-- dump date   	20140620_065236
-- class       	Genbank::Feature
-- table       	feature
-- table       	main
-- field 1	id
-- field 2	type
-- field 3	name
-- field 4	contig
-- field 5	start_pos
-- field 6	end_pos
-- field 7	strand
-- field 8	description
-- field 9	chrom_position
-- field 10	organism
-- field 11	GeneID
-- header
-- id	type	name	contig	start_pos	end_pos	strand	description	chrom_position	organism	GeneID
198215000001	SEQ_END	SEQ_END	NC_004741.1	4599354	4599354	DR	NC_004741.1; contig end	4599354..4599354	Shigella flexneri 2a str. 2457T	<NULL_VALUE>
NP_835743.1	CDS	thrL	NC_004741.1	190	255	D	residues 1 to 21 of 21 are 100 pct identical to residues 1 to 21 of 21 from Escherichia coli K-12 : B0001; thr operon leader peptide	190..255	Shigella flexneri 2a str. 2457T	1076421
NP_835744.1	CDS	thrA	NC_004741.1	336	2798	D	multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; bifunctional aspartokinase I/homeserine dehydrogenase I	336..2798	Shigella flexneri 2a str. 2457T	1076422
NP_835745.1	CDS	thrB	NC_004741.1	2800	3732	D	catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase	2800..3732	Shigella flexneri 2a str. 2457T	1076423
NP_835746.1	CDS	thrC	NC_004741.1	3733	5019	D	catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase	3733..5019	Shigella flexneri 2a str. 2457T	1076424
NP_835747.1	CDS	S0005	NC_004741.1	5242	5529	D	residues 1 to 65 of 95 are 60.00 pct identical to residues 4 to 68 of 98 from Escherichia coli K-12 : B0005; hypothetical protein	5242..5529	Shigella flexneri 2a str. 2457T	1076425
NP_835748.1	CDS	yaaA	NC_004741.1	5682	6458	R	residues 1 to 258 of 258 are 100.00 pct identical to residues 1 to 258 of 258 from Escherichia coli K-12 : B0006; hypothetical protein	complement(5682..6458)	Shigella flexneri 2a str. 2457T	1076426
NP_835749.1	CDS	talB	NC_004741.1	8237	9190	D	Maintains the balance of metabolites in the pentose-phosphate pathway; transaldolase B	8237..9190	Shigella flexneri 2a str. 2457T	1076428
NP_835750.1	CDS	mogA	NC_004741.1	9305	9892	D	forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein	9305..9892	Shigella flexneri 2a str. 2457T	1076431
NP_835751.1	CDS	yaaH	NC_004741.1	9927	10493	R	residues 1 to 188 of 188 are 92.02 pct identical to residues 1 to 188 of 188 from Escherichia coli K-12 : B0010; hypothetical protein	complement(9927..10493)	Shigella flexneri 2a str. 2457T	1077111
NP_835752.1	CDS	S0012	NC_004741.1	10642	11355	R	residues 1 to 237 of 237 are 82.27 pct identical to residues 1 to 237 of 237 from Escherichia coli K-12 : B0011; hypothetical protein	complement(10642..11355)	Shigella flexneri 2a str. 2457T	1078121
NP_835754.1	CDS	yaaI	NC_004741.1	11381	11785	R	residues 1 to 134 of 134 are 99.25 pct identical to residues 1 to 134 of 134 from Escherichia coli K-12 : B0013; hypothetical protein	complement(11381..11785)	Shigella flexneri 2a str. 2457T	1079962
NP_835755.1	CDS	dnaK	NC_004741.1	12162	14078	D	heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK	12162..14078	Shigella flexneri 2a str. 2457T	1080997
NP_835756.1	CDS	dnaJ	NC_004741.1	14167	15297	D	chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ	14167..15297	Shigella flexneri 2a str. 2457T	1080998
NP_835757.1	CDS	gef	NC_004741.1	15401	15610	R	residues 1 to 69 of 69 are 100.00 pct identical to residues 1 to 69 of 69 from Escherichia coli K-12 : B0018; regulated cell killing; membrane toxin	complement(15401..15610)	Shigella flexneri 2a str. 2457T	1076443
NP_835758.1	CDS	nhaA	NC_004741.1	16139	17305	D	exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH; pH-dependent sodium/proton antiporter	16139..17305	Shigella flexneri 2a str. 2457T	1078430
NP_835759.1	CDS	nhaR	NC_004741.1	17371	18270	D	Na+/H+ antiporter regulatory protein; activates the genes nhaA and osmC; transcriptional activator NhaR	17371..18270	Shigella flexneri 2a str. 2457T	1078188
NP_835760.1	CDS	S0020	NC_004741.1	18683	19186	R	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri]; IS1 orfB	complement(18683..19186)	Shigella flexneri 2a str. 2457T	1077777
NP_835761.1	CDS	S0021	NC_004741.1	19105	19380	R	residues 1 to 91 of 91 are 98.90 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(19105..19380)	Shigella flexneri 2a str. 2457T	1077582
NP_835762.2	CDS	rpsT	NC_004741.1	19769	20032	R	binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20	complement(19769..20032)	Shigella flexneri 2a str. 2457T	1076778
NP_835763.1	CDS	S0023	NC_004741.1	20135	20353	D	residues 1 to 72 of 72 are 98.61 pct identical to residues 1 to 72 of 72 from Escherichia coli K-12 : B0024; hypothetical protein	20135..20353	Shigella flexneri 2a str. 2457T	1076482
NP_835764.1	CDS	ribF	NC_004741.1	20361	21302	D	catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase	20361..21302	Shigella flexneri 2a str. 2457T	1076481
NP_835765.1	CDS	ileS	NC_004741.1	21345	24161	D	IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase	21345..24161	Shigella flexneri 2a str. 2457T	1076478
NP_835766.1	CDS	lspA	NC_004741.1	24161	24655	D	lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase	24161..24655	Shigella flexneri 2a str. 2457T	1076476
NP_835767.1	CDS	slpA	NC_004741.1	24742	25191	D	residues 1 to 149 of 149 are 100.00 pct identical to residues 1 to 149 of 149 from Escherichia coli K-12 : B0028; FKBX-type 16kD peptidyl-prolyl cis-trans isomerase (a rotamase)	24742..25191	Shigella flexneri 2a str. 2457T	1076475
NP_835768.1	CDS	ispH	NC_004741.1	25193	26143	D	catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase	25193..26143	Shigella flexneri 2a str. 2457T	1076472
NP_835769.1	CDS	yaaF	NC_004741.1	26209	27123	D	catalyzes the hydrolysis of both purine and pyrimidine ribonucleosides; ribonucleoside hydrolase RihC	26209..27123	Shigella flexneri 2a str. 2457T	1076471
NP_835770.1	CDS	dapB	NC_004741.1	27290	28111	D	catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase	27290..28111	Shigella flexneri 2a str. 2457T	1076470
NP_835771.1	CDS	carA	NC_004741.1	28567	29715	D	catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit	28567..29715	Shigella flexneri 2a str. 2457T	1076468
NP_835772.1	CDS	carB	NC_004741.1	29733	32954	D	four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit	29733..32954	Shigella flexneri 2a str. 2457T	1076467
NP_835773.2	CDS	caiF	NC_004741.1	33216	33611	D	regulator of carnitine metabolism; induces the caiTABCDE and fixABCX operons; DNA-binding transcriptional activator CaiF	33216..33611	Shigella flexneri 2a str. 2457T	1076466
NP_835774.1	CDS	caiE	NC_004741.1	33697	34308	R	involved in the synthesis of a cofactor required for carnitine dehydratase and carnitine racemase activities; carnitine operon protein CaiE	complement(33697..34308)	Shigella flexneri 2a str. 2457T	1076465
NP_835775.1	CDS	caiD	NC_004741.1	34293	35186	R	catalyzes the dehydration of L-carnitinyl-CoA to crotonobetainyl-CoA; carnitinyl-CoA dehydratase	complement(34293..35186)	Shigella flexneri 2a str. 2457T	1076464
NP_835776.1	CDS	caiC	NC_004741.1	35187	36755	R	residues 1 to 522 of 522 are 95.59 pct identical to residues 1 to 522 of 522 from Escherichia coli K-12 : B0037; crotonobetaine/carnitine-CoA ligase	complement(35187..36755)	Shigella flexneri 2a str. 2457T	1076463
NP_835777.1	CDS	caiB	NC_004741.1	36814	38031	R	catalyzes formation of L-carnitinyl-CoA by transfering the CoA moiety from gamma-butyrobetainyl-CoA, also catalyzes the formation of crotonobetainyl-CoA by transfer of CoA from gamma-butyrobetainyl-CoA or L-carnitinyl-CoA to crotonobetaine; crotonobetainyl-CoA:carnitine CoA-transferase	complement(36814..38031)	Shigella flexneri 2a str. 2457T	1076459
NP_835778.1	CDS	caiA	NC_004741.1	38160	39302	R	catalyzes the reduction of crotonobetainyl-CoA to gamma-butyrobetainyl-CoA; crotonobetainyl-CoA dehydrogenase	complement(38160..39302)	Shigella flexneri 2a str. 2457T	1076456
NP_835779.1	CDS	caiT	NC_004741.1	39333	40847	R	catalyzes the exchange of L-carnitine for gamma-butyrobetaine in carnitine metabolism; L-carnitine/gamma-butyrobetaine antiporter	complement(39333..40847)	Shigella flexneri 2a str. 2457T	1076454
NP_835780.2	CDS	fixA	NC_004741.1	41203	41973	D	required for anaerobic carnitine reduction, may act to transfer electrons to crotonobetaine reductase; electron transfer flavoprotein FixA	41203..41973	Shigella flexneri 2a str. 2457T	1076453
NP_835781.1	CDS	fixC	NC_004741.1	42980	44266	D	FAD/NAD(P)-binding domain; possibly part of an electron transfer system required for anaerobic carnitine reduction; oxidoreductase FixC	42980..44266	Shigella flexneri 2a str. 2457T	1076449
NP_835782.1	CDS	fixX	NC_004741.1	44263	44550	D	residues 1 to 95 of 95 are 98.94 pct identical to residues 1 to 95 of 95 from Escherichia coli K-12 : B0044; ferredoxin	44263..44550	Shigella flexneri 2a str. 2457T	1076448
NP_835783.1	CDS	yaaU	NC_004741.1	44609	46003	D	residues 1 to 443 of 464 are 97.06 pct identical to residues 1 to 443 of 443 from Escherichia coli K-12 : B0045; transporter	44609..46003	Shigella flexneri 2a str. 2457T	1076446
NP_835784.1	CDS	yabF	NC_004741.1	46051	46581	D	Required for full activity of KefC, a potassium-proton antiporter; glutathione-regulated potassium-efflux system ancillary protein KefF	46051..46581	Shigella flexneri 2a str. 2457T	1076445
NP_835785.1	CDS	kefC	NC_004741.1	46574	48436	D	transport system that facilitates potassium-efflux; glutathione-regulated potassium-efflux system protein KefC	46574..48436	Shigella flexneri 2a str. 2457T	1076444
NP_835786.1	CDS	folA	NC_004741.1	48627	49106	D	catalyzes the reduction of dihydrofolate to tetrahydrofolate; dihydrofolate reductase	48627..49106	Shigella flexneri 2a str. 2457T	1076432
NP_835787.1	CDS	apaH	NC_004741.1	49184	50026	R	hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP; diadenosine tetraphosphatase	complement(49184..50026)	Shigella flexneri 2a str. 2457T	1076433
NP_835788.1	CDS	apaG	NC_004741.1	50033	50410	R	protein associated with Co2+ and Mg2+ efflux; ApaG protein	complement(50033..50410)	Shigella flexneri 2a str. 2457T	1076885
NP_835789.1	CDS	ksgA	NC_004741.1	50413	51234	R	catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase	complement(50413..51234)	Shigella flexneri 2a str. 2457T	1076435
NP_835790.1	CDS	pdxA	NC_004741.1	51231	52220	R	catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase	complement(51231..52220)	Shigella flexneri 2a str. 2457T	1078040
NP_835791.1	CDS	surA	NC_004741.1	52220	53506	R	Chaperone involved in the folding of extracytoplasmic proteins, especially OmpA, OmpF and LamB; peptidyl-prolyl cis-trans isomerase SurA	complement(52220..53506)	Shigella flexneri 2a str. 2457T	1076439
NP_835792.1	CDS	imp	NC_004741.1	53559	55913	R	determines N-hexane tolerance and is involved in outer membrane permeability; organic solvent tolerance protein	complement(53559..55913)	Shigella flexneri 2a str. 2457T	1076437
NP_835793.1	CDS	djlA	NC_004741.1	56168	56983	D	functions as a co-chaperone with DnaK; involved in regulation of colanic acid capsule; inner membrane protein; dimerized via transmembrane domain; J-like domain is cytoplasmic and can functionally substitute for DnaJ; stimulates synthesis of colanic acid mucoid capsule through the RcsB/C signal transduction system; Dna-J like membrane chaperone protein	56168..56983	Shigella flexneri 2a str. 2457T	1076509
NP_835794.1	CDS	yabO	NC_004741.1	57100	57759	R	catalyzes the synthesis of pseudouridine from uracil-746 in 23S ribosomal RNA and from uracil-32 in the anticodon stem and loop of transfer RNAs; 23S rRNA/tRNA pseudouridine synthase A	complement(57100..57759)	Shigella flexneri 2a str. 2457T	1076488
NP_835795.1	CDS	hepA	NC_004741.1	57771	60677	R	transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA; ATP-dependent helicase HepA	complement(57771..60677)	Shigella flexneri 2a str. 2457T	1076440
NP_835796.1	CDS	polB	NC_004741.1	60842	63193	R	Has polymerase, DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C; DNA polymerase II	complement(60842..63193)	Shigella flexneri 2a str. 2457T	1076441
NP_835797.1	CDS	araD	NC_004741.1	63268	63963	R	catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source; L-ribulose-5-phosphate 4-epimerase	complement(63268..63963)	Shigella flexneri 2a str. 2457T	1080994
NP_835798.1	CDS	araA	NC_004741.1	64163	65665	R	catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism; L-arabinose isomerase	complement(64163..65665)	Shigella flexneri 2a str. 2457T	1079821
NP_835799.1	CDS	araB	NC_004741.1	65676	67376	R	catalyzes the phosphorylation of ribulose to ribulose 5-phosphate; ribulokinase	complement(65676..67376)	Shigella flexneri 2a str. 2457T	1079740
NP_835800.1	CDS	araC	NC_004741.1	67715	68593	D	positive and negative regulator; regulates the araBAD and araFGH operons and other genes involved in the transport and catabolism of L-arabinose; DNA-binding transcriptional regulator AraC	67715..68593	Shigella flexneri 2a str. 2457T	1077806
NP_835801.1	CDS	yabI	NC_004741.1	68679	69443	D	residues 1 to 254 of 254 are 99.21 pct identical to residues 1 to 254 of 254 from Escherichia coli K-12 : B0065; hypothetical protein	68679..69443	Shigella flexneri 2a str. 2457T	1076494
NP_835802.1	CDS	thiQ	NC_004741.1	69557	70255	R	with TbpA and ThiP is part of the thiamine and TPP transport system; thiamine transporter ATP-binding subunit	complement(69557..70255)	Shigella flexneri 2a str. 2457T	1076495
NP_835803.1	CDS	thiP	NC_004741.1	70239	71849	R	permease; with TbpA and ThiQ functions in transport of thiamine and thiamine pyrophosphate into the cell; repressed in presence of exogenous thiamine; thiamine transporter membrane protein	complement(70239..71849)	Shigella flexneri 2a str. 2457T	1076814
NP_835804.1	CDS	tbpA	NC_004741.1	71825	72808	R	part of the thiamine and TPP transport system tbpA-thiPQ; thiamine transporter substrate binding subunit	complement(71825..72808)	Shigella flexneri 2a str. 2457T	1076496
NP_835805.1	CDS	yabN	NC_004741.1	72972	74627	R	activates sgrS under glucose-phosphate stress conditions; transcriptional regulator SgrR	complement(72972..74627)	Shigella flexneri 2a str. 2457T	1080991
NP_835806.1	CDS	yabM	NC_004741.1	74949	76127	D	residues 1 to 392 of 392 are 97.95 pct identical to residues 1 to 392 of 392 from Escherichia coli K-12 : B0070; transporter	74949..76127	Shigella flexneri 2a str. 2457T	1076497
NP_835807.1	CDS	leuD	NC_004741.1	76176	76781	R	catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit	complement(76176..76781)	Shigella flexneri 2a str. 2457T	1076498
NP_835808.1	CDS	leuC	NC_004741.1	76792	78192	R	dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit	complement(76792..78192)	Shigella flexneri 2a str. 2457T	1076499
NP_835809.2	CDS	leuB	NC_004741.1	78195	79286	R	catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase	complement(78195..79286)	Shigella flexneri 2a str. 2457T	1079376
NP_835810.1	CDS	leuA	NC_004741.1	79286	80857	R	catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase	complement(79286..80857)	Shigella flexneri 2a str. 2457T	1076500
NP_835811.1	CDS	leuL	NC_004741.1	80950	81036	R	involved in attenuation control of the leuABCD operon in leucine biosynthesis; leu operon leader peptide	complement(80950..81036)	Shigella flexneri 2a str. 2457T	1076501
NP_835812.2	CDS	leuO	NC_004741.1	81695	82639	D	activator for leuABCD operon; member of LysR family of transcriptional activators; leucine transcriptional activator	81695..82639	Shigella flexneri 2a str. 2457T	1076503
NP_835813.2	CDS	ilvI	NC_004741.1	82957	84681	D	catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; acetolactate synthase 3 catalytic subunit	82957..84681	Shigella flexneri 2a str. 2457T	1076504
NP_835814.1	CDS	ilvH	NC_004741.1	84684	85175	D	with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit	84684..85175	Shigella flexneri 2a str. 2457T	1076505
NP_835816.1	CDS	fruR	NC_004741.1	85356	86360	D	binds D-fructose as an inducer; involved in regulation of operons for central pathways of carbon metabolism; DNA-binding transcriptional regulator FruR	85356..86360	Shigella flexneri 2a str. 2457T	1076507
NP_835817.1	CDS	S0078	NC_004741.1	86483	86758	D	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	86483..86758	Shigella flexneri 2a str. 2457T	1076508
NP_835818.1	CDS	S0079	NC_004741.1	86677	87180	D	residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri]; IS1 orfB	86677..87180	Shigella flexneri 2a str. 2457T	1076510
NP_835819.1	CDS	yabB	NC_004741.1	87739	88197	D	MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ	87739..88197	Shigella flexneri 2a str. 2457T	1076511
NP_835820.1	CDS	mraW	NC_004741.1	88199	89140	D	residues 1 to 313 of 313 are 95.20 pct identical to residues 1 to 313 of 313 from Escherichia coli K-12 : B0082; S-adenosyl-methyltransferase MraW	88199..89140	Shigella flexneri 2a str. 2457T	1078667
NP_835821.1	CDS	ftsL	NC_004741.1	89137	89502	D	membrane bound cell division protein at septum containing leucine zipper motif; cell division protein FtsL	89137..89502	Shigella flexneri 2a str. 2457T	1076512
NP_835822.1	CDS	ftsI	NC_004741.1	89518	91284	D	residues 1 to 588 of 588 are 96.76 pct identical to residues 1 to 588 of 588 from Escherichia coli K-12 : B0084; involved in septum formation; penicillin-binding protein 3; peptidoglycan synthetase	89518..91284	Shigella flexneri 2a str. 2457T	1076513
NP_835823.1	CDS	murE	NC_004741.1	91271	92758	D	involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase	91271..92758	Shigella flexneri 2a str. 2457T	1076514
NP_835824.1	CDS	murF	NC_004741.1	92755	94113	D	residues 1 to 452 of 452 are 94.91 pct identical to residues 1 to 452 of 452 from Escherichia coli K-12 : B0086; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase	92755..94113	Shigella flexneri 2a str. 2457T	1076515
NP_835825.1	CDS	mraY	NC_004741.1	94107	95189	D	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase	94107..95189	Shigella flexneri 2a str. 2457T	1076516
NP_835826.1	CDS	murD	NC_004741.1	95192	96508	D	UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase	95192..96508	Shigella flexneri 2a str. 2457T	1076517
NP_835827.1	CDS	ftsW	NC_004741.1	96508	97752	D	integral membrane protein involved in stabilizing FstZ ring during cell division; cell division protein FtsW	96508..97752	Shigella flexneri 2a str. 2457T	1076518
NP_835828.1	CDS	murG	NC_004741.1	97749	98816	D	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase	97749..98816	Shigella flexneri 2a str. 2457T	1076519
NP_835829.1	CDS	murC	NC_004741.1	98870	100345	D	Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase	98870..100345	Shigella flexneri 2a str. 2457T	1078273
NP_835830.1	CDS	ddl	NC_004741.1	100338	101258	D	D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase	100338..101258	Shigella flexneri 2a str. 2457T	1076520
NP_835831.1	CDS	ftsQ	NC_004741.1	101260	102090	D	involved in septum formation; cell division protein FtsQ	101260..102090	Shigella flexneri 2a str. 2457T	1076521
NP_835832.1	CDS	ftsA	NC_004741.1	102087	103349	D	ATP-binding involved in recruitment of FtsK to Z ring; essential cell division protein; colocalizes with FtsZ through direct interaction to the septal ring structure; structurally similar to eukaryotic actin; binds directly to the cell membrane; cell division protein FtsA	102087..103349	Shigella flexneri 2a str. 2457T	1076522
NP_835833.1	CDS	ftsZ	NC_004741.1	103410	104561	D	GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ	103410..104561	Shigella flexneri 2a str. 2457T	1076523
NP_835834.1	CDS	lpxC	NC_004741.1	104662	105579	D	zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase	104662..105579	Shigella flexneri 2a str. 2457T	1076524
NP_835835.2	CDS	yacA	NC_004741.1	105810	106322	D	secM translational pause allows for the initiation of secA translation; SecA regulator SecM	105810..106322	Shigella flexneri 2a str. 2457T	1076525
NP_835836.1	CDS	secA	NC_004741.1	106384	109089	D	functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA	106384..109089	Shigella flexneri 2a str. 2457T	1076526
NP_835837.1	CDS	mutT	NC_004741.1	109149	109538	D	residues 1 to 129 of 129 are 98.44 pct identical to residues 1 to 129 of 129 from Escherichia coli K-12 : B0099; prefers dGTP, causes AT-GC transversions; nucleoside triphosphate pyrophosphohydrolase	109149..109538	Shigella flexneri 2a str. 2457T	1076527
NP_835838.1	CDS	S0099	NC_004741.1	109553	109687	R	residues 1 to 44 of 44 are 97.72 pct identical to residues 1 to 44 of 44 from Escherichia coli K-12 : B0100; hypothetical protein	complement(109553..109687)	Shigella flexneri 2a str. 2457T	1076529
NP_835839.1	CDS	yacG	NC_004741.1	109638	109835	R	residues 1 to 65 of 65 are 100.00 pct identical to residues 1 to 65 of 65 from Escherichia coli K-12 : B0101; zinc-binding protein	complement(109638..109835)	Shigella flexneri 2a str. 2457T	1076530
NP_835840.1	CDS	yacF	NC_004741.1	109845	110588	R	residues 1 to 247 of 247 are 93.52 pct identical to residues 1 to 247 of 247 from Escherichia coli K-12 : B0102; hypothetical protein	complement(109845..110588)	Shigella flexneri 2a str. 2457T	1076531
NP_835841.1	CDS	coaE	NC_004741.1	110588	111208	R	catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase	complement(110588..111208)	Shigella flexneri 2a str. 2457T	1076532
NP_835842.1	CDS	guaC	NC_004741.1	111433	112476	D	catalyzes the NADPH-dependent deamination of GMP to inosine monophosphate; guanosine 5'-monophosphate oxidoreductase	111433..112476	Shigella flexneri 2a str. 2457T	1076533
NP_835843.1	CDS	S0104	NC_004741.1	112396	112503	R	residues 1 to 35 of 35 are 97.14 pct identical to residues 1 to 35 of 35 from Escherichia coli K-12 : B0105; hypothetical protein	complement(112396..112503)	Shigella flexneri 2a str. 2457T	1076534
NP_835844.1	CDS	hofC	NC_004741.1	112511	113713	R	residues 1 to 400 of 400 are 85.50 pct identical to residues 1 to 400 of 400 from Escherichia coli K-12 : B0106; involved in biogenesis of fimbriae, protein transport, DNA uptake; type IV pilin biogenesis protein	complement(112511..113713)	Shigella flexneri 2a str. 2457T	1076537
NP_835845.1	CDS	ppdD	NC_004741.1	114860	115300	R	residues 1 to 146 of 146 are 91.09 pct identical to residues 1 to 146 of 146 from Escherichia coli K-12 : B0108; major pilin subunit	complement(114860..115300)	Shigella flexneri 2a str. 2457T	1076540
NP_835846.1	CDS	nadC	NC_004741.1	115503	116396	R	catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide; quinolinate phosphoribosyltransferase	complement(115503..116396)	Shigella flexneri 2a str. 2457T	1076541
NP_835847.1	CDS	ampD	NC_004741.1	116484	117035	D	residues 1 to 183 of 183 are 97.81 pct identical to residues 1 to 183 of 183 from Escherichia coli K-12 : B0110; regulates ampC; N-acetyl-anhydromuranmyl-L-alanine amidase	116484..117035	Shigella flexneri 2a str. 2457T	1076542
NP_835848.1	CDS	ampE	NC_004741.1	117032	117886	D	involved in regulation of beta-lactamase; signaling protein; regulatory protein AmpE	117032..117886	Shigella flexneri 2a str. 2457T	1076543
NP_835849.1	CDS	aroP	NC_004741.1	117929	119302	R	residues 1 to 457 of 457 are 93.65 pct identical to residues 1 to 457 of 457 from Escherichia coli K-12 : B0112; aromatic amino acid transporter	complement(117929..119302)	Shigella flexneri 2a str. 2457T	1076544
NP_835850.1	CDS	pdhR	NC_004741.1	119843	120607	D	activates lctPRD operon; autoregulates itself through repression of pdhR-aceEF-lpdA operon; regulates pyruvate dehydrogenase complex; transcriptional regulator PdhR	119843..120607	Shigella flexneri 2a str. 2457T	1076545
NP_835851.1	CDS	aceE	NC_004741.1	120768	123431	D	E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1	120768..123431	Shigella flexneri 2a str. 2457T	1076546
NP_835852.1	CDS	aceF	NC_004741.1	123446	125326	D	E2 component of pyruvate dehydrogenase multienzyme complex; in Escherichia coli AceF contains three N-terminal lipoyl domains; dihydrolipoamide acetyltransferase	123446..125326	Shigella flexneri 2a str. 2457T	1077898
NP_835853.1	CDS	lpdA	NC_004741.1	125651	127075	D	E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase	125651..127075	Shigella flexneri 2a str. 2457T	1076547
NP_835854.1	CDS	acnB	NC_004741.1	129353	131950	D	catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase	129353..131950	Shigella flexneri 2a str. 2457T	1079612
NP_835855.2	CDS	yacL	NC_004741.1	132125	132487	D	residues 1 to 136 of 136 are 98.52 pct identical to residues 1 to 136 of 136 from Escherichia coli K-12 : B0119; hypothetical protein	132125..132487	Shigella flexneri 2a str. 2457T	1076549
NP_835856.1	CDS	speD	NC_004741.1	132525	133319	R	S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine; S-adenosylmethionine decarboxylase	complement(132525..133319)	Shigella flexneri 2a str. 2457T	1080931
NP_835857.1	CDS	speE	NC_004741.1	133335	134201	R	catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase	complement(133335..134201)	Shigella flexneri 2a str. 2457T	1076550
NP_835858.1	CDS	yacC	NC_004741.1	134307	134777	R	residues 1 to 156 of 156 are 98.71 pct identical to residues 1 to 156 of 156 from Escherichia coli K-12 : B0122; hypothetical protein	complement(134307..134777)	Shigella flexneri 2a str. 2457T	1076551
NP_835859.1	CDS	yacK	NC_004741.1	134820	136370	D	laccase; copper-stimulated phenoloxidase and ferroxidase which may be involved in copper detoxification; multicopper oxidase	134820..136370	Shigella flexneri 2a str. 2457T	1076552
NP_835860.1	CDS	gcd	NC_004741.1	136417	138807	R	residues 1 to 796 of 796 are 93.09 pct identical to residues 1 to 796 of 796 from Escherichia coli K-12 : B0124; glucose dehydrogenase	complement(136417..138807)	Shigella flexneri 2a str. 2457T	1076554
NP_835861.2	CDS	hpt	NC_004741.1	139013	139549	D	Catalyzes the salvage synthesis of inosine-5'-monophosphate (IMP) and guanosine-5'-monophosphate (GMP) from the purine bases hypoxanthine and guanine, respectively; hypoxanthine-guanine phosphoribosyltransferase	139013..139549	Shigella flexneri 2a str. 2457T	1076555
NP_835862.1	CDS	yadF	NC_004741.1	139590	140252	R	catalyzes the interconversion of bicarbonate and carbon dioxide; carbonic anhydrase	complement(139590..140252)	Shigella flexneri 2a str. 2457T	1076556
NP_835863.1	CDS	yadG	NC_004741.1	140361	141287	D	residues 1 to 308 of 308 are 99.67 pct identical to residues 1 to 308 of 308 from Escherichia coli K-12 : B0127; ATP-binding component of a transport system	140361..141287	Shigella flexneri 2a str. 2457T	1076558
NP_835864.1	CDS	yadH	NC_004741.1	141284	142054	D	residues 1 to 256 of 256 are 89.06 pct identical to residues 1 to 256 of 256 from Escherichia coli K-12 : B0128; hypothetical protein	141284..142054	Shigella flexneri 2a str. 2457T	1076559
NP_835865.1	CDS	yadI	NC_004741.1	142159	142599	D	residues 1 to 146 of 146 are 98.63 pct identical to residues 1 to 146 of 146 from Escherichia coli K-12 : B0129; PTS enzyme II B component	142159..142599	Shigella flexneri 2a str. 2457T	1076560
NP_835866.1	CDS	yadE	NC_004741.1	142663	143892	D	residues 1 to 409 of 409 are 97.79 pct identical to residues 1 to 409 of 409 from Escherichia coli K-12 : B0130; hypothetical protein	142663..143892	Shigella flexneri 2a str. 2457T	1076561
NP_835867.1	CDS	panD	NC_004741.1	143896	144276	R	Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase	complement(143896..144276)	Shigella flexneri 2a str. 2457T	1076562
NP_835868.1	CDS	yadD	NC_004741.1	144550	145452	D	residues 1 to 300 of 300 are 92.66 pct identical to residues 1 to 300 of 300 from Escherichia coli K-12 : B0132; hypothetical protein	144550..145452	Shigella flexneri 2a str. 2457T	1077863
NP_835869.1	CDS	panC	NC_004741.1	145526	146377	R	catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase	complement(145526..146377)	Shigella flexneri 2a str. 2457T	1076563
NP_835870.1	CDS	panB	NC_004741.1	146389	147183	R	catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase	complement(146389..147183)	Shigella flexneri 2a str. 2457T	1076564
NP_835871.1	CDS	S0134	NC_004741.1	147677	147952	D	residues 1 to 91 of 91 are 98.90 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	147677..147952	Shigella flexneri 2a str. 2457T	1076567
NP_835872.1	CDS	S0136	NC_004741.1	147871	148374	D	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri]; IS1 orfB	147871..148374	Shigella flexneri 2a str. 2457T	1076568
NP_835873.1	CDS	folK	NC_004741.1	148522	149001	R	catalyzes the formation of 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine diphosphate from 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine and ATP; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase	complement(148522..149001)	Shigella flexneri 2a str. 2457T	1076569
NP_835874.2	CDS	pcnB	NC_004741.1	148998	150416	R	Polymerase that creates the 3' poly(A) tail found in some mRNA's; poly(A) polymerase I	complement(148998..150416)	Shigella flexneri 2a str. 2457T	1076570
NP_835875.2	CDS	yadB	NC_004741.1	150455	151351	R	this tRNA synthetase lacks the tRNA anticodon interaction domain; instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the first anticodon position of tRNAAsp; the modified tRNA does not bind elongation factor Tu; glutamyl-Q tRNA(Asp) synthetase	complement(150455..151351)	Shigella flexneri 2a str. 2457T	1076573
NP_835876.1	CDS	dksA	NC_004741.1	151418	151873	R	residues 1 to 151 of 151 are 90.06 pct identical to residues 1 to 151 of 151 from Escherichia coli K-12 : B0145; DnaK transcriptional regulator DksA	complement(151418..151873)	Shigella flexneri 2a str. 2457T	1076574
NP_835877.1	CDS	sfsA	NC_004741.1	152051	152755	R	Regulatory factor involved in maltose metabolism; sugar fermentation stimulation protein A	complement(152051..152755)	Shigella flexneri 2a str. 2457T	1076575
NP_835878.1	CDS	yadP	NC_004741.1	152770	153309	R	residues 1 to 179 of 179 are 99.44 pct identical to residues 1 to 179 of 179 from Escherichia coli K-12 : B0147; hypothetical protein	complement(152770..153309)	Shigella flexneri 2a str. 2457T	1076576
NP_835879.1	CDS	hrpB	NC_004741.1	153329	155803	D	similar in sequence to the ATP-dependent RNA helicase HrpA; ATP-dependent RNA helicase HrpB	153329..155803	Shigella flexneri 2a str. 2457T	1076578
NP_835880.1	CDS	mrcB	NC_004741.1	155999	158533	D	bifunctional periplasmic enzyme; contains transglycosylase and transpeptidase activity; major enzyme for peptidoglycan biosynthesis in Escherichia coli; transmembrane protein; forms dimers; three variants, one of which may be a degradation product, while the other appears to result from an alternative initiation site, are found within the cell; penicillin-binding protein 1b	155999..158533	Shigella flexneri 2a str. 2457T	1076579
NP_835881.1	CDS	fhuA	NC_004741.1	158753	160996	D	involved with the transport of ferrichrome across the outer membrane; binds the ferrichrome-iron ligand and interacts with the TonB protein; ferrichrome outer membrane transporter	158753..160996	Shigella flexneri 2a str. 2457T	1076580
NP_835882.1	CDS	fhuC	NC_004741.1	161047	161844	D	part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter; iron-hydroxamate transporter ATP-binding subunit	161047..161844	Shigella flexneri 2a str. 2457T	1076581
NP_835883.1	CDS	fhuD	NC_004741.1	161844	162734	D	Part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter; binds to all hydroxamate siderophores; iron-hydroxamate transporter substrate-binding subunit	161844..162734	Shigella flexneri 2a str. 2457T	1076582
NP_835884.1	CDS	fhuB	NC_004741.1	162731	164713	D	part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter involved in the high-affinity transport of Fe(3+)-ferrichrome; iron-hydroxamate transporter permease subunit	162731..164713	Shigella flexneri 2a str. 2457T	1076583
NP_835885.1	CDS	hemL	NC_004741.1	164748	166028	R	Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase	complement(164748..166028)	Shigella flexneri 2a str. 2457T	1076566
NP_835886.1	CDS	yadQ	NC_004741.1	166253	167674	D	Acts as an electrical shunt for an outwardly-directed proton pump that is linked to amino acid decarboxylation; chloride channel protein	166253..167674	Shigella flexneri 2a str. 2457T	1076584
NP_835887.1	CDS	yadR	NC_004741.1	167756	168100	D	essential respiratory protein A; may be involved in the transfer of iron-sulfur clusters; essential for growth using oxygen or alternate electron acceptors; iron-sulfur cluster insertion protein ErpA	167756..168100	Shigella flexneri 2a str. 2457T	1077758
NP_835888.1	CDS	yadS	NC_004741.1	168147	168770	R	residues 1 to 207 of 207 are 85.99 pct identical to residues 1 to 207 of 207 from Escherichia coli K-12 : B0157; hypothetical protein	complement(168147..168770)	Shigella flexneri 2a str. 2457T	1076585
NP_835889.1	CDS	yadT	NC_004741.1	168808	169608	R	solute binding component of the vitamin B12 transport system BtuCDF; vitamin B12-transporter protein BtuF	complement(168808..169608)	Shigella flexneri 2a str. 2457T	1076586
NP_835890.1	CDS	pfs	NC_004741.1	169601	170299	R	enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase	complement(169601..170299)	Shigella flexneri 2a str. 2457T	1076587
NP_835891.1	CDS	dgt	NC_004741.1	170383	171900	D	forms a homotetramer; requires magnesium for activity; catalyzes the hydrolysis of dGTP to form deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase	170383..171900	Shigella flexneri 2a str. 2457T	1076588
NP_835892.1	CDS	htrA	NC_004741.1	172030	173454	D	protease Do; required at high temperature; degrades damaged proteins; serine endoprotease	172030..173454	Shigella flexneri 2a str. 2457T	1076589
NP_835893.1	CDS	yaeH	NC_004741.1	174854	175240	R	residues 1 to 128 of 128 are 100.00 pct identical to residues 1 to 128 of 128 from Escherichia coli K-12 : B0163; hypothetical protein	complement(174854..175240)	Shigella flexneri 2a str. 2457T	1076591
NP_835894.1	CDS	dapD	NC_004741.1	175554	176378	R	catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase	complement(175554..176378)	Shigella flexneri 2a str. 2457T	1076592
NP_835895.1	CDS	glnD	NC_004741.1	176409	179081	R	catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; PII uridylyl-transferase	complement(176409..179081)	Shigella flexneri 2a str. 2457T	1076593
NP_835896.1	CDS	map	NC_004741.1	179143	179937	R	catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase	complement(179143..179937)	Shigella flexneri 2a str. 2457T	1076594
NP_835897.1	CDS	rpsB	NC_004741.1	180305	181030	D	one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2	180305..181030	Shigella flexneri 2a str. 2457T	1079387
NP_835898.1	CDS	tsf	NC_004741.1	181288	182139	D	EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts	181288..182139	Shigella flexneri 2a str. 2457T	1076595
NP_835899.1	CDS	pyrH	NC_004741.1	182286	183011	D	Catalyzes the phosphorylation of UMP to UDP; uridylate kinase	182286..183011	Shigella flexneri 2a str. 2457T	1076596
NP_835900.1	CDS	frr	NC_004741.1	183303	183860	D	Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor	183303..183860	Shigella flexneri 2a str. 2457T	1076597
NP_835901.1	CDS	yaeM	NC_004741.1	183952	185148	D	catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase	183952..185148	Shigella flexneri 2a str. 2457T	1076598
NP_835902.1	CDS	yaeS	NC_004741.1	185334	186095	D	catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate; undecaprenyl pyrophosphate synthase	185334..186095	Shigella flexneri 2a str. 2457T	1076661
NP_835903.2	CDS	cdsA	NC_004741.1	186108	186965	D	catalyzes the synthesis of CDP-diglyceride from CTP and phosphatidate; CDP-diglyceride synthase	186108..186965	Shigella flexneri 2a str. 2457T	1076599
NP_835904.1	CDS	yaeL	NC_004741.1	186977	188329	D	catalyzes the cleavage of RseA which activates the sigmaE-mediated stress response; zinc metallopeptidase RseP	186977..188329	Shigella flexneri 2a str. 2457T	1079703
NP_835905.1	CDS	yaeT	NC_004741.1	188359	190791	D	part of a complex with YfgL, YfiO, and NlpB involved in outer membrane protein biosynthesis; involved in the assembly of outer membrane proteins; outer membrane protein assembly factor YaeT	188359..190791	Shigella flexneri 2a str. 2457T	1080985
NP_835906.1	CDS	hlpA	NC_004741.1	190913	191398	D	residues 1 to 161 of 161 are 89.44 pct identical to residues 1 to 161 of 161 from Escherichia coli K-12 : B0178; located in outer membrane or nucleoid; periplasmic chaperone	190913..191398	Shigella flexneri 2a str. 2457T	1076600
NP_835907.1	CDS	lpxD	NC_004741.1	191402	192427	D	adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	191402..192427	Shigella flexneri 2a str. 2457T	1076601
NP_835908.1	CDS	fabZ	NC_004741.1	192532	192987	D	in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase	192532..192987	Shigella flexneri 2a str. 2457T	1080987
NP_835909.1	CDS	lpxA	NC_004741.1	192991	193779	D	catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase	192991..193779	Shigella flexneri 2a str. 2457T	1080989
NP_835910.1	CDS	lpxB	NC_004741.1	193779	194927	D	catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; lipid-A-disaccharide synthase	193779..194927	Shigella flexneri 2a str. 2457T	1076602
NP_835911.1	CDS	rnhB	NC_004741.1	194924	195520	D	RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII	194924..195520	Shigella flexneri 2a str. 2457T	1076604
NP_835912.1	CDS	dnaE	NC_004741.1	195557	199039	D	catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha	195557..199039	Shigella flexneri 2a str. 2457T	1076605
NP_835913.1	CDS	accA	NC_004741.1	199052	200011	D	catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha	199052..200011	Shigella flexneri 2a str. 2457T	1076606
NP_835914.1	CDS	ldcC	NC_004741.1	200110	202251	D	residues 1 to 713 of 713 are 99.15 pct identical to residues 1 to 713 of 713 from Escherichia coli K-12 : B0186; lysine decarboxylase 2	200110..202251	Shigella flexneri 2a str. 2457T	1076607
NP_835915.2	CDS	yaeR	NC_004741.1	202308	202697	D	residues 1 to 138 of 138 are 89.13 pct identical to residues 1 to 138 of 138 from Escherichia coli K-12 : B0187; hypothetical protein	202308..202697	Shigella flexneri 2a str. 2457T	1079983
NP_835916.1	CDS	tilS	NC_004741.1	202762	204060	D	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU; ATP-dependent; responsible for modifying the wobble-base of the CAU anticodon of tRNAIle such that it exhibits proper recognition of the AUA codon rather than the AUG codon and is in turn properly recognized by isoleucyl-tRNA synthetase; tRNA(Ile)-lysidine synthetase	202762..204060	Shigella flexneri 2a str. 2457T	1076608
NP_835917.1	CDS	yaeO	NC_004741.1	204109	204369	R	Suppresses temperature-sensitive mutations in essential genes by modulating rho-dependent transcription termination; Rho-binding antiterminator	complement(204109..204369)	Shigella flexneri 2a str. 2457T	1076609
NP_835918.1	CDS	yaeQ	NC_004741.1	204722	205267	D	residues 1 to 181 of 181 are 100.00 pct identical to residues 1 to 181 of 181 from Escherichia coli K-12 : B0190; hypothetical protein	204722..205267	Shigella flexneri 2a str. 2457T	1076610
NP_835919.1	CDS	yaeJ	NC_004741.1	205264	205686	D	residues 1 to 140 of 140 are 97.14 pct identical to residues 1 to 140 of 140 from Escherichia coli K-12 : B0191; peptidyl-tRNA hydrolase domain protein	205264..205686	Shigella flexneri 2a str. 2457T	1076611
NP_835920.1	CDS	cutF	NC_004741.1	205700	206410	D	residues 1 to 236 of 236 are 98.30 pct identical to residues 1 to 236 of 236 from Escherichia coli K-12 : B0192; lipoprotein involved with copper homeostasis and adhesion	205700..206410	Shigella flexneri 2a str. 2457T	1076612
NP_835921.1	CDS	yaeF	NC_004741.1	206565	207389	R	residues 1 to 274 of 274 are 94.89 pct identical to residues 19 to 292 of 292 from Escherichia coli K-12 : B0193; hypothetical protein	complement(206565..207389)	Shigella flexneri 2a str. 2457T	1076613
NP_835922.1	CDS	proS	NC_004741.1	207442	209160	R	catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase	complement(207442..209160)	Shigella flexneri 2a str. 2457T	1076614
NP_835923.1	CDS	yaeB	NC_004741.1	209271	209978	R	residues 1 to 235 of 235 are 92.76 pct identical to residues 1 to 235 of 235 from Escherichia coli K-12 : B0195; hypothetical protein	complement(209271..209978)	Shigella flexneri 2a str. 2457T	1076615
NP_835924.1	CDS	rcsF	NC_004741.1	209975	210379	R	residues 1 to 134 of 134 are 85.82 pct identical to residues 1 to 134 of 134 from Escherichia coli K-12 : B0196; involved in colanic acid synthesis; interacts with RcsB; outer membrane lipoprotein	complement(209975..210379)	Shigella flexneri 2a str. 2457T	1076617
NP_835925.1	CDS	metQ	NC_004741.1	210497	211312	R	residues 1 to 271 of 271 are 94.83 pct identical to residues 1 to 271 of 271 from Escherichia coli K-12 : B0197; DL-methionine transporter substrate-binding subunit	complement(210497..211312)	Shigella flexneri 2a str. 2457T	1076620
NP_835926.1	CDS	yaeE	NC_004741.1	211352	212005	R	part of the MetNIQ methionine uptake system; DL-methionine transporter permease subunit	complement(211352..212005)	Shigella flexneri 2a str. 2457T	1076622
NP_835927.1	CDS	metN	NC_004741.1	211998	213029	R	part of the metNIQ transport system for methionine; DL-methionine transporter ATP-binding subunit	complement(211998..213029)	Shigella flexneri 2a str. 2457T	1077808
NP_835928.1	CDS	yaeD	NC_004741.1	213217	213792	D	Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate; D,D-heptose 1,7-bisphosphate phosphatase	213217..213792	Shigella flexneri 2a str. 2457T	1076623
NP_835929.1	CDS	dkgB	NC_004741.1	219551	220354	D	catalyzes the reduction of 2,5-diketo-D-gluconic acid to 2-keto-L-gulonic acid; 2,5-diketo-D-gluconate reductase B	219551..220354	Shigella flexneri 2a str. 2457T	1076632
NP_835930.1	CDS	S0201	NC_004741.1	220393	221721	R	residues 1 to 442 of 442 are 99.77 pct identical to residues 7 to 448 of 448 from GenPept : >gb|AAK18333.1|AF348706_22 (AF348706) IS4 orf [Shigella flexneri]; IS4 orf	complement(220393..221721)	Shigella flexneri 2a str. 2457T	1078798
NP_835931.1	CDS	yafC	NC_004741.1	221789	222703	R	residues 1 to 301 of 304 are 98.67 pct identical to residues 1 to 301 of 304 from Escherichia coli K-12 : B0208; transcriptional regulator LYSR-type	complement(221789..222703)	Shigella flexneri 2a str. 2457T	1076633
NP_835932.1	CDS	yafD	NC_004741.1	222944	223744	D	residues 1 to 266 of 266 are 100.00 pct identical to residues 1 to 266 of 266 from Escherichia coli K-12 : B0209; hypothetical protein	222944..223744	Shigella flexneri 2a str. 2457T	1076636
NP_835933.1	CDS	yafE	NC_004741.1	223972	224592	D	residues 2 to 206 of 206 are 93.65 pct identical to residues 3 to 207 of 207 from Escherichia coli K-12 : B0210; biotin synthesis protein	223972..224592	Shigella flexneri 2a str. 2457T	1078831
NP_835934.1	CDS	mltD	NC_004741.1	224640	225986	R	catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues; may play a role in recycling muropeptides during cell division and/or cell elongation; in Helicobacter pylori MltD is a endolytic transglycosylase involved mainly in the rearrangement of the peptidoglycan layer of the bacterial cell wall; membrane-bound lytic murein transglycosylase D	complement(224640..225986)	Shigella flexneri 2a str. 2457T	1076635
NP_835935.1	CDS	gloB	NC_004741.1	226058	226813	R	catalyzes the hydrolysis of S-D-lactoylglutathione to D-lactic acid and reduced glutathione; plays an important role in cellular detoxification using glutathione; hydroxyacylglutathione hydrolase	complement(226058..226813)	Shigella flexneri 2a str. 2457T	1076639
NP_835936.1	CDS	yafS	NC_004741.1	226844	227569	D	residues 1 to 246 of 246 are 98.37 pct identical to residues 1 to 246 of 246 from Escherichia coli K-12 : B0213; hypothetical protein	226844..227569	Shigella flexneri 2a str. 2457T	1076640
NP_835937.1	CDS	rnhA	NC_004741.1	227566	228033	R	An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease H	complement(227566..228033)	Shigella flexneri 2a str. 2457T	1078814
NP_835938.1	CDS	dnaQ	NC_004741.1	228098	228829	D	3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon	228098..228829	Shigella flexneri 2a str. 2457T	1076650
NP_835939.1	CDS	safA	NC_004741.1	229169	230215	R	residues 1 to 348 of 348 are 68.66 pct identical to residues 1 to 351 of 351 from GenPept : >gb|AAL19222.1| (AE008707)  cytoplasmic protein [Salmonella typhimurium LT2]; hypothetical protein	complement(229169..230215)	Shigella flexneri 2a str. 2457T	1078803
NP_835940.1	CDS	S0212	NC_004741.1	230226	230339	R	residues 1 to 37 of 37 are 86.48 pct identical to residues 154 to 190 of 331 from GenPept : >gb|AAL19223.1| (AE008707)  cytoplasmic protein [Salmonella typhimurium LT2]; hypothetical protein	complement(230226..230339)	Shigella flexneri 2a str. 2457T	1080072
NP_835941.1	CDS	safB	NC_004741.1	230483	230788	R	residues 1 to 100 of 101 are 79.00 pct identical to residues 1 to 100 of 331 from GenPept : >gb|AAL19223.1| (AE008707)  cytoplasmic protein [Salmonella typhimurium LT2]; periplasmic chaperone of fimbral assembly machinery	complement(230483..230788)	Shigella flexneri 2a str. 2457T	1076643
NP_835942.1	CDS	safC	NC_004741.1	230785	232668	R	residues 1 to 627 of 627 are 91.54 pct identical to residues 1 to 627 of 627 from GenPept : >gb|AAL19224.1| (AE008707)  cytoplasmic protein [Salmonella typhimurium LT2]; outer membrane usher protein	complement(230785..232668)	Shigella flexneri 2a str. 2457T	1076644
NP_835943.1	CDS	S0215	NC_004741.1	232684	233178	R	residues 1 to 164 of 164 are 78.65 pct identical to residues 1 to 164 of 164 from GenPept : >emb|CAD08723.1| (AL627266) conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi]; hypothetical protein	complement(232684..233178)	Shigella flexneri 2a str. 2457T	1076651
NP_835944.1	CDS	sat1	NC_004741.1	233373	234005	R	residues 1 to 210 of 210 are 69.99 pct identical to residues 1 to 208 of 274 from GenPept : >gb|AAL19226.1| (AE008707)  cytoplasmic protein [Salmonella typhimurium LT2]; hypothetical protein	complement(233373..234005)	Shigella flexneri 2a str. 2457T	1076652
NP_835945.1	CDS	sat2	NC_004741.1	233992	234369	R	residues 6 to 124 of 125 are 56.66 pct identical to residues 180 to 299 of 300 from GenPept : >gb|AAL19227.1| (AE008707)  cytoplasmic protein [Salmonella typhimurium LT2]; hypothetical protein	complement(233992..234369)	Shigella flexneri 2a str. 2457T	1078828
NP_835946.1	CDS	S0219	NC_004741.1	234607	234906	R	residues 7 to 99 of 99 are 61.29 pct identical to residues 6 to 97 of 300 from GenPept : >gb|AAL19227.1| (AE008707)  cytoplasmic protein [Salmonella typhimurium LT2]; hypothetical protein	complement(234607..234906)	Shigella flexneri 2a str. 2457T	1076634
NP_835947.1	CDS	S0220	NC_004741.1	234959	235369	D	IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats; insertion sequence 2 OrfA protein	234959..235369	Shigella flexneri 2a str. 2457T	1076654
NP_835948.1	CDS	S0221	NC_004741.1	235327	236232	D	IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats; insertion element IS2 transposase InsD	235327..236232	Shigella flexneri 2a str. 2457T	1076656
NP_835949.1	CDS	S0223	NC_004741.1	236654	236956	D	residues 1 to 100 of 100 are 99.00 pct identical to residues 13 to 112 of 112 from GenPept : >gb|AAL72382.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS911 orfA	236654..236956	Shigella flexneri 2a str. 2457T	1076657
NP_835950.1	CDS	S0224	NC_004741.1	236983	237822	D	residues 19 to 297 of 297 are 99.28 pct identical to residues 1 to 279 of 279 from GenPept : >gb|AAL72449.1| (AF386526) InsB [Shigella flexneri 2a]; IS911 orfB	236983..237822	Shigella flexneri 2a str. 2457T	1076660
NP_835952.1	CDS	S0229	NC_004741.1	238511	238780	R	residues 1 to 89 of 89 are 96.62 pct identical to residues 89 to 177 of 177 from GenPept : >gb|AAC74627.1| (AE000252)  lysozyme [Escherichia coli K12]; endolysin R of prophage CP-933V	complement(238511..238780)	Shigella flexneri 2a str. 2457T	1076663
NP_835953.1	CDS	S0230	NC_004741.1	239101	239415	R	residues 1 to 99 of 104 are 64.64 pct identical to residues 1 to 93 of 103 from GenPept : >gb|AAC74628.1| (AE000252) orf, hypothetical protein [Escherichia coli K12]; hypothetical protein	complement(239101..239415)	Shigella flexneri 2a str. 2457T	1078781
NP_835954.1	CDS	S0231	NC_004741.1	239420	239635	R	residues 1 to 71 of 71 are 97.18 pct identical to residues 1 to 71 of 71 from GenPept : >gb|AAA32349.1| (M65239) S [Bacteriophage 21]; lysis protein S	complement(239420..239635)	Shigella flexneri 2a str. 2457T	1078780
NP_835955.1	CDS	S0232	NC_004741.1	239992	240366	D	no significant similarities; hypothetical protein	239992..240366	Shigella flexneri 2a str. 2457T	1076666
NP_835956.1	CDS	S0233	NC_004741.1	240390	240797	R	residues 7 to 126 of 135 are 29.83 pct identical to residues 203 to 324 of 327 from GenPept : >emb|CAD02863.1| (AL627277) hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi]; hypothetical protein	complement(240390..240797)	Shigella flexneri 2a str. 2457T	1076668
NP_835957.1	CDS	S0235	NC_004741.1	240794	241846	R	residues 72 to 350 of 350 are 99.64 pct identical to residues 1 to 279 of 279 from GenPept : >gb|AAL72449.1| (AF386526) InsB [Shigella flexneri 2a]; IS911 orfA	complement(240794..241846)	Shigella flexneri 2a str. 2457T	1076665
NP_835958.1	CDS	S0234	NC_004741.1	240794	241633	R	residues 19 to 297 of 297 are 99.64 pct identical to residues 1 to 279 of 279 from GenPept : >gb|AAL72449.1| (AF386526) InsB [Shigella flexneri 2a]; IS911 orfB	complement(240794..241633)	Shigella flexneri 2a str. 2457T	1076669
NP_835959.1	CDS	S0236	NC_004741.1	242170	242730	D	residues 1 to 184 of 186 are 89.67 pct identical to residues 200 to 383 of 499 from GenPept : >gb|AAF75044.1| (AF217253) terminase large subunit [Enterobacteria phage P22]; terminase large subunit	242170..242730	Shigella flexneri 2a str. 2457T	1078818
NP_835960.1	CDS	S0237	NC_004741.1	242699	243073	D	residues 7 to 99 of 124 are 82.79 pct identical to residues 382 to 474 of 499 from GenPept : >gb|AAF75044.1| (AF217253) terminase large subunit [Enterobacteria phage P22]; terminase large subunit	242699..243073	Shigella flexneri 2a str. 2457T	1076681
NP_835961.1	CDS	S0238	NC_004741.1	243074	245239	D	residues 1 to 721 of 721 are 72.48 pct identical to residues 1 to 725 of 725 from GenPept : >gb|AAF75045.1| (AF217253) portal protein [Enterobacteria phage P22]; packaging glycoprotein	243074..245239	Shigella flexneri 2a str. 2457T	1076671
NP_835962.1	CDS	S0239	NC_004741.1	245253	246164	D	residues 1 to 303 of 303 are 79.27 pct identical to residues 1 to 303 of 303 from GenPept : >gb|AAF75046.1| (AF217253) scaffolding protein [Enterobacteria phage P22]; scaffolding protein	245253..246164	Shigella flexneri 2a str. 2457T	1076672
NP_835963.1	CDS	S0240	NC_004741.1	246164	247459	D	residues 1 to 431 of 431 are 72.62 pct identical to residues 1 to 430 of 430 from GenPept : >gb|AAF75047.1| (AF217253) coat protein [Enterobacteria phage P22]; coat protein	246164..247459	Shigella flexneri 2a str. 2457T	1076673
NP_835964.1	CDS	S0241	NC_004741.1	247504	247734	D	no significant similarities; hypothetical protein	247504..247734	Shigella flexneri 2a str. 2457T	1078862
NP_835965.1	CDS	S0242	NC_004741.1	247712	248212	D	residues 1 to 163 of 166 are 60.12 pct identical to residues 1 to 157 of 166 from GenPept : >gb|AAF75049.1| (AF217253) DNA stabilization protein [Enterobacteria phage P22]; DNA stabilization protein	247712..248212	Shigella flexneri 2a str. 2457T	1076695
NP_835966.1	CDS	S0243	NC_004741.1	248212	249630	D	residues 1 to 472 of 472 are 98.72 pct identical to residues 1 to 472 of 472 from GenPept : >gb|AAK28897.1|AF335538_49 (AF335538) DNA stabilization protein [Bacteriophage HK620]; packaged DNA stabilization protein	248212..249630	Shigella flexneri 2a str. 2457T	1076674
NP_835967.1	CDS	S0244	NC_004741.1	249630	250478	D	residues 96 to 282 of 282 are 87.16 pct identical to residues 3 to 189 of 189 from GenPept : >gb|AAG57480.1|AE005466_10 (AE005466) Z3617 gene product [Escherichia coli O157:H7 EDL933]; packaged DNA stabilization protein	249630..250478	Shigella flexneri 2a str. 2457T	1080087
NP_835968.1	CDS	S0245	NC_004741.1	250478	250933	D	residues 1 to 151 of 151 are 98.67 pct identical to residues 1 to 151 of 151 from GenPept : >gb|AAK28899.1|AF335538_51 (AF335538) head assembly protein [Bacteriophage HK620]; head assembly protein	250478..250933	Shigella flexneri 2a str. 2457T	1078779
NP_835969.1	CDS	S0246	NC_004741.1	250936	251628	D	residues 1 to 230 of 230 are 52.60 pct identical to residues 1 to 230 of 230 from GenPept : >gb|AAK28900.1|AF335538_52 (AF335538) DNA transfer protein [Bacteriophage HK620]; DNA transfer protein	250936..251628	Shigella flexneri 2a str. 2457T	1076675
NP_835970.1	CDS	S0247	NC_004741.1	251638	252969	D	residues 1 to 216 of 443 are 57.79 pct identical to residues 1 to 215 of 378 from GenPept : >gb|AAG57477.1|AE005466_7 (AE005466)  prophage DNA injection protein [Escherichia coli O157:H7 EDL933]; prophage DNA injection protein	251638..252969	Shigella flexneri 2a str. 2457T	1076677
NP_835971.1	CDS	S0248	NC_004741.1	252970	254700	D	residues 217 to 348 of 576 are 76.35 pct identical to residues 60 to 207 of 722 from GenPept : >gb|AAK28902.1|AF335538_54 (AF335538) DNA transfer protein [Bacteriophage HK620]; DNA transfer protein	252970..254700	Shigella flexneri 2a str. 2457T	1076678
NP_835972.1	CDS	S0249	NC_004741.1	254826	255152	D	residues 1 to 108 of 108 are 74.07 pct identical to residues 1 to 108 of 108 from GenPept : >gb|AAL72412.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS629 orfA	254826..255152	Shigella flexneri 2a str. 2457T	1076679
NP_835973.1	CDS	S0250	NC_004741.1	255387	256034	D	residues 1 to 215 of 215 are 98.13 pct identical to residues 8 to 222 of 222 from GenPept : >gb|AAL72361.1| (AF386526) transposase [Shigella flexneri 2a]; IS629 orfB	255387..256034	Shigella flexneri 2a str. 2457T	1076680
NP_835974.1	CDS	psiF	NC_004741.1	256085	256423	R	residues 1 to 112 of 112 are 83.92 pct identical to residues 1 to 112 of 112 from Escherichia coli K-12 : B0384; hypothetical protein	complement(256085..256423)	Shigella flexneri 2a str. 2457T	1076683
NP_835975.1	CDS	phoA	NC_004741.1	256524	258008	R	residues 1 to 487 of 487 are 96.71 pct identical to residues 8 to 494 of 494 from Escherichia coli K-12 : B0383; alkaline phosphatase	complement(256524..258008)	Shigella flexneri 2a str. 2457T	1076684
NP_835976.1	CDS	yaiB	NC_004741.1	258040	258300	R	residues 1 to 86 of 86 are 98.83 pct identical to residues 1 to 86 of 86 from Escherichia coli K-12 : B0382; hypothetical protein	complement(258040..258300)	Shigella flexneri 2a str. 2457T	1076685
NP_835977.1	CDS	ddl	NC_004741.1	258763	259857	D	D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanyl-alanine synthetase A	258763..259857	Shigella flexneri 2a str. 2457T	1076687
NP_835978.1	CDS	S0255	NC_004741.1	259881	260225	R	residues 1 to 114 of 114 are 97.36 pct identical to residues 1 to 114 of 114 from Escherichia coli K-12 : B0380; hypothetical protein	complement(259881..260225)	Shigella flexneri 2a str. 2457T	1076688
NP_835979.1	CDS	S0256	NC_004741.1	260353	260661	D	residues 1 to 102 of 102 are 99.01 pct identical to residues 1 to 102 of 102 from Escherichia coli K-12 : B0379; hypothetical protein	260353..260661	Shigella flexneri 2a str. 2457T	1076689
NP_835980.1	CDS	yaiW	NC_004741.1	260720	261814	R	residues 1 to 364 of 364 are 95.05 pct identical to residues 1 to 364 of 364 from Escherichia coli K-12 : B0378; hypothetical protein	complement(260720..261814)	Shigella flexneri 2a str. 2457T	1076690
NP_835981.1	CDS	sbmA	NC_004741.1	261827	263047	R	in Escherichia coli SbmA is involved in uptake of microcin J25; functions along with FhuA, TonB, and ExbB/D in this capacity; in Sinorhizobium meliloti, BacA is essential and required for symbiosis; defects appear to affect the cell envelope; transporter	complement(261827..263047)	Shigella flexneri 2a str. 2457T	1076691
NP_835982.1	CDS	yaiH	NC_004741.1	263399	264556	D	this protein has no known enzymatic function; beta-lactam binding protein AmpH	263399..264556	Shigella flexneri 2a str. 2457T	1076692
NP_835983.1	CDS	S0262	NC_004741.1	265695	266507	R	residues 1 to 270 of 270 are 95.92 pct identical to residues 10 to 279 of 279 from GenPept : >gb|AAG53988.1|AF327445_2 (AF327445)  transposase B [Pantoea agglomerans]; ISEhe3 orfB	complement(265695..266507)	Shigella flexneri 2a str. 2457T	1076696
NP_835984.1	CDS	S0263	NC_004741.1	266781	267494	R	residues 1 to 237 of 237 are 91.13 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAL72453.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS600 orfB	complement(266781..267494)	Shigella flexneri 2a str. 2457T	1077596
NP_835985.1	CDS	is600a	NC_004741.1	267635	267937	R	residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAL72452.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS600 orfA	complement(267635..267937)	Shigella flexneri 2a str. 2457T	1077611
NP_835986.2	CDS	yi22_6	NC_004741.1	268714	269619	R	IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats; insertion element IS2 transposase InsD	complement(268714..269619)	Shigella flexneri 2a str. 2457T	1077812
NP_835987.2	CDS	yi21_6	NC_004741.1	269577	269942	R	IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats; insertion sequence 2 OrfA protein	complement(269577..269942)	Shigella flexneri 2a str. 2457T	1076699
NP_835988.1	CDS	S0269	NC_004741.1	270487	270756	D	residues 1 to 89 of 89 are 80.89 pct identical to residues 1 to 89 of 89 from Escherichia coli K-12 : B0370; hypothetical protein	270487..270756	Shigella flexneri 2a str. 2457T	1076700
NP_835989.1	CDS	hemB	NC_004741.1	270893	271900	D	catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase	270893..271900	Shigella flexneri 2a str. 2457T	1076701
NP_835990.1	CDS	tauD	NC_004741.1	272006	272857	R	catalyzes the conversion of taurine (2-aminoethanesulfonate) to sulfite and aminoacetaldehyde concurrently with the conversion of alpha-ketoglutarate to succinate and carbon dioxide; non-heme iron oxidase; allows the use of taurine as an alternative sulfur source; forms homodimers; taurine dioxygenase	complement(272006..272857)	Shigella flexneri 2a str. 2457T	1076702
NP_835991.1	CDS	tauC	NC_004741.1	272854	273681	R	residues 1 to 275 of 275 are 90.54 pct identical to residues 1 to 275 of 275 from Escherichia coli K-12 : B0367; taurine transporter subunit	complement(272854..273681)	Shigella flexneri 2a str. 2457T	1077158
NP_835992.1	CDS	tauB	NC_004741.1	273678	274445	R	Part of the ABC transporter complex tauABC involved in taurine import; taurine transporter ATP-binding subunit	complement(273678..274445)	Shigella flexneri 2a str. 2457T	1076703
NP_835993.1	CDS	tauA	NC_004741.1	274458	275354	R	with TauB and TauC is responsible for taurine uptake.; taurine transporter substrate binding subunit	complement(274458..275354)	Shigella flexneri 2a str. 2457T	1076704
NP_835994.1	CDS	S0275	NC_004741.1	275912	276415	R	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri]; IS1 orfB	complement(275912..276415)	Shigella flexneri 2a str. 2457T	1076705
NP_835995.1	CDS	S0276	NC_004741.1	276334	276609	R	residues 1 to 91 of 91 are 98.90 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(276334..276609)	Shigella flexneri 2a str. 2457T	1076706
NP_835996.1	CDS	ykgH	NC_004741.1	276754	277422	D	residues 1 to 222 of 222 are 97.29 pct identical to residues 1 to 222 of 222 from Escherichia coli K-12 : B0310; hypothetical protein	276754..277422	Shigella flexneri 2a str. 2457T	1076707
NP_835997.1	CDS	S0278	NC_004741.1	277498	277710	D	residues 1 to 70 of 70 are 72.85 pct identical to residues 1 to 70 of 70 from Escherichia coli K-12 : B0309; hypothetical protein	277498..277710	Shigella flexneri 2a str. 2457T	1076709
NP_835998.2	CDS	ykgG	NC_004741.1	277665	278360	R	residues 1 to 280 of 280 are 94.64 pct identical to residues 3 to 282 of 282 from Escherichia coli K-12 : B0308; transporter	complement(277665..278360)	Shigella flexneri 2a str. 2457T	1076710
NP_835999.1	CDS	ykgF	NC_004741.1	278353	279780	R	residues 1 to 475 of 475 are 99.36 pct identical to residues 1 to 475 of 475 from Escherichia coli K-12 : B0307; hypothetical protein	complement(278353..279780)	Shigella flexneri 2a str. 2457T	1076711
NP_836000.1	CDS	ykgE	NC_004741.1	279791	280510	R	residues 1 to 239 of 239 are 98.74 pct identical to residues 1 to 239 of 239 from Escherichia coli K-12 : B0306; dehydrogenase subunit	complement(279791..280510)	Shigella flexneri 2a str. 2457T	1076712
NP_836001.1	CDS	S0282	NC_004741.1	280929	281204	D	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	280929..281204	Shigella flexneri 2a str. 2457T	1076697
NP_836002.1	CDS	S0283	NC_004741.1	281123	281626	D	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri]; IS1 orfB	281123..281626	Shigella flexneri 2a str. 2457T	1076713
NP_836003.1	CDS	rhsG	NC_004741.1	282704	284917	D	residues 1 to 734 of 737 are 80.92 pct identical to residues 1 to 729 of 729 from GenPept : >emb|CAD08749.1| (AL627266) Rhs-family protein [Salmonella enterica subsp. enterica serovar Typhi]; Rhs-family protein	282704..284917	Shigella flexneri 2a str. 2457T	1076714
NP_836004.1	CDS	S0285	NC_004741.1	284940	285140	D	residues 5 to 64 of 66 are 78.33 pct identical to residues 5 to 64 of 148 from GenPept : >gb|AAL19247.1| (AE008708)  cytoplasmic protein [Salmonella typhimurium LT2]; hypothetical protein	284940..285140	Shigella flexneri 2a str. 2457T	1076715
NP_836005.1	CDS	S0286	NC_004741.1	285197	285385	D	residues 1 to 62 of 62 are 67.74 pct identical to residues 86 to 147 of 148 from GenPept : >gb|AAL19247.1| (AE008708)  cytoplasmic protein [Salmonella typhimurium LT2]; hypothetical protein	285197..285385	Shigella flexneri 2a str. 2457T	1076716
NP_836006.1	CDS	S0287	NC_004741.1	285407	285814	D	residues 1 to 127 of 135 are 68.50 pct identical to residues 1 to 127 of 1354 from GenPept : >emb|CAD08751.1| (AL627266) Rhs-family protein [Salmonella enterica subsp. enterica serovar Typhi]; Rhs-family protein	285407..285814	Shigella flexneri 2a str. 2457T	1076717
NP_836007.1	CDS	rhsD	NC_004741.1	285811	288099	D	residues 1 to 759 of 762 are 69.22 pct identical to residues 137 to 954 of 1364 from GenPept : >gb|AAL19248.1| (AE008708)  RHS-family protein [Salmonella typhimurium LT2]; Rhs-family protein	285811..288099	Shigella flexneri 2a str. 2457T	1076718
NP_836008.1	CDS	rhs-like	NC_004741.1	288096	289085	D	residues 1 to 291 of 329 are 78.76 pct identical to residues 961 to 1252 of 1354 from GenPept : >emb|CAD08751.1| (AL627266) Rhs-family protein [Salmonella enterica subsp. enterica serovar Typhi]; Rhs-family protein	288096..289085	Shigella flexneri 2a str. 2457T	1076719
NP_836009.1	CDS	yafV	NC_004741.1	290134	290904	R	residues 1 to 256 of 256 are 98.04 pct identical to residues 1 to 256 of 256 from Escherichia coli K-12 : B0219; hypothetical protein	complement(290134..290904)	Shigella flexneri 2a str. 2457T	1076720
NP_836010.1	CDS	ykfE	NC_004741.1	291058	291531	D	inactivates vertebrate C-type lysozyme; C-lysozyme inhibitor	291058..291531	Shigella flexneri 2a str. 2457T	1076721
NP_836011.2	CDS	fadE	NC_004741.1	291574	294018	R	functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; acyl-CoA dehydrogenase	complement(291574..294018)	Shigella flexneri 2a str. 2457T	1076722
NP_836012.1	CDS	gmhA	NC_004741.1	294258	294836	D	catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate; phosphoheptose isomerase	294258..294836	Shigella flexneri 2a str. 2457T	1076723
NP_836013.1	CDS	yafJ	NC_004741.1	295042	295809	D	residues 1 to 255 of 255 are 99.60 pct identical to residues 1 to 255 of 255 from Escherichia coli K-12 : B0223; amidotransferase	295042..295809	Shigella flexneri 2a str. 2457T	1076724
NP_836014.1	CDS	yafK	NC_004741.1	295780	296520	R	residues 1 to 246 of 246 are 99.59 pct identical to residues 1 to 246 of 246 from Escherichia coli K-12 : B0224; hypothetical protein	complement(295780..296520)	Shigella flexneri 2a str. 2457T	1076725
NP_836015.1	CDS	yafL	NC_004741.1	296871	297425	D	residues 10 to 184 of 184 are 96.57 pct identical to residues 75 to 249 of 249 from Escherichia coli K-12 : B0227; lipoprotein	296871..297425	Shigella flexneri 2a str. 2457T	1076726
NP_836016.1	CDS	yafM	NC_004741.1	297601	298098	D	residues 1 to 164 of 165 are 94.51 pct identical to residues 1 to 164 of 165 from Escherichia coli K-12 : B0228; hypothetical protein	297601..298098	Shigella flexneri 2a str. 2457T	1076728
NP_836017.1	CDS	fhiA	NC_004741.1	298315	300054	R	residues 1 to 579 of 579 are 89.81 pct identical to residues 1 to 579 of 579 from Escherichia coli K-12 : B0229; flagellar biosynthetic protein FlhA	complement(298315..300054)	Shigella flexneri 2a str. 2457T	1080038
NP_836018.1	CDS	mbhA	NC_004741.1	299999	300784	D	residues 1 to 261 of 261 are 98.46 pct identical to residues 1 to 261 of 261 from Escherichia coli K-12 : B0230; hypothetical protein	299999..300784	Shigella flexneri 2a str. 2457T	1076729
NP_836019.1	CDS	dinP	NC_004741.1	300855	301910	D	involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV	300855..301910	Shigella flexneri 2a str. 2457T	1076730
NP_836020.1	CDS	yafN	NC_004741.1	301962	302255	D	residues 1 to 97 of 97 are 98.96 pct identical to residues 1 to 97 of 97 from Escherichia coli K-12 : B0232; antitoxin of the YafO-YafN toxin-antitoxin system	301962..302255	Shigella flexneri 2a str. 2457T	1076731
NP_836021.1	CDS	yafO	NC_004741.1	302258	302656	D	YafO overproduction induces toxicity; it is believed to be the toxin of a toxin-antitoxin pair; unknown function; toxin YafO	302258..302656	Shigella flexneri 2a str. 2457T	1076732
NP_836022.1	CDS	yafP	NC_004741.1	302666	303118	D	residues 1 to 150 of 150 are 91.33 pct identical to residues 1 to 150 of 150 from Escherichia coli K-12 : B0234; hypothetical protein	302666..303118	Shigella flexneri 2a str. 2457T	1076733
NP_836023.1	CDS	S0304	NC_004741.1	303364	304407	D	mutations in this gene result in a compromised ability for drug-inducible mexXY expression; expression is inducible by the same ribosome-targeting agents that induce mexXY; hypothetical protein	303364..304407	Shigella flexneri 2a str. 2457T	1076734
NP_836024.1	CDS	prfH	NC_004741.1	304523	304978	D	catalyzes the release of newly synthesized polypeptide chains at the stop codons UAA and UGA; peptide chain release factor 2	304523..304978	Shigella flexneri 2a str. 2457T	1076735
NP_836025.1	CDS	pepD	NC_004741.1	305140	306597	R	residues 1 to 485 of 485 are 96.08 pct identical to residues 1 to 485 of 485 from Escherichia coli K-12 : B0237; aminoacyl-histidine dipeptidase	complement(305140..306597)	Shigella flexneri 2a str. 2457T	1076736
NP_836026.1	CDS	gpt	NC_004741.1	306859	307317	D	catalyzes the conversion of guanine, xanthine and, to a lesser extent, hypoxanthine to GMP, XMP and IMP, respectively; xanthine-guanine phosphoribosyltransferase	306859..307317	Shigella flexneri 2a str. 2457T	1076737
NP_836027.1	CDS	frsA	NC_004741.1	307409	308653	D	forms a 1:1 complex with the unphosphorylated from of enzyme IIAGlc; FrsA may promote fermentation; fermentation/respiration switch protein	307409..308653	Shigella flexneri 2a str. 2457T	1076738
NP_836028.1	CDS	crl	NC_004741.1	308711	309112	D	involved in the expression of csgBA which is involved in curli formation; interacts with sigmaS; DNA-binding transcriptional regulator Crl	308711..309112	Shigella flexneri 2a str. 2457T	1076739
NP_836029.1	CDS	phoE	NC_004741.1	309151	310206	R	residues 1 to 351 of 351 are 99.71 pct identical to residues 1 to 351 of 351 from Escherichia coli K-12 : B0241; outer membrane phosphoporin protein E	complement(309151..310206)	Shigella flexneri 2a str. 2457T	1076740
NP_836030.1	CDS	S0311	NC_004741.1	310382	310657	D	residues 1 to 91 of 91 are 97.80 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	310382..310657	Shigella flexneri 2a str. 2457T	1076741
NP_836031.1	CDS	S0312	NC_004741.1	310576	311079	D	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri]; IS1 orfB	310576..311079	Shigella flexneri 2a str. 2457T	1076742
NP_836032.1	CDS	proB	NC_004741.1	311270	312373	D	catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase	311270..312373	Shigella flexneri 2a str. 2457T	1076743
NP_836033.1	CDS	proA	NC_004741.1	312385	313638	D	Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase	312385..313638	Shigella flexneri 2a str. 2457T	1076744
NP_836034.1	CDS	S0316	NC_004741.1	313843	315006	R	residues 1 to 387 of 387 are 98.19 pct identical to residues 1 to 387 of 387 from GenPept : >gb|AAB72135.1| (U82619) integrase [Shigella flexneri bacteriophage V]; phage integrase	complement(313843..315006)	Shigella flexneri 2a str. 2457T	1076746
NP_836035.1	CDS	S0317	NC_004741.1	315192	315494	D	residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAF09029.1| (AF139596) unknown [Shigella flexneri]; IS600 orfA	315192..315494	Shigella flexneri 2a str. 2457T	1076747
NP_836036.1	CDS	S0318	NC_004741.1	315635	316348	D	residues 1 to 237 of 237 are 91.13 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAK18576.1|AF348706_265 (AF348706) IS600 orfB [Shigella flexneri]; IS600 orfB	315635..316348	Shigella flexneri 2a str. 2457T	1076748
NP_836037.1	CDS	S0319	NC_004741.1	316401	317051	D	residues 1 to 216 of 216 are 90.74 pct identical to residues 1 to 216 of 216 from GenPept : >gb|AAB72130.2| (U82619) unknown [Shigella flexneri bacteriophage V]; hypothetical protein	316401..317051	Shigella flexneri 2a str. 2457T	1076749
NP_836038.1	CDS	S4801	NC_004741.1	316960	317421	D	residues 1 to 138 of 153 are 95.65 pct identical to residues 1 to 138 of 167 from Genpept : >gb|AAF09028.1| (AF139596) unknown [Shigella flexneri]; phage tail fibre protein	316960..317421	Shigella flexneri 2a str. 2457T	1080981
NP_836039.1	CDS	S4802	NC_004741.1	318229	319278	R	residues 17 to 137 of 349 are 28.12 pct identical to residues 7 to 129 of 337 from Genpept : >gb|AAK80982.1|AE007801_6 (AE007801) O-actetyl transferase related protein [Clostridium acetobutylicum]; hypothetical protein	complement(318229..319278)	Shigella flexneri 2a str. 2457T	1076750
NP_836040.1	CDS	S4808	NC_004741.1	319729	320919	D	residues 1 to 406 of 406 are 62.62 pct identical to residues 4 to 407 of 407 from NRprotein_Feb03 : >ref|NP_085189.1| IS10 orf [Shigella flexneri] gb|AAK18345.1|AF348706_34 IS10 orf [Shigella flexneri] gb|AAL72480.1| hypothetical protein [Shigella flexneri 2a]; hypothetical protein	319729..320919	Shigella flexneri 2a str. 2457T	1076751
NP_836041.1	CDS	gtrII	NC_004741.1	321309	322769	R	residues 1 to 486 of 486 are 81.68 pct identical to residues 1 to 486 of 486 from Genpept : >gb|AAC39273.1| (AF021347) glucosyl tranferase II [bacteriophage SfII]; glucosyl tranferase II	complement(321309..322769)	Shigella flexneri 2a str. 2457T	1076752
NP_836042.1	CDS	gtrBI	NC_004741.1	322766	323695	R	residues 1 to 309 of 309 are 94.82 pct identical to residues 1 to 309 of 309 from GenPept : >gb|AAC39272.1| (AF021347) bactoprenol glucosyl transferase [bacteriophage SfII]; bactoprenol glucosyl transferase	complement(322766..323695)	Shigella flexneri 2a str. 2457T	1076753
NP_836043.1	CDS	gtrAI	NC_004741.1	323692	324054	R	residues 1 to 120 of 120 are 89.99 pct identical to residues 1 to 120 of 120 from GenPept : >gb|AAB72134.1| (U82619)  flippase [Shigella flexneri bacteriophage V]; flippase	complement(323692..324054)	Shigella flexneri 2a str. 2457T	1076754
NP_836044.1	CDS	S0322	NC_004741.1	324316	324609	R	residues 1 to 97 of 97 are 100.00 pct identical to residues 290 to 386 of 386 from GenPept : >gb|AAD10295.1| (U82084) integrase [bacteriophage SfX]; integrase fragment	complement(324316..324609)	Shigella flexneri 2a str. 2457T	1076755
NP_836045.1	CDS	S0323	NC_004741.1	324718	325431	R	residues 1 to 237 of 237 are 91.13 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAK18576.1|AF348706_265 (AF348706) IS600 orfB [Shigella flexneri]; IS600 orfB	complement(324718..325431)	Shigella flexneri 2a str. 2457T	1076757
NP_836046.1	CDS	S0324	NC_004741.1	325572	325874	R	residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAL72452.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS600 orfA	complement(325572..325874)	Shigella flexneri 2a str. 2457T	1076758
NP_836047.1	CDS	S0325	NC_004741.1	326060	327223	D	residues 1 to 387 of 387 are 98.96 pct identical to residues 1 to 387 of 387 from GenPept : >gb|AAB72135.1| (U82619) integrase [Shigella flexneri bacteriophage V]; phage integrase	326060..327223	Shigella flexneri 2a str. 2457T	1076759
NP_836048.1	CDS	S4804	NC_004741.1	327572	328744	D	residues 39 to 379 of 390 are 28.05 pct identical to residues 15 to 359 of 397 from Genpept : >dbj|BAB50097.1| (AP003001) contains weak similarity to acetyltransferase [Mesorhizobium loti]; hypothetical protein	327572..328744	Shigella flexneri 2a str. 2457T	1076760
NP_836049.1	CDS	S0326	NC_004741.1	329548	329988	R	residues 1 to 146 of 146 are 99.31 pct identical to residues 127 to 272 of 272 from GenPept : >gb|AAK18576.1|AF348706_265 (AF348706) IS600 orfB [Shigella flexneri]; IS600 orfB	complement(329548..329988)	Shigella flexneri 2a str. 2457T	1076761
NP_836050.1	CDS	S0327	NC_004741.1	330729	331349	R	residues 1 to 206 of 206 are 100.00 pct identical to residues 1 to 206 of 206 from GenPept : >gb|AAD44736.1|AF141323_7 (AF141323) TnpC [Shigella flexneri]; IS629 orfB	complement(330729..331349)	Shigella flexneri 2a str. 2457T	1076762
NP_836051.1	CDS	S0328	NC_004741.1	331711	331929	R	residues 1 to 71 of 72 are 84.50 pct identical to residues 1 to 71 of 108 from GenPept : >gb|AAL72456.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS629, orfA	complement(331711..331929)	Shigella flexneri 2a str. 2457T	1077809
NP_836052.1	CDS	adrA	NC_004741.1	332080	333195	D	catalyzes the conversion of 2 GTP into c-di-GMP; adrA overexpression induces cellulose biosynthesis, cell adherence to abiotic surfaces and swimming and swarming motility; AdrA acts post-transcriptionally on the bcsABZC operon activating cellulose biosynthesis; diguanylate cyclase AdrA	332080..333195	Shigella flexneri 2a str. 2457T	1076603
NP_836053.1	CDS	proC	NC_004741.1	333212	334021	R	catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase	complement(333212..334021)	Shigella flexneri 2a str. 2457T	1076763
NP_836054.2	CDS	yaiI	NC_004741.1	334141	334599	D	residues 1 to 192 of 192 are 93.22 pct identical to residues 1 to 192 of 192 from Escherichia coli K-12 : B0387; hypothetical protein	334141..334599	Shigella flexneri 2a str. 2457T	1076764
NP_836055.1	CDS	aroL	NC_004741.1	334782	335306	D	type II enzyme similar to type I but differentially regulated and with a lower Km; catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase	334782..335306	Shigella flexneri 2a str. 2457T	1076765
NP_836056.1	CDS	yaiA	NC_004741.1	335356	335547	D	residues 1 to 63 of 63 are 100.00 pct identical to residues 1 to 63 of 63 from Escherichia coli K-12 : B0389; hypothetical protein	335356..335547	Shigella flexneri 2a str. 2457T	1076766
NP_836057.1	CDS	aroM	NC_004741.1	335805	336482	D	residues 1 to 225 of 225 are 100.00 pct identical to residues 1 to 225 of 225 from Escherichia coli K-12 : B0390; regulated by aroR; hypothetical protein	335805..336482	Shigella flexneri 2a str. 2457T	1076767
NP_836058.1	CDS	yaiE	NC_004741.1	336554	336838	D	residues 1 to 94 of 94 are 100.00 pct identical to residues 1 to 94 of 94 from Escherichia coli K-12 : B0391; hypothetical protein	336554..336838	Shigella flexneri 2a str. 2457T	1076768
NP_836059.1	CDS	S0336	NC_004741.1	337047	337328	D	residues 1 to 93 of 93 are 97.84 pct identical to residues 1 to 93 of 93 from Escherichia coli K-12 : B0392; hypothetical protein	337047..337328	Shigella flexneri 2a str. 2457T	1076769
NP_836060.1	CDS	S0337	NC_004741.1	337325	337780	D	ORF2; residues 1 to 144 of 151 are 99.30 pct identical to residues 1 to 144 of 149 from GenPept : >gb|AAG54739.1|AE005218_4 (AE005218) Z0491 gene product [Escherichia coli O157:H7 EDL933]; hypothetical protein	337325..337780	Shigella flexneri 2a str. 2457T	1076770
NP_836061.1	CDS	rdgC	NC_004741.1	337858	338769	R	Required for efficient pilin antigenic variation; recombination associated protein	complement(337858..338769)	Shigella flexneri 2a str. 2457T	1076772
NP_836062.2	CDS	yajF	NC_004741.1	338894	339787	D	catalyzes phosphorylation of fructose; cytosolic enzyme; fructokinase	338894..339787	Shigella flexneri 2a str. 2457T	1076773
NP_836063.1	CDS	araJ	NC_004741.1	339945	341126	R	member of the major facilitator superfamily (MFS) of transporters; unknown function; may be associated with transport or processing of arabinose polymers; MFS transport protein AraJ	complement(339945..341126)	Shigella flexneri 2a str. 2457T	1076774
NP_836064.1	CDS	sbcC	NC_004741.1	341252	344395	R	with SbcD cleaves DNA hairpin structures; also has 5' single-strand endonuclease activity; exonuclease subunit SbcC	complement(341252..344395)	Shigella flexneri 2a str. 2457T	1076775
NP_836065.1	CDS	sbcD	NC_004741.1	344392	345594	R	with SbcC cleaves DNA hairpin structure, also has 5' single-strand endonuclease activity; exonuclease subunit SbcD	complement(344392..345594)	Shigella flexneri 2a str. 2457T	1076776
NP_836066.1	CDS	phoB	NC_004741.1	345784	346473	D	two component response regulator for the phosphate regulon; PhoR phosphorylates PhoB; transcriptional regulator PhoB	345784..346473	Shigella flexneri 2a str. 2457T	1076777
NP_836067.1	CDS	phoR	NC_004741.1	346531	347826	D	membrane-associated histidine protein kinase that phosphorylates phoB in response to environmental signals as part of the two-component phosphate regulatory system phoR/phoB; phosphate regulon sensor protein	346531..347826	Shigella flexneri 2a str. 2457T	1076779
NP_836068.1	CDS	brnQ	NC_004741.1	348233	349552	D	residues 1 to 439 of 439 are 93.39 pct identical to residues 1 to 439 of 439 from Escherichia coli K-12 : B0401; branched-chain amino acid aminotransferase	348233..349552	Shigella flexneri 2a str. 2457T	1076780
NP_836069.1	CDS	proY	NC_004741.1	349628	351001	D	cryptic permease that may be involved in the transport of proline across the inner membrane; in Salmonella typhimurium, the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation; proline-specific permease	349628..351001	Shigella flexneri 2a str. 2457T	1076781
NP_836070.1	CDS	malZ	NC_004741.1	351157	352974	D	residues 1 to 605 of 605 are 98.84 pct identical to residues 1 to 605 of 605 from Escherichia coli K-12 : B0403; maltodextrin glucosidase	351157..352974	Shigella flexneri 2a str. 2457T	1076782
NP_836071.1	CDS	queA	NC_004741.1	353645	354715	D	Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine:tRNA ribosyltransferase-isomerase	353645..354715	Shigella flexneri 2a str. 2457T	1076784
NP_836072.1	CDS	tgt	NC_004741.1	354770	355897	D	Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase	354770..355897	Shigella flexneri 2a str. 2457T	1076785
NP_836073.1	CDS	yajC	NC_004741.1	355920	356252	D	member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC	355920..356252	Shigella flexneri 2a str. 2457T	1076786
NP_836074.1	CDS	secD	NC_004741.1	356280	358127	D	part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD	356280..358127	Shigella flexneri 2a str. 2457T	1076787
NP_836075.1	CDS	secF	NC_004741.1	358138	359109	D	forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF	358138..359109	Shigella flexneri 2a str. 2457T	1076788
NP_836076.1	CDS	yajD	NC_004741.1	359238	359585	D	residues 1 to 115 of 115 are 100.00 pct identical to residues 1 to 115 of 115 from Escherichia coli K-12 : B0410; hypothetical protein	359238..359585	Shigella flexneri 2a str. 2457T	1076789
NP_836077.1	CDS	tsx	NC_004741.1	359762	360646	R	residues 1 to 294 of 294 are 95.57 pct identical to residues 1 to 294 of 294 from Escherichia coli K-12 : B0411; receptor of phage t6 and colicin K; outer membrane protein Tsx	complement(359762..360646)	Shigella flexneri 2a str. 2457T	1076790
NP_836078.2	CDS	yajI	NC_004741.1	360944	361483	R	residues 1 to 199 of 199 are 93.96 pct identical to residues 1 to 199 of 199 from Escherichia coli K-12 : B0412; hypothetical protein	complement(360944..361483)	Shigella flexneri 2a str. 2457T	1076791
NP_836079.1	CDS	nrdR	NC_004741.1	361634	362083	D	residues 1 to 149 of 149 are 99.32 pct identical to residues 1 to 149 of 149 from Escherichia coli K-12 : B0413; transcriptional regulator NrdR	361634..362083	Shigella flexneri 2a str. 2457T	1076792
NP_836080.1	CDS	ribD	NC_004741.1	362087	363190	D	riboflavin biosynthesis protein which catalyzes the deamination and reduction steps in the riboflavin biosynthesis pathway; catalyzes the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 5-amino-6-(5-phosphoribitylamino)uracil; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase	362087..363190	Shigella flexneri 2a str. 2457T	1076793
NP_836081.1	CDS	ribH	NC_004741.1	363279	363749	D	RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase	363279..363749	Shigella flexneri 2a str. 2457T	1076794
NP_836082.1	CDS	nusB	NC_004741.1	363769	364188	D	Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB	363769..364188	Shigella flexneri 2a str. 2457T	1076795
NP_836083.1	CDS	thiL	NC_004741.1	364266	365243	D	catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP; thiamine monophosphate kinase	364266..365243	Shigella flexneri 2a str. 2457T	1076796
NP_836084.1	CDS	pgpA	NC_004741.1	365221	365739	D	hydrolyzes phosphatidylglycerophosphate to produce phosphatidylglycerol and phosphate; phosphatidylglycerophosphatase A	365221..365739	Shigella flexneri 2a str. 2457T	1080979
NP_836085.1	CDS	dxs	NC_004741.1	366822	368684	R	catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase	complement(366822..368684)	Shigella flexneri 2a str. 2457T	1080980
NP_836086.1	CDS	ispA	NC_004741.1	368709	369608	R	residues 1 to 299 of 299 are 95.98 pct identical to residues 1 to 299 of 299 from Escherichia coli K-12 : B0421; geranyltranstransferase	complement(368709..369608)	Shigella flexneri 2a str. 2457T	1076799
NP_836087.1	CDS	xseB	NC_004741.1	369608	369850	R	catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit	complement(369608..369850)	Shigella flexneri 2a str. 2457T	1076800
NP_836088.1	CDS	yajK	NC_004741.1	370056	371504	D	Required for the synthesis of the thiazole moiety; thiamine biosynthesis protein ThiI	370056..371504	Shigella flexneri 2a str. 2457T	1076801
NP_836089.1	CDS	thiJ	NC_004741.1	371558	372154	R	residues 1 to 198 of 198 are 97.97 pct identical to residues 1 to 198 of 198 from Escherichia coli K-12 : B0424; hypothetical protein	complement(371558..372154)	Shigella flexneri 2a str. 2457T	1076802
NP_836090.1	CDS	apbA	NC_004741.1	372111	373022	R	ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis; 2-dehydropantoate 2-reductase	complement(372111..373022)	Shigella flexneri 2a str. 2457T	1076803
NP_836091.1	CDS	yajQ	NC_004741.1	373190	373681	D	nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; nucleotide-binding protein	373190..373681	Shigella flexneri 2a str. 2457T	1076804
NP_836092.1	CDS	S4809	NC_004741.1	373741	375471	R	residues 1 to 575 of 576 are 48.69 pct identical to residues 1 to 575 of 576 from NRprotein_Feb03 : >ref|NP_460955.1|  periplasmic protein [Salmonella typhimurium LT2] gb|AAL20914.1|  periplasmic protein [Salmonella typhimurium LT2]; hypothetical protein	complement(373741..375471)	Shigella flexneri 2a str. 2457T	1076805
NP_836093.1	CDS	S4810	NC_004741.1	375524	377677	R	residues 1 to 713 of 717 are 51.59 pct identical to residues 1 to 717 of 720 from NRprotein_Feb03 : >ref|NP_405544.1|  exported protein [Yersinia pestis] ref|NP_669630.1| hypothetical [Yersinia pestis KIM] pir||AF0242 probable exported protein YPO1989 [imported] - Yersinia pestis (strain CO92) emb|CAC90802.1; hypothetical protein	complement(375524..377677)	Shigella flexneri 2a str. 2457T	1076806
NP_836094.1	CDS	S0372	NC_004741.1	377828	378103	D	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	377828..378103	Shigella flexneri 2a str. 2457T	1076807
NP_836095.1	CDS	S4811	NC_004741.1	378231	378524	D	residues 7 to 103 of 103 are 100.00 pct identical to residues 71 to 167 of 167 from NRprotein_Feb03 : >ref|NP_085209.1| IS1 transposase [Shigella flexneri] ref|NP_706317.1| IS1 transposase [Shigella flexneri 2a str. 301] ref|NP_707672.1| IS1 transposase [Shigella flexneri 2a str. 301] ref|NP_707862.1| IS1 transposase [Shigella flexneri 2a str. 301] ref|NP_708570.1| IS1 transposase [Shigella flexneri; IS1 orfB	378231..378524	Shigella flexneri 2a str. 2457T	1076808
NP_836096.1	CDS	S4812	NC_004741.1	378572	378811	R	residues 1 to 79 of 79 are 100.00 pct identical to residues 54 to 132 of 132 from NRprotein_Feb03 : >ref|NP_706318.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gb|AAN42025.1|AE015069_8 orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]; hypothetical protein	complement(378572..378811)	Shigella flexneri 2a str. 2457T	1076809
NP_836097.1	CDS	S0373	NC_004741.1	379105	379416	R	ORF2; residues 15 to 95 of 103 are 35.80 pct identical to residues 10 to 90 of 95 from GenPept : >dbj|BAA84915.1| (AB024946) orf80 [Escherichia coli]; hypothetical protein	complement(379105..379416)	Shigella flexneri 2a str. 2457T	1076810
NP_836098.1	CDS	cyoE	NC_004741.1	379600	380487	R	converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase	complement(379600..380487)	Shigella flexneri 2a str. 2457T	1076811
NP_836099.1	CDS	cyoD	NC_004741.1	380502	380831	R	residues 1 to 109 of 109 are 100.00 pct identical to residues 1 to 109 of 109 from Escherichia coli K-12 : B0429; cytochrome o ubiquinol oxidase subunit IV	complement(380502..380831)	Shigella flexneri 2a str. 2457T	1076812
NP_836100.1	CDS	cyoC	NC_004741.1	380831	381445	R	residues 25 to 204 of 204 are 100.00 pct identical to residues 25 to 204 of 204 from Escherichia coli K-12 : B0430; cytochrome o ubiquinol oxidase subunit III	complement(380831..381445)	Shigella flexneri 2a str. 2457T	1076815
NP_836101.1	CDS	S0379	NC_004741.1	383978	385027	R	residues 1 to 349 of 349 are 99.71 pct identical to residues 2 to 350 of 350 from GenPept : >gb|AAK18526.1|AF348706_215 (AF348706)  IS orf [Shigella flexneri]; ISSfl3 orfD	complement(383978..385027)	Shigella flexneri 2a str. 2457T	1076818
NP_836102.2	CDS	S0380	NC_004741.1	385243	385431	R	residues 1 to 59 of 62 are 88.13 pct identical to residues 273 to 331 of 533 from GenPept : >gb|AAL72376.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; partial; ISSfl3 orfC	complement(385243..385431)	Shigella flexneri 2a str. 2457T	1076819
NP_836103.1	CDS	S0381	NC_004741.1	385428	385562	R	residues 1 to 36 of 44 are 100.00 pct identical to residues 1 to 36 of 533 from GenPept : >gb|AAL72472.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; partial; ISSfl3 orfC	complement(385428..385562)	Shigella flexneri 2a str. 2457T	1076820
NP_836104.1	CDS	S0382	NC_004741.1	385582	385929	R	residues 1 to 115 of 115 are 100.00 pct identical to residues 1 to 115 of 115 from GenPept : >gb|AAL72465.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; ISSfl3 orfB	complement(385582..385929)	Shigella flexneri 2a str. 2457T	1076821
NP_836105.1	CDS	S0383	NC_004741.1	385926	386423	R	residues 1 to 165 of 165 are 98.78 pct identical to residues 60 to 224 of 224 from GenPept : >gb|AAL72464.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; ISSfl3 orfA	complement(385926..386423)	Shigella flexneri 2a str. 2457T	1076822
NP_836106.1	CDS	ampG	NC_004741.1	386970	388445	R	in Escherichia coli this protein is a permease involved in peptidoglycan recycling; member of major facilitator superfamily; MFS; inner membrane protein; muropeptide transporter	complement(386970..388445)	Shigella flexneri 2a str. 2457T	1076823
NP_836107.2	CDS	yajG	NC_004741.1	388489	389067	R	residues 1 to 226 of 226 are 93.80 pct identical to residues 1 to 226 of 226 from Escherichia coli K-12 : B0434; hypothetical protein	complement(388489..389067)	Shigella flexneri 2a str. 2457T	1076824
NP_836108.2	CDS	bolA	NC_004741.1	389372	389689	D	positive transcriptional regulator of morphogenetic pathway; controlling several genes involved in oxidative stress, acid stress, heat shock, osmotic shock, and carbon-starvation stress; transcriptional regulator BolA	389372..389689	Shigella flexneri 2a str. 2457T	1076825
NP_836109.1	CDS	tig	NC_004741.1	390033	391331	D	Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor	390033..391331	Shigella flexneri 2a str. 2457T	1076826
NP_836110.1	CDS	clpP	NC_004741.1	391578	392201	D	hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit	391578..392201	Shigella flexneri 2a str. 2457T	1076827
NP_836111.1	CDS	clpX	NC_004741.1	392327	393601	D	binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX	392327..393601	Shigella flexneri 2a str. 2457T	1076828
NP_836112.1	CDS	lon	NC_004741.1	393789	396143	D	residues 1 to 784 of 784 are 97.83 pct identical to residues 1 to 784 of 784 from Escherichia coli K-12 : B0439; DNA-binding ATP-dependent protease La	393789..396143	Shigella flexneri 2a str. 2457T	1076829
NP_836113.1	CDS	hupB	NC_004741.1	396352	396624	D	histone-like DNA-binding protein; transcriptional regulator HU subunit beta	396352..396624	Shigella flexneri 2a str. 2457T	1076830
NP_836114.1	CDS	ybaU	NC_004741.1	396816	398687	D	residues 1 to 623 of 623 are 96.95 pct identical to residues 1 to 623 of 623 from Escherichia coli K-12 : B0441; peptidyl-prolyl cis-trans isomerase (rotamase D)	396816..398687	Shigella flexneri 2a str. 2457T	1076831
NP_836115.1	CDS	ybaV	NC_004741.1	398838	399209	D	residues 1 to 123 of 123 are 85.36 pct identical to residues 1 to 123 of 123 from Escherichia coli K-12 : B0442; hypothetical protein	398838..399209	Shigella flexneri 2a str. 2457T	1076832
NP_836116.1	CDS	ybaW	NC_004741.1	399303	399701	D	residues 1 to 132 of 132 are 89.39 pct identical to residues 1 to 132 of 132 from Escherichia coli K-12 : B0443; hypothetical protein	399303..399701	Shigella flexneri 2a str. 2457T	1076833
NP_836117.1	CDS	ybaX	NC_004741.1	399753	400448	R	YbaX; catalyzes the transformation of GTP to 7-cyano-7-deazaguanine (preQ0), as one of the early reactions of quenosine biosynthesis; quenosine is a modified nucleoside that occurs at the wobble position of GUN anticodons in tRNAs for Asn, Asp, Tyr, and His; queuosine biosynthesis protein QueC	complement(399753..400448)	Shigella flexneri 2a str. 2457T	1076834
NP_836118.1	CDS	cof	NC_004741.1	402293	403123	D	residues 1 to 276 of 276 are 98.18 pct identical to residues 1 to 276 of 276 from Escherichia coli K-12 : B0446; hypothetical protein	402293..403123	Shigella flexneri 2a str. 2457T	1076837
NP_836119.1	CDS	ybaO	NC_004741.1	403190	403735	D	residues 1 to 181 of 181 are 98.34 pct identical to residues 1 to 181 of 181 from Escherichia coli K-12 : B0447; LRP-like transcriptional regulator	403190..403735	Shigella flexneri 2a str. 2457T	1076838
NP_836120.1	CDS	mdlA	NC_004741.1	403765	405537	D	residues 1 to 590 of 590 are 96.61 pct identical to residues 1 to 590 of 590 from Escherichia coli K-12 : B0448; multidrug transporter membrane\ATP-binding components	403765..405537	Shigella flexneri 2a str. 2457T	1076839
NP_836121.1	CDS	mdlB	NC_004741.1	405530	407311	D	residues 1 to 593 of 593 are 91.73 pct identical to residues 1 to 593 of 593 from Escherichia coli K-12 : B0449; multidrug transporter membrane\ATP-binding components	405530..407311	Shigella flexneri 2a str. 2457T	1076840
NP_836122.1	CDS	glnK	NC_004741.1	407492	407830	D	indirectly regulates nitrogen metabolism; at high nitrogen levels P-II 2 prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA); at low nitrogen levels P-II 2 is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA; functionally it is equivalent to protein P-II (GlnB), but itsexpression is driven by the presence of uridylyltransferase, nitrogen regulator I, and the absence of ammonia.; nitrogen regulatory protein P-II 2	407492..407830	Shigella flexneri 2a str. 2457T	1076841
NP_836123.1	CDS	amtB	NC_004741.1	407860	409146	D	residues 1 to 428 of 428 are 82.94 pct identical to residues 1 to 428 of 428 from Escherichia coli K-12 : B0451; ammonium transporter	407860..409146	Shigella flexneri 2a str. 2457T	1076842
NP_836124.1	CDS	tesB	NC_004741.1	409195	410055	R	residues 1 to 286 of 286 are 96.15 pct identical to residues 1 to 286 of 286 from Escherichia coli K-12 : B0452; acyl-CoA thioesterase II	complement(409195..410055)	Shigella flexneri 2a str. 2457T	1080558
NP_836125.1	CDS	ybaY	NC_004741.1	410273	410845	D	residues 1 to 190 of 190 are 75.26 pct identical to residues 1 to 190 of 190 from Escherichia coli K-12 : B0453; involved in glycoprotein/polysaccharide metabolism; hypothetical protein	410273..410845	Shigella flexneri 2a str. 2457T	1076843
NP_836126.1	CDS	S0405	NC_004741.1	410956	412284	D	residues 1 to 442 of 442 are 99.32 pct identical to residues 7 to 448 of 448 from GenPept : >gb|AAK18333.1|AF348706_22 (AF348706) IS4 orf [Shigella flexneri]; IS4 orf	410956..412284	Shigella flexneri 2a str. 2457T	1076844
NP_836127.1	CDS	ybaZ	NC_004741.1	412314	412625	R	residues 1 to 103 of 103 are 100.00 pct identical to residues 27 to 129 of 129 from Escherichia coli K-12 : B0454; hypothetical protein	complement(412314..412625)	Shigella flexneri 2a str. 2457T	1076845
NP_836128.1	CDS	ybaA	NC_004741.1	413004	413357	D	residues 1 to 117 of 117 are 100.00 pct identical to residues 1 to 117 of 117 from Escherichia coli K-12 : B0456; hypothetical protein	413004..413357	Shigella flexneri 2a str. 2457T	1076847
NP_836129.1	CDS	ylaB	NC_004741.1	413399	414949	R	residues 1 to 516 of 516 are 94.37 pct identical to residues 3 to 518 of 518 from Escherichia coli K-12 : B0457; hypothetical protein	complement(413399..414949)	Shigella flexneri 2a str. 2457T	1076848
NP_836130.1	CDS	ylaC	NC_004741.1	415113	415583	R	residues 1 to 156 of 156 are 100.00 pct identical to residues 14 to 169 of 169 from Escherichia coli K-12 : B0458; hypothetical protein	complement(415113..415583)	Shigella flexneri 2a str. 2457T	1076849
NP_836131.1	CDS	hha	NC_004741.1	416422	416640	R	with Hns involved in transcriptional regulation of hemolysin; non-specific DNA-binding protein which affects the production of multiple proteins; hemolysin expression-modulating protein	complement(416422..416640)	Shigella flexneri 2a str. 2457T	1076851
NP_836132.1	CDS	ybaJ	NC_004741.1	416666	417040	R	residues 1 to 124 of 124 are 99.19 pct identical to residues 1 to 124 of 124 from Escherichia coli K-12 : B0461; hypothetical protein	complement(416666..417040)	Shigella flexneri 2a str. 2457T	1076852
NP_836133.1	CDS	acrB	NC_004741.1	417586	420735	R	residues 1 to 1049 of 1049 are 94.47 pct identical to residues 1 to 1049 of 1049 from Escherichia coli K-12 : B0462; acriflavine resistance protein	complement(417586..420735)	Shigella flexneri 2a str. 2457T	1076853
NP_836134.1	CDS	acrA	NC_004741.1	420758	421951	R	residues 1 to 397 of 397 are 90.17 pct identical to residues 1 to 397 of 397 from Escherichia coli K-12 : B0463; acriflavin resistance protein AcrA precursor	complement(420758..421951)	Shigella flexneri 2a str. 2457T	1076854
NP_836135.1	CDS	acrR	NC_004741.1	422093	422740	D	regulates the acrAB operon which is involved in susceptibility to dephalothin and cephaloridine; DNA-binding transcriptional repressor AcrR	422093..422740	Shigella flexneri 2a str. 2457T	1076855
NP_836136.1	CDS	aefA	NC_004741.1	422868	426230	D	small mechanosensitive ion channel (MscS) that opens in response to stretch forces in the membrane lipid bilayer; maintains cell turgor through accumulation and release of potassium; large protein class of MscS; potassium efflux protein KefA	422868..426230	Shigella flexneri 2a str. 2457T	1076856
NP_836137.1	CDS	ybaM	NC_004741.1	426442	426603	R	residues 1 to 53 of 53 are 98.11 pct identical to residues 1 to 53 of 53 from Escherichia coli K-12 : B0466; hypothetical protein	complement(426442..426603)	Shigella flexneri 2a str. 2457T	1076857
NP_836138.1	CDS	priC	NC_004741.1	426617	427144	R	PriC; protein involved in DNA replication; part of the primosome, a protein complex required to restart stalled replication forks; binds the complex formed by PriA, PriB and DNA; PriC-dependent primosome requires a gap to restart DNA replication; stimulates Rep activity at stalled forks; primosomal replication protein N''	complement(426617..427144)	Shigella flexneri 2a str. 2457T	1076858
NP_836139.1	CDS	ybaN	NC_004741.1	427214	427591	D	residues 1 to 125 of 125 are 86.40 pct identical to residues 1 to 125 of 125 from Escherichia coli K-12 : B0468; hypothetical protein	427214..427591	Shigella flexneri 2a str. 2457T	1076859
NP_836140.1	CDS	apt	NC_004741.1	427744	428295	D	catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase	427744..428295	Shigella flexneri 2a str. 2457T	1076860
NP_836141.1	CDS	dnaX	NC_004741.1	428424	430349	D	catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau	428424..430349	Shigella flexneri 2a str. 2457T	1076861
NP_836142.1	CDS	ybaB	NC_004741.1	430402	430731	D	residues 1 to 109 of 109 are 70.64 pct identical to residues 1 to 109 of 109 from Escherichia coli K-12 : B0471; hypothetical protein	430402..430731	Shigella flexneri 2a str. 2457T	1076862
NP_836143.1	CDS	recR	NC_004741.1	430731	431336	D	involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR	430731..431336	Shigella flexneri 2a str. 2457T	1076863
NP_836144.1	CDS	htpG	NC_004741.1	431446	433320	D	molecular chaperone; heat shock protein 90	431446..433320	Shigella flexneri 2a str. 2457T	1076864
NP_836145.1	CDS	adk	NC_004741.1	433501	434145	D	essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase	433501..434145	Shigella flexneri 2a str. 2457T	1080956
NP_836146.1	CDS	hemH	NC_004741.1	434277	435239	D	protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase	434277..435239	Shigella flexneri 2a str. 2457T	1080922
NP_836147.1	CDS	ybaC	NC_004741.1	435377	436195	R	residues 1 to 272 of 272 are 92.64 pct identical to residues 1 to 272 of 319 from Escherichia coli K-12 : B0476; lipase	complement(435377..436195)	Shigella flexneri 2a str. 2457T	1076865
NP_836148.1	CDS	gsk	NC_004741.1	436347	437651	D	residues 1 to 434 of 434 are 96.77 pct identical to residues 1 to 434 of 434 from Escherichia coli K-12 : B0477; inosine-guanosine kinase	436347..437651	Shigella flexneri 2a str. 2457T	1076866
NP_836149.1	CDS	ybaL	NC_004741.1	437784	439460	R	YbaL; member of the CPA-2 family of antiporters; uncharacterized protein; cation:proton antiport protein	complement(437784..439460)	Shigella flexneri 2a str. 2457T	1076867
NP_836150.1	CDS	fsr	NC_004741.1	439698	440918	R	residues 1 to 406 of 406 are 77.83 pct identical to residues 1 to 406 of 406 from Escherichia coli K-12 : B0479; fosmidomycin resistance protein	complement(439698..440918)	Shigella flexneri 2a str. 2457T	1076868
NP_836151.1	CDS	ushA	NC_004741.1	441136	442788	D	catalyzes the degradation of periplasmic UDP-glucose to uridine, glucose-1-phosphate and inorganic phosphate; specific for uridine nucleotides; bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor	441136..442788	Shigella flexneri 2a str. 2457T	1076869
NP_836152.1	CDS	ybaK	NC_004741.1	442825	443304	R	residues 1 to 159 of 159 are 91.82 pct identical to residues 1 to 159 of 159 from Escherichia coli K-12 : B0481; hypothetical protein	complement(442825..443304)	Shigella flexneri 2a str. 2457T	1076870
NP_836153.1	CDS	ybaP	NC_004741.1	443508	444302	R	residues 1 to 264 of 264 are 100.00 pct identical to residues 1 to 264 of 264 from Escherichia coli K-12 : B0482; ligase	complement(443508..444302)	Shigella flexneri 2a str. 2457T	1076872
NP_836154.1	CDS	ybaQ	NC_004741.1	444386	444781	D	residues 1 to 131 of 131 are 97.70 pct identical to residues 1 to 131 of 131 from Escherichia coli K-12 : B0483; hypothetical protein	444386..444781	Shigella flexneri 2a str. 2457T	1076873
NP_836155.1	CDS	copA	NC_004741.1	444996	447500	R	residues 1 to 834 of 834 are 93.64 pct identical to residues 1 to 834 of 834 from Escherichia coli K-12 : B0484; copper exporting ATPase	complement(444996..447500)	Shigella flexneri 2a str. 2457T	1076874
NP_836156.1	CDS	ybaS	NC_004741.1	447762	448694	D	catalyzes the formation of glutamate from glutamine; glutaminase	447762..448694	Shigella flexneri 2a str. 2457T	1076875
NP_836157.1	CDS	ybaT	NC_004741.1	448697	449989	D	residues 1 to 430 of 430 are 86.51 pct identical to residues 1 to 430 of 430 from Escherichia coli K-12 : B0486; amino acid/amine transport protein	448697..449989	Shigella flexneri 2a str. 2457T	1076876
NP_836158.1	CDS	ybbI	NC_004741.1	450114	450521	D	activator of copper-responsive regulon genes; DNA-binding transcriptional regulator CueR	450114..450521	Shigella flexneri 2a str. 2457T	1076877
NP_836159.1	CDS	ybbJ	NC_004741.1	450522	450977	R	residues 1 to 151 of 151 are 81.45 pct identical to residues 1 to 151 of 151 from Escherichia coli K-12 : B0488; hypothetical protein	complement(450522..450977)	Shigella flexneri 2a str. 2457T	1076878
NP_836160.1	CDS	ybbK	NC_004741.1	450977	451894	R	residues 1 to 305 of 305 are 95.40 pct identical to residues 1 to 305 of 305 from Escherichia coli K-12 : B0489; protease	complement(450977..451894)	Shigella flexneri 2a str. 2457T	1076879
NP_836161.1	CDS	ybbL	NC_004741.1	452040	452717	D	residues 1 to 225 of 225 are 98.66 pct identical to residues 1 to 225 of 225 from Escherichia coli K-12 : B0490; ABC transporter ATP-binding protein	452040..452717	Shigella flexneri 2a str. 2457T	1076880
NP_836162.1	CDS	ybbM	NC_004741.1	452677	453483	D	residues 1 to 268 of 268 are 89.55 pct identical to residues 1 to 268 of 268 from Escherichia coli K-12 : B0491; metal resistance protein	452677..453483	Shigella flexneri 2a str. 2457T	1076881
NP_836163.1	CDS	ybbN	NC_004741.1	453546	454436	R	residues 1 to 296 of 296 are 95.60 pct identical to residues 1 to 296 of 296 from Escherichia coli K-12 : B0492; thioredoxin-like protein	complement(453546..454436)	Shigella flexneri 2a str. 2457T	1076882
NP_836164.1	CDS	ybbO	NC_004741.1	454461	455270	R	residues 1 to 269 of 269 are 98.51 pct identical to residues 1 to 269 of 269 from Escherichia coli K-12 : B0493; short chain dehydrogenase	complement(454461..455270)	Shigella flexneri 2a str. 2457T	1076883
NP_836165.1	CDS	ybbA	NC_004741.1	455853	456539	D	residues 1 to 228 of 228 are 100.00 pct identical to residues 1 to 228 of 228 from Escherichia coli K-12 : B0495; ABC transporter ATP-binding protein	455853..456539	Shigella flexneri 2a str. 2457T	1076886
NP_836166.1	CDS	ybbB	NC_004741.1	459664	460758	R	catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA; tRNA 2-selenouridine synthase	complement(459664..460758)	Shigella flexneri 2a str. 2457T	1076888
NP_836167.1	CDS	ybbS	NC_004741.1	460827	461753	R	activator of the allDC-ylbA operon involved in allantoin utilization; DNA-binding transcriptional activator AllS	complement(460827..461753)	Shigella flexneri 2a str. 2457T	1076889
NP_836168.1	CDS	ybbT	NC_004741.1	461983	462465	D	catalyzes the formation of glyoxylate from (S)-ureidoglycolate; ureidoglycolate hydrolase	461983..462465	Shigella flexneri 2a str. 2457T	1076890
NP_836169.1	CDS	ybbU	NC_004741.1	462543	463358	D	regulates operons involved in the utilization of allantoin; DNA-binding transcriptional repressor AllR	462543..463358	Shigella flexneri 2a str. 2457T	1076891
NP_836170.1	CDS	gcl	NC_004741.1	463448	465229	D	catalyzes the formation of 2-hydroxy-3-oxopropanoate (tartronate semialdehyde) from two molecules of glyoxylate; glyoxylate carboligase	463448..465229	Shigella flexneri 2a str. 2457T	1076892
NP_836171.1	CDS	gip	NC_004741.1	465242	465523	D	residues 1 to 93 of 93 are 97.84 pct identical to residues 1 to 93 of 258 from Escherichia coli K-12 : B0508; glyoxylate-induced protein	465242..465523	Shigella flexneri 2a str. 2457T	1076893
NP_836172.1	CDS	S0455	NC_004741.1	465534	466037	R	residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri]; IS1 orfB	complement(465534..466037)	Shigella flexneri 2a str. 2457T	1076894
NP_836173.1	CDS	S0456	NC_004741.1	465956	466231	R	residues 1 to 91 of 91 are 97.80 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(465956..466231)	Shigella flexneri 2a str. 2457T	1076895
NP_836174.1	CDS	ylbA	NC_004741.1	466260	466931	R	residues 1 to 217 of 223 are 91.70 pct identical to residues 1 to 217 of 261 from Escherichia coli K-12 : B0515; hypothetical protein	complement(466260..466931)	Shigella flexneri 2a str. 2457T	1076896
NP_836175.2	CDS	ylbB	NC_004741.1	466942	468231	R	allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase	complement(466942..468231)	Shigella flexneri 2a str. 2457T	1076897
NP_836176.1	CDS	arcC	NC_004741.1	468821	469714	D	forms a homodimer; may be used to synthesize carbomyl phosphate from ATP and carbamate; carbamate kinase	468821..469714	Shigella flexneri 2a str. 2457T	1076899
NP_836177.1	CDS	purK	NC_004741.1	469852	470919	R	With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit	complement(469852..470919)	Shigella flexneri 2a str. 2457T	1076900
NP_836178.1	CDS	purE	NC_004741.1	470916	471425	R	Catalyzes a step in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase catalytic subunit	complement(470916..471425)	Shigella flexneri 2a str. 2457T	1076901
NP_836179.1	CDS	ybbF	NC_004741.1	471543	472265	R	catalyzes the formation of 2,3=diacylglucosamine 1-phosphate from UDP-2,3=diacylglucosamine; UDP-2,3-diacylglucosamine hydrolase	complement(471543..472265)	Shigella flexneri 2a str. 2457T	1076902
NP_836180.1	CDS	ppiB	NC_004741.1	472268	472762	R	residues 1 to 164 of 164 are 99.39 pct identical to residues 1 to 164 of 164 from Escherichia coli K-12 : B0525; peptidyl-prolyl cis-trans isomerase B (rotamase B)	complement(472268..472762)	Shigella flexneri 2a str. 2457T	1076903
NP_836181.1	CDS	cysS	NC_004741.1	472936	474321	D	catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase	472936..474321	Shigella flexneri 2a str. 2457T	1076904
NP_836182.1	CDS	ybcI	NC_004741.1	474357	474866	R	residues 1 to 149 of 169 are 85.62 pct identical to residues 1 to 153 of 173 from Escherichia coli K-12 : B0527; hypothetical protein	complement(474357..474866)	Shigella flexneri 2a str. 2457T	1076905
NP_836183.2	CDS	ybcJ	NC_004741.1	474974	475186	R	residues 1 to 77 of 77 are 98.70 pct identical to residues 1 to 77 of 77 from Escherichia coli K-12 : B0528; hypothetical protein	complement(474974..475186)	Shigella flexneri 2a str. 2457T	1076906
NP_836184.1	CDS	folD	NC_004741.1	475188	476054	R	residues 1 to 288 of 288 are 99.30 pct identical to residues 1 to 288 of 288 from Escherichia coli K-12 : B0529; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase	complement(475188..476054)	Shigella flexneri 2a str. 2457T	1076907
NP_836185.1	CDS	sfmA	NC_004741.1	476502	477077	D	residues 1 to 191 of 191 are 90.57 pct identical to residues 1 to 191 of 191 from Escherichia coli K-12 : B0530; fimbrial-like protein	476502..477077	Shigella flexneri 2a str. 2457T	1076908
NP_836186.1	CDS	sfmC	NC_004741.1	477297	477989	D	residues 13 to 230 of 230 are 90.82 pct identical to residues 13 to 230 of 230 from Escherichia coli K-12 : B0531; chaperone	477297..477989	Shigella flexneri 2a str. 2457T	1076909
NP_836187.1	CDS	S0471	NC_004741.1	478532	479035	R	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri]; IS1 orfB	complement(478532..479035)	Shigella flexneri 2a str. 2457T	1076910
