-- dump date 20140620_070251 -- class Genbank::CDS -- table cds_note -- id note NP_435248.1 glimmer prediction; similar to E. coli fdoH NP_435249.1 glimmer prediction; similar to E. coli fdoI NP_435251.1 catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis YP_002000327.1 Has some similarity to S; meliloti SMa1907 and a group of conserved hypothetical proteins; Possible protein fragment created by insertion of the adjacent insertion element, TRm2011 NP_435257.1 glimmer prediction, with response regulator receiver domain YP_002000328.1 Similar to hypothetical protein from XautDRAFT_0850 [Xanthobacter autotrophicus Py2] NP_435258.2 glimmer prediction, C-terminus similar to hypothetical protein HI1048 - Haemophilus influenzae (strain Rd KW20) with transglutaminase-like superfamily domain NP_435260.1 catalyzes the formation of selenophosphate from selenide and ATP NP_435262.1 glimmer prediction; partially similar to serralysin (Serratia protease) precursor NP_435263.1 glimmer prediction; similar to ABC transporter ATP-binding protein NP_435264.2 glimmer prediction; similar to LysR-family transcriptional regulators with HTH domain NP_435266.1 glimmer prediction; start codon changed based on codon usage pattern YP_002000329.1 Similar to an approximately 75 amino acid-central region of GntR-family transcriptional regulators; Possible ORF fragment NP_435269.1 glimmer prediction; partial homology to succinate semialdehyde dehydrogenase; looks like fragmented gene NP_435270.1 looks like fragmented gene; glimmer prediction; partial homology to succ NP_435271.1 glimmer prediction; start codon changed based on similarity in protein database NP_435273.1 glimmer prediction; similar to short chain alcohol NP_435274.1 glimmer prediction; similar to Ca2+-binding protein regucalcin highly conserved in vertebrate species NP_435275.1 glimmer prediction; with gntR domain NP_435276.2 glimmer prediction; with gntR transcriptional regulator domain NP_435277.2 glimmer prediction; with homology to the domain of mandelate racemase / muconate lactonizing enzyme family NP_435278.1 glimmer prediction; similar to transcriptional regulator with gntR domain NP_435279.1 glimmer prediction; similar to sugar ABC transporter periplasmic sugar-binding protein NP_435280.1 glimmer prediction; C-terminal similar to sugar ABC transporter permease NP_435281.1 glimmer prediction; similar to sugar ABC transport ATP-binding protein NP_435282.1 catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis NP_435284.1 glimmer prediction; similar to pckR, regulator of pckA expression; also similar to LacI/GalR NP_435285.1 glimmer prediction; similar to amino acid (glutamine) ABC transporter permease NP_435286.1 glimmer prediction; similar to amino acid ABC transporter permease NP_435287.1 glimmer prediction; similar to amino acid ABC transporter periplasmic amino acid-binding protein NP_435288.1 glimmer prediction; similar to amino acid ABC transporter ATP-binding protein NP_435289.1 glimmer prediction; similar to D-isomer specific 2-hydroxyacid NP_435293.1 glimmer prediction. Interconversion of pyruvate and D-alanine. Similar to Smc01047 of S. meliloti chromosome NP_435295.1 glimmer prediction; with HTH domain, similar to LysR family NP_435297.1 glimmer prediction; similar to dipeptide transporter dipeptide-binding protein NP_435298.1 glimmer prediction; similar to dipeptide transport system permease NP_435299.1 glimmer prediction; similar to dipeptide ABC transporter dipeptide-binding protein NP_435300.1 glimmer prediction; similar to oligopeptide ABC transporter ATP-binding protein NP_435301.1 glimmer prediction; oligopeptide ABC transporter ATP-binding protein YP_002000330.1 Has weak similarity to PilT-like proteins and StbB- like plasmid stability proteins NP_435303.1 glimmer prediction; similar to sensory transduction histidine kinase with PAS domain NP_435304.1 glimmer prediction; with response regulator receiver domain NP_435305.2 glimmer prediction, sequence similarity to DnaJ and CbpA (co-chaperone-curved DNA binding protein) NP_435307.1 glimmer prediction; partial homology to alcohol NP_435310.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; the rhizobia and high GC gram-positive bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the R. leguminosarum protein in this cluster is transcribed under anaerobic conditions and is not necessary for growth NP_435311.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring NP_435312.1 glimmer prediction; C-terminus with CSD, 'Cold-shock' DNA-binding domain NP_435314.1 glimmer prediction, C-terminus with fatty acid desaturase domain NP_435316.1 glimmer prediction; similar to Smb20087 of S. meliloti pSymb YP_002000331.1 Similar to S; meliloti SMb20086 and to Agrobacterium tumefaciens Atu5288 & Atu5493 NP_435317.2 glimmer prediction, partial conserved with hypothetical membrane protein NP_435318.2 glimmer prediction, C-terminus similar to nitrogen fixation positive activator protein NP_435320.1 glimmer prediction; C-terminus with peptidase S8 (Subtilase) domain NP_435321.2 glimmer prediction; partial homology with RNA polymerase sigma factor; with Sigma-70 factor (ECF subfamily) domain NP_435325.1 activates RNA polymerase to cleave back-tracked RNA during elongational pausing NP_435326.1 catalyzes the formation of malonyl-CoA from malonate and CoA NP_435327.2 predicted by codon usage pattern and blastx. N-terminus of protein is similar to eukaryotic malonyl CoA decarboxylase, mitochondrial precursor. C-terminus is similar to various membrane proteins including those for C4 dicarboxylic acid transport NP_435332.2 similar to hypothetical 44.3 kDa protein Y4XJ in Rhizobium sp. NGR234 NP_435335.1 glimmer prediction; with ribosomal RNA adenine dimethylases domain NP_435338.1 glimmer prediction; C-terminal homology with hypothetical protein NP_435339.1 glimmer prediction; partial homology with hypothetical protein NP_435340.1 glimmer prediction; similar to glycine cleavage system transcriptional activator, with bacterial LysR regulatory helix-turn-helix protein domain NP_435342.1 glimmer prediction; start codon changed based on similarity to other proteins NP_435344.2 glimmer prediction; has short chain domain; SDR superfamily member NP_435346.1 glimmer prediction; with bacterial regulatory proteins, tetR domain NP_435350.2 glimmer prediction; partially similar to ABC transporter integral membrane protein and E. coli ribose transport protein rbsC NP_435351.1 glimmer prediction; partially similar to ribose ABC transporter permease NP_435353.2 glimmer prediction; partial homology to ABC transporter NP_435359.2 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2,5-hexodiulosonate NP_435360.1 glimmer prediction; similar to ABC sugar transport ATP binding protein NP_435361.2 glimmer prediction; start codon changed based on homology and codon usage. NP_435362.2 glimmer prediction; start codon changed based on homology and codon usage pattern NP_435365.2 glimmer prediction; with tetR domain NP_435368.1 converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer NP_435371.1 glimmer prediction; Very similar to trehalose-6-phosphate synthase (OtsA) of Rhizobium sp. NGR234 sym plasmid. S. meliloti appears to lack OtsB NP_435372.1 catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate NP_435374.1 glimmer prediction; similar to SMB0663 of S. meliloti pSymb NP_435375.1 glimmer prediction; C-terminus similar to actin interacting protein, a eukaryotic mitochondrial protein with lactate activity; also has similarity to glycolate oxidases NP_435376.2 glimmer prediction; C-terminus similar to bacterial regulatory proteins, gntR family NP_435379.1 glimmer prediction; C-terminus with DedA domain NP_435380.1 glimmer prediction; with partial homology to hypothetical protein NP_435382.1 3'-5' exonuclease of DNA polymerase III NP_435383.1 glimmer prediction; NADH:flavin oxidoreductase/NADH oxidase PF00724; homologous to DhtM (accession #P16099) from Methylophilus methylotrophus NP_435385.1 glimmer prediction; similar to E. coli GabD (accession P25526) and A. tumefaciens AttK (accession AAD43988); Aldehyde family, PF00171 NP_435386.1 glimmer prediction; similar to Agrobacterium tumefaciens AttL (accession AAD43989); iron-containing alcohol family, PF00465 NP_435388.1 glimmer prediction; bacterial regulatory protein, gntR family, PF00392 NP_435389.1 glimmer prediction; ABC transporter family, PF00005 NP_435390.1 glimmer prediction; ABC-2 type transporter PF01061 NP_435392.1 glimmer prediction; ThiJ/PfpI family, PF01965 YP_002000332.1 Has similarity to a short region in the carboxy- termini of proteins annotated as aldehyde dehydrogenases; Possible ORF fragment NP_435395.1 glimmer prediction; weak homologies to phosphatidylethanolamine N-methyltransferase (accession Q05197) from Rhodobacter sphaeroides NP_435397.1 glimmer prediction; bacterial regulatory protein, merR family, PF00376; homologous to MerR from Thiobacillus ferrooxidans (accession S18590) NP_435399.1 glimmer prediction; ORF also predicted in the Rhizobium sp. NGR234 sym plasmid sequence - gene y4E0 (accession P55438) NP_435405.1 glimmer prediction; N-terminal half of ORF is similar to ABC transporter family, PF00005; start codon changed based on homology and location of S-D consensus. NP_435407.1 glimmer prediction; similar to genes in Agrobacterium tumefaciens (ophB, S77573; accD, BAA87748; agaB, AAB88467) that are present on the Ti plasmid NP_435409.1 glimmer prediction; bacterial extracellular solute-binding protein, family 5, PF00496; similar to S. meliloti ORF23 (CAB01955) NP_435410.1 glimmer prediction; bacterial regulatory helix-turn-helix protein, LysR family, PF00126 NP_435411.1 glimmer prediction; phenylalanine and histidine ammonia-lyase, PF00221 NP_435412.1 glimmer prediction; N-terminus contains bacterial reg NP_435414.1 glimmer prediction; bacterial regulatory helix-turn-helix protein, LysR family, PF00126 NP_435418.1 glimmer prediction; bacterial regulatory helix-turn-helix protein, AraC family, PF00165 NP_435419.1 glimmer prediction; short chain motif, PF00106 NP_435421.1 glimmer prediction; similar to Smc00411 of S. meliloti chromosome NP_435423.1 glimmer prediction; short chain motif, PF00106 NP_435424.1 glimmer prediction; N-terminus motif - short chain dehydrogenase, PF00106; C-terminus motif - short chain dehydrogenase/reductase C-terminus, PF00678 YP_002000333.1 Predicted membrane protein; Has similarity to the carboxy-terminal half of DoxX family proteins; Together with the adjacent gene, SMa0333, may comprise a pseudogene NP_435426.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis NP_435428.1 glimmer prediction; N-terminus motif - short chain de NP_435429.1 stationary phase that binds TrpR repressor NP_435432.1 glimmer prediction; similar to General stress protein 14 (P80871) from Bacillus subtilis NP_435433.1 glimmer prediction; N-terminus - bacterial regulatory helix-turn-helix protein, LysR family, PF00126; C-terminus - NodD transcription activator carboxy terminal region, PF01046; start codon changed based on codon usage and similarity. NP_435435.1 glimmer prediction; start codon changed based on codon usage and homology. N-terminus is similar to Pirin-protein (NP_003653) from humans NP_435436.1 glimmer prediction; bacterial helix-turn-helix regulatory protein, LysR family, PF00126 NP_435437.2 glimmer prediction; bacterial regulatory helix-turn-helix protein, LysR family, PF00126 NP_435446.1 glimmer prediction; bacterial regulatory helix-turn-helix protein, LysR family, PF00126 YP_002000334.1 pfam07235, DUF1427, Protein of unknown function (DUF1427); This family consists of several bacterial proteins of around 100 residues in length; The function of this family is unknown YP_002000335.1 Predicted membrane protein; Similar to S; meliloti SMa1817 NP_435452.1 catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate and L-glutamate from L-histidinol phosphate and 2-oxoglutarate NP_435453.2 glimmer prediction; N-terminus - short chain motif, PF00106; C-terminus - short chain dehydrogenase/reductase C-terminus motif, PF00678 NP_435454.1 glimmer prediction; ABC transporter PF00005 NP_435456.1 glimmer prediction; binding-protein-dependent transport systems inner membrane component, PF00528 NP_435458.3 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer NP_435459.1 zinc-binding motif, PF00107 NP_435460.1 glimmer prediction; bacterial regulatory protein, gntR family, PF00392 NP_435462.1 glimmer prediction; FMN-dependent motif, PF01070 NP_435467.1 glimmer prediction; C-terminal DNA ligase motif, PF01068 YP_002000336.1 Very similar to S; meliloti SMb21696 YP_002000337.1 Very weak similarity, possibly spurious, to domain of unknown function, DUF768 NP_435470.1 glimmer prediction; DNA ligase, PF1068 YP_002000338.1 Amino-terminus has similarity to conserved hypothetical proteins of COG5579; Carboxy-terminus has similarity to a short stretch of amino acids found in eukaryotic-type DNA primases NP_435478.2 glimmer prediction; integrase core domain, PF00665; identical to hypothetical protein 2 from R. meliloti ISRm1 (accession S37716) NP_435479.1 glimmer prediction; transposase, PF01527; ISRm1; start codon changed based on homology NP_435480.1 glimmer prediction; domain of unknown function, DUF20, PF01594 NP_435484.1 glimmer prediction; homologous to possible plasmid stability locus Yle from Agrobacterium tumefaciens octopine-type Ti plasmid NP_435488.1 glimmer prediction; possible adenylate cyclase domain NP_435489.1 glimmer prediction; bacterial extracellular solute-binding protein, family 5, PF00496 NP_435490.1 glimmer prediction; start codon changed based on homology NP_435491.2 glimmer prediction; start codon changed based on codon usage and homology; binding-protein-dependent transport systems inner membrane component motif, PF00528 NP_435492.2 glimmer prediction; ABC transporter PF00005 NP_435497.1 Catalyzes the reversible two-electron oxidation of formate to carbon dioxide. It allows the assimilation of carbon dioxide and provides energy for growth through oxidative phosphorylation coupled to the reduction of oxygen, nitrate, sulphate or fumarate YP_002000340.1 Has similarity to the central region of a group of conserved hypothetical proteins, including S; meliloti SMa2147, which contain a region with weak similarity to ParB-like nuclease domain NP_435500.1 glimmer prediction; inositol monophosphatase, PF00459 NP_435501.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine NP_435502.1 catalyzes the formation of L-proline from L-ornithine NP_435503.1 glimmer prediction; ABC transporter family, PF00005 NP_435504.1 glimmer prediction; binding-protein-dependent transpo NP_435505.1 glimmer prediction; binding-protein-dependent transport systems inner membrane component, PFam00528; similar to OccQ, octopine transport binding protein, also to arginine and histidine transport binding proteins NP_435506.1 glimmer prediction; bacterial extracellular solute-binding protein, family 3, PF00497 NP_435508.1 glimmer prediction; bacterial regulatory helix-turn-helix protein, LysR family, PF00126 NP_435510.1 glimmer prediction; binding-protein-dependent transport systems inner membrane component, PF00528 NP_435512.1 glimmer prediction; bacterial extracellular solute-binding protein, family 3 motif, PF00467 NP_435513.1 glimmer prediction; ABC transporter family, PF00005 NP_435514.1 glimmer prediction; D-isomer specific 2-hydroxyacid family, PF00389 NP_435515.1 glimmer prediction; zinc-binding family, PF00107 NP_435516.1 catalyzes the formation of 5-dehydro-D-gluconate from D-gluconate NP_435517.1 glimmer prediction Selected Met12 as start to avoid overlap with SMA0513. possible operon with SMA0512,SMA0513,SMA0514,SMA0516,SMA0518 NP_435518.1 glimmer prediction possible operon with SMA0512,SMA0513,SMA0514,SMA0516,SMA0518. best match to 3-hydroxyisobutyrate and D-threonine dehydratase NP_435519.1 glimmer prediction possible operon with SMA0512,SMA0513,SMA0514,SMA0516,SMA0518. may be involved in gluconate metabolism NP_435520.1 glimmer prediction weak (5e-7, 8/2000) match to first 60% of transcriptional regulator RpiR but finds none of the other 15 members of the family NP_435521.1 glimmer prediction, AUG start may be part of transcription unit with SMA0522, SMA0523, SMA0525, SMA0526, SMA0527 NP_435522.1 glimmer prediction, GUG start may be part of transcription unit with SMA0522, SMA0523, SMA0525, SMA0526, SMA0527. Small overlap with SMA0522 NP_435523.1 glimmer prediction, AUG start may be part of transcription unit with SMA0522, SMA0523, SMA0525, SMA0526, SMA0527. Best match (3e-16, 8/2000) to ABC iron transport system NP_435524.1 glimmer prediction trimmed by 4 amino acids to decrease overlap with SMA0525 and give AUG start. may be part of transcription unit with SMA0522, SMA0523, SMA0525, SMA0526, SMA0527 NP_435525.1 glimmer prediction, AUG start may be part of transcription unit with SMA0522, SMA0523, SMA0525, SMA0526, SMA0527. match to E. coli gpmB phosphoglycerate mutase (1e-20, 8/2000) and to E. coli cobC alpha-ribazole-5'-phosphate phosphatase (2e-15, 8/2000) over 85% of predicted coding region YP_002000341.1 Has weak, possibly spurious, similarity to the SAM- binding domain found in methyltransferases NP_435531.1 glimmer prediction weak match (e-04) to Pyrococcus hypothetical protein over 80% of length NP_435532.1 glimmer prediction ProDom match (3e-5) to plasmid stability protein from Pseudomonas syringae and to sequence from Sinorhizobium sp. NGR234 over amino terminal half of SMA0548 NP_435533.2 Catalyzes the hydrolytic cleavage of a carbon-halogen bond in N-ethylammeline NP_435534.2 glimmer prediction, GTG start moderate match (3e-21, 8/2000) to predicted allantoinases over about 50% of protein length NP_435536.1 glimmer prediction Good match to several LysR-related transcriptional regulators. In E. coli related to Xanthosine metabolism NP_435537.2 glimmer prediction carboxyl third has weak ProDom match (3e-3) to hypothetical proteins of similar length NP_435538.2 glimmer prediction match (5e-10, 8/2000) to several 4-carboxymuconolactone decarboxylases in 40% of the protein NP_435539.1 glimmer prediction, GTG start good match (7e-44, 8/2000) to hypothetical Xylella protein NP_435540.1 glimmer prediction excellent match (e-102, 8/2000) to aldehyde oxidases and dehydrogenases, oxidoreductases NP_435541.2 glimmer prediction start codon changed based on codon usage and homology; Excellent match (e-117) to Xylella hypothetical protein. Best match (e-22, 8/2000) to quinoprotein glucose protein, chain B. ProDom match (e-51) to central domain of family including glucose dehydrogenase, PQQ protein YP_002000342.1 Uncharacterized conserved protein, contains double- stranded beta-helix domain [Function unknown]; Weak similarity to cupin NP_435543.1 glimmer prediction Good match (e-57) of entire SMA0567 protein to carboxyl terminal third of Sinorhizobium meliloti acetoacetyl CoA synthetase NP_435544.1 glimmer prediction excellent match to cya3 from Sinorhizobium meliloti but match to only one 'real' adenyl cyclase, from Anabaena is only (e-7) and 25% of protein NP_435546.2 glimmer prediction matches (2e-16) hypothetical protein from Streptomyces coelicolor NP_435548.1 glimmer prediction Excellent match (e-48) to both LivK, the E. coli leucine-specific binding protein and LivJ, the E. coli Leu/Val/Ile binding protein involved in branched chain amino acid transport NP_435549.2 glimmer prediction Contains domain in carboxyl terminus that matches (e-31) adenyl cyclases. ProDom scores lower (e-7) to adenyl cyclase motifs NP_435551.1 glimmer prediction Excellent match (e-87) to nitrate transport protein ATP binding component nasD from Klebsiella oxytoca starting at amino acid 35 of glimmer prediction. Met33 of glimmer prediction has good SD sequence and was called SMA0581 start. ChrD, NasD and NrtC are synonyms. Possible operon with SMA0581, SMA0583 and SMA0585 NP_435552.1 glimmer prediction Possible operon with SMA0581, SMA0583 and SMA0585. Excellent match to nitrate transport proteins in Klebsiella (NasB) and cyanobacteria (NtrB) NP_435553.1 glimmer prediction Excellent match (e-143) with nitrate binding protein precursor proteins from several cyanobacteria. Possible operon with SMA0581, SMA0583 and SMA0585 NP_435555.1 glimmer prediction Excellent match to 64 amino acids at carboxyl terminus of much larger (44 kDa) protein from Sinorhizobium NGR234 NP_435556.1 glimmer prediction match (e-19) to two similar size (45 kDa) proteins in Sinorhizobium sp. NGR234 over entire length NP_435560.2 glimmer prediction, start codon changed based on codon usage; match to cya3 adenyl cyclase of S. meliloti but not to adenyl cyclases that matched with cya3. cya3 match over carboxyl 50% of protein. Catalytic domain is not present NP_435561.2 glimmer prediction match (6e-15) to most of Synechococcus hypothetical protein NP_435563.1 glimmer prediction, start codon changed based on codon usage pattern. NP_435566.1 CcoN; FixN NP_435567.1 CcoO; FixO NP_435568.1 glimmer prediction match (7e-7) to Azorhizobium caulinodans but not to other members of FixQ family NP_435569.1 good match to FixP proteins over entire length NP_435574.1 glimmer prediction domain in amino terminus matches (e-15) outer membrane proteins, domain in carboxyl terminus matches (e-16) hypothetical protein from Synechococcus NP_435575.1 porin involved in osmoregulation allowing water to move into and out of the cell in response to osmotic pressure NP_435577.1 glimmer prediction carboxyl half of protein matches (e-26) E. coli predicted membrane protein YbiO NP_435580.1 glimmer prediction match (e-21) to several hypothetical proteins from archaebacteria and eubacteria, some over full length NP_435583.1 glimmer prediction match (3e-8) to immunoreactive Brucella abortus protein in carboxyl half. Similar to SMA1086 of S. meliloti pSyma NP_435587.1 glimmer prediction matches domain (15%) of hypothetical protein Y4CF from Sinorhizobium pNGR234a plasmid See SMA0649 NP_435588.2 glimmer prediction matches domain (11%) of hypothetical protein Y4CF from Sinorhizobium pNGR234a plasmid. see SMA0647 YP_002000343.1 Possible secreted protein NP_435590.1 glimmer prediction excellent fit (e-134) to transposase in IS30 of Agrobacterium rhizogenes NP_435591.1 glimmer prediction good match to amino terminus of cytochrome c binding protein associated nitrate reductase involved in denitrification. Frameshift relation to SMA0659, the carboxyl terminus NP_435592.1 glimmer prediction good match to carboxyl terminus of cytochrome c binding protein associated nitrate reductase involved in denitrification. Frameshift relation to SMA0657, the amino terminus NP_435594.1 transcriptional regulator that positively regulated fixLJ operon; upregulated transcription by FixJ; part of global network that controls expression of aerobic respiratory terminal oxidases and carbon and nitrogen metabolic enzymes NP_435596.1 glimmer prediction match (e-10) to cya3 adenyl cyclase (CAB38103) over final two thirds (400 bp) but does not capture hits to the original adenyl cyclases used for cya3 assignment NP_435597.2 glimmer prediction match (e-26) to E. coli hypothetical membrane protein over 75% 0f length NP_435599.1 glimmer prediction. match (e-10 to e-14) to three hypothetical E. coli proteins over 70% of sequence. ProDom match (aa62-aa232) to multidrug carrier transmembrane family NP_435600.1 glimmer prediction match (e-76) to predicted regulatory proteins from several sources ProDom finds domain (e-74) but doesn't call function (8/2000) NP_435603.2 glimmer prediction. ProDom aa47-390 Family #PD005505 PROTEIN EXCHANGER AFFINITY CALCIUM 6e-38 Matches to diverse organisms including bacterial, yeasts and plants over entire protein. Manganese resistance NP_435604.2 glimmer prediction Met12 has good SD sequence match (e-16) to ABC glutamate/aspartate transporter protein NP_435605.1 catalyzes the uptake of putrescine via a proton symport mechanism, as well as the efflux of putrescine by a putrescine/ornithine antiport system NP_435606.1 glimmer prediction, start codon changed based on homology NP_435607.4 glimmer prediction Excellent match (e-147) to various basic amino acid decarboxylases (lysine, arginine, ornithine) over entire length. May be in operon with adjacent genes NP_435608.2 glimmer prediction ProDom match (e=0.003) to zinc transport family NP_435609.1 glimmer prediction matches (e-53) ABC transport family that includes putrescine/ornithine antiport, lysine/cadaverine transport NP_435612.1 glimmer prediction amino terminus match (e-13) to amino terminal domain of larger predicted membrane protein of E. coli NP_435613.1 catalyzes the degradation of arginine to citruline and ammonia NP_435614.1 catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway NP_435615.1 reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP NP_435617.1 glimmer prediction ProDom match (e=0.001) to transmembrane ion channel family NP_435619.1 glimmer prediction match (e-8) to dihydrodipicolinate synthases but family is large with good hits in the range e-57 to proteins from near relatives. match in amino half NP_435620.1 glimmer prediction match (e-22) to isomerases, ProDom e-14. DgoA galactonate dehydratase domain homology in E.coli (P31458) but cannot trace assignment Trimmed to met19 of glimmer prediction to get good SD sequence and decrease overlap with SMA0707 NP_435621.1 glimmer prediction moved to met41 of glimmer prediction to align with match, decrease overlap with SMA0707 and get good SD sequence NP_435622.2 glimmer prediction match (e-40) to ThuF, a trehalose/maltose transport protein in S. meliloti NP_435623.1 glimmer prediction match (e-47) to several transporter proteins over entire length NP_435624.1 glimmer prediction Homology abruptly stops at LPTS (109920) sequence BUT alternate reading frame (ASNL>MTMA) gives e-15 hits to same class of proteins as SMA0713. ABC transport ATP binding protein hits (e-57) to amino terminus of matches NP_435625.1 glimmer prediction, Homology of SMA0713 abruptly stops at LPTS (109920) sequence BUT alternate reading frame (ASNL>MTMA) gives e-15 hits to same class of proteins as SMA0713 and SMA0714. ABC transport ATP binding protein hits (e-22) to carboxyl terminus of matches NP_435626.1 glimmer prediction match (e-23) to several UDP-glucose 4-epimerase over entire length NP_435627.1 glimmer prediction carboxyl half match (e-42) to calcium binding regulatory protein regucalcin from Xenopus amino half match (e-18) to bacterial transcription regulatory protein ProDom domain family #PD002768 NP_435628.1 glimmer prediction match (e-25) to full length of proteins assigned as gluconate dehydrogenase, 3-oxoacyl-acyl carrier protein reductase, 3-ketoacyl-ACP/CoA reductase, acetoacetyl-CoA reductase, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase, NodG-type reductase NP_435629.1 glimmer prediction match (e-4) to hypothetical Agrobacterium tumefaciens protein NP_435630.1 glimmer prediction carboxyl half match (e-3) to two hypothetical proteins NP_435637.1 glimmer prediction match (e-16) to various cold shock proteins, including ones from S. meliloti and NGR234 plasmid NP_435641.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is not essential for growth NP_435642.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring NP_435644.2 glimmer prediction Excellent match (e-58, 111/141) to hypothetical MucR family regulatory protein (O33682) near SyrB in R. meliloti YP_002000344.1 Has weak similarity to short length of sequence found in carboxy-terminus of transposases; Probable protein fragment NP_435645.1 glimmer prediction match (e-21) to several transcriptional activator proteins controlling D-serine deaminase and glycine cleavage system. ProDom finds match (e-8) to superfamily containing nodD and to DNA binding domain in parts of protein match begins around aa68 but left untrimmed from glimmer prediction NP_435646.1 glimmer prediction, start codon changed based on codon usage and S_D consensus; match (e-25) to benzene, anthranillate, toluene dioxygenases from various sources in amino half of protein NP_435647.1 glimmer prediction Trimmed to met20 of glimmer prediction to eliminate overlap with SMA0751 match (e-31) to aromatic (aniline, phthalate) dioxygenase reductase subunit over most of protein length ProDom finds three domains with matches to oxidoreductases NP_435648.1 glimmer prediction; flavin reductase like domain. Similar to SMA0758 of S. meliloti pSyma NP_435650.1 LysR family; bacterial regulatory helix-turn-helix motif NP_435651.2 glimmer prediction; flavin reductase like domain. Similar to SMA0753 of S. meliloti pSyma NP_435652.1 glimmer prediction; similarity to middle of FixJ NP_435653.1 Interacts with FixL, counteracts activity of FixLJ two-component system NP_435654.1 transcriptional regulator that positively regulated fixLJ operon; upregulated transcription by FixJ; part of global network that controls expression of aerobic respiratory terminal oxidases and carbon and nitrogen metabolic enzymes NP_435655.1 glimmer prediction. local similarity to SMA1151 and SMA1223 of S. meliloti pSyma NP_435656.1 CcoN; FixN NP_435657.1 CcoO; FixO NP_435659.1 translation start extended 57 residues upstream from glimmer prediction to better coincide with starts of other cytochrome c oxidases NP_435660.1 glimmer prediction; heavy metal associated domain; partial similarity to FixI NP_435662.1 Required for nodulation of Medicago littoralis NP_435663.1 Required for host specific nodulation of Medicago littoralis NP_435665.1 glimmer prediction; similarity to IstB-like ATP binding protein; identical to Sma1073 NP_435666.1 glimmer prediction; similarity to transposases; local identity to SMA1070 YP_002000345.1 Has similarity to hypothetical proteins from Rhizobium sp; NGR234 plasmid pNGR234a and partial similarity to ISRm30 transposase of S; meliloti; Possible truncated ORF NP_435667.1 glimmer prediction; similar to hypothetical 16.8 kDa protein Y4OM from NGR234. Identical to S. meliloti chromosomal protein Smc02302 NP_435668.1 glimmer prediction; similar to hypothetical 9.6 kDa protein Y40L from NGR234 NP_435669.1 glimmer prediction; very similar to hypothetical 78.7 kDa protein Y4BA/Y4PH of NGR234; local similarity to IS-like sequences NP_435670.1 glimmer prediction; Integrase core domain similarity; identical to N-terminus of SMA1070 NP_435674.1 glimmer prediction; alpha/beta hydrolase fold similarity NP_435675.2 glimmer prediction; Flavin reductase like domain NP_435676.1 glimmer prediction; bacterial luciferase similarity NP_435678.1 glimmer prediction; trimmed three residues to give better Shine- Dalgarno and initiating Met; similarity to 4-nitrophenylphosphatase domain NP_435679.2 glimmer prediction; similarity to bacterial extracellular solute-binding proteins NP_435680.1 glimmer prediction; similarity to spermidine/putrescine ABC transporter permease (potB) NP_435681.1 glimmer prediction; similarity to spermidine/putrescine transport system permease potC NP_435682.1 glimmer prediction; conserved hypothetical ABC-transporter ATP-binding protein NP_435684.1 trimmed 44 amino acids from glimmer prediction to give better Shine-Dalgarno and initiating Met and better match to SyrB NP_435685.2 glimmer prediction;trimmed seven residues to give better Shine- Dalgarno and initiating Met NP_435687.1 Similarity to 4Fe-4S binding domain NP_435688.1 trimmed 14 residues from glimmer prediction to give better Shine-Dalgarno and initiating Met NP_435689.2 sigma54-dependent; Activator of nif operons NP_435690.1 Possible 3Fe-4S cluster-containing protein NP_435691.1 trimmed five residues from glimmer prediction to give better Shine-Dalgarno and initiating Met; probable electron acceptor from FixAB NP_435692.1 trimmed 17 residues from glimmer prediction to give better Shine-Dalgarno and initiating Met; similarity to electron transfer flavoprotein alpha subunits NP_435693.1 trimmed eight residues from glimmer prediction to give better Shine-Dalgarno and initiating Met NP_435695.1 nitrogenase iron protein; nitrogenase component 2; with component 1, an molybdenum-iron protein, catalyzes the fixation of nitrogen to ammonia; nitrogen reductase provides electrons to the nitrogenase complex; in R. etli there are three essentially identical copies of nifH which are actively expressed during symbiosis NP_435697.1 translation start moved 63 codons upstream of glimmer prediction to give better Shine-Dalgarno and initiating Met, and concordance with ORFS from other organisms NP_435698.1 functions with NifN to assemble FeMo cofactor; functions in assembly of nitrogenase MoFe YP_002000346.1 Region from amino acid 58 to 154 has some similarity to dioxygenases; If expressed, SMa5036 may be a truncated or nonfunctional protein NP_435702.1 hypothetical protein; ORF between SyrM-dependent transcription start site and SyrA coding sequence NP_435703.1 Expression activated by SyrM NP_435704.1 transcription regulator; LysR family; Two other possible translation starts lie upstream; the one chosen aligns best with the NodD1 and NodD2 start sites. Helix-Turn-Helix motif in N-terminal portion. Expression activated by SyrM NP_435705.1 ORF in SyrM-NodD3 intergenic region YP_002000347.1 ORF in SyrM-NodD3 intergenic region, partial similarity to IS3 family transposases, hypothetical protein YP_002000348.1 Very short ORF fragment with transposase similarity, hypothetical protein NP_435708.1 transcription regulator; LysR family; SYRM ACTIVATES NOD GENE EXPRESSION VIA NODD3 AND EXO GENE EXPRESSION VIA SYRA. TWO POTENTIAL TRANSLATION START CODONS LEADING TO PROTEINS OF 326 OR 301 AA. LYSR FAMILY MEMBER. ACCESSION P18561 NP_435710.1 TRANSFERS ACTIVATED SULFATE (PAPS) TO NOD FACTOR. ACCESSION P06236 NP_435711.1 trimmed ten residues from glimmer prediction to give better Shine-Dalgarno and initiating Met and concordance with other NodF's;synthesizes Nod Factor fatty acyl chain NP_435712.1 SYNTHESIZES NOD FACTOR FATTY ACYL CHAIN. ACCESSION P06230 NP_435713.1 catalyzes the formation of 3-hydroxyacyl-ACP from 3-keto-acyl-ACP; in the rhizobia this protein interacts with NodF to allow for the synthesis of highly polyunsaturated fatty acids necessary for nodulation NP_435714.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP NP_435715.1 in Rhizobium meliloti this protein is involved in the synthesis of nodulation factors that are active on the roots of alfalfa; catalyzes formation of activated sulfate intermediate; converts ATP and sulfate to diphosphate and adenylylsulfate and then ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; the activated intermediate is transferred to the nodulation factors by NodH; may interact with NodP and NodQ; similar to the CysD and CysN proteins from EScherichia coli involved in cysteine biosynthesis NP_435716.2 ORF downstream of nodQ1 shows nucleotide sequence similarity to an A. tumefaciens insertion sequence trimmed nine residues from glimmer prediction to give better Shine-Dalgarno and initiating Met NP_435717.1 ACCESSION O52619 NP_435718.1 ATP-binding subunit; with NodJ is involved in the export of lipo-chitin oligosaccharide; involved in nodulation induction NP_435719.1 Catalyzes synthesis of Nod Factor backbone from N-acetylglucosamine monomers. ACCESSION ZZZRC4 NP_435720.1 Removes acetyl group from subunit of Nod Factor backbone prior to addition of fatty acid moiety. ACCESSION P02963 NP_435721.1 catalyzes the transfer of a fatty acyl group onto Nod factor, beta-(1,4)-N-acetylglucosamine oligosaccharide NP_435722.1 transcription regulator; LysR family; Activates nod box-dependent transcription in conjunction with plant inducer molecule. An alternative translation start lies three codons upstream. ACCESSION ZZZRDM NP_435724.1 functions with NifE to assemble FeMo cofactor; functions in assembly of nitrogenase MoFe NP_435725.1 Involved in root hair deformation factor on Medicago. ACCESSION P25200 NP_435726.1 glimmer prediction; probable inner membrane protein; similarity to AcrB/AcrD/AcrF transporter family. ACCESSION H71918 NP_435727.1 Involved in Medicago-specific Nod Factor biosynthesis. Similarity to HlyD family secretion proteins. ACCESSION P25196 NP_435728.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source NP_435731.1 glimmer prediction; similarity to DNA damage-inducible proteins. ACCESSION Q47155. ACCESSION AAF41808 YP_002000349.1 Has similarity to a region found in DNA polymerase; Possible nonfunctional protein; May contain frameshift; This predicted open reading frame overlaps with the downstream SMa0886 NP_435738.1 glimmer prediction; similarity to anti-restriction proteins. ACCESSION P52602 YP_002000350.1 Weak similarity to a group of small conserved hypothetical proteins of unknown function NP_435748.1 VirD4 family NP_435751.1 trimmed 19 residues from glimmer prediction to give better Shine-Dalgarno and concordance with other probable TraA conjugal transfer proteins NP_435752.1 glimmer prediction; two regions of similarity to uncharacterized protein families. Similar to SMB1251 on S. meliloti pSymb NP_435753.1 glimmer prediction; similarity to membrane sensor kinases, including NodV of Bradyrhizobium japonicum NP_435754.2 glimmer prediction; similarity to regulator component of two-component signal transduction systems, including NodW of Bradyrhizobium japonicum NP_435755.2 glimmer prediction; similarity to two-component response regulator receiver domain NP_435760.1 glimmer prediction, similar to AttB of Agrobacterium tumefaciens. NP_435761.1 glimmer prediction, similar to AttA2 of Agrobacterium tumefaciens. NP_435762.1 glimmer prediction; similar to AttA1 of Agrobacterium tumefaciens NP_435763.1 probable GntR-family transcriptional regulator; glimmer prediction; highly similar to AtrA of Agrobacterium tumefaciens; glimmer prediction; similarity to gntR family of bacterial regulatory proteins NP_435764.1 trimmed 30 codons from glimmer prediction to improve alignment and provide better Shine-Dalgarno and initiating Met. Highly similar to AtrB of Agrobacterium tumefaciens NP_435765.1 catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; catalytic NP_435766.