494 4081119 Sala_2924 Sphingopyxis alaskensis RB2256 flagellar biosynthetic protein FliR YP_617962.1 3071715 R 317655 CDS YP_617963.1 103488402 4081120 complement(3072499..3072768) 1 NC_008048.1 flagellar biosynthetic protein FliQ 3072768 4081120 Sala_2925 Sphingopyxis alaskensis RB2256 flagellar biosynthetic protein FliQ YP_617963.1 3072499 R 317655 CDS YP_617964.1 103488403 4081121 complement(3072781..3073551) 1 NC_008048.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 3073551 fliP 4081121 fliP Sphingopyxis alaskensis RB2256 flagellar biosynthesis protein FliP YP_617964.1 3072781 R 317655 CDS YP_617965.1 103488404 4081122 complement(3073541..3073819) 1 NC_008048.1 hypothetical protein 3073819 4081122 Sala_2927 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617965.1 3073541 R 317655 CDS YP_617966.1 103488405 4081123 complement(3073819..3074154) 1 NC_008048.1 flagellar motor switch FliN 3074154 4081123 Sala_2928 Sphingopyxis alaskensis RB2256 flagellar motor switch FliN YP_617966.1 3073819 R 317655 CDS YP_617967.1 103488406 4081124 complement(3074147..3075085) 1 NC_008048.1 surface presentation of antigens (SPOA) protein 3075085 4081124 Sala_2929 Sphingopyxis alaskensis RB2256 surface presentation of antigens (SPOA) protein YP_617967.1 3074147 R 317655 CDS YP_617968.1 103488407 4081125 complement(3075082..3075687) 1 NC_008048.1 flagellar basal body-associated protein FliL 3075687 4081125 Sala_2930 Sphingopyxis alaskensis RB2256 flagellar basal body-associated protein FliL YP_617968.1 3075082 R 317655 CDS YP_617969.1 103488408 4081126 complement(3075705..3076955) 1 NC_008048.1 flagellar hook-length control protein 3076955 4081126 Sala_2931 Sphingopyxis alaskensis RB2256 flagellar hook-length control protein YP_617969.1 3075705 R 317655 CDS YP_617970.1 103488409 4081127 complement(3076952..3077398) 1 NC_008048.1 hypothetical protein 3077398 4081127 Sala_2932 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617970.1 3076952 R 317655 CDS YP_617971.1 103488410 4081128 complement(3077395..3078726) 1 NC_008048.1 ATPase FliI/YscN 3078726 4081128 Sala_2933 Sphingopyxis alaskensis RB2256 ATPase FliI/YscN YP_617971.1 3077395 R 317655 CDS YP_617972.1 103488411 4080976 complement(3078723..3079322) 1 NC_008048.1 flagellar biosynthetic protein 3079322 4080976 Sala_2934 Sphingopyxis alaskensis RB2256 flagellar biosynthetic protein YP_617972.1 3078723 R 317655 CDS YP_617973.1 103488412 4080977 complement(3079315..3080346) 1 NC_008048.1 flagellar motor switch protein FliG 3080346 4080977 Sala_2935 Sphingopyxis alaskensis RB2256 flagellar motor switch protein FliG YP_617973.1 3079315 R 317655 CDS YP_617974.1 103488413 4080978 complement(3080339..3081994) 1 NC_008048.1 flagellar M-ring protein FliF 3081994 4080978 Sala_2936 Sphingopyxis alaskensis RB2256 flagellar M-ring protein FliF YP_617974.1 3080339 R 317655 CDS YP_617975.1 103488414 4080979 complement(3081998..3082351) 1 NC_008048.1 flagellar hook-basal body complex protein (FliE) 3082351 4080979 Sala_2937 Sphingopyxis alaskensis RB2256 flagellar hook-basal body complex protein (FliE) YP_617975.1 3081998 R 317655 CDS YP_617976.1 103488415 4080980 3082603..3083421 1 NC_008048.1 flagellin-like protein 3083421 4080980 Sala_2938 Sphingopyxis alaskensis RB2256 flagellin-like protein YP_617976.1 3082603 D 317655 CDS YP_617977.1 103488416 4080981 complement(3083620..3083985) 1 NC_008048.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 3083985 rplT 4080981 rplT Sphingopyxis alaskensis RB2256 50S ribosomal protein L20 YP_617977.1 3083620 R 317655 CDS YP_617978.1 103488417 4080982 complement(3083998..3084201) 1 NC_008048.1 50S ribosomal protein L35 3084201 rpmI 4080982 rpmI Sphingopyxis alaskensis RB2256 50S ribosomal protein L35 YP_617978.1 3083998 R 317655 CDS YP_617979.1 103488418 4080983 complement(3084324..3085106) 1 NC_008048.1 histidinol-phosphate phosphatase 3085106 4080983 Sala_2941 Sphingopyxis alaskensis RB2256 histidinol-phosphate phosphatase YP_617979.1 3084324 R 317655 CDS YP_617980.1 103488419 4080984 complement(3085178..3086113) 1 NC_008048.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase 3086113 4080984 Sala_2942 Sphingopyxis alaskensis RB2256 ribose-phosphate pyrophosphokinase YP_617980.1 3085178 R 317655 CDS YP_617981.1 103488420 4080985 3086293..3087963 1 NC_008048.1 NH(3)-dependent; catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 3087963 nadE 4080985 nadE Sphingopyxis alaskensis RB2256 NAD synthetase YP_617981.1 3086293 D 317655 CDS YP_617982.1 103488421 4080986 3087994..3088416 1 NC_008048.1 DoxX protein 3088416 4080986 Sala_2944 Sphingopyxis alaskensis RB2256 DoxX protein YP_617982.1 3087994 D 317655 CDS YP_617983.1 103488422 4080987 3088458..3089777 1 NC_008048.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 3089777 gltX 4080987 gltX Sphingopyxis alaskensis RB2256 glutamyl-tRNA synthetase YP_617983.1 3088458 D 317655 CDS YP_617984.1 103488423 4080988 3089940..3090668 1 NC_008048.1 TonB-like protein 3090668 4080988 Sala_2946 Sphingopyxis alaskensis RB2256 TonB-like protein YP_617984.1 3089940 D 317655 CDS YP_617985.1 103488424 4080989 3090878..3091045 1 NC_008048.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 3091045 rpmG 4080989 rpmG Sphingopyxis alaskensis RB2256 50S ribosomal protein L33 YP_617985.1 3090878 D 317655 CDS YP_617986.1 103488425 4080990 complement(3091177..3091656) 1 NC_008048.1 MarR family transcriptional regulator 3091656 4080990 Sala_2948 Sphingopyxis alaskensis RB2256 MarR family transcriptional regulator YP_617986.1 3091177 R 317655 CDS YP_617987.1 103488426 4080991 3091851..3092429 1 NC_008048.1 L-2,4-diaminobutyric acid acetyltransferase 3092429 4080991 Sala_2949 Sphingopyxis alaskensis RB2256 L-2,4-diaminobutyric acid acetyltransferase YP_617987.1 3091851 D 317655 CDS YP_617988.1 103488427 4080992 3092431..3093738 1 NC_008048.1 catalyzes the reversible formation of diaminobutyrate and 2-oxoglutarate from glutamate and L-aspartic beta-semialdehyde; diaminobutyrate--2-oxoglutarate aminotransferase 3093738 4080992 Sala_2950 Sphingopyxis alaskensis RB2256 diaminobutyrate--2-oxoglutarate aminotransferase YP_617988.1 3092431 D 317655 CDS YP_617989.1 103488428 4080993 3093755..3094168 1 NC_008048.1 N-acetyldiaminobutyrate dehydratase; catalyzes the formation of the osmoprotectant ecotoine from gamma-N-acetyl-alpha,gamma-diaminobutyric acid; L-ectoine synthase 3094168 ectC 4080993 ectC Sphingopyxis alaskensis RB2256 L-ectoine synthase YP_617989.1 3093755 D 317655 CDS YP_617990.1 103488429 4080994 3094200..3095120 1 NC_008048.1 ectoine hydroxylase 3095120 4080994 Sala_2952 Sphingopyxis alaskensis RB2256 ectoine hydroxylase YP_617990.1 3094200 D 317655 CDS YP_617991.1 103488430 4081069 3095117..3096559 1 NC_008048.