NP_836188.1	CDS	S0472	NC_004741.1	478954	479229	R	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(478954..479229)	Shigella flexneri 2a str. 2457T	1076911
NP_836189.1	CDS	envY	NC_004741.1	479858	480619	R	residues 1 to 253 of 253 are 92.09 pct identical to residues 1 to 253 of 253 from Escherichia coli K-12 : B0566; involved in thermoregulation of porin biosynthesis; envelope protein	complement(479858..480619)	Shigella flexneri 2a str. 2457T	1076915
NP_836190.1	CDS	ybcH	NC_004741.1	480802	481692	R	residues 1 to 296 of 296 are 93.24 pct identical to residues 1 to 296 of 296 from Escherichia coli K-12 : B0567; hypothetical protein	complement(480802..481692)	Shigella flexneri 2a str. 2457T	1076916
NP_836191.1	CDS	ybcZ	NC_004741.1	487035	488477	R	residues 1 to 480 of 480 are 88.95 pct identical to residues 1 to 480 of 480 from Escherichia coli K-12 : B0570; sensor kinase CusS	complement(487035..488477)	Shigella flexneri 2a str. 2457T	1076919
NP_836192.1	CDS	ylcA	NC_004741.1	488467	489150	R	response regulator in two-component regulatory system with CusS; regulates the copper efflux system; DNA-binding transcriptional activator CusR	complement(488467..489150)	Shigella flexneri 2a str. 2457T	1076921
NP_836193.1	CDS	ylcB	NC_004741.1	489307	490689	D	with CusA, CusB and CusF is part of a cation efflux system that mediates resistance to copper and silver; copper/silver efflux system outer membrane protein CusC	489307..490689	Shigella flexneri 2a str. 2457T	1076922
NP_836194.1	CDS	ylcC	NC_004741.1	490713	491045	D	residues 1 to 110 of 110 are 99.09 pct identical to residues 1 to 110 of 110 from Escherichia coli K-12 : B0573; periplasmic copper-binding protein	490713..491045	Shigella flexneri 2a str. 2457T	1076923
NP_836195.1	CDS	S0484	NC_004741.1	491986	492309	D	residues 3 to 104 of 107 are 42.85 pct identical to residues 16 to 120 of 409 from GenPept : >gb|AAF28112.1|AF153317_4 (AF153317) integrase [Shigella dysenteriae]; IntA	491986..492309	Shigella flexneri 2a str. 2457T	1076925
NP_836196.1	CDS	S0485	NC_004741.1	492349	492969	R	residues 1 to 206 of 206 are 100.00 pct identical to residues 1 to 206 of 206 from GenPept : >gb|AAD44736.1|AF141323_7 (AF141323) TnpC [Shigella flexneri]; partial; IS629 orfB	complement(492349..492969)	Shigella flexneri 2a str. 2457T	1078534
NP_836197.1	CDS	S0486	NC_004741.1	493232	493558	R	residues 1 to 108 of 108 are 89.81 pct identical to residues 1 to 108 of 108 from GenPept : >gb|AAL72456.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS629 orfA	complement(493232..493558)	Shigella flexneri 2a str. 2457T	1076926
NP_836198.1	CDS	S0487	NC_004741.1	494699	495490	R	IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats; insertion sequence 2 OrfB protein	complement(494699..495490)	Shigella flexneri 2a str. 2457T	1076927
NP_836199.1	CDS	S0488	NC_004741.1	495562	495972	R	IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats; insertion sequence 2 OrfA protein	complement(495562..495972)	Shigella flexneri 2a str. 2457T	1076928
NP_836200.1	CDS	ybdE	NC_004741.1	496745	499888	D	residues 1 to 1046 of 1047 are 96.36 pct identical to residues 1 to 1046 of 1047 from Escherichia coli K-12 : B0575; inner membrane component for iron transport	496745..499888	Shigella flexneri 2a str. 2457T	1076929
NP_836201.1	CDS	pheP	NC_004741.1	499989	501365	D	residues 1 to 458 of 458 are 89.95 pct identical to residues 1 to 458 of 458 from Escherichia coli K-12 : B0576; phenylalanine transporter	499989..501365	Shigella flexneri 2a str. 2457T	1076930
NP_836202.1	CDS	ybdG	NC_004741.1	501433	502680	R	residues 1 to 415 of 415 are 97.10 pct identical to residues 1 to 415 of 415 from Escherichia coli K-12 : B0577; transporter	complement(501433..502680)	Shigella flexneri 2a str. 2457T	1076931
NP_836203.1	CDS	nfnB	NC_004741.1	502788	503441	R	catalyzes the reduction of nitroaromatic compounds such as nitrofurazone, quinones and the anti-tumor agent CB1954; NAD(P)H-dependent; oxygen insensitive; dihydropteridine reductase	complement(502788..503441)	Shigella flexneri 2a str. 2457T	1077000
NP_836204.1	CDS	ybdF	NC_004741.1	503535	503903	R	residues 1 to 122 of 122 are 99.18 pct identical to residues 1 to 122 of 122 from Escherichia coli K-12 : B0579; hypothetical protein	complement(503535..503903)	Shigella flexneri 2a str. 2457T	1076932
NP_836205.1	CDS	ybdJ	NC_004741.1	503968	504216	R	residues 1 to 82 of 82 are 78.04 pct identical to residues 1 to 82 of 82 from Escherichia coli K-12 : B0580; hypothetical protein	complement(503968..504216)	Shigella flexneri 2a str. 2457T	1076933
NP_836206.1	CDS	ybdK	NC_004741.1	504282	505400	R	ATP-dependent; carboxylate-amine ligase with weak glutamate--cysteine ligase activity; carboxylate-amine ligase	complement(504282..505400)	Shigella flexneri 2a str. 2457T	1076934
NP_836207.1	CDS	IS103	NC_004741.1	505832	506353	D	residues 1 to 173 of 173 are 100.00 pct identical to residues 1 to 173 of 173 from GenPept : >gb|AAB18534.1| (U00039) orfA in IS150 [Escherichia coli]; IS103 orf	505832..506353	Shigella flexneri 2a str. 2457T	1077940
NP_836208.1	CDS	S0498	NC_004741.1	506350	506781	D	residues 1 to 117 of 143 are 99.14 pct identical to residues 1 to 117 of 283 from GenPept : >gb|AAB18535.2| (U00039) orfB in IS150 [Escherichia coli]; IS150 orfB	506350..506781	Shigella flexneri 2a str. 2457T	1076935
NP_836209.1	CDS	S0499	NC_004741.1	507298	507450	D	residues 1 to 50 of 50 are 95.99 pct identical to residues 34 to 83 of 83 from GenPept : >gb|AAG54916.1|AE005238_2 (AE005238) Z0722 gene product [Escherichia coli O157:H7 EDL933]; hypothetical protein	507298..507450	Shigella flexneri 2a str. 2457T	1076797
NP_836210.1	CDS	S0500	NC_004741.1	507702	507953	D	residues 1 to 83 of 83 are 97.59 pct identical to residues 1 to 83 of 83 from GenPept : >gb|AAG54916.1|AE005238_2 (AE005238) Z0722 gene product [Escherichia coli O157:H7 EDL933]; hypothetical protein	507702..507953	Shigella flexneri 2a str. 2457T	1080978
NP_836211.1	CDS	entD	NC_004741.1	508075	508704	R	residues 1 to 209 of 209 are 87.55 pct identical to residues 1 to 209 of 209 from Escherichia coli K-12 : B0583; phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex	complement(508075..508704)	Shigella flexneri 2a str. 2457T	1076936
NP_836212.1	CDS	fepA	NC_004741.1	508870	511110	R	Fep; Cbt; Cbr; FeuB; FepA; PfeA; IroN; BfeA; outer membrane receptor of ferric enterobactin and colicins B and D; interacts with the TonB-ExbBD complex which catalyzes the translocation of the siderophore to the periplasmic space; outer membrane receptor FepA	complement(508870..511110)	Shigella flexneri 2a str. 2457T	1076938
NP_836213.1	CDS	fes	NC_004741.1	511353	512555	D	residues 27 to 400 of 400 are 98.12 pct identical to residues 1 to 374 of 374 from Escherichia coli K-12 : B0585; enterobactin/ferric enterobactin esterase	511353..512555	Shigella flexneri 2a str. 2457T	1076939
NP_836214.1	CDS	entF	NC_004741.1	512773	516618	D	with EntB, EntD, and EntE forms the multienzyme complex enterobactin synthase; EntF is the serine activating enzyme which catalyzes the formation of the amide and ester bonds of the cyclic enterobactin; enterobactin synthase subunit F	512773..516618	Shigella flexneri 2a str. 2457T	1076940
NP_836215.1	CDS	S0505	NC_004741.1	516702	516977	D	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	516702..516977	Shigella flexneri 2a str. 2457T	1080988
NP_836216.1	CDS	S0506	NC_004741.1	516896	517399	D	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri]; IS1 orfB	516896..517399	Shigella flexneri 2a str. 2457T	1076572
NP_836217.1	CDS	fepC	NC_004741.1	518740	519555	R	with FepBDE is involved in the transport of ferric enterobactin; iron-enterobactin transporter ATP-binding protein	complement(518740..519555)	Shigella flexneri 2a str. 2457T	1076943
NP_836218.1	CDS	fepG	NC_004741.1	519552	520544	R	with FepBCD is involved in the transport of ferric enterobactin; iron-enterobactin transporter permease	complement(519552..520544)	Shigella flexneri 2a str. 2457T	1076944
NP_836219.1	CDS	fepD	NC_004741.1	520541	521557	R	with FepBCG is involved in the transport of ferric enterobactin; iron-enterobactin transporter membrane protein	complement(520541..521557)	Shigella flexneri 2a str. 2457T	1076945
NP_836220.1	CDS	ybdA	NC_004741.1	521656	522888	D	protein p43; inner membrane protein that exports enterobactin to the periplasmic space; member of the major facilitator superfamily (MFS) of transporters; enterobactin exporter EntS	521656..522888	Shigella flexneri 2a str. 2457T	1076946
NP_836221.1	CDS	fepB	NC_004741.1	522892	523848	R	with FepCDG is involved in the transport of ferric enterobactin; iron-enterobactin transporter periplasmic binding protein	complement(522892..523848)	Shigella flexneri 2a str. 2457T	1076947
NP_836222.1	CDS	entE	NC_004741.1	525325	526935	D	bifunctional 2,3-dihydroxybenzoate-AMP ligase/S-dihydroxybenzoyltransferase; activates the carboxylate group of 2,3-dihydroxy-benzoate forming (2,3-dihydroxybenzoyl)adenylate then catalyzes the acylation of holo-entB with 2,3-dihydroxy-benzoate adenylate; enterobactin synthase subunit E	525325..526935	Shigella flexneri 2a str. 2457T	1076948
NP_836223.1	CDS	entB	NC_004741.1	526949	527806	D	residues 1 to 285 of 285 are 99.64 pct identical to residues 1 to 285 of 285 from Escherichia coli K-12 : B0595; 2,3-dihydro-2,3-dihydroxybenzoate synthetase	526949..527806	Shigella flexneri 2a str. 2457T	1076949
NP_836224.1	CDS	entA	NC_004741.1	527806	528552	D	catalyzes the formation of 2,3-dihydroxybenzoate from 2,3-dihydro-2,3-dihydroxybenzoate; involved in the biosynthesis of siderophores, enterobactin, bacillibactin or vibriobactin; 2,3-dihydroxybenzoate-2,3-dehydrogenase	527806..528552	Shigella flexneri 2a str. 2457T	1076950
NP_836225.1	CDS	ybdB	NC_004741.1	528555	528968	D	residues 1 to 137 of 137 are 90.51 pct identical to residues 1 to 137 of 137 from Escherichia coli K-12 : B0597; hypothetical protein	528555..528968	Shigella flexneri 2a str. 2457T	1076951
NP_836226.1	CDS	cstA	NC_004741.1	529149	531254	D	residues 1 to 701 of 701 are 90.58 pct identical to residues 1 to 701 of 701 from Escherichia coli K-12 : B0598; carbon starvation protein	529149..531254	Shigella flexneri 2a str. 2457T	1076952
NP_836227.1	CDS	ybdH	NC_004741.1	531643	532731	R	member of the iron-containing alcohol dehydrogenase family; unknown function; hypothetical protein	complement(531643..532731)	Shigella flexneri 2a str. 2457T	1076953
NP_836228.1	CDS	ybdL	NC_004741.1	532840	534000	D	catalyzes the transfer of an amino moiety; aminotransferase	532840..534000	Shigella flexneri 2a str. 2457T	1076954
NP_836229.1	CDS	S0522	NC_004741.1	534520	535146	R	residues 1 to 208 of 208 are 100.00 pct identical to residues 72 to 279 of 279 from GenPept : >gb|AAL72449.1| (AF386526) InsB [Shigella flexneri 2a]; partial; IS911 orfB	complement(534520..535146)	Shigella flexneri 2a str. 2457T	1076956
NP_836230.1	CDS	S0523	NC_004741.1	535386	535688	R	residues 1 to 100 of 100 are 100.00 pct identical to residues 13 to 112 of 112 from GenPept : >gb|AAL72382.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS911 orfA	complement(535386..535688)	Shigella flexneri 2a str. 2457T	1076958
NP_836231.1	CDS	S0526	NC_004741.1	536938	537216	D	residues 1 to 92 of 92 are 92.39 pct identical to residues 3 to 94 of 94 from GenPept : >gb|AAG53987.1|AF327445_1 (AF327445)  transposase A [Pantoea agglomerans]; ISEhe3 orfA	536938..537216	Shigella flexneri 2a str. 2457T	1076960
NP_836232.1	CDS	S0527	NC_004741.1	537273	538085	D	residues 1 to 270 of 270 are 95.92 pct identical to residues 10 to 279 of 279 from GenPept : >gb|AAG53988.1|AF327445_2 (AF327445)  transposase B [Pantoea agglomerans]; ISEhe3 orfB	537273..538085	Shigella flexneri 2a str. 2457T	1076961
NP_836233.2	CDS	dsbG	NC_004741.1	539566	540312	R	Involved in disulfide bond formation; disulfide isomerase/thiol-disulfide oxidase	complement(539566..540312)	Shigella flexneri 2a str. 2457T	1076962
NP_836234.1	CDS	ahpC	NC_004741.1	540684	541247	D	with AhpF catalyzes the conversion of alkyl hydroperoxides to their corresponding alcohols; AhpC reduced the hydroperoxide substrate; alkyl hydroperoxide reductase subunit C	540684..541247	Shigella flexneri 2a str. 2457T	1076966
NP_836235.1	CDS	ahpF	NC_004741.1	541462	543057	D	residues 1 to 531 of 531 are 95.29 pct identical to residues 1 to 531 of 531 from Escherichia coli K-12 : B0606; involved in detoxification of hydroperoxides; alkyl hydroperoxide reductase, F52a subunit	541462..543057	Shigella flexneri 2a str. 2457T	1078851
NP_836236.1	CDS	ybdQ	NC_004741.1	543178	543606	R	residues 1 to 142 of 142 are 98.59 pct identical to residues 1 to 142 of 142 from Escherichia coli K-12 : B0607; hypothetical protein	complement(543178..543606)	Shigella flexneri 2a str. 2457T	1076967
NP_836237.1	CDS	ybdR	NC_004741.1	543827	545065	D	residues 1 to 412 of 412 are 98.78 pct identical to residues 1 to 412 of 412 from Escherichia coli K-12 : B0608; oxidoreductase	543827..545065	Shigella flexneri 2a str. 2457T	1076968
NP_836238.1	CDS	S0533	NC_004741.1	545146	545607	D	residues 1 to 147 of 147 are 100.00 pct identical to residues 7 to 153 of 153 from Escherichia coli K-12 : B0609; hypothetical protein	545146..545607	Shigella flexneri 2a str. 2457T	1076969
NP_836239.1	CDS	rnk	NC_004741.1	545296	545706	R	Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis, CTP for lipid synthesis, and GTP for protein elongation; nucleoside diphosphate kinase regulator	complement(545296..545706)	Shigella flexneri 2a str. 2457T	1076970
NP_836240.1	CDS	rna	NC_004741.1	545935	546759	R	residues 7 to 274 of 274 are 91.79 pct identical to residues 1 to 268 of 268 from Escherichia coli K-12 : B0611; cleaves phosphodiester bond between any two nucleotides; ribonuclease I	complement(545935..546759)	Shigella flexneri 2a str. 2457T	1076971
NP_836241.1	CDS	citG	NC_004741.1	548368	549246	R	catalyzes the formation of 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA from ATP and 3-dephospho-CoA; triphosphoribosyl-dephospho-CoA synthase	complement(548368..549246)	Shigella flexneri 2a str. 2457T	1076973
NP_836242.1	CDS	citX	NC_004741.1	549283	549771	R	2'-(5''-phosphoribosyl)-3'-dephospho-CoA transferase; holo-citrate lyase synthase; CitG forms the prosthetic group precursor 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA which is then transferred to apo-ACP by CitX to produce holo-ACP and pyrophosphate; 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase	complement(549283..549771)	Shigella flexneri 2a str. 2457T	1076974
NP_836243.1	CDS	citF	NC_004741.1	549775	551307	R	residues 1 to 510 of 510 are 99.01 pct identical to residues 1 to 510 of 510 from Escherichia coli K-12 : B0615; citrate lyase subunit alpha	complement(549775..551307)	Shigella flexneri 2a str. 2457T	1078027
NP_836244.1	CDS	citE	NC_004741.1	551318	552226	R	residues 1 to 302 of 302 are 95.36 pct identical to residues 6 to 307 of 307 from Escherichia coli K-12 : B0616; citrate lyase beta chain (acyl lyase subunit)	complement(551318..552226)	Shigella flexneri 2a str. 2457T	1076975
NP_836245.1	CDS	citD	NC_004741.1	552223	552519	R	acyl carrier protein; with CitE and CitF catalyzes the formation of oxaloacetate from citrate; citrate lyase subunit gamma	complement(552223..552519)	Shigella flexneri 2a str. 2457T	1076976
NP_836246.1	CDS	citC	NC_004741.1	552534	553679	R	residues 1 to 381 of 381 are 99.47 pct identical to residues 1 to 381 of 381 from Escherichia coli K-12 : B0618; citrate lyase synthetase (citrate (pro-3S)-lyase ligase	complement(552534..553679)	Shigella flexneri 2a str. 2457T	1076978
NP_836247.1	CDS	S0543	NC_004741.1	554059	554562	R	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri]; IS1 orfB	complement(554059..554562)	Shigella flexneri 2a str. 2457T	1076979
NP_836248.1	CDS	S0545	NC_004741.1	554481	554756	R	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(554481..554756)	Shigella flexneri 2a str. 2457T	1076980
NP_836249.1	CDS	ybhA	NC_004741.1	555625	556443	D	YbhA; catalyzes the dephosphorylation of pyridoxal phosphate, fructose 1,6-bisphosphate, erythrose 4-phosphate and p-nitrophenyl phosphate; purine and pyrimidine nucleotides are secondary substrates; phosphotransferase activity observed when using monophosphates as phosphate donor; member of the haloacid dehalogenase-like hydrolases superfamily; phosphotransferase	555625..556443	Shigella flexneri 2a str. 2457T	1078907
NP_836250.1	CDS	modC	NC_004741.1	556444	557502	R	Part of the ABC transporter complex modABC involved in molybdenum import; molybdate transporter ATP-binding protein	complement(556444..557502)	Shigella flexneri 2a str. 2457T	1076981
NP_836251.1	CDS	modB	NC_004741.1	557505	558194	R	part of ModCBA molybdate transporter; member of ABC superfamily; inner membrane component; regulated by repressor protein ModE; molybdate ABC transporter permease	complement(557505..558194)	Shigella flexneri 2a str. 2457T	1076982
NP_836252.1	CDS	modA	NC_004741.1	558194	558967	R	with ModCB is involved in the high-affinity transport of molybdate; molybdate transporter periplasmic protein	complement(558194..558967)	Shigella flexneri 2a str. 2457T	1076983
NP_836253.1	CDS	S0550	NC_004741.1	559134	559283	R	residues 1 to 49 of 49 are 71.42 pct identical to residues 1 to 49 of 49 from Escherichia coli K-12 : B0762; hypothetical protein	complement(559134..559283)	Shigella flexneri 2a str. 2457T	1076984
NP_836254.1	CDS	modE	NC_004741.1	559412	560200	D	represses the modABCD operon and activates the moaABCD and napFDAGHBC operons; DNA-binding transcriptional regulator ModE	559412..560200	Shigella flexneri 2a str. 2457T	1076985
NP_836255.1	CDS	modF	NC_004741.1	560268	561740	D	contains 2 ATP-binding cassettes; involved in the transport of molybdenum; molybdenum transport ATP-binding protein ModF	560268..561740	Shigella flexneri 2a str. 2457T	1076986
NP_836256.1	CDS	galE	NC_004741.1	562001	563017	D	residues 1 to 338 of 338 are 99.11 pct identical to residues 1 to 338 of 338 from Escherichia coli K-12 : B0759; UDP-galactose-4-epimerase	562001..563017	Shigella flexneri 2a str. 2457T	1076987
NP_836257.1	CDS	galT	NC_004741.1	563027	564073	D	catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P; galactose-1-phosphate uridylyltransferase	563027..564073	Shigella flexneri 2a str. 2457T	1076988
NP_836258.1	CDS	galK	NC_004741.1	564077	565225	D	catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism; galactokinase	564077..565225	Shigella flexneri 2a str. 2457T	1076989
NP_836259.1	CDS	galM	NC_004741.1	565219	566259	D	catalyzes the conversion of alpha-aldose to the beta-anomer; active on D-glucose, L-arabinose, D-xylose, D-galactose, maltose and lactose; links the metabolism of lactose and galactose; aldose 1-epimerase	565219..566259	Shigella flexneri 2a str. 2457T	1076990
NP_836260.1	CDS	gpmA	NC_004741.1	566462	567214	D	catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase	566462..567214	Shigella flexneri 2a str. 2457T	1076992
NP_836261.1	CDS	aroG	NC_004741.1	567381	568433	R	catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase	complement(567381..568433)	Shigella flexneri 2a str. 2457T	1076993
NP_836262.1	CDS	S0559	NC_004741.1	568749	569129	D	residues 1 to 126 of 126 are 65.07 pct identical to residues 1 to 126 of 126 from Escherichia coli K-12 : B0753; homeobox protein	568749..569129	Shigella flexneri 2a str. 2457T	1076994
NP_836263.1	CDS	ybgR	NC_004741.1	569243	570184	D	involved in zinc efflux across the cytoplasmic membrane; zinc transporter ZitB	569243..570184	Shigella flexneri 2a str. 2457T	1079579
NP_836264.1	CDS	pnuC	NC_004741.1	570181	570900	R	residues 1 to 239 of 239 are 100.00 pct identical to residues 1 to 239 of 239 from Escherichia coli K-12 : B0751; required for NMN transport; PnuC protein	complement(570181..570900)	Shigella flexneri 2a str. 2457T	1076995
NP_836265.1	CDS	nadA	NC_004741.1	570938	571981	R	3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase	complement(570938..571981)	Shigella flexneri 2a str. 2457T	1076997
NP_836266.1	CDS	ybgF	NC_004741.1	572965	573756	R	periplasmic protein that interacts with TolA; the tol-pal system is probably involved in maintaining cell envelope integrity; tol-pal system protein YbgF	complement(572965..573756)	Shigella flexneri 2a str. 2457T	1077006
NP_836267.1	CDS	pal	NC_004741.1	573766	574287	R	residues 1 to 173 of 173 are 93.64 pct identical to residues 1 to 173 of 173 from Escherichia coli K-12 : B0741; peptidoglycan-associated outer membrane lipoprotein	complement(573766..574287)	Shigella flexneri 2a str. 2457T	1077007
NP_836268.1	CDS	tolB	NC_004741.1	574322	575614	R	forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB	complement(574322..575614)	Shigella flexneri 2a str. 2457T	1076964
NP_836269.1	CDS	tolA	NC_004741.1	575747	576988	R	inner membrane component of 7 member Tol-Pal envelope-spanning complex; involved in maintaining cell envelope integrity; utilized by colicins and filamentous phages for import; interacts with TolB, Pal, and through TolB to various outer membrane porins; cell envelope integrity inner membrane protein TolA	complement(575747..576988)	Shigella flexneri 2a str. 2457T	1077008
NP_836270.1	CDS	tolR	NC_004741.1	577053	577481	R	membrane spanning protein in TolA-TolQ-TolR complex; involved in the tonB-independent uptake of group A colicins; colicin uptake protein TolR	complement(577053..577481)	Shigella flexneri 2a str. 2457T	1077009
NP_836271.1	CDS	tolQ	NC_004741.1	577485	578177	R	membrane spanning protein in TolA-TolQ-TolR complex; involved in the tonB-independent uptake of group A colicins; colicin uptake protein TolQ	complement(577485..578177)	Shigella flexneri 2a str. 2457T	1077010
NP_836272.1	CDS	ybgC	NC_004741.1	578174	578578	R	catalyzes the hydrolysis of short chain aliphatic acyl-CoA thioesters; physiological role remains unknown; involved in phospholipid metabolism; part of the Tol/Pal system of proteins that are critical for maintaining the integrity of the cell envelope components; acyl-CoA thioester hydrolase YbgC	complement(578174..578578)	Shigella flexneri 2a str. 2457T	1077011
NP_836273.1	CDS	ybgE	NC_004741.1	578728	579021	R	residues 1 to 93 of 97 are 100.00 pct identical to residues 1 to 93 of 97 from Escherichia coli K-12 : B0735; hypothetical protein	complement(578728..579021)	Shigella flexneri 2a str. 2457T	1077012
NP_836274.1	CDS	cydB	NC_004741.1	579149	580288	R	residues 1 to 379 of 379 are 92.61 pct identical to residues 1 to 379 of 379 from Escherichia coli K-12 : B0734; cytochrome d terminal oxidase polypeptide subunit II	complement(579149..580288)	Shigella flexneri 2a str. 2457T	1080352
NP_836275.1	CDS	cydA	NC_004741.1	580304	581875	R	residues 1 to 523 of 523 are 99.80 pct identical to residues 1 to 523 of 523 from Escherichia coli K-12 : B0733; cytochrome d terminal oxidase, polypeptide subunit I	complement(580304..581875)	Shigella flexneri 2a str. 2457T	1077013
NP_836276.1	CDS	ybgG	NC_004741.1	582720	585353	R	residues 1 to 877 of 877 are 93.84 pct identical to residues 1 to 877 of 877 from Escherichia coli K-12 : B0732; alpha-mannosidase	complement(582720..585353)	Shigella flexneri 2a str. 2457T	1077014
NP_836277.1	CDS	hrsA	NC_004741.1	585371	587347	R	involved in the phosphorylation and transport of sugars across the cell membrane; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake; 2-O-a-mannosyl-D-glycerate specific PTS transporten components IIABC	complement(585371..587347)	Shigella flexneri 2a str. 2457T	1077015
NP_836278.1	CDS	farR	NC_004741.1	587457	588401	D	regulates the succiny-lCoA synthetase operon; DNA-binding transcriptional repressor MngR	587457..588401	Shigella flexneri 2a str. 2457T	1077016
NP_836279.1	CDS	sucD	NC_004741.1	588283	589152	R	Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha	complement(588283..589152)	Shigella flexneri 2a str. 2457T	1079055
NP_836280.1	CDS	sucC	NC_004741.1	589152	590318	R	catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta	complement(589152..590318)	Shigella flexneri 2a str. 2457T	1077017
NP_836281.1	CDS	sucB	NC_004741.1	590412	591629	R	component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA; dihydrolipoamide succinyltransferase	complement(590412..591629)	Shigella flexneri 2a str. 2457T	1077019
NP_836282.1	CDS	sucA	NC_004741.1	591644	594445	R	SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component	complement(591644..594445)	Shigella flexneri 2a str. 2457T	1077020
NP_836283.1	CDS	S0585	NC_004741.1	594427	594687	R	residues 1 to 86 of 86 are 100.00 pct identical to residues 1 to 86 of 86 from Escherichia coli K-12 : B0725; hypothetical protein	complement(594427..594687)	Shigella flexneri 2a str. 2457T	1077021
NP_836284.1	CDS	sdhB	NC_004741.1	594746	595462	R	part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit	complement(594746..595462)	Shigella flexneri 2a str. 2457T	1076493
NP_836285.1	CDS	sdhA	NC_004741.1	595478	597244	R	part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit	complement(595478..597244)	Shigella flexneri 2a str. 2457T	1079049
NP_836286.1	CDS	sdhD	NC_004741.1	597244	597591	R	residues 1 to 94 of 115 are 100.00 pct identical to residues 1 to 94 of 115 from Escherichia coli K-12 : B0722; succinate dehydrogenase cytochrome b556 small membrane subunit	complement(597244..597591)	Shigella flexneri 2a str. 2457T	1077022
NP_836287.2	CDS	sdhC	NC_004741.1	597585	597974	R	residues 6 to 134 of 134 are 99.22 pct identical to residues 1 to 129 of 129 from Escherichia coli K-12 : B0721; succinate dehydrogenase cytochrome b556 large membrane subunit	complement(597585..597974)	Shigella flexneri 2a str. 2457T	1077024
NP_836288.1	CDS	gltA	NC_004741.1	598683	599966	D	type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; type II citrate synthase	598683..599966	Shigella flexneri 2a str. 2457T	1079972
NP_836289.1	CDS	ybgD	NC_004741.1	600357	600923	D	residues 1 to 188 of 188 are 76.06 pct identical to residues 1 to 188 of 188 from Escherichia coli K-12 : B0719; fimbrial-like protein	600357..600923	Shigella flexneri 2a str. 2457T	1077025
NP_836290.1	CDS	ybgQ	NC_004741.1	600974	603433	D	residues 1 to 819 of 819 are 93.16 pct identical to residues 1 to 818 of 818 from Escherichia coli K-12 : B0718; outer membrane protein	600974..603433	Shigella flexneri 2a str. 2457T	1077026
NP_836291.1	CDS	ybgP	NC_004741.1	603448	604179	D	residues 1 to 242 of 243 are 87.19 pct identical to residues 1 to 242 of 242 from Escherichia coli K-12 : B0717; chaperone	603448..604179	Shigella flexneri 2a str. 2457T	1077027
NP_836292.1	CDS	abrB	NC_004741.1	605359	606450	D	residues 1 to 363 of 363 are 95.59 pct identical to residues 1 to 363 of 363 from Escherichia coli K-12 : B0715; transporter	605359..606450	Shigella flexneri 2a str. 2457T	1076462
NP_836293.1	CDS	nei	NC_004741.1	606447	607238	R	5-formyluracil/5-hydroxymethyluracil DNA glycosylase; involved in base excision repair of DNA damaged by oxidation or by mutagenic agents; acts as DNA glycosylase that recognizes and removes damaged bases with a preference for oxidized pyrimidines; has apurinic/apyrimidinic lyase activity; endonuclease VIII	complement(606447..607238)	Shigella flexneri 2a str. 2457T	1077029
NP_836294.1	CDS	ybgL	NC_004741.1	607274	608008	R	residues 1 to 244 of 244 are 92.62 pct identical to residues 1 to 244 of 244 from Escherichia coli K-12 : B0713; LamB/YcsF family protein	complement(607274..608008)	Shigella flexneri 2a str. 2457T	1076835
NP_836295.1	CDS	ybgJ	NC_004741.1	608924	609580	R	residues 1 to 218 of 218 are 99.08 pct identical to residues 1 to 218 of 218 from Escherichia coli K-12 : B0711; carboxylase	complement(608924..609580)	Shigella flexneri 2a str. 2457T	1077031
NP_836296.1	CDS	ybgI	NC_004741.1	609603	610346	R	residues 1 to 247 of 247 are 94.73 pct identical to residues 1 to 247 of 247 from Escherichia coli K-12 : B0710; hydrolase-oxidase	complement(609603..610346)	Shigella flexneri 2a str. 2457T	1077032
NP_836297.1	CDS	ybgH	NC_004741.1	610617	612098	D	residues 1 to 493 of 493 are 97.16 pct identical to residues 1 to 493 of 493 from Escherichia coli K-12 : B0709; transporter	610617..612098	Shigella flexneri 2a str. 2457T	1077033
NP_836298.1	CDS	phrB	NC_004741.1	612248	613666	R	UV-induced DNA repair; converts cyclobutane-type pyrimidine dimers created during exposure to UV ratiation to monomers; light dependent; deoxyribodipyrimidine photolyase	complement(612248..613666)	Shigella flexneri 2a str. 2457T	1077023
NP_836299.1	CDS	ybgA	NC_004741.1	613663	614172	R	residues 1 to 169 of 169 are 98.81 pct identical to residues 1 to 169 of 169 from Escherichia coli K-12 : B0707; hypothetical protein	complement(613663..614172)	Shigella flexneri 2a str. 2457T	1077034
NP_836300.1	CDS	S0604	NC_004741.1	614301	614588	D	no significant similarities; hypothetical protein	614301..614588	Shigella flexneri 2a str. 2457T	1077035
NP_836301.1	CDS	rhsE	NC_004741.1	615026	618412	R	residues 702 to 1008 of 1128 are 59.29 pct identical to residues 524 to 822 of 843 from GenPept : >emb|CAD08754.1| (AL627266) Rhs-family protein [Salmonella enterica subsp. enterica serovar Typhi]; Rhs-family protein	complement(615026..618412)	Shigella flexneri 2a str. 2457T	1077036
NP_836302.1	CDS	S0606	NC_004741.1	619028	619531	R	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri]; IS1 orfB	complement(619028..619531)	Shigella flexneri 2a str. 2457T	1077045
NP_836303.1	CDS	S0607	NC_004741.1	619450	619734	R	residues 1 to 94 of 94 are 79.78 pct identical to residues 1 to 94 of 94 from GenPept : >gb|AAF70018.1|AF250878_179 (AF250878) IS1 transposase [Salmonella typhi]; IS1 orfA	complement(619450..619734)	Shigella flexneri 2a str. 2457T	1080996
NP_836304.1	CDS	ybfA	NC_004741.1	620220	620426	R	residues 1 to 68 of 68 are 100.00 pct identical to residues 1 to 68 of 68 from Escherichia coli K-12 : B0699; hypothetical protein	complement(620220..620426)	Shigella flexneri 2a str. 2457T	1077037
NP_836305.1	CDS	kdpA	NC_004741.1	620828	622501	D	catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit A	620828..622501	Shigella flexneri 2a str. 2457T	1077038
NP_836306.1	CDS	kdpC	NC_004741.1	624580	625152	D	One of the components of the high-affinity ATP-driven potassium transport (or KDP)system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex; potassium-transporting ATPase subunit C	624580..625152	Shigella flexneri 2a str. 2457T	1077040
NP_836307.1	CDS	potE	NC_004741.1	631391	632710	D	catalyzes the uptake of putrescine via a proton symport mechanism, as well as the efflux of putrescine by a putrescine/ornithine antiport system; putrescine transporter	631391..632710	Shigella flexneri 2a str. 2457T	1078494
NP_836308.1	CDS	pgm	NC_004741.1	632766	634406	R	catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; phosphoglucomutase	complement(632766..634406)	Shigella flexneri 2a str. 2457T	1077044
NP_836309.1	CDS	seqA	NC_004741.1	634432	634977	R	negative modulator of the initiation of chromosome replication; replication initiation regulator SeqA	complement(634432..634977)	Shigella flexneri 2a str. 2457T	1077046
NP_836310.1	CDS	ybfF	NC_004741.1	635162	635926	D	residues 1 to 254 of 254 are 98.81 pct identical to residues 1 to 254 of 254 from Escherichia coli K-12 : B0686; hypothetical protein	635162..635926	Shigella flexneri 2a str. 2457T	1077047
NP_836311.1	CDS	ybfE	NC_004741.1	635997	636359	D	residues 1 to 120 of 120 are 85.00 pct identical to residues 1 to 120 of 120 from Escherichia coli K-12 : B0685; LexA regulated protein	635997..636359	Shigella flexneri 2a str. 2457T	1077048
NP_836312.1	CDS	fldA	NC_004741.1	636499	637029	D	An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin FldA	636499..637029	Shigella flexneri 2a str. 2457T	1077053
NP_836313.1	CDS	fur	NC_004741.1	637318	637764	D	negatively regulates a number of operons that encode enzymes involved in iron transport; activated by manganese; forms a homodimer; ferric uptake regulator	637318..637764	Shigella flexneri 2a str. 2457T	1077049
NP_836314.1	CDS	ybfN	NC_004741.1	637848	638174	R	residues 1 to 108 of 108 are 98.14 pct identical to residues 1 to 108 of 108 from Escherichia coli K-12 : B0682; hypothetical protein	complement(637848..638174)	Shigella flexneri 2a str. 2457T	1077050
NP_836315.1	CDS	ybfM	NC_004741.1	638211	639617	R	residues 1 to 468 of 468 are 99.14 pct identical to residues 1 to 468 of 468 from Escherichia coli K-12 : B0681; hypothetical protein	complement(638211..639617)	Shigella flexneri 2a str. 2457T	1077051
NP_836316.1	CDS	glnS	NC_004741.1	640196	641860	R	catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase	complement(640196..641860)	Shigella flexneri 2a str. 2457T	1077052
NP_836317.1	CDS	nagE	NC_004741.1	642063	644009	R	phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; N-acetyl glucosamine specific PTS system components IIABC	complement(642063..644009)	Shigella flexneri 2a str. 2457T	1077054
NP_836318.1	CDS	nagB	NC_004741.1	644342	645142	D	catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate; glucosamine-6-phosphate deaminase	644342..645142	Shigella flexneri 2a str. 2457T	1077056
NP_836319.1	CDS	nagA	NC_004741.1	645202	646350	D	catalyzes the formation of glucosamine 6-phosphate from N-acetylglucosamine 6-phosphate; N-acetylglucosamine-6-phosphate deacetylase	645202..646350	Shigella flexneri 2a str. 2457T	1077057
NP_836320.1	CDS	nagC	NC_004741.1	646359	647579	D	residues 1 to 406 of 406 are 100.00 pct identical to residues 1 to 406 of 406 from Escherichia coli K-12 : B0676; transcriptional repressor of nag (N-acetylglucosamine) operon	646359..647579	Shigella flexneri 2a str. 2457T	1077058
NP_836321.1	CDS	asnB	NC_004741.1	648776	650440	D	functions in asparagine biosynthesis; converts glutamine, aspartate, ATP, and water to glutamate, asparagine, pyrophosphate and AMP; asparagine synthetase B	648776..650440	Shigella flexneri 2a str. 2457T	1077060
NP_836322.1	CDS	ubiF	NC_004741.1	651676	652851	R	catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol; functions in the biosynthesis of ubiquinone or coenzyme Q; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase	complement(651676..652851)	Shigella flexneri 2a str. 2457T	1077070
NP_836323.1	CDS	yleA	NC_004741.1	652997	654421	D	residues 1 to 474 of 474 are 99.78 pct identical to residues 1 to 474 of 474 from Escherichia coli K-12 : B0661; hypothetical protein	652997..654421	Shigella flexneri 2a str. 2457T	1077071
NP_836324.1	CDS	ybeZ	NC_004741.1	654535	655614	D	residues 1 to 336 of 359 are 100.00 pct identical to residues 1 to 336 of 359 from Escherichia coli K-12 : B0660; ATP-binding protein in pho regulon	654535..655614	Shigella flexneri 2a str. 2457T	1077072
NP_836325.1	CDS	ybeY	NC_004741.1	655611	656078	D	residues 1 to 155 of 155 are 88.38 pct identical to residues 1 to 155 of 155 from Escherichia coli K-12 : B0659; metalloprotease	655611..656078	Shigella flexneri 2a str. 2457T	1077074
NP_836326.1	CDS	ybeX	NC_004741.1	656168	657046	D	residues 1 to 292 of 292 are 95.54 pct identical to residues 1 to 292 of 292 from Escherichia coli K-12 : B0658; transporter	656168..657046	Shigella flexneri 2a str. 2457T	1077075
NP_836327.1	CDS	lnt	NC_004741.1	657071	658609	D	Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase	657071..658609	Shigella flexneri 2a str. 2457T	1077076
NP_836328.1	CDS	ybeJ	NC_004741.1	659005	659913	D	residues 1 to 302 of 302 are 89.73 pct identical to residues 1 to 302 of 302 from Escherichia coli K-12 : B0655; glutamate and aspartate transporter subunit	659005..659913	Shigella flexneri 2a str. 2457T	1079280
NP_836329.1	CDS	gltJ	NC_004741.1	660083	660823	D	residues 1 to 246 of 246 are 99.18 pct identical to residues 1 to 246 of 246 from Escherichia coli K-12 : B0654; glutamate/aspartate transport system permease	660083..660823	Shigella flexneri 2a str. 2457T	1077077
NP_836330.1	CDS	gltK	NC_004741.1	660823	661497	D	residues 1 to 224 of 224 are 99.55 pct identical to residues 1 to 224 of 224 from Escherichia coli K-12 : B0653; glutamate/aspartate transport system permease	660823..661497	Shigella flexneri 2a str. 2457T	1077078
NP_836331.1	CDS	gltL	NC_004741.1	661497	662222	D	residues 1 to 241 of 241 are 94.60 pct identical to residues 1 to 241 of 241 from Escherichia coli K-12 : B0652; ATP-binding protein of glutamate/aspartate transport system	661497..662222	Shigella flexneri 2a str. 2457T	1077079
NP_836332.1	CDS	rihA	NC_004741.1	662340	663275	D	Hydrolyzes with equal efficiency cytidine or uridine to ribose and cytosine or uracil, respectively; pyrimidine-specific; ribonucleoside hydrolase 1	662340..663275	Shigella flexneri 2a str. 2457T	1077080
NP_836333.1	CDS	ybeV	NC_004741.1	665089	666540	R	residues 1 to 483 of 483 are 92.13 pct identical to residues 1 to 483 of 483 from Escherichia coli K-12 : B0649; hypothetical protein	complement(665089..666540)	Shigella flexneri 2a str. 2457T	1077084
NP_836334.1	CDS	ybeU	NC_004741.1	666537	667244	R	residues 1 to 235 of 235 are 96.59 pct identical to residues 1 to 235 of 235 from Escherichia coli K-12 : B0648; tRNA ligase	complement(666537..667244)	Shigella flexneri 2a str. 2457T	1077085
NP_836335.1	CDS	ybeT	NC_004741.1	667346	667900	D	residues 1 to 184 of 184 are 97.28 pct identical to residues 1 to 184 of 184 from Escherichia coli K-12 : B0647; hypothetical protein	667346..667900	Shigella flexneri 2a str. 2457T	1077086
NP_836336.1	CDS	ybeS	NC_004741.1	667910	669337	R	residues 1 to 475 of 475 are 93.68 pct identical to residues 1 to 475 of 475 from Escherichia coli K-12 : B0646; involved in polynucleotide modification; enzyme	complement(667910..669337)	Shigella flexneri 2a str. 2457T	1077088
NP_836337.1	CDS	ybeR	NC_004741.1	669334	670041	R	residues 1 to 235 of 235 are 93.19 pct identical to residues 1 to 235 of 235 from Escherichia coli K-12 : B0645; hypothetical protein	complement(669334..670041)	Shigella flexneri 2a str. 2457T	1077089
NP_836338.1	CDS	ybeQ	NC_004741.1	670199	671182	D	residues 1 to 327 of 327 are 96.63 pct identical to residues 1 to 327 of 327 from Escherichia coli K-12 : B0644; hypothetical protein	670199..671182	Shigella flexneri 2a str. 2457T	1077090
NP_836339.1	CDS	ybeL	NC_004741.1	671252	671734	R	residues 1 to 160 of 160 are 97.50 pct identical to residues 1 to 160 of 160 from Escherichia coli K-12 : B0643; hypothetical protein	complement(671252..671734)	Shigella flexneri 2a str. 2457T	1077091
NP_836340.1	CDS	leuS	NC_004741.1	671969	674551	D	leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase	671969..674551	Shigella flexneri 2a str. 2457T	1080411
NP_836341.1	CDS	rlpB	NC_004741.1	674566	675147	D	rare lipoprotein B; involved in the assembly of LPS in the outer membrane; LPS-assembly lipoprotein RlpB	674566..675147	Shigella flexneri 2a str. 2457T	1077092
NP_836342.1	CDS	holA	NC_004741.1	675147	676178	D	required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta	675147..676178	Shigella flexneri 2a str. 2457T	1077093
NP_836343.1	CDS	nadD	NC_004741.1	676180	676821	D	transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria; nicotinic acid mononucleotide adenylyltransferase	676180..676821	Shigella flexneri 2a str. 2457T	1077094
NP_836344.1	CDS	phpB	NC_004741.1	676845	677456	D	residues 1 to 203 of 203 are 96.55 pct identical to residues 1 to 203 of 203 from Escherichia coli K-12 : B0638; alpha-ribazole phosphatase	676845..677456	Shigella flexneri 2a str. 2457T	1077087
NP_836345.1	CDS	ybeB	NC_004741.1	677824	678033	D	residues 1 to 69 of 69 are 100.00 pct identical to residues 1 to 69 of 69 from Escherichia coli K-12 : B0637; hypothetical protein	677824..678033	Shigella flexneri 2a str. 2457T	1077073
NP_836346.1	CDS	ybeA	NC_004741.1	678037	678504	D	SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase	678037..678504	Shigella flexneri 2a str. 2457T	1077097
NP_836347.1	CDS	mrdA	NC_004741.1	678535	680436	D	residues 1 to 633 of 633 are 99.68 pct identical to residues 1 to 633 of 633 from Escherichia coli K-12 : B0635; involved in cell elongation, ephase; penicillin-binding protein 2	678535..680436	Shigella flexneri 2a str. 2457T	1077098
NP_836348.1	CDS	mrdB	NC_004741.1	680439	681551	D	residues 1 to 370 of 370 are 80.81 pct identical to residues 1 to 370 of 370 from Escherichia coli K-12 : B0634; sensitiveto radiation and drugs; cell wall shape-determining protein	680439..681551	Shigella flexneri 2a str. 2457T	1077099
NP_836349.1	CDS	rlpA	NC_004741.1	681562	682650	D	residues 1 to 362 of 362 are 90.60 pct identical to residues 1 to 362 of 362 from Escherichia coli K-12 : B0633; rare lipoprotein A	681562..682650	Shigella flexneri 2a str. 2457T	1080410
NP_836350.1	CDS	dacA	NC_004741.1	682789	684000	D	penicillin-binding protein 5; removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors; D-alanyl-D-alanine carboxypeptidase	682789..684000	Shigella flexneri 2a str. 2457T	1077100
NP_836351.1	CDS	ybeD	NC_004741.1	684111	684374	D	residues 1 to 87 of 87 are 100.00 pct identical to residues 1 to 87 of 87 from Escherichia coli K-12 : B0631; hypothetical protein	684111..684374	Shigella flexneri 2a str. 2457T	1078112
NP_836352.2	CDS	lipB	NC_004741.1	684475	685116	D	lipoyl-[acyl-carrier protein]-protein-N-lipoyltransferse; lipoate-protein ligase B; transfers lipoate to apolipoproteins; involved in lipoate metabolism; lipoyltransferase	684475..685116	Shigella flexneri 2a str. 2457T	1077101
NP_836353.1	CDS	ybeF	NC_004741.1	685528	686328	D	residues 1 to 266 of 266 are 98.87 pct identical to residues 1 to 266 of 266 from Escherichia coli K-12 : B0629; DNA-binding transcriptional regulator	685528..686328	Shigella flexneri 2a str. 2457T	1077102
NP_836354.1	CDS	lipA	NC_004741.1	686537	687502	D	catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase	686537..687502	Shigella flexneri 2a str. 2457T	1077103
NP_836355.1	CDS	tatE	NC_004741.1	687603	687806	R	TatE; similar to TatA and found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin arginine translocase E	complement(687603..687806)	Shigella flexneri 2a str. 2457T	1077104
NP_836356.1	CDS	ybeM	NC_004741.1	687935	688498	R	residues 1 to 187 of 187 are 94.11 pct identical to residues 1 to 187 of 187 from Escherichia coli K-12 : B0626; amidase	complement(687935..688498)	Shigella flexneri 2a str. 2457T	1077105
NP_836357.1	CDS	ccrB	NC_004741.1	688816	689199	D	may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB	688816..689199	Shigella flexneri 2a str. 2457T	1077107
NP_836358.1	CDS	cspE	NC_004741.1	689253	689462	R	member of the CspA family; constitutively expressed RNA/ssDNA-binding protein; functions in helping cells adapt to low temperature; aids nucleic acid melting; participates in gene regulation; can act as a transcription antiterminator; cold shock protein CspE	complement(689253..689462)	Shigella flexneri 2a str. 2457T	1078238
NP_836359.1	CDS	pagP	NC_004741.1	689637	690197	R	catalyzes the transfer of palmitate to lipid A; palmitoyl transferase	complement(689637..690197)	Shigella flexneri 2a str. 2457T	1077108
NP_836360.1	CDS	dcuC	NC_004741.1	690786	692171	D	responsible for the transport of C4-dicarboxylates during anaerobic growth; C4-dicarboxylate transporter DcuC	690786..692171	Shigella flexneri 2a str. 2457T	1077109
NP_836361.1	CDS	S0684	NC_004741.1	692891	693400	R	residues 20 to 169 of 169 are 35.08 pct identical to residues 4 to 174 of 174 from GenPept : >gb|AAF01132.1|AF083977_53 (AF083977) c-repressor [Enterobacteria phage Mu]; repressor protein	complement(692891..693400)	Shigella flexneri 2a str. 2457T	1077113
NP_836362.1	CDS	S0685	NC_004741.1	693963	695417	D	residues 1 to 484 of 484 are 96.90 pct identical to residues 62 to 545 of 663 from GenPept : >gb|AAF01083.1|AF083977_2 (AF083977) A [Enterobacteria phage Mu]; phage transposase	693963..695417	Shigella flexneri 2a str. 2457T	1077114
NP_836363.1	CDS	S0686	NC_004741.1	695479	695781	D	residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAL72452.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS600 orfA	695479..695781	Shigella flexneri 2a str. 2457T	1077115
NP_836364.1	CDS	S0687	NC_004741.1	695922	696635	D	residues 1 to 237 of 237 are 99.57 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAL72454.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS600 orfB	695922..696635	Shigella flexneri 2a str. 2457T	1080944
NP_836365.1	CDS	S0688	NC_004741.1	696632	696877	R	residues 1 to 50 of 81 are 68.62 pct identical to residues 1 to 51 of 122 from GenPept : >emb|CAD05577.1| (AL627272)  bacteriophage protein [Salmonella enterica subsp. enterica serovar Typhi]; hypothetical protein	complement(696632..696877)	Shigella flexneri 2a str. 2457T	1080945
NP_836366.1	CDS	S0689	NC_004741.1	696919	697860	R	residues 1 to 313 of 313 are 97.76 pct identical to residues 1 to 313 of 313 from GenPept : >emb|CAD05445.1| (AL627268)  bacteriophage protein [Salmonella enterica subsp. enterica serovar Typhi]; bacteriophage protein	complement(696919..697860)	Shigella flexneri 2a str. 2457T	1077116
NP_836367.1	CDS	S0690	NC_004741.1	697872	697973	R	residues 1 to 33 of 33 are 100.00 pct identical to residues 136 to 168 of 168 from GenPept : >emb|CAD05444.1| (AL627268)  bacteriophage protein [Salmonella enterica subsp. enterica serovar Typhi]; hypothetical protein	complement(697872..697973)	Shigella flexneri 2a str. 2457T	1077117
NP_836368.1	CDS	S0691	NC_004741.1	698005	698361	R	residues 1 to 116 of 118 are 100.00 pct identical to residues 1 to 116 of 168 from GenPept : >emb|CAD05444.1| (AL627268)  bacteriophage protein [Salmonella enterica subsp. enterica serovar Typhi]; bacteriophage protein	complement(698005..698361)	Shigella flexneri 2a str. 2457T	1077118
NP_836369.1	CDS	S0692	NC_004741.1	698365	699585	R	residues 1 to 406 of 406 are 89.90 pct identical to residues 1 to 406 of 406 from GenPept : >emb|CAD05443.1| (AL627268)  bacteriophage protein [Salmonella enterica subsp. enterica serovar Typhi]; bacteriophage protein	complement(698365..699585)	Shigella flexneri 2a str. 2457T	1077119
NP_836370.1	CDS	S0693	NC_004741.1	699589	700047	R	residues 2 to 141 of 152 are 86.42 pct identical to residues 29 to 168 of 176 from GenPept : >emb|CAD05581.1| (AL627272) conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi]; bacteriophage protein	complement(699589..700047)	Shigella flexneri 2a str. 2457T	1077120
NP_836371.1	CDS	S0694	NC_004741.1	700223	701689	R	residues 1 to 488 of 488 are 96.72 pct identical to residues 1 to 488 of 488 from GenPept : >emb|CAD05582.1| (AL627272) conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi]; bacteriophage protein	complement(700223..701689)	Shigella flexneri 2a str. 2457T	1077121
NP_836372.1	CDS	S0695	NC_004741.1	701689	701922	R	residues 1 to 77 of 77 are 81.81 pct identical to residues 391 to 467 of 467 from GenPept : >emb|CAD05583.1| (AL627272)  bacteriophage protein [Salmonella enterica subsp. enterica serovar Typhi]; hypothetical protein	complement(701689..701922)	Shigella flexneri 2a str. 2457T	1077122
NP_836373.1	CDS	S0696	NC_004741.1	701910	702449	R	residues 10 to 167 of 179 are 96.20 pct identical to residues 222 to 379 of 467 from GenPept : >emb|CAD05583.1| (AL627272)  bacteriophage protein [Salmonella enterica subsp. enterica serovar Typhi]; bacteriophage protein	complement(701910..702449)	Shigella flexneri 2a str. 2457T	1077123
NP_836374.2	CDS	S0697	NC_004741.1	702434	703339	R	IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats; insertion element IS2 transposase InsD	complement(702434..703339)	Shigella flexneri 2a str. 2457T	1077124
NP_836375.2	CDS	S0698	NC_004741.1	703297	703662	R	IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats; insertion sequence 2 OrfA protein	complement(703297..703662)	Shigella flexneri 2a str. 2457T	1077125
NP_836376.1	CDS	S0699	NC_004741.1	703738	704361	R	residues 2 to 203 of 207 are 99.50 pct identical to residues 22 to 223 of 467 from GenPept : >emb|CAD05583.1| (AL627272)  bacteriophage protein [Salmonella enterica subsp. enterica serovar Typhi]; bacteriophage protein	complement(703738..704361)	Shigella flexneri 2a str. 2457T	1077126
NP_836377.1	CDS	S0700	NC_004741.1	704372	705136	R	residues 1 to 249 of 254 are 97.18 pct identical to residues 1 to 249 of 249 from GenPept : >emb|CAD05584.1| (AL627272)  bacteriophage protein [Salmonella enterica subsp. enterica serovar Typhi]; bacteriophage protein	complement(704372..705136)	Shigella flexneri 2a str. 2457T	1077129
NP_836378.1	CDS	S0701	NC_004741.1	705206	705832	R	residues 1 to 208 of 208 are 100.00 pct identical to residues 72 to 279 of 279 from GenPept : >gb|AAL72449.1| (AF386526) InsB [Shigella flexneri 2a]; partial; IS911 orfB	complement(705206..705832)	Shigella flexneri 2a str. 2457T	1077128
NP_836379.1	CDS	S0702	NC_004741.1	705829	706029	R	partial; IS911 orfB	complement(705829..706029)	Shigella flexneri 2a str. 2457T	1077127
NP_836380.1	CDS	S0703	NC_004741.1	706072	706374	R	residues 1 to 100 of 100 are 100.00 pct identical to residues 13 to 112 of 112 from GenPept : >gb|AAL72382.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS911 orfA	complement(706072..706374)	Shigella flexneri 2a str. 2457T	1077130
NP_836381.1	CDS	S0704	NC_004741.1	706519	706692	D	residues 1 to 55 of 57 are 90.90 pct identical to residues 100 to 154 of 155 from GenPept : >gb|AAG55117.1|AE005256_8 (AE005256)  endopeptidase Rz of prophage CP-933K [Escherichia coli O157:H7 EDL933]; partial; hypothetical protein	706519..706692	Shigella flexneri 2a str. 2457T	1077131
NP_836382.1	CDS	S0705	NC_004741.1	707502	707804	D	residues 1 to 100 of 100 are 100.00 pct identical to residues 13 to 112 of 112 from GenPept : >gb|AAL72382.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS911 orfA	707502..707804	Shigella flexneri 2a str. 2457T	1077587
NP_836383.1	CDS	S0706	NC_004741.1	707847	708047	D	partial; IS911 orfB	707847..708047	Shigella flexneri 2a str. 2457T	1077132
NP_836384.1	CDS	S0707	NC_004741.1	708044	708202	D	residues 1 to 43 of 52 are 97.67 pct identical to residues 72 to 114 of 279 from GenPept : >gb|AAL72449.1| (AF386526) InsB [Shigella flexneri 2a]; partial; IS911 orfB	708044..708202	Shigella flexneri 2a str. 2457T	1077083
NP_836385.1	CDS	S0708	NC_004741.1	708293	708667	D	residues 1 to 124 of 124 are 100.00 pct identical to residues 156 to 279 of 279 from GenPept : >gb|AAL72449.1| (AF386526) InsB [Shigella flexneri 2a]; partial; IS911 orfB	708293..708667	Shigella flexneri 2a str. 2457T	1077133
NP_836386.1	CDS	S0709	NC_004741.1	708696	709118	D	residues 1 to 140 of 140 are 88.57 pct identical to residues 49 to 188 of 188 from GenPept : >gb|AAG56172.1|AE005347_4 (AE005347) unknown protein encoded within prophage CP-933O [Escherichia coli O157:H7 EDL933]; bacteriophage protein	708696..709118	Shigella flexneri 2a str. 2457T	1077134
NP_836387.1	CDS	ybcR	NC_004741.1	710297	710389	D	residues 1 to 30 of 30 are 89.99 pct identical to residues 1 to 30 of 71 from GenPept : >gb|AAA32349.1| (M65239) S [Bacteriophage 21]; hypothetical protein	710297..710389	Shigella flexneri 2a str. 2457T	1077139
NP_836388.1	CDS	S0715	NC_004741.1	710430	711116	R	residues 1 to 228 of 228 are 87.34 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAL72453.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS600 orfB	complement(710430..711116)	Shigella flexneri 2a str. 2457T	1077140
NP_836389.1	CDS	S0716	NC_004741.1	711257	711559	R	residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAL72452.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS600 orfA	complement(711257..711559)	Shigella flexneri 2a str. 2457T	1077141
NP_836390.1	CDS	S0718	NC_004741.1	711835	713694	D	residues 368 to 567 of 619 are 29.32 pct identical to residues 690 to 895 of 916 from GenPept : >gb|AAF10830.1|AE001973_3 (AE001973) SNF2/Rad54 helicase-related protein [Deinococcus radiodurans]; bacteriophage protein	711835..713694	Shigella flexneri 2a str. 2457T	1077142
NP_836391.1	CDS	S0719	NC_004741.1	713669	714295	R	residues 1 to 208 of 208 are 100.00 pct identical to residues 72 to 279 of 279 from GenPept : >gb|AAL72449.1| (AF386526) InsB [Shigella flexneri 2a]; partial; IS911 orfB	complement(713669..714295)	Shigella flexneri 2a str. 2457T	1077143
NP_836392.1	CDS	S0720	NC_004741.1	714292	714492	R	partial; IS911 orfB	complement(714292..714492)	Shigella flexneri 2a str. 2457T	1077144
NP_836393.1	CDS	S0721	NC_004741.1	714535	714837	R	residues 1 to 100 of 100 are 100.00 pct identical to residues 13 to 112 of 112 from GenPept : >gb|AAL72382.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS911 orfA	complement(714535..714837)	Shigella flexneri 2a str. 2457T	1078460
NP_836394.1	CDS	S0722	NC_004741.1	714930	715808	D	residues 41 to 292 of 292 are 95.63 pct identical to residues 1 to 252 of 252 from GenPept : >emb|CAC83536.1| (AJ298298)  replication protein DnaC [Bacteriophage P27]; replication protein DnaC	714930..715808	Shigella flexneri 2a str. 2457T	1077145
NP_836395.1	CDS	S0723	NC_004741.1	715805	717196	D	residues 1 to 463 of 463 are 90.49 pct identical to residues 1 to 463 of 463 from GenPept : >emb|CAC83537.1| (AJ298298)  helicase [Bacteriophage P27]; helicase	715805..717196	Shigella flexneri 2a str. 2457T	1077146
NP_836396.1	CDS	S0724	NC_004741.1	717193	717450	D	residues 6 to 85 of 85 are 93.75 pct identical to residues 1 to 80 of 80 from GenPept : >emb|CAC83538.1| (AJ298298) hypothetical protein [Bacteriophage P27]; bacteriophage protein	717193..717450	Shigella flexneri 2a str. 2457T	1077147
NP_836397.1	CDS	S0725	NC_004741.1	717545	717745	D	residues 1 to 66 of 66 are 63.63 pct identical to residues 1 to 64 of 64 from GenPept : >gb|AAD04654.1| (AF034975) nin orf-59 [Bacteriophage H-19B]; homologous to ninH gene; bacteriophage protein	717545..717745	Shigella flexneri 2a str. 2457T	1077148
NP_836398.1	CDS	ybcQ	NC_004741.1	717738	718118	D	residues 1 to 124 of 126 are 77.41 pct identical to residues 1 to 124 of 144 from GenPept : >gb|AAD04655.1| (AF034975) Q protein [Bacteriophage H-19B]; Q protein	717738..718118	Shigella flexneri 2a str. 2457T	1077149
NP_836399.1	CDS	S0731	NC_004741.1	718921	719136	D	residues 1 to 71 of 71 are 74.64 pct identical to residues 1 to 71 of 71 from GenPept : >gb|AAA32349.1| (M65239) S [Bacteriophage 21]; S protein	718921..719136	Shigella flexneri 2a str. 2457T	1080348
NP_836400.1	CDS	S0732	NC_004741.1	719140	719769	D	no significant similarities; hypothetical protein	719140..719769	Shigella flexneri 2a str. 2457T	1077154
NP_836401.1	CDS	S0733	NC_004741.1	719835	720368	D	residues 1 to 177 of 177 are 83.61 pct identical to residues 1 to 177 of 177 from GenPept : >gb|AAG55897.1|AE005323_13 (AE005323)  endolysin of prophage CP-933N [Escherichia coli O157:H7 EDL933]; endolysin R of prophage CP-933V	719835..720368	Shigella flexneri 2a str. 2457T	1077155
NP_836402.1	CDS	S0734	NC_004741.1	720365	720769	D	residues 1 to 134 of 134 are 96.26 pct identical to residues 1 to 134 of 155 from GenPept : >gb|AAK28885.1|AF335538_37 (AF335538) endopeptidase [Bacteriophage HK620]; endopeptidase	720365..720769	Shigella flexneri 2a str. 2457T	1077156
NP_836403.1	CDS	S0735	NC_004741.1	720831	721133	D	residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAF09029.1| (AF139596) unknown [Shigella flexneri]; IS600 orfA	720831..721133	Shigella flexneri 2a str. 2457T	1077157
NP_836404.1	CDS	S0736	NC_004741.1	721274	721987	D	residues 1 to 237 of 237 are 91.13 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAL72453.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS600 orfB	721274..721987	Shigella flexneri 2a str. 2457T	1077159
NP_836405.1	CDS	S0737	NC_004741.1	722310	724220	D	residues 1 to 625 of 636 are 91.20 pct identical to residues 13 to 636 of 654 from GenPept : >gb|AAG56410.1|AE005368_16 (AE005368)  DNA packaging protein of prophage CP-933R; terminase large subunit [Escherichia coli O157:H7 EDL933]; DNA packaging protein of prophage CP-933R; terminase large subunit	722310..724220	Shigella flexneri 2a str. 2457T	1077160
NP_836406.1	CDS	S0738	NC_004741.1	724221	724424	D	residues 1 to 67 of 67 are 79.41 pct identical to residues 1 to 68 of 68 from GenPept : >gb|AAA32341.1| (M81255) head completion protein gp3 [Bacteriophage 21]; head completion protein gp3	724221..724424	Shigella flexneri 2a str. 2457T	1077161
NP_836407.1	CDS	S0739	NC_004741.1	724421	725476	D	residues 1 to 331 of 351 are 94.25 pct identical to residues 1 to 331 of 530 from GenPept : >gb|AAA32342.1| (M81255) head-tail preconnector gp5 [Bacteriophage 21]; head-tail preconnector gp5	724421..725476	Shigella flexneri 2a str. 2457T	1077162
NP_836408.1	CDS	S0740	NC_004741.1	725391	726014	D	residues 2 to 193 of 207 are 93.75 pct identical to residues 325 to 516 of 530 from GenPept : >gb|AAA32342.1| (M81255) head-tail preconnector gp5 [Bacteriophage 21]; head-tail preconnector gp5	725391..726014	Shigella flexneri 2a str. 2457T	1077702
NP_836409.1	CDS	S0741	NC_004741.1	726004	727509	D	residues 1 to 501 of 501 are 88.62 pct identical to residues 1 to 501 of 501 from GenPept : >gb|AAA32343.1| (M81255) head-tail preconnector gp5 [Bacteriophage 21]; head-tail preconnector gp5	726004..727509	Shigella flexneri 2a str. 2457T	1077163
NP_836410.1	CDS	S0742	NC_004741.1	727546	727893	D	residues 1 to 115 of 115 are 93.04 pct identical to residues 1 to 115 of 115 from GenPept : >gb|AAA32345.1| (M81255) capsid protein small subunit [Bacteriophage 21]; capsid protein small subunit	727546..727893	Shigella flexneri 2a str. 2457T	1077164
NP_836411.1	CDS	S0743	NC_004741.1	727951	728979	D	residues 1 to 342 of 342 are 90.35 pct identical to residues 1 to 342 of 342 from GenPept : >gb|AAA32346.1| (M81255) major capsid protein [Bacteriophage 21]; major capsid protein	727951..728979	Shigella flexneri 2a str. 2457T	1077165
NP_836412.1	CDS	S0744	NC_004741.1	729031	729417	D	residues 3 to 128 of 128 are 37.40 pct identical to residues 2 to 132 of 132 from GenPept : >gb|AAA96541.1| (J02459) Fi (DNA packaging;117) [bacteriophage lambda]; DNA-packaging protein	729031..729417	Shigella flexneri 2a str. 2457T	1077166
NP_836413.1	CDS	S0745	NC_004741.1	729429	729806	D	residues 1 to 117 of 125 are 57.26 pct identical to residues 1 to 117 of 117 from GenPept : >gb|AAA96542.1| (J02459) Fii (head-tail joining;117) [bacteriophage lambda]; tail attachment protein	729429..729806	Shigella flexneri 2a str. 2457T	1077167
NP_836414.1	CDS	S0746	NC_004741.1	729793	730377	D	residues 1 to 194 of 194 are 84.53 pct identical to residues 1 to 192 of 192 from GenPept : >gb|AAG55126.1|AE005257_5 (AE005257)  tail component of prophage CP-933K [Escherichia coli O157:H7 EDL933]; tail component of prophage CP-933K	729793..730377	Shigella flexneri 2a str. 2457T	1077168
NP_836415.1	CDS	S0747	NC_004741.1	730374	730775	D	residues 1 to 133 of 133 are 96.99 pct identical to residues 1 to 133 of 133 from GenPept : >gb|AAG55127.1|AE005257_6 (AE005257)  tail component of prophage CP-933K [Escherichia coli O157:H7 EDL933]; tail component of prophage CP-933K	730374..730775	Shigella flexneri 2a str. 2457T	1077169
NP_836416.1	CDS	S0748	NC_004741.1	730786	731526	D	residues 1 to 245 of 246 are 82.85 pct identical to residues 3 to 247 of 249 from GenPept : >gb|AAG55128.1|AE005257_7 (AE005257)  tail component of prophage CP-933K [Escherichia coli O157:H7 EDL933]; tail component of prophage CP-933K	730786..731526	Shigella flexneri 2a str. 2457T	1077170
NP_836417.1	CDS	S0749	NC_004741.1	731585	731971	D	residues 1 to 128 of 128 are 92.18 pct identical to residues 5 to 132 of 132 from GenPept : >gb|AAG55129.1|AE005257_8 (AE005257)  tail component of prophage CP-933K [Escherichia coli O157:H7 EDL933]; tail component of prophage CP-933K	731585..731971	Shigella flexneri 2a str. 2457T	1077171
NP_836418.1	CDS	S0750	NC_004741.1	732034	732309	D	residues 1 to 91 of 91 are 98.90 pct identical to residues 15 to 105 of 105 from GenPept : >gb|AAG55130.1|AE005257_9 (AE005257)  tail component of prophage CP-933K [Escherichia coli O157:H7 EDL933]; tail component of prophage CP-933K	732034..732309	Shigella flexneri 2a str. 2457T	1077172
NP_836419.1	CDS	S0751	NC_004741.1	732281	735322	D	residues 1 to 1013 of 1013 are 78.64 pct identical to residues 1 to 1021 of 1021 from GenPept : >dbj|BAB34260.1| (AP002553)  tail length tape measure protein precursor [Escherichia coli O157:H7]; tail length tape measure protein precursor	732281..735322	Shigella flexneri 2a str. 2457T	1077173
NP_836420.1	CDS	S0752	NC_004741.1	735322	735651	D	residues 1 to 108 of 109 are 97.22 pct identical to residues 1 to 108 of 109 from GenPept : >dbj|BAB34261.1| (AP002553)  minor tail protein [Escherichia coli O157:H7]; minor tail protein	735322..735651	Shigella flexneri 2a str. 2457T	1080995
NP_836421.1	CDS	S0753	NC_004741.1	735651	736349	D	residues 1 to 232 of 232 are 90.51 pct identical to residues 1 to 232 of 232 from GenPept : >dbj|BAB35068.1| (AP002555) minor tail protein [Escherichia coli O157:H7]; minor tail protein	735651..736349	Shigella flexneri 2a str. 2457T	1077174
NP_836422.1	CDS	S0754	NC_004741.1	736498	737097	D	residues 1 to 199 of 199 are 96.98 pct identical to residues 26 to 224 of 224 from GenPept : >gb|AAG55134.1|AE005257_13 (AE005257)  tail component of prophage CP-933K [Escherichia coli O157:H7 EDL933]; tail assembly protein	736498..737097	Shigella flexneri 2a str. 2457T	1080350
NP_836423.1	CDS	S0755	NC_004741.1	737094	737636	D	residues 1 to 180 of 180 are 85.71 pct identical to residues 34 to 215 of 215 from GenPept : >gb|AAG55135.1|AE005257_14 (AE005257)  tail component of prophage CP-933K [Escherichia coli O157:H7 EDL933]; tail component	737094..737636	Shigella flexneri 2a str. 2457T	1077175
NP_836424.1	CDS	S0756	NC_004741.1	737697	741176	D	residues 1 to 1159 of 1159 are 85.13 pct identical to residues 1 to 1132 of 1132 from GenPept : >dbj|BAB35071.1| (AP002555) host specificity protein [Escherichia coli O157:H7]; host specificity protein	737697..741176	Shigella flexneri 2a str. 2457T	1077176
NP_836425.1	CDS	S0757	NC_004741.1	741244	741843	D	residues 1 to 199 of 199 are 93.46 pct identical to residues 1 to 199 of 199 from GenPept : >dbj|BAB35072.1| (AP002555)  membrane protein precursor [Escherichia coli O157:H7]; membrane protein precursor	741244..741843	Shigella flexneri 2a str. 2457T	1077177
NP_836426.1	CDS	S0758	NC_004741.1	741907	742968	D	residues 1 to 291 of 353 are 39.11 pct identical to residues 1 to 294 of 490 from GenPept : >emb|CAC83574.1| (AJ298298)  tail fiber protein [Bacteriophage P27]; tail component encoded by cryptic prophage CP-933M	741907..742968	Shigella flexneri 2a str. 2457T	1077178
NP_836427.1	CDS	S0759	NC_004741.1	743269	743892	D	residues 21 to 207 of 207 are 68.44 pct identical to residues 2 to 188 of 188 from GenPept : >emb|CAC83575.1| (AJ298298) hypothetical protein [Bacteriophage P27]; tail component of prophage CP-933K	743269..743892	Shigella flexneri 2a str. 2457T	1077179
NP_836428.1	CDS	S0763	NC_004741.1	745944	746123	D	no significant similarities; hypothetical protein	745944..746123	Shigella flexneri 2a str. 2457T	1077181
NP_836429.1	CDS	ybhB	NC_004741.1	746417	746893	R	YbhB; similar to rat and human kinase inhibitory proteins; kinase inhibitor protein	complement(746417..746893)	Shigella flexneri 2a str. 2457T	1077182
NP_836430.1	CDS	bioA	NC_004741.1	746952	748241	R	catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate; adenosylmethionine-8-amino-7-oxononanoate aminotransferase	complement(746952..748241)	Shigella flexneri 2a str. 2457T	1077235
NP_836431.1	CDS	bioB	NC_004741.1	748328	749368	D	residues 1 to 346 of 346 are 99.42 pct identical to residues 1 to 346 of 346 from Escherichia coli K-12 : B0775; biotin synthase	748328..749368	Shigella flexneri 2a str. 2457T	1077183
NP_836432.1	CDS	bioF	NC_004741.1	749365	750519	D	catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine; 8-amino-7-oxononanoate synthase	749365..750519	Shigella flexneri 2a str. 2457T	1077184
NP_836433.1	CDS	bioC	NC_004741.1	750506	751261	D	methyltransferase; acyl carrier protein involved in an unidentified step in the synthesis of pimeloyl-CoA, a biotin precursor; member of the bio operon (bioABFCD); in Escherichia coli, bioC-null mutants require biotin for growth; biotin biosynthesis protein BioC	750506..751261	Shigella flexneri 2a str. 2457T	1077185
NP_836434.1	CDS	bioD	NC_004741.1	751254	751931	D	DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase	751254..751931	Shigella flexneri 2a str. 2457T	1077187
NP_836435.1	CDS	uvrB	NC_004741.1	752510	754531	D	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B	752510..754531	Shigella flexneri 2a str. 2457T	1077188
NP_836436.1	CDS	ybhK	NC_004741.1	754723	755631	R	residues 1 to 302 of 302 are 91.39 pct identical to residues 1 to 302 of 302 from Escherichia coli K-12 : B0780; structural protein	complement(754723..755631)	Shigella flexneri 2a str. 2457T	1080351
NP_836437.1	CDS	moaA	NC_004741.1	756028	757017	D	together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A	756028..757017	Shigella flexneri 2a str. 2457T	1077189
NP_836438.1	CDS	moaB	NC_004741.1	757039	757551	D	residues 1 to 170 of 170 are 99.41 pct identical to residues 1 to 170 of 170 from Escherichia coli K-12 : B0782; molybdopterin biosynthesis protein B	757039..757551	Shigella flexneri 2a str. 2457T	1077190
NP_836439.1	CDS	moaC	NC_004741.1	757554	758039	D	MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein C	757554..758039	Shigella flexneri 2a str. 2457T	1077192
NP_836440.1	CDS	moaD	NC_004741.1	758032	758277	D	catalyzes the conversion of molybdopterin precursor Z into molybdopterin; molybdopterin synthase small subunit	758032..758277	Shigella flexneri 2a str. 2457T	1077193
NP_836441.1	CDS	moaE	NC_004741.1	758279	758731	D	catalyzes the conversion of molybdopterin precursor Z into molybdopterin; molybdopterin synthase large subunit	758279..758731	Shigella flexneri 2a str. 2457T	1077194
NP_836442.1	CDS	ybhL	NC_004741.1	758868	759572	D	residues 1 to 234 of 234 are 93.16 pct identical to residues 1 to 234 of 234 from Escherichia coli K-12 : B0786; hypothetical protein	758868..759572	Shigella flexneri 2a str. 2457T	1077195
NP_836443.1	CDS	ybhM	NC_004741.1	759777	760490	D	residues 1 to 237 of 237 are 80.16 pct identical to residues 1 to 237 of 237 from Escherichia coli K-12 : B0787; hypothetical protein	759777..760490	Shigella flexneri 2a str. 2457T	1077196
NP_836444.1	CDS	ybhN	NC_004741.1	760526	761482	R	residues 1 to 318 of 318 are 78.30 pct identical to residues 1 to 318 of 318 from Escherichia coli K-12 : B0788; hypothetical protein	complement(760526..761482)	Shigella flexneri 2a str. 2457T	1077197
NP_836445.1	CDS	ybhO	NC_004741.1	761482	762723	R	residues 1 to 413 of 413 are 91.76 pct identical to residues 1 to 413 of 413 from Escherichia coli K-12 : B0789; cardiolipin synthase 2	complement(761482..762723)	Shigella flexneri 2a str. 2457T	1077198
NP_836446.1	CDS	ybhP	NC_004741.1	762720	763481	R	residues 1 to 253 of 253 are 100.00 pct identical to residues 1 to 253 of 253 from Escherichia coli K-12 : B0790; hypothetical protein	complement(762720..763481)	Shigella flexneri 2a str. 2457T	1077199
NP_836447.1	CDS	ybhQ	NC_004741.1	763614	764024	D	residues 1 to 136 of 136 are 83.08 pct identical to residues 1 to 136 of 136 from Escherichia coli K-12 : B0791; hypothetical protein	763614..764024	Shigella flexneri 2a str. 2457T	1077201
NP_836448.1	CDS	ybhR	NC_004741.1	763986	765092	R	residues 1 to 368 of 368 are 96.73 pct identical to residues 1 to 368 of 368 from Escherichia coli K-12 : B0792; hypothetical protein	complement(763986..765092)	Shigella flexneri 2a str. 2457T	1077202
NP_836449.1	CDS	ybhS	NC_004741.1	765103	766236	R	residues 1 to 377 of 377 are 92.83 pct identical to residues 1 to 377 of 377 from Escherichia coli K-12 : B0793; hypothetical protein	complement(765103..766236)	Shigella flexneri 2a str. 2457T	1077191
NP_836450.1	CDS	ybhF	NC_004741.1	766229	767980	R	residues 1 to 583 of 583 are 99.82 pct identical to residues 1 to 583 of 583 from Escherichia coli K-12 : B0794; ATP-binding component of a transport system	complement(766229..767980)	Shigella flexneri 2a str. 2457T	1077203
NP_836451.1	CDS	S0786	NC_004741.1	767958	768956	R	residues 1 to 332 of 332 are 82.53 pct identical to residues 1 to 332 of 332 from Escherichia coli K-12 : B0795; hypothetical protein	complement(767958..768956)	Shigella flexneri 2a str. 2457T	1077204
NP_836452.1	CDS	ybiH	NC_004741.1	768956	769639	R	residues 1 to 227 of 227 are 88.98 pct identical to residues 1 to 227 of 227 from Escherichia coli K-12 : B0796; DNA-binding transcriptional regulator	complement(768956..769639)	Shigella flexneri 2a str. 2457T	1077205
NP_836453.1	CDS	rhlE	NC_004741.1	769856	771076	D	this helicase is not essential cell growth; ATP-dependent RNA helicase RhlE	769856..771076	Shigella flexneri 2a str. 2457T	1077206
NP_836454.1	CDS	ybiA	NC_004741.1	771250	771732	R	residues 1 to 160 of 160 are 96.87 pct identical to residues 1 to 160 of 160 from Escherichia coli K-12 : B0798; hypothetical protein	complement(771250..771732)	Shigella flexneri 2a str. 2457T	1077207
NP_836455.1	CDS	dinG	NC_004741.1	771852	774002	D	helicase involved in DNA repair and perhaps also replication; ATP-dependent DNA helicase DinG	771852..774002	Shigella flexneri 2a str. 2457T	1077208
NP_836456.1	CDS	ybiB	NC_004741.1	774030	774992	D	residues 1 to 320 of 320 are 98.43 pct identical to residues 1 to 320 of 320 from Escherichia coli K-12 : B0800; glycosyl transferase family protein	774030..774992	Shigella flexneri 2a str. 2457T	1077209
NP_836457.1	CDS	ybiC	NC_004741.1	775133	776218	D	residues 1 to 361 of 361 are 98.89 pct identical to residues 1 to 361 of 361 from Escherichia coli K-12 : B0801; hypothetical protein	775133..776218	Shigella flexneri 2a str. 2457T	1077210
NP_836458.1	CDS	ybiJ	NC_004741.1	776447	776707	R	residues 1 to 86 of 86 are 84.88 pct identical to residues 1 to 86 of 86 from Escherichia coli K-12 : B0802; hypothetical protein	complement(776447..776707)	Shigella flexneri 2a str. 2457T	1077211
NP_836459.1	CDS	ybiI	NC_004741.1	776972	777238	R	residues 1 to 88 of 88 are 96.59 pct identical to residues 1 to 88 of 88 from Escherichia coli K-12 : B0803; hypothetical protein	complement(776972..777238)	Shigella flexneri 2a str. 2457T	1077212
NP_836460.2	CDS	ybiX	NC_004741.1	777312	777989	R	residues 1 to 237 of 237 are 93.24 pct identical to residues 1 to 237 of 237 from Escherichia coli K-12 : B0804; hydroxylase	complement(777312..777989)	Shigella flexneri 2a str. 2457T	1077213
NP_836461.1	CDS	S0797	NC_004741.1	780105	781433	D	residues 1 to 442 of 442 are 99.54 pct identical to residues 7 to 448 of 448 from GenPept : >gb|AAK18333.1|AF348706_22 (AF348706) IS4 orf [Shigella flexneri]; IS4 orf	780105..781433	Shigella flexneri 2a str. 2457T	1077214
NP_836462.1	CDS	ybiM	NC_004741.1	782016	782420	R	residues 1 to 134 of 134 are 98.50 pct identical to residues 1 to 134 of 134 from Escherichia coli K-12 : B0806; hypothetical protein	complement(782016..782420)	Shigella flexneri 2a str. 2457T	1077215
NP_836463.1	CDS	ybiN	NC_004741.1	782471	783478	D	residues 2 to 336 of 336 are 90.74 pct identical to residues 1 to 335 of 335 from Escherichia coli K-12 : B0807; SAM-dependent methyltransferase	782471..783478	Shigella flexneri 2a str. 2457T	1077216
NP_836464.1	CDS	glnQ	NC_004741.1	785960	786682	R	similar to ATP-binding component of ABC transporters; glutamine ABC transporter ATP-binding protein	complement(785960..786682)	Shigella flexneri 2a str. 2457T	1077218
NP_836465.1	CDS	glnP	NC_004741.1	786679	787338	R	similar to permease component of ABC transporters; mutations impair ability of Escherichia coli to transport and utilize glutamine; glutamine ABC transporter permease	complement(786679..787338)	Shigella flexneri 2a str. 2457T	1077219
NP_836466.1	CDS	glnH	NC_004741.1	787477	788223	R	similar to periplasmic-binding component of ABC transporters; glutamine ABC transporter periplasmic protein	complement(787477..788223)	Shigella flexneri 2a str. 2457T	1077220
NP_836467.1	CDS	dps	NC_004741.1	788627	789130	R	binds DNA in a non-sequence-specific manner and is abundant during stationary phase; forms a DNA-protein crystal that protects DNA from damage; required for normal starvation response and long-term stationary viability; forms a homododecameric complex and sequesters iron which provides protection against oxidative damage; DNA starvation/stationary phase protection protein Dps	complement(788627..789130)	Shigella flexneri 2a str. 2457T	1077186
NP_836468.1	CDS	ybiF	NC_004741.1	789429	790316	R	residues 1 to 295 of 295 are 91.52 pct identical to residues 1 to 295 of 295 from Escherichia coli K-12 : B0813; threonine and homoserine efflux system	complement(789429..790316)	Shigella flexneri 2a str. 2457T	1077200
NP_836469.1	CDS	ompX	NC_004741.1	790669	791184	D	OmpX; involved in cell adhesion; forms an eight-stranded antiparallel beta-barrel that protrudes from the cell surface; mutations in the gene increase cell-surface contact in fimbriated strains but decrease contact in nonfimbriated strains; outer membrane protein X	790669..791184	Shigella flexneri 2a str. 2457T	1077222
NP_836470.1	CDS	ybiP	NC_004741.1	791232	792815	R	residues 1 to 527 of 527 are 97.72 pct identical to residues 1 to 527 of 527 from Escherichia coli K-12 : B0815; enzyme	complement(791232..792815)	Shigella flexneri 2a str. 2457T	1077223
NP_836471.1	CDS	S0810	NC_004741.1	793401	793868	D	Transcriptional regulator that represses the manganese transporter MntH when manganese is present; manganese transport regulator MntR	793401..793868	Shigella flexneri 2a str. 2457T	1077225
NP_836472.1	CDS	ybiR	NC_004741.1	793865	794983	D	residues 1 to 371 of 372 are 87.60 pct identical to residues 1 to 371 of 372 from Escherichia coli K-12 : B0818; hypothetical protein	793865..794983	Shigella flexneri 2a str. 2457T	1077227
NP_836473.1	CDS	ybiS	NC_004741.1	795042	795962	R	residues 1 to 306 of 306 are 99.67 pct identical to residues 1 to 306 of 306 from Escherichia coli K-12 : B0819; hypothetical protein	complement(795042..795962)	Shigella flexneri 2a str. 2457T	1077228
NP_836474.1	CDS	ybiT	NC_004741.1	796181	797773	D	residues 1 to 530 of 530 are 99.81 pct identical to residues 1 to 530 of 530 from Escherichia coli K-12 : B0820; ATP-binding component of a transport system	796181..797773	Shigella flexneri 2a str. 2457T	1077243
NP_836475.1	CDS	ybiU	NC_004741.1	798014	799279	R	residues 1 to 421 of 421 are 99.04 pct identical to residues 1 to 421 of 421 from Escherichia coli K-12 : B0821; hypothetical protein	complement(798014..799279)	Shigella flexneri 2a str. 2457T	1077229
NP_836476.1	CDS	S0815	NC_004741.1	799431	800246	R	residues 1 to 271 of 271 are 99.63 pct identical to residues 1 to 271 of 271 from Escherichia coli K-12 : B0822; hypothetical protein	complement(799431..800246)	Shigella flexneri 2a str. 2457T	1077230
NP_836477.1	CDS	ybiW	NC_004741.1	800392	802824	R	residues 1 to 810 of 810 are 93.20 pct identical to residues 1 to 810 of 810 from Escherichia coli K-12 : B0823; formate acetyltransferase	complement(800392..802824)	Shigella flexneri 2a str. 2457T	1077231
NP_836478.1	CDS	ybiY	NC_004741.1	802830	803756	R	residues 1 to 308 of 308 are 94.48 pct identical to residues 1 to 308 of 308 from Escherichia coli K-12 : B0824; pyruvate formate-lyase 2 activating enzyme	complement(802830..803756)	Shigella flexneri 2a str. 2457T	1077232
NP_836479.2	CDS	mipB	NC_004741.1	803860	804522	D	similar to transaldolase from Escherichia coli; many organisms have multiple copies; fructose-6-phosphate aldolase	803860..804522	Shigella flexneri 2a str. 2457T	1077233
NP_836480.1	CDS	moeB	NC_004741.1	804701	805450	R	ATP-dependent adenylate transferase, transfers adenyl moiety to the MoeD subunit of molybdopterin synthase; molybdopterin biosynthesis protein MoeB	complement(804701..805450)	Shigella flexneri 2a str. 2457T	1077234
NP_836481.1	CDS	moeA	NC_004741.1	805450	806685	R	is involved in the formation of active molybdenum cofactor and the chelation of molybdenum; molybdopterin biosynthesis protein MoeA	complement(805450..806685)	Shigella flexneri 2a str. 2457T	1077236
NP_836482.1	CDS	ybiK	NC_004741.1	806889	807854	D	residues 1 to 321 of 321 are 95.95 pct identical to residues 1 to 321 of 321 from Escherichia coli K-12 : B0828; L-asparaginase	806889..807854	Shigella flexneri 2a str. 2457T	1077237
NP_836483.1	CDS	S0822	NC_004741.1	807874	809712	D	with GsiBCD is involved in glutathione import; GsiA contains 2 ATP-binding domains; glutathione transporter ATP-binding protein	807874..809712	Shigella flexneri 2a str. 2457T	1077238
NP_836484.1	CDS	S0823	NC_004741.1	809732	811270	D	residues 1 to 512 of 512 are 99.41 pct identical to residues 1 to 512 of 512 from Escherichia coli K-12 : B0830; transporter	809732..811270	Shigella flexneri 2a str. 2457T	1077239
NP_836485.1	CDS	S0824	NC_004741.1	811288	812208	D	residues 1 to 306 of 306 are 87.58 pct identical to residues 1 to 306 of 306 from Escherichia coli K-12 : B0831; transport system permease	811288..812208	Shigella flexneri 2a str. 2457T	1077240
NP_836486.1	CDS	S0825	NC_004741.1	812211	813122	D	residues 1 to 303 of 303 are 95.04 pct identical to residues 1 to 303 of 303 from Escherichia coli K-12 : B0832; transport system permease	812211..813122	Shigella flexneri 2a str. 2457T	1077241
NP_836487.1	CDS	S0827	NC_004741.1	815650	816978	D	residues 1 to 442 of 442 are 99.32 pct identical to residues 1 to 442 of 442 from Escherichia coli K-12 : B0834; hypothetical protein	815650..816978	Shigella flexneri 2a str. 2457T	1077244
NP_836488.1	CDS	yliG	NC_004741.1	817025	818350	R	residues 1 to 441 of 441 are 96.82 pct identical to residues 1 to 441 of 441 from Escherichia coli K-12 : B0835; hypothetical protein	complement(817025..818350)	Shigella flexneri 2a str. 2457T	1077246
NP_836489.1	CDS	bssR	NC_004741.1	818563	818946	D	BssS; regulator of biofilm through signal secretion; disruption of this gene in Escherichia coli led to effects on biofilm formation, alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2 uptake and processing; biofilm formation regulatory protein BssR	818563..818946	Shigella flexneri 2a str. 2457T	1077005
NP_836490.1	CDS	yliJ	NC_004741.1	820168	820800	R	residues 1 to 210 of 210 are 89.99 pct identical to residues 1 to 210 of 210 from Escherichia coli K-12 : B0838; transferase	complement(820168..820800)	Shigella flexneri 2a str. 2457T	1077248
NP_836491.1	CDS	S0833	NC_004741.1	822062	822364	D	residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAL72452.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS600 orfA	822062..822364	Shigella flexneri 2a str. 2457T	1077250
NP_836492.1	CDS	S0834	NC_004741.1	822505	823218	D	residues 1 to 237 of 237 are 90.71 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAL72453.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS600 orfB	822505..823218	Shigella flexneri 2a str. 2457T	1077251
NP_836493.1	CDS	deoR	NC_004741.1	823555	824313	R	residues 1 to 252 of 252 are 94.84 pct identical to residues 1 to 252 of 252 from Escherichia coli K-12 : B0840; DNA-binding transcriptional repressor DeoR	complement(823555..824313)	Shigella flexneri 2a str. 2457T	1077252
NP_836494.1	CDS	ybjG	NC_004741.1	824371	824967	R	residues 1 to 198 of 198 are 91.41 pct identical to residues 1 to 198 of 198 from Escherichia coli K-12 : B0841; undecaprenyl pyrophosphate phosphatase	complement(824371..824967)	Shigella flexneri 2a str. 2457T	1077253
NP_836495.1	CDS	cmr	NC_004741.1	825252	826478	D	residues 1 to 408 of 408 are 95.12 pct identical to residues 1 to 410 of 410 from Escherichia coli K-12 : B0842; proton motive force efflux pump; chloramphenicol resistance pump Cmr	825252..826478	Shigella flexneri 2a str. 2457T	1077254
NP_836496.1	CDS	ybjH	NC_004741.1	826519	826803	R	residues 1 to 94 of 94 are 57.44 pct identical to residues 1 to 94 of 94 from Escherichia coli K-12 : B0843; hypothetical protein	complement(826519..826803)	Shigella flexneri 2a str. 2457T	1077255
NP_836497.1	CDS	S0840	NC_004741.1	826889	827677	R	residues 1 to 262 of 262 are 98.85 pct identical to residues 1 to 262 of 262 from Escherichia coli K-12 : B0844; hypothetical protein	complement(826889..827677)	Shigella flexneri 2a str. 2457T	1077257
NP_836498.1	CDS	S0841	NC_004741.1	827704	828912	R	residues 1 to 402 of 402 are 85.82 pct identical to residues 1 to 402 of 402 from Escherichia coli K-12 : B0845; DEOR-type transcriptional regulator	complement(827704..828912)	Shigella flexneri 2a str. 2457T	1077258
NP_836499.1	CDS	S0842	NC_004741.1	828996	829532	D	residues 1 to 178 of 178 are 99.43 pct identical to residues 1 to 178 of 178 from Escherichia coli K-12 : B0846; DEOR-type transcriptional regulator	828996..829532	Shigella flexneri 2a str. 2457T	1077888
NP_836500.1	CDS	S0843	NC_004741.1	829707	831392	R	residues 1 to 561 of 561 are 93.76 pct identical to residues 1 to 561 of 561 from Escherichia coli K-12 : B0847; hypothetical protein	complement(829707..831392)	Shigella flexneri 2a str. 2457T	1077259
NP_836501.1	CDS	ybjM	NC_004741.1	831662	832039	D	residues 1 to 125 of 125 are 100.00 pct identical to residues 1 to 125 of 125 from Escherichia coli K-12 : B0848; hypothetical protein	831662..832039	Shigella flexneri 2a str. 2457T	1077626
NP_836502.1	CDS	grxA	NC_004741.1	832069	832326	R	functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase; also involved in reducing some disulfides in a coupled system with glutathione reductase; glutaredoxin	complement(832069..832326)	Shigella flexneri 2a str. 2457T	1077260
NP_836503.1	CDS	ybjC	NC_004741.1	832486	832773	D	YbjC; located in the same operon as the nfsA gene; member of the soxRS regulon which mediates in part the increased levels of superoxide in response to oxidative stress; induced by paraquat; regulated by SoxS; unknown function; hypothetical protein	832486..832773	Shigella flexneri 2a str. 2457T	1077261
NP_836504.1	CDS	mdaA	NC_004741.1	832757	833479	D	NADPH-dependent; oxygen-insensitive; catalyzes the reduction of nitroaromatic compounds; nitroreductase A	832757..833479	Shigella flexneri 2a str. 2457T	1077262
NP_836505.1	CDS	rimK	NC_004741.1	833540	834442	D	responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6; ribosomal protein S6 modification protein	833540..834442	Shigella flexneri 2a str. 2457T	1077263
NP_836506.1	CDS	ybjN	NC_004741.1	834530	835006	D	residues 1 to 158 of 158 are 100.00 pct identical to residues 1 to 158 of 158 from Escherichia coli K-12 : B0853; sensory transduction regulator	834530..835006	Shigella flexneri 2a str. 2457T	1077264
NP_836507.1	CDS	potF	NC_004741.1	835358	836470	D	residues 1 to 370 of 370 are 99.72 pct identical to residues 1 to 370 of 370 from Escherichia coli K-12 : B0854; putrescine transporter subunit: periplasmic-binding component of ABC superfamily	835358..836470	Shigella flexneri 2a str. 2457T	1077265
NP_836508.2	CDS	potG	NC_004741.1	836565	837698	D	part of the PotFGHI ATP-dependent putrescine transporter; putrescine transporter ATP-binding subunit	836565..837698	Shigella flexneri 2a str. 2457T	1077266
NP_836509.1	CDS	potH	NC_004741.1	837708	838661	D	residues 1 to 317 of 317 are 89.90 pct identical to residues 1 to 317 of 317 from Escherichia coli K-12 : B0856; putrescine transporter subunit: membrane component of ABC superfamily	837708..838661	Shigella flexneri 2a str. 2457T	1077267
NP_836510.1	CDS	potI	NC_004741.1	838658	839503	D	residues 1 to 281 of 281 are 86.47 pct identical to residues 1 to 281 of 281 from Escherichia coli K-12 : B0857; putrescine transporter subunit: membrane component of ABC superfamily	838658..839503	Shigella flexneri 2a str. 2457T	1077268
NP_836511.1	CDS	ybjO	NC_004741.1	839563	840051	D	residues 1 to 162 of 162 are 91.35 pct identical to residues 1 to 162 of 162 from Escherichia coli K-12 : B0858; hypothetical protein	839563..840051	Shigella flexneri 2a str. 2457T	1077269
NP_836512.1	CDS	rumB	NC_004741.1	840092	841219	D	RNA uridine methyltransferase B; catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA; 23S rRNA methyluridine methyltransferase	840092..841219	Shigella flexneri 2a str. 2457T	1080932
NP_836513.1	CDS	artJ	NC_004741.1	841394	842125	R	residues 1 to 243 of 243 are 92.18 pct identical to residues 1 to 243 of 243 from Escherichia coli K-12 : B0860; arginine 3rd transport system periplasmic binding protein	complement(841394..842125)	Shigella flexneri 2a str. 2457T	1077270
NP_836514.1	CDS	artM	NC_004741.1	842417	843085	R	with ArtPQJI acts to transport arginine across the inner membrane; arginine transporter permease subunit ArtM	complement(842417..843085)	Shigella flexneri 2a str. 2457T	1077271
NP_836515.1	CDS	artQ	NC_004741.1	843085	843801	R	with ArtPMJI transports arginine across the inner membrane; arginine transporter permease subunit ArtQ	complement(843085..843801)	Shigella flexneri 2a str. 2457T	1077272
NP_836516.1	CDS	artI	NC_004741.1	843808	844539	R	residues 1 to 243 of 243 are 99.17 pct identical to residues 1 to 243 of 243 from Escherichia coli K-12 : B0863; arginine 3rd transport system periplasmic binding protein	complement(843808..844539)	Shigella flexneri 2a str. 2457T	1077273
NP_836517.1	CDS	artP	NC_004741.1	844557	845285	R	With ArtMQJI transports arginine across the inner membrane; arginine transporter ATP-binding subunit	complement(844557..845285)	Shigella flexneri 2a str. 2457T	1077274
NP_836518.1	CDS	ybjP	NC_004741.1	845503	846018	R	induced during stationary phase and by acivicin (a glutamine analog); regulated by Lrp and RpoS; lipoprotein	complement(845503..846018)	Shigella flexneri 2a str. 2457T	1077275
NP_836519.1	CDS	S4813	NC_004741.1	846032	846214	R	residues 1 to 61 of 61 are 100.00 pct identical to residues 1 to 61 of 61 from NP_286635.1, Z1096 gene product Escherichia coli O157:H7 EDL933; hypothetical protein	complement(846032..846214)	Shigella flexneri 2a str. 2457T	1077276
NP_836520.1	CDS	S4814	NC_004741.1	846667	848436	D	residues 1 to 402 of 589 are 94.52 pct identical to residues 12 to 412 of 413 from NP_286636.1 Z1097 gene product Escherichia coli O157:H7 EDL933, NP_308976.1 hypothetical protein Escherichia coli O157:H7; E90747 hypothetical protein ECs0949 Escherichia coli (strain O157:H7, substrain RIMD 0509952), B85598 hypothetical protein Z1097; hypothetical protein	846667..848436	Shigella flexneri 2a str. 2457T	1077277
NP_836521.1	CDS	S0862	NC_004741.1	848646	848969	D	residues 1 to 107 of 107 are 99.06 pct identical to residues 1 to 107 of 107 from Escherichia coli K-12 : B0866; hypothetical protein	848646..848969	Shigella flexneri 2a str. 2457T	1077278
NP_836522.1	CDS	S0863	NC_004741.1	848966	849796	D	residues 1 to 276 of 276 are 94.92 pct identical to residues 1 to 276 of 276 from Escherichia coli K-12 : B0867; regulator	848966..849796	Shigella flexneri 2a str. 2457T	1077279
NP_836523.1	CDS	S0864	NC_004741.1	849793	850842	R	residues 1 to 349 of 349 are 98.56 pct identical to residues 1 to 349 of 349 from Escherichia coli K-12 : B0868; nucleotide di-P-sugar epimerase or dehydratase	complement(849793..850842)	Shigella flexneri 2a str. 2457T	1077280
NP_836524.1	CDS	ybjT	NC_004741.1	850905	852335	R	residues 1 to 476 of 476 are 96.00 pct identical to residues 11 to 486 of 486 from Escherichia coli K-12 : B0869; dTDP-glucose enzyme	complement(850905..852335)	Shigella flexneri 2a str. 2457T	1077281
NP_836525.1	CDS	ybjU	NC_004741.1	852346	853347	R	low- specificity; catalyzes the formation of acetaldehyde and glycine from L-threonine; acts on L-threonine, L-allo-threonine, L-threo-phenylserine, and L-erythro-phenylserine; L-threonine aldolase	complement(852346..853347)	Shigella flexneri 2a str. 2457T	1077282
NP_836526.1	CDS	poxB	NC_004741.1	853384	855102	R	catalyzes the formation of acetate from pyruvate; pyruvate dehydrogenase	complement(853384..855102)	Shigella flexneri 2a str. 2457T	1077283
NP_836527.1	CDS	S0868	NC_004741.1	855235	856203	R	residues 1 to 322 of 322 are 94.40 pct identical to residues 1 to 322 of 322 from Escherichia coli K-12 : B0872; HCP oxidoreductase, NADH-dependent	complement(855235..856203)	Shigella flexneri 2a str. 2457T	1077284
NP_836528.2	CDS	ybjW	NC_004741.1	856215	857867	R	catalyzes the reduction of hydroxylamine to ammonia and water; hydroxylamine reductase	complement(856215..857867)	Shigella flexneri 2a str. 2457T	1077285
NP_836529.1	CDS	ybjE	NC_004741.1	858011	858958	R	residues 1 to 315 of 315 are 87.61 pct identical to residues 1 to 315 of 315 from Escherichia coli K-12 : B0874; surface protein	complement(858011..858958)	Shigella flexneri 2a str. 2457T	1077286
NP_836530.2	CDS	S0871	NC_004741.1	859034	859939	R	IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats; insertion element IS2 transposase InsD	complement(859034..859939)	Shigella flexneri 2a str. 2457T	1077287
NP_836531.2	CDS	S0872	NC_004741.1	859897	860262	R	IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats; insertion sequence 2 OrfA protein	complement(859897..860262)	Shigella flexneri 2a str. 2457T	1077288
NP_836532.1	CDS	aqpZ	NC_004741.1	860703	861398	R	porin involved in osmoregulation allowing water to move into and out of the cell in response to osmotic pressure; aquaporin Z	complement(860703..861398)	Shigella flexneri 2a str. 2457T	1077289
NP_836533.1	CDS	S0874	NC_004741.1	861450	861953	R	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri]; IS1 orfB	complement(861450..861953)	Shigella flexneri 2a str. 2457T	1077290
NP_836534.1	CDS	S0875	NC_004741.1	861872	862147	R	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(861872..862147)	Shigella flexneri 2a str. 2457T	1077291
NP_836535.1	CDS	ybjD	NC_004741.1	862599	864257	D	residues 1 to 552 of 552 are 97.10 pct identical to residues 1 to 552 of 552 from Escherichia coli K-12 : B0876; hypothetical protein	862599..864257	Shigella flexneri 2a str. 2457T	1077292
NP_836536.1	CDS	ybjX	NC_004741.1	864254	865246	R	residues 1 to 330 of 330 are 95.75 pct identical to residues 1 to 330 of 330 from Escherichia coli K-12 : B0877; enzyme	complement(864254..865246)	Shigella flexneri 2a str. 2457T	1080446
NP_836537.1	CDS	S0878	NC_004741.1	865361	866476	D	confers macrolide resistance via active drug efflux; macrolide transporter subunit MacA	865361..866476	Shigella flexneri 2a str. 2457T	1077293
NP_836538.1	CDS	ybjZ	NC_004741.1	866473	868419	D	with MacA is involved in the export of macrolide; macrolide transporter ATP-binding /permease	866473..868419	Shigella flexneri 2a str. 2457T	1077294
NP_836539.1	CDS	cspD	NC_004741.1	868492	868716	R	inhibits DNA replication at both initiation and elongation steps; stationary phase and starvation inducible; stationary phase/starvation inducible regulatory protein CspD	complement(868492..868716)	Shigella flexneri 2a str. 2457T	1077295
NP_836540.1	CDS	clpS	NC_004741.1	869039	869359	D	involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA; ATP-dependent Clp protease adaptor protein ClpS	869039..869359	Shigella flexneri 2a str. 2457T	1077296
NP_836541.1	CDS	clpA	NC_004741.1	869390	871666	D	ATPase and specificity subunit of the ClpA-ClpP ATP dependent serine protease; directs protease to specific substrates; ATP-dependent Clp protease ATP-binding subunit	869390..871666	Shigella flexneri 2a str. 2457T	1077297
NP_836542.1	CDS	infA	NC_004741.1	872410	872628	R	stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1	complement(872410..872628)	Shigella flexneri 2a str. 2457T	1077299
NP_836543.1	CDS	aat	NC_004741.1	872913	873617	R	leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase	complement(872913..873617)	Shigella flexneri 2a str. 2457T	1077300
NP_836544.1	CDS	cydC	NC_004741.1	873659	875380	R	in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; cysteine/glutathione ABC transporter membrane/ATP-binding component	complement(873659..875380)	Shigella flexneri 2a str. 2457T	1080456
NP_836545.1	CDS	cydD	NC_004741.1	875381	877147	R	in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; cysteine/glutathione ABC transporter membrane/ATP-binding component	complement(875381..877147)	Shigella flexneri 2a str. 2457T	1077301
NP_836546.1	CDS	trxB	NC_004741.1	877270	878235	R	catalyzes the transfer of electrons from NADPH to thioredoxin; FAD/NAD(P) binding; thioredoxin reductase	complement(877270..878235)	Shigella flexneri 2a str. 2457T	1077302
NP_836547.1	CDS	lrp	NC_004741.1	878779	879273	D	mediates a global response to leucine; acts as a regulator for several genes involved in the high-affinity branched-chain amino acid transport system; leucine-responsive transcriptional regulator	878779..879273	Shigella flexneri 2a str. 2457T	1077303
NP_836548.1	CDS	ftsK	NC_004741.1	879408	883436	D	DNA-binding membrane protein required for chromosome resolution and partitioning; DNA translocase FtsK	879408..883436	Shigella flexneri 2a str. 2457T	1077304
NP_836549.1	CDS	lolA	NC_004741.1	883588	884202	D	participates with LolB in the incorporation of lipoprotein into the outer membrane; outer-membrane lipoprotein carrier protein	883588..884202	Shigella flexneri 2a str. 2457T	1077306
NP_836550.1	CDS	ycaJ	NC_004741.1	884213	885556	D	residues 1 to 447 of 447 are 99.55 pct identical to residues 1 to 447 of 447 from Escherichia coli K-12 : B0892; recombination factor protein RarA	884213..885556	Shigella flexneri 2a str. 2457T	1077307
NP_836551.1	CDS	serS	NC_004741.1	885647	886939	D	catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase	885647..886939	Shigella flexneri 2a str. 2457T	1077308
NP_836552.1	CDS	dmsA	NC_004741.1	887266	889623	D	residues 1 to 785 of 785 are 98.47 pct identical to residues 1 to 785 of 785 from Escherichia coli K-12 : B0894; anaerobic dimethyl sulfoxide reductase subunit A	887266..889623	Shigella flexneri 2a str. 2457T	1076457
NP_836553.1	CDS	dmsB	NC_004741.1	889634	890251	D	residues 1 to 205 of 205 are 100.00 pct identical to residues 1 to 205 of 205 from Escherichia coli K-12 : B0895; anaerobic dimethyl sulfoxide reductase subunit B	889634..890251	Shigella flexneri 2a str. 2457T	1077309
NP_836554.1	CDS	dmsC	NC_004741.1	890253	891044	D	residues 1 to 263 of 263 are 85.01 pct identical to residues 1 to 287 of 287 from Escherichia coli K-12 : B0896; anaerobic dimethyl sulfoxide reductase subunit C	890253..891044	Shigella flexneri 2a str. 2457T	1077310
NP_836555.1	CDS	ycaC	NC_004741.1	891080	891706	R	residues 1 to 208 of 208 are 98.55 pct identical to residues 1 to 208 of 208 from Escherichia coli K-12 : B0897; hypothetical protein	complement(891080..891706)	Shigella flexneri 2a str. 2457T	1077311
NP_836556.1	CDS	ycaD	NC_004741.1	892021	893169	D	residues 1 to 382 of 382 are 90.31 pct identical to residues 1 to 382 of 382 from Escherichia coli K-12 : B0898; MFS family transporter protein	892021..893169	Shigella flexneri 2a str. 2457T	1076630
NP_836557.1	CDS	S0899	NC_004741.1	893482	894156	D	residues 1 to 224 of 224 are 99.10 pct identical to residues 1 to 224 of 224 from GenPept : >gb|AAL72464.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; ISSfl3 orfA	893482..894156	Shigella flexneri 2a str. 2457T	1077312
NP_836558.1	CDS	S0900	NC_004741.1	894153	894503	D	residues 1 to 116 of 116 are 100.00 pct identical to residues 1 to 116 of 116 from GenPept : >gb|AAK18528.1|AF348706_217 (AF348706)  IS orf [Shigella flexneri]; partial; ISSfl3 orfB	894153..894503	Shigella flexneri 2a str. 2457T	1077313
NP_836559.1	CDS	S0901	NC_004741.1	894500	896101	D	residues 1 to 533 of 533 are 97.37 pct identical to residues 1 to 533 of 533 from GenPept : >gb|AAL72376.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; ISSfl3 orfC,D	894500..896101	Shigella flexneri 2a str. 2457T	1077314
NP_836560.1	CDS	S0905	NC_004741.1	897507	897809	R	residues 1 to 100 of 100 are 100.00 pct identical to residues 13 to 112 of 112 from GenPept : >gb|AAL72382.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS911 orfA	complement(897507..897809)	Shigella flexneri 2a str. 2457T	1077315
NP_836561.1	CDS	S0906	NC_004741.1	897790	897996	R	residues 1 to 38 of 68 are 100.00 pct identical to residues 41 to 78 of 172 from GenPept : >gb|AAG56426.1|AE005369_15 (AE005369) unknown protein encoded within prophage CP-933R [Escherichia coli O157:H7 EDL933]; bacteriophage protein	complement(897790..897996)	Shigella flexneri 2a str. 2457T	1077372
NP_836562.1	CDS	S0907	NC_004741.1	897993	898283	R	residues 1 to 96 of 96 are 96.87 pct identical to residues 1 to 96 of 96 from GenPept : >emb|CAD05594.1| (AL627272)  bacteriophage protein [Salmonella enterica subsp. enterica serovar Typhi]; bacteriophage protein	complement(897993..898283)	Shigella flexneri 2a str. 2457T	1077316
NP_836563.1	CDS	S0908	NC_004741.1	898283	898414	R	residues 1 to 43 of 43 are 97.67 pct identical to residues 157 to 199 of 199 from GenPept : >emb|CAD05595.1| (AL627272) hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi]; hypothetical protein	complement(898283..898414)	Shigella flexneri 2a str. 2457T	1077317
NP_836564.1	CDS	S0909	NC_004741.1	898581	898883	D	residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAL72452.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS600 orfA	898581..898883	Shigella flexneri 2a str. 2457T	1077318
NP_836565.1	CDS	S0910	NC_004741.1	899024	899737	D	residues 1 to 237 of 237 are 90.71 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAL72453.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS600 orfB	899024..899737	Shigella flexneri 2a str. 2457T	1077319
NP_836566.1	CDS	S0911	NC_004741.1	899777	900148	R	residues 1 to 123 of 123 are 97.56 pct identical to residues 1 to 123 of 199 from GenPept : >gb|AAG56427.1|AE005369_16 (AE005369) unknown protein encoded within prophage CP-933R [Escherichia coli O157:H7 EDL933]; hypothetical protein	complement(899777..900148)	Shigella flexneri 2a str. 2457T	1077320
NP_836567.1	CDS	S0912	NC_004741.1	900724	900822	R	residues 1 to 32 of 32 are 93.75 pct identical to residues 39 to 70 of 70 from GenPept : >emb|CAD05598.1| (AL627272) host cell-killing modulation protein [Salmonella enterica subsp. enterica serovar Typhi]; host cell-killing modulation protein	complement(900724..900822)	Shigella flexneri 2a str. 2457T	1077321
NP_836568.1	CDS	S0913	NC_004741.1	901106	901672	R	residues 1 to 183 of 188 are 81.42 pct identical to residues 33 to 215 of 236 from GenPept : >gb|AAF85072.1|AE004039_7 (AE004039) conserved hypothetical protein [Xylella fastidiosa 9a5c]; hypothetical protein	complement(901106..901672)	Shigella flexneri 2a str. 2457T	1077322
NP_836569.1	CDS	S0914	NC_004741.1	902354	902776	R	residues 1 to 140 of 140 are 69.99 pct identical to residues 1 to 140 of 140 from GenPept : >gb|AAG56435.1|AE005370_8 (AE005370) unknown protein encoded within prophage CP-933R [Escherichia coli O157:H7 EDL933]; bacteriophage protein	complement(902354..902776)	Shigella flexneri 2a str. 2457T	1077323
NP_836570.1	CDS	S0917	NC_004741.1	903683	904321	R	residues 1 to 201 of 212 are 97.01 pct identical to residues 1 to 201 of 262 from GenPept : >emb|CAD05607.1| (AL627272) conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi]; bacteriophage protein	complement(903683..904321)	Shigella flexneri 2a str. 2457T	1077325
NP_836571.1	CDS	S0918	NC_004741.1	904399	904821	R	residues 1 to 127 of 140 are 88.97 pct identical to residues 1 to 127 of 140 from GenPept : >emb|CAD05608.1| (AL627272) conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi]; bacteriophage protein	complement(904399..904821)	Shigella flexneri 2a str. 2457T	1077326
NP_836572.1	CDS	S0919	NC_004741.1	904805	905032	R	residues 1 to 73 of 75 are 90.41 pct identical to residues 1 to 73 of 75 from GenPept : >gb|AAG56121.1|AE005343_11 (AE005343)  regulator of cell division encoded by prophage CP-933O [Escherichia coli O157:H7 EDL933]; DNA-binding transcriptional regulator DicC	complement(904805..905032)	Shigella flexneri 2a str. 2457T	1077327
NP_836573.1	CDS	S0920	NC_004741.1	905720	905875	D	residues 1 to 51 of 51 are 92.15 pct identical to residues 1 to 51 of 51 from GenPept : >emb|CAD05611.1| (AL627272) conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi]; hypothetical protein	905720..905875	Shigella flexneri 2a str. 2457T	1080797
NP_836574.1	CDS	S0921	NC_004741.1	905877	906080	D	residues 1 to 67 of 67 are 97.01 pct identical to residues 1 to 67 of 67 from GenPept : >emb|CAD05612.1| (AL627272) conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi]; hypothetical protein	905877..906080	Shigella flexneri 2a str. 2457T	1080953
NP_836575.2	CDS	S0922	NC_004741.1	906322	907227	R	IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats; insertion element IS2 transposase InsD	complement(906322..907227)	Shigella flexneri 2a str. 2457T	1077328
NP_836576.2	CDS	S0923	NC_004741.1	907185	907550	R	IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats; insertion sequence 2 OrfA protein	complement(907185..907550)	Shigella flexneri 2a str. 2457T	1080078
NP_836577.1	CDS	S0924	NC_004741.1	908098	908637	D	residues 1 to 179 of 179 are 85.47 pct identical to residues 1 to 179 of 179 from GenPept : >emb|CAA80648.1| (Z23101) Sequence similarity to P4 ORF199 suggests ORF179 expression [Shigella flexneri]; bacteriophage protein	908098..908637	Shigella flexneri 2a str. 2457T	1077329
NP_836578.1	CDS	S0925	NC_004741.1	908598	908945	D	no significant similarities; hypothetical protein	908598..908945	Shigella flexneri 2a str. 2457T	1077330
NP_836579.1	CDS	S0927	NC_004741.1	909459	909761	D	residues 1 to 100 of 100 are 99.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAL72452.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS600 orfA	909459..909761	Shigella flexneri 2a str. 2457T	1077331
NP_836580.1	CDS	S0928	NC_004741.1	909902	910615	D	residues 1 to 237 of 237 are 91.13 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAL72453.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS600 orfB	909902..910615	Shigella flexneri 2a str. 2457T	1077332
NP_836581.1	CDS	S0929	NC_004741.1	910640	911284	R	residues 1 to 182 of 214 are 59.89 pct identical to residues 1 to 178 of 866 from GenPept : >gb|AAG56447.1|AE005371_3 (AE005371)  exodeoxyribonuclease VIII of prophage CP-933R [Escherichia coli O157:H7 EDL933]; exodeoxyribonuclease VIII of prophage CP-933R	complement(910640..911284)	Shigella flexneri 2a str. 2457T	1077333
NP_836582.1	CDS	S0930	NC_004741.1	911628	912068	R	residues 1 to 146 of 146 are 100.00 pct identical to residues 1 to 146 of 146 from GenPept : >gb|AAL72524.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; partial; IS600 orfB	complement(911628..912068)	Shigella flexneri 2a str. 2457T	1077334
NP_836583.1	CDS	S0931	NC_004741.1	912483	912785	R	residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAL72452.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS600 orfA	complement(912483..912785)	Shigella flexneri 2a str. 2457T	1077335
NP_836584.1	CDS	S0932	NC_004741.1	912851	913468	D	residues 19 to 205 of 205 are 71.12 pct identical to residues 2 to 188 of 188 from GenPept : >emb|CAC83575.1| (AJ298298) hypothetical protein [Bacteriophage P27]; hypothetical protein	912851..913468	Shigella flexneri 2a str. 2457T	1077336
NP_836585.1	CDS	ipaH_2	NC_004741.1	913648	915474	R	residues 1 to 608 of 608 are 63.71 pct identical to residues 1 to 565 of 565 from NRprotein_Feb03 : >ref|NP_085238.1| invasion plasmid antigen [Shigella flexneri] emb|CAC05787.1| IpaH7.8, member of the IpaH family, secreted by the Mxi-Spa secretion machinery, function unknown [Shigella flexneri]; invasion plasmid antigen	complement(913648..915474)	Shigella flexneri 2a str. 2457T	1077585
NP_836586.1	CDS	ybhE	NC_004741.1	916356	917351	D	catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate; 6-phosphogluconolactonase	916356..917351	Shigella flexneri 2a str. 2457T	1079910
NP_836587.1	CDS	ybhH	NC_004741.1	918634	919581	D	residues 1 to 315 of 315 are 99.68 pct identical to residues 36 to 350 of 350 from Escherichia coli K-12 : B0769; hypothetical protein	918634..919581	Shigella flexneri 2a str. 2457T	1077338
NP_836588.1	CDS	ybhI	NC_004741.1	919720	921090	D	residues 1 to 456 of 456 are 97.36 pct identical to residues 22 to 477 of 477 from Escherichia coli K-12 : B0770; membrane pump protein	919720..921090	Shigella flexneri 2a str. 2457T	1077339
NP_836589.1	CDS	ybhJ	NC_004741.1	921273	923453	D	residues 1 to 726 of 726 are 96.41 pct identical to residues 9 to 761 of 761 from Escherichia coli K-12 : B0771; enzyme	921273..923453	Shigella flexneri 2a str. 2457T	1077341
NP_836590.1	CDS	ybhC	NC_004741.1	923594	924877	R	outer membrane lipoprotein that catalyzes the hydrolysis of the thioester bond in palmitoyl-CoA; YbhC localizes to the cellular poles; member of pectinesterase family; pectinesterase	complement(923594..924877)	Shigella flexneri 2a str. 2457T	1077342
NP_836591.1	CDS	S0941	NC_004741.1	925012	925782	R	residues 1 to 256 of 256 are 100.00 pct identical to residues 32 to 287 of 287 from GenPept : >gb|AAG55102.1|AE005255_3 (AE005255)  integrase encoded by prophage CP-933K; [Escherichia coli O157:H7 EDL933]; integrase encoded by prophage CP-933K; partial	complement(925012..925782)	Shigella flexneri 2a str. 2457T	1077343
NP_836592.1	CDS	S0942	NC_004741.1	925994	926707	R	residues 1 to 237 of 237 are 90.71 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAL72453.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS600 orfB	complement(925994..926707)	Shigella flexneri 2a str. 2457T	1077344
NP_836593.1	CDS	S0943	NC_004741.1	926848	927150	R	residues 1 to 100 of 100 are 99.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAL72452.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS600 orfA	complement(926848..927150)	Shigella flexneri 2a str. 2457T	1077345
NP_836594.1	CDS	S0944	NC_004741.1	927343	927771	D	residues 1 to 101 of 142 are 78.21 pct identical to residues 1 to 101 of 165 from GenPept : >gb|AAG55116.1|AE005256_7 (AE005256)  lysozyme protein R of prophage CP-933K [Escherichia coli O157:H7 EDL933]; lysozyme protein R of prophage CP-933K	927343..927771	Shigella flexneri 2a str. 2457T	1077346
NP_836595.1	CDS	S0945	NC_004741.1	927896	928393	D	residues 1 to 165 of 165 are 98.18 pct identical to residues 60 to 224 of 224 from GenPept : >gb|AAL72464.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; ISSfl3 orfA	927896..928393	Shigella flexneri 2a str. 2457T	1077347
NP_836596.1	CDS	S0946	NC_004741.1	928390	928740	D	residues 1 to 116 of 116 are 100.00 pct identical to residues 1 to 116 of 116 from GenPept : >gb|AAK18528.1|AF348706_217 (AF348706)  IS orf [Shigella flexneri]; ISSfl3 orfB	928390..928740	Shigella flexneri 2a str. 2457T	1077348
NP_836597.1	CDS	S0947	NC_004741.1	928737	929279	D	residues 1 to 165 of 180 are 92.12 pct identical to residues 1 to 165 of 533 from GenPept : >gb|AAL72472.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; ISSfl3 orfC	928737..929279	Shigella flexneri 2a str. 2457T	1077349
NP_836598.1	CDS	S0948	NC_004741.1	929285	929611	D	residues 1 to 108 of 108 are 71.29 pct identical to residues 1 to 108 of 108 from GenPept : >gb|AAF09023.1| (AF139596) unknown [Shigella flexneri]; IS629 orfA	929285..929611	Shigella flexneri 2a str. 2457T	1077350
