-- dump date 20140620_071537 -- class Genbank::CDS -- table cds_note -- id note YP_005060879.1 PFAM: Bacterial extracellular solute-binding protein; manually curated YP_005060880.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005060881.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005060882.1 PFAM: ABC transporter; TOBE domain; TIGRFAM: spermidine/putrescine ABC transporter ATP-binding subunit YP_005060884.1 PFAM: Protein of unknown function (DUF1232) YP_005060885.1 PFAM: Uncharacterized protein conserved in bacteria N-term (DUF3322); Uncharacterized protein conserved in bacteria C-term(DUF2220) YP_005060888.1 PFAM: Protein of unknown function (DUF3375) YP_005060889.1 PFAM: Major Facilitator Superfamily YP_005060891.1 PFAM: Amidohydrolase family YP_005060892.1 PFAM: Basic membrane protein YP_005060893.1 PFAM: ABC transporter YP_005060894.1 PFAM: Branched-chain amino acid transport system / permease component YP_005060895.1 PFAM: Branched-chain amino acid transport system / permease component YP_005060896.1 PFAM: MerR family regulatory protein YP_005060897.1 PFAM: HpcH/HpaI aldolase/citrate lyase family YP_005060899.1 PFAM: Acetyltransferase (GNAT) family YP_005060902.1 PFAM: Tripartite tricarboxylate transporter TctA family YP_005060903.1 PFAM: Tripartite tricarboxylate transporter TctB family YP_005060904.1 PFAM: Tripartite tricarboxylate transporter family receptor YP_005060905.1 PFAM: KDPG and KHG aldolase; TIGRFAM: Entner-Doudoroff aldolase YP_005060906.1 PFAM: pfkB family carbohydrate kinase YP_005060907.1 PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator YP_005060908.1 PFAM: HhH-GPD superfamily base excision DNA repair protein; Helix-hairpin-helix motif; TIGRFAM: endonuclease III YP_005060910.1 PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28 YP_005060911.1 PFAM: Homoserine dehydrogenase, NAD binding domain; Homoserine dehydrogenase; Amino acid kinase family; ACT domain; TIGRFAM: aspartate kinase YP_005060912.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase YP_005060913.1 PFAM: Domain of unknown function (DUF364) YP_005060914.1 PFAM: Galactokinase galactose-binding signature; GHMP kinases N terminal domain YP_005060915.1 PFAM: Galactose-1-phosphate uridyl transferase, C-terminal domain; Galactose-1-phosphate uridyl transferase, N-terminal domain; TIGRFAM: galactose-1-phosphate uridylyltransferase, family 1 YP_005060916.1 PFAM: Bacterial regulatory proteins, lacI family YP_005060917.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_005060918.1 PFAM: Helix-turn-helix YP_005060920.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase, RecQ family YP_005060921.1 PFAM: Response regulator receiver domain; LytTr DNA-binding domain YP_005060925.1 PFAM: ADP-ribosylglycohydrolase YP_005060926.1 PFAM: Aldo/keto reductase family YP_005060928.1 PFAM: Bacterial regulatory proteins, tetR family YP_005060934.1 PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases YP_005060935.1 PFAM: Serpin (serine protease inhibitor) YP_005060936.1 PFAM: Bacterial extracellular solute-binding protein YP_005060937.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005060938.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005060941.1 PFAM: Calcineurin-like phosphoesterase YP_005060942.1 PFAM: Bacterial protein of unknown function (DUF939) YP_005060943.1 PFAM: DOMON domain YP_005060944.1 PFAM: LCCL domain; Histone deacetylation protein Rxt3 YP_005060945.1 PFAM: HD domain; Response regulator receiver domain YP_005060946.1 PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Bacterial extracellular solute-binding proteins, family 3; Hpt domain YP_005060948.1 PFAM: Nucleoside diphosphate kinase YP_005060949.1 PFAM: Isochorismatase family YP_005060950.1 PFAM: Desulfoferrodoxin, N-terminal domain; Desulfoferrodoxin; TIGRFAM: desulfoferrodoxin FeS4 iron-binding domain; desulfoferrodoxin; desulfoferrodoxin ferrous iron-binding domain YP_005060951.1 TIGRFAM: phosphate binding protein YP_005060952.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstC; phosphate ABC transporter, permease protein PstA YP_005060953.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstA YP_005060954.1 PFAM: ABC transporter; TIGRFAM: phosphate ABC transporter, ATP-binding protein YP_005060955.1 PFAM: PhoU domain; TIGRFAM: phosphate transport system regulatory protein PhoU YP_005060956.1 PFAM: FemAB family YP_005060957.1 PFAM: XdhC and CoxI family YP_005060958.1 PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase family protein YP_005060959.1 PFAM: YeeE/YedE family (DUF395) YP_005060960.1 PFAM: SirA-like protein YP_005060961.1 PFAM: Protein of unknown function (DUF3343) YP_005060962.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: selenium donor protein YP_005060963.1 PFAM: SIS domain; TIGRFAM: N-acetylmuramic acid 6-phosphate etherase YP_005060964.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005060965.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005060966.1 PFAM: Bacterial extracellular solute-binding protein YP_005060967.1 PFAM: Electron transfer flavoprotein domain YP_005060968.1 PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain YP_005060969.1 PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycolate oxidase, subunit GlcD YP_005060970.1 PFAM: Acetyltransferase (GNAT) family; TIGRFAM: putative beta-lysine N-acetyltransferase YP_005060971.1 PFAM: Lysine-2,3-aminomutase; Radical SAM superfamily; TIGRFAM: KamA family protein; lysine-2,3-aminomutase YP_005060973.1 PFAM: Membrane transport protein YP_005060974.1 PFAM: XdhC and CoxI family; TIGRFAM: selenium-dependent molybdenum hydroxylase system protein, YqeB family YP_005060975.1 TIGRFAM: probable selenium-dependent hydroxylase accessory protein YqeC YP_005060977.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_005060978.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_005060979.1 PFAM: NfeD-like YP_005060980.1 PFAM: SPFH domain / Band 7 family YP_005060981.1 PFAM: Acetokinase family; TIGRFAM: acetate kinase YP_005060983.1 PFAM: FAD binding domain; UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase YP_005060984.1 PFAM: tRNA synthetases class I (C) catalytic domain; TIGRFAM: cysteinyl-tRNA synthetase YP_005060985.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_005060987.1 PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Valyl tRNA synthetase tRNA binding arm; TIGRFAM: valyl-tRNA synthetase YP_005060988.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; manually curated YP_005060990.1 PFAM: Glycosyl transferase family 2 YP_005060992.1 PFAM: Peptidase family U32 YP_005060993.1 PFAM: ATP-dependent protease La (LON) domain; ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: ATP-dependent protease La YP_005060994.1 PFAM: Amino acid kinase family; TIGRFAM: carbamate kinase YP_005060997.1 PFAM: Recombination protein O C terminal; Recombination protein O N terminal; TIGRFAM: DNA repair protein RecO YP_005060998.1 PFAM: DHH family; DHHA1 domain; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ YP_005060999.1 PFAM: Ribosomal protein S21; TIGRFAM: ribosomal protein S21 YP_005061000.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YP_005061001.1 PFAM: Aminotransferase class-V; TIGRFAM: phosphoserine aminotransferase YP_005061002.1 PFAM: HTH domain; AsnC family YP_005061004.1 PFAM: Dihydroorotate dehydrogenase YP_005061005.1 PFAM: Acyltransferase YP_005061007.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; MutL C terminal dimerisation domain; DNA mismatch repair protein, C-terminal domain; TIGRFAM: DNA mismatch repair protein MutL YP_005061010.1 PFAM: PP-loop family YP_005061011.1 PFAM: HD domain YP_005061013.1 PFAM: Bacterial extracellular solute-binding protein YP_005061014.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005061015.1 PFAM: ABC transporter; TOBE domain YP_005061016.1 PFAM: Bacterial regulatory proteins, tetR family YP_005061018.1 PFAM: Protein of unknown function (DUF1329) YP_005061019.1 PFAM: MMPL family YP_005061021.1 PFAM: Serine dehydratase alpha chain YP_005061022.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_005061023.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005061024.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005061025.1 PFAM: Bacterial extracellular solute-binding protein YP_005061026.1 PFAM: Uroporphyrinogen decarboxylase (URO-D) YP_005061029.1 PFAM: Bacterial extracellular solute-binding proteins, family 3 YP_005061030.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family YP_005061031.1 PFAM: ABC transporter YP_005061032.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_005061033.1 PFAM: Bacterial extracellular solute-binding proteins, family 3 YP_005061034.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family YP_005061035.1 PFAM: ABC transporter YP_005061036.1 PFAM: Major Facilitator Superfamily YP_005061037.1 PFAM: Glycosyl transferases group 1 YP_005061038.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase YP_005061039.1 PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain YP_005061040.1 PFAM: DeoC/LacD family aldolase YP_005061041.1 PFAM: Basic membrane protein YP_005061042.1 PFAM: ABC transporter YP_005061043.1 PFAM: Branched-chain amino acid transport system / permease component YP_005061044.1 PFAM: Branched-chain amino acid transport system / permease component YP_005061045.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_005061046.1 PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein YP_005061047.1 PFAM: Domain of unknown function (DUF1850) YP_005061048.1 PFAM: NMT1/THI5 like; TIGRFAM: TRAP transporter solute receptor, TAXI family YP_005061049.1 PFAM: UbiA prenyltransferase family YP_005061050.1 PFAM: HD domain; GAF domain; PAS fold; TIGRFAM: PAS domain S-box YP_005061052.1 PFAM: Borrelia membrane protein P13 YP_005061053.1 PFAM: DAK2 domain YP_005061054.1 PFAM: Dak1 domain YP_005061055.1 PFAM: Ureidoglycolate hydrolase YP_005061056.1 PFAM: Branched-chain amino acid transport system / permease component YP_005061057.1 PFAM: Branched-chain amino acid transport system / permease component YP_005061058.1 PFAM: ABC transporter YP_005061059.1 PFAM: family YP_005061060.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_005061062.1 TIGRFAM: ferredoxin-type protein, NapH/MauN family YP_005061064.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_005061065.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_005061067.1 PFAM: Protein of unknown function (DUF969) YP_005061068.1 PFAM: Protein of unknown function (DUF979) YP_005061069.1 PFAM: Pyroglutamyl peptidase; TIGRFAM: pyroglutamyl-peptidase I YP_005061070.1 PFAM: AIG2-like family YP_005061071.1 PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit YP_005061072.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain YP_005061073.1 PFAM: Iron only hydrogenase large subunit, C-terminal domain; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Iron hydrogenase small subunit; TIGRFAM: hydrogenase, Fe-only YP_005061074.1 PFAM: CoA binding domain; CoA-ligase; Protein of unknown function (DUF1116) YP_005061075.1 PFAM: Putative cyclase YP_005061077.1 PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain YP_005061078.1 PFAM: Rubredoxin-like zinc ribbon domain (DUF35_N) YP_005061079.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_005061080.1 PFAM: Protein of unknown function (DUF2877) YP_005061081.1 PFAM: FAD binding domain in molybdopterin dehydrogenase; CO dehydrogenase flavoprotein C-terminal domain YP_005061082.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain YP_005061083.1 PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain YP_005061084.1 PFAM: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) YP_005061085.1 PFAM: Bacterial extracellular solute-binding proteins, family 3 YP_005061086.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family YP_005061087.1 PFAM: ABC transporter YP_005061088.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_005061090.1 PFAM: Pyridoxal-dependent decarboxylase conserved domain YP_005061091.1 PFAM: Aminotransferase class-III; TIGRFAM: 2,4-diaminobutyrate 4-transaminases YP_005061092.1 PFAM: Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase YP_005061093.1 PFAM: Uncharacterized BCR, YitT family COG1284 YP_005061095.1 PFAM: Ankyrin repeat YP_005061096.1 PFAM: Sulfite exporter TauE/SafE YP_005061097.1 PFAM: Radical SAM superfamily YP_005061099.1 PFAM: FMN-binding domain YP_005061102.1 PFAM: Helix-turn-helix; MazG nucleotide pyrophosphohydrolase domain YP_005061103.1 PFAM: Uncharacterized conserved protein (DUF2075) YP_005061104.1 PFAM: Major Facilitator Superfamily YP_005061105.1 PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG YP_005061106.1 PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain YP_005061107.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005061108.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005061110.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_005061111.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; family YP_005061114.1 PFAM: Nitroreductase family YP_005061115.1 PFAM: alpha/beta hydrolase fold YP_005061117.1 PFAM: Protein of unknown function DUF72 YP_005061118.1 PFAM: impB/mucB/samB family YP_005061119.1 PFAM: Bacterial DNA polymerase III alpha subunit; PHP domain; TIGRFAM: DNA-directed DNA polymerase III (polc) YP_005061120.1 PFAM: Acetyltransferase (GNAT) family YP_005061121.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: zinc-binding alcohol dehydrogenase family protein YP_005061123.1 PFAM: Oxidoreductase NAD-binding domain; FAD-binding domain YP_005061127.1 PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain YP_005061128.1 PFAM: Phosphorylase superfamily; TIGRFAM: 5'-deoxy-5'-methylthioadenosine phosphorylase YP_005061129.1 PFAM: Initiation factor 2 subunit family; TIGRFAM: eIF-2B alpha/beta/delta-related uncharacterized proteins; S-methyl-5-thioribose-1-phosphate isomerase YP_005061130.1 PFAM: Basic membrane protein YP_005061131.1 PFAM: ABC transporter YP_005061132.1 PFAM: Branched-chain amino acid transport system / permease component YP_005061133.1 PFAM: Branched-chain amino acid transport system / permease component YP_005061134.1 PFAM: CAAX amino terminal protease family YP_005061135.1 PFAM: NAD dependent epimerase/dehydratase family; manually curated YP_005061136.1 PFAM: NAD dependent epimerase/dehydratase family YP_005061137.1 PFAM: Protein of unknown function (DUF1576) YP_005061139.1 PFAM: CAAX amino terminal protease family YP_005061140.1 PFAM: ABC transporter YP_005061141.1 PFAM: ABC-2 type transporter YP_005061142.1 PFAM: Uncharacterized conserved protein (DUF2132) YP_005061143.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase YP_005061145.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_005061146.1 PFAM: Protein of unknown function (DUF2798) YP_005061147.1 PFAM: 5'-nucleotidase, C-terminal domain; Calcineurin-like phosphoesterase YP_005061149.1 PFAM: SPFH domain / Band 7 family YP_005061154.1 PFAM: Cupin domain; Bacterial regulatory helix-turn-helix proteins, AraC family YP_005061155.1 PFAM: NADH:flavin oxidoreductase / NADH oxidase family YP_005061156.1 PFAM: short chain dehydrogenase YP_005061157.1 PFAM: Sugar-specific transcriptional regulator TrmB YP_005061158.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family YP_005061160.1 PFAM: Flavodoxin; TIGRFAM: flavodoxin, short chain YP_005061162.1 PFAM: Methyltransferase domain YP_005061163.1 PFAM: 2',5' RNA ligase family; TIGRFAM: 2'-5' RNA ligase YP_005061165.1 PFAM: Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082); manually curated YP_005061167.1 PFAM: CYTH domain; TIGRFAM: adenylyl cyclase CyaB, putative YP_005061168.1 PFAM: Domain of unknown function (DUF336) YP_005061169.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold YP_005061171.1 PFAM: Acyltransferase YP_005061172.1 PFAM: ABC transporter YP_005061173.1 PFAM: FecCD transport family YP_005061174.1 PFAM: Periplasmic binding protein YP_005061175.1 PFAM: RNase H YP_005061176.1 PFAM: Chromate transporter YP_005061177.1 PFAM: Chromate transporter YP_005061178.1 PFAM: Tetratricopeptide repeat YP_005061180.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005061181.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005061182.1 PFAM: Bacterial extracellular solute-binding protein YP_005061183.1 PFAM: Adenylate kinase, active site lid; Adenylate kinase; TIGRFAM: adenylate kinases YP_005061184.1 PFAM: 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase YP_005061185.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_005061186.1 PFAM: Alpha amylase, catalytic domain YP_005061187.1 PFAM: Alpha amylase, catalytic domain YP_005061188.1 PFAM: Bacterial extracellular solute-binding protein YP_005061189.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005061190.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005061191.1 PFAM: CutC family YP_005061192.1 PFAM: ROK family YP_005061193.1 PFAM: MlrC C-terminus; Protein of unknown function (DUF1485) YP_005061194.1 PFAM: CBS domain; IMP dehydrogenase / GMP reductase domain; TIGRFAM: inosine-5'-monophosphate dehydrogenase YP_005061195.1 PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_005061196.1 PFAM: Protein of unknown function (DUF1113) YP_005061197.1 PFAM: Alanine racemase, N-terminal domain; TIGRFAM: pyridoxal phosphate enzyme, YggS family YP_005061199.1 PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family YP_005061200.1 PFAM: Metallo-beta-lactamase superfamily YP_005061202.1 PFAM: Protein of unknown function, DUF258; TIGRFAM: ribosome small subunit-dependent GTPase A YP_005061203.1 PFAM: MutS domain V; Smr domain; TIGRFAM: MutS2 family protein YP_005061206.1 PFAM: Phosphorylase superfamily; TIGRFAM: purine-nucleoside phosphorylase, family 1 (deoD); uridine phosphorylase YP_005061210.1 PFAM: Protein of unknown function (DUF2764) YP_005061211.1 PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta family, nucleotide-binding domain; ATP synthase alpha/beta chain, C terminal domain YP_005061212.1 PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta family, nucleotide-binding domain YP_005061213.1 PFAM: ATP synthase subunit D; TIGRFAM: H(+)-transporting ATP synthase, vacuolar type, subunit D YP_005061214.1 PFAM: V-type ATPase 116kDa subunit family YP_005061215.1 PFAM: ATP synthase subunit C YP_005061216.1 PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase YP_005061217.1 PFAM: Nitroreductase family YP_005061218.1 PFAM: Domain of unknown function (DUF386); TIGRFAM: uncharacterized protein, YhcH/YjgK/YiaL family YP_005061219.1 PFAM: GcpE protein; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase YP_005061220.1 PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit YP_005061222.1 PFAM: PhoH-like protein YP_005061223.1 PFAM: HD domain; 7TM-HD extracellular; 7TM receptor with intracellular HD hydrolase; TIGRFAM: uncharacterized domain HDIG YP_005061224.1 PFAM: Uncharacterized protein family UPF0054; TIGRFAM: metalloprotein, YbeY/UPF0054 family YP_005061225.1 PFAM: CBS domain; Transporter associated domain YP_005061226.1 PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I YP_005061227.1 PFAM: Phosphoglycerate kinase YP_005061228.1 PFAM: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase YP_005061229.1 PFAM: Preprotein translocase SecG subunit; TIGRFAM: protein translocase, SecG subunit YP_005061231.1 PFAM: SurA N-terminal domain; PPIC-type PPIASE domain YP_005061232.1 PFAM: NusB family; TIGRFAM: transcription antitermination factor NusB YP_005061233.1 PFAM: Metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I YP_005061234.1 PFAM: Phosphoribosyl transferase domain YP_005061235.1 PFAM: Glycosyl transferases group 1 YP_005061238.1 PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YP_005061239.1 PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB; radical SAM methylthiotransferase, MiaB/RimO family YP_005061240.1 PFAM: ST7 protein YP_005061241.1 PFAM: Cupin domain YP_005061242.1 PFAM: Glycosyl hydrolases family 16 YP_005061243.1 PFAM: Glycosyl transferase family 2 YP_005061244.1 PFAM: Metallo-beta-lactamase superfamily; GGDEF domain; Response regulator receiver domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_005061246.1 PFAM: Sir2 family YP_005061247.1 PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family YP_005061248.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_005061250.1 PFAM: ABC transporter YP_005061251.1 PFAM: Branched-chain amino acid transport system / permease component YP_005061252.1 PFAM: family YP_005061253.1 PFAM: Carbon starvation protein CstA YP_005061254.1 PFAM: FAD dependent oxidoreductase YP_005061255.1 PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family YP_005061256.1 PFAM: short chain dehydrogenase YP_005061257.1 PFAM: Domain of unknown function (DUF1848) YP_005061259.1 PFAM: EamA-like transporter family YP_005061260.1 PFAM: Phage integrase family YP_005061261.1 PFAM: SmpB protein; TIGRFAM: SsrA-binding protein YP_005061262.1 PFAM: Formylglycine-generating sulfatase enzyme YP_005061263.1 PFAM: Peptidase S26; TIGRFAM: signal peptidase I, bacterial type YP_005061264.1 PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase YP_005061265.1 PFAM: Domain of unknown function DUF28; TIGRFAM: DNA-binding regulatory protein, YebC/PmpR family YP_005061266.1 PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC YP_005061267.1 PFAM: RuvA N terminal domain; TIGRFAM: Holliday junction DNA helicase, RuvA subunit YP_005061268.1 PFAM: Holliday junction DNA helicase ruvB C-terminus; Holliday junction DNA helicase ruvB N-terminus; TIGRFAM: Holliday junction DNA helicase, RuvB subunit YP_005061269.1 PFAM: Queuosine biosynthesis protein; TIGRFAM: S-adenosylmethionine:tRNA ribosyltransferase-isomerase YP_005061270.1 PFAM: Thymidylate kinase; TIGRFAM: thymidylate kinase YP_005061272.1 PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein YP_005061273.1 PFAM: MutS family domain IV; MutS domain II; MutS domain V; MutS domain I; MutS domain III; TIGRFAM: DNA mismatch repair protein MutS YP_005061274.1 TIGRFAM: comF family protein YP_005061275.1 PFAM: Uncharacterised BCR, YhbC family COG0779 YP_005061276.1 PFAM: NusA N-terminal domain; TIGRFAM: transcription termination factor NusA YP_005061277.1 PFAM: Elongation factor Tu domain 2; Translation-initiation factor 2; Translation initiation factor IF-2, N-terminal region; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation initiation factor IF-2 YP_005061278.1 PFAM: Ribosome-binding factor A; TIGRFAM: ribosome-binding factor A YP_005061279.1 PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase YP_005061280.1 PFAM: FAD synthetase YP_005061281.1 PFAM: Ribosomal protein S15; TIGRFAM: ribosomal protein S15, bacterial/organelle YP_005061282.1 PFAM: KH domain; S1 RNA binding domain; 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; Polyribonucleotide nucleotidyltransferase, RNA binding domain; TIGRFAM: polyribonucleotide nucleotidyltransferase YP_005061283.1 PFAM: dUTPase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) YP_005061284.1 PFAM: Predicted permease YjgP/YjgQ family YP_005061285.1 PFAM: Predicted permease YjgP/YjgQ family YP_005061286.1 PFAM: Queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylases, various specificities; tRNA-guanine transglycosylase, queuosine-34-forming YP_005061287.1 PFAM: MviN-like protein; TIGRFAM: integral membrane protein MviN YP_005061288.1 PFAM: domain; Transcription elongation factor, GreA/GreB, C-term; TIGRFAM: transcription elongation factor GreA YP_005061289.1 PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase YP_005061290.1 PFAM: D-Tyr-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase YP_005061291.1 PFAM: recA bacterial DNA recombination protein; TIGRFAM: protein RecA YP_005061292.1 PFAM: ScpA/B protein YP_005061293.1 PFAM: Putative transcriptional regulators (Ypuh-like); TIGRFAM: segregation and condensation protein B YP_005061294.1 PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase YP_005061295.1 PFAM: Cytidylate kinase; TIGRFAM: cytidylate kinase YP_005061296.1 PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1 YP_005061299.1 PFAM: SIS domain; Glutamine amidotransferases class-II; TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase (isomerizing) YP_005061301.1 PFAM: ABC transporter YP_005061302.1 PFAM: Bacterial regulatory proteins, gntR family YP_005061303.1 PFAM: MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein YP_005061304.1 PFAM: Bacterial regulatory proteins, gntR family; TrkA-C domain YP_005061305.