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; aspartate kinase 3096559 4081069 Sala_2953 Sphingopyxis alaskensis RB2256 aspartate kinase YP_617991.1 3095117 D 317655 CDS YP_617992.1 103488431 4081070 3096584..3097822 1 NC_008048.1 major facilitator superfamily transporter 3097822 4081070 Sala_2954 Sphingopyxis alaskensis RB2256 major facilitator superfamily transporter YP_617992.1 3096584 D 317655 CDS YP_617993.1 103488432 4081071 3097826..3099160 1 NC_008048.1 general substrate transporter 3099160 4081071 Sala_2955 Sphingopyxis alaskensis RB2256 general substrate transporter YP_617993.1 3097826 D 317655 CDS YP_617994.1 103488433 4081072 complement(3099168..3099875) 1 NC_008048.1 putative transmembrane anti-sigma factor 3099875 4081072 Sala_2956 Sphingopyxis alaskensis RB2256 putative transmembrane anti-sigma factor YP_617994.1 3099168 R 317655 CDS YP_617995.1 103488434 4081073 complement(3099872..3100360) 1 NC_008048.1 ECF subfamily RNA polymerase sigma-24 factor 3100360 4081073 Sala_2957 Sphingopyxis alaskensis RB2256 ECF subfamily RNA polymerase sigma-24 factor YP_617995.1 3099872 R 317655 CDS YP_617996.1 103488435 4081074 3100469..3101740 1 NC_008048.1 peptidase S8/S53 subtilisin kexin sedolisin 3101740 4081074 Sala_2958 Sphingopyxis alaskensis RB2256 peptidase S8/S53 subtilisin kexin sedolisin YP_617996.1 3100469 D 317655 CDS YP_617997.1 103488436 4081075 3101837..3102766 1 NC_008048.1 hypothetical protein 3102766 4081075 Sala_2959 Sphingopyxis alaskensis RB2256 hypothetical protein YP_617997.1 3101837 D 317655 CDS YP_617998.1 103488437 4081076 3102820..3103569 1 NC_008048.1 LuxR family transcriptional regulator 3103569 4081076 Sala_2960 Sphingopyxis alaskensis RB2256 LuxR family transcriptional regulator YP_617998.1 3102820 D 317655 CDS YP_617999.1 103488438 4081077 complement(3103736..3104788) 1 NC_008048.1 putative acyl-carrier protein 3104788 4081077 Sala_2961 Sphingopyxis alaskensis RB2256 putative acyl-carrier protein YP_617999.1 3103736 R 317655 CDS YP_618000.1 103488439 4081078 complement(3104785..3106986) 1 NC_008048.1 transketolase, central region 3106986 4081078 Sala_2962 Sphingopyxis alaskensis RB2256 transketolase, central region YP_618000.1 3104785 R 317655 CDS YP_618001.1 103488440 4081079 3107153..3107863 1 NC_008048.1 hypothetical protein 3107863 4081079 Sala_2963 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618001.1 3107153 D 317655 CDS YP_618002.1 103488441 4081080 3107860..3109089 1 NC_008048.1 hypothetical protein 3109089 4081080 Sala_2964 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618002.1 3107860 D 317655 CDS YP_618003.1 103488442 4081081 3109145..3110041 1 NC_008048.1 ATPase 3110041 4081081 Sala_2965 Sphingopyxis alaskensis RB2256 ATPase YP_618003.1 3109145 D 317655 CDS YP_618004.1 103488443 4081082 3110038..3111348 1 NC_008048.1 hypothetical protein 3111348 4081082 Sala_2966 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618004.1 3110038 D 317655 CDS YP_618005.1 103488444 4081083 3111345..3112388 1 NC_008048.1 hypothetical protein 3112388 4081083 Sala_2967 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618005.1 3111345 D 317655 CDS YP_618006.1 103488445 4081084 3112385..3113251 1 NC_008048.1 RDD domain-containing protein 3113251 4081084 Sala_2968 Sphingopyxis alaskensis RB2256 RDD domain-containing protein YP_618006.1 3112385 D 317655 CDS YP_618007.1 103488446 4081085 3113238..3113945 1 NC_008048.1 nitroreductase 3113945 4081085 Sala_2969 Sphingopyxis alaskensis RB2256 nitroreductase YP_618007.1 3113238 D 317655 CDS YP_618008.1 103488447 4081086 3113942..3114445 1 NC_008048.1 hypothetical protein 3114445 4081086 Sala_2970 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618008.1 3113942 D 317655 CDS YP_618009.1 103488448 4081087 complement(3114575..3115075) 1 NC_008048.1 hypothetical protein 3115075 4081087 Sala_2971 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618009.1 3114575 R 317655 CDS YP_618010.1 103488449 4081088 3115117..3117693 1 NC_008048.1 DNA gyrase subunit B 3117693 4081088 Sala_2972 Sphingopyxis alaskensis RB2256 DNA gyrase subunit B YP_618010.1 3115117 D 317655 CDS YP_618011.1 103488450 4083056 3117794..3118198 1 NC_008048.1 rare lipoprotein A 3118198 4083056 Sala_2973 Sphingopyxis alaskensis RB2256 rare lipoprotein A YP_618011.1 3117794 D 317655 CDS YP_618012.1 103488451 4083057 complement(3118362..3118868) 1 NC_008048.1 hypothetical protein 3118868 4083057 Sala_2974 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618012.1 3118362 R 317655 CDS YP_618013.1 103488452 4083058 3118996..3119403 1 NC_008048.1 protein-methionine-S-oxide reductase 3119403 4083058 Sala_2975 Sphingopyxis alaskensis RB2256 protein-methionine-S-oxide reductase YP_618013.1 3118996 D 317655 CDS YP_618014.1 103488453 4083059 3119435..3121633 1 NC_008048.1 penicillin-binding protein 1A 3121633 4083059 Sala_2976 Sphingopyxis alaskensis RB2256 penicillin-binding protein 1A YP_618014.1 3119435 D 317655 CDS YP_618015.1 103488454 4083060 complement(3121640..3122323) 1 NC_008048.1 hypothetical protein 3122323 4083060 Sala_2977 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618015.1 3121640 R 317655 CDS YP_618016.1 103488455 4083061 complement(3122352..3122798) 1 NC_008048.1 hypothetical protein 3122798 4083061 Sala_2978 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618016.1 3122352 R 317655 CDS YP_618017.1 103488456 4083062 complement(3122801..3123448) 1 NC_008048.1 electron transport protein SCO1/SenC 3123448 4083062 Sala_2979 Sphingopyxis alaskensis RB2256 electron transport protein SCO1/SenC YP_618017.1 3122801 R 317655 CDS YP_618018.1 103488457 4083063 3123537..3124163 1 NC_008048.1 ankyrin 3124163 4083063 Sala_2980 Sphingopyxis alaskensis RB2256 ankyrin YP_618018.1 3123537 D 317655 CDS YP_618019.1 103488458 4083064 3124219..3125493 1 NC_008048.1 3,4-dihydroxy-2-butanone 4-phosphate synthase 3125493 4083064 Sala_2981 Sphingopyxis alaskensis RB2256 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_618019.1 3124219 D 317655 CDS YP_618020.1 103488459 4083065 3125493..3125918 1 NC_008048.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 3125918 ribH 4083065 ribH Sphingopyxis alaskensis RB2256 6,7-dimethyl-8-ribityllumazine synthase YP_618020.1 3125493 D 317655 CDS YP_618021.1 103488460 4083066 complement(3125893..3126303) 1 NC_008048.1 hypothetical protein 3126303 4083066 Sala_2983 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618021.1 3125893 R 317655 CDS YP_618022.1 103488461 4083067 complement(3126615..3127700) 1 NC_008048.1 NADH:flavin oxidoreductase 3127700 4083067 Sala_2984 Sphingopyxis alaskensis RB2256 NADH:flavin oxidoreductase YP_618022.1 3126615 R 317655 CDS YP_618023.1 103488462 4083068 3127740..3128567 1 NC_008048.1 hypothetical protein 3128567 4083068 Sala_2985 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618023.1 3127740 D 317655 CDS YP_618024.1 103488463 4083069 3128632..3128868 1 NC_008048.1 hypothetical protein 3128868 4083069 Sala_2986 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618024.1 3128632 D 317655 CDS YP_618025.1 103488464 4083070 3128865..3130724 1 NC_008048.1 ferrous iron transport protein B 3130724 4083070 Sala_2987 Sphingopyxis alaskensis RB2256 ferrous iron transport protein B YP_618025.1 3128865 D 317655 CDS YP_618026.1 103488465 4083071 3130758..3131279 1 NC_008048.1 single-strand binding protein 3131279 4083071 Sala_2988 Sphingopyxis alaskensis RB2256 single-strand binding protein YP_618026.1 3130758 D 317655 CDS YP_618027.1 103488466 4083072 3131292..3131771 1 NC_008048.1 hypothetical protein 3131771 4083072 Sala_2989 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618027.1 3131292 D 317655 CDS YP_618028.1 103488467 4083073 complement(3131768..3132385) 1 NC_008048.