NP_836599.1	CDS	S0949	NC_004741.1	929611	930498	D	residues 1 to 295 of 295 are 98.64 pct identical to residues 2 to 296 of 296 from GenPept : >gb|AAL67398.1|AF447814_66 (AF447814)  transposase [Escherichia coli]; IS629 orfB	929611..930498	Shigella flexneri 2a str. 2457T	1077351
NP_836600.1	CDS	S0950	NC_004741.1	930482	930670	D	residues 21 to 62 of 62 are 100.00 pct identical to residues 492 to 533 of 533 from GenPept : >gb|AAL72472.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; hypothetical protein	930482..930670	Shigella flexneri 2a str. 2457T	1077352
NP_836601.1	CDS	S0952	NC_004741.1	931204	931479	D	residues 1 to 91 of 91 are 98.90 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	931204..931479	Shigella flexneri 2a str. 2457T	1077355
NP_836602.1	CDS	S0953	NC_004741.1	931398	931901	D	residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri]; IS1 orfB	931398..931901	Shigella flexneri 2a str. 2457T	1077356
NP_836603.1	CDS	S0956	NC_004741.1	933145	933447	D	residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAL72452.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS600 orfA	933145..933447	Shigella flexneri 2a str. 2457T	1077359
NP_836604.1	CDS	S0957	NC_004741.1	933588	934301	D	residues 1 to 237 of 237 are 91.13 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAL72453.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS600 orfB	933588..934301	Shigella flexneri 2a str. 2457T	1077360
NP_836605.1	CDS	S0958	NC_004741.1	934544	935047	R	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri]; IS1 orfB	complement(934544..935047)	Shigella flexneri 2a str. 2457T	1077361
NP_836606.1	CDS	S0959	NC_004741.1	935162	935875	R	residues 1 to 237 of 237 are 91.13 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAL72453.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS600 orfB	complement(935162..935875)	Shigella flexneri 2a str. 2457T	1077362
NP_836607.1	CDS	S0960	NC_004741.1	936016	936318	R	residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAL72452.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS600 orfA	complement(936016..936318)	Shigella flexneri 2a str. 2457T	1077364
NP_836608.1	CDS	pflA	NC_004741.1	936727	937467	R	activates pyruvate formate-lyase 1 under anaerobic conditions; pyruvate formate lyase-activating enzyme 1	complement(936727..937467)	Shigella flexneri 2a str. 2457T	1077365
NP_836609.1	CDS	pflB	NC_004741.1	937659	939941	R	residues 1 to 760 of 760 are 96.31 pct identical to residues 1 to 760 of 760 from Escherichia coli K-12 : B0903; formate acetyltransferase 1	complement(937659..939941)	Shigella flexneri 2a str. 2457T	1077366
NP_836610.1	CDS	focA	NC_004741.1	939996	940853	R	residues 1 to 285 of 285 are 95.08 pct identical to residues 1 to 285 of 285 from Escherichia coli K-12 : B0904; formate transporter	complement(939996..940853)	Shigella flexneri 2a str. 2457T	1077367
NP_836611.1	CDS	ycaO	NC_004741.1	941259	943019	R	residues 1 to 586 of 586 are 96.75 pct identical to residues 4 to 589 of 589 from Escherichia coli K-12 : B0905; hypothetical protein	complement(941259..943019)	Shigella flexneri 2a str. 2457T	1077368
NP_836612.1	CDS	serC	NC_004741.1	943974	945062	D	catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase	943974..945062	Shigella flexneri 2a str. 2457T	1077371
NP_836613.1	CDS	aroA	NC_004741.1	945133	946416	D	catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase	945133..946416	Shigella flexneri 2a str. 2457T	1077373
NP_836614.1	CDS	yi41	NC_004741.1	946560	947888	D	residues 1 to 442 of 442 are 99.54 pct identical to residues 7 to 448 of 448 from GenPept : >gb|AAK18333.1|AF348706_22 (AF348706) IS4 orf [Shigella flexneri]; IS4 orf	946560..947888	Shigella flexneri 2a str. 2457T	1077374
NP_836615.1	CDS	ycaL	NC_004741.1	948024	948788	D	residues 1 to 254 of 254 are 93.70 pct identical to residues 9 to 262 of 262 from Escherichia coli K-12 : B0909; heat shock protein	948024..948788	Shigella flexneri 2a str. 2457T	1077376
NP_836616.1	CDS	cmk	NC_004741.1	948961	949644	D	Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase	948961..949644	Shigella flexneri 2a str. 2457T	1077363
NP_836617.1	CDS	rpsA	NC_004741.1	949755	951428	D	in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1	949755..951428	Shigella flexneri 2a str. 2457T	1077377
NP_836618.1	CDS	ihfB	NC_004741.1	951588	951872	D	This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit beta	951588..951872	Shigella flexneri 2a str. 2457T	1077378
NP_836619.1	CDS	msbA	NC_004741.1	954375	956123	D	involved in the transport of lipid A across the inner membrane; lipid transporter ATP-binding/permease	954375..956123	Shigella flexneri 2a str. 2457T	1077381
NP_836620.1	CDS	lpxK	NC_004741.1	956120	957106	D	transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase	956120..957106	Shigella flexneri 2a str. 2457T	1077382
NP_836621.1	CDS	ycaQ	NC_004741.1	957143	958375	D	residues 1 to 410 of 410 are 95.12 pct identical to residues 1 to 410 of 410 from Escherichia coli K-12 : B0916; hypothetical protein	957143..958375	Shigella flexneri 2a str. 2457T	1077383
NP_836622.1	CDS	ycaR	NC_004741.1	958427	958609	D	residues 1 to 60 of 60 are 100.00 pct identical to residues 1 to 60 of 60 from Escherichia coli K-12 : B0917; hypothetical protein	958427..958609	Shigella flexneri 2a str. 2457T	1077384
NP_836623.1	CDS	kdsB	NC_004741.1	958606	959352	D	CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase	958606..959352	Shigella flexneri 2a str. 2457T	1077385
NP_836624.1	CDS	S0979	NC_004741.1	959506	960399	D	residues 1 to 297 of 297 are 100.00 pct identical to residues 1 to 297 of 297 from Escherichia coli K-12 : B0919; hypothetical protein	959506..960399	Shigella flexneri 2a str. 2457T	1077386
NP_836625.1	CDS	ycbC	NC_004741.1	960376	961155	R	residues 1 to 259 of 259 are 89.18 pct identical to residues 1 to 259 of 259 from Escherichia coli K-12 : B0920; hypothetical protein	complement(960376..961155)	Shigella flexneri 2a str. 2457T	1080993
NP_836626.1	CDS	smtA	NC_004741.1	961291	962076	D	involved in cellular zinc and cadmium homeostasis by binding excess metal ions to its cysteine sulfurs and histidine nitrogens; expression of smtA in cyanobacteria is repressed by SmtB at low concentrations of zinc; NO elicits release of Zn ions from SmtA; metallothionein SmtA	961291..962076	Shigella flexneri 2a str. 2457T	1077387
NP_836627.1	CDS	mukF	NC_004741.1	962073	963395	D	acts with MukB and MukE to condense the chromosome and allow for segregation during cell division; condesin subunit F	962073..963395	Shigella flexneri 2a str. 2457T	1077389
NP_836628.1	CDS	mukE	NC_004741.1	963403	964080	D	acts with MukB and MukF to condense the chromosome and allow for segregation during cell division; condesin subunit E	963403..964080	Shigella flexneri 2a str. 2457T	1077390
NP_836629.1	CDS	mukB	NC_004741.1	964080	968540	D	SMC (structural maintenance of chromosomes) family of proteins; involved in chromosome condensatin and partitioning; forms a homodimer and the C-terminal is essential for DNA-binding activity while the purified N-terminal domain binds FtsZ; mutations result in cell division defects; cell division protein MukB	964080..968540	Shigella flexneri 2a str. 2457T	1077391
NP_836630.1	CDS	S0985	NC_004741.1	968703	970031	D	residues 1 to 442 of 442 are 99.77 pct identical to residues 7 to 448 of 448 from GenPept : >gb|AAK18333.1|AF348706_22 (AF348706) IS4 orf [Shigella flexneri]; IS4 orf	968703..970031	Shigella flexneri 2a str. 2457T	1077393
NP_836631.1	CDS	ycbB	NC_004741.1	970239	972086	D	residues 1 to 615 of 615 are 96.58 pct identical to residues 1 to 615 of 615 from Escherichia coli K-12 : B0925; hypothetical protein	970239..972086	Shigella flexneri 2a str. 2457T	1077394
NP_836632.1	CDS	ycbK	NC_004741.1	972267	972815	D	residues 1 to 182 of 182 are 93.40 pct identical to residues 1 to 182 of 182 from Escherichia coli K-12 : B0926; hypothetical protein	972267..972815	Shigella flexneri 2a str. 2457T	1077395
NP_836633.1	CDS	ycbL	NC_004741.1	972842	973489	D	residues 1 to 215 of 215 are 99.53 pct identical to residues 1 to 215 of 215 from Escherichia coli K-12 : B0927; hypothetical protein	972842..973489	Shigella flexneri 2a str. 2457T	1077396
NP_836634.1	CDS	aspC	NC_004741.1	973712	974902	R	catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase	complement(973712..974902)	Shigella flexneri 2a str. 2457T	1077370
NP_836635.1	CDS	ompF	NC_004741.1	975087	976175	R	outer membrane porin F; 1a; Ia; b; outer membrane protein F	complement(975087..976175)	Shigella flexneri 2a str. 2457T	1077397
NP_836636.1	CDS	asnC	NC_004741.1	976776	978176	R	catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase	complement(976776..978176)	Shigella flexneri 2a str. 2457T	1077398
NP_836637.1	CDS	pncB	NC_004741.1	978345	979547	R	catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase	complement(978345..979547)	Shigella flexneri 2a str. 2457T	1077392
NP_836638.1	CDS	pepN	NC_004741.1	979813	982428	D	residues 1 to 871 of 871 are 95.63 pct identical to residues 1 to 870 of 870 from Escherichia coli K-12 : B0932; aminopeptidase N	979813..982428	Shigella flexneri 2a str. 2457T	1077399
NP_836639.1	CDS	ssuB	NC_004741.1	982635	983402	R	part of the ABC type transport system SsuABC for aliphatic sulfonates; with SsuA being the periplasmic substrate-binding subunit, SsuB the ATP-binding subunit and SsuC the permease; aliphatic sulfonates transport ATP-binding subunit	complement(982635..983402)	Shigella flexneri 2a str. 2457T	1077400
NP_836640.2	CDS	S0996	NC_004741.1	984027	984932	R	IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats; insertion element IS2 transposase InsD	complement(984027..984932)	Shigella flexneri 2a str. 2457T	1077403
NP_836641.2	CDS	S0997	NC_004741.1	984890	985255	R	IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats; insertion sequence 2 OrfA protein	complement(984890..985255)	Shigella flexneri 2a str. 2457T	1077404
NP_836642.1	CDS	ycbN	NC_004741.1	985538	986683	R	catalyzes the release of sulfite from alkanesulfonates; alkanesulfonate monooxygenase	complement(985538..986683)	Shigella flexneri 2a str. 2457T	1077423
NP_836643.2	CDS	ycbO	NC_004741.1	986680	987639	R	part of the ABC type transport system SsuABC for aliphatic sulfonates; with SsuA being the periplasmic subunit SsuB the ATP-binding subunit and SsuC the permease; alkanesulfonate transporter substrate-binding subunit	complement(986680..987639)	Shigella flexneri 2a str. 2457T	1077405
NP_836644.1	CDS	ycbP	NC_004741.1	987632	988207	R	residues 1 to 191 of 191 are 92.67 pct identical to residues 1 to 191 of 191 from Escherichia coli K-12 : B0937; NAD(P)H-dependent FMN reductase	complement(987632..988207)	Shigella flexneri 2a str. 2457T	1077406
NP_836645.1	CDS	S1002	NC_004741.1	988345	989040	D	residues 78 to 231 of 231 are 82.46 pct identical to residues 16 to 167 of 167 from GenPept : >gb|AAK18538.1|AF348706_227 (AF348706) IS1 orfB [Shigella flexneri]; partial; IS1 orfB, A	988345..989040	Shigella flexneri 2a str. 2457T	1077407
NP_836646.1	CDS	S1004	NC_004741.1	989411	989914	R	residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri]; IS1 orfB	complement(989411..989914)	Shigella flexneri 2a str. 2457T	1077409
NP_836647.1	CDS	S1005	NC_004741.1	989833	990108	R	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(989833..990108)	Shigella flexneri 2a str. 2457T	1077410
NP_836648.1	CDS	ycbS	NC_004741.1	990248	992848	D	residues 1 to 866 of 866 are 94.91 pct identical to residues 1 to 866 of 866 from Escherichia coli K-12 : B0940; outer membrane protein	990248..992848	Shigella flexneri 2a str. 2457T	1080983
NP_836649.1	CDS	S1007	NC_004741.1	992839	993822	D	residues 1 to 325 of 327 are 89.84 pct identical to residues 1 to 325 of 356 from Escherichia coli K-12 : B0941; fimbrial protein	992839..993822	Shigella flexneri 2a str. 2457T	1077411
NP_836650.1	CDS	S1008	NC_004741.1	993920	994462	D	residues 1 to 180 of 180 are 92.22 pct identical to residues 1 to 180 of 180 from Escherichia coli K-12 : B0942; fimbrial-like protein	993920..994462	Shigella flexneri 2a str. 2457T	1077412
NP_836651.1	CDS	S1009	NC_004741.1	994422	994985	D	residues 1 to 187 of 187 are 90.90 pct identical to residues 1 to 187 of 187 from Escherichia coli K-12 : B0943; fimbrial-like protein	994422..994985	Shigella flexneri 2a str. 2457T	1077413
NP_836652.1	CDS	ycbF	NC_004741.1	994951	995688	D	residues 1 to 245 of 245 are 82.85 pct identical to residues 1 to 245 of 245 from Escherichia coli K-12 : B0944; putativi pili assembly chaperone	994951..995688	Shigella flexneri 2a str. 2457T	1077414
NP_836653.1	CDS	pyrD	NC_004741.1	995800	996810	D	catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2	995800..996810	Shigella flexneri 2a str. 2457T	1077415
NP_836654.1	CDS	ycbW	NC_004741.1	996948	997526	D	residues 1 to 192 of 192 are 99.47 pct identical to residues 1 to 192 of 192 from Escherichia coli K-12 : B0946; hypothetical protein	996948..997526	Shigella flexneri 2a str. 2457T	1077416
NP_836655.1	CDS	S1013	NC_004741.1	997523	998632	R	residues 1 to 369 of 369 are 95.66 pct identical to residues 1 to 369 of 369 from Escherichia coli K-12 : B0947; hypothetical protein	complement(997523..998632)	Shigella flexneri 2a str. 2457T	1077419
NP_836656.1	CDS	rlmL	NC_004741.1	998876	1000984	D	catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA; 23S rRNA m(2)G2445 methyltransferase	998876..1000984	Shigella flexneri 2a str. 2457T	1077420
NP_836657.1	CDS	uup	NC_004741.1	1000996	1002903	D	Uup; in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity; mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth; ABC transporter ATPase	1000996..1002903	Shigella flexneri 2a str. 2457T	1077561
NP_836658.1	CDS	pqiA	NC_004741.1	1003033	1004286	D	residues 1 to 417 of 417 are 96.40 pct identical to residues 1 to 417 of 417 from Escherichia coli K-12 : B0950; paraquat-inducible protein A	1003033..1004286	Shigella flexneri 2a str. 2457T	1077422
NP_836659.1	CDS	pqiB	NC_004741.1	1004291	1005931	D	residues 1 to 546 of 546 are 97.43 pct identical to residues 1 to 546 of 546 from Escherichia coli K-12 : B0951; paraquat-inducible protein B	1004291..1005931	Shigella flexneri 2a str. 2457T	1077516
NP_836660.1	CDS	ymbA	NC_004741.1	1005928	1006491	D	residues 6 to 187 of 187 are 99.45 pct identical to residues 1 to 182 of 182 from Escherichia coli K-12 : B0952; hypothetical protein	1005928..1006491	Shigella flexneri 2a str. 2457T	1077424
NP_836661.1	CDS	rmf	NC_004741.1	1006747	1006914	D	residues 1 to 55 of 55 are 98.18 pct identical to residues 1 to 55 of 55 from Escherichia coli K-12 : B0953; ribosome modulation factor	1006747..1006914	Shigella flexneri 2a str. 2457T	1077425
NP_836662.1	CDS	fabA	NC_004741.1	1006984	1007502	R	catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP; 3-hydroxydecanoyl-ACP dehydratase	complement(1006984..1007502)	Shigella flexneri 2a str. 2457T	1077245
NP_836663.1	CDS	S1021	NC_004741.1	1007571	1009331	R	residues 1 to 586 of 586 are 97.44 pct identical to residues 1 to 586 of 586 from Escherichia coli K-12 : B0955; ATP-dependent protease	complement(1007571..1009331)	Shigella flexneri 2a str. 2457T	1077426
NP_836664.1	CDS	ycbG	NC_004741.1	1009516	1009968	D	residues 1 to 150 of 150 are 100.00 pct identical to residues 1 to 150 of 150 from Escherichia coli K-12 : B0956; hypothetical protein	1009516..1009968	Shigella flexneri 2a str. 2457T	1077427
NP_836665.1	CDS	ompA	NC_004741.1	1010044	1011090	R	OmpA is believed to be a porin, involved in diffusion of nonspecific small solutes across the outer membrane. It is the most abundant integral protein of the outer membrane of E. coli, and it is known to play a role as a phage receptor, a mediator of F-factor dependent conjugation, and in maintaining the structural shape of the outer membrane; 3a; II*; G; d; outer membrane protein A	complement(1010044..1011090)	Shigella flexneri 2a str. 2457T	1077401
NP_836666.1	CDS	sulA	NC_004741.1	1011446	1011955	R	residues 1 to 169 of 169 are 79.88 pct identical to residues 1 to 169 of 169 from Escherichia coli K-12 : B0958; suppressor of lon; SOS cell division inhibitor	complement(1011446..1011955)	Shigella flexneri 2a str. 2457T	1077428
NP_836667.1	CDS	S1025	NC_004741.1	1012174	1012599	D	residues 1 to 137 of 141 are 100.00 pct identical to residues 1 to 137 of 209 from Escherichia coli K-12 : B0959; hypothetical protein	1012174..1012599	Shigella flexneri 2a str. 2457T	1077353
NP_836668.2	CDS	S1026	NC_004741.1	1012675	1013040	D	IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats; insertion sequence 2 OrfA protein	1012675..1013040	Shigella flexneri 2a str. 2457T	1080912
NP_836669.1	CDS	S1027	NC_004741.1	1013019	1013651	D	residues 1 to 195 of 195 are 98.97 pct identical to residues 23 to 217 of 301 from GenPept : >gb|AAL72414.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS2 orfB	1013019..1013651	Shigella flexneri 2a str. 2457T	1077429
NP_836670.1	CDS	S1028	NC_004741.1	1013611	1015776	R	residues 1 to 710 of 721 are 92.39 pct identical to residues 1 to 710 of 720 from Escherichia coli K-12 : B0960; hypothetical protein	complement(1013611..1015776)	Shigella flexneri 2a str. 2457T	1077430
NP_836671.1	CDS	yccF	NC_004741.1	1015786	1016232	R	residues 1 to 148 of 148 are 91.89 pct identical to residues 1 to 148 of 148 from Escherichia coli K-12 : B0961; hypothetical protein	complement(1015786..1016232)	Shigella flexneri 2a str. 2457T	1077431
NP_836672.1	CDS	helD	NC_004741.1	1016355	1018409	D	catalyzes the ATP-dependent unwinding of duplex DNA in the 3' to 5' direction with respect to the bound single strand; DNA helicase IV	1016355..1018409	Shigella flexneri 2a str. 2457T	1077432
NP_836673.2	CDS	mgsA	NC_004741.1	1018441	1018899	R	catalyzes the formation of methylglyoxal from glycerone phosphate; methylglyoxal synthase	complement(1018441..1018899)	Shigella flexneri 2a str. 2457T	1077433
NP_836674.1	CDS	S1032	NC_004741.1	1018995	1019657	R	residues 1 to 220 of 220 are 100.00 pct identical to residues 1 to 220 of 220 from Escherichia coli K-12 : B0964; hypothetical protein	complement(1018995..1019657)	Shigella flexneri 2a str. 2457T	1077434
NP_836675.1	CDS	S1033	NC_004741.1	1019776	1020243	D	residues 1 to 155 of 155 are 99.35 pct identical to residues 10 to 164 of 164 from Escherichia coli K-12 : B0965; hypothetical protein	1019776..1020243	Shigella flexneri 2a str. 2457T	1077435
NP_836676.1	CDS	yccV	NC_004741.1	1020288	1020656	R	residues 1 to 122 of 122 are 100.00 pct identical to residues 1 to 122 of 122 from Escherichia coli K-12 : B0966; hypothetical protein	complement(1020288..1020656)	Shigella flexneri 2a str. 2457T	1077436
NP_836677.1	CDS	S1035	NC_004741.1	1020663	1021766	R	residues 1 to 367 of 367 are 97.00 pct identical to residues 1 to 367 of 367 from Escherichia coli K-12 : B0967; oxidoreductase	complement(1020663..1021766)	Shigella flexneri 2a str. 2457T	1077437
NP_836678.1	CDS	S1036	NC_004741.1	1021948	1022226	D	residues 1 to 92 of 92 are 97.82 pct identical to residues 1 to 92 of 92 from Escherichia coli K-12 : B0968; hypothetical protein	1021948..1022226	Shigella flexneri 2a str. 2457T	1077438
NP_836679.2	CDS	yccK	NC_004741.1	1022223	1022552	R	transfers sulfur from TusBCD complex to MnmA; involved in thiouridation of U34 position of some tRNAs; sulfur transfer protein TusE	complement(1022223..1022552)	Shigella flexneri 2a str. 2457T	1077439
NP_836680.1	CDS	yccA	NC_004741.1	1022643	1023302	R	residues 1 to 219 of 219 are 99.54 pct identical to residues 1 to 219 of 219 from Escherichia coli K-12 : B0970; hypothetical protein	complement(1022643..1023302)	Shigella flexneri 2a str. 2457T	1077440
NP_836681.1	CDS	hyaA	NC_004741.1	1024022	1025140	D	residues 1 to 372 of 372 are 91.12 pct identical to residues 1 to 372 of 372 from Escherichia coli K-12 : B0972; hydrogenase-1 small subunit	1024022..1025140	Shigella flexneri 2a str. 2457T	1077442
NP_836682.1	CDS	hyaB	NC_004741.1	1025137	1026930	D	involved in hydrogen cycling during fermentative growth; hydrogenase 1 large subunit	1025137..1026930	Shigella flexneri 2a str. 2457T	1077443
NP_836683.1	CDS	hyaC	NC_004741.1	1026949	1027656	D	residues 1 to 235 of 235 are 99.57 pct identical to residues 1 to 235 of 235 from Escherichia coli K-12 : B0974; hydrogenase 1 b-type cytochrome subunit	1026949..1027656	Shigella flexneri 2a str. 2457T	1077444
NP_836684.1	CDS	hyaD	NC_004741.1	1027653	1028240	D	HyaD; endopeptidase involved in the cleavage of the C-terminus end of HyaB (the large subunit of hydrogenase 1); hydrogenase 1 maturation protease	1027653..1028240	Shigella flexneri 2a str. 2457T	1077445
NP_836685.1	CDS	hyaE	NC_004741.1	1028237	1028635	D	involved in processing hydrogenases HyaA and HyaB; hydrogenase-1 operon protein HyaE	1028237..1028635	Shigella flexneri 2a str. 2457T	1077446
NP_836686.1	CDS	hyaF	NC_004741.1	1028632	1029489	D	residues 1 to 285 of 285 are 95.08 pct identical to residues 1 to 285 of 285 from Escherichia coli K-12 : B0977; hydrogenase-1 operon protein hyaF	1028632..1029489	Shigella flexneri 2a str. 2457T	1077447
NP_836687.1	CDS	appC	NC_004741.1	1029623	1031167	D	residues 1 to 514 of 514 are 96.69 pct identical to residues 1 to 514 of 514 from Escherichia coli K-12 : B0978; third cytochrome oxidase, subunit I	1029623..1031167	Shigella flexneri 2a str. 2457T	1077448
NP_836688.1	CDS	appB	NC_004741.1	1031179	1032315	D	residues 1 to 378 of 378 are 91.00 pct identical to residues 1 to 378 of 378 from Escherichia coli K-12 : B0979; third cytochrome oxidase, subunit II	1031179..1032315	Shigella flexneri 2a str. 2457T	1077449
NP_836689.1	CDS	appA	NC_004741.1	1032499	1033797	D	residues 18 to 432 of 432 are 95.18 pct identical to residues 18 to 432 of 432 from Escherichia coli K-12 : B0980; phosphoanhydride phosphorylase	1032499..1033797	Shigella flexneri 2a str. 2457T	1077450
NP_836690.2	CDS	etp	NC_004741.1	1036098	1036544	R	Etk and Etp are a tyrosine kinase-tyrosine phosphatase pair, etp dephosphorylates etk; phosphotyrosine-protein phosphatase	complement(1036098..1036544)	Shigella flexneri 2a str. 2457T	1077452
NP_836691.1	CDS	yccZ	NC_004741.1	1036532	1037671	R	residues 1 to 379 of 379 are 100.00 pct identical to residues 1 to 379 of 379 from Escherichia coli K-12 : B0983; involved in exopolysaccharide production; exopolysaccharide export protein	complement(1036532..1037671)	Shigella flexneri 2a str. 2457T	1077453
NP_836692.1	CDS	ymcA	NC_004741.1	1037717	1039813	R	residues 1 to 698 of 698 are 98.85 pct identical to residues 1 to 698 of 698 from Escherichia coli K-12 : B0984; hypothetical protein	complement(1037717..1039813)	Shigella flexneri 2a str. 2457T	1077454
NP_836693.1	CDS	ymcB	NC_004741.1	1039813	1040559	R	residues 1 to 248 of 248 are 99.59 pct identical to residues 1 to 248 of 248 from Escherichia coli K-12 : B0985; hypothetical protein	complement(1039813..1040559)	Shigella flexneri 2a str. 2457T	1077455
NP_836694.1	CDS	ymcC	NC_004741.1	1040556	1041200	R	residues 1 to 214 of 214 are 89.71 pct identical to residues 1 to 214 of 214 from Escherichia coli K-12 : B0986; regulator	complement(1040556..1041200)	Shigella flexneri 2a str. 2457T	1077456
NP_836695.1	CDS	ymcD	NC_004741.1	1041307	1041630	R	residues 1 to 107 of 107 are 28.97 pct identical to residues 1 to 107 of 107 from Escherichia coli K-12 : B0987; hypothetical protein	complement(1041307..1041630)	Shigella flexneri 2a str. 2457T	1077457
NP_836696.1	CDS	cspH	NC_004741.1	1042054	1042266	R	residues 1 to 70 of 70 are 100.00 pct identical to residues 1 to 70 of 70 from Escherichia coli K-12 : B0989; cold shock-like protein	complement(1042054..1042266)	Shigella flexneri 2a str. 2457T	1077458
NP_836697.1	CDS	S1058	NC_004741.1	1042621	1042896	D	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	1042621..1042896	Shigella flexneri 2a str. 2457T	1077459
NP_836698.1	CDS	S1059	NC_004741.1	1042815	1043318	D	residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri]; IS1 orfB	1042815..1043318	Shigella flexneri 2a str. 2457T	1077460
NP_836699.1	CDS	cspG	NC_004741.1	1043340	1043540	D	residues 2 to 71 of 71 are 97.14 pct identical to residues 1 to 70 of 70 from Escherichia coli K-12 : B0990; cold shock protein CspG	1043340..1043540	Shigella flexneri 2a str. 2457T	1077461
NP_836700.1	CDS	ymcE	NC_004741.1	1043714	1043944	D	residues 1 to 76 of 76 are 96.05 pct identical to residues 1 to 76 of 76 from Escherichia coli K-12 : B0991; cold shock gene	1043714..1043944	Shigella flexneri 2a str. 2457T	1077462
NP_836701.1	CDS	yccM	NC_004741.1	1044156	1045229	R	residues 1 to 357 of 357 are 95.23 pct identical to residues 1 to 357 of 357 from Escherichia coli K-12 : B0992; hypothetical protein	complement(1044156..1045229)	Shigella flexneri 2a str. 2457T	1077463
NP_836702.1	CDS	torT	NC_004741.1	1048125	1049153	D	periplasmic sensory protein associated with the TorRS two-component regulatory system; TMAO reductase system periplasmic protein TorT	1048125..1049153	Shigella flexneri 2a str. 2457T	1077465
NP_836703.1	CDS	torR	NC_004741.1	1049126	1049818	R	response regulator in two-component regulatory system with TorS; involved in regulation of trimethylamine N-oxide reductase genes; DNA-binding transcriptional regulator TorR	complement(1049126..1049818)	Shigella flexneri 2a str. 2457T	1077466
NP_836704.1	CDS	torC	NC_004741.1	1049905	1051077	D	residues 1 to 390 of 390 are 94.87 pct identical to residues 1 to 390 of 390 from Escherichia coli K-12 : B0996; trimethylamine N-oxide reductase, cytochrome c-type subunit	1049905..1051077	Shigella flexneri 2a str. 2457T	1077467
NP_836705.1	CDS	S1069	NC_004741.1	1053820	1054323	R	residues 1 to 167 of 167 are 89.22 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri]; IS1 orfB	complement(1053820..1054323)	Shigella flexneri 2a str. 2457T	1077470
NP_836706.1	CDS	S1070	NC_004741.1	1054242	1054517	R	residues 1 to 91 of 91 are 98.90 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(1054242..1054517)	Shigella flexneri 2a str. 2457T	1078500
NP_836707.1	CDS	yccD	NC_004741.1	1055083	1055388	R	with CpbA modulates the activity of the dnaK chaperone system; interacts with CbpA and inhibits both the DnaJ-like co-chaperone activity and the DNA binding activity of CbpA; chaperone-modulator protein CbpM	complement(1055083..1055388)	Shigella flexneri 2a str. 2457T	1077471
NP_836708.1	CDS	cbpA	NC_004741.1	1055388	1056308	R	functional analog of DnaJ; co-chaperone with DnaK, molecular chaperone in an adaptive response to environmental stresses other than heat shock; curved DNA-binding protein CbpA	complement(1055388..1056308)	Shigella flexneri 2a str. 2457T	1077472
NP_836709.1	CDS	yccE	NC_004741.1	1056569	1057825	D	residues 1 to 417 of 418 are 88.00 pct identical to residues 1 to 417 of 418 from Escherichia coli K-12 : B1001; hypothetical protein	1056569..1057825	Shigella flexneri 2a str. 2457T	1077473
NP_836710.1	CDS	agp	NC_004741.1	1058118	1059359	D	residues 1 to 413 of 413 are 98.54 pct identical to residues 1 to 413 of 413 from Escherichia coli K-12 : B1002; glucose-1-phosphatase/inositol phosphatase	1058118..1059359	Shigella flexneri 2a str. 2457T	1077474
NP_836711.1	CDS	yccJ	NC_004741.1	1059397	1059624	R	residues 1 to 75 of 75 are 100.00 pct identical to residues 1 to 75 of 75 from Escherichia coli K-12 : B1003; hypothetical protein	complement(1059397..1059624)	Shigella flexneri 2a str. 2457T	1076625
NP_836712.1	CDS	wrbA	NC_004741.1	1059645	1060241	R	stationary phase that binds TrpR repressor; TrpR binding protein WrbA	complement(1059645..1060241)	Shigella flexneri 2a str. 2457T	1077475
NP_836713.1	CDS	ycdF	NC_004741.1	1060451	1060681	D	residues 1 to 76 of 76 are 61.84 pct identical to residues 1 to 76 of 76 from Escherichia coli K-12 : B1005; hypothetical protein	1060451..1060681	Shigella flexneri 2a str. 2457T	1077476
NP_836714.1	CDS	ycdG	NC_004741.1	1060803	1062197	R	residues 1 to 464 of 464 are 92.24 pct identical to residues 1 to 464 of 464 from Escherichia coli K-12 : B1006; transporter	complement(1060803..1062197)	Shigella flexneri 2a str. 2457T	1077477
NP_836715.1	CDS	S1080	NC_004741.1	1062152	1062610	R	residues 1 to 152 of 152 are 99.34 pct identical to residues 1 to 152 of 152 from Escherichia coli K-12 : B1007; hypothetical protein	complement(1062152..1062610)	Shigella flexneri 2a str. 2457T	1077478
NP_836716.1	CDS	S1081	NC_004741.1	1062657	1063247	R	residues 1 to 196 of 196 are 97.44 pct identical to residues 1 to 196 of 196 from Escherichia coli K-12 : B1008; hypothetical protein	complement(1062657..1063247)	Shigella flexneri 2a str. 2457T	1077479
NP_836717.1	CDS	S1082	NC_004741.1	1063257	1064057	R	residues 1 to 266 of 266 are 83.83 pct identical to residues 1 to 266 of 266 from Escherichia coli K-12 : B1009; acetyltransferase	complement(1063257..1064057)	Shigella flexneri 2a str. 2457T	1077480
NP_836718.1	CDS	S1083	NC_004741.1	1064065	1064451	R	residues 1 to 128 of 128 are 99.21 pct identical to residues 1 to 128 of 128 from Escherichia coli K-12 : B1010; hypothetical protein	complement(1064065..1064451)	Shigella flexneri 2a str. 2457T	1077481
NP_836719.1	CDS	S1084	NC_004741.1	1064463	1065197	R	residues 1 to 244 of 244 are 97.95 pct identical to residues 1 to 244 of 244 from Escherichia coli K-12 : B1011; synthetase	complement(1064463..1065197)	Shigella flexneri 2a str. 2457T	1077482
NP_836720.1	CDS	S1085	NC_004741.1	1065155	1066303	R	residues 1 to 382 of 382 are 95.54 pct identical to residues 1 to 382 of 382 from Escherichia coli K-12 : B1012; hypothetical protein	complement(1065155..1066303)	Shigella flexneri 2a str. 2457T	1077483
NP_836721.1	CDS	ycdC	NC_004741.1	1066534	1067172	D	residues 1 to 212 of 212 are 91.50 pct identical to residues 1 to 212 of 212 from Escherichia coli K-12 : B1013; tet operon regulator	1066534..1067172	Shigella flexneri 2a str. 2457T	1077484
NP_836722.1	CDS	S1087	NC_004741.1	1067466	1068653	R	residues 1 to 388 of 395 are 97.16 pct identical to residues 1 to 388 of 406 from GenPept : >gb|AAK85176.1| (AF294823) transposase [Shigella sonnei]; IS91	complement(1067466..1068653)	Shigella flexneri 2a str. 2457T	1077485
NP_836723.1	CDS	S1088	NC_004741.1	1068670	1069017	R	residues 1 to 115 of 115 are 89.56 pct identical to residues 1 to 115 of 121 from GenPept : >emb|CAC14584.1| (X17114) ORF 121 [Escherichia coli]; IS91	complement(1068670..1069017)	Shigella flexneri 2a str. 2457T	1077486
NP_836724.1	CDS	S1089	NC_004741.1	1069073	1069780	D	residues 12 to 235 of 235 are 91.96 pct identical to residues 20 to 243 of 243 from Escherichia coli K-12 : B1017; cytochrome	1069073..1069780	Shigella flexneri 2a str. 2457T	1077487
NP_836725.1	CDS	ycdO	NC_004741.1	1069838	1070965	D	residues 1 to 375 of 375 are 95.46 pct identical to residues 1 to 375 of 375 from Escherichia coli K-12 : B1018; hypothetical protein	1069838..1070965	Shigella flexneri 2a str. 2457T	1077488
NP_836726.1	CDS	ycdB	NC_004741.1	1070971	1072236	D	residues 1 to 421 of 421 are 97.87 pct identical to residues 1 to 423 of 423 from Escherichia coli K-12 : B1019; hypothetical protein	1070971..1072236	Shigella flexneri 2a str. 2457T	1077489
NP_836727.1	CDS	S1093	NC_004741.1	1073741	1074607	R	residues 1 to 288 of 288 are 100.00 pct identical to residues 1 to 288 of 288 from GenPept : >gb|AAL57519.1|AF453441_3 (AF453441) transposase 1 [Escherichia coli]; IS3 orfB	complement(1073741..1074607)	Shigella flexneri 2a str. 2457T	1077491
NP_836728.1	CDS	S1094	NC_004741.1	1074604	1074903	R	residues 1 to 99 of 99 are 100.00 pct identical to residues 1 to 99 of 99 from GenPept : >gb|AAL57580.1|AF453442_9 (AF453442) transposase 2 [Escherichia coli]; IS3 orfA	complement(1074604..1074903)	Shigella flexneri 2a str. 2457T	1077492
NP_836729.1	CDS	ycdU	NC_004741.1	1075495	1076481	D	residues 1 to 328 of 328 are 94.20 pct identical to residues 1 to 328 of 328 from Escherichia coli K-12 : B1029; hypothetical protein	1075495..1076481	Shigella flexneri 2a str. 2457T	1077494
NP_836730.1	CDS	ycdX	NC_004741.1	1077989	1078726	D	residues 1 to 245 of 245 are 87.34 pct identical to residues 1 to 245 of 245 from Escherichia coli K-12 : B1034; hydrolase	1077989..1078726	Shigella flexneri 2a str. 2457T	1077499
NP_836731.1	CDS	ycdY	NC_004741.1	1078750	1079304	D	residues 1 to 184 of 184 are 99.45 pct identical to residues 1 to 184 of 184 from Escherichia coli K-12 : B1035; oxidoreductase component	1078750..1079304	Shigella flexneri 2a str. 2457T	1077500
NP_836732.1	CDS	ycdZ	NC_004741.1	1079376	1079897	D	residues 1 to 173 of 173 are 99.42 pct identical to residues 7 to 179 of 179 from Escherichia coli K-12 : B1036; hypothetical protein	1079376..1079897	Shigella flexneri 2a str. 2457T	1077501
NP_836733.1	CDS	csgF	NC_004741.1	1080763	1081179	R	nucleator protein that participates in the polymerization of curlin (CsgA) subunits into curli (extracellular fibers from Escherichia and Salmonella spp. that are involved in the colonization of inert surfaces and biofilm formation); part of the curli secretion and assembly protein complex; curli assembly protein CsgF	complement(1080763..1081179)	Shigella flexneri 2a str. 2457T	1077503
NP_836734.1	CDS	csgE	NC_004741.1	1081204	1081593	R	chaperone-like protein that participates in the polymerization of curlin (CsgA) subunits into curli (extracellular fibers from Escherichia and Salmonella spp. that are involved in the colonization of inert surfaces and biofilm formation); part of the curli secretion and assembly protein complex; curli assembly protein CsgE	complement(1081204..1081593)	Shigella flexneri 2a str. 2457T	1077504
NP_836735.1	CDS	csgD	NC_004741.1	1081598	1082248	R	activates the csgBA and csgDEFG operons involved in biofilm formation; DNA-binding transcriptional regulator CsgD	complement(1081598..1082248)	Shigella flexneri 2a str. 2457T	1077505
NP_836736.1	CDS	csgB	NC_004741.1	1083002	1083457	D	CsgB; functions as a nucleator in the assembly of curli (coiled surface structures) on the cell surface; curlin minor subunit	1083002..1083457	Shigella flexneri 2a str. 2457T	1077506
NP_836737.1	CDS	S1110	NC_004741.1	1083671	1083973	D	residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAF09029.1| (AF139596) unknown [Shigella flexneri]; IS600	1083671..1083973	Shigella flexneri 2a str. 2457T	1077508
NP_836738.1	CDS	S1111	NC_004741.1	1084114	1084752	D	residues 1 to 181 of 212 are 88.39 pct identical to residues 36 to 216 of 272 from GenPept : >gb|AAL72453.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS600 ORF2	1084114..1084752	Shigella flexneri 2a str. 2457T	1077509
NP_836739.1	CDS	csgC	NC_004741.1	1085157	1085489	D	involved in autoagglutination of curliated cells; not involved in production of curli fibers; autoagglutination protein	1085157..1085489	Shigella flexneri 2a str. 2457T	1077510
NP_836740.1	CDS	S1114	NC_004741.1	1085610	1085921	D	residues 1 to 103 of 103 are 98.05 pct identical to residues 1 to 103 of 103 from Escherichia coli K-12 : B1044; hypothetical protein	1085610..1085921	Shigella flexneri 2a str. 2457T	1077511
NP_836741.1	CDS	S1115	NC_004741.1	1086016	1086549	D	residues 1 to 177 of 177 are 99.43 pct identical to residues 1 to 177 of 177 from Escherichia coli K-12 : B1045; hypothetical protein	1086016..1086549	Shigella flexneri 2a str. 2457T	1077512
NP_836742.1	CDS	ymdC	NC_004741.1	1086491	1087972	D	residues 1 to 493 of 493 are 99.79 pct identical to residues 1 to 493 of 493 from Escherichia coli K-12 : B1046; synthase	1086491..1087972	Shigella flexneri 2a str. 2457T	1077513
NP_836743.1	CDS	mdoC	NC_004741.1	1087980	1089137	R	required for the transfer of succinyl residues to the glucan backbone; glucans biosynthesis protein	complement(1087980..1089137)	Shigella flexneri 2a str. 2457T	1077514
NP_836744.1	CDS	mdoG	NC_004741.1	1089531	1091066	D	involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan; glucan biosynthesis protein G	1089531..1091066	Shigella flexneri 2a str. 2457T	1077515
NP_836745.1	CDS	mdoH	NC_004741.1	1091059	1093602	D	necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space; glucosyltransferase MdoH	1091059..1093602	Shigella flexneri 2a str. 2457T	1077517
NP_836746.1	CDS	S1120	NC_004741.1	1094152	1095207	R	residues 1 to 351 of 351 are 98.00 pct identical to residues 1 to 351 of 406 from GenPept : >gb|AAK85176.1| (AF294823) transposase [Shigella sonnei]; IS91 orf	complement(1094152..1095207)	Shigella flexneri 2a str. 2457T	1077518
NP_836747.1	CDS	S4816	NC_004741.1	1095207	1095629	R	residues 1 to 140 of 140 are 100.00 pct identical to residues 1 to 140 of 140 from NRprotein_Feb03 : >ref|NP_706937.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] ref|NP_706962.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] ref|NP_707627.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gb|AAN42644.1|AE015130_3 orf, conserved hypo; hypothetical protein	complement(1095207..1095629)	Shigella flexneri 2a str. 2457T	1077519
NP_836748.1	CDS	S4815	NC_004741.1	1095591	1096931	D	residues 22 to 289 of 446 are 25.09 pct identical to residues 246 to 502 of 1525 from NRprotein_Feb03 : >ref|NP_395347.1|  membrane protein [Yersinia pestis] pir||T14961 hypothetical protein Y1044 - Yersinia pestis plasmid pMT1 gb|AAC13170.1| protein HI1514 homolog [Yersinia pestis] gb|AAC82704.1| unknown [Yersinia pestis] emb|CAB55193.1|  membrane protein [Yersinia pestis]; hypothetical protein	1095591..1096931	Shigella flexneri 2a str. 2457T	1076637
NP_836749.1	CDS	S4817	NC_004741.1	1096928	1097200	D	no significant similarities; hypothetical protein	1096928..1097200	Shigella flexneri 2a str. 2457T	1077520
NP_836750.1	CDS	S1123	NC_004741.1	1097304	1097924	R	residues 1 to 206 of 206 are 99.51 pct identical to residues 1 to 206 of 206 from GenPept : >gb|AAD44736.1|AF141323_7 (AF141323) TnpC [Shigella flexneri]; partial; IS629 orfB	complement(1097304..1097924)	Shigella flexneri 2a str. 2457T	1077521
NP_836751.1	CDS	S1124	NC_004741.1	1098187	1098513	R	residues 1 to 108 of 108 are 89.81 pct identical to residues 1 to 108 of 108 from GenPept : >gb|AAL72456.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS629 orfA	complement(1098187..1098513)	Shigella flexneri 2a str. 2457T	1077522
NP_836752.1	CDS	S1126	NC_004741.1	1098945	1099247	D	residues 1 to 100 of 100 are 100.00 pct identical to residues 13 to 112 of 112 from GenPept : >gb|AAL72382.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS911 orfA	1098945..1099247	Shigella flexneri 2a str. 2457T	1077523
NP_836753.1	CDS	S1127	NC_004741.1	1099436	1100113	D	residues 1 to 225 of 225 are 100.00 pct identical to residues 55 to 279 of 279 from GenPept : >gb|AAL72449.1| (AF386526) InsB [Shigella flexneri 2a]; IS911 orfB	1099436..1100113	Shigella flexneri 2a str. 2457T	1077524
NP_836754.1	CDS	S1128	NC_004741.1	1100131	1100553	R	no significant similarities; hypothetical protein	complement(1100131..1100553)	Shigella flexneri 2a str. 2457T	1077525
NP_836755.2	CDS	S1129	NC_004741.1	1100686	1101051	D	IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats; insertion sequence 2 OrfA protein	1100686..1101051	Shigella flexneri 2a str. 2457T	1077526
NP_836756.2	CDS	S1130	NC_004741.1	1101009	1101914	D	IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats; insertion element IS2 transposase InsD	1101009..1101914	Shigella flexneri 2a str. 2457T	1077527
NP_836757.1	CDS	S1131	NC_004741.1	1102310	1102636	D	residues 1 to 108 of 108 are 89.81 pct identical to residues 1 to 108 of 108 from GenPept : >gb|AAL72456.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS629 orfA	1102310..1102636	Shigella flexneri 2a str. 2457T	1077528
NP_836758.1	CDS	S1132	NC_004741.1	1102872	1103519	D	residues 1 to 215 of 215 are 99.06 pct identical to residues 1 to 215 of 215 from GenPept : >gb|AAK18507.1|AF348706_196 (AF348706) IS629 orf [Shigella flexneri]; partial; IS629 orfB	1102872..1103519	Shigella flexneri 2a str. 2457T	1077529
NP_836759.1	CDS	S1133	NC_004741.1	1103807	1104109	D	residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAL72452.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS600 orfA	1103807..1104109	Shigella flexneri 2a str. 2457T	1077530
NP_836760.1	CDS	S1134	NC_004741.1	1104250	1104729	D	residues 1 to 144 of 159 are 85.41 pct identical to residues 36 to 179 of 272 from GenPept : >gb|AAL72453.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; partial; IS600 orfB	1104250..1104729	Shigella flexneri 2a str. 2457T	1077531
NP_836761.1	CDS	S1135	NC_004741.1	1104738	1104962	D	residues 1 to 74 of 74 are 98.64 pct identical to residues 73 to 146 of 146 from GenPept : >gb|AAL72524.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; partial; IS600 orfB	1104738..1104962	Shigella flexneri 2a str. 2457T	1077532
NP_836762.1	CDS	S1136	NC_004741.1	1104987	1105919	R	residues 1 to 306 of 310 are 43.31 pct identical to residues 1 to 310 of 508 from GenPept : >gb|AAG55968.1|AE005329_12 (AE005329) unknown protein encoded by prophage CP-933X [Escherichia coli O157:H7 EDL933]; hypothetical protein	complement(1104987..1105919)	Shigella flexneri 2a str. 2457T	1077533
NP_836763.1	CDS	htrB	NC_004741.1	1106312	1107232	R	Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis lauroyl acyltransferase	complement(1106312..1107232)	Shigella flexneri 2a str. 2457T	1077535
NP_836764.1	CDS	yceA	NC_004741.1	1107457	1108509	D	residues 1 to 350 of 350 are 99.71 pct identical to residues 1 to 350 of 350 from Escherichia coli K-12 : B1055; hypothetical protein	1107457..1108509	Shigella flexneri 2a str. 2457T	1077536
NP_836765.1	CDS	yceI	NC_004741.1	1108551	1109126	R	residues 1 to 191 of 191 are 92.67 pct identical to residues 1 to 191 of 191 from Escherichia coli K-12 : B1056; hypothetical protein	complement(1108551..1109126)	Shigella flexneri 2a str. 2457T	1077537
NP_836766.1	CDS	S1141	NC_004741.1	1109130	1109696	R	residues 1 to 188 of 188 are 83.51 pct identical to residues 1 to 188 of 188 from Escherichia coli K-12 : B1057; cytochrome	complement(1109130..1109696)	Shigella flexneri 2a str. 2457T	1077538
NP_836767.1	CDS	yceO	NC_004741.1	1109957	1110070	R	residues 1 to 37 of 37 are 100.00 pct identical to residues 10 to 46 of 46 from Escherichia coli K-12 : B1058; hypothetical protein	complement(1109957..1110070)	Shigella flexneri 2a str. 2457T	1077539
NP_836768.1	CDS	solA	NC_004741.1	1110118	1111236	R	catalyzes the demethylation of N-methyl-L-tryptophan forming L-tryptophan and formaldehyde; FAD-binding; can also catalyze the demethylation of other N-methyl amino acids; N-methyltryptophan oxidase	complement(1110118..1111236)	Shigella flexneri 2a str. 2457T	1077540
NP_836769.2	CDS	bssS	NC_004741.1	1111351	1111605	R	BssS; regulator of biofilm through signal secretion; disruption of this gene in Escherichia coli led to effects on biofilm formation, alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2 uptake and processing; biofilm formation regulatory protein BssS	complement(1111351..1111605)	Shigella flexneri 2a str. 2457T	1077541
NP_836770.1	CDS	dinI	NC_004741.1	1111895	1112140	R	residues 1 to 81 of 81 are 100.00 pct identical to residues 1 to 81 of 81 from Escherichia coli K-12 : B1061; DNA damage-inducible protein I	complement(1111895..1112140)	Shigella flexneri 2a str. 2457T	1077542
NP_836771.1	CDS	pyrC	NC_004741.1	1112214	1113260	R	catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase	complement(1112214..1113260)	Shigella flexneri 2a str. 2457T	1077543
NP_836772.1	CDS	yceB	NC_004741.1	1113366	1113926	R	residues 1 to 186 of 186 are 100.00 pct identical to residues 1 to 186 of 186 from Escherichia coli K-12 : B1063; hypothetical protein	complement(1113366..1113926)	Shigella flexneri 2a str. 2457T	1077544
NP_836773.1	CDS	grxB	NC_004741.1	1114060	1114707	R	cofactor involved in the reduction of disulfides; glutaredoxin	complement(1114060..1114707)	Shigella flexneri 2a str. 2457T	1077545
NP_836774.1	CDS	yceL	NC_004741.1	1114771	1115979	R	Confers resistance to norfloxacin and enoxacin; multidrug resistance protein MdtH	complement(1114771..1115979)	Shigella flexneri 2a str. 2457T	1077546
NP_836775.1	CDS	rimJ	NC_004741.1	1116215	1116799	D	residues 1 to 194 of 194 are 100.00 pct identical to residues 1 to 194 of 194 from Escherichia coli K-12 : B1066; required for acetylation of N-terminal alanine of 30S ribosomal subunit protein S5; ribosomal-protein-S5-alanine N-acetyltransferase	1116215..1116799	Shigella flexneri 2a str. 2457T	1077547
NP_836776.1	CDS	yceH	NC_004741.1	1116810	1117457	D	residues 1 to 215 of 215 are 98.13 pct identical to residues 1 to 215 of 215 from Escherichia coli K-12 : B1067; hypothetical protein	1116810..1117457	Shigella flexneri 2a str. 2457T	1077548
NP_836777.1	CDS	mviM	NC_004741.1	1117459	1118292	D	residues 1 to 277 of 277 are 94.58 pct identical to residues 1 to 277 of 307 from Escherichia coli K-12 : B1068; virulence factor	1117459..1118292	Shigella flexneri 2a str. 2457T	1077549
NP_836778.1	CDS	mviN	NC_004741.1	1118492	1120027	D	residues 1 to 511 of 511 are 86.88 pct identical to residues 1 to 511 of 511 from Escherichia coli K-12 : B1069; virulence factor	1118492..1120027	Shigella flexneri 2a str. 2457T	1077577
NP_836779.1	CDS	flgN	NC_004741.1	1120067	1120483	R	residues 1 to 138 of 138 are 97.82 pct identical to residues 1 to 138 of 138 from Escherichia coli K-12 : B1070; flagella synthesis protein FlgN	complement(1120067..1120483)	Shigella flexneri 2a str. 2457T	1077550
NP_836780.1	CDS	flgM	NC_004741.1	1120488	1120781	R	regulates the flagellar specific sigma28 transcription factor; anti-sigma28 factor FlgM	complement(1120488..1120781)	Shigella flexneri 2a str. 2457T	1077551
NP_836781.1	CDS	flgA	NC_004741.1	1120857	1121516	R	required for the assembly of the flagellar basal body P-ring; flagellar basal body P-ring biosynthesis protein FlgA	complement(1120857..1121516)	Shigella flexneri 2a str. 2457T	1077552
NP_836782.1	CDS	flgB	NC_004741.1	1121671	1122087	D	with FlgF and C makes up the proximal portion of the flagellar basal body rod; Vibrio parahaemolyticus protein is associated with the polar flagella; flagellar basal body rod protein FlgB	1121671..1122087	Shigella flexneri 2a str. 2457T	1077609
NP_836783.1	CDS	flgD	NC_004741.1	1122506	1123201	D	acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production; flagellar basal body rod modification protein	1122506..1123201	Shigella flexneri 2a str. 2457T	1077554
NP_836784.1	CDS	flgE	NC_004741.1	1123226	1124434	D	the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE	1123226..1124434	Shigella flexneri 2a str. 2457T	1077555
NP_836785.1	CDS	flgG	NC_004741.1	1125343	1126125	D	makes up the distal portion of the flagellar basal body rod; flagellar basal body rod protein FlgG	1125343..1126125	Shigella flexneri 2a str. 2457T	1077557
NP_836786.1	CDS	flgH	NC_004741.1	1126178	1126876	D	part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod; flagellar basal body L-ring protein	1126178..1126876	Shigella flexneri 2a str. 2457T	1077558
NP_836787.1	CDS	flgI	NC_004741.1	1126888	1127985	D	part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein	1126888..1127985	Shigella flexneri 2a str. 2457T	1077559
NP_836788.1	CDS	flgJ	NC_004741.1	1127985	1128926	D	Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space; flagellar rod assembly protein/muramidase FlgJ	1127985..1128926	Shigella flexneri 2a str. 2457T	1077560
NP_836789.2	CDS	rne	NC_004741.1	1131785	1134976	R	bifunctional ribonuclease E/endoribonuclease/RNA-binding protein/RNA degradosome binding protein; forms part of the membrane-associated degradosome complex along with PNPase, RhlB, and enolase; ribonuclease E	complement(1131785..1134976)	Shigella flexneri 2a str. 2457T	1077565
NP_836790.1	CDS	S1169	NC_004741.1	1135057	1135431	D	residues 1 to 124 of 124 are 87.09 pct identical to residues 1 to 124 of 124 from Escherichia coli K-12 : B1085; hypothetical protein	1135057..1135431	Shigella flexneri 2a str. 2457T	1077566
NP_836791.1	CDS	yceC	NC_004741.1	1135549	1136508	D	catalyzes the transformation of uracil to pseudouracil at nucleotides U955, U2504, and U2580 in 23S rRNA; 23S rRNA pseudouridylate synthase C	1135549..1136508	Shigella flexneri 2a str. 2457T	1077567
NP_836792.2	CDS	maf	NC_004741.1	1136620	1137204	R	Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein	complement(1136620..1137204)	Shigella flexneri 2a str. 2457T	1077568
NP_836793.1	CDS	yceD	NC_004741.1	1137403	1137924	D	residues 1 to 173 of 173 are 90.17 pct identical to residues 1 to 173 of 173 from Escherichia coli K-12 : B1088; hypothetical protein	1137403..1137924	Shigella flexneri 2a str. 2457T	1077591
NP_836794.1	CDS	rpmF	NC_004741.1	1137976	1138149	D	some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32	1137976..1138149	Shigella flexneri 2a str. 2457T	1077571
NP_836795.2	CDS	plsX	NC_004741.1	1138230	1139300	D	involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX	1138230..1139300	Shigella flexneri 2a str. 2457T	1080370
NP_836796.1	CDS	fabH	NC_004741.1	1139368	1140321	D	FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase	1139368..1140321	Shigella flexneri 2a str. 2457T	1077576
NP_836797.1	CDS	fabD	NC_004741.1	1140337	1141266	D	residues 1 to 309 of 309 are 93.20 pct identical to residues 1 to 309 of 309 from Escherichia coli K-12 : B1092; acyl carrier protein S-malonyltransferase	1140337..1141266	Shigella flexneri 2a str. 2457T	1080752
NP_836798.1	CDS	fabG	NC_004741.1	1141279	1142013	D	catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase	1141279..1142013	Shigella flexneri 2a str. 2457T	1077578
NP_836799.1	CDS	acpP	NC_004741.1	1142224	1142460	D	carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein	1142224..1142460	Shigella flexneri 2a str. 2457T	1077579
NP_836800.1	CDS	fabF	NC_004741.1	1142547	1143788	D	FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II	1142547..1143788	Shigella flexneri 2a str. 2457T	1078139
NP_836801.1	CDS	pabC	NC_004741.1	1143908	1144717	D	catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate; 4-amino-4-deoxychorismate lyase	1143908..1144717	Shigella flexneri 2a str. 2457T	1077580
NP_836802.1	CDS	yceG	NC_004741.1	1144720	1145742	D	residues 24 to 340 of 340 are 99.05 pct identical to residues 24 to 340 of 340 from Escherichia coli K-12 : B1097; hypothetical protein	1144720..1145742	Shigella flexneri 2a str. 2457T	1077581
NP_836803.1	CDS	tmk	NC_004741.1	1145732	1146373	D	catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase	1145732..1146373	Shigella flexneri 2a str. 2457T	1077583
NP_836804.1	CDS	holB	NC_004741.1	1146370	1147374	D	catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta'	1146370..1147374	Shigella flexneri 2a str. 2457T	1077375
NP_836805.1	CDS	ycfH	NC_004741.1	1147385	1148182	D	residues 1 to 265 of 265 are 93.58 pct identical to residues 1 to 265 of 265 from Escherichia coli K-12 : B1100; metallodependent hydrolase	1147385..1148182	Shigella flexneri 2a str. 2457T	1077584
NP_836806.1	CDS	ptsG	NC_004741.1	1148477	1149910	D	phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; glucose-specific PTS system IIBC components	1148477..1149910	Shigella flexneri 2a str. 2457T	1080692
NP_836807.1	CDS	ycfF	NC_004741.1	1152494	1152853	D	residues 1 to 119 of 119 are 100.00 pct identical to residues 1 to 119 of 119 from Escherichia coli K-12 : B1103; purine nucleoside phosphoramidase	1152494..1152853	Shigella flexneri 2a str. 2457T	1077589
NP_836808.1	CDS	ycfL	NC_004741.1	1152856	1153233	D	residues 1 to 125 of 125 are 90.39 pct identical to residues 1 to 125 of 125 from Escherichia coli K-12 : B1104; hypothetical protein	1152856..1153233	Shigella flexneri 2a str. 2457T	1078458
NP_836809.1	CDS	ycfM	NC_004741.1	1153248	1153889	D	residues 1 to 213 of 213 are 82.62 pct identical to residues 1 to 213 of 213 from Escherichia coli K-12 : B1105; hypothetical protein	1153248..1153889	Shigella flexneri 2a str. 2457T	1077590
NP_836810.1	CDS	thiK	NC_004741.1	1153870	1154694	D	catalyzes the phosphorylation of thiamine to thiamine phosphate; thiamine kinase	1153870..1154694	Shigella flexneri 2a str. 2457T	1077594
NP_836811.1	CDS	ycfO	NC_004741.1	1154705	1155730	D	hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides; beta-hexosaminidase	1154705..1155730	Shigella flexneri 2a str. 2457T	1077595
NP_836812.1	CDS	ycfP	NC_004741.1	1155753	1156295	D	residues 1 to 180 of 180 are 100.00 pct identical to residues 20 to 199 of 199 from Escherichia coli K-12 : B1108; hypothetical protein	1155753..1156295	Shigella flexneri 2a str. 2457T	1077610
NP_836813.1	CDS	ndh	NC_004741.1	1156703	1158007	D	residues 1 to 434 of 434 are 96.54 pct identical to residues 1 to 434 of 434 from Escherichia coli K-12 : B1109; respiratory NADH dehydrogenase	1156703..1158007	Shigella flexneri 2a str. 2457T	1077597
NP_836814.1	CDS	ycfJ	NC_004741.1	1158234	1158773	D	residues 1 to 179 of 179 are 89.94 pct identical to residues 1 to 179 of 179 from Escherichia coli K-12 : B1110; hypothetical protein	1158234..1158773	Shigella flexneri 2a str. 2457T	1077599
NP_836815.1	CDS	ycfQ	NC_004741.1	1158835	1159545	R	residues 1 to 236 of 236 are 99.57 pct identical to residues 1 to 236 of 236 from Escherichia coli K-12 : B1111; hypothetical protein	complement(1158835..1159545)	Shigella flexneri 2a str. 2457T	1076963
NP_836816.1	CDS	ycfR	NC_004741.1	1159752	1159964	D	residues 1 to 70 of 70 are 98.57 pct identical to residues 16 to 85 of 85 from Escherichia coli K-12 : B1112; hypothetical protein	1159752..1159964	Shigella flexneri 2a str. 2457T	1077600
NP_836817.1	CDS	ycfS	NC_004741.1	1160047	1161009	R	residues 1 to 320 of 320 are 93.12 pct identical to residues 1 to 320 of 320 from Escherichia coli K-12 : B1113; hypothetical protein	complement(1160047..1161009)	Shigella flexneri 2a str. 2457T	1080746
NP_836818.1	CDS	mfd	NC_004741.1	1161152	1164598	R	residues 1 to 1148 of 1148 are 98.25 pct identical to residues 1 to 1148 of 1148 from Escherichia coli K-12 : B1114; mutation frequency decline; transcription-repair coupling factor	complement(1161152..1164598)	Shigella flexneri 2a str. 2457T	1077601
NP_836819.1	CDS	ycfT	NC_004741.1	1164726	1165799	R	residues 1 to 357 of 357 are 90.75 pct identical to residues 1 to 357 of 357 from Escherichia coli K-12 : B1115; hypothetical protein	complement(1164726..1165799)	Shigella flexneri 2a str. 2457T	1077604
NP_836820.1	CDS	ycfU	NC_004741.1	1166061	1167260	D	part of the ATP-dependent transport system LolCDE; responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane; outer membrane-specific lipoprotein transporter subunit LolC	1166061..1167260	Shigella flexneri 2a str. 2457T	1077603
NP_836821.1	CDS	lolD	NC_004741.1	1167253	1167954	D	outer membrane specific; part of transporter complex lolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone; lipoprotein transporter ATP-binding subunit	1167253..1167954	Shigella flexneri 2a str. 2457T	1077592
NP_836822.1	CDS	ycfW	NC_004741.1	1167954	1169198	D	part of the ATP-dependent transport system LolCDE; responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane; outer membrane-specific lipoprotein transporter subunit LolE	1167954..1169198	Shigella flexneri 2a str. 2457T	1077606
NP_836823.1	CDS	ycfX	NC_004741.1	1169227	1170138	D	catalyzes the formation of N-acetyl-D-glucosamine-6-phosphate from N-acetyl-D-glucosamine; N-acetyl-D-glucosamine kinase	1169227..1170138	Shigella flexneri 2a str. 2457T	1076442
NP_836824.1	CDS	cobB	NC_004741.1	1170154	1170975	D	Modulates the activities of several enzymes which are inactive in their acetylated form; NAD-dependent deacetylase	1170154..1170975	Shigella flexneri 2a str. 2457T	1077607
NP_836825.1	CDS	potD	NC_004741.1	1171131	1172177	R	can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotD is a periplasmic component that binds the substrate; spermidine/putrescine ABC transporter substrate-binding protein	complement(1171131..1172177)	Shigella flexneri 2a str. 2457T	1080984
NP_836826.1	CDS	potC	NC_004741.1	1172174	1172968	R	can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotC is a membrane component; spermidine/putrescine ABC transporter	complement(1172174..1172968)	Shigella flexneri 2a str. 2457T	1077608
NP_836827.2	CDS	potB	NC_004741.1	1172965	1173822	R	can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotB is a membrane component; spermidine/putrescine ABC transporter	complement(1172965..1173822)	Shigella flexneri 2a str. 2457T	1077602
NP_836828.1	CDS	potA	NC_004741.1	1173806	1174942	R	functions together with PotBCD (A2BCD) in ATP-dependent polyamine transport; PotA is the membrane-associated ATPase; putrescine/spermidine ABC transporter ATPase	complement(1173806..1174942)	Shigella flexneri 2a str. 2457T	1077612
NP_836829.1	CDS	pepT	NC_004741.1	1175192	1176418	D	catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T	1175192..1176418	Shigella flexneri 2a str. 2457T	1077613
NP_836830.1	CDS	ycfD	NC_004741.1	1176467	1177597	R	residues 1 to 376 of 376 are 95.21 pct identical to residues 1 to 376 of 376 from Escherichia coli K-12 : B1128; hypothetical protein	complement(1176467..1177597)	Shigella flexneri 2a str. 2457T	1077598
NP_836831.1	CDS	S1211	NC_004741.1	1177837	1179066	D	residues 1 to 409 of 409 are 100.00 pct identical to residues 8 to 416 of 416 from GenPept : >gb|AAG55933.1|AE005327_3 (AE005327)  integrase of prophage CP-933C [Escherichia coli O157:H7 EDL933]; integrase of prophage CP-933C	1177837..1179066	Shigella flexneri 2a str. 2457T	1077614
NP_836832.1	CDS	S1212	NC_004741.1	1180340	1180642	D	residues 35 to 99 of 100 are 95.38 pct identical to residues 1 to 65 of 65 from GenPept : >dbj|BAB35000.1| (AP002555) Icd-like protein [Escherichia coli O157:H7]; hypothetical protein	1180340..1180642	Shigella flexneri 2a str. 2457T	1078340
NP_836833.1	CDS	S1214	NC_004741.1	1181307	1181606	D	residues 1 to 99 of 99 are 87.87 pct identical to residues 1 to 99 of 99 from GenPept : >dbj|BAB35004.1| (AP002555) hypothetical protein [Escherichia coli O157:H7]; hypothetical protein	1181307..1181606	Shigella flexneri 2a str. 2457T	1077615
NP_836834.1	CDS	S1215	NC_004741.1	1181603	1183351	D	residues 142 to 559 of 582 are 49.28 pct identical to residues 309 to 725 of 763 from GenPept : >emb|CAC89726.1| (AJ414145)  primase [Yersinia pestis]; bacteriophage P4 DNA primase	1181603..1183351	Shigella flexneri 2a str. 2457T	1077616
NP_836835.1	CDS	S1216	NC_004741.1	1183718	1183918	D	residues 1 to 66 of 66 are 71.21 pct identical to residues 18 to 83 of 83 from GenPept : >gb|AAG55941.1|AE005327_11 (AE005327) unknown protein encoded by prophage CP-933C [Escherichia coli O157:H7 EDL933]; hypothetical protein	1183718..1183918	Shigella flexneri 2a str. 2457T	1077617
NP_836836.1	CDS	S1217	NC_004741.1	1183915	1184220	D	no significant similarities; hypothetical protein	1183915..1184220	Shigella flexneri 2a str. 2457T	1077618
NP_836837.1	CDS	S1218	NC_004741.1	1184230	1184391	D	no significant similarities; hypothetical protein	1184230..1184391	Shigella flexneri 2a str. 2457T	1077619
NP_836838.1	CDS	S1219	NC_004741.1	1184533	1184757	D	residues 1 to 74 of 74 are 94.59 pct identical to residues 27 to 100 of 100 from GenPept : >gb|AAG55943.1|AE005328_1 (AE005328) unknown protein encoded by prophage CP-933C [Escherichia coli O157:H7 EDL933]; hypothetical protein	1184533..1184757	Shigella flexneri 2a str. 2457T	1077620
NP_836839.1	CDS	S1222	NC_004741.1	1186255	1186827	D	residues 1 to 190 of 190 are 97.89 pct identical to residues 1 to 190 of 190 from GenPept : >gb|AAG55945.1|AE005328_3 (AE005328)  head maturation protease of prophage CP-933C [Escherichia coli O157:H7 EDL933]; head maturation protease of prophage CP-933C	1186255..1186827	Shigella flexneri 2a str. 2457T	1077622
NP_836840.1	CDS	S1223	NC_004741.1	1186865	1187992	D	residues 1 to 375 of 375 are 97.60 pct identical to residues 13 to 387 of 403 from GenPept : >dbj|BAB35015.1| (AP002555)  head portal protein [Escherichia coli O157:H7]; head portal protein	1186865..1187992	Shigella flexneri 2a str. 2457T	1077623
NP_836841.1	CDS	S1224	NC_004741.1	1188037	1188375	D	residues 1 to 112 of 112 are 96.42 pct identical to residues 1 to 112 of 112 from GenPept : >dbj|BAB35016.1| (AP002555)  head-tail adaptor [Escherichia coli O157:H7]; head-tail adaptor	1188037..1188375	Shigella flexneri 2a str. 2457T	1077624
NP_836842.1	CDS	S1225	NC_004741.1	1188372	1188668	D	residues 1 to 98 of 98 are 96.93 pct identical to residues 1 to 98 of 98 from GenPept : >gb|AAG55948.1|AE005328_6 (AE005328) unknown protein encoded by prophage CP-933C [Escherichia coli O157:H7 EDL933]; hypothetical protein	1188372..1188668	Shigella flexneri 2a str. 2457T	1077956
NP_836843.1	CDS	S1226	NC_004741.1	1188896	1189108	D	residues 1 to 70 of 70 are 71.42 pct identical to residues 60 to 129 of 129 from GenPept : >gb|AAG55949.1|AE005328_7 (AE005328)  holin protein of prophage CP-933C [Escherichia coli O157:H7 EDL933]; holin protein of prophage CP-933C	1188896..1189108	Shigella flexneri 2a str. 2457T	1077627
NP_836844.1	CDS	S1227	NC_004741.1	1189345	1189656	D	residues 1 to 91 of 103 are 98.90 pct identical to residues 16 to 106 of 118 from GenPept : >gb|AAG55950.1|AE005328_8 (AE005328) unknown protein encoded by prophage CP-933C [Escherichia coli O157:H7 EDL933]; hypothetical protein	1189345..1189656	Shigella flexneri 2a str. 2457T	1077628
NP_836845.1	CDS	S1228	NC_004741.1	1189823	1191301	D	residues 1 to 492 of 492 are 91.46 pct identical to residues 18 to 509 of 509 from GenPept : >gb|AAG55951.1|AE005328_9 (AE005328)  terminase of prophage CP-933C [Escherichia coli O157:H7 EDL933]; terminase of prophage CP-933C	1189823..1191301	Shigella flexneri 2a str. 2457T	1077226
NP_836846.1	CDS	S1229	NC_004741.1	1191315	1191596	D	residues 1 to 93 of 93 are 93.54 pct identical to residues 1 to 93 of 93 from GenPept : >gb|AAG55952.1|AE005328_10 (AE005328) unknown protein encoded by prophage CP-933C [Escherichia coli O157:H7 EDL933]; hypothetical protein	1191315..1191596	Shigella flexneri 2a str. 2457T	1077629
NP_836847.1	CDS	phoQ	NC_004741.1	1192393	1193853	R	residues 1 to 486 of 486 are 93.00 pct identical to residues 1 to 486 of 486 from Escherichia coli K-12 : B1129; sensor protein PhoQ	complement(1192393..1193853)	Shigella flexneri 2a str. 2457T	1080919
NP_836848.1	CDS	phoP	NC_004741.1	1193853	1194524	R	response regulator in two-component regulatory system with PhoQ; involved in magnesium starvation and stress; DNA-binding transcriptional regulator PhoP	complement(1193853..1194524)	Shigella flexneri 2a str. 2457T	1077630
NP_836849.1	CDS	purB	NC_004741.1	1194693	1196063	R	Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase	complement(1194693..1196063)	Shigella flexneri 2a str. 2457T	1077636
NP_836850.1	CDS	ycfC	NC_004741.1	1196067	1196708	R	HflD; UPF0274; in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein; in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis; hypothetical protein	complement(1196067..1196708)	Shigella flexneri 2a str. 2457T	1077631
NP_836851.2	CDS	mnmA	NC_004741.1	1196744	1197850	R	catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA	complement(1196744..1197850)	Shigella flexneri 2a str. 2457T	1077645
NP_836852.1	CDS	S1236	NC_004741.1	1197904	1198365	R	residues 1 to 153 of 153 are 100.00 pct identical to residues 1 to 153 of 153 from Escherichia coli K-12 : B1134; phosphohydrolase	complement(1197904..1198365)	Shigella flexneri 2a str. 2457T	1077632
NP_836853.1	CDS	ymfC	NC_004741.1	1198375	1198998	R	catalyzes the formation of pseudouridine from uracil-2457 in 23S ribosomal RNA; 23S rRNA pseudouridine synthase E	complement(1198375..1198998)	Shigella flexneri 2a str. 2457T	1077658
NP_836854.1	CDS	icdA	NC_004741.1	1199200	1200450	D	Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase	1199200..1200450	Shigella flexneri 2a str. 2457T	1077633
NP_836855.1	CDS	S1239	NC_004741.1	1200557	1201060	R	residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAL72450.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS1 orfB	complement(1200557..1201060)	Shigella flexneri 2a str. 2457T	1079276
NP_836856.1	CDS	S1240	NC_004741.1	1200979	1201254	R	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(1200979..1201254)	Shigella flexneri 2a str. 2457T	1077637
NP_836857.1	CDS	S1241	NC_004741.1	1201348	1202871	D	residues 1 to 507 of 507 are 98.61 pct identical to residues 1 to 507 of 507 from NRprotein_Feb2003 : >sp|P75995|YCGG_ECOLI Hypothetical protein ycgG; hypothetical protein	1201348..1202871	Shigella flexneri 2a str. 2457T	1079348
NP_836858.1	CDS	S1242	NC_004741.1	1203948	1206269	D	residues 431 to 749 of 773 are 96.86 pct identical to residues 5 to 323 of 338 from NRprotein_Feb2003 : >ref|NP_415688.1|  part of  ATP-binding component of a transport system [Escherichia coli K12] pir||G64862 hypothetical protein b1170 - Escherichia coli (strain K-12) gb|AAC74254.1|  part of  ATP-binding component of a transport system [Escherichia coli K12]; hypothetical protein	1203948..1206269	Shigella flexneri 2a str. 2457T	1077638
NP_836859.1	CDS	S1244	NC_004741.1	1206326	1206661	R	residues 1 to 111 of 111 are 100.00 pct identical to residues 1 to 111 of 111 from Escherichia coli K-12 : B1171; hypothetical protein	complement(1206326..1206661)	Shigella flexneri 2a str. 2457T	1080946
NP_836860.1	CDS	S1245	NC_004741.1	1206665	1206949	R	residues 1 to 94 of 94 are 35.10 pct identical to residues 1 to 94 of 94 from Escherichia coli K-12 : B1172; hypothetical protein	complement(1206665..1206949)	Shigella flexneri 2a str. 2457T	1077639
NP_836861.1	CDS	S1246	NC_004741.1	1207717	1207929	D	residues 1 to 70 of 70 are 94.28 pct identical to residues 1 to 70 of 70 from Escherichia coli K-12 : B1173; hypothetical protein	1207717..1207929	Shigella flexneri 2a str. 2457T	1080909
NP_836862.1	CDS	minE	NC_004741.1	1208301	1208567	R	works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; cell division topological specificity factor MinE	complement(1208301..1208567)	Shigella flexneri 2a str. 2457T	1077640
NP_836863.1	CDS	minD	NC_004741.1	1208571	1209383	R	ATPase; with MinC inhibits cell division by blocking formation of the polar Z ring septums; cell division inhibitor MinD	complement(1208571..1209383)	Shigella flexneri 2a str. 2457T	1077641
NP_836864.1	CDS	minC	NC_004741.1	1209407	1210102	R	blocks the formation of polar Z-ring septums; septum formation inhibitor	complement(1209407..1210102)	Shigella flexneri 2a str. 2457T	1077642
NP_836865.2	CDS	S1251	NC_004741.1	1210825	1211730	R	IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats; insertion element IS2 transposase InsD	complement(1210825..1211730)	Shigella flexneri 2a str. 2457T	1077644
NP_836866.1	CDS	S1253	NC_004741.1	1212776	1213075	D	residues 1 to 99 of 99 are 100.00 pct identical to residues 1 to 99 of 99 from GenPept : >gb|AAL57580.1|AF453442_9 (AF453442) transposase 2 [Escherichia coli]; IS3 orfA	1212776..1213075	Shigella flexneri 2a str. 2457T	1077647
NP_836867.1	CDS	S1254	NC_004741.1	1213072	1213926	D	residues 1 to 284 of 284 are 100.00 pct identical to residues 1 to 284 of 288 from GenPept : >gb|AAL57581.1|AF453442_10 (AF453442) transposase 1 [Escherichia coli]; IS3 orfB	1213072..1213926	Shigella flexneri 2a str. 2457T	1077646
NP_836868.1	CDS	ycgL	NC_004741.1	1214284	1214610	D	residues 1 to 108 of 108 are 98.14 pct identical to residues 1 to 108 of 108 from Escherichia coli K-12 : B1179; hypothetical protein	1214284..1214610	Shigella flexneri 2a str. 2457T	1077648
NP_836869.1	CDS	S1257	NC_004741.1	1214682	1215341	D	residues 1 to 219 of 219 are 99.08 pct identical to residues 1 to 219 of 219 from Escherichia coli K-12 : B1180; hypothetical protein	1214682..1215341	Shigella flexneri 2a str. 2457T	1077418
NP_836870.2	CDS	ycgN	NC_004741.1	1215433	1215879	D	residues 1 to 153 of 153 are 100.00 pct identical to residues 6 to 158 of 158 from Escherichia coli K-12 : B1181; hypothetical protein	1215433..1215879	Shigella flexneri 2a str. 2457T	1077650
NP_836871.1	CDS	umuD	NC_004741.1	1217359	1217778	D	binds with UmuC protein to form functional DNA pol V (UmuD'2UmuC); involved in translesion polymerization; DNA polymerase V subunit UmuD	1217359..1217778	Shigella flexneri 2a str. 2457T	1077651
NP_836872.1	CDS	umuC	NC_004741.1	1217778	1219046	D	binds processed UmuD protein to form functional DNA pol V (UmuD'2UmuC); involved in translesion polymerization; DNA polymerase V subunit UmuC	1217778..1219046	Shigella flexneri 2a str. 2457T	1080938
NP_836873.1	CDS	dsbB	NC_004741.1	1219092	1219622	R	disulfide oxidoreductase; integral membrane protein; required for perioplasmic disulfide bond formation; oxidizes DsbA protein; disulfide bond formation protein B	complement(1219092..1219622)	Shigella flexneri 2a str. 2457T	1077653
NP_836874.1	CDS	nhaB	NC_004741.1	1219768	1221309	R	involved in regulation of intracellular pH under alkaline conditions; sodium/proton antiporter	complement(1219768..1221309)	Shigella flexneri 2a str. 2457T	1079461
NP_836875.1	CDS	fadR	NC_004741.1	1221530	1222249	D	Multifunctional regulator of fatty acid metabolism; fatty acid metabolism regulator	1221530..1222249	Shigella flexneri 2a str. 2457T	1077654
NP_836876.1	CDS	ycgB	NC_004741.1	1222301	1223833	R	residues 1 to 510 of 510 are 99.60 pct identical to residues 1 to 510 of 510 from Escherichia coli K-12 : B1188; SpoVR family protein	complement(1222301..1223833)	Shigella flexneri 2a str. 2457T	1077656
NP_836877.1	CDS	dadA	NC_004741.1	1224163	1225461	D	catalyzes the oxidative deamination of D-amino acids; D-amino acid dehydrogenase small subunit	1224163..1225461	Shigella flexneri 2a str. 2457T	1076627
NP_836878.1	CDS	dadX	NC_004741.1	1225471	1226541	D	catabolic enzyme, converts L-alanine to D-alanine which is then oxidized to pyruvate by dadA; alanine racemase	1225471..1226541	Shigella flexneri 2a str. 2457T	1076629
NP_836879.1	CDS	ipaH_3	NC_004741.1	1227396	1228004	R	residues 116 to 190 of 202 are 42.66 pct identical to residues 42 to 114 of 565 from GenPept : >gb|AAL72346.1| (AF386526) IpaH7.8 [Shigella flexneri 2a]; invasion plasmid antigen fragment	complement(1227396..1228004)	Shigella flexneri 2a str. 2457T	1077657
NP_836880.2	CDS	S1269	NC_004741.1	1228731	1230467	R	the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli; potassium/proton antiporter	complement(1228731..1230467)	Shigella flexneri 2a str. 2457T	1077669
NP_836881.1	CDS	ldcA	NC_004741.1	1230562	1231476	R	catalyzes the release of D-alanine from L-alanyl-D-glutamyl-meso-diaminopimelyl-D-alanine; L,D-carboxypeptidase A	complement(1230562..1231476)	Shigella flexneri 2a str. 2457T	1077659
NP_836882.1	CDS	mltE	NC_004741.1	1231462	1232187	D	residues 1 to 241 of 241 are 99.58 pct identical to residues 1 to 241 of 241 from Escherichia coli K-12 : B1193; murein transglycosylase E	1231462..1232187	Shigella flexneri 2a str. 2457T	1080910
NP_836883.1	CDS	ycgR	NC_004741.1	1232189	1232923	R	residues 1 to 244 of 244 are 99.18 pct identical to residues 1 to 244 of 244 from Escherichia coli K-12 : B1194; hypothetical protein	complement(1232189..1232923)	Shigella flexneri 2a str. 2457T	1077660
NP_836884.1	CDS	ymgE	NC_004741.1	1233124	1233378	D	residues 1 to 84 of 84 are 80.95 pct identical to residues 1 to 84 of 84 from Escherichia coli K-12 : B1195; hypothetical protein	1233124..1233378	Shigella flexneri 2a str. 2457T	1077696
NP_836885.1	CDS	modD	NC_004741.1	1235408	1236262	R	involved in molybdenum transport; molybdenum transport protein ModD	complement(1235408..1236262)	Shigella flexneri 2a str. 2457T	1077649
NP_836886.1	CDS	S1277	NC_004741.1	1236262	1237071	R	residues 1 to 269 of 269 are 94.79 pct identical to residues 1 to 269 of 270 from GenPept : >gb|AAC61711.1| (AF081283) Orf2 [Escherichia coli]; hypothetical protein	complement(1236262..1237071)	Shigella flexneri 2a str. 2457T	1077663
NP_836887.1	CDS	S1278	NC_004741.1	1237081	1237839	R	residues 1 to 251 of 252 are 98.40 pct identical to residues 1 to 251 of 252 from GenPept : >gb|AAG56052.1|AE005337_2 (AE005337)  iron compound ABC transporter ATP-binding protein [Escherichia coli O157:H7 EDL933]; ferric enterobactin transport ATP-binding protein	complement(1237081..1237839)	Shigella flexneri 2a str. 2457T	1079462
NP_836888.1	CDS	S1279	NC_004741.1	1237836	1238816	R	residues 1 to 314 of 326 are 87.89 pct identical to residues 1 to 314 of 326 from GenPept : >gb|AAG56053.1|AE005337_3 (AE005337)  iron compound ABC transporter permease [Escherichia coli O157:H7 EDL933]; iron compound ABC transporter permease	complement(1237836..1238816)	Shigella flexneri 2a str. 2457T	1077664
NP_836889.1	CDS	S1280	NC_004741.1	1238816	1239838	R	residues 1 to 340 of 340 are 87.05 pct identical to residues 1 to 340 of 340 from GenPept : >gb|AAG56054.1|AE005337_4 (AE005337) Z1966 gene product [Escherichia coli O157:H7 EDL933]; ABC transporter ATP-binding protein	complement(1238816..1239838)	Shigella flexneri 2a str. 2457T	1077718
NP_836890.1	CDS	S1281	NC_004741.1	1240551	1241054	R	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri]; IS1 orfB	complement(1240551..1241054)	Shigella flexneri 2a str. 2457T	1078216
NP_836891.1	CDS	S1282	NC_004741.1	1240973	1241248	R	residues 1 to 91 of 91 are 98.90 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(1240973..1241248)	Shigella flexneri 2a str. 2457T	1077665
NP_836892.1	CDS	treA	NC_004741.1	1242200	1243897	R	periplasmic; catalyzes the hydrolysis of trehalose to glucose which can then be imported into the cell; trehalase	complement(1242200..1243897)	Shigella flexneri 2a str. 2457T	1077671
NP_836893.1	CDS	ycgC	NC_004741.1	1244217	1245635	R	phosphotransferaese subunit; phosphorylates dihydroxyacetone; dihydroxyacetone kinase subunit M	complement(1244217..1245635)	Shigella flexneri 2a str. 2457T	1079261
NP_836894.1	CDS	S1286	NC_004741.1	1245646	1246278	R	with DhaK and DhaM catalyzes the phosphorylation of dihydroxyacetone; dihydroxyacetone kinase ADP-binding subunit	complement(1245646..1246278)	Shigella flexneri 2a str. 2457T	1077672
NP_836895.1	CDS	S1287	NC_004741.1	1246289	1247389	R	with DhaL and DhaM forms dihydroxyacetone kinase, which is responsible for phosphorylating dihydroxyacetone; DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase; dihydroxyacetone kinase subunit DhaK	complement(1246289..1247389)	Shigella flexneri 2a str. 2457T	1078397
NP_836896.1	CDS	S1288	NC_004741.1	1247578	1249506	D	Positively regulates the dhaKLM operon from a sigma-70 promoter; DNA-binding transcriptional regulator DhaR	1247578..1249506	Shigella flexneri 2a str. 2457T	1077673
NP_836897.1	CDS	S1289	NC_004741.1	1249606	1252473	R	residues 1 to 955 of 955 are 88.58 pct identical to residues 1 to 955 of 955 from Escherichia coli K-12 : B1202; adhesion and penetration protein	complement(1249606..1252473)	Shigella flexneri 2a str. 2457T	1077662
NP_836898.1	CDS	ychF	NC_004741.1	1253317	1254408	R	translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD	complement(1253317..1254408)	Shigella flexneri 2a str. 2457T	1077675
NP_836899.1	CDS	pth	NC_004741.1	1254525	1255109	R	Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase	complement(1254525..1255109)	Shigella flexneri 2a str. 2457T	1077683
NP_836900.1	CDS	ychH	NC_004741.1	1255387	1255665	D	YchH; transcription activated by CRP (cyclic AMP receptor protein), a global transcription factor involved in regulation of metabolism in enteric bacteria; ychH presents a class II promoter to bind CRP; unknown function; hypothetical protein	1255387..1255665	Shigella flexneri 2a str. 2457T	1077670
NP_836901.1	CDS	ychM	NC_004741.1	1255720	1257372	R	role in sulfate transport across the inner membrane; member of the SulP family of sulfate transporters; seems to mediate transport via sulfate/proton symport; sulfate transporter YchM	complement(1255720..1257372)	Shigella flexneri 2a str. 2457T	1077676
NP_836902.1	CDS	prsA	NC_004741.1	1257524	1258471	R	catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase	complement(1257524..1258471)	Shigella flexneri 2a str. 2457T	1077605
NP_836903.1	CDS	ipk	NC_004741.1	1258622	1259473	R	An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase	complement(1258622..1259473)	Shigella flexneri 2a str. 2457T	1077678
NP_836904.1	CDS	lolB	NC_004741.1	1259473	1260096	R	Incorporates lipoproteins in the outer membrane after they are released by the LolA protein; outer membrane lipoprotein LolB	complement(1259473..1260096)	Shigella flexneri 2a str. 2457T	1076727
NP_836905.1	CDS	hemA	NC_004741.1	1260310	1261566	D	catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase	1260310..1261566	Shigella flexneri 2a str. 2457T	1077679
NP_836906.1	CDS	prfA	NC_004741.1	1261608	1262690	D	recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1	1261608..1262690	Shigella flexneri 2a str. 2457T	1079483
NP_836907.1	CDS	hemK	NC_004741.1	1262690	1263523	D	HemK; PrmC; transfers a methyl group from S-adenosylmethionine to amide nitrogen of specific glutamine residues in protein chain release factors PrfA and PrfB; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase	1262690..1263523	Shigella flexneri 2a str. 2457T	1077680
NP_836908.1	CDS	S1300	NC_004741.1	1263520	1263912	D	residues 1 to 130 of 130 are 99.23 pct identical to residues 1 to 130 of 130 from Escherichia coli K-12 : B1213; transcriptional regulator	1263520..1263912	Shigella flexneri 2a str. 2457T	1077708
NP_836909.1	CDS	ychA	NC_004741.1	1263916	1264725	D	residues 1 to 269 of 269 are 92.93 pct identical to residues 1 to 269 of 269 from Escherichia coli K-12 : B1214; transcriptional regulator	1263916..1264725	Shigella flexneri 2a str. 2457T	1077681
NP_836910.1	CDS	kdsA	NC_004741.1	1264761	1265615	D	catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase	1264761..1265615	Shigella flexneri 2a str. 2457T	1077667
NP_836911.1	CDS	chaA	NC_004741.1	1266276	1267376	R	residues 1 to 366 of 366 are 77.86 pct identical to residues 1 to 366 of 366 from Escherichia coli K-12 : B1216; calcium/sodium:proton antiporter	complement(1266276..1267376)	Shigella flexneri 2a str. 2457T	1077684
NP_836912.1	CDS	chaB	NC_004741.1	1267646	1267876	D	in Escherichia coli this protein ly regulates the sodium/proton (also pH-independent calcium/proton) antiporter chaA; has weak affinity for calcium and magnesium ions; cation transport regulator	1267646..1267876	Shigella flexneri 2a str. 2457T	1080391
NP_836913.1	CDS	chaC	NC_004741.1	1268013	1268729	D	residues 1 to 238 of 238 are 94.53 pct identical to residues 1 to 238 of 238 from Escherichia coli K-12 : B1218; cation transport regulator	1268013..1268729	Shigella flexneri 2a str. 2457T	1078215
NP_836914.1	CDS	ychN	NC_004741.1	1268773	1269126	R	residues 1 to 117 of 117 are 100.00 pct identical to residues 1 to 117 of 117 from Escherichia coli K-12 : B1219; hypothetical protein	complement(1268773..1269126)	Shigella flexneri 2a str. 2457T	1077685
NP_836915.1	CDS	ychP	NC_004741.1	1269452	1270705	D	residues 1 to 417 of 417 are 95.68 pct identical to residues 1 to 417 of 417 from Escherichia coli K-12 : B1220; hypothetical protein	1269452..1270705	Shigella flexneri 2a str. 2457T	1077677
NP_836916.1	CDS	narL	NC_004741.1	1270706	1271356	R	two-component response regulator NarL; phosphorylated by NarQ; activates transcription of nitrate and nitrite reductase genes and represses transcription of fumarate reductase; transcriptional regulator NarL	complement(1270706..1271356)	Shigella flexneri 2a str. 2457T	1077686
NP_836917.1	CDS	narX	NC_004741.1	1271349	1273145	R	residues 1 to 598 of 598 are 98.32 pct identical to residues 1 to 598 of 598 from Escherichia coli K-12 : B1222; nitrate/nitrite sensor protein NarX	complement(1271349..1273145)	Shigella flexneri 2a str. 2457T	1077689
NP_836918.1	CDS	narK	NC_004741.1	1273484	1274875	D	residues 1 to 463 of 463 are 80.99 pct identical to residues 1 to 463 of 463 from Escherichia coli K-12 : B1223; nitrate transport protein nark	1273484..1274875	Shigella flexneri 2a str. 2457T	1077701
NP_836919.1	CDS	narG	NC_004741.1	1275268	1279011	D	residues 1 to 1247 of 1247 are 99.83 pct identical to residues 1 to 1247 of 1247 from Escherichia coli K-12 : B1224; nitrate reductase 1 alpha subunit	1275268..1279011	Shigella flexneri 2a str. 2457T	1077690
NP_836920.1	CDS	narH	NC_004741.1	1279008	1280546	D	residues 1 to 512 of 512 are 100.00 pct identical to residues 1 to 512 of 512 from Escherichia coli K-12 : B1225; nitrate reductase 1, beta subunit	1279008..1280546	Shigella flexneri 2a str. 2457T	1077691
NP_836921.1	CDS	narJ	NC_004741.1	1280543	1281253	D	residues 1 to 236 of 236 are 97.88 pct identical to residues 1 to 236 of 236 from Escherichia coli K-12 : B1226; nitrate reductase 1, delta subunit	1280543..1281253	Shigella flexneri 2a str. 2457T	1076618
NP_836922.1	CDS	narI	NC_004741.1	1281253	1281930	D	residues 1 to 225 of 225 are 93.77 pct identical to residues 1 to 225 of 225 from Escherichia coli K-12 : B1227; nitrate reductase 1, cytochrome b(NR), gamma subunit	1281253..1281930	Shigella flexneri 2a str. 2457T	1077693
NP_836923.1	CDS	purU	NC_004741.1	1282714	1283556	R	produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase	complement(1282714..1283556)	Shigella flexneri 2a str. 2457T	1079475
NP_836924.2	CDS	ychJ	NC_004741.1	1283606	1284064	R	residues 1 to 104 of 119 are 99.03 pct identical to residues 34 to 137 of 152 from Escherichia coli K-12 : B1233; hypothetical protein	complement(1283606..1284064)	Shigella flexneri 2a str. 2457T	1077695
NP_836925.1	CDS	ychK	NC_004741.1	1284177	1285082	D	residues 1 to 301 of 301 are 96.01 pct identical to residues 14 to 314 of 314 from Escherichia coli K-12 : B1234; hypothetical protein	1284177..1285082	Shigella flexneri 2a str. 2457T	1077687
NP_836926.1	CDS	hnr	NC_004741.1	1285174	1286187	D	residues 1 to 337 of 337 are 92.28 pct identical to residues 1 to 337 of 337 from Escherichia coli K-12 : B1235; response regulator of RpoS	1285174..1286187	Shigella flexneri 2a str. 2457T	1077698
NP_836927.1	CDS	galU	NC_004741.1	1286389	1287297	D	together with GalF subunit composes the UTP--glucose-1-phosphate uridylyltransferase, an enzyme that catalyzes the formation of UDP-glucose from UTP and alpha-D-glucose 1-phosphate; regulates cellular levels of UDP-glucose; UTP--glucose-1-phosphate uridylyltransferase subunit GalU	1286389..1287297	Shigella flexneri 2a str. 2457T	1077674
NP_836928.1	CDS	hns	NC_004741.1	1287441	1287854	R	residues 1 to 137 of 137 are 72.99 pct identical to residues 1 to 137 of 137 from Escherichia coli K-12 : B1237; global DNA-binding transcriptional dual regulator H-NS	complement(1287441..1287854)	Shigella flexneri 2a str. 2457T	1077699
NP_836929.1	CDS	tdk	NC_004741.1	1288459	1289076	D	catalyzes the formation of thymidine 5'-phosphate from thymidine; thymidine kinase	1288459..1289076	Shigella flexneri 2a str. 2457T	1077655
NP_836930.1	CDS	S1325	NC_004741.1	1289362	1290690	R	residues 1 to 442 of 442 are 99.32 pct identical to residues 7 to 448 of 448 from GenPept : >gb|AAK18333.1|AF348706_22 (AF348706) IS4 orf [Shigella flexneri]; IS4 orf	complement(1289362..1290690)	Shigella flexneri 2a str. 2457T	1077736
NP_836931.1	CDS	adhE	NC_004741.1	1290816	1293491	R	residues 1 to 872 of 891 are 91.74 pct identical to residues 1 to 872 of 891 from Escherichia coli K-12 : B1241; bifunctional acetaldehyde-CoA/alcohol dehydrogenase	complement(1290816..1293491)	Shigella flexneri 2a str. 2457T	1077703
NP_836932.1	CDS	ychE	NC_004741.1	1293968	1294615	D	residues 1 to 215 of 215 are 99.53 pct identical to residues 1 to 215 of 215 from Escherichia coli K-12 : B1242; hypothetical protein	1293968..1294615	Shigella flexneri 2a str. 2457T	1077995
NP_836933.1	CDS	S1328	NC_004741.1	1294982	1295485	R	residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri]; IS1 orfB	complement(1294982..1295485)	Shigella flexneri 2a str. 2457T	1077704
NP_836934.1	CDS	S1329	NC_004741.1	1295404	1295679	R	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(1295404..1295679)	Shigella flexneri 2a str. 2457T	1077705
NP_836935.1	CDS	oppA	NC_004741.1	1296130	1297761	D	residues 1 to 543 of 543 are 95.76 pct identical to residues 1 to 543 of 543 from Escherichia coli K-12 : B1243; periplasmic oligopeptide binding protein	1296130..1297761	Shigella flexneri 2a str. 2457T	1077724
NP_836936.1	CDS	oppB	NC_004741.1	1297847	1298767	D	residues 1 to 306 of 306 are 100.00 pct identical to residues 1 to 306 of 306 from Escherichia coli K-12 : B1244; oligopeptide transporter permease	1297847..1298767	Shigella flexneri 2a str. 2457T	1077706
NP_836937.1	CDS	oppC	NC_004741.1	1298782	1299690	D	residues 1 to 302 of 302 are 81.45 pct identical to residues 1 to 302 of 302 from Escherichia coli K-12 : B1245; oligopeptide transport permease	1298782..1299690	Shigella flexneri 2a str. 2457T	1080986
NP_836938.1	CDS	oppD	NC_004741.1	1299702	1300715	D	residues 1 to 337 of 337 are 99.10 pct identical to residues 1 to 337 of 337 from Escherichia coli K-12 : B1246; oligopeptide transporter ATP-binding component	1299702..1300715	Shigella flexneri 2a str. 2457T	1077707
NP_836939.1	CDS	oppF	NC_004741.1	1300712	1301716	D	residues 1 to 334 of 334 are 97.90 pct identical to residues 1 to 334 of 334 from Escherichia coli K-12 : B1247; ATP-binding protein of oligopeptide ABC transport system	1300712..1301716	Shigella flexneri 2a str. 2457T	1077697
NP_836940.2	CDS	S1335	NC_004741.1	1301769	1302098	R	highly acidic protein; the structure of the Haemophilus influenzae protein shows similarity to uracil DNA glycosylase inhibitor (Ugi); binds heat-unstable protein (HU-alpha) which is a histone-like protein; dsDNA-mimic protein	complement(1301769..1302098)	Shigella flexneri 2a str. 2457T	1077710
NP_836941.1	CDS	cls	NC_004741.1	1302133	1303593	R	catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol); cardiolipin synthetase	complement(1302133..1303593)	Shigella flexneri 2a str. 2457T	1077634
NP_836942.1	CDS	kch	NC_004741.1	1303964	1305217	R	residues 1 to 417 of 417 are 95.44 pct identical to residues 1 to 417 of 417 from Escherichia coli K-12 : B1250; voltage-gated potassium channel	complement(1303964..1305217)	Shigella flexneri 2a str. 2457T	1077711
NP_836943.1	CDS	S1338	NC_004741.1	1305580	1305882	D	residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAL72452.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS600 orfA	1305580..1305882	Shigella flexneri 2a str. 2457T	1077712
NP_836944.1	CDS	S1339	NC_004741.1	1306023	1306709	D	residues 1 to 228 of 228 are 86.49 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAK18576.1|AF348706_265 (AF348706) IS600 orfB [Shigella flexneri]; IS600 orfB	1306023..1306709	Shigella flexneri 2a str. 2457T	1077700
NP_836945.2	CDS	yciI	NC_004741.1	1306757	1307053	R	unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity; YciI-like protein	complement(1306757..1307053)	Shigella flexneri 2a str. 2457T	1077720
NP_836946.1	CDS	tonB	NC_004741.1	1307268	1307996	D	membrane spanning protein in TonB-ExbB-ExbD complex; transduces proton motive force of the cytoplasmic membrane to outer membrane transporters; involved in the transport of ron-siderophore complexes, vitamin B12 and colicins; transporter	1307268..1307996	Shigella flexneri 2a str. 2457T	1077715
NP_836947.1	CDS	yciA	NC_004741.1	1308036	1308434	R	YciA; hydrolase that catalyzes the hydrolysis of the thioester bond in palmitoyl-CoA and malonyl-CoA; member of the the acyl coenzyme A hydrolase family of proteins; acyl-CoA thioester hydrolase	complement(1308036..1308434)	Shigella flexneri 2a str. 2457T	1080851
NP_836948.1	CDS	yciB	NC_004741.1	1308539	1309078	R	Involved in cell division; probably involved in intracellular septation; intracellular septation protein A	complement(1308539..1309078)	Shigella flexneri 2a str. 2457T	1077719
NP_836949.1	CDS	yciC	NC_004741.1	1309108	1309851	R	residues 1 to 247 of 247 are 80.97 pct identical to residues 1 to 247 of 247 from Escherichia coli K-12 : B1255; hypothetical protein	complement(1309108..1309851)	Shigella flexneri 2a str. 2457T	1077713
NP_836950.1	CDS	yciD	NC_004741.1	1310208	1310846	D	receptor for colicin S4; outer membrane protein W	1310208..1310846	Shigella flexneri 2a str. 2457T	1077721
NP_836951.1	CDS	yciE	NC_004741.1	1310906	1311412	R	residues 1 to 168 of 168 are 97.02 pct identical to residues 1 to 168 of 168 from Escherichia coli K-12 : B1257; hypothetical protein	complement(1310906..1311412)	Shigella flexneri 2a str. 2457T	1077722
NP_836952.1	CDS	yciF	NC_004741.1	1311458	1311958	R	residues 1 to 166 of 166 are 81.92 pct identical to residues 1 to 166 of 166 from Escherichia coli K-12 : B1258; structural protein	complement(1311458..1311958)	Shigella flexneri 2a str. 2457T	1077652
NP_836953.1	CDS	yciG	NC_004741.1	1312044	1312280	R	residues 1 to 62 of 78 are 98.38 pct identical to residues 1 to 62 of 78 from Escherichia coli K-12 : B1259; hypothetical protein	complement(1312044..1312280)	Shigella flexneri 2a str. 2457T	1077723
NP_836954.1	CDS	trpA	NC_004741.1	1312603	1313409	R	catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha	complement(1312603..1313409)	Shigella flexneri 2a str. 2457T	1080872
NP_836955.1	CDS	trpB	NC_004741.1	1313409	1314602	R	catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta	complement(1313409..1314602)	Shigella flexneri 2a str. 2457T	1077725
NP_836956.1	CDS	trpC	NC_004741.1	1314614	1315975	R	monomeric bifunctional protein; functions in tryptophan biosynthesis pathway; phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate; bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase	complement(1314614..1315975)	Shigella flexneri 2a str. 2457T	1077749
NP_836957.1	CDS	trpD	NC_004741.1	1315976	1317571	R	bifunctional anthranilate synthase II/anthranilate phosphoribosyltransferase; TrpD; forms a heterotetramer with Trp E and the complex catalyzes the formation of anthranilate from chorismate and glutamine; also catalyzes the formation of N-(5-phospho-D-ribosyl)-anthranilate from athranilate and 5-phospho-alpha-D-ribose 1-diphosphate; functions in tryptophan biosynthesis; bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase	complement(1315976..1317571)	Shigella flexneri 2a str. 2457T	1077728
NP_836958.1	CDS	trpE	NC_004741.1	1317571	1319133	R	with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I	complement(1317571..1319133)	Shigella flexneri 2a str. 2457T	1077739
NP_836960.1	CDS	yciV	NC_004741.1	1319407	1320288	D	residues 1 to 293 of 293 are 94.53 pct identical to residues 1 to 293 of 293 from Escherichia coli K-12 : B1266; enzyme	1319407..1320288	Shigella flexneri 2a str. 2457T	1077732
NP_836961.1	CDS	yciO	NC_004741.1	1320249	1320905	D	residues 1 to 218 of 218 are 100.00 pct identical to residues 1 to 218 of 218 from Escherichia coli K-12 : B1267; hypothetical protein	1320249..1320905	Shigella flexneri 2a str. 2457T	1077734
NP_836962.1	CDS	yciL	NC_004741.1	1321006	1321878	D	catalyzes the synthesis of pseudouridine from uracil-2605 in 23S ribosomal RNA; 23S rRNA pseudouridylate synthase B	1321006..1321878	Shigella flexneri 2a str. 2457T	1077733
NP_836963.1	CDS	btuR	NC_004741.1	1321918	1322508	R	catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide; cob(I)yrinic acid a,c-diamide adenosyltransferase	complement(1321918..1322508)	Shigella flexneri 2a str. 2457T	1077716
NP_836964.1	CDS	yciK	NC_004741.1	1322505	1323263	R	residues 1 to 252 of 252 are 99.20 pct identical to residues 1 to 252 of 252 from Escherichia coli K-12 : B1271; short chain dehydrogenase	complement(1322505..1323263)	Shigella flexneri 2a str. 2457T	1077737
NP_836965.1	CDS	sohB	NC_004741.1	1323483	1324532	D	SohB; periplasmic protein; member of the peptidase S49 family; periplasmic protease	1323483..1324532	Shigella flexneri 2a str. 2457T	1077726
NP_836966.1	CDS	yciN	NC_004741.1	1324568	1324819	R	residues 1 to 83 of 83 are 100.00 pct identical to residues 1 to 83 of 83 from Escherichia coli K-12 : B1273; hypothetical protein	complement(1324568..1324819)	Shigella flexneri 2a str. 2457T	1077740
NP_836967.1	CDS	topA	NC_004741.1	1325199	1327796	D	catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I	1325199..1327796	Shigella flexneri 2a str. 2457T	1077741
NP_836968.1	CDS	cysB	NC_004741.1	1328006	1328980	D	LysR-type transcriptional regulator; contains helix-turn-helix (HTH) motif; in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon; autoregulates expression; crystal structure of Klebsiella aerogenes showed tetramer formation; transcriptional regulator CysB	1328006..1328980	Shigella flexneri 2a str. 2457T	1077747
NP_836969.1	CDS	acnA	NC_004741.1	1329982	1332657	D	Catalyzes the conversion of citrate to isocitrate; aconitate hydratase	1329982..1332657	Shigella flexneri 2a str. 2457T	1077742
NP_836970.1	CDS	ribA	NC_004741.1	1332721	1333311	R	catalyzes the conversion of GTP to formate and 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate; GTP cyclohydrolase II	complement(1332721..1333311)	Shigella flexneri 2a str. 2457T	1077746
NP_836971.1	CDS	pgpB	NC_004741.1	1333481	1334245	D	residues 1 to 254 of 254 are 94.09 pct identical to residues 1 to 254 of 254 from Escherichia coli K-12 : B1278; membrane bound; phosphatidylglycerophosphatase B	1333481..1334245	Shigella flexneri 2a str. 2457T	1077744
NP_836972.1	CDS	yciS	NC_004741.1	1334394	1334702	D	residues 1 to 102 of 102 are 87.25 pct identical to residues 1 to 102 of 102 from Escherichia coli K-12 : B1279; hypothetical protein	1334394..1334702	Shigella flexneri 2a str. 2457T	1077717
NP_836973.1	CDS	yciM	NC_004741.1	1334709	1335878	D	residues 10 to 389 of 389 are 99.73 pct identical to residues 10 to 389 of 389 from Escherichia coli K-12 : B1280; tetratricopeptide repeat protein	1334709..1335878	Shigella flexneri 2a str. 2457T	1077745
NP_836974.1	CDS	pyrF	NC_004741.1	1336071	1336808	D	OMP decarboxylase; OMPDCase; OMPdecase; type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase	1336071..1336808	Shigella flexneri 2a str. 2457T	1079523
NP_836975.1	CDS	yciH	NC_004741.1	1336805	1337134	D	involved in start site selection during the initiation of translation; translation initiation factor Sui1	1336805..1337134	Shigella flexneri 2a str. 2457T	1077748
NP_836976.1	CDS	osmB	NC_004741.1	1337260	1337478	R	residues 1 to 72 of 72 are 54.16 pct identical to residues 1 to 72 of 72 from Escherichia coli K-12 : B1283; lipoprotein	complement(1337260..1337478)	Shigella flexneri 2a str. 2457T	1077727
NP_836977.1	CDS	S1371	NC_004741.1	1337747	1338496	R	residues 1 to 249 of 249 are 99.59 pct identical to residues 1 to 249 of 249 from Escherichia coli K-12 : B1284; DEOR-type transcriptional regulator	complement(1337747..1338496)	Shigella flexneri 2a str. 2457T	1077751
NP_836978.1	CDS	rnb	NC_004741.1	1341116	1343050	R	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction; exoribonuclease II	complement(1341116..1343050)	Shigella flexneri 2a str. 2457T	1077752
NP_836979.1	CDS	yciW	NC_004741.1	1343118	1344245	R	residues 1 to 375 of 375 are 93.06 pct identical to residues 27 to 401 of 401 from Escherichia coli K-12 : B1287; oxidoreductase	complement(1343118..1344245)	Shigella flexneri 2a str. 2457T	1077731
NP_836980.1	CDS	fabI	NC_004741.1	1344389	1345177	R	Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-(acyl carrier protein) reductase	complement(1344389..1345177)	Shigella flexneri 2a str. 2457T	1077753
NP_836981.1	CDS	ycjD	NC_004741.1	1345545	1345898	R	residues 1 to 117 of 117 are 95.72 pct identical to residues 1 to 117 of 117 from Escherichia coli K-12 : B1289; hypothetical protein	complement(1345545..1345898)	Shigella flexneri 2a str. 2457T	1077895
NP_836982.1	CDS	sapF	NC_004741.1	1345966	1346772	R	residues 1 to 268 of 268 are 100.00 pct identical to residues 1 to 268 of 268 from Escherichia coli K-12 : B1290; ATP-binding protein of peptide transport system	complement(1345966..1346772)	Shigella flexneri 2a str. 2457T	1077755
NP_836983.1	CDS	sapD	NC_004741.1	1346774	1347766	R	residues 1 to 330 of 330 are 100.00 pct identical to residues 1 to 330 of 330 from Escherichia coli K-12 : B1291; ATP-binding protein of peptide transport system	complement(1346774..1347766)	Shigella flexneri 2a str. 2457T	1077757
NP_836984.1	CDS	sapC	NC_004741.1	1347766	1348656	R	residues 1 to 296 of 296 are 94.59 pct identical to residues 1 to 296 of 296 from Escherichia coli K-12 : B1292; peptide transport permease	complement(1347766..1348656)	Shigella flexneri 2a str. 2457T	1077743
NP_836985.1	CDS	sapB	NC_004741.1	1348643	1349608	R	residues 23 to 321 of 321 are 93.31 pct identical to residues 23 to 321 of 321 from Escherichia coli K-12 : B1293; peptide transport permease	complement(1348643..1349608)	Shigella flexneri 2a str. 2457T	1080636
NP_836986.1	CDS	sapA	NC_004741.1	1349605	1351248	R	residues 1 to 547 of 547 are 95.24 pct identical to residues 1 to 547 of 547 from Escherichia coli K-12 : B1294; peptide transport periplasmic protein	complement(1349605..1351248)	Shigella flexneri 2a str. 2457T	1077759
NP_836987.1	CDS	ycjJ	NC_004741.1	1351939	1353324	R	residues 1 to 461 of 461 are 99.78 pct identical to residues 19 to 479 of 479 from Escherichia coli K-12 : B1296; amino acid/amine transport protein	complement(1351939..1353324)	Shigella flexneri 2a str. 2457T	1077762
NP_836988.1	CDS	S1384	NC_004741.1	1353627	1355045	R	residues 1 to 472 of 472 are 99.36 pct identical to residues 27 to 498 of 498 from Escherichia coli K-12 : B1297; glutamine synthetase	complement(1353627..1355045)	Shigella flexneri 2a str. 2457T	1077761
NP_836989.1	CDS	puuD	NC_004741.1	1355245	1356021	D	catalyzes the degradation of gamma-glutamyl-gamma-aminobutyrate into glutamate and gamma-aminobutyrate; gamma-glutamyl-gamma-aminobutyrate hydrolase	1355245..1356021	Shigella flexneri 2a str. 2457T	1077782
NP_836990.1	CDS	ycjC	NC_004741.1	1356048	1356605	D	regulates genes involved in putrescine degradation; DNA-binding transcriptional repressor PuuR	1356048..1356605	Shigella flexneri 2a str. 2457T	1077763
NP_836991.1	CDS	aldH	NC_004741.1	1356755	1358242	D	catalyzes the formation of gamma-glutamyl-gamma-aminobutyrate from Gamma-glutamyl-gamma-aminobutyraldehyde; involved in putrescine degradation; gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase	1356755..1358242	Shigella flexneri 2a str. 2457T	1077750
NP_836992.1	CDS	ordL	NC_004741.1	1358244	1359524	D	residues 1 to 426 of 426 are 96.00 pct identical to residues 1 to 426 of 426 from Escherichia coli K-12 : B1301; oxidoreductase	1358244..1359524	Shigella flexneri 2a str. 2457T	1077764
NP_836993.1	CDS	goaG	NC_004741.1	1359562	1360827	D	putrescine-inducible GABA aminotransferase; catalyzes the formation of glutamate and succinate semialdehyde from 4-aminobutyrate and 2-oxoglutarate; 4-aminobutyrate transaminase	1359562..1360827	Shigella flexneri 2a str. 2457T	1079511
NP_836994.2	CDS	pspF	NC_004741.1	1360947	1361924	R	transcriptional activator for pspABCE which are induced in response to phage proteins, membrane altering stresses, and impaired proton expor; phage shock protein operon transcriptional activator	complement(1360947..1361924)	Shigella flexneri 2a str. 2457T	1077765
NP_836995.1	CDS	pspA	NC_004741.1	1362091	1362759	D	involved in maintaining membrane potential under membrane stress conditions; also acts as a negative transcriptional regulator of the phage shock protein (psp) operon(pspABCDE) by regulating the transcriptional activator PspF; phage shock protein PspA	1362091..1362759	Shigella flexneri 2a str. 2457T	1080731
NP_836996.1	CDS	pspB	NC_004741.1	1362813	1363037	D	acts together with PspC to induce psp operon during infection with phage, exposure to ethanol or osmotic shock; forms a complex with PspA and C; PspC is required for PspAB binding; phage shock protein B	1362813..1363037	Shigella flexneri 2a str. 2457T	1077768
NP_836997.1	CDS	pspC	NC_004741.1	1363037	1363396	D	with PsbB forms toxin/antitoxin pair; activates the psp operon in response to phage infection, exposure to ethanol or osmotic shock; DNA-binding transcriptional activator PspC	1363037..1363396	Shigella flexneri 2a str. 2457T	1077771
NP_836998.1	CDS	pspD	NC_004741.1	1363405	1363626	D	residues 1 to 73 of 73 are 98.63 pct identical to residues 1 to 73 of 73 from Escherichia coli K-12 : B1307; peripheral inner membrane phage-shock protein	1363405..1363626	Shigella flexneri 2a str. 2457T	1077770
NP_836999.1	CDS	pspE	NC_004741.1	1363669	1364016	D	rhodanese; catalyzes the formation of thiocyanate from thiosulfate and hydrogen cyanide; thiosulfate:cyanide sulfurtransferase	1363669..1364016	Shigella flexneri 2a str. 2457T	1078545
NP_837000.1	CDS	S1397	NC_004741.1	1365387	1365662	D	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	1365387..1365662	Shigella flexneri 2a str. 2457T	1077775
NP_837001.1	CDS	S1398	NC_004741.1	1365581	1366084	D	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri]; IS1 orfB	1365581..1366084	Shigella flexneri 2a str. 2457T	1078548
NP_837002.1	CDS	ycjO	NC_004741.1	1368001	1368882	D	residues 1 to 293 of 293 are 88.73 pct identical to residues 1 to 293 of 293 from Escherichia coli K-12 : B1311; binding-protein dependent transport protein	1368001..1368882	Shigella flexneri 2a str. 2457T	1077779
NP_837003.1	CDS	ycjP	NC_004741.1	1368869	1369711	D	residues 1 to 280 of 280 are 94.64 pct identical to residues 1 to 280 of 280 from Escherichia coli K-12 : B1312; transport system permease	1368869..1369711	Shigella flexneri 2a str. 2457T	1077780
NP_837004.1	CDS	ycjQ	NC_004741.1	1369742	1370794	D	residues 1 to 350 of 350 are 96.28 pct identical to residues 1 to 350 of 350 from Escherichia coli K-12 : B1313; oxidoreductase	1369742..1370794	Shigella flexneri 2a str. 2457T	1077776
NP_837005.1	CDS	ycjS	NC_004741.1	1371597	1372652	D	residues 1 to 351 of 351 are 95.15 pct identical to residues 1 to 351 of 351 from Escherichia coli K-12 : B1315; dehydrogenase	1371597..1372652	Shigella flexneri 2a str. 2457T	1077082
NP_837006.1	CDS	ycjT	NC_004741.1	1372649	1374916	D	residues 1 to 755 of 755 are 96.55 pct identical to residues 1 to 755 of 755 from Escherichia coli K-12 : B1316; hypothetical protein	1372649..1374916	Shigella flexneri 2a str. 2457T	1077785
NP_837007.1	CDS	ycjU	NC_004741.1	1374913	1375572	D	residues 1 to 219 of 219 are 97.26 pct identical to residues 1 to 219 of 219 from Escherichia coli K-12 : B1317; beta-phosphoglucomutase	1374913..1375572	Shigella flexneri 2a str. 2457T	1078550
NP_837008.1	CDS	ycjV	NC_004741.1	1375586	1376554	D	residues 1 to 322 of 322 are 95.34 pct identical to residues 1 to 322 of 322 from Escherichia coli K-12 : B1318; ATP-binding component of a transport system	1375586..1376554	Shigella flexneri 2a str. 2457T	1077786
NP_837009.1	CDS	ycjW	NC_004741.1	1377723	1378721	R	residues 1 to 332 of 332 are 95.48 pct identical to residues 1 to 332 of 332 from Escherichia coli K-12 : B1320; LACI-type transcriptional regulator	complement(1377723..1378721)	Shigella flexneri 2a str. 2457T	1080748
NP_837010.1	CDS	ycjX	NC_004741.1	1378877	1380274	D	residues 1 to 465 of 465 are 98.06 pct identical to residues 1 to 465 of 465 from Escherichia coli K-12 : B1321; enzyme	1378877..1380274	Shigella flexneri 2a str. 2457T	1077788
NP_837011.1	CDS	ycjF	NC_004741.1	1380271	1381332	D	residues 1 to 353 of 353 are 90.65 pct identical to residues 1 to 353 of 353 from Escherichia coli K-12 : B1322; hypothetical protein	1380271..1381332	Shigella flexneri 2a str. 2457T	1078749
NP_837012.1	CDS	tyrR	NC_004741.1	1381480	1383021	D	regulates genes involved in the biosynthesis and transport of aromatic amino acids; DNA-binding transcriptional regulator TyrR	1381480..1383021	Shigella flexneri 2a str. 2457T	1077789
NP_837013.1	CDS	tpx	NC_004741.1	1383065	1383571	R	antioxidant activity; thioredoxin-dependent thiol peroxidase; forms homodimers in solution; shows substrate specificity to alkyl hydroperoxides; periplasmic protein; thiol peroxidase	complement(1383065..1383571)	Shigella flexneri 2a str. 2457T	1077790
NP_837014.1	CDS	ycjG	NC_004741.1	1383690	1384655	D	residues 1 to 321 of 321 are 92.21 pct identical to residues 15 to 335 of 335 from Escherichia coli K-12 : B1325; muconate cycloisomerase I	1383690..1384655	Shigella flexneri 2a str. 2457T	1077791
NP_837015.1	CDS	ycjI	NC_004741.1	1384630	1385358	R	residues 1 to 242 of 242 are 98.76 pct identical to residues 21 to 262 of 262 from Escherichia coli K-12 : B1326; murein peptide amidase A	complement(1384630..1385358)	Shigella flexneri 2a str. 2457T	1077792
NP_837016.1	CDS	S1416	NC_004741.1	1385649	1386287	R	residues 1 to 212 of 212 are 99.05 pct identical to residues 5 to 216 of 216 from GenPept : >gb|AAG56475.1|AE005373_9 (AE005373) Z2446 gene product [Escherichia coli O157:H7 EDL933]; hypothetical protein	complement(1385649..1386287)	Shigella flexneri 2a str. 2457T	1077793
NP_837017.1	CDS	S1418	NC_004741.1	1387115	1388200	D	residues 1 to 348 of 361 are 89.65 pct identical to residues 1 to 348 of 398 from GenPept : >gb|AAL72392.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; ISSfl4 orf	1387115..1388200	Shigella flexneri 2a str. 2457T	1080439
NP_837018.1	CDS	ycjZ	NC_004741.1	1389744	1390226	D	residues 1 to 145 of 160 are 85.51 pct identical to residues 1 to 145 of 299 from Escherichia coli K-12 : B1328; LYSR-type transcriptional regulator	1389744..1390226	Shigella flexneri 2a str. 2457T	1077795
NP_837019.1	CDS	S1422	NC_004741.1	1390223	1390936	R	residues 1 to 237 of 237 are 91.13 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAL72453.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS600 orfB	complement(1390223..1390936)	Shigella flexneri 2a str. 2457T	1077796
NP_837020.1	CDS	S1423	NC_004741.1	1391077	1391379	R	residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAF09029.1| (AF139596) unknown [Shigella flexneri]; IS600 orfA	complement(1391077..1391379)	Shigella flexneri 2a str. 2457T	1077798
NP_837021.1	CDS	S1424	NC_004741.1	1392226	1393860	D	residues 1 to 544 of 544 are 99.63 pct identical to residues 1 to 544 of 544 from Escherichia coli K-12 : B1329; transport periplasmic protein	1392226..1393860	Shigella flexneri 2a str. 2457T	1079542
NP_837022.1	CDS	S1425	NC_004741.1	1393911	1394942	R	residues 1 to 343 of 343 are 92.41 pct identical to residues 1 to 343 of 343 from Escherichia coli K-12 : B1330; hypothetical protein	complement(1393911..1394942)	Shigella flexneri 2a str. 2457T	1077799
NP_837023.1	CDS	S1426	NC_004741.1	1395070	1395372	D	residues 1 to 100 of 100 are 100.00 pct identical to residues 13 to 112 of 112 from GenPept : >gb|AAL72382.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS911 orfA	1395070..1395372	Shigella flexneri 2a str. 2457T	1077800
NP_837024.1	CDS	S1427	NC_004741.1	1395618	1396190	R	residues 1 to 183 of 190 are 99.45 pct identical to residues 206 to 388 of 406 from GenPept : >gb|AAK85176.1| (AF294823) transposase [Shigella sonnei]; IS91 orf	complement(1395618..1396190)	Shigella flexneri 2a str. 2457T	1080952
NP_837025.1	CDS	S1428	NC_004741.1	1396190	1396804	R	residues 1 to 199 of 204 are 98.49 pct identical to residues 1 to 199 of 426 from GenPept : >emb|CAA34970.1| (X17114) transposase IS91 [Escherichia coli]; IS91 orf	complement(1396190..1396804)	Shigella flexneri 2a str. 2457T	1077802