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_005061306.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005061307.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005061308.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain YP_005061309.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2344); Radical SAM superfamily; TIGRFAM: radical SAM family uncharacterized protein; radical SAM-linked protein YP_005061311.1 PFAM: Putative zinc ribbon domain YP_005061312.1 PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 factor, region 1.1; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoD, C-terminal domain YP_005061313.1 PFAM: Toprim domain; DNA primase catalytic core, N-terminal domain; CHC2 zinc finger; DnaB-helicase binding domain of primase; TIGRFAM: DNA primase, catalytic core YP_005061314.1 PFAM: Uncharacterised protein family (UPF0153) YP_005061315.1 PFAM: Chorismate mutase type I; TIGRFAM: monofunctional chorismate mutase, gram positive type, clade 1 YP_005061317.1 PFAM: Thiamin pyrophosphokinase, catalytic domain; TIGRFAM: thiamine pyrophosphokinase YP_005061318.1 PFAM: Protein of unknown function (DUF1015) YP_005061319.1 PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein YP_005061320.1 PFAM: Septum formation initiator YP_005061322.1 PFAM: Metallo-beta-lactamase superfamily; TIGRFAM: ribonuclease Z; manually curated YP_005061323.1 PFAM: Predicted permease YP_005061324.1 PFAM: ABC transporter YP_005061325.1 PFAM: Predicted permease YP_005061327.1 PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; TIGRFAM: signal recognition particle-docking protein FtsY YP_005061329.1 PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 2; manually curated YP_005061330.1 PFAM: Glycosyl hydrolase family 57; Domain of unknown function (DUF1926) YP_005061331.1 PFAM: Putative Fe-S cluster; 4Fe-4S binding domain; TIGRFAM: electron transport complex, RnfABCDGE type, B subunit YP_005061332.1 PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: electron transport complex, RnfABCDGE type, A subunit YP_005061333.1 PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: electron transport complex, RnfABCDGE type, E subunit YP_005061334.1 PFAM: FMN-binding domain; TIGRFAM: electron transport complex, RnfABCDGE type, G subunit YP_005061335.1 PFAM: NQR2, RnfD, RnfE family; TIGRFAM: electron transport complex, RnfABCDGE type, D subunit YP_005061336.1 PFAM: Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; TIGRFAM: electron transport complex, RnfABCDGE type, C subunit YP_005061338.1 PFAM: Poly A polymerase head domain; TIGRFAM: poly(A) polymerase YP_005061339.1 PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase YP_005061340.1 PFAM: Helicase conserved C-terminal domain; Helicase associated domain (HA2); Domain of unknown function (DUF1605); DEAD/DEAH box helicase; TIGRFAM: ATP-dependent helicase HrpA YP_005061341.1 PFAM: 3-dehydroquinate synthase YP_005061342.1 PFAM: Aminotransferase class-V YP_005061343.1 PFAM: Thiamine biosynthesis protein (ThiI); THUMP domain; TIGRFAM: thiazole biosynthesis/tRNA modification protein ThiI YP_005061344.1 PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; BadF/BadG/BcrA/BcrD ATPase family; CoA enzyme activase uncharacterised domain (DUF2229); TIGRFAM: CoA-substrate-specific enzyme activase, putative YP_005061345.1 PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component YP_005061346.1 PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YP_005061347.1 PFAM: ABC transporter YP_005061348.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005061350.1 PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase YP_005061351.1 PFAM: Zinc ribbon domain; TIGRFAM: putative regulatory protein, FmdB family YP_005061353.1 PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: isoleucyl-tRNA synthetase YP_005061354.1 PFAM: HD domain; Poly A polymerase head domain; TIGRFAM: uncharacterized domain HDIG YP_005061355.1 PFAM: RNase3 domain; Double-stranded RNA binding motif; TIGRFAM: ribonuclease III, bacterial YP_005061356.1 PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein YP_005061357.1 PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32 YP_005061358.1 PFAM: Cytidylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase, bacterial; cytidyltransferase-related domain YP_005061360.1 PFAM: Ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type YP_005061361.1 PFAM: tRNA (Guanine-1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase YP_005061362.1 PFAM: RimM N-terminal domain; TIGRFAM: 16S rRNA processing protein RimM YP_005061363.1 PFAM: KH domain YP_005061364.1 PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16 YP_005061365.1 PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; Signal peptide binding domain; TIGRFAM: signal recognition particle protein YP_005061366.1 PFAM: RecF/RecN/SMC N terminal domain YP_005061367.1 PFAM: Ribonuclease HII YP_005061368.1 PFAM: Protein of unknown function (DUF3276) YP_005061371.1 PFAM: Protein of unknown function (DUF2971) YP_005061374.1 PFAM: EamA-like transporter family YP_005061375.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain YP_005061376.1 PFAM: Sulfatase YP_005061377.1 PFAM: Sulfatase YP_005061378.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005061379.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005061380.1 PFAM: Bacterial extracellular solute-binding protein YP_005061381.1 PFAM: Sulfatase YP_005061382.1 PFAM: Cyclic nucleotide-binding domain YP_005061383.1 PFAM: Carbon starvation protein CstA YP_005061386.1 PFAM: Anion-transporting ATPase; TIGRFAM: arsenite-activated ATPase ArsA YP_005061387.1 PFAM: Thermophilic metalloprotease (M29) YP_005061388.1 PFAM: Thermophilic metalloprotease (M29) YP_005061389.1 PFAM: Bordetella pertussis Bvg accessory factor family; TIGRFAM: pantothenate kinase, type III YP_005061390.1 PFAM: ABC transporter YP_005061391.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: adenine phosphoribosyltransferase YP_005061392.1 PFAM: Glycoprotease family; TIGRFAM: putative glycoprotease GCP; metallohydrolase, glycoprotease/Kae1 family YP_005061394.1 PFAM: Metallo-beta-lactamase superfamily YP_005061395.1 PFAM: Sigma-54 interaction domain; Propionate catabolism activator; PAS fold YP_005061396.1 PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain YP_005061397.1 PFAM: Uncharacterized conserved protein (DUF2088) YP_005061398.1 PFAM: Tripartite tricarboxylate transporter family receptor YP_005061399.1 PFAM: Tripartite tricarboxylate transporter TctB family YP_005061400.1 PFAM: Tripartite tricarboxylate transporter TctA family YP_005061401.1 PFAM: Uncharacterized conserved protein (DUF2088) YP_005061402.1 PFAM: Dihydrodipicolinate synthetase family YP_005061403.1 PFAM: SAF domain; D-galactarate dehydratase / Altronate hydrolase, C terminus; TIGRFAM: galactarate dehydratase YP_005061404.1 PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain; TIGRFAM: pyruvate, phosphate dikinase YP_005061405.1 PFAM: short chain dehydrogenase YP_005061406.1 PFAM: KduI/IolB family YP_005061407.1 PFAM: HpcH/HpaI aldolase/citrate lyase family YP_005061408.1 PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit YP_005061409.1 PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component YP_005061410.1 PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family YP_005061411.1 PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator YP_005061412.1 PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_005061414.1 PFAM: Chaperonin 10 Kd subunit YP_005061415.1 PFAM: Uracil DNA glycosylase superfamily YP_005061416.1 PFAM: DEAD_2; TIGRFAM: DnaQ family exonuclease/DinG family helicase, putative YP_005061417.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain YP_005061418.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_005061420.1 PFAM: Colicin V production protein YP_005061421.1 PFAM: Glycosyltransferase family 28 N-terminal domain; Glycosyltransferase family 28 C-terminal domain; TIGRFAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase YP_005061422.1 PFAM: SecA DEAD-like domain; SecA preprotein cross-linking domain; SEC-C motif; SecA Wing and Scaffold domain; TIGRFAM: preprotein translocase, SecA subunit YP_005061423.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_005061424.1 PFAM: Family 4 glycosyl hydrolase; Family 4 glycosyl hydrolase C-terminal domain YP_005061425.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005061426.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005061427.1 PFAM: Bacterial extracellular solute-binding protein YP_005061428.1 PFAM: Inosine-uridine preferring nucleoside hydrolase YP_005061429.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_005061430.1 PFAM: Bacterial extracellular solute-binding protein YP_005061431.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005061432.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005061433.1 PFAM: O-Glycosyl hydrolase family 30 YP_005061434.1 PFAM: O-Glycosyl hydrolase family 30 YP_005061436.1 PFAM: Helix-turn-helix; Domain of unknown function (DUF955) YP_005061438.1 PFAM: Glycosyl hydrolases family 31 YP_005061439.1 PFAM: Major Facilitator Superfamily; TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter YP_005061440.1 PFAM: Peptidase family M23; LysM domain YP_005061441.1 PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain YP_005061442.1 PFAM: SRP54-type protein, GTPase domain YP_005061443.1 PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent protease HslVU, ATPase subunit YP_005061444.1 PFAM: Proteasome subunit; TIGRFAM: ATP-dependent protease HslVU, peptidase subunit YP_005061445.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family YP_005061446.1 PFAM: DNA recombination-mediator protein A YP_005061447.1 PFAM: Sulfite exporter TauE/SafE YP_005061448.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family YP_005061449.1 PFAM: Tubulin/FtsZ family, GTPase domain; FtsZ family, C-terminal domain; TIGRFAM: cell division protein FtsZ YP_005061450.1 PFAM: Cell division protein FtsA; TIGRFAM: cell division protein FtsA YP_005061451.1 PFAM: POTRA domain, FtsQ-type YP_005061452.1 PFAM: Cell cycle protein; TIGRFAM: cell division protein FtsW YP_005061453.1 PFAM: Glycosyl transferase family 4; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase YP_005061454.1 PFAM: Mur ligase family, catalytic domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase YP_005061456.1 PFAM: MraW methylase family; TIGRFAM: S-adenosyl-methyltransferase MraW YP_005061457.1 PFAM: MraZ protein; TIGRFAM: mraZ protein YP_005061458.1 PFAM: Domain of unknown function (DUF1957); Glycosyl hydrolase family 57 YP_005061460.1 PFAM: Phosphorylase superfamily; TIGRFAM: purine-nucleoside phosphorylase, family 1 (deoD) YP_005061461.1 PFAM: Glycosyl hydrolase family 57; Domain of unknown function (DUF3536) YP_005061462.1 PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: DNA repair protein RecN YP_005061463.1 PFAM: ATP-NAD kinase YP_005061464.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family YP_005061466.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family YP_005061467.1 PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); TIGRFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_005061468.1 PFAM: Magnesium chelatase, subunit ChlI YP_005061469.1 PFAM: Aldehyde dehydrogenase family YP_005061471.1 PFAM: L-fucose isomerase, C-terminal domain YP_005061472.1 PFAM: Class II Aldolase and Adducin N-terminal domain; TIGRFAM: L-ribulose-5-phosphate 4-epimerase YP_005061473.1 PFAM: CBS domain; Voltage gated chloride channel YP_005061474.1 PFAM: Voltage gated chloride channel YP_005061475.1 PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase YP_005061476.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain YP_005061477.1 PFAM: Helix-turn-helix YP_005061478.1 PFAM: Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain YP_005061479.1 PFAM: Putative methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase YP_005061480.1 PFAM: Helicase conserved C-terminal domain; TRCF domain; CarD-like/TRCF domain; DEAD/DEAH box helicase; TIGRFAM: transcription-repair coupling factor (mfd) YP_005061481.1 PFAM: Inositol monophosphatase family YP_005061482.1 PFAM: Uncharacterized ACR, YhhQ family COG1738; TIGRFAM: conserved hypothetical integral membrane protein YP_005061483.1 PFAM: Protein of unknown function, DUF265 YP_005061485.1 PFAM: ATP cone domain; TIGRFAM: transcriptional regulator NrdR YP_005061486.1 PFAM: HD domain; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase, putative YP_005061488.1 PFAM: Shikimate kinase YP_005061489.1 PFAM: Chorismate synthase; TIGRFAM: chorismate synthase YP_005061490.1 PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit YP_005061492.1 PFAM: Shikimate dehydrogenase substrate binding domain; Type I 3-dehydroquinase; Shikimate / quinate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; 3-dehydroquinate dehydratase, type I YP_005061493.1 PFAM: ABC transporter YP_005061494.1 PFAM: Maf-like protein; TIGRFAM: MAF protein YP_005061495.1 PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type YP_005061496.1 PFAM: Elongation factor TS; UBA/TS-N domain; TIGRFAM: translation elongation factor Ts YP_005061497.1 PFAM: Ribosome recycling factor; TIGRFAM: ribosome recycling factor YP_005061498.1 PFAM: Putative undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase YP_005061499.1 PFAM: Cytidylyltransferase family YP_005061500.1 PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_005061501.1 PFAM: Peptidase family M50; TIGRFAM: RIP metalloprotease RseP YP_005061502.1 PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: replicative DNA helicase YP_005061503.1 PFAM: Ribosomal protein L9, N-terminal domain; Ribosomal protein L9, C-terminal domain; TIGRFAM: ribosomal protein L9 YP_005061505.1 PFAM: Ribosomal protein S18; TIGRFAM: ribosomal protein S18 YP_005061506.1 PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb) YP_005061507.1 PFAM: Ribosomal protein S6; TIGRFAM: ribosomal protein S6 YP_005061508.1 manually curated YP_005061509.1 PFAM: Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_005061510.1 PFAM: FemAB family YP_005061511.1 PFAM: tRNA synthetases class I (M); Putative tRNA binding domain; TIGRFAM: methionyl-tRNA synthetase C-terminal region/beta chain; methionyl-tRNA synthetase YP_005061512.1 PFAM: SPFH domain / Band 7 family; TIGRFAM: HflK protein YP_005061513.1 PFAM: SPFH domain / Band 7 family; TIGRFAM: HflC protein YP_005061514.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like YP_005061516.1 PFAM: ABC transporter YP_005061517.1 PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase YP_005061518.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region YP_005061519.1 PFAM: Glycosyl hydrolase family 20, catalytic domain YP_005061520.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005061521.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005061522.1 PFAM: Bacterial extracellular solute-binding protein YP_005061523.1 PFAM: ROK family YP_005061525.1 PFAM: Bacterial regulatory protein, arsR family; manually curated YP_005061526.1 PFAM: Citrate synthase; TIGRFAM: citrate synthase I (hexameric type) YP_005061527.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED YP_005061528.1 PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent, prokaryotic type YP_005061529.1 PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase); TIGRFAM: aconitate hydratase, putative, Aquifex type YP_005061530.1 PFAM: Major Facilitator Superfamily YP_005061531.1 PFAM: Divergent PAP2 family YP_005061532.1 PFAM: Bacterial extracellular solute-binding proteins, family 3 YP_005061533.1 PFAM: Bacterial extracellular solute-binding proteins, family 3 YP_005061534.1 PFAM: SNF2 Helicase protein; Helicase conserved C-terminal domain; SNF2 family N-terminal domain YP_005061535.1 PFAM: SWIM zinc finger YP_005061536.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family YP_005061537.1 PFAM: ABC transporter YP_005061538.1 PFAM: Haemolysin-III related; TIGRFAM: channel protein, hemolysin III family YP_005061539.1 PFAM: Redoxin YP_005061540.1 PFAM: Cytochrome C biogenesis protein transmembrane region YP_005061541.1 PFAM: NOL1/NOP2/sun family YP_005061542.1 PFAM: Domain of unknown function (DUF362) YP_005061543.1 PFAM: Putative small multi-drug export protein YP_005061544.1 PFAM: UvrD/REP helicase YP_005061550.1 PFAM: Alpha amylase, catalytic domain YP_005061552.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_005061553.1 PFAM: Glycosyl hydrolase family 1; TIGRFAM: beta-galactosidase YP_005061554.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED YP_005061555.1 PFAM: Aspartate-ammonia ligase; TIGRFAM: aspartate--ammonia ligase, AsnA-type YP_005061556.1 PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth) YP_005061557.1 PFAM: Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein TypA/BipA; small GTP-binding protein domain YP_005061558.1 PFAM: Major Facilitator Superfamily YP_005061559.1 PFAM: Acetyltransferase (GNAT) family YP_005061560.1 PFAM: Low molecular weight phosphotyrosine protein phosphatase YP_005061561.1 TIGRFAM: small redox-active disulfide protein 2 YP_005061562.1 PFAM: Predicted permease YP_005061563.1 PFAM: Bacterial regulatory protein, arsR family YP_005061564.1 PFAM: ABC transporter YP_005061565.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family YP_005061566.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family YP_005061567.1 PFAM: Bacterial extracellular solute-binding proteins, family 3 YP_005061568.1 PFAM: ABC transporter YP_005061569.1 PFAM: Branched-chain amino acid transport system / permease component YP_005061570.1 PFAM: Branched-chain amino acid transport system / permease component YP_005061571.1 PFAM: ABC transporter YP_005061572.1 PFAM: Basic membrane protein YP_005061573.1 PFAM: Sulfite exporter TauE/SafE YP_005061575.1 PFAM: Acetyltransferase (GNAT) family YP_005061576.1 PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; Beta-Casp domain YP_005061577.1 PFAM: Uncharacterised ACR, YkgG family COG1556 YP_005061578.1 PFAM: Iron-containing alcohol dehydrogenase YP_005061579.1 PFAM: Predicted membrane protein (DUF2078) YP_005061580.1 PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YP_005061581.1 PFAM: Universal stress protein family YP_005061582.1 PFAM: ATP synthase subunit D; TIGRFAM: H(+)-transporting ATP synthase, vacuolar type, subunit D YP_005061583.1 PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain YP_005061584.1 PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta family, nucleotide-binding domain; ATP synthase alpha/beta chain, C terminal domain YP_005061585.1 PFAM: ATP synthase (E/31 kDa) subunit YP_005061586.1 PFAM: ATP synthase (F/14-kDa) subunit YP_005061587.1 PFAM: ATP synthase subunit C YP_005061588.1 PFAM: V-type ATPase 116kDa subunit family YP_005061589.1 PFAM: ATP synthase (C/AC39) subunit YP_005061592.1 PFAM: Gram-negative pili assembly chaperone, N-terminal domain YP_005061593.1 PFAM: Bacterial regulatory proteins, tetR family YP_005061594.1 PFAM: Calcineurin-like phosphoesterase YP_005061597.1 PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein YP_005061598.1 PFAM: Glycosyl transferases group 1 YP_005061600.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_005061601.1 PFAM: Protein of unknown function (DUF1295) YP_005061602.1 PFAM: SelR domain; Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase; methionine-R-sulfoxide reductase YP_005061604.1 PFAM: AzlC protein; TIGRFAM: 4-azaleucine resistance probable transporter AzlC YP_005061605.1 PFAM: Branched-chain amino acid transport protein (AzlD) YP_005061606.1 PFAM: TatD related DNase YP_005061607.1 PFAM: ThiF family YP_005061610.1 PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family; tol-pal system-associated acyl-CoA thioesterase YP_005061611.1 PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase YP_005061612.1 PFAM: Aminotransferase class I and II; TIGRFAM: LL-diaminopimelate aminotransferase YP_005061613.1 PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase YP_005061614.1 PFAM: Dihydrodipicolinate reductase, N-terminus; Dihydrodipicolinate reductase, C-terminus; TIGRFAM: dihydrodipicolinate reductase YP_005061615.1 PFAM: Toprim domain; DNA topoisomerase; TIGRFAM: DNA topoisomerase III, bacteria and conjugative plasmid YP_005061618.1 PFAM: PAP2 superfamily YP_005061619.1 PFAM: 4Fe-4S binding domain YP_005061621.1 PFAM: Exonuclease VII, large subunit; OB-fold nucleic acid binding domain; TIGRFAM: exodeoxyribonuclease VII, large subunit YP_005061622.1 PFAM: Exonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit YP_005061623.1 PFAM: ACT domain; Formyl transferase; TIGRFAM: formyltetrahydrofolate deformylase YP_005061624.1 PFAM: Ammonium Transporter Family; Nitrogen regulatory protein P-II; TIGRFAM: ammonium transporter YP_005061625.1 PFAM: Thermophilic metalloprotease (M29) YP_005061626.1 PFAM: RNA pseudouridylate synthase; manually curated YP_005061627.1 PFAM: CBS domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_005061628.1 PFAM: DRTGG domain YP_005061629.1 PFAM: PHP domain YP_005061631.1 PFAM: Uncharacterised protein family UPF0005 YP_005061632.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family; manually curated YP_005061634.1 PFAM: MgsA AAA+ ATPase C terminal; Holliday junction DNA helicase ruvB N-terminus YP_005061635.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Bacterial trigger factor protein (TF) C-terminus; Bacterial trigger factor protein (TF); TIGRFAM: trigger factor YP_005061636.1 PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP YP_005061637.1 PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ClpX C4-type zinc finger; TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX) YP_005061638.1 PFAM: DHH family; DHHA1 domain YP_005061640.1 PFAM: Ham1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family YP_005061641.1 PFAM: Oligopeptidase F; Peptidase family M3; TIGRFAM: oligoendopeptidase F YP_005061642.1 PFAM: GDSL-like Lipase/Acylhydrolase YP_005061644.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_005061645.1 PFAM: Prolyl oligopeptidase family YP_005061647.1 PFAM: AcrB/AcrD/AcrF family YP_005061648.1 TIGRFAM: RND family efflux transporter, MFP subunit YP_005061649.1 PFAM: EAL domain; GGDEF domain YP_005061650.1 PFAM: Cation efflux family YP_005061652.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005061653.1 PFAM: ABC transporter YP_005061654.1 PFAM: NMT1/THI5 like YP_005061655.1 PFAM: Flavoprotein; TIGRFAM: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases YP_005061656.1 PFAM: UbiA prenyltransferase family; TIGRFAM: putative 4-hydroxybenzoate polyprenyltransferase YP_005061657.1 PFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: menaquinone biosynthesis decarboxylase, SCO4490 family; UbiD family decarboxylases YP_005061659.