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis NP_435767.1 glimmer prediction; most similar to PhoB response regulators; trimmed eight codons from glimmer prediction to give better Shine-Dalgarno and initiating Met and concordance with other phosphate regulatory proteins; similarity to PhoB two-component regulator NP_435769.2 glimmer prediction; similar to pSymb hypothetical protein (Smb20835) NP_435770.1 trimmed 50 codons from glimmer prediction to give better Shine-Dalgarno and initiating Met and concordance with other PhoB phosphate regulatory proteins NP_435771.1 glimmer prediction, start codon changed based on codon usage pattern; aminotransferase similarity NP_435774.1 glimmer prediction; similarity to integrase core domain NP_435775.1 glimmer prediction; similarity to PIN domain NP_435777.2 glimmer prediction; helix-turn-helix motif at N-terminus YP_002000351.1 Contains predicted helix-turn-helix motif; Is nearly identical to orf98 of pSmeSM11a, function unclear NP_435783.1 glimmer prediction; local similarity to transposase from IS1407 of Mycobacterium celatum NP_435784.1 glimmer prediction; similarity to transposases from Rhizobium tropici and Mycobacterium avium. NP_435785.2 glimmer prediction; C-terminal half similarity to C-terminal fourth of ExsG. ACCESSION CAA12536. Nearly identical to SMA1696 also on S. meliloti pSyma NP_435788.1 glimmer prediction; low glimmer score but faint overall similarity of this ORF to two bacterial hypothetical proteins. Lower similarity to other reading frames or directinos NP_435789.1 N-terminus has short segment homologous to blue (multi)-copper oxidases; see PROSITE; PDOC00076 NP_435790.2 Class VI.B. Start could be on the second GTG (3421) or later, given the overlap with the divergent gene SMa1009 NP_435791.2 glimmer prediction; similar to pSymb protein (Smb20560) NP_435792.1 glimmer prediction; poor codon usage for Sinorhizobium meliloti NP_435793.1 glimmer prediction; domain for cyclic nucleotide binding NP_435794.1 Start changed for RBS and homology with other ATPases NP_435795.1 MerR family NP_435796.1 Class VI.B. 2 other possible alternative initiation sites NP_435799.2 glimmer prediction; codon usage in N terminus is poor, and actual start may be internal to called ORF; cytochrome C domain residues 50-204 NP_435800.2 glimmer prediction; good codon usage NP_435802.1 glimmer prediction; homology to part of hypothetical Rhodospirillum protein NP_435805.1 Gene interrupted by ISRm1 NP_435807.1 glimmer prediction; very similar to Smc02280 of S. meliloti chromosome NP_435808.1 glimmer prediction; highly similar to Smc02281 of S. meliloti chromosome NP_435809.1 CopA related protein; very similar to Smc02282 of S. meliloti chromosome NP_435810.1 Related to Aeromonas CopC, plastocyanin and azurin. NP_435811.1 glimmer prediction; highly similar to Smc02284 of S. meliloti chromosome NP_435814.1 Related to Xylella fastidiosa AAF83574. Initiator codon changed to 20948 (likely translational coupling) NP_435815.1 similar to X. fastidiosa AAF83575. NP_435816.1 similar to X. fastidiosa AAF83576 NP_435817.1 MerR family transcriptional regulator similar to X. fastidiosa AAF83577. glimmer prediction NP_435818.1 glimmer prediction, start codon changed based on homology and codon usage; similar to X. fastidiosa AAF83578. NP_435822.2 glimmer prediction; slight overlap with downstream SMA1062 depending on called start NP_435823.1 glimmer prediction; poor codon usage in N-terminus, possibly start is later in called ORF NP_435824.1 similar to CAP family transcriptional regulators NP_435825.1 glimmer prediction; Recombinase/integrase domain; identical to part of SMA0779 and SMA0787 NP_435826.1 belongs to a possible new IS related to IS21 and IS1162 (IS3 family), also found in NGR234; identical to SMA0776 NP_435827.2 Related to Streptomyces epoxidase Q56185 NP_435828.1 Related to M. tuberculosis MPT70/MPT83 lipoproteins and to a domain of fasciclin. NP_435830.1 Initiator codon different from the one proposed in AF179401 NP_435832.2 250 first bases do not look coding. Frame-shifted sequence when compared to AF179401. NP_435833.1 glimmer prediction; highly similar to Smc04146 of S. meliloti chromosome NP_435834.1 Contains a duplication of CBS domains. Similar to SMA0639 of S. meliloti pSyma NP_435835.1 Lacks heavy metal associated (HMA) domains. Some similarity to S. meliloti FixI and ActP NP_435842.1 glimmer prediction; C-term overlaps 1096, possibly this is a spurious product; modest global homology to sensor kinase NP_435843.1 Initiation codon changed to allow for a PSORT predictable signal sequence. Probable cleavage site at position 21 NP_435847.1 glimmer prediction; partial cytochrome C homology; note apparent repeat of this motif about 1 kb upstream NP_435848.1 glimmer prediction; two conflicting ORFs but this one is longest and has some modest line ups with several bacteria proteins and hypothetical proteins NP_435849.1 found by blastX of region; cyt c fragment, note repeated about 1 kb downstream NP_435850.2 may start at internal ATG codon NP_435851.1 glimmer prediction. Some similarity to Smb21294 of S. meliloti pSymb NP_435855.1 similar to stage IV sporulation protein SpoIVFB from Bacillus subtilus. NP_435857.1 similar to cleavage and polyadenylation specificity factor NP_435858.1 glimmer prediction; poor codon usage NP_435859.1 glimmer prediction; poor codon usage for Sinorhizobium NP_435861.1 N-terminal truncated OmpR homologue. Probably non functional. NP_435862.1 Truncated receiver domain resulting from a frame-shift in a response regulator gene (SMa1139-SMa1138). Probably non functional NP_435864.1 Apparently a soluble FixL like protein. Contains an extra C-terminal receiver domain NP_435865.1 glimmer prediction, start codon changed based on codon usage and homology; similar to E. coli YfiQ NP_435866.1 similar to SMA1149, SMA1158 and SMA1231 on S. meliloti pSyma NP_435867.1 similar to SMA1147, SMA1158 and SMA1231 on S. meliloti pSyma NP_435868.1 Paralogue of orf151 located between fixK and fixN. Similar to SMA1223, also on S. meliloti pSyma. Partial homology to SMA0763 of pSyma NP_435869.1 OsmY related protein NP_435872.1 Initiator codon changed based on homology. NP_435873.2 similar to SMA1147, SMA1149 and SMA1231 on S. meliloti pSyma NP_435878.2 Initiator codon changed for better codon usage NP_435883.1 Highly similar to the C-terminal moiety of a Rhizobium leguminosarum sequence (accession S52311) NP_435884.1 Caution: strong overlap with SMa1174. Dubious gene, highly similar to the N-terminal moiety of a Rhizobium leguminosarum sequence (accession S52311) NP_435885.1 Caution: strong out of frame overlap with SMa1172. Possible defective frame-shifted transposase gene NP_435889.1 reduces nitrous oxide to nitrogen NP_435890.1 Start codon shifted from glimmer prediction by 3 bases (TTG --> ATG) NP_435892.1 ly involved in copper processing; glimmer prediction NP_435894.1 Start changed to 97837 because of better SD and potential translational coupling with nosL NP_435895.1 flavohemoprotein; catalyzes the formation of nitrate from nitric oxide; can also catalyze the reduction of dihydropteridine NP_435899.1 glimmer prediction; shorter ORF in another frame has better codon usage. This ORF may be spurious NP_435900.1 glimmer prediction; extensive homology to Cu resistance protein CopC NP_435905.1 Required for assembly or stability of the FixNOQP cbb3-type heme-copper oxidase NP_435906.1 Required for assembly or stability of the FixNOQP cbb3-type heme-copper oxidase. NP_435907.1 Required for assembly or stability of the FixNOQP cbb3-type heme-copper oxidase NP_435908.1 Membrane anchored component of the high affinity FixNOQP cbb3-type oxidase NP_435909.1 Component of the high affinity FixNOQP cbb3-type oxidase NP_435910.1 CcoO; FixO NP_435911.1 CcoN; FixN NP_435912.1 Start codon changed to an ATG with a good SD and much better codon usage NP_435913.1 transcriptional regulator that positively regulated fixLJ operon; upregulated transcription by FixJ; part of global network that controls expression of aerobic respiratory terminal oxidases and carbon and nitrogen metabolic enzymes NP_435914.1 FixK inducible inhibitor of the FixLJ 2-component system. NP_435915.1 response regulator for histidine kinase FixL; part of global network that controls expression of aerobic respiratory terminal oxidases and carbon and nitrogen metabolic enzymes NP_435916.1 Start codon determined experimentally. Activates FixJ by phosphorylation in microaerobic conditions. Contains an oxygen-sensing heme-containing PAS domain NP_435917.1 glimmer prediction; good overall similarity to hypothetical proteins; Similar to SMA1147, SMA1149, SMA1158 of S. meliloti pSyma NP_435918.1 glimmer prediction; high full length similarity to NapC NP_435920.1 periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC NP_435922.1 glimmer prediction picked ORF starting long upstream, overlapping real napE; predict start at Met within original ORF based on homology with other napF NP_435923.1 glimmer prediction; shorter than other napE but global similarity NP_435924.1 glimmer prediction; pseudoazurin, also called blue copper protein, a soluble electron transfer protein associated with periplasmic nitrite reductase; Cu-binding/plastocyanin domain; Cu-binding/plastocyanin domain NP_435925.1 glimmer prediction picked ORF start at codon 61; ATG picked further upstream based on BLASTX of upstream region, found homology to Pseudomonas NP_435926.1 glimmer prediction; global length homology to NirV precursor of Pseudomonas, catalyzing first step in denitrification NP_435927.1 glimmer prediction. Global full length homology of NirK-like Cu-containing nitrite reductase (dissimilatory). NP_435928.1 glimmer prediction; 30% global identity to ORF 396 in the denitrification gene cluster of Pseudomonas stutzein ;46% global identity to NnrS which is found divergently transcribed from NnrR, a transcription factor that regulates denitification in R. sphaeroides NP_435931.1 glimmer prediction; global similarity to dTDP-4-keto-L-rhamnose reductase from S. mutans (GI: 7514804) NP_435935.2 glimmer prediction, start codon changed based on homology and codon usage pattern; global homology to hypothetical protein in E.coli (GI: 1176281) NP_435936.2 glimmer prediction;C-terminal similarity to protein in B. japonicum (GI:6136304); ORF SMA1263 shows N-terminal similarity to this protein in B. japonicum NP_435937.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III NP_435938.1 glimmer prediction; NorD protein is required for nitric oxide reductase (Nor) protein activity in denitrifiers; specific function unknown; found in operon: norDQBCE NP_435939.1 Probable NorQ protein; glimmer prediction; NorQ is found in denitrifiers and is required for nitric oxide reductase (Nor) activity; found in norDQBCE operon NP_435940.1 glimmer prediction; NorB is found in denitifiers and is a structural protein in the nitric oxide reductase (Nor) protein complex; found in operon norDQBCE NP_435941.1 glimmer prediction; NorC is found in denitrifiers and is a structural protein in the nitric oxide reductase (Nor) protein complex; found in operon norDQBCE NP_435942.1 Probable NorE protein; glimmer prediction; NorE is found in denitrifiers and is involved in nitric oxide reduction; similar to subunit III of cytochrome c oxidases; found in operon norDQBCE NP_435943.1 glimmer prediction; shows similarity to NnrU in other denitrifiers (GI 3925406,GI 2130626); required for expression of Nir and Nor enzyme complexes in R. sphaeroides NP_435944.1 catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate NP_435945.2 glimmer prediction, start codon changed based on homology; conserved hypothetical protein (GI:7380584 GI: 7226949) NP_435947.1 glimmer prediction; conserved hypothetical protease NP_435948.1 glimmer prediction; conserved protease NP_435953.1 glimmer prediction; conserved tetR-like transcription regulator; contains TetR-like domain in N-terminus NP_435954.2 glimmer prediction; similar to antibiotic resistance protein (GI:7474435) and transport protein (GI:7466430) NP_435955.1 glimmer prediction; shows similarity to VirB11, a transmembrane ATPase involved in transport of macromolecular complexes in the virB complex and in Type IV secretion systems; contains conserved Walker Box NTP binding motif; found in virB operon NP_435956.1 glimmer prediction; similar to VirB10, a transmembrane protein of unknown function found in the virB protein complex and type IV secretion systems; found in virB operon NP_435957.1 glimmer prediction; similar to VirB9, a component of the VirB protein complex thought to interact with VirB7; may be a scaffold for assembly of the rest of the VirB complex and type IV secretion systems; found in virB operon NP_435958.1 glimmer prediction; similar to VirB9, a protein involved in forming the core of the VirB complex and type IV transporters; found in virB operon NP_435959.2 glimmer prediction; located in virB operon NP_435960.1 glimmer prediction; similar to VirB6, a protein involved in formation of the core of the VirB complex and Type IV secretion systems, found in virB operon NP_435961.2 glimmer prediction; similar to VirB5, a protein that is exported in by the VirB complex and type IV secretion systems; unknown function; found in virB operon NP_435962.1 glimmer prediction; similar to VirB4, an ATPase found in the virB complex and type IV secretion systems; contains Walker Box NTP-binding domain; found in virB operon NP_435963.2 glimmer prediction; similar to virB3 homologues; virB3 is an exported protein of unknown function in the virB complex and other type IV secretion systems; found in virB operon NP_435964.1 glimmer prediction; weak homology to VirB2 in Brucella; found in vir gene operon NP_435965.1 glimmer prediction; similar to VirB1, a protein that is a secreted hydrolase in the virB complex and other type IV secretion systems; found in a virB operon NP_435969.1 glimmer prediction; similar to hypothetical DNA binding protein (GI: 7480645) NP_435970.1 glimmer prediction, start codon changed based on codon usage pattern; global similarity to hydrolases, RdmC protein, and esterases (GI: 1864009; GI: 2127581); contains alpha/beta hydrolase fold used during synthesis of antibiotics in S. purpuras NP_435971.1 glimmer prediction; global similarity to MtbA integral inner membrane metabolite transport protein in B. japonicum; contains global domain homology to sugar transporters NP_435972.2 glimmer prediction; global similarity to proline dipeptidase (protease) (GI: 3372642) domain homology to metallopeptidase NP_435974.1 glimmer prediction; similar to conserved hypothetical protein in Rhizobium NGR234 (GI: 2496731) NP_435975.1 glimmer prediction; similar to a hypothetical protein in Rhizobium NGR 234 (GI: 2496730) YP_002000352.1 Contains helix-turn-helix binding motif, family membership NP_435977.2 glimmer prediction; similar to MalE, a sugar-binding protein found in the periplasm (GI: 2865459; GI: 2828820); subunit of ABC transporter; domain homology to bacterial extracellular solute binding protein found in sugar ABC transporter operon NP_435978.2 glimmer prediction; similar to inner membrane subunit of sugar ABC transporter; in malEFGK operon (GI:2828821) NP_435979.1 glimmer prediction; similarity to subunit of inner membrane protein of sugar ABC transporter; (GI: 2828821) in sugar ABC transporter operon NP_435980.1 glimmer prediction; similarity to ATPase subunit of sugar ABC transporter (GI: 4581012); found in cluster of ABC transporter subunits; second copy of gene found in adjacent ORF (SMA1345) NP_435981.1 glimmer prediction; similarity to ATPase subunit of sugar ABC transporter; found in cluster of ORFs encoding subunits of ABC tranporter; second copy of gene found in adjacent ORF (SMA1344) NP_435982.2 glimmer prediction; global similarity to D-3 phosphoglycerate dehydrogenases (GI:3122862) used during L-serine biosynthesis; global domain homology to D-isomer specific 2-hydroxyacid dehydrogenases NP_435983.1 glimmer prediction; similar to gntR family transcriptional regulators (GI: 7414556); N-terminal domain homology to gntR transcriptional regulator NP_435984.1 glimmer prediction; similarity to isomerase/racemase (GI:2851654); global domain homology to mandelate racemase / muconate lactonizing enzyme family NP_435985.1 glimmer prediction; global similarity to D-Tagatose 3-epimerase [Pseudomonas cichorii] (GI: 2804234); similar gene found in adjacent ORF (SMA1354) NP_435986.2 glimmer prediction; global similarity to D-Tagatose 3-epimerase (GI: 2804234); similar gene found in adjacent ORF (SMA1353) NP_435987.1 glimmer prediction; global similarity to hypothetical protein in B. subtilis (GI: 1731325) NP_435989.2 glimmer prediction; shows similarity to hypothetical protein in Rhodobacter (GI: 3128287) NP_435991.1 glimmer prediction; global homology to inner membrane permeases that are components of sugar transport systems (GI:6137042); C-terminal domain homology to binding-protein-dependent transport systems inner membrane component domain; other components of ABC transporters in adjacent ORFs NP_435992.1 glimmer prediction; global homology to sugar transport system integral membrane permease (GI:1913929); C-terminal domain homology to binding-protein-dependent transport systems inner membrane component domain; components of ABC transporters found in adjacent ORFs NP_435993.1 glimmer prediction; global homology to bacterial extracellular solute-binding protein domain; global homology to hypothetical extracellular solute binding-proteins YP_002000353.1 Has similarity to central region of S; meliloti SMa0473, which in turn has similarity to plasmid stabilization proteins NP_435994.1 glimmer prediction; global similarity to ATP-binding components of ABC-transporters (GI:1169417); adjacent ORFS contain components of ABC transporter NP_435995.2 glimmer prediction; similar to oxido-reductases (GI:1841491); global domain homology to short-chain NP_435997.1 glimmer prediction; global similarity to ATP- binding protein in oligopeptide ABC transporters (GI: 1168476); adjacent ORFs encode ABC transporter proteins; similar ATP-binding protein found in adjacent ORF (SMA1371); domain homology to ABC transporter NP_435998.1 glimmer prediction; global similarity to ATP-binding protein in oligopeptide ABC transporters (GI: 1168476); adjacent ORFs encode ABC transporter proteins; similar ATP-binding protein found in adjacent ORF (SMA1370); domain homology to ABC transporter NP_435999.1 glimmer prediction; shows global similarity to dipeptide transport system permease in E.coli (GI: 585067); found in a cluster of ABC transporter genes; Pfam domain homology to binding-protein dependent transport systems inner membrane component NP_436000.2 glimmer prediction; shows global similarity to oligopeptide transport system in B. subtilis (GI: 1168473); found in gene cluster encoding other components of ABC transporter NP_436001.2 glimmer prediction; global similarity to periplasmic binding proteins associated with ABC transporters (GI: 7471884); Pfam domain homology to bacterial extracellular solute-binding proteins, family 5 NP_436002.1 glimmer prediction; global similarity to enantiomer-selective amidase - Rhodococcus sp. (GI: 98837); global Pfam domain homology to amidase NP_436003.1 glimmer prediction; global homology to dipeptide binding transport protein (GI: 118906); Pfam global domain homology to bacterial extracellular solute-binding proteins; adjacent ORFs encode components of ABC transporters NP_436004.1 glimmer prediction; global similarity to YP_002000354.1 Weak similarity to a short region found in Fe-S- containing dehydrogenases NP_436005.2 glimmer prediction; similarity to in E.coli (GI: 45404) NP_436006.1 glimmer prediction; global homology to Ly NP_436007.1 glimmer prediction; global similarity to alpha-subunit of electron transfer flavoprotein (GI: 1706711) which serves as an electron acceptor for dehydrogenases; electron transfer flavoprotein beta subunit encoded in adjacent ORF (SMA1391) NP_436008.1 glimmer prediction; global similarity to electron transfer flavoprotein, beta-subunit (GI: 1706714) which serves as an electron acceptor for dehydrogenases; electron transfer flavoprotein alpha subunit encoded in adjacent ORF (SMA1389) NP_436009.1 glimmer prediction; global similarity to hypothetical protein in S. coelicolor (GI: 6714797) NP_436010.1 glimmer prediction; global similarity to hypothetical protein in s. coelicolor (GI: 6714798) NP_436011.1 catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis NP_436012.2 glimmer prediction; global similarity to fatty acid acyl-CoA (GI: 6465864) which uses FAD as a co-factor; Pfam domain homology to acyl-CoA NP_436013.1 glimmer prediction; global homology to L-fucose in Pseudomonas sp. and oxidoreductases (GI: 5881918, GI: 1073059) NP_436014.1 glimmer prediction; global similarity to hydroxypyruvate reductase in A. vitis (GI: 4033482) NP_436015.1 glimmer prediction; global similarity to 3-HYDROXYBUTYRYL-COA DEHYDRATASE in Clostridium acetobutylicum (GI: 1706153) which is involved in fatty acid metabolism; Pfam domain homology to Enoyl-CoA hydratase/isomerase NP_436016.1 glimmer prediction; global similarity to propionate CoA-transferase [Clostridium propionicum] (GI: 7242549), paralogue of chromosomal protein SMC4399 NP_436017.1 glimmer prediction; global similarity to probable aldehyde reductase (GI: 7427662) and 2,5-diketo-D-gluconic acid reductase (GI: 2127432); Pfam global domain homology to aldo/keto reductase NP_436018.1 glimmer prediction; very similar to SMA2275 of S. meliloti pSyma NP_436019.1 glimmer prediction; high global similarity NP_436020.1 glimmer prediction, start codon changed based on codon usage and homology; most similar to L-sorbosone dehydrogenases; probable succinate semialdehyde dehydrogenase; glimmer prediction; shows significant global identity to L-sorbosone dehydrogenase NAD(P) dependent [Gluconobacter oxydans] (GI: 1486252) and aldehyde dehydrogenase (GI: 2829486). Pfam global domain homology to aldehyde dehydrogenase NP_436021.1 glimmer prediction; shows global similarity to dehydrogenases; Pfam domain homology to zinc-binding dehydrogenases NP_436022.1 glimmer prediction; global similarity to ABC transporter permease (GI: 3025271); adjacent ORFs encoded ABC transporter proteins NP_436023.1 glimmer prediction; global similarity to ATP-binding component of ribose transport system in E.coli (GI: 1790190); Pfam domain homology to ABC transporter; adjacent ORFs encoded ABC transporter proteins NP_436024.2 glimmer prediction; global similarity to ribose transport protein RbsC in E.coli (GI: 147514); adjacent ORFs encoded ABC transporter proteins NP_436025.1 glimmer prediction; global similarity to D-allose periplasmic binding protein from E.coli (GI: 4558186); adjacent ORFs encode ABC transporter proteins; weak Pfam domain homology to periplasmic binding proteins NP_436026.1 glimmer prediction; Pfam N-terminal domain homology to tetR family of transcriptional activators; shows global similarity to transscription regulators NP_436027.2 glimmer prediction; similarity to oxidoreductase (GI: 6066668) NP_436029.1 glimmer prediction; global similarity to AgaD from A. tumefaciens, an agropinic acid permease (GI: 2665708); global similarity to hypothetical ABC transporter ATP-binding proteins (GI: 4062401); Pfam domain homology to ABC transporters NP_436030.1 glimmer prediction; global similarity to MoaC from A. tumefaciens, a mannopinic acid permease (GI: 2665714) and to DppC from E.coli, a dipeptide permease (GI: 349227); Pfam domain similarity to binding-protein-dependent transport systems inner membrane component; adjacent ORFs encode ABC transporters NP_436031.1 glimmer prediction; global similarity to oligopeptide transporter proteins (GI: 2126889); adjacent ORFs encode ABC transporters NP_436032.1 glimmer prediction; global similarity to DppA, a dipeptide-binding protein, in E.coli (GI: 1827807); Pfam domain similarity to bacterial extracellular solute-binding proteins; adjacent ORFs encode ABC transporter proteins NP_436033.1 catalyzes the formation of 2,5-dioxopentanoate from 5-dehydro-4-deoxy-D-glucarate NP_436034.1 glimmer prediction; global similarity to pyruvate complex repressor in E.coli (GI: 7428947); N-terminal Pfam domain similarity to the gntR family of bacterial regulatory proteins NP_436035.2 glimmer prediction; similar to dessication-associated protein in D. radiodurans NP_436036.2 glimmer prediction; global similarity to BenK, a benzoate transport protein in P. putida; Pfam domain homology to sugar and other transporters NP_436037.1 glimmer prediction; global similarity to PhaA, a thoiolase from P. putida (GI:1857942); global similarity to acetyl-CoA acetyltransferase from C. acetobutylicum and A. eutrophus (GI: 1174677); Pfam domain homology to thiolase NP_436038.1 glimmer prediction; global similarity to eukaryotic 3-hydroxyacyl-CoA type II (GI: 2569966); Pfam domain similarity to short chain NP_436039.2 glimmer prediction; global similarity to OruR from P. aeruginosa (GI: 1657970) which regulates ornithine utilization; Pfam domain similarity to N-terminal helix-turn-helix motif NP_436042.1 glimmer prediction; global similarity to malate-dehydrogenase from M. fervidus (GI: 80950) NP_436043.1 glimmer prediction; global similarity to muconate cycloisomerase in P. putida (GI: 77758); Pfam domain similarity to mandelate racemase / muconate lactonizing enzyme family NP_436044.1 glimmer prediction; global similarity to choline-binding protein precursor from B. subtilis (GI:7404430) and several ABC transporter proteins; adjacent ORFs encode other members of the choline transport system NP_436045.1 glimmer prediction; global similarity to CHOLINE TRANSPORT SYSTEM PERMEase OPUBB; adjacent ORFs encode other components of choline transport system; Pfam domain similarity to binding-protein-dependent transport systems inner membrane component NP_436046.1 glimmer prediction; global similarity to GLYCINE BETAINE/CARNITINE/CHOLINE TRANSPORT ATP-BINDING PROTEIN OPUCA; Pfam domain similarity to ABC transporters; adjacent ORFS encode components of the choline transport system NP_436047.1 glimmer prediction, start codon changed based on homolgy; global similarity to GLYCINE BETAINE/CARNITINE/CHOLINE TRANSPORT SYSTEM PERMEase OPUCB (GI: 7387982); adjacent ORFs encode other members of the choline transport system; Pfam domain homology to binding-protein-dependent transport systems inner membrane component NP_436049.1 glimmer prediction; C-terminus similar to aminopeptidase P from E.coli (GI: 4699533); Pfam C-terminal domain similarity to metallopeptidase NP_436050.2 glimmer prediction; global similarity to GlxA from S. meliloti (GI: 7387707); Ara-C like activator; Pfam domain similarity to C-terminal helix-turn-helix DNA binding domain NP_436051.1 glimmer prediction; global similarity to trimethylamine corrinoid protein methyltransferase MttB from M. thermophila (GI: 5052979) NP_436052.2 glimmer prediction; global similarity to GcvA, a glycine cleavage system transcriptional activator in E.coli (GI: 417043); LysR-type activator; global similarity to AmpR in other bacteria; Pfam domain homology to N-terminal helix-turn-helix DNA binding domain NP_436053.1 glimmer prediction; global similarity to eukaryotic dimethylglycine precursor protein (GI: 7019365); global similarity to eukaryotic sarcosine (GI: 4887168); Pfam domain homology to glycine cleavage T-proteins (aminomethyl transferase) which are part of the glycine cleavage multienzyme complex found in bacteria and in mitochondria of eukaryotes YP_002000355.1 Is similar to a group of conserved hypothetical proteins, but is lacking the carboxy-terminal approximately 50 amino acids found in this group of proteins NP_436054.2 glimmer prediction; global similarity to OpdE which regulates the imipenem-specific, outer membrane porin protein OprD in P. aeruginosa (GI: 444427). Also has similarity to transmembrane transport protein NP_436055.1 glimmer prediction; global similarity to membrane bound cytochrome C552 in the electron transport chain of P. denitrificans (GI:49209); Pfam domain homology to cytochrome c family NP_436056.1 glimmer prediction; global similarity to isoquinoline-1-oxidoreductase, beta subunit from B. diminuta (GI: 3334241) and aldehyde in Acetobacter (GI: 118508); Pfam domain similarity to aldehyde oxidase and xanthine dehydrogenase, C-terminus; adjacent subunit (SMA1491) encodes isoquinoline-1-oxidoreductase, alpha subunit NP_436057.2 glimmer prediction; global similarity to isoquinoline 1-oxidoreductase, alpha subunit from B. diminuta (GI: 3334240) and aldehyde subunit III from Acetobacter (GI: 2598223); adjacent ORF encodes isoquinoline-1-oxidoreductase beta subunit; Pfam global domain similarity to [2FE-2S] binding domain NP_436058.1 glimmer prediction; global similarity to LysR family transcription factors in the plant-pathogen X. fastidiosa (GI: 9106842); global similarity to transcriptional activator PtxR in P. aeruginosa (GI: 2501844); Pfam domain homology to N-terminal helix-turn-helix DNA binding domain NP_436060.1 glimmer prediction; global similarity to eukaryotic mitochondrial serine pyruvate aminotransferase (GI: 66655) and alanine glyoxylate aminotransferase (GI: 2239081); Pfam domain homology to aminotransferases--class V NP_436061.1 glimmer prediction; global similarity to GstA from R. leguminosarum which is a glutathione-S-transferase (GI: 1050750); Pfam global domain homology to Glutathione-S-transferases NP_436062.1 glimmer prediction; N-terminal similarity to oxygenase (PIR: T34570); Pfam N-terminal domain homology to Rieske [2Fe-2S] domain; C-terminal similarity to vanillate-o-demethylase oxidoreductase from Pseudomonas sp. (GI: 3915246) and the reductase-subunit of oxygenase from P. fluorescens (GI: 8346965); similar to SMA2117 of S. meliloti pSyma NP_436063.1 glimmer prediction; similar to SMA1503, SMA2119, SMA2121 and SMA2131 of S. meliloti pSyma NP_436064.1 glimmer prediction; similar to SMA1501, SMA2119, SMA2121 and SMA2131 of S. meliloti pSyma NP_436065.1 glimmer prediction; global similarity to UxuR, a regulatory protein in B. stearothermophilus (GI: 4056664); Pfam homology in N-terminal domain to bacterial regulatory proteins, GntR family NP_436066.1 glimmer prediction; global similarity to ORF2 in R. capsulatus (GI: 4581460) NP_436067.1 glimmer prediction; global similarity to galactoside transport ATP-binding protein MglA in E.coli (GI: 6166548); adjacent ORFs encode ATP transporters; Pfam domain homology to ABC transpoters NP_436068.1 glimmer prediction; global similarity to ribose ABC transporter permease (GI: 7451345); adjacent ORF encodes ribose transporter permease (SMA1514) NP_436069.1 glimmer prediction; global similarity to ribose ABC transporter permease, adjacent ORF encodes ribose ABC transporter (SMA1513) NP_436071.1 glimmer prediction; similar to NADH I CHAIN H (NADH-UBIQUINONE OXIDOREDUCTASE CHAIN H) [Mycobacterium tuberculosis] ACCESSION P95174 NP_436072.1 glimmer prediction; similar to CG3944 gene product [Drosophila melanogaster] ACCESSION AAF55234 NP_436073.1 glimmer prediction; similar to Smc01002 of S. meliloti chromosome NP_436074.1 (NADH-UBIQUINONE OXIDOREDUCTASE CHAIN G 2); glimmer prediction; identical to NADH I CHAIN G 2 (NADH-UBIQUINONE OXIDOREDUCTASE CHAIN G 2) [Sinorhizobium meliloti Strain 41] ACCESSION P56914, possibly in operon with NuoA2, NuoB2, NuoC2, NuoD2, NuoE2, NuoF2 NP_436075.1 (NADH-UBIQUINONE OXIDOREDUCTASE CHAIN F); glimmer prediction; identical to NADH I CHAIN F (NADH-UBIQUINONE OXIDOREDUCTASE CHAIN F 2) [Sinorhizobium meliloti Strain 41] ACCESSION P56913, possibly in operon with NuoA2, NuoB2, NuoC2, NuoD2, NuoE2, NuoG2 NP_436076.1 (NADH-UBIQUINONE OXIDOREDUCTASE CHAIN E 2); glimmer prediction; identical to NADH I CHAIN E 2 (NADH-UBIQUINONE OXIDOREDUCTASE CHAIN E 2) [Sinorhizobium meliloti Strain 41] ACCESSION P56910, possibly in operon with NuoA2, NuoB2, NuoC2, NuoD2, NuoF2, NuoG2 NP_436077.1 (NADH-UBIQUINONE OXIDOREDUCTASE CHAIN D 2); glimmer prediction; identical to NADH I CHAIN D 2 (NADH-UBIQUINONE OXIDOREDUCTASE CHAIN D 2) [Sinorhizobium meliloti Strain 41] ACCESSION P56908, possibly in operon with NuoA2, NuoB2, NuoC2, NuoE2, NuoF2, NuoG2 NP_436078.1 (NADH-UBIQUINONE OXIDOREDUCTASE CHAIN C 2); glimmer prediction; identical to NADH I CHAIN C 2 (NADH-UBIQUINONE OXIDOREDUCTASE CHAIN C 2) [Sinorhizobium meliloti Strain 41] ACCESSION P56896, possibly in operon with NuoA2, NuoB2, NuoD2, NuoE2, NuoF2, NuoG2 NP_436079.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen NP_436080.1 (NADH-UBIQUINONE OXIDOREDUCTASE CHAIN A 2); glimmer prediction; identical to NADH I CHAIN A 2 (NADH-UBIQUINONE OXIDOREDUCTASE CHAIN A 2) [Sinorhizobium meliloti Strain 41] ACCESSION P56895, possibly in operon with NuoB2, NuoC2, NuoD2, NuoE2, NuoF2, NuoG2 NP_436081.1 (NADH-UBIQUINONE OXIDOREDUCTASE CHAIN N 2); glimmer prediction; identical to C-terminus of NADH I CHAIN N 2 (NADH-UBIQUINONE OXIDOREDUCTASE CHAIN N 2) [Sinorhizobium meliloti Strain 41] ACCESSION P56911, note that glimmer has predicted a longer ORF than submitted by Putnoky et al., the longer ORF is of similar length to NuoN from R. capsulatus and NqoE from P. denitrificans NP_436082.1 glimmer prediction; similar to NADH I CHAIN M (NADH-UBIQUINONE OXIDOREDUCTASE CHAIN M) [Rhodobacter capsulatus] ACCESSION P50974, similar to NADH-Ubiquinone/plastoquinone (complex I), various chains NP_436083.4 subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; in S. meliloti it is known to be involved specifically with K+ transport NP_436085.1 subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone NP_436086.1 glimmer prediction; similar to NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NP_436087.2 glimmer prediction; similar to NADH (ubiquinone) (EC 1.6.5.3) chain 6 - Allomyces macrogynus mitochondrion ACCESSION S63655, similarity with NADH-ubiquinone/plastoquinone oxidoreductase chain 6 NP_436088.1 glimmer prediction; similar to PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 2(PROTEIN-BETA-ASPARTATE METHYLTRANSFERASE 2) (PIMT 2) (PROTEIN L-ISOASPARTYL METHYLTRANSFERASE 2) [Archaeoglobus fulgidus] (L-ISOASPARTYL PROTEIN CARBOXYLMETHYLTRANSFERASE 2) ACCESSION O27962 NP_436089.2 glimmer prediction; similar to HYPOTHETICAL 91.8 KD PROTEIN Y4LL [Rhizobium sp. NGR234] ACCESSION P55552, has PAC motif, PAS domain NP_436090.1 glimmer prediction; similar to FlcA [Azospirillum brasilense] ACCESSION CAA73019, regulatory protein, luxR family NP_436091.1 glimmer prediction; similar to CheR [Pseudomonas aeruginosa] ACCESSION BAA33556, and PROTEIN METHYLTRANSFERASE FRZF [Myxococcus xanthus] ACCESSION P31759, CheR methyltransferase, possibly in operon with ORFs SMA1554, SMA1556, SMA1558, SMA1561 NP_436092.1 glimmer prediction; CheW-like domain, possibly in operon with ORFs SMA1552, SMA1556, SMA1558, SMA1561 NP_436093.1 glimmer prediction; similar to PILJ PROTEIN [Pseudomonas aeruginosa] ACCESSION P42257, and FRZCD PROTEIN (FRIZZY AGGREGATION PROTEIN FRZCD) [Myxococcus xanthus] ACCESSION P43500, is a Methyl-accepting chemotaxis protein (MCP), possibly in operon with ORFs SMA1552, SMA1554, SMA1558, SMA1561 NP_436094.1 glimmer prediction; similar to chemotaxis histidine kinase [Campylobacter jejuni] ACCESSION CAB72751, and GLIDING MOTILITY REGULATORY PROTEIN [Myxococcus xanthus] ACCESSION P18769, possibly in operon with ORFs SMA1552, SMA1554, SMA1556, SMA1561 NP_436095.1 glimmer prediction; similar to chemotaxis protein CheB [Vibrio parahaemolyticus] ACCESSION AAF32418, has CheB methylesterase domain (glutamate), possibly in operon with ORFs SMA1552, SMA1554, SMA1556, SMA1558. More similar to CheB of Thermotogo maritima than to CheB1 of S. meliloti NP_436097.1 glimmer prediction; similar to unknown protein [Caulobacter crescentus] ACCESSION AAF40196, possibly in operon with ORFs SMA1569, SMA1568 NP_436098.1 glimmer prediction; highly similar to CpaF [Caulobacter crescentus] ACCESSION AAF40195, possibly in operon with SMA1569, SMA1564 NP_436099.1 glimmer prediction; similar to PilA [Caulobacter crescentus] ACCESSION AAF40189, pilin subunit, possibly in operon with ORFs SMA1568, SMA1564 NP_436101.1 glimmer prediction; similar to unknown protein [Caulobacter crescentus] ACCESSION AAF40194, Orf3 required for pilus assembly in Caulobacter, possibly in operon with ORFs SMA1578, SMA1576 NP_436102.1 glimmer prediction; similar to unknown protein [Caulobacter crescentus] ACCESSION AAF40191, Orf1 required for pilus assembly in Caulobacter, possibly in operon with ORFs SMA1578, SMA1573, paralogue of S. meliloti chromosomal protein SMC4112 NP_436103.1 glimmer prediction; similar to CpaA [Caulobacter crescentus] ACCESSION AAF40190, possibly in operon with ORFs SMA1576, SMA1573 NP_436104.2 glimmer prediction; slight similarity to C-terminal region of hypothetical protein H02F09.3 - Caenorhabditis elegans ACCESSION T33369 NP_436106.1 glimmer prediction; highly similar at N-terminus to hypothetical protein [Sinorhizobium meliloti strain CXM1-105] ACCESSION CAB38104 NP_436107.2 glimmer prediction; virtually identical to adenylate cyclase cya3 [Sinorhizobium meliloti strain CXM1-105] ACCESSION CAB38103, has TPR domain, note differences at amino acids 18, 180, 185, 198, 199, 253, and 555 NP_436109.1 glimmer prediction; identical to PROBABLE TRANSCRIPTIONAL REGULATOR SYRB2 from Sinorhizobium meliloti strain CXM1-105 ACCESSION Q9Z3Q1, RESPONSIBLE FOR THE REPRESSION OF SYRM ACTIVITY (BY SIMILARITY) NP_436110.1 glimmer prediction; identical to ENDO-1,3-1,4-BETA-GLYCANASE EGLC (SUCCINOGLYCAN BIOSYNTHESIS PROTEIN EGLC) from Sinorhizobium meliloti strain CXM1-105 ACCESSION Q9Z3Q2, note single difference at amino acid 52 NP_436112.1 glimmer prediction; similar to HYPOTHETICAL 112.7 KDA PROTEIN IN SUHR 5'REGION (ORFA) from Sinorhizobium meliloti strain 1021 ACCESSION Q52999, has adenylate and guanylate cyclase catalytic domain NP_436113.1 glimmer prediction; similar to probable iron-sulfur binding oxidoreductase - Streptomyces coelicolor ACCESSION T34689, similarity is only to C-terminus, this ORF may have a frameshift mutation and might compose a larger ORF with SMA1593 NP_436114.1 glimmer prediction; similar to probable iron-sulfur binding oxidoreductase - Streptomyces coelicolor ACCESSION T34689, similarity is only to N-terminus, this ORF may have a frameshift mutation and might compose a larger ORF with SMA1592 NP_436118.1 glimmer prediction; has KTN NAD-binding domain, similar to HYPOTHETICAL 59.4 KD PROTEIN IN GSK-FSR INTERGENIC REGION of E. coli ACCESSION P39830, has atypical codon usage NP_436119.2 glimmer prediction; similar to hypothetical transcriptional activator [Pseudomonas aeruginosa] ACCESSION AAD33772, bacterial regulatory helix-turn-helix protein, lysR family NP_436120.1 glimmer prediction; similar to GTN Reductase [Agrobacterium radiobacter] ACCESSION CAA74280, and morphinone reductase - Pseudomonas putida ACCESSION S64687, NADH:flavin oxidoreductase / NADH oxidase member NP_436121.1 glimmer prediction; similar to HYPOTHETICAL 36.3 KD PROTEIN YCF39 (ORF319) from Odontella sinensis ACCESSION P49534 NP_436123.1 glimmer prediction; similar to L0015 [Escherichia coli] ACCESSION AAC31494, and HYPOTHETICAL 61.7 KD PROTEIN Y4HP from Rhizobium sp. NGR234 ACCESSION P50360, possible frameshift at 5' end of this gene, may compose a larger ORF with SMA1612 NP_436124.1 glimmer prediction, similar to L0015 [Escherichia coli] ACCESSION AAC31494, possible frameshift at 3' end of gene, together with ORF SMA1610 may compose one larger ORF NP_436125.1 not predicted by glimmer; similar to hypothetical protein, 20.3K - Agrobacterium tumefaciens insertion sequence IS1131 ACCESSION JC1151, also L0014 [Escherichia coli] ACCESSION AAC31493 NP_436128.1 glimmer prediction; similar to INTEGRASE/RECOMBINASE Y4RA from Rhizobium sp. NGR234 ACCESSION P55634 NP_436129.1 glimmer prediction; similar to INTEGRASE/RECOMBINASE Y4RB from Rhizobium sp. NGR234 ACCESSION P55635 NP_436130.1 glimmer prediction; similar to INTEGRASE/RECOMBINASE Y4RC from Rhizobium sp. NGR234 ACCESSION P55636 NP_436132.1 glimmer prediction; similar to PnbR [Ralstonia pickettii] ACCESSION AAF01443, has H-T-H motif, slight similarity to NodD transcription activator C-terminus. Nearly identical to SMC00283 of S. meliloti chromosome. NP_436134.1 glimmer prediction; similar to oxidoreductase [Streptomyces coelicolor A3(2)] ACCESSION CAB58301, short chain YP_002000356.1 Detected by proteomics; Overlaps with SMa1630; No significant database similarity NP_436136.1 glimmer prediction; has H-T-H motif, similar to locus YCAN ECOLI, accession P75836 NP_436138.1 glimmer prediction; similar to hypothetical 44.0 KD protein from Rhizobium sp. NGR234 (ACCESSION P55642), possible frameshift at 3' end of this gene, may compose a larger ORF with SMA1637 NP_436141.2 glimmer prediction; similar to NreA from plasmid pTOM9 of Alcaligenes xylosoxidans strain 31A (ACCESSION AAA72440), possibly in an operon with SMA1641 NP_436142.1 glimmer prediction; highly similar to NreB from plasmid pTOM9 of Alcaligenes xylosoxidans strain 31A (ACCESSION AAA72441), possibly in an operon with SMA1639 YP_002000357.1 Contains 50 amino acid region with similarity to hemolysins NP_436145.2 glimmer prediction; ABC transporter similar to OppF from E. coli (ACCESSION P77737), operon with ORFs SMA1651, SMA1650, SMA1649, SMA647 NP_436146.1 glimmer prediction; ABC transporter similar to OppD from B. subtilis (ACCESSION P24136), operon with ORFs SMA1651, SMA1650, SMA1649, SMA646 NP_436147.1 glimmer prediction; binding-protein-dependent transport system protein, similar to NikC of E. coli (ACCESSION P33592), operon with ORFs SMA1651, SMA1650, SMA1647, SMA646 NP_436148.1 glimmer prediction; similar to YliC hypothetical ABC transporter permease from E. coli (ACCESSION P75798), operon with ORFs SMA1651, SMA1649, SMA1647, SMA646 NP_436149.1 glimmer prediction; member of extracellular solute binding protein family 5, similar to NikA from E. coli (ACCESSION P33590), operon with ORFs SMA1650, SMA1649, SMA1647, SMA646 NP_436150.1 glimmer prediction; similar to HyuE from Pseudomonas sp. strain NS671 (ACCESSION Q00924) NP_436151.1 glimmer prediction; similar to hypothetical protein aq_928 - Aquifex aeolicus ACCESSION D70380 NP_436152.1 glimmer prediction; possible GntR family