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 3132385 4083073 Sala_2990 Sphingopyxis alaskensis RB2256 riboflavin synthase subunit alpha YP_618028.1 3131768 R 317655 CDS YP_618029.1 103488468 4083074 complement(3132395..3133372) 1 NC_008048.1 riboflavin biosynthesis protein RibD 3133372 4083074 Sala_2991 Sphingopyxis alaskensis RB2256 riboflavin biosynthesis protein RibD YP_618029.1 3132395 R 317655 CDS YP_618030.1 103488469 4082936 complement(3133374..3133838) 1 NC_008048.1 hypothetical protein 3133838 4082936 Sala_2992 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618030.1 3133374 R 317655 CDS YP_618031.1 103488470 4082937 complement(3134117..3134578) 1 NC_008048.1 4-hydroxybenzoyl-CoA thioesterase 3134578 4082937 Sala_2993 Sphingopyxis alaskensis RB2256 4-hydroxybenzoyl-CoA thioesterase YP_618031.1 3134117 R 317655 CDS YP_618032.1 103488471 4082938 complement(3134588..3136414) 1 NC_008048.1 peptidase M24 3136414 4082938 Sala_2994 Sphingopyxis alaskensis RB2256 peptidase M24 YP_618032.1 3134588 R 317655 CDS YP_618033.1 103488472 4082939 3136497..3138644 1 NC_008048.1 oligopeptidase B 3138644 4082939 Sala_2995 Sphingopyxis alaskensis RB2256 oligopeptidase B YP_618033.1 3136497 D 317655 CDS YP_618034.1 103488473 4082940 3138741..3140180 1 NC_008048.1 beta-lactamase 3140180 4082940 Sala_2996 Sphingopyxis alaskensis RB2256 beta-lactamase YP_618034.1 3138741 D 317655 CDS YP_618035.1 103488474 4082941 complement(3140165..3140776) 1 NC_008048.1 HAD family hydrolase 3140776 4082941 Sala_2997 Sphingopyxis alaskensis RB2256 HAD family hydrolase YP_618035.1 3140165 R 317655 CDS YP_618036.1 103488475 4082942 complement(3140874..3140999) 1 NC_008048.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif; 50S ribosomal protein L36 3140999 rpmJ 4082942 rpmJ Sphingopyxis alaskensis RB2256 50S ribosomal protein L36 YP_618036.1 3140874 R 317655 CDS YP_618037.1 103488476 4082943 complement(3141195..3142649) 1 NC_008048.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 3142649 4082943 Sala_2999 Sphingopyxis alaskensis RB2256 RNA polymerase factor sigma-54 YP_618037.1 3141195 R 317655 CDS YP_618038.1 103488477 4082944 complement(3142793..3143608) 1 NC_008048.1 ABC transporter 3143608 4082944 Sala_3000 Sphingopyxis alaskensis RB2256 ABC transporter YP_618038.1 3142793 R 317655 CDS YP_618039.1 103488478 4082945 complement(3143714..3145096) 1 NC_008048.1 phosphomannomutase 3145096 4082945 Sala_3001 Sphingopyxis alaskensis RB2256 phosphomannomutase YP_618039.1 3143714 R 317655 CDS YP_618040.1 103488479 4082946 complement(3145125..3146006) 1 NC_008048.1 chromosome partitioning ATPase 3146006 4082946 Sala_3002 Sphingopyxis alaskensis RB2256 chromosome partitioning ATPase YP_618040.1 3145125 R 317655 CDS YP_618041.1 103488480 4082947 3146034..3146873 1 NC_008048.1 pantoate--beta-alanine ligase 3146873 4082947 Sala_3003 Sphingopyxis alaskensis RB2256 pantoate--beta-alanine ligase YP_618041.1 3146034 D 317655 CDS YP_618042.1 103488481 4082948 3146992..3147327 1 NC_008048.1 hypothetical protein 3147327 4082948 Sala_3004 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618042.1 3146992 D 317655 CDS YP_618043.1 103488482 4082949 complement(3147394..3148545) 1 NC_008048.1 hypothetical protein 3148545 4082949 Sala_3005 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618043.1 3147394 R 317655 CDS YP_618044.1 103488483 4082950 complement(3148549..3149013) 1 NC_008048.1 endoribonuclease L-PSP 3149013 4082950 Sala_3006 Sphingopyxis alaskensis RB2256 endoribonuclease L-PSP YP_618044.1 3148549 R 317655 CDS YP_618045.1 103488484 4082951 complement(3149026..3149667) 1 NC_008048.1 hypothetical protein 3149667 4082951 Sala_3007 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618045.1 3149026 R 317655 CDS YP_618046.1 103488485 4082952 complement(3149664..3149927) 1 NC_008048.1 hypothetical protein 3149927 4082952 Sala_3008 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618046.1 3149664 R 317655 CDS YP_618047.1 103488486 4082953 3150015..3150377 1 NC_008048.1 response regulator receiver protein 3150377 4082953 Sala_3009 Sphingopyxis alaskensis RB2256 response regulator receiver protein YP_618047.1 3150015 D 317655 CDS YP_618048.1 103488487 4082954 complement(3150547..3151710) 1 NC_008048.1 acyl-CoA dehydrogenase-like protein 3151710 4082954 Sala_3010 Sphingopyxis alaskensis RB2256 acyl-CoA dehydrogenase-like protein YP_618048.1 3150547 R 317655 CDS YP_618049.1 103488488 4082955 complement(3151728..3152789) 1 NC_008048.1 aspartyl/asparaginyl beta-hydroxylase 3152789 4082955 Sala_3011 Sphingopyxis alaskensis RB2256 aspartyl/asparaginyl beta-hydroxylase YP_618049.1 3151728 R 317655 CDS YP_618050.1 103488489 4082842 complement(3152830..3155142) 1 NC_008048.1 UvrD/REP helicase 3155142 4082842 Sala_3012 Sphingopyxis alaskensis RB2256 UvrD/REP helicase YP_618050.1 3152830 R 317655 CDS YP_618051.1 103488490 4082843 3155227..3155511 1 NC_008048.1 hypothetical protein 3155511 4082843 Sala_3013 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618051.1 3155227 D 317655 CDS YP_618052.1 103488491 4082846 complement(3155863..3157629) 1 NC_008048.1 single-stranded-DNA-specific exonuclease RecJ 3157629 4082846 Sala_3014 Sphingopyxis alaskensis RB2256 single-stranded-DNA-specific exonuclease RecJ YP_618052.1 3155863 R 317655 CDS YP_618053.1 103488492 4082847 complement(3157626..3159353) 1 NC_008048.1 membrane-flanked domain-containing protein 3159353 4082847 Sala_3015 Sphingopyxis alaskensis RB2256 membrane-flanked domain-containing protein YP_618053.1 3157626 R 317655 CDS YP_618054.1 103488493 4082848 complement(3159693..3161654) 1 NC_008048.1 beta-lactamase-like protein 3161654 4082848 Sala_3016 Sphingopyxis alaskensis RB2256 beta-lactamase-like protein YP_618054.1 3159693 R 317655 CDS YP_618055.1 103488494 4082849 3161717..3162205 1 NC_008048.1 multimeric flavodoxin WrbA 3162205 4082849 Sala_3017 Sphingopyxis alaskensis RB2256 multimeric flavodoxin WrbA YP_618055.1 3161717 D 317655 CDS YP_618056.1 103488495 4082850 complement(3162330..3163361) 1 NC_008048.1 DNA polymerase III subunit delta 3163361 4082850 Sala_3018 Sphingopyxis alaskensis RB2256 DNA polymerase III subunit delta YP_618056.1 3162330 R 317655 CDS YP_618057.1 103488496 4082851 complement(3163358..3163906) 1 NC_008048.1 hypothetical protein 3163906 4082851 Sala_3019 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618057.1 3163358 R 317655 CDS YP_618058.1 103488497 4082852 complement(3164036..3166585) 1 NC_008048.