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_005061660.1 PFAM: Polyprenyl synthetase YP_005061662.1 PFAM: Family of unknown function (DUF438) YP_005061663.1 PFAM: Flavodoxin; Metallo-beta-lactamase superfamily YP_005061664.1 PFAM: CBS domain YP_005061665.1 PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein YP_005061666.1 PFAM: Bacterial regulatory protein, arsR family YP_005061667.1 PFAM: Iron-containing alcohol dehydrogenase YP_005061668.1 PFAM: Predicted permease YP_005061669.1 PFAM: Predicted permease YP_005061671.1 PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain YP_005061672.1 PFAM: Glycine radical; Pyruvate formate lyase; TIGRFAM: formate acetyltransferase 1 YP_005061673.1 PFAM: Radical SAM superfamily; TIGRFAM: pyruvate formate-lyase 1-activating enzyme YP_005061674.1 PFAM: Lipocalin-like domain YP_005061675.1 PFAM: Glutathione peroxidase YP_005061676.1 PFAM: Protein of unknown function (DUF1722); UV-endonuclease UvdE; TIGRFAM: UV damage endonuclease UvdE YP_005061679.1 PFAM: HD domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; uncharacterized domain HDIG; diguanylate cyclase (GGDEF) domain YP_005061680.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YP_005061682.1 PFAM: Rhodanese-like domain YP_005061687.1 TIGRFAM: uncharacterized proteobacterial lipoprotein YP_005061690.1 PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; Domain of unknown function (DUF3427) YP_005061691.1 PFAM: NUDIX domain; TIGRFAM: mutator mutT protein YP_005061692.1 PFAM: Competence protein CoiA-like family YP_005061694.1 PFAM: Methyltransferase domain YP_005061695.1 PFAM: Peptidase C1-like family YP_005061696.1 PFAM: Hydantoinase/oxoprolinase; Hydantoinase/oxoprolinase N-terminal region YP_005061697.1 PFAM: Protein of unknown function (DUF917) YP_005061698.1 PFAM: Permease for cytosine/purines, uracil, thiamine, allantoin YP_005061699.1 PFAM: Purine catabolism regulatory protein-like family YP_005061700.1 PFAM: Sir2 family YP_005061701.1 PFAM: ABC transporter YP_005061702.1 PFAM: Predicted permease YP_005061703.1 PFAM: Major Facilitator Superfamily YP_005061704.1 PFAM: Bacterial regulatory proteins, tetR family YP_005061705.1 PFAM: Competence protein CoiA-like family YP_005061706.1 PFAM: Restriction endonuclease YP_005061707.1 PFAM: Helix-turn-helix YP_005061709.1 PFAM: Macro domain YP_005061711.1 PFAM: Calcineurin-like phosphoesterase YP_005061712.1 PFAM: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) YP_005061713.1 PFAM: Amidohydrolase family YP_005061714.1 PFAM: Amidohydrolase family; TIGRFAM: adenine deaminase YP_005061715.1 PFAM: Bacterial extracellular solute-binding protein YP_005061716.1 PFAM: ABC transporter; TOBE domain YP_005061717.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005061718.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005061719.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: tryptophan synthase, beta subunit YP_005061720.1 PFAM: Tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit YP_005061721.1 PFAM: chorismate binding enzyme; Anthranilate synthase component I, N terminal region; TIGRFAM: anthranilate synthase component I, non-proteobacterial lineages YP_005061722.1 PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase YP_005061723.1 PFAM: Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: anthranilate phosphoribosyltransferase YP_005061724.1 PFAM: Indole-3-glycerol phosphate synthase YP_005061725.1 PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase YP_005061726.1 PFAM: EAL domain; PAS fold; TIGRFAM: PAS domain S-box YP_005061727.1 PFAM: Branched-chain amino acid transport protein; TIGRFAM: branched-chain amino acid uptake carrier YP_005061728.1 PFAM: Protein of unknown function DUF88 YP_005061729.1 PFAM: Protein of unknown function (DUF3307) YP_005061731.1 PFAM: Bacterial regulatory proteins, tetR family YP_005061732.1 PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Cation transporter/ATPase, N-terminus; haloacid dehalogenase-like hydrolase; TIGRFAM: plasma-membrane calcium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC YP_005061734.1 PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; [2Fe-2S] binding domain; TIGRFAM: selenium-dependent molybdenum hydroxylase 1 YP_005061735.1 PFAM: Nucleotidyl transferase YP_005061736.1 PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain YP_005061737.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain YP_005061738.1 PFAM: FAD binding domain in molybdopterin dehydrogenase; CO dehydrogenase flavoprotein C-terminal domain YP_005061739.1 PFAM: Protein of unknown function (DUF3494) YP_005061740.1 PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase YP_005061741.1 PFAM: Amidohydrolase family; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase YP_005061742.1 PFAM: Bacterial regulatory proteins, lacI family YP_005061743.1 PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family YP_005061744.1 PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component YP_005061745.1 PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit YP_005061746.1 PFAM: Uracil DNA glycosylase superfamily YP_005061747.1 PFAM: HI0933-like protein; manually curated YP_005061748.1 PFAM: Outer membrane efflux protein YP_005061749.1 TIGRFAM: RND family efflux transporter, MFP subunit YP_005061750.1 PFAM: AcrB/AcrD/AcrF family YP_005061751.1 PFAM: EamA-like transporter family YP_005061752.1 PFAM: ABC transporter YP_005061754.1 PFAM: D-ala D-ala ligase C-terminus; TIGRFAM: D-alanine--D-alanine ligase YP_005061755.1 PFAM: Acetyltransferase (GNAT) family YP_005061756.1 PFAM: Acetyltransferase (GNAT) family YP_005061757.1 PFAM: D-ala D-ala ligase C-terminus; TIGRFAM: D-alanine--D-alanine ligase YP_005061758.1 PFAM: D-ala D-ala ligase C-terminus; TIGRFAM: D-alanine--D-alanine ligase YP_005061759.1 PFAM: Lysine-2,3-aminomutase; Radical SAM superfamily; TIGRFAM: KamA family protein YP_005061761.1 PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group II YP_005061762.1 PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_005061763.1 PFAM: AP endonuclease family 2 C terminus; Xylose isomerase-like TIM barrel YP_005061764.1 PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold YP_005061765.1 PFAM: Branched-chain amino acid transport system / permease component YP_005061766.1 PFAM: ABC transporter YP_005061768.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_005061769.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain YP_005061770.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold YP_005061771.1 PFAM: Tripartite tricarboxylate transporter TctA family YP_005061773.1 PFAM: Tripartite tricarboxylate transporter family receptor YP_005061774.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_005061775.1 PFAM: SIS domain; TIGRFAM: N-acetylmuramic acid 6-phosphate etherase YP_005061776.1 PFAM: Bacterial extracellular solute-binding protein YP_005061777.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005061778.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005061779.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED YP_005061780.1 PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YP_005061781.1 PFAM: Beta-lactamase YP_005061782.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005061783.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005061784.1 PFAM: Bacterial extracellular solute-binding protein YP_005061785.1 PFAM: Uncharacterised protein family (UPF0075) YP_005061787.1 PFAM: Glycosyl hydrolase family 3 N terminal domain YP_005061788.1 PFAM: Protein of unknown function (DUF1343) YP_005061789.1 PFAM: SIS domain; Helix-turn-helix domain, rpiR family YP_005061790.1 PFAM: BadF/BadG/BcrA/BcrD ATPase family YP_005061791.1 PFAM: GtrA-like protein YP_005061792.1 PFAM: Glutathione peroxidase YP_005061793.1 PFAM: Metallo-beta-lactamase superfamily YP_005061794.1 PFAM: Glycerophosphoryl diester phosphodiesterase family; manually curated YP_005061795.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005061796.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005061797.1 PFAM: Bacterial extracellular solute-binding protein YP_005061798.1 PFAM: Protein of unknown function, DUF624 YP_005061802.1 PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family YP_005061803.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: diaminopropionate ammonia-lyase family; diaminopropionate ammonia-lyase YP_005061805.1 PFAM: ApbE family YP_005061806.1 PFAM: Glycosyl hydrolases family 31 YP_005061807.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005061808.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005061809.1 PFAM: Bacterial extracellular solute-binding protein YP_005061810.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_005061811.1 PFAM: Glycosyl hydrolase family 65 central catalytic domain; Glycosyl hydrolase family 65, N-terminal domain YP_005061812.1 PFAM: Protein of unknown function (DUF1237) YP_005061814.1 PFAM: ABC transporter transmembrane region; ABC transporter YP_005061815.1 PFAM: ABC transporter; ABC transporter transmembrane region YP_005061816.1 PFAM: alpha/beta hydrolase fold YP_005061817.1 PFAM: HipA-like N-terminal domain; HipA-like C-terminal domain YP_005061818.1 TIGRFAM: HipA N-terminal domain YP_005061819.1 PFAM: Helix-turn-helix; TIGRFAM: transcriptional regulator, y4mF family YP_005061820.1 PFAM: HhH-GPD superfamily base excision DNA repair protein YP_005061821.1 PFAM: HNH endonuclease YP_005061822.1 PFAM: YbaK / prolyl-tRNA synthetases associated domain YP_005061823.1 PFAM: NUDIX domain YP_005061824.1 PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YP_005061825.1 PFAM: Sodium/hydrogen exchanger family YP_005061826.1 PFAM: GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I YP_005061827.1 PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG YP_005061828.1 PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase YP_005061829.1 PFAM: Dihydroneopterin aldolase; TIGRFAM: dihydroneopterin aldolase; FolB domain YP_005061830.1 PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase YP_005061832.1 PFAM: ApbE family YP_005061833.1 PFAM: FMN-binding domain YP_005061834.1 TIGRFAM: exonuclease SbcC YP_005061835.1 PFAM: Calcineurin-like phosphoesterase; Type 5 capsule protein repressor C terminal; TIGRFAM: exonuclease SbcD YP_005061837.1 PFAM: Major Facilitator Superfamily; TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter YP_005061838.1 PFAM: GlcNAc-PI de-N-acetylase YP_005061839.1 PFAM: Heavy-metal-associated domain YP_005061840.1 PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC YP_005061842.1 PFAM: Major Facilitator Superfamily YP_005061844.1 PFAM: Branched-chain amino acid transport system / permease component YP_005061845.1 PFAM: ABC transporter YP_005061846.1 PFAM: AP endonuclease family 2 C terminus; Xylose isomerase-like TIM barrel YP_005061847.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold YP_005061848.1 PFAM: Bacterial protein of unknown function (DUF898) YP_005061849.1 PFAM: Xylose isomerase-like TIM barrel YP_005061850.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain YP_005061851.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_005061853.1 PFAM: Domain of unknown function (DU1801) YP_005061855.1 PFAM: Calcineurin-like phosphoesterase; TIGRFAM: phosphoesterase, MJ0936 family YP_005061856.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_005061857.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_005061858.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_005061859.1 PFAM: Protein of unknown function (DUF1312) YP_005061860.1 PFAM: Heptaprenyl diphosphate synthase component I YP_005061861.1 PFAM: Aldehyde dehydrogenase family; Iron-containing alcohol dehydrogenase YP_005061862.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB YP_005061863.1 PFAM: Major Facilitator Superfamily YP_005061866.1 PFAM: Helix-turn-helix YP_005061867.1 PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type YP_005061868.1 PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase YP_005061869.1 PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase YP_005061870.1 PFAM: Aconitase C-terminal domain; TIGRFAM: 3-isopropylmalate dehydratase, small subunit YP_005061871.1 PFAM: Aconitase family (aconitate hydratase); TIGRFAM: 3-isopropylmalate dehydratase, large subunit; homoaconitate hydratase family protein YP_005061872.1 PFAM: LeuA allosteric (dimerisation) domain; HMGL-like; TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein YP_005061873.1 PFAM: HMGL-like; LeuA allosteric (dimerisation) domain; TIGRFAM: 2-isopropylmalate synthase, bacterial type YP_005061874.1 PFAM: Acetohydroxy acid isomeroreductase, catalytic domain; TIGRFAM: ketol-acid reductoisomerase YP_005061875.1 PFAM: ACT domain; Small subunit of acetolactate synthase; TIGRFAM: acetolactate synthase, small subunit YP_005061877.1 PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_005061878.1 PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family YP_005061879.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED YP_005061880.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005061881.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005061882.1 PFAM: Bacterial extracellular solute-binding protein YP_005061883.1 PFAM: Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain YP_005061884.1 PFAM: FeoA domain YP_005061885.1 PFAM: Ferrous iron transport protein B; Ferrous iron transport protein B C terminus; Nucleoside recognition; TIGRFAM: ferrous iron transporter FeoB; small GTP-binding protein domain YP_005061887.1 PFAM: Bacterial extracellular solute-binding proteins, family 3 YP_005061888.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family YP_005061889.1 PFAM: ABC transporter YP_005061890.1 PFAM: D-aminoacylase, C-terminal region; Amidohydrolase family YP_005061892.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_005061893.1 PFAM: Prolyl oligopeptidase family YP_005061894.1 PFAM: EAL domain; GGDEF domain YP_005061895.1 PFAM: Inosine-uridine preferring nucleoside hydrolase YP_005061896.1 PFAM: Nitroreductase family YP_005061897.1 PFAM: Phosphorylase superfamily; TIGRFAM: purine-nucleoside phosphorylase, family 1 (deoD) YP_005061898.1 PFAM: Branched-chain amino acid transport system / permease component YP_005061899.1 PFAM: Branched-chain amino acid transport system / permease component YP_005061900.1 PFAM: ABC transporter YP_005061901.1 PFAM: Basic membrane protein YP_005061902.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB YP_005061903.1 PFAM: BFD-like [2Fe-2S] binding domain; manually curated YP_005061904.1 PFAM: PPIC-type PPIASE domain YP_005061905.1 PFAM: Calcineurin-like phosphoesterase YP_005061906.1 PFAM: Protein of unknown function (DUF2804) YP_005061907.1 PFAM: Helicase conserved C-terminal domain; DbpA RNA binding domain; DEAD/DEAH box helicase YP_005061910.1 PFAM: MMPL family; TIGRFAM: The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family YP_005061911.1 PFAM: Glycosyl transferases group 1 YP_005061914.1 PFAM: MMPL family; TIGRFAM: The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family YP_005061917.1 PFAM: Glycosyl transferase family 2 YP_005061920.1 PFAM: Bacterial sugar transferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase YP_005061921.1 PFAM: Glycosyl transferase family 8 YP_005061922.1 PFAM: Trp repressor protein; TIGRFAM: trp operon repressor, proteobacterial YP_005061923.1 PFAM: Rubrerythrin; VIT family YP_005061924.1 PFAM: Aldo/keto reductase family YP_005061925.1 PFAM: EamA-like transporter family YP_005061926.1 PFAM: Membrane transport protein YP_005061927.1 PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: xylose isomerase YP_005061928.1 PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: D-xylulose kinase YP_005061929.1 PFAM: AraC-like ligand binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family YP_005061931.1 PFAM: pfkB family carbohydrate kinase; TIGRFAM: ribokinase YP_005061932.1 PFAM: Phospholipase D Active site motif YP_005061933.1 PFAM: Uncharacterized BCR, COG1636 YP_005061935.1 PFAM: Patatin-like phospholipase YP_005061937.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family YP_005061938.1 PFAM: Phage integrase family YP_005061939.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family YP_005061947.1 PFAM: Preprotein translocase subunit SecB YP_005061948.1 PFAM: Protein of unknown function (DUF2806) YP_005061951.1 PFAM: Low molecular weight phosphotyrosine protein phosphatase YP_005061952.1 PFAM: Plasmid pRiA4b ORF-3-like protein YP_005061953.1 PFAM: Sodium:dicarboxylate symporter family YP_005061954.1 PFAM: Bacterial regulatory protein, arsR family YP_005061955.1 PFAM: Protein of unknown function (DUF1648) YP_005061956.1 PFAM: YceG-like family; TIGRFAM: conserved hypothetical protein, YceG family YP_005061958.1 PFAM: DbpA RNA binding domain YP_005061959.1 PFAM: Metallo-beta-lactamase superfamily YP_005061960.1 PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain YP_005061961.1 PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: RNA polymerase-binding protein DksA; manually curated YP_005061962.1 PFAM: ABC transporter; ATP-binding cassette cobalt transporter; Cobalt transport protein YP_005061963.1 PFAM: Protein of unknown function (DUF1393) YP_005061964.1 PFAM: S-adenosyl-l-methionine hydroxide adenosyltransferase YP_005061966.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein YP_005061967.1 PFAM: Cobalamin-5-phosphate synthase; TIGRFAM: cobalamin 5'-phosphate synthase/cobalamin synthase YP_005061968.1 PFAM: Cobinamide kinase / cobinamide phosphate guanyltransferase YP_005061969.1 PFAM: Xylose isomerase-like TIM barrel YP_005061970.1 PFAM: Phosphoribosyltransferase; TIGRFAM: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase YP_005061971.1 PFAM: Protein of unknown function, DUF606 YP_005061972.1 PFAM: HhH-GPD superfamily base excision DNA repair protein YP_005061973.1 PFAM: Domain of unknown function DUF20 YP_005061974.1 PFAM: SpoU rRNA Methylase family; TIGRFAM: RNA methyltransferase, TrmH family, group 1; manually curated YP_005061975.1 PFAM: Glycerophosphoryl diester phosphodiesterase family YP_005061976.1 PFAM: 4Fe-4S binding domain; Domain of unknown function (DUF362) YP_005061977.1 PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; TIGRFAM: glucosamine-6-phosphate isomerase YP_005061978.1 PFAM: tRNA methyl transferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase YP_005061979.1 PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain YP_005061980.1 PFAM: FAD binding domain in molybdopterin dehydrogenase; CO dehydrogenase flavoprotein C-terminal domain YP_005061981.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain YP_005061982.1 PFAM: PAP2 superfamily YP_005061983.1 PFAM: Exonuclease YP_005061984.1 PFAM: Serine dehydratase alpha chain YP_005061985.1 PFAM: Phosphomannose isomerase type I; TIGRFAM: mannose-6-phosphate isomerase, class I YP_005061986.1 PFAM: Na+/H+ antiporter family YP_005061987.1 PFAM: X-Pro dipeptidyl-peptidase (S15 family) YP_005061990.1 PFAM: AMP-binding enzyme YP_005061991.1 PFAM: Bacterial regulatory proteins, gntR family; UTRA domain YP_005061993.1 PFAM: Encapsulating protein for peroxidase YP_005061994.1 PFAM: ABC transporter; TOBE domain YP_005061996.1 PFAM: Amino acid kinase family; TIGRFAM: aspartate kinase YP_005061997.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family YP_005061998.1 PFAM: Glutamine amidotransferase class-I; GMP synthase C terminal domain; NAD synthase; TIGRFAM: GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit YP_005061999.1 PFAM: Protein of unknown function (DUF1393) YP_005062000.1 PFAM: Cobalt transport protein YP_005062001.1 PFAM: ABC transporter YP_005062002.1 PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases YP_005062003.1 PFAM: ABC transporter transmembrane region; ABC transporter YP_005062004.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase YP_005062005.1 PFAM: Aminotransferase class IV YP_005062006.1 PFAM: Ftsk gamma domain; FtsK/SpoIIIE family YP_005062007.1 PFAM: rRNA small subunit methyltransferase G; TIGRFAM: 16S rRNA (guanine(527)-N(7))-methyltransferase GidB YP_005062008.1 PFAM: Glucose inhibited division protein A; TIGRFAM: glucose-inhibited division protein A YP_005062009.1 PFAM: GTPase of unknown function; GTP-binding protein TrmE N-terminus; TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein domain YP_005062010.1 PFAM: tRNA synthetases class II (D, K and N) YP_005062011.1 PFAM: Elongation factor P, C-terminal; Elongation factor P (EF-P) KOW-like domain; Elongation factor P (EF-P) OB domain; TIGRFAM: translation elongation factor P YP_005062012.1 PFAM: Prismane/CO dehydrogenase family; TIGRFAM: hydroxylamine reductase YP_005062013.1 PFAM: Cupin domain YP_005062015.1 PFAM: Domain of unknown function DUF YP_005062016.1 PFAM: Major Facilitator Superfamily YP_005062017.1 PFAM: Radical SAM superfamily; TIGRFAM: KamA family protein YP_005062019.1 PFAM: Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase YP_005062020.1 PFAM: 5'-3' exonuclease, C-terminal SAM fold; 3'-5' exonuclease; 5'-3' exonuclease, N-terminal resolvase-like domain; DNA polymerase family A; TIGRFAM: DNA polymerase I YP_005062021.1 PFAM: Metallo-beta-lactamase superfamily YP_005062025.1 PFAM: NAD synthase; Carbon-nitrogen hydrolase; TIGRFAM: NAD+ synthetase YP_005062026.1 PFAM: tRNA (Uracil-5-)-methyltransferase YP_005062027.1 PFAM: Oligopeptidase F; Peptidase family M3; TIGRFAM: oligoendopeptidase, pepF/M3 family YP_005062028.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain YP_005062029.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_005062030.1 PFAM: Predicted permease YP_005062031.1 PFAM: ABC transporter YP_005062032.1 PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit YP_005062034.1 PFAM: short chain dehydrogenase YP_005062035.1 PFAM: FtsH Extracellular; Peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH YP_005062036.1 PFAM: Hsp33 protein YP_005062037.1 PFAM: Putative RNA methylase family UPF0020; S-adenosylmethionine-dependent methyltransferase; THUMP domain YP_005062038.1 PFAM: Methyltransferase domain YP_005062040.