NP_837026.1	CDS	S1429	NC_004741.1	1396804	1397169	R	residues 1 to 121 of 121 are 90.08 pct identical to residues 1 to 121 of 121 from GenPept : >gb|AAK85177.1| (AF294823) InsA [Shigella sonnei]; IS91 orf	complement(1396804..1397169)	Shigella flexneri 2a str. 2457T	1077966
NP_837027.1	CDS	S1431	NC_004741.1	1397440	1397841	D	residues 1 to 124 of 133 are 100.00 pct identical to residues 72 to 195 of 279 from GenPept : >gb|AAL72449.1| (AF386526) InsB [Shigella flexneri 2a]; IS911 orfB	1397440..1397841	Shigella flexneri 2a str. 2457T	1077803
NP_837028.1	CDS	ydaA	NC_004741.1	1398562	1399512	R	with UspC and UspD is involved in resistance to UV irradiation; universal stress protein UspE	complement(1398562..1399512)	Shigella flexneri 2a str. 2457T	1077805
NP_837029.1	CDS	fnr	NC_004741.1	1399664	1400416	R	Global transcription factor that controls the expression of over 100 target genes in response to anoxia; fumarate/nitrate reduction transcriptional regulator	complement(1399664..1400416)	Shigella flexneri 2a str. 2457T	1077807
NP_837030.1	CDS	ogt	NC_004741.1	1400611	1401126	R	residues 1 to 171 of 171 are 91.81 pct identical to residues 1 to 171 of 171 from Escherichia coli K-12 : B1335; O-6-alkylguanine-DNA:cysteine-protein methyltransferase	complement(1400611..1401126)	Shigella flexneri 2a str. 2457T	1076535
NP_837031.1	CDS	S1430	NC_004741.1	1401670	1402056	R	no significant similarities; hypothetical protein	complement(1401670..1402056)	Shigella flexneri 2a str. 2457T	1078064
NP_837032.1	CDS	S1439	NC_004741.1	1402582	1403229	D	residues 4 to 213 of 215 are 30.80 pct identical to residues 26 to 234 of 365 from GenPept : >emb|CAC49806.1| (AL603647)  protein secretion protein, HlyD family, similar to E. coli EmrK [Sinorhizobium meliloti]; secretion protein	1402582..1403229	Shigella flexneri 2a str. 2457T	1077811
NP_837033.1	CDS	S1440	NC_004741.1	1403393	1403659	R	residues 1 to 88 of 88 are 100.00 pct identical to residues 1 to 88 of 88 from GenPept : >gb|AAL72506.1| (AF386526) transposase-like protein [Shigella flexneri 2a]; IS1294 transposase	complement(1403393..1403659)	Shigella flexneri 2a str. 2457T	1077813
NP_837034.1	CDS	S1441	NC_004741.1	1403767	1404591	R	residues 1 to 274 of 274 are 99.27 pct identical to residues 1 to 274 of 399 from GenPept : >gb|AAL72439.1| (AF386526) transposase [Shigella flexneri 2a]; IS1294 transposase	complement(1403767..1404591)	Shigella flexneri 2a str. 2457T	1077878
NP_837035.1	CDS	S1443	NC_004741.1	1404902	1405297	D	residues 2 to 129 of 131 are 56.25 pct identical to residues 236 to 363 of 367 from GenPept : >dbj|BAB49683.1| (AP003000) probable secretion protein [Mesorhizobium loti]; secretion protein	1404902..1405297	Shigella flexneri 2a str. 2457T	1077814
NP_837036.1	CDS	zntB	NC_004741.1	1409073	1410056	D	residues 1 to 327 of 327 are 93.27 pct identical to residues 1 to 327 of 327 from Escherichia coli K-12 : B1342; zinc transporter	1409073..1410056	Shigella flexneri 2a str. 2457T	1077816
NP_837037.1	CDS	dbpA	NC_004741.1	1410534	1411901	D	exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA; ATP-dependent RNA helicase DbpA	1410534..1411901	Shigella flexneri 2a str. 2457T	1077817
NP_837038.1	CDS	ydaO	NC_004741.1	1412030	1412965	R	TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs; C32 tRNA thiolase	complement(1412030..1412965)	Shigella flexneri 2a str. 2457T	1077818
NP_837039.1	CDS	ynaF	NC_004741.1	1413141	1413647	R	residues 1 to 168 of 168 are 99.40 pct identical to residues 1 to 168 of 168 from Escherichia coli K-12 : B1376; filament protein	complement(1413141..1413647)	Shigella flexneri 2a str. 2457T	1077819
NP_837040.1	CDS	ydbK	NC_004741.1	1415212	1418736	R	residues 1 to 1174 of 1174 are 99.14 pct identical to residues 1 to 1174 of 1174 from Escherichia coli K-12 : B1378; oxidoreductase, Fe-S subunit	complement(1415212..1418736)	Shigella flexneri 2a str. 2457T	1077822
NP_837041.1	CDS	S1453	NC_004741.1	1419409	1419912	R	residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri]; IS1 orfB	complement(1419409..1419912)	Shigella flexneri 2a str. 2457T	1077824
NP_837042.1	CDS	S1454	NC_004741.1	1419831	1420106	R	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(1419831..1420106)	Shigella flexneri 2a str. 2457T	1077826
NP_837043.1	CDS	ydbL	NC_004741.1	1420558	1420887	R	residues 1 to 109 of 109 are 97.24 pct identical to residues 2 to 110 of 110 from Escherichia coli K-12 : B1383; hypothetical protein	complement(1420558..1420887)	Shigella flexneri 2a str. 2457T	1077827
NP_837044.1	CDS	ynbE	NC_004741.1	1420892	1421077	R	residues 1 to 61 of 61 are 100.00 pct identical to residues 1 to 61 of 61 from Escherichia coli K-12 : B1382; hypothetical protein	complement(1420892..1421077)	Shigella flexneri 2a str. 2457T	1077828
NP_837045.1	CDS	ydbH	NC_004741.1	1421074	1423713	R	residues 29 to 879 of 879 are 96.94 pct identical to residues 29 to 879 of 879 from Escherichia coli K-12 : B1381; hypothetical protein	complement(1421074..1423713)	Shigella flexneri 2a str. 2457T	1077831
NP_837046.1	CDS	ldhA	NC_004741.1	1423921	1424910	D	Catalyzes the reduction of sulfopyruvate to (R)-sulfolactate much more efficiently than the reverse reaction. Also catalyzes the reduction of oxaloacetate, alpha-ketoglutarate, and to a much lower extent, KHTCA, but not pyruvate. Involved in the biosynthes; D-lactate dehydrogenase	1423921..1424910	Shigella flexneri 2a str. 2457T	1077832
NP_837047.1	CDS	S1461	NC_004741.1	1425347	1425850	R	residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri]; IS1 orfB	complement(1425347..1425850)	Shigella flexneri 2a str. 2457T	1077834
NP_837048.1	CDS	S1462	NC_004741.1	1425769	1426044	R	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(1425769..1426044)	Shigella flexneri 2a str. 2457T	1077835
NP_837049.1	CDS	ydbD	NC_004741.1	1426639	1428273	D	residues 1 to 544 of 544 are 98.16 pct identical to residues 227 to 770 of 770 from Escherichia coli K-12 : B1407; hypothetical protein	1426639..1428273	Shigella flexneri 2a str. 2457T	1077836
NP_837050.1	CDS	S1464	NC_004741.1	1428444	1429049	D	residues 1 to 200 of 201 are 82.99 pct identical to residues 3 to 202 of 203 from Escherichia coli K-12 : B1408; hypothetical protein	1428444..1429049	Shigella flexneri 2a str. 2457T	1077837
NP_837051.1	CDS	S1465	NC_004741.1	1429201	1429944	D	residues 1 to 264 of 264 are 79.92 pct identical to residues 35 to 298 of 298 from Escherichia coli K-12 : B1409; phosphatidate cytidylyltransferase	1429201..1429944	Shigella flexneri 2a str. 2457T	1077838
NP_837052.1	CDS	S1466	NC_004741.1	1429960	1431717	D	residues 1 to 585 of 585 are 96.92 pct identical to residues 1 to 585 of 585 from Escherichia coli K-12 : B1410; hypothetical protein	1429960..1431717	Shigella flexneri 2a str. 2457T	1077839
NP_837053.1	CDS	S1468	NC_004741.1	1432419	1433132	R	residues 1 to 237 of 237 are 91.13 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAB86997.1| (U97492) hypothetical 31 KD protein [Shigella flexneri]; IS600 orfB	complement(1432419..1433132)	Shigella flexneri 2a str. 2457T	1077841
NP_837054.1	CDS	S1469	NC_004741.1	1433273	1433575	R	residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAF09029.1| (AF139596) unknown [Shigella flexneri]; IS600 orfA	complement(1433273..1433575)	Shigella flexneri 2a str. 2457T	1077842
NP_837055.1	CDS	acpD	NC_004741.1	1434338	1434943	R	FMN-dependent; requires NADH; catalyzes the cleavage of azo bond in aromatic azo compounds; azoreductase	complement(1434338..1434943)	Shigella flexneri 2a str. 2457T	1077844
NP_837056.1	CDS	hrpA	NC_004741.1	1435201	1439046	D	involved in the post-transcriptional processing of the daa operon mRNA, which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain; ATP-dependent RNA helicase HrpA	1435201..1439046	Shigella flexneri 2a str. 2457T	1080893
NP_837057.1	CDS	S1473	NC_004741.1	1439247	1439960	R	residues 1 to 237 of 237 are 91.13 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAL72453.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS600 orfB	complement(1439247..1439960)	Shigella flexneri 2a str. 2457T	1077845
NP_837058.1	CDS	aldA	NC_004741.1	1441195	1442634	D	NAD-linked; aldehyde dehydrogenase A	1441195..1442634	Shigella flexneri 2a str. 2457T	1077848
NP_837059.2	CDS	cybB	NC_004741.1	1443865	1444395	D	B-type di-heme cytochrome with a major alpha-absorption peak at 561 nm and a minor peak at 555 nm; cytochrome b561	1443865..1444395	Shigella flexneri 2a str. 2457T	1077866
NP_837060.1	CDS	ydcA	NC_004741.1	1444640	1444813	D	residues 1 to 57 of 57 are 100.00 pct identical to residues 1 to 57 of 57 from Escherichia coli K-12 : B1419; hypothetical protein	1444640..1444813	Shigella flexneri 2a str. 2457T	1077850
NP_837061.1	CDS	S1482	NC_004741.1	1445135	1445986	R	residues 1 to 283 of 283 are 98.93 pct identical to residues 1 to 283 of 283 from GenPept : >gb|AAC76582.1| (AE000433) IS150  transposase [Escherichia coli K12]; partial; IS103 orf	complement(1445135..1445986)	Shigella flexneri 2a str. 2457T	1077801
NP_837062.1	CDS	S1483	NC_004741.1	1445983	1446504	R	residues 1 to 173 of 173 are 100.00 pct identical to residues 1 to 173 of 173 from GenPept : >gb|AAB18534.1| (U00039) orfA in IS150 [Escherichia coli]; partial; IS103 orf	complement(1445983..1446504)	Shigella flexneri 2a str. 2457T	1077858
NP_837063.1	CDS	trg	NC_004741.1	1446880	1448520	D	residues 1 to 546 of 546 are 87.72 pct identical to residues 1 to 546 of 546 from Escherichia coli K-12 : B1421; methyl-accepting chemotaxis protein III, ribose sensor receptor	1446880..1448520	Shigella flexneri 2a str. 2457T	1077859
NP_837064.1	CDS	S1486	NC_004741.1	1448558	1449622	R	residues 1 to 354 of 354 are 99.15 pct identical to residues 1 to 354 of 354 from Escherichia coli K-12 : B1422; LYSR-type transcriptional regulator	complement(1448558..1449622)	Shigella flexneri 2a str. 2457T	1077862
NP_837065.1	CDS	S1487	NC_004741.1	1449698	1451041	D	residues 1 to 447 of 447 are 96.86 pct identical to residues 1 to 447 of 447 from Escherichia coli K-12 : B1423; hypothetical protein	1449698..1451041	Shigella flexneri 2a str. 2457T	1077855
NP_837066.1	CDS	mdoD	NC_004741.1	1451266	1452921	D	involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans; glucan biosynthesis protein D	1451266..1452921	Shigella flexneri 2a str. 2457T	1077864
NP_837067.1	CDS	S1489	NC_004741.1	1452842	1453045	R	residues 1 to 67 of 67 are 98.50 pct identical to residues 1 to 67 of 67 from Escherichia coli K-12 : B1425; hypothetical protein	complement(1452842..1453045)	Shigella flexneri 2a str. 2457T	1077847
NP_837068.1	CDS	ydcH	NC_004741.1	1453118	1453285	D	residues 1 to 55 of 55 are 100.00 pct identical to residues 1 to 55 of 55 from Escherichia coli K-12 : B1426; hypothetical protein	1453118..1453285	Shigella flexneri 2a str. 2457T	1077865
NP_837069.1	CDS	rimL	NC_004741.1	1453348	1453884	D	residues 1 to 178 of 178 are 98.31 pct identical to residues 1 to 178 of 179 from Escherichia coli K-12 : B1427; involved in acetylation of N-terminal serine of 30S ribosomal subunit protein L7; ribosomal-protein-L7/L12-serine acetyltransferase	1453348..1453884	Shigella flexneri 2a str. 2457T	1077880
NP_837070.1	CDS	S1492	NC_004741.1	1453879	1454859	R	residues 1 to 326 of 326 are 98.46 pct identical to residues 1 to 326 of 326 from Escherichia coli K-12 : B1428; hypothetical protein	complement(1453879..1454859)	Shigella flexneri 2a str. 2457T	1077867
NP_837071.1	CDS	tehA	NC_004741.1	1454983	1455975	D	residues 1 to 330 of 330 are 94.24 pct identical to residues 1 to 330 of 330 from Escherichia coli K-12 : B1429; potassium-tellurite ethidium and proflavin transporter	1454983..1455975	Shigella flexneri 2a str. 2457T	1077868
NP_837072.1	CDS	tehB	NC_004741.1	1455972	1456565	D	with TehA confers resistance to tellurite; tellurite resistance protein TehB	1455972..1456565	Shigella flexneri 2a str. 2457T	1077871
NP_837073.1	CDS	S1495	NC_004741.1	1456868	1457524	D	residues 1 to 218 of 218 are 91.44 pct identical to residues 1 to 222 of 222 from Escherichia coli K-12 : B1431; hypothetical protein	1456868..1457524	Shigella flexneri 2a str. 2457T	1077887
NP_837074.1	CDS	S1497	NC_004741.1	1459137	1460324	R	residues 1 to 388 of 395 are 97.93 pct identical to residues 1 to 388 of 426 from GenPept : >emb|CAA34970.1| (X17114) transposase IS91 [Escherichia coli]; partial; IS91 orf	complement(1459137..1460324)	Shigella flexneri 2a str. 2457T	1079918
NP_837075.1	CDS	S1498	NC_004741.1	1460353	1460679	D	residues 1 to 67 of 108 are 98.50 pct identical to residues 1 to 67 of 79 from GenPept : >gb|AAC70084.1| (AF074613) unknown [Escherichia coli O157:H7]; partial; IS91 orf	1460353..1460679	Shigella flexneri 2a str. 2457T	1077873
NP_837076.1	CDS	S1499	NC_004741.1	1461247	1461522	D	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	1461247..1461522	Shigella flexneri 2a str. 2457T	1077874
NP_837077.1	CDS	S1500	NC_004741.1	1461441	1461944	D	residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri]; IS1 orfB	1461441..1461944	Shigella flexneri 2a str. 2457T	1076486
NP_837078.1	CDS	S1502	NC_004741.1	1462735	1463037	D	residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAL72452.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS600 orfA	1462735..1463037	Shigella flexneri 2a str. 2457T	1077921
NP_837079.1	CDS	S1503	NC_004741.1	1463178	1463891	D	residues 1 to 237 of 237 are 90.71 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAL72453.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS600 orfB	1463178..1463891	Shigella flexneri 2a str. 2457T	1077876
NP_837080.1	CDS	S1504	NC_004741.1	1464148	1464423	R	residues 1 to 91 of 91 are 96.70 pct identical to residues 1 to 91 of 91 from Escherichia coli K-12 : B1837; hypothetical protein	complement(1464148..1464423)	Shigella flexneri 2a str. 2457T	1077877
NP_837081.1	CDS	S1505	NC_004741.1	1464444	1464680	R	residues 1 to 78 of 78 are 100.00 pct identical to residues 6 to 83 of 83 from Escherichia coli K-12 : B1836; hypothetical protein	complement(1464444..1464680)	Shigella flexneri 2a str. 2457T	1079524
NP_837082.1	CDS	S1508	NC_004741.1	1468906	1470189	R	residues 1 to 427 of 427 are 95.55 pct identical to residues 1 to 427 of 427 from Escherichia coli K-12 : B1833; hypothetical protein	complement(1468906..1470189)	Shigella flexneri 2a str. 2457T	1077881
NP_837083.1	CDS	S1509	NC_004741.1	1470319	1470816	D	residues 1 to 165 of 165 are 98.18 pct identical to residues 19 to 183 of 183 from Escherichia coli K-12 : B1832; hypothetical protein	1470319..1470816	Shigella flexneri 2a str. 2457T	1080914
NP_837084.1	CDS	yebJ	NC_004741.1	1471492	1471611	D	residues 1 to 39 of 39 are 100.00 pct identical to residues 1 to 39 of 39 from Escherichia coli K-12 : B1831; hypothetical protein	1471492..1471611	Shigella flexneri 2a str. 2457T	1077883
NP_837085.2	CDS	prc	NC_004741.1	1471631	1473679	D	Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; carboxy-terminal protease	1471631..1473679	Shigella flexneri 2a str. 2457T	1077894
NP_837086.1	CDS	htpX	NC_004741.1	1473874	1474752	D	metalloprotease; heat shock protein HtpX	1473874..1474752	Shigella flexneri 2a str. 2457T	1077884
NP_837087.1	CDS	S1513	NC_004741.1	1474798	1476282	R	residues 1 to 494 of 494 are 94.12 pct identical to residues 1 to 494 of 494 from Escherichia coli K-12 : B1828; transporter	complement(1474798..1476282)	Shigella flexneri 2a str. 2457T	1077885
NP_837088.1	CDS	S1514	NC_004741.1	1476348	1477139	D	residues 1 to 263 of 263 are 99.23 pct identical to residues 1 to 263 of 263 from Escherichia coli K-12 : B1827; regulator	1476348..1477139	Shigella flexneri 2a str. 2457T	1077870
NP_837089.1	CDS	S1515	NC_004741.1	1477680	1477823	D	residues 1 to 47 of 47 are 72.34 pct identical to residues 1 to 47 of 47 from Escherichia coli K-12 : B1826; hypothetical protein	1477680..1477823	Shigella flexneri 2a str. 2457T	1077886
NP_837090.1	CDS	S1516	NC_004741.1	1477898	1478185	D	residues 1 to 95 of 95 are 82.10 pct identical to residues 1 to 95 of 95 from Escherichia coli K-12 : B1825; hypothetical protein	1477898..1478185	Shigella flexneri 2a str. 2457T	1078656
NP_837091.1	CDS	S1517	NC_004741.1	1478855	1478998	D	residues 1 to 47 of 47 are 100.00 pct identical to residues 1 to 47 of 47 from Escherichia coli K-12 : B1824; hypothetical protein	1478855..1478998	Shigella flexneri 2a str. 2457T	1077890
NP_837092.1	CDS	cspC	NC_004741.1	1479011	1479220	D	residues 1 to 69 of 69 are 100.00 pct identical to residues 1 to 69 of 69 from Escherichia coli K-12 : B1823; cold shock-like protein CspC	1479011..1479220	Shigella flexneri 2a str. 2457T	1077891
NP_837093.1	CDS	rrmA	NC_004741.1	1479386	1480195	D	methylates the guanosine in position 745 of 23S rRNA; required for translation and cell growth; 23S rRNA methyltransferase A	1479386..1480195	Shigella flexneri 2a str. 2457T	1076871
NP_837094.1	CDS	S1520	NC_004741.1	1480192	1480812	R	membrane protein YebN; hypothetical protein	complement(1480192..1480812)	Shigella flexneri 2a str. 2457T	1077892
NP_837095.1	CDS	S1521	NC_004741.1	1481221	1481724	R	residues 1 to 167 of 167 are 89.22 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri]; IS1 orfB	complement(1481221..1481724)	Shigella flexneri 2a str. 2457T	1077893
NP_837096.1	CDS	S1522	NC_004741.1	1481643	1481918	R	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(1481643..1481918)	Shigella flexneri 2a str. 2457T	1077889
NP_837097.1	CDS	S1523	NC_004741.1	1481947	1482423	R	residues 1 to 150 of 158 are 90.66 pct identical to residues 1 to 150 of 152 from Escherichia coli K-12 : B1820; hypothetical protein	complement(1481947..1482423)	Shigella flexneri 2a str. 2457T	1077896
NP_837098.1	CDS	manZ	NC_004741.1	1482478	1483338	R	hosphoenolpyruvate-dependent sugar phosphotransferase system catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IID with IIC forms the translocation channel; mannose-specific PTS system protein IID	complement(1482478..1483338)	Shigella flexneri 2a str. 2457T	1077853
NP_837099.1	CDS	manY	NC_004741.1	1483342	1484142	R	residues 1 to 266 of 266 are 94.36 pct identical to residues 1 to 266 of 266 from Escherichia coli K-12 : B1818; mannose-specific; PTS enzyme IIC	complement(1483342..1484142)	Shigella flexneri 2a str. 2457T	1077897
NP_837100.1	CDS	manX	NC_004741.1	1484205	1485176	R	residues 1 to 323 of 323 are 91.02 pct identical to residues 1 to 323 of 323 from Escherichia coli K-12 : B1817; mannose-specific; PTS enzyme IIAB	complement(1484205..1485176)	Shigella flexneri 2a str. 2457T	1077900
NP_837101.1	CDS	yoaE	NC_004741.1	1485639	1487189	D	residues 1 to 516 of 516 are 91.69 pct identical to residues 1 to 518 of 518 from Escherichia coli K-12 : B1816; transporter	1485639..1487189	Shigella flexneri 2a str. 2457T	1077901
NP_837102.1	CDS	S1528	NC_004741.1	1487193	1488791	R	residues 1 to 532 of 532 are 96.05 pct identical to residues 11 to 542 of 542 from Escherichia coli K-12 : B1815; hypothetical protein	complement(1487193..1488791)	Shigella flexneri 2a str. 2457T	1077925
NP_837103.1	CDS	sdaA	NC_004741.1	1488922	1490286	R	residues 1 to 454 of 454 are 97.35 pct identical to residues 1 to 454 of 454 from Escherichia coli K-12 : B1814; L-serine deaminase	complement(1488922..1490286)	Shigella flexneri 2a str. 2457T	1077902
NP_837104.1	CDS	yeaB	NC_004741.1	1490470	1491048	R	residues 1 to 192 of 192 are 92.18 pct identical to residues 1 to 192 of 192 from Escherichia coli K-12 : B1813; hypothetical protein	complement(1490470..1491048)	Shigella flexneri 2a str. 2457T	1077903
NP_837105.1	CDS	pabB	NC_004741.1	1491052	1492413	R	catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine; para-aminobenzoate synthase component I	complement(1491052..1492413)	Shigella flexneri 2a str. 2457T	1078761
NP_837106.1	CDS	S1532	NC_004741.1	1492487	1492666	D	residues 1 to 59 of 59 are 96.61 pct identical to residues 1 to 59 of 59 from Escherichia coli K-12 : B1811; hypothetical protein	1492487..1492666	Shigella flexneri 2a str. 2457T	1077907
NP_837107.1	CDS	S1533	NC_004741.1	1492786	1493145	R	residues 1 to 119 of 119 are 100.00 pct identical to residues 1 to 119 of 119 from Escherichia coli K-12 : B1810; hypothetical protein	complement(1492786..1493145)	Shigella flexneri 2a str. 2457T	1076957
NP_837108.1	CDS	S1534	NC_004741.1	1493507	1493899	R	residues 1 to 130 of 130 are 100.00 pct identical to residues 1 to 130 of 130 from Escherichia coli K-12 : B1809; hypothetical protein	complement(1493507..1493899)	Shigella flexneri 2a str. 2457T	1077908
NP_837109.1	CDS	S1535	NC_004741.1	1493983	1495893	D	residues 1 to 636 of 636 are 99.68 pct identical to residues 1 to 636 of 636 from Escherichia coli K-12 : B1808; enzyme	1493983..1495893	Shigella flexneri 2a str. 2457T	1077909
NP_837110.1	CDS	yeaZ	NC_004741.1	1495951	1496646	D	residues 1 to 231 of 231 are 92.64 pct identical to residues 1 to 231 of 231 from Escherichia coli K-12 : B1807; hypothetical protein	1495951..1496646	Shigella flexneri 2a str. 2457T	1077979
NP_837111.1	CDS	S1537	NC_004741.1	1496686	1497267	D	residues 1 to 193 of 193 are 87.56 pct identical to residues 1 to 193 of 193 from Escherichia coli K-12 : B1806; outer membrane protein	1496686..1497267	Shigella flexneri 2a str. 2457T	1077910
NP_837112.1	CDS	fadD	NC_004741.1	1497407	1499158	D	Activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase	1497407..1499158	Shigella flexneri 2a str. 2457T	1077911
NP_837113.1	CDS	rnd	NC_004741.1	1499240	1500355	D	residues 1 to 371 of 371 are 95.68 pct identical to residues 5 to 375 of 375 from Escherichia coli K-12 : B1804; processes tRNA precursor; ribonuclease D	1499240..1500355	Shigella flexneri 2a str. 2457T	1077692
NP_837114.1	CDS	yeaX	NC_004741.1	1500409	1501374	R	residues 1 to 321 of 321 are 98.13 pct identical to residues 1 to 321 of 321 from Escherichia coli K-12 : B1803; diogenase beta subunit	complement(1500409..1501374)	Shigella flexneri 2a str. 2457T	1077913
NP_837115.1	CDS	S1542	NC_004741.1	1502389	1502955	R	residues 80 to 188 of 188 are 48.62 pct identical to residues 68 to 174 of 174 from GenPept : >gb|AAF01132.1|AF083977_53 (AF083977) c-repressor [Enterobacteria phage Mu]; repressor protein	complement(1502389..1502955)	Shigella flexneri 2a str. 2457T	1077934
NP_837116.1	CDS	S1543	NC_004741.1	1503322	1503624	D	residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAL72452.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS600 orfA	1503322..1503624	Shigella flexneri 2a str. 2457T	1077915
NP_837117.1	CDS	S1544	NC_004741.1	1503765	1504478	D	residues 1 to 237 of 237 are 91.13 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAL72453.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS600 orfB	1503765..1504478	Shigella flexneri 2a str. 2457T	1077905
NP_837118.1	CDS	yeaP	NC_004741.1	1505400	1506425	R	residues 1 to 341 of 341 are 98.82 pct identical to residues 44 to 384 of 384 from Escherichia coli K-12 : B1794; hypothetical protein	complement(1505400..1506425)	Shigella flexneri 2a str. 2457T	1077918
NP_837119.1	CDS	yoaF	NC_004741.1	1506608	1506862	D	residues 1 to 84 of 84 are 100.00 pct identical to residues 1 to 84 of 84 from Escherichia coli K-12 : B1793; hypothetical protein	1506608..1506862	Shigella flexneri 2a str. 2457T	1080908
NP_837120.1	CDS	yeaO	NC_004741.1	1506884	1507252	R	residues 1 to 122 of 122 are 96.72 pct identical to residues 1 to 122 of 122 from Escherichia coli K-12 : B1792; hypothetical protein	complement(1506884..1507252)	Shigella flexneri 2a str. 2457T	1077919
NP_837121.1	CDS	yeaN	NC_004741.1	1507405	1508466	R	residues 1 to 326 of 353 are 89.26 pct identical to residues 1 to 326 of 393 from Escherichia coli K-12 : B1791; amino acid/amine transport protein	complement(1507405..1508466)	Shigella flexneri 2a str. 2457T	1077854
NP_837122.1	CDS	yeaL	NC_004741.1	1509337	1509783	R	residues 1 to 148 of 148 are 74.32 pct identical to residues 1 to 148 of 148 from Escherichia coli K-12 : B1789; hypothetical protein	complement(1509337..1509783)	Shigella flexneri 2a str. 2457T	1077857
NP_837123.1	CDS	S1551	NC_004741.1	1509905	1510057	D	residues 1 to 50 of 50 are 80.00 pct identical to residues 1 to 50 of 50 from Escherichia coli K-12 : B1788; hypothetical protein	1509905..1510057	Shigella flexneri 2a str. 2457T	1077923
NP_837124.1	CDS	yeaK	NC_004741.1	1510058	1510561	R	residues 1 to 167 of 167 are 88.62 pct identical to residues 1 to 167 of 167 from Escherichia coli K-12 : B1787; hypothetical protein	complement(1510058..1510561)	Shigella flexneri 2a str. 2457T	1080727
NP_837125.1	CDS	S1554	NC_004741.1	1512189	1512902	D	residues 1 to 237 of 237 are 91.13 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAL72453.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS600 orfB	1512189..1512902	Shigella flexneri 2a str. 2457T	1077825
NP_837126.1	CDS	yeaG	NC_004741.1	1512927	1514306	R	residues 1 to 455 of 459 are 99.56 pct identical to residues 1 to 455 of 644 from Escherichia coli K-12 : B1783; hypothetical protein	complement(1512927..1514306)	Shigella flexneri 2a str. 2457T	1077924
NP_837127.1	CDS	yeaF	NC_004741.1	1514742	1515488	D	residues 1 to 248 of 248 are 100.00 pct identical to residues 1 to 248 of 248 from Escherichia coli K-12 : B1782; hypothetical protein	1514742..1515488	Shigella flexneri 2a str. 2457T	1080449
NP_837128.1	CDS	S1557	NC_004741.1	1515578	1516339	D	residues 1 to 253 of 253 are 83.09 pct identical to residues 1 to 284 of 284 from Escherichia coli K-12 : B1781; aldehyde reductase	1515578..1516339	Shigella flexneri 2a str. 2457T	1077926
NP_837129.1	CDS	yeaD	NC_004741.1	1516390	1517274	R	residues 1 to 294 of 294 are 99.31 pct identical to residues 8 to 301 of 301 from Escherichia coli K-12 : B1780; hypothetical protein	complement(1516390..1517274)	Shigella flexneri 2a str. 2457T	1077927
NP_837130.1	CDS	gapA	NC_004741.1	1517358	1518353	R	catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; glyceraldehyde-3-phosphate dehydrogenase	complement(1517358..1518353)	Shigella flexneri 2a str. 2457T	1077928
NP_837131.1	CDS	yeaA	NC_004741.1	1518695	1519108	D	this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; methionine sulfoxide reductase B	1518695..1519108	Shigella flexneri 2a str. 2457T	1080943
NP_837132.1	CDS	S1561	NC_004741.1	1519150	1519422	D	residues 1 to 90 of 90 are 97.77 pct identical to residues 16 to 105 of 105 from Escherichia coli K-12 : B1777; hypothetical protein	1519150..1519422	Shigella flexneri 2a str. 2457T	1077930
NP_837133.1	CDS	S1562	NC_004741.1	1519792	1520868	D	residues 1 to 358 of 358 are 99.16 pct identical to residues 1 to 358 of 358 from Escherichia coli K-12 : B1776; oxidoreductase	1519792..1520868	Shigella flexneri 2a str. 2457T	1077952
NP_837134.1	CDS	S1563	NC_004741.1	1520895	1522274	D	residues 1 to 459 of 459 are 90.63 pct identical to residues 1 to 459 of 459 from Escherichia coli K-12 : B1775; transporter	1520895..1522274	Shigella flexneri 2a str. 2457T	1077933
NP_837135.1	CDS	S1565	NC_004741.1	1523357	1524193	D	residues 1 to 278 of 278 are 98.20 pct identical to residues 1 to 278 of 278 from Escherichia coli K-12 : B1773; aldolase	1523357..1524193	Shigella flexneri 2a str. 2457T	1077935
NP_837136.1	CDS	S1566	NC_004741.1	1524198	1525145	D	residues 1 to 315 of 315 are 98.73 pct identical to residues 8 to 322 of 322 from Escherichia coli K-12 : B1772; kinase	1524198..1525145	Shigella flexneri 2a str. 2457T	1077943
NP_837137.1	CDS	S1567	NC_004741.1	1525200	1526135	D	residues 1 to 311 of 311 are 99.03 pct identical to residues 16 to 326 of 326 from Escherichia coli K-12 : B1771; hypothetical protein	1525200..1526135	Shigella flexneri 2a str. 2457T	1077936
NP_837138.1	CDS	S1568	NC_004741.1	1526272	1527030	D	residues 1 to 252 of 252 are 98.41 pct identical to residues 1 to 252 of 252 from Escherichia coli K-12 : B1770; DEOR-type transcriptional regulator	1526272..1527030	Shigella flexneri 2a str. 2457T	1077937
NP_837139.1	CDS	ydjE	NC_004741.1	1527148	1528506	D	residues 1 to 452 of 452 are 95.79 pct identical to residues 1 to 452 of 452 from Escherichia coli K-12 : B1769; transporter	1527148..1528506	Shigella flexneri 2a str. 2457T	1078013
NP_837140.2	CDS	ydjB	NC_004741.1	1528599	1529240	R	catalyzes the formation of nicotinate from nicotinamide in NAD biosynthesis and the formation of pyrazinoate from pyrazinamide; nicotinamidase/pyrazinamidase	complement(1528599..1529240)	Shigella flexneri 2a str. 2457T	1077939
NP_837141.1	CDS	ansA	NC_004741.1	1529251	1530267	R	converts asparagine to aspartate and ammonia; asparaginase	complement(1529251..1530267)	Shigella flexneri 2a str. 2457T	1077946
NP_837142.1	CDS	sppA	NC_004741.1	1530434	1532290	R	SppA; catalyzes the degradation of cleaved signal peptides; essential to maintain secretion of mature proteins across the membrane; protease 4	complement(1530434..1532290)	Shigella flexneri 2a str. 2457T	1078030
NP_837143.1	CDS	ydjA	NC_004741.1	1532451	1533002	D	residues 1 to 183 of 183 are 92.34 pct identical to residues 1 to 183 of 183 from Escherichia coli K-12 : B1765; hypothetical protein	1532451..1533002	Shigella flexneri 2a str. 2457T	1077947
NP_837144.1	CDS	selD	NC_004741.1	1533119	1534162	D	catalyzes the formation of selenophosphate from selenide and ATP; selenophosphate synthetase	1533119..1534162	Shigella flexneri 2a str. 2457T	1080913
NP_837145.1	CDS	topB	NC_004741.1	1534167	1536128	D	decatenates replicating daughter chromosomes; DNA topoisomerase III	1534167..1536128	Shigella flexneri 2a str. 2457T	1077948
NP_837146.2	CDS	S1578	NC_004741.1	1538704	1539069	D	IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats; insertion sequence 2 OrfA protein	1538704..1539069	Shigella flexneri 2a str. 2457T	1077950
NP_837147.2	CDS	S1579	NC_004741.1	1539027	1539932	D	IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats; insertion element IS2 transposase InsD	1539027..1539932	Shigella flexneri 2a str. 2457T	1077951
NP_837148.1	CDS	S1580	NC_004741.1	1540327	1540599	D	residues 1 to 90 of 90 are 98.88 pct identical to residues 1 to 90 of 90 from Escherichia coli K-12 : B1760; hypothetical protein	1540327..1540599	Shigella flexneri 2a str. 2457T	1078021
NP_837149.1	CDS	S1581	NC_004741.1	1540565	1540972	R	residues 1 to 120 of 135 are 96.66 pct identical to residues 1 to 120 of 135 from Escherichia coli K-12 : B1759; pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase	complement(1540565..1540972)	Shigella flexneri 2a str. 2457T	1077954
NP_837150.1	CDS	S1582	NC_004741.1	1541059	1541679	D	residues 1 to 206 of 206 are 88.83 pct identical to residues 3 to 208 of 208 from Escherichia coli K-12 : B1758; cytochrome oxidase	1541059..1541679	Shigella flexneri 2a str. 2457T	1077843
NP_837151.1	CDS	S1584	NC_004741.1	1543062	1543715	R	residues 1 to 217 of 217 are 93.08 pct identical to residues 1 to 217 of 217 from Escherichia coli K-12 : B1756; ATP-binding component of a transport system	complement(1543062..1543715)	Shigella flexneri 2a str. 2457T	1080918
NP_837152.1	CDS	S1588	NC_004741.1	1546096	1547424	D	residues 1 to 442 of 442 are 99.77 pct identical to residues 7 to 448 of 448 from GenPept : >gb|AAK18333.1|AF348706_22 (AF348706) IS4 orf [Shigella flexneri]; IS4 orf	1546096..1547424	Shigella flexneri 2a str. 2457T	1077960
NP_837153.1	CDS	ynjA	NC_004741.1	1547774	1548322	R	residues 1 to 182 of 182 are 92.30 pct identical to residues 1 to 182 of 182 from Escherichia coli K-12 : B1753; hypothetical protein	complement(1547774..1548322)	Shigella flexneri 2a str. 2457T	1077992
NP_837154.1	CDS	ydjZ	NC_004741.1	1548322	1549026	R	residues 1 to 233 of 234 are 91.41 pct identical to residues 2 to 234 of 235 from Escherichia coli K-12 : B1752; hypothetical protein	complement(1548322..1549026)	Shigella flexneri 2a str. 2457T	1077961
NP_837155.1	CDS	ydjY	NC_004741.1	1549044	1549883	R	residues 1 to 279 of 279 are 92.47 pct identical to residues 1 to 279 of 279 from Escherichia coli K-12 : B1751; hypothetical protein	complement(1549044..1549883)	Shigella flexneri 2a str. 2457T	1077984
NP_837156.1	CDS	ydjX	NC_004741.1	1549726	1550436	R	residues 1 to 236 of 236 are 91.10 pct identical to residues 17 to 252 of 252 from Escherichia coli K-12 : B1750; hypothetical protein	complement(1549726..1550436)	Shigella flexneri 2a str. 2457T	1077962
NP_837157.1	CDS	xthA	NC_004741.1	1550603	1551409	R	removes the damaged DNA at cytosines and guanines by cleaving on the 3' side of the AP site by a beta-elimination reaction; exonuclease III	complement(1550603..1551409)	Shigella flexneri 2a str. 2457T	1077965
NP_837158.1	CDS	S1596	NC_004741.1	1553075	1554106	D	residues 1 to 343 of 343 are 99.70 pct identical to residues 2 to 344 of 344 from Escherichia coli K-12 : B1747; arginine succinyltransferase	1553075..1554106	Shigella flexneri 2a str. 2457T	1077968
NP_837159.1	CDS	astD	NC_004741.1	1554103	1555581	D	a high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity; converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH; succinylglutamic semialdehyde dehydrogenase	1554103..1555581	Shigella flexneri 2a str. 2457T	1077920
NP_837160.1	CDS	ydjS	NC_004741.1	1556904	1557872	D	catalyzes the formation of succinate and glutamate from N(2)-succinylglutamate in arginine catabolism; succinylglutamate desuccinylase	1556904..1557872	Shigella flexneri 2a str. 2457T	1077994
NP_837161.1	CDS	spy	NC_004741.1	1558202	1558687	D	periplasmic protein induced by stress response via Cpx and BaeSR system; similar to CpxP; periplasmic protein	1558202..1558687	Shigella flexneri 2a str. 2457T	1077971
NP_837162.1	CDS	S1601	NC_004741.1	1558890	1559465	D	residues 1 to 191 of 191 are 98.42 pct identical to residues 22 to 212 of 212 from Escherichia coli K-12 : B1742; hypothetical protein	1558890..1559465	Shigella flexneri 2a str. 2457T	1077972
NP_837163.1	CDS	S1602	NC_004741.1	1559425	1560312	R	3' incision activity; acts with UvrC; nucleotide excision repair endonuclease	complement(1559425..1560312)	Shigella flexneri 2a str. 2457T	1077970
NP_837164.1	CDS	nadE	NC_004741.1	1560542	1561369	R	catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase	complement(1560542..1561369)	Shigella flexneri 2a str. 2457T	1077973
NP_837165.1	CDS	osmE	NC_004741.1	1561571	1561909	D	osmotically-inducible lipoprotein E; activator of ntr-like gene protein; DNA-binding transcriptional activator OsmE	1561571..1561909	Shigella flexneri 2a str. 2457T	1079640
NP_837166.1	CDS	celA	NC_004741.1	1562208	1562528	D	catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; involved in N,N'-diacetylchitobiose transport; N,N'-diacetylchitobiose-specific PTS system transporter subunit IIB	1562208..1562528	Shigella flexneri 2a str. 2457T	1077975
NP_837167.1	CDS	celC	NC_004741.1	1564020	1564370	D	catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; involved N,N'-diacetylchitobiose transport; N,N'-diacetylchitobiose-specific PTS system transporter subunit IIA	1564020..1564370	Shigella flexneri 2a str. 2457T	1077978
NP_837168.1	CDS	S1609	NC_004741.1	1565070	1565573	R	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri]; IS1 orfB	complement(1565070..1565573)	Shigella flexneri 2a str. 2457T	1077941
NP_837169.1	CDS	S1610	NC_004741.1	1565492	1565767	R	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(1565492..1565767)	Shigella flexneri 2a str. 2457T	1077980
NP_837170.1	CDS	celF	NC_004741.1	1566102	1567454	D	residues 1 to 450 of 450 are 98.44 pct identical to residues 1 to 450 of 450 from Escherichia coli K-12 : B1734; cryptic phospho-beta-glucosidase; cryptic	1566102..1567454	Shigella flexneri 2a str. 2457T	1079635
NP_837171.1	CDS	ydjC	NC_004741.1	1567467	1568225	D	residues 1 to 252 of 252 are 92.85 pct identical to residues 1 to 249 of 249 from Escherichia coli K-12 : B1733; hypothetical protein	1567467..1568225	Shigella flexneri 2a str. 2457T	1077981
NP_837172.1	CDS	katE	NC_004741.1	1568272	1570533	R	Catalase HPII; monofunctional catalase that decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide; hydroperoxidase II	complement(1568272..1570533)	Shigella flexneri 2a str. 2457T	1077829
NP_837173.1	CDS	S1614	NC_004741.1	1570716	1570979	D	residues 1 to 87 of 87 are 100.00 pct identical to residues 1 to 87 of 87 from Escherichia coli K-12 : B1731; cell division modulator	1570716..1570979	Shigella flexneri 2a str. 2457T	1077982
NP_837174.1	CDS	S1616	NC_004741.1	1572008	1572511	R	residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri]; IS1 orfB	complement(1572008..1572511)	Shigella flexneri 2a str. 2457T	1078001
NP_837175.1	CDS	S1617	NC_004741.1	1572430	1572705	R	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(1572430..1572705)	Shigella flexneri 2a str. 2457T	1077983
NP_837176.1	CDS	S1619	NC_004741.1	1574375	1574965	R	residues 1 to 196 of 196 are 100.00 pct identical to residues 5 to 200 of 200 from Escherichia coli K-12 : B1728; hypothetical protein	complement(1574375..1574965)	Shigella flexneri 2a str. 2457T	1077985
NP_837177.1	CDS	yniC	NC_004741.1	1575128	1575796	R	YniC; catalyzes the dephosphorylation of 2-deoxyglucose 6-phosphate, mannose 6-phosphate and p-nitrophenyl phosphate; 2-deoxyglucose-6-phosphatase	complement(1575128..1575796)	Shigella flexneri 2a str. 2457T	1077421
NP_837178.1	CDS	S1621	NC_004741.1	1575943	1576479	D	residues 1 to 178 of 178 are 98.87 pct identical to residues 1 to 178 of 178 from Escherichia coli K-12 : B1726; hypothetical protein	1575943..1576479	Shigella flexneri 2a str. 2457T	1077986
NP_837179.1	CDS	S1622	NC_004741.1	1576520	1577380	R	residues 1 to 286 of 286 are 99.30 pct identical to residues 1 to 286 of 286 from Escherichia coli K-12 : B1725; hypothetical protein	complement(1576520..1577380)	Shigella flexneri 2a str. 2457T	1080917
NP_837180.1	CDS	S1623	NC_004741.1	1577486	1577776	R	residues 1 to 96 of 96 are 98.95 pct identical to residues 1 to 96 of 96 from Escherichia coli K-12 : B1724; hypothetical protein	complement(1577486..1577776)	Shigella flexneri 2a str. 2457T	1077987
NP_837181.1	CDS	pfkB	NC_004741.1	1577877	1578806	R	residues 1 to 309 of 309 are 99.35 pct identical to residues 1 to 309 of 309 from Escherichia coli K-12 : B1723; suppressor of pfkA; 6-phosphofructokinase	complement(1577877..1578806)	Shigella flexneri 2a str. 2457T	1077958
NP_837182.1	CDS	S1625	NC_004741.1	1579126	1579851	D	residues 1 to 241 of 241 are 99.58 pct identical to residues 12 to 252 of 252 from Escherichia coli K-12 : B1722; hypothetical protein	1579126..1579851	Shigella flexneri 2a str. 2457T	1077989
NP_837183.1	CDS	S1627	NC_004741.1	1581158	1581661	R	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri]; IS1 orfB	complement(1581158..1581661)	Shigella flexneri 2a str. 2457T	1080915
NP_837184.1	CDS	S1628	NC_004741.1	1581580	1581855	R	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(1581580..1581855)	Shigella flexneri 2a str. 2457T	1077993
NP_837185.1	CDS	thrS	NC_004741.1	1582814	1584742	D	catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; threonyl-tRNA synthetase	1582814..1584742	Shigella flexneri 2a str. 2457T	1077996
NP_837186.1	CDS	infC	NC_004741.1	1584854	1585288	D	IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3	1584854..1585288	Shigella flexneri 2a str. 2457T	1077906
NP_837187.1	CDS	rpmI	NC_004741.1	1585385	1585582	D	residues 1 to 65 of 65 are 70.76 pct identical to residues 1 to 65 of 65 from Escherichia coli K-12 : B1717; 50S ribosomal protein L35	1585385..1585582	Shigella flexneri 2a str. 2457T	1077997
NP_837188.1	CDS	rplT	NC_004741.1	1585635	1585991	D	binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20	1585635..1585991	Shigella flexneri 2a str. 2457T	1077945
NP_837190.1	CDS	pheS	NC_004741.1	1586441	1587424	D	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha	1586441..1587424	Shigella flexneri 2a str. 2457T	1077999
NP_837191.1	CDS	pheT	NC_004741.1	1587439	1589826	D	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta	1587439..1589826	Shigella flexneri 2a str. 2457T	1079642
NP_837192.1	CDS	ihfA	NC_004741.1	1589831	1590130	D	This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit alpha	1589831..1590130	Shigella flexneri 2a str. 2457T	1078000
NP_837193.1	CDS	btuC	NC_004741.1	1590231	1591211	D	with BtuD and BtuF transports vitamin B12 into the cell; vtamin B12-transporter permease	1590231..1591211	Shigella flexneri 2a str. 2457T	1077953
NP_837194.1	CDS	btuE	NC_004741.1	1591274	1591825	D	similar to glutathione peroxidase; member of the btuCED operon which is required for vitamin B12 transport across the inner membrane; glutathione peroxidase	1591274..1591825	Shigella flexneri 2a str. 2457T	1078002
NP_837195.1	CDS	btuD	NC_004741.1	1591825	1592574	D	ATP-binding protein that acts with the transmembrane protein BtuC and the solute binding protein BtuF to transport vitamin B12 into the cell; vitamin B12-transporter ATPase	1591825..1592574	Shigella flexneri 2a str. 2457T	1078045
NP_837196.1	CDS	nlpC	NC_004741.1	1592652	1593116	D	residues 1 to 154 of 154 are 98.70 pct identical to residues 1 to 154 of 154 from Escherichia coli K-12 : B1708; lipoprotein	1592652..1593116	Shigella flexneri 2a str. 2457T	1078003
NP_837197.1	CDS	S1641	NC_004741.1	1593363	1594076	D	residues 1 to 237 of 237 are 97.04 pct identical to residues 1 to 237 of 237 from Escherichia coli K-12 : B1707; hypothetical protein	1593363..1594076	Shigella flexneri 2a str. 2457T	1077944
NP_837198.1	CDS	S1642	NC_004741.1	1594140	1595576	D	residues 1 to 478 of 478 are 97.69 pct identical to residues 1 to 478 of 478 from Escherichia coli K-12 : B1706; hypothetical protein	1594140..1595576	Shigella flexneri 2a str. 2457T	1078004
NP_837199.1	CDS	ydiE	NC_004741.1	1595580	1595771	R	residues 1 to 63 of 63 are 98.41 pct identical to residues 1 to 63 of 63 from Escherichia coli K-12 : B1705; hypothetical protein	complement(1595580..1595771)	Shigella flexneri 2a str. 2457T	1078047
NP_837200.1	CDS	aroH	NC_004741.1	1595903	1596949	R	tryptophan sensitive; catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate; phospho-2-dehydro-3-deoxyheptonate aldolase	complement(1595903..1596949)	Shigella flexneri 2a str. 2457T	1079648
NP_837201.1	CDS	ydiA	NC_004741.1	1597106	1597939	R	residues 1 to 277 of 277 are 95.66 pct identical to residues 1 to 277 of 277 from Escherichia coli K-12 : B1703; hypothetical protein	complement(1597106..1597939)	Shigella flexneri 2a str. 2457T	1078005
NP_837202.1	CDS	ppsA	NC_004741.1	1598272	1600650	D	catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase	1598272..1600650	Shigella flexneri 2a str. 2457T	1078033
NP_837203.1	CDS	ydiD	NC_004741.1	1600707	1602407	R	acts in anaerobic beta-oxidation of fatty acids; possible ligase/synthase involved in anaerobic growth on fatty acids; short chain acyl-CoA synthetase	complement(1600707..1602407)	Shigella flexneri 2a str. 2457T	1078007
NP_837204.1	CDS	ydiT	NC_004741.1	1602410	1602703	R	residues 1 to 97 of 97 are 95.87 pct identical to residues 1 to 97 of 97 from Escherichia coli K-12 : B1700; hypothetical protein	complement(1602410..1602703)	Shigella flexneri 2a str. 2457T	1078009
NP_837205.1	CDS	ydiS	NC_004741.1	1602700	1603989	R	residues 1 to 429 of 429 are 91.60 pct identical to residues 1 to 429 of 429 from Escherichia coli K-12 : B1699; hypothetical protein	complement(1602700..1603989)	Shigella flexneri 2a str. 2457T	1080916
NP_837206.1	CDS	ydiR	NC_004741.1	1604045	1604983	R	May play a role in a redox process; electron transfer flavoprotein subunit YdiR	complement(1604045..1604983)	Shigella flexneri 2a str. 2457T	1078010
NP_837207.1	CDS	ydiQ	NC_004741.1	1605003	1605767	R	YdiO, YdiQ, YdiR, YdiS, and YdiT may play a role in electron transport between the anaerobic fatty acid oxidation pathway and the respiratory chain; electron transfer flavoprotein YdiQ	complement(1605003..1605767)	Shigella flexneri 2a str. 2457T	1078011
NP_837208.1	CDS	S1652	NC_004741.1	1606086	1606586	D	residues 1 to 160 of 166 are 99.37 pct identical to residues 1 to 160 of 303 from Escherichia coli K-12 : B1696; ARAC-type regulatory protein	1606086..1606586	Shigella flexneri 2a str. 2457T	1078048
NP_837209.1	CDS	S1653	NC_004741.1	1607022	1607315	D	residues 1 to 97 of 97 are 81.44 pct identical to residues 35 to 131 of 131 from GenPept : >gb|AAL72404.1| (AF386526) transposase [Shigella flexneri 2a]; partial; IS1	1607022..1607315	Shigella flexneri 2a str. 2457T	1078014
NP_837210.1	CDS	S1654	NC_004741.1	1607878	1608639	R	regulates the cellular response to acid resistance; transcriptional regulator YdeO	complement(1607878..1608639)	Shigella flexneri 2a str. 2457T	1077977
NP_837211.1	CDS	S1655	NC_004741.1	1608707	1608910	R	residues 1 to 64 of 67 are 79.68 pct identical to residues 1 to 64 of 65 from Escherichia coli K-12 : B1500; hypothetical protein	complement(1608707..1608910)	Shigella flexneri 2a str. 2457T	1078015
NP_837212.1	CDS	S1656	NC_004741.1	1609158	1611437	R	in Escherichia coli it may be involved in repression of type III secretion system (TTSS) genes of the host cell; involved with increased resistance to low pH; member of the prokaryotic molybdopterin-containing oxidoreductase family; oxidoreductase	complement(1609158..1611437)	Shigella flexneri 2a str. 2457T	1077899
NP_837213.1	CDS	S1658	NC_004741.1	1612576	1612851	D	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	1612576..1612851	Shigella flexneri 2a str. 2457T	1078017
NP_837214.1	CDS	S1659	NC_004741.1	1612770	1613273	D	residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri]; IS1 orfB	1612770..1613273	Shigella flexneri 2a str. 2457T	1080949
NP_837215.1	CDS	S1660	NC_004741.1	1613481	1614194	D	residues 1 to 237 of 237 are 91.13 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAL72453.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS600 orfB	1613481..1614194	Shigella flexneri 2a str. 2457T	1078194
NP_837216.1	CDS	S1661	NC_004741.1	1614219	1614398	R	residues 1 to 59 of 59 are 67.79 pct identical to residues 1 to 59 of 71 from GenPept : >emb|CAC12891.1| (AJ279086) S protein [Shigella sonnei bacteriophage 7888]; lysis protein S of prophage CP-933V	complement(1614219..1614398)	Shigella flexneri 2a str. 2457T	1078019
NP_837217.1	CDS	S4818	NC_004741.1	1614706	1614909	R	residues 1 to 67 of 67 are 99.00 pct identical to residues 1 to 66 of 66 from NRprotein_Feb03 : >ref|NP_753340.1| Hypothetical protein [Escherichia coli CFT073] gb|AAN79900.1|AE016759_174 Hypothetical protein [Escherichia coli CFT073]; hypothetical protein	complement(1614706..1614909)	Shigella flexneri 2a str. 2457T	1078020
NP_837218.1	CDS	rus	NC_004741.1	1617635	1617991	R	residues 5 to 113 of 118 are 40.36 pct identical to residues 6 to 114 of 120 from Escherichia coli K-12 : B0550; endodeoxyribonuclease RUS (Holliday junction resolvase)	complement(1617635..1617991)	Shigella flexneri 2a str. 2457T	1078022
NP_837219.1	CDS	rem	NC_004741.1	1619400	1619648	R	residues 1 to 82 of 82 are 93.90 pct identical to residues 2 to 83 of 83 from Escherichia coli K-12 : B1561; hypothetical protein	complement(1619400..1619648)	Shigella flexneri 2a str. 2457T	1080999
NP_837220.1	CDS	relF	NC_004741.1	1619869	1620024	R	residues 1 to 51 of 51 are 100.00 pct identical to residues 1 to 51 of 51 from Escherichia coli K-12 : B1562; prophage maintenance protein	complement(1619869..1620024)	Shigella flexneri 2a str. 2457T	1078024
NP_837221.1	CDS	relE	NC_004741.1	1620096	1620383	R	residues 1 to 95 of 95 are 100.00 pct identical to residues 1 to 95 of 95 from Escherichia coli K-12 : B1563; hypothetical protein	complement(1620096..1620383)	Shigella flexneri 2a str. 2457T	1078018
NP_837222.1	CDS	relB	NC_004741.1	1620383	1620622	R	Qin prophage; bifunctional antitoxin of the RelE-RelB toxin-antitoxin system/transcriptional repressor; bifunctional antitoxin/transcriptional repressor RelB	complement(1620383..1620622)	Shigella flexneri 2a str. 2457T	1078025
NP_837223.1	CDS	b4285	NC_004741.1	1620682	1621308	R	residues 1 to 208 of 208 are 100.00 pct identical to residues 72 to 279 of 279 from GenPept : >gb|AAL72449.1| (AF386526) InsB [Shigella flexneri 2a]; partial; IS911 orfB	complement(1620682..1621308)	Shigella flexneri 2a str. 2457T	1078028
NP_837224.1	CDS	S1673	NC_004741.1	1621548	1621850	R	residues 1 to 100 of 100 are 100.00 pct identical to residues 13 to 112 of 112 from GenPept : >gb|AAL72382.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS911 orfA	complement(1621548..1621850)	Shigella flexneri 2a str. 2457T	1078032
NP_837225.1	CDS	S1675	NC_004741.1	1622201	1622914	R	residues 1 to 237 of 237 are 90.71 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAL72453.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS600 orfB	complement(1622201..1622914)	Shigella flexneri 2a str. 2457T	1078034
NP_837226.1	CDS	S1676	NC_004741.1	1623055	1623357	R	residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAL72452.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS600 orfA	complement(1623055..1623357)	Shigella flexneri 2a str. 2457T	1078055
NP_837227.1	CDS	ydfI	NC_004741.1	1624527	1625987	D	residues 1 to 486 of 486 are 98.35 pct identical to residues 1 to 486 of 486 from Escherichia coli K-12 : B1542; oxidoreductase	1624527..1625987	Shigella flexneri 2a str. 2457T	1078068
NP_837228.1	CDS	S1679	NC_004741.1	1626023	1626226	R	residues 1 to 67 of 67 are 100.00 pct identical to residues 1 to 67 of 67 from Escherichia coli K-12 : B1541; hypothetical protein	complement(1626023..1626226)	Shigella flexneri 2a str. 2457T	1078049
NP_837229.1	CDS	ydfH	NC_004741.1	1626404	1627090	R	residues 1 to 228 of 228 are 100.00 pct identical to residues 1 to 228 of 228 from Escherichia coli K-12 : B1540; hypothetical protein	complement(1626404..1627090)	Shigella flexneri 2a str. 2457T	1078036
NP_837230.1	CDS	ydfG	NC_004741.1	1627179	1627925	R	NADP(+)-dependent; catalyzes the formation of 2-aminomalonate-semialdehyde from L-serine; can also use 3-hydroxybutyrate, 3-hydroxy-isobutyrate, D-threonine, L-allo-threonine,D-serine; 3-hydroxy acid dehydrogenase	complement(1627179..1627925)	Shigella flexneri 2a str. 2457T	1076528
NP_837231.1	CDS	dcp	NC_004741.1	1628062	1630107	D	residues 1 to 681 of 681 are 94.71 pct identical to residues 1 to 681 of 681 from Escherichia coli K-12 : B1538; dipeptidyl carboxypeptidase II	1628062..1630107	Shigella flexneri 2a str. 2457T	1078037
NP_837232.1	CDS	ydeJ	NC_004741.1	1630152	1630670	R	residues 1 to 154 of 172 are 86.36 pct identical to residues 1 to 154 of 172 from Escherichia coli K-12 : B1537; competence damage-inducible protein A	complement(1630152..1630670)	Shigella flexneri 2a str. 2457T	1078012
NP_837233.1	CDS	ydeI	NC_004741.1	1630946	1631179	D	residues 1 to 75 of 77 are 97.33 pct identical to residues 1 to 75 of 130 from Escherichia coli K-12 : B1536; hypothetical protein	1630946..1631179	Shigella flexneri 2a str. 2457T	1078041
NP_837234.1	CDS	S1685	NC_004741.1	1631236	1631538	D	residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAL72452.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS600	1631236..1631538	Shigella flexneri 2a str. 2457T	1080479
NP_837235.1	CDS	S1686	NC_004741.1	1631679	1632392	D	residues 1 to 237 of 237 are 91.13 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAL72453.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS600	1631679..1632392	Shigella flexneri 2a str. 2457T	1078042
NP_837236.1	CDS	ydeF	NC_004741.1	1632862	1633980	R	residues 2 to 372 of 372 are 95.41 pct identical to residues 25 to 395 of 395 from Escherichia coli K-12 : B1534; transporter	complement(1632862..1633980)	Shigella flexneri 2a str. 2457T	1078043
NP_837237.2	CDS	ydeD	NC_004741.1	1634244	1635143	D	residues 1 to 266 of 266 are 98.87 pct identical to residues 1 to 266 of 266 from Escherichia coli K-12 : B1533; O-acetylserine/cysteine export protein	1634244..1635143	Shigella flexneri 2a str. 2457T	1078044
NP_837238.1	CDS	marB	NC_004741.1	1635174	1635392	R	residues 1 to 72 of 72 are 62.50 pct identical to residues 1 to 72 of 72 from Escherichia coli K-12 : B1532; hypothetical protein	complement(1635174..1635392)	Shigella flexneri 2a str. 2457T	1078635
NP_837239.1	CDS	marA	NC_004741.1	1635424	1635807	R	transcriptional activator of genes involved in the multiple antibiotic resistance (Mar) phenotype; also activates sodA, zwf and micF; DNA-binding transcriptional activator MarA	complement(1635424..1635807)	Shigella flexneri 2a str. 2457T	1078046
NP_837240.2	CDS	marR	NC_004741.1	1635827	1636261	R	Repressor of the marRAB operon which is involved in the activation of both antibiotic resistance and oxidative stress genes; DNA-binding transcriptional repressor MarR	complement(1635827..1636261)	Shigella flexneri 2a str. 2457T	1077964
NP_837241.1	CDS	ydeB	NC_004741.1	1636473	1637138	D	protein involved in resistance to different drugs (tetracycline, chloramphenicol, beta-lactams, and quinolones); part of the multiple antibiotic resistance (mar) locus, which is composed by the genes marC and marRAB; unknown function; multiple drug resistance protein MarC	1636473..1637138	Shigella flexneri 2a str. 2457T	1078050
NP_837242.1	CDS	ydeA	NC_004741.1	1637163	1638353	R	residues 1 to 396 of 396 are 87.12 pct identical to residues 1 to 396 of 396 from Escherichia coli K-12 : B1528; sugar efflux transporter	complement(1637163..1638353)	Shigella flexneri 2a str. 2457T	1078244
NP_837243.1	CDS	S1694	NC_004741.1	1638503	1639618	R	residues 1 to 371 of 371 are 96.76 pct identical to residues 1 to 371 of 371 from Escherichia coli K-12 : B1527; hypothetical protein	complement(1638503..1639618)	Shigella flexneri 2a str. 2457T	1078052
NP_837244.1	CDS	yneH	NC_004741.1	1640697	1641623	D	catalyzes the formation of glutamate from glutamine; glutaminase	1640697..1641623	Shigella flexneri 2a str. 2457T	1078061
NP_837245.1	CDS	S1697	NC_004741.1	1641623	1641967	D	residues 1 to 114 of 114 are 85.96 pct identical to residues 1 to 114 of 119 from Escherichia coli K-12 : B1523; hypothetical protein	1641623..1641967	Shigella flexneri 2a str. 2457T	1078057
NP_837246.1	CDS	S1698	NC_004741.1	1642592	1643539	D	residues 11 to 325 of 325 are 92.69 pct identical to residues 1 to 315 of 315 from Escherichia coli K-12 : B1522; hypothetical protein	1642592..1643539	Shigella flexneri 2a str. 2457T	1076937
NP_837247.1	CDS	uxaB	NC_004741.1	1643766	1645217	D	catalyzes the formation of D-tagaturonate from D-altronate; altronate oxidoreductase	1643766..1645217	Shigella flexneri 2a str. 2457T	1078058
NP_837248.1	CDS	S1701	NC_004741.1	1647060	1648025	D	residues 1 to 321 of 321 are 99.68 pct identical to residues 1 to 321 of 321 from Escherichia coli K-12 : B1520; hypothetical protein	1647060..1648025	Shigella flexneri 2a str. 2457T	1078745
NP_837249.1	CDS	S1702	NC_004741.1	1648029	1648787	R	catalyzes the formation of (E)-3-(methoxycarbonyl)pent-2-enedioate and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and trans-aconitate; trans-aconitate 2-methyltransferase	complement(1648029..1648787)	Shigella flexneri 2a str. 2457T	1078059
NP_837250.1	CDS	S1703	NC_004741.1	1648827	1649117	R	residues 1 to 96 of 96 are 98.95 pct identical to residues 1 to 96 of 96 from Escherichia coli K-12 : B1518; autoinducer-2 (AI-2) modifying protein LsrG	complement(1648827..1649117)	Shigella flexneri 2a str. 2457T	1078060
NP_837251.1	CDS	S1704	NC_004741.1	1649141	1649923	R	residues 1 to 260 of 260 are 98.46 pct identical to residues 32 to 291 of 291 from Escherichia coli K-12 : B1517; part of yneB; aldolase	complement(1649141..1649923)	Shigella flexneri 2a str. 2457T	1078175
NP_837252.2	CDS	S1705	NC_004741.1	1649936	1650841	R	IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats; insertion element IS2 transposase InsD	complement(1649936..1650841)	Shigella flexneri 2a str. 2457T	1080940
NP_837253.2	CDS	S1706	NC_004741.1	1650799	1651164	R	IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats; insertion sequence 2 OrfA protein	complement(1650799..1651164)	Shigella flexneri 2a str. 2457T	1078062
NP_837254.1	CDS	ydeW	NC_004741.1	1652321	1653274	R	residues 1 to 317 of 317 are 89.90 pct identical to residues 1 to 317 of 317 from Escherichia coli K-12 : B1512; sorC family transcriptional regulator	complement(1652321..1653274)	Shigella flexneri 2a str. 2457T	1078072
NP_837255.1	CDS	S1709	NC_004741.1	1653523	1655058	D	residues 1 to 511 of 511 are 98.43 pct identical to residues 1 to 511 of 511 from Escherichia coli K-12 : B1513; ATP-binding component of a transport system	1653523..1655058	Shigella flexneri 2a str. 2457T	1078065
NP_837256.1	CDS	ydeY	NC_004741.1	1655052	1656080	D	residues 1 to 342 of 342 are 83.62 pct identical to residues 1 to 342 of 342 from Escherichia coli K-12 : B1514; transport system permease	1655052..1656080	Shigella flexneri 2a str. 2457T	1078066
NP_837257.1	CDS	ydeZ	NC_004741.1	1656080	1657072	D	residues 1 to 330 of 330 are 76.36 pct identical to residues 1 to 330 of 330 from Escherichia coli K-12 : B1515; transport system permease	1656080..1657072	Shigella flexneri 2a str. 2457T	1079017
NP_837258.2	CDS	S1714	NC_004741.1	1658322	1658687	D	IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats; insertion sequence 2 OrfA protein	1658322..1658687	Shigella flexneri 2a str. 2457T	1078649
NP_837259.2	CDS	S1715	NC_004741.1	1658645	1659550	D	IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats; insertion element IS2 transposase InsD	1658645..1659550	Shigella flexneri 2a str. 2457T	1078070
NP_837260.1	CDS	S1716	NC_004741.1	1659600	1660412	R	residues 1 to 270 of 270 are 95.92 pct identical to residues 10 to 279 of 279 from GenPept : >gb|AAG53988.1|AF327445_2 (AF327445)  transposase B [Pantoea agglomerans]; ISEhe3 orfB	complement(1659600..1660412)	Shigella flexneri 2a str. 2457T	1078071
NP_837261.1	CDS	S1717	NC_004741.1	1660469	1660747	R	residues 1 to 92 of 92 are 92.39 pct identical to residues 3 to 94 of 94 from GenPept : >gb|AAG53987.1|AF327445_1 (AF327445)  transposase A [Pantoea agglomerans]; ISEhe3 orfA	complement(1660469..1660747)	Shigella flexneri 2a str. 2457T	1080569
NP_837262.1	CDS	rspA	NC_004741.1	1660824	1662038	R	residues 1 to 403 of 404 are 99.75 pct identical to residues 1 to 403 of 404 from Escherichia coli K-12 : B1581; starvation sensing protein	complement(1660824..1662038)	Shigella flexneri 2a str. 2457T	1078073
NP_837263.1	CDS	S1719	NC_004741.1	1662244	1662570	R	residues 1 to 108 of 108 are 99.07 pct identical to residues 1 to 108 of 108 from Escherichia coli K-12 : B1582; hypothetical protein	complement(1662244..1662570)	Shigella flexneri 2a str. 2457T	1078267
NP_837264.1	CDS	S1720	NC_004741.1	1662705	1663046	D	residues 1 to 113 of 113 are 89.38 pct identical to residues 1 to 113 of 113 from Escherichia coli K-12 : B1583; hypothetical protein	1662705..1663046	Shigella flexneri 2a str. 2457T	1078075
NP_837265.2	CDS	ynfC	NC_004741.1	1663644	1664354	R	residues 1 to 248 of 248 are 100.00 pct identical to residues 1 to 248 of 248 from Escherichia coli K-12 : B1585; hypothetical protein	complement(1663644..1664354)	Shigella flexneri 2a str. 2457T	1078076
NP_837266.1	CDS	S1723	NC_004741.1	1664462	1664767	D	residues 1 to 101 of 101 are 83.16 pct identical to residues 15 to 115 of 115 from Escherichia coli K-12 : B1586; hypothetical protein	1664462..1664767	Shigella flexneri 2a str. 2457T	1078077
NP_837267.1	CDS	S1727	NC_004741.1	1667110	1668099	R	residues 3 to 327 of 329 are 91.69 pct identical to residues 2 to 326 of 327 from GenPept : >emb|CAD02863.1| (AL627277) hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi]; hypothetical protein	complement(1667110..1668099)	Shigella flexneri 2a str. 2457T	1078947
NP_837268.1	CDS	S1728	NC_004741.1	1668186	1668677	R	residues 1 to 163 of 163 are 84.66 pct identical to residues 1 to 163 of 163 from GenPept : >emb|CAD02864.1| (AL627277) hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi]; hypothetical protein	complement(1668186..1668677)	Shigella flexneri 2a str. 2457T	1078518
NP_837269.1	CDS	S1730	NC_004741.1	1668998	1669498	R	no significant similarities; hypothetical protein	complement(1668998..1669498)	Shigella flexneri 2a str. 2457T	1078082
NP_837270.1	CDS	S1731	NC_004741.1	1669488	1670003	R	no significant similarities; hypothetical protein	complement(1669488..1670003)	Shigella flexneri 2a str. 2457T	1078661
NP_837271.1	CDS	S1732	NC_004741.1	1670434	1670802	R	no significant similarities; hypothetical protein	complement(1670434..1670802)	Shigella flexneri 2a str. 2457T	1078083
NP_837272.1	CDS	S1736	NC_004741.1	1671771	1672397	R	residues 1 to 208 of 208 are 100.00 pct identical to residues 72 to 279 of 279 from GenPept : >gb|AAL72449.1| (AF386526) InsB [Shigella flexneri 2a]; partial; IS911 orfB	complement(1671771..1672397)	Shigella flexneri 2a str. 2457T	1079394
NP_837273.1	CDS	S1738	NC_004741.1	1672637	1672939	R	residues 1 to 100 of 100 are 100.00 pct identical to residues 13 to 112 of 112 from GenPept : >gb|AAL72382.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS911 orfA	complement(1672637..1672939)	Shigella flexneri 2a str. 2457T	1078084
NP_837274.1	CDS	S1739	NC_004741.1	1673009	1673797	R	residues 4 to 193 of 262 are 27.77 pct identical to residues 57 to 243 of 548 from GenPept : >emb|CAD02867.1| (AL627277) possible integrase [Salmonella enterica subsp. enterica serovar Typhi]; integrase	complement(1673009..1673797)	Shigella flexneri 2a str. 2457T	1079680
NP_837275.1	CDS	S1742	NC_004741.1	1677248	1677865	D	residues 1 to 205 of 205 are 99.51 pct identical to residues 1 to 205 of 205 from Escherichia coli K-12 : B1589; oxidoreductase, Fe-S subunit	1677248..1677865	Shigella flexneri 2a str. 2457T	1078086
NP_837276.1	CDS	S1743	NC_004741.1	1677867	1678721	D	residues 1 to 284 of 284 are 90.49 pct identical to residues 1 to 284 of 284 from Escherichia coli K-12 : B1590; DMSO reductase anchor subunit	1677867..1678721	Shigella flexneri 2a str. 2457T	1078091
NP_837277.1	CDS	S1744	NC_004741.1	1678764	1679378	D	binds to the twin-arginine signal peptides of certain proteins, including dimethylsulfoxide reductase and trimethylamine N-oxide reductase that are translocated to the cytoplasmic membrane; twin-argninine leader-binding protein DmsD	1678764..1679378	Shigella flexneri 2a str. 2457T	1078074
NP_837278.2	CDS	S1745	NC_004741.1	1679573	1680829	D	residues 1 to 438 of 438 are 81.05 pct identical to residues 1 to 438 of 438 from Escherichia coli K-12 : B1592; voltage-gated ClC-type chloride channel ClcB	1679573..1680829	Shigella flexneri 2a str. 2457T	1078087
NP_837279.1	CDS	bioD	NC_004741.1	1680782	1681477	R	DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase	complement(1680782..1681477)	Shigella flexneri 2a str. 2457T	1077932
NP_837280.1	CDS	mlc	NC_004741.1	1681602	1682822	R	residues 1 to 406 of 406 are 99.26 pct identical to residues 1 to 406 of 406 from Escherichia coli K-12 : B1594; NAGC-like transcriptional regulator	complement(1681602..1682822)	Shigella flexneri 2a str. 2457T	1078093
NP_837281.1	CDS	ynfL	NC_004741.1	1682957	1683868	R	residues 1 to 303 of 303 are 94.71 pct identical to residues 1 to 297 of 297 from Escherichia coli K-12 : B1595; LYSR-type transcriptional regulator	complement(1682957..1683868)	Shigella flexneri 2a str. 2457T	1077942
NP_837282.2	CDS	asr	NC_004741.1	1685652	1685960	D	required for growth and survival under moderately acid conditions; acid shock protein precursor	1685652..1685960	Shigella flexneri 2a str. 2457T	1076487
NP_837283.1	CDS	S1751	NC_004741.1	1686236	1687057	D	residues 1 to 273 of 273 are 99.26 pct identical to residues 1 to 273 of 273 from Escherichia coli K-12 : B1598; hypothetical protein	1686236..1687057	Shigella flexneri 2a str. 2457T	1078095
NP_837284.1	CDS	S1752	NC_004741.1	1687096	1687425	R	with MdtJ is involved in resistance to deoxycholate, nalidixic acid, fosfomycin, and SDS; multidrug efflux system protein MdtI	complement(1687096..1687425)	Shigella flexneri 2a str. 2457T	1078134
NP_837285.1	CDS	S1753	NC_004741.1	1687412	1687777	R	with MdtI is involved in resistance to deoxycholate , nalidixic acid, fosfomycin, and SDS; multidrug efflux system protein MdtJ	complement(1687412..1687777)	Shigella flexneri 2a str. 2457T	1078097
NP_837286.1	CDS	tqsA	NC_004741.1	1688188	1689222	D	transport of quorum-sensing signal; mutations in this gene alters the transport of the quorum-sensing signal autoinducer 2 (AI-2) which affects expression of a large number of genes; transporter	1688188..1689222	Shigella flexneri 2a str. 2457T	1077069
NP_837287.1	CDS	pntB	NC_004741.1	1689247	1690635	R	catalyzes reversible transfer of hydride ion equivalent between NAD and NADP; membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane; forms a tetramer composed of two alpha and 2 beta subunits; AB-stereospecific enzyme; pyridine nucleotide transhydrogenase	complement(1689247..1690635)	Shigella flexneri 2a str. 2457T	1078098
NP_837288.1	CDS	pntA	NC_004741.1	1690646	1692193	R	forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane; involved in catalyzing transfer of hydride ion equivalents between NAD and NADP; stereospecific (AB-specific); functions as a proton pump by translocating protons from cytoplasm to periplasm; NAD(P) transhydrogenase subunit alpha	complement(1690646..1692193)	Shigella flexneri 2a str. 2457T	1078099
NP_837289.1	CDS	S1757	NC_004741.1	1692702	1693646	D	residues 1 to 314 of 314 are 88.53 pct identical to residues 1 to 314 of 314 from Escherichia coli K-12 : B1604; hypothetical protein	1692702..1693646	Shigella flexneri 2a str. 2457T	1078132
NP_837290.1	CDS	S1758	NC_004741.1	1693832	1695214	D	residues 1 to 460 of 460 are 95.86 pct identical to residues 1 to 460 of 460 from Escherichia coli K-12 : B1605; arginine/ornithine antiporter	1693832..1695214	Shigella flexneri 2a str. 2457T	1078100
NP_837291.1	CDS	ydgB	NC_004741.1	1695251	1695973	D	residues 1 to 240 of 240 are 92.50 pct identical to residues 1 to 240 of 240 from Escherichia coli K-12 : B1606; short chain dehydrogenase	1695251..1695973	Shigella flexneri 2a str. 2457T	1078448
NP_837292.1	CDS	ydgC	NC_004741.1	1695970	1696305	R	residues 23 to 111 of 111 are 100.00 pct identical to residues 23 to 111 of 111 from Escherichia coli K-12 : B1607; hypothetical protein	complement(1695970..1696305)	Shigella flexneri 2a str. 2457T	1078101
NP_837293.1	CDS	rstA	NC_004741.1	1696434	1697177	D	response regulator in two-component regulatory system with RstB; DNA-binding transcriptional regulator RstA	1696434..1697177	Shigella flexneri 2a str. 2457T	1077974
NP_837294.1	CDS	S1762	NC_004741.1	1697675	1698721	D	residues 1 to 345 of 348 are 70.43 pct identical to residues 100 to 444 of 448 from GenPept : >emb|CAD01997.1| (AL627271)  transporter [Salmonella enterica subsp. enterica serovar Typhi]; transporter	1697675..1698721	Shigella flexneri 2a str. 2457T	1078102
NP_837295.1	CDS	rstB	NC_004741.1	1698900	1700201	D	residues 1 to 433 of 433 are 95.61 pct identical to residues 1 to 433 of 433 from Escherichia coli K-12 : B1609; sensor protein RstB	1698900..1700201	Shigella flexneri 2a str. 2457T	1078026
NP_837296.1	CDS	tus	NC_004741.1	1700277	1701206	D	binds to DNA replication terminator sequences to prevent passage of replication forks; DNA replication terminus site-binding protein	1700277..1701206	Shigella flexneri 2a str. 2457T	1079681
NP_837297.1	CDS	fumC	NC_004741.1	1701203	1702606	R	class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase	complement(1701203..1702606)	Shigella flexneri 2a str. 2457T	1078103
NP_837298.1	CDS	fumA	NC_004741.1	1702749	1704395	R	residues 1 to 548 of 548 are 99.63 pct identical to residues 1 to 548 of 548 from Escherichia coli K-12 : B1612; fumarase A, fumarate hydratase class I; aerobic isozyme	complement(1702749..1704395)	Shigella flexneri 2a str. 2457T	1078104
NP_837299.1	CDS	manA	NC_004741.1	1704594	1705769	D	residues 1 to 391 of 391 are 99.48 pct identical to residues 1 to 391 of 391 from Escherichia coli K-12 : B1613; mannose-6-phosphate isomerase	1704594..1705769	Shigella flexneri 2a str. 2457T	1078039
NP_837300.1	CDS	ydgA	NC_004741.1	1705870	1707345	D	residues 1 to 487 of 491 are 93.83 pct identical to residues 1 to 487 of 502 from Escherichia coli K-12 : B1614; hypothetical protein	1705870..1707345	Shigella flexneri 2a str. 2457T	1078106
NP_837301.2	CDS	uidC	NC_004741.1	1707605	1708870	R	residues 1 to 415 of 415 are 98.55 pct identical to residues 3 to 417 of 417 from Escherichia coli K-12 : B1615; outer membrane porin protein	complement(1707605..1708870)	Shigella flexneri 2a str. 2457T	1078107
NP_837302.1	CDS	uidA	NC_004741.1	1709940	1711643	R	residues 1 to 566 of 567 are 99.46 pct identical to residues 1 to 566 of 603 from Escherichia coli K-12 : B1617; beta-D-glucuronidase	complement(1709940..1711643)	Shigella flexneri 2a str. 2457T	1078109
NP_837303.1	CDS	uidR	NC_004741.1	1712031	1712621	R	residues 1 to 196 of 196 are 100.00 pct identical to residues 1 to 196 of 196 from Escherichia coli K-12 : B1618; repressor for uid operon	complement(1712031..1712621)	Shigella flexneri 2a str. 2457T	1078111
NP_837304.1	CDS	S1774	NC_004741.1	1713026	1713529	R	residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri]; IS1 orfB	complement(1713026..1713529)	Shigella flexneri 2a str. 2457T	1078116
NP_837305.1	CDS	S1775	NC_004741.1	1713448	1713723	R	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(1713448..1713723)	Shigella flexneri 2a str. 2457T	1078533
NP_837306.1	CDS	malI	NC_004741.1	1714506	1715534	R	regulates malXY which are involved in maltose-glucose transport; DNA-binding transcriptional repressor MalI	complement(1714506..1715534)	Shigella flexneri 2a str. 2457T	1078117
NP_837307.1	CDS	malX	NC_004741.1	1715709	1717301	D	phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS); catalyzes the phosphorylation of maltose and glucose concomitant with their translocation across the cell membrane; component IIB catalyzes the phosphorylation of the sugar molecule; IIC forms the translocation channel and contains the substrate specific binding site; bifunctional maltose and glucose-specific PTS system components IICB	1715709..1717301	Shigella flexneri 2a str. 2457T	1080903
NP_837308.1	CDS	malY	NC_004741.1	1717311	1718483	D	residues 1 to 390 of 390 are 98.71 pct identical to residues 1 to 390 of 390 from Escherichia coli K-12 : B1622; cystathionine beta-lyase; maltose regulon modulator	1717311..1718483	Shigella flexneri 2a str. 2457T	1078118
NP_837309.1	CDS	add	NC_004741.1	1718587	1719588	D	catalyzes the formation of inosine from adenosine; adenosine deaminase	1718587..1719588	Shigella flexneri 2a str. 2457T	1078119
NP_837310.2	CDS	S1781	NC_004741.1	1719624	1720664	R	residues 1 to 359 of 359 are 94.42 pct identical to residues 1 to 359 of 359 from Escherichia coli K-12 : B1624; oxidoreductase	complement(1719624..1720664)	Shigella flexneri 2a str. 2457T	1078198
NP_837311.1	CDS	S1782	NC_004741.1	1721305	1721520	D	YdgT; in E. coli, when complexed with H-NS or StpA binds a 26 base-pair DNA sequence of oriC; seems to play a role in optimizing the activity of oriC; non-essential; Hha protein paralog; in an hha mutant background, cnu is overexpressed and can compensate hha-induced phenotypes; oriC-binding nucleoid-associated protein	1721305..1721520	Shigella flexneri 2a str. 2457T	1078120
NP_837312.1	CDS	S1783	NC_004741.1	1721606	1722046	D	residues 1 to 146 of 146 are 79.45 pct identical to residues 9 to 154 of 154 from Escherichia coli K-12 : B1626; hypothetical protein	1721606..1722046	Shigella flexneri 2a str. 2457T	1078122
NP_837313.1	CDS	S1784	NC_004741.1	1722123	1722704	D	residues 1 to 193 of 193 are 92.22 pct identical to residues 1 to 193 of 193 from Escherichia coli K-12 : B1627; Na(+)-translocating NADH-quinone reductase subunit E	1722123..1722704	Shigella flexneri 2a str. 2457T	1078123
NP_837314.1	CDS	S1785	NC_004741.1	1722704	1723282	D	part of membrane-bound complex thought to be involved in electron transport to nitrogen; electron transport complex protein RnfB	1722704..1723282	Shigella flexneri 2a str. 2457T	1078124
NP_837315.1	CDS	S1786	NC_004741.1	1723275	1725497	D	part of membrane-bound complex thought to be involved in electron transport to nitrogen; electron transport complex protein RnfC	1723275..1725497	Shigella flexneri 2a str. 2457T	1079775
NP_837316.1	CDS	rnfD	NC_004741.1	1725498	1726556	D	RnfD; RsxD; required for nitrogen fixation in Rhodobacter capsulatus; part of a membrane-bound complex thought to be involved in electron transport to nitrogenase; in Escherichia coli this gene is part of a cluster controlling SoxR-mediated induction of the SoxS transcription factor in the absence of oxidizing agents; electron transport complex protein RnfD	1725498..1726556	Shigella flexneri 2a str. 2457T	1078125
NP_837317.1	CDS	S1788	NC_004741.1	1726560	1727180	D	part of membrane-bound complex hought to be involved in electron transport to nitrogen; electron transport complex protein RnfG	1726560..1727180	Shigella flexneri 2a str. 2457T	1079417
NP_837318.1	CDS	ydgQ	NC_004741.1	1727184	1727879	D	in Excherichia coli RsxABCDEG reduces SoxR which turns off induction of SoxS transcription factor in the absence of oxidizing agents; similar to the rnfABCDGE operon in Rhodobacter capsulatus involved in transferring electrons to nitrogenase; electron transport complex RsxE subunit	1727184..1727879	Shigella flexneri 2a str. 2457T	1078126
NP_837319.1	CDS	nth	NC_004741.1	1727879	1728514	D	DNA-(apurinic or apyrimidinic site) lyase; has apurinic or apyrimidinic endonuclease activity and DNA N-glycosylase activity; removed damaged DNA at cytosines, thymines and guanines; endonuclease III	1727879..1728514	Shigella flexneri 2a str. 2457T	1078128
NP_837320.1	CDS	tppB	NC_004741.1	1729125	1730627	D	mutations in this gene confer resistance to the toxic peptide alafosfalin in Salmonella typhimurium; member of proton-dependent oligopeptide transport (POT) system family; in Escherichia coli this gene is regulated by OmpR although not via osmoregulation; tripeptide transporter permease	1729125..1730627	Shigella flexneri 2a str. 2457T	1078129
NP_837321.1	CDS	gst	NC_004741.1	1730733	1731338	D	residues 1 to 201 of 201 are 93.03 pct identical to residues 1 to 201 of 201 from Escherichia coli K-12 : B1635; glutathionine S-transferase	1730733..1731338	Shigella flexneri 2a str. 2457T	1080553
NP_837322.1	CDS	pdxY	NC_004741.1	1731382	1732245	R	catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal; pyridoxamine kinase	complement(1731382..1732245)	Shigella flexneri 2a str. 2457T	1078130
NP_837323.1	CDS	tyrS	NC_004741.1	1732304	1733578	R	catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase	complement(1732304..1733578)	Shigella flexneri 2a str. 2457T	1078131
NP_837324.1	CDS	pdxH	NC_004741.1	1733707	1734363	R	catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate; pyridoxamine 5'-phosphate oxidase	complement(1733707..1734363)	Shigella flexneri 2a str. 2457T	1078135
NP_837325.1	CDS	ydhA	NC_004741.1	1734422	1734670	R	residues 1 to 82 of 82 are 96.34 pct identical to residues 1 to 82 of 82 from Escherichia coli K-12 : B1639; hypothetical protein	complement(1734422..1734670)	Shigella flexneri 2a str. 2457T	1078137
NP_837326.2	CDS	S1797	NC_004741.1	1734692	1735597	R	IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats; insertion element IS2 transposase InsD	complement(1734692..1735597)	Shigella flexneri 2a str. 2457T	1078140
NP_837327.2	CDS	S1798	NC_004741.1	1735555	1735920	R	IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats; insertion sequence 2 OrfA protein	complement(1735555..1735920)	Shigella flexneri 2a str. 2457T	1078141
NP_837328.1	CDS	anmK	NC_004741.1	1736185	1737294	R	catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase	complement(1736185..1737294)	Shigella flexneri 2a str. 2457T	1078133
NP_837329.1	CDS	slyB	NC_004741.1	1737568	1738035	D	residues 1 to 155 of 155 are 65.16 pct identical to residues 1 to 155 of 155 from Escherichia coli K-12 : B1641; outer membrane protein	1737568..1738035	Shigella flexneri 2a str. 2457T	1078143
NP_837330.2	CDS	slyA	NC_004741.1	1738082	1738516	R	Transcription regulator that can both activate or repress expression; transcriptional regulator SlyA	complement(1738082..1738516)	Shigella flexneri 2a str. 2457T	1077305
NP_837331.1	CDS	S1802	NC_004741.1	1738717	1738953	D	residues 1 to 78 of 78 are 84.61 pct identical to residues 1 to 78 of 78 from Escherichia coli K-12 : B1643; hypothetical protein	1738717..1738953	Shigella flexneri 2a str. 2457T	1078144
NP_837332.1	CDS	S1803	NC_004741.1	1738947	1739813	D	residues 1 to 288 of 288 are 97.56 pct identical to residues 12 to 299 of 299 from Escherichia coli K-12 : B1644; hypothetical protein	1738947..1739813	Shigella flexneri 2a str. 2457T	1079324
NP_837333.1	CDS	sodC	NC_004741.1	1741826	1742362	R	SodC; copper and zinc binding; converts superoxide radicals to hydrogen peroxide and water; superoxide dismutase	complement(1741826..1742362)	Shigella flexneri 2a str. 2457T	1079362
NP_837334.1	CDS	S1806	NC_004741.1	1742428	1743324	R	residues 1 to 298 of 298 are 93.95 pct identical to residues 1 to 298 of 298 from Escherichia coli K-12 : B1647; hypothetical protein	complement(1742428..1743324)	Shigella flexneri 2a str. 2457T	1078146
NP_837335.1	CDS	S1808	NC_004741.1	1743373	1743750	R	residues 1 to 125 of 125 are 100.00 pct identical to residues 1 to 125 of 125 from Escherichia coli K-12 : B1648; hypothetical protein	complement(1743373..1743750)	Shigella flexneri 2a str. 2457T	1078180
NP_837336.1	CDS	S1807	NC_004741.1	1743715	1744314	D	residues 1 to 199 of 199 are 99.49 pct identical to residues 1 to 199 of 199 from Escherichia coli K-12 : B1649; hypothetical protein	1743715..1744314	Shigella flexneri 2a str. 2457T	1078148
NP_837337.1	CDS	nemA	NC_004741.1	1744351	1745448	D	FMN-linked; catalyzes the formation of N-ethylsuccinimide from N-ethylmaleimide; N-ethylmaleimide reductase	1744351..1745448	Shigella flexneri 2a str. 2457T	1078459
NP_837338.1	CDS	gloA	NC_004741.1	1745529	1745936	D	Ni-dependent; catalyzes the formation of S-lactoylglutathione from methylglyoxal and glutathione; glyoxalase I	1745529..1745936	Shigella flexneri 2a str. 2457T	1078150
NP_837339.1	CDS	rnt	NC_004741.1	1746039	1746686	D	Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A); ribonuclease T	1746039..1746686	Shigella flexneri 2a str. 2457T	1078069
NP_837340.1	CDS	S1813	NC_004741.1	1751281	1752429	R	residues 1 to 382 of 382 are 96.85 pct identical to residues 21 to 402 of 402 from Escherichia coli K-12 : B1432; virulence protein	complement(1751281..1752429)	Shigella flexneri 2a str. 2457T	1078527
NP_837341.1	CDS	ydhD	NC_004741.1	1753036	1753383	R	residues 1 to 115 of 115 are 100.00 pct identical to residues 1 to 115 of 115 from Escherichia coli K-12 : B1654; hypothetical protein	complement(1753036..1753383)	Shigella flexneri 2a str. 2457T	1078152
NP_837342.1	CDS	ydhO	NC_004741.1	1753718	1754545	D	residues 1 to 275 of 275 are 79.63 pct identical to residues 1 to 271 of 271 from Escherichia coli K-12 : B1655; lipoprotein	1753718..1754545	Shigella flexneri 2a str. 2457T	1078154
NP_837343.1	CDS	sodB	NC_004741.1	1754673	1755254	D	SodB; iron binding; present under aerobic and anaerobic conditions; destroys free radicals; superoxide dismutase	1754673..1755254	Shigella flexneri 2a str. 2457T	1079354
NP_837344.1	CDS	S1817	NC_004741.1	1755400	1756569	R	residues 1 to 389 of 389 are 86.63 pct identical to residues 1 to 389 of 389 from Escherichia coli K-12 : B1657; transporter	complement(1755400..1756569)	Shigella flexneri 2a str. 2457T	1078155
NP_837345.1	CDS	purR	NC_004741.1	1757123	1758148	D	binds to the purF operator and coregulates other genes for de novo purine nucleotide synthesis; is involved in regulation of purB, purC, purEK, purHD, purL, purMN and guaBA expression; binds hypoxanthine and guanine as inducers; DNA-binding transcriptional repressor PurR	1757123..1758148	Shigella flexneri 2a str. 2457T	1078157
NP_837346.1	CDS	ydhB	NC_004741.1	1758145	1759077	R	residues 1 to 310 of 310 are 99.35 pct identical to residues 1 to 310 of 310 from Escherichia coli K-12 : B1659; DNA-binding transcriptional regulator	complement(1758145..1759077)	Shigella flexneri 2a str. 2457T	1079785
NP_837347.1	CDS	ydhC	NC_004741.1	1759190	1760401	D	uncharacterized member of the major facilitator superfamily (MFS); inner membrane transport protein YdhC	1759190..1760401	Shigella flexneri 2a str. 2457T	1078158
NP_837348.1	CDS	cfa	NC_004741.1	1760692	1761840	D	catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge; cyclopropane-fatty-acyl-phospholipid synthase	1760692..1761840	Shigella flexneri 2a str. 2457T	1080927
NP_837349.1	CDS	ribE	NC_004741.1	1761880	1762521	R	catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha	complement(1761880..1762521)	Shigella flexneri 2a str. 2457T	1078160
NP_837350.1	CDS	ydhE	NC_004741.1	1762736	1764109	D	NorM; MdtK; functions as a Na(+)/drug antiporter; inactivation in Vibrio cholerae results in susceptibility to fluoroquinolones; multidrug efflux protein	1762736..1764109	Shigella flexneri 2a str. 2457T	1079330
NP_837351.1	CDS	S1824	NC_004741.1	1764150	1765406	R	residues 1 to 418 of 418 are 98.56 pct identical to residues 1 to 418 of 418 from Escherichia coli K-12 : B1664; hypothetical protein	complement(1764150..1765406)	Shigella flexneri 2a str. 2457T	1078161
NP_837352.1	CDS	S1827	NC_004741.1	1765979	1766284	D	residues 1 to 101 of 101 are 100.00 pct identical to residues 1 to 101 of 101 from Escherichia coli K-12 : B1667; hypothetical protein	1765979..1766284	Shigella flexneri 2a str. 2457T	1078163
NP_837353.1	CDS	S1829	NC_004741.1	1767844	1768656	R	residues 1 to 270 of 270 are 92.96 pct identical to residues 1 to 270 of 270 from Escherichia coli K-12 : B1669; hypothetical protein	complement(1767844..1768656)	Shigella flexneri 2a str. 2457T	1078164
NP_837354.1	CDS	ydhU	NC_004741.1	1768660	1769445	R	residues 1 to 261 of 261 are 80.45 pct identical to residues 1 to 261 of 261 from Escherichia coli K-12 : B1670; hypothetical protein	complement(1768660..1769445)	Shigella flexneri 2a str. 2457T	1078165
NP_837355.1	CDS	S1831	NC_004741.1	1769442	1770161	R	residues 1 to 239 of 239 are 98.74 pct identical to residues 1 to 239 of 239 from Escherichia coli K-12 : B1671; oxidoreductase, Fe-S subunit	complement(1769442..1770161)	Shigella flexneri 2a str. 2457T	1078166
NP_837356.1	CDS	S1832	NC_004741.1	1770174	1770812	R	residues 1 to 212 of 212 are 87.26 pct identical to residues 4 to 215 of 215 from Escherichia coli K-12 : B1672; hypothetical protein	complement(1770174..1770812)	Shigella flexneri 2a str. 2457T	1078172
NP_837357.1	CDS	S1834	NC_004741.1	1772947	1773573	R	residues 1 to 208 of 208 are 91.82 pct identical to residues 1 to 208 of 208 from Escherichia coli K-12 : B1674; hypothetical protein	complement(1772947..1773573)	Shigella flexneri 2a str. 2457T	1078173
NP_837358.1	CDS	S1835	NC_004741.1	1774029	1774238	R	residues 1 to 69 of 69 are 100.00 pct identical to residues 1 to 69 of 69 from Escherichia coli K-12 : B1675; hypothetical protein	complement(1774029..1774238)	Shigella flexneri 2a str. 2457T	1078168
NP_837359.1	CDS	S1836	NC_004741.1	1774325	1774600	D	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	1774325..1774600	Shigella flexneri 2a str. 2457T	1078169
NP_837360.1	CDS	S1837	NC_004741.1	1774519	1775022	D	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri]; IS1 orfB	1774519..1775022	Shigella flexneri 2a str. 2457T	1077564
NP_837361.1	CDS	pykF	NC_004741.1	1775571	1776983	D	catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase	1775571..1776983	Shigella flexneri 2a str. 2457T	1078170
NP_837362.1	CDS	lpp	NC_004741.1	1777294	1777530	D	residues 1 to 78 of 78 are 100.00 pct identical to residues 1 to 78 of 78 from Escherichia coli K-12 : B1677; murein lipoprotein	1777294..1777530	Shigella flexneri 2a str. 2457T	1079288
NP_837363.1	CDS	ynhG	NC_004741.1	1777593	1778597	R	residues 1 to 334 of 334 are 99.70 pct identical to residues 1 to 334 of 334 from Escherichia coli K-12 : B1678; hypothetical protein	complement(1777593..1778597)	Shigella flexneri 2a str. 2457T	1078171
NP_837364.1	CDS	ynhA	NC_004741.1	1778746	1779162	R	Acts with SufS to catalyze the formation of L-alanine from L-cysteine; cysteine desufuration protein SufE	complement(1778746..1779162)	Shigella flexneri 2a str. 2457T	1077573
NP_837365.1	CDS	S1842	NC_004741.1	1779175	1780395	R	catalyzes the formation of L-alanine and selenide or sulfanylcysteine from selenocysteine or cysteine; bifunctional cysteine desulfurase/selenocysteine lyase	complement(1779175..1780395)	Shigella flexneri 2a str. 2457T	1078174
NP_837366.1	CDS	ynhC	NC_004741.1	1780392	1781663	R	with SufBC activates cysteine desulfurase SufS; cysteine desulfurase activator complex subunit SufD	complement(1780392..1781663)	Shigella flexneri 2a str. 2457T	1078176
NP_837367.1	CDS	sufC	NC_004741.1	1781638	1782384	R	part of SUF system involved in inserting iron-sulfur clusters into proteins; in Escherichia coli this protein forms a complex with SufBD; the SufBCD complex stimulates the cysteine desulfurase SufS in conjunction with SufE; cysteine desulfurase	complement(1781638..1782384)	Shigella flexneri 2a str. 2457T	1078186
NP_837368.1	CDS	ynhE	NC_004741.1	1782394	1783881	R	with SufCD activates cysteine desulfurase SufS; cysteine desulfurase activator complex subunit SufB	complement(1782394..1783881)	Shigella flexneri 2a str. 2457T	1078177
NP_837369.1	CDS	sufA	NC_004741.1	1783890	1784258	R	functions as a scaffold on which iron-sulfur clusters ([2Fe-2S]; [4Fe-4S]) are assembled; forms a homodimer; similar to IscA protein; iron-sulfur cluster assembly scaffold protein	complement(1783890..1784258)	Shigella flexneri 2a str. 2457T	1078178
NP_837370.1	CDS	S1847	NC_004741.1	1784806	1785075	R	residues 1 to 89 of 89 are 100.00 pct identical to residues 1 to 89 of 89 from Escherichia coli K-12 : B1685; hypothetical protein	complement(1784806..1785075)	Shigella flexneri 2a str. 2457T	1078179
NP_837371.1	CDS	S1848	NC_004741.1	1785094	1785504	R	residues 1 to 136 of 136 are 99.26 pct identical to residues 1 to 136 of 136 from Escherichia coli K-12 : B1686; hypothetical protein	complement(1785094..1785504)	Shigella flexneri 2a str. 2457T	1078181
NP_837372.1	CDS	ydiJ	NC_004741.1	1785501	1788557	R	residues 1 to 1018 of 1018 are 97.54 pct identical to residues 1 to 1018 of 1018 from Escherichia coli K-12 : B1687; oxidase	complement(1785501..1788557)	Shigella flexneri 2a str. 2457T	1078426
NP_837373.1	CDS	S1850	NC_004741.1	1788946	1790058	D	YdiK; inner membrane protein; ydiK promoter presents a PurR sequence, suggesting that its expression is purine-regulated; unknown function; inner membrane protein	1788946..1790058	Shigella flexneri 2a str. 2457T	1078184
NP_837374.1	CDS	S1851	NC_004741.1	1790487	1790843	D	residues 1 to 118 of 118 are 98.30 pct identical to residues 10 to 127 of 127 from Escherichia coli K-12 : B1689; hypothetical protein	1790487..1790843	Shigella flexneri 2a str. 2457T	1078183
NP_837375.1	CDS	S1852	NC_004741.1	1791003	1792148	D	residues 1 to 381 of 381 are 98.43 pct identical to residues 21 to 404 of 404 from Escherichia coli K-12 : B1690; transport system permease	1791003..1792148	Shigella flexneri 2a str. 2457T	1079788
NP_837376.1	CDS	S1853	NC_004741.1	1792442	1793602	D	residues 1 to 386 of 386 are 91.19 pct identical to residues 38 to 423 of 423 from Escherichia coli K-12 : B1691; amino acid/amine transport protein	1792442..1793602	Shigella flexneri 2a str. 2457T	1078185
NP_837377.1	CDS	aroE	NC_004741.1	1793614	1794480	D	YdiB; quinate/shikimate dehydrogenase from Escherichia coli uses both NAD and NAD(P) to convert quinate and shikimate to 3-dehydroquinate and 3-dehydroshikimate; quinate/shikimate dehydrogenase	1793614..1794480	Shigella flexneri 2a str. 2457T	1079284
NP_837378.1	CDS	aroD	NC_004741.1	1794511	1795269	D	catalyzes the dehydration of 3-dehydroquinate to form 3-dehydroshikimate in aromatic amino acid biosynthesis; 3-dehydroquinate dehydratase	1794511..1795269	Shigella flexneri 2a str. 2457T	1078189
NP_837379.1	CDS	S1857	NC_004741.1	1795351	1795854	R	residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri]; IS1 orfB	complement(1795351..1795854)	Shigella flexneri 2a str. 2457T	1078190
NP_837380.1	CDS	S1856	NC_004741.1	1795773	1796048	R	residues 49 to 88 of 88 are 97.50 pct identical to residues 1 to 40 of 100 from GenPept : >gb|AAL72519.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS1 orfA	complement(1795773..1796048)	Shigella flexneri 2a str. 2457T	1078191
NP_837381.1	CDS	S1859	NC_004741.1	1797701	1798858	D	residues 1 to 385 of 385 are 99.22 pct identical to residues 6 to 390 of 390 from Escherichia coli K-12 : B1497; enzyme	1797701..1798858	Shigella flexneri 2a str. 2457T	1078263
NP_837382.1	CDS	yddB	NC_004741.1	1800872	1803232	D	residues 1 to 786 of 786 are 97.97 pct identical to residues 1 to 790 of 790 from Escherichia coli K-12 : B1495; hypothetical protein	1800872..1803232	Shigella flexneri 2a str. 2457T	1078195
NP_837383.1	CDS	S1862	NC_004741.1	1803502	1804005	R	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri]; IS1 orfB	complement(1803502..1804005)	Shigella flexneri 2a str. 2457T	1078090
NP_837384.1	CDS	S1863	NC_004741.1	1803924	1804199	R	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(1803924..1804199)	Shigella flexneri 2a str. 2457T	1078197
NP_837385.1	CDS	S1865	NC_004741.1	1806810	1807085	D	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	1806810..1807085	Shigella flexneri 2a str. 2457T	1080531
NP_837386.1	CDS	S1866	NC_004741.1	1807004	1807507	D	residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri]; IS1 orfB	1807004..1807507	Shigella flexneri 2a str. 2457T	1078663
NP_837387.1	CDS	gadB	NC_004741.1	1807985	1809385	D	residues 1 to 466 of 466 are 100.00 pct identical to residues 1 to 466 of 466 from Escherichia coli K-12 : B1493; glutamate decarboxylase	1807985..1809385	Shigella flexneri 2a str. 2457T	1078199
NP_837388.1	CDS	xasA	NC_004741.1	1809541	1811076	D	residues 1 to 511 of 511 are 87.27 pct identical to residues 1 to 511 of 511 from Escherichia coli K-12 : B1492; acid sensitivity protein, transporter	1809541..1811076	Shigella flexneri 2a str. 2457T	1078202
NP_837389.1	CDS	S1869	NC_004741.1	1811207	1812526	D	residues 1 to 439 of 439 are 100.00 pct identical to residues 1 to 439 of 439 from Escherichia coli K-12 : B1491; hypothetical protein	1811207..1812526	Shigella flexneri 2a str. 2457T	1079979
NP_837390.1	CDS	S1873	NC_004741.1	1815194	1816090	D	residues 1 to 298 of 298 are 90.26 pct identical to residues 1 to 298 of 298 from Escherichia coli K-12 : B1485; ATP-dependent peptide transporter membrane subunit	1815194..1816090	Shigella flexneri 2a str. 2457T	1078205
NP_837391.1	CDS	S1874	NC_004741.1	1816087	1817073	D	residues 1 to 328 of 328 are 97.86 pct identical to residues 1 to 328 of 328 from Escherichia coli K-12 : B1484; ATP-binding component of a transport system	1816087..1817073	Shigella flexneri 2a str. 2457T	1080933
NP_837392.1	CDS	osmC	NC_004741.1	1818048	1818479	R	residues 1 to 143 of 143 are 100.00 pct identical to residues 1 to 143 of 143 from Escherichia coli K-12 : B1482; osmotically inducible protein	complement(1818048..1818479)	Shigella flexneri 2a str. 2457T	1078207
NP_837393.1	CDS	S1877	NC_004741.1	1818652	1819155	R	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri]; IS1 orfB	complement(1818652..1819155)	Shigella flexneri 2a str. 2457T	1078209
NP_837394.1	CDS	S1878	NC_004741.1	1819074	1819349	R	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(1819074..1819349)	Shigella flexneri 2a str. 2457T	1078114
NP_837395.1	CDS	sfcA	NC_004741.1	1819537	1821234	D	malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate; malate dehydrogenase	1819537..1821234	Shigella flexneri 2a str. 2457T	1078212
NP_837396.1	CDS	adhP	NC_004741.1	1821368	1822378	D	similar to zinc-dependent eukaryotic ADH enzymes and distinct from fermentative ADHs; alcohol dehydrogenase	1821368..1822378	Shigella flexneri 2a str. 2457T	1078211
NP_837397.1	CDS	yddM	NC_004741.1	1822446	1822808	D	residues 1 to 120 of 120 are 89.99 pct identical to residues 1 to 120 of 120 from Escherichia coli K-12 : B1477; hypothetical protein	1822446..1822808	Shigella flexneri 2a str. 2457T	1078217
NP_837398.1	CDS	fdnI	NC_004741.1	1823036	1823689	R	nitrate-inducible, cytochrome b556(fdn) component of formate dehydrogenase; formate dehydrogenase-N subunit gamma	complement(1823036..1823689)	Shigella flexneri 2a str. 2457T	1078218
NP_837399.1	CDS	fdnH	NC_004741.1	1823682	1824566	R	residues 1 to 283 of 294 are 100.00 pct identical to residues 1 to 283 of 294 from Escherichia coli K-12 : B1475; formate dehydrogenase-N, nitrate-inducible, iron-sulfur beta subunit	complement(1823682..1824566)	Shigella flexneri 2a str. 2457T	1078136
NP_837400.1	CDS	fdnG	NC_004741.1	1824579	1827626	R	residues 1 to 1015 of 1015 are 99.21 pct identical to residues 1 to 1015 of 1015 from Escherichia coli K-12 : B1474; selenocysteine; formate dehydrogenase-N, nitrate-inducible, alpha subunit	complement(1824579..1827626)	Shigella flexneri 2a str. 2457T	1078219
NP_837401.1	CDS	yddG	NC_004741.1	1827858	1828739	D	residues 1 to 293 of 293 are 90.78 pct identical to residues 1 to 293 of 293 from Escherichia coli K-12 : B1473; hypothetical protein	1827858..1828739	Shigella flexneri 2a str. 2457T	1078220
NP_837402.1	CDS	S1887	NC_004741.1	1828994	1830094	D	residues 1 to 93 of 364 are 100.00 pct identical to residues 1 to 93 of 96 from Escherichia coli K-12 : B1472; outer membrane porin protein	1828994..1830094	Shigella flexneri 2a str. 2457T	1078088
NP_837403.1	CDS	S1888	NC_004741.1	1830853	1831842	D	residues 1 to 317 of 329 are 92.42 pct identical to residues 1 to 317 of 318 from Escherichia coli K-12 : B1471; glycoprotein	1830853..1831842	Shigella flexneri 2a str. 2457T	1078222
NP_837404.1	CDS	S1890	NC_004741.1	1832130	1832405	D	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	1832130..1832405	Shigella flexneri 2a str. 2457T	1078223
NP_837405.1	CDS	S1891	NC_004741.1	1832324	1832827	D	residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri]; IS1 orfB	1832324..1832827	Shigella flexneri 2a str. 2457T	1080505
NP_837406.1	CDS	narU	NC_004741.1	1833285	1834673	D	residues 1 to 462 of 462 are 90.90 pct identical to residues 1 to 462 of 462 from Escherichia coli K-12 : B1469; nitrite extrusion protein 2	1833285..1834673	Shigella flexneri 2a str. 2457T	1078224
NP_837407.1	CDS	S1896	NC_004741.1	1839823	1841043	D	residues 1 to 406 of 406 are 98.02 pct identical to residues 1 to 406 of 406 from GenPept : >gb|AAK85176.1| (AF294823) transposase [Shigella sonnei]; partial; IS91 orf	1839823..1841043	Shigella flexneri 2a str. 2457T	1078226
NP_837408.1	CDS	S1897	NC_004741.1	1841282	1842004	R	residues 1 to 240 of 240 are 90.83 pct identical to residues 1 to 240 of 240 from Escherichia coli K-12 : B1450; DNA-binding transcriptional regulator	complement(1841282..1842004)	Shigella flexneri 2a str. 2457T	1078227
NP_837409.1	CDS	yncB	NC_004741.1	1842145	1843275	R	residues 1 to 376 of 376 are 98.93 pct identical to residues 1 to 376 of 376 from Escherichia coli K-12 : B1449; oxidoreductase	complement(1842145..1843275)	Shigella flexneri 2a str. 2457T	1077096
NP_837410.2	CDS	S1899	NC_004741.1	1843312	1844217	R	IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats; insertion element IS2 transposase InsD	complement(1843312..1844217)	Shigella flexneri 2a str. 2457T	1078228
NP_837411.2	CDS	S1900	NC_004741.1	1844175	1844540	R	IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats; insertion sequence 2 OrfA protein	complement(1844175..1844540)	Shigella flexneri 2a str. 2457T	1078230
NP_837412.1	CDS	S1901	NC_004741.1	1844699	1845217	D	residues 1 to 172 of 172 are 91.27 pct identical to residues 1 to 172 of 172 from Escherichia coli K-12 : B1448; resistance protein	1844699..1845217	Shigella flexneri 2a str. 2457T	1078232
NP_837413.1	CDS	S1902	NC_004741.1	1845214	1845663	D	residues 1 to 149 of 149 are 98.65 pct identical to residues 1 to 149 of 149 from Escherichia coli K-12 : B1447; hypothetical protein	1845214..1845663	Shigella flexneri 2a str. 2457T	1080576
NP_837414.1	CDS	S1903	NC_004741.1	1845664	1845897	R	residues 1 to 77 of 77 are 100.00 pct identical to residues 1 to 77 of 77 from Escherichia coli K-12 : B1446; hypothetical protein	complement(1845664..1845897)	Shigella flexneri 2a str. 2457T	1078233
NP_837415.1	CDS	S1904	NC_004741.1	1845983	1846231	R	residues 1 to 82 of 82 are 96.34 pct identical to residues 1 to 82 of 82 from Escherichia coli K-12 : B1445; hypothetical protein	complement(1845983..1846231)	Shigella flexneri 2a str. 2457T	1078235
NP_837416.1	CDS	S1905	NC_004741.1	1847867	1849291	R	catalyzes the formation of 4-aminobutanoate from 4-aminobutanal; involved in putrescine degradation; gamma-aminobutyraldehyde dehydrogenase	complement(1847867..1849291)	Shigella flexneri 2a str. 2457T	1078236
NP_837417.1	CDS	S1906	NC_004741.1	1849313	1850107	R	residues 1 to 264 of 264 are 74.24 pct identical to residues 1 to 264 of 264 from Escherichia coli K-12 : B1443; transport system permease	complement(1849313..1850107)	Shigella flexneri 2a str. 2457T	1078239
NP_837418.1	CDS	S1908	NC_004741.1	1850946	1851560	D	residues 1 to 199 of 204 are 98.49 pct identical to residues 1 to 199 of 406 from GenPept : >gb|AAK85176.1| (AF294823) transposase [Shigella sonnei]; partial; IS1294 transposase	1850946..1851560	Shigella flexneri 2a str. 2457T	1078242
NP_837419.1	CDS	S1909	NC_004741.1	1851560	1852006	D	residues 1 to 148 of 148 are 83.33 pct identical to residues 19 to 168 of 168 from GenPept : >dbj|BAA84868.1| (AB024946) orf33 [Escherichia coli]; IS1294 transposase	1851560..1852006	Shigella flexneri 2a str. 2457T	1078676
NP_837420.1	CDS	S1910	NC_004741.1	1852484	1852690	R	residues 1 to 68 of 68 are 100.00 pct identical to residues 30 to 97 of 97 from GenPept : >gb|AAL72510.1| (AF386526) transposase tnpC-like protein [Shigella flexneri 2a]; partial; IS629 orfB	complement(1852484..1852690)	Shigella flexneri 2a str. 2457T	1078038
NP_837421.1	CDS	S1911	NC_004741.1	1852746	1853105	R	residues 1 to 119 of 119 are 100.00 pct identical to residues 17 to 135 of 135 from GenPept : >gb|AAL72509.1| (AF386526) transposase-like protein [Shigella flexneri 2a]; partial; IS629 orfB	complement(1852746..1853105)	Shigella flexneri 2a str. 2457T	1078245
NP_837422.1	CDS	S1912	NC_004741.1	1853368	1853694	R	residues 1 to 108 of 108 are 70.37 pct identical to residues 1 to 108 of 108 from GenPept : >gb|AAL72412.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS629 orfA	complement(1853368..1853694)	Shigella flexneri 2a str. 2457T	1078246
NP_837423.1	CDS	S1915	NC_004741.1	1856431	1856772	R	residues 1 to 113 of 113 are 86.72 pct identical to residues 1 to 113 of 113 from Escherichia coli K-12 : B1839; hypothetical protein	complement(1856431..1856772)	Shigella flexneri 2a str. 2457T	1078247
NP_837424.1	CDS	S1917	NC_004741.1	1857661	1858035	R	residues 1 to 124 of 124 are 89.51 pct identical to residues 1 to 124 of 124 from Escherichia coli K-12 : B1841; hypothetical protein	complement(1857661..1858035)	Shigella flexneri 2a str. 2457T	1079924
NP_837425.1	CDS	holE	NC_004741.1	1858174	1858404	D	residues 1 to 76 of 76 are 100.00 pct identical to residues 1 to 76 of 76 from Escherichia coli K-12 : B1842; DNA polymerase III subunit theta	1858174..1858404	Shigella flexneri 2a str. 2457T	1078156
NP_837426.1	CDS	S1919	NC_004741.1	1858737	1859162	D	residues 1 to 141 of 141 are 99.29 pct identical to residues 78 to 218 of 218 from Escherichia coli K-12 : B1843; hypothetical protein	1858737..1859162	Shigella flexneri 2a str. 2457T	1078252
NP_837427.1	CDS	S1920	NC_004741.1	1859186	1859848	D	3'-5' exonuclease activity on single or double-strand DNA; exodeoxyribonuclease X	1859186..1859848	Shigella flexneri 2a str. 2457T	1078253
NP_837428.1	CDS	ptrB	NC_004741.1	1859845	1861905	R	PtrB; oligopeptidase that cleaves peptide bonds following arginine and lysine residues; protease 2	complement(1859845..1861905)	Shigella flexneri 2a str. 2457T	1078255
NP_837429.1	CDS	yebE	NC_004741.1	1862115	1862774	R	residues 1 to 219 of 219 are 72.60 pct identical to residues 1 to 219 of 219 from Escherichia coli K-12 : B1846; hypothetical protein	complement(1862115..1862774)	Shigella flexneri 2a str. 2457T	1076941
NP_837430.1	CDS	yebF	NC_004741.1	1863101	1863457	R	secreted protein; unknown function; hypothetical protein	complement(1863101..1863457)	Shigella flexneri 2a str. 2457T	1078256
NP_837431.1	CDS	purT	NC_004741.1	1863948	1865126	D	non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis; phosphoribosylglycinamide formyltransferase 2	1863948..1865126	Shigella flexneri 2a str. 2457T	1078096
NP_837432.1	CDS	eda	NC_004741.1	1865182	1865823	R	catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate; keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase	complement(1865182..1865823)	Shigella flexneri 2a str. 2457T	1078259
NP_837433.1	CDS	edd	NC_004741.1	1865860	1867671	R	catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate; phosphogluconate dehydratase	complement(1865860..1867671)	Shigella flexneri 2a str. 2457T	1078258
NP_837434.1	CDS	zwf	NC_004741.1	1867906	1869381	R	catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase	complement(1867906..1869381)	Shigella flexneri 2a str. 2457T	1078260
NP_837435.1	CDS	yebK	NC_004741.1	1869719	1870540	D	Represses the expression of the zwf, eda, glp and gap; DNA-binding transcriptional regulator HexR	1869719..1870540	Shigella flexneri 2a str. 2457T	1080143
NP_837436.1	CDS	pykA	NC_004741.1	1870718	1872160	D	catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase	1870718..1872160	Shigella flexneri 2a str. 2457T	1078261
NP_837437.1	CDS	msbB	NC_004741.1	1872291	1873262	R	Transfers myristate or laurate, activated on ACP, to the lipid IVA moiety of (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase	complement(1872291..1873262)	Shigella flexneri 2a str. 2457T	1078262
NP_837438.1	CDS	yebA	NC_004741.1	1873382	1874704	R	residues 22 to 440 of 440 are 100.00 pct identical to residues 1 to 419 of 419 from Escherichia coli K-12 : B1856; hypothetical protein	complement(1873382..1874704)	Shigella flexneri 2a str. 2457T	1079644
NP_837439.2	CDS	znuA	NC_004741.1	1874720	1875652	R	involved in transport of zinc(II) with ZnuA and C; high-affinity zinc transporter periplasmic component	complement(1874720..1875652)	Shigella flexneri 2a str. 2457T	1078264
NP_837440.1	CDS	znuC	NC_004741.1	1875731	1876486	D	involved in transport of zinc(II) with ZnuA and C; high-affinity zinc transporter ATPase	1875731..1876486	Shigella flexneri 2a str. 2457T	1078265
NP_837441.1	CDS	znuB	NC_004741.1	1876483	1877268	D	involved in transport of zinc(II) with ZnuA and C; high-affinity zinc transporter membrane component	1876483..1877268	Shigella flexneri 2a str. 2457T	1078266
NP_837442.1	CDS	ruvB	NC_004741.1	1877415	1878425	R	promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB	complement(1877415..1878425)	Shigella flexneri 2a str. 2457T	1078268
NP_837443.1	CDS	ruvA	NC_004741.1	1878434	1879045	R	plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA	complement(1878434..1879045)	Shigella flexneri 2a str. 2457T	1077912
NP_837444.1	CDS	ruvC	NC_004741.1	1879923	1880444	R	endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase	complement(1879923..1880444)	Shigella flexneri 2a str. 2457T	1078270
NP_837445.1	CDS	yebC	NC_004741.1	1880479	1881219	R	residues 1 to 246 of 246 are 100.00 pct identical to residues 1 to 246 of 246 from Escherichia coli K-12 : B1864; hypothetical protein	complement(1880479..1881219)	Shigella flexneri 2a str. 2457T	1078271
NP_837446.1	CDS	ntpA	NC_004741.1	1881248	1881730	R	converts dATP to dAMP and pyrophosphate; dATP pyrophosphohydrolase	complement(1881248..1881730)	Shigella flexneri 2a str. 2457T	1078272
NP_837447.1	CDS	aspS	NC_004741.1	1881818	1883590	R	catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase	complement(1881818..1883590)	Shigella flexneri 2a str. 2457T	1078274
NP_837448.1	CDS	S1944	NC_004741.1	1884346	1885542	D	residues 1 to 398 of 398 are 91.45 pct identical to residues 1 to 398 of 398 from GenPept : >gb|AAL72391.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; ISSfl4 orf	1884346..1885542	Shigella flexneri 2a str. 2457T	1078276
NP_837449.1	CDS	S1946	NC_004741.1	1886271	1886519	D	residues 1 to 82 of 82 are 96.34 pct identical to residues 1 to 82 of 82 from GenPept : >gb|AAG57731.1|AE005491_11 (AE005491) Z3916 gene product [Escherichia coli O157:H7 EDL933]; hypothetical protein	1886271..1886519	Shigella flexneri 2a str. 2457T	1078278
NP_837450.1	CDS	ipaH_4	NC_004741.1	1887119	1888870	D	residues 1 to 583 of 583 are 99.82 pct identical to residues 1 to 583 of 583 from NRprotein_Feb03 : >ref|NP_707728.1| IpaH9.8 [Shigella flexneri 2a str. 301] gb|AAN43435.1|AE015207_3 IpaH9.8 [Shigella flexneri 2a str. 301]; invasion plasmid antigen	1887119..1888870	Shigella flexneri 2a str. 2457T	1078279
NP_837451.1	CDS	S1948	NC_004741.1	1888871	1889050	R	no significant similarities; hypothetical protein	complement(1888871..1889050)	Shigella flexneri 2a str. 2457T	1080555
NP_837452.1	CDS	S1949	NC_004741.1	1889050	1889673	R	residues 21 to 207 of 207 are 68.44 pct identical to residues 2 to 188 of 188 from GenPept : >emb|CAC83575.1| (AJ298298) hypothetical protein [Bacteriophage P27]; hypothetical protein	complement(1889050..1889673)	Shigella flexneri 2a str. 2457T	1078280
NP_837453.1	CDS	S1950	NC_004741.1	1891397	1891939	D	residues 1 to 180 of 180 are 70.55 pct identical to residues 1 to 179 of 179 from GenPept : >emb|CAA80648.1| (Z23101) Sequence similarity to P4 ORF199 suggests ORF179 expression [Shigella flexneri]; hypothetical protein	1891397..1891939	Shigella flexneri 2a str. 2457T	1078281
NP_837454.1	CDS	S1952	NC_004741.1	1892281	1892691	D	IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats; insertion sequence 2 OrfA protein	1892281..1892691	Shigella flexneri 2a str. 2457T	1078282
NP_837455.2	CDS	S1953	NC_004741.1	1892649	1893554	D	IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats; insertion element IS2 transposase InsD	1892649..1893554	Shigella flexneri 2a str. 2457T	1078283
NP_837456.1	CDS	S1954	NC_004741.1	1894097	1894372	D	Rac prophage hypothetical protein; hypothetical protein	1894097..1894372	Shigella flexneri 2a str. 2457T	1079737
NP_837457.1	CDS	S1955	NC_004741.1	1894472	1895896	D	residues 1 to 474 of 474 are 96.20 pct identical to residues 1 to 474 of 1042 from GenPept : >emb|CAD05617.1| (AL627272) exodeoxyribonuclease VIII [Salmonella enterica subsp. enterica serovar Typhi]; exodeoxyribonuclease VIII	1894472..1895896	Shigella flexneri 2a str. 2457T	1078284
NP_837458.1	CDS	S1957	NC_004741.1	1897139	1897459	D	residues 10 to 105 of 106 are 83.33 pct identical to residues 2 to 97 of 98 from GenPept : >dbj|BAB87956.1| (AP004402) Gam protein [Stx2 converting bacteriophage I]; host-nuclease inhibitor protein Gam	1897139..1897459	Shigella flexneri 2a str. 2457T	1078287