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 3166585 leuS 4082852 leuS Sphingopyxis alaskensis RB2256 leucyl-tRNA synthetase YP_618058.1 3164036 R 317655 CDS YP_618059.1 103488498 4082853 complement(3166639..3167100) 1 NC_008048.1 hypothetical protein 3167100 4082853 Sala_3021 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618059.1 3166639 R 317655 CDS YP_618060.1 103488499 4082854 3167379..3168092 1 NC_008048.1 hypothetical protein 3168092 4082854 Sala_3022 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618060.1 3167379 D 317655 CDS YP_618061.1 103488500 4082855 complement(3168065..3168691) 1 NC_008048.1 thiamine monophosphate synthase 3168691 4082855 Sala_3023 Sphingopyxis alaskensis RB2256 thiamine monophosphate synthase YP_618061.1 3168065 R 317655 CDS YP_618062.1 103488501 4082856 3168748..3169410 1 NC_008048.1 hypothetical protein 3169410 4082856 Sala_3024 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618062.1 3168748 D 317655 CDS YP_618063.1 103488502 4082857 3169757..3172177 1 NC_008048.1 DEAD/DEAH box helicase 3172177 4082857 Sala_3026 Sphingopyxis alaskensis RB2256 DEAD/DEAH box helicase YP_618063.1 3169757 D 317655 CDS YP_618064.1 103488503 4082858 3172263..3173300 1 NC_008048.1 hypothetical protein 3173300 4082858 Sala_3027 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618064.1 3172263 D 317655 CDS YP_618065.1 103488504 4083036 3173340..3174056 1 NC_008048.1 metallophosphoesterase 3174056 4083036 Sala_3028 Sphingopyxis alaskensis RB2256 metallophosphoesterase YP_618065.1 3173340 D 317655 CDS YP_618066.1 103488505 4083037 3174203..3176962 1 NC_008048.1 TonB-dependent receptor 3176962 4083037 Sala_3029 Sphingopyxis alaskensis RB2256 TonB-dependent receptor YP_618066.1 3174203 D 317655 CDS YP_618067.1 103488506 4083038 3177200..3177643 1 NC_008048.1 succinate dehydrogenase, cytochrome b subunit 3177643 4083038 Sala_3030 Sphingopyxis alaskensis RB2256 succinate dehydrogenase, cytochrome b subunit YP_618067.1 3177200 D 317655 CDS YP_618068.1 103488507 4083039 3177636..3178040 1 NC_008048.1 succinate dehydrogenase, cytochrome b subunit 3178040 4083039 Sala_3031 Sphingopyxis alaskensis RB2256 succinate dehydrogenase, cytochrome b subunit YP_618068.1 3177636 D 317655 CDS YP_618069.1 103488508 4083040 3178042..3179856 1 NC_008048.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 3179856 sdhA 4083040 sdhA Sphingopyxis alaskensis RB2256 succinate dehydrogenase flavoprotein subunit YP_618069.1 3178042 D 317655 CDS YP_618070.1 103488509 4083041 complement(3180084..3181139) 1 NC_008048.1 LacI family transcriptional regulator 3181139 4083041 Sala_3033 Sphingopyxis alaskensis RB2256 LacI family transcriptional regulator YP_618070.1 3180084 R 317655 CDS YP_618071.1 103488510 4083042 3181350..3182003 1 NC_008048.1 hypothetical protein 3182003 4083042 Sala_3034 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618071.1 3181350 D 317655 CDS YP_618072.1 103488511 4083043 3182005..3182760 1 NC_008048.1 2-deoxy-D-gluconate 3-dehydrogenase 3182760 4083043 Sala_3035 Sphingopyxis alaskensis RB2256 2-deoxy-D-gluconate 3-dehydrogenase YP_618072.1 3182005 D 317655 CDS YP_618073.1 103488512 4083044 3182873..3183901 1 NC_008048.1 PfkB protein 3183901 4083044 Sala_3036 Sphingopyxis alaskensis RB2256 PfkB protein YP_618073.1 3182873 D 317655 CDS YP_618074.1 103488513 4083045 3183888..3185327 1 NC_008048.1 carboxylesterase 3185327 4083045 Sala_3037 Sphingopyxis alaskensis RB2256 carboxylesterase YP_618074.1 3183888 D 317655 CDS YP_618075.1 103488514 4083046 complement(3185434..3186405) 1 NC_008048.1 hypothetical protein 3186405 4083046 Sala_3038 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618075.1 3185434 R 317655 CDS YP_618076.1 103488515 4083047 complement(3186402..3186806) 1 NC_008048.1 cupin 3186806 4083047 Sala_3039 Sphingopyxis alaskensis RB2256 cupin YP_618076.1 3186402 R 317655 CDS YP_618077.1 103488516 4083048 complement(3186803..3188182) 1 NC_008048.1 pectate lyase 3188182 4083048 Sala_3040 Sphingopyxis alaskensis RB2256 pectate lyase YP_618077.1 3186803 R 317655 CDS YP_618078.1 103488517 4083049 3188443..3191238 1 NC_008048.1 TonB-dependent receptor 3191238 4083049 Sala_3041 Sphingopyxis alaskensis RB2256 TonB-dependent receptor YP_618078.1 3188443 D 317655 CDS YP_618079.1 103488518 4083050 3191320..3192933 1 NC_008048.1 twin-arginine translocation pathway signal 3192933 4083050 Sala_3042 Sphingopyxis alaskensis RB2256 twin-arginine translocation pathway signal YP_618079.1 3191320 D 317655 CDS YP_618080.1 103488519 4083051 complement(3192930..3194432) 1 NC_008048.1 altronate dehydratase 3194432 4083051 Sala_3043 Sphingopyxis alaskensis RB2256 altronate dehydratase YP_618080.1 3192930 R 317655 CDS YP_618081.1 103488520 4083052 3194476..3195258 1 NC_008048.1 2-keto-4-pentenoate hydratase 3195258 4083052 Sala_3044 Sphingopyxis alaskensis RB2256 2-keto-4-pentenoate hydratase YP_618081.1 3194476 D 317655 CDS YP_618082.1 103488521 4083053 3195281..3196588 1 NC_008048.1 major facilitator superfamily transporter 3196588 4083053 Sala_3045 Sphingopyxis alaskensis RB2256 major facilitator superfamily transporter YP_618082.1 3195281 D 317655 CDS YP_618083.1 103488522 4083054 3196593..3198005 1 NC_008048.1 catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate; functions in glucuronic and galacturonic metabolism; glucuronate isomerase 3198005 4083054 Sala_3046 Sphingopyxis alaskensis RB2256 glucuronate isomerase YP_618083.1 3196593 D 317655 CDS YP_618084.1 103488523 4083055 3198038..3199330 1 NC_008048.1 mannitol dehydrogenase-like protein 3199330 4083055 Sala_3047 Sphingopyxis alaskensis RB2256 mannitol dehydrogenase-like protein YP_618084.1 3198038 D 317655 CDS YP_618085.1 103488524 4082897 complement(3199432..3200364) 1 NC_008048.1 LysR family transcriptional regulator 3200364 4082897 Sala_3048 Sphingopyxis alaskensis RB2256 LysR family transcriptional regulator YP_618085.1 3199432 R 317655 CDS YP_618086.1 103488525 4082898 3200419..3201912 1 NC_008048.1 methylmalonate-semialdehyde dehydrogenase 3201912 4082898 Sala_3049 Sphingopyxis alaskensis RB2256 methylmalonate-semialdehyde dehydrogenase YP_618086.1 3200419 D 317655 CDS YP_618087.1 103488526 4082899 3201977..3202486 1 NC_008048.1 hypothetical protein 3202486 4082899 Sala_3050 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618087.1 3201977 D 317655 CDS YP_618088.1 103488527 4082900 3202512..3202814 1 NC_008048.1 hypothetical protein 3202814 4082900 Sala_3051 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618088.1 3202512 D 317655 CDS YP_618089.1 103488528 4082901 3202819..3203211 1 NC_008048.1 endoribonuclease L-PSP 3203211 4082901 Sala_3052 Sphingopyxis alaskensis RB2256 endoribonuclease L-PSP YP_618089.1 3202819 D 317655 CDS YP_618090.1 103488529 4082902 3203208..3204353 1 NC_008048.1 Acyl-CoA dehydrogenase 3204353 4082902 Sala_3053 Sphingopyxis alaskensis RB2256 Acyl-CoA dehydrogenase YP_618090.1 3203208 D 317655 CDS YP_618091.1 103488530 4082903 3204523..3205581 1 NC_008048.1 enoyl-CoA hydratase/isomerase 3205581 4082903 Sala_3054 Sphingopyxis alaskensis RB2256 enoyl-CoA hydratase/isomerase YP_618091.1 3204523 D 317655 CDS YP_618092.1 103488531 4082904 3205657..3206439 1 NC_008048.1 enoyl-CoA hydratase/isomerase 3206439 4082904 Sala_3055 Sphingopyxis alaskensis RB2256 enoyl-CoA hydratase/isomerase YP_618092.1 3205657 D 317655 CDS YP_618093.1 103488532 4082905 3206592..3207467 1 NC_008048.1 3-hydroxyisobutyrate dehydrogenase 3207467 4082905 Sala_3056 Sphingopyxis alaskensis RB2256 3-hydroxyisobutyrate dehydrogenase YP_618093.1 3206592 D 317655 CDS