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YP_005062042.1 PFAM: Fic/DOC family YP_005062044.1 PFAM: Possible lysine decarboxylase; TIGRFAM: TIGR00725 family protein; TIGR00730 family protein YP_005062045.1 PFAM: Uncharacterized BCR, YitT family COG1284; Uncharacterized protein conserved in bacteria (DUF2179) YP_005062049.1 PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain YP_005062050.1 TIGRFAM: metallophosphoesterase, MG_246/BB_0505 family YP_005062051.1 PFAM: Positive regulator of sigma(E), RseC/MucC YP_005062052.1 PFAM: Protein of unknown function (DUF1239) YP_005062053.1 PFAM: OstA-like protein YP_005062054.1 PFAM: ABC transporter YP_005062055.1 PFAM: Sigma-54 factor, Activator interacting domain (AID); Sigma-54 factor, core binding domain; Sigma-54, DNA binding domain; TIGRFAM: RNA polymerase sigma-54 factor YP_005062056.1 PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein YP_005062057.1 PFAM: HPr Serine kinase N terminus; HPr Serine kinase C-terminal domain; TIGRFAM: Hpr(Ser) kinase/phosphatase YP_005062058.1 PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family YP_005062059.1 PFAM: LexA DNA binding domain; Peptidase S24-like; TIGRFAM: SOS regulatory protein LexA YP_005062060.1 PFAM: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit YP_005062061.1 PFAM: UvrB/uvrC motif; UvrC Helix-hairpin-helix N-terminal; GIY-YIG catalytic domain; TIGRFAM: excinuclease ABC, C subunit YP_005062063.1 PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain) YP_005062064.1 PFAM: Thymidylate synthase complementing protein; TIGRFAM: thymidylate synthase, flavin-dependent YP_005062065.1 PFAM: RNA methyltransferase; TIGRFAM: RNA methyltransferase, RsmE family YP_005062066.1 PFAM: Bacterial lipoate protein ligase C-terminus; Biotin/lipoate A/B protein ligase family; TIGRFAM: lipoyltransferase and lipoate-protein ligase YP_005062067.1 PFAM: 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase YP_005062068.1 PFAM: CarD-like/TRCF domain YP_005062069.1 PFAM: Uncharacterized protein family UPF0007; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_005062070.1 PFAM: YgbB family; TIGRFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_005062074.1 PFAM: DNA methylase YP_005062076.1 PFAM: Helix-turn-helix; Peptidase S24-like YP_005062077.1 PFAM: Protein of unknown function (DUF2807) YP_005062078.1 PFAM: Subtilase family YP_005062081.1 PFAM: Ketopantoate reductase PanE/ApbA; Ketopantoate reductase PanE/ApbA C terminal; TIGRFAM: 2-dehydropantoate 2-reductase YP_005062082.1 PFAM: Protein of unknown function, DUF1537 YP_005062083.1 PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases YP_005062084.1 PFAM: Sodium/glutamate symporter YP_005062085.1 PFAM: ABC transporter YP_005062087.1 PFAM: Bacterial regulatory proteins, gntR family YP_005062089.1 PFAM: NPCBM-associated, NEW3 domain of alpha-galactosidase YP_005062090.1 PFAM: ABC transporter YP_005062092.1 PFAM: ABC transporter YP_005062093.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: molybdate ABC transporter, permease protein YP_005062094.1 PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein YP_005062095.1 PFAM: Probable molybdopterin binding domain; MOSC domain; TIGRFAM: molybdenum cofactor synthesis domain YP_005062096.1 PFAM: Molybdenum Cofactor Synthesis C; Radical SAM superfamily; TIGRFAM: molybdenum cofactor biosynthesis protein A, bacterial YP_005062097.1 PFAM: MoaC family; TIGRFAM: molybdenum cofactor biosynthesis protein MoaC YP_005062098.1 PFAM: Probable molybdopterin binding domain YP_005062099.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; TIGRFAM: ModE molybdate transport repressor domain YP_005062103.1 PFAM: ROK family YP_005062104.1 PFAM: SIS domain YP_005062105.1 PFAM: MarR family YP_005062106.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005062107.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005062108.1 PFAM: Bacterial extracellular solute-binding protein YP_005062109.1 PFAM: MerR family regulatory protein; MerR, DNA binding YP_005062110.1 PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc YP_005062113.1 PFAM: Protein of unknown function(DUF2089) YP_005062114.1 PFAM: HTH domain; manually curated YP_005062115.1 manually curated YP_005062116.1 PFAM: Isochorismatase family YP_005062117.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; Rhodanese-like domain YP_005062118.1 PFAM: Uncharacterized conserved protein (DUF2358) YP_005062119.1 PFAM: short chain dehydrogenase YP_005062120.1 PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; Phosphoribosyl-AMP cyclohydrolase; TIGRFAM: phosphoribosyl-ATP pyrophosphohydrolase YP_005062121.1 PFAM: Histidine biosynthesis protein; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit YP_005062122.1 PFAM: Histidine biosynthesis protein; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase YP_005062123.1 PFAM: Glutamine amidotransferase class-I; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit YP_005062124.1 PFAM: Imidazoleglycerol-phosphate dehydratase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIIA; histidinol-phosphate phosphatase family domain; histidinol-phosphatase YP_005062125.1 PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase YP_005062126.1 PFAM: Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase YP_005062127.1 PFAM: HisG, C-terminal domain; ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase, C-terminal domain; ATP phosphoribosyltransferase YP_005062128.1 PFAM: RelB antitoxin YP_005062130.1 PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YP_005062131.1 PFAM: Na+/H+ ion antiporter subunit YP_005062132.1 PFAM: Multiple resistance and pH regulation protein F (MrpF / PhaF) YP_005062133.1 PFAM: Na+/H+ antiporter subunit; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit YP_005062135.1 PFAM: Domain related to MnhB subunit of Na+/H+ antiporter YP_005062136.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L YP_005062137.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains YP_005062140.1 PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: N-acetylneuraminate lyase YP_005062141.1 PFAM: short chain dehydrogenase YP_005062142.1 PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit YP_005062143.1 PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component YP_005062144.1 PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family YP_005062145.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_005062147.1 PFAM: tRNA synthetase B5 domain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit YP_005062148.1 PFAM: tRNA synthetases class II core domain (F); TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit YP_005062149.1 PFAM: Dehydrogenase E1 component; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain YP_005062150.1 PFAM: Flavin reductase like domain; conserved protein of DIM6/NTAB family YP_005062151.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase YP_005062152.1 PFAM: Phosphoribosyl transferase domain YP_005062153.1 PFAM: Adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthase YP_005062154.1 PFAM: ABC transporter YP_005062155.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family YP_005062156.1 PFAM: Bacterial extracellular solute-binding proteins, family 3 YP_005062157.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_005062159.1 PFAM: CobW/HypB/UreG, nucleotide-binding domain; TIGRFAM: hydrogenase accessory protein HypB YP_005062160.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S binding domain YP_005062161.1 PFAM: Hydrogenase expression/synthesis hypA family; TIGRFAM: hydrogenase nickel insertion protein HypA YP_005062162.1 PFAM: Methyltransferase domain YP_005062163.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family YP_005062165.1 PFAM: Protein of unknown function DUF134 YP_005062166.1 PFAM: Dinitrogenase iron-molybdenum cofactor YP_005062167.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_005062168.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_005062169.1 PFAM: Metallo-beta-lactamase superfamily YP_005062170.1 PFAM: ParA/MinD ATPase like; Dinitrogenase iron-molybdenum cofactor YP_005062171.1 PFAM: PHP domain; TIGRFAM: histidinol phosphate phosphatase HisJ family YP_005062172.1 PFAM: Tripartite tricarboxylate transporter family receptor YP_005062173.1 PFAM: Bacterial extracellular solute-binding protein YP_005062174.1 PFAM: ABC transporter YP_005062175.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005062176.1 PFAM: ABC transporter; TOBE domain YP_005062177.1 PFAM: Bacterial extracellular solute-binding protein YP_005062178.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family YP_005062179.1 PFAM: Bacterial extracellular solute-binding protein YP_005062180.1 PFAM: Lyase; Adenylosuccinate lyase C-terminus; TIGRFAM: adenylosuccinate lyase YP_005062181.1 PFAM: short chain dehydrogenase YP_005062183.1 PFAM: Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetases class II (A) YP_005062184.1 PFAM: UPF0126 domain YP_005062186.1 PFAM: Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain YP_005062187.1 PFAM: Malate/L-lactate dehydrogenase YP_005062188.1 PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain YP_005062191.1 PFAM: ABC transporter YP_005062192.1 PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter YP_005062193.1 PFAM: Branched-chain amino acid transport system / permease component YP_005062194.1 PFAM: Branched-chain amino acid transport system / permease component YP_005062195.1 PFAM: Receptor family ligand binding region YP_005062201.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_005062202.1 PFAM: Biopolymer transport protein ExbD/TolR YP_005062203.1 PFAM: Biopolymer transport protein ExbD/TolR YP_005062204.1 PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain YP_005062206.1 PFAM: Melibiase YP_005062207.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_005062208.1 PFAM: Acetyltransferase (GNAT) family YP_005062209.1 PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus YP_005062211.1 PFAM: Protein of unknown function (DUF541) YP_005062212.1 PFAM: NUDIX domain YP_005062213.1 PFAM: ParA/MinD ATPase like; ATPase MipZ YP_005062214.1 PFAM: Oxaloacetate decarboxylase, gamma chain; TIGRFAM: sodium pump decarboxylases, gamma subunit YP_005062215.1 PFAM: HMGL-like; Conserved carboxylase domain; Biotin-requiring enzyme YP_005062216.1 PFAM: subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit YP_005062217.1 PFAM: PGAP1-like protein YP_005062218.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region YP_005062219.1 PFAM: pfkB family carbohydrate kinase YP_005062220.1 PFAM: Basic membrane protein YP_005062221.1 PFAM: ABC transporter YP_005062222.1 PFAM: Branched-chain amino acid transport system / permease component YP_005062223.1 PFAM: Branched-chain amino acid transport system / permease component YP_005062224.1 PFAM: Abi-like protein YP_005062225.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; [2Fe-2S] binding domain; TIGRFAM: selenium-dependent molybdenum hydroxylase 1 YP_005062227.1 PFAM: Bacterial transcription activator, effector binding domain YP_005062228.1 PFAM: Amidohydrolase family YP_005062229.1 PFAM: Purine nucleoside permease (NUP) YP_005062230.1 PFAM: 2-nitropropane dioxygenase YP_005062231.1 PFAM: Pyridoxamine 5'-phosphate oxidase YP_005062232.1 PFAM: ABC transporter transmembrane region; ABC transporter YP_005062233.1 PFAM: ABC transporter transmembrane region; ABC transporter YP_005062234.1 PFAM: MarR family YP_005062235.1 PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain YP_005062236.1 PFAM: Amidohydrolase family YP_005062237.1 PFAM: Branched-chain amino acid transport system / permease component YP_005062238.1 PFAM: Branched-chain amino acid transport system / permease component YP_005062239.1 PFAM: ABC transporter YP_005062240.1 PFAM: Basic membrane protein YP_005062241.1 PFAM: BtpA family; TIGRFAM: membrane complex biogenesis protein, BtpA family YP_005062242.1 PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain YP_005062243.1 PFAM: Iron-containing alcohol dehydrogenase YP_005062244.1 PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit YP_005062245.1 PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component YP_005062246.1 PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family YP_005062247.1 PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase YP_005062248.1 PFAM: KduI/IolB family YP_005062249.1 PFAM: Cupin domain YP_005062250.1 PFAM: Bacterial regulatory proteins, lacI family YP_005062251.1 PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit YP_005062252.1 PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component YP_005062253.1 PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family YP_005062254.1 PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_005062255.1 PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family YP_005062256.1 PFAM: Xylose isomerase-like TIM barrel YP_005062257.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005062258.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005062259.1 PFAM: Bacterial extracellular solute-binding protein YP_005062260.1 PFAM: Helix-turn-helix domain, rpiR family; SIS domain YP_005062261.1 PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; 6-phosphogluconate dehydrogenase, C-terminal domain; TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating YP_005062262.1 PFAM: pfkB family carbohydrate kinase YP_005062263.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase YP_005062264.1 PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold YP_005062265.1 PFAM: ADP-ribosylglycohydrolase YP_005062266.1 PFAM: ADP-ribosylglycohydrolase YP_005062267.1 PFAM: Bacterial extracellular solute-binding protein YP_005062268.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005062269.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005062271.1 PFAM: Protein of unknown function (DUF1446) YP_005062272.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_005062273.1 PFAM: haloacid dehalogenase-like hydrolase; Glycosyl hydrolase family 65 central catalytic domain; Glycosyl hydrolase family 65, N-terminal domain; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; beta-phosphoglucomutase family hydrolase; beta-phosphoglucomutase YP_005062274.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_005062275.1 PFAM: Bacterial extracellular solute-binding protein YP_005062276.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005062277.1 PFAM: ABC transporter; TOBE domain YP_005062278.1 PFAM: Asparaginase YP_005062279.1 PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; TIGRFAM: 2-hydroxy-3-oxopropionate reductase YP_005062280.1 PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain YP_005062281.1 PFAM: Transketolase, thiamine diphosphate binding domain YP_005062282.1 PFAM: short chain dehydrogenase YP_005062283.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase YP_005062284.1 PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit YP_005062285.1 PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component YP_005062286.1 PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family YP_005062287.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_005062289.1 PFAM: subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit YP_005062290.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2263); TIGRFAM: TIGR02452 family protein YP_005062291.1 PFAM: FR47-like protein YP_005062292.1 PFAM: AraC-like ligand binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family YP_005062293.1 PFAM: Iron-containing alcohol dehydrogenase YP_005062294.1 PFAM: Sulfate transporter family; STAS domain YP_005062295.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: lactoylglutathione lyase YP_005062297.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family YP_005062298.1 PFAM: Glycosyl hydrolases family 2, sugar binding domain YP_005062299.1 PFAM: 3-dehydroquinate synthase YP_005062300.1 PFAM: GDSL-like Lipase/Acylhydrolase YP_005062301.1 PFAM: Bacterial extracellular solute-binding protein YP_005062302.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005062303.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005062305.1 PFAM: Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit YP_005062306.1 PFAM: Carboxyl transferase domain; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit YP_005062307.1 PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase subunit YP_005062308.1 PFAM: Biotin-requiring enzyme; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_005062309.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III YP_005062310.1 PFAM: Acyl transferase domain YP_005062311.1 PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase YP_005062312.1 PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: beta-ketoacyl-acyl-carrier-protein synthase II YP_005062313.1 PFAM: FabA-like domain YP_005062314.1 PFAM: Trans-2-enoyl-CoA reductase catalytic region; NAD(P)H binding domain of trans-2-enoyl-CoA reductase; Enoyl reductase FAD binding domain YP_005062315.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_005062316.1 PFAM: Chromate transporter YP_005062317.1 PFAM: Chromate transporter YP_005062318.1 TIGRFAM: anaerobic sulfatase-maturating enzyme; radical SAM additional 4Fe4S-binding domain YP_005062319.1 PFAM: Bacterial regulatory proteins, gntR family YP_005062320.1 PFAM: Sulfatase YP_005062321.1 PFAM: Tripartite tricarboxylate transporter TctA family YP_005062323.1 PFAM: Tripartite tricarboxylate transporter family receptor YP_005062324.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_005062325.1 PFAM: Sulfatase YP_005062326.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005062327.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005062328.1 PFAM: Bacterial extracellular solute-binding protein YP_005062329.1 PFAM: Predicted histidine kinase sensor domain; Bacterial regulatory helix-turn-helix proteins, AraC family YP_005062330.1 PFAM: Phosphotransferase enzyme family YP_005062331.1 PFAM: Bacterial extracellular solute-binding protein YP_005062332.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005062333.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005062335.1 PFAM: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) YP_005062336.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_005062337.1 PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: N-acetylneuraminate lyase YP_005062338.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain YP_005062339.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain YP_005062340.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005062341.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005062342.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_005062343.1 PFAM: Aminoglycoside 3-N-acetyltransferase YP_005062344.1 PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain YP_005062345.1 PFAM: Branched-chain amino acid transport system / permease component YP_005062346.1 PFAM: Branched-chain amino acid transport system / permease component YP_005062347.1 PFAM: ABC transporter YP_005062348.1 PFAM: family YP_005062349.1 PFAM: Class II Aldolase and Adducin N-terminal domain; TIGRFAM: L-ribulose-5-phosphate 4-epimerase YP_005062350.1 PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain YP_005062351.1 PFAM: Bacterial regulatory proteins, lacI family YP_005062352.1 PFAM: FAD binding domain YP_005062353.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005062354.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005062355.1 PFAM: Bacterial extracellular solute-binding protein YP_005062356.1 PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_005062358.1 PFAM: Protein of unknown function (DUF3089) YP_005062359.1 PFAM: Alpha-acetolactate decarboxylase; TIGRFAM: alpha-acetolactate decarboxylase YP_005062362.1 PFAM: Prolyl oligopeptidase family YP_005062363.1 PFAM: Bacterial extracellular solute-binding protein YP_005062364.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005062365.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005062366.1 PFAM: Glycosyl hydrolases family 31 YP_005062367.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_005062368.1 PFAM: Xylose isomerase-like TIM barrel YP_005062369.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005062370.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005062371.1 PFAM: Bacterial extracellular solute-binding protein YP_005062372.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain YP_005062373.1 PFAM: ROK family YP_005062374.1 PFAM: Cupin domain; manually curated; non-canonical start codon YP_005062375.1 PFAM: Iron-containing alcohol dehydrogenase YP_005062376.1 PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: phosphonopyruvate decarboxylase YP_005062377.1 PFAM: Cytidylyltransferase; TIGRFAM: phosphoenolpyruvate phosphomutase; cytidyltransferase-related domain YP_005062378.1 PFAM: Nucleotidyl transferase YP_005062379.1 PFAM: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase YP_005062380.1 PFAM: 60Kd inner membrane protein; Sulfatase; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain YP_005062381.1 PFAM: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase YP_005062382.1 PFAM: Polysaccharide biosynthesis protein YP_005062383.1 PFAM: O-Antigen ligase YP_005062384.1 PFAM: Glycosyl transferases group 1 YP_005062385.1 PFAM: NAD dependent epimerase/dehydratase family YP_005062386.1 PFAM: Uncharacterized protein family UPF0007; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_005062387.1 PFAM: LICD Protein Family YP_005062388.1 PFAM: NAD dependent epimerase/dehydratase family YP_005062389.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase YP_005062390.1 PFAM: Polysaccharide biosynthesis protein YP_005062391.1 PFAM: Bacterial capsule synthesis protein PGA_cap YP_005062393.1 PFAM: Nucleotidyl transferase YP_005062395.1 PFAM: Polysaccharide biosynthesis protein YP_005062396.1 PFAM: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase YP_005062397.1 PFAM: Glycosyl transferases group 1 YP_005062399.1 PFAM: Glycosyl transferases group 1 YP_005062400.1 PFAM: Glycosyl transferases group 1 YP_005062402.1 PFAM: Bacterial sugar transferase YP_005062403.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family YP_005062404.1 PFAM: Polysaccharide biosynthesis protein YP_005062405.1 PFAM: Iron-containing alcohol dehydrogenase YP_005062406.1 PFAM: Divergent AAA domain YP_005062408.1 PFAM: Beta-galactosidase YP_005062409.1 PFAM: Bacterial extracellular solute-binding protein YP_005062410.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005062411.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005062413.1 PFAM: ROK family YP_005062414.1 PFAM: Helix-turn-helix domain, rpiR family; SIS domain YP_005062416.1 PFAM: Aldose 1-epimerase; manually curated YP_005062418.1 PFAM: Glycosyl hydrolases family 31 YP_005062419.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005062420.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005062421.1 PFAM: Bacterial extracellular solute-binding protein YP_005062422.1 PFAM: Bacterial regulatory proteins, lacI family YP_005062423.1 PFAM: Fic/DOC family YP_005062424.1 PFAM: Helix-turn-helix YP_005062430.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2188) YP_005062436.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_005062437.1 PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family YP_005062438.1 PFAM: Bacterial extracellular solute-binding protein YP_005062439.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005062440.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005062443.1 PFAM: Transposase IS200 like YP_005062444.1 PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA; manually curated YP_005062445.1 PFAM: Magnesium chelatase, subunit ChlI; TIGRFAM: Mg chelatase-related protein YP_005062448.1 PFAM: Domain of unknown function (DUF1814) YP_005062452.1 PFAM: Preprotein translocase subunit SecB YP_005062455.1 PFAM: Transposase IS66 family YP_005062456.1 PFAM: IS66 Orf2 like protein YP_005062457.1 PFAM: Transposase YP_005062458.1 PFAM: Transposase IS66 family YP_005062459.1 PFAM: IS66 Orf2 like protein YP_005062460.1 PFAM: Transposase YP_005062461.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase YP_005062462.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase YP_005062463.1 PFAM: Polysaccharide biosynthesis protein YP_005062464.1 PFAM: Bacterial transferase hexapeptide (three repeats) YP_005062466.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; manually curated YP_005062467.1 PFAM: Phage integrase family YP_005062468.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family YP_005062471.1 PFAM: NAD dependent epimerase/dehydratase family YP_005062472.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: GDP-mannose 4,6-dehydratase YP_005062473.1 PFAM: Glycosyl transferases group 1 YP_005062474.1 PFAM: ATP-grasp domain YP_005062475.1 PFAM: Acetyltransferase (GNAT) family YP_005062476.1 PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain YP_005062477.1 PFAM: Bacterial sugar transferase YP_005062478.