bacterial regulatory protein, similar to probable transcription regulator - Streptomyces coelicolor ACCESSION T35007 NP_436155.1 glimmer prediction; similar to NrgA from B. japonicum (ACCESSION AAF03159), acetyltransferase NP_436156.1 glimmer prediction; similar to CeoB of B. cepacia (ACCESSION AAB58161), and AcrB of E. coli (ACCESSION P31224), possible operon with ORF SMA1664 NP_436157.1 glimmer prediction, start codon changed based on codon usage and homology; similar to AcrA from E. coli (ACCESSION P31223), HlyD family secretion protein, in possible operon with ORF SMA1662 NP_436159.1 glimmer prediction; similar to ArcD from Pseudomonas aeruginosa (ACCESSION P18275), see also ORF SMA1668, amino acid permease, in possible operon with ORFs SMA1668, SMA1670 NP_436160.1 glimmer prediction; similar to ArcD from Pseudomonas aeruginosa (ACCESSION P18275), see also ORF SMA1667, amino acid permease, in possible operon with ORFs SMA1667, SMA1670 NP_436161.1 catalyzes the degradation of arginine to citruline and ammonia NP_436162.2 glimmer prediction; similar to hypothetical protein - Synechocystis sp. (strain PCC 6803) ACCESSION S76927 NP_436165.2 glimmer prediction; similar to HYPOTHETICAL 37.5 KDA PROTEIN IN ASR-PNTB INTERGENIC REGION [Escherichia coli] ACCESSION P77535 NP_436166.2 glimmer prediction; prolidase NP_436169.1 glimmer prediction; high similarity to NapD from S. meliloti strain 104A14 (ACCESSION AAC05180) NP_436170.1 glimmer prediction; sulfatase, similar to ArsA from Homo sapiens (ACCESSION NP 000478) NP_436171.1 glimmer prediction, start codon changed based on codon usage; has histidine kinase domain, similar C-terminus to NwsA from Bradyrhizobium japonicum (ACCESSION S39901), similar C-terminus to NodV from B. japonicum, FixL from A. caulinodans, possible operon with response regulators SMA1686 and SMA1688, has atypical codon usage NP_436172.1 glimmer prediction; has response regulator receiver domain, similarity to luxR-family bacterial regulators, similar to StyR from Pseudomonas sp. strain Y2 (ACCESSION CAA03999), also similar to FixJ of Sinorhizobium meliloti and NwsB of Bradyrhizobium japonicum, possible operon with sensor kinase SMA1684 NP_436173.1 glimmer prediction; has response regulator receiver domain, possible operon with sensor kinase SMA1684 NP_436174.1 glimmer prediction; similar to TrkH from Vibrio alginolyticus (ACCESSION BAA31229), transmembrane potassium transporter YP_002000358.1 Has short region (about 40 amino acids) similar to pfam00654, Voltage_CLC, Voltage gated chloride channel NP_436177.1 glimmer prediction; has similarity to C-terminus of ExsG of Sinorhizobium meliloti strain 2011 (ACCESSION CAA12536). Nearly identical to SMA1001, also on S. meliloti pSyma NP_436178.1 glimmer prediction; similar to HYPOTHETICAL 21.8 KDA PROTEIN Y4AO [Rhizobium sp. NGR234] ACCESSION P55362 NP_436179.1 glimmer prediction; syrB11 identified by Barnett and Long, 1997 (ACCESSION O33685), [FUNCTION] RESPONSIBLE FOR THE REPRESSION OF SYRM ACTIVITY [SIMILARITY] BELONGS TO THE syrB11 FAMILY NP_436182.1 glimmer prediction; this is the same gene identified by Barnett and Long, 1997 (ACCESSION O33684) NP_436183.2 glimmer prediction; this is the same gene identified by Barnett and Long, 1997 (ACCESSION O33683), HYPOTHETICAL 50.8 KDA PROTEIN IN SYRB 5'REGION (ORF3), [SUBCELLULAR LOCATION] INTEGRAL MEMBRANE PROTEIN (POTENTIAL) NP_436184.1 glimmer prediction; this is the same gene identified by Barnett and Long, 1997 (ACCESSION O33682), but has 25 fewer N-terminal amino acids as predicted by glimmer, [SIMILARITY] BELONGS TO THE ROS / MUCR FAMILY. LACKS THE C2H3-TYPE ZINC-FINGER FOUND IN ALL MEMBERS OF THIS FAMILY NP_436187.1 glimmer prediction; arginase, similar to ARGINASE [similar to Bacillus caldovelox] ACCESSION P53608 NP_436188.1 glimmer prediction; probable adenine deaminase, similar to AdeC from Bacillus subtilis (ACCESSION S51115) NP_436189.2 glimmer prediction; similar to conserved hypothetical protein - Deinococcus radiodurans (strain R1) ACCESSION A75615. Some similarity to members of xanthine/uracil permease NP_436190.1 glimmer prediction; adenine deaminase, similar to AdeC from Bacillus subtilis (ACCESSION S51115) NP_436191.1 glimmer prediction, start codon changed based on codon usage and homology; HTH domain (N-terminal), similar to hypothetical transcriptional activator [Pseudomonas aeruginosa] ACCESSION AAD33772 NP_436193.2 glimmer prediction; isochorismatase, similar to conserved hypothetical protein yddQ - Bacillus subtilis ACCESSION G69776 NP_436194.2 glimmer prediction; similarity to AraC-family transcriptional regulators, similar to probable transcription regulator - Streptomyces coelicolor ACCESSION T35271 NP_436195.2 glimmer prediction; transcription factor, similarity with TetR-family transcriptional regulators, similar to REGULATORY PROTEIN BETI [Escherichia coli] ACCESSION P17446 NP_436196.1 glimmer prediction; similar to TpeS from Pseudomonas putida (ACCESSION P07383), alpha/beta hydrolase fold NP_436197.1 glimmer prediction; similar to HisX from Sinorhizobium meliloti strain Rm5000 (ACCESSION AAF78097) NP_436198.1 catalyzes the formation of betaine from betaine aldehyde NP_436200.2 glimmer prediction; similar to hypothetical protein - Synechocystis sp. (strain PCC 6803) ACCESSION S76674 NP_436201.1 glimmer prediction; ferredoxin, oxidoreductase, similar to Ferredoxin [2Fe-2S] I [Escherichia coli] ACCESSION BAA35586 NP_436202.1 glimmer prediction; HTH domain (N-terminal), similar to ORF286 protein [Pseudomonas stutzeri] ACCESSION CAA98154 NP_436203.1 glimmer prediction; similar to HYPOTHETICAL 36.9 KD PROTEIN IN LYSP-NFO INTERGENIC REGION [Escherichia coli] ACCESSION P33019 NP_436204.1 glimmer prediction; similar to probable iron-chelator utilization protein - Deinococcus radiodurans (strain R1) ACCESSION A75620, possibly in operon (iron uptake) with SMA1746, SMA1745, SMA1742, SMA1741 NP_436205.1 glimmer prediction; similar to IRP1D from Corynebacterium diphtheriae (ACCESSION AAD53128), ABC transporter possibly in operon (iron uptake) with SMA1746, SMA1745, SMA1742, SMA1740 NP_436206.1 glimmer prediction; similar to FecCD family, similar to IRP1C from Corynebacterium diphtheriae (ACCESSION AAD53127), possibly in operon (iron uptake) with SMA1746, SMA1745, SMA1741, SMA1740 NP_436207.1 glimmer prediction; similar to FecCD transport family, similar to ABC transporter IRP1B from Corynebacterium diphtheriae (ACCESSION AAD53126), possibly in operon (iron uptake) with SMA1746, SMA1742, SMA1741, SMA1740 NP_436208.2 glimmer prediction; similar to DtxR from Corynebacterium diptheriae (ACCESSION AAB97475), periplasmic binding protein, possibly in operon (iron uptake) with SMA1745, SMA1742, SMA1741, SMA1740 NP_436209.1 glimmer prediction; similar to FhuA from Salmonella paratyphi (ACCESSION CAA74395), has TonB dependent receptor C-terminal region NP_436210.1 glimmer prediction; similarity to AraC family transcriptional regulators NP_436213.2 glimmer prediction. LOCUS AAB67295 300 aa AttA2 [Agrobacterium tumefaciens]. ACCESSION AAB67295 NP_436214.1 glimmer prediction, start codon changed based on codon usage and homology. ABC Transporter. Similar to PotA from Actinobacillus actinomycetemcomitans NP_436215.1 glimmer prediction Similar to Agrobacterium motA NP_436216.1 glimmer prediction. Similar to Bradyrhizobium japonicum FixR NP_436217.1 glimmer prediction Similar to AtrA from Agrobacterium Agrobacterium tumefaciens NP_436219.1 glimmer prediction. similar to class III pyridoxal phosphate dependent aminotransferase NP_436220.1 glimmer prediction. similar to YIDB of ECOLI, HYPOTHETICAL 13.8 KD PROTEIN IN IBPA-GYRB INTERGENIC REGION. NP_436221.1 glimmer prediction. Similar to TAG1_ECOLI an 84 TRANSGLYCOSYLASE ASSOCIATED PROTEIN. ACCESSION P76011 NP_436224.1 glimmer prediction. Very small gene. Questionable ORF. Similar to Y4KP_RHISN 96 aa from Rhizobium sp. NGR234 NP_436227.1 glimmer prediction. Contains similarity to reductases NP_436228.1 glimmer prediction. Similar to AF114793_6 a 152 aa from Vitreoscilla sp. C1. ACCESSION AAD41046 NP_436229.1 glimmer prediction. Contains homology to helix turn helix of domain of bacterial transcriptional activators. LOCUS AAC61657 357 aa DNA binding protein HpkR [Pseudomonas syringae pv. syringae]. ACCESSION AAC61657 NP_436230.1 glimmer prediction. Very small protein but good codon usage NP_436231.1 glimmer prediction. Fairly bad codon usage NP_436232.2 glimmer prediction. Similar to hypothetical protein pXO1-120 - Bacillus anthracis virulence plasmid pXO1. ACCESSION H59105. NP_436233.1 glimmer prediction. Contains sequence identity to Adenylate and Guanylate cyclase catalytic domain. Similar to YSU5_RHIME 1029 aa HYPOTHETICAL 112.7 KDA PROTEIN IN SUHR 5'REGION (ORFA) of Rhizobium meliloti. ACCESSION Q52999. YP_002000359.1 Amino acids 1-36 of this protein are similar to amino acids 43-78 of S; meliloti SMb20912; Probable nonfunctional ORF fragment NP_436237.1 Similar to LOCUS KUP_ECOLI a 622 aa which encodes the KUP SYSTEM POTASSIUM UPTAKE PROTEIN. ACCESSION P30016. NP_436239.1 Identical (99%) to reverse transcriptase/maturase [Sinorhizobium meliloti]. ACCESSION CAA72334. NP_436242.1 glimmer prediction. Overlaps in opposite direction with SMA1807 NP_436243.2 glimmer prediction. Contains motif similar to similar to alpha/beta hydrolase fold. Strong homology to THCF_RHOER 274 aa NON-HEME HALOPEROXIDASE from Rhodococcus erythropolis. ACCESSION O05691. Note R. meliloti protein is approximately 40 amino acids smaller than most of the other oxidoreductases at the N-terminus. NP_436244.1 glimmer prediction. Similar to hypothetical protein SCJ21.11 - Streptomyces coelicolor. ACCESSION T37060. Similarity to B-lactamase motif. NP_436245.1 Similar to DitE from Pseudomonas abietaniphila, an aromatic-ring-hydroxylating dioxygenase. ACCESSION AAD21067 NP_436247.1 glimmer prediction. Similar to several other hypothetical proteins although protein is bigger than the others. Similar to conserved hypothetical protein ytcJ - Bacillus subtilis. ACCESSION F69989 NP_436249.2 glimmer prediction. Similar to the Chain A, The 1.8 Angstrom Crystal Structure Of The Ycac Gene Product From Escherichia Coli Reveals An Octameric Hydrolase Of Unknown Specificity. ACCESSION 4558196 NP_436250.2 glimmer prediction. Contains a helix turn helix motif. Similar to 288 aa regulatory protein GdhBR from Pantoea citrea. ACCESSION AAD16458 NP_436251.1 glimmer prediction. Contains helix turn helix motif. Similar to a 278 aa araC-family regulatory protein Streptomyces coelicolor. ACCESSION CAB88172 NP_436252.1 glimmer prediction. Contains a helix turn helix motif. C-terminus is similar to 278 aa araC-family regulatory protein Streptomyces coelicolor ACCESSION CAB88172 NP_436253.1 glimmer prediction. Poor codon usage. Similar to LOCUS 295 aa transcription regulator slr1871 - Synechocystis sp. (strain PCC 6803). ACCESSION S77111 NP_436254.1 glimmer prediction. Overlaps with ORF 1830 NP_436256.1 glimmer prediction. Similar to SNDH_ACELI 449 aa L-SORBOSONE (SNDH). ACCESSION Q44091. Similar to Smc04291 of S. meliloti chromosome NP_436257.2 glimmer prediction. Similar to T36604 a 288 aa hypothetical protein Streptomyces coelicolor. ACCESSION T36604. NP_436258.1 catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine NP_436259.2 glimmer prediction. Similar to YCDW_ECOLI 325 aa 2-HYDROXYACID IN PHOH-CSGG INTERGENIC REGION. ACCESSION P75913. Contains motif NP_436260.1 glimmer prediction. Similar to T28703 135 aa hypothetical protein - Streptomyces coelicolor.ACCESSION T28703. Some similarity to SMC1810 of S. meliloti chromosome NP_436261.1 glimmer prediction. Contains good similarity to aldehyde family. Similar to NP_010996 520 aa mitochondrial Aldehyde Dehydrogenase; Ald5p [Saccharomyces cerevisiae].ACCESSION NP_010996. May be an operon with SMA1846 and SMA1848 NP_436262.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis NP_436263.1 glimmer prediction. Strong similarity to LOCUS GABD_ECOLI 482 aa SUCCINATE-SEMIALDEHYDE [NADP+] (SSDH). ACCESSION P25526. Similar to Aldehyde family. May be in an operon with SMa1844 and SMa1846 NP_436264.1 glimmer prediction. Contains pyridine nucleotide dependent oxidoreductase motif. Similar to ORDL_HAEIN 431 aa PROBABLE OXIDOREDUCTASE ORDL. ACCESSION P44732 NP_436265.1 glimmer prediction. Contains a dehalogenase motif. Similar to LOCUS HAD1_PSEPU 227 aa 2-HALOALKANOIC ACID DEHALOGENASE (L-2-HALOACID DEHALOGENASE) (HALOCARBOXYLIC ACID HALIDOHYDROLASE). ACCESSION Q52087 NP_436266.1 glimmer prediction. Contains an acetyltransferase (GNAT) motif. Similar to T36604 288 aa hypothetical protein SCH24.39c - Streptomyces coelicolor. ACCESSION T36604 NP_436267.1 glimmer prediction. Contains similarity to Aminotransferases class-III pyridoxal-phosphate. Similar to Y4UB_RHISN 467 aa PROBABLE AMINOTRANSFERASE Y4UB. ACCESSION Q53196. Similarity ends in C-terminus of protein. SMA1855 is significantly longer than related ORFS NP_436268.1 glimmer prediction. Contains some similarity to haloacid dehalogenase-like hydrolase NP_436269.1 glimmer prediction. Contains a motif similar to Bacterial extracellular solute-binding proteins, family 5. Similar to (35% identity) to CAB01955 a 537 aa ORF23 [Sinorhizobium meliloti]. ACCESSION CAB01955. Could be part of an operon with SMa1862 SMa1863 and SMa1864 NP_436270.1 glimmer prediction. Contains motif similar to Binding-protein-dependent transport systems inner membrane component. Similar to S77573 334 aa oligopeptide transport protein homolog ophB - Agrobacterium tumefaciens plasmid pTiR10. ACCESSION S77573 NP_436271.1 glimmer prediction. Similar to Similar to S77574 270 aa oligopeptide transport protein homolog ophC - Agrobacterium tumefaciens plasmid pTiR10. ACCESSION S77574. Could be part of an operon with SMa1860 and SMa1862 NP_436272.1 glimmer prediction. Contains ABC transporter motif. Similar to probable peptidetransport system ABC-transporter ATP-binding protein - Mycobacterium tuberculosis (strain H37RV). ACCESSION H70788. Could be in an operon with SMa1860, SMa1862 and yA 1863 NP_436273.1 glimmer prediction. Contains a motif similar to AsnC family. Similar to LRP_KLEAE LEUCINE-RESPONSIVE REGULATORY Protein NP_436274.1 glimmer prediction. Similar to agaE [Agrobacterium tumefaciens]. ACCESSION AAB88469 NP_436275.2 glimmer prediction. Similar to C69066 339 aa ornithine cyclodeaminase - Methanobacterium thermoautotrophicum (strain Delta H). ACCESSION C69066 NP_436276.1 glimmer prediction. Contains motif similar to Pyridoxal-phosphate dependent enzymes. Similar to D72386 401 aa threonine dehydratase catabolic - Thermotoga maritima (strain MSB8). ACCESSION D72386 NP_436277.1 glimmer prediction. local similarity to integrase/recombinases. NP_436278.1 glimmer prediction. Contains a motif similar to Reverse transcriptase (RNA-dependent DNA polymerase)Similar to AAB86996 431 aa reverse transcriptase-like protein [Shigella flexneri]. ACCESSION AAB86996 NP_436279.1 glimmer prediction, local similarity to transposases, likely non-functional NP_436281.1 glimmer prediction. Similar to AE004024_1 205 a transcriptional regulator (AcrR family) [Xylella fastidiosa]. ACCESSION AAF84884. NP_436282.2 glimmer prediction. Contains motif similar to AcrB/AcrD/AcrF family. Similar to E004023_18 1020 aa cation efflux system protein [Xylella fastidiosa]. ACCESSION AAF84882. May be in an operon with SMa1885 NP_436283.1 glimmer prediction. Similar to E004023_19 368 aa component of multidrug efflux system [Xylella fastidiosa]. ACCESSION AAF84883. May be in an operon with SMa1884 NP_436284.1 glimmer prediction. Contains similarity to Bacterial regulatory proteins, tetR family. Similar to T37015 188 aa probable tetR-family transcription regulator - Streptomyces coelicolor. ACCESSION T37015 NP_436285.1 glimmer prediction. Contains similarity to Pyridine nucleotide-disulphide oxidoreductase. Similar to LOCUS TRXB_RICPR 310 aa THIOREDOXIN REDUCTASE (TRXR). ACCESSION Q9ZD97 NP_436286.1 glimmer prediction. Similar to TRXB_NEUCR 334 aa THIOREDOXIN REDUCTASE. ACCESSION P51978. May contain a frameshift and may be part of 1890 NP_436287.1 glimmer prediction. Contains similarity to Bacterial regulatory helix-turn-helix protein, lysR family. Similar to CAB61937 303 aa lysR-family trancsriptional regulator [Streptomyces coelicolor A3(2)]. ACCESSION CAB61937 NP_436288.1 this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress NP_436289.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress NP_436290.1 glimmer prediction. Similar to CAB61985 309 aa protein [Arabidopsis thaliana]. ACCESSION CAB61985 NP_436293.1 glimmer prediction. Contains similarity to motifs of Subtilase. Similar to LOCUS BAA35011 275 aa lytic enzyme L27 [Bacillus subtilis]. ACCESSION BAA35011 NP_436294.1 glimmer prediction. Contains a motif similar to Transglycosylase. Similar to LOCUS S76357 88aa penicillin-binding protein 1A - Synechocystis sp. (strain PCC 6803). ACCESSION S76357 NP_436297.2 glimmer prediction, start codon changed based on codon usage and homology. Good similarity to LOCUS S40541 363 a a antiporter affecting protein - Escherichia coli. ACCESSION S40541 NP_436298.1 glimmer prediction. LOCUS Y640_SYNY3 612 aa HYPOTHETICAL 66.7 KD PROTEIN SLL0640. Similar to proteins ly involved in sulfate uptake. 56% identical to Smc04179 of S. meliloti chromosome NP_436303.1 glimmer prediction. Similar to LOCUS Y4BK_RHISN 222 aa HYPOTHETICAL 24.3 KD PROTEIN Y4BK. ACCESSION P55378 NP_436304.1 glimmer prediction. Contains similarity to proteins for meta-pathway enzymmes required for degradation of phenol in comamonas testosteroni TA441. Similar to LOCUS BAA88506 326 aa orfJ [Comamonas testosteroni]. ACCESSION BAA88506 NP_436306.2 glimmer prediction. Contains similarity to bacterial regulatory helix-turn-helix protein, lysR family. Similar to AAC61657 357 aa DNA binding protein HpkR [Pseudomonas syringae pv. syringae]. ACCESSION AAC61657 NP_436307.1 stationary phase that binds TrpR repressor NP_436308.1 glimmer prediction. Similar to LOCUS AF157643_4 413 aa transporter protein [Mycobacterium smegmatis]. ACCESSION AAD46810 NP_436309.1 glimmer prediction. Contains a motif similar to Monooxygenase. Similar to LOCUS AAC64929 533 aa oxygenase [Streptomyces argillaceus]. ACCESSION AAC64929 NP_436310.1 glimmer prediction. Contains bacterial regulatory helix-turn-helix protein, lysR family. Similar to LOCUS AAC15509 299 aa positive transcriptional regulator [Pseudomonas fluorescens]. ACCESSION AAC15509 NP_436311.1 glimmer prediction. Contains a integral membrane domain. Similar to LOCUS BAA87718 294 aa Hypothetical gene [Agrobacterium tumefaciens]. ACCESSION BAA87718 NP_436312.1 glimmer prediction. LOCUS S75830 238 aa hypothetical protein sll1169 - Synechocystis sp. (strain PCC 6803). ACCESSION S75830 NP_436314.1 glimmer prediction. Contains a high degree of similarity to LOCUS BLAC_PROMI 298 aa BETA-LACTAMASE PRECURSOR (CARBENICILLINASE). ACCESSION P30897 NP_436315.1 glimmer prediction. Contains similarity to beta lactamase motifs. Similar to LOCUS AAD22974 279 aa extended-spectrum beta-lactamase variant Salmonella enteritidis serovar Saintpaul]. ACCESSION AAD22974. NP_436316.1 glimmer prediction. Contains motifs similar to bacterial regulatory helix-turn-helix protein, lysR family. Similar to LOCUS CAA07694 304 aa MexT protein [Pseudomonas aeruginosa]. ACCESSION CAA07694 NP_436317.2 glimmer prediction, start codon changed based on homology and codon usage. Contains motif similar to NodD transcription activator carboxyl terminal region. Similar to LOCUS CAA43667 301 aa SyrM [Sinorhizobium meliloti]. ACCESSION CAA43667 NP_436318.1 glimmer prediction. Similar to LOCUS S18542 294 aa hypothetical protein 4 - Streptomyces coelicolor. ACCESSION S18542. Some related ORFs have been reported to resemble hydroxylases NP_436319.2 glimmer prediction. Similar to LOCUS B65048 305 aa hypothetical protein b2681 - Escherichia coli (strain K-12). ACCESSION B65048 NP_436320.2 glimmer prediction. Contains motif similar to Protein of unknown function DUF24Similar to LOCUS YU95_MYCTU 158 HYPOTHETICAL 17.8 KDA PROTEIN RV3095. ACCESSION O05774 NP_436321.2 glimmer prediction. Similar to LOCUS PHA1_PSELE 414 aa POLY(3-HYDROXYALKANOATE) DEPOLYMERASE C PRECURSOR (PHA DEPOLYMERASE) (PHB DEPOLYMERASE). ACCESSION P52090 NP_436322.1 glimmer prediction. Similar to LOCUS C47127 271 aa tetracenomycin C synthesis protein tcmP - Streptomyces glaucescens. ACCESSION C47127 NP_436324.1 glimmer prediction. Contains a motif similar to Bacterial regulatory helix-turn-helix protein, lysR family. Similar to LOCUS AAC17939 342 aa GstR [Bradyrhizobium japonicum]. ACCESSION AAC17939 NP_436325.1 glimmer prediction. Contains similarity to short chain dehydrogenase/reductase C-terminus. Similar to LOCUS AAC23922 255 aa 2-hydroxycyclohexanecarboxyl-CoA dehyrogenase [Rhodopseudomonas palustris]. ACCESSION AAC23922 NP_436326.2 glimmer prediction, start codon changed based on homology and codon usage. Similar to LOCUS E003949_1 229 aa NonF-related protein [Xylella fastidiosa]. ACCESSION AAF83947 NP_436327.1 glimmer prediction. Similar to LOCUS F75512 261 aa conserved hypothetical protein - Deinococcus radiodurans (strainR1). ACCESSION F75512 NP_436328.1 glimmer prediction. Similar to LOCUS AAF41928 97 aa conserved hypothetical protein [Neisseria meningitidis MC58]. ACCESSION AAF41928 NP_436329.1 glimmer prediction. Similar to LOCUS CAB96550 328 aa D-oliose 4-ketoreductase [Streptomyces argillaceus]. ACCESSION CAB96550 NP_436330.1 glimmer prediction. Similar to LOCUS T04014 362 aa hypothetical protein F17A8.20 - Arabidopsis thaliana. ACCESSION T04014 NP_436331.2 glimmer prediction. Contains similarity to Class II Aldolase and Adducin N-terminal domain. Similar to LOCUS G71652 231 aa erythrocyte adducin alpha chain (addA) RP493 - Rickettsia prowazekii. ACCESSION G71652 NP_436332.2 glimmer prediction. Contains similarity to haloacid dehalogenase-like hydrolase. Similar to LOCUS DEH2_MORSP 224 aa HALOACETATE DEHALOGENASE H-2. ACCESSION Q01399 NP_436333.1 glimmer prediction. Contains motif similar to Bacterial regulatory helix-turn-helix protein, lysR family. Similar to LOCUS T34997 292 aa lysR-type transcription regulator - Streptomyces coelicolor. ACCESSION T34997 NP_436334.1 glimmer prediction, start codon changed based on codon usage. Low level similarity to LOCUS T35349 319 aa hypothetical protein SC5H1.33c - Streptomyces coelicolor. ACCESSION T35349 NP_436335.1 glimmer prediction. Contains similarity to Bacterial regulatory helix-turn-helix protein, lysR family. Similar to LOCUS F157493_17 303 aa transcriptional regulator [Zymomonas mobilis]. ACCESSION AAD42409 NP_436337.1 glimmer prediction. Similar to LOCUS AAC35818 114 aa HicB [Haemophilus influenzae]. ACCESSION AAC35818 NP_436338.2 glimmer prediction. Conserved in several Agrobacterium species. Similar to LOCUS AAD02335 214 aa arylesterase [Agrobacterium radiobacter]. ACCESSION AAD02335 NP_436339.1 glimmer prediction. Similar to LOCUS BAA97788 317 aa hypothetical ABC-transporter gene similar to teuC2 gene [Agrobacterium rhizogenes]. ACCESSION BAA97788 NP_436340.1 glimmer prediction. Similar to LOCUS BAA97787 320 aa hypothetical ABC-transporter gene similar to teuC1 gene [Agrobacterium rhizogenes]. SMA1995 is also similar to this protein. May be part of an operon. ACCESSION BAA97787 NP_436341.1 glimmer prediction. Similar to ABC transporter. Highly similar to LOCUS BAA97786 498 aa hypothetical ABC-transporter gene similar to teuA gene [Agrobacterium rhizogenes]. ACCESSION BAA97786 NP_436342.1 glimmer prediction, start codon changed based on homology. Similar to LOCUS BAA97785 343 aa hypothetical ABC-transporter gene similar to teuB gene [Agrobacterium rhizogenes]. ACCESSION BAA97785 NP_436343.1 glimmer prediction. Highly similar to LOCUS BAA97784 222 aa hypothetical protein [Agrobacterium rhizogenes]. ACCESSION BAA97784 NP_436344.1 glimmer prediction. Contains motif similar to ROK family (family of proteins with repressor, unknown ORF and kinase. Similar to LOCUS BAA97783 374 aa hypothetical repressor gene weakly similar to xylR gene[Agrobacterium rhizogenes]. ACCESSION BAA97783 NP_436345.1 glimmer prediction. Contains similarity to Bacterial regulatory proteins, tetR family. Similar to LOCUS E69779 198 aa transcription regulator TetR/AcrR family homolog ydeS - Bacillus subtilis. ACCESSION E69779 NP_436346.1 glimmer prediction. Similar to LOCUS Y887_MYCTU 152 aa HYPOTHETICAL 16.1 KDA PROTEIN RV0887C PRECURSOR. ACCESSION Q10548 NP_436349.1 glimmer prediction. Similar to LOCUS YCAN_ECOLI 302 aa HYPOTHETICAL TRANSCRIPTIONAL REGULATOR IN DMSC-PFLA INTERGENIC REGION. ACCESSION P75836 NP_436350.1 glimmer prediction. Bacterial regulatory helix-turn-helix protein, lysR family. LOCUS YCAN_ECOLI 302 aa HYPOTHETICAL TRANSCRIPTIONAL REGULATOR IN DMSC-PFLA INTERGENIC REGION. ACCESSION P75836 NP_436351.1 glimmer prediction. Contains motif similar to short chain dehydrogenase/reductase C-terminus. Similar to LOCUS CAB58301 257 aa oxidoreductase [Streptomyces coelicolor A3(2)]. ACCESSION CAB58301 NP_436352.1 glimmer prediction. Contains motif similar to MarR family. Similar to LOCUS CAA70318 145 aa hypothetical protein [Acinetobacter sp. ADP1]. ACCESSION CAA70318 NP_436353.2 glimmer prediction. Similar to LOCUS E003851_32 251 aa conserved hypothetical protein [Xylella fastidiosa]. ACCESSION AAF85601 NP_436354.2 glimmer prediction. Contains motif similar to GMC oxidoreductases. Similar to LOCUS BAA13145 531 aa L-sorbose dehydrogenase, FAD dependent [Gluconobacter oxydans]. ACCESSION BAA13145 NP_436355.1 glimmer prediction. Contains similarity to bacterial regulatory helix-turn-helix protein, lysR family. Similar to LOCUS AAC21675 312 aa transcriptional activator PtxR [Pseudomonas aeruginosa]. ACCESSION AAC21675 NP_436356.2 glimmer prediction. Contains similarity to Isochorismatase. Similar to LOCUS 4558196 208 aa Chain A, The 1.8 Angstrom Crystal Structure Of The Ycac Gene Product From Escherichia Coli Reveals An Octameric Hydrolase Of Unknown Specificity. ACCESSION 4558196 NP_436357.1 glimmer prediction. Local similarity to 278 aa NON-HEME CHLOROPEROXIDASE. Possible protein fragment. NP_436358.1 glimmer prediction. Local similarity to 278 aa NON-HEME CHLOROPEROXIDASE. Possible protein fragment. NP_436359.1 glimmer prediction. C-terminus is similar to LOCUS BAA19632 376 aa lytic transglycosylase [Actinobacillus actinomycetemcomitans]. ACCESSION BAA19632 NP_436360.1 glimmer prediction. Similar to C-terminus of LOCUS BAA19632 376 aa lytic transglycosylase [Actinobacillus actinomycetemcomitans]. ACCESSION BAA19632 NP_436361.2 glimmer prediction. Similar to motifs found in aldehyde oxidase and xanthine dehydrogenase, C terminus. Similar to LOCUS CAA05038 769 aa 4-Hydroxybenzoyl-CoA reductase alpha-subunit [Thauera aromatica]. ACCESSION CAA05038 YP_002000360.1 Belongs to the CoxS/CutC family of dehydrogenases, family membership NP_436365.1 glimmer prediction; similarity to IS30 family transposases NP_436367.1 glimmer prediction; similarity to eukaryotic C5,6 desaturases; motif similar to Pfam #PF01598, sterol desaturase; similar to Smc02017 on S. meliloti chromosome NP_436368.1 glimmer prediction; motif similar to Pfam #PF00355, Rieske [2Fe-2S] domain;similar to MocE of S. meliloti, genbank accession #AAD53004 NP_436373.1 glimmer prediction; weak local homology to ExsG histidine kinase NP_436374.1 glimmer prediction; similarity to Pfam #PF00072, response regulator receiver domain NP_436376.1 glimmer prediction; similar to Pfam # PF01100, prokaryotic sulphate- and thiosulphate-binding protein NP_436378.1 glimmer prediction; similar to Genbank accession #BAA94833 thermophilic dibenzothiophene desulfurization enzyme C NP_436379.1 glimmer prediction; similar to Pfam entry #PF00496, bacterial extracellular solute-binding proteins, family 5 NP_436385.1 glimmer prediction; similar to genbank accession #P54997 dibenzothiophene desulfurization enzyme B NP_436386.1 glimmer prediction; local similarity to Pfam entry # PF00441, acyl-CoA dehydrogenase. Adjacent hypothetical protein SMA2091 also has similarity to acyl-CoA dehydrogenases NP_436387.1 glimmer prediction; local similarity to acyl-CoA dehydrogenases; adjacent hypothetical protein, SMA2089 also has similarity to acyl-CoA dehydrogenases NP_436388.1 glimmer prediction; similar to sulfonate-binding proteins: genbank accession #P54997 dibenzothiophene desulfurization enzyme B, #P40400 aliphatic sulfonates binding protein precursor and #CAA88422 sulfate ester binding protein NP_436390.2 glimmer prediction; has motif similar to Pfam #PF01360, monooxygenase NP_436392.1 glimmer prediction; belongs to NtaA-SoxA family of monoxygenases, also similar to dibenzothiophene desulfurization enzyme A NP_436394.1 glimmer prediction; has local similarity, in C-terminus, to sulfite oxidase and nitrate reductase NP_436395.1 glimmer prediction; motif similar to Pfam entry #PF00126, bacterial regulatory helix-turn-helix protein, lysR family NP_436397.2 glimmer prediction; contains motifs similar to hemolysin-type calcium-binding proteins, Pfam entry #PF00353 NP_436398.1 glimmer prediction; similar to class III alcohol dehydrogenases NP_436399.1 glimmer prediction; similar to GstA of Rhizobium leguminosarum, Genbank accession Q52828, belongs to GST superfamily NP_436400.1 glimmer prediction; similar to Pfam entry #PF00355 Rieske [2Fe-2S] domain at amino acids 32-92; similar to Pfam entry #Pfam #PF00175, oxidoreductase FAD/NAD-binding domain at amino acids 382-479; similar to Pfam entry PF00111 2Fe-2S iron-sulfur cluster binding domains at amino acids 513-585; local similarity to VANILLATE O-DEMETHYLASE OXIDOREDUCTASE (aa 292-591) Genbank accession #005617; similar to SMA1500 of S. meliloti pSyma NP_436401.1 glimmer prediction; similar to SMA1501, SMA1503, SMA2121 and SMA2131 of S. meliloti pSyma NP_436402.1 glimmer prediction; similar to SMA1501, SMA1503, SMA2119 and SMA2131 of S. meliloti pSyma NP_436403.1 glimmer prediction; similarity to Pfam entry #PF01032 FecCD. The FecCD family is a sub-family of bacterial binding protein-dependent transport systems family NP_436404.1 glimmer prediction; similarity to Pfam entry #PF01032 FecCD. The FecCD family is a sub-family of bacterial binding protein-dependent transport systems family NP_436405.1 similarity to Pfam entry #PF00005, ABC transporter NP_436406.2 glimmer prediction; similarity to hypothetical protein AF0890 - Archaeoglobus fulgidus, Genbank accession #B69361 NP_436407.2 glimmer prediction; similar to SMA1501, SMA1503, SMA2119 and SMA2121 of S. meliloti pSyma NP_436408.1 glimmer prediction; local similarity to DNA-binding proteins. Similarity to Pfam entry #PF00165, HTH_AraC NP_436410.1 Involved in the metabolism of aromatic amino acids NP_436413.1 glimmer prediction, start codon changed based on homology; similar to MetF of Methylobacterium sp. strain CM4; similar to Pfam #PF02219, MTHFR, methylenetetrahydrofolate reductase NP_436414.1 glimmer prediction; similarity to Pfam #PF01571, glycine cleavage-T protein motif YP_002000361.1 similar to carboxy-termini of ParB-like nucleases, including RepB of Novosphingobium; May represent a truncated, nonfunctional ORF, because the overlapping SMa2147 has amino-terminal similarity to ParB-like nucleases NP_436415.1 glimmer prediction; weak similarity to Pfam #PF02195, ParB nuclease-like domain NP_436416.2 glimmer prediction; match to Pfam entry #PF01381 HTH_3, helix-turn-helix motif NP_436418.2 glimmer prediction predicted to be member of aldo/keto reductase NP_436421.2 glimmer prediction; local homology to transcription regulators; possible helix-turn-helix motif NP_436426.1 similar to integrase/recombinase Y4rC from Rhizobium sp. NGR234 NP_436427.1 similar to integrase/recombinase Y4rB from Rhizobium sp. NGR234 NP_436428.1 glimmer prediction; similarity to integrase/recombinase Y4rA from Rhizobium sp. NGR234 NP_436430.1 glimmer prediction; similar to agaE [Agrobacterium tumefaciens], gb|AAB88469. Weak similarity to pyridine nucleotide-disulphide oxidoreductase NP_436431.1 glimmer prediction; similar to amino acid and opine transporters, e.g., Agrobacterium tumefaciens P35117. ABC transporter family NP_436432.1 glimmer prediction; similar to permease AtrB from Streptomyces coelicolor, AAF25532; binding-protein-dependent transport system NP_436433.1 glimmer prediction; bacterial extracellular solute-binding protein, similar to Streptomyces coelicolor AtrA, AAF25531 NP_436434.1 glimmer prediction; some similarity to translation initiation inhibitors. similar to SMA2289 of S. meliloti pSyma. NP_436435.1 glimmer prediction; similar to transport protein PotC [Actinobacillus actinomycetemcomitans]: gb|AAC27497 NP_436436.2 glimmer prediction; similar to PotB permease for sperimidine and putrescine [E. coli]: P23860 NP_436437.1 glimmer prediction; similar to ABC-transporter AttA1 required for attachment to host cells and for virulence [Agrobacterium tumefaciens]: AAB67294 NP_436438.1 glimmer prediction; similar to predicted PotD protein from Agrobacterium rhizogenes, BAA97748 NP_436439.1 catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; also known as acetolactate synthase large subunit NP_436440.1 pfam00171, Aldehyde dehydrogenase; This family of dehydrogenases act on aldehyde substrates; Members use NADP as a cofactor; The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3; Succinate-semialdehyde dehydrogenase EC:1.2.1.16; Lactaldehyde dehydrogenase EC:1.2.1.22; Benzaldehyde dehydrogenase EC:1.2.1.28; Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27; Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9; Delta- 1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12; Acetaldehyde dehydrogenase EC:1.2.1.10; Glutamate-5- semialdehyde dehydrogenase EC:1.2.1.41; This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity, family membership NP_436441.1 glimmer prediction; histidine utilization repressor [Pseudomonas putida] P22773; gntR family of bacterial regulatory proteins NP_436442.2 glimmer prediction; similar to hypothetical protein P41655 [Methanobacterium thermoautotrophicum]; also similar to 4-hydroxybenzoate decarboxylase Ohb1 [Clostridium hydroxybenzoicum], AAD50377 NP_436443.1 glimmer prediction; very similar to VdcB decarboxylase [Streptomyces sp. D7] AAD28781 NP_436445.1 glimmer prediction; similar to D-nopaline dehydrogenase, Agrobacterium tumefaciens, S55578, and to opine oxidase subunit B, Sinorhizobium meliloti, P72299 NP_436446.1 glimmer prediction; similar to opine oxidase subunit A, Sinorhizobium meliloti AAB07523, and Agrobacterium tumefaciens, S55589 NP_436447.2 glimmer prediction; similar to histidine utilization repressor, Pseudomonas putida P22773; gntR family of bacterial regulatory proteins NP_436449.1 glimmer prediction; similar to hypothetical protein Rv1114, Mycobacterium tuberculosis, C70537 NP_436453.1 glimmer prediction; similar to hypothetical protein Rv2734, Mycobacterium tuberculosis, E70506 NP_436456.1 glimmer prediction; highly similar to Lactococcus lactis predicted coding region ORF00041 from 60 kb conjugative, bacteriocin-producing plasmid pMRC01; AAC56040 NP_436458.1 glimmer prediction; highly similar to hypothetical proteins Y4JO and Y4JP from Rhizobium sp. plasmid pNGR234a (two ORFS from pNGR234a are homologous to separate regions of SMA2249) NP_436459.1 glimmer prediction; highly similar to carboxy-terminal half of hypothetical protein Y4JO from Rhizobium sp. plasmid pNGR234a, T28642 NP_436460.1 glimmer prediction; similar to conserved hypothetical protein from Neisseria meningitidis, AAF42014, and from Synechocystis, S76031, S76368, and S75878 NP_436462.1 glimmer prediction; carboxyl-terminus weakly similar to integrase-like protein, Pseudomonas sp., X98999 NP_436467.2 glimmer prediction; similar to hypothetical protein SCJ9a.21 from Streptomyces coelicolor, T37157 NP_436471.1 glimmer prediction. Very similar to SMA1413 on S. meliloti pSyma NP_436477.2 glimmer prediction; similar to glycine cleavage system transcription activator, E. coli P32064; helix-turn-helix family of bacterial regulatory proteins; possible LysR family NP_436478.1 glimmer prediction; similar to chain A of B. subtilis Yabj, a purine regulatory protein; g6573365; some similarity to translation initiation inhibitors; similar to SMA2201 of S. meliloti pSyma NP_436479.1 glimmer prediction; similar to enoyl reductase in Streptomyces coelicolor, CAB82878, and to glycerol trinitrate reductase from Agrobacterium radiobacter, CAA74280 NP_436480.1 glimmer prediction; very similar to transcriptional activator AmpR from Hafnia alvei, AAF86690, and others such as Pseudomonas aeruginosa, S24954. Bacterial regulatory helix-turn-helix protein NP_436481.1 glimmer prediction; very similar to penicillin-binding-protein sequences, e.g. CAA15233, Rickettsia prowazekii. amino terminal domain belongs to transglycosylase; carboxyl terminal domain belongs to transpeptidase NP_436482.1 glimmer prediction; similar to penicillin binding protein B, e.g. from Caulobacter crescentus, AAF06836. amino terminal domain belongs to penicillin binding protein transpeptidase. NP_436485.1 glimmer prediction; carboxyl terminal 40% similar to multiple regulatory ORFs from Synechocystis, as well as to the response regulator CelR2 (involved in cellulose synthesis) from Rhizobium leguminosarum, AAD28578 NP_436486.1 glimmer prediction; ROK family; similar to several Streptomyces coelicolor trancriptional regulators, e.g. CAA19624, as well as to the xylose operon repressor XylR from Bacillus subtilis (P16557). Similar to Smc02017 of S. meliloti chromosome NP_436487.2 glimmer prediction; similar to SpcX from Streptomyces flavopersicus, AAD45548; extracellular solute-binding protein family NP_436488.1 glimmer prediction; similar to hypothetical transport proteins, e.g. Pyrococcus, A71065 NP_436489.1 glimmer prediction; similar to permease from Thermus sp. T2, CAB07809 NP_436490.1 glimmer prediction; very similar to multiple ATP-dependent transport proteins, e.g. SmoK from Rhodobacter sphaeroides, P54933, and Y40S from Rhizobium sp. NGR234, P55604; ABC transporter family NP_436491.1 glimmer prediction; amino terminal domain smilar to oxidoreductase from Streptomyces coelicolor, CAB61731; carboxyl terminal domain similar to StrT (ly involved in biosynthesis of 5'-hydroxystreptomycin), CAA7384 NP_436492.1 glimmer prediction; similar to streptomycin 3''-adenylyltransferase (AAD) from Staphylococcus aureus, P04827 NP_436493.1 glimmer prediction; similar to carboxyl domain of aminoglycoside adenylyltransferase AAD from Pseudomonas aeruginosa, AAD54217; continuation of preceding ORF SMA2315 NP_436494.2 glimmer prediction; glutatione S-transferase; similar to GstA from Pseudomonas syringae pv. tomato, AAF71510 NP_436495.1 glimmer prediction; similar to UvrD from Thermus thermophilus, BAA23380; UvrD/REP helicase NP_436497.1 glimmer prediction; very similar to transcription regulator KdpE from E. coli, P21866; amino terminus contains response regulator receiver domain; carboxyl terminus belongs to transcriptional regulatory protein family NP_436498.1 glimmer prediction; very similar to sensor protein KdpD (regulating potassium transport) in E. coli, P21865; carboxyl terminal contains histidine kinase domain NP_436499.1 One of the components of the high-affinity ATP-driven potassium transport (or KDP)system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex NP_436500.1 One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions NP_436501.1 catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions NP_436503.1 glimmer prediction; similar to signal transducer Irp8 from Yersinia enterocolitica, CAB46571 NP_436504.1 catalyzes the reversible formation of diaminobutyrate and 2-oxoglutarate from glutamate and L-aspartic beta-semialdehyde NP_436505.1 glimmer prediction; identical to L-2,4-diaminobutyrate decarboxylase, RhsB (RhbB), from Sinorhizobium meliloti, AAD09413; pyridoxal-dependent decarboxylase; rhizobactin siderophore biosynthesis family NP_436506.1 glimmer prediction; identical to RhsC (RhbC) from Sinorhizobium meliloti; Q9Z3R0, AAD09414 NP_436507.1 glimmer prediction; identical to RhsD (RhbD) from Sinorhizobium meliloti, Q9Z3Q9, AF110737 NP_436508.1 glimmer prediction; identical to RhsE (RhbE) from Sinorhizobium meliloti, Q9Z3Q8, AAD09416 NP_436509.1 glimmer prediction; identical to RhsF (RhbF) from Sinorhizobium meliloti, Q9Z3Q7, AAD09417 NP_436510.1 glimmer prediction; identical to RhrA from Sinorhizobium meliloti, Q9Z3Q6, AAD09418; predicted helix-turn-helix protein NP_436511.1 TonB-dependent siderophore receptor; glimmer prediction; identical to RhtA, rhizobactin receptor, from Sinorhizobium meliloti, Q9Z3Q5, AAD09419. Predicted TonB dependent receptor in C-terminal region NP_436512.1 glimmer prediction; similar to IucB, aerobactin siderophore biosynthesis protein from E. coli, Q47317, and from Shigella flexneri, AAD44747 NP_436513.2 glimmer prediction; similar to several transcriptional regulators, including Xylella fastidiosa, AAF84577; E. coli, P75836 and Pseudomonas aeruginosa, Q01610. Helix-turn-helix motif NP_436514.1 glimmer prediction; similar to oxidoreductases from Streptomyces coelicolor, CAB59579 and CAB58279, as well as to a hypothetical protein from Synechocystis, S76993; short-chain family YP_002000362.1 Predicted secreted protein with some similarity to ketosteroid isomerases YP_002000363.1 Carboxy-terminus is similar to a group of small conserved hypothetical proteins NP_436516.2 glimmer prediction; similar to Bacillus halodurans ORF, BAA75318 NP_436517.1 glimmer prediction; very similar to oxidoreductase from E. coli, P77165, and from Deinococcus radiodurans, B75576. 