YP_618094.1 103488533 4082906 3207538..3208074 1 NC_008048.1 inorganic diphosphatase 3208074 4082906 Sala_3057 Sphingopyxis alaskensis RB2256 inorganic diphosphatase YP_618094.1 3207538 D 317655 CDS YP_618095.1 103488534 4082907 complement(3208086..3209393) 1 NC_008048.1 mechanosensitive ion channel protein MscS 3209393 4082907 Sala_3058 Sphingopyxis alaskensis RB2256 mechanosensitive ion channel protein MscS YP_618095.1 3208086 R 317655 CDS YP_618096.1 103488535 4082908 complement(3209390..3210592) 1 NC_008048.1 cystathionine beta-lyase 3210592 4082908 Sala_3059 Sphingopyxis alaskensis RB2256 cystathionine beta-lyase YP_618096.1 3209390 R 317655 CDS YP_618097.1 103488536 4082909 complement(3210613..3211962) 1 NC_008048.1 chromate transporter 3211962 4082909 Sala_3060 Sphingopyxis alaskensis RB2256 chromate transporter YP_618097.1 3210613 R 317655 CDS YP_618098.1 103488537 4082910 complement(3212114..3212953) 1 NC_008048.1 3-mercaptopyruvate sulfurtransferase 3212953 4082910 Sala_3061 Sphingopyxis alaskensis RB2256 3-mercaptopyruvate sulfurtransferase YP_618098.1 3212114 R 317655 CDS YP_618099.1 103488538 4082911 complement(3213138..3214430) 1 NC_008048.1 hypothetical protein 3214430 4082911 Sala_3062 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618099.1 3213138 R 317655 CDS YP_618100.1 103488539 4082912 3214550..3215020 1 NC_008048.1 NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 3215020 4082912 Sala_3063 Sphingopyxis alaskensis RB2256 7-cyano-7-deazaguanine reductase YP_618100.1 3214550 D 317655 CDS YP_618101.1 103488540 4082913 3215066..3215476 1 NC_008048.1 thioesterase superfamily protein 3215476 4082913 Sala_3064 Sphingopyxis alaskensis RB2256 thioesterase superfamily protein YP_618101.1 3215066 D 317655 CDS YP_618102.1 103488541 4082914 complement(3215487..3215744) 1 NC_008048.1 hypothetical protein 3215744 4082914 Sala_3065 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618102.1 3215487 R 317655 CDS YP_618103.1 103488542 4082915 complement(3215778..3216272) 1 NC_008048.1 transposase, IS4 3216272 4082915 Sala_3066 Sphingopyxis alaskensis RB2256 transposase, IS4 YP_618103.1 3215778 R 317655 CDS YP_618104.1 103488543 4083075 complement(3216609..3216848) 1 NC_008048.1 hypothetical protein 3216848 4083075 Sala_3067 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618104.1 3216609 R 317655 CDS YP_618105.1 103488544 4083076 complement(3217026..3219059) 1 NC_008048.1 3-hydroxyacyl-CoA dehydrogenase 3219059 4083076 Sala_3068 Sphingopyxis alaskensis RB2256 3-hydroxyacyl-CoA dehydrogenase YP_618105.1 3217026 R 317655 CDS YP_618106.1 103488545 4083077 complement(3219183..3220385) 1 NC_008048.1 beta-lactamase 3220385 4083077 Sala_3069 Sphingopyxis alaskensis RB2256 beta-lactamase YP_618106.1 3219183 R 317655 CDS YP_618107.1 103488546 4083078 complement(3220396..3221199) 1 NC_008048.1 short-chain dehydrogenase/reductase SDR 3221199 4083078 Sala_3070 Sphingopyxis alaskensis RB2256 short-chain dehydrogenase/reductase SDR YP_618107.1 3220396 R 317655 CDS YP_618108.1 103488547 4083079 complement(3221199..3221975) 1 NC_008048.1 short-chain dehydrogenase/reductase SDR 3221975 4083079 Sala_3071 Sphingopyxis alaskensis RB2256 short-chain dehydrogenase/reductase SDR YP_618108.1 3221199 R 317655 CDS YP_618109.1 103488548 4083080 complement(3221972..3223138) 1 NC_008048.1 aminoglycoside phosphotransferase 3223138 4083080 Sala_3072 Sphingopyxis alaskensis RB2256 aminoglycoside phosphotransferase YP_618109.1 3221972 R 317655 CDS YP_618110.1 103488549 4083081 complement(3223188..3224279) 1 NC_008048.1 zinc-binding alcohol dehydrogenase 3224279 4083081 Sala_3073 Sphingopyxis alaskensis RB2256 zinc-binding alcohol dehydrogenase YP_618110.1 3223188 R 317655 CDS YP_618111.1 103488550 4083082 complement(3224331..3225620) 1 NC_008048.1 acyl-CoA dehydrogenase-like protein 3225620 4083082 Sala_3074 Sphingopyxis alaskensis RB2256 acyl-CoA dehydrogenase-like protein YP_618111.1 3224331 R 317655 CDS YP_618112.1 103488551 4083083 complement(3225733..3227181) 1 NC_008048.1 Na+/melibiose symporter-like protein 3227181 4083083 Sala_3075 Sphingopyxis alaskensis RB2256 Na+/melibiose symporter-like protein YP_618112.1 3225733 R 317655 CDS YP_618113.1 103488552 4083084 complement(3227190..3228047) 1 NC_008048.1 short-chain dehydrogenase/reductase SDR 3228047 4083084 Sala_3076 Sphingopyxis alaskensis RB2256 short-chain dehydrogenase/reductase SDR YP_618113.1 3227190 R 317655 CDS YP_618114.1 103488553 4083085 3228218..3229399 1 NC_008048.1 acyl-CoA dehydrogenase-like protein 3229399 4083085 Sala_3077 Sphingopyxis alaskensis RB2256 acyl-CoA dehydrogenase-like protein YP_618114.1 3228218 D 317655 CDS YP_618115.1 103488554 4083086 3229508..3230626 1 NC_008048.1 acyl-CoA dehydrogenase-like protein 3230626 4083086 Sala_3078 Sphingopyxis alaskensis RB2256 acyl-CoA dehydrogenase-like protein YP_618115.1 3229508 D 317655 CDS YP_618116.1 103488555 4083087 3230783..3231586 1 NC_008048.1 short-chain dehydrogenase/reductase SDR 3231586 4083087 Sala_3079 Sphingopyxis alaskensis RB2256 short-chain dehydrogenase/reductase SDR YP_618116.1 3230783 D 317655 CDS YP_618117.1 103488556 4083088 3231680..3232198 1 NC_008048.1 hypothetical protein 3232198 4083088 Sala_3080 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618117.1 3231680 D 317655 CDS YP_618118.1 103488557 4083089 complement(3232309..3234978) 1 NC_008048.1 phosphoenolpyruvate carboxylase 3234978 4083089 Sala_3081 Sphingopyxis alaskensis RB2256 phosphoenolpyruvate carboxylase YP_618118.1 3232309 R 317655 CDS YP_618119.1 103488558 4083090 complement(3235044..3235469) 1 NC_008048.1 lipoprotein-related protein 3235469 4083090 Sala_3082 Sphingopyxis alaskensis RB2256 lipoprotein-related protein YP_618119.1 3235044 R 317655 CDS YP_618120.1 103488559 4083091 complement(3235551..3236117) 1 NC_008048.1 HNH endonuclease 3236117 4083091 Sala_3083 Sphingopyxis alaskensis RB2256 HNH endonuclease YP_618120.1 3235551 R 317655 CDS YP_618121.1 103488560 4083092 3236276..3237139 1 NC_008048.1 glutamyl-tRNA synthetase 3237139 4083092 Sala_3084 Sphingopyxis alaskensis RB2256 glutamyl-tRNA synthetase YP_618121.1 3236276 D 317655 CDS YP_618122.1 103488561 4083093 3237149..3237373 1 NC_008048.1 hypothetical protein 3237373 4083093 Sala_3085 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618122.1 3237149 D 317655 CDS YP_618123.1 103488562 4083094 3237510..3238091 1 NC_008048.1 cobalamin adenosyltransferase 3238091 4083094 Sala_3086 Sphingopyxis alaskensis RB2256 cobalamin adenosyltransferase YP_618123.1 3237510 D 317655 CDS YP_618124.1 103488563 4082823 3238300..3239571 1 NC_008048.1 hypothetical protein 3239571 4082823 Sala_3087 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618124.1 3238300 D 317655 CDS YP_618125.1 103488564 4082824 3239573..3240559 1 NC_008048.1 hypothetical protein 3240559 4082824 Sala_3088 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618125.1 3239573 D 317655 CDS YP_618126.1 103488565 4082825 3240724..3241590 1 NC_008048.1 3-hydroxybutyryl-CoA dehydrogenase 3241590 4082825 Sala_3089 Sphingopyxis alaskensis RB2256 3-hydroxybutyryl-CoA dehydrogenase YP_618126.1 3240724 