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family YP_005062479.1 PFAM: Helix-turn-helix YP_005062481.1 PFAM: Polysaccharide biosynthesis protein YP_005062482.1 PFAM: Transcription termination factor nusG YP_005062483.1 PFAM: Shikimate dehydrogenase substrate binding domain; Shikimate / quinate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase YP_005062484.1 PFAM: Transglutaminase-like superfamily YP_005062485.1 PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); TIGRFAM: Listeria/Bacterioides repeat YP_005062487.1 PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); TIGRFAM: Listeria/Bacterioides repeat YP_005062492.1 PFAM: Cupin domain YP_005062494.1 PFAM: Archaeal ATPase; Archaea bacterial proteins of unknown function YP_005062495.1 PFAM: Nitroreductase family YP_005062496.1 PFAM: Glycosyl hydrolases family 31 YP_005062497.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005062498.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005062499.1 PFAM: Bacterial extracellular solute-binding protein YP_005062500.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_005062502.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain YP_005062503.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain YP_005062504.1 PFAM: Bacterial extracellular solute-binding protein YP_005062505.1 PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain YP_005062506.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005062507.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005062510.1 PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein YP_005062511.1 PFAM: NMT1/THI5 like; TIGRFAM: TRAP transporter solute receptor, TAXI family YP_005062512.1 PFAM: Domain of unknown function (DUF296) YP_005062513.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YP_005062514.1 PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase YP_005062515.1 PFAM: Serine dehydratase alpha chain YP_005062516.1 PFAM: Cyclic nucleotide-binding domain YP_005062517.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase YP_005062518.1 PFAM: C4-dicarboxylate anaerobic carrier YP_005062519.1 PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YP_005062520.1 PFAM: Nitroreductase family YP_005062521.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_005062522.1 PFAM: SAF domain; D-galactarate dehydratase / Altronate hydrolase, C terminus; TIGRFAM: galactarate dehydratase YP_005062523.1 PFAM: Tripartite tricarboxylate transporter TctA family YP_005062525.1 PFAM: Tripartite tricarboxylate transporter family receptor YP_005062526.1 PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase YP_005062527.1 PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; TIGRFAM: glucarate dehydratase YP_005062528.1 PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; 2-hydroxy-3-oxopropionate reductase YP_005062529.1 PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator YP_005062531.1 PFAM: Helix-turn-helix YP_005062532.1 PFAM: HipA-like C-terminal domain; HipA-like N-terminal domain; TIGRFAM: HipA N-terminal domain YP_005062534.1 PFAM: Serine dehydratase alpha chain YP_005062535.1 PFAM: DAK2 domain; Dak1 domain; TIGRFAM: dihydroxyacetone kinase, DhaK subunit YP_005062537.1 PFAM: ABC transporter YP_005062538.1 PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter YP_005062539.1 PFAM: Branched-chain amino acid transport system / permease component YP_005062540.1 PFAM: Branched-chain amino acid transport system / permease component YP_005062541.1 PFAM: Receptor family ligand binding region YP_005062542.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_005062543.1 PFAM: Serine dehydratase alpha chain YP_005062544.1 PFAM: DAK2 domain YP_005062545.1 PFAM: Dak1 domain YP_005062546.1 PFAM: ABC transporter YP_005062547.1 PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter YP_005062548.1 PFAM: Branched-chain amino acid transport system / permease component YP_005062549.1 PFAM: Branched-chain amino acid transport system / permease component YP_005062550.1 PFAM: Receptor family ligand binding region YP_005062552.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_005062553.1 PFAM: pfkB family carbohydrate kinase; TIGRFAM: ribokinase YP_005062554.1 PFAM: ROK family YP_005062555.1 PFAM: SIS domain YP_005062556.1 PFAM: ABC transporter YP_005062557.1 PFAM: Branched-chain amino acid transport system / permease component YP_005062558.1 PFAM: family YP_005062559.1 PFAM: ROK family YP_005062560.1 TIGRFAM: KamA family protein YP_005062561.1 PFAM: Uncharacterized conserved protein (DUF2156) YP_005062565.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_005062566.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: putative selenium metabolism hydrolase YP_005062567.1 PFAM: Sodium:alanine symporter family; TIGRFAM: amino acid carrier protein YP_005062568.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family YP_005062569.1 PFAM: Bacterial extracellular solute-binding protein YP_005062570.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005062571.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005062572.1 PFAM: MarR family YP_005062573.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family YP_005062574.1 PFAM: Ketopantoate reductase PanE/ApbA; TIGRFAM: 2-dehydropantoate 2-reductase YP_005062577.1 PFAM: tRNA (Uracil-5-)-methyltransferase; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumA; manually curated YP_005062578.1 PFAM: Domain of unknown function (DUF2437); Fumarylacetoacetate (FAA) hydrolase family YP_005062579.1 PFAM: Protein of unknown function (DUF523) YP_005062581.1 PFAM: Branched-chain amino acid transport system / permease component YP_005062582.1 PFAM: Branched-chain amino acid transport system / permease component YP_005062583.1 PFAM: ABC transporter YP_005062584.1 PFAM: Basic membrane protein YP_005062585.1 PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; TIGRFAM: xanthine dehydrogenase, molybdopterin binding subunit YP_005062586.1 PFAM: FAD binding domain in molybdopterin dehydrogenase; [2Fe-2S] binding domain; CO dehydrogenase flavoprotein C-terminal domain; TIGRFAM: xanthine dehydrogenase, small subunit YP_005062587.1 PFAM: Bacterial regulatory proteins, gntR family; UTRA domain YP_005062591.1 PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing) YP_005062592.1 PFAM: Aminotransferase class-III; TIGRFAM: acetylornithine and succinylornithine aminotransferases YP_005062593.1 PFAM: Amino acid kinase family; TIGRFAM: acetylglutamate kinase YP_005062594.1 PFAM: ArgJ family; TIGRFAM: glutamate N-acetyltransferase/amino-acid acetyltransferase YP_005062595.1 PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, common form YP_005062596.1 PFAM: FR47-like protein YP_005062598.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain YP_005062599.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family YP_005062600.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain YP_005062601.1 PFAM: Xylose isomerase-like TIM barrel YP_005062602.1 PFAM: Heparinase II/III-like protein YP_005062603.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold YP_005062604.1 PFAM: Dihydroorotate dehydrogenase; 4Fe-4S binding domain YP_005062605.1 PFAM: Xylose isomerase-like TIM barrel YP_005062606.1 PFAM: Malate/L-lactate dehydrogenase YP_005062607.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005062608.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005062609.1 PFAM: Bacterial extracellular solute-binding protein YP_005062610.1 PFAM: Glycosyl hydrolases family 43 YP_005062611.1 PFAM: 5TMR of 5TMR-LYT; HD domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_005062612.1 PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_005062613.1 PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase type III N terminal YP_005062614.1 PFAM: Glutamine amidotransferases class-II YP_005062615.1 PFAM: Conserved region in glutamate synthase YP_005062616.1 PFAM: 4Fe-4S binding domain YP_005062617.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_005062618.1 PFAM: GXGXG motif YP_005062619.1 PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I YP_005062620.1 PFAM: ANTAR domain YP_005062621.1 PFAM: Glutamine amidotransferase class-I; CTP synthase N-terminus; TIGRFAM: CTP synthase YP_005062622.1 PFAM: Transcriptional regulator PadR-like family YP_005062626.1 PFAM: Bacterial extracellular solute-binding protein YP_005062627.1 PFAM: Bacterial extracellular solute-binding protein YP_005062628.1 PFAM: ABC transporter; TOBE domain YP_005062629.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005062630.1 PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_005062631.1 PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family YP_005062633.1 PFAM: alpha/beta hydrolase fold YP_005062634.1 PFAM: Bacterial regulatory proteins, lacI family; family; manually curated YP_005062635.1 PFAM: Bacterial extracellular solute-binding protein YP_005062636.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005062637.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005062639.1 PFAM: Endonuclease/Exonuclease/phosphatase family YP_005062640.1 PFAM: GDSL-like Lipase/Acylhydrolase YP_005062641.1 PFAM: Alpha amylase, catalytic domain YP_005062642.1 PFAM: Glycosyl transferases group 1 YP_005062643.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005062644.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005062645.1 PFAM: Bacterial extracellular solute-binding protein YP_005062646.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; DsrE/DsrF-like family; SirA-like protein; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; Rhodanese-like domain YP_005062647.1 PFAM: SlyX YP_005062648.1 PFAM: IclR helix-turn-helix domain YP_005062649.1 PFAM: Rubredoxin YP_005062650.1 PFAM: EAL domain; GGDEF domain; Response regulator receiver domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_005062651.1 PFAM: Acetyltransferase (GNAT) family YP_005062652.1 PFAM: Major Facilitator Superfamily YP_005062653.1 PFAM: Nitroreductase family YP_005062654.1 PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family YP_005062655.1 PFAM: Histidine kinase; HAMP domain; Cache domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_005062656.1 PFAM: family YP_005062657.1 PFAM: Branched-chain amino acid transport system / permease component YP_005062658.1 PFAM: ABC transporter YP_005062659.1 PFAM: family YP_005062660.1 PFAM: Pectinesterase YP_005062661.1 PFAM: domain; Domain of unknown function; Pyruvate ferredoxin/flavodoxin oxidoreductase; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric YP_005062662.1 PFAM: Major Facilitator Superfamily YP_005062663.1 PFAM: Ribonucleotide reductase, all-alpha domain; Ribonucleotide reductase, barrel domain; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent YP_005062665.1 PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain YP_005062666.1 PFAM: Response regulator receiver domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain YP_005062667.1 PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family YP_005062668.1 PFAM: DNA gyrase/topoisomerase IV, subunit A YP_005062669.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus YP_005062670.1 PFAM: YhhN-like protein YP_005062671.1 PFAM: CorA-like Mg2+ transporter protein; TIGRFAM: magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) YP_005062672.1 PFAM: Acetyltransferase (GNAT) family YP_005062673.1 PFAM: Acetyltransferase (GNAT) family YP_005062674.1 PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain YP_005062675.1 PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family YP_005062676.1 PFAM: Glycerophosphoryl diester phosphodiesterase family YP_005062677.1 PFAM: ABC transporter YP_005062678.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family YP_005062679.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family YP_005062680.1 PFAM: Bacterial extracellular solute-binding proteins, family 3 YP_005062681.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_005062683.1 PFAM: Serine dehydratase alpha chain; Serine dehydratase beta chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, single chain form YP_005062686.1 PFAM: Prephenate dehydratase; ACT domain; DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase YP_005062687.1 PFAM: HhH-GPD superfamily base excision DNA repair protein; TIGRFAM: endonuclease III YP_005062689.1 PFAM: Methylenetetrahydrofolate reductase YP_005062690.1 PFAM: Pterin binding enzyme; Vitamin B12 dependent methionine synthase, activation domain; B12 binding domain; Homocysteine S-methyltransferase; TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase YP_005062691.1 PFAM: ApbE family YP_005062692.1 PFAM: NIL domain YP_005062693.1 PFAM: Domain of unknown function DUF39 YP_005062695.1 PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase YP_005062696.1 PFAM: Alpha amylase, catalytic domain YP_005062697.1 PFAM: Sodium:dicarboxylate symporter family YP_005062699.1 PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein YP_005062700.1 PFAM: NMT1/THI5 like; TIGRFAM: TRAP transporter solute receptor, TAXI family YP_005062701.1 PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase YP_005062702.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_005062703.1 PFAM: Inosine-uridine preferring nucleoside hydrolase YP_005062704.1 PFAM: Cyclic nucleotide-binding domain YP_005062705.1 PFAM: Metalloenzyme superfamily; BPG-independent PGAM N-terminus (iPGM_N); TIGRFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase YP_005062706.1 PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain YP_005062707.1 PFAM: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase YP_005062708.1 PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc) YP_005062709.1 PFAM: RNA methyltransferase; TIGRFAM: RNA methyltransferase, RsmE family YP_005062710.1 PFAM: Sigma-54 interaction domain; manually curated YP_005062711.1 PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_005062712.1 PFAM: pfkB family carbohydrate kinase YP_005062713.1 PFAM: Major Facilitator Superfamily YP_005062714.1 PFAM: Bacterial regulatory protein, arsR family YP_005062715.1 PFAM: S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, N-terminal domain; TIGRFAM: S-adenosylmethionine synthetase YP_005062716.1 PFAM: Radical SAM superfamily; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein YP_005062717.1 PFAM: ATP cone domain; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase YP_005062718.1 PFAM: R3H domain YP_005062719.1 PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain; membrane protein insertase, YidC/Oxa1 family, N-terminal domain YP_005062720.1 PFAM: Ribonuclease P; TIGRFAM: ribonuclease P protein component, eubacterial; manually curated YP_005062721.1 PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type YP_005062722.1 PFAM: Protein of unknown function (DUF721) YP_005062723.1 PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: recF protein YP_005062724.1 PFAM: DNA polymerase III beta subunit, C-terminal domain; DNA polymerase III beta subunit, N-terminal domain; DNA polymerase III beta subunit, central domain; TIGRFAM: DNA polymerase III, beta subunit YP_005062725.1 PFAM: domain; Bacterial dnaA protein; TIGRFAM: chromosomal replication initiator protein DnaA YP_005062726.1 PFAM: Toprim domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA gyrase, B subunit YP_005062727.1 PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller; TIGRFAM: DNA gyrase, A subunit YP_005062728.1 PFAM: NifU-like domain YP_005062729.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_005062730.1 PFAM: ParB-like nuclease domain; Helix-turn-helix; TIGRFAM: ParB-like partition proteins YP_005062731.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD YP_005062732.1 PFAM: KaiC; TIGRFAM: DNA repair protein RadA YP_005062733.1 PFAM: TraB family; TIGRFAM: pheromone shutdown-related protein TraB YP_005062734.1 PFAM: Membrane protein of unknown function (DUF340) YP_005062736.1 PFAM: Protein of unknown function DUF45 YP_005062737.1 PFAM: Metallo-beta-lactamase superfamily YP_005062738.1 PFAM: Peptidase C26 YP_005062739.1 PFAM: Peptidase family M20/M25/M40; TIGRFAM: aminoacyl-histidine dipeptidase YP_005062740.1 PFAM: Amidohydrolase family; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase YP_005062741.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family YP_005062742.1 PFAM: Domain of unknown function (DUF3362); Radical SAM superfamily; Radical SAM N-terminal; TIGRFAM: uncharacterized radical SAM protein YgiQ; manually curated YP_005062743.1 PFAM: Diacylglycerol kinase catalytic domain; TIGRFAM: lipid kinase, YegS/Rv2252/BmrU family YP_005062744.1 PFAM: Trehalase YP_005062745.1 PFAM: DnaJ domain; Tellurite resistance protein TerB YP_005062746.1 PFAM: Toprim domain; RecR protein; TIGRFAM: recombination protein RecR YP_005062747.1 PFAM: Uncharacterised BCR, YbaB family COG0718; TIGRFAM: DNA-binding protein, YbaB/EbfC family YP_005062748.1 PFAM: ATPase family associated with various cellular activities (AAA); DNA polymerase III subunits gamma and tau domain III; TIGRFAM: DNA polymerase III, delta' subunit; DNA polymerase III, subunit gamma and tau YP_005062749.1 PFAM: Peptidase family M28 YP_005062750.1 PFAM: Uncharacterized protein family UPF0029; TIGRFAM: uncharacterized protein, YigZ family YP_005062751.1 PFAM: Aldo/keto reductase family YP_005062752.1 PFAM: NUDIX domain YP_005062753.1 PFAM: DeoC/LacD family aldolase; TIGRFAM: deoxyribose-phosphate aldolase YP_005062754.1 PFAM: Thymidine kinase YP_005062755.1 PFAM: Xylose isomerase-like TIM barrel YP_005062756.1 PFAM: Glycosyl hydrolases family 28 YP_005062759.1 PFAM: Alkaline phosphatase YP_005062760.1 PFAM: YibE/F-like protein YP_005062761.1 PFAM: ABC transporter; TOBE domain YP_005062762.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005062763.1 PFAM: Bacterial extracellular solute-binding protein YP_005062764.1 PFAM: Acetyltransferase (GNAT) family YP_005062765.1 PFAM: KDPG and KHG aldolase; TIGRFAM: Entner-Doudoroff aldolase YP_005062766.1 PFAM: pfkB family carbohydrate kinase YP_005062768.1 PFAM: Uncharacterized protein domain (DUF2202) YP_005062771.1 PFAM: Cupin domain YP_005062772.1 PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold YP_005062773.1 PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator YP_005062774.1 PFAM: Glucuronate isomerase YP_005062775.1 PFAM: SAF domain; D-galactarate dehydratase / Altronate hydrolase, C terminus YP_005062776.1 PFAM: Mannitol dehydrogenase Rossmann domain YP_005062777.1 PFAM: Sodium Bile acid symporter family YP_005062778.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family YP_005062779.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005062780.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005062781.1 PFAM: Bacterial extracellular solute-binding protein YP_005062782.1 PFAM: Glycosyl Hydrolase Family 88 YP_005062783.1 PFAM: Basic membrane protein YP_005062784.1 PFAM: ABC transporter YP_005062785.1 PFAM: Branched-chain amino acid transport system / permease component YP_005062786.1 PFAM: Branched-chain amino acid transport system / permease component YP_005062787.1 PFAM: Phosphorylase superfamily; TIGRFAM: purine nucleoside phosphorylase I, inosine and guanosine-specific; inosine guanosine and xanthosine phosphorylase family YP_005062788.1 PFAM: Cupin superfamily (DUF985) YP_005062789.1 PFAM: short chain dehydrogenase YP_005062792.1 PFAM: NADPH-dependent FMN reductase YP_005062793.1 PFAM: ABC transporter YP_005062794.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_005062795.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_005062799.1 PFAM: ROK family YP_005062800.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hsp90 protein YP_005062801.1 PFAM: Mechanosensitive ion channel YP_005062803.1 PFAM: Sigma-54 interaction domain; Propionate catabolism activator YP_005062804.1 PFAM: Pyridoxal phosphate biosynthetic protein PdxA; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase YP_005062805.1 PFAM: Tripartite tricarboxylate transporter TctB family YP_005062806.1 PFAM: Tripartite tricarboxylate transporter TctA family YP_005062807.1 PFAM: Tripartite tricarboxylate transporter family receptor YP_005062808.1 PFAM: Asp/Glu/Hydantoin racemase YP_005062809.1 PFAM: Xylose isomerase-like TIM barrel YP_005062810.1 PFAM: Aldo/keto reductase family YP_005062811.1 PFAM: Domain of unknown function (DUF362) YP_005062812.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_005062813.1 PFAM: Transketolase, thiamine diphosphate binding domain YP_005062814.1 PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain YP_005062815.1 PFAM: AP endonuclease family 2 C terminus; Xylose isomerase-like TIM barrel YP_005062816.1 PFAM: Periplasmic solute binding protein family YP_005062817.1 PFAM: ABC 3 transport family YP_005062818.1 PFAM: ABC transporter; Domain of unknown function (DUF1893) YP_005062820.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_005062821.1 PFAM: Metallo-beta-lactamase superfamily YP_005062822.1 PFAM: GntP family permease; TIGRFAM: gluconate transporter YP_005062824.1 PFAM: FtsJ-like methyltransferase; TIGRFAM: cell division protein FtsJ YP_005062825.1 PFAM: Rhomboid family YP_005062826.1 PFAM: Adenosine/AMP deaminase; TIGRFAM: adenosine deaminase YP_005062827.1 PFAM: Ankyrin repeat YP_005062828.1 PFAM: YbaK / prolyl-tRNA synthetases associated domain; Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: prolyl-tRNA synthetase, family II YP_005062829.1 PFAM: Class II Aldolase and Adducin N-terminal domain YP_005062830.1 PFAM: Transketolase, thiamine diphosphate binding domain YP_005062831.1 PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain YP_005062834.1 PFAM: OsmC-like protein YP_005062835.1 PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter YP_005062836.1 PFAM: GAD domain; tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: aspartyl-tRNA synthetase, bacterial type YP_005062837.1 PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; MGS-like domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit YP_005062838.1 PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit YP_005062839.1 PFAM: PspC domain YP_005062841.1 PFAM: PspA/IM30 family; TIGRFAM: phage shock protein A YP_005062842.1 PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; TIGRFAM: psp operon transcriptional activator PspF YP_005062843.1 PFAM: PspC domain YP_005062844.1 PFAM: PspA/IM30 family; TIGRFAM: phage shock protein A YP_005062846.1 PFAM: PspC domain YP_005062848.1 PFAM: PspA/IM30 family; TIGRFAM: phage shock protein A YP_005062849.1 PFAM: PspC domain YP_005062850.1 PFAM: PspA/IM30 family; TIGRFAM: phage shock protein A YP_005062851.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: probable S-adenosylmethionine-dependent methyltransferase, YraL family YP_005062852.1 PFAM: SpoU rRNA Methylase family YP_005062853.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family YP_005062854.1 PFAM: Lon protease (S16) C-terminal proteolytic domain YP_005062855.1 PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: dinuclear metal center protein, YbgI/SA1388 family YP_005062856.1 PFAM: Signal peptidase (SPase) II; TIGRFAM: lipoprotein signal peptidase YP_005062859.1 PFAM: Acyl-ACP thioesterase YP_005062860.1 PFAM: Conserved hypothetical protein 95; TIGRFAM: RNA methyltransferase, RsmD family YP_005062861.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecG YP_005062862.1 PFAM: YGGT family YP_005062863.1 PFAM: PHP domain; Bacterial DNA polymerase III alpha subunit; TIGRFAM: DNA-directed DNA polymerase III (polc) YP_005062864.1 PFAM: FAD binding domain in molybdopterin dehydrogenase YP_005062865.