2Fe-2S binding domain. [2 Fe-2S] binding domain. May be one of three subunits of (SMA2349, SMA2351, SMA2353) NP_436518.1 glimmer prediction; very similar to E. coli YagS, a hypothetical protein, P77324; may be one of three subunits of (SMA2349, SMA2351, SMA2353) NP_436519.2 glimmer prediction; very similar to E. coli probable oxidoreductase (theoretical) YagR, P77489. Aldehyde oxidase and xanthine family. Possibly one of three subunits of (SMA2349, SMA2351, SMA2353) NP_436520.4 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function NP_436521.2 glimmer prediction; similar to adenylate cyclase from Anabaena sp., BAA14001. Adenylate and guanylate cyclase catalytic subunit family NP_436522.1 glimmer prediction; similar to hypothetical protein YtnM from Bacillus subtilis, F69997 NP_436523.1 glimmer prediction; similar to hypothetical protein AF0890 from Archaeoglobus flugidus, B69361 NP_436524.1 glimmer prediction; similar to 6-aminohexanoate-cyclic-dimer hydrolase from Deinococcus radiodurans, C75543. Amidase NP_436525.1 glimmer prediction; similar to probable ABC transporter YufO from Bacillus subtilis, D70009. ABC transporter family NP_436526.1 glimmer prediction; similar to permease from Archaeoglobus fulgidus, H69360, and others NP_436527.1 glimmer prediction; similar to permease from Archaeoglobus fulgidus, A69361 NP_436528.1 Catalyzes the deamination of cytosine to uracil and ammonia YP_002000364.1 Has weak similarity to the anti-Sigm factor, ChrR from Rhodobacter NP_436531.1 glimmer prediction; similar to chloramphenicol transporter in several organisms, including Salmonella typhimurium, AF118107, Klebsiella pneumoniae, AAF27726, and Enterobacter aerogenes, AAD22144 NP_436532.1 glimmer prediction; highly similar to catalase/peroxidase from Streptomyces reticuli, CAA74698 NP_436534.1 glimmer prediction; similar to TED2, a quinone oxidoreductase, from Zinnia elegans, BAA06460, and from cowpea, T11672; also similar to oxidoreductases from Mycobacterium tuberculosis, Agrobacterium tumifaciens, etc. Zinc-bindng family NP_436535.1 glimmer prediction; similar to probable ABC transporter from Streptomyces coelicolor, T35245, and to VarM (probable transporter for virginiamycin) from Streptomyces virginiae, BAA96297. ABC transporter family NP_436536.2 glimmer prediction; bacterial regulatory protein, tetR family NP_436537.2 glimmer prediction; very similar to Ohr, a stress-induced protein, from Bradyrhizobium japonicum, AAF78793 NP_436538.1 glimmer prediction; highly similar to replication protein C Y4cI from Rhizobium sp. NGR234, P55391, and to RepC from Rhizobium etli, AAB69098 NP_436539.2 glimmer prediction; similar to RepB protein from Agrobacterium tumefaciens plasmid pTiB6S3, B32812; to RepB from Rhizobium leguminosarum, S57969; and to RepB from Rhizobium etli, AAB69097 NP_436540.1 glimmer prediction; highly similar to RepA from Agrobacterium tumefaciens, BAA25270; also to RepA from Rhizobium leguminosarum, CAA61616; and from Rhizobium etli, AAB69096. ParA family ATPase NP_384107.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384108.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell NP_384109.1 AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate NP_384110.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis NP_384111.1 3'-5' exonuclease of DNA polymerase III NP_384112.1 molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA NP_384113.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384116.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384117.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384118.1 negatively supercoils closed circular double-stranded DNA NP_384120.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384121.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384127.1 Product confidence : Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology NP_384130.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384132.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384133.1 catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis NP_384134.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate NP_384135.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis NP_384136.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits NP_384137.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384138.1 Product confidence : probable; Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384139.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384141.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384143.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384145.1 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine NP_384148.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384149.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384150.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384151.1 PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP NP_384152.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384153.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384154.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384155.1 catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis NP_384156.1 catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis NP_384157.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase NP_384158.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide NP_384159.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide NP_384161.1 catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis NP_384162.1 heat shock protein involved in degradation of misfolded proteins NP_384163.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384164.1 heat shock protein involved in degradation of misfolded proteins NP_384167.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384168.1 catalyzes the formation of malate from glyoxylate and acetyl-CoA NP_384169.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384170.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384171.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384172.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384173.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384176.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384181.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384182.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384184.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Homology NP_384185.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384187.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate NP_384188.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by FrameD NP_384189.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384190.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384191.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384192.1 Product confidence : Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384193.1 Product confidence : Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384194.1 Product confidence : Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384195.1 Product confidence : Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384196.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384203.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384204.3 produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine NP_384212.2 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384213.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384214.1 catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate NP_384216.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384217.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384226.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384228.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384234.1 Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis NP_384235.1 catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation NP_384236.1 Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate NP_384237.1 Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate NP_384238.1 catalyzes the formation of inosine from adenosine NP_384239.1 catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose NP_384241.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384242.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384243.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384244.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384245.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384246.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384247.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384248.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384250.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384252.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384253.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384254.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384257.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384263.1 D-alanyl-D-alanine endopeptidase; functions in hydrolyzing cell wall peptidoglycan; similar to LAS metallopeptidases; forms a dimer in periplasm NP_384264.1 catalyzes the formation of methylglyoxal from glycerone phosphate NP_384265.1 catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate NP_384267.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis NP_384268.1 catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate NP_384269.1 Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384270.1 Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384271.1 Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384274.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384278.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384279.2 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384280.1 Involved in the metabolism of aromatic amino acids NP_384281.1 has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair NP_384283.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384284.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384286.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384288.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria NP_384289.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion NP_384292.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384293.1 Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384294.1 Required for DNA replication; binds preferentially to single-stranded, linear DNA NP_384295.1 ATP-dependent adenylate transferase, transfers adenyl moiety to the MoeD subunit of molybdopterin synthase NP_384305.1 catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway NP_384306.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384308.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384309.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384310.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384311.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384313.1 role in sulfur assimilation NP_384316.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress NP_384318.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384326.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384327.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids NP_384329.1 CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS NP_384330.1 catalyzes the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis NP_384336.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA NP_384337.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384339.1 involved in a recombinational process of DNA repair, independent of the recBC complex NP_384342.1 in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins NP_384343.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination NP_384344.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384345.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex NP_384346.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock NP_384347.1 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs NP_384349.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence NP_384350.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384351.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384352.1 Catalyzes a key regulatory step in fatty acid biosynthesis NP_384353.1 FabB, beta-Ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP NP_384354.1 catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP NP_384355.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384357.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by FrameD NP_384359.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis NP_384360.1 Catalyzes the formation of (d)CDP from ATP and (d)CMP NP_384361.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins NP_384365.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384368.2 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384369.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384370.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Homology; predicted by FrameD NP_384373.1 Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis, CTP for lipid synthesis, and GTP for protein elongation NP_384375.1 binds to the ribosome on the universally-conserved alpha-sarcin loop NP_384377.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384379.1 Product confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384380.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384381.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384382.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384383.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA NP_384384.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384386.2 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by FrameD NP_384387.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384388.1 IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits NP_384389.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384390.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit NP_384391.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily NP_384392.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily NP_384393.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384397.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384400.2 Product confidence : Gene name confidence : hypothetical; predicted by Codon_usage NP_384403.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384404.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides NP_384407.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384409.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384410.1 Product confidence : Gene name confidence : hypothetical; predicted by Codon_usage NP_384411.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384412.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384413.1 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate NP_384414.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384417.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by FrameD NP_384420.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway NP_384421.1 Enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine NP_384422.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384423.2 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384424.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_384425.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384428.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384429.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384430.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384431.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384432.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384433.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384434.1 BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters UDP disphosphate which reduces the pool of lipid carrier available to the cell NP_384438.1 OMP decarboxylase; OMPDCase; OMPdecase; type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase NP_384440.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384441.1 binds the polymerase to DNA and acts as a sliding clamp NP_384443.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384444.1 catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione NP_384445.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384446.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384449.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384451.1 catalyzes the formation of dUMP from dUTP NP_384452.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384457.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384458.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384459.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384460.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384461.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384463.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384464.1 catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine NP_384465.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384467.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384469.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384470.1 Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone NP_384471.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases NP_384472.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA NP_384473.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase NP_384474.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself. NP_384475.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384476.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384477.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384478.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384479.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III NP_384480.1 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine NP_384482.1 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs NP_384483.1 Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons NP_384484.1 with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor NP_384485.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384487.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen NP_384489.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384492.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control NP_384495.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384497.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis NP_384499.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384500.1 NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate NP_384501.1 This protein performs the mismatch recognition step during the DNA repair process NP_384502.1 catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein NP_384503.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384504.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384505.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA NP_384507.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384508.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384509.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384510.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384511.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A) NP_384512.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384513.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384514.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384515.1 Transfers the fatty acyl group on membrane lipoproteins NP_384516.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384517.1 methionine adenosyltransferase; catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase NP_384518.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine NP_384522.1 Product confidence : probable; Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384523.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384525.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+) NP_384526.1 modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth NP_384527.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability NP_384528.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384529.1 Product confidence : Gene name confidence : predicted by Homology; predicted by FrameD NP_384531.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica. NP_384532.1 Product confidence : probable; Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384533.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384536.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384537.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384539.3 catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway NP_384540.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384541.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384543.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384544.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384545.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate NP_384546.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384547.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384548.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384549.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential NP_384550.1 functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria NP_384551.1 protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates NP_384552.1 in Escherichia coli transcription of this gene is enhanced by polyamines NP_384553.1 Product confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384554.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384555.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384558.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384560.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384561.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384562.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384563.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384564.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384568.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384569.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384571.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384572.1 proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichia coli this protein self regulates transcription via a DNA-binding domain at the N-terminus but the protein from Pseudomonas does not have this domain NP_384573.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384574.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384577.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology NP_384579.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384580.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384585.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384586.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis NP_384587.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate NP_384588.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384589.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family NP_384590.1 activates fatty acids by binding to coenzyme A NP_384595.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384596.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384597.1 Product confidence : Gene name confidence : hypothetical; predicted by Homology NP_384600.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_384602.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Homology NP_384604.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by FrameD NP_384605.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384606.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_384607.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Homology NP_384608.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384610.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384611.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384613.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384614.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384617.1 Product confidence : probable; Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384618.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384619.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation NP_384620.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384621.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384623.1 DapATase; functions in arginine biosynthetic pathway; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine NP_384624.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation NP_384625.1 becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers NP_384626.1 protein associated with Co2+ and Mg2+ efflux NP_384627.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384628.1 catalyzes the conversion of O-succinylhomoserine and sulfide to homocysteine; second step in methionine biosynthesis NP_384629.1 Catalyzes the deamination of dCTP to form dUTP NP_384631.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384635.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384636.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384638.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384639.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation NP_384641.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384642.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384643.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384646.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384648.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384649.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384650.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384651.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384653.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384654.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384655.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors NP_384656.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384660.1 homopentamer; channel that opens in response to pressure or hypoosmotic shock NP_384661.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate NP_384662.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384663.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384664.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384665.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384666.2 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384673.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384675.1 part of the preprotein secretory system; forms a complex with protein YajC; SecDFyajC stimulates the proton motive force-driven protein translocation, seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF NP_384677.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384678.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384679.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384680.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384681.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384682.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384683.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384684.2 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384685.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384686.1 catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate NP_384695.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384696.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_384697.1 Product confidence : probable; Gene name confidence : predicted by Codon_usage; predicted by Homology NP_384698.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_384701.1 Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384702.1 Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384703.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384704.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384705.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384707.1 Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384708.1 Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384709.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384710.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384711.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384712.1 Product confidence : Gene name confidence : predicted by Homology NP_384715.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active NP_384717.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer NP_384718.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384720.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3 NP_384721.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell NP_384723.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Homology NP_384724.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Homology NP_384730.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384740.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384741.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384742.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384743.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384744.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384745.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384746.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384747.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384748.1 regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins NP_384749.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384750.1 catalyzes the conversion of glutamine residues to glutamate on methyl-accepting chemotaxis receptors NP_384751.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384752.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod NP_384755.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384756.1 membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export NP_384757.1 One of three proteins involved in switching the direction of the flagellar rotation NP_384758.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384759.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384760.1 With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine NP_384761.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384762.1 FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium have one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella NP_384763.1 involved in type III protein export during flagellum assembly NP_384764.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384765.1 with FlgF and C makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium have one thick flagellum and several thin flagella; the proteins in this cluster are associated with the thin flagella NP_384766.1 with FlgF and B makes up the proximal portion of the flagellar basal body rod NP_384767.1 forms a junction between the M-ring and FlgB during flagella biosynthesis; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella NP_384768.1 makes up the distal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagella NP_384769.1 required for the assembly of the flagellar basal body P-ring; Bradyrhizobium japonicum has two types of flagella, a single thick flagella and a few thin flagella; the protein in this cluster is associated with the thin flagella NP_384770.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum NP_384771.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384772.1 part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod NP_384773.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384774.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus NP_384775.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384776.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384777.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384778.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384779.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384780.1 with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine NP_384781.1 a periplasmic protein that interacts with and stabilizes MotB; in Rhizobium, interactions between MotB and MotC at the periplasmic surface of the motor control the energy flux or the energy coupling that drives flagellar rotation NP_384782.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384783.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384785.1 the hook connects flagellar basal body to the flagellar filament NP_384786.1 with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook NP_384787.1 with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thin flagella NP_384788.1 acts as an activator or flagellin translation and may be required for filament secretion or assembly; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella NP_384789.1 post-transcriptional repressor of flagellum biosynthesis; promotes degradation of fljK mRNA: Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella NP_384790.1 acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella NP_384791.1 FliQ, with proteins FliP and FliR, forms the core of the central channel in the flagella export apparatus; Bradyrhizobium have one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum NP_384792.1 membrane protein involved in the flagellar export apparatus NP_384793.1 FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus NP_384799.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate NP_384800.1 Product confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384801.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384802.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384803.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384804.1 Product confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384805.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384807.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384808.1 catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate NP_384809.1 catalyzes the formation of 6-phospho-D-gluconate from 6-phospho-D-glucono-1,5-lactone NP_384810.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate NP_384811.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384813.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384815.1 Product confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384818.1 Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates NP_384819.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384820.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384821.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384822.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384823.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384825.1 AcsA; in Sinorhizobium meliloti this enzyme is required for acetoacetate activation; similar to acetyl-CoA synthase NP_384826.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384828.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384832.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384833.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology NP_384834.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384835.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384836.1 rhizobial iron regulator; in Sinorhizobium meliloti mutations in this gene affect the expression of a number of iron-responsive operons NP_384837.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384838.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384839.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384840.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384841.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384842.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384845.1 in Caulobacter crescentus, CC3477 is differentially expressed in minimal salts media with glucose as compared to complex media NP_384850.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384851.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by FrameD NP_384859.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384860.1 Product confidence : Gene name confidence : hypothetical; predicted by FrameD NP_384861.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384862.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology NP_384865.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384866.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate NP_384868.1 Product confidence : Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology NP_384869.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384870.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384873.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384876.2 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384877.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase NP_384879.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384881.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384882.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384883.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384884.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384885.2 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384887.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384888.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384890.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384892.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG NP_384893.1 May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine NP_384894.1 short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ NP_384895.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384896.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384898.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is not essential for growth NP_384899.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring NP_384901.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384902.1 catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities NP_384903.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family; some organisms carry two different copies of this enzyme NP_384907.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384908.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384909.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384912.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384913.1 Product confidence : hypothetical; Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384916.1 catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A NP_384917.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384918.1 transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate NP_384919.1 Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384920.1 Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384922.1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex NP_384924.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384925.1 Product confidence : Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology NP_384926.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384928.1 catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate NP_384929.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384930.