NP_837459.1	CDS	S1958	NC_004741.1	1897519	1898562	D	residues 1 to 181 of 347 are 28.27 pct identical to residues 15 to 188 of 340 from GenPept : >gb|AAK94416.1|AF396866_81 (AF396866) p81 [Bacteriophage Mx8]; bacteriophage protein	1897519..1898562	Shigella flexneri 2a str. 2457T	1078288
NP_837460.1	CDS	S1959	NC_004741.1	1898637	1898963	D	residues 1 to 108 of 108 are 74.07 pct identical to residues 1 to 108 of 108 from GenPept : >gb|AAF09023.1| (AF139596) unknown [Shigella flexneri]; IS629 orfA	1898637..1898963	Shigella flexneri 2a str. 2457T	1078290
NP_837461.1	CDS	S1960	NC_004741.1	1899199	1899846	D	residues 1 to 215 of 215 are 99.06 pct identical to residues 8 to 222 of 222 from GenPept : >gb|AAL72361.1| (AF386526) transposase [Shigella flexneri 2a]; partial; IS629 orfB	1899199..1899846	Shigella flexneri 2a str. 2457T	1078291
NP_837462.1	CDS	S1961	NC_004741.1	1900250	1900753	R	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri]; IS1 orfB	complement(1900250..1900753)	Shigella flexneri 2a str. 2457T	1078292
NP_837463.1	CDS	S1962	NC_004741.1	1900672	1900947	R	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(1900672..1900947)	Shigella flexneri 2a str. 2457T	1078293
NP_837464.1	CDS	S1963	NC_004741.1	1901037	1901642	D	residues 1 to 201 of 201 are 97.51 pct identical to residues 211 to 411 of 411 from GenPept : >gb|AAG56452.1|AE005371_8 (AE005371)  integrase for prophage CP-933R [Escherichia coli O157:H7 EDL933]; integrase for prophage CP-933R	1901037..1901642	Shigella flexneri 2a str. 2457T	1078294
NP_837465.1	CDS	sitA	NC_004741.1	1902098	1902988	D	residues 16 to 296 of 296 are 79.35 pct identical to residues 24 to 304 of 305 from GenPept : >gb|AAL21741.1| (AE008830) Salmonella iron transporter: fur regulated [Salmonella typhimurium LT2]; Iron transport protein	1902098..1902988	Shigella flexneri 2a str. 2457T	1078295
NP_837466.1	CDS	sitB	NC_004741.1	1902988	1903815	D	residues 2 to 266 of 275 are 77.73 pct identical to residues 1 to 265 of 273 from GenPept : >emb|CAD05969.1| (AL627276) Iron transport protein, ATP-binding component [Salmonella enterica subsp. enterica serovar Typhi]; Iron transport protein, ATP-binding component	1902988..1903815	Shigella flexneri 2a str. 2457T	1078296
NP_837467.1	CDS	sitC	NC_004741.1	1903812	1904669	D	residues 1 to 277 of 285 are 75.45 pct identical to residues 1 to 277 of 286 from GenPept : >gb|AAL21743.1| (AE008830) Salmonella iron transporter: fur regulated [Salmonella typhimurium LT2]; Iron transport protein	1903812..1904669	Shigella flexneri 2a str. 2457T	1078297
NP_837468.1	CDS	sitD	NC_004741.1	1904666	1905523	D	residues 2 to 263 of 285 are 64.50 pct identical to residues 3 to 264 of 282 from GenPept : >emb|CAD05971.1| (AL627276) Iron transport protein, inner membrane component [Salmonella enterica subsp. enterica serovar Typhi]; Iron transport protein, inner membrane component	1904666..1905523	Shigella flexneri 2a str. 2457T	1078298
NP_837469.1	CDS	S1968	NC_004741.1	1905724	1906287	R	residues 1 to 187 of 187 are 70.05 pct identical to residues 2 to 188 of 188 from GenPept : >emb|CAC83575.1| (AJ298298) hypothetical protein [Bacteriophage P27]; hypothetical protein	complement(1905724..1906287)	Shigella flexneri 2a str. 2457T	1078299
NP_837470.1	CDS	S1969	NC_004741.1	1906298	1907566	R	residues 1 to 420 of 422 are 37.55 pct identical to residues 1 to 488 of 490 from GenPept : >emb|CAC83574.1| (AJ298298)  tail fiber protein [Bacteriophage P27]; tail fiber protein	complement(1906298..1907566)	Shigella flexneri 2a str. 2457T	1078300
NP_837471.1	CDS	S1970	NC_004741.1	1907590	1908078	R	residues 9 to 162 of 162 are 75.97 pct identical to residues 29 to 182 of 182 from GenPept : >emb|CAC83573.1| (AJ298298)  tail fiber assembly protein [Bacteriophage P27]; tail fiber assembly protein	complement(1907590..1908078)	Shigella flexneri 2a str. 2457T	1078301
NP_837472.1	CDS	S1971	NC_004741.1	1908138	1908341	R	residues 5 to 67 of 67 are 58.73 pct identical to residues 497 to 558 of 558 from GenPept : >dbj|BAA00552.1| (D00660) Bcv gene product [Shigella boydii]; hypothetical protein	complement(1908138..1908341)	Shigella flexneri 2a str. 2457T	1078302
NP_837473.1	CDS	S1972	NC_004741.1	1908558	1909271	R	residues 1 to 237 of 237 are 90.71 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAL72453.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS600 orfB	complement(1908558..1909271)	Shigella flexneri 2a str. 2457T	1078303
NP_837474.1	CDS	S1973	NC_004741.1	1909479	1909688	R	residues 1 to 69 of 69 are 100.00 pct identical to residues 99 to 167 of 167 from GenPept : >gb|AAL72450.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; partial; IS1 orfB	complement(1909479..1909688)	Shigella flexneri 2a str. 2457T	1080732
NP_837475.1	CDS	S1975	NC_004741.1	1909901	1910176	R	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(1909901..1910176)	Shigella flexneri 2a str. 2457T	1078304
NP_837476.1	CDS	S1978	NC_004741.1	1910765	1911391	R	residues 1 to 208 of 208 are 100.00 pct identical to residues 72 to 279 of 279 from GenPept : >gb|AAL72449.1| (AF386526) InsB [Shigella flexneri 2a]; partial; IS911 orfB	complement(1910765..1911391)	Shigella flexneri 2a str. 2457T	1078305
NP_837477.1	CDS	S1980	NC_004741.1	1911631	1911933	R	residues 1 to 100 of 100 are 100.00 pct identical to residues 13 to 112 of 112 from GenPept : >gb|AAL72382.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS911 orfA	complement(1911631..1911933)	Shigella flexneri 2a str. 2457T	1078307
NP_837478.1	CDS	S1981	NC_004741.1	1912634	1914238	R	residues 15 to 534 of 534 are 74.24 pct identical to residues 7 to 531 of 548 from GenPept : >emb|CAD02867.1| (AL627277) possible integrase [Salmonella enterica subsp. enterica serovar Typhi]; integrase	complement(1912634..1914238)	Shigella flexneri 2a str. 2457T	1078308
NP_837479.1	CDS	S1986	NC_004741.1	1914839	1915528	R	residues 1 to 229 of 229 are 91.70 pct identical to residues 1 to 229 of 229 from GenPept : >gb|AAK16973.1|AE006460_11 (AE006460)  Q antiterminator encoded by prophage CP-933P [Escherichia coli O157:H7 EDL933]; Q antiterminator encoded by prophage CP-933P	complement(1914839..1915528)	Shigella flexneri 2a str. 2457T	1078313
NP_837480.1	CDS	S1987	NC_004741.1	1915525	1915884	R	residues 1 to 119 of 119 are 92.43 pct identical to residues 1 to 119 of 119 from GenPept : >gb|AAK16974.1|AE006460_12 (AE006460)  endonuclease encoded by cryptic prophage CP-933P [Escherichia coli O157:H7 EDL933]; crossover junction endodeoxyribonuclease	complement(1915525..1915884)	Shigella flexneri 2a str. 2457T	1078314
NP_837481.1	CDS	S1989	NC_004741.1	1916531	1917244	D	residues 1 to 237 of 237 are 91.13 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAK18576.1|AF348706_265 (AF348706) IS600 orfB [Shigella flexneri]; IS600 orfB	1916531..1917244	Shigella flexneri 2a str. 2457T	1078315
NP_837482.1	CDS	S1990	NC_004741.1	1917742	1918569	D	residues 1 to 275 of 275 are 89.81 pct identical to residues 1 to 275 of 275 from GenPept : >emb|CAC83523.1| (AJ298298)  serine protease [Bacteriophage P27]; serine protease	1917742..1918569	Shigella flexneri 2a str. 2457T	1078187
NP_837483.1	CDS	S1991	NC_004741.1	1918613	1919362	D	residues 114 to 246 of 249 are 69.92 pct identical to residues 102 to 234 of 235 from GenPept : >emb|CAC83532.1| (AJ298298) hypothetical protein [Bacteriophage P27]; hypothetical protein	1918613..1919362	Shigella flexneri 2a str. 2457T	1078316
NP_837484.1	CDS	S1992	NC_004741.1	1919359	1919928	D	no significant similarities; hypothetical protein	1919359..1919928	Shigella flexneri 2a str. 2457T	1078317
NP_837485.1	CDS	S1994	NC_004741.1	1920052	1920294	D	residues 1 to 80 of 80 are 85.00 pct identical to residues 1 to 80 of 80 from GenPept : >dbj|BAB36434.1| (AP002560) hypothetical protein [Escherichia coli O157:H7]; hypothetical protein	1920052..1920294	Shigella flexneri 2a str. 2457T	1078318
NP_837486.1	CDS	S1995	NC_004741.1	1920298	1920444	D	residues 1 to 44 of 48 are 77.27 pct identical to residues 1 to 44 of 44 from GenPept : >gb|AAG57257.1|AE005444_7 (AE005444) unknown protein encoded within prophage CP-933V [Escherichia coli O157:H7 EDL933]; bacteriophage protein	1920298..1920444	Shigella flexneri 2a str. 2457T	1078254
NP_837487.1	CDS	S1998	NC_004741.1	1921491	1921793	R	residues 1 to 100 of 100 are 100.00 pct identical to residues 13 to 112 of 112 from GenPept : >gb|AAL72382.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS911 orfA	complement(1921491..1921793)	Shigella flexneri 2a str. 2457T	1078319
NP_837488.1	CDS	yecN	NC_004741.1	1922426	1922821	D	residues 15 to 131 of 131 are 99.14 pct identical to residues 25 to 141 of 141 from Escherichia coli K-12 : B1869; hypothetical protein	1922426..1922821	Shigella flexneri 2a str. 2457T	1079302
NP_837489.1	CDS	yecO	NC_004741.1	1922862	1923605	D	residues 1 to 247 of 247 are 99.59 pct identical to residues 1 to 247 of 247 from Escherichia coli K-12 : B1870; hypothetical protein	1922862..1923605	Shigella flexneri 2a str. 2457T	1078321
NP_837490.1	CDS	yecP	NC_004741.1	1923602	1924573	D	residues 1 to 323 of 323 are 98.14 pct identical to residues 1 to 323 of 323 from Escherichia coli K-12 : B1871; enzyme	1923602..1924573	Shigella flexneri 2a str. 2457T	1078322
NP_837491.1	CDS	bisZ	NC_004741.1	1924738	1927167	R	residues 1 to 809 of 809 are 96.04 pct identical to residues 7 to 815 of 815 from Escherichia coli K-12 : B1872; biotin sulfoxide reductase	complement(1924738..1927167)	Shigella flexneri 2a str. 2457T	1078324
NP_837492.1	CDS	yecK	NC_004741.1	1927192	1928292	R	residues 1 to 366 of 366 are 92.07 pct identical to residues 1 to 366 of 366 from Escherichia coli K-12 : B1873; cytochrome C-type protein	complement(1927192..1928292)	Shigella flexneri 2a str. 2457T	1078325
NP_837493.1	CDS	cutC	NC_004741.1	1928680	1929120	R	residues 1 to 146 of 146 are 100.00 pct identical to residues 1 to 146 of 146 from Escherichia coli K-12 : B1874; copper homeostasis protein	complement(1928680..1929120)	Shigella flexneri 2a str. 2457T	1078326
NP_837494.1	CDS	yecM	NC_004741.1	1929440	1930006	R	residues 1 to 188 of 188 are 97.34 pct identical to residues 3 to 190 of 190 from Escherichia coli K-12 : B1875; hypothetical protein	complement(1929440..1930006)	Shigella flexneri 2a str. 2457T	1078327
NP_837495.1	CDS	argS	NC_004741.1	1930222	1931955	D	catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase	1930222..1931955	Shigella flexneri 2a str. 2457T	1078328
NP_837496.1	CDS	S2009	NC_004741.1	1932840	1933274	R	residues 16 to 144 of 144 are 99.22 pct identical to residues 94 to 222 of 222 from GenPept : >gb|AAL72362.1| (AF386526) transposase [Shigella flexneri 2a]; partial; IS629 orfB	complement(1932840..1933274)	Shigella flexneri 2a str. 2457T	1078330
NP_837497.1	CDS	S2011	NC_004741.1	1933709	1934035	R	residues 1 to 108 of 108 are 80.55 pct identical to residues 1 to 108 of 108 from GenPept : >gb|AAL72409.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS629 orfA	complement(1933709..1934035)	Shigella flexneri 2a str. 2457T	1078331
NP_837498.1	CDS	flhE	NC_004741.1	1934087	1934425	R	residues 1 to 112 of 112 are 98.21 pct identical to residues 1 to 112 of 130 from Escherichia coli K-12 : B1878; flagellar protein	complement(1934087..1934425)	Shigella flexneri 2a str. 2457T	1078332
NP_837499.1	CDS	flhB	NC_004741.1	1936449	1937642	R	membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB	complement(1936449..1937642)	Shigella flexneri 2a str. 2457T	1078334
NP_837500.1	CDS	S2015	NC_004741.1	1937878	1938336	D	residues 1 to 128 of 152 are 40.90 pct identical to residues 1 to 122 of 465 from GenPept : >emb|CAD00870.1| (AL591984) similar to dGTP triphosphohydrolase [Listeria monocytogenes]; hypothetical protein	1937878..1938336	Shigella flexneri 2a str. 2457T	1078335
NP_837501.1	CDS	S2018	NC_004741.1	1939126	1939428	R	residues 1 to 100 of 100 are 100.00 pct identical to residues 13 to 112 of 112 from GenPept : >gb|AAL72382.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS911 orfA	complement(1939126..1939428)	Shigella flexneri 2a str. 2457T	1078336
NP_837502.1	CDS	S2019	NC_004741.1	1939569	1939964	D	hypothetical protein	1939569..1939964	Shigella flexneri 2a str. 2457T	1078337
NP_837503.1	CDS	S2020	NC_004741.1	1940459	1941172	D	residues 1 to 237 of 237 are 91.13 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAK18576.1|AF348706_265 (AF348706) IS600 orfB [Shigella flexneri]; IS600 orfB	1940459..1941172	Shigella flexneri 2a str. 2457T	1078339
NP_837504.1	CDS	cheZ	NC_004741.1	1941677	1942321	R	cytosolic phosphatase which functions in the chemotaxis signal transduction complex by controlling the level of phosphorylated CheY through dephosphorylation; chemotaxis regulator CheZ	complement(1941677..1942321)	Shigella flexneri 2a str. 2457T	1078341
NP_837505.1	CDS	cheY	NC_004741.1	1942332	1942721	R	chemotaxis regulator that, when phosphorylated, interacts with the flagellar motor causing the flagella to spin clockwise which causes the cell to tumble; chemotaxis regulatory protein CheY	complement(1942332..1942721)	Shigella flexneri 2a str. 2457T	1078342
NP_837506.1	CDS	cheB	NC_004741.1	1942736	1943785	R	regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase	complement(1942736..1943785)	Shigella flexneri 2a str. 2457T	1078343
NP_837507.1	CDS	cheR	NC_004741.1	1943788	1944648	R	methylates the MCP; chemotaxis methyltransferase CheR	complement(1943788..1944648)	Shigella flexneri 2a str. 2457T	1078344
NP_837508.1	CDS	tap	NC_004741.1	1944667	1946268	R	mediates taxis toward dipeptides; methyl-accepting protein IV	complement(1944667..1946268)	Shigella flexneri 2a str. 2457T	1078345
NP_837509.1	CDS	tar	NC_004741.1	1946314	1947975	R	residues 1 to 553 of 553 are 83.18 pct identical to residues 1 to 553 of 553 from Escherichia coli K-12 : B1886; methyl-accepting chemotaxis protein II, aspartate sensor receptor	complement(1946314..1947975)	Shigella flexneri 2a str. 2457T	1078346
NP_837510.1	CDS	cheW	NC_004741.1	1948120	1948623	R	residues 1 to 167 of 167 are 91.01 pct identical to residues 1 to 167 of 167 from Escherichia coli K-12 : B1887; purine-binding chemotaxis protein	complement(1948120..1948623)	Shigella flexneri 2a str. 2457T	1078347
NP_837511.1	CDS	cheA	NC_004741.1	1948644	1950608	R	chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY; sensory histidine kinase/signal sensing protein; CheA is the histidine kinase component; chemotaxis protein CheA	complement(1948644..1950608)	Shigella flexneri 2a str. 2457T	1078348
NP_837512.1	CDS	motB	NC_004741.1	1950613	1951539	R	with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotB	complement(1950613..1951539)	Shigella flexneri 2a str. 2457T	1078576
NP_837513.1	CDS	motA	NC_004741.1	1951536	1952423	R	With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotA	complement(1951536..1952423)	Shigella flexneri 2a str. 2457T	1078349
NP_837514.1	CDS	flhC	NC_004741.1	1952550	1953128	R	With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems; transcriptional activator FlhC	complement(1952550..1953128)	Shigella flexneri 2a str. 2457T	1078350
NP_837515.1	CDS	S2033	NC_004741.1	1953391	1953666	D	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	1953391..1953666	Shigella flexneri 2a str. 2457T	1078352
NP_837516.1	CDS	S2034	NC_004741.1	1953585	1954088	D	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri]; IS1 orfB	1953585..1954088	Shigella flexneri 2a str. 2457T	1078353
NP_837517.1	CDS	otsB	NC_004741.1	1954526	1955326	R	biosynthetic; catalyzes the formation of trehalose and phosphate from trehalose-6-phosphate; expression is increased under osmotic stress and induced during the transition to stationary phase and by decreased temperature; trehalose-6-phosphate phosphatase	complement(1954526..1955326)	Shigella flexneri 2a str. 2457T	1078355
NP_837518.1	CDS	araH	NC_004741.1	1955493	1956482	R	Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; L-arabinose transporter permease	complement(1955493..1956482)	Shigella flexneri 2a str. 2457T	1078356
NP_837519.1	CDS	araG	NC_004741.1	1956494	1958008	R	Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; L-arabinose transporter ATP-binding protein	complement(1956494..1958008)	Shigella flexneri 2a str. 2457T	1078357
NP_837520.1	CDS	yecI	NC_004741.1	1959864	1960367	D	residues 1 to 167 of 167 are 100.00 pct identical to residues 1 to 167 of 167 from Escherichia coli K-12 : B1902; ferritin-like protein	1959864..1960367	Shigella flexneri 2a str. 2457T	1078359
NP_837522.1	CDS	S2043	NC_004741.1	1961162	1961485	D	residues 1 to 107 of 107 are 88.78 pct identical to residues 1 to 107 of 107 from Escherichia coli K-12 : B1904; hypothetical protein	1961162..1961485	Shigella flexneri 2a str. 2457T	1078361
NP_837523.1	CDS	ftn	NC_004741.1	1961656	1962153	D	cytoplasmic iron storage protein; ferritin	1961656..1962153	Shigella flexneri 2a str. 2457T	1078362
NP_837524.1	CDS	yecH	NC_004741.1	1962190	1962429	R	residues 1 to 79 of 79 are 96.20 pct identical to residues 1 to 79 of 79 from Escherichia coli K-12 : B1906; hypothetical protein	complement(1962190..1962429)	Shigella flexneri 2a str. 2457T	1078363
NP_837525.1	CDS	tyrP	NC_004741.1	1962619	1963830	D	residues 1 to 403 of 403 are 83.62 pct identical to residues 1 to 403 of 403 from Escherichia coli K-12 : B1907; tyrosine-specific transport protein	1962619..1963830	Shigella flexneri 2a str. 2457T	1078364
NP_837526.1	CDS	yecA	NC_004741.1	1963892	1964557	R	residues 1 to 221 of 221 are 100.00 pct identical to residues 1 to 221 of 221 from Escherichia coli K-12 : B1908; hypothetical protein	complement(1963892..1964557)	Shigella flexneri 2a str. 2457T	1078365
NP_837527.1	CDS	pgsA	NC_004741.1	1965207	1965755	R	residues 1 to 182 of 182 are 99.45 pct identical to residues 1 to 182 of 182 from Escherichia coli K-12 : B1912; phosphatidylglycerophosphate synthetase	complement(1965207..1965755)	Shigella flexneri 2a str. 2457T	1078369
NP_837528.2	CDS	uvrC	NC_004741.1	1965812	1967644	R	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C	complement(1965812..1967644)	Shigella flexneri 2a str. 2457T	1078370
NP_837529.1	CDS	uvrY	NC_004741.1	1967641	1968297	R	in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system; in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system; response regulator	complement(1967641..1968297)	Shigella flexneri 2a str. 2457T	1078371
NP_837530.1	CDS	yecF	NC_004741.1	1968756	1968980	D	residues 1 to 74 of 74 are 100.00 pct identical to residues 1 to 74 of 74 from Escherichia coli K-12 : B1915; hypothetical protein	1968756..1968980	Shigella flexneri 2a str. 2457T	1078372
NP_837531.1	CDS	sdiA	NC_004741.1	1969007	1969633	R	residues 1 to 207 of 208 are 96.13 pct identical to residues 1 to 207 of 240 from Escherichia coli K-12 : B1916; transcriptional regulator of ftsQAZ gene cluster	complement(1969007..1969633)	Shigella flexneri 2a str. 2457T	1078373
NP_837532.1	CDS	yecC	NC_004741.1	1969863	1970615	R	residues 1 to 250 of 250 are 89.60 pct identical to residues 1 to 250 of 250 from Escherichia coli K-12 : B1917; amino-acid ABC transporter ATP-binding protein YecC	complement(1969863..1970615)	Shigella flexneri 2a str. 2457T	1078405
NP_837533.1	CDS	yecS	NC_004741.1	1970612	1971280	R	residues 1 to 222 of 222 are 85.58 pct identical to residues 1 to 222 of 222 from Escherichia coli K-12 : B1918; transport system permease (former yecC)	complement(1970612..1971280)	Shigella flexneri 2a str. 2457T	1078374
NP_837534.2	CDS	yedO	NC_004741.1	1971295	1972281	R	catalyzes the formation of pyruvate from D-cysteine; D-cysteine desulfhydrase	complement(1971295..1972281)	Shigella flexneri 2a str. 2457T	1078375
NP_837535.1	CDS	fliZ	NC_004741.1	1973275	1973862	R	expression activator of the class 2 type of flagellar operons, essential to achieve maximal cell motility; activator of type 1 fimbrial gene expression; cell density-responsive regulator; FliZ in Salmonella typhimurium induces HilA, an activator of invasion genes necessary to achieve full virulence; flagella biosynthesis protein FliZ	complement(1973275..1973862)	Shigella flexneri 2a str. 2457T	1078376
NP_837536.1	CDS	fliC	NC_004741.1	1974756	1976408	R	structural flagella protein; individual Salmonella serotypes usually alternate between the production of 2 antigenic forms of flagella, termed phase 1 and phase 2, each specified by separate structural genes; flagellin	complement(1974756..1976408)	Shigella flexneri 2a str. 2457T	1078378
NP_837537.1	CDS	fliD	NC_004741.1	1976674	1978080	D	involved in flagellin assembly; flagellar capping protein	1976674..1978080	Shigella flexneri 2a str. 2457T	1078379
NP_837538.1	CDS	fliS	NC_004741.1	1978105	1978515	D	flagellin specific chaperone; flagellar protein FliS	1978105..1978515	Shigella flexneri 2a str. 2457T	1078392
NP_837539.1	CDS	fliT	NC_004741.1	1978515	1978880	D	binds flagellar cap subunits (FliD) and seems to prevents their oligomerization prior to its translocation through the flagellum-specific type III export pathway; acts as a repressor of flagellar class 2 operons by preventing FlhD2C2 to bind the promoter and inhibiting the FlhD2C2-dependent transcription; member of the type III cytoplasmic chaperone family; flagellar biosynthesis protein FliT	1978515..1978880	Shigella flexneri 2a str. 2457T	1078380
NP_837540.1	CDS	amyA	NC_004741.1	1978958	1980445	D	converts 1,4-alpha-D-glucans to maltodextrin; alpha-amylase	1978958..1980445	Shigella flexneri 2a str. 2457T	1077340
NP_837541.1	CDS	yedD	NC_004741.1	1980479	1980892	R	residues 16 to 137 of 137 are 99.18 pct identical to residues 16 to 137 of 137 from Escherichia coli K-12 : B1928; hypothetical protein	complement(1980479..1980892)	Shigella flexneri 2a str. 2457T	1078381
NP_837542.1	CDS	yedE	NC_004741.1	1981079	1982284	D	residues 1 to 401 of 401 are 86.78 pct identical to residues 1 to 401 of 401 from Escherichia coli K-12 : B1929; inner membrane protein	1981079..1982284	Shigella flexneri 2a str. 2457T	1076455
NP_837543.1	CDS	yedF	NC_004741.1	1982281	1982514	D	residues 1 to 77 of 77 are 100.00 pct identical to residues 1 to 77 of 77 from Escherichia coli K-12 : B1930; hypothetical protein	1982281..1982514	Shigella flexneri 2a str. 2457T	1078382
NP_837544.1	CDS	S2072	NC_004741.1	1983331	1984137	R	residues 1 to 268 of 268 are 97.76 pct identical to residues 135 to 402 of 402 from GenPept : >gb|AAG57523.1|AE005470_10 (AE005470)  virulence protein [Escherichia coli O157:H7 EDL933]; virulence protein	complement(1983331..1984137)	Shigella flexneri 2a str. 2457T	1078383
NP_837545.1	CDS	nmpC	NC_004741.1	1985546	1986628	D	residues 1 to 360 of 360 are 84.65 pct identical to residues 1 to 365 of 365 from GenPept : >gb|AAA32301.1| (J02580) outer membrane porin protein [Bacteriophage PA-2]; outer membrane porin protein C precurser	1985546..1986628	Shigella flexneri 2a str. 2457T	1078384
NP_837546.1	CDS	S4819	NC_004741.1	1987178	1987915	R	residues 1 to 245 of 245 are 100.00 pct identical to residues 1 to 245 of 245 from NRprotein_Feb03 : >ref|NP_707820.1|  ARAC-type regulatory protein [Shigella flexneri 2a str. 301] gb|AAN43527.1|AE015216_2  ARAC-type regulatory protein [Shigella flexneri 2a str. 301]; regulator	complement(1987178..1987915)	Shigella flexneri 2a str. 2457T	1076461
NP_837547.1	CDS	ybcL	NC_004741.1	1987925	1988476	R	DLP12 prophage; similar to PEBP/RK1P protein family in eukaryotes that inhibits MEK phosphorylation by Raf-1; crystal structure suggests similar properties but exact function is unknown; kinase inhibitor	complement(1987925..1988476)	Shigella flexneri 2a str. 2457T	1078386
NP_837548.1	CDS	emrE	NC_004741.1	1988645	1988977	R	member of the small MDR (multidrug resistance) family of transporters; in Escherichia coli this protein provides resistance against a number of positively charged compounds including ethidium bromide and erythromycin; proton-dependent secondary transporter which exchanges protons for compound translocation; multidrug efflux protein	complement(1988645..1988977)	Shigella flexneri 2a str. 2457T	1078419
NP_837549.1	CDS	fliE	NC_004741.1	1989322	1989636	R	forms a junction between the M-ring and FlgB during flagella biosynthesis; flagellar hook-basal body protein FliE	complement(1989322..1989636)	Shigella flexneri 2a str. 2457T	1078390
NP_837550.1	CDS	fliG	NC_004741.1	1991502	1992497	D	One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G	1991502..1992497	Shigella flexneri 2a str. 2457T	1078393
NP_837551.1	CDS	fliH	NC_004741.1	1992490	1993176	D	binds to and inhibits the function of flagella specific ATPase FliI; flagellar assembly protein H	1992490..1993176	Shigella flexneri 2a str. 2457T	1079810
NP_837552.1	CDS	fliI	NC_004741.1	1993176	1994549	D	involved in type III protein export during flagellum assembly; flagellum-specific ATP synthase	1993176..1994549	Shigella flexneri 2a str. 2457T	1078394
NP_837553.1	CDS	fliK	NC_004741.1	1994909	1996036	D	residues 1 to 375 of 375 are 93.86 pct identical to residues 1 to 375 of 375 from Escherichia coli K-12 : B1943; flagellar hook-length control protein	1994909..1996036	Shigella flexneri 2a str. 2457T	1079013
NP_837554.1	CDS	fliL	NC_004741.1	1996141	1996605	D	interacts with cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring; flagellar basal body-associated protein FliL	1996141..1996605	Shigella flexneri 2a str. 2457T	1078398
NP_837555.1	CDS	fliM	NC_004741.1	1996610	1997614	D	with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; flagellar motor switch protein FliM	1996610..1997614	Shigella flexneri 2a str. 2457T	1076460
NP_837556.1	CDS	fliN	NC_004741.1	1997611	1998024	D	One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein FliN	1997611..1998024	Shigella flexneri 2a str. 2457T	1078399
NP_837557.2	CDS	fliO	NC_004741.1	1998027	1998392	D	with FlhA, FlhB, FliP, FliQ and FliR is one of the membrane components of the flagellar export apparatus; flagellar biosynthesis protein FliO	1998027..1998392	Shigella flexneri 2a str. 2457T	1078400
NP_837558.1	CDS	fliQ	NC_004741.1	1999167	1999436	D	with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliQ	1999167..1999436	Shigella flexneri 2a str. 2457T	1078402
NP_837559.1	CDS	fliR	NC_004741.1	1999445	2000230	D	FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliR	1999445..2000230	Shigella flexneri 2a str. 2457T	1078403
NP_837560.1	CDS	rcsA	NC_004741.1	2000515	2001138	D	residues 1 to 207 of 207 are 99.51 pct identical to residues 1 to 207 of 207 from Escherichia coli K-12 : B1951; positive regulator for ctr capsule biosynthesis, positive transcription factor	2000515..2001138	Shigella flexneri 2a str. 2457T	1076708
NP_837561.1	CDS	dsrB	NC_004741.1	2001182	2001370	R	residues 1 to 62 of 62 are 98.38 pct identical to residues 1 to 62 of 62 from Escherichia coli K-12 : B1952; hypothetical protein	complement(2001182..2001370)	Shigella flexneri 2a str. 2457T	1078404
NP_837562.1	CDS	S2092	NC_004741.1	2001533	2001760	D	residues 1 to 75 of 75 are 98.66 pct identical to residues 6 to 80 of 80 from Escherichia coli K-12 : B1953; hypothetical protein	2001533..2001760	Shigella flexneri 2a str. 2457T	1078406
NP_837563.1	CDS	S2096	NC_004741.1	2004735	2004917	R	residues 1 to 60 of 60 are 98.33 pct identical to residues 1 to 60 of 60 from Escherichia coli K-12 : B1957; hypothetical protein	complement(2004735..2004917)	Shigella flexneri 2a str. 2457T	1078413
NP_837564.1	CDS	yedI	NC_004741.1	2004996	2005913	R	residues 23 to 305 of 305 are 87.98 pct identical to residues 23 to 305 of 305 from Escherichia coli K-12 : B1958; hypothetical protein	complement(2004996..2005913)	Shigella flexneri 2a str. 2457T	1079036
NP_837565.1	CDS	yedA	NC_004741.1	2006086	2007006	D	residues 1 to 306 of 306 are 83.33 pct identical to residues 1 to 306 of 306 from Escherichia coli K-12 : B1959; hypothetical protein	2006086..2007006	Shigella flexneri 2a str. 2457T	1078414
NP_837566.1	CDS	vsr	NC_004741.1	2006995	2007465	R	residues 1 to 156 of 156 are 98.07 pct identical to residues 1 to 156 of 156 from Escherichia coli K-12 : B1960; DNA mismatch endonuclease, patch repair protein	complement(2006995..2007465)	Shigella flexneri 2a str. 2457T	1078415
NP_837567.1	CDS	dcm	NC_004741.1	2007446	2008864	R	residues 1 to 472 of 472 are 99.15 pct identical to residues 1 to 472 of 472 from Escherichia coli K-12 : B1961; DNA cytosine methylase	complement(2007446..2008864)	Shigella flexneri 2a str. 2457T	1080935
NP_837568.1	CDS	S2103	NC_004741.1	2009769	2010581	R	residues 1 to 270 of 270 are 95.55 pct identical to residues 10 to 279 of 279 from GenPept : >gb|AAG53988.1|AF327445_2 (AF327445)  transposase B [Pantoea agglomerans]; ISEhe3 orfB	complement(2009769..2010581)	Shigella flexneri 2a str. 2457T	1078418
NP_837569.1	CDS	S2104	NC_004741.1	2010638	2010916	R	residues 1 to 92 of 92 are 92.39 pct identical to residues 3 to 94 of 94 from GenPept : >gb|AAG53987.1|AF327445_1 (AF327445)  transposase A [Pantoea agglomerans]; ISEhe3 orfA	complement(2010638..2010916)	Shigella flexneri 2a str. 2457T	1078417
NP_837570.1	CDS	S2105	NC_004741.1	2010943	2011830	D	residues 31 to 267 of 295 are 59.18 pct identical to residues 53 to 296 of 351 from GenPept : >emb|CAA23605.1| (V00316) phoE protein [Escherichia coli]; outer membrane pore protein	2010943..2011830	Shigella flexneri 2a str. 2457T	1078420
NP_837571.2	CDS	S2106	NC_004741.1	2011755	2012660	R	IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats; insertion element IS2 transposase InsD	complement(2011755..2012660)	Shigella flexneri 2a str. 2457T	1078421
NP_837572.2	CDS	S2107	NC_004741.1	2012618	2012983	R	IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats; insertion sequence 2 OrfA protein	complement(2012618..2012983)	Shigella flexneri 2a str. 2457T	1078422
NP_837573.1	CDS	S2108	NC_004741.1	2013047	2013256	D	residues 2 to 69 of 69 are 61.76 pct identical to residues 298 to 359 of 359 from GenPept : >emb|CAA09665.1| (AJ011501) OmpK35 porin [Klebsiella pneumoniae]; outer membrane protein	2013047..2013256	Shigella flexneri 2a str. 2457T	1078423
NP_837574.1	CDS	S2109	NC_004741.1	2013884	2014159	D	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	2013884..2014159	Shigella flexneri 2a str. 2457T	1078424
NP_837575.1	CDS	S2110	NC_004741.1	2014078	2014581	D	residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri]; IS1 orfB	2014078..2014581	Shigella flexneri 2a str. 2457T	1078433
NP_837576.1	CDS	yedU	NC_004741.1	2014627	2015499	D	Hsp31 stabilizes early unfolding protein intermediates under severe heat stress; chaperone protein HchA	2014627..2015499	Shigella flexneri 2a str. 2457T	1078425
NP_837577.1	CDS	yedV	NC_004741.1	2015585	2016943	R	residues 1 to 452 of 452 are 93.14 pct identical to residues 1 to 452 of 452 from Escherichia coli K-12 : B1968; 2-component sensor protein	complement(2015585..2016943)	Shigella flexneri 2a str. 2457T	1078407
NP_837578.1	CDS	yedW	NC_004741.1	2016943	2017614	R	induced by CusR in the presence of copper; YedW induces the expression of the upstream gene yedV (encoding a sensor kinase) as well as yedW; yedVW is one of four copper regulons found in E. coli; part of the copper homeostasis mechanism; confers resistance to copper and several drugs when induced; transcriptional regulatory protein YedW	complement(2016943..2017614)	Shigella flexneri 2a str. 2457T	1078427
NP_837579.1	CDS	S2114	NC_004741.1	2017747	2018160	D	residues 1 to 137 of 137 are 99.27 pct identical to residues 1 to 137 of 137 from Escherichia coli K-12 : B1970; hypothetical protein	2017747..2018160	Shigella flexneri 2a str. 2457T	1076469
NP_837580.1	CDS	S2116	NC_004741.1	2019274	2019909	D	in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY; sulfite oxidase activity not demonstrated; contains heme; sulfite oxidase subunit YedZ	2019274..2019909	Shigella flexneri 2a str. 2457T	1078429
NP_837581.1	CDS	S2117	NC_004741.1	2020167	2020817	D	residues 2 to 205 of 217 are 92.64 pct identical to residues 1 to 204 of 216 from Escherichia coli K-12 : B1973; hypothetical protein	2020167..2020817	Shigella flexneri 2a str. 2457T	1078431
NP_837582.1	CDS	S2118	NC_004741.1	2021895	2022164	R	residues 1 to 77 of 89 are 92.20 pct identical to residues 1 to 77 of 82 from GenPept : >gb|AAG56015.1|AE005334_2 (AE005334) unknown protein encoded by prophage CP-933X [Escherichia coli O157:H7 EDL933]; bacteriophage protein	complement(2021895..2022164)	Shigella flexneri 2a str. 2457T	1078432
NP_837583.1	CDS	ipaH_5	NC_004741.1	2023205	2024848	D	residues 1 to 547 of 547 are 72.48 pct identical to residues 1 to 565 of 565 from NRprotein_Feb03 : >ref|NP_085238.1| invasion plasmid antigen [Shigella flexneri] emb|CAC05787.1| IpaH7.8, member of the IpaH family, secreted by the Mxi-Spa secretion machinery, function unknown [Shigella flexneri]; invasion plasmid antigen	2023205..2024848	Shigella flexneri 2a str. 2457T	1078434
NP_837584.1	CDS	S2121	NC_004741.1	2025028	2025405	R	residues 1 to 125 of 125 are 68.80 pct identical to residues 64 to 188 of 188 from GenPept : >emb|CAC83575.1| (AJ298298) hypothetical protein [Bacteriophage P27]; hypothetical protein	complement(2025028..2025405)	Shigella flexneri 2a str. 2457T	1078435
NP_837585.1	CDS	S2122	NC_004741.1	2026462	2026737	D	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	2026462..2026737	Shigella flexneri 2a str. 2457T	1078437
NP_837586.1	CDS	S2123	NC_004741.1	2026656	2027159	D	residues 1 to 97 of 97 are 82.47 pct identical to residues 71 to 167 of 167 from GenPept : >gb|AAK18549.1|AF348706_238 (AF348706) iso-IS1 orfB [Shigella flexneri]; IS1 orfB	2026656..2027159	Shigella flexneri 2a str. 2457T	1078438
NP_837587.1	CDS	S2124	NC_004741.1	2027802	2029751	R	residues 1 to 649 of 649 are 85.20 pct identical to residues 1 to 649 of 649 from GenPept : >emb|CAC83565.1| (AJ298298)  tail protein [Bacteriophage P27]; tail protein	complement(2027802..2029751)	Shigella flexneri 2a str. 2457T	1078439
NP_837588.1	CDS	S2126	NC_004741.1	2029836	2030171	R	residues 3 to 111 of 111 are 97.24 pct identical to residues 1 to 109 of 109 from GenPept : >emb|CAC83564.1| (AJ298298) hypothetical protein [Bacteriophage P27]; bacteriophage protein	complement(2029836..2030171)	Shigella flexneri 2a str. 2457T	1078440
NP_837589.1	CDS	S2127	NC_004741.1	2030171	2030527	R	residues 1 to 118 of 118 are 98.30 pct identical to residues 1 to 118 of 118 from GenPept : >emb|CAC83563.1| (AJ298298) hypothetical protein [Bacteriophage P27]; hypothetical protein	complement(2030171..2030527)	Shigella flexneri 2a str. 2457T	1078441
NP_837590.1	CDS	S2128	NC_004741.1	2030527	2032023	R	residues 1 to 498 of 498 are 91.16 pct identical to residues 1 to 498 of 498 from GenPept : >emb|CAC83562.1| (AJ298298)  sheath protein [Bacteriophage P27]; sheath protein	complement(2030527..2032023)	Shigella flexneri 2a str. 2457T	1078442
NP_837591.1	CDS	S2129	NC_004741.1	2032191	2032445	R	residues 1 to 83 of 84 are 98.79 pct identical to residues 104 to 186 of 187 from GenPept : >emb|CAC83561.1| (AJ298298) hypothetical protein [Bacteriophage P27]; hypothetical protein	complement(2032191..2032445)	Shigella flexneri 2a str. 2457T	1078443
NP_837592.1	CDS	S2130	NC_004741.1	2032575	2033288	R	residues 1 to 237 of 237 are 91.13 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAL72453.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS600 orfB	complement(2032575..2033288)	Shigella flexneri 2a str. 2457T	1078445
NP_837593.1	CDS	S2131	NC_004741.1	2033429	2033731	R	residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAL72452.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS600 orfA	complement(2033429..2033731)	Shigella flexneri 2a str. 2457T	1078446
NP_837594.1	CDS	S2133	NC_004741.1	2034606	2034956	R	residues 1 to 116 of 116 are 100.00 pct identical to residues 1 to 116 of 116 from GenPept : >gb|AAK18528.1|AF348706_217 (AF348706)  IS orf [Shigella flexneri]; partial; ISSfl3 orfB	complement(2034606..2034956)	Shigella flexneri 2a str. 2457T	1078447
NP_837595.1	CDS	S2134	NC_004741.1	2034953	2035450	R	residues 1 to 165 of 165 are 99.39 pct identical to residues 60 to 224 of 224 from GenPept : >gb|AAL72464.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; ISSfl3 orfA	complement(2034953..2035450)	Shigella flexneri 2a str. 2457T	1078449
NP_837596.1	CDS	S2139	NC_004741.1	2036742	2037425	R	residues 1 to 227 of 227 are 92.95 pct identical to residues 1 to 227 of 229 from GenPept : >gb|AAK16973.1|AE006460_11 (AE006460)  Q antiterminator encoded by prophage CP-933P [Escherichia coli O157:H7 EDL933]; Q antiterminator of prophage	complement(2036742..2037425)	Shigella flexneri 2a str. 2457T	1076436
NP_837597.1	CDS	S2140	NC_004741.1	2037422	2037787	R	residues 4 to 121 of 121 are 96.61 pct identical to residues 2 to 119 of 119 from GenPept : >gb|AAK16974.1|AE006460_12 (AE006460)  endonuclease encoded by cryptic prophage CP-933P [Escherichia coli O157:H7 EDL933]; crossover junction endodeoxyribonuclease	complement(2037422..2037787)	Shigella flexneri 2a str. 2457T	1078451
NP_837598.1	CDS	S2142	NC_004741.1	2037788	2038774	R	residues 1 to 324 of 328 are 79.32 pct identical to residues 25 to 347 of 348 from GenPept : >dbj|BAB35199.1| (AP002556) hypothetical protein [Escherichia coli O157:H7]; hypothetical protein	complement(2037788..2038774)	Shigella flexneri 2a str. 2457T	1078452
NP_837599.1	CDS	S2141	NC_004741.1	2038773	2039252	D	residues 53 to 159 of 159 are 96.26 pct identical to residues 1 to 107 of 107 from GenPept : >gb|AAG57026.1|AE005422_1 (AE005422) unknown protein encoded within prophage CP-933U [Escherichia coli O157:H7 EDL933]; hypothetical protein	2038773..2039252	Shigella flexneri 2a str. 2457T	1079750
NP_837600.1	CDS	S2143	NC_004741.1	2039294	2039506	R	residues 1 to 70 of 70 are 81.42 pct identical to residues 1 to 70 of 70 from GenPept : >gb|AAK16976.1|AE006461_1 (AE006461)  cell killing protein encoded within cryptic prophage CP-933P [Escherichia coli O157:H7 EDL933]; cell killing protein of prophage	complement(2039294..2039506)	Shigella flexneri 2a str. 2457T	1078453
NP_837601.1	CDS	S2144	NC_004741.1	2040101	2040436	R	residues 4 to 93 of 111 are 37.25 pct identical to residues 28 to 122 of 151 from GenPept : >dbj|BAB12619.1| (AP002527) ycgB [Escherichia coli]; hypothetical protein	complement(2040101..2040436)	Shigella flexneri 2a str. 2457T	1078454
NP_837602.1	CDS	S2145	NC_004741.1	2040562	2040684	D	residues 1 to 40 of 40 are 85.00 pct identical to residues 28 to 67 of 67 from GenPept : >dbj|BAB36195.1| (AP002559) hypothetical protein [Escherichia coli O157:H7]; hypothetical protein	2040562..2040684	Shigella flexneri 2a str. 2457T	1080982
NP_837603.1	CDS	S2146	NC_004741.1	2040864	2041709	D	residues 1 to 281 of 281 are 93.23 pct identical to residues 60 to 340 of 340 from GenPept : >gb|AAG57039.1|AE005423_1 (AE005423)  integrase for prophage CP-933U [Escherichia coli O157:H7 EDL933]; integrase for prophage CP-933U	2040864..2041709	Shigella flexneri 2a str. 2457T	1078455
NP_837604.1	CDS	S2148	NC_004741.1	2041906	2042742	D	residues 1 to 278 of 278 are 98.92 pct identical to residues 1 to 278 of 278 from Escherichia coli K-12 : B1976; hypothetical protein	2041906..2042742	Shigella flexneri 2a str. 2457T	1078468
NP_837605.1	CDS	S2152	NC_004741.1	2043593	2044342	D	residues 1 to 249 of 249 are 95.18 pct identical to residues 56 to 304 of 304 from GenPept : >emb|CAB59975.1| (AJ245585) integrase [Escherichia coli]; integrase	2043593..2044342	Shigella flexneri 2a str. 2457T	1079040
NP_837606.1	CDS	S2155	NC_004741.1	2045315	2045545	R	residues 1 to 76 of 76 are 98.68 pct identical to residues 37 to 112 of 112 from GenPept : >gb|AAL72382.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; partial; IS911 orfA	complement(2045315..2045545)	Shigella flexneri 2a str. 2457T	1078240
NP_837607.1	CDS	S2157	NC_004741.1	2046243	2046545	D	residues 1 to 100 of 100 are 99.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAK18566.1|AF348706_255 (AF348706) IS600 orfA [Shigella flexneri]; IS600 orfA	2046243..2046545	Shigella flexneri 2a str. 2457T	1078462
NP_837608.1	CDS	S2158	NC_004741.1	2046686	2047399	D	residues 1 to 237 of 237 are 99.57 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAL72454.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS600 orfB	2046686..2047399	Shigella flexneri 2a str. 2457T	1078463
NP_837609.1	CDS	amn	NC_004741.1	2047751	2049205	D	Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile; AMP nucleosidase	2047751..2049205	Shigella flexneri 2a str. 2457T	1078465
NP_837610.1	CDS	S2161	NC_004741.1	2049548	2050264	D	residues 1 to 238 of 238 are 99.57 pct identical to residues 1 to 238 of 238 from Escherichia coli K-12 : B1983; hypothetical protein	2049548..2050264	Shigella flexneri 2a str. 2457T	1078466
NP_837611.1	CDS	cbl	NC_004741.1	2052641	2053591	R	LysR-type transcriptional regulator similar to CysB; contains helix-turn-helix (HTH) motif; in Escherichia coli this protein regulates two operons consisting of ABC transporters that are part of the cys regulon; regulated by CysB; transcriptional regulator Cbl	complement(2052641..2053591)	Shigella flexneri 2a str. 2457T	1078471
NP_837612.1	CDS	nac	NC_004741.1	2053693	2054610	R	Transcriptional activator for the hut, put and ure operons and repressor for the gdh and gltB operons in response to nitrogen limitation; nitrogen assimilation transcriptional regulator	complement(2053693..2054610)	Shigella flexneri 2a str. 2457T	1078472
NP_837613.1	CDS	erfK	NC_004741.1	2055069	2056004	R	residues 2 to 311 of 311 are 97.41 pct identical to residues 1 to 310 of 310 from Escherichia coli K-12 : B1990; hypothetical protein	complement(2055069..2056004)	Shigella flexneri 2a str. 2457T	1078474
NP_837614.1	CDS	cobT	NC_004741.1	2056066	2057145	R	catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	complement(2056066..2057145)	Shigella flexneri 2a str. 2457T	1078475
NP_837615.1	CDS	cobS	NC_004741.1	2057157	2057900	R	catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole; cobalamin synthase	complement(2057157..2057900)	Shigella flexneri 2a str. 2457T	1078504
NP_837616.1	CDS	S2172	NC_004741.1	2058418	2059131	R	residues 1 to 237 of 237 are 91.13 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAL72453.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS600 orfB	complement(2058418..2059131)	Shigella flexneri 2a str. 2457T	1078502
NP_837617.1	CDS	S2173	NC_004741.1	2059272	2059574	R	residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAF09029.1| (AF139596) unknown [Shigella flexneri]; IS600 orfA	complement(2059272..2059574)	Shigella flexneri 2a str. 2457T	1078478
NP_837618.1	CDS	is629a	NC_004741.1	2059817	2060143	D	residues 1 to 108 of 108 are 89.81 pct identical to residues 1 to 108 of 108 from GenPept : >gb|AAL72412.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS629 orfA	2059817..2060143	Shigella flexneri 2a str. 2457T	1078483
NP_837619.1	CDS	is629b	NC_004741.1	2060379	2061026	D	residues 1 to 215 of 215 are 99.06 pct identical to residues 8 to 222 of 222 from GenPept : >gb|AAL72361.1| (AF386526) transposase [Shigella flexneri 2a]; IS629 orfB	2060379..2061026	Shigella flexneri 2a str. 2457T	1078484
NP_837620.1	CDS	yeeX	NC_004741.1	2061887	2062282	R	residues 1 to 131 of 131 are 100.00 pct identical to residues 1 to 131 of 131 from Escherichia coli K-12 : B2007; hypothetical protein	complement(2061887..2062282)	Shigella flexneri 2a str. 2457T	1078480
NP_837621.1	CDS	S2179	NC_004741.1	2062757	2063431	D	residues 1 to 224 of 224 are 100.00 pct identical to residues 1 to 224 of 224 from GenPept : >gb|AAL72464.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; ISSfl3 orfA	2062757..2063431	Shigella flexneri 2a str. 2457T	1078486
NP_837622.1	CDS	S2180	NC_004741.1	2063428	2063640	D	residues 1 to 57 of 70 are 100.00 pct identical to residues 1 to 57 of 115 from GenPept : >gb|AAL72465.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; ISSfl3 orfB	2063428..2063640	Shigella flexneri 2a str. 2457T	1076977
NP_837623.1	CDS	S2181	NC_004741.1	2063643	2064161	R	residues 1 to 172 of 172 are 98.83 pct identical to residues 35 to 206 of 206 from GenPept : >gb|AAD44736.1|AF141323_7 (AF141323) TnpC [Shigella flexneri]; IS629 orfA	complement(2063643..2064161)	Shigella flexneri 2a str. 2457T	1078487
NP_837624.1	CDS	S2182	NC_004741.1	2064173	2064526	R	residues 1 to 117 of 117 are 100.00 pct identical to residues 1 to 117 of 117 from GenPept : >gb|AAK18555.1|AF348706_244 (AF348706) IS629 orf [Shigella flexneri]; IS629 orfB	complement(2064173..2064526)	Shigella flexneri 2a str. 2457T	1078507
NP_837625.1	CDS	S2184	NC_004741.1	2065084	2066685	D	residues 1 to 533 of 533 are 97.37 pct identical to residues 1 to 533 of 533 from GenPept : >gb|AAL72472.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; ISSfl3 orfC	2065084..2066685	Shigella flexneri 2a str. 2457T	1079406
NP_837626.1	CDS	S2185	NC_004741.1	2066754	2067068	D	residues 13 to 95 of 104 are 34.88 pct identical to residues 325 to 410 of 416 from GenPept : >gb|AAL09885.1| (AY048727) integrase [CRIM helper plasmid pAH129]; hypothetical protein	2066754..2067068	Shigella flexneri 2a str. 2457T	1078488
NP_837627.1	CDS	S2187	NC_004741.1	2067528	2067776	R	residues 1 to 82 of 82 are 97.56 pct identical to residues 452 to 533 of 533 from GenPept : >gb|AAL72472.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; partial; ISSfl3 orfD	complement(2067528..2067776)	Shigella flexneri 2a str. 2457T	1078490
NP_837628.1	CDS	S2189	NC_004741.1	2068553	2069125	R	residues 1 to 190 of 190 are 93.15 pct identical to residues 1 to 190 of 190 from GenPept : >gb|AAK18527.1|AF348706_216 (AF348706)  IS orf [Shigella flexneri]; ISSfl3 orfC	complement(2068553..2069125)	Shigella flexneri 2a str. 2457T	1078811
NP_837629.1	CDS	S2190	NC_004741.1	2069122	2069472	R	residues 1 to 116 of 116 are 100.00 pct identical to residues 1 to 116 of 116 from GenPept : >gb|AAL72462.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; ISSfl3 orfB	complement(2069122..2069472)	Shigella flexneri 2a str. 2457T	1078491
NP_837630.1	CDS	S2191	NC_004741.1	2069469	2069966	R	residues 1 to 165 of 165 are 99.39 pct identical to residues 60 to 224 of 224 from GenPept : >gb|AAL72464.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; ISSfl3 orfA	complement(2069469..2069966)	Shigella flexneri 2a str. 2457T	1079728
NP_837631.1	CDS	sbcB	NC_004741.1	2071243	2072667	D	Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates; exonuclease I	2071243..2072667	Shigella flexneri 2a str. 2457T	1078492
NP_837632.1	CDS	yeeD	NC_004741.1	2072710	2072937	R	residues 1 to 75 of 75 are 97.33 pct identical to residues 1 to 75 of 75 from Escherichia coli K-12 : B2012; hypothetical protein	complement(2072710..2072937)	Shigella flexneri 2a str. 2457T	1078408
NP_837633.1	CDS	yeeE	NC_004741.1	2072951	2074009	R	residues 1 to 352 of 352 are 93.18 pct identical to residues 1 to 352 of 352 from Escherichia coli K-12 : B2013; transport system permease	complement(2072951..2074009)	Shigella flexneri 2a str. 2457T	1078493
NP_837634.1	CDS	yeeF	NC_004741.1	2074188	2075546	R	residues 1 to 452 of 452 are 89.82 pct identical to residues 3 to 454 of 454 from Escherichia coli K-12 : B2014; amino acid/amine transport protein	complement(2074188..2075546)	Shigella flexneri 2a str. 2457T	1077380
NP_837635.1	CDS	yeeY	NC_004741.1	2075759	2076742	R	residues 1 to 309 of 327 are 99.35 pct identical to residues 8 to 316 of 316 from Escherichia coli K-12 : B2015; LYSR-type transcriptional regulator	complement(2075759..2076742)	Shigella flexneri 2a str. 2457T	1078495
NP_837636.1	CDS	S2198	NC_004741.1	2076788	2077612	R	residues 1 to 274 of 274 are 94.52 pct identical to residues 1 to 274 of 274 from Escherichia coli K-12 : B2016; enzyme of sugar metabolism	complement(2076788..2077612)	Shigella flexneri 2a str. 2457T	1078496
NP_837637.1	CDS	S2199	NC_004741.1	2077971	2078264	R	residues 1 to 97 of 97 are 82.47 pct identical to residues 71 to 167 of 167 from GenPept : >gb|AAL72450.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; partial; IS1 orfB	complement(2077971..2078264)	Shigella flexneri 2a str. 2457T	1078497
NP_837638.1	CDS	S2200	NC_004741.1	2078392	2078667	R	residues 1 to 91 of 91 are 98.90 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(2078392..2078667)	Shigella flexneri 2a str. 2457T	1078498
NP_837639.1	CDS	yefM	NC_004741.1	2078701	2078973	R	Antitoxin that counteracts the effect of the YoeB toxin; antitoxin YefM	complement(2078701..2078973)	Shigella flexneri 2a str. 2457T	1078481
NP_837640.1	CDS	hisG	NC_004741.1	2079443	2080342	D	long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; ATP phosphoribosyltransferase	2079443..2080342	Shigella flexneri 2a str. 2457T	1078501
NP_837641.1	CDS	hisD	NC_004741.1	2080348	2081652	D	catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase	2080348..2081652	Shigella flexneri 2a str. 2457T	1078511
NP_837642.1	CDS	hisC	NC_004741.1	2081649	2082719	D	catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase	2081649..2082719	Shigella flexneri 2a str. 2457T	1078503
NP_837643.1	CDS	hisB	NC_004741.1	2082719	2083786	D	catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate; imidazole glycerol-phosphate dehydratase/histidinol phosphatase	2082719..2083786	Shigella flexneri 2a str. 2457T	1078505
NP_837644.1	CDS	hisH	NC_004741.1	2083786	2084376	D	with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH	2083786..2084376	Shigella flexneri 2a str. 2457T	1078489
NP_837645.1	CDS	hisA	NC_004741.1	2084376	2085113	D	catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase	2084376..2085113	Shigella flexneri 2a str. 2457T	1078508
NP_837646.1	CDS	hisF	NC_004741.1	2085095	2085871	D	catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF	2085095..2085871	Shigella flexneri 2a str. 2457T	1076502
NP_837647.1	CDS	hisI	NC_004741.1	2085865	2086476	D	catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP	2085865..2086476	Shigella flexneri 2a str. 2457T	1078510
NP_837648.1	CDS	wzzB	NC_004741.1	2086662	2087675	R	residues 1 to 337 of 337 are 82.24 pct identical to residues 1 to 338 of 338 from Escherichia coli K-12 : B2027; regulator of length of O-antigen component of lipopolysaccharide chains	complement(2086662..2087675)	Shigella flexneri 2a str. 2457T	1077593
NP_837649.1	CDS	gnd	NC_004741.1	2089155	2090561	R	catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase	complement(2089155..2090561)	Shigella flexneri 2a str. 2457T	1078514
NP_837650.1	CDS	S2213	NC_004741.1	2090670	2091029	R	residues 1 to 119 of 119 are 100.00 pct identical to residues 1 to 119 of 119 from GenPept : >emb|CAA50780.1| (X71970) ORG12x8 [Shigella flexneri]; hypothetical protein	complement(2090670..2091029)	Shigella flexneri 2a str. 2457T	1078515
NP_837651.1	CDS	S2214	NC_004741.1	2091026	2091577	R	residues 1 to 183 of 183 are 100.00 pct identical to residues 1 to 183 of 183 from GenPept : >emb|CAA50779.1| (X71970) ORG12x3 [Shigella flexneri]; hypothetical protein	complement(2091026..2091577)	Shigella flexneri 2a str. 2457T	1078516
NP_837652.1	CDS	S2215	NC_004741.1	2091678	2092277	R	residues 1 to 199 of 199 are 88.94 pct identical to residues 1 to 199 of 199 from GenPept : >emb|CAA50778.1| (X71970) ORF11x6 [Shigella flexneri]; hypothetical protein	complement(2091678..2092277)	Shigella flexneri 2a str. 2457T	1078517
NP_837653.1	CDS	S2216	NC_004741.1	2092448	2092939	R	residues 1 to 163 of 163 are 100.00 pct identical to residues 1 to 163 of 163 from GenPept : >emb|CAA50777.1| (X71970) ORF10x9 [Shigella flexneri]; hypothetical protein	complement(2092448..2092939)	Shigella flexneri 2a str. 2457T	1078519
NP_837654.1	CDS	rfbJ	NC_004741.1	2092997	2093386	R	residues 1 to 70 of 129 are 100.00 pct identical to residues 1 to 70 of 76 from GenPept : >emb|CAA50776.1| (X71970) rfbJ [Shigella flexneri]; glycosyl transferase	complement(2092997..2093386)	Shigella flexneri 2a str. 2457T	1078512
NP_837655.1	CDS	rfbI	NC_004741.1	2093449	2093823	R	residues 1 to 124 of 124 are 89.51 pct identical to residues 1 to 124 of 124 from GenPept : >emb|CAA50775.1| (X71970) rfbI [Shigella flexneri]; glycosyl translocase	complement(2093449..2093823)	Shigella flexneri 2a str. 2457T	1078520
NP_837656.1	CDS	rfc	NC_004741.1	2093827	2094975	R	residues 1 to 382 of 382 are 76.43 pct identical to residues 1 to 382 of 382 from GenPept : >emb|CAA50774.1| (X71970) rfc [Shigella flexneri]; O-antigen polymerase	complement(2093827..2094975)	Shigella flexneri 2a str. 2457T	1078521
NP_837657.1	CDS	rfbG	NC_004741.1	2094995	2095864	R	residues 1 to 289 of 289 are 100.00 pct identical to residues 1 to 289 of 289 from GenPept : >emb|CAA50773.1| (X71970) rfbG [Shigella flexneri]; dTDP-rhamnosyl transferase	complement(2094995..2095864)	Shigella flexneri 2a str. 2457T	1078499
NP_837658.1	CDS	rfbF	NC_004741.1	2095893	2096783	R	residues 1 to 296 of 296 are 100.00 pct identical to residues 1 to 296 of 296 from GenPept : >emb|CAA50772.1| (X71970) rfbF [Shigella flexneri]; dTDP-rhamnosyl transferase	complement(2095893..2096783)	Shigella flexneri 2a str. 2457T	1078523
NP_837659.1	CDS	rfbE	NC_004741.1	2096813	2098069	R	residues 1 to 418 of 418 are 99.52 pct identical to residues 1 to 418 of 418 from GenPept : >emb|CAA50771.1| (X71970) rfbE [Shigella flexneri]; polysaccharide biosynthesis protein	complement(2096813..2098069)	Shigella flexneri 2a str. 2457T	1078524
NP_837660.1	CDS	rfbC	NC_004741.1	2098085	2098630	R	residues 1 to 181 of 181 are 97.95 pct identical to residues 1 to 181 of 181 from GenPept : >emb|CAA50770.1| (X71970) rfbD [Shigella flexneri]; This protein is named RfbC in SW|P37780|, RfbD in >emb|CAA50770.1|; dTDP-6-deoxy-L-mannose-dehydrogenase	complement(2098085..2098630)	Shigella flexneri 2a str. 2457T	1078525
NP_837661.1	CDS	rfbA	NC_004741.1	2098634	2099512	R	residues 1 to 290 of 292 are 93.79 pct identical to residues 1 to 290 of 293 from Escherichia coli K-12 : B2039; glucose-1-phosphate thymidylyltransferase	complement(2098634..2099512)	Shigella flexneri 2a str. 2457T	1078526
NP_837662.1	CDS	rfbD	NC_004741.1	2099571	2100470	R	with dTDP-4-dehydrorhamnose 3,5-epimerase forms a complex known as dTDP-L-rhamnose synthetase; catalyzes the reduction of dTDP-4-dehydro-6-deoxy-L-mannose to dTDP-L-rhamnose; dTDP-4-dehydrorhamnose reductase	complement(2099571..2100470)	Shigella flexneri 2a str. 2457T	1078509
NP_837663.1	CDS	rfbB	NC_004741.1	2100470	2101555	R	NAD(P) binding; catalyzes the formation of dTDP-4-dehydro-6-deoxy-D-glucose from dTDP-glucose; dTDP-glucose 4,6 dehydratase	complement(2100470..2101555)	Shigella flexneri 2a str. 2457T	1078528
NP_837664.1	CDS	galF	NC_004741.1	2101928	2102821	R	together with GalU subunit composes the UTP--glucose-1-phosphate uridylyltransferase, an enzyme that catalyzes the formation of UDP-glucose from UTP and alpha-D-glucose 1-phosphate; regulates cellular levels of UDP-glucose; UTP--glucose-1-phosphate uridylyltransferase subunit GalF	complement(2101928..2102821)	Shigella flexneri 2a str. 2457T	1078506
NP_837665.1	CDS	wcaM	NC_004741.1	2102996	2104390	R	WcaM from Salmonella enterica is essential for biofilm formation on HEp-2 cells and chicken intestinal tissue but not on a plastic surface; may be involved in the biosynthesis of colanic acid; colanic acid biosynthesis protein	complement(2102996..2104390)	Shigella flexneri 2a str. 2457T	1078529
NP_837666.1	CDS	wcaL	NC_004741.1	2104401	2105621	R	residues 1 to 406 of 406 are 97.29 pct identical to residues 1 to 406 of 406 from Escherichia coli K-12 : B2044; colanic acid biosynthesis glycosyl transferase	complement(2104401..2105621)	Shigella flexneri 2a str. 2457T	1077666
NP_837667.1	CDS	wcaK	NC_004741.1	2105618	2106898	R	residues 1 to 426 of 426 are 98.12 pct identical to residues 1 to 426 of 426 from Escherichia coli K-12 : B2045; pyruvyl transferase	complement(2105618..2106898)	Shigella flexneri 2a str. 2457T	1078531
NP_837668.1	CDS	wzxC	NC_004741.1	2107078	2108556	R	residues 1 to 492 of 492 are 98.57 pct identical to residues 1 to 492 of 492 from Escherichia coli K-12 : B2046; colanic acid exporter	complement(2107078..2108556)	Shigella flexneri 2a str. 2457T	1078532
NP_837669.1	CDS	wcaJ	NC_004741.1	2108558	2109952	R	WcaJ; glucose-1-phosphate transferase responsible for the addition of the first glucose-1-phosphate from UDP-glucose to the lipid carrier undecaprenyl phosphate in the biosynthesis of colanic acid; UDP-glucose lipid carrier transferase	complement(2108558..2109952)	Shigella flexneri 2a str. 2457T	1078535
NP_837670.1	CDS	cpsG	NC_004741.1	2110007	2111377	R	residues 1 to 456 of 456 are 99.12 pct identical to residues 1 to 456 of 456 from Escherichia coli K-12 : B2048; phosphomannomutase	complement(2110007..2111377)	Shigella flexneri 2a str. 2457T	1078536
NP_837671.1	CDS	cpsB	NC_004741.1	2111570	2113006	R	residues 1 to 478 of 478 are 91.84 pct identical to residues 1 to 478 of 478 from Escherichia coli K-12 : B2049; mannose-1-phosphate guanyltransferase	complement(2111570..2113006)	Shigella flexneri 2a str. 2457T	1078231
NP_837672.1	CDS	wcaI	NC_004741.1	2113009	2114232	R	residues 1 to 407 of 407 are 95.57 pct identical to residues 1 to 407 of 407 from Escherichia coli K-12 : B2050; glycosyl transferase	complement(2113009..2114232)	Shigella flexneri 2a str. 2457T	1078537
NP_837673.1	CDS	wcaH	NC_004741.1	2114229	2114708	R	residues 1 to 159 of 159 are 96.85 pct identical to residues 2 to 160 of 160 from Escherichia coli K-12 : B2051; GDP-mannose mannosyl hydrolase	complement(2114229..2114708)	Shigella flexneri 2a str. 2457T	1078538
NP_837674.1	CDS	wcaG	NC_004741.1	2114708	2115676	R	residues 1 to 321 of 322 are 98.44 pct identical to residues 1 to 321 of 321 from Escherichia coli K-12 : B2052; nucleotide di-P-sugar epimerase or dehydratase	complement(2114708..2115676)	Shigella flexneri 2a str. 2457T	1076485
NP_837675.1	CDS	gmd	NC_004741.1	2115679	2116800	R	residues 1 to 373 of 373 are 100.00 pct identical to residues 1 to 373 of 373 from Escherichia coli K-12 : B2053; GDP-D-mannose dehydratase	complement(2115679..2116800)	Shigella flexneri 2a str. 2457T	1078539
NP_837676.1	CDS	wcaF	NC_004741.1	2116826	2117374	R	acetyltransferase believed to catalyze the addition of the acetyl group that is attached through an O linkage to the first fucosyl residue of the colanic acid repetitive unit (E unit); colanic acid biosynthesis acetyltransferase WcaF	complement(2116826..2117374)	Shigella flexneri 2a str. 2457T	1078540
NP_837677.1	CDS	S2242	NC_004741.1	2117570	2117845	D	residues 1 to 91 of 91 are 98.90 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	2117570..2117845	Shigella flexneri 2a str. 2457T	1078542
NP_837678.1	CDS	S2243	NC_004741.1	2117764	2118267	D	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri]; IS1 orfB	2117764..2118267	Shigella flexneri 2a str. 2457T	1078543
NP_837679.1	CDS	wcaB	NC_004741.1	2120292	2120780	R	acetyltransferase believed to catalyze the addition of the acetyl group that is attached through an O linkage to the first fucosyl residue of the colanic acid repetitive unit (E unit); wcaB is induced in sessile bacteria and by osmotic shock, and repressed when grown in rich medium; colanic acid biosynthesis acetyltransferase WcaB	complement(2120292..2120780)	Shigella flexneri 2a str. 2457T	1078547
NP_837680.2	CDS	S2248	NC_004741.1	2121715	2123877	R	Wzc; catalyzes the autophosphorylation on tyrosine residues which downregulates the biosynthesis of colonic acid (an extracellular polysaccharide); tyrosine kinase	complement(2121715..2123877)	Shigella flexneri 2a str. 2457T	1078551
NP_837681.1	CDS	wzb	NC_004741.1	2123880	2124323	R	Wzb shows phosphatase activity towards the autophosphorylated Wzc protein, which induces colanic acid biosynthesis; catalyzes the phosphorylation of UDP-glucose dehydrogenase, an enzyme involved in colanic acid biosynthesis; tyrosine phosphatase	complement(2123880..2124323)	Shigella flexneri 2a str. 2457T	1078552
NP_837682.1	CDS	wza	NC_004741.1	2124329	2125468	R	residues 13 to 379 of 379 are 99.72 pct identical to residues 13 to 379 of 379 from Escherichia coli K-12 : B2062; polysaccharide export protein	complement(2124329..2125468)	Shigella flexneri 2a str. 2457T	1078553
NP_837683.1	CDS	yegH	NC_004741.1	2126127	2127710	D	residues 1 to 527 of 527 are 95.82 pct identical to residues 23 to 549 of 549 from Escherichia coli K-12 : B2063; transporter	2126127..2127710	Shigella flexneri 2a str. 2457T	1078554
NP_837684.1	CDS	asmA	NC_004741.1	2128159	2130012	R	YegA; inner membrane protein involved in the assembly of outer membrane proteins (OMPs); asmA-null mutants show low lipopolysaccharide (LPS) levels, suggesting a role in LPS biogenesis and/or in restricting outer membrane fluidity, resulting on altered assembly of OMPs; assembly protein	complement(2128159..2130012)	Shigella flexneri 2a str. 2457T	1078555
NP_837685.1	CDS	dcd	NC_004741.1	2130034	2130615	R	Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase	complement(2130034..2130615)	Shigella flexneri 2a str. 2457T	1078006
NP_837686.1	CDS	udk	NC_004741.1	2130707	2131348	R	functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor; uridine kinase	complement(2130707..2131348)	Shigella flexneri 2a str. 2457T	1078556
NP_837687.1	CDS	S2256	NC_004741.1	2132110	2133306	R	residues 1 to 398 of 398 are 91.20 pct identical to residues 1 to 398 of 398 from GenPept : >gb|AAL72392.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; ISSfl4 orf	complement(2132110..2133306)	Shigella flexneri 2a str. 2457T	1078557
NP_837688.1	CDS	alkA	NC_004741.1	2136535	2137383	R	inducible, catalyzes the hydrolysis of alkylated DNA, releasing 3-methyladenine, 3-methylguanine, 7-methylguanine and 7-methyladenine; 3-methyladenine DNA glycosylase	complement(2136535..2137383)	Shigella flexneri 2a str. 2457T	1079358
NP_837689.1	CDS	S2261	NC_004741.1	2140818	2141579	R	residues 1 to 251 of 253 are 90.43 pct identical to residues 1 to 251 of 253 from Escherichia coli K-12 : B2072; hypothetical protein	complement(2140818..2141579)	Shigella flexneri 2a str. 2457T	1078560
NP_837690.1	CDS	S2262	NC_004741.1	2141576	2142235	R	residues 1 to 219 of 219 are 90.41 pct identical to residues 1 to 219 of 219 from Escherichia coli K-12 : B2073; hypothetical protein	complement(2141576..2142235)	Shigella flexneri 2a str. 2457T	1078561
NP_837691.1	CDS	issfl4	NC_004741.1	2142669	2143865	D	residues 1 to 398 of 398 are 87.43 pct identical to residues 1 to 398 of 398 from GenPept : >gb|AAL72391.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; ISSfl4 orf	2142669..2143865	Shigella flexneri 2a str. 2457T	1078562
NP_837692.1	CDS	yegO	NC_004741.1	2148042	2151107	D	Part of a tripartite efflux system composed of MdtA, MdtB and MdtC; confers resistance against novobiocin and deoxycholate; multidrug efflux system subunit MdtC	2148042..2151107	Shigella flexneri 2a str. 2457T	1078565
NP_837693.1	CDS	yegB	NC_004741.1	2151108	2152523	D	residues 1 to 471 of 471 are 85.56 pct identical to residues 1 to 471 of 471 from Escherichia coli K-12 : B2077; multidrug efflux system protein MdtE	2151108..2152523	Shigella flexneri 2a str. 2457T	1078566
NP_837694.1	CDS	baeS	NC_004741.1	2152520	2153923	D	residues 1 to 467 of 467 are 95.07 pct identical to residues 1 to 467 of 467 from Escherichia coli K-12 : B2078; signal transduction histidine-protein kinase BaeS	2152520..2153923	Shigella flexneri 2a str. 2457T	1078567
NP_837695.1	CDS	baeR	NC_004741.1	2153920	2154642	D	response regulator in two-component regulatory system with BaeS; regulator of RNA synthesis, flagellar biosynthesis, chemotaxis and transport; DNA-binding transcriptional regulator BaeR	2153920..2154642	Shigella flexneri 2a str. 2457T	1078568
NP_837696.1	CDS	S2270	NC_004741.1	2154794	2155165	D	residues 1 to 123 of 123 are 98.37 pct identical to residues 1 to 123 of 123 from Escherichia coli K-12 : B2080; hypothetical protein	2154794..2155165	Shigella flexneri 2a str. 2457T	1078569
NP_837697.1	CDS	yegQ	NC_004741.1	2155312	2156673	D	residues 1 to 453 of 453 are 96.46 pct identical to residues 1 to 453 of 453 from Escherichia coli K-12 : B2081; hypothetical protein	2155312..2156673	Shigella flexneri 2a str. 2457T	1078570
NP_837698.1	CDS	S2273	NC_004741.1	2157015	2157392	R	residues 1 to 125 of 125 are 87.19 pct identical to residues 1 to 125 of 125 from Escherichia coli K-12 : B2085; hypothetical protein	complement(2157015..2157392)	Shigella flexneri 2a str. 2457T	1078572
NP_837699.1	CDS	S2274	NC_004741.1	2157738	2158637	D	cytosolic protein with phosphatidylglycerol kinase activity; undetermined physiological role; lipid kinase	2157738..2158637	Shigella flexneri 2a str. 2457T	1078573
NP_837700.1	CDS	gatR	NC_004741.1	2158719	2159498	R	residues 1 to 259 of 259 are 99.22 pct identical to residues 1 to 259 of 259 from NRprotein_Feb03 : >ref|NP_416591.1| Galactitol utilization operon repressor [Escherichia coli K12] sp|P36930|GATR_ECOLI Galactitol utilization operon repressor; galactitol utilization operon repressor	complement(2158719..2159498)	Shigella flexneri 2a str. 2457T	1078575
NP_837701.1	CDS	gatD	NC_004741.1	2159598	2160638	R	Zn-dependent; NAD(P)-binding; catalyzes the formation of tagatose-6-phosphate from galactitol-1-phosphate; galactitol-1-phosphate dehydrogenase	complement(2159598..2160638)	Shigella flexneri 2a str. 2457T	1078577
NP_837702.1	CDS	S2278	NC_004741.1	2160671	2161174	R	residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri]; IS1 orfB	complement(2160671..2161174)	Shigella flexneri 2a str. 2457T	1078578
NP_837703.1	CDS	S2279	NC_004741.1	2161093	2161368	R	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(2161093..2161368)	Shigella flexneri 2a str. 2457T	1078579
NP_837704.1	CDS	gatC	NC_004741.1	2161463	2162818	R	residues 1 to 451 of 451 are 91.35 pct identical to residues 1 to 451 of 451 from Escherichia coli K-12 : B2092; PTS system galactitol-specific enzyme IIC	complement(2161463..2162818)	Shigella flexneri 2a str. 2457T	1079651
NP_837705.1	CDS	gatB	NC_004741.1	2162822	2163106	R	phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; galactitol-specific PTS system component IIB	complement(2162822..2163106)	Shigella flexneri 2a str. 2457T	1078580
NP_837706.1	CDS	gatA	NC_004741.1	2163137	2163589	R	phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; galactitol-specific PTS system component IIA	complement(2163137..2163589)	Shigella flexneri 2a str. 2457T	1078581
NP_837707.1	CDS	gatZ	NC_004741.1	2163599	2164861	R	residues 1 to 420 of 420 are 98.57 pct identical to residues 1 to 420 of 420 from Escherichia coli K-12 : B2095; tagatose 6-phosphate kinase 1	complement(2163599..2164861)	Shigella flexneri 2a str. 2457T	1078582
NP_837708.1	CDS	gatY	NC_004741.1	2164890	2165744	R	catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1,6-bisphosphate; in enteric bacteria there are two D-tagatose 1,6-bisphosphate-specific aldolases: KbaY (also called AgaY), involved in catabolism of N-acetyl-galactosamine and D-galactosamine, and GatY which is part of the galactitol catabolism pathway; tagatose-bisphosphate aldolase	complement(2164890..2165744)	Shigella flexneri 2a str. 2457T	1078583
NP_837709.1	CDS	S2285	NC_004741.1	2166052	2167104	R	catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate; fructose-bisphosphate aldolase	complement(2166052..2167104)	Shigella flexneri 2a str. 2457T	1078584
NP_837710.1	CDS	S2287	NC_004741.1	2168144	2169109	D	residues 1 to 321 of 321 are 88.16 pct identical to residues 1 to 321 of 321 from Escherichia coli K-12 : B2100; kinase	2168144..2169109	Shigella flexneri 2a str. 2457T	1078586
NP_837711.1	CDS	yegW	NC_004741.1	2169083	2169829	R	residues 1 to 248 of 248 are 100.00 pct identical to residues 1 to 248 of 248 from Escherichia coli K-12 : B2101; transcriptional regulator	complement(2169083..2169829)	Shigella flexneri 2a str. 2457T	1077931
NP_837712.1	CDS	yegX	NC_004741.1	2169877	2170698	R	residues 1 to 270 of 273 are 94.44 pct identical to residues 4 to 273 of 275 from Escherichia coli K-12 : B2102; hypothetical protein	complement(2169877..2170698)	Shigella flexneri 2a str. 2457T	1078587
NP_837713.1	CDS	thiD	NC_004741.1	2170763	2171563	R	catalyzes the formation of 4-amino-2-methyl-5-diphosphomethylpyrimidine; phosphomethylpyrimidine kinase	complement(2170763..2171563)	Shigella flexneri 2a str. 2457T	1078588
NP_837714.1	CDS	thiM	NC_004741.1	2171560	2172348	R	catalyzes the formation of 4-methyl-5-(2-phosphoethyl)-thiazole and ADP from 4-methyl-5-(2-hydroxyethyl)-thiazole and ATP; hydroxyethylthiazole kinase	complement(2171560..2172348)	Shigella flexneri 2a str. 2457T	1078589
NP_837715.1	CDS	yohL	NC_004741.1	2172571	2172843	R	residues 1 to 90 of 90 are 100.00 pct identical to residues 1 to 90 of 90 from Escherichia coli K-12 : B2105; hypothetical protein	complement(2172571..2172843)	Shigella flexneri 2a str. 2457T	1078590
NP_837716.1	CDS	yehB	NC_004741.1	2175483	2177963	R	residues 1 to 826 of 826 are 97.94 pct identical to residues 1 to 826 of 826 from Escherichia coli K-12 : B2109; outer membrane protein	complement(2175483..2177963)	Shigella flexneri 2a str. 2457T	1078594
NP_837717.1	CDS	yehD	NC_004741.1	2178734	2179258	R	residues 1 to 174 of 174 are 85.00 pct identical to residues 1 to 180 of 180 from Escherichia coli K-12 : B2111; fimbrial-like protein	complement(2178734..2179258)	Shigella flexneri 2a str. 2457T	1078596
NP_837718.1	CDS	S2299	NC_004741.1	2179534	2180037	R	residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri]; IS1 orfB	complement(2179534..2180037)	Shigella flexneri 2a str. 2457T	1078597
NP_837719.1	CDS	S2300	NC_004741.1	2179956	2180231	R	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(2179956..2180231)	Shigella flexneri 2a str. 2457T	1078598
NP_837720.1	CDS	yehE	NC_004741.1	2180328	2180609	R	residues 1 to 93 of 93 are 94.62 pct identical to residues 1 to 93 of 93 from Escherichia coli K-12 : B2112; hypothetical protein	complement(2180328..2180609)	Shigella flexneri 2a str. 2457T	1078599
NP_837721.1	CDS	mrp	NC_004741.1	2180871	2181980	R	residues 1 to 369 of 369 are 96.47 pct identical to residues 11 to 379 of 379 from Escherichia coli K-12 : B2113; ATPase	complement(2180871..2181980)	Shigella flexneri 2a str. 2457T	1078600
NP_837722.1	CDS	metG	NC_004741.1	2182112	2184145	D	methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase	2182112..2184145	Shigella flexneri 2a str. 2457T	1078601
NP_837723.1	CDS	yehL	NC_004741.1	2194722	2195876	D	residues 1 to 384 of 384 are 98.95 pct identical to residues 1 to 384 of 384 from Escherichia coli K-12 : B2119; hypothetical protein	2194722..2195876	Shigella flexneri 2a str. 2457T	1078608
NP_837724.1	CDS	yehM	NC_004741.1	2195887	2198166	D	residues 1 to 759 of 759 are 89.32 pct identical to residues 1 to 759 of 759 from Escherichia coli K-12 : B2120; hypothetical protein	2195887..2198166	Shigella flexneri 2a str. 2457T	1078609
NP_837725.1	CDS	yehP	NC_004741.1	2198159	2199295	D	residues 1 to 378 of 378 are 98.94 pct identical to residues 1 to 378 of 378 from Escherichia coli K-12 : B2121; hypothetical protein	2198159..2199295	Shigella flexneri 2a str. 2457T	1078611
NP_837726.1	CDS	yehQ	NC_004741.1	2199292	2201295	D	residues 1 to 615 of 667 are 87.64 pct identical to residues 9 to 622 of 622 from Escherichia coli K-12 : B2122; hypothetical protein	2199292..2201295	Shigella flexneri 2a str. 2457T	1078612
NP_837727.1	CDS	S2317	NC_004741.1	2201408	2201911	R	residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri]; IS1 orfB	complement(2201408..2201911)	Shigella flexneri 2a str. 2457T	1078613
NP_837728.1	CDS	S2318	NC_004741.1	2201830	2202105	R	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(2201830..2202105)	Shigella flexneri 2a str. 2457T	1078614
NP_837729.1	CDS	yehR	NC_004741.1	2202196	2202657	D	residues 1 to 153 of 153 are 89.54 pct identical to residues 5 to 157 of 157 from Escherichia coli K-12 : B2123; hypothetical protein	2202196..2202657	Shigella flexneri 2a str. 2457T	1078615
NP_837730.1	CDS	S2321	NC_004741.1	2202878	2203381	R	residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri]; IS1 orfB	complement(2202878..2203381)	Shigella flexneri 2a str. 2457T	1078617
NP_837731.1	CDS	S2322	NC_004741.1	2203300	2203575	R	residues 1 to 91 of 91 are 98.90 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(2203300..2203575)	Shigella flexneri 2a str. 2457T	1078618
NP_837732.1	CDS	yehT	NC_004741.1	2203991	2204710	R	unknown function; when overproduced it confers drug-resistance; two-component response-regulatory protein YehT	complement(2203991..2204710)	Shigella flexneri 2a str. 2457T	1078619
NP_837733.1	CDS	yehU	NC_004741.1	2204707	2206392	R	residues 1 to 561 of 561 are 95.90 pct identical to residues 1 to 561 of 561 from Escherichia coli K-12 : B2126; 2-component sensor protein	complement(2204707..2206392)	Shigella flexneri 2a str. 2457T	1078620
NP_837734.1	CDS	S2328	NC_004741.1	2208343	2208591	D	residues 1 to 82 of 82 are 96.34 pct identical to residues 1 to 82 of 82 from GenPept : >gb|AAG57731.1|AE005491_11 (AE005491) Z3916 gene product [Escherichia coli O157:H7 EDL933]; DNA-damage-inducible protein	2208343..2208591	Shigella flexneri 2a str. 2457T	1078621
NP_837735.1	CDS	S2329	NC_004741.1	2208707	2208976	R	residues 1 to 77 of 89 are 92.20 pct identical to residues 1 to 77 of 82 from GenPept : >gb|AAG56015.1|AE005334_2 (AE005334) unknown protein encoded by prophage CP-933X [Escherichia coli O157:H7 EDL933]; hypothetical protein	complement(2208707..2208976)	Shigella flexneri 2a str. 2457T	1080928
NP_837736.1	CDS	S2331	NC_004741.1	2211660	2212205	R	residues 5 to 146 of 181 are 60.56 pct identical to residues 24 to 165 of 188 from GenPept : >emb|CAC83575.1| (AJ298298) hypothetical protein [Bacteriophage P27]; hypothetical protein	complement(2211660..2212205)	Shigella flexneri 2a str. 2457T	1078623
NP_837737.1	CDS	S2332	NC_004741.1	2212250	2213584	R	residues 1 to 435 of 444 are 39.22 pct identical to residues 35 to 488 of 490 from GenPept : >emb|CAC83574.1| (AJ298298)  tail fiber protein [Bacteriophage P27]; phage tail fiber protein	complement(2212250..2213584)	Shigella flexneri 2a str. 2457T	1078624
NP_837738.1	CDS	S2333	NC_004741.1	2213709	2214197	R	residues 9 to 162 of 162 are 75.97 pct identical to residues 29 to 182 of 182 from GenPept : >emb|CAC83573.1| (AJ298298)  tail fiber assembly protein [Bacteriophage P27]; phage tail fiber assembly protein	complement(2213709..2214197)	Shigella flexneri 2a str. 2457T	1078625
NP_837739.1	CDS	S2334	NC_004741.1	2214257	2214367	R	residues 3 to 36 of 36 are 76.47 pct identical to residues 525 to 558 of 558 from GenPept : >dbj|BAA00552.1| (D00660) Bcv gene product [Shigella boydii]; phage tail fiber protein	complement(2214257..2214367)	Shigella flexneri 2a str. 2457T	1078626
NP_837740.1	CDS	S2335	NC_004741.1	2214712	2214987	D	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	2214712..2214987	Shigella flexneri 2a str. 2457T	1078627
NP_837741.1	CDS	S2336	NC_004741.1	2214906	2215409	D	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri]; IS1 B	2214906..2215409	Shigella flexneri 2a str. 2457T	1078628
NP_837742.1	CDS	S2337	NC_004741.1	2216108	2216434	D	residues 1 to 108 of 108 are 89.81 pct identical to residues 1 to 108 of 108 from GenPept : >gb|AAL72412.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS629 orfA	2216108..2216434	Shigella flexneri 2a str. 2457T	1078629
NP_837743.1	CDS	S2338	NC_004741.1	2216670	2217317	D	residues 1 to 215 of 215 are 98.13 pct identical to residues 8 to 222 of 222 from GenPept : >gb|AAL72361.1| (AF386526) transposase [Shigella flexneri 2a]; partial; IS629 orfB	2216670..2217317	Shigella flexneri 2a str. 2457T	1078630
NP_837744.1	CDS	S2340	NC_004741.1	2217368	2217682	R	no significant similarities; hypothetical protein	complement(2217368..2217682)	Shigella flexneri 2a str. 2457T	1078632
NP_837745.1	CDS	S2341	NC_004741.1	2217875	2217982	D	residues 1 to 35 of 35 are 88.57 pct identical to residues 1 to 35 of 35 from GenPept : >gb|AAL21065.1| (AE008796)  inner membrane protein [Salmonella typhimurium LT2]; hypothetical protein	2217875..2217982	Shigella flexneri 2a str. 2457T	1078633
NP_837746.1	CDS	yehW	NC_004741.1	2217963	2218694	R	residues 1 to 243 of 243 are 88.47 pct identical to residues 1 to 243 of 243 from Escherichia coli K-12 : B2128; transport system permease	complement(2217963..2218694)	Shigella flexneri 2a str. 2457T	1078634
NP_837747.1	CDS	yehX	NC_004741.1	2218699	2219625	R	residues 1 to 308 of 308 are 94.48 pct identical to residues 1 to 308 of 308 from Escherichia coli K-12 : B2129; ATP-binding component of a transport system	complement(2218699..2219625)	Shigella flexneri 2a str. 2457T	1078636
NP_837748.1	CDS	yehY	NC_004741.1	2219618	2220775	R	residues 1 to 385 of 385 are 77.66 pct identical to residues 1 to 385 of 385 from Escherichia coli K-12 : B2130; transport system permease	complement(2219618..2220775)	Shigella flexneri 2a str. 2457T	1078637
NP_837749.1	CDS	yehZ	NC_004741.1	2220782	2221699	R	residues 1 to 305 of 305 are 97.70 pct identical to residues 1 to 305 of 305 from Escherichia coli K-12 : B2131; transport system permease	complement(2220782..2221699)	Shigella flexneri 2a str. 2457T	1078214
NP_837750.1	CDS	bglX	NC_004741.1	2221951	2224248	R	residues 1 to 765 of 765 are 99.21 pct identical to residues 1 to 765 of 765 from Escherichia coli K-12 : B2132; periplasmic; beta-D-glucoside glucohydrolase	complement(2221951..2224248)	Shigella flexneri 2a str. 2457T	1078639
NP_837751.1	CDS	dld	NC_004741.1	2224444	2226159	D	component of the membrane-bound D-lactate oxidase, FAD-binding, NADH independent; D-lactate dehydrogenase	2224444..2226159	Shigella flexneri 2a str. 2457T	1080942
NP_837752.2	CDS	pbpG	NC_004741.1	2226197	2227138	R	specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi; Penicillin-binding protein 7; D-alanyl-D-alanine endopeptidase	complement(2226197..2227138)	Shigella flexneri 2a str. 2457T	1078640
NP_837753.1	CDS	yohC	NC_004741.1	2227303	2227890	R	residues 1 to 195 of 195 are 92.30 pct identical to residues 9 to 203 of 203 from Escherichia coli K-12 : B2135; hypothetical protein	complement(2227303..2227890)	Shigella flexneri 2a str. 2457T	1078641
NP_837754.1	CDS	yohD	NC_004741.1	2228024	2228638	D	residues 1 to 204 of 204 are 84.31 pct identical to residues 1 to 204 of 204 from Escherichia coli K-12 : B2136; hypothetical protein	2228024..2228638	Shigella flexneri 2a str. 2457T	1078642
NP_837755.1	CDS	yohI	NC_004741.1	2231683	2232630	R	residues 1 to 315 of 315 are 99.36 pct identical to residues 1 to 315 of 315 from Escherichia coli K-12 : B2140; tRNA-dihydrouridine synthase C	complement(2231683..2232630)	Shigella flexneri 2a str. 2457T	1076447
NP_837756.1	CDS	yohJ	NC_004741.1	2232869	2233267	D	residues 1 to 132 of 132 are 81.81 pct identical to residues 1 to 132 of 132 from Escherichia coli K-12 : B2141; hypothetical protein	2232869..2233267	Shigella flexneri 2a str. 2457T	1078646
NP_837757.1	CDS	yohK	NC_004741.1	2233264	2233959	D	residues 1 to 231 of 231 are 93.50 pct identical to residues 1 to 231 of 231 from Escherichia coli K-12 : B2142; hypothetical protein	2233264..2233959	Shigella flexneri 2a str. 2457T	1078647
NP_837758.1	CDS	cdd	NC_004741.1	2234089	2234973	D	Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis; cytidine deaminase	2234089..2234973	Shigella flexneri 2a str. 2457T	1078648
NP_837759.1	CDS	sanA	NC_004741.1	2235123	2235842	D	residues 1 to 239 of 239 are 92.46 pct identical to residues 1 to 239 of 239 from Escherichia coli K-12 : B2144; hypothetical protein	2235123..2235842	Shigella flexneri 2a str. 2457T	1078650
NP_837760.1	CDS	S2359	NC_004741.1	2235845	2236084	D	residues 1 to 79 of 79 are 86.07 pct identical to residues 1 to 79 of 79 from Escherichia coli K-12 : B2145; hypothetical protein	2235845..2236084	Shigella flexneri 2a str. 2457T	1078651
NP_837761.1	CDS	S2360	NC_004741.1	2236278	2237516	D	function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain; oxidoreductase	2236278..2237516	Shigella flexneri 2a str. 2457T	1076429
NP_837762.1	CDS	mglC	NC_004741.1	2238759	2239769	R	ABC transporter; functions in galactose transport; part of MglA2C2B transporter complex; beta-methylgalactoside transporter inner membrane component	complement(2238759..2239769)	Shigella flexneri 2a str. 2457T	1078653
NP_837763.1	CDS	mglA	NC_004741.1	2239785	2241305	R	with MglBC transports galactose or methyl galactoside into the cell; contains 2 ATP binding domains; galactose/methyl galaxtoside transporter ATP-binding protein	complement(2239785..2241305)	Shigella flexneri 2a str. 2457T	1078654
NP_837764.1	CDS	mglB	NC_004741.1	2241366	2242364	R	residues 1 to 332 of 332 are 95.48 pct identical to residues 1 to 332 of 332 from Escherichia coli K-12 : B2150; galactose-binding transport protein; receptor for galactose taxis	complement(2241366..2242364)	Shigella flexneri 2a str. 2457T	1078655
NP_837765.1	CDS	galS	NC_004741.1	2242644	2243684	R	negative regulator of the mglBAC operon for galactose utilization; DNA-binding transcriptional regulator GalS	complement(2242644..2243684)	Shigella flexneri 2a str. 2457T	1078657
NP_837766.1	CDS	yeiB	NC_004741.1	2243826	2244902	R	residues 1 to 358 of 358 are 79.74 pct identical to residues 1 to 385 of 385 from Escherichia coli K-12 : B2152; hypothetical protein	complement(2243826..2244902)	Shigella flexneri 2a str. 2457T	1078658
NP_837767.1	CDS	folE	NC_004741.1	2244919	2245587	R	involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I	complement(2244919..2245587)	Shigella flexneri 2a str. 2457T	1078659
NP_837768.1	CDS	lysP	NC_004741.1	2248995	2250464	R	residues 1 to 489 of 489 are 96.93 pct identical to residues 1 to 489 of 489 from Escherichia coli K-12 : B2156; lysine transporter	complement(2248995..2250464)	Shigella flexneri 2a str. 2457T	1077856
NP_837769.1	CDS	yeiE	NC_004741.1	2250670	2251551	R	residues 1 to 293 of 293 are 93.85 pct identical to residues 1 to 293 of 293 from Escherichia coli K-12 : B2157; DNA-binding transcriptional regulator	complement(2250670..2251551)	Shigella flexneri 2a str. 2457T	1078664
NP_837770.1	CDS	yeiH	NC_004741.1	2251650	2252699	D	residues 1 to 349 of 349 are 84.81 pct identical to residues 1 to 349 of 349 from Escherichia coli K-12 : B2158; hypothetical protein	2251650..2252699	Shigella flexneri 2a str. 2457T	1078665
NP_837771.1	CDS	nfo	NC_004741.1	2252773	2253630	D	Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues; endonuclease IV	2252773..2253630	Shigella flexneri 2a str. 2457T	1078666
NP_837772.1	CDS	yeiI	NC_004741.1	2253633	2254721	D	residues 1 to 362 of 362 are 97.79 pct identical to residues 1 to 362 of 362 from Escherichia coli K-12 : B2160; hypothetical protein	2253633..2254721	Shigella flexneri 2a str. 2457T	1078668
NP_837773.1	CDS	yeiJ	NC_004741.1	2254777	2256027	R	residues 1 to 416 of 416 are 95.67 pct identical to residues 1 to 416 of 416 from Escherichia coli K-12 : B2161; transport system permease	complement(2254777..2256027)	Shigella flexneri 2a str. 2457T	1078669
NP_837774.1	CDS	rihB	NC_004741.1	2256127	2257068	R	Hydrolyzes cytidine or uridine to ribose and cytosine or uracil, respectively; ribonucleoside hydrolase 2	complement(2256127..2257068)	Shigella flexneri 2a str. 2457T	1078670
NP_837775.1	CDS	yeiL	NC_004741.1	2257238	2257816	D	activator of nucleoside metabolism; DNA-binding transcriptional activator YeiL	2257238..2257816	Shigella flexneri 2a str. 2457T	1078671
NP_837776.1	CDS	yeiM	NC_004741.1	2257964	2259214	R	residues 1 to 416 of 416 are 93.99 pct identical to residues 1 to 416 of 416 from Escherichia coli K-12 : B2164; transport system permease	complement(2257964..2259214)	Shigella flexneri 2a str. 2457T	1078674
NP_837777.1	CDS	yeiN	NC_004741.1	2259308	2260246	R	residues 1 to 312 of 312 are 97.75 pct identical to residues 1 to 312 of 312 from Escherichia coli K-12 : B2165; hypothetical protein	complement(2259308..2260246)	Shigella flexneri 2a str. 2457T	1079023
NP_837778.1	CDS	yeiC	NC_004741.1	2260234	2261175	R	residues 1 to 313 of 313 are 98.72 pct identical to residues 1 to 313 of 313 from Escherichia coli K-12 : B2166; hypothetical protein	complement(2260234..2261175)	Shigella flexneri 2a str. 2457T	1078675
NP_837779.1	CDS	fruA	NC_004741.1	2261599	2263290	R	phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; fructose-specific PTS system IIBC component	complement(2261599..2263290)	Shigella flexneri 2a str. 2457T	1078677
NP_837780.1	CDS	fruK	NC_004741.1	2263307	2264245	R	converts fructose-1-phosphate and ATP to fructose-1,6-bisphosphate and ADP; highly specific for fructose-1-phopshate; similar to PfkB; forms homodimers; 1-phosphofructokinase	complement(2263307..2264245)	Shigella flexneri 2a str. 2457T	1078679
NP_837781.1	CDS	fruB	NC_004741.1	2264245	2265375	R	phosphoenolpyruvate (PEP)-dependent, sugar transporting phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIA is phosphorylated by phospho-HP which then transfers the phosphoryl group to the IIB componentr; bifunctional fructose-specific PTS IIA/HPr protein	complement(2264245..2265375)	Shigella flexneri 2a str. 2457T	1078203
NP_837782.1	CDS	yeiO	NC_004741.1	2265743	2266921	D	residues 1 to 388 of 392 are 94.32 pct identical to residues 1 to 388 of 393 from Escherichia coli K-12 : B2170; transport	2265743..2266921	Shigella flexneri 2a str. 2457T	1078680
NP_837783.1	CDS	S2385	NC_004741.1	2266915	2267418	R	residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri]; IS1 orfB	complement(2266915..2267418)	Shigella flexneri 2a str. 2457T	1079469
NP_837784.1	CDS	S2386	NC_004741.1	2267337	2267612	R	residues 1 to 91 of 91 are 98.90 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(2267337..2267612)	Shigella flexneri 2a str. 2457T	1078681
NP_837785.2	CDS	yeiP	NC_004741.1	2268106	2268678	D	Stimulates the peptidyltransferase activity of the 70S ribosome and enhances dipeptide synthesis with N-formylmethionyl-tRNA and puromycin in vitro, suggesting its involvement in the formation of the first peptide bond of a protein; elongation factor P	2268106..2268678	Shigella flexneri 2a str. 2457T	1079297
NP_837786.1	CDS	yeiQ	NC_004741.1	2268901	2270367	D	residues 1 to 488 of 488 are 97.95 pct identical to residues 1 to 488 of 488 from Escherichia coli K-12 : B2172; oxidoreductase	2268901..2270367	Shigella flexneri 2a str. 2457T	1078243
NP_837787.1	CDS	yeiR	NC_004741.1	2270485	2271471	D	residues 1 to 328 of 328 are 96.03 pct identical to residues 1 to 328 of 328 from Escherichia coli K-12 : B2173; hypothetical protein	2270485..2271471	Shigella flexneri 2a str. 2457T	1078683
NP_837788.1	CDS	S2390	NC_004741.1	2271510	2272223	D	residues 1 to 237 of 237 are 98.73 pct identical to residues 13 to 249 of 249 from Escherichia coli K-12 : B2174; hypothetical protein	2271510..2272223	Shigella flexneri 2a str. 2457T	1076536
NP_837789.1	CDS	spr	NC_004741.1	2272635	2273201	D	by similarity, Spr seems to have peptidase activity; involved in thermoresistance; outer membrane lipoprotein	2272635..2273201	Shigella flexneri 2a str. 2457T	1078684
NP_837790.1	CDS	rtn	NC_004741.1	2273382	2274938	D	residues 1 to 518 of 518 are 99.03 pct identical to residues 1 to 518 of 518 from Escherichia coli K-12 : B2176; hypothetical protein	2273382..2274938	Shigella flexneri 2a str. 2457T	1078479
NP_837791.1	CDS	yejA	NC_004741.1	2275020	2276834	D	residues 1 to 604 of 604 are 98.17 pct identical to residues 3 to 606 of 606 from Escherichia coli K-12 : B2177; hypothetical protein	2275020..2276834	Shigella flexneri 2a str. 2457T	1078685
NP_837792.1	CDS	yejB	NC_004741.1	2276835	2277929	D	residues 1 to 364 of 364 are 95.32 pct identical to residues 1 to 364 of 364 from Escherichia coli K-12 : B2178; transport system permease	2276835..2277929	Shigella flexneri 2a str. 2457T	1079658
NP_837793.1	CDS	yejE	NC_004741.1	2277929	2278954	D	residues 1 to 341 of 341 are 93.84 pct identical to residues 1 to 341 of 341 from Escherichia coli K-12 : B2179; transport system permease	2277929..2278954	Shigella flexneri 2a str. 2457T	1078687
NP_837794.1	CDS	yejF	NC_004741.1	2278956	2280545	D	residues 1 to 529 of 529 are 98.86 pct identical to residues 1 to 529 of 529 from Escherichia coli K-12 : B2180; ATP-binding component of a transport system	2278956..2280545	Shigella flexneri 2a str. 2457T	1078686
NP_837795.1	CDS	yejG	NC_004741.1	2280549	2280893	R	residues 1 to 114 of 114 are 100.00 pct identical to residues 1 to 114 of 114 from Escherichia coli K-12 : B2181; hypothetical protein	complement(2280549..2280893)	Shigella flexneri 2a str. 2457T	1078213
NP_837796.1	CDS	bcr	NC_004741.1	2281226	2282416	R	Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance; bicyclomycin/multidrug efflux system	complement(2281226..2282416)	Shigella flexneri 2a str. 2457T	1078690
NP_837797.1	CDS	rsuA	NC_004741.1	2282444	2283139	R	catalyzes the synthesis pseudouridine from uracil-516 in 16S ribosomal RNA; 16S rRNA pseudouridylate synthase A	complement(2282444..2283139)	Shigella flexneri 2a str. 2457T	1078689
NP_837798.1	CDS	yejH	NC_004741.1	2283289	2285049	D	residues 1 to 586 of 586 are 96.58 pct identical to residues 1 to 586 of 586 from Escherichia coli K-12 : B2184; ATP-dependent helicase	2283289..2285049	Shigella flexneri 2a str. 2457T	1078688
NP_837799.1	CDS	rplY	NC_004741.1	2285174	2285458	D	the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25	2285174..2285458	Shigella flexneri 2a str. 2457T	1078692
NP_837800.1	CDS	yejK	NC_004741.1	2285597	2286604	R	residues 1 to 335 of 335 are 92.83 pct identical to residues 1 to 335 of 335 from Escherichia coli K-12 : B2186; nucleoid-associated protein NdpA	complement(2285597..2286604)	Shigella flexneri 2a str. 2457T	1078691
NP_837801.1	CDS	yejL	NC_004741.1	2286786	2287013	D	residues 1 to 75 of 75 are 97.33 pct identical to residues 1 to 75 of 75 from Escherichia coli K-12 : B2187; hypothetical protein	2286786..2287013	Shigella flexneri 2a str. 2457T	1078693
NP_837802.1	CDS	yejM	NC_004741.1	2287033	2288793	D	residues 1 to 586 of 586 are 93.85 pct identical to residues 1 to 586 of 586 from Escherichia coli K-12 : B2188; sulfatase	2287033..2288793	Shigella flexneri 2a str. 2457T	1078695
NP_837803.1	CDS	yejO	NC_004741.1	2289047	2291557	R	residues 1 to 836 of 836 are 95.09 pct identical to residues 1 to 836 of 836 from Escherichia coli K-12 : B2190; ATP-binding component of a transport system	complement(2289047..2291557)	Shigella flexneri 2a str. 2457T	1078694
NP_837804.1	CDS	narP	NC_004741.1	2291958	2292605	D	nitrate/nitrite response regulator NarP; NarP is phosphorylated by NarX and NarQ and can activate fdnG and nitrite or nitrate reductase systems; represses expression of other anaerobic genes; transcriptional regulator NarP	2291958..2292605	Shigella flexneri 2a str. 2457T	1078698
NP_837805.1	CDS	ccmH	NC_004741.1	2292816	2293868	R	residues 1 to 350 of 350 are 95.42 pct identical to residues 1 to 350 of 350 from Escherichia coli K-12 : B2194; subunit of heme lyase	complement(2292816..2293868)	Shigella flexneri 2a str. 2457T	1078699
NP_837806.1	CDS	dsbE	NC_004741.1	2293865	2294422	R	residues 1 to 185 of 185 are 79.45 pct identical to residues 1 to 185 of 185 from Escherichia coli K-12 : B2195; disulfide oxidoreductase	complement(2293865..2294422)	Shigella flexneri 2a str. 2457T	1078697
NP_837807.1	CDS	ccmF	NC_004741.1	2294419	2296362	R	residues 1 to 647 of 647 are 90.41 pct identical to residues 1 to 647 of 647 from Escherichia coli K-12 : B2196; cytochrome c-type biogenesis protein	complement(2294419..2296362)	Shigella flexneri 2a str. 2457T	1078702
NP_837808.1	CDS	ccmE	NC_004741.1	2296359	2296838	R	CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane; cytochrome c-type biogenesis protein CcmE	complement(2296359..2296838)	Shigella flexneri 2a str. 2457T	1078701
NP_837809.1	CDS	ccmD	NC_004741.1	2296835	2297044	R	residues 1 to 50 of 69 are 63.99 pct identical to residues 1 to 50 of 69 from Escherichia coli K-12 : B2198; heme exporter protein C	complement(2296835..2297044)	Shigella flexneri 2a str. 2457T	1078700
NP_837810.1	CDS	ccmC	NC_004741.1	2297041	2297778	R	residues 1 to 245 of 245 are 100.00 pct identical to residues 1 to 245 of 245 from Escherichia coli K-12 : B2199; heme exporter protein C	complement(2297041..2297778)	Shigella flexneri 2a str. 2457T	1078703
NP_837811.1	CDS	ccmB	NC_004741.1	2297820	2298482	R	residues 1 to 220 of 220 are 65.45 pct identical to residues 1 to 220 of 220 from Escherichia coli K-12 : B2200; heme exporter protein B, cytochrome c-type biogenesis protein	complement(2297820..2298482)	Shigella flexneri 2a str. 2457T	1078704
NP_837812.1	CDS	ccmA	NC_004741.1	2298479	2299102	R	ATP-binding protein; required for proper cytochrome c maturation; cytochrome c biogenesis protein CcmA	complement(2298479..2299102)	Shigella flexneri 2a str. 2457T	1078706
NP_837813.1	CDS	napC	NC_004741.1	2299115	2299717	R	with NapABDFGH functions as a nitrate reductase; NapC functions as an electron shuttle between NapAB and NapGH or quinone; cytochrome c-type protein NapC	complement(2299115..2299717)	Shigella flexneri 2a str. 2457T	1078708
NP_837814.1	CDS	napB	NC_004741.1	2299727	2300176	R	small subunit of periplasmic nitrate reductase; receives electrons from the membrane-bound NapC and passes them to NapA; citrate reductase cytochrome c-type subunit	complement(2299727..2300176)	Shigella flexneri 2a str. 2457T	1078707
NP_837815.1	CDS	napH	NC_004741.1	2300173	2301036	R	part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA; quinol dehydrogenase membrane component	complement(2300173..2301036)	Shigella flexneri 2a str. 2457T	1078705
NP_837816.1	CDS	napG	NC_004741.1	2301023	2301718	R	part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA; secreted by twin arginine translocation pathway; quinol dehydrogenase periplasmic component	complement(2301023..2301718)	Shigella flexneri 2a str. 2457T	1078711
NP_837817.1	CDS	napA	NC_004741.1	2301725	2304211	R	periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC; nitrate reductase catalytic subunit	complement(2301725..2304211)	Shigella flexneri 2a str. 2457T	1078710
NP_837818.1	CDS	napD	NC_004741.1	2304208	2304471	R	residues 1 to 87 of 87 are 100.00 pct identical to residues 1 to 87 of 87 from Escherichia coli K-12 : B2207; assembly protein for periplasmic nitrate reductase	complement(2304208..2304471)	Shigella flexneri 2a str. 2457T	1078709
NP_837819.1	CDS	napF	NC_004741.1	2304461	2304955	R	Predicted role in electron transfer to the periplasmic nitrate reductase NapA.; ferredoxin-type protein	complement(2304461..2304955)	Shigella flexneri 2a str. 2457T	1078713
NP_837820.1	CDS	eco	NC_004741.1	2305363	2305851	D	residues 1 to 162 of 162 are 90.12 pct identical to residues 1 to 162 of 162 from Escherichia coli K-12 : B2209; ecotin	2305363..2305851	Shigella flexneri 2a str. 2457T	1078714
NP_837821.1	CDS	yojI	NC_004741.1	2307815	2309458	R	efflux pump for the antibacterial peptide microcin J25; multidrug transporter membrane component/ATP-binding component	complement(2307815..2309458)	Shigella flexneri 2a str. 2457T	1078718
NP_837822.1	CDS	alkB	NC_004741.1	2309534	2310184	R	residues 1 to 216 of 216 are 98.61 pct identical to residues 1 to 216 of 216 from Escherichia coli K-12 : B2212; alkylated DNA repair protein	complement(2309534..2310184)	Shigella flexneri 2a str. 2457T	1078717
NP_837823.1	CDS	ada	NC_004741.1	2310184	2311248	R	residues 1 to 354 of 354 are 92.37 pct identical to residues 1 to 354 of 354 from Escherichia coli K-12 : B2213; O6-methylguanine-DNA methyltransferase; transcription activator/repressor	complement(2310184..2311248)	Shigella flexneri 2a str. 2457T	1078716
NP_837824.1	CDS	yojL	NC_004741.1	2311322	2312377	R	catalyzes the conversion of aminoimidazole ribotide to the 4-amino-5-hydroxymethyl-2-methyl pyrimidine moiety of thiamine; involved in the maintenance and/or assembly of sulfur clusters; periplasmic lipoporotein anchored to the inner membrane; part of the thiamine pyrophosphate biosynthesis pathway; thiamine biosynthesis lipoprotein ApbE	complement(2311322..2312377)	Shigella flexneri 2a str. 2457T	1078715
NP_837825.1	CDS	ompC	NC_004741.1	2312489	2313610	R	allows for ions and hydrophilic solutes to cross the outer membrane; outer membrane porin protein C	complement(2312489..2313610)	Shigella flexneri 2a str. 2457T	1078720
NP_837826.1	CDS	yojN	NC_004741.1	2314348	2317020	D	residues 1 to 890 of 890 are 92.47 pct identical to residues 1 to 890 of 890 from Escherichia coli K-12 : B2216; phosphotransfer intermediate protein in two-component regulatory system with RcsBC	2314348..2317020	Shigella flexneri 2a str. 2457T	1078722
NP_837827.1	CDS	rcsB	NC_004741.1	2317037	2317687	D	two-component response regulator RscB regulates the genes involved in capsule biosynthesis and cell division; probably phosphorylated by RcsC or RcsF; transcriptional regulator RcsB	2317037..2317687	Shigella flexneri 2a str. 2457T	1078723
NP_837828.1	CDS	rcsC	NC_004741.1	2317887	2320736	R	residues 17 to 949 of 949 are 94.31 pct identical to residues 1 to 933 of 933 from Escherichia coli K-12 : B2218; hybrid sensory kinase in two-component regulatory system with RcsB and YojN	complement(2317887..2320736)	Shigella flexneri 2a str. 2457T	1078721
NP_837829.1	CDS	S2434	NC_004741.1	2321011	2321787	R	residues 1 to 258 of 258 are 94.18 pct identical to residues 1 to 258 of 258 from Escherichia coli K-12 : B2225; hypothetical protein	complement(2321011..2321787)	Shigella flexneri 2a str. 2457T	1078726
NP_837830.1	CDS	S2435	NC_004741.1	2321792	2323441	R	residues 1 to 549 of 549 are 97.08 pct identical to residues 1 to 549 of 549 from Escherichia coli K-12 : B2226; hypothetical protein	complement(2321792..2323441)	Shigella flexneri 2a str. 2457T	1078725
NP_837831.1	CDS	S2436	NC_004741.1	2323442	2323957	R	residues 12 to 171 of 171 are 99.37 pct identical to residues 2 to 161 of 161 from Escherichia coli K-12 : B2227; hypothetical protein	complement(2323442..2323957)	Shigella flexneri 2a str. 2457T	1078724
NP_837832.1	CDS	S2438	NC_004741.1	2325716	2326342	R	residues 1 to 208 of 208 are 100.00 pct identical to residues 72 to 279 of 279 from GenPept : >gb|AAL72449.1| (AF386526) InsB [Shigella flexneri 2a]; partial; IS911 orfB	complement(2325716..2326342)	Shigella flexneri 2a str. 2457T	1078728
NP_837833.1	CDS	S2440	NC_004741.1	2326582	2326884	R	residues 1 to 100 of 100 are 100.00 pct identical to residues 13 to 112 of 112 from GenPept : >gb|AAL72382.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS911 orfA	complement(2326582..2326884)	Shigella flexneri 2a str. 2457T	1078731
NP_837834.1	CDS	S2442	NC_004741.1	2329233	2329856	R	residues 1 to 207 of 207 are 98.55 pct identical to residues 10 to 216 of 216 from Escherichia coli K-12 : B2229; hypothetical protein	complement(2329233..2329856)	Shigella flexneri 2a str. 2457T	1078732
NP_837835.1	CDS	gyrA	NC_004741.1	2331690	2334317	R	negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A	complement(2331690..2334317)	Shigella flexneri 2a str. 2457T	1078730
NP_837836.1	CDS	ubiG	NC_004741.1	2334464	2335186	D	Involved in ubiquinone biosynthesis; 3-demethylubiquinone-9 3-methyltransferase	2334464..2335186	Shigella flexneri 2a str. 2457T	1078729
NP_837837.1	CDS	S2447	NC_004741.1	2338932	2339342	D	IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats; insertion sequence 2 OrfA protein	2338932..2339342	Shigella flexneri 2a str. 2457T	1078736
NP_837838.2	CDS	S2448	NC_004741.1	2339300	2340205	D	IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats; insertion element IS2 transposase InsD	2339300..2340205	Shigella flexneri 2a str. 2457T	1078738
NP_837839.1	CDS	nrdA	NC_004741.1	2341076	2343361	D	Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha	2341076..2343361	Shigella flexneri 2a str. 2457T	1078737
NP_837840.2	CDS	nrdB	NC_004741.1	2343595	2344725	D	B2 or R2 protein; type 1a enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdA; ribonucleotide-diphosphate reductase subunit beta	2343595..2344725	Shigella flexneri 2a str. 2457T	1078739
NP_837841.1	CDS	yfaE	NC_004741.1	2344725	2344979	D	plays a role in maintenance and possibly the biosynthesis of diferric-tyrosyl radical cofactor, essential for nucleotide reduction catalyzed by ribonucleotide reductases; 2Fe-2S ferredoxin	2344725..2344979	Shigella flexneri 2a str. 2457T	1078742
NP_837842.1	CDS	inaA	NC_004741.1	2345033	2345683	R	residues 1 to 216 of 216 are 98.61 pct identical to residues 1 to 216 of 216 from Escherichia coli K-12 : B2237; hypothetical protein	complement(2345033..2345683)	Shigella flexneri 2a str. 2457T	1078741
NP_837843.1	CDS	yfaH	NC_004741.1	2345898	2346104	D	residues 1 to 68 of 68 are 97.05 pct identical to residues 1 to 68 of 68 from Escherichia coli K-12 : B2238; hypothetical protein	2345898..2346104	Shigella flexneri 2a str. 2457T	1078740
NP_837844.1	CDS	glpQ	NC_004741.1	2346146	2347222	R	hydrolyzes deacylated phospholipids to glycerol 3-phosphate and the corresponding alcohols; periplasmic; glycerophosphodiester phosphodiesterase	complement(2346146..2347222)	Shigella flexneri 2a str. 2457T	1078746
NP_837845.1	CDS	glpT	NC_004741.1	2347227	2348585	R	catalyzes the uptake of glycerol-3-phosphate into the cell with the simultaneous export of inorganic phosphate from the cell; sn-glycerol-3-phosphate transporter	complement(2347227..2348585)	Shigella flexneri 2a str. 2457T	1080930
NP_837846.1	CDS	glpA	NC_004741.1	2348858	2350486	D	anaerobic, catalyzes the conversion of glycerol 3-phosphate to dihydroxyacetone using fumarate or nitrate as electron acceptor; sn-glycerol-3-phosphate dehydrogenase subunit A	2348858..2350486	Shigella flexneri 2a str. 2457T	1078747
NP_837847.1	CDS	glpB	NC_004741.1	2350476	2351735	D	sn-glycerol-3-phosphate dehydrogenase (anaerobic); catalyzes the formation of dihydroxyacetone from glycerol 3-phosphate; part of GlpABC complex; presumably this subunit is responsible for membrane interactions and contains iron-sulfur clusters; anaerobic glycerol-3-phosphate dehydrogenase subunit B	2350476..2351735	Shigella flexneri 2a str. 2457T	1078744
NP_837848.1	CDS	glpC	NC_004741.1	2351732	2352922	D	anaerobic; with GlpAB catalyzes the conversion of glycerol-3-phosphate to dihydroxyacetone phosphate; sn-glycerol-3-phosphate dehydrogenase subunit C	2351732..2352922	Shigella flexneri 2a str. 2457T	1078743
NP_837849.1	CDS	yfaD	NC_004741.1	2353115	2354065	D	residues 1 to 311 of 316 are 90.03 pct identical to residues 1 to 295 of 299 from Escherichia coli K-12 : B2244; hypothetical protein	2353115..2354065	Shigella flexneri 2a str. 2457T	1078751
NP_837850.1	CDS	S2460	NC_004741.1	2354106	2354576	R	residues 4 to 156 of 156 are 77.77 pct identical to residues 115 to 267 of 267 from Escherichia coli K-12 : B2245; hypothetical protein	complement(2354106..2354576)	Shigella flexneri 2a str. 2457T	1078750
NP_837851.1	CDS	S2461	NC_004741.1	2354631	2355833	R	residues 1 to 400 of 400 are 96.24 pct identical to residues 1 to 400 of 400 from Escherichia coli K-12 : B2249; competence damage-inducible protein A	complement(2354631..2355833)	Shigella flexneri 2a str. 2457T	1078748
NP_837852.1	CDS	S2462	NC_004741.1	2355920	2356462	R	residues 1 to 180 of 180 are 87.77 pct identical to residues 8 to 187 of 187 from Escherichia coli K-12 : B2250; hypothetical protein	complement(2355920..2356462)	Shigella flexneri 2a str. 2457T	1078754
NP_837853.1	CDS	yfaO	NC_004741.1	2356804	2357166	D	residues 1 to 120 of 120 are 80.00 pct identical to residues 22 to 141 of 141 from Escherichia coli K-12 : B2251; hypothetical protein	2356804..2357166	Shigella flexneri 2a str. 2457T	1078753
NP_837854.1	CDS	ais	NC_004741.1	2357205	2357783	R	residues 1 to 192 of 192 are 90.62 pct identical to residues 9 to 200 of 200 from Escherichia coli K-12 : B2252; protein induced by aluminum	complement(2357205..2357783)	Shigella flexneri 2a str. 2457T	1078752
NP_837855.2	CDS	S2465	NC_004741.1	2358115	2359254	D	catalyzes the conversion of UDP-4-keto-arabinose to UDP-4-amino-4-deoxy-L-arabinose; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase	2358115..2359254	Shigella flexneri 2a str. 2457T	1078758
NP_837856.1	CDS	S2466	NC_004741.1	2359258	2360226	D	catalyzes the transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate; undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase	2359258..2360226	Shigella flexneri 2a str. 2457T	1078757
NP_837857.1	CDS	ybfG	NC_004741.1	2360657	2362207	D	residues 1 to 516 of 516 are 98.83 pct identical to residues 145 to 660 of 660 from Escherichia coli K-12 : B2255; hypothetical protein	2360657..2362207	Shigella flexneri 2a str. 2457T	1078755
NP_837858.1	CDS	S2468	NC_004741.1	2362204	2363094	D	residues 1 to 296 of 296 are 95.27 pct identical to residues 1 to 296 of 296 from Escherichia coli K-12 : B2256; hypothetical protein	2362204..2363094	Shigella flexneri 2a str. 2457T	1078760
NP_837859.1	CDS	arnT	NC_004741.1	2363094	2364746	D	catalyzes the addition of 4-amino-4-deoxy-L-arabinose to lipid A; 4-amino-4-deoxy-L-arabinose transferase	2363094..2364746	Shigella flexneri 2a str. 2457T	1078763
NP_837860.1	CDS	S2567	NC_004741.1	2364743	2365078	D	residues 1 to 477 of 477 are 99.16 pct identical to residues 1 to 477 of 477 from GenPept : >gb|AAC33123.1| (AF084030) sucrose hydrolase [Escherichia coli]; sucrose-6 phosphate hydrolase	2364743..2365078	Shigella flexneri 2a str. 2457T	1078762
NP_837861.2	CDS	S2471	NC_004741.1	2365078	2365464	D	residues 1 to 222 of 222 are 86.03 pct identical to residues 1 to 222 of 222 from Escherichia coli K-12 : B2258; hypothetical protein	2365078..2365464	Shigella flexneri 2a str. 2457T	1078759
NP_837862.1	CDS	menE	NC_004741.1	2365835	2367190	R	residues 1 to 451 of 451 are 92.90 pct identical to residues 1 to 451 of 451 from Escherichia coli K-12 : B2260; O-succinylbenzoic acid--CoA ligase	complement(2365835..2367190)	Shigella flexneri 2a str. 2457T	1078765
NP_837863.1	CDS	menC	NC_004741.1	2367187	2368149	R	catalyzes the dehydration of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate; O-succinylbenzoate synthase	complement(2367187..2368149)	Shigella flexneri 2a str. 2457T	1078764
NP_837864.1	CDS	menB	NC_004741.1	2368149	2369006	R	catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA; naphthoate synthase	complement(2368149..2369006)	Shigella flexneri 2a str. 2457T	1078768
NP_837865.1	CDS	yfbB	NC_004741.1	2369021	2369779	R	catalyzes the hydrolysis of the thioester bond in palmitoyl-CoA; acyl-CoA thioester hydrolase YfbB	complement(2369021..2369779)	Shigella flexneri 2a str. 2457T	1078767
NP_837866.1	CDS	menD	NC_004741.1	2369776	2371446	R	SEPHCHC synthase; forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1- carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis; 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase	complement(2369776..2371446)	Shigella flexneri 2a str. 2457T	1078771
NP_837867.2	CDS	menF	NC_004741.1	2371535	2372830	R	synthesizes isochorismate acid from chorismate; menaquinone-specific isochorismate synthase	complement(2371535..2372830)	Shigella flexneri 2a str. 2457T	1076991