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain YP_005062866.1 PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase YP_005062867.1 PFAM: NAD-dependent DNA ligase OB-fold domain; NAD-dependent DNA ligase adenylation domain; NAD-dependent DNA ligase C4 zinc finger domain; BRCA1 C Terminus (BRCT) domain; TIGRFAM: DNA ligase, NAD-dependent YP_005062868.1 PFAM: Aminotransferase class I and II YP_005062869.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; TIGRFAM: ModE molybdate transport repressor domain YP_005062870.1 PFAM: Phosphofructokinase YP_005062871.1 PFAM: Phosphoglucose isomerase YP_005062872.1 PFAM: Arginine repressor, C-terminal domain; Arginine repressor, DNA binding domain; TIGRFAM: arginine repressor YP_005062873.1 PFAM: LemA family YP_005062874.1 PFAM: Predicted membrane protein (DUF2207) YP_005062875.1 PFAM: Protein of unknown function (DUF1653) YP_005062876.1 PFAM: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) YP_005062877.1 PFAM: Cytidylyltransferase family YP_005062878.1 PFAM: Integral membrane protein DUF92; TIGRFAM: TIGR00297 family protein YP_005062879.1 PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL YP_005062880.1 PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit YP_005062881.1 PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family YP_005062882.1 PFAM: Protein export membrane protein; TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF YP_005062883.1 PFAM: LytB protein; TIGRFAM: (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) YP_005062884.1 PFAM: CoA binding domain; Putative DNA-binding protein N-terminus YP_005062885.1 PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit YP_005062886.1 PFAM: Iron only hydrogenase large subunit, C-terminal domain; Putative Fe-S cluster YP_005062887.1 PFAM: Stage II sporulation protein E (SpoIIE) YP_005062889.1 PFAM: Iron only hydrogenase large subunit, C-terminal domain; 4Fe-4S binding domain YP_005062890.1 PFAM: GAF domain YP_005062891.1 PFAM: Anticodon binding domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: threonyl-tRNA synthetase YP_005062892.1 PFAM: Carboxypeptidase Taq (M32) metallopeptidase YP_005062893.1 PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_005062894.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB YP_005062895.1 PFAM: ABC transporter; NIL domain YP_005062896.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005062897.1 PFAM: NLPA lipoprotein; TIGRFAM: lipoprotein, YaeC family YP_005062898.1 PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: ornithine carbamoyltransferase YP_005062899.1 PFAM: Hsp20/alpha crystallin family YP_005062900.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain YP_005062901.1 PFAM: Bacterial regulatory proteins, tetR family YP_005062902.1 PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB YP_005062904.1 PFAM: Protein of unknown function (DUF554) YP_005062905.1 PFAM: Helix-turn-helix YP_005062906.1 PFAM: Carbohydrate phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylases YP_005062907.1 PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type YP_005062908.1 PFAM: SecE/Sec61-gamma subunits of protein translocation complex; TIGRFAM: preprotein translocase, SecE subunit, bacterial YP_005062909.1 PFAM: Transcription termination factor nusG; KOW motif; TIGRFAM: transcription termination/antitermination factor NusG YP_005062910.1 PFAM: Ribosomal protein L11, RNA binding domain; Ribosomal protein L11, N-terminal domain; TIGRFAM: 50S ribosomal protein L11 YP_005062911.1 PFAM: Ribosomal protein L1p/L10e family; TIGRFAM: ribosomal protein L1, bacterial/chloroplast YP_005062912.1 PFAM: Ribosomal protein L10 YP_005062913.1 PFAM: Ribosomal protein L7/L12 C-terminal domain; TIGRFAM: ribosomal protein L7/L12 YP_005062914.1 PFAM: RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 6; RNA polymerase beta subunit external 1 domain; RNA polymerase Rpb2, domain 2; RNA polymerase beta subunit; RNA polymerase Rpb2, domain 7; TIGRFAM: DNA-directed RNA polymerase, beta subunit YP_005062915.1 PFAM: RNA polymerase Rpb1, domain 2; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 5; TIGRFAM: DNA-directed RNA polymerase, beta' subunit, predominant form YP_005062916.1 PFAM: Ribosomal protein S12; TIGRFAM: ribosomal protein S12, bacterial/organelle YP_005062917.1 PFAM: Ribosomal protein S7p/S5e; TIGRFAM: ribosomal protein S7, bacterial/organelle YP_005062918.1 PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU YP_005062919.1 PFAM: Ribosomal protein S10p/S20e; TIGRFAM: ribosomal protein S10, bacterial/organelle YP_005062920.1 PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial YP_005062921.1 PFAM: Ribosomal protein L4/L1 family; TIGRFAM: 50S ribosomal protein L4, bacterial/organelle YP_005062922.1 PFAM: Ribosomal protein L23 YP_005062923.1 PFAM: Ribosomal Proteins L2, RNA binding domain; Ribosomal Proteins L2, C-terminal domain; TIGRFAM: ribosomal protein L2, bacterial/organellar YP_005062924.1 PFAM: Ribosomal protein S19; TIGRFAM: ribosomal protein S19, bacterial/organelle YP_005062925.1 PFAM: Ribosomal protein L22p/L17e; TIGRFAM: ribosomal protein L22, bacterial type YP_005062926.1 PFAM: KH domain; Ribosomal protein S3, C-terminal domain; Ribosomal protein S3, N-terminal domain; TIGRFAM: ribosomal protein S3, bacterial type YP_005062927.1 PFAM: Ribosomal protein L16p/L10e; TIGRFAM: ribosomal protein L16, bacterial/organelle YP_005062928.1 PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29 YP_005062929.1 PFAM: Ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17 YP_005062930.1 PFAM: Ribosomal protein L14p/L23e; TIGRFAM: ribosomal protein L14, bacterial/organelle YP_005062931.1 PFAM: KOW motif; TIGRFAM: ribosomal protein L24, bacterial/organelle YP_005062932.1 PFAM: ribosomal L5P family C-terminus; Ribosomal protein L5 YP_005062933.1 PFAM: Ribosomal protein S14p/S29e YP_005062934.1 PFAM: Ribosomal protein S8 YP_005062935.1 PFAM: Ribosomal protein L6; TIGRFAM: ribosomal protein L6, bacterial type YP_005062936.1 PFAM: Ribosomal L18p/L5e family; TIGRFAM: ribosomal protein L18, bacterial type YP_005062937.1 PFAM: Ribosomal protein S5, N-terminal domain; Ribosomal protein S5, C-terminal domain; TIGRFAM: ribosomal protein S5, bacterial/organelle type YP_005062938.1 PFAM: Ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle YP_005062939.1 PFAM: Ribosomal protein L18e/L15; TIGRFAM: ribosomal protein L15, bacterial/organelle YP_005062940.1 PFAM: eubacterial secY protein; TIGRFAM: preprotein translocase, SecY subunit YP_005062941.1 PFAM: Ribosomal protein L36; TIGRFAM: ribosomal protein L36, bacterial type YP_005062942.1 PFAM: Ribosomal protein S13/S18; TIGRFAM: 30S ribosomal protein S13 YP_005062943.1 PFAM: Ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11 YP_005062944.1 PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type YP_005062945.1 PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type YP_005062946.1 PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17 YP_005062947.1 PFAM: KH domain; HD domain; Domain of unknown function (DUF3552); TIGRFAM: conserved hypothetical protein YmdA/YtgF; uncharacterized domain HDIG YP_005062948.1 TIGRFAM: metallophosphoesterase, MG_246/BB_0505 family; manually curated YP_005062949.1 PFAM: FtsJ-like methyltransferase; TIGRFAM: hemolysin TlyA family protein YP_005062950.1 PFAM: Sporulation and spore germination YP_005062951.1 PFAM: PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, N-terminal; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase YP_005062952.1 PFAM: GTPase of unknown function; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein domain YP_005062953.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E YP_005062955.1 PFAM: GrpE YP_005062956.1 PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK YP_005062957.1 PFAM: DnaJ C terminal region; DnaJ domain; DnaJ central domain (4 repeats); TIGRFAM: chaperone protein DnaJ YP_005062958.1 PFAM: SpoU rRNA Methylase family; TIGRFAM: rRNA methylase, putative, group 3 YP_005062960.1 PFAM: ABC transporter YP_005062961.1 PFAM: Branched-chain amino acid transport system / permease component YP_005062962.1 PFAM: Branched-chain amino acid transport system / permease component YP_005062966.1 PFAM: 3-carboxy-cis,cis-muconate lactonizing enzyme YP_005062967.1 PFAM: DsrE/DsrF-like family YP_005062968.1 PFAM: Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C domain; TIGRFAM: phosphoribosylamine--glycine ligase YP_005062969.1 PFAM: Dihydrouridine synthase (Dus); TIGRFAM: putative TIM-barrel protein, nifR3 family YP_005062970.1 PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family YP_005062971.1 PFAM: PSP1 C-terminal conserved region YP_005062972.1 PFAM: Ribosomal protein S20; TIGRFAM: ribosomal protein S20 YP_005062973.1 PFAM: Bacterial DNA-binding protein YP_005062974.1 PFAM: Carbon-nitrogen hydrolase; TIGRFAM: apolipoprotein N-acyltransferase YP_005062975.1 PFAM: Probable molybdopterin binding domain; Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA N-terminal domain; competence/damage-inducible protein CinA C-terminal domain; molybdenum cofactor synthesis domain YP_005062976.1 PFAM: Rho termination factor, RNA-binding domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: transcription termination factor Rho YP_005062977.1 PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31 YP_005062979.1 PFAM: Survival protein SurE; TIGRFAM: 5'/3'-nucleotidase SurE YP_005062981.1 PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase NifS YP_005062982.1 PFAM: NifU-like N terminal domain; BFD-like [2Fe-2S] binding domain YP_005062984.1 PFAM: Bacterial regulatory proteins, luxR family YP_005062985.1 PFAM: alpha/beta hydrolase fold YP_005062986.1 PFAM: Phosphoribulokinase / Uridine kinase family YP_005062987.1 PFAM: Aldehyde ferredoxin oxidoreductase, N-terminal domain; Aldehyde ferredoxin oxidoreductase, domains 2 & 3 YP_005062988.1 TIGRFAM: phosphoesterase, MJ0936 family YP_005062989.1 PFAM: Bacterial transcription activator, effector binding domain YP_005062991.1 PFAM: Putative lysophospholipase YP_005062992.1 PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN) YP_005062993.1 PFAM: ZIP Zinc transporter YP_005062995.1 PFAM: Rieske [2Fe-2S] domain YP_005062996.1 PFAM: S-adenosyl-l-methionine hydroxide adenosyltransferase YP_005062997.1 PFAM: Cyclic nucleotide-binding domain YP_005063001.1 PFAM: Predicted permease YP_005063002.1 PFAM: Predicted permease YP_005063003.1 PFAM: ABC transporter YP_005063004.1 PFAM: SPFH domain / Band 7 family YP_005063005.1 PFAM: Bacterial regulatory proteins, gntR family YP_005063006.1 PFAM: Predicted permease YP_005063007.1 PFAM: Pirin C-terminal cupin domain; Pirin YP_005063008.1 PFAM: Ferritin-like domain YP_005063009.1 PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family YP_005063010.1 PFAM: TrkA-N domain; TrkA-C domain YP_005063011.1 PFAM: Bacterial transferase hexapeptide (three repeats) YP_005063012.1 PFAM: Permease family; TIGRFAM: uracil-xanthine permease; xanthine permease YP_005063013.1 PFAM: Periplasmic solute binding protein family YP_005063014.1 PFAM: ABC transporter YP_005063015.1 PFAM: ABC 3 transport family YP_005063016.1 PFAM: Ferric uptake regulator family YP_005063017.1 PFAM: Phosphoenolpyruvate carboxykinase YP_005063018.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family YP_005063019.1 PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family YP_005063020.1 PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family YP_005063021.1 PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family YP_005063022.1 PFAM: EAL domain YP_005063023.1 PFAM: Bacterial regulatory proteins, luxR family YP_005063025.1 PFAM: Protein of unknown function (DUF1329) YP_005063026.1 PFAM: MMPL family YP_005063027.1 PFAM: Alpha amylase, catalytic domain YP_005063028.1 PFAM: Bacterial regulatory proteins, tetR family YP_005063029.1 PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase YP_005063030.1 PFAM: Nucleotidyl transferase YP_005063031.1 PFAM: O-Antigen ligase YP_005063032.1 PFAM: Polysaccharide biosynthesis protein YP_005063033.1 PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family YP_005063034.1 PFAM: Stage II sporulation protein E (SpoIIE); TIGRFAM: PAS domain S-box YP_005063035.1 PFAM: Glycosyl transferases group 1 YP_005063038.1 PFAM: Glycosyl hydrolase family 9; N-terminal ig-like domain of cellulase YP_005063039.1 PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor YP_005063040.1 PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase YP_005063041.1 PFAM: Glycosyl transferase family 2 YP_005063044.1 PFAM: Glycosyl transferase WecB/TagA/CpsF family; TIGRFAM: bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family YP_005063045.1 PFAM: Bacterial sugar transferase YP_005063046.1 PFAM: Glycosyl transferases group 1 YP_005063047.1 PFAM: Glycosyl transferases group 1 YP_005063048.1 PFAM: Glycosyl transferases group 1 YP_005063049.1 PFAM: GGDEF domain; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_005063053.1 PFAM: Fructose-bisphosphate aldolase class-I YP_005063054.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_005063055.1 PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family YP_005063056.1 PFAM: Creatinine amidohydrolase YP_005063057.1 PFAM: Major Facilitator Superfamily YP_005063059.1 PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain; Beta galactosidase small chain YP_005063060.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005063061.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005063062.1 PFAM: Bacterial extracellular solute-binding protein YP_005063063.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_005063064.1 PFAM: Predicted histidine kinase sensor domain; Bacterial regulatory helix-turn-helix proteins, AraC family YP_005063065.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; Predicted histidine kinase sensor domain YP_005063067.1 PFAM: Bacterial extracellular solute-binding protein YP_005063068.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005063069.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005063070.1 PFAM: FAD binding domain YP_005063071.1 PFAM: Nitroreductase family YP_005063072.1 PFAM: Sodium/hydrogen exchanger family YP_005063073.1 PFAM: Putative esterase YP_005063074.1 PFAM: Homoserine O-succinyltransferase; TIGRFAM: homoserine O-succinyltransferase YP_005063075.1 PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: OAH/OAS sulfhydrylase YP_005063076.1 PFAM: Transcriptional regulator PadR-like family YP_005063077.1 PFAM: Acetyltransferase (GNAT) family YP_005063078.1 PFAM: Major Facilitator Superfamily YP_005063079.1 PFAM: Helicase conserved C-terminal domain; RQC domain; HRDC domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family YP_005063080.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family; manually curated YP_005063081.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YP_005063083.1 PFAM: YheO-like PAS domain YP_005063084.1 PFAM: NADH:flavin oxidoreductase / NADH oxidase family YP_005063085.1 PFAM: Bacterial regulatory proteins, tetR family YP_005063086.1 PFAM: Outer membrane efflux protein YP_005063087.1 PFAM: Biotin-requiring enzyme; TIGRFAM: RND family efflux transporter, MFP subunit YP_005063088.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family YP_005063090.1 PFAM: Peptidase family M23 YP_005063091.1 PFAM: Phosphoglycerate mutase family; TIGRFAM: phosphoglycerate mutase, BPG-dependent, family 1 YP_005063092.1 PFAM: RNB domain; TIGRFAM: VacB and RNase II family 3'-5' exoribonucleases YP_005063094.1 PFAM: Sodium/hydrogen exchanger family YP_005063095.1 PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YP_005063097.1 PFAM: FAD binding domain of DNA photolyase; DNA photolyase; TIGRFAM: photolyase PhrII YP_005063098.1 PFAM: Protein of unknown function (DUF1538) YP_005063100.1 PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) YP_005063101.1 PFAM: Flavodoxin-like fold YP_005063102.1 PFAM: NUDIX domain YP_005063103.1 PFAM: Polysaccharide deacetylase YP_005063104.1 PFAM: Collagenase; Peptidase family U32 YP_005063105.1 TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter YP_005063106.1 PFAM: Cyclic nucleotide-binding domain YP_005063107.1 PFAM: Phosphoenolpyruvate carboxykinase YP_005063111.1 PFAM: Permease family; TIGRFAM: uracil-xanthine permease YP_005063112.1 PFAM: Methyltransferase domain YP_005063113.1 PFAM: 3'-5' exonuclease; HRDC domain YP_005063114.1 PFAM: Ketopantoate reductase PanE/ApbA; Ketopantoate reductase PanE/ApbA C terminal; TIGRFAM: 2-dehydropantoate 2-reductase YP_005063115.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: peptidase T-like protein YP_005063116.1 PFAM: Aldo/keto reductase family YP_005063117.1 PFAM: Domain of unknown function (DU1801) YP_005063118.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_005063119.1 PFAM: Bacterial extracellular solute-binding protein, family 7 YP_005063120.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_005063121.1 PFAM: EamA-like transporter family; TIGRFAM: rarD protein YP_005063122.1 PFAM: isoform II YP_005063124.1 PFAM: Cyclic nucleotide-binding domain YP_005063125.1 PFAM: Putative sugar diacid recognition YP_005063126.1 PFAM: Iron-containing alcohol dehydrogenase YP_005063127.1 PFAM: OsmC-like protein; TIGRFAM: peroxiredoxin, SACOL1771 subfamily YP_005063128.1 PFAM: RibD C-terminal domain YP_005063129.1 PFAM: Aldose 1-epimerase YP_005063130.1 PFAM: ABC transporter YP_005063131.1 PFAM: Branched-chain amino acid transport system / permease component YP_005063132.1 PFAM: family YP_005063133.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain YP_005063138.1 PFAM: Exonuclease YP_005063139.1 PFAM: Membrane transport protein YP_005063140.1 PFAM: Protein of unknown function DUF72 YP_005063142.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_005063143.1 PFAM: Bacterial extracellular solute-binding protein YP_005063145.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005063146.1 PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain YP_005063147.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase YP_005063148.1 PFAM: short chain dehydrogenase YP_005063149.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase YP_005063150.1 PFAM: HD domain; Response regulator receiver domain YP_005063152.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Acetyltransferase (GNAT) family; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box YP_005063153.1 PFAM: Rubrerythrin YP_005063155.1 PFAM: Xylose isomerase-like TIM barrel YP_005063156.1 PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: D-xylulose kinase YP_005063158.1 PFAM: Helix-turn-helix YP_005063159.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase YP_005063160.1 PFAM: NMT1/THI5 like; TIGRFAM: TRAP transporter solute receptor, TAXI family YP_005063161.1 PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein YP_005063163.1 PFAM: Metallo-beta-lactamase superfamily YP_005063166.1 PFAM: NUDIX domain YP_005063167.1 PFAM: alpha/beta hydrolase fold YP_005063169.1 PFAM: Putative RNA methylase family UPF0020 YP_005063170.1 PFAM: Bacterial extracellular solute-binding protein, family 7 YP_005063171.1 PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component YP_005063172.1 PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit YP_005063173.1 PFAM: Isochorismatase family YP_005063174.1 PFAM: Metallo-beta-lactamase superfamily YP_005063175.1 PFAM: Uncharacterised protein family (UPF0261) YP_005063176.1 PFAM: Class II Aldolase and Adducin N-terminal domain; TIGRFAM: L-ribulose-5-phosphate 4-epimerase YP_005063177.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_005063179.1 PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_005063181.1 PFAM: MerR family regulatory protein; MerR, DNA binding; Bacterial transcription activator, effector binding domain YP_005063182.1 PFAM: Beta-lactamase YP_005063183.1 PFAM: ABC transporter; TOBE domain YP_005063184.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_005063185.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_005063186.1 PFAM: Bacterial extracellular solute-binding protein YP_005063187.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005063188.1 PFAM: ABC transporter; TOBE domain YP_005063190.1 PFAM: Helix-turn-helix; Domain of unknown function (DUF955); TIGRFAM: addiction module antidote protein, HigA family YP_005063191.1 PFAM: Aldose 1-epimerase; manually curated YP_005063192.1 PFAM: ROK family YP_005063193.1 PFAM: SIS domain; Helix-turn-helix domain, rpiR family YP_005063197.1 PFAM: FAD dependent oxidoreductase YP_005063198.1 PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_005063199.1 PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family YP_005063200.1 PFAM: Bacterial extracellular solute-binding protein YP_005063201.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005063202.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005063204.1 PFAM: Mycoplasma protein of unknown function, DUF285; TIGRFAM: bacterial surface protein 26-residue repeat YP_005063205.1 PFAM: Bacterial regulatory proteins, gntR family YP_005063206.1 PFAM: family YP_005063207.1 PFAM: ABC transporter YP_005063208.1 PFAM: Branched-chain amino acid transport system / permease component YP_005063209.1 PFAM: short chain dehydrogenase YP_005063210.1 PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast YP_005063211.1 PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: L-ribulokinase YP_005063212.1 PFAM: Uncharacterized conserved protein (DUF2174) YP_005063214.1 PFAM: MerR family regulatory protein; Bacterial transcription activator, effector binding domain YP_005063216.1 PFAM: Amidohydrolase family; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; manually curated YP_005063217.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family YP_005063220.1 PFAM: Calcineurin-like phosphoesterase YP_005063223.1 PFAM: Integrase core domain YP_005063224.1 PFAM: IstB-like ATP binding protein YP_005063225.1 PFAM: Integrase core domain YP_005063226.1 PFAM: Integrase core domain YP_005063230.1 PFAM: ParB-like nuclease domain YP_005063232.1 PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain YP_005063233.1 PFAM: ParB-like nuclease domain YP_005063238.1 PFAM: Rare lipoprotein A (RlpA)-like double-psi beta-barrel; TIGRFAM: rare lipoprotein A YP_005063239.1 PFAM: tRNA synthetases class I (K); TIGRFAM: lysyl-tRNA synthetase, archaeal and spirochete YP_005063240.1 PFAM: NADPH-dependent FMN reductase YP_005063241.1 PFAM: GTPase of unknown function; KH domain; TIGRFAM: GTP-binding protein Era; small GTP-binding protein domain YP_005063242.1 PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP YP_005063243.1 PFAM: Major Facilitator Superfamily YP_005063244.1 PFAM: Endonuclease/Exonuclease/phosphatase family YP_005063245.1 PFAM: CoA binding domain; Putative DNA-binding protein N-terminus YP_005063246.1 PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit YP_005063247.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_005063249.1 PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; 4Fe-4S binding domain; Respiratory-chain NADH dehydrogenase 24 Kd subunit; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain YP_005063250.1 PFAM: Iron only hydrogenase large subunit, C-terminal domain; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Iron hydrogenase small subunit; TIGRFAM: hydrogenase, Fe-only YP_005063251.