D 317655 CDS YP_618127.1 103488566 4082826 3241661..3242155 1 NC_008048.1 hypothetical protein 3242155 4082826 Sala_3090 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618127.1 3241661 D 317655 CDS YP_618128.1 103488567 4082827 complement(3242158..3242496) 1 NC_008048.1 hypothetical protein 3242496 4082827 Sala_3091 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618128.1 3242158 R 317655 CDS YP_618129.1 103488568 4082828 complement(3242493..3243104) 1 NC_008048.1 hypothetical protein 3243104 4082828 Sala_3092 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618129.1 3242493 R 317655 CDS YP_618130.1 103488569 4082829 complement(3243206..3244459) 1 NC_008048.1 Na+ dependent nucleoside transporter-like protein 3244459 4082829 Sala_3093 Sphingopyxis alaskensis RB2256 Na+ dependent nucleoside transporter-like protein YP_618130.1 3243206 R 317655 CDS YP_618131.1 103488570 4082830 3244486..3245262 1 NC_008048.1 hypothetical protein 3245262 4082830 Sala_3094 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618131.1 3244486 D 317655 CDS YP_618132.1 103488571 4082831 3245259..3246167 1 NC_008048.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 3246167 4082831 Sala_3095 Sphingopyxis alaskensis RB2256 acetylglutamate kinase YP_618132.1 3245259 D 317655 CDS YP_618133.1 103488572 4082832 3246204..3246512 1 NC_008048.1 hypothetical protein 3246512 4082832 Sala_3096 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618133.1 3246204 D 317655 CDS YP_618134.1 103488573 4082833 3246516..3247424 1 NC_008048.1 methylenetetrahydrofolate dehydrogenase (NADP+) 3247424 4082833 Sala_3097 Sphingopyxis alaskensis RB2256 methylenetetrahydrofolate dehydrogenase (NADP+) YP_618134.1 3246516 D 317655 CDS YP_618135.1 103488574 4082834 3247424..3248098 1 NC_008048.1 hypothetical protein 3248098 4082834 Sala_3098 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618135.1 3247424 D 317655 CDS YP_618136.1 103488575 4082835 3248095..3248724 1 NC_008048.1 multiple antibiotic resistance (MarC)-like proteins 3248724 4082835 Sala_3099 Sphingopyxis alaskensis RB2256 multiple antibiotic resistance (MarC)-like proteins YP_618136.1 3248095 D 317655 CDS YP_618137.1 103488576 4082836 complement(3248841..3249092) 1 NC_008048.1 hypothetical protein 3249092 4082836 Sala_3100 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618137.1 3248841 R 317655 CDS YP_618138.1 103488577 4082837 complement(3249126..3249818) 1 NC_008048.1 OmpA/MotB protein 3249818 4082837 Sala_3101 Sphingopyxis alaskensis RB2256 OmpA/MotB protein YP_618138.1 3249126 R 317655 CDS YP_618139.1 103488578 4082838 3249956..3251356 1 NC_008048.1 hypothetical protein 3251356 4082838 Sala_3102 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618139.1 3249956 D 317655 CDS YP_618140.1 103488579 4082839 complement(3251365..3251928) 1 NC_008048.1 hypothetical protein 3251928 4082839 Sala_3103 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618140.1 3251365 R 317655 CDS YP_618141.1 103488580 4082840 complement(3252053..3253288) 1 NC_008048.1 phosphoribosylamine--glycine ligase 3253288 4082840 Sala_3104 Sphingopyxis alaskensis RB2256 phosphoribosylamine--glycine ligase YP_618141.1 3252053 R 317655 CDS YP_618142.1 103488581 4082841 3253329..3254756 1 NC_008048.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 3254756 xseA 4082841 xseA Sphingopyxis alaskensis RB2256 exodeoxyribonuclease VII large subunit YP_618142.1 3253329 D 317655 CDS YP_618143.1 103488582 4082693 3254834..3255046 1 NC_008048.1 hypothetical protein 3255046 4082693 Sala_3106 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618143.1 3254834 D 317655 CDS YP_618144.1 103488583 4082694 3255043..3255954 1 NC_008048.1 peptidase M23B 3255954 4082694 Sala_3107 Sphingopyxis alaskensis RB2256 peptidase M23B YP_618144.1 3255043 D 317655 CDS YP_618145.1 103488584 4082695 3256229..3259291 1 NC_008048.1 TonB-dependent receptor 3259291 4082695 Sala_3108 Sphingopyxis alaskensis RB2256 TonB-dependent receptor YP_618145.1 3256229 D 317655 CDS YP_618146.1 103488585 4082696 complement(3259420..3260445) 1 NC_008048.1 hypothetical protein 3260445 4082696 Sala_3109 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618146.1 3259420 R 317655 CDS YP_618147.1 103488586 4082697 3260474..3261673 1 NC_008048.1 aspartyl/asparaginyl beta-hydroxylase 3261673 4082697 Sala_3110 Sphingopyxis alaskensis RB2256 aspartyl/asparaginyl beta-hydroxylase YP_618147.1 3260474 D 317655 CDS YP_618148.1 103488587 4082698 3261769..3262083 1 NC_008048.1 hypothetical protein 3262083 4082698 Sala_3111 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618148.1 3261769 D 317655 CDS YP_618149.1 103488588 4082699 3262121..3262435 1 NC_008048.1 hypothetical protein 3262435 4082699 Sala_3112 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618149.1 3262121 D 317655 CDS YP_618150.1 103488589 4082700 complement(3262670..3263314) 1 NC_008048.1 TetR family transcriptional regulator 3263314 4082700 Sala_3113 Sphingopyxis alaskensis RB2256 TetR family transcriptional regulator YP_618150.1 3262670 R 317655 CDS YP_618151.1 103488590 4082701 3263368..3264795 1 NC_008048.1 RND efflux system, outer membrane lipoprotein, NodT 3264795 4082701 Sala_3114 Sphingopyxis alaskensis RB2256 RND efflux system, outer membrane lipoprotein, NodT YP_618151.1 3263368 D 317655 CDS YP_618152.1 103488591 4082702 3264792..3265931 1 NC_008048.1 secretion protein HlyD 3265931 4082702 Sala_3115 Sphingopyxis alaskensis RB2256 secretion protein HlyD YP_618152.1 3264792 D 317655 CDS YP_618153.1 103488592 4082703 3266093..3267643 1 NC_008048.1 EmrB/QacA family drug resistance transporter 3267643 4082703 Sala_3117 Sphingopyxis alaskensis RB2256 EmrB/QacA family drug resistance transporter YP_618153.1 3266093 D 317655 CDS YP_618154.1 103488593 4082704 3267709..3269604 1 NC_008048.1 ABC transporter 3269604 4082704 Sala_3118 Sphingopyxis alaskensis RB2256 ABC transporter YP_618154.1 3267709 D 317655 CDS YP_618155.1 103488594 4082705 3269701..3270792 1 NC_008048.1 4-hydroxyphenylpyruvate dioxygenase 3270792 4082705 Sala_3119 Sphingopyxis alaskensis RB2256 4-hydroxyphenylpyruvate dioxygenase YP_618155.1 3269701 D 317655 CDS YP_618156.1 103488595 4082706 3270789..3271334 1 NC_008048.1 glyoxalase/bleomycin resistance protein/dioxygenase 3271334 4082706 Sala_3120 Sphingopyxis alaskensis RB2256 glyoxalase/bleomycin resistance protein/dioxygenase YP_618156.1 3270789 D 317655 CDS YP_618157.1 103488596 4082707 complement(3271431..3271787) 1 NC_008048.1 hypothetical protein 3271787 4082707 Sala_3121 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618157.1 3271431 R 317655 CDS YP_618158.1 103488597 4082708 3272042..3274363 1 NC_008048.1 SARP family transcriptional regulator 3274363 4082708 Sala_3122 Sphingopyxis alaskensis RB2256 SARP family transcriptional regulator YP_618158.1 3272042 D 317655 CDS YP_618159.1 103488598 4082709 complement(3274335..3275993) 1 NC_008048.1 involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 3275993 purH 4082709 purH Sphingopyxis alaskensis RB2256 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_618159.1 3274335 R 317655 CDS YP_618160.1 103488599 