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate; functions in galactonate metabolism NP_384931.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384937.1 Product confidence : probable; Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384938.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384939.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384940.2 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384941.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0 NP_384942.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0 NP_384943.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B' is part of the membrane proton channel. NP_384944.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel. NP_384945.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids NP_384946.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384949.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384950.1 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis NP_384951.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384952.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384954.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384957.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA NP_384959.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384960.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384961.1 glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA NP_384962.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384964.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis NP_384965.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384967.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384970.1 UbiA prenyltransferase family catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin NP_384972.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384974.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384982.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA NP_384983.2 Product confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384985.2 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384986.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate NP_384987.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384988.1 catalyzes the bidirectional exonucleolytic cleavage of DNA NP_384989.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384991.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384993.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384994.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384997.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384998.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_384999.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385001.1 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate NP_385004.1 Catalyzes a key regulatory step in fatty acid biosynthesis NP_385005.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385007.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis NP_385008.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385010.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385011.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385012.1 converts protoheme IX and farnesyl diphosphate to heme O NP_385014.1 involved in the insertion of copper into subunit I of cytochrome C oxidase NP_385015.2 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385018.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway NP_385019.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine NP_385020.1 An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids NP_385021.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385023.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385024.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385025.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385027.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine NP_385029.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385030.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385031.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385032.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385034.1 Product confidence : probable; Gene name confidence : probable; predicted by Homology; predicted by FrameD NP_385035.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by FrameD NP_385036.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385037.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385038.1 catalyzes the formation of phosphoenolpyruvate from pyruvate NP_385044.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385048.1 may be GTPase that regulates ATP sulfurylase activity that is involved in converting ATP and sulfate to diphosphate and adenylylsulfate; in Escherichia coli this enzyme functions in cysteine biosynthesis in the first step; forms a heterodimer with CysD; part of the GTP-binding elongation factor family CysN/NodQ NP_385049.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP NP_385050.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385053.1 catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine NP_385054.1 catalyzes the formation of betaine from betaine aldehyde NP_385055.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385056.1 HTH-type; bet1; Repressor involved in choline regulation of the bet genes NP_385058.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385059.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385061.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385062.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385064.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385065.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology NP_385066.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology NP_385068.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385069.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385070.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385073.1 catalyzes the formation of (E)-3-(methoxycarbonyl)pent-2-enedioate and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and trans-aconitate NP_385074.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385077.2 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids NP_385078.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology NP_385079.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385082.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385083.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385086.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385087.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385088.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385090.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_385091.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385092.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385093.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385094.1 Product confidence : hypothetical; Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385095.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385097.2 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385098.1 subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+ NP_385099.1 subunit B of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in the case of S. meliloti it was proved to be involved specifically with K+ transport NP_385100.1 subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali NP_385101.1 subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; in S. meliloti it is known to be involved specifically with K+ transport NP_385102.1 subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport NP_385103.1 subunit F of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport NP_385104.1 subunit G of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport NP_385105.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385106.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385107.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385114.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_385115.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385116.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385117.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385120.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385121.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology NP_385122.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology NP_385123.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385124.1 CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane NP_385125.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385126.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385127.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385130.1 catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme NP_385132.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385133.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385137.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385139.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385143.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385144.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385148.1 Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile NP_385149.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385152.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385155.1 catalyzes the formation of histidinol phosphate and 2-oxoglutarate from glutamate and imidazole acetol-phosphate NP_385160.1 Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385161.1 Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385163.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385165.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis NP_385166.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation NP_385167.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385168.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology NP_385169.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385170.1 Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits NP_385171.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385176.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids NP_385177.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385178.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity NP_385179.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome NP_385180.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385181.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385183.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385184.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385185.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385186.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385188.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385189.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385193.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385194.3 involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA NP_385195.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385197.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385198.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385200.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate NP_385201.1 catalyzes the formation of oxaloacetate from L-aspartate NP_385202.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385203.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385204.1 Product confidence : Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology NP_385206.1 Product confidence : Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology NP_385207.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385209.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385210.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385214.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385215.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385217.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA NP_385221.2 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385222.1 catalyzes the formation of 2-isopropylmalate from 1-methyl-2-oxobutanoate and acetyl-CoA NP_385223.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385224.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385225.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385227.1 catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine NP_385228.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385230.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway NP_385231.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385232.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents NP_385233.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385235.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385237.1 unwinds double stranded DNA NP_385241.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk NP_385243.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit NP_385244.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21 NP_385245.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385247.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385248.1 catalyzes the formation of 3-hydroxyacyl-ACP from 3-keto-acyl-ACP; in the rhizobia this protein interacts with NodF to allow for the synthesis of highly polyunsaturated fatty acids necessary for nodulation NP_385249.1 carries the fatty acid chain in fatty acid biosynthesis NP_385250.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP NP_385251.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385252.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385253.1 Essential for recycling GMP and indirectly, cGMP NP_385255.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin NP_385256.1 catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate) NP_385258.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385259.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385260.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385261.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides NP_385262.1 binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB NP_385263.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385264.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385267.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385268.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology NP_385269.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385270.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate NP_385271.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385274.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385275.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385276.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385277.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision NP_385279.1 Product confidence : probable; Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385280.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385283.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385284.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385285.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385286.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385287.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385288.1 Product confidence : hypothetical; Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385289.1 glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate NP_385290.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis NP_385291.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385292.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385293.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate NP_385294.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385296.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385297.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385300.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes NP_385301.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385302.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; the rhizobia have multiple copies of the groEL gene which are active under different environmental conditions; the S. meliloti protein in this cluster is not associated with a groES gene NP_385303.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_385304.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_385305.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling NP_385306.1 Product confidence : Gene name confidence : hypothetical; predicted by Codon_usage NP_385308.1 Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate NP_385309.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_385310.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate NP_385311.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology NP_385313.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology NP_385314.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate NP_385315.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology NP_385316.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385317.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine NP_385318.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_385319.1 Product confidence : Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology NP_385320.1 Product confidence : Gene name confidence : hypothetical; predicted by Codon_usage NP_385321.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not NP_385322.1 Regulates rRNA biosynthesis by transcriptional antitermination NP_385324.1 pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient NP_385325.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology NP_385326.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_385327.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_385328.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY NP_385329.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs NP_385330.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control NP_385332.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_385333.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_385334.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_385336.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_385341.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_385343.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology NP_385344.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_385346.2 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis NP_385347.1 catalyzes the formation of putrescine from agmatine NP_385348.1 forms a direct contact with the tRNA during translation NP_385349.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit NP_385350.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_385351.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA NP_385352.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology NP_385353.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385354.1 catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol NP_385355.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385356.1 Product confidence : Gene name confidence : predicted by Homology NP_385357.2 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385359.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology NP_385360.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385361.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates NP_385362.1 binds and unfolds substrates as part of the ClpXP protease NP_385363.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385364.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385365.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385367.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385369.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385370.1 Catalyzes the transfer of electrons from NADH to quinone NP_385371.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen NP_385372.1 Catalyzes the transfer of electrons from NADH to quinone NP_385373.1 Catalyzes the transfer of electrons from NADH to quinone NP_385374.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385375.1 Catalyzes the transfer of electrons from NADH to quinone NP_385376.1 part of NADH-ubiquinone oxidoreductase complex I; shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase NP_385377.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385378.1 Catalyzes the transfer of electrons from NADH to quinone NP_385379.1 Catalyzes the transfer of electrons from NADH to quinone NP_385380.1 Catalyzes the transfer of electrons from NADH to quinone NP_385381.1 Catalyzes the transfer of electrons from NADH to quinone NP_385382.1 Catalyzes the transfer of electrons from NADH to quinone NP_385383.1 Catalyzes the transfer of electrons from NADH to ubiquinone NP_385384.1 Catalyzes the transfer of electrons from NADH to quinone NP_385385.1 Catalyzes the transfer of electrons from NADH to quinone NP_385386.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385387.2 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385388.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385390.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385391.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385392.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro) NP_385393.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385395.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase NP_385396.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385397.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function NP_385399.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385400.1 involved in swarmer-to-stalked cell differentiation in Caulobacter crescentus; catalyzes the condensation of two GTP molecules to form the secondary messenger cyclic di-GMP (c-di-GMP); upon phosphorylation of domain D1 the protein dimerizes; presumably this allows the two GTP-bound GGDEF (diguanylate cyclase) domains to catalyze the condensation reaction; allosterically inhibited by c-di-GMP NP_385401.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif NP_385404.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385405.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385406.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity NP_385407.1 Product confidence : hypothetical; Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385408.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX NP_385409.1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides NP_385410.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis NP_385411.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385412.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385415.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function NP_385416.1 catalyzes the opening and hydrolysis of the beta-lactam ring of beta-lactam antibiotics such as penicillins and cephalosporins NP_385417.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain NP_385418.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA NP_385420.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA NP_385422.2 Provides the input to the respiratory chain from the NAD-linked dehydrogenases of the citric acid cycle. The complex couples the oxidation of NADH and the reduction of ubiquinone, to the generation of a proton gradient which is then used for ATP synthesis NP_385424.1 leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys NP_385425.3 an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism NP_385426.1 composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism NP_385427.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis NP_385431.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385432.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385434.1 Product confidence : probable; Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385435.2 Product confidence : probable; Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385436.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385437.1 catalyzes the release of newly synthesized polypeptide chains at the stop codons UAA and UGA NP_385439.1 catalyzes the phosphorylation of NAD to NADP NP_385440.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Homology NP_385442.1 Product confidence : probable; Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385445.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu NP_385448.1 forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force NP_385449.1 Modulates Rho-dependent transcription termination NP_385450.1 binds directly to 23S ribosomal RNA NP_385451.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA NP_385452.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit NP_385453.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors NP_385454.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme NP_385455.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter NP_385457.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance NP_385458.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit NP_385459.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene NP_385460.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu NP_385461.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex NP_385462.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin NP_385463.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA NP_385464.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel NP_385465.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation NP_385466.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA NP_385467.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center NP_385468.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation NP_385469.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e NP_385470.1 one of the stabilizing components for the large ribosomal subunit NP_385471.1 primary binding protein; helps mediate assembly; involved in translation fidelity NP_385472.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase NP_385473.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel NP_385474.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13 NP_385475.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif NP_385476.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit NP_385477.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance NP_385478.1 binds 5S rRNA along with protein L5 and L25 NP_385479.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance NP_385480.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7 NP_385481.1 late assembly protein NP_385482.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase NP_385483.2 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP NP_385484.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA NP_385485.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3 NP_385486.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme NP_385487.1 is a component of the macrolide binding site in the peptidyl transferase center NP_385488.1 in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY; sulfite oxidase activity not demonstrated; contains heme NP_385489.1 in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ NP_385490.1 Product confidence : probable; Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385491.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385492.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385494.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385495.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385496.1 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling NP_385499.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385500.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385502.1 lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein NP_385503.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385504.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385505.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385508.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+) NP_385511.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385512.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385514.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385516.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by FrameD NP_385517.2 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385522.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385523.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385524.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385525.1 PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers NP_385526.1 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer NP_385527.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385528.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385531.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr) NP_385533.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385534.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385539.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling NP_385541.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385542.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385544.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate NP_385546.1 CTP synthase; CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer NP_385548.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis NP_385549.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis NP_385550.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385551.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385552.1 catalyzes the oxidative decarboxylation of pyruvate with concomitant acetylation of a lipoic acid-containing dihydrolipoamide acetyltransferase within the complex. The E1 component of the pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase(E2) and lipoamide dehydrogenase NP_385553.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385556.1 E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide NP_385558.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group NP_385559.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_385560.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385561.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385562.3 bifunctional enzyme involved in formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate and 2-C-methyl-D-erythritol 2,4-cyclodiphosphate and CMP from 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; binds divalent cations NP_385564.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385565.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385566.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385567.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385568.1 involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain NP_385569.1 catalyzes the transamination of D-amino acids and their alpha-keto acids NP_385570.2 Stimulates the elongation of poly(A) tails NP_385571.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385572.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385573.1 functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase Era NP_385574.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385575.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385579.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385580.1 Product confidence : hypothetical; Gene name confidence : predicted by Homology NP_385581.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385582.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385583.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385584.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385585.1 catalyzes the formation of L-homocysteine from cystathionine NP_385587.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385588.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385589.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385592.1 involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA NP_385593.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385596.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Homology; predicted by FrameD NP_385597.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385598.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385599.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385601.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit NP_385602.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu NP_385603.1 Catalyzes the phosphorylation of UMP to UDP NP_385604.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs NP_385605.1 catalyzes the formation of UDP pyrophosphate from isopentenyl pyrophosphate NP_385606.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385607.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385608.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385609.1 adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis NP_385610.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP NP_385611.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis NP_385612.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385613.1 catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM NP_385614.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385615.1 type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH NP_385616.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385617.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385618.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385620.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385622.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain NP_385624.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385625.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385626.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385627.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385628.1 dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate NP_385629.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase NP_385632.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385633.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385635.1 TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes NP_385636.1 mediates the export of protein precursors bearing twin-arginine signal peptides NP_385637.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385638.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA NP_385639.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate NP_385640.1 catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins NP_385641.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385642.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385643.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385645.1 part of the preprotein secretory system; forms a complex with protein YajC; SecDFyajC stimulates the proton motive force-driven protein translocation, seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF NP_385646.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385647.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385649.1 TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine NP_385652.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer NP_385653.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine NP_385654.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor NP_385655.1 catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein NP_385656.1 Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385658.1 Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385660.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385661.1 Catalyzes the rate-limiting step in dNTP synthesis NP_385662.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385663.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate NP_385664.1 binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA NP_385665.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385666.1 negatively supercoils closed circular double-stranded DNA NP_385670.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385673.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385675.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385676.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385677.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385678.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385679.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus NP_385682.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity NP_385684.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385686.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385688.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA NP_385689.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385690.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385691.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step NP_385692.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr) NP_385695.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385697.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385701.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385703.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385705.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385706.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385707.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content NP_385709.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA NP_385710.1 catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP) NP_385711.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385712.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by FrameD NP_385716.1 Represses a number of genes involved in the response to DNA damage NP_385717.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385725.1 CysK; forms a complex with serine acetyltransferase CysE; functions in cysteine biosynthesis NP_385726.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385727.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385730.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385732.1 periplasmic enzyme; functions during ribonucleic acid degradation; 2',3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate NP_385734.1 catalyzes the formation of 2-oxobutanoate from L-threonine; biosynthetic NP_385735.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385737.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385741.1 stationary phase that binds TrpR repressor NP_385742.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385743.1 catalyzes the conversion of guanine, xanthine and, to a lesser extent, hypoxanthine to GMP, XMP and IMP, respectively NP_385744.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385745.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385746.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385749.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385750.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385752.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385755.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385757.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385759.1 catalyzes branch migration in Holliday junction intermediates NP_385760.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385761.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385762.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source NP_385763.1 forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis NP_385764.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385765.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385766.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate NP_385767.1 involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water NP_385768.1 MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis NP_385769.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385771.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385773.2 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385777.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385778.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385780.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385781.1 Product confidence : Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385785.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by FrameD NP_385788.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_385791.1 Product confidence : probable; Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385795.1 activates fatty acids by binding to coenzyme A NP_385796.