NP_837868.1	CDS	elaB	NC_004741.1	2372909	2373214	R	residues 1 to 84 of 101 are 77.38 pct identical to residues 1 to 84 of 101 from Escherichia coli K-12 : B2266; hypothetical protein	complement(2372909..2373214)	Shigella flexneri 2a str. 2457T	1078770
NP_837869.1	CDS	elaA	NC_004741.1	2373269	2373730	R	residues 1 to 153 of 153 are 100.00 pct identical to residues 1 to 153 of 153 from Escherichia coli K-12 : B2267; hypothetical protein	complement(2373269..2373730)	Shigella flexneri 2a str. 2457T	1078772
NP_837870.2	CDS	elaC	NC_004741.1	2373795	2374712	D	member of metallo-beta-lactamase family; the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase; in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not; associates with two zinc ions; ribonuclease Z	2373795..2374712	Shigella flexneri 2a str. 2457T	1078773
NP_837871.1	CDS	S2482	NC_004741.1	2375148	2375423	D	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	2375148..2375423	Shigella flexneri 2a str. 2457T	1078774
NP_837872.1	CDS	S2483	NC_004741.1	2375342	2375845	D	residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri]; IS1 orfB	2375342..2375845	Shigella flexneri 2a str. 2457T	1078735
NP_837873.2	CDS	nuoN	NC_004741.1	2377618	2379075	R	Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit N	complement(2377618..2379075)	Shigella flexneri 2a str. 2457T	1078775
NP_837874.1	CDS	nuoM	NC_004741.1	2379082	2380611	R	Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit M	complement(2379082..2380611)	Shigella flexneri 2a str. 2457T	1078777
NP_837875.1	CDS	nuoL	NC_004741.1	2380775	2382616	R	Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L	complement(2380775..2382616)	Shigella flexneri 2a str. 2457T	1078778
NP_837876.1	CDS	nuoK	NC_004741.1	2382613	2382915	R	Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit K	complement(2382613..2382915)	Shigella flexneri 2a str. 2457T	1078782
NP_837877.1	CDS	nuoJ	NC_004741.1	2382912	2383466	R	Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit J	complement(2382912..2383466)	Shigella flexneri 2a str. 2457T	1078784
NP_837878.1	CDS	nuoI	NC_004741.1	2383478	2384020	R	Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I	complement(2383478..2384020)	Shigella flexneri 2a str. 2457T	1078785
NP_837879.1	CDS	nuoH	NC_004741.1	2384035	2385012	R	Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H	complement(2384035..2385012)	Shigella flexneri 2a str. 2457T	1076667
NP_837880.1	CDS	nuoG	NC_004741.1	2385009	2387735	R	Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit G	complement(2385009..2387735)	Shigella flexneri 2a str. 2457T	1078783
NP_837881.1	CDS	nuoF	NC_004741.1	2387788	2389125	R	shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase; NADH dehydrogenase I subunit F	complement(2387788..2389125)	Shigella flexneri 2a str. 2457T	1078787
NP_837882.1	CDS	nuoE	NC_004741.1	2389122	2389622	R	Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit E	complement(2389122..2389622)	Shigella flexneri 2a str. 2457T	1078788
NP_837883.1	CDS	nuoC	NC_004741.1	2389625	2391427	R	NuoCD; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; subunits NuoCD, E, F, and G constitute the peripheral sector of the complex; in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms; bifunctional NADH:ubiquinone oxidoreductase subunit C/D	complement(2389625..2391427)	Shigella flexneri 2a str. 2457T	1076920
NP_837884.1	CDS	nuoB	NC_004741.1	2391521	2392183	R	The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B	complement(2391521..2392183)	Shigella flexneri 2a str. 2457T	1078089
NP_837885.1	CDS	nuoA	NC_004741.1	2392199	2392642	R	Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit A	complement(2392199..2392642)	Shigella flexneri 2a str. 2457T	1078789
NP_837886.1	CDS	lrhA	NC_004741.1	2393273	2394211	R	residues 1 to 312 of 312 are 91.98 pct identical to residues 1 to 312 of 312 from Escherichia coli K-12 : B2289; LysR family NADH dehydrogenase transcriptional regulator	complement(2393273..2394211)	Shigella flexneri 2a str. 2457T	1078790
NP_837887.1	CDS	S2501	NC_004741.1	2395130	2396347	D	broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; aminotransferase AlaT	2395130..2396347	Shigella flexneri 2a str. 2457T	1080077
NP_837888.1	CDS	S2502	NC_004741.1	2396431	2397030	D	residues 1 to 199 of 199 are 98.99 pct identical to residues 1 to 199 of 199 from Escherichia coli K-12 : B2291; hypothetical protein	2396431..2397030	Shigella flexneri 2a str. 2457T	1078786
NP_837889.1	CDS	yfbS	NC_004741.1	2397089	2398921	R	residues 1 to 610 of 610 are 90.49 pct identical to residues 1 to 610 of 610 from Escherichia coli K-12 : B2292; transporter	complement(2397089..2398921)	Shigella flexneri 2a str. 2457T	1076659
NP_837890.1	CDS	yfbT	NC_004741.1	2399008	2399658	R	residues 1 to 216 of 216 are 93.05 pct identical to residues 7 to 222 of 222 from Escherichia coli K-12 : B2293; phosphatase	complement(2399008..2399658)	Shigella flexneri 2a str. 2457T	1078791
NP_837891.1	CDS	S2505	NC_004741.1	2399669	2400163	R	residues 1 to 164 of 164 are 98.78 pct identical to residues 7 to 170 of 170 from Escherichia coli K-12 : B2294; hypothetical protein	complement(2399669..2400163)	Shigella flexneri 2a str. 2457T	1078793
NP_837892.1	CDS	S2506	NC_004741.1	2400246	2400701	R	residues 1 to 151 of 151 are 99.33 pct identical to residues 1 to 151 of 151 from Escherichia coli K-12 : B2295; hypothetical protein	complement(2400246..2400701)	Shigella flexneri 2a str. 2457T	1078794
NP_837893.1	CDS	ackA	NC_004741.1	2401039	2402241	D	AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase	2401039..2402241	Shigella flexneri 2a str. 2457T	1078795
NP_837894.1	CDS	pta	NC_004741.1	2402316	2404460	D	catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate; phosphate acetyltransferase	2402316..2404460	Shigella flexneri 2a str. 2457T	1078796
NP_837895.2	CDS	yfcC	NC_004741.1	2404650	2406170	D	residues 1 to 513 of 513 are 99.80 pct identical to residues 1 to 513 of 513 from Escherichia coli K-12 : B2298; hypothetical protein	2404650..2406170	Shigella flexneri 2a str. 2457T	1078797
NP_837896.1	CDS	S2510	NC_004741.1	2406203	2406745	R	residues 1 to 180 of 180 are 91.11 pct identical to residues 1 to 180 of 180 from Escherichia coli K-12 : B2299; regulator	complement(2406203..2406745)	Shigella flexneri 2a str. 2457T	1076638
NP_837897.1	CDS	yfcE	NC_004741.1	2406803	2407354	R	residues 1 to 183 of 183 are 97.81 pct identical to residues 2 to 184 of 184 from Escherichia coli K-12 : B2300; phosphodiesterase	complement(2406803..2407354)	Shigella flexneri 2a str. 2457T	1078792
NP_837898.1	CDS	yfcF	NC_004741.1	2407410	2408054	R	residues 1 to 214 of 214 are 99.53 pct identical to residues 1 to 214 of 214 from Escherichia coli K-12 : B2301; hypothetical protein	complement(2407410..2408054)	Shigella flexneri 2a str. 2457T	1078800
NP_837899.1	CDS	yfcG	NC_004741.1	2408190	2408837	D	residues 1 to 215 of 215 are 99.06 pct identical to residues 1 to 215 of 215 from Escherichia coli K-12 : B2302; glutathione S-transferase	2408190..2408837	Shigella flexneri 2a str. 2457T	1078801
NP_837900.1	CDS	folX	NC_004741.1	2408894	2409256	D	catalyzes the formation of dihydromonapterin triphosphate from dihydroneopterin triphosphate; D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase	2408894..2409256	Shigella flexneri 2a str. 2457T	1076649
NP_837901.1	CDS	S2515	NC_004741.1	2409277	2410170	D	residues 1 to 297 of 297 are 99.32 pct identical to residues 1 to 297 of 297 from Escherichia coli K-12 : B2304; sugar nucleotide epimerase	2409277..2410170	Shigella flexneri 2a str. 2457T	1078799
NP_837902.1	CDS	yfcI	NC_004741.1	2410218	2411108	R	residues 1 to 296 of 296 are 98.64 pct identical to residues 1 to 296 of 296 from Escherichia coli K-12 : B2305; hypothetical protein	complement(2410218..2411108)	Shigella flexneri 2a str. 2457T	1078802
NP_837903.1	CDS	hisP	NC_004741.1	2411305	2412078	R	residues 1 to 257 of 257 are 95.71 pct identical to residues 1 to 257 of 257 from Escherichia coli K-12 : B2306; histidine/lysine/arginine/ornithine transporter subunit	complement(2411305..2412078)	Shigella flexneri 2a str. 2457T	1078805
NP_837904.1	CDS	hisM	NC_004741.1	2412086	2412802	R	residues 1 to 238 of 238 are 87.81 pct identical to residues 1 to 238 of 238 from Escherichia coli K-12 : B2307; histidine transport, membrane protein M	complement(2412086..2412802)	Shigella flexneri 2a str. 2457T	1076645
NP_837905.1	CDS	hisQ	NC_004741.1	2412799	2413485	R	residues 1 to 228 of 228 are 89.47 pct identical to residues 1 to 228 of 228 from Escherichia coli K-12 : B2308; histidine transport system permease	complement(2412799..2413485)	Shigella flexneri 2a str. 2457T	1078804
NP_837906.1	CDS	hisJ	NC_004741.1	2413575	2414357	R	residues 1 to 260 of 260 are 91.92 pct identical to residues 1 to 260 of 260 from Escherichia coli K-12 : B2309; histidine-binding periplasmic protein of high-affinity histidine transport system	complement(2413575..2414357)	Shigella flexneri 2a str. 2457T	1078806
NP_837907.1	CDS	argT	NC_004741.1	2414578	2415360	R	residues 1 to 260 of 260 are 91.15 pct identical to residues 1 to 260 of 260 from Escherichia coli K-12 : B2310; lysine-, arginine-, ornithine-binding periplasmic protein	complement(2414578..2415360)	Shigella flexneri 2a str. 2457T	1078807
NP_837908.1	CDS	ubiX	NC_004741.1	2415626	2416195	R	catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase	complement(2415626..2416195)	Shigella flexneri 2a str. 2457T	1078672
NP_837909.1	CDS	purF	NC_004741.1	2416290	2417807	R	Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase	complement(2416290..2417807)	Shigella flexneri 2a str. 2457T	1078808
NP_837910.1	CDS	cvpA	NC_004741.1	2417844	2418332	R	membrane protein required for colicin V production; colicin V production protein	complement(2417844..2418332)	Shigella flexneri 2a str. 2457T	1076655
NP_837911.2	CDS	dedD	NC_004741.1	2418591	2419253	R	residues 1 to 211 of 211 are 67.77 pct identical to residues 1 to 211 of 211 from Escherichia coli K-12 : B2314; hypothetical protein	complement(2418591..2419253)	Shigella flexneri 2a str. 2457T	1078812
NP_837912.1	CDS	folC	NC_004741.1	2419243	2420511	R	residues 1 to 422 of 422 are 92.89 pct identical to residues 1 to 422 of 422 from Escherichia coli K-12 : B2315; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase	complement(2419243..2420511)	Shigella flexneri 2a str. 2457T	1078813
NP_837913.1	CDS	accD	NC_004741.1	2420581	2421495	R	catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta	complement(2420581..2421495)	Shigella flexneri 2a str. 2457T	1078815
NP_837914.1	CDS	dedA	NC_004741.1	2421651	2422310	R	residues 1 to 210 of 219 are 90.95 pct identical to residues 1 to 210 of 219 from Escherichia coli K-12 : B2317; hypothetical protein	complement(2421651..2422310)	Shigella flexneri 2a str. 2457T	1076642
NP_837915.1	CDS	truA	NC_004741.1	2422393	2423205	R	mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A	complement(2422393..2423205)	Shigella flexneri 2a str. 2457T	1078809
NP_837916.1	CDS	usg	NC_004741.1	2423205	2424218	R	residues 1 to 337 of 337 are 87.53 pct identical to residues 1 to 337 of 337 from Escherichia coli K-12 : B2319; semialdehyde dehydrogenase	complement(2423205..2424218)	Shigella flexneri 2a str. 2457T	1076658
NP_837917.1	CDS	pdxB	NC_004741.1	2424284	2425420	R	catalyzes the formation of 3-hydroxy-4-phospho-hydroxy-alpha-ketobutyrate from erythronate-4-phosphate; erythronate-4-phosphate dehydrogenase	complement(2424284..2425420)	Shigella flexneri 2a str. 2457T	1078816
NP_837918.1	CDS	flk	NC_004741.1	2425519	2426514	D	in Salmonella typhimurium Flk regulates flagellar biosynthesis by inhibition of the flagellar-associated type III secretion system; lowers secretion levels of the anti-sigma28 factor FlgM to the periplasm; inner membrane-anchored protein; flagella biosynthesis regulator	2425519..2426514	Shigella flexneri 2a str. 2457T	1078817
NP_837919.1	CDS	S2533	NC_004741.1	2426511	2427689	R	residues 1 to 392 of 392 are 83.16 pct identical to residues 1 to 392 of 392 from Escherichia coli K-12 : B2322; hypothetical protein	complement(2426511..2427689)	Shigella flexneri 2a str. 2457T	1076682
NP_837920.1	CDS	fabB	NC_004741.1	2427944	2429185	R	FabB, beta-Ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase	complement(2427944..2429185)	Shigella flexneri 2a str. 2457T	1078820
NP_837921.2	CDS	mnmC	NC_004741.1	2429344	2431350	D	catalyzes the formation of 5-methylaminomethyl-2-thiouridine in position 34 of the anticodon of tRNA molecules; 5-methylaminomethyl-2-thiouridine methyltransferase	2429344..2431350	Shigella flexneri 2a str. 2457T	1078821
NP_837922.1	CDS	S2536	NC_004741.1	2431471	2431749	R	residues 1 to 91 of 92 are 100.00 pct identical to residues 1 to 91 of 92 from Escherichia coli K-12 : B2325; hypothetical protein	complement(2431471..2431749)	Shigella flexneri 2a str. 2457T	1078819
NP_837923.1	CDS	S2537	NC_004741.1	2431783	2432331	R	residues 1 to 182 of 182 are 98.90 pct identical to residues 1 to 182 of 182 from Escherichia coli K-12 : B2326; transporting ATPase	complement(2431783..2432331)	Shigella flexneri 2a str. 2457T	1078823
NP_837924.1	CDS	yfcA	NC_004741.1	2432331	2433140	R	residues 1 to 269 of 269 are 95.53 pct identical to residues 1 to 269 of 269 from Escherichia coli K-12 : B2327; hypothetical protein	complement(2432331..2433140)	Shigella flexneri 2a str. 2457T	1078822
NP_837925.1	CDS	mepA	NC_004741.1	2433140	2433964	R	D-alanyl-D-alanine endopeptidase; functions in hydrolyzing cell wall peptidoglycan; similar to LAS metallopeptidases; forms a dimer in periplasm; penicillin-insensitive murein endopeptidase	complement(2433140..2433964)	Shigella flexneri 2a str. 2457T	1076664
NP_837926.1	CDS	aroC	NC_004741.1	2433968	2435053	R	catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase	complement(2433968..2435053)	Shigella flexneri 2a str. 2457T	1078824
NP_837927.1	CDS	yfcB	NC_004741.1	2435088	2436353	R	involved in methylation of ribosomal protein L3; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase	complement(2435088..2436353)	Shigella flexneri 2a str. 2457T	1078825
NP_837928.1	CDS	S2541	NC_004741.1	2436186	2436737	D	residues 1 to 183 of 183 are 100.00 pct identical to residues 1 to 183 of 183 from Escherichia coli K-12 : B2331; hypothetical protein	2436186..2436737	Shigella flexneri 2a str. 2457T	1078826
NP_837929.1	CDS	S2550	NC_004741.1	2442723	2443286	R	residues 1 to 187 of 187 are 83.95 pct identical to residues 1 to 187 of 187 from Escherichia coli K-12 : B2339; fimbrial-like protein	complement(2442723..2443286)	Shigella flexneri 2a str. 2457T	1078834
NP_837930.1	CDS	S2551	NC_004741.1	2443555	2444058	R	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri]; IS1 orfB	complement(2443555..2444058)	Shigella flexneri 2a str. 2457T	1078835
NP_837931.1	CDS	S2552	NC_004741.1	2443977	2444252	R	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(2443977..2444252)	Shigella flexneri 2a str. 2457T	1078836
NP_837932.1	CDS	S2553	NC_004741.1	2444747	2445232	R	residues 1 to 161 of 161 are 99.37 pct identical to residues 1 to 161 of 161 from Escherichia coli K-12 : B2340; phosphohistidine phosphatase	complement(2444747..2445232)	Shigella flexneri 2a str. 2457T	1078832
NP_837933.1	CDS	fadJ	NC_004741.1	2445435	2447579	R	multifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities: forms a heterotetramer with FadI; similar to FadA2B2 complex; involved in the anaerobic degradation of long and medium-chain fatty acids in the presence of nitrate; multifunctional fatty acid oxidation complex subunit alpha	complement(2445435..2447579)	Shigella flexneri 2a str. 2457T	1076648
NP_837934.1	CDS	fadI	NC_004741.1	2447579	2448889	R	FadI; fatty acid oxidation complex component beta; functions in a heterotetramer with FadJ; similar to FadA2B2 complex; functions in beta-oxidation of fatty acids during anaerobic growth; 3-ketoacyl-CoA thiolase	complement(2447579..2448889)	Shigella flexneri 2a str. 2457T	1078837
NP_837935.1	CDS	S2556	NC_004741.1	2449069	2449377	R	residues 1 to 102 of 102 are 86.27 pct identical to residues 1 to 102 of 102 from Escherichia coli K-12 : B2343; hypothetical protein	complement(2449069..2449377)	Shigella flexneri 2a str. 2457T	1078838
NP_837936.1	CDS	fadL	NC_004741.1	2449725	2451065	D	residues 1 to 446 of 446 are 99.55 pct identical to residues 3 to 448 of 448 from Escherichia coli K-12 : B2344; sensitivity to phage t2; long-chain fatty acid outer membrane transporter	2449725..2451065	Shigella flexneri 2a str. 2457T	1078839
NP_837937.1	CDS	S2558	NC_004741.1	2451431	2452489	D	residues 1 to 352 of 352 are 88.92 pct identical to residues 1 to 352 of 352 from Escherichia coli K-12 : B2345; hypothetical protein	2451431..2452489	Shigella flexneri 2a str. 2457T	1078840
NP_837938.1	CDS	vacJ	NC_004741.1	2452671	2453426	R	residues 1 to 251 of 251 are 99.20 pct identical to residues 1 to 251 of 251 from Escherichia coli K-12 : B2346; lipoprotein precursor	complement(2452671..2453426)	Shigella flexneri 2a str. 2457T	1078841
NP_837939.1	CDS	yfdC	NC_004741.1	2453831	2454652	D	residues 1 to 273 of 273 are 87.17 pct identical to residues 38 to 310 of 310 from Escherichia coli K-12 : B2347; transporter	2453831..2454652	Shigella flexneri 2a str. 2457T	1078842
NP_837940.1	CDS	S2565	NC_004741.1	2456297	2456599	R	residues 1 to 100 of 100 are 100.00 pct identical to residues 13 to 112 of 112 from GenPept : >gb|AAL72382.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS911 orfA	complement(2456297..2456599)	Shigella flexneri 2a str. 2457T	1078844
NP_837941.1	CDS	S2566	NC_004741.1	2456580	2457185	R	residues 1 to 191 of 201 are 90.76 pct identical to residues 7 to 201 of 439 from GenPept : >gb|AAK18553.1|AF348706_242 (AF348706) IS4 orf [Shigella flexneri]; partial; IS4 orf	complement(2456580..2457185)	Shigella flexneri 2a str. 2457T	1078845
NP_837942.1	CDS	S2470	NC_004741.1	2457501	2458934	D	residues 1 to 111 of 111 are 79.27 pct identical to residues 1 to 111 of 111 from GenPept : >gb|AAG57389.1|AE005458_6 (AE005458) Z3516 gene product [Escherichia coli O157:H7 EDL933]; hypothetical protein	2457501..2458934	Shigella flexneri 2a str. 2457T	1078846
NP_837943.1	CDS	S2568	NC_004741.1	2458942	2460000	R	residues 22 to 352 of 352 are 96.37 pct identical to residues 1 to 331 of 331 from GenPept : >emb|CAA57220.1| (X81461) sucrose specific repressor [Escherichia coli]; sucrose specific repressor	complement(2458942..2460000)	Shigella flexneri 2a str. 2457T	1078338
NP_837944.1	CDS	dsdA	NC_004741.1	2460404	2461732	D	catalyzes the formation of pyruvate from serine; D-serine dehydratase	2460404..2461732	Shigella flexneri 2a str. 2457T	1078849
NP_837945.1	CDS	emrY	NC_004741.1	2461840	2463378	R	residues 1 to 512 of 512 are 89.25 pct identical to residues 1 to 512 of 512 from Escherichia coli K-12 : B2367; multidrug resistance protein Y	complement(2461840..2463378)	Shigella flexneri 2a str. 2457T	1078852
NP_837946.1	CDS	emrK	NC_004741.1	2463378	2464541	R	residues 1 to 387 of 387 are 94.83 pct identical to residues 1 to 387 of 387 from Escherichia coli K-12 : B2368; multidrug resistance protein K	complement(2463378..2464541)	Shigella flexneri 2a str. 2457T	1078853
NP_837947.1	CDS	evgA	NC_004741.1	2464957	2465571	D	response regulator in two-component regulatory system with EvgS; phosphorylated EvgA activates ompC, emrKY, gadABC, hdeAB and others genes; involved in acid resistance, osmotic adaption, and drug resistance; DNA-binding transcriptional activator EvgA	2464957..2465571	Shigella flexneri 2a str. 2457T	1078854
NP_837948.1	CDS	evgS	NC_004741.1	2465576	2469169	D	residues 1 to 1197 of 1197 are 94.23 pct identical to residues 1 to 1197 of 1197 from Escherichia coli K-12 : B2370; hybrid sensory histidine kinase in two-component regulatory system with EvgA	2465576..2469169	Shigella flexneri 2a str. 2457T	1080966
NP_837949.2	CDS	yfdE	NC_004741.1	2469225	2470409	R	residues 1 to 381 of 381 are 98.42 pct identical to residues 14 to 394 of 394 from Escherichia coli K-12 : B2371; hypothetical protein	complement(2469225..2470409)	Shigella flexneri 2a str. 2457T	1080924
NP_837950.1	CDS	S2577	NC_004741.1	2471457	2473151	R	catalyzes the formation of formyl-CoA from oxalyl-CoA; oxalyl-CoA decarboxylase	complement(2471457..2473151)	Shigella flexneri 2a str. 2457T	1076616
NP_837951.1	CDS	S2578	NC_004741.1	2473205	2474455	R	catalyzes the formation of oxalyl-CoA from oxalate and Formyl-CoA; formyl-coenzyme A transferase	complement(2473205..2474455)	Shigella flexneri 2a str. 2457T	1078850
NP_837952.1	CDS	S2579	NC_004741.1	2474968	2475591	R	residues 1 to 207 of 207 are 90.99 pct identical to residues 1 to 211 of 211 from Escherichia coli K-12 : B2375; hypothetical protein	complement(2474968..2475591)	Shigella flexneri 2a str. 2457T	1078857
NP_837953.1	CDS	S2580	NC_004741.1	2475888	2476163	D	residues 17 to 91 of 91 are 92.00 pct identical to residues 17 to 91 of 91 from Escherichia coli K-12 : B2376; hypothetical protein	2475888..2476163	Shigella flexneri 2a str. 2457T	1076631
NP_837954.1	CDS	S2581	NC_004741.1	2476240	2476482	R	residues 1 to 80 of 80 are 98.75 pct identical to residues 1 to 80 of 80 from Escherichia coli K-12 : B2377; hypothetical protein	complement(2476240..2476482)	Shigella flexneri 2a str. 2457T	1078856
NP_837955.2	CDS	ddg	NC_004741.1	2476835	2477755	D	Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(palmitoleoyl)-lipid IVA in cells subjected to cold shock; lipid A biosynthesis palmitoleoyl acyltransferase	2476835..2477755	Shigella flexneri 2a str. 2457T	1076653
NP_837956.1	CDS	S2583	NC_004741.1	2478246	2479484	R	residues 1 to 412 of 412 are 99.27 pct identical to residues 1 to 412 of 412 from Escherichia coli K-12 : B2379; aminotransferase	complement(2478246..2479484)	Shigella flexneri 2a str. 2457T	1078858
NP_837957.1	CDS	S2585	NC_004741.1	2481362	2482096	D	residues 1 to 244 of 244 are 93.03 pct identical to residues 1 to 244 of 244 from Escherichia coli K-12 : B2381; 2-component transcriptional regulator	2481362..2482096	Shigella flexneri 2a str. 2457T	1078860
NP_837958.1	CDS	S2586	NC_004741.1	2482109	2482681	D	residues 1 to 190 of 190 are 97.89 pct identical to residues 1 to 190 of 285 from Escherichia coli K-12 : B2382; ARAC-type regulatory protein	2482109..2482681	Shigella flexneri 2a str. 2457T	1078861
NP_837959.1	CDS	S2588	NC_004741.1	2482969	2485464	R	residues 1 to 831 of 831 are 95.54 pct identical to residues 1 to 831 of 831 from Escherichia coli K-12 : B2383; PTS system enzyme IIA component, enzyme I	complement(2482969..2485464)	Shigella flexneri 2a str. 2457T	1078863
NP_837960.1	CDS	S2589	NC_004741.1	2485489	2486526	R	metalloprotein; exoaminopeptidase	complement(2485489..2486526)	Shigella flexneri 2a str. 2457T	1078865
NP_837961.1	CDS	S2591	NC_004741.1	2487624	2488871	R	residues 1 to 415 of 415 are 93.25 pct identical to residues 1 to 415 of 415 from Escherichia coli K-12 : B2386; transporter	complement(2487624..2488871)	Shigella flexneri 2a str. 2457T	1079790
NP_837962.1	CDS	S2592	NC_004741.1	2488893	2489219	R	residues 1 to 108 of 108 are 88.88 pct identical to residues 1 to 108 of 108 from Escherichia coli K-12 : B2387; PTS system enzyme IIB component	complement(2488893..2489219)	Shigella flexneri 2a str. 2457T	1078866
NP_837963.1	CDS	glk	NC_004741.1	2489438	2490403	R	catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate; glucokinase	complement(2489438..2490403)	Shigella flexneri 2a str. 2457T	1078864
NP_837964.1	CDS	S2594	NC_004741.1	2490607	2491863	D	residues 1 to 418 of 418 are 77.27 pct identical to residues 1 to 418 of 418 from Escherichia coli K-12 : B2389; hypothetical protein	2490607..2491863	Shigella flexneri 2a str. 2457T	1076686
NP_837965.1	CDS	S2595	NC_004741.1	2491978	2492304	D	residues 1 to 91 of 108 are 81.31 pct identical to residues 1 to 91 of 108 from Escherichia coli K-12 : B2390; hypothetical protein	2491978..2492304	Shigella flexneri 2a str. 2457T	1078867
NP_837967.1	CDS	mntH	NC_004741.1	2492445	2493683	R	residues 1 to 412 of 412 are 99.75 pct identical to residues 1 to 412 of 412 from Escherichia coli K-12 : B2392; manganese transport protein MntH	complement(2492445..2493683)	Shigella flexneri 2a str. 2457T	1078869
NP_837968.1	CDS	nupC	NC_004741.1	2494019	2495221	D	residues 1 to 400 of 400 are 90.49 pct identical to residues 1 to 400 of 400 from Escherichia coli K-12 : B2393; permease of transport system for 3 nucleosides	2494019..2495221	Shigella flexneri 2a str. 2457T	1078870
NP_837970.1	CDS	yfeC	NC_004741.1	2498017	2498361	D	residues 1 to 114 of 114 are 100.00 pct identical to residues 6 to 119 of 119 from Escherichia coli K-12 : B2398; hypothetical protein	2498017..2498361	Shigella flexneri 2a str. 2457T	1078875
NP_837971.1	CDS	yfeD	NC_004741.1	2498384	2498755	D	residues 1 to 123 of 123 are 99.18 pct identical to residues 8 to 130 of 130 from Escherichia coli K-12 : B2399; hypothetical protein	2498384..2498755	Shigella flexneri 2a str. 2457T	1078876
NP_837972.1	CDS	gltX	NC_004741.1	2498807	2500222	R	Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase	complement(2498807..2500222)	Shigella flexneri 2a str. 2457T	1078877
NP_837973.1	CDS	flxA	NC_004741.1	2501032	2501373	D	residues 16 to 88 of 88 are 41.89 pct identical to residues 14 to  of 84 from Escherichia coli K-12 : B1566; hypothetical protein	2501032..2501373	Shigella flexneri 2a str. 2457T	1078881
NP_837974.1	CDS	yfeR	NC_004741.1	2501364	2502290	R	residues 1 to 308 of 308 are 88.96 pct identical to residues 1 to 308 of 308 from Escherichia coli K-12 : B2409; LYSR-type transcriptional regulator	complement(2501364..2502290)	Shigella flexneri 2a str. 2457T	1078882
NP_837975.1	CDS	yfeH	NC_004741.1	2502380	2503378	D	residues 1 to 332 of 332 are 96.08 pct identical to residues 1 to 332 of 332 from Escherichia coli K-12 : B2410; cytochrome oxidase	2502380..2503378	Shigella flexneri 2a str. 2457T	1078883
NP_837976.1	CDS	ligA	NC_004741.1	2503595	2505610	R	this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; NAD-dependent DNA ligase LigA	complement(2503595..2505610)	Shigella flexneri 2a str. 2457T	1078884
NP_837977.1	CDS	zipA	NC_004741.1	2505681	2506664	R	interacts with cell division protein FitsZ and may be required to anchor septal ring structure; cell division protein ZipA	complement(2505681..2506664)	Shigella flexneri 2a str. 2457T	1078885
NP_837978.1	CDS	cysZ	NC_004741.1	2506897	2507658	D	role in sulfur assimilation; sulfate transport protein CysZ	2506897..2507658	Shigella flexneri 2a str. 2457T	1078886
NP_837979.1	CDS	cysK	NC_004741.1	2507843	2508814	D	CysK; forms a complex with serine acetyltransferase CysE; functions in cysteine biosynthesis; cysteine synthase A	2507843..2508814	Shigella flexneri 2a str. 2457T	1078887
NP_837980.1	CDS	ptsH	NC_004741.1	2509198	2509455	D	residues 1 to 85 of 85 are 100.00 pct identical to residues 1 to 85 of 85 from Escherichia coli K-12 : B2415; phosphohistidinoprotein-hexose phosphotransferase component of PTS system (Hpr)	2509198..2509455	Shigella flexneri 2a str. 2457T	1078888
NP_837981.1	CDS	ptsI	NC_004741.1	2509500	2511227	D	Phosphotransferase system, enzyme I; transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein; part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active-transport system; phosphoenolpyruvate-protein phosphotransferase	2509500..2511227	Shigella flexneri 2a str. 2457T	1078889
NP_837982.1	CDS	crr	NC_004741.1	2511268	2511777	D	functions in phosphoenolpyruvate-(PEP)-dependent phosphotransferase (PTS) system; functions in the transport and phosphorylation of glucose; glucose-specific PTS system component	2511268..2511777	Shigella flexneri 2a str. 2457T	1078890
NP_837983.1	CDS	pdxK	NC_004741.1	2511819	2512670	R	catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal; pyridoxal kinase	complement(2511819..2512670)	Shigella flexneri 2a str. 2457T	1078891
NP_837984.1	CDS	yfeK	NC_004741.1	2512775	2513149	D	residues 1 to 124 of 124 are 96.77 pct identical to residues 1 to 124 of 124 from Escherichia coli K-12 : B2419; hypothetical protein	2512775..2513149	Shigella flexneri 2a str. 2457T	1078892
NP_837985.1	CDS	cysM	NC_004741.1	2514109	2515020	R	catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; cysteine synthase B	complement(2514109..2515020)	Shigella flexneri 2a str. 2457T	1078894
NP_837986.1	CDS	cysA	NC_004741.1	2515154	2516251	R	residues 1 to 365 of 365 are 99.17 pct identical to residues 1 to 365 of 365 from Escherichia coli K-12 : B2422; sulfate/thiosulfate transporter subunit	complement(2515154..2516251)	Shigella flexneri 2a str. 2457T	1078895
NP_837987.1	CDS	cysW	NC_004741.1	2516241	2516690	R	residues 1 to 149 of 149 are 88.59 pct identical to residues 1 to 149 of 149 from Escherichia coli K-12 : B2423; sulfate transport system permease W protein	complement(2516241..2516690)	Shigella flexneri 2a str. 2457T	1078896
NP_837988.1	CDS	cysU	NC_004741.1	2517116	2517949	R	residues 1 to 277 of 277 are 83.03 pct identical to residues 1 to 277 of 277 from Escherichia coli K-12 : B2424; sulfate/thiosulfate transporter subunit	complement(2517116..2517949)	Shigella flexneri 2a str. 2457T	1078897
NP_837989.1	CDS	cysP	NC_004741.1	2517949	2518965	R	residues 21 to 337 of 338 are 94.95 pct identical to residues 21 to 337 of 338 from Escherichia coli K-12 : B2425; thiosulfate transporter subunit	complement(2517949..2518965)	Shigella flexneri 2a str. 2457T	1078898
NP_837990.1	CDS	ucpA	NC_004741.1	2519269	2520060	R	residues 1 to 263 of 263 are 98.85 pct identical to residues 23 to 285 of 285 from Escherichia coli K-12 : B2426; short chain dehydrogenase	complement(2519269..2520060)	Shigella flexneri 2a str. 2457T	1078899
NP_837991.1	CDS	yfeT	NC_004741.1	2520247	2521047	R	residues 1 to 264 of 266 are 96.96 pct identical to residues 1 to 264 of 285 from Escherichia coli K-12 : B2427; hypothetical protein	complement(2520247..2521047)	Shigella flexneri 2a str. 2457T	1078900
NP_837992.1	CDS	murQ	NC_004741.1	2521211	2522107	D	catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway; N-acetylmuramic acid-6-phosphate etherase	2521211..2522107	Shigella flexneri 2a str. 2457T	1078901
NP_837993.1	CDS	murP	NC_004741.1	2522111	2523535	D	belongs to PEP-dependent PTS system; contains the PTS EIIBC domains; involved in uptake of exogenous N-acetylmuramic acid (MurNAc); requires crr-encoded enzyme IIA-glucose component; N-acetylmuramic acid phosphotransfer permease	2522111..2523535	Shigella flexneri 2a str. 2457T	1078902
NP_837994.1	CDS	S2632	NC_004741.1	2523715	2524614	R	residues 1 to 299 of 299 are 99.33 pct identical to residues 10 to 308 of 308 from Escherichia coli K-12 : B2431; hypothetical protein	complement(2523715..2524614)	Shigella flexneri 2a str. 2457T	1078904
NP_837995.1	CDS	S2633	NC_004741.1	2524710	2525285	R	residues 1 to 191 of 191 are 99.47 pct identical to residues 1 to 191 of 191 from Escherichia coli K-12 : B2432; hypothetical protein	complement(2524710..2525285)	Shigella flexneri 2a str. 2457T	1078905
NP_837996.1	CDS	S2634	NC_004741.1	2525346	2525795	R	residues 1 to 149 of 149 are 79.19 pct identical to residues 3 to 151 of 151 from Escherichia coli K-12 : B2433; hypothetical protein	complement(2525346..2525795)	Shigella flexneri 2a str. 2457T	1078906
NP_837997.1	CDS	S2635	NC_004741.1	2525782	2526207	R	residues 1 to 141 of 141 are 99.29 pct identical to residues 38 to 178 of 178 from Escherichia coli K-12 : B2434; acetyltransferase	complement(2525782..2526207)	Shigella flexneri 2a str. 2457T	1078908
NP_837998.1	CDS	amiA	NC_004741.1	2526421	2527290	D	residues 1 to 289 of 289 are 95.15 pct identical to residues 1 to 289 of 289 from Escherichia coli K-12 : B2435; N-acetylmuramoyl-l-alanine amidase I	2526421..2527290	Shigella flexneri 2a str. 2457T	1078909
NP_837999.1	CDS	yfeG	NC_004741.1	2528200	2528760	R	residues 1 to 186 of 186 are 97.84 pct identical to residues 165 to 350 of 350 from Escherichia coli K-12 : B2437; ARAC-type regulatory protein	complement(2528200..2528760)	Shigella flexneri 2a str. 2457T	1078911
NP_838000.1	CDS	S2639	NC_004741.1	2529298	2529798	R	residues 1 to 166 of 166 are 80.72 pct identical to residues 3 to 168 of 168 from Escherichia coli K-12 : B2438; hypothetical protein	complement(2529298..2529798)	Shigella flexneri 2a str. 2457T	1078912
NP_838001.1	CDS	S2641	NC_004741.1	2529811	2530470	R	residues 1 to 219 of 219 are 97.71 pct identical to residues 1 to 219 of 219 from Escherichia coli K-12 : B2439; hypothetical protein	complement(2529811..2530470)	Shigella flexneri 2a str. 2457T	1078913
NP_838002.1	CDS	S2642	NC_004741.1	2531823	2532224	D	no significant similarities; hypothetical protein	2531823..2532224	Shigella flexneri 2a str. 2457T	1078914
NP_838003.1	CDS	S2643	NC_004741.1	2533162	2533557	D	no significant similarities; hypothetical protein	2533162..2533557	Shigella flexneri 2a str. 2457T	1078915
NP_838004.1	CDS	S2644	NC_004741.1	2533575	2533838	D	no significant similarities; hypothetical protein	2533575..2533838	Shigella flexneri 2a str. 2457T	1078916
NP_838005.1	CDS	S2645	NC_004741.1	2533861	2534403	D	no significant similarities; hypothetical protein	2533861..2534403	Shigella flexneri 2a str. 2457T	1078917
NP_838006.1	CDS	S2646	NC_004741.1	2534500	2534829	D	residues 44 to 105 of 109 are 36.76 pct identical to residues 14 to 81 of 81 from NRprotein_Feb2003 : >ref|NP_416939.1| orf, hypothetical protein [Escherichia coli K12] sp|P76544|YFFM_ECOLI Hypothetical protein yffM pir||C65019 hypothetical protein b2444 - Escherichia coli (strain K-12) gb|AAC75497.1| orf, hypothetical protein [Escherichia coli K12]; hypothetical protein	2534500..2534829	Shigella flexneri 2a str. 2457T	1078918
NP_838007.1	CDS	S2647	NC_004741.1	2534868	2535074	D	no significant similarities; hypothetical protein	2534868..2535074	Shigella flexneri 2a str. 2457T	1078919
NP_838008.1	CDS	S2648	NC_004741.1	2535659	2535871	D	residues 1 to 70 of 70 are 100.00 pct identical to residues 92 to 161 of 161 from GenPept : >dbj|BAA84896.1| (AB024946) orf61 [Escherichia coli]; hypothetical protein	2535659..2535871	Shigella flexneri 2a str. 2457T	1078920
NP_838009.1	CDS	S2649	NC_004741.1	2536123	2537583	D	residues 1 to 486 of 486 are 87.86 pct identical to residues 1 to 486 of 486 from GenPept : >dbj|BAA84897.1| (AB024946) orf62 [Escherichia coli]; amino acid antiporter	2536123..2537583	Shigella flexneri 2a str. 2457T	1078921
NP_838010.1	CDS	S2650	NC_004741.1	2538545	2538940	R	residues 1 to 131 of 131 are 97.70 pct identical to residues 1 to 131 of 131 from GenPept : >dbj|BAA84899.1| (AB024946) InsB [Escherichia coli]; iso-IS1 ORF2	complement(2538545..2538940)	Shigella flexneri 2a str. 2457T	1078922
NP_838011.1	CDS	S2651	NC_004741.1	2538967	2539239	R	residues 1 to 90 of 90 are 96.66 pct identical to residues 1 to 90 of 90 from GenPept : >dbj|BAA84900.1| (AB024946) InsA [Escherichia coli]; IS1N orfA	complement(2538967..2539239)	Shigella flexneri 2a str. 2457T	1078923
NP_838012.1	CDS	S2654	NC_004741.1	2541106	2541585	R	residues 1 to 159 of 159 are 98.11 pct identical to residues 1 to 159 of 159 from Escherichia coli K-12 : B2461; hypothetical protein	complement(2541106..2541585)	Shigella flexneri 2a str. 2457T	1078926
NP_838013.1	CDS	S2655	NC_004741.1	2541598	2542005	R	residues 1 to 131 of 131 are 100.00 pct identical to residues 5 to 135 of 135 from Escherichia coli K-12 : B2462; hypothetical protein	complement(2541598..2542005)	Shigella flexneri 2a str. 2457T	1077682
NP_838014.1	CDS	S2656	NC_004741.1	2542226	2544505	R	NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme	complement(2542226..2544505)	Shigella flexneri 2a str. 2457T	1078927
NP_838015.1	CDS	talA	NC_004741.1	2544794	2545744	D	Maintains the balance of metabolites in the pentose-phosphate pathway; transaldolase A	2544794..2545744	Shigella flexneri 2a str. 2457T	1078928
NP_838016.1	CDS	tktB	NC_004741.1	2545764	2547767	D	catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase	2545764..2547767	Shigella flexneri 2a str. 2457T	1078929
NP_838017.1	CDS	S2659	NC_004741.1	2547870	2548913	R	residues 1 to 347 of 347 are 98.84 pct identical to residues 1 to 347 of 347 from Escherichia coli K-12 : B2466; hypothetical protein	complement(2547870..2548913)	Shigella flexneri 2a str. 2457T	1078930
NP_838018.1	CDS	yffH	NC_004741.1	2549039	2549614	R	residues 1 to 191 of 191 are 97.90 pct identical to residues 1 to 191 of 191 from Escherichia coli K-12 : B2467; hypothetical protein	complement(2549039..2549614)	Shigella flexneri 2a str. 2457T	1078931
NP_838019.1	CDS	yffG	NC_004741.1	2549682	2551661	R	unknown function; in E. coli the aegA gene is regulated by Fnr, NarXL, and NarQ (but not ArcA), induced under anaerobic conditions and repressed in the presence of nitrate (anaerobic); oxidoreductase Fe-S binding subunit	complement(2549682..2551661)	Shigella flexneri 2a str. 2457T	1078932
NP_838020.1	CDS	acrD	NC_004741.1	2553786	2556899	D	residues 1 to 1037 of 1037 are 97.01 pct identical to residues 1 to 1037 of 1037 from Escherichia coli K-12 : B2470; acriflavine resistance, integral membrane protein, possible efflux pump; aminoglycoside/multidrug efflux system	2553786..2556899	Shigella flexneri 2a str. 2457T	1078934
NP_838021.1	CDS	yffB	NC_004741.1	2557438	2557794	D	residues 1 to 118 of 118 are 98.30 pct identical to residues 1 to 118 of 118 from Escherichia coli K-12 : B2471; hypothetical protein	2557438..2557794	Shigella flexneri 2a str. 2457T	1078935
NP_838022.1	CDS	dapE	NC_004741.1	2557798	2558925	D	dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase	2557798..2558925	Shigella flexneri 2a str. 2457T	1078936
NP_838023.1	CDS	ypfH	NC_004741.1	2559263	2559961	R	Displays esterase activity toward palmitoyl-CoA and pNP-butyrate; esterase YpfH	complement(2559263..2559961)	Shigella flexneri 2a str. 2457T	1078937
NP_838024.1	CDS	ypfI	NC_004741.1	2560035	2562050	R	residues 1 to 671 of 671 are 88.07 pct identical to residues 1 to 671 of 671 from Escherichia coli K-12 : B2474; hypothetical protein	complement(2560035..2562050)	Shigella flexneri 2a str. 2457T	1078938
NP_838025.1	CDS	S2668	NC_004741.1	2562065	2562928	R	residues 1 to 287 of 287 are 89.89 pct identical to residues 1 to 287 of 287 from Escherichia coli K-12 : B2475; hypothetical protein	complement(2562065..2562928)	Shigella flexneri 2a str. 2457T	1078939
NP_838026.1	CDS	purC	NC_004741.1	2563096	2563809	R	catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase	complement(2563096..2563809)	Shigella flexneri 2a str. 2457T	1078940
NP_838027.1	CDS	nlpB	NC_004741.1	2564022	2565056	R	residues 1 to 344 of 344 are 84.88 pct identical to residues 2 to 345 of 345 from Escherichia coli K-12 : B2477; lipoprotein	complement(2564022..2565056)	Shigella flexneri 2a str. 2457T	1078941
NP_838028.1	CDS	dapA	NC_004741.1	2565073	2565951	R	catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase	complement(2565073..2565951)	Shigella flexneri 2a str. 2457T	1078942
NP_838029.1	CDS	bcp	NC_004741.1	2566669	2567139	D	bacterioferritin comigratory protein; thiol peroxidase; thioredoxin-dependent; hydroperoxide peroxidase; in Escherichia coli this enzyme preferentially reduces linoleic acid hydroperoxide; contains an active site cysteine; thioredoxin-dependent thiol peroxidase	2566669..2567139	Shigella flexneri 2a str. 2457T	1078944
NP_838030.1	CDS	hyfA	NC_004741.1	2567392	2568009	D	residues 1 to 204 of 205 are 98.03 pct identical to residues 14 to 217 of 218 from Escherichia coli K-12 : B2481; hydrogenase 4 Fe-S subunit	2567392..2568009	Shigella flexneri 2a str. 2457T	1078945
NP_838031.1	CDS	hyfC	NC_004741.1	2570037	2570984	D	residues 1 to 315 of 315 are 80.31 pct identical to residues 8 to 322 of 322 from Escherichia coli K-12 : B2483; hydrogenase 4 membrane subunit	2570037..2570984	Shigella flexneri 2a str. 2457T	1078948
NP_838032.1	CDS	hyfD	NC_004741.1	2571001	2572440	D	residues 1 to 479 of 479 are 89.35 pct identical to residues 1 to 479 of 479 from Escherichia coli K-12 : B2484; hydrogenase 4 subunit D	2571001..2572440	Shigella flexneri 2a str. 2457T	1078949
NP_838033.1	CDS	hyfE	NC_004741.1	2572452	2573102	D	interacts with formate dehydrogenase to produce an active formate hydrogenlyase complex which cleaves formate to dihydrogen and carbon dioxide; hydrogenase 4 membrane subunit	2572452..2573102	Shigella flexneri 2a str. 2457T	1078950
NP_838034.1	CDS	hyfF	NC_004741.1	2573107	2574693	D	Catalyzes the transfer of electrons from NADH to ubiquinone; hydrogenase 4 subunit F	2573107..2574693	Shigella flexneri 2a str. 2457T	1078951
NP_838035.1	CDS	hyfH	NC_004741.1	2576407	2576952	D	probable electron transfer protein for hydrogenase 4; hydrogenase 4 is believed to be silent in E. coli under conditions tested so far; hydrogenase 4 subunit H	2576407..2576952	Shigella flexneri 2a str. 2457T	1078953
NP_838036.1	CDS	hyfI	NC_004741.1	2576949	2577707	D	residues 1 to 252 of 252 are 95.23 pct identical to residues 1 to 252 of 252 from Escherichia coli K-12 : B2489; hydrogenase 4 Fe-S subunit	2576949..2577707	Shigella flexneri 2a str. 2457T	1078954
NP_838037.1	CDS	S2683	NC_004741.1	2577637	2578113	D	residues 1 to 158 of 158 are 99.36 pct identical to residues 1 to 158 of 158 from Escherichia coli K-12 : B2490; protein processing element	2577637..2578113	Shigella flexneri 2a str. 2457T	1078955
NP_838038.1	CDS	perM	NC_004741.1	2581143	2582204	R	residues 1 to 353 of 353 are 77.62 pct identical to residues 1 to 353 of 353 from Escherichia coli K-12 : B2493; permease	complement(2581143..2582204)	Shigella flexneri 2a str. 2457T	1078957
NP_838039.1	CDS	S2687	NC_004741.1	2582417	2583880	D	residues 1 to 487 of 487 are 94.86 pct identical to residues 1 to 487 of 487 from Escherichia coli K-12 : B2494; hypothetical protein	2582417..2583880	Shigella flexneri 2a str. 2457T	1078959
NP_838040.1	CDS	S2688	NC_004741.1	2583901	2584260	D	residues 1 to 119 of 119 are 98.31 pct identical to residues 1 to 119 of 119 from Escherichia coli K-12 : B2495; oxidoreductase	2583901..2584260	Shigella flexneri 2a str. 2457T	1078960
NP_838041.1	CDS	S2689	NC_004741.1	2584393	2585139	R	controls initiation of DNA replication by inhibiting re-initiation of replication, promotes hydrolysis of DnaA-bound ATP; DNA replication initiation factor	complement(2584393..2585139)	Shigella flexneri 2a str. 2457T	1078961
NP_838042.1	CDS	uraA	NC_004741.1	2585189	2586478	R	residues 1 to 429 of 429 are 96.27 pct identical to residues 1 to 429 of 429 from Escherichia coli K-12 : B2497; uracil transporter	complement(2585189..2586478)	Shigella flexneri 2a str. 2457T	1078962
NP_838043.1	CDS	upp	NC_004741.1	2586564	2587190	R	Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase	complement(2586564..2587190)	Shigella flexneri 2a str. 2457T	1078963
NP_838044.1	CDS	purM	NC_004741.1	2587499	2588551	D	catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase	2587499..2588551	Shigella flexneri 2a str. 2457T	1078964
NP_838045.1	CDS	purN	NC_004741.1	2588551	2589189	D	glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate; phosphoribosylglycinamide formyltransferase	2588551..2589189	Shigella flexneri 2a str. 2457T	1078965
NP_838046.1	CDS	ppk	NC_004741.1	2589361	2591427	D	catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase	2589361..2591427	Shigella flexneri 2a str. 2457T	1078966
NP_838047.1	CDS	ppx	NC_004741.1	2591432	2592973	D	residues 1 to 513 of 513 are 97.66 pct identical to residues 1 to 513 of 513 from Escherichia coli K-12 : B2502; exopolyphosphatase	2591432..2592973	Shigella flexneri 2a str. 2457T	1078967
NP_838048.1	CDS	S2697	NC_004741.1	2594187	2594489	D	residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAF09029.1| (AF139596) unknown [Shigella flexneri]; IS600 orfA	2594187..2594489	Shigella flexneri 2a str. 2457T	1078969
NP_838049.1	CDS	S2698	NC_004741.1	2594630	2595343	D	residues 1 to 237 of 237 are 91.13 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAK18576.1|AF348706_265 (AF348706) IS600 orfB [Shigella flexneri]; IS600 orfB	2594630..2595343	Shigella flexneri 2a str. 2457T	1078970
NP_838050.1	CDS	S2700	NC_004741.1	2596873	2597064	D	residues 1 to 63 of 63 are 100.00 pct identical to residues 1 to 63 of 63 from Escherichia coli K-12 : B2504; hypothetical protein	2596873..2597064	Shigella flexneri 2a str. 2457T	1078971
NP_838051.1	CDS	S2701	NC_004741.1	2597375	2597893	D	residues 1 to 172 of 172 are 76.16 pct identical to residues 1 to 172 of 172 from Escherichia coli K-12 : B2505; outer membrane lipoprotein	2597375..2597893	Shigella flexneri 2a str. 2457T	1078972
NP_838052.1	CDS	S2702	NC_004741.1	2597909	2598448	D	residues 1 to 179 of 179 are 84.91 pct identical to residues 1 to 179 of 179 from Escherichia coli K-12 : B2506; hypothetical protein	2597909..2598448	Shigella flexneri 2a str. 2457T	1078973
NP_838053.1	CDS	S2703	NC_004741.1	2598850	2599665	D	residues 1 to 271 of 271 are 94.09 pct identical to residues 1 to 271 of 271 from GenPept : >gb|AAK64592.1| (AY034138) dihydropteroate synthase [Vibrio cholerae]; dihydropteroate synthase	2598850..2599665	Shigella flexneri 2a str. 2457T	1078974
NP_838054.1	CDS	S2704	NC_004741.1	2599752	2600054	D	residues 14 to 100 of 100 are 100.00 pct identical to residues 28 to 114 of 114 from GenPept : >dbj|BAB79612.1| (AB076707) orf7 [Salmonella enterica subsp. enterica serovar Choleraesuis]; phosphoglucosamine mutase	2599752..2600054	Shigella flexneri 2a str. 2457T	1078975
NP_838055.1	CDS	S2705	NC_004741.1	2600230	2601723	R	residues 1 to 497 of 497 are 100.00 pct identical to residues 1 to 497 of 497 from GenPept : >gb|AAK64580.1| (AY034138)  transposase [Vibrio cholerae]; transposase	complement(2600230..2601723)	Shigella flexneri 2a str. 2457T	1078976
NP_838056.1	CDS	S2706	NC_004741.1	2601934	2602158	R	residues 3 to 69 of 74 are 56.52 pct identical to residues 2 to 70 of 71 from GenPept : >gb|AAD21670.1| (AF133830) hypothetical protein [Shuttle vector pME6030]; hypothetical protein	complement(2601934..2602158)	Shigella flexneri 2a str. 2457T	1078977
NP_838057.1	CDS	parA	NC_004741.1	2602155	2602892	R	residues 12 to 216 of 245 are 67.31 pct identical to residues 15 to 219 of 219 from GenPept : >gb|AAA26414.1| (M59825) parA [Plasmid RP4]; resolvase	complement(2602155..2602892)	Shigella flexneri 2a str. 2457T	1078978
NP_838058.1	CDS	S2708	NC_004741.1	2603040	2603372	D	residues 16 to 97 of 110 are 53.57 pct identical to residues 8 to 91 of 109 from GenPept : >gb|AAK23484.1| (AE005825) transcriptional regulator, ArsR family [Caulobacter crescentus CB15]; transcriptional regulator	2603040..2603372	Shigella flexneri 2a str. 2457T	1078979
NP_838059.1	CDS	S2709	NC_004741.1	2603369	2604136	D	residues 13 to 250 of 255 are 66.39 pct identical to residues 5 to 243 of 244 from GenPept : >gb|AAK23485.1| (AE005825) arsenical resistance protein ArsH, [Caulobacter crescentus CB15]; arsenical resistance protein	2603369..2604136	Shigella flexneri 2a str. 2457T	1078980
NP_838060.1	CDS	S2710	NC_004741.1	2604133	2604639	D	residues 1 to 165 of 168 are 54.54 pct identical to residues 1 to 165 of 169 from GenPept : >dbj|BAB50737.1| (AP003003) arsenate reductase [Mesorhizobium loti]; arsenate reductase	2604133..2604639	Shigella flexneri 2a str. 2457T	1078981
NP_838061.1	CDS	S2711	NC_004741.1	2604636	2605703	D	residues 17 to 353 of 355 are 65.68 pct identical to residues 1 to 338 of 352 from GenPept : >gb|AAL42497.1| (AE009108) sodium bile acid symporter family protein [Agrobacterium tumefaciens str. C58 (U. Washington)]; sodium bile acid symporter family protein	2604636..2605703	Shigella flexneri 2a str. 2457T	1078982
NP_838062.1	CDS	S2715	NC_004741.1	2606599	2607087	R	no significant similarities; hypothetical protein	complement(2606599..2607087)	Shigella flexneri 2a str. 2457T	1078983
NP_838063.1	CDS	trbL	NC_004741.1	2607237	2608043	R	residues 8 to 267 of 268 are 42.69 pct identical to residues 3 to 252 of 528 from GenPept : >gb|AAA26438.1| (M93696) trbL [Plasmid RP4]; mating pair formation protein	complement(2607237..2608043)	Shigella flexneri 2a str. 2457T	1078984
NP_838064.1	CDS	trbJ	NC_004741.1	2608282	2609061	R	residues 28 to 259 of 259 are 52.58 pct identical to residues 26 to 257 of 257 from GenPept : >emb|CAD24376.1| (AJ431260) TrbJ protein [uncultured bacterium]; conjugal transfer protein TrbJ	complement(2608282..2609061)	Shigella flexneri 2a str. 2457T	1078985
NP_838065.1	CDS	S2719	NC_004741.1	2609202	2609390	R	residues 1 to 61 of 62 are 54.41 pct identical to residues 3 to 70 of 86 from GenPept : >gb|AAF84399.1|AE003987_3 (AE003987) plasmid stabilization protein [Xylella fastidiosa 9a5c]; stabilization protein	complement(2609202..2609390)	Shigella flexneri 2a str. 2457T	1078986
NP_838066.1	CDS	repC	NC_004741.1	2610423	2611304	R	residues 6 to 293 of 293 are 61.35 pct identical to residues 13 to 299 of 299 from GenPept : >gb|AAA27382.1| (M73777) replication protein C [Plasmid pTF-FC2]; replication protein C	complement(2610423..2611304)	Shigella flexneri 2a str. 2457T	1078987
NP_838067.1	CDS	S2721	NC_004741.1	2611291	2612118	R	residues 3 to 275 of 275 are 81.68 pct identical to residues 7 to 279 of 279 from GenPept : >emb|CAC20104.1| (Y19120) replication protein A [Dichelobacter nodosus]; DNA helicase	complement(2611291..2612118)	Shigella flexneri 2a str. 2457T	1078988
NP_838068.1	CDS	S2722	NC_004741.1	2612123	2612344	R	no significant similarities; hypothetical protein	complement(2612123..2612344)	Shigella flexneri 2a str. 2457T	1078989
NP_838069.1	CDS	S2723	NC_004741.1	2612492	2613694	R	residues 1 to 396 of 400 are 57.43 pct identical to residues 3 to 399 of 420 from GenPept : >dbj|BAB53138.1| (AP003010) CP4-like integrase [Mesorhizobium loti]; integrase	complement(2612492..2613694)	Shigella flexneri 2a str. 2457T	1078990
NP_838070.1	CDS	guaA	NC_004741.1	2613999	2615576	R	contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase	complement(2613999..2615576)	Shigella flexneri 2a str. 2457T	1078991
NP_838071.1	CDS	guaB	NC_004741.1	2615645	2617111	R	catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase	complement(2615645..2617111)	Shigella flexneri 2a str. 2457T	1078993
NP_838072.1	CDS	xseA	NC_004741.1	2617273	2618643	D	bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit	2617273..2618643	Shigella flexneri 2a str. 2457T	1078994
NP_838073.1	CDS	S2728	NC_004741.1	2618640	2618891	R	residues 1 to 83 of 83 are 97.59 pct identical to residues 1 to 83 of 83 from Escherichia coli K-12 : B2510; hypothetical protein	complement(2618640..2618891)	Shigella flexneri 2a str. 2457T	1078995
NP_838074.1	CDS	engA	NC_004741.1	2618925	2620397	R	EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA	complement(2618925..2620397)	Shigella flexneri 2a str. 2457T	1078996
NP_838075.1	CDS	S2730	NC_004741.1	2620515	2621693	R	with YaeT, YfiO, and NlpB forms a complex involved in outer membrane protein biogenesis; outer membrane protein assembly complex subunit YfgL	complement(2620515..2621693)	Shigella flexneri 2a str. 2457T	1078997
NP_838076.1	CDS	S2731	NC_004741.1	2621704	2622324	R	residues 1 to 206 of 206 are 91.74 pct identical to residues 1 to 206 of 206 from Escherichia coli K-12 : B2513; hypothetical protein	complement(2621704..2622324)	Shigella flexneri 2a str. 2457T	1078998
NP_838077.1	CDS	hisS	NC_004741.1	2622342	2623616	R	catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase	complement(2622342..2623616)	Shigella flexneri 2a str. 2457T	1078999
NP_838078.1	CDS	ispG	NC_004741.1	2623719	2624846	R	catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase	complement(2623719..2624846)	Shigella flexneri 2a str. 2457T	1079000
NP_838079.1	CDS	yfgA	NC_004741.1	2624873	2625886	R	residues 1 to 337 of 337 are 80.71 pct identical to residues 1 to 337 of 337 from Escherichia coli K-12 : B2516; hypothetical protein	complement(2624873..2625886)	Shigella flexneri 2a str. 2457T	1079001
NP_838080.1	CDS	yfgB	NC_004741.1	2626171	2627325	R	residues 1 to 384 of 384 are 99.47 pct identical to residues 1 to 384 of 384 from Escherichia coli K-12 : B2517; hypothetical protein	complement(2626171..2627325)	Shigella flexneri 2a str. 2457T	1079002
NP_838081.1	CDS	ndk	NC_004741.1	2627475	2627906	R	catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase	complement(2627475..2627906)	Shigella flexneri 2a str. 2457T	1079003
NP_838082.1	CDS	S2738	NC_004741.1	2630171	2631367	R	residues 1 to 398 of 398 are 90.95 pct identical to residues 1 to 398 of 398 from GenPept : >gb|AAK18438.1|AF348706_127 (AF348706)  transposase for IS110 [Shigella flexneri]; ISSfl4 orf	complement(2630171..2631367)	Shigella flexneri 2a str. 2457T	1079005
NP_838083.1	CDS	sseB	NC_004741.1	2632898	2633674	R	enhances serine sensitivity caused by inhibition of homoserine dehydrogenase I; enhanced serine sensitivity protein SseB	complement(2632898..2633674)	Shigella flexneri 2a str. 2457T	1079007
NP_838084.1	CDS	pepB	NC_004741.1	2633816	2635099	R	catalyzes the removal of an N-terminal amino acid from a peptide or arylamide; aminopeptidase B	complement(2633816..2635099)	Shigella flexneri 2a str. 2457T	1079008
NP_838085.1	CDS	yfhJ	NC_004741.1	2635158	2635358	R	residues 1 to 66 of 66 are 100.00 pct identical to residues 1 to 66 of 66 from Escherichia coli K-12 : B2524; hypothetical protein	complement(2635158..2635358)	Shigella flexneri 2a str. 2457T	1079010
NP_838086.1	CDS	fdx	NC_004741.1	2635370	2635705	R	residues 1 to 111 of 111 are 100.00 pct identical to residues 1 to 111 of 111 from Escherichia coli K-12 : B2525; [2FE-2S] ferredoxin, electron carrer protein	complement(2635370..2635705)	Shigella flexneri 2a str. 2457T	1078311
NP_838087.1	CDS	hscA	NC_004741.1	2635707	2637557	R	involved in the maturation of iron-sulfur cluster-containing proteins; chaperone protein HscA	complement(2635707..2637557)	Shigella flexneri 2a str. 2457T	1079011
NP_838088.1	CDS	hscB	NC_004741.1	2637574	2638089	R	J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone; may function in biogenesis of iron-sulfur proteins; co-chaperone HscB	complement(2637574..2638089)	Shigella flexneri 2a str. 2457T	1080070
NP_838089.1	CDS	iscA	NC_004741.1	2638185	2638508	R	forms iron-sulfur clusters of ferredoxin [2FE-2S]; binds iron in the presence of the thioredoxin reductase system; forms homodimers and tetramers; similar to SufA protein; iron-sulfur cluster assembly protein	complement(2638185..2638508)	Shigella flexneri 2a str. 2457T	1079012
NP_838090.1	CDS	S2748	NC_004741.1	2638525	2638911	R	residues 1 to 128 of 128 are 100.00 pct identical to residues 1 to 128 of 128 from Escherichia coli K-12 : B2529; scaffold protein	complement(2638525..2638911)	Shigella flexneri 2a str. 2457T	1079014
NP_838091.1	CDS	yfhO	NC_004741.1	2638939	2640153	R	catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis; cysteine desulfurase	complement(2638939..2640153)	Shigella flexneri 2a str. 2457T	1079015
NP_838092.1	CDS	S2750	NC_004741.1	2640265	2640753	R	regulates the expression of the iscRSUA operon; DNA-binding transcriptional regulator IscR	complement(2640265..2640753)	Shigella flexneri 2a str. 2457T	1079016
NP_838093.1	CDS	S2751	NC_004741.1	2641023	2641763	R	residues 1 to 246 of 246 are 100.00 pct identical to residues 1 to 246 of 246 from Escherichia coli K-12 : B2532; ATP synthase subunit beta	complement(2641023..2641763)	Shigella flexneri 2a str. 2457T	1079018
NP_838094.1	CDS	suhB	NC_004741.1	2641882	2642685	D	residues 1 to 266 of 267 are 99.62 pct identical to residues 1 to 266 of 267 from Escherichia coli K-12 : B2533; inositol monophosphatase	2641882..2642685	Shigella flexneri 2a str. 2457T	1080455
NP_838095.1	CDS	S2753	NC_004741.1	2642830	2643684	D	residues 1 to 284 of 284 are 98.59 pct identical to residues 10 to 293 of 293 from Escherichia coli K-12 : B2534; enzyme	2642830..2643684	Shigella flexneri 2a str. 2457T	1079019
NP_838096.1	CDS	csiE	NC_004741.1	2643875	2645155	D	residues 1 to 426 of 426 are 96.47 pct identical to residues 8 to 433 of 433 from Escherichia coli K-12 : B2535; stationary phase inducible protein CsiE	2643875..2645155	Shigella flexneri 2a str. 2457T	1079020
NP_838097.1	CDS	hcaT	NC_004741.1	2645147	2646286	R	transporter of 3-phenylpropionate across the inner membrane; member of the major facilitator superfamily of transporters; 3-phenylpropionic acid transporter	complement(2645147..2646286)	Shigella flexneri 2a str. 2457T	1078286
NP_838098.1	CDS	hcaR	NC_004741.1	2646446	2647336	R	activator of 3-phenylpropionic acid catabolism; DNA-binding transcriptional regulator HcaR	complement(2646446..2647336)	Shigella flexneri 2a str. 2457T	1079021
NP_838099.1	CDS	hcaA1	NC_004741.1	2647472	2648833	D	residues 1 to 453 of 453 are 99.55 pct identical to residues 1 to 453 of 453 from Escherichia coli K-12 : B2538; large terminal subunit of phenylpropionate dioxygenase	2647472..2648833	Shigella flexneri 2a str. 2457T	1078029
NP_838100.1	CDS	hcaA2	NC_004741.1	2648830	2649348	D	residues 1 to 172 of 172 are 99.41 pct identical to residues 1 to 172 of 172 from Escherichia coli K-12 : B2539; 3-phenylpropionate dioxygenase subunit beta	2648830..2649348	Shigella flexneri 2a str. 2457T	1079025
NP_838101.1	CDS	hcaC	NC_004741.1	2649348	2649668	D	residues 1 to 106 of 106 are 100.00 pct identical to residues 1 to 106 of 106 from Escherichia coli K-12 : B2540; 3-phenylpropionate dioxygenase ferredoxin subunit	2649348..2649668	Shigella flexneri 2a str. 2457T	1079026
NP_838102.1	CDS	hcaB	NC_004741.1	2649665	2650477	D	Converts cis-3-(3-carboxyethyl)-3,5-cyclohexadiene-1,2-diol (PP-dihydrodiol) into 3-(2,3-dihydroxylphenyl)propionate; 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase	2649665..2650477	Shigella flexneri 2a str. 2457T	1079027
NP_838103.1	CDS	yphA	NC_004741.1	2651734	2652228	D	residues 1 to 164 of 164 are 89.63 pct identical to residues 1 to 164 of 164 from Escherichia coli K-12 : B2543; hypothetical protein	2651734..2652228	Shigella flexneri 2a str. 2457T	1079028
NP_838104.1	CDS	yphB	NC_004741.1	2652276	2653148	R	residues 1 to 290 of 290 are 99.31 pct identical to residues 1 to 290 of 290 from Escherichia coli K-12 : B2544; hypothetical protein	complement(2652276..2653148)	Shigella flexneri 2a str. 2457T	1079029
NP_838105.1	CDS	yphC	NC_004741.1	2653160	2654254	R	residues 1 to 364 of 364 are 94.23 pct identical to residues 1 to 364 of 364 from Escherichia coli K-12 : B2545; oxidoreductase	complement(2653160..2654254)	Shigella flexneri 2a str. 2457T	1078221
NP_838106.1	CDS	yphD	NC_004741.1	2654287	2655285	R	residues 1 to 332 of 332 are 75.30 pct identical to residues 1 to 332 of 332 from Escherichia coli K-12 : B2546; transport system permease	complement(2654287..2655285)	Shigella flexneri 2a str. 2457T	1079031
NP_838107.1	CDS	yphE	NC_004741.1	2655310	2656821	R	residues 1 to 503 of 503 are 99.00 pct identical to residues 1 to 503 of 503 from Escherichia coli K-12 : B2547; ATP-binding component of a transport system	complement(2655310..2656821)	Shigella flexneri 2a str. 2457T	1079032
NP_838108.1	CDS	yphH	NC_004741.1	2661322	2662515	D	residues 1 to 397 of 397 are 98.48 pct identical to residues 3 to 399 of 399 from Escherichia coli K-12 : B2550; NAGC-like transcriptional regulator	2661322..2662515	Shigella flexneri 2a str. 2457T	1079034
NP_838109.1	CDS	glyA	NC_004741.1	2662713	2663966	R	catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase	complement(2662713..2663966)	Shigella flexneri 2a str. 2457T	1079037
NP_838110.1	CDS	hmpA	NC_004741.1	2664293	2665483	D	flavohemoprotein; catalyzes the formation of nitrate from nitric oxide; can also catalyze the reduction of dihydropteridine; nitric oxide dioxygenase	2664293..2665483	Shigella flexneri 2a str. 2457T	1079038
NP_838111.1	CDS	glnB	NC_004741.1	2665528	2665866	R	indirectly regulates nitrogen metabolism; at high nitrogen levels P-II prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA); at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA; nitrogen regulatory protein P-II 1	complement(2665528..2665866)	Shigella flexneri 2a str. 2457T	1079039
NP_838112.1	CDS	yfhA	NC_004741.1	2665927	2667261	R	residues 1 to 444 of 444 are 95.49 pct identical to residues 1 to 444 of 444 from Escherichia coli K-12 : B2554; 2-component transcriptional regulator	complement(2665927..2667261)	Shigella flexneri 2a str. 2457T	1076483
NP_838113.1	CDS	yfhG	NC_004741.1	2667251	2667964	R	residues 1 to 237 of 237 are 84.38 pct identical to residues 1 to 237 of 237 from Escherichia coli K-12 : B2555; hypothetical protein	complement(2667251..2667964)	Shigella flexneri 2a str. 2457T	1079041
NP_838114.1	CDS	yfhK	NC_004741.1	2668129	2669619	R	residues 1 to 488 of 488 are 87.90 pct identical to residues 9 to 496 of 496 from Escherichia coli K-12 : B2556; 2-component sensor protein	complement(2668129..2669619)	Shigella flexneri 2a str. 2457T	1079042
NP_838115.1	CDS	purL	NC_004741.1	2670114	2674001	R	catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase	complement(2670114..2674001)	Shigella flexneri 2a str. 2457T	1079043
NP_838116.1	CDS	yfhD	NC_004741.1	2674398	2675816	D	YfhD; uncharacterized member of the transglycosylase slt family; part of the rob operon, which plays a role in cellular resistance to antibiotics, bactericidal agents, and organic solvents; unknown function; transglycosylase	2674398..2675816	Shigella flexneri 2a str. 2457T	1079044
NP_838117.1	CDS	yfhC	NC_004741.1	2675813	2676349	R	residues 1 to 178 of 178 are 100.00 pct identical to residues 1 to 178 of 178 from Escherichia coli K-12 : B2559; tRNA-specific adenosine deaminase	complement(2675813..2676349)	Shigella flexneri 2a str. 2457T	1079045
NP_838118.2	CDS	yfhB	NC_004741.1	2676374	2677009	R	residues 1 to 190 of 190 are 89.47 pct identical to residues 1 to 190 of 190 from Escherichia coli K-12 : B2560; hypothetical protein	complement(2676374..2677009)	Shigella flexneri 2a str. 2457T	1079046
NP_838119.2	CDS	yfhH	NC_004741.1	2677218	2678066	D	residues 1 to 306 of 306 are 95.75 pct identical to residues 1 to 306 of 306 from Escherichia coli K-12 : B2561; DNA-binding transcriptional regulator	2677218..2678066	Shigella flexneri 2a str. 2457T	1079048
NP_838120.1	CDS	S2781	NC_004741.1	2678519	2678959	R	residues 1 to 146 of 146 are 89.72 pct identical to residues 1 to 146 of 184 from GenPept : >gb|AAC74242.1| (AE000214) inversion of adjacent DNA; at locus of e14 element [Escherichia coli K12]; DNA-invertase	complement(2678519..2678959)	Shigella flexneri 2a str. 2457T	1079050
NP_838121.1	CDS	ipaH_7	NC_004741.1	2679457	2681283	D	residues 1 to 608 of 608 are 63.54 pct identical to residues 1 to 565 of 565 from NRprotein_Feb03 : >ref|NP_085238.1| invasion plasmid antigen [Shigella flexneri] emb|CAC05787.1| IpaH7.8, member of the IpaH family, secreted by the Mxi-Spa secretion machinery, function unknown [Shigella flexneri]; invasion plasmid antigen	2679457..2681283	Shigella flexneri 2a str. 2457T	1079051
NP_838122.1	CDS	S2783	NC_004741.1	2681284	2681829	R	residues 5 to 146 of 181 are 60.56 pct identical to residues 24 to 165 of 188 from GenPept : >emb|CAC83575.1| (AJ298298) hypothetical protein [Bacteriophage P27]; hypothetical protein	complement(2681284..2681829)	Shigella flexneri 2a str. 2457T	1079052
NP_838123.1	CDS	S2784	NC_004741.1	2681874	2683163	R	residues 1 to 420 of 429 are 36.74 pct identical to residues 1 to 488 of 490 from GenPept : >emb|CAC83574.1| (AJ298298)  tail fiber protein [Bacteriophage P27]; tail fiber protein	complement(2681874..2683163)	Shigella flexneri 2a str. 2457T	1079053
NP_838124.1	CDS	S2785	NC_004741.1	2683187	2683675	R	residues 9 to 162 of 162 are 75.97 pct identical to residues 29 to 182 of 182 from GenPept : >emb|CAC83573.1| (AJ298298)  tail fiber assembly protein [Bacteriophage P27]; tail fiber assembly protein	complement(2683187..2683675)	Shigella flexneri 2a str. 2457T	1079054
NP_838125.1	CDS	S2786	NC_004741.1	2683735	2683845	R	residues 3 to 36 of 36 are 76.47 pct identical to residues 525 to 558 of 558 from GenPept : >dbj|BAA00552.1| (D00660) Bcv gene product [Shigella boydii]; tail fiber protein	complement(2683735..2683845)	Shigella flexneri 2a str. 2457T	1079056
NP_838126.2	CDS	S2787	NC_004741.1	2684317	2684682	D	IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats; insertion sequence 2 OrfA protein	2684317..2684682	Shigella flexneri 2a str. 2457T	1079057
NP_838127.2	CDS	S2788	NC_004741.1	2684640	2685545	D	IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats; insertion element IS2 transposase InsD	2684640..2685545	Shigella flexneri 2a str. 2457T	1079938
NP_838128.1	CDS	S2789	NC_004741.1	2685470	2686456	R	residues 145 to 301 of 328 are 80.89 pct identical to residues 86 to 242 of 332 from GenPept : >emb|CAC83572.1| (AJ298298)  tail fiber protein [Bacteriophage P27]; tail fiber protein	complement(2685470..2686456)	Shigella flexneri 2a str. 2457T	1079058
NP_838129.1	CDS	S2790	NC_004741.1	2686443	2687048	R	no significant similarities; hypothetical protein	complement(2686443..2687048)	Shigella flexneri 2a str. 2457T	1079059
NP_838130.1	CDS	S2791	NC_004741.1	2687050	2687517	R	no significant similarities; bacteriophage protein	complement(2687050..2687517)	Shigella flexneri 2a str. 2457T	1079060
NP_838131.1	CDS	S2793	NC_004741.1	2687812	2688114	D	residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAF09029.1| (AF139596) unknown [Shigella flexneri]; IS600 orfA	2687812..2688114	Shigella flexneri 2a str. 2457T	1079061
NP_838132.1	CDS	S2794	NC_004741.1	2688255	2688968	D	residues 1 to 237 of 237 are 90.71 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAK18576.1|AF348706_265 (AF348706) IS600 orfB [Shigella flexneri]; IS600 orfB	2688255..2688968	Shigella flexneri 2a str. 2457T	1079062
NP_838133.1	CDS	S2795	NC_004741.1	2689009	2689665	R	no significant similarities; hypothetical protein	complement(2689009..2689665)	Shigella flexneri 2a str. 2457T	1079063
NP_838134.1	CDS	S2796	NC_004741.1	2689707	2690108	R	no significant similarities; hypothetical protein	complement(2689707..2690108)	Shigella flexneri 2a str. 2457T	1079064
NP_838135.1	CDS	yfhL	NC_004741.1	2690323	2690583	D	residues 1 to 86 of 86 are 97.67 pct identical to residues 1 to 86 of 86 from Escherichia coli K-12 : B2562; hypothetical protein	2690323..2690583	Shigella flexneri 2a str. 2457T	1079937
NP_838136.1	CDS	acpS	NC_004741.1	2691277	2691657	R	Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase	complement(2691277..2691657)	Shigella flexneri 2a str. 2457T	1079065
NP_838137.1	CDS	pdxJ	NC_004741.1	2691657	2692388	R	involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase	complement(2691657..2692388)	Shigella flexneri 2a str. 2457T	1079066
NP_838138.1	CDS	recO	NC_004741.1	2692400	2693128	R	involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO	complement(2692400..2693128)	Shigella flexneri 2a str. 2457T	1079067
NP_838139.1	CDS	era	NC_004741.1	2693140	2694045	R	Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era	complement(2693140..2694045)	Shigella flexneri 2a str. 2457T	1079068
NP_838140.1	CDS	rnc	NC_004741.1	2694042	2694722	R	cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III	complement(2694042..2694722)	Shigella flexneri 2a str. 2457T	1080503
NP_838141.1	CDS	lepB	NC_004741.1	2694994	2695968	R	catalyzes the cleavage of the amino-terminal leader peptide from secretory proteins; signal peptidase I	complement(2694994..2695968)	Shigella flexneri 2a str. 2457T	1079069
NP_838142.1	CDS	lepA	NC_004741.1	2695984	2697783	R	binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA	complement(2695984..2697783)	Shigella flexneri 2a str. 2457T	1079070
NP_838143.1	CDS	rseC	NC_004741.1	2697981	2698460	R	involved in the reduction of the SoxR iron-sulfur cluster; SoxR reducing system protein RseC	complement(2697981..2698460)	Shigella flexneri 2a str. 2457T	1079071
NP_838144.1	CDS	rseB	NC_004741.1	2698457	2699413	R	periplasmic protein; interacts with the C-terminal domain of RseA and stimulates RseA binding to sigmaE via the cytoplasmic RseA N-terminal domain which then sequesters sigmaE in the membrane thereby preventing sigmaE associated with core RNAP; periplasmic negative regulator of sigmaE	complement(2698457..2699413)	Shigella flexneri 2a str. 2457T	1079072
NP_838145.1	CDS	rseA	NC_004741.1	2699413	2700063	R	residues 1 to 216 of 216 are 87.50 pct identical to residues 1 to 216 of 216 from Escherichia coli K-12 : B2572; anti-RNA polymerase sigma factor SigE	complement(2699413..2700063)	Shigella flexneri 2a str. 2457T	1078127
NP_838146.1	CDS	rpoE	NC_004741.1	2700096	2700671	R	Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; RNA polymerase sigma factor RpoE	complement(2700096..2700671)	Shigella flexneri 2a str. 2457T	1079073
NP_838147.1	CDS	yfiC	NC_004741.1	2702686	2703543	R	residues 1 to 285 of 285 are 89.82 pct identical to residues 1 to 285 of 285 from Escherichia coli K-12 : B2575; enzyme	complement(2702686..2703543)	Shigella flexneri 2a str. 2457T	1079075
NP_838148.1	CDS	srmB	NC_004741.1	2703555	2704889	D	facilitates an early step in the assembly of the 50S subunit of the ribosome; ATP-dependent RNA helicase SrmB	2703555..2704889	Shigella flexneri 2a str. 2457T	1079076
NP_838149.1	CDS	yfiE	NC_004741.1	2704924	2705850	R	residues 1 to 306 of 308 are 97.05 pct identical to residues 1 to 306 of 308 from Escherichia coli K-12 : B2577; LYSR-type transcriptional regulator	complement(2704924..2705850)	Shigella flexneri 2a str. 2457T	1079077
NP_838150.1	CDS	yfiK	NC_004741.1	2705908	2706495	D	residues 1 to 195 of 195 are 99.48 pct identical to residues 1 to 195 of 195 from Escherichia coli K-12 : B2578; neutral amino-acid efflux protein	2705908..2706495	Shigella flexneri 2a str. 2457T	1078810
NP_838151.1	CDS	yfiD	NC_004741.1	2706551	2706934	R	stress-induced glycyl radical protein that can replace an oxidatively damaged pyruvate formate-lyase subunit; autonomous glycyl radical cofactor GrcA	complement(2706551..2706934)	Shigella flexneri 2a str. 2457T	1079078
NP_838152.1	CDS	ung	NC_004741.1	2707239	2707928	D	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase	2707239..2707928	Shigella flexneri 2a str. 2457T	1079079
NP_838153.1	CDS	yfiF	NC_004741.1	2707976	2709013	R	residues 1 to 345 of 345 are 92.75 pct identical to residues 1 to 345 of 345 from Escherichia coli K-12 : B2581; methyltransferase	complement(2707976..2709013)	Shigella flexneri 2a str. 2457T	1079080
NP_838154.1	CDS	trxC	NC_004741.1	2709220	2709639	D	residues 1 to 139 of 139 are 93.52 pct identical to residues 1 to 139 of 139 from Escherichia coli K-12 : B2582; thioredoxin 2	2709220..2709639	Shigella flexneri 2a str. 2457T	1079081
NP_838155.1	CDS	yfiP	NC_004741.1	2709684	2710406	D	residues 1 to 240 of 240 are 99.16 pct identical to residues 1 to 240 of 240 from Escherichia coli K-12 : B2583; hypothetical protein	2709684..2710406	Shigella flexneri 2a str. 2457T	1079082
NP_838156.1	CDS	yfiQ	NC_004741.1	2710438	2713098	D	residues 1 to 886 of 886 are 95.59 pct identical to residues 1 to 886 of 886 from Escherichia coli K-12 : B2584; hypothetical protein	2710438..2713098	Shigella flexneri 2a str. 2457T	1079083
NP_838157.1	CDS	pssA	NC_004741.1	2713212	2714567	D	catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine; bounds to the ribosome; phosphatidylserine synthase	2713212..2714567	Shigella flexneri 2a str. 2457T	1079084
NP_838158.1	CDS	yfiM	NC_004741.1	2714664	2714936	D	residues 1 to 90 of 90 are 97.77 pct identical to residues 1 to 90 of 90 from Escherichia coli K-12 : B2586; hypothetical protein	2714664..2714936	Shigella flexneri 2a str. 2457T	1079085
NP_838159.1	CDS	kgtP	NC_004741.1	2714933	2716231	R	residues 1 to 432 of 432 are 92.36 pct identical to residues 1 to 432 of 432 from Escherichia coli K-12 : B2587; alpha-ketoglutarate transporter	complement(2714933..2716231)	Shigella flexneri 2a str. 2457T	1079086
NP_838160.1	CDS	S2827	NC_004741.1	2722081	2723409	D	residues 1 to 442 of 442 are 99.77 pct identical to residues 7 to 448 of 448 from GenPept : >gb|AAK18333.1|AF348706_22 (AF348706) IS4 orf [Shigella flexneri]; IS4 orf	2722081..2723409	Shigella flexneri 2a str. 2457T	1079091
NP_838161.1	CDS	S2828	NC_004741.1	2723460	2724197	R	with YaeT, NlpB and YfgL forms a complex involved in the proper assembly and/or targeting of OMPs to the outer membrane; involved in resistance to ampicillin and tetracycline; outer membrane protein assembly complex subunit YfiO	complement(2723460..2724197)	Shigella flexneri 2a str. 2457T	1079092
NP_838162.1	CDS	rluD	NC_004741.1	2724332	2725312	D	responsible for synthesis of pseudouridine from uracil at positions 1911, 1915 and 1917 in 23S ribosomal RNA; 23S rRNA pseudouridine synthase D	2724332..2725312	Shigella flexneri 2a str. 2457T	1079093
NP_838163.1	CDS	yfiH	NC_004741.1	2725309	2726040	D	residues 1 to 243 of 243 are 98.35 pct identical to residues 1 to 243 of 243 from Escherichia coli K-12 : B2593; hypothetical protein	2725309..2726040	Shigella flexneri 2a str. 2457T	1079094
NP_838164.1	CDS	clpB	NC_004741.1	2726170	2728743	D	residues 1 to 857 of 857 are 95.44 pct identical to residues 1 to 857 of 857 from Escherichia coli K-12 : B2592; protein disaggregation chaperone	2726170..2728743	Shigella flexneri 2a str. 2457T	1079095
NP_838165.1	CDS	S2832	NC_004741.1	2728780	2729790	R	residues 1 to 336 of 336 are 99.40 pct identical to residues 113 to 448 of 448 from GenPept : >gb|AAK18333.1|AF348706_22 (AF348706) IS4 orf [Shigella flexneri]; partial; IS4 orf	complement(2728780..2729790)	Shigella flexneri 2a str. 2457T	1079096
NP_838166.1	CDS	S2833	NC_004741.1	2729727	2730107	R	residues 1 to 126 of 126 are 100.00 pct identical to residues 7 to 132 of 132 from GenPept : >gb|AAL72522.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; partial; IS4 orf	complement(2729727..2730107)	Shigella flexneri 2a str. 2457T	1079097
NP_838167.1	CDS	S2834	NC_004741.1	2730198	2730404	D	residues 1 to 68 of 68 are 94.11 pct identical to residues 1 to 68 of 68 from Escherichia coli K-12 : B2596; hypothetical protein	2730198..2730404	Shigella flexneri 2a str. 2457T	1079098
NP_838168.1	CDS	yfiA	NC_004741.1	2730439	2730780	D	associated with 30S ribosomal subunit; interferes with translation elongation; translation inhibitor protein RaiA	2730439..2730780	Shigella flexneri 2a str. 2457T	1079099
NP_838170.1	CDS	pheA	NC_004741.1	2731030	2732190	D	catalyzing the formation of prephenate from chorismate and the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis; bifunctional chorismate mutase/prephenate dehydratase	2731030..2732190	Shigella flexneri 2a str. 2457T	1079101
NP_838171.1	CDS	tyrA	NC_004741.1	2732233	2733354	R	catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis; bifunctional chorismate mutase/prephenate dehydrogenase	complement(2732233..2733354)	Shigella flexneri 2a str. 2457T	1079102
NP_838172.1	CDS	aroF	NC_004741.1	2733365	2734435	R	catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, tyrosine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase	complement(2733365..2734435)	Shigella flexneri 2a str. 2457T	1079103
NP_838173.1	CDS	yfiL	NC_004741.1	2734645	2735010	D	residues 1 to 121 of 121 are 99.17 pct identical to residues 14 to 134 of 134 from Escherichia coli K-12 : B2602; hypothetical protein	2734645..2735010	Shigella flexneri 2a str. 2457T	1079104
NP_838174.1	CDS	S2840	NC_004741.1	2735160	2735678	D	residues 1 to 172 of 172 are 94.18 pct identical to residues 1 to 172 of 172 from Escherichia coli K-12 : B2603; hypothetical protein	2735160..2735678	Shigella flexneri 2a str. 2457T	1079105
NP_838175.1	CDS	yfiB	NC_004741.1	2736909	2737391	D	residues 1 to 160 of 160 are 98.75 pct identical to residues 1 to 160 of 160 from Escherichia coli K-12 : B2605; outer membrane lipoprotein	2736909..2737391	Shigella flexneri 2a str. 2457T	1079107
NP_838176.1	CDS	rplS	NC_004741.1	2737468	2737815	R	this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19	complement(2737468..2737815)	Shigella flexneri 2a str. 2457T	1079108
NP_838177.1	CDS	trmD	NC_004741.1	2737857	2738624	R	methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase	complement(2737857..2738624)	Shigella flexneri 2a str. 2457T	1079109
NP_838178.1	CDS	rimM	NC_004741.1	2738655	2739203	R	Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM	complement(2738655..2739203)	Shigella flexneri 2a str. 2457T	1079110
NP_838179.1	CDS	rpsP	NC_004741.1	2739222	2739470	R	binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16	complement(2739222..2739470)	Shigella flexneri 2a str. 2457T	1079111
NP_838180.1	CDS	ffh	NC_004741.1	2739607	2740968	R	with 4.5S RNA forms a signal recognition particle involved in targeting and integration of inner membrane proteins; signal recognition particle protein	complement(2739607..2740968)	Shigella flexneri 2a str. 2457T	1079112
NP_838181.1	CDS	S2848	NC_004741.1	2741060	2741926	D	residues 1 to 288 of 288 are 79.16 pct identical to residues 1 to 288 of 288 from Escherichia coli K-12 : B2611; hypothetical protein	2741060..2741926	Shigella flexneri 2a str. 2457T	1079113
NP_838182.1	CDS	yfjD	NC_004741.1	2742550	2743233	D	residues 1 to 227 of 227 are 99.55 pct identical to residues 1 to 227 of 227 from Escherichia coli K-12 : B2613; transporter	2742550..2743233	Shigella flexneri 2a str. 2457T	1079115
NP_838183.1	CDS	grpE	NC_004741.1	2743288	2743881	R	with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE	complement(2743288..2743881)	Shigella flexneri 2a str. 2457T	1079116
NP_838184.1	CDS	ppnK	NC_004741.1	2744004	2744882	D	catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase	2744004..2744882	Shigella flexneri 2a str. 2457T	1079117
NP_838185.1	CDS	recN	NC_004741.1	2744968	2746629	D	residues 1 to 553 of 553 are 95.47 pct identical to residues 1 to 553 of 553 from Escherichia coli K-12 : B2616; recombination and repair protein	2744968..2746629	Shigella flexneri 2a str. 2457T	1079118
NP_838186.1	CDS	smpA	NC_004741.1	2746967	2747119	D	residues 1 to 50 of 50 are 100.00 pct identical to residues 1 to 50 of 50 from Escherichia coli K-12 : B2617; small membrane protein A	2746967..2747119	Shigella flexneri 2a str. 2457T	1079119
NP_838187.1	CDS	S2855	NC_004741.1	2747181	2747471	R	residues 3 to 96 of 96 are 100.00 pct identical to residues 9 to 102 of 102 from Escherichia coli K-12 : B2618; hypothetical protein	complement(2747181..2747471)	Shigella flexneri 2a str. 2457T	1079120
NP_838188.1	CDS	S2856	NC_004741.1	2747461	2747898	R	residues 1 to 145 of 145 are 100.00 pct identical to residues 14 to 158 of 158 from Escherichia coli K-12 : B2619; hypothetical protein	complement(2747461..2747898)	Shigella flexneri 2a str. 2457T	1079121
NP_838189.1	CDS	smpB	NC_004741.1	2748069	2748551	D	binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein	2748069..2748551	Shigella flexneri 2a str. 2457T	1079122
NP_838190.1	CDS	S2859	NC_004741.1	2749333	2750574	D	CP4-57 prophage; integrase; integrase	2749333..2750574	Shigella flexneri 2a str. 2457T	1079124
NP_838191.1	CDS	S2860	NC_004741.1	2750774	2751073	D	residues 1 to 90 of 99 are 98.88 pct identical to residues 1 to 90 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	2750774..2751073	Shigella flexneri 2a str. 2457T	1079125
NP_838192.1	CDS	S2861	NC_004741.1	2751589	2751888	D	residues 1 to 99 of 99 are 100.00 pct identical to residues 1 to 99 of 99 from GenPept : >gb|AAL57580.1|AF453442_9 (AF453442) transposase 2 [Escherichia coli]; IS3 orfA	2751589..2751888	Shigella flexneri 2a str. 2457T	1079126
NP_838193.1	CDS	S2862	NC_004741.1	2751885	2752313	D	residues 1 to 133 of 142 are 94.73 pct identical to residues 1 to 133 of 288 from GenPept : >gb|AAL57581.1|AF453442_10 (AF453442) transposase 1 [Escherichia coli]; partial; IS3 orfB	2751885..2752313	Shigella flexneri 2a str. 2457T	1079127
NP_838194.1	CDS	S2863	NC_004741.1	2752333	2752440	D	residues 1 to 22 of 36 are 100 pct identical to residues 167 to 188 of 305 from GenPept : >gb|CAB37974.1|X02311 (AF453442) hypothetical protein of IS3 [Escherichia coli]; partial; IS3 orfB	2752333..2752440	Shigella flexneri 2a str. 2457T	1079128
NP_838196.1	CDS	S2870	NC_004741.1	2755617	2755889	D	residues 1 to 90 of 90 are 96.66 pct identical to residues 1 to 90 of 90 from Escherichia coli K-12 : B2658; hypothetical protein	2755617..2755889	Shigella flexneri 2a str. 2457T	1079135
NP_838197.2	CDS	S2871	NC_004741.1	2756225	2757157	D	in Escherichia coli this gene is induced by carbon starvation and depends on sigma S and cAMP-CRP; the structure of the Gab protein shows it is a member of non-heme iron (II)-dependent oxygenase superfamily which includes clavamini acid synthases; forms homotetramers in solution; hypothetical protein	2756225..2757157	Shigella flexneri 2a str. 2457T	1079136
NP_838198.1	CDS	ygaF	NC_004741.1	2757111	2758445	D	catalyzed the formation of 2-ketoglutarate from 2-hydroxyglutarate; hydroxyglutarate oxidase	2757111..2758445	Shigella flexneri 2a str. 2457T	1079137
NP_838199.1	CDS	gabT	NC_004741.1	2760083	2761210	D	catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; 4-aminobutyrate aminotransferase	2760083..2761210	Shigella flexneri 2a str. 2457T	1079139
NP_838200.1	CDS	gabP	NC_004741.1	2761448	2762848	D	residues 1 to 466 of 466 are 99.35 pct identical to residues 1 to 466 of 466 from Escherichia coli K-12 : B2663; gamma-aminobutyrate transporter	2761448..2762848	Shigella flexneri 2a str. 2457T	1079140
NP_838201.1	CDS	ygaE	NC_004741.1	2762869	2763531	D	regulator of gab gene expression; DNA-binding transcriptional regulator CsiR	2762869..2763531	Shigella flexneri 2a str. 2457T	1079141
NP_838202.1	CDS	ygaU	NC_004741.1	2763532	2763981	R	residues 1 to 149 of 149 are 99.32 pct identical to residues 1 to 149 of 149 from Escherichia coli K-12 : B2665; LysM domain/BON superfamily protein	complement(2763532..2763981)	Shigella flexneri 2a str. 2457T	1079142
NP_838203.1	CDS	S2878	NC_004741.1	2764065	2764223	R	residues 1 to 52 of 52 are 98.07 pct identical to residues 1 to 52 of 52 from Escherichia coli K-12 : B2666; hypothetical protein	complement(2764065..2764223)	Shigella flexneri 2a str. 2457T	1079143
NP_838204.2	CDS	S2879	NC_004741.1	2764324	2765229	R	IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats; insertion element IS2 transposase InsD	complement(2764324..2765229)	Shigella flexneri 2a str. 2457T	1079144
NP_838205.2	CDS	S2880	NC_004741.1	2765187	2765552	R	IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats; insertion sequence 2 OrfA protein	complement(2765187..2765552)	Shigella flexneri 2a str. 2457T	1079145
NP_838206.1	CDS	S2881	NC_004741.1	2765742	2766041	D	residues 1 to 99 of 99 are 97.97 pct identical to residues 1 to 99 of 99 from Escherichia coli K-12 : B2667; hypothetical protein	2765742..2766041	Shigella flexneri 2a str. 2457T	1079146
NP_838207.1	CDS	ygaP	NC_004741.1	2766051	2766575	D	residues 1 to 174 of 174 are 97.70 pct identical to residues 1 to 174 of 174 from Escherichia coli K-12 : B2668; hypothetical protein	2766051..2766575	Shigella flexneri 2a str. 2457T	1079147
NP_838208.1	CDS	stpA	NC_004741.1	2766622	2767026	R	residues 1 to 134 of 134 are 86.56 pct identical to residues 1 to 134 of 134 from Escherichia coli K-12 : B2669; DNA binding protein, nucleoid-associated	complement(2766622..2767026)	Shigella flexneri 2a str. 2457T	1079148
NP_838209.1	CDS	S2884	NC_004741.1	2767694	2768143	D	residues 1 to 149 of 149 are 100.00 pct identical to residues 1 to 149 of 149 from Escherichia coli K-12 : B2670; hypothetical protein	2767694..2768143	Shigella flexneri 2a str. 2457T	1079149
NP_838210.1	CDS	ygaC	NC_004741.1	2768180	2768524	R	residues 1 to 114 of 114 are 100.00 pct identical to residues 1 to 114 of 114 from Escherichia coli K-12 : B2671; hypothetical protein	complement(2768180..2768524)	Shigella flexneri 2a str. 2457T	1079150
NP_838211.1	CDS	nrdH	NC_004741.1	2769253	2769498	D	residues 1 to 81 of 81 are 100.00 pct identical to residues 1 to 81 of 81 from Escherichia coli K-12 : B2673; hydrogen donor; glutaredoxin-like protein	2769253..2769498	Shigella flexneri 2a str. 2457T	1079152
NP_838212.1	CDS	nrdI	NC_004741.1	2769495	2769905	D	in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF; ribonucleotide reductase stimulatory protein	2769495..2769905	Shigella flexneri 2a str. 2457T	1079153
NP_838213.1	CDS	nrdE	NC_004741.1	2769917	2772022	D	Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha	2769917..2772022	Shigella flexneri 2a str. 2457T	1079154
NP_838214.1	CDS	nrdF	NC_004741.1	2772032	2772991	D	B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE; ribonucleotide-diphosphate reductase subunit beta	2772032..2772991	Shigella flexneri 2a str. 2457T	1079155
NP_838215.1	CDS	proV	NC_004741.1	2773346	2774548	D	with ProWX is involved in the high-affinity uptake of glycine betaine; glycine betaine transporter ATP-binding subunit	2773346..2774548	Shigella flexneri 2a str. 2457T	1079156
NP_838216.1	CDS	proW	NC_004741.1	2774541	2775605	D	with ProVX is involved in the high-affinity uptake of glycine betaine; glycine betaine transporter membrane protein	2774541..2775605	Shigella flexneri 2a str. 2457T	1079157
NP_838217.1	CDS	proX	NC_004741.1	2775663	2776655	D	with ProVW, part of the high-affinity transport system for the osmoprotectant glycine betaine; glycine betaine transporter periplasmic subunit	2775663..2776655	Shigella flexneri 2a str. 2457T	1079158
NP_838218.1	CDS	S2894	NC_004741.1	2776847	2777806	D	residues 1 to 87 of 310 are 100.00 pct identical to residues 1 to 87 of 88 from Escherichia coli K-12 : B2680; hypothetical protein	2776847..2777806	Shigella flexneri 2a str. 2457T	1079160
NP_838219.1	CDS	S2896	NC_004741.1	2778150	2778887	D	residues 1 to 245 of 245 are 93.46 pct identical to residues 1 to 245 of 245 from Escherichia coli K-12 : B2682; hypothetical protein	2778150..2778887	Shigella flexneri 2a str. 2457T	1079161
NP_838220.1	CDS	ygaH	NC_004741.1	2778877	2779212	D	residues 1 to 111 of 111 are 90.09 pct identical to residues 1 to 111 of 111 from Escherichia coli K-12 : B2683; hypothetical protein	2778877..2779212	Shigella flexneri 2a str. 2457T	1079162
NP_838221.1	CDS	emrR	NC_004741.1	2779303	2779833	D	DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux; negative regulator of the multidrug operon emrAB; transcriptional repressor MprA	2779303..2779833	Shigella flexneri 2a str. 2457T	1079163
NP_838222.1	CDS	emrB	NC_004741.1	2781149	2782687	D	residues 1 to 512 of 512 are 91.99 pct identical to residues 1 to 512 of 512 from Escherichia coli K-12 : B2686; multidrug resistant protein emrB	2781149..2782687	Shigella flexneri 2a str. 2457T	1079165
NP_838223.1	CDS	ygaG	NC_004741.1	2782751	2783266	R	catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2; S-ribosylhomocysteinase	complement(2782751..2783266)	Shigella flexneri 2a str. 2457T	1079166
NP_838224.1	CDS	gshA	NC_004741.1	2783416	2784972	R	involved in the first step of glutathione biosynthesis; glutamate--cysteine ligase	complement(2783416..2784972)	Shigella flexneri 2a str. 2457T	1079167
NP_838225.1	CDS	S2903	NC_004741.1	2785045	2785473	R	residues 22 to 142 of 142 are 100.00 pct identical to residues 22 to 142 of 142 from Escherichia coli K-12 : B2689; hypothetical protein	complement(2785045..2785473)	Shigella flexneri 2a str. 2457T	1079168
NP_838226.1	CDS	yqaB	NC_004741.1	2785470	2786036	R	YqaB; catalyzes the dephosphorylation of fructose 1-phosphate, 6-phosphogluconate and p-nitrophenyl phosphate (pNPP); presents beta-phosphoglucomutase activity at a lower extent; fructose-1-phosphatase	complement(2785470..2786036)	Shigella flexneri 2a str. 2457T	1079169
NP_838227.1	CDS	csrA	NC_004741.1	2787095	2787280	R	affects carbohydrate metabolism; has regulatory role in many processes; carbon storage regulator	complement(2787095..2787280)	Shigella flexneri 2a str. 2457T	1079175
NP_838228.1	CDS	alaS	NC_004741.1	2787515	2790145	R	Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase	complement(2787515..2790145)	Shigella flexneri 2a str. 2457T	1079176
NP_838229.1	CDS	recX	NC_004741.1	2790273	2790773	R	binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; recombination regulator RecX	complement(2790273..2790773)	Shigella flexneri 2a str. 2457T	1079177
NP_838230.1	CDS	recA	NC_004741.1	2791016	2792077	R	catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A	complement(2791016..2792077)	Shigella flexneri 2a str. 2457T	1079178
NP_838231.1	CDS	ygaD	NC_004741.1	2792157	2792654	R	residues 1 to 165 of 165 are 100.00 pct identical to residues 1 to 165 of 165 from Escherichia coli K-12 : B2700; competence damage-inducible protein A	complement(2792157..2792654)	Shigella flexneri 2a str. 2457T	1079179
NP_838232.1	CDS	mltB	NC_004741.1	2792799	2793884	R	membrane-bound lytic murein transglycosylase B; catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine in peptidoglycan; murein hydrolase B	complement(2792799..2793884)	Shigella flexneri 2a str. 2457T	1079180
NP_838233.1	CDS	srlE	NC_004741.1	2794700	2795659	D	residues 1 to 319 of 319 are 92.47 pct identical to residues 1 to 319 of 319 from Escherichia coli K-12 : B2703; PTS system, glucitol/sorbitol-specific IIB component and second of two IIC components	2794700..2795659	Shigella flexneri 2a str. 2457T	1079182
NP_838234.1	CDS	srlB	NC_004741.1	2795670	2796041	D	phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; glucitol/sorbitol-specific PTS system component IIA	2795670..2796041	Shigella flexneri 2a str. 2457T	1079183
NP_838235.1	CDS	srlD	NC_004741.1	2796045	2796824	D	catalyzes the conversion of sorbitol 6-phosphate into fructose 6-phosphate; sorbitol-6-phosphate dehydrogenase	2796045..2796824	Shigella flexneri 2a str. 2457T	1079184
NP_838236.1	CDS	gutM	NC_004741.1	2796929	2797288	D	regulator for glucitol utilization; DNA-binding transcriptional activator GutM	2796929..2797288	Shigella flexneri 2a str. 2457T	1079185
NP_838237.1	CDS	srlR	NC_004741.1	2797355	2798128	D	regulates genes involved in glucitol utilization; DNA-bindng transcriptional repressor SrlR	2797355..2798128	Shigella flexneri 2a str. 2457T	1079186
NP_838238.2	CDS	gutQ	NC_004741.1	2798121	2799086	D	catalyzes the conversion of D-arabinose 5-phosphate to D-ribulose-5-phosphate; D-arabinose 5-phosphate isomerase	2798121..2799086	Shigella flexneri 2a str. 2457T	1079187
NP_838239.2	CDS	ygaA	NC_004741.1	2799083	2800597	R	Required for the expression of anaerobic nitric oxide (NO) reductase; acts as a transcriptional activator for the norVW operon; anaerobic nitric oxide reductase transcriptional regulator	complement(2799083..2800597)	Shigella flexneri 2a str. 2457T	1079188
NP_838240.1	CDS	S2924	NC_004741.1	2800784	2802223	D	detoxifies nitric oxide using NADH; anaerobic nitric oxide reductase flavorubredoxin	2800784..2802223	Shigella flexneri 2a str. 2457T	1079189
NP_838241.1	CDS	ygbD	NC_004741.1	2802220	2803353	D	catalyzes the reduction of the rubredoxin moiety of nitric oxide reductase; nitric oxide reductase	2802220..2803353	Shigella flexneri 2a str. 2457T	1079190
NP_838242.1	CDS	hypF	NC_004741.1	2803481	2805733	R	residues 1 to 750 of 750 are 89.73 pct identical to residues 1 to 750 of 750 from Escherichia coli K-12 : B2712; transcriptional regulatory protein	complement(2803481..2805733)	Shigella flexneri 2a str. 2457T	1079191
NP_838243.1	CDS	hydN	NC_004741.1	2805886	2806413	R	involved in electron transport from formate to hydrogen; electron transport protein HydN	complement(2805886..2806413)	Shigella flexneri 2a str. 2457T	1079192
NP_838244.1	CDS	ascG	NC_004741.1	2806562	2807572	R	residues 1 to 336 of 336 are 97.91 pct identical to residues 2 to 337 of 337 from Escherichia coli K-12 : B2714; ascBF operon repressor	complement(2806562..2807572)	Shigella flexneri 2a str. 2457T	1079193
NP_838245.1	CDS	hycF	NC_004741.1	2807586	2807705	R	residues 1 to 38 of 39 are 62.79 pct identical to residues 1 to 43 of 180 from Escherichia coli K-12 : B2720; iron-sulfur protein of hydrogenase 3 (part of FHL complex)	complement(2807586..2807705)	Shigella flexneri 2a str. 2457T	1079194
NP_838246.1	CDS	hycE	NC_004741.1	2807715	2809424	R	residues 1 to 569 of 569 are 96.83 pct identical to residues 1 to 569 of 569 from Escherichia coli K-12 : B2721; large subunit of hydrogenase 3 (part of FHL complex)	complement(2807715..2809424)	Shigella flexneri 2a str. 2457T	1079195
NP_838247.1	CDS	hycD	NC_004741.1	2809442	2810365	R	residues 1 to 291 of 307 are 91.40 pct identical to residues 1 to 291 of 307 from Escherichia coli K-12 : B2722; membrane-spanning protein of hydrogenase 3 (part of FHL complex)	complement(2809442..2810365)	Shigella flexneri 2a str. 2457T	1079196
NP_838248.1	CDS	hycC	NC_004741.1	2810368	2812161	R	catalyzes the oxidation of formate to carbon dioxide and molecular hydrogen; formate hydrogenlyase comprises of a formate dehydrogenase, unidentified electron carriers and a hydrogenase (subunit 3); formate hydrogenlyase subunit 3	complement(2810368..2812161)	Shigella flexneri 2a str. 2457T	1079197
NP_838249.1	CDS	hycB	NC_004741.1	2812198	2812809	R	residues 1 to 203 of 203 are 91.62 pct identical to residues 1 to 203 of 203 from Escherichia coli K-12 : B2724; small subunit of hydrogenase-3, iron-sulfur protein (part of formate hydrogenlyase (FHL) complex)	complement(2812198..2812809)	Shigella flexneri 2a str. 2457T	1079198
NP_838250.1	CDS	hycA	NC_004741.1	2812934	2813395	R	regulates several genes involved in the formate hydrogenlyase system; seems to prevent binding of FhlA transcriptional activator to the activator sequence of hyc operon; formate hydrogenlyase regulatory protein HycA	complement(2812934..2813395)	Shigella flexneri 2a str. 2457T	1079199
NP_838251.1	CDS	hypA	NC_004741.1	2813595	2813957	D	plays a role in hydrogenase nickel cofactor insertion; hydrogenase nickel incorporation protein	2813595..2813957	Shigella flexneri 2a str. 2457T	1079200
NP_838252.1	CDS	hypB	NC_004741.1	2813961	2814833	D	GTP hydrolase involved in nickel liganding into hydrogenases; hydrogenase nickel incorporation protein HypB	2813961..2814833	Shigella flexneri 2a str. 2457T	1079201
NP_838253.1	CDS	hypC	NC_004741.1	2814824	2815096	D	HypC; accessory protein necessary for maturation of the hydrogenase isoforms 1, 2 and 3; forms a complex with HypD, HypE, and HypF proteins, which is the site of ligand biosynthesis and attachment to the iron atom of the NiFe site in the hydrogenase; hydrogenase assembly chaperone	2814824..2815096	Shigella flexneri 2a str. 2457T	1079202
NP_838254.1	CDS	hypD	NC_004741.1	2815096	2816217	D	residues 1 to 373 of 373 are 99.73 pct identical to residues 1 to 373 of 373 from Escherichia coli K-12 : B2729; pleiotrophic effects on 3 hydrogenase isozymes; hydrogenase isoenzyme HypD	2815096..2816217	Shigella flexneri 2a str. 2457T	1079203
NP_838255.1	CDS	hypE	NC_004741.1	2816256	2817224	D	residues 1 to 322 of 322 are 98.44 pct identical to residues 1 to 322 of 322 from Escherichia coli K-12 : B2730; has structural role in maturation of all 3 hydrogenases; hypE product	2816256..2817224	Shigella flexneri 2a str. 2457T	1079204
NP_838256.1	CDS	fhlA	NC_004741.1	2817298	2819376	D	residues 1 to 692 of 692 are 96.67 pct identical to residues 1 to 692 of 692 from Escherichia coli K-12 : B2731; formate hydrogen-lyase transcriptional activator for fdhF, hyc and hyp operons	2817298..2819376	Shigella flexneri 2a str. 2457T	1079205
NP_838257.1	CDS	ygbA	NC_004741.1	2819413	2819766	R	residues 1 to 117 of 117 are 99.14 pct identical to residues 1 to 117 of 117 from Escherichia coli K-12 : B2732; hypothetical protein	complement(2819413..2819766)	Shigella flexneri 2a str. 2457T	1079206
NP_838258.1	CDS	S2942	NC_004741.1	2819829	2820332	R	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri]; IS1 orfB	complement(2819829..2820332)	Shigella flexneri 2a str. 2457T	1079207
NP_838259.1	CDS	S2943	NC_004741.1	2820251	2820526	R	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(2820251..2820526)	Shigella flexneri 2a str. 2457T	1079208
NP_838260.1	CDS	mutS	NC_004741.1	2820830	2823391	D	This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS	2820830..2823391	Shigella flexneri 2a str. 2457T	1079209
NP_838261.1	CDS	ygbI	NC_004741.1	2824200	2824997	R	residues 1 to 265 of 265 are 98.11 pct identical to residues 1 to 265 of 265 from Escherichia coli K-12 : B2735; DEOR-type transcriptional regulator	complement(2824200..2824997)	Shigella flexneri 2a str. 2457T	1079211
NP_838262.1	CDS	S2949	NC_004741.1	2826353	2826655	D	residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAL72452.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS600 orfA	2826353..2826655	Shigella flexneri 2a str. 2457T	1079214
NP_838263.1	CDS	S2950	NC_004741.1	2826796	2827509	D	residues 1 to 237 of 237 are 91.13 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAB86997.1| (U97492) hypothetical 31 KD protein [Shigella flexneri]; IS600 orfB	2826796..2827509	Shigella flexneri 2a str. 2457T	1079215
NP_838264.1	CDS	S2951	NC_004741.1	2827837	2829933	R	residues 4 to 698 of 698 are 75.10 pct identical to residues 2 to 696 of 696 from GenPept : >dbj|BAB38368.1| (AP002567) phage transposase [Escherichia coli O157:H7]; phage transposase	complement(2827837..2829933)	Shigella flexneri 2a str. 2457T	1079216
NP_838265.1	CDS	S2952	NC_004741.1	2829935	2830186	R	residues 1 to 83 of 83 are 54.21 pct identical to residues 1 to 82 of 82 from GenPept : >dbj|BAB38367.1| (AP002567)  DNA-binding protein [Escherichia coli O157:H7]; DNA-binding protein	complement(2829935..2830186)	Shigella flexneri 2a str. 2457T	1079217
NP_838266.1	CDS	S2953	NC_004741.1	2830351	2830914	D	residues 11 to 184 of 187 are 42.69 pct identical to residues 2 to 175 of 176 from GenPept : >dbj|BAB38366.1| (AP002567)  regulatory protein [Escherichia coli O157:H7]; regulatory protein	2830351..2830914	Shigella flexneri 2a str. 2457T	1079218
NP_838267.1	CDS	yclC	NC_004741.1	2831184	2832134	R	residues 1 to 316 of 316 are 97.15 pct identical to residues 1 to 316 of 475 from GenPept : >gb|AAG57845.1|AE005501_14 (AE005501) orf; hypothetical protein [Escherichia coli O157:H7 EDL933]; 4-hydroxybenzoate decarboxylase	complement(2831184..2832134)	Shigella flexneri 2a str. 2457T	1079219
NP_838268.1	CDS	padI	NC_004741.1	2832134	2832727	R	residues 1 to 197 of 197 are 100.00 pct identical to residues 1 to 197 of 197 from GenPept : >gb|AAG14986.1|AF242210_5 (AF242210) phenylacrylic acid decarboxylase-like protein [Escherichia coli]; phenylacrylic acid decarboxylase-like protein	complement(2832134..2832727)	Shigella flexneri 2a str. 2457T	1079220
NP_838269.1	CDS	S2956	NC_004741.1	2832874	2833281	D	residues 1 to 135 of 135 are 97.03 pct identical to residues 1 to 135 of 135 from GenPept : >gb|AAG14991.1|AF242211_3 (AF242211) transcriptional regulator protein [Escherichia coli]; transcriptional regulator	2832874..2833281	Shigella flexneri 2a str. 2457T	1079221
NP_838270.1	CDS	nlpD	NC_004741.1	2834455	2835594	R	outer membrane lipoprotein involved in stationary-phase cell survival; similar to LppB virulence determinant from Haemophilus somnus; lipoprotein NlpD	complement(2834455..2835594)	Shigella flexneri 2a str. 2457T	1079223
NP_838271.1	CDS	pcm	NC_004741.1	2835734	2836360	R	catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins; protein-L-isoaspartate O-methyltransferase	complement(2835734..2836360)	Shigella flexneri 2a str. 2457T	1079224
NP_838272.1	CDS	surE	NC_004741.1	2836354	2837115	R	catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE	complement(2836354..2837115)	Shigella flexneri 2a str. 2457T	1079225
NP_838273.1	CDS	truD	NC_004741.1	2837096	2838145	R	catalyzes the modification of U13 in tRNA(Glu); tRNA pseudouridine synthase D	complement(2837096..2838145)	Shigella flexneri 2a str. 2457T	1079226
NP_838274.1	CDS	ispF	NC_004741.1	2838142	2838621	R	catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	complement(2838142..2838621)	Shigella flexneri 2a str. 2457T	1079227
NP_838275.1	CDS	ispD	NC_004741.1	2838621	2839331	R	4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	complement(2838621..2839331)	Shigella flexneri 2a str. 2457T	1079228
NP_838276.1	CDS	ftsB	NC_004741.1	2839350	2839661	R	forms a complex with FtsL and FtsQ; colocalizes to the septal region of the dividing cell; membrane protein; cell division protein FtsB	complement(2839350..2839661)	Shigella flexneri 2a str. 2457T	1079229
NP_838277.1	CDS	ygbE	NC_004741.1	2839855	2840178	R	residues 1 to 107 of 107 are 99.06 pct identical to residues 1 to 107 of 107 from Escherichia coli K-12 : B2749; hypothetical protein	complement(2839855..2840178)	Shigella flexneri 2a str. 2457T	1079230
NP_838278.1	CDS	cysC	NC_004741.1	2840228	2840833	R	converts ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; in Escherichia coli this enzyme functions in cysteine biosynthesis; adenylylsulfate kinase	complement(2840228..2840833)	Shigella flexneri 2a str. 2457T	1079231
NP_838279.1	CDS	cysN	NC_004741.1	2840833	2842260	R	may be GTPase that regulates ATP sulfurylase activity that is involved in converting ATP and sulfate to diphosphate and adenylylsulfate; in Escherichia coli this enzyme functions in cysteine biosynthesis in the first step; forms a heterodimer with CysD; part of the GTP-binding elongation factor family CysN/NodQ; sulfate adenylyltransferase subunit 1	complement(2840833..2842260)	Shigella flexneri 2a str. 2457T	1079232
NP_838280.1	CDS	cysD	NC_004741.1	2842262	2843170	R	with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2	complement(2842262..2843170)	Shigella flexneri 2a str. 2457T	1079233
NP_838281.1	CDS	iap	NC_004741.1	2843422	2844459	D	catalyzes the sequential removal of 2 amino-terminal arginines from alkaline phosphatase isozyme 1 to form isozymes 2 and 3; alkaline phosphatase isozyme conversion aminopeptidase	2843422..2844459	Shigella flexneri 2a str. 2457T	1079234
NP_838282.1	CDS	cysH	NC_004741.1	2846306	2847040	R	catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite; phosphoadenosine phosphosulfate reductase	complement(2846306..2847040)	Shigella flexneri 2a str. 2457T	1079236
NP_838283.1	CDS	cysI	NC_004741.1	2847114	2848826	R	hemoprotein; NADPH dependent; with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide; sulfite reductase subunit beta	complement(2847114..2848826)	Shigella flexneri 2a str. 2457T	1079237
NP_838284.1	CDS	cysJ	NC_004741.1	2848826	2850625	R	catalyzes the reduction of sulfite to sulfide in the biosynthesis of L-cysteine from sulfate; a flavoprotein with flavin reductase activity; sulfite reductase subunit alpha	complement(2848826..2850625)	Shigella flexneri 2a str. 2457T	1079238
NP_838285.1	CDS	ygcM	NC_004741.1	2850944	2851306	D	residues 1 to 120 of 120 are 100.00 pct identical to residues 2 to 121 of 121 from Escherichia coli K-12 : B2765; 6-pyruvoyl tetrahydrobiopterin synthase	2850944..2851306	Shigella flexneri 2a str. 2457T	1079239
NP_838286.1	CDS	ygcN	NC_004741.1	2851354	2852655	D	residues 1 to 433 of 433 are 89.37 pct identical to residues 1 to 433 of 433 from Escherichia coli K-12 : B2766; hypothetical protein	2851354..2852655	Shigella flexneri 2a str. 2457T	1079240
NP_838287.1	CDS	ygcO	NC_004741.1	2852610	2852906	D	residues 1 to 98 of 98 are 92.85 pct identical to residues 1 to 98 of 98 from Escherichia coli K-12 : B2767; hypothetical protein	2852610..2852906	Shigella flexneri 2a str. 2457T	1079241
NP_838288.1	CDS	ygcQ	NC_004741.1	2853646	2854539	R	residues 1 to 297 of 297 are 97.30 pct identical to residues 1 to 297 of 297 from Escherichia coli K-12 : B2769; flavoprotein	complement(2853646..2854539)	Shigella flexneri 2a str. 2457T	1079243
NP_838289.1	CDS	ygcR	NC_004741.1	2854503	2855282	R	residues 1 to 259 of 259 are 93.05 pct identical to residues 3 to 261 of 261 from Escherichia coli K-12 : B2770; transporter	complement(2854503..2855282)	Shigella flexneri 2a str. 2457T	1079244
NP_838290.1	CDS	ygcS	NC_004741.1	2855260	2856669	R	residues 1 to 469 of 469 are 74.84 pct identical to residues 1 to 469 of 469 from Escherichia coli K-12 : B2771; transporter	complement(2855260..2856669)	Shigella flexneri 2a str. 2457T	1079245
NP_838291.1	CDS	S2981	NC_004741.1	2856691	2857485	R	residues 1 to 264 of 264 are 99.24 pct identical to residues 1 to 264 of 264 from Escherichia coli K-12 : B2772; hypothetical protein	complement(2856691..2857485)	Shigella flexneri 2a str. 2457T	1079246
NP_838292.1	CDS	S2982	NC_004741.1	2857600	2857875	D	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	2857600..2857875	Shigella flexneri 2a str. 2457T	1079247
NP_838293.1	CDS	S2983	NC_004741.1	2857794	2858297	D	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri]; IS1 orfB	2857794..2858297	Shigella flexneri 2a str. 2457T	1079248
NP_838294.1	CDS	ygcF	NC_004741.1	2858336	2859007	R	residues 1 to 223 of 223 are 93.27 pct identical to residues 1 to 223 of 223 from Escherichia coli K-12 : B2777; hypothetical protein	complement(2858336..2859007)	Shigella flexneri 2a str. 2457T	1079249
NP_838295.1	CDS	S2985	NC_004741.1	2859401	2859676	D	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	2859401..2859676	Shigella flexneri 2a str. 2457T	1079250
NP_838296.1	CDS	S2986	NC_004741.1	2859595	2860098	D	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri]; IS1 orfB	2859595..2860098	Shigella flexneri 2a str. 2457T	1079251
NP_838297.1	CDS	eno	NC_004741.1	2860969	2862267	R	enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase	complement(2860969..2862267)	Shigella flexneri 2a str. 2457T	1079253
NP_838298.1	CDS	pyrG	NC_004741.1	2862355	2863992	R	CTP synthase; CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase	complement(2862355..2863992)	Shigella flexneri 2a str. 2457T	1079254
NP_838299.1	CDS	mazG	NC_004741.1	2864220	2865011	R	functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase Era; nucleoside triphosphate pyrophosphohydrolase	complement(2864220..2865011)	Shigella flexneri 2a str. 2457T	1079255
NP_838300.1	CDS	relA	NC_004741.1	2865107	2867341	R	(p)ppGpp synthetase; catalyzes the formation of pppGpp and ppGpp from ATP and GTP or GDP; GDP/GTP pyrophosphokinase	complement(2865107..2867341)	Shigella flexneri 2a str. 2457T	1079256
NP_838301.1	CDS	rumA	NC_004741.1	2867389	2868690	R	in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S]; 23S rRNA 5-methyluridine methyltransferase	complement(2867389..2868690)	Shigella flexneri 2a str. 2457T	1079257
NP_838302.1	CDS	barA	NC_004741.1	2868747	2871503	D	part of the two-component regulatory system with UvrY; involved in the regulation of carbon metabolism via the csrA/csrB regulatory system; hybrid sensory histidine kinase BarA	2868747..2871503	Shigella flexneri 2a str. 2457T	1079258
NP_838303.1	CDS	ygcX	NC_004741.1	2871735	2873075	R	residues 1 to 446 of 446 are 99.77 pct identical to residues 1 to 446 of 446 from Escherichia coli K-12 : B2787; glucarate dehydratase	complement(2871735..2873075)	Shigella flexneri 2a str. 2457T	1079259
NP_838304.1	CDS	ygcY	NC_004741.1	2873096	2874436	R	residues 1 to 446 of 446 are 94.61 pct identical to residues 1 to 446 of 446 from Escherichia coli K-12 : B2788; glucarate dehydratase	complement(2873096..2874436)	Shigella flexneri 2a str. 2457T	1079260
NP_838305.1	CDS	S2996	NC_004741.1	2874438	2875790	R	residues 1 to 450 of 450 are 99.33 pct identical to residues 1 to 450 of 450 from Escherichia coli K-12 : B2789; transporter	complement(2874438..2875790)	Shigella flexneri 2a str. 2457T	1079262