4082710 complement(3276105..3277133) 1 NC_008048.1 3-phytase 3277133 4082710 Sala_3124 Sphingopyxis alaskensis RB2256 3-phytase YP_618160.1 3276105 R 317655 CDS YP_618161.1 103488600 4082711 3277319..3279676 1 NC_008048.1 TonB-dependent receptor 3279676 4082711 Sala_3125 Sphingopyxis alaskensis RB2256 TonB-dependent receptor YP_618161.1 3277319 D 317655 CDS YP_618162.1 103488601 4082712 3279688..3279945 1 NC_008048.1 hypothetical protein 3279945 4082712 Sala_3126 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618162.1 3279688 D 317655 CDS YP_618163.1 103488602 4082383 complement(3280090..3281868) 1 NC_008048.1 heparinase II/III-like protein 3281868 4082383 Sala_3127 Sphingopyxis alaskensis RB2256 heparinase II/III-like protein YP_618163.1 3280090 R 317655 CDS YP_618164.1 103488603 4082384 complement(3281872..3282543) 1 NC_008048.1 ribulose-phosphate 3-epimerase 3282543 4082384 Sala_3128 Sphingopyxis alaskensis RB2256 ribulose-phosphate 3-epimerase YP_618164.1 3281872 R 317655 CDS YP_618165.1 103488604 4082385 complement(3282561..3282812) 1 NC_008048.1 hypothetical protein 3282812 4082385 Sala_3129 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618165.1 3282561 R 317655 CDS YP_618166.1 103488605 4082386 complement(3282829..3283347) 1 NC_008048.1 NAD metabolism ATPase/kinase-like protein 3283347 4082386 Sala_3130 Sphingopyxis alaskensis RB2256 NAD metabolism ATPase/kinase-like protein YP_618166.1 3282829 R 317655 CDS YP_618167.1 103488606 4082387 complement(3283344..3283913) 1 NC_008048.1 nicotinamide mononucleotide transporter 3283913 4082387 Sala_3131 Sphingopyxis alaskensis RB2256 nicotinamide mononucleotide transporter YP_618167.1 3283344 R 317655 CDS YP_618168.1 103488607 4082388 complement(3283910..3284893) 1 NC_008048.1 squalene/phytoene synthase 3284893 4082388 Sala_3132 Sphingopyxis alaskensis RB2256 squalene/phytoene synthase YP_618168.1 3283910 R 317655 CDS YP_618169.1 103488608 4082389 complement(3284893..3285474) 1 NC_008048.1 hypothetical protein 3285474 4082389 Sala_3133 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618169.1 3284893 R 317655 CDS YP_618170.1 103488609 4082390 complement(3285510..3286988) 1 NC_008048.1 amine oxidase 3286988 4082390 Sala_3134 Sphingopyxis alaskensis RB2256 amine oxidase YP_618170.1 3285510 R 317655 CDS YP_618171.1 103488610 4082391 complement(3286985..3288142) 1 NC_008048.1 lycopene cyclase 3288142 4082391 Sala_3135 Sphingopyxis alaskensis RB2256 lycopene cyclase YP_618171.1 3286985 R 317655 CDS YP_618172.1 103488611 4082392 3288216..3288977 1 NC_008048.1 sterol desaturase 3288977 4082392 Sala_3136 Sphingopyxis alaskensis RB2256 sterol desaturase YP_618172.1 3288216 D 317655 CDS YP_618173.1 103488612 4082393 3288943..3289332 1 NC_008048.1 hypothetical protein 3289332 4082393 Sala_3137 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618173.1 3288943 D 317655 CDS YP_618174.1 103488613 4082394 3289366..3291087 1 NC_008048.1 apolipoprotein N-acyltransferase 3291087 4082394 Sala_3138 Sphingopyxis alaskensis RB2256 apolipoprotein N-acyltransferase YP_618174.1 3289366 D 317655 CDS YP_618175.1 103488614 4082395 3291137..3292357 1 NC_008048.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 3292357 4082395 Sala_3139 Sphingopyxis alaskensis RB2256 S-adenosylmethionine synthetase YP_618175.1 3291137 D 317655 CDS YP_618176.1 103488615 4082396 3292374..3293153 1 NC_008048.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 3293153 trmB 4082396 trmB Sphingopyxis alaskensis RB2256 tRNA (guanine-N(7)-)-methyltransferase YP_618176.1 3292374 D 317655 CDS YP_618177.1 103488616 4082397 complement(3293281..3293616) 1 NC_008048.1 hypothetical protein 3293616 4082397 Sala_3141 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618177.1 3293281 R 317655 CDS YP_618178.1 103488617 4082398 3293700..3294626 1 NC_008048.1 LysR family transcriptional regulator 3294626 4082398 Sala_3142 Sphingopyxis alaskensis RB2256 LysR family transcriptional regulator YP_618178.1 3293700 D 317655 CDS YP_618179.1 103488618 4082399 3294749..3295516 1 NC_008048.1 hypothetical protein 3295516 4082399 Sala_3143 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618179.1 3294749 D 317655 CDS YP_618180.1 103488619 4082400 complement(3295572..3296123) 1 NC_008048.1 hypothetical protein 3296123 4082400 Sala_3144 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618180.1 3295572 R 317655 CDS YP_618181.1 103488620 4082401 3296312..3297448 1 NC_008048.1 catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 3297448 4082401 Sala_3145 Sphingopyxis alaskensis RB2256 3-oxoacyl-ACP synthase YP_618181.1 3296312 D 317655 CDS YP_618182.1 103488621 4082482 complement(3297558..3298325) 1 NC_008048.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 3298325 4082482 Sala_3146 Sphingopyxis alaskensis RB2256 imidazole glycerol phosphate synthase subunit HisF YP_618182.1 3297558 R 317655 CDS YP_618183.1 103488622 4082483 complement(3298441..3299175) 1 NC_008048.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 3299175 4082483 Sala_3147 Sphingopyxis alaskensis RB2256 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase YP_618183.1 3298441 R 317655 CDS YP_618184.1 103488623 4082484 complement(3299163..3299771) 1 NC_008048.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 3299771 hisH 4082484 hisH Sphingopyxis alaskensis RB2256 imidazole glycerol phosphate synthase subunit HisH YP_618184.1 3299163 R 317655 CDS YP_618185.1 103488624 4082485 complement(3299781..3300368) 1 NC_008048.1 catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase 3300368 hisB 4082485 hisB Sphingopyxis alaskensis RB2256 imidazoleglycerol-phosphate dehydratase YP_618185.1 3299781 R 317655 CDS YP_618186.1 103488625 4082486 3300456..3300938 1 NC_008048.1 hypothetical protein 3300938 4082486 Sala_3150 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618186.1 3300456 D 317655 CDS YP_618187.1 103488626 4082487 3300943..3301254 1 NC_008048.1 hypothetical protein 3301254 4082487 Sala_3151 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618187.1 3300943 D 317655 CDS YP_618188.1 103488627 4082488 3301251..3302666 1 NC_008048.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 3302666 fumC 4082488 fumC Sphingopyxis alaskensis RB2256 fumarate hydratase YP_618188.1 3301251 D 317655 CDS YP_618189.1 103488628 4082489 3302688..3303056 1 NC_008048.1 hypothetical protein 3303056 4082489 Sala_3153 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618189.1 3302688 D 317655 CDS YP_618190.1 103488629 4082490 complement(3303136..3303702) 1 NC_008048.1 hypothetical protein 3303702 4082490 Sala_3154 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618190.1 3303136 R 317655 CDS YP_618191.1 103488630 4082491 3303763..3304425 1 NC_008048.1 Essential for recycling GMP and indirectly, cGMP; guanylate kinase 3304425 gmk 4082491 gmk Sphingopyxis alaskensis RB2256 guanylate kinase YP_618191.1 3303763 D 317655 CDS YP_618192.1 103488631 4082492 complement(3304445..3304897) 1 NC_008048.1 thioesterase superfamily protein 3304897 4082492 Sala_3156 Sphingopyxis alaskensis RB2256 thioesterase superfamily protein YP_618192.1 3304445 R 317655 CDS YP_618193.1 103488632 4082493 complement(3304899..3305762) 1 NC_008048.1 short-chain dehydrogenase/reductase SDR 3305762 4082493 Sala_3157 Sphingopyxis alaskensis RB2256 short-chain dehydrogenase/reductase SDR YP_618193.1 3304899 R 317655 CDS YP_618194.1 103488633 4082494 complement(3305804..3306973) 1 NC_008048.