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation NP_385801.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385806.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385810.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385811.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385819.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385820.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_385821.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385823.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385824.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385825.1 Product confidence : probable; Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385827.1 Product confidence : probable; Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385828.1 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine NP_385831.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385832.1 Regulatory factor involved in maltose metabolism NP_385833.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn NP_385834.1 Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase NP_385835.1 catalyzes the conversion of NADPH to NADH NP_385836.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385837.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385839.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385841.1 with SufCD activates cysteine desulfurase SufS NP_385842.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385843.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385844.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling NP_385845.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr) NP_385847.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by FrameD NP_385848.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385849.2 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385850.2 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385851.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385854.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385855.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385856.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385857.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385858.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385861.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385862.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385865.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide NP_385867.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385868.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385870.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385871.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385872.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385873.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385874.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385876.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385878.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase NP_385879.1 With PurL and PurQ catalyzes the conversion of formylglycinamide ribonucleotide, ATP, and glutamine to formylglycinamidine ribonucleotide, ADP, and glutamate in the fourth step of the purine biosynthetic pathway NP_385880.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis NP_385885.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis NP_385886.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385887.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385890.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385891.1 TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs NP_385892.1 catalyzes the formation of glutamate from glutamine NP_385893.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination NP_385895.1 converts L-glutamate to D-glutamate, a component of peptidoglycan NP_385896.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385898.1 Converts isocitrate to alpha ketoglutarate NP_385900.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385904.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA NP_385905.2 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs NP_385906.1 Product confidence : Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology NP_385907.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385910.2 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385911.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385912.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385913.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385915.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by FrameD NP_385916.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology NP_385917.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385920.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385922.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385923.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385924.1 Product confidence : probable; Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385925.1 Product confidence : probable; Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385929.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385933.1 catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis NP_385935.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385936.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385937.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385939.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385940.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385943.1 NAD-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; does not decarboxylate oxaloacetate NP_385950.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385951.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385952.1 NH(3)-dependent; catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers NP_385953.1 predicted by Homology NP_385954.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385958.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_385959.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385960.1 catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense NP_385962.1 Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway NP_385963.1 catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate NP_385965.3 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle NP_385966.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385969.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385970.1 together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z NP_385971.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385972.1 in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis NP_385973.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385974.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385975.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by FrameD NP_385978.1 Product confidence : Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology NP_385979.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385982.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385986.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385987.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385989.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_385990.1 catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole NP_385991.1 catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole NP_385993.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386000.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386002.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386003.1 Product confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386004.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386006.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386007.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion NP_386009.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386010.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386011.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386016.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386018.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386019.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386020.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386021.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386024.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386025.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386026.1 Product confidence : Gene name confidence : predicted by Homology; predicted by FrameD NP_386031.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386038.1 catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate NP_386041.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386042.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386043.1 Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA NP_386045.1 FabF, beta-Ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP. NP_386046.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP NP_386048.3 Involved in the biosynthetic pathways of fatty acids, phospholipids, lipopolysaccharides, and oligosaccharides NP_386049.1 CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group NP_386050.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386051.1 responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid NP_386052.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386053.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386054.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386056.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386062.1 catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide NP_386063.1 with CobST catalyzes the formation of cobyrinic acid a,c-diamide from hydrogenobyrinic acid a,c-diamide in an ATP-dependent manner; involved in porphyrin and chlorophyll metabolism; vitamin B12 metabolism NP_386064.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386065.1 catalyzes ATP-dependent phosphorylation of adenosylcobinamide to form adenosylcobinamide phosphate and the addition of guanosine monophosphate to adenosylcobinamide phosphate to form adenosylcobinamide-GDP NP_386067.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by FrameD NP_386069.1 catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation NP_386077.1 catalyzes the formation of methionine from L-homocysteine and S-adenosyl-L-methionine NP_386079.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386080.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386082.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386083.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386084.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by FrameD NP_386088.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386092.1 catalyzes the transfer of the N5-methyl group from (6S)-methyl tetrahydrofolate to the cobalt center of a corrinoid iron-sulfur protein NP_386094.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Homology; predicted by FrameD NP_386096.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386101.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386103.2 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386107.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386108.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386109.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386112.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386119.1 Product confidence : Gene name confidence : hypothetical; predicted by Homology NP_386128.1 Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386129.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Homology NP_386137.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386145.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Homology NP_386146.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386147.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386153.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386154.2 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386156.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386157.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function NP_386159.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386160.1 Product confidence : probable; Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386161.1 Product confidence : probable; Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386162.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386163.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386164.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386165.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA NP_386166.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386167.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386170.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386172.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386174.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis NP_386179.1 Product confidence : Gene name confidence : hypothetical; predicted by FrameD NP_386181.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386184.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386185.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386188.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology NP_386189.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386190.2 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386192.1 involved in the de novo synthesis of pyridoxine (Vitamin B6) NP_386193.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_386194.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_386195.1 Product confidence : Gene name confidence : hypothetical; predicted by Codon_usage NP_386196.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_386197.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_386198.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_386199.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386200.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386201.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386202.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology NP_386203.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386204.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386205.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386206.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_386207.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_386208.1 Product confidence : probable; Gene name confidence : probable; predicted by Homology; predicted by FrameD NP_386209.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_386210.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_386211.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology NP_386212.1 Product confidence : probable; Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386213.1 Product confidence : probable; Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386214.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386215.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386216.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_386217.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386219.1 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit NP_386220.1 catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive NP_386221.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386222.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_386223.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_386224.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity NP_386225.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386227.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386228.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_386229.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386230.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by FrameD NP_386231.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386232.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386233.1 ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived NP_386234.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_386235.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_386236.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_386237.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology NP_386238.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_386239.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology NP_386240.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_386241.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_386242.1 Product confidence : probable; Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386243.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_386244.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386245.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_386248.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology NP_386249.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology NP_386250.1 Product confidence : probable; Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386252.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology NP_386253.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology NP_386254.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386255.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386256.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_386257.2 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386258.1 Product confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386259.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_386260.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386261.1 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype NP_386262.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Homology NP_386265.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386266.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386267.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate NP_386268.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine NP_386269.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386270.1 this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB NP_386271.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386272.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386273.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis NP_386274.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function NP_386275.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386276.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386277.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli NP_386278.1 porin involved in osmoregulation allowing water to move into and out of the cell in response to osmotic pressure NP_386280.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis NP_386281.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis NP_386282.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis NP_386283.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386284.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation NP_386285.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan NP_386286.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386287.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate NP_386288.1 Product confidence : probable; Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386290.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386291.1 MraZ; UPF0040; crystal structure shows similarity to AbrB NP_386293.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386295.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386296.1 catalyzes the formation of fructose 1,6-bisphosphate from fructose 6-phosphate and diphosphate NP_386298.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386304.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386305.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386307.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence NP_386309.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386310.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386311.1 catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; also known as acetolactate synthase large subunit NP_386312.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386313.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386314.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386316.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386319.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386321.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386322.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386326.1 Product confidence : Gene name confidence : hypothetical; predicted by Homology; predicted by FrameD NP_386327.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not NP_386329.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386330.1 Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386331.1 catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity NP_386332.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate NP_386334.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386335.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386337.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386338.1 in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane NP_386339.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386341.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386347.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386355.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386356.1 Converts (S)-3-hydroxyacyl-CoA to 3-oxyacyl-CoA; may also act as a thioesterase NP_386359.1 catalyzes the dehydration of L-carnitinyl-CoA to crotonobetainyl-CoA NP_386366.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386374.1 catalyzes the formation of 4-aminobutanoate from 4-aminobutanal; involved in putrescine degradation NP_386375.1 ferrioxamine B outer membrane protein; Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386377.1 ferric hydroxamate uptake periplasmic protein NP_386383.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386384.1 catalyzes the formation of methanethiol and 2-ocobutanoate from L-methionine NP_386385.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386387.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA NP_386391.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386393.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386394.1 Product confidence : probable; Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386398.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology NP_386399.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_386400.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Homology NP_386401.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_386402.1 Product confidence : Gene name confidence : hypothetical; predicted by Homology NP_386404.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology NP_386406.1 unwinds double stranded DNA NP_386408.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386413.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386416.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386417.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386419.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386420.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria NP_386421.1 converts threonine and NAD to 1,2-amino-3-oxobutanoate and NADH; functions in threonine catabolism NP_386422.1 catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine NP_386423.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386424.1 synthesizes RNA primers at the replication forks NP_386425.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386426.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers NP_386431.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate NP_386434.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386435.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386436.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386444.1 Product confidence : Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology NP_386445.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386446.1 catalyzes the formation of L-proline from pyrroline-5-carboxylate NP_386448.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386449.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein NP_386450.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386451.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386454.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP NP_386455.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386456.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386458.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386460.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response NP_386461.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation NP_386462.1 involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA NP_386463.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1 NP_386464.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386465.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386466.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis NP_386468.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386469.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386471.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386475.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386476.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386478.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386479.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386480.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386481.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386483.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386484.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386485.3 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386487.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386488.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates NP_386491.1 NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis NP_386492.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386493.1 trpE(G); catalyzes the formation of anthranilate from chorismate and glutamine; contains both component I and II NP_386496.2 catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate NP_386499.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386500.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386501.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386503.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386504.1 catalyzes the formation of thymidine 5'-phosphate from thymidine NP_386505.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386506.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386507.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386508.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD YP_002122345.1 frameshift NP_386509.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386510.1 catalyze the conversion of beta amino acids to the corresponding beta keto acid with pyruvate as the amine acceptor NP_386511.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386513.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386514.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386515.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386516.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386517.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386518.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386519.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386521.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by FrameD NP_386523.1 predicted by Codon_usage; predicted by Homology NP_386524.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386525.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386527.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_386534.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386535.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386536.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386537.1 with HmuTU is involved in the transport of hemin NP_386540.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386541.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription NP_386543.1 in Caulobacter crescentus, CC3477 is differentially expressed in minimal salts media with glucose as compared to complex media NP_386546.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386547.1 Converts D-sorbitol to L-sorbose NP_386548.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386549.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386550.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386551.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386552.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386553.1 function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain NP_386554.1 catalyzes the first step in pyrimidine degradation: the NADPH-dependent reduction of uracil and thymine to the corresponding 5,6-dihydropyrimidines NP_386557.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386559.1 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide NP_386560.1 catalyzes the hydrolytic cleavage of hydantoin with aromatic side chains at the 5'position NP_386561.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386563.2 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386566.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386569.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386570.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386571.1 involved in the assembly of the urease metallocenter; possible nickel donor NP_386572.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386573.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386574.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386575.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386576.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits NP_386578.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386579.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta); in Brucella suis the urease encoded by this operon (one of two urease-encoding operons found in its genome) is involved with urease activity, optimum growth, resistance to low-pH killing in-vitro and persistence in-vivo, while the other operon does not seem to be active NP_386580.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386581.1 UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter NP_386582.1 Product confidence : probable; Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386583.1 Involved in the metabolism of aromatic amino acids NP_386586.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386588.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386589.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386590.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386591.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386592.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386596.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386597.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386598.1 Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386599.1 Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386601.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386602.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386607.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386610.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386612.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386616.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386622.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386623.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386624.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386625.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386629.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386635.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386642.2 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386656.1 forms dimers and octamers; involved in conversion of glycerol to dihydroxy-acetone NP_386660.1 catalyzes the formation of D-fructose 6-phosphate from D-glucose 6-phosphate NP_386661.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386664.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386665.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386666.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386675.1 Product confidence : Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology NP_386676.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase NP_386681.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386682.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386683.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386684.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386686.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386687.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology NP_386688.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386694.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386698.1 Catalyzes the hydrolytic cleavage of a carbon-halogen bond in N-ethylammeline NP_386702.1 Catalyzes the deamination of cytosine to uracil and ammonia NP_386703.1 Catalyzes the hydrolytic cleavage of a carbon-halogen bond in N-ethylammeline NP_386707.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386708.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386711.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386712.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology NP_386713.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386714.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386715.2 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_386716.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386717.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2 NP_386718.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386719.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation. NP_386720.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386721.1 Involved in ubiquinone biosynthesis NP_386722.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_386724.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386725.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386726.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386727.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_386728.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage NP_386729.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386731.2 bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate NP_386733.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins NP_386735.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386739.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386741.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386743.1 this tRNA synthetase lacks the tRNA anticodon interaction domain; instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the first anticodon position of tRNAAsp; the modified tRNA does not bind elongation factor Tu NP_386747.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386748.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386749.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386750.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386751.1 converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA NP_386752.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386753.1 catalyzes the formation of arginine from (N-L-arginino)succinate NP_386755.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386757.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386759.2 Catalyzes the salvage synthesis of inosine-5'-monophosphate (IMP) and guanosine-5'-monophosphate (GMP) from the purine bases hypoxanthine and guanine, respectively NP_386765.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386767.1 dual function enzyme catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate and the formation of tyrosine from arogenate NP_386768.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis NP_386769.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386770.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386771.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386772.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386774.1 required for 70S ribosome assembly NP_386775.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386777.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386778.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386779.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386781.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386782.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis NP_386783.1 catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis NP_386785.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386786.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386787.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs NP_386788.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein NP_386789.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386790.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Homology; predicted by FrameD NP_386791.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386792.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386793.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386796.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386797.1 Product confidence : probable; Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386804.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386805.1 catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glutamate NP_386806.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386807.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386808.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386809.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386810.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386811.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386818.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by FrameD NP_386819.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs NP_386821.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386822.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386824.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386828.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386831.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386832.1 binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters NP_386833.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386834.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis NP_386835.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386836.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate NP_386837.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate NP_386840.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate NP_386841.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386842.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386843.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386844.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386845.1 forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA NP_386846.1 Product confidence : hypothetical; Gene name confidence : predicted by Codon_usage; predicted by FrameD NP_386847.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386848.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386849.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386850.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386851.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386852.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386853.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386854.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386855.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration NP_386856.1 plays an essential role in ATP-dependent branch migration of the Holliday junction NP_386857.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity NP_386859.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386860.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386861.1 Product confidence : probable; Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386862.