NP_838306.1	CDS	S2997	NC_004741.1	2876224	2876673	R	An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin	complement(2876224..2876673)	Shigella flexneri 2a str. 2457T	1079263
NP_838307.1	CDS	yqcB	NC_004741.1	2876691	2877473	R	catalyzes formation of pseudouridine at position 65 in tRNA-Ile1 and tRNA-Asp; tRNA pseudouridine synthase C	complement(2876691..2877473)	Shigella flexneri 2a str. 2457T	1079264
NP_838308.1	CDS	S2999	NC_004741.1	2877473	2877802	R	residues 1 to 109 of 109 are 85.32 pct identical to residues 1 to 109 of 109 from Escherichia coli K-12 : B2792; hypothetical protein	complement(2877473..2877802)	Shigella flexneri 2a str. 2457T	1079265
NP_838309.1	CDS	syd	NC_004741.1	2878424	2878969	R	SecY regulator that either chelates excess SecY or negatively regulates the SecYE translocase function; SecY interacting protein Syd	complement(2878424..2878969)	Shigella flexneri 2a str. 2457T	1079267
NP_838310.1	CDS	queF	NC_004741.1	2879037	2879885	D	catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase	2879037..2879885	Shigella flexneri 2a str. 2457T	1079268
NP_838311.1	CDS	ygdH	NC_004741.1	2879997	2881361	D	residues 1 to 454 of 454 are 100.00 pct identical to residues 1 to 454 of 454 from Escherichia coli K-12 : B2795; hypothetical protein	2879997..2881361	Shigella flexneri 2a str. 2457T	1079269
NP_838312.1	CDS	S3004	NC_004741.1	2881463	2882797	D	residues 1 to 437 of 444 are 99.77 pct identical to residues 7 to 443 of 448 from GenPept : >gb|AAK18333.1|AF348706_22 (AF348706) IS4 orf [Shigella flexneri]; IS4 orf	2881463..2882797	Shigella flexneri 2a str. 2457T	1079270
NP_838313.1	CDS	sdaC	NC_004741.1	2883357	2884646	D	residues 1 to 429 of 429 are 96.27 pct identical to residues 1 to 429 of 429 from Escherichia coli K-12 : B2796; serine transporter	2883357..2884646	Shigella flexneri 2a str. 2457T	1079271
NP_838314.1	CDS	sdaB	NC_004741.1	2884704	2886071	D	residues 1 to 455 of 455 are 90.76 pct identical to residues 1 to 455 of 455 from Escherichia coli K-12 : B2797; L-serine dehydratase (deaminase), L-SD2	2884704..2886071	Shigella flexneri 2a str. 2457T	1079272
NP_838315.1	CDS	xni	NC_004741.1	2886092	2886937	D	has 3'-5' exonuclease activity that preferentially acts on ssDNA; also 3'-phosphodiesterase activity at sites with 3' incised apurinic/apyrimidinic sites; can remove 3' phosphoglycolate groups; exonuclease IX	2886092..2886937	Shigella flexneri 2a str. 2457T	1079970
NP_838316.1	CDS	fucO	NC_004741.1	2886990	2888138	R	residues 1 to 382 of 382 are 99.47 pct identical to residues 2 to 383 of 383 from Escherichia coli K-12 : B2799; L-1,2-propanediol oxidoreductase	complement(2886990..2888138)	Shigella flexneri 2a str. 2457T	1079273
NP_838317.1	CDS	fucA	NC_004741.1	2888166	2888813	R	catalyzes the formation of glycerone phosphate and (S)-lactaldehyde from L-fuculose 1-phosphate; L-fuculose phosphate aldolase	complement(2888166..2888813)	Shigella flexneri 2a str. 2457T	1079274
NP_838318.1	CDS	fucP	NC_004741.1	2889360	2890676	D	residues 1 to 438 of 438 are 89.49 pct identical to residues 1 to 438 of 438 from Escherichia coli K-12 : B2801; L-fucose transporter	2889360..2890676	Shigella flexneri 2a str. 2457T	1079275
NP_838319.1	CDS	fucI	NC_004741.1	2890709	2892484	D	catalyzes the conversion of the aldose L-fucose into the corresponding ketose L-fuculose; L-fucose isomerase	2890709..2892484	Shigella flexneri 2a str. 2457T	1079277
NP_838320.1	CDS	fucU	NC_004741.1	2894014	2894436	D	residues 1 to 140 of 140 are 99.28 pct identical to residues 1 to 140 of 140 from Escherichia coli K-12 : B2804; protein of fucose operon	2894014..2894436	Shigella flexneri 2a str. 2457T	1078544
NP_838321.1	CDS	fucR	NC_004741.1	2894494	2895225	D	regulates expression of genes involved in L-fucose utilization; DNA-binding transcriptional activator FucR	2894494..2895225	Shigella flexneri 2a str. 2457T	1079279
NP_838322.1	CDS	ygdE	NC_004741.1	2895269	2896369	R	residues 1 to 366 of 366 are 99.72 pct identical to residues 1 to 366 of 366 from Escherichia coli K-12 : B2806; RNA 2'-O-ribose methyltransferase	complement(2895269..2896369)	Shigella flexneri 2a str. 2457T	1079281
NP_838323.1	CDS	ygdD	NC_004741.1	2896362	2896757	R	residues 1 to 131 of 131 are 100.00 pct identical to residues 1 to 131 of 131 from Escherichia coli K-12 : B2807; hypothetical protein	complement(2896362..2896757)	Shigella flexneri 2a str. 2457T	1079282
NP_838324.1	CDS	gcvA	NC_004741.1	2896776	2897693	R	Glycine cleavage system transcriptional activator; activates the gcvTHP operon in the presence of glycine and represses the operon in its absence; DNA-binding transcriptional activator GcvA	complement(2896776..2897693)	Shigella flexneri 2a str. 2457T	1079283
NP_838325.1	CDS	S3018	NC_004741.1	2898044	2898274	R	residues 1 to 76 of 76 are 97.36 pct identical to residues 1 to 76 of 76 from Escherichia coli K-12 : B2809; hypothetical protein	complement(2898044..2898274)	Shigella flexneri 2a str. 2457T	1079285
NP_838326.1	CDS	S3019	NC_004741.1	2898463	2899668	D	residues 1 to 401 of 401 are 98.75 pct identical to residues 1 to 401 of 401 from Escherichia coli K-12 : B2810; cysteine sulfinate desulfinase	2898463..2899668	Shigella flexneri 2a str. 2457T	1079286
NP_838327.1	CDS	ygdK	NC_004741.1	2899668	2900111	D	residues 1 to 147 of 147 are 98.63 pct identical to residues 1 to 147 of 147 from Escherichia coli K-12 : B2811; hypothetical protein	2899668..2900111	Shigella flexneri 2a str. 2457T	1079287
NP_838328.1	CDS	ygdL	NC_004741.1	2900162	2900968	R	residues 1 to 268 of 268 are 99.62 pct identical to residues 1 to 268 of 268 from Escherichia coli K-12 : B2812; enzyme	complement(2900162..2900968)	Shigella flexneri 2a str. 2457T	1079289
NP_838329.1	CDS	mltA	NC_004741.1	2901206	2902303	R	membrane-bound, lytic; catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues; murein transglycosylase A	complement(2901206..2902303)	Shigella flexneri 2a str. 2457T	1079291
NP_838330.1	CDS	S3025	NC_004741.1	2902773	2904116	R	residues 1 to 447 of 447 are 92.61 pct identical to residues 1 to 447 of 447 from Escherichia coli K-12 : B2817; amidase	complement(2902773..2904116)	Shigella flexneri 2a str. 2457T	1079293
NP_838331.1	CDS	argA	NC_004741.1	2904258	2905589	D	catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis; N-acetylglutamate synthase	2904258..2905589	Shigella flexneri 2a str. 2457T	1079294
NP_838332.1	CDS	recD	NC_004741.1	2905651	2907477	R	helicase/nuclease; with RecBC catalyzes the exonucleolytic cleavage of DNA; RecD has 5' to 3' helicase activity; exonuclease V subunit alpha	complement(2905651..2907477)	Shigella flexneri 2a str. 2457T	1079295
NP_838333.1	CDS	recB	NC_004741.1	2907477	2911019	R	helicase/nuclease; with RecCD catalyzes the exonucleolytic cleavage of DNA; RecD has 5' to 3' helicase activity; exonuclease V subunit beta	complement(2907477..2911019)	Shigella flexneri 2a str. 2457T	1079296
NP_838334.1	CDS	ptr	NC_004741.1	2911012	2913900	R	residues 1 to 962 of 962 are 99.68 pct identical to residues 1 to 962 of 962 from Escherichia coli K-12 : B2821; protease III	complement(2911012..2913900)	Shigella flexneri 2a str. 2457T	1079298
NP_838335.1	CDS	recC	NC_004741.1	2914076	2917444	R	catalyzes ATP-dependent exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield 5'-phosphooligonucleotides; component of the RecBCD (Exo V) helicase/nuclease complex that is essential for recombination; exonuclease V subunit gamma	complement(2914076..2917444)	Shigella flexneri 2a str. 2457T	1079299
NP_838336.1	CDS	ppdC	NC_004741.1	2917457	2917807	R	residues 1 to 116 of 116 are 81.03 pct identical to residues 1 to 107 of 107 from Escherichia coli K-12 : B2823; hypothetical protein	complement(2917457..2917807)	Shigella flexneri 2a str. 2457T	1079300
NP_838337.2	CDS	ygdB	NC_004741.1	2917792	2918199	R	residues 16 to 121 of 121 are 96.22 pct identical to residues 16 to 121 of 121 from Escherichia coli K-12 : B2824; hypothetical protein	complement(2917792..2918199)	Shigella flexneri 2a str. 2457T	1079301
NP_838338.1	CDS	ppdB	NC_004741.1	2918196	2918759	R	residues 1 to 187 of 187 are 98.39 pct identical to residues 1 to 187 of 187 from Escherichia coli K-12 : B2825; hypothetical protein	complement(2918196..2918759)	Shigella flexneri 2a str. 2457T	1079303
NP_838339.1	CDS	thyA	NC_004741.1	2919404	2920198	R	ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase	complement(2919404..2920198)	Shigella flexneri 2a str. 2457T	1079305
NP_838340.1	CDS	lgt	NC_004741.1	2920205	2921080	R	transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase	complement(2920205..2921080)	Shigella flexneri 2a str. 2457T	1079306
NP_838341.1	CDS	ptsP	NC_004741.1	2921231	2923477	R	member of a second PTS chain involved in nitrogen metabolism; PtsP phosphorylates NPr; fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain	complement(2921231..2923477)	Shigella flexneri 2a str. 2457T	1079307
NP_838342.1	CDS	ygdP	NC_004741.1	2923490	2924020	R	hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase	complement(2923490..2924020)	Shigella flexneri 2a str. 2457T	1079308
NP_838343.1	CDS	mutH	NC_004741.1	2924705	2925394	D	MutH; Sequence-specific endonuclease that cleaves unmethylated GATC sequences during DNA repair; DNA mismatch repair protein	2924705..2925394	Shigella flexneri 2a str. 2457T	1078444
NP_838344.1	CDS	S3040	NC_004741.1	2925463	2926176	D	residues 1 to 237 of 237 are 76.37 pct identical to residues 1 to 237 of 237 from Escherichia coli K-12 : B2832; transporter	2925463..2926176	Shigella flexneri 2a str. 2457T	1079309
NP_838345.1	CDS	S3041	NC_004741.1	2926314	2926532	D	residues 1 to 72 of 72 are 100.00 pct identical to residues 1 to 72 of 72 from Escherichia coli K-12 : B2833; hypothetical protein	2926314..2926532	Shigella flexneri 2a str. 2457T	1078237
NP_838346.1	CDS	tas	NC_004741.1	2926640	2927680	D	complements the prephenate dehydrogenase dysfunction of an Escherichia coli tyrosine auxotroph strain; member of the aldo/keto reductase 2 family; crystal structure of purified Escherichia coli protein shows bound NADPH; aldo-keto reductase	2926640..2927680	Shigella flexneri 2a str. 2457T	1079759
NP_838347.1	CDS	ygeD	NC_004741.1	2927713	2928903	R	residues 1 to 396 of 396 are 84.63 pct identical to residues 1 to 397 of 397 from Escherichia coli K-12 : B2835; lysophospholipid transporter LplT	complement(2927713..2928903)	Shigella flexneri 2a str. 2457T	1079310
NP_838348.1	CDS	aas	NC_004741.1	2928896	2931055	R	Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3-phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1; bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase	complement(2928896..2931055)	Shigella flexneri 2a str. 2457T	1079311
NP_838349.1	CDS	galR	NC_004741.1	2931641	2932672	D	controls transcription of galETKM; DNA-binding transcriptional regulator GalR	2931641..2932672	Shigella flexneri 2a str. 2457T	1079312
NP_838350.1	CDS	lysA	NC_004741.1	2932679	2933941	R	catalyzes the decarboxylation of diaminopimelate into lysine; pyridoxal phosphate(PLP)-binding; diaminopimelate decarboxylase	complement(2932679..2933941)	Shigella flexneri 2a str. 2457T	1079313
NP_838351.1	CDS	lysR	NC_004741.1	2934063	2934998	D	activates the transcription of the lysA gene encoding diaminopimelate decarboxylase; DNA-binding transcriptional regulator LysR	2934063..2934998	Shigella flexneri 2a str. 2457T	1079314
NP_838352.1	CDS	ygeA	NC_004741.1	2934985	2935677	R	residues 1 to 230 of 230 are 99.13 pct identical to residues 1 to 230 of 230 from Escherichia coli K-12 : B2840; racemase	complement(2934985..2935677)	Shigella flexneri 2a str. 2457T	1079315
NP_838353.1	CDS	araE	NC_004741.1	2935806	2937224	R	residues 1 to 472 of 472 are 94.06 pct identical to residues 1 to 472 of 472 from Escherichia coli K-12 : B2841; low-affinity L-arabinose transport system proton symport protein	complement(2935806..2937224)	Shigella flexneri 2a str. 2457T	1080182
NP_838354.1	CDS	kduD	NC_004741.1	2937539	2938300	R	catalyzes the formation of 3-dehydro-2-deoxy-D-gluconate from 2-deoxy-D-gluconate; 2-deoxy-D-gluconate 3-dehydrogenase	complement(2937539..2938300)	Shigella flexneri 2a str. 2457T	1079520
NP_838355.1	CDS	kduI	NC_004741.1	2938330	2939166	R	4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2,5-hexodiulosonate; 5-keto-4-deoxyuronate isomerase	complement(2938330..2939166)	Shigella flexneri 2a str. 2457T	1079316
NP_838356.1	CDS	yqeF	NC_004741.1	2939453	2940634	R	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis; acetyl-CoA acetyltransferase	complement(2939453..2940634)	Shigella flexneri 2a str. 2457T	1079318
NP_838357.1	CDS	S3053	NC_004741.1	2941000	2942118	D	residues 1 to 372 of 372 are 99.19 pct identical to residues 38 to 409 of 409 from Escherichia coli K-12 : B2845; transporter protein	2941000..2942118	Shigella flexneri 2a str. 2457T	1078306
NP_838358.1	CDS	S3055	NC_004741.1	2942753	2943052	D	residues 1 to 99 of 99 are 100.00 pct identical to residues 1 to 99 of 99 from GenPept : >gb|AAL57580.1|AF453442_9 (AF453442) transposase 2 [Escherichia coli]; IS3 orfA	2942753..2943052	Shigella flexneri 2a str. 2457T	1079319
NP_838359.1	CDS	S3056	NC_004741.1	2943049	2943915	D	residues 1 to 288 of 288 are 99.30 pct identical to residues 1 to 288 of 288 from GenPept : >gb|AAL57519.1|AF453441_3 (AF453441) transposase 1 [Escherichia coli]; IS3 orfB	2943049..2943915	Shigella flexneri 2a str. 2457T	1079321
NP_838360.1	CDS	S3059	NC_004741.1	2945154	2946143	R	residues 5 to 326 of 329 are 92.54 pct identical to residues 4 to 325 of 327 from GenPept : >emb|CAD02863.1| (AL627277) hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi]; hypothetical protein	complement(2945154..2946143)	Shigella flexneri 2a str. 2457T	1079325
NP_838361.1	CDS	S3060	NC_004741.1	2946227	2946718	R	residues 1 to 163 of 163 are 79.75 pct identical to residues 1 to 163 of 163 from GenPept : >emb|CAD02864.1| (AL627277) hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi]; hypothetical protein	complement(2946227..2946718)	Shigella flexneri 2a str. 2457T	1077055
NP_838362.1	CDS	S3062	NC_004741.1	2947016	2947762	R	residues 17 to 116 of 248 are 40.77 pct identical to residues 19 to 116 of 280 from GenPept : >emb|CAD09973.1| (AL513384) hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi]; hypothetical protein	complement(2947016..2947762)	Shigella flexneri 2a str. 2457T	1079326
NP_838363.1	CDS	S3063	NC_004741.1	2948881	2949213	R	no significant similarities; hypothetical protein	complement(2948881..2949213)	Shigella flexneri 2a str. 2457T	1079327
NP_838364.1	CDS	S3064	NC_004741.1	2949332	2950942	R	residues 1 to 511 of 536 are 96.67 pct identical to residues 1 to 511 of 548 from GenPept : >emb|CAD02867.1| (AL627277) possible integrase [Salmonella enterica subsp. enterica serovar Typhi]; integrase	complement(2949332..2950942)	Shigella flexneri 2a str. 2457T	1079328
NP_838365.1	CDS	S3067	NC_004741.1	2951229	2952008	R	residues 2 to 260 of 260 are 89.18 pct identical to residues 1 to 259 of 259 from Escherichia coli K-12 : B2865; lipoprotein	complement(2951229..2952008)	Shigella flexneri 2a str. 2457T	1079329
NP_838366.1	CDS	S3068	NC_004741.1	2952399	2954696	D	molybdenum cofactor-binding protein; participates in purine salvage; xanthine dehydrogenase subunit XdhA	2952399..2954696	Shigella flexneri 2a str. 2457T	1079331
NP_838367.1	CDS	ygeT	NC_004741.1	2954707	2955585	D	FAD-binding subunit; with XdhA and XdhC participates in purine salvage; xanthine dehydrogenase subunit XdhB	2954707..2955585	Shigella flexneri 2a str. 2457T	1079320
NP_838368.1	CDS	S3070	NC_004741.1	2955582	2956061	D	iron-sulfur-binding subunit; with XdhA and XdhB participates in purine salvage; xanthine dehydrogenase subunit XdhC	2955582..2956061	Shigella flexneri 2a str. 2457T	1079332
NP_838369.1	CDS	S3071	NC_004741.1	2956174	2956449	D	residues 1 to 91 of 91 are 98.90 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	2956174..2956449	Shigella flexneri 2a str. 2457T	1079333
NP_838370.1	CDS	S3072	NC_004741.1	2956368	2956871	D	residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri]; IS1 orfB	2956368..2956871	Shigella flexneri 2a str. 2457T	1079334
NP_838371.1	CDS	ygfU	NC_004741.1	2957303	2958820	D	residues 1 to 505 of 505 are 99.00 pct identical to residues 1 to 505 of 505 from Escherichia coli K-12 : B2888; permease	2957303..2958820	Shigella flexneri 2a str. 2457T	1080977
NP_838372.1	CDS	S3074	NC_004741.1	2959070	2959618	D	catalyzes the rearrangement of isopentenyl diphosphate to dimethylallyl phosphate; isopentenyl-diphosphate delta-isomerase	2959070..2959618	Shigella flexneri 2a str. 2457T	1079336
NP_838373.1	CDS	lysS	NC_004741.1	2959661	2961178	R	class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase	complement(2959661..2961178)	Shigella flexneri 2a str. 2457T	1079763
NP_838374.1	CDS	prfB	NC_004741.1	2961188	2962286	R	recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1; peptide chain release factor 2	complement(join(2961188..2962210,2962212..2962286))	Shigella flexneri 2a str. 2457T	1079337
NP_838375.1	CDS	recJ	NC_004741.1	2962377	2964110	R	5'-3' single-stranded-DNA-specific exonuclease; ssDNA exonuclease RecJ	complement(2962377..2964110)	Shigella flexneri 2a str. 2457T	1079338
NP_838376.1	CDS	dsbC	NC_004741.1	2964116	2964826	R	DsbC; periplasmic protein with protein disulfide isomerase activity; this protein also shows disulfide oxidoreductase activity; thiol:disulfide interchange protein DsbC	complement(2964116..2964826)	Shigella flexneri 2a str. 2457T	1079339
NP_838377.1	CDS	xerD	NC_004741.1	2964851	2965747	R	site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerD	complement(2964851..2965747)	Shigella flexneri 2a str. 2457T	1076571
NP_838378.1	CDS	fldB	NC_004741.1	2965859	2966380	D	An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic; flavodoxin FldB	2965859..2966380	Shigella flexneri 2a str. 2457T	1079340
NP_838379.1	CDS	S3081	NC_004741.1	2966420	2966827	R	residues 1 to 135 of 135 are 99.25 pct identical to residues 1 to 135 of 135 from Escherichia coli K-12 : B2896; hypothetical protein	complement(2966420..2966827)	Shigella flexneri 2a str. 2457T	1079341
NP_838380.1	CDS	ygfY	NC_004741.1	2966808	2967074	R	residues 1 to 88 of 88 are 100.00 pct identical to residues 1 to 88 of 88 from Escherichia coli K-12 : B2897; hypothetical protein	complement(2966808..2967074)	Shigella flexneri 2a str. 2457T	1079342
NP_838381.1	CDS	ygfZ	NC_004741.1	2967317	2968297	D	physiological role is not clear; not essential for growth but mutants grow poorly; mutations suppress hda null mutations; may be involved in regulation of ATP-DnaA levels; may also be involved in regulation of tRNA modifications; can bind folic acid and tetrahydrofolate; forms a three domain ring-like structure with a central channel; structurally similar to DMGO protein from A. globiformis; shows sequence similarity to yeast CAF17 transcriptional regulator; global regulator	2967317..2968297	Shigella flexneri 2a str. 2457T	1079343
NP_838382.1	CDS	S3084	NC_004741.1	2968493	2969152	R	residues 1 to 219 of 219 are 92.69 pct identical to residues 1 to 219 of 219 from Escherichia coli K-12 : B2899; oxidoreductase	complement(2968493..2969152)	Shigella flexneri 2a str. 2457T	1079344
NP_838383.1	CDS	bglA	NC_004741.1	2969671	2971104	D	residues 1 to 477 of 477 are 95.59 pct identical to residues 3 to 479 of 479 from Escherichia coli K-12 : B2901; 6-phospho-beta-glucosidase	2969671..2971104	Shigella flexneri 2a str. 2457T	1076479
NP_838384.1	CDS	ygfF	NC_004741.1	2971161	2971904	R	residues 1 to 247 of 247 are 99.19 pct identical to residues 1 to 247 of 247 from Escherichia coli K-12 : B2902; hypothetical protein	complement(2971161..2971904)	Shigella flexneri 2a str. 2457T	1079346
NP_838385.1	CDS	gcvP	NC_004741.1	2972171	2975044	R	acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase	complement(2972171..2975044)	Shigella flexneri 2a str. 2457T	1079347
NP_838386.1	CDS	gcvH	NC_004741.1	2975163	2975552	R	part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H	complement(2975163..2975552)	Shigella flexneri 2a str. 2457T	1079349
NP_838387.1	CDS	gcvT	NC_004741.1	2975576	2976670	R	catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T	complement(2975576..2976670)	Shigella flexneri 2a str. 2457T	1079350
NP_838388.1	CDS	visC	NC_004741.1	2977118	2978320	R	residues 1 to 400 of 400 are 97.50 pct identical to residues 1 to 400 of 400 from Escherichia coli K-12 : B2906; hypothetical protein	complement(2977118..2978320)	Shigella flexneri 2a str. 2457T	1079351
NP_838389.1	CDS	ubiH	NC_004741.1	2978343	2979521	R	Oxygenase that introduces the hydroxyl group at carbon four of 2-octaprenyl-6-methoxyphenol resulting in the formation of 2-octaprenyl-6-methoxy-1,4-benzoquinone; 2-octaprenyl-6-methoxyphenyl hydroxylase	complement(2978343..2979521)	Shigella flexneri 2a str. 2457T	1079352
NP_838390.1	CDS	pepP	NC_004741.1	2979518	2980843	R	exopeptidase able to cleave the peptide bond of the last amino acid if linked to a proline residue; substrate can be as short as a dipeptide; proline aminopeptidase P II	complement(2979518..2980843)	Shigella flexneri 2a str. 2457T	1079353
NP_838391.1	CDS	ygfB	NC_004741.1	2980869	2981447	R	the crystal structure of Haemophilus influenzae HI0817 showed that this protein forms dimers; function unknown; hypothetical protein	complement(2980869..2981447)	Shigella flexneri 2a str. 2457T	1079355
NP_838392.1	CDS	ygfE	NC_004741.1	2981615	2981944	D	residues 1 to 109 of 109 are 100.00 pct identical to residues 1 to 109 of 109 from Escherichia coli K-12 : B2910; Z-ring-associated protein	2981615..2981944	Shigella flexneri 2a str. 2457T	1079356
NP_838393.1	CDS	ygfA	NC_004741.1	2982244	2982792	D	ygfA expression increases five to eight fold in Escherichia coli cells growing as biofilms; unknown function; ligase	2982244..2982792	Shigella flexneri 2a str. 2457T	1079357
NP_838394.1	CDS	serA	NC_004741.1	2983573	2984805	R	catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase	complement(2983573..2984805)	Shigella flexneri 2a str. 2457T	1079696
NP_838395.1	CDS	rpiA	NC_004741.1	2985061	2985720	R	Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A	complement(2985061..2985720)	Shigella flexneri 2a str. 2457T	1079359
NP_838396.1	CDS	iciA	NC_004741.1	2986103	2986996	D	specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; chromosome replication initiation inhibitor protein	2986103..2986996	Shigella flexneri 2a str. 2457T	1079361
NP_838397.1	CDS	sbm	NC_004741.1	2987200	2989344	D	MDM; functions in conversion of succinate to propionate; methylmalonyl-CoA mutase	2987200..2989344	Shigella flexneri 2a str. 2457T	1079363
NP_838398.1	CDS	ygfD	NC_004741.1	2989337	2990332	D	functions in transport of arginine/ornithine; inner membrane ATPase that cleaves ATP and phosphorylates two periplasmic proteins that function as two distinct transport systems, the AO (arginine and ornithine) and LAO (lysine, arginine, and ornithine) periplasmic binding proteins; arginine/ornithine transport system ATPase	2989337..2990332	Shigella flexneri 2a str. 2457T	1079365
NP_838399.2	CDS	ygfG	NC_004741.1	2990343	2991128	D	catalyzes the formation of propanoyl-CoA from methylmalonyl-CoA; methylmalonyl-CoA decarboxylase	2990343..2991128	Shigella flexneri 2a str. 2457T	1079366
NP_838400.1	CDS	ygfI	NC_004741.1	2992572	2993522	R	residues 1 to 285 of 316 are 94.38 pct identical to residues 6 to 290 of 303 from Escherichia coli K-12 : B2921; LYSR-type transcriptional regulator	complement(2992572..2993522)	Shigella flexneri 2a str. 2457T	1079367
NP_838401.1	CDS	yggE	NC_004741.1	2993689	2994429	R	residues 1 to 246 of 246 are 94.71 pct identical to residues 1 to 246 of 246 from Escherichia coli K-12 : B2922; hypothetical protein	complement(2993689..2994429)	Shigella flexneri 2a str. 2457T	1079368
NP_838402.1	CDS	yggA	NC_004741.1	2994522	2995157	R	Involved in the export of arginine; arginine exporter protein	complement(2994522..2995157)	Shigella flexneri 2a str. 2457T	1079369
NP_838403.1	CDS	yggB	NC_004741.1	2995296	2996156	R	participates in the regulation of osmotic pressure changes within the cel; mechanosensitive channel MscS	complement(2995296..2996156)	Shigella flexneri 2a str. 2457T	1079370
NP_838404.1	CDS	fba	NC_004741.1	2996347	2997426	R	catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; fructose-bisphosphate aldolase	complement(2996347..2997426)	Shigella flexneri 2a str. 2457T	1079371
NP_838405.1	CDS	pgk	NC_004741.1	2997641	2998804	R	Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase	complement(2997641..2998804)	Shigella flexneri 2a str. 2457T	1079372
NP_838406.1	CDS	epd	NC_004741.1	2998854	2999873	R	NAD-dependent; catalyzes the formation of 4-phosphoerythronate from erythrose 4-phosphate in the biosynthesis of pyridoxine 5'-phosphate; erythrose 4-phosphate dehydrogenase	complement(2998854..2999873)	Shigella flexneri 2a str. 2457T	1079373
NP_838407.1	CDS	S3113	NC_004741.1	3000407	3000676	D	residues 1 to 89 of 89 are 98.87 pct identical to residues 55 to 143 of 143 from GenPept : >gb|AAG58054.1|AE005523_3 (AE005523) orf; hypothetical protein [Escherichia coli O157:H7 EDL933]; DNA-binding protein	3000407..3000676	Shigella flexneri 2a str. 2457T	1079374
NP_838408.1	CDS	S3114	NC_004741.1	3000699	3001277	D	residues 1 to 192 of 192 are 81.25 pct identical to residues 1 to 192 of 192 from GenPept : >gb|AAG58055.1|AE005523_4 (AE005523) orf; hypothetical protein [Escherichia coli O157:H7 EDL933]; inner membrane protein	3000699..3001277	Shigella flexneri 2a str. 2457T	1079375
NP_838409.1	CDS	S3115	NC_004741.1	3001278	3001586	D	residues 1 to 102 of 102 are 83.33 pct identical to residues 1 to 102 of 235 from GenPept : >gb|AAG58056.1|AE005523_5 (AE005523) orf; hypothetical protein [Escherichia coli O157:H7 EDL933]; lipoprotein	3001278..3001586	Shigella flexneri 2a str. 2457T	1079377
NP_838410.1	CDS	S3116	NC_004741.1	3001587	3001985	D	residues 1 to 132 of 132 are 99.24 pct identical to residues 104 to 235 of 235 from GenPept : >gb|AAG58056.1|AE005523_5 (AE005523) orf; hypothetical protein [Escherichia coli O157:H7 EDL933]; lipoprotein	3001587..3001985	Shigella flexneri 2a str. 2457T	1079378
NP_838411.1	CDS	S3117	NC_004741.1	3001973	3002650	D	residues 1 to 225 of 225 are 91.55 pct identical to residues 1 to 225 of 225 from GenPept : >gb|AAG58057.1|AE005523_6 (AE005523)  ATP-binding protein of ABC transport system [Escherichia coli O157:H7 EDL933]; ATP-binding protein of ABC transport system	3001973..3002650	Shigella flexneri 2a str. 2457T	1079379
NP_838412.1	CDS	S3118	NC_004741.1	3002644	3003321	D	residues 1 to 225 of 225 are 90.22 pct identical to residues 1 to 225 of 225 from GenPept : >dbj|BAB37226.1| (AP002563)  ABC-transporter ATP-binding subunit [Escherichia coli O157:H7]; ATP-binding protein of ABC transport system	3002644..3003321	Shigella flexneri 2a str. 2457T	1079380
NP_838413.1	CDS	yggD	NC_004741.1	3004003	3004512	R	residues 1 to 151 of 169 are 96.68 pct identical to residues 1 to 151 of 169 from Escherichia coli K-12 : B2929; DNA-binding transcriptional regulator	complement(3004003..3004512)	Shigella flexneri 2a str. 2457T	1079382
NP_838414.1	CDS	yggF	NC_004741.1	3004534	3005499	R	residues 1 to 321 of 321 are 99.37 pct identical to residues 1 to 321 of 321 from Escherichia coli K-12 : B2930; fructose-1,6-bisphosphatase II-like protein	complement(3004534..3005499)	Shigella flexneri 2a str. 2457T	1079383
NP_838415.1	CDS	S3122	NC_004741.1	3005496	3006485	R	residues 1 to 329 of 329 are 98.78 pct identical to residues 1 to 329 of 329 from Escherichia coli K-12 : B2931; oxidoreductase	complement(3005496..3006485)	Shigella flexneri 2a str. 2457T	1079384
NP_838416.1	CDS	S3124	NC_004741.1	3006739	3007242	R	residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri]; IS1 orfB	complement(3006739..3007242)	Shigella flexneri 2a str. 2457T	1079386
NP_838417.1	CDS	S3125	NC_004741.1	3007161	3007436	R	residues 1 to 91 of 91 are 98.90 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(3007161..3007436)	Shigella flexneri 2a str. 2457T	1079388
NP_838418.1	CDS	S3126	NC_004741.1	3007927	3008835	D	residues 32 to 302 of 302 are 48.89 pct identical to residues 32 to 303 of 308 from GenPept : >emb|CAC90171.1| (AJ414147)  SPFH domain protein [Yersinia pestis]; serine protease	3007927..3008835	Shigella flexneri 2a str. 2457T	1079389
NP_838419.1	CDS	tktA	NC_004741.1	3008881	3010872	R	catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase	complement(3008881..3010872)	Shigella flexneri 2a str. 2457T	1079392
NP_838420.1	CDS	yggG	NC_004741.1	3011024	3011908	D	residues 1 to 294 of 294 are 92.85 pct identical to residues 1 to 294 of 294 from Escherichia coli K-12 : B2936; hypothetical protein	3011024..3011908	Shigella flexneri 2a str. 2457T	1079393
NP_838421.1	CDS	speB	NC_004741.1	3012114	3013034	R	catalyzes the formation of putrescine from agmatine; agmatinase	complement(3012114..3013034)	Shigella flexneri 2a str. 2457T	1077797
NP_838422.1	CDS	S3130	NC_004741.1	3013170	3013544	R	residues 1 to 124 of 124 are 97.58 pct identical to residues 120 to 243 of 243 from GenPept : >gb|AAG58068.1|AE005524_4 (AE005524) Z4282 gene product [Escherichia coli O157:H7 EDL933]; lipoprotein	complement(3013170..3013544)	Shigella flexneri 2a str. 2457T	1079395
NP_838423.1	CDS	S3131	NC_004741.1	3013570	3014073	R	residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri]; IS1 orfB	complement(3013570..3014073)	Shigella flexneri 2a str. 2457T	1079397
NP_838424.1	CDS	S3132	NC_004741.1	3013992	3014267	R	residues 1 to 91 of 91 are 98.90 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(3013992..3014267)	Shigella flexneri 2a str. 2457T	1079398
NP_838425.1	CDS	speA	NC_004741.1	3014414	3016390	R	catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis; arginine decarboxylase	complement(3014414..3016390)	Shigella flexneri 2a str. 2457T	1079399
NP_838426.1	CDS	yqgB	NC_004741.1	3016399	3016545	R	residues 1 to 48 of 48 are 93.75 pct identical to residues 1 to 48 of 48 from Escherichia coli K-12 : B2939; hypothetical protein	complement(3016399..3016545)	Shigella flexneri 2a str. 2457T	1079400
NP_838427.1	CDS	yqgC	NC_004741.1	3016666	3016881	D	residues 1 to 71 of 71 are 77.46 pct identical to residues 1 to 71 of 71 from Escherichia coli K-12 : B2940; hypothetical protein	3016666..3016881	Shigella flexneri 2a str. 2457T	1076489
NP_838428.1	CDS	yqgD	NC_004741.1	3016878	3017129	R	residues 1 to 83 of 83 are 98.79 pct identical to residues 1 to 83 of 83 from Escherichia coli K-12 : B2941; hypothetical protein	complement(3016878..3017129)	Shigella flexneri 2a str. 2457T	1079401
NP_838429.1	CDS	metK	NC_004741.1	3017185	3018339	D	methionine adenosyltransferase; catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase	3017185..3018339	Shigella flexneri 2a str. 2457T	1079402
NP_838430.1	CDS	galP	NC_004741.1	3018815	3020170	D	residues 1 to 451 of 451 are 97.11 pct identical to residues 14 to 464 of 464 from Escherichia coli K-12 : B2943; major facilitator superfamily galactose-proton symporter	3018815..3020170	Shigella flexneri 2a str. 2457T	1078092
NP_838431.1	CDS	sprT	NC_004741.1	3020247	3020744	D	residues 1 to 165 of 165 are 98.78 pct identical to residues 1 to 165 of 165 from Escherichia coli K-12 : B2944; hypothetical protein	3020247..3020744	Shigella flexneri 2a str. 2457T	1079403
NP_838432.1	CDS	endA	NC_004741.1	3020839	3021546	D	residues 1 to 235 of 235 are 94.04 pct identical to residues 1 to 235 of 235 from Escherichia coli K-12 : B2945; DNA-specific endonuclease I	3020839..3021546	Shigella flexneri 2a str. 2457T	1079405
NP_838433.1	CDS	yggJ	NC_004741.1	3021626	3022357	D	in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE	3021626..3022357	Shigella flexneri 2a str. 2457T	1079407
NP_838434.1	CDS	gshB	NC_004741.1	3022370	3023320	D	The second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase	3022370..3023320	Shigella flexneri 2a str. 2457T	1079408
NP_838435.2	CDS	yqgE	NC_004741.1	3023429	3023992	D	residues 1 to 211 of 211 are 100.00 pct identical to residues 1 to 211 of 211 from Escherichia coli K-12 : B2948; hypothetical protein	3023429..3023992	Shigella flexneri 2a str. 2457T	1079409
NP_838436.1	CDS	yqgF	NC_004741.1	3023992	3024408	D	similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein	3023992..3024408	Shigella flexneri 2a str. 2457T	1079435
NP_838437.1	CDS	yggR	NC_004741.1	3024584	3025609	R	residues 1 to 341 of 341 are 98.24 pct identical to residues 1 to 341 of 341 from Escherichia coli K-12 : B2950; transporter	complement(3024584..3025609)	Shigella flexneri 2a str. 2457T	1079411
NP_838438.1	CDS	yggS	NC_004741.1	3025582	3026286	D	residues 1 to 234 of 234 are 93.16 pct identical to residues 1 to 234 of 234 from Escherichia coli K-12 : B2951; hypothetical protein	3025582..3026286	Shigella flexneri 2a str. 2457T	1079412
NP_838439.1	CDS	yggT	NC_004741.1	3026304	3026870	D	residues 1 to 188 of 188 are 83.51 pct identical to residues 1 to 188 of 188 from Escherichia coli K-12 : B2952; resistance protein	3026304..3026870	Shigella flexneri 2a str. 2457T	1079413
NP_838440.2	CDS	yggU	NC_004741.1	3026867	3027157	D	residues 1 to 100 of 100 are 85.00 pct identical to residues 1 to 100 of 100 from Escherichia coli K-12 : B2953; hypothetical protein	3026867..3027157	Shigella flexneri 2a str. 2457T	1079414
NP_838441.1	CDS	yggV	NC_004741.1	3027165	3027758	D	HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; deoxyribonucleotide triphosphate pyrophosphatase	3027165..3027758	Shigella flexneri 2a str. 2457T	1079415
NP_838442.1	CDS	yggW	NC_004741.1	3027751	3028887	D	catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase	3027751..3028887	Shigella flexneri 2a str. 2457T	1079416
NP_838443.1	CDS	S3151	NC_004741.1	3029201	3029554	D	residues 1 to 114 of 117 are 80.70 pct identical to residues 1 to 114 of 216 from NRprotein_Feb03 : >gb|AAF06334.1|AF193593_1  C4-dicarboxylate periplasmic binding protein precursor DctP [Klebsiella pneumoniae]; hypothetical protein	3029201..3029554	Shigella flexneri 2a str. 2457T	1079418
NP_838444.1	CDS	S3152	NC_004741.1	3029571	3030164	D	residues 1 to 191 of 197 are 52.60 pct identical to residues 116 to 307 of 312 from NRprotein_Feb03 : >ref|NP_762983.1| TRAP-type C4-dicarboxylate transport system, periplasmic component [Vibrio vulnificus CMCP6] gb|AAO07973.1|AE016811_214 TRAP-type C4-dicarboxylate transport system, periplasmic component [Vibrio vulnificus CMCP6]; hypothetical protein	3029571..3030164	Shigella flexneri 2a str. 2457T	1079419
NP_838445.1	CDS	S3153	NC_004741.1	3030209	3030712	D	residues 36 to 166 of 167 are 23.13 pct identical to residues 27 to 157 of 157 from Escherichia coli K-12 : B3577; hypothetical protein	3030209..3030712	Shigella flexneri 2a str. 2457T	1079420
NP_838446.1	CDS	S3154	NC_004741.1	3031144	3031419	R	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(3031144..3031419)	Shigella flexneri 2a str. 2457T	1079421
NP_838447.1	CDS	S3155	NC_004741.1	3031476	3032777	D	residues 5 to 393 of 433 are 33.07 pct identical to residues 1 to 384 of 424 from Escherichia coli K-12 : B3578; hypothetical protein	3031476..3032777	Shigella flexneri 2a str. 2457T	1079422
NP_838448.1	CDS	yggM	NC_004741.1	3032878	3033840	R	residues 1 to 320 of 320 are 99.37 pct identical to residues 1 to 320 of 335 from Escherichia coli K-12 : B2956; alpha helix chain	complement(3032878..3033840)	Shigella flexneri 2a str. 2457T	1078051
NP_838449.1	CDS	ansB	NC_004741.1	3033957	3035003	R	catalyzes the formation of aspartate from asparagine, periplasmic; regulated by cyclic AMP receptor protein (CRP) and also induced by anaerobiosis; L-asparaginase II	complement(3033957..3035003)	Shigella flexneri 2a str. 2457T	1079423
NP_838450.1	CDS	yggN	NC_004741.1	3035179	3035895	R	residues 1 to 238 of 238 are 99.57 pct identical to residues 2 to 239 of 239 from Escherichia coli K-12 : B2958; hypothetical protein	complement(3035179..3035895)	Shigella flexneri 2a str. 2457T	1079424
NP_838451.2	CDS	yggL	NC_004741.1	3036082	3036408	R	residues 1 to 118 of 118 are 98.30 pct identical to residues 1 to 118 of 118 from Escherichia coli K-12 : B2959; hypothetical protein	complement(3036082..3036408)	Shigella flexneri 2a str. 2457T	1079425
NP_838452.1	CDS	trmB	NC_004741.1	3036408	3037127	R	tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase	complement(3036408..3037127)	Shigella flexneri 2a str. 2457T	1077756
NP_838453.1	CDS	mutY	NC_004741.1	3037288	3038340	D	residues 1 to 350 of 350 are 98.85 pct identical to residues 1 to 350 of 350 from Escherichia coli K-12 : B2961; involved in G.C -->T.A transversions; adenine DNA glycosylase	3037288..3038340	Shigella flexneri 2a str. 2457T	1079426
NP_838454.1	CDS	yggX	NC_004741.1	3038368	3038643	D	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from Escherichia coli K-12 : B2962; hypothetical protein	3038368..3038643	Shigella flexneri 2a str. 2457T	1079427
NP_838455.1	CDS	mltC	NC_004741.1	3038705	3039787	D	Murein hydrolase C; membrane-bound; lytic; catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues; murein transglycosylase C	3038705..3039787	Shigella flexneri 2a str. 2457T	1079428
NP_838456.1	CDS	nupG	NC_004741.1	3039941	3041245	D	residues 1 to 434 of 434 are 100.00 pct identical to residues 1 to 434 of 434 from Escherichia coli K-12 : B2964; permease for nucleosides	3039941..3041245	Shigella flexneri 2a str. 2457T	1079429
NP_838457.1	CDS	speC	NC_004741.1	3041294	3043489	R	residues 1 to 731 of 731 are 96.03 pct identical to residues 1 to 731 of 731 from Escherichia coli K-12 : B2965; ornithine decarboxylase	complement(3041294..3043489)	Shigella flexneri 2a str. 2457T	1079430
NP_838458.1	CDS	yqgA	NC_004741.1	3043827	3044534	D	residues 1 to 235 of 235 are 76.59 pct identical to residues 1 to 235 of 235 from Escherichia coli K-12 : B2966; transporter	3043827..3044534	Shigella flexneri 2a str. 2457T	1079431
NP_838459.1	CDS	S4822	NC_004741.1	3044913	3046175	D	residues 1 to 420 of 420 are 97.72 pct identical to residues 1 to 420 of 420 from NRprotein_Feb03 : >ref|NP_757064.1| Prophage P4 integrase [Escherichia coli CFT073] gb|AAN83638.1|AE016771_149 Prophage P4 integrase [Escherichia coli CFT073]; P4-type integrase	3044913..3046175	Shigella flexneri 2a str. 2457T	1079433
NP_838460.1	CDS	S3169	NC_004741.1	3046628	3050143	D	residues 1 to 1171 of 1171 are 92.99 pct identical to residues 1 to 1171 of 1171 from GenPept : >gb|AAL23307.1| (AE008910)  superfamily I DNA helicases [Salmonella typhimurium LT2]; superfamily I DNA helicase	3046628..3050143	Shigella flexneri 2a str. 2457T	1079434
NP_838461.1	CDS	S4823	NC_004741.1	3051492	3052253	D	residues 1 to 253 of 253 are 75.88 pct identical to residues 148 to 400 of 400 from NRprotein_Feb03 : >dbj|BAA77991.1| traF [Plasmid R64] dbj|BAB91674.1| 99 pct identical to gp:AB021078_83[TraF of plasmid ColIb-P9] [Salmonella typhimurium]; hypothetical protein	3051492..3052253	Shigella flexneri 2a str. 2457T	1079390
NP_838462.1	CDS	sigA	NC_004741.1	3052614	3056471	D	residues 1 to 1285 of 1285 are 100.00 pct identical to residues 1 to 1285 of 1285 from NRprotein_Feb03 : >ref|NP_708742.1| exported serine protease SigA [Shigella flexneri 2a str. 301] gb|AAF67320.1|AF200692_1 exported serine protease SigA [Shigella flexneri 2a] gb|AAN44449.1|AE015310_3 exported serine protease SigA [Shigella flexneri 2a str. 301]; serine protease	3052614..3056471	Shigella flexneri 2a str. 2457T	1079436
NP_838463.1	CDS	S3177	NC_004741.1	3059545	3059763	D	residues 1 to 72 of 72 are 97.22 pct identical to residues 331 to 402 of 402 from GenPept : >gb|AAG18473.1|AF143819_2 (AF143819) transposase-like protein; TnpA [Escherichia coli]; hypothetical protein	3059545..3059763	Shigella flexneri 2a str. 2457T	1079437
NP_838464.1	CDS	pic	NC_004741.1	3059914	3063126	R	residues 1 to 1070 of 1070 are 96.16 pct identical to residues 304 to 1373 of 1373 from GenPept : >gb|AAK00464.1| (AF200692) Pic [Shigella flexneri 2a]; serine protease precurser	complement(3059914..3063126)	Shigella flexneri 2a str. 2457T	1079438
NP_838465.1	CDS	S3180	NC_004741.1	3064760	3065593	R	residues 1 to 277 of 277 are 100.00 pct identical to residues 226 to 502 of 502 from GenPept : >dbj|BAA84894.1| (AB024946) orf59 [Escherichia coli]; reverse transcriptase-like protein	complement(3064760..3065593)	Shigella flexneri 2a str. 2457T	1079439
NP_838466.1	CDS	S3181	NC_004741.1	3065587	3066267	R	residues 1 to 208 of 226 are 95.19 pct identical to residues 1 to 208 of 376 from GenPept : >gb|AAC73361.1| (AE000133) orf, hypothetical protein [Escherichia coli K12]; reverse transcriptase-like protein	complement(3065587..3066267)	Shigella flexneri 2a str. 2457T	1079440
NP_838467.1	CDS	S3184	NC_004741.1	3067353	3067679	R	residues 1 to 108 of 108 are 74.07 pct identical to residues 1 to 108 of 108 from GenPept : >gb|AAL67399.1|AF447814_67 (AF447814) TnpE-like protein [Escherichia coli]; IS629 orfA	complement(3067353..3067679)	Shigella flexneri 2a str. 2457T	1079441
NP_838468.1	CDS	S3185	NC_004741.1	3067962	3068387	R	residues 15 to 119 of 141 are 37.27 pct identical to residues 44 to 153 of 173 from GenPept : >gb|AAL08463.1|AF326777_38 (AF326777) unknown [Shigella flexneri 2a]; hypothetical protein	complement(3067962..3068387)	Shigella flexneri 2a str. 2457T	1079442
NP_838469.1	CDS	S3186	NC_004741.1	3068384	3068767	R	residues 1 to 127 of 127 are 100.00 pct identical to residues 1 to 127 of 127 from GenPept : >gb|AAK00467.1| (AF200692) unknown [Shigella flexneri 2a]; hypothetical protein	complement(3068384..3068767)	Shigella flexneri 2a str. 2457T	1079443
NP_838470.1	CDS	S3187	NC_004741.1	3069140	3069739	R	residues 80 to 199 of 199 are 100.00 pct identical to residues 1 to 120 of 120 from GenPept : >gb|AAK00468.1| (AF200692) unknown [Shigella flexneri 2a]; hypothetical protein	complement(3069140..3069739)	Shigella flexneri 2a str. 2457T	1079444
NP_838471.2	CDS	S3188	NC_004741.1	3070456	3070821	D	IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats; insertion sequence 2 OrfA protein	3070456..3070821	Shigella flexneri 2a str. 2457T	1079445
NP_838472.2	CDS	S3189	NC_004741.1	3070779	3071684	D	IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats; insertion element IS2 transposase InsD	3070779..3071684	Shigella flexneri 2a str. 2457T	1079446
NP_838473.1	CDS	S3190	NC_004741.1	3073538	3073744	D	residues 1 to 68 of 68 are 89.70 pct identical to residues 25 to 92 of 92 from GenPept : >gb|AAL08466.1| (AF326777) unknown [Shigella flexneri 2a]; hypothetical protein	3073538..3073744	Shigella flexneri 2a str. 2457T	1079447
NP_838474.1	CDS	S3191	NC_004741.1	3073830	3074402	D	residues 19 to 190 of 190 are 92.44 pct identical to residues 1 to 172 of 172 from GenPept : >gb|AAK00471.1| (AF200692) unknown [Shigella flexneri 2a]; hypothetical protein	3073830..3074402	Shigella flexneri 2a str. 2457T	1079448
NP_838475.1	CDS	S4825	NC_004741.1	3074404	3074688	R	no significant similarities; hypothetical protein	complement(3074404..3074688)	Shigella flexneri 2a str. 2457T	1079449
NP_838476.1	CDS	S4826	NC_004741.1	3075971	3076990	D	residues 1 to 339 of 339 are 100.00 pct identical to residues 1 to 339 of 339 from NRprotein_Feb03 : >ref|NP_708763.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gb|AAN44470.1|AE015312_3 orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]; hypothetical protein	3075971..3076990	Shigella flexneri 2a str. 2457T	1079450
NP_838477.1	CDS	sap	NC_004741.1	3077100	3077972	D	residues 1 to 290 of 290 are 99.65 pct identical to residues 1 to 290 of 290 from GenPept : >gb|AAK00473.1| (AF200692) unknown [Shigella flexneri 2a]; hypothetical protein	3077100..3077972	Shigella flexneri 2a str. 2457T	1079451
NP_838478.1	CDS	S3194	NC_004741.1	3078306	3079199	D	residues 1 to 293 of 297 are 64.16 pct identical to residues 53 to 344 of 1091 from Escherichia coli K-12 : B2000; similar to adhesin; outer membrane fluffing protein	3078306..3079199	Shigella flexneri 2a str. 2457T	1079452
NP_838479.1	CDS	S3195	NC_004741.1	3079305	3081425	D	residues 1 to 706 of 706 are 92.77 pct identical to residues 386 to 1091 of 1091 from Escherichia coli K-12 : B2000; similar to adhesin; outer membrane fluffing protein	3079305..3081425	Shigella flexneri 2a str. 2457T	1079668
NP_838480.1	CDS	S3196	NC_004741.1	3081546	3084062	D	residues 1 to 507 of 838 are 85.99 pct identical to residues 3 to 509 of 512 from Escherichia coli K-12 : B2001; hypothetical protein	3081546..3084062	Shigella flexneri 2a str. 2457T	1076492
NP_838481.1	CDS	S3197	NC_004741.1	3084138	3084593	D	residues 9 to 151 of 151 are 99.30 pct identical to residues 1 to 143 of 143 from GenPept : >gb|AAK00476.1| (AF200692) unknown [Shigella flexneri 2a]; hypothetical protein	3084138..3084593	Shigella flexneri 2a str. 2457T	1079453
NP_838482.1	CDS	S3199	NC_004741.1	3085004	3085822	D	residues 1 to 272 of 272 are 89.37 pct identical to residues 1 to 273 of 273 from GenPept : >dbj|BAB36224.1| (AP002559) hypothetical protein [Escherichia coli O157:H7]; hypothetical protein	3085004..3085822	Shigella flexneri 2a str. 2457T	1079454
NP_838483.1	CDS	S3200	NC_004741.1	3086164	3086637	D	residues 1 to 157 of 157 are 99.36 pct identical to residues 115 to 271 of 271 from GenPept : >gb|AAK00478.1| (AF200692) unknown [Shigella flexneri 2a]; hypothetical protein	3086164..3086637	Shigella flexneri 2a str. 2457T	1079455
NP_838484.1	CDS	yeeS	NC_004741.1	3086638	3087129	D	residues 16 to 163 of 163 are 85.81 pct identical to residues 1 to 148 of 148 from Escherichia coli K-12 : B2002; RADC family DNA repair protein	3086638..3087129	Shigella flexneri 2a str. 2457T	1079456
NP_838485.1	CDS	yeeT	NC_004741.1	3087216	3087437	D	residues 1 to 73 of 73 are 93.15 pct identical to residues 1 to 73 of 73 from Escherichia coli K-12 : B2003; hypothetical protein	3087216..3087437	Shigella flexneri 2a str. 2457T	1079457
NP_838486.1	CDS	yeeU	NC_004741.1	3087517	3087894	D	residues 1 to 107 of 125 are 94.39 pct identical to residues 1 to 107 of 122 from Escherichia coli K-12 : B2004; structural protein	3087517..3087894	Shigella flexneri 2a str. 2457T	1079458
NP_838487.1	CDS	yeeV	NC_004741.1	3087941	3088318	D	residues 1 to 124 of 125 are 85.48 pct identical to residues 1 to 124 of 124 from Escherichia coli K-12 : B2005; hypothetical protein	3087941..3088318	Shigella flexneri 2a str. 2457T	1079459
NP_838488.1	CDS	yeeW	NC_004741.1	3088315	3088803	D	residues 5 to 52 of 162 are 79.16 pct identical to residues 2 to 49 of 64 from Escherichia coli K-12 : B2006; hypothetical protein	3088315..3088803	Shigella flexneri 2a str. 2457T	1079460
NP_838489.1	CDS	S3207	NC_004741.1	3089105	3089947	D	residues 1 to 280 of 280 are 100.00 pct identical to residues 1 to 280 of 280 from GenPept : >gb|AAK00485.1| (AF200692) unknown [Shigella flexneri 2a]; hypothetical protein	3089105..3089947	Shigella flexneri 2a str. 2457T	1079463
NP_838490.1	CDS	S3209	NC_004741.1	3091372	3091671	D	residues 1 to 99 of 99 are 100.00 pct identical to residues 1 to 99 of 99 from GenPept : >gb|AAL57580.1|AF453442_9 (AF453442) transposase 2 [Escherichia coli]; IS3 orfA	3091372..3091671	Shigella flexneri 2a str. 2457T	1079464
NP_838491.1	CDS	S3210	NC_004741.1	3091668	3092534	D	residues 1 to 288 of 288 are 99.30 pct identical to residues 1 to 288 of 288 from GenPept : >gb|AAL57519.1|AF453441_3 (AF453441) transposase 1 [Escherichia coli]; IS3 orfB	3091668..3092534	Shigella flexneri 2a str. 2457T	1079465
NP_838492.1	CDS	S3211	NC_004741.1	3093171	3093410	R	no significant similarities; hypothetical protein	complement(3093171..3093410)	Shigella flexneri 2a str. 2457T	1079466
NP_838493.1	CDS	S3212	NC_004741.1	3093545	3094150	R	no significant similarities; hypothetical protein	complement(3093545..3094150)	Shigella flexneri 2a str. 2457T	1079467
NP_838494.1	CDS	S3213	NC_004741.1	3094265	3094768	R	residues 3 to 97 of 97 are 83.15 pct identical to residues 73 to 167 of 167 from GenPept : >gb|AAK18549.1|AF348706_238 (AF348706) iso-IS1 orfB [Shigella flexneri]; IS1 orfB	complement(3094265..3094768)	Shigella flexneri 2a str. 2457T	1076474
NP_838495.1	CDS	S3214	NC_004741.1	3094687	3094962	R	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(3094687..3094962)	Shigella flexneri 2a str. 2457T	1079468
NP_838496.1	CDS	yghK	NC_004741.1	3096365	3097951	R	residues 1 to 528 of 528 are 79.82 pct identical to residues 1 to 560 of 560 from Escherichia coli K-12 : B2975; permease	complement(3096365..3097951)	Shigella flexneri 2a str. 2457T	1079470
NP_838497.1	CDS	glcB	NC_004741.1	3098306	3100477	R	catalyzes the formation of malate from glyoxylate and acetyl-CoA; malate synthase G	complement(3098306..3100477)	Shigella flexneri 2a str. 2457T	1079471
NP_838498.1	CDS	glcG	NC_004741.1	3100499	3100903	R	residues 1 to 118 of 134 are 100.00 pct identical to residues 1 to 118 of 134 from Escherichia coli K-12 : B2977; hypothetical protein	complement(3100499..3100903)	Shigella flexneri 2a str. 2457T	1079472
NP_838499.1	CDS	glcC	NC_004741.1	3104940	3105710	D	residues 1 to 252 of 256 are 98.41 pct identical to residues 1 to 252 of 254 from Escherichia coli K-12 : B2980; DNA-binding transcriptional regulator GlcC	3104940..3105710	Shigella flexneri 2a str. 2457T	1079476
NP_838500.1	CDS	S3222	NC_004741.1	3107379	3109067	D	activates fatty acids by binding to coenzyme A; acyl-CoA synthetase	3107379..3109067	Shigella flexneri 2a str. 2457T	1079478
NP_838501.1	CDS	S3223	NC_004741.1	3109082	3109978	D	residues 1 to 281 of 298 are 32.74 pct identical to residues 11 to 288 of 317 from GenPept : >gb|AAK23148.1| (AE005794) conserved hypothetical protein [Caulobacter crescentus CB15]; hypothetical protein	3109082..3109978	Shigella flexneri 2a str. 2457T	1080726
NP_838502.1	CDS	S3224	NC_004741.1	3110011	3110259	D	no significant similarities; hypothetical protein	3110011..3110259	Shigella flexneri 2a str. 2457T	1079479
NP_838503.1	CDS	S3225	NC_004741.1	3110259	3110609	D	residues 1 to 109 of 116 are 41.28 pct identical to residues 1 to 109 of 404 from GenPept : >gb|AAK23146.1| (AE005794) aminotransferase, class II [Caulobacter crescentus CB15]; partial; class II aminotransferase	3110259..3110609	Shigella flexneri 2a str. 2457T	1079486
NP_838504.1	CDS	S3226	NC_004741.1	3110642	3111430	D	residues 2 to 260 of 262 are 51.53 pct identical to residues 130 to 389 of 404 from GenPept : >gb|AAK23146.1| (AE005794) aminotransferase, class II [Caulobacter crescentus CB15]; partial; class II aminotransferase	3110642..3111430	Shigella flexneri 2a str. 2457T	1079480
NP_838505.1	CDS	S3227	NC_004741.1	3111466	3112545	R	residues 3 to 352 of 359 are 28.61 pct identical to residues 4 to 354 of 358 from GenPept : >emb|CAC92669.1| (AJ414157)  membrane protein [Yersinia pestis]; hypothetical protein	complement(3111466..3112545)	Shigella flexneri 2a str. 2457T	1079482
NP_838506.1	CDS	S3228	NC_004741.1	3112542	3113612	R	residues 34 to 342 of 356 are 28.66 pct identical to residues 33 to 350 of 372 from GenPept : >gb|AAG07215.1|AE004800_4 (AE004800) conserved hypothetical protein [Pseudomonas aeruginosa]; hypothetical protein	complement(3112542..3113612)	Shigella flexneri 2a str. 2457T	1079484
NP_838507.1	CDS	S3229	NC_004741.1	3113643	3114203	R	residues 20 to 184 of 186 are 56.36 pct identical to residues 20 to 183 of 184 from GenPept : >gb|AAL01384.1|AF407017_1 (AF407017) periplasmic protein [Escherichia coli]; hypothetical protein	complement(3113643..3114203)	Shigella flexneri 2a str. 2457T	1076473
NP_838508.1	CDS	S3230	NC_004741.1	3114215	3115039	R	no significant similarities; hypothetical protein	complement(3114215..3115039)	Shigella flexneri 2a str. 2457T	1079485
NP_838509.1	CDS	yghQ	NC_004741.1	3115039	3116388	R	residues 45 to 355 of 449 are 92.92 pct identical to residues 15 to 325 of 325 from Escherichia coli K-12 : B2983; hypothetical protein	complement(3115039..3116388)	Shigella flexneri 2a str. 2457T	1078248
NP_838510.1	CDS	yghR	NC_004741.1	3116434	3117192	R	residues 1 to 252 of 252 are 92.85 pct identical to residues 1 to 252 of 252 from Escherichia coli K-12 : B2984; hypothetical protein	complement(3116434..3117192)	Shigella flexneri 2a str. 2457T	1079487
NP_838511.1	CDS	yghS	NC_004741.1	3117224	3117937	R	residues 1 to 237 of 237 are 97.46 pct identical to residues 1 to 237 of 237 from Escherichia coli K-12 : B2985; hypothetical protein	complement(3117224..3117937)	Shigella flexneri 2a str. 2457T	1079549
NP_838512.1	CDS	yghT	NC_004741.1	3118111	3118803	D	residues 1 to 230 of 230 are 99.56 pct identical to residues 1 to 230 of 230 from Escherichia coli K-12 : B2986; hypothetical protein	3118111..3118803	Shigella flexneri 2a str. 2457T	1079488
NP_838513.1	CDS	pitB	NC_004741.1	3118852	3120351	R	residues 1 to 499 of 499 are 89.17 pct identical to residues 1 to 499 of 499 from Escherichia coli K-12 : B2987; low-affinity phosphate transport protein	complement(3118852..3120351)	Shigella flexneri 2a str. 2457T	1079489
NP_838514.1	CDS	gsp	NC_004741.1	3120643	3122502	R	catalyzes the formation of glutathionylspermidine from glutathione and spermidine; also catalyzes the reverse reaction; bifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase	complement(3120643..3122502)	Shigella flexneri 2a str. 2457T	1079490
NP_838515.1	CDS	S3237	NC_004741.1	3122659	3123573	D	YghU; B2989; one of eight  glutathione transferase proteins from E. coli; glutathione S-transferase	3122659..3123573	Shigella flexneri 2a str. 2457T	1079491
NP_838516.1	CDS	hybG	NC_004741.1	3123696	3123944	R	residues 1 to 82 of 82 are 100.00 pct identical to residues 1 to 82 of 82 from Escherichia coli K-12 : B2990; may effect maturation of large subunit of hydrogenase-2; hydrogenase 2 accessory protein HypG	complement(3123696..3123944)	Shigella flexneri 2a str. 2457T	1079492
NP_838517.1	CDS	hypA	NC_004741.1	3124078	3124419	R	plays a role in hydrogenase nickel cofactor insertion; hydrogenase nickel incorporation protein HybF	complement(3124078..3124419)	Shigella flexneri 2a str. 2457T	1079493
NP_838518.1	CDS	hybE	NC_004741.1	3124412	3124900	R	residues 1 to 162 of 162 are 91.97 pct identical to residues 1 to 162 of 162 from Escherichia coli K-12 : B2992; hydrogenase 2-specific chaperone	complement(3124412..3124900)	Shigella flexneri 2a str. 2457T	1079494
NP_838519.1	CDS	hybD	NC_004741.1	3124893	3125387	R	protease responsible for the cleavage of a 15 amino acid peptide from the C-terminal end of the large subunit of hydrogenase 2 (HybC); hydrogenase 2 maturation endopeptidase	complement(3124893..3125387)	Shigella flexneri 2a str. 2457T	1079495
NP_838520.1	CDS	hybC	NC_004741.1	3125387	3127090	R	involved in hydrogen uptake; hydrogenase 2 large subunit	complement(3125387..3127090)	Shigella flexneri 2a str. 2457T	1079496
NP_838521.1	CDS	hybB	NC_004741.1	3127087	3128265	R	HybB; cytochrome b subunit of the hydrogenase 2 enzyme, composed of HybA, B, C, and O subunits; hydrogenase 2 b cytochrome subunit	complement(3127087..3128265)	Shigella flexneri 2a str. 2457T	1079497
NP_838522.1	CDS	hybA	NC_004741.1	3128255	3129241	R	Fe-S ferrodoxin type component; participates in the periplasmic electron-transferring activity of hydrogenase 2; hydrogenase 2 protein HybA	complement(3128255..3129241)	Shigella flexneri 2a str. 2457T	1079498
NP_838523.1	CDS	S3245	NC_004741.1	3129244	3130362	R	involved in hydrogen uptake; hydrogenase 2 small subunit	complement(3129244..3130362)	Shigella flexneri 2a str. 2457T	1079503
NP_838524.1	CDS	S3246	NC_004741.1	3130551	3130838	R	residues 1 to 95 of 95 are 100.00 pct identical to residues 1 to 95 of 95 from Escherichia coli K-12 : B2998; hypothetical protein	complement(3130551..3130838)	Shigella flexneri 2a str. 2457T	1079499
NP_838525.1	CDS	S3247	NC_004741.1	3130957	3131367	R	residues 1 to 136 of 136 are 98.52 pct identical to residues 1 to 136 of 136 from Escherichia coli K-12 : B2999; hypothetical protein	complement(3130957..3131367)	Shigella flexneri 2a str. 2457T	1079500
NP_838526.1	CDS	S3249	NC_004741.1	3132001	3133041	D	residues 1 to 346 of 346 are 99.42 pct identical to residues 1 to 346 of 346 from Escherichia coli K-12 : B3001; aldo-keto reductase	3132001..3133041	Shigella flexneri 2a str. 2457T	1079502
NP_838527.1	CDS	yqhA	NC_004741.1	3133081	3133575	R	residues 1 to 164 of 164 are 92.07 pct identical to residues 1 to 164 of 164 from Escherichia coli K-12 : B3002; hypothetical protein	complement(3133081..3133575)	Shigella flexneri 2a str. 2457T	1079504
NP_838528.1	CDS	yghA	NC_004741.1	3133766	3134650	D	residues 1 to 294 of 294 are 93.87 pct identical to residues 1 to 294 of 294 from Escherichia coli K-12 : B3003; oxidoreductase	3133766..3134650	Shigella flexneri 2a str. 2457T	1079505
NP_838529.1	CDS	S3252	NC_004741.1	3134826	3135071	D	residues 1 to 81 of 81 are 100.00 pct identical to residues 1 to 81 of 81 from Escherichia coli K-12 : B3004; hypothetical protein	3134826..3135071	Shigella flexneri 2a str. 2457T	1079506
NP_838530.1	CDS	exbD	NC_004741.1	3134922	3135347	R	membrane spanning protein in TonB-ExbB-ExbD complex; involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell; biopolymer transport protein ExbD	complement(3134922..3135347)	Shigella flexneri 2a str. 2457T	1079507
NP_838531.1	CDS	exbB	NC_004741.1	3135354	3136088	R	membrane spanning protein in TonB-ExbB-ExbD complex; involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell; biopolymer transport protein ExbB	complement(3135354..3136088)	Shigella flexneri 2a str. 2457T	1080948
NP_838532.1	CDS	S3255	NC_004741.1	3136081	3136236	R	residues 1 to 51 of 51 are 100.00 pct identical to residues 1 to 51 of 51 from Escherichia coli K-12 : B3007; hypothetical protein	complement(3136081..3136236)	Shigella flexneri 2a str. 2457T	1079508
NP_838533.1	CDS	metC	NC_004741.1	3136340	3137527	D	catalyzes the formation of L-homocysteine from cystathionine; cystathionine beta-lyase	3136340..3137527	Shigella flexneri 2a str. 2457T	1079509
NP_838534.1	CDS	yghB	NC_004741.1	3137667	3138326	D	residues 1 to 219 of 219 are 84.01 pct identical to residues 1 to 219 of 219 from Escherichia coli K-12 : B3009; hypothetical protein	3137667..3138326	Shigella flexneri 2a str. 2457T	1079510
NP_838535.1	CDS	yqhC	NC_004741.1	3138366	3139493	R	residues 1 to 375 of 375 are 99.73 pct identical to residues 1 to 375 of 375 from Escherichia coli K-12 : B3010; ARAC-type regulatory protein	complement(3138366..3139493)	Shigella flexneri 2a str. 2457T	1079512
NP_838536.1	CDS	yqhD	NC_004741.1	3139459	3140622	D	residues 1 to 387 of 387 are 99.48 pct identical to residues 1 to 387 of 387 from Escherichia coli K-12 : B3011; oxidoreductase	3139459..3140622	Shigella flexneri 2a str. 2457T	1079513
NP_838537.2	CDS	dkgA	NC_004741.1	3140727	3141554	D	methylglyoxal reductase/#-keto ester reductase; catalyzes the reduction of 2,5-diketo-D-gluconic acid to 2-keto-L-gulonic acid; also catalyzes the reduction of methylglyoxal, ethyl-2-methylacetoacetate and ethyl-acetoacetate; 2,5-diketo-D-gluconate reductase A	3140727..3141554	Shigella flexneri 2a str. 2457T	1077738
NP_838538.1	CDS	yqhG	NC_004741.1	3141754	3142680	D	residues 1 to 308 of 308 are 95.46 pct identical to residues 1 to 309 of 309 from Escherichia coli K-12 : B3013; hypothetical protein	3141754..3142680	Shigella flexneri 2a str. 2457T	1077754
NP_838539.1	CDS	yqhH	NC_004741.1	3142731	3142988	D	residues 1 to 85 of 85 are 100.00 pct identical to residues 1 to 85 of 85 from Escherichia coli K-12 : B3014; outer membrane lipoprotein	3142731..3142988	Shigella flexneri 2a str. 2457T	1079514
NP_838540.1	CDS	S3263	NC_004741.1	3143031	3144272	R	residues 1 to 413 of 413 are 99.51 pct identical to residues 1 to 413 of 413 from Escherichia coli K-12 : B3015; hypothetical protein	complement(3143031..3144272)	Shigella flexneri 2a str. 2457T	1079515
NP_838541.1	CDS	sufI	NC_004741.1	3145361	3146773	R	residues 1 to 470 of 470 are 92.34 pct identical to residues 1 to 470 of 470 from Escherichia coli K-12 : B3017; repressor protein for FtsI	complement(3145361..3146773)	Shigella flexneri 2a str. 2457T	1079517
NP_838542.1	CDS	plsC	NC_004741.1	3146848	3147585	R	residues 1 to 245 of 245 are 94.69 pct identical to residues 1 to 245 of 245 from Escherichia coli K-12 : B3018; 1-acyl-sn-glycerol-3-phosphate acyltransferase	complement(3146848..3147585)	Shigella flexneri 2a str. 2457T	1079518
NP_838543.1	CDS	parC	NC_004741.1	3147819	3150077	R	decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A	complement(3147819..3150077)	Shigella flexneri 2a str. 2457T	1076484
NP_838544.1	CDS	S3268	NC_004741.1	3150623	3151105	R	residues 1 to 160 of 160 are 97.50 pct identical to residues 1 to 160 of 160 from Escherichia coli K-12 : B3023; hypothetical protein	complement(3150623..3151105)	Shigella flexneri 2a str. 2457T	1079521
NP_838545.1	CDS	ygiW	NC_004741.1	3151158	3151550	R	residues 1 to 130 of 130 are 99.23 pct identical to residues 1 to 130 of 130 from Escherichia coli K-12 : B3024; hypothetical protein	complement(3151158..3151550)	Shigella flexneri 2a str. 2457T	1077781
NP_838546.1	CDS	ygiX	NC_004741.1	3151702	3152361	D	response regulator in two-component regulatory system with QseC; regulates FlhCD which is the master regulator for flagella and motility genes; DNA-binding transcriptional regulator QseB	3151702..3152361	Shigella flexneri 2a str. 2457T	1077766
NP_838547.1	CDS	ygiY	NC_004741.1	3152358	3153632	D	residues 1 to 424 of 424 are 89.08 pct identical to residues 1 to 449 of 449 from Escherichia coli K-12 : B3026; sensor protein QseC	3152358..3153632	Shigella flexneri 2a str. 2457T	1079522
NP_838548.1	CDS	S3272	NC_004741.1	3153678	3154010	R	residues 1 to 110 of 110 are 86.36 pct identical to residues 1 to 110 of 110 from Escherichia coli K-12 : B3027; hypothetical protein	complement(3153678..3154010)	Shigella flexneri 2a str. 2457T	1079525
NP_838549.1	CDS	mdaB	NC_004741.1	3154329	3154910	D	residues 1 to 193 of 193 are 98.44 pct identical to residues 1 to 193 of 193 from Escherichia coli K-12 : B3028; modulator of drug activity B	3154329..3154910	Shigella flexneri 2a str. 2457T	1079526
NP_838550.1	CDS	ygiN	NC_004741.1	3154941	3155255	D	residues 1 to 104 of 104 are 100.00 pct identical to residues 1 to 104 of 104 from Escherichia coli K-12 : B3029; hypothetical protein	3154941..3155255	Shigella flexneri 2a str. 2457T	1079527
NP_838551.1	CDS	parE	NC_004741.1	3155303	3157195	R	decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B	complement(3155303..3157195)	Shigella flexneri 2a str. 2457T	1079528
NP_838552.1	CDS	yqiA	NC_004741.1	3157224	3157805	R	Displays esterase activity toward palmitoyl-CoA and pNP-butyrate; esterase YqiA	complement(3157224..3157805)	Shigella flexneri 2a str. 2457T	1079529
NP_838553.1	CDS	icc	NC_004741.1	3157805	3158632	R	residues 1 to 275 of 275 are 95.99 pct identical to residues 1 to 275 of 275 from Escherichia coli K-12 : B3032; cyclic 3',5'-adenosine monophosphate phosphodiesterase	complement(3157805..3158632)	Shigella flexneri 2a str. 2457T	1077772
NP_838554.1	CDS	yqiB	NC_004741.1	3158657	3159079	R	residues 1 to 140 of 140 are 100.00 pct identical to residues 1 to 140 of 140 from Escherichia coli K-12 : B3033; hypothetical protein	complement(3158657..3159079)	Shigella flexneri 2a str. 2457T	1079530
NP_838555.1	CDS	nudF	NC_004741.1	3159080	3159709	R	ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose; ADP-ribose pyrophosphatase NudF	complement(3159080..3159709)	Shigella flexneri 2a str. 2457T	1080971
NP_838556.1	CDS	tolC	NC_004741.1	3159914	3161395	D	trimeric outer membrane protein involved in efflux of hydrophobic/amphipathic molecules; functions with a number of efflux systems in the inner membrane to transport molecules out of the cell; outer membrane channel protein	3159914..3161395	Shigella flexneri 2a str. 2457T	1080970
NP_838557.1	CDS	ygiA	NC_004741.1	3161395	3161655	D	residues 1 to 86 of 86 are 100.00 pct identical to residues 1 to 86 of 86 from Escherichia coli K-12 : B3036; hypothetical protein	3161395..3161655	Shigella flexneri 2a str. 2457T	1080969
NP_838558.2	CDS	ygiB	NC_004741.1	3161543	3162214	D	residues 1 to 234 of 234 are 92.30 pct identical to residues 1 to 234 of 234 from Escherichia coli K-12 : B3037; hypothetical protein	3161543..3162214	Shigella flexneri 2a str. 2457T	1079531
NP_838559.1	CDS	ygiC	NC_004741.1	3162220	3163380	D	residues 1 to 386 of 386 are 99.74 pct identical to residues 1 to 386 of 386 from Escherichia coli K-12 : B3038; synthetase/amidase	3162220..3163380	Shigella flexneri 2a str. 2457T	1079532
NP_838560.1	CDS	ygiD	NC_004741.1	3163418	3164233	R	seems to be involved in biofilm formation; in asymptomatic bacteriuria E. coli strains 83972 and VR50, the ygiD gene is upregulated during biofilm formation in urine; hypothetical protein	complement(3163418..3164233)	Shigella flexneri 2a str. 2457T	1079533
NP_838561.1	CDS	ygiE	NC_004741.1	3164349	3165122	D	residues 1 to 257 of 257 are 88.71 pct identical to residues 1 to 257 of 257 from Escherichia coli K-12 : B3040; zinc transporter ZupT	3164349..3165122	Shigella flexneri 2a str. 2457T	1077767
NP_838562.1	CDS	ribB	NC_004741.1	3165611	3166264	R	DHBP synthase; functions during riboflavin biosynthesis; 3,4-dihydroxy-2-butanone 4-phosphate synthase	complement(3165611..3166264)	Shigella flexneri 2a str. 2457T	1079534
NP_838563.1	CDS	S3287	NC_004741.1	3166578	3166928	D	residues 1 to 116 of 116 are 99.13 pct identical to residues 1 to 116 of 116 from Escherichia coli K-12 : B3042; hypothetical protein	3166578..3166928	Shigella flexneri 2a str. 2457T	1079535
NP_838564.2	CDS	S3288	NC_004741.1	3167184	3167549	D	IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats; insertion sequence 2 OrfA protein	3167184..3167549	Shigella flexneri 2a str. 2457T	1079536
NP_838565.2	CDS	S3289	NC_004741.1	3167507	3168358	D	IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats; insertion sequence 2 OrfB protein	3167507..3168358	Shigella flexneri 2a str. 2457T	1079537
NP_838566.1	CDS	S3290	NC_004741.1	3168409	3168684	D	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	3168409..3168684	Shigella flexneri 2a str. 2457T	1080975
NP_838567.1	CDS	S3291	NC_004741.1	3168603	3169106	D	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri]; IS1 orfB	3168603..3169106	Shigella flexneri 2a str. 2457T	1079538
NP_838568.1	CDS	S3292	NC_004741.1	3169116	3169391	D	residues 1 to 91 of 91 are 97.80 pct identical to residues 358 to 448 of 448 from GenPept : >gb|AAK18333.1|AF348706_22 (AF348706) IS4 orf [Shigella flexneri]; IS4 orf	3169116..3169391	Shigella flexneri 2a str. 2457T	1079539
NP_838569.1	CDS	glgS	NC_004741.1	3169778	3169978	R	Involved in glycogen synthesis. May be involved in glycogen priming; glycogen synthesis protein GlgS	complement(3169778..3169978)	Shigella flexneri 2a str. 2457T	1077783
NP_838570.1	CDS	S3295	NC_004741.1	3170300	3170599	D	residues 1 to 85 of 99 are 100.00 pct identical to residues 1 to 85 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	3170300..3170599	Shigella flexneri 2a str. 2457T	1078323
NP_838571.1	CDS	S3298	NC_004741.1	3173108	3174541	R	catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D,D-heptose-1,7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D,D-heptose; bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase	complement(3173108..3174541)	Shigella flexneri 2a str. 2457T	1079582
NP_838572.1	CDS	glnE	NC_004741.1	3174589	3177429	R	catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase	complement(3174589..3177429)	Shigella flexneri 2a str. 2457T	1079543
NP_838573.1	CDS	ygiF	NC_004741.1	3177452	3178753	R	residues 1 to 433 of 433 are 93.53 pct identical to residues 1 to 433 of 433 from Escherichia coli K-12 : B3054; hypothetical protein	complement(3177452..3178753)	Shigella flexneri 2a str. 2457T	1079544
NP_838574.1	CDS	ygiM	NC_004741.1	3178995	3179615	D	residues 1 to 206 of 206 are 87.37 pct identical to residues 1 to 206 of 206 from Escherichia coli K-12 : B3055; signal transduction protein	3178995..3179615	Shigella flexneri 2a str. 2457T	1079545
NP_838575.1	CDS	cca	NC_004741.1	3179679	3180917	D	catalyzes the addition and repair of the essential 3'-terminal CCA sequence in tRNAs without using a nucleic acid template; phosphohydrolase activities include hydrolysis of pyrophosphate, 5'-nucleoside tri- and diphosphates, NADP, and 2'-AMP with the production of Pi, metal-dependent phosphodiesterase activity for 2',3'-cAMP, 2',3'-cGMP, and 2',3'-cCMP, and hydrolysis 2',3'-cyclic substrates with the formation of 2'-nucleotides and 3'-nucleotides; these phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases; multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase	3179679..3180917	Shigella flexneri 2a str. 2457T	1078289
NP_838576.1	CDS	uppP	NC_004741.1	3181079	3181900	R	BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase	complement(3181079..3181900)	Shigella flexneri 2a str. 2457T	1079546
NP_838577.1	CDS	folB	NC_004741.1	3181991	3182359	R	catalyzes the conversion of 7,8-dihydroneopterin to 6-hydroxymethyl-7,8-dihydropterin and can also catalyze the epimerization of carbon 2' of dihydroneopterin and dihydromonapterin; bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase	complement(3181991..3182359)	Shigella flexneri 2a str. 2457T	1076577
NP_838578.1	CDS	ygiH	NC_004741.1	3182464	3183081	D	involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX; glycerol-3-phosphate acyltransferase PlsY	3182464..3183081	Shigella flexneri 2a str. 2457T	1079547
NP_838579.1	CDS	ygiP	NC_004741.1	3183024	3184025	R	activates expression of genes required for L-tartrate-dependent anaerobic growth on glycerol; transcriptional activator TtdR	complement(3183024..3184025)	Shigella flexneri 2a str. 2457T	1078105
NP_838580.1	CDS	ttdA	NC_004741.1	3184235	3185044	D	Involved in the tartrate degradation pathway; tartrate dehydratase subunit alpha	3184235..3185044	Shigella flexneri 2a str. 2457T	1079550
NP_838581.1	CDS	ttdB	NC_004741.1	3185072	3185677	D	Involved in the tartrate degradation pathway; L(+)-tartrate dehydratase subunit beta	3185072..3185677	Shigella flexneri 2a str. 2457T	1079551
NP_838582.1	CDS	ygjE	NC_004741.1	3185725	3187188	D	residues 1 to 487 of 487 are 82.95 pct identical to residues 1 to 487 of 487 from Escherichia coli K-12 : B3063; hypothetical protein	3185725..3187188	Shigella flexneri 2a str. 2457T	1079552
NP_838583.1	CDS	ygjD	NC_004741.1	3187231	3188244	R	in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease	complement(3187231..3188244)	Shigella flexneri 2a str. 2457T	1079554
NP_838584.1	CDS	rpsU	NC_004741.1	3188482	3188697	D	a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21	3188482..3188697	Shigella flexneri 2a str. 2457T	1079555
NP_838585.1	CDS	dnaG	NC_004741.1	3188808	3190553	D	synthesizes RNA primers at the replication forks; DNA primase	3188808..3190553	Shigella flexneri 2a str. 2457T	1079556
NP_838586.1	CDS	rpoD	NC_004741.1	3190748	3192574	D	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD	3190748..3192574	Shigella flexneri 2a str. 2457T	1079047
NP_838587.1	CDS	S3314	NC_004741.1	3192746	3194074	D	residues 1 to 442 of 442 are 99.77 pct identical to residues 7 to 448 of 448 from GenPept : >gb|AAK18333.1|AF348706_22 (AF348706) IS4 orf [Shigella flexneri]; IS4 orf	3192746..3194074	Shigella flexneri 2a str. 2457T	1079638
NP_838588.1	CDS	yqjI	NC_004741.1	3195888	3196511	D	residues 1 to 207 of 207 are 83.09 pct identical to residues 1 to 207 of 207 from Escherichia coli K-12 : B3071; hypothetical protein	3195888..3196511	Shigella flexneri 2a str. 2457T	1079560
NP_838589.2	CDS	ygjG	NC_004741.1	3198576	3199982	D	catalyzes the formation of 4-aminobutyraldehyde from putrescine and 2-oxoglutarate; putrescine--2-oxoglutarate aminotransferase	3198576..3199982	Shigella flexneri 2a str. 2457T	1077735
NP_838590.1	CDS	ebgR	NC_004741.1	3200573	3201556	D	residues 1 to 327 of 327 are 99.38 pct identical to residues 1 to 327 of 327 from Escherichia coli K-12 : B3075; DNA-binding transcriptional repressor EbgR	3200573..3201556	Shigella flexneri 2a str. 2457T	1079563
NP_838591.1	CDS	ebgA	NC_004741.1	3201739	3204825	D	in Escherichia coli this is the second beta-galactosidase system; cryptic beta-D-galactosidase subunit alpha	3201739..3204825	Shigella flexneri 2a str. 2457T	1079564
NP_838592.1	CDS	ebgC	NC_004741.1	3204822	3205271	D	in Escherichia coli this is the second beta-galactosidase system; cryptic beta-D-galactosidase subunit beta	3204822..3205271	Shigella flexneri 2a str. 2457T	1079565
NP_838593.1	CDS	ygjI	NC_004741.1	3205334	3206767	D	residues 1 to 477 of 477 are 92.03 pct identical to residues 1 to 477 of 477 from Escherichia coli K-12 : B3078; oxidoreductase	3205334..3206767	Shigella flexneri 2a str. 2457T	1079566
NP_838594.1	CDS	ygjK	NC_004741.1	3207989	3210340	D	residues 1 to 783 of 783 are 95.65 pct identical to residues 1 to 783 of 783 from Escherichia coli K-12 : B3080; glycosyl hydrolase	3207989..3210340	Shigella flexneri 2a str. 2457T	1079567
NP_838595.1	CDS	ygjL	NC_004741.1	3210566	3212584	D	residues 1 to 672 of 672 are 95.23 pct identical to residues 1 to 672 of 672 from Escherichia coli K-12 : B3081; NADPH dehydrogenase	3210566..3212584	Shigella flexneri 2a str. 2457T	1079568
NP_838596.1	CDS	ygjM	NC_004741.1	3212629	3213045	R	residues 1 to 138 of 138 are 90.57 pct identical to residues 1 to 138 of 138 from Escherichia coli K-12 : B3082; hypothetical protein	complement(3212629..3213045)	Shigella flexneri 2a str. 2457T	1077095
NP_838597.1	CDS	ygjN	NC_004741.1	3213042	3213356	R	residues 1 to 104 of 104 are 100.00 pct identical to residues 1 to 104 of 104 from Escherichia coli K-12 : B3083; hypothetical protein	complement(3213042..3213356)	Shigella flexneri 2a str. 2457T	1079569
NP_838598.1	CDS	ygjO	NC_004741.1	3213641	3214777	R	residues 1 to 378 of 378 are 95.76 pct identical to residues 11 to 388 of 388 from Escherichia coli K-12 : B3084; enzyme	complement(3213641..3214777)	Shigella flexneri 2a str. 2457T	1078756
NP_838599.1	CDS	ygjP	NC_004741.1	3214826	3215365	D	residues 1 to 179 of 179 are 98.32 pct identical to residues 1 to 179 of 179 from Escherichia coli K-12 : B3085; hypothetical protein	3214826..3215365	Shigella flexneri 2a str. 2457T	1079570
NP_838600.1	CDS	ygjQ	NC_004741.1	3215442	3216134	D	residues 1 to 230 of 230 are 97.82 pct identical to residues 1 to 230 of 230 from Escherichia coli K-12 : B3086; hypothetical protein	3215442..3216134	Shigella flexneri 2a str. 2457T	1079571
NP_838601.1	CDS	ygjR	NC_004741.1	3216195	3217211	D	residues 1 to 334 of 338 are 98.80 pct identical to residues 1 to 334 of 334 from Escherichia coli K-12 : B3087; hypothetical protein	3216195..3217211	Shigella flexneri 2a str. 2457T	1079572
NP_838602.1	CDS	ygjT	NC_004741.1	3217482	3218447	D	residues 1 to 320 of 321 are 97.52 pct identical to residues 1 to 320 of 321 from Escherichia coli K-12 : B3088; transporter	3217482..3218447	Shigella flexneri 2a str. 2457T	1079573
NP_838603.1	CDS	ygjU	NC_004741.1	3219032	3220276	D	involved in the import of serine and threonine coupled with the import of sodium; serine/threonine transporter SstT	3219032..3220276	Shigella flexneri 2a str. 2457T	1079574
NP_838604.1	CDS	ygjV	NC_004741.1	3220281	3220832	R	residues 1 to 183 of 183 are 98.36 pct identical to residues 1 to 183 of 183 from Escherichia coli K-12 : B3090; hypothetical protein	complement(3220281..3220832)	Shigella flexneri 2a str. 2457T	1079575
NP_838605.1	CDS	uxaA	NC_004741.1	3220915	3222402	R	residues 1 to 495 of 495 are 96.76 pct identical to residues 1 to 495 of 495 from Escherichia coli K-12 : B3091; altronate hydrolase	complement(3220915..3222402)	Shigella flexneri 2a str. 2457T	1079576
NP_838606.1	CDS	uxaC	NC_004741.1	3222417	3223829	R	catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate; functions in glucuronic and galacturonic metabolism; glucuronate isomerase	complement(3222417..3223829)	Shigella flexneri 2a str. 2457T	1079577
NP_838607.1	CDS	exuT	NC_004741.1	3224314	3225612	D	residues 1 to 432 of 432 are 89.58 pct identical to residues 41 to 472 of 472 from Escherichia coli K-12 : B3093; transport protein of hexuronates	3224314..3225612	Shigella flexneri 2a str. 2457T	1079578
NP_838608.1	CDS	S3341	NC_004741.1	3225700	3226332	R	residues 1 to 200 of 210 are 33.81 pct identical to residues 161 to 350 of 359 from GenPept : >emb|CAD08773.1| (AL627266)  fimbrail protein [Salmonella enterica subsp. enterica serovar Typhi]; hypothetical protein	complement(3225700..3226332)	Shigella flexneri 2a str. 2457T	1079580
NP_838609.1	CDS	S3342	NC_004741.1	3226785	3228776	R	residues 1 to 645 of 663 are 31.39 pct identical to residues 237 to 878 of 895 from GenPept : >emb|CAD08772.1| (AL627266) outer membrane fimbrial user protein [Salmonella enterica subsp. enterica serovar Typhi]; hypothetical protein	complement(3226785..3228776)	Shigella flexneri 2a str. 2457T	1079581
NP_838610.1	CDS	S3343	NC_004741.1	3228942	3229217	D	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	3228942..3229217	Shigella flexneri 2a str. 2457T	1079583
NP_838611.1	CDS	S3344	NC_004741.1	3229136	3229639	D	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri]; IS1 orfB	3229136..3229639	Shigella flexneri 2a str. 2457T	1079584
NP_838612.1	CDS	exuR	NC_004741.1	3229747	3230523	D	regulates the exuT, uxaCA and uxuRAB operons which encode genes involved in hexuronate utilization.; DNA-binding transcriptional repressor ExuR	3229747..3230523	Shigella flexneri 2a str. 2457T	1079595
NP_838613.1	CDS	yqjA	NC_004741.1	3230868	3231530	D	residues 15 to 220 of 220 are 100.00 pct identical to residues 15 to 220 of 220 from Escherichia coli K-12 : B3095; hypothetical protein	3230868..3231530	Shigella flexneri 2a str. 2457T	1079585
NP_838614.1	CDS	yqjB	NC_004741.1	3231549	3231917	D	residues 1 to 122 of 122 are 85.24 pct identical to residues 6 to 127 of 127 from Escherichia coli K-12 : B3096; hypothetical protein	3231549..3231917	Shigella flexneri 2a str. 2457T	1079586
NP_838615.1	CDS	yqjD	NC_004741.1	3232456	3232761	D	residues 1 to 82 of 101 are 78.04 pct identical to residues 1 to 82 of 101 from Escherichia coli K-12 : B3098; hypothetical protein	3232456..3232761	Shigella flexneri 2a str. 2457T	1079588
NP_838616.1	CDS	yqjE	NC_004741.1	3232764	3233168	D	residues 1 to 134 of 134 are 67.16 pct identical to residues 1 to 134 of 134 from Escherichia coli K-12 : B3099; hypothetical protein	3232764..3233168	Shigella flexneri 2a str. 2457T	1079589
NP_838617.1	CDS	S3351	NC_004741.1	3233158	3233457	D	residues 1 to 99 of 99 are 95.95 pct identical to residues 1 to 99 of 99 from Escherichia coli K-12 : B3100; hypothetical protein	3233158..3233457	Shigella flexneri 2a str. 2457T	1079590
NP_838618.1	CDS	yqjG	NC_004741.1	3234009	3234995	D	residues 1 to 328 of 328 are 95.42 pct identical to residues 1 to 328 of 328 from Escherichia coli K-12 : B3102; transferase	3234009..3234995	Shigella flexneri 2a str. 2457T	1079592
NP_838619.1	CDS	yhaH	NC_004741.1	3235288	3235656	D	residues 1 to 120 of 122 are 99.16 pct identical to residues 1 to 120 of 121 from Escherichia coli K-12 : B3103; cytochrome	3235288..3235656	Shigella flexneri 2a str. 2457T	1079593
NP_838620.1	CDS	yhaJ	NC_004741.1	3235863	3236759	R	residues 1 to 298 of 298 are 99.66 pct identical to residues 1 to 298 of 298 from Escherichia coli K-12 : B3105; LYSR-type transcriptional regulator	complement(3235863..3236759)	Shigella flexneri 2a str. 2457T	1079594
NP_838621.1	CDS	yhaK	NC_004741.1	3236864	3237565	D	residues 1 to 233 of 233 are 99.14 pct identical to residues 1 to 233 of 233 from Escherichia coli K-12 : B3106; hypothetical protein	3236864..3237565	Shigella flexneri 2a str. 2457T	1079629
NP_838622.1	CDS	yhaL	NC_004741.1	3237588	3237752	D	residues 1 to 54 of 54 are 94.44 pct identical to residues 3 to 56 of 56 from Escherichia coli K-12 : B3107; hypothetical protein	3237588..3237752	Shigella flexneri 2a str. 2457T	1079596
NP_838623.1	CDS	yhaM	NC_004741.1	3237964	3238530	R	residues 1 to 188 of 188 are 92.02 pct identical to residues 1 to 188 of 188 from Escherichia coli K-12 : B3108; hypothetical protein	complement(3237964..3238530)	Shigella flexneri 2a str. 2457T	1079597
NP_838624.1	CDS	yhaN	NC_004741.1	3238466	3239275	R	residues 1 to 184 of 269 are 73.36 pct identical to residues 1 to 184 of 187 from Escherichia coli K-12 : B3109; hypothetical protein	complement(3238466..3239275)	Shigella flexneri 2a str. 2457T	1079598
NP_838625.1	CDS	yhaO	NC_004741.1	3239303	3240634	R	residues 21 to 443 of 443 are 96.69 pct identical to residues 3 to 425 of 425 from Escherichia coli K-12 : B3110; transport system permease	complement(3239303..3240634)	Shigella flexneri 2a str. 2457T	1079599
NP_838626.1	CDS	S3363	NC_004741.1	3240909	3242273	R	residues 1 to 453 of 454 are 71.74 pct identical to residues 1 to 453 of 454 from Escherichia coli K-12 : B1814; L-serine deaminase	complement(3240909..3242273)	Shigella flexneri 2a str. 2457T	1079600
NP_838627.1	CDS	yhaR	NC_004741.1	3242345	3242734	R	residues 1 to 129 of 129 are 100.00 pct identical to residues 22 to 150 of 150 from Escherichia coli K-12 : B3113; hypothetical protein	complement(3242345..3242734)	Shigella flexneri 2a str. 2457T	1079601
NP_838628.1	CDS	tdcE	NC_004741.1	3242748	3245042	R	residues 1 to 741 of 764 are 97.97 pct identical to residues 1 to 741 of 746 from Escherichia coli K-12 : B3114; formate acetyltransferase 3	complement(3242748..3245042)	Shigella flexneri 2a str. 2457T	1079602
NP_838629.2	CDS	tdcD	NC_004741.1	3245076	3246296	R	catalyzes the formation of propanoyl phosphate from propanoate and ATP; TdcD also has acetate kinase activities and functions in anaerobic threonine catabolism; propionate/acetate kinase	complement(3245076..3246296)	Shigella flexneri 2a str. 2457T	1079603
NP_838630.1	CDS	tdcC	NC_004741.1	3246310	3247641	R	involved in the import of threonine and serine in combination with the import of a proton; threonine/serine transporter TdcC	complement(3246310..3247641)	Shigella flexneri 2a str. 2457T	1079604
NP_838631.1	CDS	tdcB	NC_004741.1	3247663	3248652	R	catalyzes the formation of 2-oxobutanoate from L-threonine; catabolic; threonine dehydratase	complement(3247663..3248652)	Shigella flexneri 2a str. 2457T	1079605
NP_838632.1	CDS	tdcA	NC_004741.1	3248751	3249689	R	regulates the tdcABCDEFG operon which is involved in amino acid degradation; DNA-binding transcriptional activator TdcA	complement(3248751..3249689)	Shigella flexneri 2a str. 2457T	1079606
NP_838633.1	CDS	tdcR	NC_004741.1	3249879	3250223	D	participates in controlling the expression of several structural genes for the enzyme threonine dehydratase; TdcR activates the tdcABCDEFG operon; DNA-binding transcriptional activator TdcR	3249879..3250223	Shigella flexneri 2a str. 2457T	1079607
NP_838634.1	CDS	S3374	NC_004741.1	3252275	3252439	D	residues 1 to 54 of 54 are 96.29 pct identical to residues 1 to 54 of 54 from Escherichia coli K-12 : B3122; hypothetical protein	3252275..3252439	Shigella flexneri 2a str. 2457T	1079610
NP_838635.2	CDS	yhaD	NC_004741.1	3253237	3254382	R	residues 1 to 408 of 408 are 94.60 pct identical to residues 1 to 408 of 408 from Escherichia coli K-12 : B3124; glycerate kinase	complement(3253237..3254382)	Shigella flexneri 2a str. 2457T	1079613
NP_838636.2	CDS	garR	NC_004741.1	3254479	3255369	R	catalyzes the reduction of tartronate semialdehyde to glycerate; tartronate semialdehyde reductase	complement(3254479..3255369)	Shigella flexneri 2a str. 2457T	1079614
NP_838637.1	CDS	yhaU	NC_004741.1	3256185	3257519	R	residues 1 to 444 of 444 are 95.94 pct identical to residues 1 to 444 of 444 from Escherichia coli K-12 : B3127; transporter	complement(3256185..3257519)	Shigella flexneri 2a str. 2457T	1079616
NP_838638.1	CDS	yhaG	NC_004741.1	3257894	3259465	D	residues 1 to 523 of 523 are 94.26 pct identical to residues 1 to 523 of 523 from Escherichia coli K-12 : B3128; hydrolase	3257894..3259465	Shigella flexneri 2a str. 2457T	1079617
NP_838639.1	CDS	agaR	NC_004741.1	3259517	3260341	R	transcriptional repressor for the agaZVWA and agaSYBCDI operons; DNA-binding transcriptional regulator AgaR	complement(3259517..3260341)	Shigella flexneri 2a str. 2457T	1079618
NP_838640.1	CDS	agaZ	NC_004741.1	3260590	3261870	D	residues 1 to 426 of 426 are 99.29 pct identical to residues 1 to 426 of 426 from Escherichia coli K-12 : B3132; tagatose 6-phosphate kinase 2	3260590..3261870	Shigella flexneri 2a str. 2457T	1079619
NP_838641.1	CDS	agaV	NC_004741.1	3261857	3262366	D	catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; involved in N-acetylgalactosamine transport; N-acetylgalactosamine-specific PTS system transporter subunit IIB	3261857..3262366	Shigella flexneri 2a str. 2457T	1079620
NP_838642.1	CDS	agaW	NC_004741.1	3262377	3263156	D	residues 1 to 125 of 259 are 65.60 pct identical to residues 1 to 125 of 133 from Escherichia coli K-12 : B3134; PTS transport; N-acetylgalactosameine-specific IIC component 2	3262377..3263156	Shigella flexneri 2a str. 2457T	1079621
NP_838643.1	CDS	agaE	NC_004741.1	3263146	3263955	D	residues 1 to 269 of 269 are 99.25 pct identical to residues 1 to 269 of 292 from GenPept : >gb|AAG58265.1|AE005542_7 (AE005542)  phosphotransferase system enzyme subunit [Escherichia coli O157:H7 EDL933]; PTS transport; transport enzyme subunit	3263146..3263955	Shigella flexneri 2a str. 2457T	1079622
NP_838644.1	CDS	agaF	NC_004741.1	3264042	3264476	D	residues 1 to 144 of 144 are 98.61 pct identical to residues 1 to 144 of 144 from GenPept : >gb|AAG58266.1|AE005542_8 (AE005542)  phosphotransferase system enzyme subunit [Escherichia coli O157:H7 EDL933]; PTS transport; transport enzyme subunit	3264042..3264476	Shigella flexneri 2a str. 2457T	1079623
NP_838645.1	CDS	agaA	NC_004741.1	3264473	3264916	D	residues 1 to 139 of 147 are 96.40 pct identical to residues 8 to 146 of 384 from GenPept : >gb|AAF81087.1|AF228498_7 (AF228498) AgaA [Escherichia coli]; N-acetylglucosamine-6-phosphate deacetylase	3264473..3264916	Shigella flexneri 2a str. 2457T	1079624
NP_838646.1	CDS	S3388	NC_004741.1	3264945	3265220	D	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	3264945..3265220	Shigella flexneri 2a str. 2457T	1079625
NP_838647.1	CDS	S3389	NC_004741.1	3265139	3265642	D	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri]; IS1 orfB	3265139..3265642	Shigella flexneri 2a str. 2457T	1079626
NP_838648.1	CDS	agaC	NC_004741.1	3265897	3266700	D	catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; involved in N-acetylgalactosamine transport; N-acetylgalactosamine-specific PTS system transporter subunit IIC	3265897..3266700	Shigella flexneri 2a str. 2457T	1079627
NP_838649.1	CDS	agaD	NC_004741.1	3266690	3267481	D	catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; involved in N-acetylgalactosamine transport; N-acetylgalactosamine-specific PTS system transporter subunit IID	3266690..3267481	Shigella flexneri 2a str. 2457T	1079630
NP_838650.1	CDS	agaI	NC_004741.1	3267482	3268237	D	residues 1 to 251 of 251 are 93.62 pct identical to residues 1 to 251 of 251 from Escherichia coli K-12 : B3141; galactosamine-6-phosphate isomerase	3267482..3268237	Shigella flexneri 2a str. 2457T	1079631
NP_838651.1	CDS	S3394	NC_004741.1	3268746	3269249	R	residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri]; IS1 ORF2	complement(3268746..3269249)	Shigella flexneri 2a str. 2457T	1079632
NP_838652.1	CDS	S3395	NC_004741.1	3269168	3269443	R	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(3269168..3269443)	Shigella flexneri 2a str. 2457T	1079633
NP_838653.1	CDS	yraI	NC_004741.1	3270079	3270774	D	residues 1 to 231 of 231 are 99.13 pct identical to residues 1 to 231 of 231 from Escherichia coli K-12 : B3143; chaperone	3270079..3270774	Shigella flexneri 2a str. 2457T	1079634
NP_838654.1	CDS	S3399	NC_004741.1	3272539	3272961	R	residues 1 to 140 of 140 are 98.57 pct identical to residues 162 to 301 of 301 from GenPept : >gb|AAD10297.1| (U82084) unknown [bacteriophage SfX]; partial; IS2 orfB	complement(3272539..3272961)	Shigella flexneri 2a str. 2457T	1079636
NP_838655.2	CDS	S3401	NC_004741.1	3273400	3273765	R	IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats; insertion sequence 2 OrfA protein	complement(3273400..3273765)	Shigella flexneri 2a str. 2457T	1078008
NP_838656.1	CDS	yraK	NC_004741.1	3274664	3275755	D	residues 1 to 363 of 363 are 95.31 pct identical to residues 1 to 363 of 363 from Escherichia coli K-12 : B3145; fimbrial protein	3274664..3275755	Shigella flexneri 2a str. 2457T	1079637
NP_838657.1	CDS	yraL	NC_004741.1	3275798	3276658	R	residues 1 to 286 of 286 are 91.95 pct identical to residues 1 to 286 of 286 from Escherichia coli K-12 : B3146; hypothetical protein	complement(3275798..3276658)	Shigella flexneri 2a str. 2457T	1079639
NP_838658.1	CDS	yraM	NC_004741.1	3276723	3278759	D	residues 1 to 678 of 678 are 88.93 pct identical to residues 1 to 678 of 678 from Escherichia coli K-12 : B3147; glycosylase	3276723..3278759	Shigella flexneri 2a str. 2457T	1079641
NP_838659.1	CDS	yraN	NC_004741.1	3278717	3279112	D	residues 1 to 131 of 131 are 98.47 pct identical to residues 1 to 131 of 131 from Escherichia coli K-12 : B3148; hypothetical protein	3278717..3279112	Shigella flexneri 2a str. 2457T	1079643
NP_838660.1	CDS	yraO	NC_004741.1	3279132	3279722	D	Required for the timely initiation of chromosomal replication via direct interactions with the dnaA initiator protein; DnaA initiator-associating protein DiaA	3279132..3279722	Shigella flexneri 2a str. 2457T	1077991
NP_838661.1	CDS	yraP	NC_004741.1	3279732	3280307	D	residues 1 to 191 of 191 are 90.57 pct identical to residues 1 to 191 of 191 from Escherichia coli K-12 : B3150; hypothetical protein	3279732..3280307	Shigella flexneri 2a str. 2457T	1079645
NP_838662.1	CDS	yraQ	NC_004741.1	3280421	3281461	R	residues 1 to 346 of 346 are 93.64 pct identical to residues 1 to 346 of 346 from Escherichia coli K-12 : B3151; hypothetical protein	complement(3280421..3281461)	Shigella flexneri 2a str. 2457T	1079646
NP_838663.1	CDS	yraR	NC_004741.1	3281534	3282214	R	residues 1 to 226 of 226 are 98.67 pct identical to residues 1 to 226 of 226 from Escherichia coli K-12 : B3152; hypothetical protein	complement(3281534..3282214)	Shigella flexneri 2a str. 2457T	1079647
NP_838664.1	CDS	yhbO	NC_004741.1	3282255	3282815	D	residues 1 to 186 of 186 are 98.92 pct identical to residues 1 to 186 of 186 from Escherichia coli K-12 : B3153; hypothetical protein	3282255..3282815	Shigella flexneri 2a str. 2457T	1079649
NP_838665.1	CDS	yhbP	NC_004741.1	3282795	3283238	R	residues 1 to 147 of 147 are 100.00 pct identical to residues 1 to 147 of 147 from Escherichia coli K-12 : B3154; hypothetical protein	complement(3282795..3283238)	Shigella flexneri 2a str. 2457T	1079650
NP_838666.1	CDS	yhbQ	NC_004741.1	3283289	3283591	D	residues 1 to 100 of 100 are 99.00 pct identical to residues 1 to 100 of 100 from Escherichia coli K-12 : B3155; GIY-YIG nuclease superfamily protein	3283289..3283591	Shigella flexneri 2a str. 2457T	1078053
NP_838667.1	CDS	yhbS	NC_004741.1	3283578	3284081	R	residues 1 to 167 of 167 are 99.40 pct identical to residues 1 to 167 of 167 from Escherichia coli K-12 : B3156; hypothetical protein	complement(3283578..3284081)	Shigella flexneri 2a str. 2457T	1079652
NP_838668.1	CDS	yhbT	NC_004741.1	3284075	3284599	R	residues 1 to 174 of 174 are 98.85 pct identical to residues 1 to 174 of 174 from Escherichia coli K-12 : B3157; hypothetical protein	complement(3284075..3284599)	Shigella flexneri 2a str. 2457T	1079653
NP_838669.1	CDS	yhbU	NC_004741.1	3284808	3285803	D	residues 1 to 331 of 331 are 94.25 pct identical to residues 1 to 331 of 331 from Escherichia coli K-12 : B3158; collagenase	3284808..3285803	Shigella flexneri 2a str. 2457T	1078610
NP_838670.1	CDS	yhbV	NC_004741.1	3285812	3286690	D	residues 1 to 292 of 292 are 98.63 pct identical to residues 7 to 298 of 298 from Escherichia coli K-12 : B3159; hypothetical protein	3285812..3286690	Shigella flexneri 2a str. 2457T	1079654
NP_838671.1	CDS	yhbW	NC_004741.1	3286771	3287778	D	residues 1 to 335 of 335 are 99.40 pct identical to residues 1 to 335 of 335 from Escherichia coli K-12 : B3160; hypothetical protein	3286771..3287778	Shigella flexneri 2a str. 2457T	1079902
NP_838672.1	CDS	mtr	NC_004741.1	3287896	3289140	R	tryptophan transporter of high affinity; tryptophan permease	complement(3287896..3289140)	Shigella flexneri 2a str. 2457T	1079656
NP_838673.2	CDS	deaD	NC_004741.1	3289294	3291183	R	participates in the assembly of the large subunit of the ribosome; plays a key role in optimal cell growth at low temperature and is required for normal cell division; ATP-dependent RNA helicase DeaD	complement(3289294..3291183)	Shigella flexneri 2a str. 2457T	1078673
NP_838674.1	CDS	yhbM	NC_004741.1	3291363	3292247	R	lipoprotein that appears to be involved in cell division; interacts with the periplasmic protease Prc and may be activated by protease processing; lipoprotein NlpI	complement(3291363..3292247)	Shigella flexneri 2a str. 2457T	1079657
NP_838675.1	CDS	pnp	NC_004741.1	3292356	3294560	R	residues 1 to 713 of 734 are 93.54 pct identical to residues 1 to 713 of 734 from Escherichia coli K-12 : B3164; cytidylate kinase activity; polynucleotide phosphorylase/polyadenylase	complement(3292356..3294560)	Shigella flexneri 2a str. 2457T	1079659
NP_838676.1	CDS	rpsO	NC_004741.1	3294738	3295007	R	primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15	complement(3294738..3295007)	Shigella flexneri 2a str. 2457T	1079660
NP_838677.1	CDS	truB	NC_004741.1	3295156	3296100	R	catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B	complement(3295156..3296100)	Shigella flexneri 2a str. 2457T	1079661
NP_838678.1	CDS	rbfA	NC_004741.1	3296100	3296501	R	associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A	complement(3296100..3296501)	Shigella flexneri 2a str. 2457T	1079662
NP_838679.1	CDS	infB	NC_004741.1	3296665	3299313	R	Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2	complement(3296665..3299313)	Shigella flexneri 2a str. 2457T	1079663
NP_838680.1	CDS	nusA	NC_004741.1	3299338	3300825	R	modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA	complement(3299338..3300825)	Shigella flexneri 2a str. 2457T	1078149
NP_838681.2	CDS	yhbC	NC_004741.1	3300853	3301305	R	in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein	complement(3300853..3301305)	Shigella flexneri 2a str. 2457T	1079664
NP_838682.1	CDS	argG	NC_004741.1	3301936	3303279	D	catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis; argininosuccinate synthase	3301936..3303279	Shigella flexneri 2a str. 2457T	1079667
NP_838683.1	CDS	yhbX	NC_004741.1	3303287	3303769	R	residues 1 to 160 of 160 are 99.37 pct identical to residues 388 to 547 of 547 from Escherichia coli K-12 : B3173; alkaline phosphatase I	complement(3303287..3303769)	Shigella flexneri 2a str. 2457T	1078079
NP_838684.1	CDS	secG	NC_004741.1	3305473	3305805	R	residues 1 to 110 of 110 are 99.09 pct identical to residues 1 to 110 of 110 from Escherichia coli K-12 : B3175; preprotein translocase subunit SecG	complement(3305473..3305805)	Shigella flexneri 2a str. 2457T	1077635
NP_838685.1	CDS	glmM	NC_004741.1	3306033	3307370	R	catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase	complement(3306033..3307370)	Shigella flexneri 2a str. 2457T	1079670
NP_838686.2	CDS	folP	NC_004741.1	3307363	3308211	R	catalyzes the formation of dihydropteroate from 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine diphosphate and 4-aminobenzoate; dihydropteroate synthase	complement(3307363..3308211)	Shigella flexneri 2a str. 2457T	1079671
NP_838687.1	CDS	hflB	NC_004741.1	3308301	3310235	R	inner membrane metalloprotease; may be involved in degradation of aberrant cytoplasmic and membrane proteins; ATP-dependent metalloprotease	complement(3308301..3310235)	Shigella flexneri 2a str. 2457T	1079672
NP_838688.1	CDS	rrmJ	NC_004741.1	3310335	3310964	R	Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit; 23S rRNA methyltransferase J	complement(3310335..3310964)	Shigella flexneri 2a str. 2457T	1079673
NP_838689.1	CDS	yhbY	NC_004741.1	3311090	3311383	D	RNA binding protein found associated to pre-50S subunit of the ribosome; role in ribosome assembly; necessary for optimal growth but not cell viability; RNA-binding protein YhbY	3311090..3311383	Shigella flexneri 2a str. 2457T	1079674
NP_838690.1	CDS	greA	NC_004741.1	3311539	3312015	R	necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA	complement(3311539..3312015)	Shigella flexneri 2a str. 2457T	1079675
NP_838691.1	CDS	dacB	NC_004741.1	3312263	3313696	D	penicillin binding protein 4; penicillin sensitive; catalyzes the formation of D-alanine from D-alanyl-D-alanine; one of four, DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains; D-alanyl-D-alanine carboxypeptidase	3312263..3313696	Shigella flexneri 2a str. 2457T	1079676
NP_838692.1	CDS	obgE	NC_004741.1	3313882	3315054	R	essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE	complement(3313882..3315054)	Shigella flexneri 2a str. 2457T	1079677
NP_838693.1	CDS	yhbE	NC_004741.1	3315070	3316035	R	residues 1 to 321 of 321 are 95.01 pct identical to residues 1 to 321 of 321 from Escherichia coli K-12 : B3184; hypothetical protein	complement(3315070..3316035)	Shigella flexneri 2a str. 2457T	1079678
NP_838694.1	CDS	rpmA	NC_004741.1	3316162	3316419	R	involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27	complement(3316162..3316419)	Shigella flexneri 2a str. 2457T	1079396
NP_838695.1	CDS	rplU	NC_004741.1	3316440	3316751	R	residues 1 to 103 of 103 are 100.00 pct identical to residues 1 to 103 of 103 from Escherichia coli K-12 : B3186; 50S ribosomal protein L21	complement(3316440..3316751)	Shigella flexneri 2a str. 2457T	1079679
NP_838696.1	CDS	ispB	NC_004741.1	3317009	3317980	D	residues 1 to 323 of 323 are 96.59 pct identical to residues 1 to 323 of 323 from Escherichia coli K-12 : B3187; octaprenyl diphosphate synthase	3317009..3317980	Shigella flexneri 2a str. 2457T	1079548
NP_838697.1	CDS	nlp	NC_004741.1	3318207	3318485	D	activator of maltose metabolism genes; DNA-binding transcriptional regulator Nlp	3318207..3318485	Shigella flexneri 2a str. 2457T	1079682
NP_838698.1	CDS	murA	NC_004741.1	3318533	3319792	R	adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase	complement(3318533..3319792)	Shigella flexneri 2a str. 2457T	1079742
NP_838699.1	CDS	yrbA	NC_004741.1	3319847	3320116	R	residues 1 to 89 of 89 are 100.00 pct identical to residues 1 to 89 of 89 from Escherichia coli K-12 : B3190; hypothetical protein	complement(3319847..3320116)	Shigella flexneri 2a str. 2457T	1079683
NP_838700.1	CDS	yrbB	NC_004741.1	3320261	3320650	R	residues 1 to 129 of 129 are 92.24 pct identical to residues 1 to 129 of 129 from Escherichia coli K-12 : B3191; hypothetical protein	complement(3320261..3320650)	Shigella flexneri 2a str. 2457T	1079685
NP_838701.1	CDS	yrbC	NC_004741.1	3320554	3321189	R	residues 1 to 211 of 211 are 100.00 pct identical to residues 1 to 211 of 211 from Escherichia coli K-12 : B3192; hypothetical protein	complement(3320554..3321189)	Shigella flexneri 2a str. 2457T	1079404
NP_838702.1	CDS	vpsC	NC_004741.1	3321208	3321759	R	residues 1 to 183 of 183 are 90.71 pct identical to residues 1 to 183 of 183 from Escherichia coli K-12 : B3193; cytoplasmic membrane protein	complement(3321208..3321759)	Shigella flexneri 2a str. 2457T	1079686
NP_838703.1	CDS	vpsB	NC_004741.1	3321764	3322546	R	residues 1 to 260 of 260 are 100.00 pct identical to residues 1 to 260 of 260 from Escherichia coli K-12 : B3194; integral membrane protein	complement(3321764..3322546)	Shigella flexneri 2a str. 2457T	1076490
NP_838704.1	CDS	vpsA	NC_004741.1	3322554	3323363	R	ATP-binding subunit of a  ABC toluene efflux transporter; ABC transporter ATP-binding protein	complement(3322554..3323363)	Shigella flexneri 2a str. 2457T	1079688
NP_838705.1	CDS	yrbG	NC_004741.1	3323573	3324538	D	YrbG; inner membrane protein involved in cell envelope integrity; sodium ion/calcium ion exchanger; in E. coli it is non essential for cell viability; member of the YRBG family of cation/Ca2+ exchangers; calcium/sodium:proton antiporter	3323573..3324538	Shigella flexneri 2a str. 2457T	1078234
NP_838706.1	CDS	yrbH	NC_004741.1	3324552	3325538	D	residues 1 to 328 of 328 are 96.34 pct identical to residues 1 to 328 of 328 from Escherichia coli K-12 : B3197; D-arabinose 5-phosphate isomerase	3324552..3325538	Shigella flexneri 2a str. 2457T	1079689
NP_838707.1	CDS	yrbI	NC_004741.1	3325559	3326125	D	forms homotetramers; catalyzes hydrolysis of KDO 8-P to KDO and inorganic phosphate; functions in lipopolysaccharide biosynthesis; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase	3325559..3326125	Shigella flexneri 2a str. 2457T	1079690
NP_838708.1	CDS	yrbK	NC_004741.1	3326122	3326697	D	residues 1 to 191 of 191 are 100.00 pct identical to residues 1 to 191 of 191 from Escherichia coli K-12 : B3199; hypothetical protein	3326122..3326697	Shigella flexneri 2a str. 2457T	1079691
NP_838709.1	CDS	yhbN	NC_004741.1	3326666	3327223	D	LptA; periplasmic binding protein part of a  ABC superfamily of uptake transporters; interacts with LptB protein, the ATP binding component of the uptake system; lipopolysaccharide transport periplasmic protein LptA	3326666..3327223	Shigella flexneri 2a str. 2457T	1079692
NP_838710.1	CDS	yhbG	NC_004741.1	3327230	3327955	D	residues 1 to 241 of 241 are 96.68 pct identical to residues 1 to 241 of 241 from Escherichia coli K-12 : B3201; ABC transporter ATP-binding protein	3327230..3327955	Shigella flexneri 2a str. 2457T	1079693
NP_838711.1	CDS	rpoN	NC_004741.1	3328003	3329436	D	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54	3328003..3329436	Shigella flexneri 2a str. 2457T	1080356
NP_838712.1	CDS	yhbH	NC_004741.1	3329459	3329746	D	YhbH; resting ribosome-binding protein involved in ribosome stabilization and preservation in stationary phase; binds specifically 100S ribosomes (an inactive ribosome product of a 70S ribosome dimerization); seems to be involved in modulation of the sigma(54) (RpoN) activity for quorum sensing; sigma(54) modulation protein	3329459..3329746	Shigella flexneri 2a str. 2457T	1077882
NP_838713.1	CDS	ptsN	NC_004741.1	3329864	3330355	D	residues 1 to 163 of 163 are 100.00 pct identical to residues 1 to 163 of 163 from Escherichia coli K-12 : B3204; regulates N metabolism; PTS IIA-like nitrogen-regulatory protein PtsN	3329864..3330355	Shigella flexneri 2a str. 2457T	1079694
NP_838714.1	CDS	yhbJ	NC_004741.1	3330401	3331255	D	residues 1 to 284 of 284 are 95.77 pct identical to residues 1 to 284 of 284 from Escherichia coli K-12 : B3205; hypothetical protein	3330401..3331255	Shigella flexneri 2a str. 2457T	1079364
NP_838715.1	CDS	ptsO	NC_004741.1	3331252	3331524	D	residues 1 to 90 of 90 are 100.00 pct identical to residues 1 to 90 of 90 from Escherichia coli K-12 : B3206; HPr-like, nitrogen related, exchangesphosphate with Enzymei, Hpr; phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr)	3331252..3331524	Shigella flexneri 2a str. 2457T	1079695
NP_838716.1	CDS	yrbL	NC_004741.1	3331737	3332369	D	residues 1 to 210 of 210 are 93.33 pct identical to residues 1 to 210 of 210 from Escherichia coli K-12 : B3207; hypothetical protein	3331737..3332369	Shigella flexneri 2a str. 2457T	1079697
NP_838717.1	CDS	yhbL	NC_004741.1	3333090	3333743	R	residues 1 to 217 of 217 are 94.47 pct identical to residues 4 to 220 of 220 from Escherichia coli K-12 : B3209; isoprenoid biosynthesis protein with amidotransferase-like domain	complement(3333090..3333743)	Shigella flexneri 2a str. 2457T	1079698
NP_838718.1	CDS	arcB	NC_004741.1	3333973	3336309	R	sensor-regulator protein which regulates the expression of many genes in response to respiratory growth conditions including anaerobic repression of the arc modulon; hybrid sensory histidine kinase in two-component regulatory system with ArcA; aerobic respiration control sensor protein ArcB	complement(3333973..3336309)	Shigella flexneri 2a str. 2457T	1078081
NP_838719.1	CDS	yhcC	NC_004741.1	3336405	3337334	R	residues 1 to 309 of 309 are 99.67 pct identical to residues 1 to 309 of 309 from Escherichia coli K-12 : B3211; hypothetical protein	complement(3336405..3337334)	Shigella flexneri 2a str. 2457T	1079699
NP_838720.2	CDS	gltB	NC_004741.1	3337916	3342469	D	catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate; glutamate synthase	3337916..3342469	Shigella flexneri 2a str. 2457T	1078530
NP_838721.1	CDS	gltD	NC_004741.1	3342482	3343900	D	glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase	3342482..3343900	Shigella flexneri 2a str. 2457T	1079700
NP_838722.1	CDS	S3473	NC_004741.1	3345046	3346116	D	residues 1 to 257 of 356 are 86.04 pct identical to residues 36 to 293 of 307 from GenPept : >gb|AAF28144.1|AF153317_45 (AF153317) InsB [Shigella dysenteriae]; IS600 orf	3345046..3346116	Shigella flexneri 2a str. 2457T	1079702
NP_838723.1	CDS	yhcH	NC_004741.1	3346192	3346656	R	residues 1 to 154 of 154 are 90.25 pct identical to residues 1 to 154 of 154 from Escherichia coli K-12 : B3221; hypothetical protein	complement(3346192..3346656)	Shigella flexneri 2a str. 2457T	1079704
NP_838724.2	CDS	yhcI	NC_004741.1	3346653	3347528	R	catalyzes the phosphorylation of the N-acetylmannosamine (ManNAc) liberated from N-acetyl-neuraminic acid by the nanA protein; N-acetylmannosamine kinase	complement(3346653..3347528)	Shigella flexneri 2a str. 2457T	1079665
NP_838725.1	CDS	yhcJ	NC_004741.1	3347525	3348214	R	Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate; N-acetylmannosamine-6-phosphate 2-epimerase	complement(3347525..3348214)	Shigella flexneri 2a str. 2457T	1079706
NP_838726.2	CDS	nanT	NC_004741.1	3348262	3349752	R	residues 1 to 506 of 506 are 89.72 pct identical to residues 1 to 506 of 506 from Escherichia coli K-12 : B3224; sialic acid transporter	complement(3348262..3349752)	Shigella flexneri 2a str. 2457T	1076756
NP_838727.1	CDS	nanA	NC_004741.1	3349862	3350755	R	catalyzes the formation of pyruvate and N-acetylmannosamine from N-acetylneuraminic acid; N-acetylneuraminate lyase	complement(3349862..3350755)	Shigella flexneri 2a str. 2457T	1079707
NP_838728.1	CDS	yhcK	NC_004741.1	3350877	3351659	R	Transcriptional repressor of the nan operon that encodes proteins involved in sialic acid utilization; transcriptional regulator NanR	complement(3350877..3351659)	Shigella flexneri 2a str. 2457T	1079708
NP_838729.1	CDS	S3480	NC_004741.1	3352106	3352381	D	residues 1 to 91 of 91 are 98.90 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	3352106..3352381	Shigella flexneri 2a str. 2457T	1079709
NP_838730.1	CDS	S3481	NC_004741.1	3352300	3352803	D	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri]; IS1 orfB	3352300..3352803	Shigella flexneri 2a str. 2457T	1078992