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 3306973 4082494 Sala_3158 Sphingopyxis alaskensis RB2256 acetyl-CoA acetyltransferase YP_618194.1 3305804 R 317655 CDS YP_618195.1 103488634 4082495 complement(3307074..3308228) 1 NC_008048.1 acyl-CoA dehydrogenase-like protein 3308228 4082495 Sala_3159 Sphingopyxis alaskensis RB2256 acyl-CoA dehydrogenase-like protein YP_618195.1 3307074 R 317655 CDS YP_618196.1 103488635 4082496 3308629..3309498 1 NC_008048.1 senescence marker protein-30 3309498 4082496 Sala_3160 Sphingopyxis alaskensis RB2256 senescence marker protein-30 YP_618196.1 3308629 D 317655 CDS YP_618197.1 103488636 4082497 3309753..3311939 1 NC_008048.1 peptidyl-dipeptidase Dcp 3311939 4082497 Sala_3161 Sphingopyxis alaskensis RB2256 peptidyl-dipeptidase Dcp YP_618197.1 3309753 D 317655 CDS YP_618198.1 103488637 4082498 complement(3312213..3312830) 1 NC_008048.1 hypothetical protein 3312830 4082498 Sala_3162 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618198.1 3312213 R 317655 CDS YP_618199.1 103488638 4082499 complement(3312867..3313274) 1 NC_008048.1 glyoxalase/bleomycin resistance protein/dioxygenase 3313274 4082499 Sala_3163 Sphingopyxis alaskensis RB2256 glyoxalase/bleomycin resistance protein/dioxygenase YP_618199.1 3312867 R 317655 CDS YP_618200.1 103488639 4082500 complement(3313383..3313982) 1 NC_008048.1 cyclic nucleotide-binding protein 3313982 4082500 Sala_3164 Sphingopyxis alaskensis RB2256 cyclic nucleotide-binding protein YP_618200.1 3313383 R 317655 CDS YP_618201.1 103488640 4082501 3314648..3315829 1 NC_008048.1 Rieske (2Fe-2S) protein 3315829 4082501 Sala_3165 Sphingopyxis alaskensis RB2256 Rieske (2Fe-2S) protein YP_618201.1 3314648 D 317655 CDS YP_618202.1 103488641 4082502 3315826..3317445 1 NC_008048.1 FAD dependent oxidoreductase 3317445 4082502 Sala_3166 Sphingopyxis alaskensis RB2256 FAD dependent oxidoreductase YP_618202.1 3315826 D 317655 CDS YP_618203.1 103488642 4082503 complement(3317407..3318717) 1 NC_008048.1 amino acid permease 3318717 4082503 Sala_3167 Sphingopyxis alaskensis RB2256 amino acid permease YP_618203.1 3317407 R 317655 CDS YP_618204.1 103488643 4082504 complement(3318722..3321109) 1 NC_008048.1 TonB-dependent receptor 3321109 4082504 Sala_3168 Sphingopyxis alaskensis RB2256 TonB-dependent receptor YP_618204.1 3318722 R 317655 CDS YP_618205.1 103488644 4082505 complement(3321409..3323223) 1 NC_008048.1 hypothetical protein 3323223 4082505 Sala_3169 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618205.1 3321409 R 317655 CDS YP_618206.1 103488645 4082506 complement(3323233..3324840) 1 NC_008048.1 DSBA oxidoreductase 3324840 4082506 Sala_3170 Sphingopyxis alaskensis RB2256 DSBA oxidoreductase YP_618206.1 3323233 R 317655 CDS YP_618207.1 103488646 4082507 complement(3324897..3326300) 1 NC_008048.1 peptidase M48, Ste24p 3326300 4082507 Sala_3171 Sphingopyxis alaskensis RB2256 peptidase M48, Ste24p YP_618207.1 3324897 R 317655 CDS YP_618208.1 103488647 4082508 complement(3326431..3329076) 1 NC_008048.1 ribonuclease 3329076 4082508 Sala_3172 Sphingopyxis alaskensis RB2256 ribonuclease YP_618208.1 3326431 R 317655 CDS YP_618209.1 103488648 4082509 3329511..3330578 1 NC_008048.1 N-acetylmuramoyl-L-alanine amidase 3330578 4082509 Sala_3173 Sphingopyxis alaskensis RB2256 N-acetylmuramoyl-L-alanine amidase YP_618209.1 3329511 D 317655 CDS YP_618210.1 103488649 4082510 3330613..3331866 1 NC_008048.1 FAD-linked oxidoreductase 3331866 4082510 Sala_3174 Sphingopyxis alaskensis RB2256 FAD-linked oxidoreductase YP_618210.1 3330613 D 317655 CDS YP_618211.1 103488650 4082511 3331863..3333008 1 NC_008048.1 threonine aldolase family protein 3333008 4082511 Sala_3175 Sphingopyxis alaskensis RB2256 threonine aldolase family protein YP_618211.1 3331863 D 317655 CDS YP_618212.1 103488651 4082512 3333073..3335589 1 NC_008048.1 glycosyl transferase family protein 3335589 4082512 Sala_3176 Sphingopyxis alaskensis RB2256 glycosyl transferase family protein YP_618212.1 3333073 D 317655 CDS YP_618213.1 103488652 4082513 3335668..3336795 1 NC_008048.1 peptide chain release factor 2 3336795 4082513 Sala_3177 Sphingopyxis alaskensis RB2256 peptide chain release factor 2 YP_618213.1 3335668 D 317655 CDS YP_618214.1 103488653 4082514 3336795..3337514 1 NC_008048.1 type 11 methyltransferase 3337514 4082514 Sala_3178 Sphingopyxis alaskensis RB2256 type 11 methyltransferase YP_618214.1 3336795 D 317655 CDS YP_618215.1 103488654 4082515 complement(3337609..3337974) 1 NC_008048.1 hypothetical protein 3337974 4082515 Sala_3179 Sphingopyxis alaskensis RB2256 hypothetical protein YP_618215.1 3337609 R 317655 CDS YP_618216.1 103488655 4082516 complement(3337962..3338711) 1 NC_008048.1 UBA/THIF-type NAD/FAD binding fold 3338711 4082516 Sala_3180 Sphingopyxis alaskensis RB2256 UBA/THIF-type NAD/FAD binding fold YP_618216.1 3337962 R 317655 CDS YP_618217.1 103488656 4082517 complement(3338711..3339229) 1 NC_008048.1 deoxyuridine 5'-triphosphate nucleotidohydrolase 3339229 4082517 Sala_3181 Sphingopyxis alaskensis RB2256 deoxyuridine 5'-triphosphate nucleotidohydrolase YP_618217.1 3338711 R 317655 CDS YP_618218.1 103488657 4082518 complement(3339222..3340484) 1 NC_008048.1 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 3340484 4082518 Sala_3182 Sphingopyxis alaskensis RB2256 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase YP_618218.1 3339222 R 317655 CDS YP_618219.1 103488658 4082519 complement(3340488..3340784) 1 NC_008048.1 putative CcdB-like protein 3340784 4082519 Sala_3183 Sphingopyxis alaskensis RB2256 putative CcdB-like protein YP_618219.1 3340488 R 317655 CDS YP_618220.1 103488659 4082520 complement(3340785..3341030) 1 NC_008048.1 post-segregation antitoxin CcdA 3341030 4082520 Sala_3184 Sphingopyxis alaskensis RB2256 post-segregation antitoxin CcdA YP_618220.1 3340785 R 317655 CDS YP_618221.1 103488660 4082402 complement(3341075..3342619) 1 NC_008048.1 2-polyprenylphenol 6-hydroxylase 3342619 4082402 Sala_3185 Sphingopyxis alaskensis RB2256 2-polyprenylphenol 6-hydroxylase YP_618221.1 3341075 R 317655 CDS YP_618222.1 103488661 4082403 complement(3342744..3343511) 1 NC_008048.1 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase LpxD 3343511 4082403 Sala_3186 Sphingopyxis alaskensis RB2256 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase LpxD YP_618222.1 3342744 R 317655 CDS YP_618223.1 103488662 4082404 3343577..3344389 1 NC_008048.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 3344389 4082404 Sala_3187 Sphingopyxis alaskensis RB2256 formamidopyrimidine-DNA glycosylase YP_618223.1 3343577 D 317655 CDS YP_618224.1 103488663 4082405 3344579..3344842 1 NC_008048.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 3344842 rpsT 4082405 rpsT Sphingopyxis alaskensis RB2256 30S ribosomal protein S20 YP_618224.1 3344579 D 317655 CDS