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_005063253.1 PFAM: Glucose-6-phosphate dehydrogenase, NAD binding domain; Glucose-6-phosphate dehydrogenase, C-terminal domain; TIGRFAM: glucose-6-phosphate 1-dehydrogenase YP_005063255.1 PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; TIGRFAM: PTS system, fructose subfamily, IIA component YP_005063260.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: peptidase T YP_005063263.1 PFAM: Glycerophosphoryl diester phosphodiesterase family YP_005063264.1 PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: apurinic endonuclease (APN1) YP_005063265.1 PFAM: Peptidase M16C associated; Peptidase M16 inactive domain; Insulinase (Peptidase family M16) YP_005063266.1 PFAM: Iron only hydrogenase large subunit, C-terminal domain; Putative Fe-S cluster; 4Fe-4S binding domain YP_005063267.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_005063268.1 PFAM: DRTGG domain YP_005063269.1 PFAM: Patatin-like phospholipase YP_005063270.1 PFAM: Ankyrin repeat YP_005063271.1 PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: glycerol kinase YP_005063272.1 PFAM: DisA bacterial checkpoint controller nucleotide-binding; TIGRFAM: TIGR00159 family protein YP_005063274.1 PFAM: 4'-phosphopantetheinyl transferase superfamily; TIGRFAM: phosphopantethiene--protein transferase domain; holo-[acyl-carrier-protein] synthase YP_005063275.1 PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I YP_005063276.1 PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase, family 4 YP_005063277.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: primosomal protein N' YP_005063278.1 PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase YP_005063279.1 PFAM: Formyl transferase; Formyl transferase, C-terminal domain; TIGRFAM: methionyl-tRNA formyltransferase YP_005063280.1 PFAM: Patatin-like phospholipase YP_005063281.1 PFAM: Radical SAM superfamily; TIGRFAM: radical SAM protein, TIGR01212 family YP_005063282.1 PFAM: VanZ like family YP_005063283.1 PFAM: Fumarate hydratase (Fumerase); TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region YP_005063284.1 PFAM: Fumarase C-terminus; TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region YP_005063285.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Domain amino terminal to FKBP-type peptidyl-prolyl isomerase YP_005063286.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; HAD superfamily (subfamily IA) hydrolase, TIGR02254 YP_005063290.1 PFAM: HIT domain YP_005063291.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain YP_005063294.1 PFAM: Sulfite exporter TauE/SafE YP_005063295.1 PFAM: Iron-containing alcohol dehydrogenase YP_005063296.1 PFAM: Ribose/Galactose Isomerase; TIGRFAM: sugar-phosphate isomerases, RpiB/LacA/LacB family YP_005063297.1 PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain YP_005063298.1 PFAM: Transketolase, thiamine diphosphate binding domain YP_005063299.1 PFAM: Aldose 1-epimerase YP_005063300.1 PFAM: Tripartite tricarboxylate transporter family receptor YP_005063302.1 PFAM: Tripartite tricarboxylate transporter TctA family YP_005063303.1 PFAM: L-fucose isomerase, C-terminal domain YP_005063304.1 PFAM: ROK family YP_005063305.1 PFAM: Bacterial extracellular solute-binding protein YP_005063306.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005063307.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005063308.1 PFAM: Glycosyl hydrolases family 31 YP_005063309.1 PFAM: DNA/RNA non-specific endonuclease YP_005063310.1 PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family YP_005063311.1 PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component YP_005063312.1 PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit YP_005063313.1 PFAM: D-mannonate dehydratase (UxuA); TIGRFAM: mannonate dehydratase YP_005063314.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_005063315.1 PFAM: Nitroreductase family YP_005063316.1 PFAM: LrgA family YP_005063317.1 PFAM: LrgB-like family; TIGRFAM: TIGR00659 family protein YP_005063318.1 PFAM: Uncharacterized BCR, YitT family COG1284; Uncharacterized protein conserved in bacteria (DUF2179) YP_005063319.1 PFAM: Mannitol dehydrogenase C-terminal domain; Mannitol dehydrogenase Rossmann domain YP_005063320.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_005063321.1 PFAM: D-mannonate dehydratase (UxuA); TIGRFAM: mannonate dehydratase YP_005063322.1 PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase YP_005063323.1 PFAM: Uncharacterised protein family (UPF0158) YP_005063324.1 PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase YP_005063325.1 PFAM: Citrate lyase ligase C-terminal domain; TIGRFAM: [citrate (pro-3S)-lyase] ligase YP_005063326.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_005063327.1 PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_005063328.1 PFAM: Tripartite tricarboxylate transporter family receptor YP_005063330.1 PFAM: Tripartite tricarboxylate transporter TctA family YP_005063331.1 PFAM: Malonate decarboxylase delta subunit (MdcD); TIGRFAM: citrate lyase acyl carrier protein YP_005063332.1 PFAM: HpcH/HpaI aldolase/citrate lyase family; TIGRFAM: citrate lyase, beta subunit YP_005063333.1 PFAM: Citrate lyase, alpha subunit (CitF); TIGRFAM: citrate lyase, alpha subunit YP_005063334.1 PFAM: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase; TIGRFAM: holo-ACP synthase CitX YP_005063335.1 PFAM: ATP:dephospho-CoA triphosphoribosyl transferase; TIGRFAM: triphosphoribosyl-dephospho-CoA synthase CitG YP_005063336.1 PFAM: LD-carboxypeptidase YP_005063338.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005063339.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005063340.1 PFAM: Bacterial extracellular solute-binding protein YP_005063341.1 PFAM: Glycosyl hydrolases family 15 YP_005063342.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_005063343.1 PFAM: CAAX amino terminal protease family YP_005063344.1 PFAM: Domain of unknown function DUF83 YP_005063345.1 PFAM: UvrD/REP helicase YP_005063346.1 PFAM: HD domain; GGDEF domain; Predicted histidine kinase sensor domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_005063347.1 PFAM: Malate/L-lactate dehydrogenase YP_005063348.1 PFAM: L-fucose isomerase, C-terminal domain; L-fucose isomerase, first N-terminal domain; L-fucose isomerase, second N-terminal domain; TIGRFAM: L-fucose isomerase YP_005063349.1 PFAM: RbsD / FucU transport protein family YP_005063350.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain YP_005063351.1 PFAM: L-rhamnose isomerase (RhaA); TIGRFAM: L-rhamnose isomerase YP_005063352.1 PFAM: Class II Aldolase and Adducin N-terminal domain YP_005063353.1 PFAM: family; TIGRFAM: rhamnose ABC transporter, rhamnose-binding protein YP_005063354.1 PFAM: ABC transporter YP_005063355.1 PFAM: Branched-chain amino acid transport system / permease component YP_005063356.1 PFAM: Branched-chain amino acid transport system / permease component YP_005063357.1 PFAM: Domain of unknown function (DUF718); TIGRFAM: L-rhamnose 1-epimerase YP_005063358.1 PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain YP_005063359.1 PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme YP_005063360.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase YP_005063361.1 PFAM: Dehydrogenase E1 component; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain YP_005063363.1 PFAM: short chain dehydrogenase YP_005063364.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase YP_005063365.1 PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain YP_005063366.1 PFAM: family YP_005063367.1 PFAM: ABC transporter YP_005063368.1 PFAM: Branched-chain amino acid transport system / permease component YP_005063369.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_005063370.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase YP_005063371.1 PFAM: Aldo/keto reductase family YP_005063372.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family YP_005063373.1 PFAM: Transaldolase; TIGRFAM: fructose-6-phosphate aldolase, TalC/MipB family YP_005063375.1 PFAM: Aminotransferase class I and II YP_005063377.1 PFAM: Beta-eliminating lyase YP_005063378.1 PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase YP_005063379.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_005063381.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain YP_005063382.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain YP_005063383.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005063384.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005063385.1 PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: ribosomal protein S12 methylthiotransferase RimO; radical SAM methylthiotransferase, MiaB/RimO family YP_005063386.1 PFAM: UvrD/REP helicase YP_005063387.1 PFAM: Aminotransferase class-III; manually curated YP_005063388.1 PFAM: Ribosomal protein L13; TIGRFAM: ribosomal protein L13, bacterial type YP_005063389.1 PFAM: Ribosomal protein S9/S16 YP_005063390.1 PFAM: RecX family YP_005063391.1 PFAM: Sodium/calcium exchanger protein; TIGRFAM: K+-dependent Na+/Ca+ exchanger related-protein YP_005063392.1 PFAM: EamA-like transporter family; manually curated YP_005063393.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: tryptophan synthase, beta subunit YP_005063394.1 PFAM: Thioredoxin; TIGRFAM: thioredoxin YP_005063395.1 PFAM: Membrane dipeptidase (Peptidase family M19) YP_005063396.1 PFAM: DNA alkylation repair enzyme YP_005063397.1 PFAM: Glycerate kinase family; TIGRFAM: glycerate kinase YP_005063398.1 PFAM: GntP family permease YP_005063399.1 PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family YP_005063400.1 PFAM: TrkA-N domain; TrkA-C domain YP_005063402.1 PFAM: alpha/beta hydrolase fold YP_005063403.1 PFAM: Heavy-metal-associated domain YP_005063404.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_005063405.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_005063406.1 PFAM: Predicted membrane protein (DUF2078) YP_005063407.1 PFAM: Phenazine biosynthesis-like protein; TIGRFAM: phenazine biosynthesis protein PhzF family YP_005063408.1 PFAM: ABC transporter YP_005063409.1 PFAM: Branched-chain amino acid transport system / permease component YP_005063411.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_005063413.1 PFAM: Domain of unknown function (DUF386); TIGRFAM: uncharacterized protein, YhcH/YjgK/YiaL family YP_005063414.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_005063415.1 PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family YP_005063416.1 PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component YP_005063417.1 PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit YP_005063418.1 PFAM: Dihydrodipicolinate synthetase family YP_005063419.1 PFAM: HpcH/HpaI aldolase/citrate lyase family YP_005063420.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_005063421.1 PFAM: Memo-like protein YP_005063422.1 PFAM: AMMECR1; TIGRFAM: uncharacterized protein, PH0010 family YP_005063423.1 PFAM: Radical SAM superfamily YP_005063424.1 PFAM: Uncharacterized conserved protein (DUF2196); TIGRFAM: conserved hypothetical protein YP_005063425.1 PFAM: ABC transporter YP_005063426.1 PFAM: Putative redox-active protein (C_GCAxxG_C_C); TIGRFAM: C_GCAxxG_C_C family probable redox protein YP_005063427.1 PFAM: AIR carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurE protein YP_005063428.1 PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase YP_005063429.1 PFAM: Phosphoribosyl transferase domain; Glutamine amidotransferases class-II; TIGRFAM: amidophosphoribosyltransferase YP_005063430.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylaminoimidazole synthetase YP_005063431.1 PFAM: Formyl transferase; IMP cyclohydrolase-like protein; TIGRFAM: phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent; IMP cyclohydrolase YP_005063432.1 PFAM: AICARFT/IMPCHase bienzyme YP_005063433.1 PFAM: Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C domain; TIGRFAM: phosphoribosylamine--glycine ligase YP_005063434.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylformylglycinamidine synthase, clade II YP_005063435.1 PFAM: Hsp20/alpha crystallin family YP_005063436.1 PFAM: Cupin domain YP_005063437.1 PFAM: Oxidoreductase FAD-binding domain; Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B; Oxidoreductase NAD-binding domain YP_005063438.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthase (NADPH), homotetrameric YP_005063439.1 PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YP_005063440.1 PFAM: 5-formyltetrahydrofolate cyclo-ligase family; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase YP_005063441.1 PFAM: Cobalt transport protein YP_005063442.1 PFAM: ABC transporter YP_005063443.1 PFAM: pfkB family carbohydrate kinase; TIGRFAM: 1-phosphofructokinase; hexose kinase, 1-phosphofructokinase family YP_005063444.1 PFAM: Bacterial extracellular solute-binding protein YP_005063445.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005063446.1 PFAM: ABC transporter; TOBE domain YP_005063447.1 PFAM: Alcohol dehydrogenase GroES-like domain YP_005063448.1 PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain YP_005063451.1 PFAM: Protein of unknown function (DUF1207) YP_005063453.1 PFAM: T5orf172 domain YP_005063456.1 PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain) YP_005063457.1 PFAM: MerR family regulatory protein; TipAS antibiotic-recognition domain YP_005063459.1 PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA YP_005063460.1 PFAM: Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetases class II (A); TIGRFAM: alanine--tRNA ligase YP_005063461.1 PFAM: Major Facilitator Superfamily YP_005063462.1 PFAM: Phenazine biosynthesis-like protein; TIGRFAM: phenazine biosynthesis protein PhzF family YP_005063463.1 PFAM: Methyltransferase domain YP_005063464.1 PFAM: Radical SAM superfamily; TIGRFAM: 23S rRNA m2A2503 methyltransferase YP_005063465.1 PFAM: OPT oligopeptide transporter protein; TIGRFAM: putative oligopeptide transporter, OPT family YP_005063467.1 PFAM: GTPase of unknown function; TIGRFAM: GTP-binding protein HflX YP_005063468.1 PFAM: GTPase of unknown function; Protein of unknown function (DUF933); TIGRFAM: GTP-binding protein YchF YP_005063470.1 PFAM: Radical SAM superfamily YP_005063472.1 PFAM: Toprim domain; DNA topoisomerase; TIGRFAM: DNA topoisomerase I, bacterial YP_005063474.1 PFAM: SAM domain (Sterile alpha motif) YP_005063475.1 PFAM: Bacterial regulatory proteins, tetR family YP_005063476.1 PFAM: SCP-2 sterol transfer family YP_005063477.1 PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain YP_005063478.1 PFAM: Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus YP_005063481.1 PFAM: RibD C-terminal domain YP_005063482.1 PFAM: MarR family YP_005063483.1 PFAM: Major Facilitator Superfamily YP_005063486.1 PFAM: Large-conductance mechanosensitive channel, MscL; TIGRFAM: large conductance mechanosensitive channel protein YP_005063487.1 PFAM: Receptor family ligand binding region YP_005063488.1 PFAM: Branched-chain amino acid transport system / permease component YP_005063489.1 PFAM: Branched-chain amino acid transport system / permease component YP_005063490.1 PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter YP_005063491.1 PFAM: ABC transporter YP_005063492.1 PFAM: CBS domain; ACT domain YP_005063493.1 PFAM: Smr domain YP_005063494.1 PFAM: Translation initiation factor 1A / IF-1; TIGRFAM: translation initiation factor IF-1 YP_005063495.1 PFAM: Sodium:neurotransmitter symporter family YP_005063496.1 PFAM: Serine hydroxymethyltransferase YP_005063497.1 PFAM: Glycine cleavage H-protein; TIGRFAM: glycine cleavage system H protein YP_005063498.1 PFAM: Glycine cleavage system P-protein YP_005063499.1 PFAM: Aminotransferase class-V YP_005063500.1 PFAM: Amidohydrolase family; TIGRFAM: D-hydantoinase; dihydroorotase, multifunctional complex type YP_005063501.1 PFAM: haloacid dehalogenase-like hydrolase; Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; cytidine deaminase, homotetrameric YP_005063502.1 PFAM: Phospholipase D Active site motif YP_005063505.1 PFAM: Ribose/Galactose Isomerase; TIGRFAM: ribose 5-phosphate isomerase B; sugar-phosphate isomerases, RpiB/LacA/LacB family YP_005063506.1 PFAM: DRTGG domain; DHH family; DHHA2 domain YP_005063507.1 PFAM: HD domain; Region found in RelA / SpoT proteins; TGS domain; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family YP_005063508.1 PFAM: Methyltransferase small domain; TIGRFAM: HemK family putative methylases; protein-(glutamine-N5) methyltransferase, release factor-specific YP_005063509.1 PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 1 YP_005063510.1 PFAM: Major Facilitator Superfamily YP_005063511.1 PFAM: Cupin domain; Helix-turn-helix YP_005063512.1 PFAM: NAD dependent epimerase/dehydratase family YP_005063513.1 PFAM: Aminotransferase class I and II; TIGRFAM: 8-amino-7-oxononanoate synthase; 2-amino-3-ketobutyrate coenzyme A ligase YP_005063514.1 PFAM: Acetyltransferase (GNAT) family YP_005063515.1 PFAM: Exonuclease; Exonuclease C-terminal YP_005063517.1 PFAM: Hexokinase YP_005063518.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_005063519.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005063520.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005063521.1 PFAM: Bacterial extracellular solute-binding protein YP_005063522.1 PFAM: Beta-galactosidase trimerisation domain YP_005063523.1 PFAM: CutC family YP_005063524.1 PFAM: AhpC/TSA family YP_005063525.1 PFAM: DNA mismatch endonuclease Vsr; TIGRFAM: DNA mismatch endonuclease Vsr; manually curated YP_005063526.1 PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YP_005063527.1 PFAM: Phosphomethylpyrimidine kinase YP_005063528.1 PFAM: Phosphorylase superfamily YP_005063530.1 PFAM: Patatin-like phospholipase YP_005063531.1 PFAM: Radical SAM superfamily YP_005063533.1 PFAM: Amino acid kinase family; TIGRFAM: uridylate kinase, putative YP_005063534.1 PFAM: Transcriptional regulator PadR-like family YP_005063535.1 PFAM: Protein of unknown function (DUF2812) YP_005063537.1 PFAM: Metallo-beta-lactamase superfamily YP_005063539.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family YP_005063540.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family YP_005063541.1 PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tyrosyl-tRNA synthetase YP_005063543.1 PFAM: Methyltransferase domain YP_005063545.1 PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_005063546.1 PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family YP_005063547.1 PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family YP_005063548.1 PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family YP_005063549.1 PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component YP_005063550.1 PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit YP_005063552.1 PFAM: family YP_005063553.1 PFAM: ABC transporter YP_005063554.1 PFAM: Branched-chain amino acid transport system / permease component YP_005063555.1 PFAM: Branched-chain amino acid transport system / permease component YP_005063556.1 PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family YP_005063557.1 PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_005063558.1 PFAM: family YP_005063559.1 PFAM: HSP20-like domain of unknown function (DUF1813) YP_005063560.1 PFAM: Recombinase; Resolvase, N terminal domain YP_005063561.1 PFAM: Recombinase; Resolvase, N terminal domain YP_005063568.1 PFAM: Bacterial regulatory protein, arsR family YP_005063569.1 PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase YP_005063571.1 PFAM: Cation efflux family; SPFH domain / Band 7 family; TIGRFAM: cation diffusion facilitator family transporter; HflK protein YP_005063572.1 PFAM: SPFH domain / Band 7 family; TIGRFAM: HflC protein YP_005063573.1 PFAM: SPFH domain / Band 7 family; TIGRFAM: HflK protein YP_005063574.1 PFAM: PPIC-type PPIASE domain YP_005063575.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_005063576.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_005063577.1 TIGRFAM: radical SAM additional 4Fe4S-binding domain YP_005063589.1 PFAM: Head fiber protein YP_005063590.1 PFAM: Phage capsid family; TIGRFAM: phage major capsid protein, HK97 family YP_005063591.1 PFAM: Clp protease; manually curated YP_005063592.1 PFAM: Phage portal protein; TIGRFAM: phage portal protein, HK97 family YP_005063593.1 PFAM: Phage Terminase YP_005063596.1 PFAM: AIG2-like family YP_005063597.1 PFAM: Putative amidoligase enzyme YP_005063604.1 PFAM: DNA methylase; ParB-like nuclease domain YP_005063605.1 PFAM: S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, N-terminal domain; S-adenosylmethionine synthetase, central domain; TIGRFAM: S-adenosylmethionine synthetase YP_005063606.1 PFAM: Phage terminase, small subunit YP_005063607.1 PFAM: HNH endonuclease; manually curated YP_005063609.1 PFAM: Protein of unknown function (DUF1492) YP_005063611.1 PFAM: SNF2 family N-terminal domain YP_005063612.1 PFAM: VRR-NUC domain YP_005063613.1 PFAM: Virulence-associated protein E YP_005063614.1 PFAM: AntA/AntB antirepressor YP_005063617.1 PFAM: DNA polymerase family A YP_005063618.1 PFAM: Protein of unknown function (DUF2815) YP_005063619.1 PFAM: Protein of unknown function (DUF2800) YP_005063624.1 PFAM: Domain of unknown function (DUF955) YP_005063625.1 PFAM: Helix-turn-helix YP_005063626.1 PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain YP_005063628.1 PFAM: DNA methylase YP_005063629.1 PFAM: Type III restriction enzyme, res subunit YP_005063631.1 manually curated YP_005063632.1 PFAM: Recombinase; Resolvase, N terminal domain; manually curated YP_005063634.1 PFAM: BFD-like [2Fe-2S] binding domain YP_005063635.1 PFAM: Signal peptidase (SPase) II; TIGRFAM: lipoprotein signal peptidase YP_005063636.1 PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase YP_005063637.1 PFAM: Bacterial regulatory protein, arsR family YP_005063638.1 PFAM: Recombinase; Resolvase, N terminal domain YP_005063639.1 manually curated YP_005063640.1 PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb) YP_005063641.1 PFAM: Bacterial regulatory proteins, tetR family YP_005063642.1 PFAM: Chloramphenicol acetyltransferase YP_005063643.1 PFAM: Lipase (class 3) YP_005063644.1 PFAM: Acetyltransferase (GNAT) family YP_005063645.1 PFAM: HAMP domain; His Kinase A (phosphoacceptor) domain YP_005063646.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_005063648.1 PFAM: Phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase precursor YP_005063649.1 PFAM: Glycosyl transferases group 1 YP_005063650.1 PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase YP_005063651.1 PFAM: SNARE associated Golgi protein YP_005063653.1 PFAM: Bacterial extracellular solute-binding protein YP_005063654.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; Hpt domain YP_005063655.1 PFAM: HD domain; Response regulator receiver domain YP_005063656.1 PFAM: HD domain; Response regulator receiver domain YP_005063658.1 PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_005063659.1 PFAM: HD domain; Response regulator receiver domain YP_005063660.1 PFAM: Protein of unknown function, DUF258; TIGRFAM: ribosome small subunit-dependent GTPase A YP_005063661.1 PFAM: Bacterial regulatory proteins, tetR family; manually curated YP_005063662.1 PFAM: HlyD family secretion protein YP_005063663.1 PFAM: ABC transporter YP_005063664.1 PFAM: ABC transporter YP_005063665.1 PFAM: ABC-2 type transporter YP_005063666.1 PFAM: ABC-2 type transporter YP_005063667.1 PFAM: LysE type translocator; TIGRFAM: L-lysine exporter YP_005063668.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; TIGRFAM: transcriptional regulator, ArgP family YP_005063669.