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386863.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386864.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386868.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase NP_386869.1 catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate NP_386870.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386871.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway NP_386872.1 Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386873.1 Product confidence : probable; Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386874.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386875.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386880.1 RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome NP_386882.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386884.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386885.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386886.1 catalyzes the formation of thiamine monophosphate from 2-methyl-4-amino-5-hydroxymethylpyrimidine diphosphate and 4-methyl-5-(2-phosphono-oxyethyl)-thiazole NP_386888.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386891.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386892.1 With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway NP_386893.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif NP_386894.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386895.1 catalyzes the formation of phosphoenolpyruvate from pyruvate NP_386896.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386897.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386898.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386899.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386900.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386901.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386902.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386903.1 catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine NP_386905.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386906.1 Product confidence : probable; Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386907.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by FrameD NP_386909.2 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic NP_386910.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386911.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386913.1 Product confidence : probable; Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386915.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386916.2 glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate NP_386917.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386919.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386920.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386921.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386922.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386927.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386928.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386929.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386930.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386932.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386934.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis NP_386936.1 Product confidence : probable; Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386940.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386943.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386946.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386947.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386949.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386950.1 catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain NP_386951.1 catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate NP_386952.1 catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose NP_386953.1 catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate NP_386954.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386955.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386956.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386958.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386959.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386960.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386961.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386962.3 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA NP_386963.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386965.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386966.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386967.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386968.1 Product confidence : probable; Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386970.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386971.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386972.2 Catalyzes the reduction of hydroxypyruvate to form D-glycerate, using NADH as an electron donor NP_386973.1 Product confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386975.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386976.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386977.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386980.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386983.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386984.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386985.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386986.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386988.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386989.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386990.1 catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate NP_386991.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386993.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_386999.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387000.1 catalyzes the interconversion of D-xylose to D-xylulose NP_387001.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387008.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387009.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation NP_387010.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1 NP_387013.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387014.1 catalyzes the ATP-dependent formation of a phosphodiester at the site of a single strand break in duplex DNA NP_387015.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387016.1 subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+ NP_387017.1 subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali NP_387018.1 subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone NP_387019.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387020.1 subunit F of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport NP_387021.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387024.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387025.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387026.3 CobK/CbiJ; there are 2 pathways for cobalamin (vitamin B12) production, one aerobic (ex. P. denitrificans), the other anaerobic (ex. S. typhimurium); the CobK/CbiJ perform similar reactions in both; the anaerobic pathway includes the use of a chelated cobalt ion in order for ring contraction to occur; CobK thus converts precorrin 6 into dihydro-precorrin 6 while CbiJ converts cobalt-precorrin 6 into cobalt-deihydro-precorrin 6 NP_387027.1 catalyzes the formation of precorrin-4 from precorrin-3B and S-adenosyl-L-methionine NP_387028.1 catalyzes the formation of precorrin-3 from precorrin-2 NP_387029.1 catalyzes the interconversion of precorrin-8X and hydrogenobyrinate NP_387030.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387031.1 catalyzes the formation of precorrin 6x from precorrin 5 NP_387032.1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine NP_387033.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387034.1 part of ModCBA molybdate transporter; member of ABC superfamily; inner membrane component; regulated by repressor protein ModE NP_387035.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387038.1 Product confidence : probable; Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387039.1 Product confidence : probable; Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387040.1 Catalyzes the transfer of acetyl from acetyldihydrolipoamide to coenzyme A to form acetyl CoA NP_387041.1 E3 component of the branched-chain alpha-keto acid dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide NP_387042.1 produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine NP_387043.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387045.1 An oxygenase that acts to open the ring of homogentisate formingmaleylacetoacetate as part of the catabolism of L-tyrosine and L-phenylalanine NP_387049.1 Product confidence : Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology NP_387055.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387056.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387057.2 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387058.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387060.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387067.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387070.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387084.1 Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387085.1 Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387086.1 Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387087.1 one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity NP_387088.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387089.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387090.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387091.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387093.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387094.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate NP_387095.1 catalyzes the formation of 5-aminolevulinate from succinyl-CoA and glycine NP_387100.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387101.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387102.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387103.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387106.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387108.1 Product confidence : probable; Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387109.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387110.1 Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387111.1 Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387112.1 Product confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387113.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387114.1 involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth NP_387115.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387116.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387117.1 catalyzes the oxidation of formate to carbon dioxide and hydrogen using NAD or NADP as the acceptor NP_387120.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387121.1 in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane NP_387130.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387131.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387132.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387133.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387134.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387135.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387138.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387139.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane NP_387140.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit NP_387141.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit NP_387142.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit NP_387143.2 Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex NP_387145.2 binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity NP_387146.1 similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity NP_387148.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387151.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387152.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs NP_387154.1 Catalyzes the oxidation of dihydrolipoamide to lipoamide NP_387158.1 component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA NP_387159.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide NP_387160.1 Catalyzes the only substrate-level phosphorylation in the TCA cycle NP_387161.1 catalyzes the interconversion of succinyl-CoA and succinate NP_387162.1 Catalyzes the reversible oxidation of malate to oxaloacetate NP_387163.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387164.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387165.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387173.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387174.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387175.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase NP_387176.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol NP_387177.1 Product confidence : probable; Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387178.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387179.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Homology NP_387180.2 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387181.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Homology; predicted by FrameD NP_387182.1 unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity NP_387183.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate NP_387184.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity NP_387185.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis NP_387186.1 catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane NP_387188.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387190.1 Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group NP_387192.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387193.1 catalyzes the hydrolysis of pyrophosphate to phosphate NP_387195.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387196.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387199.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia NP_387202.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387203.1 Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387204.1 Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387209.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Homology; predicted by FrameD NP_387211.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387212.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis NP_387214.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology NP_387215.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387216.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387218.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387219.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387230.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387231.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387232.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387233.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology NP_387234.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387235.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387243.1 Product confidence : Gene name confidence : hypothetical; predicted by Homology NP_387244.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387246.1 Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387247.1 Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387249.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by FrameD NP_387250.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by FrameD NP_387251.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387252.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Homology; predicted by FrameD NP_387253.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by FrameD NP_387255.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387256.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by FrameD NP_387257.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by FrameD NP_387258.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology NP_387261.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387262.1 involved in the peptidyltransferase reaction during translation NP_387263.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387264.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387265.3 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication NP_387266.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis NP_387267.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway NP_387268.2 transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria NP_387269.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387270.2 SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA NP_387271.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387272.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387273.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387274.1 hydrolyzes diadenosine polyphosphate NP_387275.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387277.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387278.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387280.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387282.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387284.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D NP_387286.1 catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis NP_387287.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387288.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387289.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387292.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387294.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387295.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387296.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387297.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387307.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387308.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387310.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387311.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387312.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate NP_387315.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming NP_387319.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387323.1 4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction NP_387324.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387325.2 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387327.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387328.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387330.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates NP_387334.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387335.1 Catalyzes the conversion of citrate to isocitrate NP_387336.1 ATP-binding protein; required for proper cytochrome c maturation NP_387337.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387338.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387339.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by FrameD NP_387340.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387342.1 Involved in cell division; probably involved in intracellular septation NP_387343.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387344.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387345.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate NP_387346.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387347.1 catalyzes the interconversion of chorismate to prephenate NP_387348.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity NP_387349.1 Essential for efficient processing of 16S rRNA NP_387350.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA NP_387351.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387352.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site NP_387357.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387358.1 part of the thiamine and TPP transport system tbpA-thiPQ NP_387359.1 permease; with TbpA and ThiQ functions in transport of thiamine and thiamine pyrophosphate into the cell; repressed in presence of exogenous thiamine NP_387361.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387362.2 binds with the catalytic core of RNA polymerase to produce the holoenzyme; sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma-32 is responsible for the expression of heat shock promoters; there are paralogs in Rhizobium and Sinorhizobium; the proteins in this cluster act as secondary heat shock sigma factors; the Rhizobium sigma-32 factor may also be involved in exopolysaccharide production NP_387363.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387365.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387366.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387367.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387368.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis NP_387369.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387370.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not NP_387371.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387372.1 glycosyltransferase; polymerizes glycan strands in the peptidoglycan NP_387373.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387374.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis NP_387375.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387377.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis NP_387381.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387384.1 biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate NP_387386.1 Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387387.1 Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387388.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387389.1 responsible for transport of beta-1,2-glucans from the cytoplasm to periplasm; inner membrane ABC transporter permease component; Cgt; ChvA; NdvA NP_387392.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387394.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387397.1 predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387399.1 catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate NP_387400.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387402.1 catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis NP_387413.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387414.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387416.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis NP_387417.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387422.1 catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde NP_387424.1 Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387425.1 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal NP_387426.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387428.1 involved in de novo purine biosynthesis NP_387430.2 Product confidence : hypothetical; Gene name confidence : predicted by Codon_usage; predicted by FrameD NP_387431.1 metalloprotease NP_387432.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387433.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA NP_387434.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387436.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387437.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase NP_387439.1 required for the assembly and function of the DNAX complex which are required for the assembly of the beta subunit onto primed DNA NP_387440.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387441.1 Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387442.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA NP_387443.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs NP_387444.2 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE NP_387445.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes NP_387446.1 Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD NP_387447.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III NP_436541.1 Product confidence : probable; Gene name confidence : probable NP_436542.1 Product confidence : probable; Gene name confidence : probable NP_436543.1 Product confidence : probable; Gene name confidence : probable NP_436544.1 Product confidence : probable; Gene name confidence : probable NP_436545.1 Product confidence : probable; Gene name confidence : NP_436546.1 catalyzes the formation of L-proline from pyrroline-5-carboxylate NP_436547.1 Product confidence : Gene name confidence : NP_436548.1 Product confidence : Gene name confidence : NP_436549.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436550.1 Product confidence : probable; Gene name confidence : NP_436551.1 catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA; in mycobacteria LigC has weak intrinsic nick joining activities and is not essential for growth NP_436553.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436554.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436555.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436556.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436562.1 Product confidence : Gene name confidence : NP_436563.1 Product confidence : Gene name confidence : NP_436565.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436566.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436568.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436569.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436570.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436571.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436572.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436573.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription NP_436574.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436575.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436576.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436578.1 Product confidence : probable; Gene name confidence : hypothetical NP_436580.1 AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate NP_436581.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436583.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436584.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436585.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436586.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436587.1 Product confidence : probable; Gene name confidence : probable NP_436588.1 Product confidence : probable; Gene name confidence : probable NP_436589.1 Product confidence : probable; Gene name confidence : probable NP_436590.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436592.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene NP_436593.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436594.1 Product confidence : Gene name confidence : NP_436600.1 Product confidence : probable; Gene name confidence : NP_436601.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436602.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436603.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436604.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436605.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436606.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436607.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436608.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436614.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436615.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436621.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436622.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436623.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436625.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436626.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436627.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436628.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436629.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436630.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436631.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436632.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436633.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436636.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436637.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436638.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436641.1 catalyzed the formation of 2-ketoglutarate from 2-hydroxyglutarate NP_436642.1 Product confidence : Gene name confidence : NP_436644.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436647.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436652.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436654.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436655.1 catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate NP_436656.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436657.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436658.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436659.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436661.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436662.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436667.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436672.1 Product confidence : probable; Gene name confidence : hypothetical NP_436673.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436676.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436677.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436678.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436679.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436680.1 Product confidence : Gene name confidence : NP_436685.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436686.1 Product confidence : Gene name confidence : NP_436689.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436692.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436693.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436697.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436701.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436703.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436705.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436706.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436707.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436708.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436709.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436710.1 Product confidence : probable; Gene name confidence : probable NP_436716.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436717.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436718.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436719.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436720.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436726.1 catalyzes the reaction of formaldehyde with glutathione to form S-hydroxymethylglutathione NP_436727.2 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436728.1 Product confidence : Gene name confidence : NP_436729.1 Product confidence : probable; Gene name confidence : NP_436730.1 Product confidence : Gene name confidence : NP_436731.1 type III RuBisCO; involved in carbon fixation NP_436732.1 class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis NP_436733.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase NP_436734.1 Product confidence : Gene name confidence : NP_436735.1 catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate NP_436736.1 Product confidence : probable; Gene name confidence : NP_436737.1 Required for coenzyme pyrroloquinoline quinone (PQQ) biosynthesis; probably provides the glutamate and tyrosine residues that are cross-linked and modified to form the coenzyme NP_436738.1 possibly involved in transport of pyrroloquinoline quinone transport NP_436739.1 Required in the synthesis of PPQ, but its exact function is unknown NP_436740.1 Product confidence : Gene name confidence : NP_436741.1 Product confidence : probable; Gene name confidence : NP_436742.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436745.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436746.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436750.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436754.2 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436756.1 Product confidence : probable; Gene name confidence : NP_436757.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436758.1 Product confidence : probable; Gene name confidence : NP_436759.1 Product confidence : Gene name confidence : NP_436760.1 Product confidence : probable; Gene name confidence : NP_436761.1 Product confidence : probable; Gene name confidence : NP_436765.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436767.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436769.1 Product confidence : Gene name confidence : NP_436774.1 Product confidence : Gene name confidence : NP_436778.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436780.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436781.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436782.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436783.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436784.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436786.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436790.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436799.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436801.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436803.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436804.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436805.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436807.1 Product confidence : probable; Gene name confidence : hypothetical NP_436808.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436809.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436810.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436811.1 Product confidence : probable; Gene name confidence : NP_436812.1 Product confidence : probable; Gene name confidence : NP_436813.1 Product confidence : probable; Gene name confidence : NP_436814.1 Product confidence : Gene name confidence : NP_436818.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436821.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436822.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436823.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436824.1 Transcriptional repressor of the nan operon that encodes proteins involved in sialic acid utilization NP_436828.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436829.1 catalyzes the formation of pyruvate and N-acetylmannosamine from N-acetylneuraminic acid NP_436833.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436834.2 Product confidence : probable; Gene name confidence : NP_436835.1 Product confidence : Gene name confidence : NP_436836.1 Product confidence : probable; Gene name confidence : NP_436845.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436850.1 Product confidence : Gene name confidence : NP_436851.1 Product confidence : probable; Gene name confidence : probable NP_436852.1 Product confidence : probable; Gene name confidence : probable NP_436853.1 Product confidence : probable; Gene name confidence : probable NP_436854.1 Product confidence : probable; Gene name confidence : probable NP_436855.1 Product confidence : probable; Gene name confidence : probable NP_436856.1 Product confidence : probable; Gene name confidence : probable NP_436857.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436858.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436859.2 Product confidence : probable; Gene name confidence : hypothetical NP_436860.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436861.2 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436862.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436865.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436866.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436867.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436874.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436875.1 Product confidence : probable; Gene name confidence : NP_436877.1 Product confidence : probable; Gene name confidence : hypothetical NP_436878.1 Product confidence : probable; Gene name confidence : hypothetical NP_436880.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436881.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436885.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436886.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436894.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436895.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436897.1 catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity NP_436902.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436911.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436912.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436915.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436916.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436918.1 Transcriptional repressor of the nan operon that encodes proteins involved in sialic acid utilization NP_436919.1 Product confidence : Gene name confidence : NP_436920.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436924.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436925.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436926.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436927.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436932.1 Product confidence : Gene name confidence : NP_436933.1 Product confidence : Gene name confidence : NP_436934.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436937.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436938.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436939.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436940.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436942.1 Product confidence : probable; Gene name confidence : NP_436943.1 Product confidence : probable; Gene name confidence : NP_436944.1 Product confidence : probable; Gene name confidence : NP_436945.1 part of the UgpABCE glycerol-3-phosphate uptake system NP_436947.1 Product confidence : Gene name confidence : NP_436952.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436957.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436958.1 catalyzes the formation of 2-oxobutanoate from L-threonine; involved in ectoine utilization NP_436959.1 cyclodeaminase NP_436961.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436968.1 catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate NP_436969.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436970.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436973.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436974.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436976.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436983.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436985.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436986.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436987.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436988.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436991.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436992.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436993.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436995.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436996.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_436997.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437003.1 Product confidence : Gene name confidence : NP_437004.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437010.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437012.1 Product confidence : Gene name confidence : NP_437015.1 member of a large family of NAD or NADP-dependent oxidoreductases; paralogs occur in many bacteria NP_437017.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437018.1 Product confidence : probable; Gene name confidence : hypothetical NP_437019.1 Product confidence : Gene name confidence : NP_437020.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437028.1 Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose NP_437029.1 Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose NP_437032.1 Product confidence : probable; Gene name confidence : NP_437034.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437038.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437039.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437040.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437041.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437042.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437043.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437044.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437046.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437047.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437048.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437049.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437050.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription NP_437051.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437053.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437055.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437058.1 Product confidence : probable; Gene name confidence : NP_437059.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437064.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437065.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437066.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437067.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437068.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437069.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437070.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437071.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437072.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437073.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437074.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437075.2 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437076.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437077.2 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437078.2 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437079.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437080.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437081.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437082.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437083.1 Product confidence : probable; Gene name confidence : NP_437084.1 Product confidence : NP_437085.1 Product confidence : NP_437088.1 Product confidence : NP_437089.1 Product confidence : Gene name confidence : NP_437091.1 Product confidence : NP_437092.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437093.2 Product confidence : Gene name confidence : NP_437094.1 Product confidence : NP_437098.2 Product confidence : probable; Gene name confidence : probable NP_437099.1 Product confidence : probable; Gene name confidence : probable NP_437100.1 Product confidence : probable; Gene name confidence : probable NP_437102.1 Product confidence : Gene name confidence : probable NP_437103.1 Product confidence : Gene name confidence : NP_437108.1 Product confidence : NP_437109.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437110.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437111.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437113.1 Product confidence : Gene name confidence : NP_437115.1 Product confidence : Gene name confidence : probable NP_437116.1 Product confidence : Gene name confidence : probable NP_437117.1 Product confidence : probable; Gene name confidence : NP_437118.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437119.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437120.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437123.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437124.2 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437125.1 Product confidence : NP_437126.1 Product confidence : Gene name confidence : NP_437134.1 Product confidence : NP_437135.1 Product confidence : probable; Gene name confidence : hypothetical NP_437137.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437139.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437140.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437141.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437142.1 Product confidence : NP_437143.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437144.2 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437145.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437146.1 Product confidence : NP_437147.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437148.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437154.1 catalyzes the release of the N-terminal amino acid from a tripeptide NP_437157.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437158.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437159.1 Product confidence : Gene name confidence : NP_437160.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437161.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437162.2 Product confidence : Gene name confidence : NP_437163.2 Product confidence : Gene name confidence : NP_437165.2 Product confidence : Gene name confidence : NP_437166.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437167.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437168.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437169.1 Product confidence : probable; Gene name confidence : NP_437171.1 Product confidence : NP_437172.1 Product confidence : NP_437173.1 Product confidence : NP_437176.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437177.1 Product confidence : NP_437178.1 Product confidence : NP_437179.1 Product confidence : NP_437180.1 Product confidence : NP_437181.1 Product confidence : NP_437182.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437183.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437184.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437185.1 Product confidence : NP_437186.1 Product confidence : NP_437187.1 Product confidence : NP_437188.2 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437189.1 Product confidence : Gene name confidence : NP_437190.1 Product confidence : NP_437191.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437192.1 Product confidence : Gene name confidence : probable NP_437193.1 Product confidence : NP_437194.1 Product confidence : NP_437195.1 Product confidence : NP_437196.1 Product confidence : NP_437197.1 Product confidence : NP_437198.1 Product confidence : NP_437199.1 Product confidence : NP_437200.1 Product confidence : probable; Gene name confidence : NP_437201.1 Product confidence : probable; Gene name confidence : NP_437202.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437203.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437204.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437205.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437206.1 Product confidence : Gene name confidence : NP_437207.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437209.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437210.1 Product confidence : Gene name confidence : NP_437212.1 Product confidence : NP_437213.1 catalyzes the formation of arginine from (N-L-arginino)succinate NP_437217.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437218.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437220.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437221.1 Product confidence : NP_437227.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437232.2 Product confidence : Gene name confidence : NP_437233.1 Product confidence : Gene name confidence : NP_437235.1 Product confidence : NP_437236.1 Product confidence : NP_437238.2 Product confidence : Gene name confidence : NP_437239.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437240.1 Product confidence : Gene name confidence : NP_437241.1 Product confidence : Gene name confidence : NP_437242.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437243.1 Product confidence : Gene name confidence : NP_437244.1 catalyzes the formation of acetoacetate and acetyl-CoA from 3-hydroxy-3-methylglutaryl-CoA NP_437245.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA NP_437246.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437247.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437253.1 Product confidence : NP_437258.1 Product confidence : NP_437259.1 Product confidence : NP_437266.1 Product confidence : NP_437267.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP NP_437268.1 in Rhizobium meliloti this protein is involved in the synthesis of nodulation factors that are active on the roots of alfalfa; catalyzes formation of activated sulfate intermediate; converts ATP and sulfate to diphosphate and adenylylsulfate and then ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; the activated intermediate is transferred to the nodulation factors by NodH; may interact with NodP and NodQ; similar to the CysD and CysN proteins from EScherichia coli involved in cysteine biosynthesis NP_437269.1 Product confidence : NP_437270.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437271.1 undetermined role; similar to CarB protein but much smaller NP_437272.1 Product confidence : NP_437274.1 Product confidence : NP_437275.1 Product confidence : NP_437276.1 Product confidence : NP_437277.1 Product confidence : probable; Gene name confidence : NP_437278.2 Product confidence : probable; Gene name confidence : NP_437279.1 Product confidence : NP_437280.1 Product confidence : NP_437282.1 Product confidence : NP_437283.1 Product confidence : NP_437284.1 Product confidence : NP_437286.1 Product confidence : NP_437287.1 Product confidence : NP_437289.1 Product confidence : Gene name confidence : NP_437290.2 Product confidence : NP_437291.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437292.1 Product confidence : NP_437293.1 Product confidence : NP_437294.1 Product confidence : NP_437295.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437296.1 Product confidence : NP_437297.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437298.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437299.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437300.1 Product confidence : NP_437301.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437302.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437303.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437308.1 Product confidence : NP_437309.1 Product confidence : NP_437311.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437312.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437313.1 Product confidence : NP_437314.1 Product confidence : NP_437315.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437316.1 Product confidence : NP_437317.1 Product confidence : Gene name confidence : NP_437318.1 Product confidence : Gene name confidence : NP_437319.1 Product confidence : Gene name confidence : NP_437321.1 Product confidence : NP_437322.1 Product confidence : probable; Gene name confidence : probable NP_437324.1 Involved in nucleotide synthesis and salvage NP_437325.1 Product confidence : NP_437327.1 catalyzes the formation of S-ureidoglycolate and urea from allantoate NP_437329.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437330.1 Product confidence : probable; Gene name confidence : probable NP_437331.1 Product confidence : Gene name confidence : NP_437332.1 Product confidence : probable; Gene name confidence : probable NP_437333.1 Product confidence : NP_437334.1 Product confidence : NP_437335.1 Product confidence : NP_437336.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437337.1 Catalyzes the deamination of guanine NP_437340.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437341.1 Product confidence : probable; Gene name confidence : NP_437342.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437343.1 Product confidence : Gene name confidence : NP_437344.1 Product confidence : NP_437346.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437347.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437348.1 Product confidence : NP_437349.3 Enables the enzymatic reduction of mercuric ions to elemental mercury NP_437357.1 Product confidence : NP_437360.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437361.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437362.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437364.1 Product confidence : NP_437366.1 Product confidence : Gene name confidence : NP_437367.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437368.1 Product confidence : NP_437369.1 catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism NP_437370.1 Product confidence : Gene name confidence : probable NP_437371.1 catalyzes the degradation of histidine to urocanate and ammmonia NP_437372.3 catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway NP_437374.1 Product confidence : NP_437376.1 Product confidence : NP_437377.1 Product confidence : Gene name confidence : NP_437378.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437379.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437386.1 Product confidence : NP_437387.1 Product confidence : NP_437389.1 molecular chaperone NP_437390.1 AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA NP_437391.1 Product confidence : Gene name confidence : NP_437392.1 catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate NP_437393.1 Product confidence : NP_437397.1 Product confidence : Gene name confidence : NP_437398.1 class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis NP_437401.1 Product confidence : Gene name confidence : NP_437402.1 Product confidence : Gene name confidence : NP_437403.1 Product confidence : Gene name confidence : NP_437404.1 Product confidence : Gene name confidence : NP_437405.1 Product confidence : NP_437407.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437409.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437414.2 Product confidence : NP_437416.1 Product confidence : NP_437417.1 Product confidence : NP_437418.1 Product confidence : NP_437419.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437420.1 Product confidence : Gene name confidence : NP_437422.1 Product confidence : Gene name confidence : probable NP_437423.1 Product confidence : NP_437424.1 Product confidence : NP_437425.1 Product confidence : NP_437426.1 Product confidence : NP_437427.1 Product confidence : NP_437428.1 Product confidence : NP_437429.1 Product confidence : NP_437430.1 Product confidence : NP_437431.1 Product confidence : NP_437432.1 Product confidence : NP_437434.1 Product confidence : NP_437435.1 Product confidence : NP_437436.1 Product confidence : NP_437437.1 Product confidence : NP_437438.1 Product confidence : NP_437439.1 Product confidence : NP_437440.1 Product confidence : NP_437441.1 Product confidence : NP_437442.1 Product confidence : NP_437443.1 Product confidence : NP_437445.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437446.2 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437447.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437448.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437449.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437450.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437452.1 Product confidence : NP_437457.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437462.1 Product confidence : NP_437463.1 Product confidence : NP_437464.1 Product confidence : NP_437465.1 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2,5-hexodiulosonate NP_437466.1 Product confidence : NP_437467.1 Product confidence : Gene name confidence : NP_437468.1 Product confidence : Gene name confidence : NP_437469.1 Product confidence : Gene name confidence : NP_437470.1 catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate; functions in glucuronic and galacturonic metabolism NP_437472.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437473.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437474.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437475.1 Product confidence : NP_437476.1 Product confidence : NP_437477.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437478.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437479.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437480.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437482.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437483.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437484.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437485.1 Product confidence : Gene name confidence : NP_437489.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437490.1 Product confidence : NP_437496.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437497.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437499.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437500.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437503.1 Product confidence : NP_437504.1 Product confidence : NP_437505.1 Product confidence : Gene name confidence : NP_437506.1 Product confidence : Gene name confidence : NP_437507.1 Product confidence : Gene name confidence : NP_437508.2 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437509.1 Product confidence : Gene name confidence : NP_437510.1 catalyzes the formation of acetyl phosphate and sulfite from 2-sulfoacetaldehyde; is active when grown on taurine as a sole carbon source NP_437511.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437512.1 Product confidence : Gene name confidence : NP_437513.1 Product confidence : NP_437515.1 Product confidence : NP_437516.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437517.1 catalyzes the formation of phosphonoacetaldehyde from 2-aminoethylphosphonate and pyruvate NP_437518.1 Product confidence : Gene name confidence : NP_437520.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437522.1 Product confidence : NP_437525.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437526.1 Product confidence : NP_437527.1 Product confidence : NP_437528.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437529.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437530.1 Product confidence : NP_437531.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437532.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437533.1 Product confidence : Gene name confidence : NP_437535.1 Product confidence : Gene name confidence : NP_437539.1 Product confidence : NP_437540.1 Product confidence : NP_437541.1 Product confidence : NP_437542.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437543.1 Product confidence : NP_437544.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437545.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437546.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; the rhizobia and the high GC gram-positive bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the S. meliloti protein in this cluster is associated with a groES gene and is required for regulation of the early genes involved in nodular formation NP_437548.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437549.1 Product confidence : NP_437550.1 Product confidence : Gene name confidence : NP_437551.1 Product confidence : NP_437555.1 Product confidence : NP_437556.1 Product confidence : NP_437557.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437558.1 Product confidence : Gene name confidence : NP_437559.1 Product confidence : Gene name confidence : NP_437560.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437563.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437564.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437565.2 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437566.1 The second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione NP_437570.1 membrane component of a sugar ABC transporter system NP_437571.1 Product confidence : NP_437576.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437578.1 Product confidence : NP_437580.1 Product confidence : NP_437581.1 Product confidence : NP_437586.1 Product confidence : NP_437587.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437588.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437589.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437590.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437596.1 Product confidence : Gene name confidence : probable NP_437597.1 Product confidence : Gene name confidence : probable NP_437598.1 Product confidence : Gene name confidence : probable NP_437599.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437600.1 Product confidence : Gene name confidence : probable NP_437601.1 Product confidence : hypothetical; Gene name confidence : probable NP_437602.1 Product confidence : Gene name confidence : probable NP_437603.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437607.1 Product confidence : NP_437608.1 Product confidence : hypothetical NP_437612.1 Product confidence : NP_437615.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437616.1 Product confidence : Gene name confidence : probable NP_437617.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437618.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437627.1 Product confidence : probable; Gene name confidence : NP_437628.1 Product confidence : NP_437631.1 Product confidence : Gene name confidence : NP_437632.1 Product confidence : NP_437633.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437642.1 Product confidence : NP_437643.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437647.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437648.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437649.1 Product confidence : Gene name confidence : NP_437650.1 Product confidence : Gene name confidence : NP_437651.1 Product confidence : Gene name confidence : NP_437653.2 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437655.1 Product confidence : probable; Gene name confidence : NP_437656.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437657.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437658.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437660.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437661.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains NP_437662.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437664.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437665.1 in Escherichia coli SbmA is involved in uptake of microcin J25; functions along with FhuA, TonB, and ExbB/D in this capacity; in Sinorhizobium meliloti, BacA is essential and required for symbiosis; defects appear to affect the cell envelope NP_437667.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437668.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mnin Bacillus subtilis the protein in this cluster is considered non-essential NP_437670.2 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437671.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437672.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437673.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437674.1 Product confidence : NP_437675.1 Product confidence : probable; Gene name confidence : probable NP_437677.1 Product confidence : probable; Gene name confidence : probable NP_437678.1 Product confidence : probable; Gene name confidence : probable NP_437679.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437680.2 Product confidence : NP_437682.1 Catalyzes the deamination of guanine NP_437683.1 Product confidence : Gene name confidence : NP_437690.1 catalyzes the formation of D-fructose 6-phosphate from D-glucose 6-phosphate NP_437692.1 Product confidence : NP_437693.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437696.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437697.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437698.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437699.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437700.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437702.1 Product confidence : NP_437703.1 Product confidence : NP_437704.1 Product confidence : NP_437706.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437707.1 catalyzes the formation of glyoxylate from (S)-ureidoglycolate NP_437708.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437709.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437710.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437712.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437713.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437714.1 Product confidence : Gene name confidence : probable NP_437715.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437716.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437717.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437718.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437719.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437720.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437721.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437722.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437724.1 catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate NP_437726.1 Product confidence : Gene name confidence : probable NP_437727.1 Product confidence : probable; Gene name confidence : probable NP_437728.1 Product confidence : probable; Gene name confidence : probable NP_437729.1 Product confidence : probable; Gene name confidence : probable NP_437730.1 Product confidence : probable; Gene name confidence : probable NP_437731.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437732.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437733.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437734.1 Product confidence : hypothetical NP_437735.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437736.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437737.1 Product confidence : NP_437742.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437743.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437744.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437745.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437746.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437747.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437748.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437749.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437751.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437752.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437753.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437755.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437756.1 Gene name confidence : NP_437757.1 Gene name confidence : NP_437758.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437759.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437760.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437761.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437762.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437763.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437764.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437765.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437766.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437767.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437768.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437769.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437770.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437771.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437772.1 Product confidence : NP_437773.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437774.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437775.1 Product confidence : YP_002122334.1 truncated NP_437778.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437779.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437780.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437781.1 Product confidence : NP_437783.1 Product confidence : NP_437784.1 Product confidence : NP_437785.1 Product confidence : NP_437786.1 Product confidence : NP_437787.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437794.1 Product confidence : NP_437796.1 Product confidence : NP_437802.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437803.1 Product confidence : NP_437804.1 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide NP_437809.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437811.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437812.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437813.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437815.1 Product confidence : probable; Gene name confidence : probable NP_437816.1 Product confidence : Gene name confidence : NP_437817.1 Product confidence : NP_437818.1 Product confidence : probable; Gene name confidence : probable NP_437819.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437820.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437821.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437822.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437823.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437829.1 Product confidence : NP_437830.1 Product confidence : NP_437833.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437834.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437835.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437836.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437837.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437838.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437840.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis NP_437841.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437842.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437844.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437845.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437846.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437847.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437848.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437849.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437850.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437851.1 Product confidence : Gene name confidence : NP_437852.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437853.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437855.1 Product confidence : Gene name confidence : NP_437856.1 Product confidence : Gene name confidence : NP_437857.1 Product confidence : Gene name confidence : NP_437860.2 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437861.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437862.1 Product confidence : NP_437863.1 catalyzes the formation of L-proline from L-ornithine NP_437864.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437871.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437875.1 Product confidence : Gene name confidence : NP_437877.1 Product confidence : NP_437878.1 Product confidence : Gene name confidence : NP_437882.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437883.1 Product confidence : Gene name confidence : NP_437884.1 Product confidence : Gene name confidence : NP_437885.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437886.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437887.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437888.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437889.1 Product confidence : NP_437890.1 Product confidence : NP_437891.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437892.1 works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell NP_437893.1 Product confidence : Gene name confidence : NP_437894.1 blocks the formation of polar Z-ring septums NP_437895.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437897.1 catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers NP_437899.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437900.1 Product confidence : Gene name confidence : NP_437901.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437902.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437904.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437910.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437912.1 Product confidence : Gene name confidence : NP_437915.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437916.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437917.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437922.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437923.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437924.1 catalyzes the formation of glyoxylate from (S)-ureidoglycolate NP_437925.1 Product confidence : Gene name confidence : NP_437927.1 Product confidence : Gene name confidence : NP_437928.1 catalyzes the formation of 2-hydroxy-3-oxopropanoate (tartronate semialdehyde) from two molecules of glyoxylate NP_437929.1 Product confidence : Gene name confidence : NP_437931.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437932.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437934.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437935.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437936.1 Product confidence : probable; Gene name confidence : probable NP_437937.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437938.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437941.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437942.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437943.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437947.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437948.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437950.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437951.1 catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose NP_437952.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437954.1 Product confidence : Gene name confidence : NP_437956.1 responsible for recognizing base lesions in the genome and initiating base excision DNA repair NP_437958.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437959.1 Product confidence : Gene name confidence : probable NP_437963.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437970.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437971.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437972.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437973.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437974.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437975.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437976.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437977.1 Product confidence : Gene name confidence : probable NP_437978.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437979.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437980.1 Product confidence : Gene name confidence : NP_437981.1 Product confidence : Gene name confidence : NP_437984.1 catalyzes the formation of 3-hydroxy-2-methylpropanoate from 3-hydroxy-2-methylpropanoyl-CoA NP_437986.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_437987.1 Product confidence : Gene name confidence : NP_437988.1 Product confidence : Gene name confidence : probable NP_437989.1 MDM; functions in conversion of succinate to propionate NP_437991.1 Product confidence : Gene name confidence : probable NP_437992.1 Product confidence : Gene name confidence : probable NP_437993.1 Product confidence : Gene name confidence : probable NP_437994.1 Product confidence : Gene name confidence : probable NP_437995.1 Product confidence : Gene name confidence : probable NP_437996.1 Product confidence : Gene name confidence : probable NP_437998.1 Product confidence : Gene name confidence : NP_437999.1 in some organisms the DhaK and DhaL subunits are encoded by separate genes; in others they are fused; functions along with DhaM to phosphorylate dihydroxyacetone NP_438000.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_438001.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_438002.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_438003.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_438004.1 catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate) NP_438006.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_438007.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_438008.1 Product confidence : Gene name confidence : NP_438009.1 Product confidence : Gene name confidence : NP_438011.2 Product confidence : hypothetical; Gene name confidence : hypothetical NP_438014.2 Product confidence : hypothetical; Gene name confidence : hypothetical NP_438015.1 Product confidence : Gene name confidence : NP_438024.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_438027.1 Catalyzes the cycloisomerization of cis,cis-muconate NP_438028.1 Product confidence : Gene name confidence : NP_438029.1 Product confidence : Gene name confidence : NP_438030.1 Product confidence : Gene name confidence : NP_438031.1 Product confidence : Gene name confidence : NP_438032.1 Product confidence : Gene name confidence : NP_438035.1 catalyzes the formation of protocatechuate from 4-hydroxybenzoate NP_438036.2 Product confidence : hypothetical; Gene name confidence : hypothetical NP_438037.1 Product confidence : Gene name confidence : NP_438041.1 catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA NP_438042.1 catalyzes the hydrolysis of acylphosphate NP_438043.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_438044.1 member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription NP_438045.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_438046.1 Product confidence : Gene name confidence : NP_438048.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_438049.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_438050.1 Product confidence : probable; Gene name confidence : probable NP_438051.1 Product confidence : Gene name confidence : NP_438052.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_438058.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_438059.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_438063.1 involved in the transport of C4-dicarboxylates across the membrane NP_438066.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_438067.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine NP_438068.1 Product confidence : Gene name confidence : NP_438069.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate NP_438070.1 Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate NP_438072.1 Product confidence : Gene name confidence : NP_438075.1 phosphorylates methylthioribose to form methylthioribose-1-phosphate; involved in methionine salvage pathway NP_438076.1 isomerizes methylthioribose-1-phosphate into methylthioribulose-1-phosphate; involved in methionine salvage pathway NP_438077.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_438079.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_438080.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_438081.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_438086.1 Product confidence : Gene name confidence : NP_438088.2 Product confidence : Gene name confidence : NP_438089.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_438090.1 Product confidence : Gene name confidence : NP_438092.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA NP_438094.3 catalyzes the ring cleavage reaction in phenylacetate degradation and the formation of 3-hydroxyacyl-CoA from crotonyl-CoA NP_438095.1 Product confidence : Gene name confidence : NP_438096.1 Product confidence : Gene name confidence : NP_438097.1 Product confidence : Gene name confidence : NP_438098.1 with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; involved in phenylacetate degradation NP_438099.1 with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA NP_438100.1 Product confidence : Gene name confidence : NP_438101.1 Product confidence : hypothetical; Gene name confidence : hypothetical NP_438102.1 Product confidence : probable; Gene name confidence : probable