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2200) YP_005063670.1 PFAM: Domain of unknown function DUF302 YP_005063671.1 PFAM: Thioredoxin; TIGRFAM: thioredoxin YP_005063673.1 PFAM: Lyase; TIGRFAM: argininosuccinate lyase YP_005063674.1 PFAM: Na+/Pi-cotransporter; PhoU domain; TIGRFAM: Na/Pi-cotransporter; manually curated YP_005063675.1 PFAM: ABC transporter YP_005063676.1 PFAM: Predicted permease YP_005063677.1 PFAM: Predicted permease YP_005063680.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_005063681.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_005063682.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase YP_005063683.1 PFAM: Aminotransferase class I and II YP_005063685.1 PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: arginine decarboxylase, biosynthetic YP_005063686.1 PFAM: Saccharopine dehydrogenase YP_005063687.1 PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; TIGRFAM: carboxynorspermidine decarboxylase YP_005063688.1 PFAM: Arginase family; TIGRFAM: agmatinase YP_005063690.1 PFAM: Uncharacterised protein family UPF0047; TIGRFAM: secondary thiamine-phosphate synthase enzyme YP_005063691.1 PFAM: EamA-like transporter family YP_005063693.1 PFAM: Major Facilitator Superfamily YP_005063694.1 PFAM: Pyridoxamine 5'-phosphate oxidase YP_005063696.1 PFAM: Inositol monophosphatase family YP_005063697.1 PFAM: haloacid dehalogenase-like hydrolase YP_005063698.1 PFAM: NADPH-dependent FMN reductase YP_005063699.1 PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative YP_005063700.1 PFAM: Glycine cleavage T-protein C-terminal barrel domain; Aminomethyltransferase folate-binding domain; TIGRFAM: glycine cleavage system T protein YP_005063703.1 PFAM: YbaK / prolyl-tRNA synthetases associated domain; TIGRFAM: ybaK/ebsC protein YP_005063704.1 PFAM: Branched-chain amino acid transport system / permease component YP_005063705.1 PFAM: Branched-chain amino acid transport system / permease component YP_005063706.1 PFAM: ABC transporter YP_005063707.1 PFAM: Basic membrane protein YP_005063708.1 PFAM: SLBB domain YP_005063709.1 PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family YP_005063710.1 PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; Aspartate carbamoyltransferase regulatory chain, metal binding domain; Aspartate carbamoyltransferase regulatory chain, allosteric domain; TIGRFAM: aspartate carbamoyltransferase YP_005063711.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: orotate phosphoribosyltransferase YP_005063712.1 PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: orotidine 5'-phosphate decarboxylase, subfamily 2 YP_005063713.1 PFAM: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase (subfamily 1) family protein YP_005063714.1 TIGRFAM: dihydroorotase, multifunctional complex type YP_005063717.1 PFAM: CorA-like Mg2+ transporter protein YP_005063718.1 PFAM: Uncharacterised protein family (UPF0153) YP_005063719.1 PFAM: S-adenosylmethionine-dependent methyltransferase YP_005063720.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; 2-phosphoglycolate phosphatase, prokaryotic YP_005063721.1 PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YP_005063723.1 PFAM: Competence protein YP_005063724.1 PFAM: Ribosomal RNA adenine dimethylase; TIGRFAM: dimethyladenosine transferase YP_005063725.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family YP_005063726.1 PFAM: Phosphate acetyl/butaryl transferase; TIGRFAM: phosphate acetyltransferase YP_005063727.1 PFAM: Major Facilitator Superfamily YP_005063728.1 PFAM: Prephenate dehydrogenase YP_005063729.1 PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: MiaB-like tRNA modifying enzyme; radical SAM methylthiotransferase, MiaB/RimO family YP_005063730.1 PFAM: Acetyltransferase (GNAT) family YP_005063731.1 TIGRFAM: serine O-acetyltransferase YP_005063732.1 PFAM: BioY family YP_005063733.1 PFAM: HTH domain; Biotin/lipoate A/B protein ligase family; TIGRFAM: BirA biotin operon repressor domain; birA, biotin-[acetyl-CoA-carboxylase] ligase region YP_005063734.1 PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase YP_005063735.1 PFAM: Bacterial regulatory proteins, tetR family YP_005063736.1 PFAM: Ribosomal prokaryotic L21 protein; TIGRFAM: ribosomal protein L21 YP_005063737.1 PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27 YP_005063738.1 PFAM: GTPase of unknown function; GTP1/OBG; TIGRFAM: Obg family GTPase CgtA YP_005063739.1 PFAM: Cytidylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain YP_005063740.1 PFAM: HD domain; TIGRFAM: putative HD superfamily hydrolase of NAD metabolism YP_005063742.1 PFAM: Domain of unknown function DUF143; TIGRFAM: iojap-like ribosome-associated protein YP_005063743.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_005063744.1 PFAM: Branched-chain amino acid transport system / permease component YP_005063745.1 PFAM: ABC transporter YP_005063747.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family YP_005063748.1 PFAM: ABC transporter YP_005063749.1 PFAM: Branched-chain amino acid transport system / permease component YP_005063750.1 PFAM: ABC transporter substrate binding protein YP_005063751.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain YP_005063752.1 PFAM: ABC transporter substrate binding protein YP_005063754.1 PFAM: Pyridoxal phosphate biosynthetic protein PdxA; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase YP_005063756.1 PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; TIGRFAM: cob(I)alamin adenosyltransferase YP_005063760.1 PFAM: Bacterial regulatory proteins, luxR family YP_005063761.1 PFAM: Lipase (class 3); Putative lysophospholipase YP_005063762.1 PFAM: Peptidase family S41 YP_005063763.1 PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-tRNA synthetase, bacterial family YP_005063764.1 PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: glycyl-tRNA synthetase, dimeric type YP_005063765.1 PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tyrosyl-tRNA synthetase YP_005063766.1 PFAM: NMT1/THI5 like YP_005063767.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005063768.1 PFAM: ABC transporter YP_005063769.1 PFAM: Desulfoferrodoxin; Desulfoferrodoxin, N-terminal domain; TIGRFAM: desulfoferrodoxin FeS4 iron-binding domain; desulfoferrodoxin; desulfoferrodoxin ferrous iron-binding domain YP_005063770.1 PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain YP_005063771.1 PFAM: Initiation factor 2 subunit family; TIGRFAM: eIF-2B alpha/beta/delta-related uncharacterized proteins; S-methyl-5-thioribose-1-phosphate isomerase YP_005063772.1 PFAM: Amidohydrolase family YP_005063773.1 PFAM: AMP-binding enzyme YP_005063774.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E YP_005063775.1 PFAM: Uracil DNA glycosylase superfamily YP_005063776.1 PFAM: GHMP kinases N terminal domain; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase YP_005063777.1 PFAM: SpoVG YP_005063778.1 PFAM: Ribosomal L25p family; TIGRFAM: ribosomal protein L25, Ctc-form YP_005063779.1 PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase YP_005063780.1 PFAM: PP-loop family; TIGRFAM: tRNA(Ile)-lysidine synthetase, C-terminal domain; tRNA(Ile)-lysidine synthetase, N-terminal domain YP_005063781.1 PFAM: FtsH Extracellular; Peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH YP_005063782.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; GTP-binding protein LepA C-terminus; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein domain YP_005063783.1 PFAM: Aldose 1-epimerase YP_005063784.1 PFAM: Xylose isomerase-like TIM barrel YP_005063785.1 PFAM: Phosphoribulokinase / Uridine kinase family; TIGRFAM: uridine kinase YP_005063786.1 PFAM: Domain of unknown function DUF37; TIGRFAM: conserved hypothetical protein YidD YP_005063788.1 PFAM: Calcineurin-like phosphoesterase; 5'-nucleotidase, C-terminal domain YP_005063789.1 PFAM: Xylose isomerase-like TIM barrel YP_005063790.1 PFAM: family YP_005063791.1 PFAM: ABC transporter YP_005063792.1 PFAM: Branched-chain amino acid transport system / permease component YP_005063793.1 PFAM: Branched-chain amino acid transport system / permease component YP_005063794.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase YP_005063795.1 PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YP_005063797.1 PFAM: S-adenosylmethionine-dependent methyltransferase YP_005063798.1 PFAM: Ferric uptake regulator family YP_005063799.1 PFAM: Rubrerythrin YP_005063800.1 PFAM: Amidohydrolase YP_005063801.1 PFAM: tRNA synthetases class I (E and Q), catalytic domain; tRNA synthetases class I (E and Q), anti-codon binding domain; TIGRFAM: glutaminyl-tRNA synthetase YP_005063804.1 PFAM: pfkB family carbohydrate kinase YP_005063805.1 PFAM: Trypsin YP_005063806.1 PFAM: Helicase conserved C-terminal domain; UvrB/uvrC motif; Type III restriction enzyme, res subunit; Ultra-violet resistance protein B; TIGRFAM: excinuclease ABC, B subunit YP_005063807.1 PFAM: Caspase domain YP_005063808.1 PFAM: Caspase domain YP_005063810.1 PFAM: ABC transporter YP_005063811.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005063812.1 PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: ABC transporter periplasmic binding protein, thiB subfamily YP_005063813.1 PFAM: YjeF-related protein N-terminus; Carbohydrate kinase; TIGRFAM: yjeF C-terminal region, hydroxyethylthiazole kinase-related; yjeF N-terminal region YP_005063815.1 PFAM: NUDIX domain; TIGRFAM: mutator mutT protein YP_005063817.1 PFAM: Bacterial regulatory proteins, lacI family YP_005063818.1 PFAM: family YP_005063819.1 PFAM: ABC transporter YP_005063820.1 PFAM: Branched-chain amino acid transport system / permease component YP_005063821.1 PFAM: L-arabinose isomerase; L-arabinose isomerase C-terminal domain YP_005063823.1 PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain YP_005063824.1 PFAM: 5TMR of 5TMR-LYT; HD domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_005063825.1 PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate adenylyltransferase YP_005063826.1 PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1; TIGRFAM: glycogen/starch synthases, ADP-glucose type YP_005063827.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase YP_005063828.1 PFAM: Glycoprotease family; TIGRFAM: universal bacterial protein YeaZ YP_005063829.1 PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: ATPase, YjeE family YP_005063832.1 PFAM: Ribosomal protein L20; TIGRFAM: ribosomal protein L20 YP_005063833.1 PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35 YP_005063834.1 PFAM: Translation initiation factor IF-3, C-terminal domain; Translation initiation factor IF-3, N-terminal domain; TIGRFAM: translation initiation factor IF-3 YP_005063835.1 PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases; fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist YP_005063837.1 PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family YP_005063842.1 PFAM: ABC transporter YP_005063843.1 PFAM: Bacterial regulatory proteins, tetR family YP_005063844.1 PFAM: FAD binding domain YP_005063845.1 PFAM: FAD binding domain YP_005063848.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB YP_005063849.1 PFAM: Protein of unknown function, DUF1537 YP_005063850.1 PFAM: Pyridoxal phosphate biosynthetic protein PdxA; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase YP_005063852.1 PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative YP_005063853.1 PFAM: Glycerate kinase family; TIGRFAM: glycerate kinase YP_005063854.1 PFAM: Uncharacterized conserved protein (DUF2088) YP_005063855.1 PFAM: 2-keto-3-deoxygluconate permease; TIGRFAM: 2-keto-3-deoxygluconate transporter YP_005063856.1 PFAM: SNO glutamine amidotransferase family; TIGRFAM: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 YP_005063857.1 PFAM: SOR/SNZ family; TIGRFAM: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 YP_005063858.1 PFAM: Aminotransferase class I and II; Bacterial regulatory proteins, gntR family YP_005063859.1 PFAM: Bacterial regulatory protein, Fis family; Putative sugar diacid recognition YP_005063865.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_005063866.1 PFAM: Protein of unknown function (DUF2992) YP_005063868.1 PFAM: M42 glutamyl aminopeptidase YP_005063869.1 PFAM: Creatinine amidohydrolase YP_005063870.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_005063871.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain YP_005063872.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain YP_005063873.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005063874.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005063875.1 PFAM: D-aminopeptidase YP_005063876.1 PFAM: SIS domain; Helix-turn-helix domain, rpiR family YP_005063877.1 PFAM: Calcineurin-like phosphoesterase; TIGRFAM: phosphoesterase, MJ0936 family YP_005063878.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; FAD binding domain in molybdopterin dehydrogenase; CO dehydrogenase flavoprotein C-terminal domain YP_005063879.1 PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain YP_005063880.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain YP_005063881.1 PFAM: PEGA domain YP_005063882.1 PFAM: TM2 domain YP_005063884.1 PFAM: Protein of unknown function (DUF2971) YP_005063887.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YP_005063888.1 PFAM: Uncharacterized conserved protein (DUF2088) YP_005063889.1 PFAM: Phosphoglycerate kinase YP_005063890.1 PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type II YP_005063891.1 PFAM: Xylose isomerase-like TIM barrel YP_005063892.1 PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YP_005063893.1 PFAM: KduI/IolB family YP_005063894.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain YP_005063895.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_005063896.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005063897.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005063898.1 PFAM: Bacterial extracellular solute-binding protein YP_005063900.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase YP_005063901.1 PFAM: Pyridoxal-phosphate dependent enzyme YP_005063902.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005063904.1 PFAM: ABC transporter; TOBE domain YP_005063905.1 PFAM: Bacterial extracellular solute-binding protein YP_005063906.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: putative selenate reductase, YgfK subunit YP_005063907.1 PFAM: Amidohydrolase family; TIGRFAM: putative selenium metabolism protein SsnA YP_005063908.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: putative selenium metabolism hydrolase YP_005063909.1 PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain YP_005063910.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain YP_005063911.1 PFAM: FAD binding domain in molybdopterin dehydrogenase; CO dehydrogenase flavoprotein C-terminal domain YP_005063912.1 PFAM: Amidohydrolase family YP_005063913.1 PFAM: FAD binding domain in molybdopterin dehydrogenase; CO dehydrogenase flavoprotein C-terminal domain; TIGRFAM: probable selenate reductase, FAD-binding subunit YP_005063914.1 PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; [2Fe-2S] binding domain; TIGRFAM: probable selenate reductase, molybdenum-binding subunit YP_005063915.1 PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: probable carbamoyltransferase YgeW YP_005063916.1 PFAM: Aldo/keto reductase family YP_005063918.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family YP_005063919.1 PFAM: MarR family YP_005063920.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_005063921.1 PFAM: ADP-ribosylglycohydrolase YP_005063922.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005063923.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005063924.1 PFAM: Bacterial extracellular solute-binding protein YP_005063925.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain YP_005063926.1 PFAM: Aldose 1-epimerase YP_005063927.1 PFAM: HI0933-like protein; TIGRFAM: flavoprotein, HI0933 family YP_005063928.1 PFAM: Major Facilitator Superfamily YP_005063929.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_005063930.1 PFAM: Bacterial extracellular solute-binding protein, family 7 YP_005063931.1 PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component YP_005063932.1 PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit YP_005063933.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase YP_005063934.1 PFAM: Mannitol dehydrogenase C-terminal domain; Mannitol dehydrogenase Rossmann domain YP_005063936.1 PFAM: Permease family YP_005063937.1 PFAM: Amidohydrolase family; TIGRFAM: adenine deaminase YP_005063938.1 PFAM: ABC transporter YP_005063939.1 PFAM: FecCD transport family YP_005063940.1 PFAM: Periplasmic binding protein YP_005063941.1 PFAM: Aldehyde dehydrogenase family; TIGRFAM: gamma-glutamyl phosphate reductase YP_005063942.1 PFAM: PUA domain; Amino acid kinase family; TIGRFAM: glutamate 5-kinase YP_005063944.1 PFAM: N-acetylmuramoyl-L-alanine amidase YP_005063945.1 PFAM: Uncharacterized conserved protein (DUF2174) YP_005063946.1 PFAM: Tripartite tricarboxylate transporter family receptor YP_005063947.1 PFAM: Tripartite tricarboxylate transporter TctB family YP_005063948.1 PFAM: Tripartite tricarboxylate transporter TctA family YP_005063949.1 PFAM: Bacterial regulatory proteins, lacI family YP_005063950.1 PFAM: FAD binding domain YP_005063951.1 PFAM: Nicotinate phosphoribosyltransferase (NAPRTase) family; TIGRFAM: putative nicotinate phosphoribosyltransferase YP_005063952.1 PFAM: Seryl-tRNA synthetase N-terminal domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: seryl-tRNA synthetase YP_005063953.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; TIGRFAM: pyrroline-5-carboxylate reductase; manually curated YP_005063954.1 PFAM: SpoU rRNA Methylase family; TIGRFAM: rRNA methylase, putative, group 2 YP_005063955.1 PFAM: Sigma-70, region 4; Putative sugar-binding domain YP_005063956.1 PFAM: family YP_005063957.1 PFAM: ABC transporter YP_005063958.1 PFAM: Branched-chain amino acid transport system / permease component YP_005063959.1 PFAM: Tryptophan synthase alpha chain YP_005063960.1 PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain YP_005063961.1 PFAM: Bacitracin resistance protein BacA; TIGRFAM: undecaprenyl-diphosphatase UppP YP_005063962.1 PFAM: Major Facilitator Superfamily YP_005063964.1 PFAM: Catalase; Catalase-related immune-responsive YP_005063965.1 PFAM: domain; Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, alpha subunit YP_005063966.1 PFAM: Pyruvate ferredoxin oxidoreductase beta subunit C terminal; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family YP_005063967.1 PFAM: Major Facilitator Superfamily YP_005063968.1 PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family YP_005063969.1 PFAM: D-ala D-ala ligase C-terminus; D-ala D-ala ligase N-terminus; TIGRFAM: D-alanine--D-alanine ligase YP_005063970.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase YP_005063971.1 TIGRFAM: uncharacterized protein TIGR03905 YP_005063973.1 PFAM: DEAD/DEAH box helicase; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated endonuclease Cas3-HD YP_005063974.1 PFAM: CRISPR-associated protein (Cas_Cas5); TIGRFAM: CRISPR-associated protein Cas5, subtype I-C/DVULG; CRISPR-associated protein Cas5, N-terminal domain YP_005063975.1 PFAM: CRISPR-associated protein (Cas_Csd1); TIGRFAM: CRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG YP_005063976.1 PFAM: Family of unknown function (DUF694); TIGRFAM: CRISPR-associated protein, CT1132 family; CRISPR-associated protein Cas7/Csd2, subtype I-C/DVULG YP_005063977.1 PFAM: Domain of unknown function DUF83; TIGRFAM: CRISPR-associated protein Cas4 YP_005063978.1 PFAM: CRISPR associated protein Cas1; TIGRFAM: CRISPR-associated endonuclease Cas1, subtype I-C/DVULG; CRISPR-associated endonuclease Cas1 YP_005063979.1 PFAM: CRISPR associated protein Cas2; TIGRFAM: CRISPR-associated endoribonuclease Cas2 YP_005063980.1 PFAM: Integrase core domain YP_005063982.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain YP_005063983.1 PFAM: YicC-like family, N-terminal region; Domain of unknown function (DUF1732); TIGRFAM: TIGR00255 family protein YP_005063984.1 PFAM: Cytidylate kinase; TIGRFAM: cytidylate kinase, putative YP_005063985.1 PFAM: Polyprenyl synthetase YP_005063987.1 PFAM: IPP transferase; TIGRFAM: tRNA dimethylallyltransferase YP_005063990.1 PFAM: Memo-like protein YP_005063991.1 PFAM: Domain of unknown function (DUF814); Fibronectin-binding protein A N-terminus (FbpA) YP_005063992.1 PFAM: Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase YP_005063993.1 PFAM: ABC transporter YP_005063994.1 PFAM: FecCD transport family YP_005063995.1 PFAM: Periplasmic binding protein YP_005063996.1 PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain YP_005063997.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_005063998.1 PFAM: AMP-binding enzyme YP_005063999.1 PFAM: CRS1 / YhbY (CRM) domain; TIGRFAM: putative RNA-binding protein, YhbY family YP_005064000.1 PFAM: Glycosyl hydrolase family 20, catalytic domain; Glycosyl hydrolase family 20, domain 2 YP_005064001.1 PFAM: ROK family YP_005064002.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005064003.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_005064004.1 PFAM: Bacterial extracellular solute-binding protein YP_005064005.1 PFAM: domain; Glycosyl hydrolases family 2, sugar binding domain YP_005064006.1 PFAM: Aldo/keto reductase family YP_005064007.1 PFAM: Phosphofructokinase; TIGRFAM: diphosphate--fructose-6-phosphate 1-phosphotransferase YP_005064008.1 PFAM: Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain YP_005064009.1 PFAM: Uncharacterized BCR, YaiI/YqxD family COG1671 YP_005064010.1 PFAM: Bacterial regulatory proteins, luxR family YP_005064011.1 PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: asparaginyl-tRNA synthetase YP_005064012.1 PFAM: Carbon starvation protein CstA YP_005064013.1 PFAM: AMP-binding enzyme YP_005064014.1 PFAM: ArsC family YP_005064015.1 PFAM: Metallo-beta-lactamase superfamily YP_005064016.1 PFAM: AMP-binding enzyme YP_005064017.1 PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase YP_005064018.1 PFAM: DJ-1/PfpI family; TIGRFAM: DJ-1 family protein YP_005064019.1 PFAM: Domain of unknown function (DUF1846) YP_005064020.1 PFAM: Calcineurin-like phosphoesterase; 5'-nucleotidase, C-terminal domain YP_005064021.1 PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein YP_005064022.1 PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein YP_005064023.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases YP_005064025.1 PFAM: HhH-GPD superfamily base excision DNA repair protein; 8-oxoguanine DNA glycosylase, N-terminal domain; TIGRFAM: 8-oxoguanine DNA-glycosylase (ogg) YP_005064026.1 PFAM: Putative cyclase; Shikimate / quinate 5-dehydrogenase; Glutamyl-tRNAGlu reductase, N-terminal domain; TIGRFAM: glutamyl-tRNA reductase YP_005064027.1 PFAM: Aldose 1-epimerase YP_005064030.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_005064031.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Domain amino terminal to FKBP-type peptidyl-prolyl isomerase YP_005064032.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region YP_005064033.1 PFAM: Initiation factor 2 subunit family; TIGRFAM: eIF-2B alpha/beta/delta-related uncharacterized proteins YP_005064034.1 PFAM: Phosphorylase superfamily YP_005064035.1 PFAM: Acetyltransferase (GNAT) family YP_005064036.1 PFAM: Metallo-beta-lactamase superfamily YP_005064037.1 PFAM: Sodium:solute symporter family; TIGRFAM: sodium/proline symporter; transporter, SSS family; IMG reference gene:2508846532_SP