NP_838731.1	CDS	yhcL	NC_004741.1	3352824	3354191	D	YhcL; uncharacterized member of the DcuC family of anaerobic dicarboxylate transporters; probable role in transport of carboxylates across the inner membrane from the periplasm; its encoding gene is not essential for growth and is probably cryptic; cryptic C4-dicarboxylate transporter DcuD	3352824..3354191	Shigella flexneri 2a str. 2457T	1079710
NP_838732.1	CDS	sspB	NC_004741.1	3354234	3354731	R	residues 1 to 133 of 165 are 100.00 pct identical to residues 1 to 133 of 165 from Escherichia coli K-12 : B3228; ClpXP protease specificity-enhancing factor	complement(3354234..3354731)	Shigella flexneri 2a str. 2457T	1079711
NP_838733.1	CDS	sspA	NC_004741.1	3354737	3355375	R	transcriptional activator; required for activation of bacteriophage P1 late promoter; induced by starvation; stringent starvation protein A	complement(3354737..3355375)	Shigella flexneri 2a str. 2457T	1079712
NP_838734.1	CDS	rpsI	NC_004741.1	3355770	3356162	R	forms a direct contact with the tRNA during translation; 30S ribosomal protein S9	complement(3355770..3356162)	Shigella flexneri 2a str. 2457T	1079713
NP_838735.1	CDS	rplM	NC_004741.1	3356178	3356606	R	in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13	complement(3356178..3356606)	Shigella flexneri 2a str. 2457T	1079714
NP_838736.1	CDS	yhcM	NC_004741.1	3356825	3357952	R	residues 1 to 375 of 375 are 98.66 pct identical to residues 1 to 375 of 375 from Escherichia coli K-12 : B3232; hypothetical protein	complement(3356825..3357952)	Shigella flexneri 2a str. 2457T	1079715
NP_838737.1	CDS	yhcB	NC_004741.1	3358146	3358544	D	residues 1 to 132 of 132 are 78.03 pct identical to residues 3 to 134 of 134 from Escherichia coli K-12 : B3233; cytochrome d ubiquinol oxidase subunit III	3358146..3358544	Shigella flexneri 2a str. 2457T	1079716
NP_838738.1	CDS	degS	NC_004741.1	3360135	3361202	D	residues 1 to 355 of 355 are 89.85 pct identical to residues 1 to 355 of 355 from Escherichia coli K-12 : B3235; serine endoprotease	3360135..3361202	Shigella flexneri 2a str. 2457T	1079718
NP_838739.1	CDS	mdh	NC_004741.1	3361264	3362202	R	oxidizes malate to oxaloacetate; malate dehydrogenase	complement(3361264..3362202)	Shigella flexneri 2a str. 2457T	1079719
NP_838740.1	CDS	argR	NC_004741.1	3362637	3363107	D	regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes; arginine repressor	3362637..3363107	Shigella flexneri 2a str. 2457T	1079720
NP_838741.1	CDS	yhcN	NC_004741.1	3363421	3363735	D	residues 1 to 104 of 104 are 83.65 pct identical to residues 1 to 104 of 104 from Escherichia coli K-12 : B3238; hypothetical protein	3363421..3363735	Shigella flexneri 2a str. 2457T	1079721
NP_838742.1	CDS	yhcO	NC_004741.1	3363791	3364063	R	residues 1 to 90 of 90 are 98.88 pct identical to residues 1 to 90 of 90 from Escherichia coli K-12 : B3239; hypothetical protein	complement(3363791..3364063)	Shigella flexneri 2a str. 2457T	1079722
NP_838743.1	CDS	yhcP	NC_004741.1	3364155	3366122	R	with AaeA forms an efflux pump whose substrates are p-hydroxybenzoic acid 6-hydroxy-2-naphthoic and 2-hydroxycinnamate; p-hydroxybenzoic acid efflux subunit AaeB	complement(3364155..3366122)	Shigella flexneri 2a str. 2457T	1077875
NP_838744.1	CDS	yhcQ	NC_004741.1	3366128	3367060	R	with AaeB forms an efflux pump whose substrates are p-hydroxybenzoic acid, 6-hydroxy-2-naphthoic and 2-hydroxycinnamate; p-hydroxybenzoic acid efflux subunit AaeA	complement(3366128..3367060)	Shigella flexneri 2a str. 2457T	1079723
NP_838745.2	CDS	yhcR	NC_004741.1	3367068	3367271	R	membrane protein AaeX; the gene is a member of the aaeXAB operon; hypothetical protein	complement(3367068..3367271)	Shigella flexneri 2a str. 2457T	1079724
NP_838746.1	CDS	yhcS	NC_004741.1	3367472	3368383	D	residues 1 to 303 of 303 are 99.66 pct identical to residues 7 to 309 of 309 from Escherichia coli K-12 : B3243; DNA-binding transcriptional regulator	3367472..3368383	Shigella flexneri 2a str. 2457T	1079725
NP_838747.1	CDS	tldD	NC_004741.1	3368511	3369956	R	responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17, an exported protein that targets the essential topoisomerase II DNA gyrase; degrades the E. coli plasmid F-encoded CcdA; protease TldD	complement(3368511..3369956)	Shigella flexneri 2a str. 2457T	1079726
NP_838748.1	CDS	yhdP	NC_004741.1	3370112	3373072	R	residues 1 to 986 of 986 are 99.49 pct identical to residues 1 to 986 of 986 from Escherichia coli K-12 : B3245; hypothetical protein	complement(3370112..3373072)	Shigella flexneri 2a str. 2457T	1079727
NP_838749.1	CDS	cafA	NC_004741.1	3373980	3375449	R	involved in the processing of the 5'end of 16S rRNA; ribonuclease G	complement(3373980..3375449)	Shigella flexneri 2a str. 2457T	1079730
NP_838750.1	CDS	maf	NC_004741.1	3375439	3376032	R	Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein	complement(3375439..3376032)	Shigella flexneri 2a str. 2457T	1079731
NP_838751.1	CDS	mreD	NC_004741.1	3376041	3376529	R	part of cell wall structural complex MreBCD; transmembrane component; rod shape-determining protein MreD	complement(3376041..3376529)	Shigella flexneri 2a str. 2457T	1079732
NP_838752.1	CDS	mreC	NC_004741.1	3376736	3377632	R	in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC	complement(3376736..3377632)	Shigella flexneri 2a str. 2457T	1078482
NP_838753.2	CDS	mreB	NC_004741.1	3377698	3378741	R	functions in MreBCD complex in some organisms; rod shape-determining protein MreB	complement(3377698..3378741)	Shigella flexneri 2a str. 2457T	1079734
NP_838754.1	CDS	yhdA	NC_004741.1	3379046	3380986	R	regulates the degradation of the small RNAs CsrB and CsrC; may function to targate RNase E to specific RNA molecules; regulatory protein CsrD	complement(3379046..3380986)	Shigella flexneri 2a str. 2457T	1079735
NP_838755.1	CDS	yhdH	NC_004741.1	3381138	3382112	D	residues 1 to 324 of 324 are 90.74 pct identical to residues 1 to 324 of 324 from Escherichia coli K-12 : B3253; dehydrogenase	3381138..3382112	Shigella flexneri 2a str. 2457T	1079736
NP_838756.1	CDS	S3509	NC_004741.1	3382170	3382271	R	residues 1 to 33 of 33 are 100.00 pct identical to residues 1 to 33 of 33 from Escherichia coli K-12 : B3254; hypothetical protein	complement(3382170..3382271)	Shigella flexneri 2a str. 2457T	1079738
NP_838757.1	CDS	accB	NC_004741.1	3383090	3383560	D	composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit	3383090..3383560	Shigella flexneri 2a str. 2457T	1080905
NP_838758.1	CDS	accC	NC_004741.1	3383571	3384920	D	an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit	3383571..3384920	Shigella flexneri 2a str. 2457T	1080972
NP_838759.1	CDS	yhdT	NC_004741.1	3385029	3385271	D	residues 1 to 80 of 80 are 97.50 pct identical to residues 1 to 80 of 80 from Escherichia coli K-12 : B3257; hypothetical protein	3385029..3385271	Shigella flexneri 2a str. 2457T	1079741
NP_838760.1	CDS	panF	NC_004741.1	3385261	3386712	D	mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions; member of SSS family of sodium/solute symporters; the imported panthothenate is phosphorylated by panthothenate kinase; sodium/panthothenate symporter	3385261..3386712	Shigella flexneri 2a str. 2457T	1078464
NP_838761.1	CDS	prmA	NC_004741.1	3386724	3387605	D	methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; 50S ribosomal protein L11 methyltransferase	3386724..3387605	Shigella flexneri 2a str. 2457T	1079743
NP_838762.1	CDS	yhdG	NC_004741.1	3388057	3388899	D	residues 1 to 280 of 280 are 99.64 pct identical to residues 42 to 321 of 321 from Escherichia coli K-12 : B3260; dehydrogenase	3388057..3388899	Shigella flexneri 2a str. 2457T	1079744
NP_838763.1	CDS	fis	NC_004741.1	3388925	3389221	D	Stimulates excision of phage lambda; affects Mu development; acts as an activator of rRNA and iRNA transcription; DNA-binding protein Fis	3388925..3389221	Shigella flexneri 2a str. 2457T	1079745
NP_838764.1	CDS	yhdJ	NC_004741.1	3389307	3390191	D	residues 1 to 294 of 294 are 97.95 pct identical to residues 3 to 296 of 296 from Escherichia coli K-12 : B3262; methyltransferase	3389307..3390191	Shigella flexneri 2a str. 2457T	1079687
NP_838765.1	CDS	S3519	NC_004741.1	3390469	3390972	R	residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri]; IS1 orfB	complement(3390469..3390972)	Shigella flexneri 2a str. 2457T	1079747
NP_838766.1	CDS	S3520	NC_004741.1	3390891	3391166	R	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(3390891..3391166)	Shigella flexneri 2a str. 2457T	1079748
NP_838767.1	CDS	yhdW	NC_004741.1	3391510	3392427	D	residues 1 to 305 of 305 are 99.01 pct identical to residues 1 to 305 of 305 from Escherichia coli K-12 : B3268; periplasmic binding transport protein	3391510..3392427	Shigella flexneri 2a str. 2457T	1079739
NP_838768.1	CDS	S3523	NC_004741.1	3393056	3393559	R	residues 1 to 97 of 97 are 82.47 pct identical to residues 71 to 167 of 167 from GenPept : >gb|AAL72450.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS1 orfB	complement(3393056..3393559)	Shigella flexneri 2a str. 2457T	1077904
NP_838769.1	CDS	S3524	NC_004741.1	3393478	3393753	R	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(3393478..3393753)	Shigella flexneri 2a str. 2457T	1079751
NP_838770.1	CDS	yhdY	NC_004741.1	3394451	3395554	D	residues 1 to 367 of 367 are 98.91 pct identical to residues 2 to 368 of 368 from Escherichia coli K-12 : B3270; transport system permease	3394451..3395554	Shigella flexneri 2a str. 2457T	1079752
NP_838771.1	CDS	yhdZ	NC_004741.1	3395562	3396320	D	residues 1 to 252 of 252 are 98.41 pct identical to residues 1 to 252 of 252 from Escherichia coli K-12 : B3271; ATP-binding component of a transport system	3395562..3396320	Shigella flexneri 2a str. 2457T	1076480
NP_838772.1	CDS	yrdA	NC_004741.1	3401985	3402755	D	residues 1 to 256 of 256 are 100.00 pct identical to residues 1 to 256 of 256 from Escherichia coli K-12 : B3279; transferase	3401985..3402755	Shigella flexneri 2a str. 2457T	1079758
NP_838773.1	CDS	yrdB	NC_004741.1	3402731	3402988	R	residues 1 to 85 of 85 are 100.00 pct identical to residues 1 to 85 of 85 from Escherichia coli K-12 : B3280; hypothetical protein	complement(3402731..3402988)	Shigella flexneri 2a str. 2457T	1079760
NP_838774.1	CDS	aroE	NC_004741.1	3402985	3403803	R	AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase	complement(3402985..3403803)	Shigella flexneri 2a str. 2457T	1079761
NP_838775.1	CDS	yrdC	NC_004741.1	3403808	3404380	R	RimN; YrdC; required for maturation of 16s RNA; binds preferentially double stranded RNA; ribosome maturation factor	complement(3403808..3404380)	Shigella flexneri 2a str. 2457T	1079762
NP_838776.1	CDS	yrdD	NC_004741.1	3404385	3404903	R	residues 1 to 162 of 162 are 95.06 pct identical to residues 8 to 169 of 169 from Escherichia coli K-12 : B3283; DNA topoisomerase	complement(3404385..3404903)	Shigella flexneri 2a str. 2457T	1079764
NP_838777.1	CDS	smg	NC_004741.1	3404956	3405414	R	residues 1 to 152 of 152 are 100.00 pct identical to residues 6 to 157 of 157 from Escherichia coli K-12 : B3284; hypothetical protein	complement(3404956..3405414)	Shigella flexneri 2a str. 2457T	1079765
NP_838778.1	CDS	smf	NC_004741.1	3405401	3406525	R	residues 1 to 374 of 374 are 97.59 pct identical to residues 1 to 374 of 374 from NRprotein_Feb2003 : >ref|NP_289847.1| smf gene product [Escherichia coli O157:H7 EDL933] pir||C85993 hypothetical protein smf [imported] - Escherichia coli (strain O157:H7, substrain EDL933) gb|AAG58407.1|AE005555_7 smf gene product [Escherichia coli O157:H7 EDL933]; DNA protecting protein DprA	complement(3405401..3406525)	Shigella flexneri 2a str. 2457T	1079766
NP_838779.1	CDS	def	NC_004741.1	3406690	3407199	D	cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase	3406690..3407199	Shigella flexneri 2a str. 2457T	1079767
NP_838780.1	CDS	fmt	NC_004741.1	3407214	3408161	D	modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase	3407214..3408161	Shigella flexneri 2a str. 2457T	1079768
NP_838781.1	CDS	sun	NC_004741.1	3408207	3409496	D	catalyzes the methylation of cytosine at position 967 (m5C967) of 16S rRNA; SAM-dependent methyltransferase; 16S rRNA methyltransferase B	3408207..3409496	Shigella flexneri 2a str. 2457T	1078522
NP_838782.1	CDS	trkA	NC_004741.1	3409518	3410894	D	involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; potassium transporter peripheral membrane component	3409518..3410894	Shigella flexneri 2a str. 2457T	1079769
NP_838783.1	CDS	S3547	NC_004741.1	3411075	3411749	D	residues 1 to 224 of 224 are 99.55 pct identical to residues 1 to 224 of 224 from GenPept : >gb|AAL72464.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; ISSfl3 orfA	3411075..3411749	Shigella flexneri 2a str. 2457T	1079770
NP_838784.1	CDS	S3548	NC_004741.1	3411746	3412096	D	residues 1 to 116 of 116 are 100.00 pct identical to residues 1 to 116 of 116 from GenPept : >gb|AAK18528.1|AF348706_217 (AF348706)  IS orf [Shigella flexneri]; ISSfl3 orfB	3411746..3412096	Shigella flexneri 2a str. 2457T	1079771
NP_838785.1	CDS	S3549	NC_004741.1	3412093	3413694	D	residues 1 to 533 of 533 are 96.99 pct identical to residues 1 to 533 of 533 from GenPept : >gb|AAL72376.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; ISSfl3 orfC	3412093..3413694	Shigella flexneri 2a str. 2457T	1079772
NP_838786.1	CDS	lysC	NC_004741.1	3413860	3415209	R	catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; functions in amino acid biosynthesis; lysine sensitive; aspartate kinase III	complement(3413860..3415209)	Shigella flexneri 2a str. 2457T	1079773
NP_838787.1	CDS	pgi	NC_004741.1	3415734	3417383	D	functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase	3415734..3417383	Shigella flexneri 2a str. 2457T	1079774
NP_838788.1	CDS	yjbE	NC_004741.1	3417846	3418088	D	residues 1 to 80 of 80 are 98.75 pct identical to residues 1 to 80 of 80 from Escherichia coli K-12 : B4026; hypothetical protein	3417846..3418088	Shigella flexneri 2a str. 2457T	1076477
NP_838789.1	CDS	yjbF	NC_004741.1	3418172	3418840	D	residues 1 to 222 of 222 are 93.69 pct identical to residues 1 to 222 of 222 from Escherichia coli K-12 : B4027; hypothetical protein	3418172..3418840	Shigella flexneri 2a str. 2457T	1079776
NP_838790.1	CDS	yjbG	NC_004741.1	3418837	3419574	D	residues 1 to 245 of 245 are 90.20 pct identical to residues 1 to 245 of 245 from Escherichia coli K-12 : B4028; hypothetical protein	3418837..3419574	Shigella flexneri 2a str. 2457T	1079410
NP_838791.1	CDS	yjbH	NC_004741.1	3419574	3421670	D	residues 1 to 698 of 698 are 99.57 pct identical to residues 1 to 698 of 698 from Escherichia coli K-12 : B4029; hypothetical protein	3419574..3421670	Shigella flexneri 2a str. 2457T	1079777
NP_838792.1	CDS	yjbA	NC_004741.1	3422265	3422675	D	residues 1 to 136 of 136 are 84.55 pct identical to residues 1 to 136 of 136 from Escherichia coli K-12 : B4030; phosphate-starvation-inducible protein PsiE	3422265..3422675	Shigella flexneri 2a str. 2457T	1080961
NP_838793.1	CDS	xylE	NC_004741.1	3422719	3424194	R	xylose/proton symporter; member of the major facilitator superfamily (MFS) of transporter; D-xylose transporter XylE	complement(3422719..3424194)	Shigella flexneri 2a str. 2457T	1080770
NP_838794.1	CDS	malG	NC_004741.1	3424565	3425455	R	with MalKFE is involved in the transport of maltose into the cell; maltose transporter permease	complement(3424565..3425455)	Shigella flexneri 2a str. 2457T	1079778
NP_838795.1	CDS	malF	NC_004741.1	3425470	3427014	R	with MalKGE is involved in maltose transport into the cell; maltose transporter membrane protein	complement(3425470..3427014)	Shigella flexneri 2a str. 2457T	1079779
NP_838796.1	CDS	malE	NC_004741.1	3427168	3428358	R	functions in the MalKFGE ABC transporter complex to transport maltose into the cell by using ATP hydrolysis; maltose ABC transporter periplasmic protein	complement(3427168..3428358)	Shigella flexneri 2a str. 2457T	1079799
NP_838797.1	CDS	malK	NC_004741.1	3428723	3429838	D	with malEFG is involved in import of maltose/maltodextrin; maltose/maltodextrin transporter ATP-binding protein	3428723..3429838	Shigella flexneri 2a str. 2457T	1079780
NP_838798.1	CDS	lamB	NC_004741.1	3429913	3431250	D	porin involved in the transport of maltose and maltodextrins; maltoporin	3429913..3431250	Shigella flexneri 2a str. 2457T	1079781
NP_838799.1	CDS	malM	NC_004741.1	3431402	3432322	D	residues 1 to 306 of 306 are 80.71 pct identical to residues 1 to 306 of 306 from Escherichia coli K-12 : B4037; maltose regulon periplasmic protein	3431402..3432322	Shigella flexneri 2a str. 2457T	1079782
NP_838800.1	CDS	ubiC	NC_004741.1	3434354	3434851	D	catalyzes the formation of 4-hydroxybenzoate from chorismate; chorismate pyruvate lyase	3434354..3434851	Shigella flexneri 2a str. 2457T	1079290
NP_838801.1	CDS	ubiA	NC_004741.1	3434864	3435736	D	catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate, as part of the ubiquinone biosynthesis pathway; 4-hydroxybenzoate octaprenyltransferase	3434864..3435736	Shigella flexneri 2a str. 2457T	1079784
NP_838802.2	CDS	plsB	NC_004741.1	3435891	3438314	R	PlsB; catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA; glycerol-3-phosphate acyltransferase	complement(3435891..3438314)	Shigella flexneri 2a str. 2457T	1079786
NP_838803.1	CDS	dgkA	NC_004741.1	3438485	3438853	D	residues 1 to 122 of 122 are 90.16 pct identical to residues 1 to 122 of 122 from Escherichia coli K-12 : B4042; diacylglycerol kinase	3438485..3438853	Shigella flexneri 2a str. 2457T	1079787
NP_838804.1	CDS	lexA	NC_004741.1	3438963	3439571	D	Represses a number of genes involved in the response to DNA damage; LexA repressor	3438963..3439571	Shigella flexneri 2a str. 2457T	1079789
NP_838805.2	CDS	dinF	NC_004741.1	3439644	3440969	D	residues 1 to 459 of 459 are 83.22 pct identical to residues 1 to 459 of 459 from Escherichia coli K-12 : B4044; DNA-damage-inducible SOS response protein	3439644..3440969	Shigella flexneri 2a str. 2457T	1079791
NP_838806.1	CDS	yjbJ	NC_004741.1	3441085	3441294	D	unknown function; highly abundant protein in vivo; overexpressed under high NaCl concentrations; part of the sigma S regulon; non-essential; stress-response protein	3441085..3441294	Shigella flexneri 2a str. 2457T	1079792
NP_838807.2	CDS	yjbK	NC_004741.1	3441336	3441851	R	Acts as a negative controlling element, employing Zn(2+) as a cofactor to bind the operator of the repressed genes znuACB; zinc uptake transcriptional repressor	complement(3441336..3441851)	Shigella flexneri 2a str. 2457T	1079794
NP_838808.1	CDS	yjbM	NC_004741.1	3442447	3443154	D	residues 1 to 235 of 235 are 90.63 pct identical to residues 1 to 235 of 235 from Escherichia coli K-12 : B4048; hypothetical protein	3442447..3443154	Shigella flexneri 2a str. 2457T	1079795
NP_838809.1	CDS	yjbN	NC_004741.1	3443535	3444554	D	residues 1 to 339 of 339 are 95.87 pct identical to residues 7 to 345 of 345 from Escherichia coli K-12 : B4049; tRNA-dihydrouridine synthase A	3443535..3444554	Shigella flexneri 2a str. 2457T	1079796
NP_838810.2	CDS	pspG	NC_004741.1	3444688	3444930	D	coordinately regulated along with pspA; PspF-dependent induction in response to secretin overexpression in Yersinia; phage shock protein G	3444688..3444930	Shigella flexneri 2a str. 2457T	1077388
NP_838811.1	CDS	qor	NC_004741.1	3445096	3446079	R	residues 1 to 327 of 327 are 94.49 pct identical to residues 1 to 327 of 327 from Escherichia coli K-12 : B4051; quinone oxidoreductase, NADPH-dependent	complement(3445096..3446079)	Shigella flexneri 2a str. 2457T	1079797
NP_838812.1	CDS	dnaB	NC_004741.1	3446162	3447577	D	unwinds double stranded DNA; replicative DNA helicase	3446162..3447577	Shigella flexneri 2a str. 2457T	1079798
NP_838813.1	CDS	alr	NC_004741.1	3447630	3448709	D	converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase	3447630..3448709	Shigella flexneri 2a str. 2457T	1079800
NP_838814.1	CDS	tyrB	NC_004741.1	3448962	3450155	D	catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase	3448962..3450155	Shigella flexneri 2a str. 2457T	1079801
NP_838815.1	CDS	aphA	NC_004741.1	3451264	3451977	D	Class B; non-specific; catalyzes the dephosphorylation of organic phosphomonoesters; also has phosphotransferase activity; acid phosphatase/phosphotransferase	3451264..3451977	Shigella flexneri 2a str. 2457T	1079802
NP_838816.1	CDS	yjbQ	NC_004741.1	3452088	3452504	D	residues 1 to 138 of 138 are 99.27 pct identical to residues 1 to 138 of 138 from Escherichia coli K-12 : B4056; hypothetical protein	3452088..3452504	Shigella flexneri 2a str. 2457T	1079804
NP_838817.1	CDS	yjbR	NC_004741.1	3452508	3452864	D	residues 1 to 118 of 118 are 99.15 pct identical to residues 1 to 118 of 118 from Escherichia coli K-12 : B4057; hypothetical protein	3452508..3452864	Shigella flexneri 2a str. 2457T	1080937
NP_838818.1	CDS	uvrA	NC_004741.1	3452899	3455721	R	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A	complement(3452899..3455721)	Shigella flexneri 2a str. 2457T	1079805
NP_838819.1	CDS	ssb	NC_004741.1	3455975	3456511	D	binds to single stranded DNA and PriA helcase facilitate replication restart; single-stranded DNA-binding protein	3455975..3456511	Shigella flexneri 2a str. 2457T	1079806
NP_838820.1	CDS	S3585	NC_004741.1	3456619	3457122	R	residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri]; IS1 orfB	complement(3456619..3457122)	Shigella flexneri 2a str. 2457T	1078153
NP_838821.1	CDS	S3586	NC_004741.1	3457041	3457316	R	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(3457041..3457316)	Shigella flexneri 2a str. 2457T	1079807
NP_838822.1	CDS	yjcB	NC_004741.1	3457386	3457736	R	residues 1 to 116 of 116 are 100.00 pct identical to residues 1 to 116 of 116 from Escherichia coli K-12 : B4060; hypothetical protein	complement(3457386..3457736)	Shigella flexneri 2a str. 2457T	1079808
NP_838823.1	CDS	soxS	NC_004741.1	3459676	3459999	R	regulates genes involved in response to oxidative stress; DNA-binding transcriptional regulator SoxS	complement(3459676..3459999)	Shigella flexneri 2a str. 2457T	1076458
NP_838824.1	CDS	soxR	NC_004741.1	3460085	3460549	D	residues 1 to 154 of 154 are 100.00 pct identical to residues 1 to 154 of 154 from Escherichia coli K-12 : B4063; redox-sensing activator of soxS	3460085..3460549	Shigella flexneri 2a str. 2457T	1079812
NP_838825.1	CDS	yjcD	NC_004741.1	3461255	3462604	D	residues 1 to 449 of 449 are 86.63 pct identical to residues 1 to 449 of 449 from Escherichia coli K-12 : B4064; hypothetical protein	3461255..3462604	Shigella flexneri 2a str. 2457T	1079813
NP_838826.1	CDS	yjcE	NC_004741.1	3462755	3464404	D	residues 1 to 527 of 549 are 85.95 pct identical to residues 1 to 527 of 549 from Escherichia coli K-12 : B4065; hypothetical protein	3462755..3464404	Shigella flexneri 2a str. 2457T	1079814
NP_838827.1	CDS	yjcF	NC_004741.1	3464558	3465850	R	residues 1 to 430 of 430 are 85.81 pct identical to residues 1 to 430 of 430 from Escherichia coli K-12 : B4066; hypothetical protein	complement(3464558..3465850)	Shigella flexneri 2a str. 2457T	1079815
NP_838828.1	CDS	actP	NC_004741.1	3466028	3467677	R	member of the sodium:solute symporter family; cotranscribed with the acs gene which encodes acetyl coenzyme A synthase; mutations affect acetate uptake; acetate permease	complement(3466028..3467677)	Shigella flexneri 2a str. 2457T	1078958
NP_838829.1	CDS	yjcH	NC_004741.1	3467674	3467988	R	residues 1 to 104 of 104 are 89.42 pct identical to residues 1 to 104 of 104 from Escherichia coli K-12 : B4068; hypothetical protein	complement(3467674..3467988)	Shigella flexneri 2a str. 2457T	1080963
NP_838830.1	CDS	nrfA	NC_004741.1	3470539	3471975	D	catalyzes the formate-dependent reduction of nitrite to ammonia; cytochrome C552; cytochrome c552	3470539..3471975	Shigella flexneri 2a str. 2457T	1079817
NP_838831.1	CDS	nrfB	NC_004741.1	3472020	3472586	D	part of nitrite reductase complex; NrfB is active at high nitrate conditions; NrfA, B, C, and D are essential for the formate-dependent nitrite reduction to ammonia; cytochrome c nitrite reductase pentaheme subunit	3472020..3472586	Shigella flexneri 2a str. 2457T	1079818
NP_838832.1	CDS	nrfC	NC_004741.1	3472583	3473254	D	residues 1 to 223 of 223 are 100.00 pct identical to residues 1 to 223 of 223 from Escherichia coli K-12 : B4072; Fe-S centers; formate-dependent nitrite reductase	3472583..3473254	Shigella flexneri 2a str. 2457T	1079819
NP_838833.1	CDS	nrfD	NC_004741.1	3473251	3474207	D	residues 1 to 318 of 318 are 86.16 pct identical to residues 1 to 318 of 318 from Escherichia coli K-12 : B4073; formate-dependent nitrate reductase, transmembrane protein	3473251..3474207	Shigella flexneri 2a str. 2457T	1078385
NP_838834.1	CDS	nrfE	NC_004741.1	3474287	3475945	D	with NrfF and NrfG catalyzes the insertion of heme into cytochrome c552; heme lyase subunit NrfE	3474287..3475945	Shigella flexneri 2a str. 2457T	1079820
NP_838835.1	CDS	nrfF	NC_004741.1	3475938	3476321	D	residues 1 to 102 of 127 are 86.27 pct identical to residues 1 to 102 of 127 from Escherichia coli K-12 : B4075; formate-dependent nitrite reductase complex subunit NrfF	3475938..3476321	Shigella flexneri 2a str. 2457T	1079822
NP_838836.1	CDS	nrfG	NC_004741.1	3476318	3476914	D	residues 1 to 198 of 198 are 98.48 pct identical to residues 1 to 198 of 198 from Escherichia coli K-12 : B4076; formate-dependent nitrite reductase complex subunit NrfG	3476318..3476914	Shigella flexneri 2a str. 2457T	1079823
NP_838837.1	CDS	gltP	NC_004741.1	3477256	3478569	D	carrier protein part of the Na(+)-independent, binding-protein-independent glutamate-aspartate transport system; glutamate/aspartate:proton symporter	3477256..3478569	Shigella flexneri 2a str. 2457T	1079824
NP_838838.1	CDS	yjcO	NC_004741.1	3478647	3479315	R	residues 1 to 222 of 222 are 100.00 pct identical to residues 8 to 229 of 229 from Escherichia coli K-12 : B4078; hypothetical protein	complement(3478647..3479315)	Shigella flexneri 2a str. 2457T	1079825
NP_838839.1	CDS	yjcP	NC_004741.1	3481775	3483241	R	part of a multidrug efflux system involved in resistance to acriflavin, puromycin, erytjhromycin and tetraphenylarsonium chloride; member of the outer membrane factor (OMF) family; outer membrane efflux protein MdtP	complement(3481775..3483241)	Shigella flexneri 2a str. 2457T	1079826
NP_838840.2	CDS	yjcQ	NC_004741.1	3483238	3485280	R	possibly part of a tripartite efflux system composed of MdtN, MdtO and MdtP which could be involved in resistance to puromycin, acriflavine and tetraphenylarsonium chloride; multidrug efflux system protein MdtO	complement(3483238..3485280)	Shigella flexneri 2a str. 2457T	1079827
NP_838841.1	CDS	yjcR	NC_004741.1	3485280	3486311	R	with MdtO and MdtP is involved in resistance to puromycin, acriflavine and tetraphenylarsonium chloride; multidrug resistance protein MdtN	complement(3485280..3486311)	Shigella flexneri 2a str. 2457T	1079828
NP_838842.1	CDS	S3609	NC_004741.1	3486478	3486753	D	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	3486478..3486753	Shigella flexneri 2a str. 2457T	1079829
NP_838843.1	CDS	S3610	NC_004741.1	3486672	3487175	D	residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri]; IS1 orfB	3486672..3487175	Shigella flexneri 2a str. 2457T	1079830
NP_838844.1	CDS	phnE	NC_004741.1	3487169	3487393	R	residues 1 to 68 of 74 are 98.52 pct identical to residues 1 to 68 of 206 from Escherichia coli K-12 : B4104; membrane channel protein component of phosphonate transporter	complement(3487169..3487393)	Shigella flexneri 2a str. 2457T	1079831
NP_838845.1	CDS	phnD	NC_004741.1	3487448	3488464	R	residues 1 to 338 of 338 are 98.52 pct identical to residues 1 to 338 of 338 from Escherichia coli K-12 : B4105; periplasmic binding protein component of phosphonate transporter	complement(3487448..3488464)	Shigella flexneri 2a str. 2457T	1079832
NP_838846.1	CDS	phnC	NC_004741.1	3488489	3489277	R	residues 1 to 262 of 262 are 98.09 pct identical to residues 1 to 262 of 262 from Escherichia coli K-12 : B4106; phosphonate/organophosphate ester transporter subunit	complement(3488489..3489277)	Shigella flexneri 2a str. 2457T	1079833
NP_838847.1	CDS	phnB	NC_004741.1	3489410	3489853	R	residues 1 to 147 of 147 are 99.31 pct identical to residues 1 to 147 of 147 from Escherichia coli K-12 : B4107; hypothetical protein	complement(3489410..3489853)	Shigella flexneri 2a str. 2457T	1079834
NP_838848.1	CDS	phnA	NC_004741.1	3490011	3490346	R	residues 1 to 111 of 111 are 100.00 pct identical to residues 1 to 111 of 111 from Escherichia coli K-12 : B4108; hypothetical protein	complement(3490011..3490346)	Shigella flexneri 2a str. 2457T	1079835
NP_838849.1	CDS	yjdA	NC_004741.1	3490749	3492977	D	residues 1 to 742 of 742 are 95.28 pct identical to residues 1 to 742 of 742 from Escherichia coli K-12 : B4109; hypothetical protein	3490749..3492977	Shigella flexneri 2a str. 2457T	1079836
NP_838850.1	CDS	yjcZ	NC_004741.1	3493007	3493852	D	residues 1 to 281 of 281 are 97.15 pct identical to residues 1 to 281 of 281 from Escherichia coli K-12 : B4110; hypothetical protein	3493007..3493852	Shigella flexneri 2a str. 2457T	1079837
NP_838851.1	CDS	proP	NC_004741.1	3494116	3495618	D	residues 1 to 500 of 500 are 97.00 pct identical to residues 1 to 500 of 500 from Escherichia coli K-12 : B4111; proline/glycine betaine transporter	3494116..3495618	Shigella flexneri 2a str. 2457T	1079838
NP_838852.1	CDS	basS	NC_004741.1	3495795	3496895	R	residues 4 to 366 of 366 are 99.17 pct identical to residues 1 to 363 of 363 from Escherichia coli K-12 : B4112; sensor protein BasS/PmrB	complement(3495795..3496895)	Shigella flexneri 2a str. 2457T	1079839
NP_838853.1	CDS	basR	NC_004741.1	3496896	3497564	R	response regulator in two-component regulatory system with BasS; DNA-binding transcriptional regulator BasR	complement(3496896..3497564)	Shigella flexneri 2a str. 2457T	1079840
NP_838854.1	CDS	yjdB	NC_004741.1	3497561	3499234	R	with ZipA and an unidentified 24 kDa protein forms a complex involved in cell division; cell division protein	complement(3497561..3499234)	Shigella flexneri 2a str. 2457T	1079841
NP_838855.1	CDS	yjdE	NC_004741.1	3499308	3500645	R	residues 1 to 445 of 445 are 92.35 pct identical to residues 1 to 445 of 445 from Escherichia coli K-12 : B4115; arginine:agmatin antiporter	complement(3499308..3500645)	Shigella flexneri 2a str. 2457T	1079842
NP_838856.1	CDS	adiY	NC_004741.1	3500782	3501543	R	residues 1 to 253 of 253 are 93.28 pct identical to residues 1 to 253 of 253 from Escherichia coli K-12 : B4116; ARAC-type regulatory protein	complement(3500782..3501543)	Shigella flexneri 2a str. 2457T	1079843
NP_838857.1	CDS	adiA	NC_004741.1	3501868	3504135	R	residues 1 to 755 of 755 are 99.47 pct identical to residues 2 to 756 of 756 from Escherichia coli K-12 : B4117; biodegradative arginine decarboxylase	complement(3501868..3504135)	Shigella flexneri 2a str. 2457T	1079844
NP_838858.1	CDS	melR	NC_004741.1	3504334	3505242	R	residues 1 to 302 of 302 are 99.66 pct identical to residues 1 to 302 of 302 from Escherichia coli K-12 : B4118; DNA-binding transcriptional regulator MelR	complement(3504334..3505242)	Shigella flexneri 2a str. 2457T	1079845
NP_838859.1	CDS	melA	NC_004741.1	3505525	3506880	D	residues 1 to 451 of 451 are 98.89 pct identical to residues 1 to 451 of 451 from Escherichia coli K-12 : B4119; alpha-galactosidase	3505525..3506880	Shigella flexneri 2a str. 2457T	1079846
NP_838860.1	CDS	melB	NC_004741.1	3506995	3508404	D	residues 1 to 469 of 469 are 96.37 pct identical to residues 1 to 469 of 469 from Escherichia coli K-12 : B4120; melibiose:sodium symporter	3506995..3508404	Shigella flexneri 2a str. 2457T	1079847
NP_838861.1	CDS	yjdF	NC_004741.1	3508543	3509172	R	residues 1 to 209 of 209 are 83.25 pct identical to residues 1 to 209 of 209 from Escherichia coli K-12 : B4121; hypothetical protein	complement(3508543..3509172)	Shigella flexneri 2a str. 2457T	1079848
NP_838862.1	CDS	fumB	NC_004741.1	3509295	3510941	R	residues 1 to 548 of 548 are 96.35 pct identical to residues 1 to 548 of 548 from Escherichia coli K-12 : B4122; anaerobic isozyme; fumarase B, fumarate hydratase class I	complement(3509295..3510941)	Shigella flexneri 2a str. 2457T	1079849
NP_838863.1	CDS	dcuB	NC_004741.1	3511019	3512359	R	functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to DcuA; DcuA and DcuB function as independent and mutually redundant C4-dicarboxylate (aspartate, malate, fumarate and succinate) transporters; anaerobic C4-dicarboxylate transporter	complement(3511019..3512359)	Shigella flexneri 2a str. 2457T	1079850
NP_838864.1	CDS	yjdG	NC_004741.1	3512930	3513649	R	response regulator in two-component regulatory system with DcuS; phosphorylated DcuR activates transcription of genes involved in anaerobic fumarate respiration; DNA-binding transcriptional activator DcuR	complement(3512930..3513649)	Shigella flexneri 2a str. 2457T	1079851
NP_838865.1	CDS	yjdH	NC_004741.1	3513646	3515277	R	C4-dicarboxylate-sensing histidine kinase; part of two-component regulatory system with DcuR; regulates anaerobic fumarate respiration; sensory histidine kinase DcuS	complement(3513646..3515277)	Shigella flexneri 2a str. 2457T	1079852
NP_838866.2	CDS	S3633	NC_004741.1	3515692	3516057	D	IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats; insertion sequence 2 OrfA protein	3515692..3516057	Shigella flexneri 2a str. 2457T	1079853
NP_838867.2	CDS	S3634	NC_004741.1	3516015	3516920	D	IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats; insertion element IS2 transposase InsD	3516015..3516920	Shigella flexneri 2a str. 2457T	1079854
NP_838868.1	CDS	yjbC	NC_004741.1	3517246	3518118	R	catalyzes the synthesis of pseudouridine from U-2604 in the 23S ribosomal RNA; 23S rRNA pseudouridine synthase F	complement(3517246..3518118)	Shigella flexneri 2a str. 2457T	1079855
NP_838869.1	CDS	sorC	NC_004741.1	3518466	3519413	D	residues 1 to 315 of 315 are 98.73 pct identical to residues 8 to 322 of 322 from GenPept : >gb|AAG59220.1|AE005634_10 (AE005634)  transcriptional regulator of sorbose uptake and utilization genes [Escherichia coli O157:H7 EDL933]; sor-operon regulator	3518466..3519413	Shigella flexneri 2a str. 2457T	1079856
NP_838870.1	CDS	sorD	NC_004741.1	3519483	3520289	D	Converts D-sorbitol-dphosphate to D-fructose-6-phosphate; sorbitol-6-phosphate 2-dehydrogenase	3519483..3520289	Shigella flexneri 2a str. 2457T	1079857
NP_838871.1	CDS	sorF	NC_004741.1	3520299	3520706	D	residues 1 to 135 of 135 are 97.03 pct identical to residues 1 to 135 of 135 from GenPept : >gb|AAG59218.1|AE005634_8 (AE005634)  sorbose PTS component [Escherichia coli O157:H7 EDL933]; sorbose-permease PTS system IIA component	3520299..3520706	Shigella flexneri 2a str. 2457T	1079858
NP_838872.1	CDS	sorB	NC_004741.1	3520706	3521200	D	residues 1 to 164 of 164 are 99.39 pct identical to residues 1 to 164 of 164 from GenPept : >gb|AAG59217.1|AE005634_7 (AE005634)  sorbose PTS component [Escherichia coli O157:H7 EDL933]; sorbose-permease PTS system IIB component	3520706..3521200	Shigella flexneri 2a str. 2457T	1079859
NP_838873.1	CDS	sorA	NC_004741.1	3521323	3522063	D	residues 1 to 246 of 246 are 86.99 pct identical to residues 20 to 265 of 265 from GenPept : >gb|AAG59216.1|AE005634_6 (AE005634)  sorbose PTS component [Escherichia coli O157:H7 EDL933]; sorbose-permease PTS system IIC component	3521323..3522063	Shigella flexneri 2a str. 2457T	1079860
NP_838874.1	CDS	sorM	NC_004741.1	3522074	3522862	D	residues 1 to 262 of 262 are 82.48 pct identical to residues 1 to 274 of 274 from GenPept : >gb|AAG59215.1|AE005634_5 (AE005634)  sorbose PTS component [Escherichia coli O157:H7 EDL933]; sorbose-permease PTS system IID component	3522074..3522862	Shigella flexneri 2a str. 2457T	1079861
NP_838875.1	CDS	sorE	NC_004741.1	3522914	3524143	D	residues 1 to 409 of 409 are 95.11 pct identical to residues 5 to 413 of 413 from GenPept : >gb|AAG59214.1|AE005634_4 (AE005634) L-sorbose-1-P-reductase [Escherichia coli O157:H7 EDL933]; L-sorbose-1-P-reductase	3522914..3524143	Shigella flexneri 2a str. 2457T	1079862
NP_838876.1	CDS	pepE	NC_004741.1	3524525	3525214	D	alpha-aspartyl dipeptidase; catalyzes the hydrolysis of dipeptides with an N-terminal aspartate residue; belongs to peptidase S51 family; peptidase E	3524525..3525214	Shigella flexneri 2a str. 2457T	1079863
NP_838877.1	CDS	yjbB	NC_004741.1	3525305	3526936	R	residues 16 to 543 of 543 are 87.50 pct identical to residues 16 to 543 of 543 from Escherichia coli K-12 : B4020; alpha helix protein	complement(3525305..3526936)	Shigella flexneri 2a str. 2457T	1079864
NP_838878.1	CDS	metH	NC_004741.1	3527156	3530839	R	one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; B12-dependent methionine synthase	complement(3527156..3530839)	Shigella flexneri 2a str. 2457T	1079865
NP_838879.2	CDS	iclR	NC_004741.1	3531039	3531863	D	regulates the glyoxylate bypass operon (aceBAK), which encodes isocitrate lyase, malate synthase and isocitrate dehydrogenase kinase/phosphorylase; IclR family transcriptional regulator	3531039..3531863	Shigella flexneri 2a str. 2457T	1079866
NP_838880.1	CDS	aceA	NC_004741.1	3536254	3537558	R	Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates; isocitrate lyase	complement(3536254..3537558)	Shigella flexneri 2a str. 2457T	1079869
NP_838881.1	CDS	metA	NC_004741.1	3539458	3540387	R	catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis; homoserine O-succinyltransferase	complement(3539458..3540387)	Shigella flexneri 2a str. 2457T	1079871
NP_838882.1	CDS	yjaB	NC_004741.1	3540544	3540987	D	residues 1 to 146 of 147 are 96.57 pct identical to residues 1 to 146 of 147 from Escherichia coli K-12 : B4012; hypothetical protein	3540544..3540987	Shigella flexneri 2a str. 2457T	1079872
NP_838883.1	CDS	purH	NC_004741.1	3546727	3548316	D	involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	3546727..3548316	Shigella flexneri 2a str. 2457T	1079877
NP_838884.1	CDS	purD	NC_004741.1	3548328	3549617	D	catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase	3548328..3549617	Shigella flexneri 2a str. 2457T	1079878
NP_838885.1	CDS	hydG	NC_004741.1	3549614	3550939	R	DNA-binding response regulator in two-component regulatory system with ZraS; response regulator/sigma54 interaction protein; transcriptional regulatory protein ZraR	complement(3549614..3550939)	Shigella flexneri 2a str. 2457T	1079879
NP_838886.1	CDS	hydH	NC_004741.1	3550936	3552312	R	residues 1 to 458 of 458 are 74.40 pct identical to residues 1 to 465 of 465 from Escherichia coli K-12 : B4003; sensor protein ZraS	complement(3550936..3552312)	Shigella flexneri 2a str. 2457T	1079880
NP_838887.2	CDS	zraP	NC_004741.1	3552550	3552975	D	residues 1 to 166 of 188 are 91.56 pct identical to residues 1 to 166 of 188 from Escherichia coli K-12 : B4002; zinc resistance protein	3552550..3552975	Shigella flexneri 2a str. 2457T	1079881
NP_838888.1	CDS	yjaH	NC_004741.1	3552977	3553672	R	residues 1 to 231 of 231 are 94.37 pct identical to residues 1 to 231 of 231 from Escherichia coli K-12 : B4001; hypothetical protein	complement(3552977..3553672)	Shigella flexneri 2a str. 2457T	1079882
NP_838889.1	CDS	hupA	NC_004741.1	3553685	3553957	R	histone-like DNA-binding protein; transcriptional regulator HU subunit alpha	complement(3553685..3553957)	Shigella flexneri 2a str. 2457T	1079883
NP_838890.1	CDS	yjaG	NC_004741.1	3554144	3554734	R	residues 1 to 196 of 196 are 98.97 pct identical to residues 1 to 196 of 196 from Escherichia coli K-12 : B3999; hypothetical protein	complement(3554144..3554734)	Shigella flexneri 2a str. 2457T	1079884
NP_838891.1	CDS	nfi	NC_004741.1	3554777	3555448	R	Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA; cleaves DNA containing urea residues, AP sites, base mismatches, insertion/deletion mismatches, flaps, and pseudo-Y structures; endonuclease V	complement(3554777..3555448)	Shigella flexneri 2a str. 2457T	1079885
NP_838892.1	CDS	hemE	NC_004741.1	3555605	3556669	R	catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase	complement(3555605..3556669)	Shigella flexneri 2a str. 2457T	1079886
NP_838893.1	CDS	nudC	NC_004741.1	3556709	3557482	R	can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH; requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5'-phosphates; NADH pyrophosphatase	complement(3556709..3557482)	Shigella flexneri 2a str. 2457T	1079887
NP_838894.1	CDS	yjaE	NC_004741.1	3557577	3558053	D	binds specifically to the major sigma factor sigma 70; active in stationary phase; anti-RNA polymerase sigma 70 factor	3557577..3558053	Shigella flexneri 2a str. 2457T	1079888
NP_838895.1	CDS	thiC	NC_004741.1	3558287	3560182	D	required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC	3558287..3560182	Shigella flexneri 2a str. 2457T	1079889
NP_838896.1	CDS	thiE	NC_004741.1	3560182	3560817	D	catalyzes the formation of thiamine monophosphate from 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate; thiamine-phosphate pyrophosphorylase	3560182..3560817	Shigella flexneri 2a str. 2457T	1079890
NP_838897.1	CDS	thiF	NC_004741.1	3560810	3561565	D	catalyzes the adenylation of ThiS which is involved in the formation of 5-methyl-4-(beta-hydroxyethyl)thiazole phosphate; thiamine biosynthesis protein ThiF	3560810..3561565	Shigella flexneri 2a str. 2457T	1079891
NP_838898.2	CDS	thiG	NC_004741.1	3561751	3562521	D	functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase	3561751..3562521	Shigella flexneri 2a str. 2457T	1079892
NP_838899.1	CDS	thiH	NC_004741.1	3562518	3563651	D	in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center; thiamine biosynthesis protein ThiH	3562518..3563651	Shigella flexneri 2a str. 2457T	1079893
NP_838900.1	CDS	rpoC	NC_004741.1	3563893	3568116	R	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta'	complement(3563893..3568116)	Shigella flexneri 2a str. 2457T	1079894
NP_838901.1	CDS	rpoB	NC_004741.1	3568193	3572221	R	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta	complement(3568193..3572221)	Shigella flexneri 2a str. 2457T	1079895
NP_838902.1	CDS	rplL	NC_004741.1	3572541	3572906	R	present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12	complement(3572541..3572906)	Shigella flexneri 2a str. 2457T	1079896
NP_838903.1	CDS	rplJ	NC_004741.1	3572973	3573470	R	binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10	complement(3572973..3573470)	Shigella flexneri 2a str. 2457T	1079897
NP_838904.1	CDS	rplA	NC_004741.1	3573883	3574587	R	in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1	complement(3573883..3574587)	Shigella flexneri 2a str. 2457T	1079898
NP_838905.1	CDS	rplK	NC_004741.1	3574591	3575019	R	binds directly to 23S ribosomal RNA; 50S ribosomal protein L11	complement(3574591..3575019)	Shigella flexneri 2a str. 2457T	1079899
NP_838906.1	CDS	nusG	NC_004741.1	3575178	3575723	R	Modulates Rho-dependent transcription termination; transcription antitermination protein NusG	complement(3575178..3575723)	Shigella flexneri 2a str. 2457T	1079733
NP_838907.1	CDS	secE	NC_004741.1	3575725	3576108	R	forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE	complement(3575725..3576108)	Shigella flexneri 2a str. 2457T	1080964
NP_838908.1	CDS	tuf	NC_004741.1	3576338	3577522	R	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu	complement(3576338..3577522)	Shigella flexneri 2a str. 2457T	1079900
NP_838909.1	CDS	S3687	NC_004741.1	3578098	3578253	D	residues 1 to 51 of 51 are 98.03 pct identical to residues 1 to 51 of 51 from Escherichia coli K-12 : B3975; hypothetical protein	3578098..3578253	Shigella flexneri 2a str. 2457T	1079022
NP_838910.1	CDS	coaA	NC_004741.1	3578464	3579390	D	catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis; pantothenate kinase	3578464..3579390	Shigella flexneri 2a str. 2457T	1079904
NP_838911.1	CDS	birA	NC_004741.1	3579419	3580384	R	catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon; biotin--protein ligase	complement(3579419..3580384)	Shigella flexneri 2a str. 2457T	1079905
NP_838912.1	CDS	murB	NC_004741.1	3580381	3581409	R	catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase	complement(3580381..3581409)	Shigella flexneri 2a str. 2457T	1079906
NP_838913.2	CDS	murI	NC_004741.1	3586922	3587779	R	converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase	complement(3586922..3587779)	Shigella flexneri 2a str. 2457T	1079914
NP_838914.1	CDS	btuB	NC_004741.1	3587724	3589568	R	involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space; vitamin B12/cobalamin outer membrane transporter	complement(3587724..3589568)	Shigella flexneri 2a str. 2457T	1080549
NP_838915.1	CDS	trmA	NC_004741.1	3589937	3591037	D	catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs; tRNA (uracil-5-)-methyltransferase	3589937..3591037	Shigella flexneri 2a str. 2457T	1080805
NP_838916.1	CDS	yijD	NC_004741.1	3591077	3591436	R	residues 1 to 119 of 119 are 99.15 pct identical to residues 1 to 119 of 119 from Escherichia coli K-12 : B3964; hypothetical protein	complement(3591077..3591436)	Shigella flexneri 2a str. 2457T	1079915
NP_838917.1	CDS	yijC	NC_004741.1	3591436	3592140	R	negatively controls the expression of fabA and fabB, genes involved in the unsaturated fatty acid biosynthesis; DNA-binding transcriptional repressor FabR	complement(3591436..3592140)	Shigella flexneri 2a str. 2457T	1079913
NP_838918.2	CDS	udhA	NC_004741.1	3592407	3593807	D	catalyzes the conversion of NADPH to NADH; soluble pyridine nucleotide transhydrogenase	3592407..3593807	Shigella flexneri 2a str. 2457T	1079916
NP_838919.1	CDS	oxyR	NC_004741.1	3593790	3594707	R	Activates the expression of a regulon of hydrogen peroxide-inducible genes such as katG, gor, ahpC, ahpF, oxyS, dps, fur and grxA; DNA-binding transcriptional regulator OxyR	complement(3593790..3594707)	Shigella flexneri 2a str. 2457T	1079917
NP_838920.1	CDS	S3704	NC_004741.1	3595902	3596405	R	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAL72450.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS1 orfB	complement(3595902..3596405)	Shigella flexneri 2a str. 2457T	1076452
NP_838921.1	CDS	S3705	NC_004741.1	3596324	3596599	R	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(3596324..3596599)	Shigella flexneri 2a str. 2457T	1079920
NP_838922.1	CDS	S3707	NC_004741.1	3597087	3598301	R	residues 1 to 404 of 404 are 90.59 pct identical to residues 1 to 404 of 404 from Escherichia coli K-12 : B1581; sensor protein	complement(3597087..3598301)	Shigella flexneri 2a str. 2457T	1079921
NP_838923.1	CDS	S3708	NC_004741.1	3598709	3600037	R	residues 1 to 442 of 442 are 99.54 pct identical to residues 7 to 448 of 448 from GenPept : >gb|AAK18333.1|AF348706_22 (AF348706) IS4 orf [Shigella flexneri]; IS4 orf	complement(3598709..3600037)	Shigella flexneri 2a str. 2457T	1077001
NP_838924.1	CDS	argH	NC_004741.1	3600239	3601612	R	catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase	complement(3600239..3601612)	Shigella flexneri 2a str. 2457T	1079922
NP_838925.1	CDS	argB	NC_004741.1	3601673	3602446	R	catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase	complement(3601673..3602446)	Shigella flexneri 2a str. 2457T	1079923
NP_838926.1	CDS	argC	NC_004741.1	3602457	3603461	R	catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase	complement(3602457..3603461)	Shigella flexneri 2a str. 2457T	1079925
NP_838927.1	CDS	argE	NC_004741.1	3603615	3604766	D	catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis; acetylornithine deacetylase	3603615..3604766	Shigella flexneri 2a str. 2457T	1079926
NP_838928.1	CDS	ppc	NC_004741.1	3605118	3607769	D	catalyzes the formation of oxaloacetate from phosphoenolpyruvate; phosphoenolpyruvate carboxylase	3605118..3607769	Shigella flexneri 2a str. 2457T	1079927
NP_838929.1	CDS	yijP	NC_004741.1	3607952	3609685	D	residues 1 to 577 of 577 are 94.80 pct identical to residues 1 to 577 of 577 from Escherichia coli K-12 : B3955; hypothetical protein	3607952..3609685	Shigella flexneri 2a str. 2457T	1079928
NP_838930.1	CDS	yijO	NC_004741.1	3609834	3610685	D	residues 1 to 283 of 283 are 98.58 pct identical to residues 1 to 283 of 283 from Escherichia coli K-12 : B3954; ARAC-type regulatory protein	3609834..3610685	Shigella flexneri 2a str. 2457T	1079929
NP_838931.1	CDS	frwD	NC_004741.1	3610672	3611013	R	FrwD with FrwB, FrwC and PtsA forms a PEP-dependent sugar phosphotransferase system permease which may phosphorylate and transport sugars into the cell; phosphorylated by EIIA; FrwB homolog; fructose-like phosphotransferase EIIB subunit 3	complement(3610672..3611013)	Shigella flexneri 2a str. 2457T	1079930
NP_838932.1	CDS	pflC	NC_004741.1	3611015	3611893	R	residues 1 to 292 of 292 are 94.86 pct identical to residues 1 to 292 of 292 from Escherichia coli K-12 : B3952; pyruvate formate lyase II activase	complement(3611015..3611893)	Shigella flexneri 2a str. 2457T	1079931
NP_838933.1	CDS	pflD	NC_004741.1	3611859	3614156	R	involved in production of D-lactate from glucose under microaerobic conditions; cytoplasmic protein; formate acetyltransferase 2	complement(3611859..3614156)	Shigella flexneri 2a str. 2457T	1079982
NP_838934.1	CDS	frwB	NC_004741.1	3614207	3614527	R	FrwB with FrwC, FrwD and PtsA forms a PEP-dependent sugar phosphotransferase system (PTS) permease which may phosphorylate and transport sugars into the cell; cytoplasmic protein that interacts with complex EIIA; contains the second phosphorylation site of the PTS; fructose-like phosphotransferase EIIB subunit 2	complement(3614207..3614527)	Shigella flexneri 2a str. 2457T	1079932
NP_838935.1	CDS	frwC	NC_004741.1	3614542	3615621	R	FrwC with FrwB, FrwD and PtsA forms a PEP-dependent sugar phosphotransferase system permease which may phosphorylate and transport sugars into the cell; forms translocation channel and contains the specific substrate-binding site; fructose-like permease EIIC subunit 2	complement(3614542..3615621)	Shigella flexneri 2a str. 2457T	1079933
NP_838936.1	CDS	katG	NC_004741.1	3622125	3624305	R	residues 1 to 726 of 726 are 96.28 pct identical to residues 1 to 726 of 726 from Escherichia coli K-12 : B3942; catalase; hydroperoxidase HPI(I)	complement(3622125..3624305)	Shigella flexneri 2a str. 2457T	1079940
NP_838937.1	CDS	metF	NC_004741.1	3624634	3625524	R	MTHFR; catalyzes NADH-linked reduction of 5,10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor; 5,10-methylenetetrahydrofolate reductase	complement(3624634..3625524)	Shigella flexneri 2a str. 2457T	1079941
NP_838938.1	CDS	metL	NC_004741.1	3625873	3628305	R	multifunctional homodimeric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; bifunctional aspartate kinase II/homoserine dehydrogenase II	complement(3625873..3628305)	Shigella flexneri 2a str. 2457T	1079942
NP_838939.1	CDS	metB	NC_004741.1	3628308	3629468	R	catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine; cystathionine gamma-synthase	complement(3628308..3629468)	Shigella flexneri 2a str. 2457T	1079943
NP_838940.1	CDS	metJ	NC_004741.1	3629745	3630062	D	when combined with S-adenosylmethionine represses the expression of the methionine regulon and of proteins involved in S-adenosylmethionine synthesis; transcriptional repressor protein MetJ	3629745..3630062	Shigella flexneri 2a str. 2457T	1079944
NP_838941.1	CDS	yiiX	NC_004741.1	3630246	3630854	D	member of the NlpC/P60 superfamily of peptidases; peptidoglycan peptidase	3630246..3630854	Shigella flexneri 2a str. 2457T	1079945
NP_838942.1	CDS	rpmE	NC_004741.1	3630915	3631127	R	RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31	complement(3630915..3631127)	Shigella flexneri 2a str. 2457T	1079946
NP_838943.1	CDS	priA	NC_004741.1	3631330	3633528	D	binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA	3631330..3633528	Shigella flexneri 2a str. 2457T	1079391
NP_838944.1	CDS	cytR	NC_004741.1	3633684	3634709	D	negatively controls the transcription initiation of genes such as deoCABD, udp, and cdd encoding catabolizing enzymes and nupC, nupG, and tsx encoding transporting and pore-forming proteins; DNA-binding transcriptional regulator CytR	3633684..3634709	Shigella flexneri 2a str. 2457T	1080973
NP_838945.1	CDS	ftsN	NC_004741.1	3634801	3635760	D	residues 1 to 319 of 319 are 76.48 pct identical to residues 1 to 319 of 319 from Escherichia coli K-12 : B3933; essential cell division protein FtsN	3634801..3635760	Shigella flexneri 2a str. 2457T	1079947
NP_838946.1	CDS	hslV	NC_004741.1	3635853	3636383	D	heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit	3635853..3636383	Shigella flexneri 2a str. 2457T	1079949
NP_838947.1	CDS	hslU	NC_004741.1	3636393	3637724	D	heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU	3636393..3637724	Shigella flexneri 2a str. 2457T	1079950
NP_838948.1	CDS	menA	NC_004741.1	3637791	3638717	D	catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate; 1,4-dihydroxy-2-naphthoate octaprenyltransferase	3637791..3638717	Shigella flexneri 2a str. 2457T	1079951
NP_838949.1	CDS	menG	NC_004741.1	3638810	3639295	D	regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity; ribonuclease activity regulator protein RraA	3638810..3639295	Shigella flexneri 2a str. 2457T	1078436
NP_838950.1	CDS	yiiU	NC_004741.1	3639380	3639625	R	residues 1 to 81 of 81 are 100.00 pct identical to residues 1 to 81 of 81 from Escherichia coli K-12 : B3928; hypothetical protein	complement(3639380..3639625)	Shigella flexneri 2a str. 2457T	1079952
NP_838951.1	CDS	glpF	NC_004741.1	3640051	3640695	D	residues 1 to 214 of 214 are 91.12 pct identical to residues 1 to 214 of 281 from Escherichia coli K-12 : B3927; glycerol diffusion facilitator protein	3640051..3640695	Shigella flexneri 2a str. 2457T	1079953
NP_838952.1	CDS	glpK	NC_004741.1	3640919	3642427	D	Converts glycerol and ADP to glycerol-3-phosphate and ADP; glycerol kinase	3640919..3642427	Shigella flexneri 2a str. 2457T	1079954
NP_838953.1	CDS	glpX	NC_004741.1	3642657	3643667	D	type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II	3642657..3643667	Shigella flexneri 2a str. 2457T	1079955
NP_838954.1	CDS	fpr	NC_004741.1	3643764	3644510	D	residues 1 to 248 of 248 are 99.19 pct identical to residues 1 to 248 of 248 from Escherichia coli K-12 : B3924; ferredoxin-NADP reductase	3643764..3644510	Shigella flexneri 2a str. 2457T	1079956
NP_838955.1	CDS	yiiT	NC_004741.1	3644515	3644943	R	with UspC and Usp E is involved in resistance to UV radiation; universal stress protein UspD	complement(3644515..3644943)	Shigella flexneri 2a str. 2457T	1079957
NP_838956.1	CDS	yiiS	NC_004741.1	3644970	3645269	R	residues 1 to 99 of 99 are 85.85 pct identical to residues 1 to 99 of 99 from Escherichia coli K-12 : B3922; hypothetical protein	complement(3644970..3645269)	Shigella flexneri 2a str. 2457T	1079958
NP_838957.1	CDS	yiiQ	NC_004741.1	3646022	3646621	D	residues 1 to 199 of 199 are 95.97 pct identical to residues 1 to 199 of 199 from Escherichia coli K-12 : B3920; hypothetical protein	3646022..3646621	Shigella flexneri 2a str. 2457T	1079960
NP_838958.1	CDS	tpiA	NC_004741.1	3646729	3647496	D	Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase	3646729..3647496	Shigella flexneri 2a str. 2457T	1079961
NP_838959.1	CDS	cdh	NC_004741.1	3647551	3648306	R	residues 1 to 251 of 251 are 90.83 pct identical to residues 1 to 251 of 251 from Escherichia coli K-12 : B3918; CDP-diacylglycerol pyrophosphatase	complement(3647551..3648306)	Shigella flexneri 2a str. 2457T	1079963
NP_838960.1	CDS	sbp	NC_004741.1	3648413	3649402	R	residues 1 to 329 of 329 are 96.65 pct identical to residues 1 to 329 of 329 from Escherichia coli K-12 : B3917; sulfate transporter subunit	complement(3648413..3649402)	Shigella flexneri 2a str. 2457T	1079964
NP_838961.1	CDS	pfkA	NC_004741.1	3649722	3650666	R	catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis; 6-phosphofructokinase	complement(3649722..3650666)	Shigella flexneri 2a str. 2457T	1079965
NP_838962.1	CDS	fieF	NC_004741.1	3650865	3651767	R	member of cation diffusion facilitator family; CDF; membrane-bound; induced by both zinc and iron, but does not induce resistance to zinc; can transport zinc(II) in a proton-dependent manner; instead this protein induces iron resistance; forms dimers; ferrous iron efflux protein F	complement(3650865..3651767)	Shigella flexneri 2a str. 2457T	1079966
NP_838963.2	CDS	cpxP	NC_004741.1	3651915	3652415	R	repressor of the Cpx envelope stress response pathway which occurs via periplasmic interactions with CpxA; CpxP is degraded by DegP protease especially in the presence of misfolded substrates; periplasmic repressor CpxP	complement(3651915..3652415)	Shigella flexneri 2a str. 2457T	1079967
NP_838964.1	CDS	cpxR	NC_004741.1	3652565	3653263	D	response regulator in two-component regulatory system with CpxA; part of the envelope stress response system; DNA-binding transcriptional regulator CpxR	3652565..3653263	Shigella flexneri 2a str. 2457T	1079969
NP_838965.1	CDS	cpxA	NC_004741.1	3653260	3654633	D	part of two-component CpxA/CpxR system; senses envelope stress; upregulates a number of periplasmic folding and trafficking factors; two-component sensor protein	3653260..3654633	Shigella flexneri 2a str. 2457T	1079971
NP_838966.1	CDS	yiiM	NC_004741.1	3654739	3655413	R	residues 1 to 224 of 224 are 92.85 pct identical to residues 11 to 234 of 234 from Escherichia coli K-12 : B3910; hypothetical protein	complement(3654739..3655413)	Shigella flexneri 2a str. 2457T	1079973
NP_838967.2	CDS	S3760	NC_004741.1	3655640	3656005	D	IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats; insertion sequence 2 OrfA protein	3655640..3656005	Shigella flexneri 2a str. 2457T	1079974
NP_838968.2	CDS	S3761	NC_004741.1	3655963	3656868	D	IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats; insertion element IS2 transposase InsD	3655963..3656868	Shigella flexneri 2a str. 2457T	1079975
NP_838969.1	CDS	kdgT	NC_004741.1	3656898	3657881	R	transports degraded pectin products into the bacterial cell; 2-keto-3-deoxygluconate permease	complement(3656898..3657881)	Shigella flexneri 2a str. 2457T	1079976
NP_838970.1	CDS	sodA	NC_004741.1	3658141	3658761	R	SodA; manganese binding; only present under aerobic conditions; destroys free radicals; superoxide dismutase	complement(3658141..3658761)	Shigella flexneri 2a str. 2457T	1079977
NP_838971.1	CDS	rhaR	NC_004741.1	3660077	3661015	R	activates the expression of rhaRS in response to L-rhamnose; transcriptional activator RhaR	complement(3660077..3661015)	Shigella flexneri 2a str. 2457T	1079980
NP_838972.1	CDS	rhaS	NC_004741.1	3660999	3661835	R	activates the expression of the rhaBAD operon and rhaT gene; transcriptional activator RhaS	complement(3660999..3661835)	Shigella flexneri 2a str. 2457T	1079981
NP_838973.1	CDS	rhaB	NC_004741.1	3662123	3663592	D	catalyzes the ATP-dependent phosphorylation of rhamnulose; rhamnulokinase	3662123..3663592	Shigella flexneri 2a str. 2457T	1079984
NP_838974.1	CDS	rhaA	NC_004741.1	3663589	3664848	D	catalyzes the formation of L-rhamnulose from L-rhamnose; L-rhamnose isomerase	3663589..3664848	Shigella flexneri 2a str. 2457T	1079985
NP_838975.1	CDS	rhaD	NC_004741.1	3665273	3665914	D	residues 1 to 213 of 213 are 99.06 pct identical to residues 62 to 274 of 274 from Escherichia coli K-12 : B3902; rhamnulose-1-phosphate aldolase	3665273..3665914	Shigella flexneri 2a str. 2457T	1079986
NP_838976.1	CDS	yiiL	NC_004741.1	3665924	3666238	D	residues 1 to 104 of 104 are 99.03 pct identical to residues 1 to 104 of 104 from Escherichia coli K-12 : B3901; hypothetical protein	3665924..3666238	Shigella flexneri 2a str. 2457T	1079987
NP_838977.1	CDS	frvA	NC_004741.1	3666539	3666985	D	with FrvBRX is part of the phosphoenolpyruvate-dependent sugar phosphotransferase system involved in the transport and phosphorylation of sugars; possibly responsible for the sugar specificity of the system; fructose-like phosphotransferase system subunit EIIA	3666539..3666985	Shigella flexneri 2a str. 2457T	1079988
NP_838978.1	CDS	frvB	NC_004741.1	3666996	3668447	D	residues 1 to 483 of 483 are 94.20 pct identical to residues 3 to 485 of 485 from Escherichia coli K-12 : B3899; PTS transporter components IIBC	3666996..3668447	Shigella flexneri 2a str. 2457T	1079989
NP_838979.1	CDS	frvX	NC_004741.1	3668437	3669507	D	with FrvABR is part of the phosphoenolpyruvate-dependent sugar phosphotransferase system which may be involved in the transport and phosphorylation of sugars; fructose-specific phosphotransferase system protein FrvX	3668437..3669507	Shigella flexneri 2a str. 2457T	1079990
NP_838980.1	CDS	frvR	NC_004741.1	3669507	3670157	D	residues 1 to 210 of 216 are 95.23 pct identical to residues 1 to 210 of 582 from Escherichia coli K-12 : B3897; frv operon regulatory protein	3669507..3670157	Shigella flexneri 2a str. 2457T	1079991
NP_838981.1	CDS	S3775	NC_004741.1	3670191	3670466	D	residues 1 to 91 of 91 are 98.90 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	3670191..3670466	Shigella flexneri 2a str. 2457T	1079992
NP_838982.1	CDS	S3776	NC_004741.1	3670385	3670888	D	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18549.1|AF348706_238 (AF348706) iso-IS1 orfB [Shigella flexneri]; IS1 orfB	3670385..3670888	Shigella flexneri 2a str. 2457T	1079993
NP_838983.1	CDS	fdhD	NC_004741.1	3670960	3671793	R	involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth; formate dehydrogenase accessory protein	complement(3670960..3671793)	Shigella flexneri 2a str. 2457T	1080955
NP_838984.1	CDS	fdoG	NC_004741.1	3671987	3675037	D	residues 1 to 1016 of 1016 are 99.61 pct identical to residues 1 to 1016 of 1016 from Escherichia coli K-12 : B3894; selenocysteine; formate dehydrogenase-O, major subunit	3671987..3675037	Shigella flexneri 2a str. 2457T	1080965
NP_838985.1	CDS	fdoH	NC_004741.1	3675050	3675952	D	residues 1 to 284 of 300 are 96.12 pct identical to residues 1 to 284 of 300 from Escherichia coli K-12 : B3893; formate dehydrogenase-O, iron-sulfur subunit	3675050..3675952	Shigella flexneri 2a str. 2457T	1079994
NP_838986.1	CDS	fdoI	NC_004741.1	3675949	3676584	D	cytochrome b556(FDO) component; heme containing; formate dehydrogenase-O subunit gamma	3675949..3676584	Shigella flexneri 2a str. 2457T	1079995
NP_838987.1	CDS	fdhE	NC_004741.1	3676581	3677510	D	required for the formation of active formate dehydrogenase; formate dehydrogenase accessory protein FdhE	3676581..3677510	Shigella flexneri 2a str. 2457T	1080020
NP_838988.1	CDS	yiiF	NC_004741.1	3677840	3678082	R	residues 1 to 80 of 80 are 100.00 pct identical to residues 1 to 80 of 80 from Escherichia coli K-12 : B3890; hypothetical protein	complement(3677840..3678082)	Shigella flexneri 2a str. 2457T	1079996
NP_838989.1	CDS	yiiE	NC_004741.1	3678300	3678545	R	residues 1 to 81 of 81 are 98.76 pct identical to residues 1 to 81 of 81 from Escherichia coli K-12 : B3889; hypothetical protein	complement(3678300..3678545)	Shigella flexneri 2a str. 2457T	1079997
NP_838990.1	CDS	S4827	NC_004741.1	3679197	3680342	R	residues 78 to 381 of 381 are 94.73 pct identical to residues 1 to 304 of 304 from NRprotein_Feb03 : >ref|NP_290516.1| Z5429 gene product [Escherichia coli O157:H7 EDL933] ref|NP_312840.1| hypothetical protein [Escherichia coli O157:H7] pir||D86077 hypothetical protein Z5429 [imported] - Escherichia coli (strain O157:H7, substrain EDL933) pir||E91230 hypothetical protein ECs4813 [imported] - Escher; hypothetical protein	complement(3679197..3680342)	Shigella flexneri 2a str. 2457T	1079998
NP_838991.1	CDS	S4828	NC_004741.1	3680500	3680751	R	residues 1 to 75 of 83 are 97.33 pct identical to residues 121 to 195 of 330 from NRprotein_Feb03 : >ref|NP_290515.1| Z5428 gene product [Escherichia coli O157:H7 EDL933] pir||C86077 hypothetical protein Z5428 [imported] - Escherichia coli (strain O157:H7, substrain EDL933) gb|AAG59079.1|AE005620_1 Z5428 gene product [Escherichia coli O157:H7 EDL933]; hypothetical protein	complement(3680500..3680751)	Shigella flexneri 2a str. 2457T	1079999
NP_838992.1	CDS	S3784	NC_004741.1	3680897	3681172	D	residues 1 to 91 of 91 are 98.90 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	3680897..3681172	Shigella flexneri 2a str. 2457T	1080000
NP_838993.1	CDS	S3785	NC_004741.1	3681091	3681594	D	residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri]; IS1 orfB	3681091..3681594	Shigella flexneri 2a str. 2457T	1080001
NP_838994.1	CDS	yiiD	NC_004741.1	3682136	3683125	R	residues 1 to 329 of 329 are 99.08 pct identical to residues 1 to 329 of 329 from Escherichia coli K-12 : B3888; acetyltransferase	complement(3682136..3683125)	Shigella flexneri 2a str. 2457T	1080936
NP_838995.1	CDS	yihZ	NC_004741.1	3683122	3683559	R	hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase	complement(3683122..3683559)	Shigella flexneri 2a str. 2457T	1080002
NP_838996.1	CDS	rbn	NC_004741.1	3683556	3684428	R	RNase BN; required for 3' maturation of certain phage T4-encoded tRNAs; forms a dimer; specific for immature tRNA substrates containing incorrect residues within the universal CCA sequence; 3' to 5' exoribonuclease; ribonuclease BN	complement(3683556..3684428)	Shigella flexneri 2a str. 2457T	1080003
NP_838997.1	CDS	yihX	NC_004741.1	3684422	3685021	R	residues 1 to 199 of 199 are 100.00 pct identical to residues 8 to 206 of 206 from Escherichia coli K-12 : B3885; phosphatase	complement(3684422..3685021)	Shigella flexneri 2a str. 2457T	1080004
NP_838998.1	CDS	yihW	NC_004741.1	3685120	3685905	R	residues 1 to 261 of 261 are 99.61 pct identical to residues 9 to 269 of 269 from Escherichia coli K-12 : B3884; DEOR-type transcriptional regulator	complement(3685120..3685905)	Shigella flexneri 2a str. 2457T	1080005
NP_838999.1	CDS	yihV	NC_004741.1	3685939	3686835	R	residues 1 to 298 of 298 are 89.93 pct identical to residues 3 to 300 of 300 from Escherichia coli K-12 : B3883; kinase	complement(3685939..3686835)	Shigella flexneri 2a str. 2457T	1080006
NP_839000.1	CDS	yihU	NC_004741.1	3687003	3687899	D	residues 1 to 298 of 298 are 90.60 pct identical to residues 1 to 298 of 298 from Escherichia coli K-12 : B3882; dehydrogenase	3687003..3687899	Shigella flexneri 2a str. 2457T	1080007
NP_839001.1	CDS	yihT	NC_004741.1	3687923	3688801	D	residues 1 to 292 of 292 are 94.17 pct identical to residues 1 to 292 of 292 from Escherichia coli K-12 : B3881; aldolase	3687923..3688801	Shigella flexneri 2a str. 2457T	1080008
NP_839002.1	CDS	yihS	NC_004741.1	3688818	3690059	D	residues 1 to 413 of 413 are 99.51 pct identical to residues 6 to 418 of 418 from Escherichia coli K-12 : B3880; hypothetical protein	3688818..3690059	Shigella flexneri 2a str. 2457T	1080009
NP_839003.1	CDS	yihR	NC_004741.1	3690197	3691099	D	residues 1 to 300 of 300 are 98.66 pct identical to residues 9 to 308 of 308 from Escherichia coli K-12 : B3879; aldose-1-epimerase	3690197..3691099	Shigella flexneri 2a str. 2457T	1080010
NP_839004.1	CDS	yihQ	NC_004741.1	3691298	3693334	D	residues 1 to 678 of 678 are 97.49 pct identical to residues 1 to 678 of 678 from Escherichia coli K-12 : B3878; alpha-glucosidase	3691298..3693334	Shigella flexneri 2a str. 2457T	1080011
NP_839005.1	CDS	yihO	NC_004741.1	3694797	3696200	D	residues 1 to 462 of 467 are 98.70 pct identical to residues 3 to 464 of 487 from Escherichia coli K-12 : B3876; permease	3694797..3696200	Shigella flexneri 2a str. 2457T	1080013
NP_839006.1	CDS	S3800	NC_004741.1	3696613	3697116	R	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri]; IS1 orfB	complement(3696613..3697116)	Shigella flexneri 2a str. 2457T	1080015
NP_839007.1	CDS	S3801	NC_004741.1	3697035	3697310	R	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(3697035..3697310)	Shigella flexneri 2a str. 2457T	1080016
NP_839008.1	CDS	yihN	NC_004741.1	3697339	3698397	R	residues 1 to 344 of 352 are 95.93 pct identical to residues 1 to 344 of 421 from Escherichia coli K-12 : B3874; resistance protein	complement(3697339..3698397)	Shigella flexneri 2a str. 2457T	1080017
NP_839009.1	CDS	yihM	NC_004741.1	3698499	3699479	R	residues 1 to 326 of 326 are 99.07 pct identical to residues 1 to 326 of 326 from Escherichia coli K-12 : B3873; hypothetical protein	complement(3698499..3699479)	Shigella flexneri 2a str. 2457T	1080018
NP_839010.1	CDS	yihL	NC_004741.1	3699487	3700197	R	residues 1 to 236 of 236 are 100.00 pct identical to residues 1 to 236 of 236 from Escherichia coli K-12 : B3872; transcriptional regulator	complement(3699487..3700197)	Shigella flexneri 2a str. 2457T	1080019
NP_839011.1	CDS	yihK	NC_004741.1	3700414	3702237	R	residues 1 to 591 of 607 are 94.92 pct identical to residues 1 to 591 of 591 from Escherichia coli K-12 : B3871; GTP-binding protein	complement(3700414..3702237)	Shigella flexneri 2a str. 2457T	1080929
NP_839012.1	CDS	glnA	NC_004741.1	3702610	3704019	D	forms a homododecamer; forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate; also functions in the assimilation of ammonia; highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues; addition of adenylyl groups results in inactivation of the enzyme; glutamine synthetase	3702610..3704019	Shigella flexneri 2a str. 2457T	1080021
NP_839013.1	CDS	glnL	NC_004741.1	3704192	3705241	D	sensory histidine kinase in two-component regulatory system with GlnG; acts as a signal transducer which responds to the nitrogen level of cell and modulates the activity of ntrC by phosphorylation/dephosphorylation; nitrogen regulation protein NR(II)	3704192..3705241	Shigella flexneri 2a str. 2457T	1080022
NP_839014.1	CDS	glnG	NC_004741.1	3705253	3706662	D	response regulator of a two-component regulatory system involved in the activation of nitrogen assimilation genes; interacts with sigma-54; nitrogen regulation protein NR(I)	3705253..3706662	Shigella flexneri 2a str. 2457T	1080023
NP_839015.1	CDS	hemN	NC_004741.1	3707113	3708486	R	catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase	complement(3707113..3708486)	Shigella flexneri 2a str. 2457T	1080024
NP_839016.1	CDS	yihI	NC_004741.1	3708675	3709184	R	residues 1 to 169 of 169 are 78.69 pct identical to residues 1 to 169 of 169 from Escherichia coli K-12 : B3866; hypothetical protein	complement(3708675..3709184)	Shigella flexneri 2a str. 2457T	1080025
NP_839017.2	CDS	engB	NC_004741.1	3709766	3710398	D	binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC	3709766..3710398	Shigella flexneri 2a str. 2457T	1080026
NP_839018.1	CDS	polA	NC_004741.1	3710780	3713566	R	has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I	complement(3710780..3713566)	Shigella flexneri 2a str. 2457T	1080028
NP_839019.1	CDS	yihG	NC_004741.1	3713930	3714862	D	residues 1 to 310 of 310 are 91.93 pct identical to residues 1 to 310 of 310 from Escherichia coli K-12 : B3862; acyltransferase	3713930..3714862	Shigella flexneri 2a str. 2457T	1080029
NP_839020.1	CDS	yihF	NC_004741.1	3714903	3716375	R	residues 1 to 490 of 490 are 97.14 pct identical to residues 1 to 490 of 490 from Escherichia coli K-12 : B3861; hypothetical protein	complement(3714903..3716375)	Shigella flexneri 2a str. 2457T	1080030
NP_839021.1	CDS	dsbA	NC_004741.1	3716488	3717114	R	residues 1 to 208 of 208 are 99.51 pct identical to residues 1 to 208 of 208 from Escherichia coli K-12 : B3860; essential for cytochrome c synthesis and formate-dependent reduction; periplasmic protein disulfide isomerase I	complement(3716488..3717114)	Shigella flexneri 2a str. 2457T	1080031
NP_839022.1	CDS	yihE	NC_004741.1	3717131	3718117	R	catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro; specific substrate in vivo has not been identified yet; plays a role in long-term cell survival and expression of surface appendages; serine/threonine protein kinase	complement(3717131..3718117)	Shigella flexneri 2a str. 2457T	1080032
NP_839023.1	CDS	yihD	NC_004741.1	3718194	3718463	R	residues 1 to 89 of 89 are 98.87 pct identical to residues 1 to 89 of 89 from Escherichia coli K-12 : B3858; hypothetical protein	complement(3718194..3718463)	Shigella flexneri 2a str. 2457T	1080033
NP_839024.1	CDS	mobA	NC_004741.1	3718533	3719117	D	Links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis; molybdopterin-guanine dinucleotide biosynthesis protein A	3718533..3719117	Shigella flexneri 2a str. 2457T	1080034
NP_839025.1	CDS	mobB	NC_004741.1	3719099	3719626	D	residues 6 to 175 of 175 are 98.82 pct identical to residues 1 to 170 of 170 from Escherichia coli K-12 : B3856; molybdopterin-guanine dinucleotide biosynthesis protein B	3719099..3719626	Shigella flexneri 2a str. 2457T	1080035
NP_839026.1	CDS	hemG	NC_004741.1	3725208	3725753	R	catalyzes the oxidation of protoporphyrinogen IX to form protoporphyrin IX; protoporphyrinogen oxidase	complement(3725208..3725753)	Shigella flexneri 2a str. 2457T	1080042
NP_839027.1	CDS	trkH	NC_004741.1	3725765	3727216	R	residues 1 to 417 of 483 are 93.28 pct identical to residues 1 to 417 of 432 from Escherichia coli K-12 : B3849; requires trkE; potassium transporter	complement(3725765..3727216)	Shigella flexneri 2a str. 2457T	1080043
NP_839028.1	CDS	yigZ	NC_004741.1	3727255	3727869	R	residues 1 to 204 of 204 are 94.60 pct identical to residues 2 to 205 of 205 from Escherichia coli K-12 : B3848; hypothetical protein	complement(3727255..3727869)	Shigella flexneri 2a str. 2457T	1080044
NP_839029.1	CDS	pepQ	NC_004741.1	3727869	3729200	R	catalyzes the hydrolysis of dipeptides with a proline at the C-terminal; also catalyzes the low efficiency hydrolysis of organophosphate di- and tri-esters; proline dipeptidase	complement(3727869..3729200)	Shigella flexneri 2a str. 2457T	1080045
NP_839030.1	CDS	fadB	NC_004741.1	3729390	3731579	D	includes enoyl-CoA hydratase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, 3-hydroxyacyl-CoA dehydrogenase, and 3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities; forms a heterotetramer with FadA; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids; multifunctional fatty acid oxidation complex subunit alpha	3729390..3731579	Shigella flexneri 2a str. 2457T	1080046
NP_839031.1	CDS	fadA	NC_004741.1	3731589	3732752	D	FadA; fatty acid oxidation complex component beta; functions in a heterotetramer with FadB; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids; 3-ketoacyl-CoA thiolase	3731589..3732752	Shigella flexneri 2a str. 2457T	1080047
NP_839032.1	CDS	fre	NC_004741.1	3732944	3733645	R	NAD(P)H-flavin reductase; catalyzes the reversible oxidation/reduction of NAD(P) and flavine mononucleotide; in Salmonella and E. coli this protein also reduces aquacob(III)alamin to cob(II)alamin; FMN reductase	complement(3732944..3733645)	Shigella flexneri 2a str. 2457T	1080048
NP_839033.1	CDS	yigC	NC_004741.1	3733691	3735184	R	catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase	complement(3733691..3735184)	Shigella flexneri 2a str. 2457T	1080049
NP_839034.1	CDS	rfaH	NC_004741.1	3735351	3735839	D	residues 1 to 162 of 162 are 98.76 pct identical to residues 1 to 162 of 162 from Escherichia coli K-12 : B3842; affects biosynthesis of lipopolysaccharide core, F pilin, and hemolysin; transcriptional activator RfaH	3735351..3735839	Shigella flexneri 2a str. 2457T	1080050
NP_839035.1	CDS	yigW	NC_004741.1	3735836	3736618	R	magnesium dependent; not involved in the Sec-independent protein export system; DNase TatD	complement(3735836..3736618)	Shigella flexneri 2a str. 2457T	1080051
NP_839036.1	CDS	yigU	NC_004741.1	3736660	3737436	R	with TatABE forms the twin-arginine translocation complex which is involved in the transport of proteins across the cytoplasmic membrane; twin-arginine protein translocation system subunit TatC	complement(3736660..3737436)	Shigella flexneri 2a str. 2457T	1080052
NP_839037.1	CDS	S3838	NC_004741.1	3737439	3737954	R	mediates the export of protein precursors bearing twin-arginine signal peptides; sec-independent translocase	complement(3737439..3737954)	Shigella flexneri 2a str. 2457T	1080053
NP_839038.1	CDS	tatA	NC_004741.1	3737958	3738269	R	TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin arginine translocase A	complement(3737958..3738269)	Shigella flexneri 2a str. 2457T	1080055
NP_839039.1	CDS	ubiB	NC_004741.1	3738306	3739946	R	an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone; functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis; similar to eukaryotic proteins that exhibit kinase functions; ubiquinone biosynthesis protein UbiB	complement(3738306..3739946)	Shigella flexneri 2a str. 2457T	1080056
NP_839040.1	CDS	yigP	NC_004741.1	3739943	3740548	R	residues 1 to 201 of 201 are 100.00 pct identical to residues 1 to 201 of 201 from Escherichia coli K-12 : B3834; hypothetical protein	complement(3739943..3740548)	Shigella flexneri 2a str. 2457T	1080057
NP_839041.1	CDS	ubiE	NC_004741.1	3740562	3741317	R	Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase	complement(3740562..3741317)	Shigella flexneri 2a str. 2457T	1080058
NP_839042.1	CDS	yigN	NC_004741.1	3741412	3742824	R	YigN; nuclease that may cleave DNA structures arising during the recombination of short-inverted repeats and thereby prevents the inversion of the internal sequence; transcription is induced by DNA-damaging agents such as nalidixic acid or mitomycin C in a LexA-dependent manner; DNA recombination protein RmuC	complement(3741412..3742824)	Shigella flexneri 2a str. 2457T	1080059
NP_839043.1	CDS	udp	NC_004741.1	3742980	3743741	R	catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate; involved in the pyrimidine salvage pathway; uridine phosphorylase	complement(3742980..3743741)	Shigella flexneri 2a str. 2457T	1080060
NP_839044.1	CDS	S3847	NC_004741.1	3744111	3744419	R	no significant similarities; hypothetical protein	complement(3744111..3744419)	Shigella flexneri 2a str. 2457T	1080062
NP_839045.1	CDS	metE	NC_004741.1	3744856	3747117	R	catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase	complement(3744856..3747117)	Shigella flexneri 2a str. 2457T	1080063
NP_839046.1	CDS	metR	NC_004741.1	3747353	3748306	D	residues 1 to 317 of 317 are 94.95 pct identical to residues 1 to 317 of 317 from Escherichia coli K-12 : B3828; regulator for metE and metH	3747353..3748306	Shigella flexneri 2a str. 2457T	1080064
NP_839047.1	CDS	yigM	NC_004741.1	3748194	3749093	R	residues 1 to 299 of 299 are 94.64 pct identical to residues 1 to 299 of 299 from Escherichia coli K-12 : B3827; hypothetical protein	complement(3748194..3749093)	Shigella flexneri 2a str. 2457T	1080065
NP_839048.1	CDS	yigL	NC_004741.1	3749169	3749969	R	purine and pyrimidine nucleotides are secondary substrates; yigL expression is regulated by heat shock, osmotic shock and starvation of glucose, phosphate or ammonium; sugar phosphatase	complement(3749169..3749969)	Shigella flexneri 2a str. 2457T	1080066
NP_839049.1	CDS	pldB	NC_004741.1	3749977	3750999	R	lecithinase B; catalyzes the conversion of 1-lysophosphatidylcholine to glycerophosphocholine; can also hydrolyze 2-acyl glycerophosphoethanolamine and other substrates; lysophospholipase L2	complement(3749977..3750999)	Shigella flexneri 2a str. 2457T	1080067
NP_839050.1	CDS	yigK	NC_004741.1	3751314	3751730	D	residues 1 to 138 of 138 are 87.68 pct identical to residues 1 to 138 of 138 from Escherichia coli K-12 : B3824; hypothetical protein	3751314..3751730	Shigella flexneri 2a str. 2457T	1080068
NP_839051.1	CDS	yigJ	NC_004741.1	3751792	3752160	R	residues 1 to 122 of 122 are 90.16 pct identical to residues 1 to 122 of 122 from Escherichia coli K-12 : B3823; hypothetical protein	complement(3751792..3752160)	Shigella flexneri 2a str. 2457T	1080069
NP_839052.1	CDS	recQ	NC_004741.1	3752476	3754311	R	functions in blocking illegitimate recombination, enhancing topoisomerase activity, initiating SOS signaling and clearing blocked replication forks; component of the RecF recombinational pathway; ATP-dependent DNA helicase RecQ	complement(3752476..3754311)	Shigella flexneri 2a str. 2457T	1080071
NP_839053.1	CDS	pldA	NC_004741.1	3754438	3755307	R	catalyzes the hydrolysis of phosphatidylcholine; phospholipase A	complement(3754438..3755307)	Shigella flexneri 2a str. 2457T	1080073
NP_839054.2	CDS	yigI	NC_004741.1	3755472	3755939	D	residues 1 to 161 of 161 are 100.00 pct identical to residues 1 to 161 of 161 from Escherichia coli K-12 : B3820; hypothetical protein	3755472..3755939	Shigella flexneri 2a str. 2457T	1080074
NP_839055.1	CDS	rarD	NC_004741.1	3755991	3756881	D	residues 4 to 296 of 296 are 92.49 pct identical to residues 8 to 300 of 300 from Escherichia coli K-12 : B3819; hypothetical protein	3755991..3756881	Shigella flexneri 2a str. 2457T	1080076
NP_839056.1	CDS	yigG	NC_004741.1	3756940	3757356	D	residues 1 to 138 of 138 are 82.60 pct identical to residues 1 to 138 of 138 from Escherichia coli K-12 : B3818; hypothetical protein	3756940..3757356	Shigella flexneri 2a str. 2457T	1080079
NP_839057.1	CDS	yigF	NC_004741.1	3757370	3757750	D	residues 1 to 126 of 126 are 99.20 pct identical to residues 1 to 126 of 126 from Escherichia coli K-12 : B3817; hypothetical protein	3757370..3757750	Shigella flexneri 2a str. 2457T	1080080
NP_839058.1	CDS	corA	NC_004741.1	3757791	3758741	R	responsible for the influx of magnesium ions; magnesium/nickel/cobalt transporter CorA	complement(3757791..3758741)	Shigella flexneri 2a str. 2457T	1078848
NP_839059.1	CDS	yigE	NC_004741.1	3759111	3759449	D	residues 1 to 112 of 112 are 98.21 pct identical to residues 1 to 112 of 161 from Escherichia coli K-12 : B3815; hypothetical protein	3759111..3759449	Shigella flexneri 2a str. 2457T	1076670
NP_839060.1	CDS	S3863	NC_004741.1	3759460	3760788	R	residues 1 to 442 of 442 are 99.77 pct identical to residues 7 to 448 of 448 from GenPept : >gb|AAK18333.1|AF348706_22 (AF348706) IS4 orf [Shigella flexneri]; IS4 orf	complement(3759460..3760788)	Shigella flexneri 2a str. 2457T	1080082
NP_839061.1	CDS	S3864	NC_004741.1	3761014	3761313	D	residues 1 to 99 of 99 are 97.97 pct identical to residues 1 to 99 of 99 from Escherichia coli K-12 : B3814; hypothetical protein	3761014..3761313	Shigella flexneri 2a str. 2457T	1080083
NP_839062.1	CDS	uvrD	NC_004741.1	3761460	3763622	R	unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present; involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair.; DNA-dependent helicase II	complement(3761460..3763622)	Shigella flexneri 2a str. 2457T	1076646
NP_839063.1	CDS	yigB	NC_004741.1	3763706	3764422	R	YigB; member of the haloacid dehalogenase (HAD)-like hydrolases superfamily of protein; unknown function; flavin mononucleotide phosphatase	complement(3763706..3764422)	Shigella flexneri 2a str. 2457T	1080084
NP_839064.1	CDS	xerC	NC_004741.1	3764422	3765318	R	site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC	complement(3764422..3765318)	Shigella flexneri 2a str. 2457T	1080085
NP_839065.1	CDS	yigA	NC_004741.1	3765315	3766022	R	residues 1 to 235 of 235 are 95.74 pct identical to residues 1 to 235 of 235 from Escherichia coli K-12 : B3810; hypothetical protein	complement(3765315..3766022)	Shigella flexneri 2a str. 2457T	1080086
NP_839066.2	CDS	dapF	NC_004741.1	3766019	3766843	R	involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase	complement(3766019..3766843)	Shigella flexneri 2a str. 2457T	1080088
NP_839067.1	CDS	yifL	NC_004741.1	3766880	3767083	R	residues 1 to 67 of 67 are 100.00 pct identical to residues 1 to 67 of 67 from GenPept : >gb|AAG59001.1|AE005612_4 (AE005612) Z5325 gene product [Escherichia coli O157:H7 EDL933]; outer membrane lipoprotein	complement(3766880..3767083)	Shigella flexneri 2a str. 2457T	1080089
NP_839068.1	CDS	S3871	NC_004741.1	3767386	3768423	D	residues 1 to 342 of 345 are 69.59 pct identical to residues 39 to 380 of 669 from GenPept : >emb|CAD09375.1| (AL627279) possible exported protein [Salmonella enterica subsp. enterica serovar Typhi]; hypothetical protein	3767386..3768423	Shigella flexneri 2a str. 2457T	1080090
NP_839069.1	CDS	S3874	NC_004741.1	3769659	3770162	R	residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAL72450.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS1 orfB	complement(3769659..3770162)	Shigella flexneri 2a str. 2457T	1080092
NP_839070.1	CDS	S3875	NC_004741.1	3770081	3770356	R	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(3770081..3770356)	Shigella flexneri 2a str. 2457T	1080093
NP_839071.1	CDS	cyaY	NC_004741.1	3770885	3771205	D	defects in the mitochondrial frataxin protein cause Friedreich ataxis which is an autosomal recessive neurodegenerative disease; based on phylogenomic distribution this protein may have a role in iron-sulfur cluster protein assembly; frataxin-like protein	3770885..3771205	Shigella flexneri 2a str. 2457T	1080095
NP_839072.1	CDS	cyaA	NC_004741.1	3771245	3773791	R	catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP; adenylate cyclase	complement(3771245..3773791)	Shigella flexneri 2a str. 2457T	1080096
NP_839073.1	CDS	hemC	NC_004741.1	3774178	3775119	D	transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase	3774178..3775119	Shigella flexneri 2a str. 2457T	1080097
NP_839074.1	CDS	hemD	NC_004741.1	3775116	3775856	D	catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; functions in tetrapyrrole and heme biosynthesis; uroporphyrinogen-III synthase	3775116..3775856	Shigella flexneri 2a str. 2457T	1080098
NP_839075.1	CDS	hemX	NC_004741.1	3775878	3777077	D	residues 1 to 367 of 399 are 88.01 pct identical to residues 1 to 367 of 393 from Escherichia coli K-12 : B3803; uroporphyrinogen III C-methyltransferase	3775878..3777077	Shigella flexneri 2a str. 2457T	1080099
NP_839076.1	CDS	hemY	NC_004741.1	3777080	3778276	D	residues 19 to 398 of 398 are 92.63 pct identical to residues 19 to 398 of 398 from Escherichia coli K-12 : B3802; involved in late step of protohemeiX synthesis; protoheme IX biogenesis protein	3777080..3778276	Shigella flexneri 2a str. 2457T	1080100
NP_839077.2	CDS	S3883	NC_004741.1	3779138	3779503	D	IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats; insertion sequence 2 OrfA protein	3779138..3779503	Shigella flexneri 2a str. 2457T	1080101
NP_839078.2	CDS	S3884	NC_004741.1	3779461	3780366	D	IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats; insertion element IS2 transposase InsD	3779461..3780366	Shigella flexneri 2a str. 2457T	1080102
NP_839079.1	CDS	aslB	NC_004741.1	3780536	3781771	R	residues 1 to 411 of 411 are 96.10 pct identical to residues 1 to 411 of 411 from Escherichia coli K-12 : B3800; arylsulfatase regulator	complement(3780536..3781771)	Shigella flexneri 2a str. 2457T	1080103
NP_839080.1	CDS	yifK	NC_004741.1	3782457	3783842	R	uncharacterized member of the amino acid-polyamine-organocation (APC) superfamily of amino acid transporters; unknown function; transporter	complement(3782457..3783842)	Shigella flexneri 2a str. 2457T	1080109
NP_839081.1	CDS	wecG	NC_004741.1	3784033	3784773	R	residues 1 to 246 of 246 are 99.18 pct identical to residues 1 to 246 of 246 from Escherichia coli K-12 : B3794; required for synthesis of enterobacterial common antigen (ECA); UDP-N-acetyl-D-mannosaminuronic acid transferase	complement(3784033..3784773)	Shigella flexneri 2a str. 2457T	1080110
NP_839082.1	CDS	wecF	NC_004741.1	3784776	3786128	R	enterobacterial common antigen polymerase; common antigen polymerase	complement(3784776..3786128)	Shigella flexneri 2a str. 2457T	1080111
NP_839083.1	CDS	yifM	NC_004741.1	3786125	3787204	R	catalyzes the synthesis of a lipid-linked intermediate involved in ECA synthesis; 4-alpha-L-fucosyltransferase	complement(3786125..3787204)	Shigella flexneri 2a str. 2457T	1080112
NP_839084.1	CDS	wzxE	NC_004741.1	3787201	3788451	R	residues 1 to 416 of 416 are 91.34 pct identical to residues 1 to 416 of 416 from Escherichia coli K-12 : B3792; cytochrome	complement(3787201..3788451)	Shigella flexneri 2a str. 2457T	1080113
NP_839085.1	CDS	wecE	NC_004741.1	3788453	3789583	R	catalyzes the formation of dTDP-D-fucosamine from dTDP-4-oxo-6-deoxy-D-glucose in enterobacterial common antigen biosynthesis; TDP-4-oxo-6-deoxy-D-glucose transaminase	complement(3788453..3789583)	Shigella flexneri 2a str. 2457T	1080114
NP_839086.1	CDS	wecD	NC_004741.1	3789588	3790133	R	residues 1 to 181 of 181 are 81.76 pct identical to residues 1 to 181 of 181 from Escherichia coli K-12 : B3790; TDP-fucosamine acetyltransferase	complement(3789588..3790133)	Shigella flexneri 2a str. 2457T	1080115
NP_839087.1	CDS	rffH	NC_004741.1	3790240	3791121	R	residues 1 to 293 of 293 are 100.00 pct identical to residues 1 to 293 of 293 from Escherichia coli K-12 : B3789; glucose-1-phosphate thymidylyltransferase	complement(3790240..3791121)	Shigella flexneri 2a str. 2457T	1080116
NP_839088.1	CDS	rffG	NC_004741.1	3791140	3792207	R	residues 1 to 355 of 355 are 94.08 pct identical to residues 1 to 355 of 355 from Escherichia coli K-12 : B3788; dTDP-glucose 4,6-dehydratase	complement(3791140..3792207)	Shigella flexneri 2a str. 2457T	1080117
NP_839089.1	CDS	wecC	NC_004741.1	3792207	3793469	R	catalyzes the oxidation of UDP-N-acetyl-D-mannosamine to UDP-N-acetylmannosaminuronic acid; UDP-N-acetyl-D-mannosamine dehydrogenase	complement(3792207..3793469)	Shigella flexneri 2a str. 2457T	1080118
NP_839090.1	CDS	wecB	NC_004741.1	3793466	3794638	R	residues 1 to 390 of 390 are 96.15 pct identical to residues 1 to 389 of 389 from Escherichia coli K-12 : B3786; required for synthesis of enterobacterial common antigen (ECA); UDP-N-acetyl glucosamine-2-epimerase	complement(3793466..3794638)	Shigella flexneri 2a str. 2457T	1080119
NP_839091.1	CDS	wzzE	NC_004741.1	3794652	3795698	R	Enterobacterial Common Antigen (ECA) polysaccharide chain length modulation protein; lipopolysaccharide biosynthesis protein WzzE	complement(3794652..3795698)	Shigella flexneri 2a str. 2457T	1080120
NP_839092.1	CDS	rfe	NC_004741.1	3795710	3796813	R	residues 1 to 367 of 367 are 88.82 pct identical to residues 1 to 367 of 367 from Escherichia coli K-12 : B3784; required for synthesis of enterobacterial common antigen (ECA); UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase	complement(3795710..3796813)	Shigella flexneri 2a str. 2457T	1080962
NP_839093.1	CDS	rho	NC_004741.1	3797053	3798312	R	An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho	complement(3797053..3798312)	Shigella flexneri 2a str. 2457T	1076538
NP_839094.1	CDS	rhoL	NC_004741.1	3798397	3798498	R	residues 1 to 33 of 33 are 100.00 pct identical to residues 1 to 33 of 33 from Escherichia coli K-12 : B3782; rho operon leader peptide	complement(3798397..3798498)	Shigella flexneri 2a str. 2457T	1080121
NP_839095.1	CDS	trxA	NC_004741.1	3798639	3799022	R	residues 1 to 127 of 127 are 100.00 pct identical to residues 1 to 127 of 127 from Escherichia coli K-12 : B3781; thioredoxin	complement(3798639..3799022)	Shigella flexneri 2a str. 2457T	1080923
NP_839096.1	CDS	rhlB	NC_004741.1	3799099	3800364	D	enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation; ATP-dependent RNA helicase RhlB	3799099..3800364	Shigella flexneri 2a str. 2457T	1080968
NP_839097.1	CDS	gppA	NC_004741.1	3800498	3801982	D	catalyzes the conversion of guanosine 5'-triphosphate,3'-diphosphate (pppGpp) to guanosine 5'-diphosphate,3'-diphosphate (ppGpp); pppGpp and ppGpp control the stringent response during amino acid starvation; guanosine pentaphosphate phosphohydrolase	3800498..3801982	Shigella flexneri 2a str. 2457T	1080122
NP_839098.1	CDS	rep	NC_004741.1	3802029	3804050	R	single-stranded DNA-dependent ATPase; initiates unwinding at a nick in the DNA; involved in DNA replication; ATP-dependent DNA helicase Rep	complement(3802029..3804050)	Shigella flexneri 2a str. 2457T	1080106
NP_839099.1	CDS	ppiC	NC_004741.1	3804137	3804418	D	residues 1 to 93 of 93 are 98.92 pct identical to residues 1 to 93 of 93 from Escherichia coli K-12 : B3775; peptidyl-prolyl cis-trans isomerase C (rotamase C)	3804137..3804418	Shigella flexneri 2a str. 2457T	1080123
NP_839100.1	CDS	ilvC	NC_004741.1	3804464	3805939	R	catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase	complement(3804464..3805939)	Shigella flexneri 2a str. 2457T	1080124
NP_839101.1	CDS	ilvY	NC_004741.1	3806089	3806979	D	participates in controlling several genes involved in isoleucine and valine biosynthesis; activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate; DNA-binding transcriptional regulator IlvY	3806089..3806979	Shigella flexneri 2a str. 2457T	1080125
NP_839102.1	CDS	ilvA	NC_004741.1	3806976	3808520	R	threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway; threonine dehydratase	complement(3806976..3808520)	Shigella flexneri 2a str. 2457T	1080126
NP_839103.1	CDS	ilvD	NC_004741.1	3808523	3810373	R	catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase	complement(3808523..3810373)	Shigella flexneri 2a str. 2457T	1080127
NP_839104.1	CDS	ilvE	NC_004741.1	3810438	3811367	R	catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase	complement(3810438..3811367)	Shigella flexneri 2a str. 2457T	1080128
NP_839105.1	CDS	ilvM	NC_004741.1	3811387	3811647	R	residues 1 to 86 of 86 are 100.00 pct identical to residues 2 to 87 of 87 from Escherichia coli K-12 : B3769; valine insensitive; acetolactate synthase 2 regulatory subunit	complement(3811387..3811647)	Shigella flexneri 2a str. 2457T	1080129
NP_839106.1	CDS	ilvG	NC_004741.1	3811647	3813293	R	catalyzes the formation of 2-acetolactate from pyruvate; also known as acetolactate synthase large subunit; acetolactate synthase 2 catalytic subunit	complement(3811647..3813293)	Shigella flexneri 2a str. 2457T	1080130
NP_839107.1	CDS	ilvL	NC_004741.1	3813432	3813530	R	residues 1 to 32 of 32 are 56.25 pct identical to residues 1 to 32 of 32 from Escherichia coli K-12 : B3766; ilvG operon leader peptide	complement(3813432..3813530)	Shigella flexneri 2a str. 2457T	1080131
NP_839108.1	CDS	yifE	NC_004741.1	3815386	3815724	R	residues 1 to 112 of 112 are 100.00 pct identical to residues 1 to 112 of 112 from Escherichia coli K-12 : B3764; hypothetical protein	complement(3815386..3815724)	Shigella flexneri 2a str. 2457T	1080133
NP_839109.1	CDS	yifA	NC_004741.1	3815843	3816682	D	Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon; transcriptional regulator HdfR	3815843..3816682	Shigella flexneri 2a str. 2457T	1080134
NP_839110.1	CDS	yieP	NC_004741.1	3822630	3823178	D	residues 1 to 182 of 182 are 98.90 pct identical to residues 1 to 181 of 181 from Escherichia coli K-12 : B3755; hypothetical protein	3822630..3823178	Shigella flexneri 2a str. 2457T	1080142
NP_839111.1	CDS	yieO	NC_004741.1	3823225	3824628	D	residues 1 to 467 of 467 are 92.07 pct identical to residues 9 to 475 of 475 from Escherichia coli K-12 : B3754; transporter	3823225..3824628	Shigella flexneri 2a str. 2457T	1080144
NP_839112.1	CDS	rbsR	NC_004741.1	3824594	3825577	R	DNA-binding transcriptional repressor of ribose metabolism; transcriptional repressor RbsR	complement(3824594..3825577)	Shigella flexneri 2a str. 2457T	1080145
NP_839113.1	CDS	rbsK	NC_004741.1	3825590	3826534	R	catalyzes the formation of D-ribose 5-phosphate from ribose; ribokinase	complement(3825590..3826534)	Shigella flexneri 2a str. 2457T	1080146
NP_839114.1	CDS	rbsC	NC_004741.1	3827560	3828525	R	functions to transport ribose at high affinity; forms a complex with RbsA2C2B; ribose ABC transporter permease	complement(3827560..3828525)	Shigella flexneri 2a str. 2457T	1080148
NP_839115.1	CDS	S3936	NC_004741.1	3829707	3830210	R	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri]; IS1 orfB	complement(3829707..3830210)	Shigella flexneri 2a str. 2457T	1080149
NP_839116.1	CDS	S3937	NC_004741.1	3830129	3830404	R	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(3830129..3830404)	Shigella flexneri 2a str. 2457T	1080150
NP_839117.1	CDS	rbsD	NC_004741.1	3830819	3831238	R	cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose; RbsD is required for efficient ribose utilization in E. coli; rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source; D-ribose pyranase	complement(3830819..3831238)	Shigella flexneri 2a str. 2457T	1080152
NP_839118.1	CDS	trkD	NC_004741.1	3831405	3833273	R	Responsible for the low-affinity transport of potassium into the cell; involved in potassium ion uptake under hyper-osmotic stress at a low pH; potassium transport protein Kup	complement(3831405..3833273)	Shigella flexneri 2a str. 2457T	1080153
NP_839119.1	CDS	S3941	NC_004741.1	3833431	3834759	R	residues 1 to 442 of 442 are 100.00 pct identical to residues 7 to 448 of 448 from GenPept : >gb|AAK18333.1|AF348706_22 (AF348706) IS4 orf [Shigella flexneri]; IS4 orf	complement(3833431..3834759)	Shigella flexneri 2a str. 2457T	1080154
NP_839120.2	CDS	yieN	NC_004741.1	3834933	3836429	D	interacts with LdcI, lysine decarboxylase; may be active in late log/ early stationary phase; regulatory ATPase RavA	3834933..3836429	Shigella flexneri 2a str. 2457T	1080155
NP_839121.2	CDS	yieM	NC_004741.1	3836423	3837874	D	contains a von Willibrand factor type A domain; stimulates the ATPase activity of RavA; hypothetical protein	3836423..3837874	Shigella flexneri 2a str. 2457T	1080156
NP_839122.1	CDS	asnA	NC_004741.1	3837879	3838871	R	catalyzes the formation of asparagine from aspartate and ammonia; asparagine synthetase AsnA	complement(3837879..3838871)	Shigella flexneri 2a str. 2457T	1080157
NP_839123.1	CDS	asnC	NC_004741.1	3839023	3839481	D	transcriptional repressor of asnA which codes for aspartate-ammonia ligase; DNA-binding transcriptional regulator AsnC	3839023..3839481	Shigella flexneri 2a str. 2457T	1080158
NP_839124.1	CDS	mioC	NC_004741.1	3839571	3840014	D	An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin	3839571..3840014	Shigella flexneri 2a str. 2457T	1080159
NP_839125.1	CDS	gidA	NC_004741.1	3840393	3842282	D	GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	3840393..3842282	Shigella flexneri 2a str. 2457T	1080161
NP_839126.1	CDS	gidB	NC_004741.1	3842346	3842969	D	glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB	3842346..3842969	Shigella flexneri 2a str. 2457T	1080162
NP_839127.2	CDS	atpI	NC_004741.1	3843586	3843966	D	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit I associates with the membrane and may be involved with cation translocation; F0F1 ATP synthase subunit I	3843586..3843966	Shigella flexneri 2a str. 2457T	1080163
NP_839128.1	CDS	atpB	NC_004741.1	3843975	3844790	D	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A	3843975..3844790	Shigella flexneri 2a str. 2457T	1080164
NP_839129.1	CDS	atpE	NC_004741.1	3844837	3845076	D	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C	3844837..3845076	Shigella flexneri 2a str. 2457T	1080165
NP_839130.1	CDS	atpF	NC_004741.1	3845138	3845608	D	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B	3845138..3845608	Shigella flexneri 2a str. 2457T	1080166
NP_839131.1	CDS	atpH	NC_004741.1	3845623	3846156	D	Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta	3845623..3846156	Shigella flexneri 2a str. 2457T	1080167
NP_839132.1	CDS	atpA	NC_004741.1	3846169	3847710	D	produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha	3846169..3847710	Shigella flexneri 2a str. 2457T	1080168
NP_839133.1	CDS	atpG	NC_004741.1	3847761	3848624	D	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma	3847761..3848624	Shigella flexneri 2a str. 2457T	1080169
NP_839134.1	CDS	atpD	NC_004741.1	3848651	3850033	D	Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta	3848651..3850033	Shigella flexneri 2a str. 2457T	1080170
NP_839135.1	CDS	atpC	NC_004741.1	3850060	3850473	D	part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon	3850060..3850473	Shigella flexneri 2a str. 2457T	1080171
NP_839136.1	CDS	glmU	NC_004741.1	3850824	3852194	D	forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase	3850824..3852194	Shigella flexneri 2a str. 2457T	1080172
NP_839137.1	CDS	glmS	NC_004741.1	3852356	3854185	D	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase	3852356..3854185	Shigella flexneri 2a str. 2457T	1080173
NP_839138.1	CDS	S3960	NC_004741.1	3854306	3855634	D	residues 1 to 442 of 442 are 99.32 pct identical to residues 7 to 448 of 448 from GenPept : >gb|AAK18333.1|AF348706_22 (AF348706) IS4 orf [Shigella flexneri]; IS4 orf	3854306..3855634	Shigella flexneri 2a str. 2457T	1080174
NP_839139.1	CDS	lpfA	NC_004741.1	3855926	3856498	D	residues 1 to 190 of 190 are 92.10 pct identical to residues 1 to 190 of 190 from GenPept : >gb|AAL18161.1| (AY057066) LpfA [Escherichia coli]; major fimbrial subunit	3855926..3856498	Shigella flexneri 2a str. 2457T	1080175
NP_839140.2	CDS	S3963	NC_004741.1	3857264	3858169	R	IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats; insertion element IS2 transposase InsD	complement(3857264..3858169)	Shigella flexneri 2a str. 2457T	1080176
NP_839141.2	CDS	S3964	NC_004741.1	3858127	3858492	R	IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats; insertion sequence 2 OrfA protein	complement(3858127..3858492)	Shigella flexneri 2a str. 2457T	1080177
NP_839142.1	CDS	S3965	NC_004741.1	3860121	3860627	D	residues 1 to 168 of 168 are 99.40 pct identical to residues 747 to 914 of 1295 from GenPept : >gb|AAG30168.1|AF289092_1 (AF289092) secreted autotransporter toxin [Escherichia coli]; partial; secreted autotransporter toxin	3860121..3860627	Shigella flexneri 2a str. 2457T	1080178
NP_839143.1	CDS	S3966	NC_004741.1	3860668	3861381	R	residues 1 to 237 of 237 are 91.13 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAK18576.1|AF348706_265 (AF348706) IS600 orfB [Shigella flexneri]; IS600 orfB	complement(3860668..3861381)	Shigella flexneri 2a str. 2457T	1080179
NP_839144.1	CDS	S3967	NC_004741.1	3861522	3861824	R	residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAF09029.1| (AF139596) unknown [Shigella flexneri]; IS600 orfA	complement(3861522..3861824)	Shigella flexneri 2a str. 2457T	1080959
NP_839145.1	CDS	S3968	NC_004741.1	3862079	3862372	D	residues 1 to 97 of 97 are 87.62 pct identical to residues 24 to 120 of 120 from GenPept : >gb|AAG58857.1|AE005598_1 (AE005598) Z5148 gene product [Escherichia coli O157:H7 EDL933]; transporter	3862079..3862372	Shigella flexneri 2a str. 2457T	1080957
NP_839146.2	CDS	nepI	NC_004741.1	3862413	3863603	R	experimental results in Escherichia coli suggest that this gene encodes an inosine export protein; member of major facilitator superfamily; MFS; ribonucleoside transporter	complement(3862413..3863603)	Shigella flexneri 2a str. 2457T	1080180
NP_839147.1	CDS	yicN	NC_004741.1	3863814	3864293	R	residues 1 to 159 of 159 are 98.74 pct identical to residues 1 to 159 of 159 from Escherichia coli K-12 : B3663; hypothetical protein	complement(3863814..3864293)	Shigella flexneri 2a str. 2457T	1080181
NP_839148.1	CDS	yicO	NC_004741.1	3864319	3865731	R	residues 1 to 450 of 470 are 96.44 pct identical to residues 1 to 450 of 470 from Escherichia coli K-12 : B3664; hypothetical protein	complement(3864319..3865731)	Shigella flexneri 2a str. 2457T	1080183
NP_839149.1	CDS	yicP	NC_004741.1	3865828	3867594	D	catalyzes the formation of hypoxanthine from adenine; in E. coli this activity has been detected in mutant strains but not in wild type; cryptic adenine deaminase	3865828..3867594	Shigella flexneri 2a str. 2457T	1080184
NP_839150.1	CDS	uhpT	NC_004741.1	3867640	3869031	R	cytoplasmic membrane protein that functions as a monomer; catalyzes the active transport of sugar-phosphates such as glucose-6-phosphate with the obligatory exchange of inorganic phosphate or organophosphate; sugar phosphate antiporter	complement(3867640..3869031)	Shigella flexneri 2a str. 2457T	1080185
NP_839151.1	CDS	uhpC	NC_004741.1	3869169	3870488	R	membrane protein regulates uhpT expression; regulatory protein UhpC	complement(3869169..3870488)	Shigella flexneri 2a str. 2457T	1080186
NP_839152.1	CDS	uhpB	NC_004741.1	3870498	3872000	R	Member of the two-component regulatory system UhpB/UhpA involved in the regulation of the uptake of hexose ph; sensory histidine kinase UhpB	complement(3870498..3872000)	Shigella flexneri 2a str. 2457T	1080187
NP_839153.1	CDS	uhpA	NC_004741.1	3872000	3872590	R	response regulator in two-component regulatory system wtih UhpB; phosphorylated UhpA is a positive activator uhpT, a hexose phosphates transporter; DNA-binding transcriptional activator UhpA	complement(3872000..3872590)	Shigella flexneri 2a str. 2457T	1080188
NP_839154.1	CDS	ilvN	NC_004741.1	3872665	3872955	R	with IlvB catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase small subunit; acetolactate synthase 1 regulatory subunit	complement(3872665..3872955)	Shigella flexneri 2a str. 2457T	1080190
NP_839155.1	CDS	ilvB	NC_004741.1	3872959	3874647	R	catalyzes the formation of 2-acetolactate from pyruvate; acetolactate synthase catalytic subunit	complement(3872959..3874647)	Shigella flexneri 2a str. 2457T	1080191
NP_839156.1	CDS	ivbL	NC_004741.1	3874753	3874851	R	residues 1 to 32 of 32 are 65.62 pct identical to residues 1 to 32 of 32 from Escherichia coli K-12 : B3672; ilvB operon leader peptide	complement(3874753..3874851)	Shigella flexneri 2a str. 2457T	1080192
NP_839157.1	CDS	emrD	NC_004741.1	3875818	3876969	D	multidrug efflux protein involved in adaptation to low energy shock; multidrug resistance protein D	3875818..3876969	Shigella flexneri 2a str. 2457T	1080193
NP_839158.1	CDS	yidF	NC_004741.1	3876977	3877474	R	residues 1 to 165 of 165 are 99.39 pct identical to residues 1 to 165 of 165 from Escherichia coli K-12 : B3674; transcriptional regulator	complement(3876977..3877474)	Shigella flexneri 2a str. 2457T	1080194
NP_839159.1	CDS	yidG	NC_004741.1	3877471	3877833	R	residues 1 to 120 of 120 are 86.66 pct identical to residues 1 to 120 of 120 from Escherichia coli K-12 : B3675; hypothetical protein	complement(3877471..3877833)	Shigella flexneri 2a str. 2457T	1080195
NP_839160.1	CDS	yidH	NC_004741.1	3877823	3878170	R	residues 1 to 91 of 115 are 84.61 pct identical to residues 1 to 91 of 115 from Escherichia coli K-12 : B3676; hypothetical protein	complement(3877823..3878170)	Shigella flexneri 2a str. 2457T	1080196
NP_839161.1	CDS	yidI	NC_004741.1	3878279	3878692	D	residues 1 to 137 of 137 are 70.46 pct identical to residues 1 to 149 of 149 from Escherichia coli K-12 : B3677; hypothetical protein	3878279..3878692	Shigella flexneri 2a str. 2457T	1080197
NP_839162.1	CDS	yidK	NC_004741.1	3880216	3881931	R	uncharacterized member of the SSS superfamily of sodium-dependent solute transporters; unknown function; symporter YidK	complement(3880216..3881931)	Shigella flexneri 2a str. 2457T	1080199
NP_839163.1	CDS	yidL	NC_004741.1	3882098	3882991	D	residues 1 to 297 of 297 are 90.23 pct identical to residues 11 to 307 of 307 from Escherichia coli K-12 : B3680; ARAC-type regulatory protein	3882098..3882991	Shigella flexneri 2a str. 2457T	1080200
NP_839164.1	CDS	glvB	NC_004741.1	3883802	3884287	R	residues 1 to 161 of 161 are 100.00 pct identical to residues 1 to 161 of 161 from Escherichia coli K-12 : B3682; arbutin specific enzyme IIB component of PTS	complement(3883802..3884287)	Shigella flexneri 2a str. 2457T	1080202
NP_839165.1	CDS	yidP	NC_004741.1	3885713	3886387	D	residues 1 to 224 of 224 are 99.55 pct identical to residues 1 to 224 of 238 from Escherichia coli K-12 : B3684; transcriptional regulator	3885713..3886387	Shigella flexneri 2a str. 2457T	1080204
NP_839166.1	CDS	yidE	NC_004741.1	3886426	3888087	R	residues 1 to 553 of 553 are 88.24 pct identical to residues 9 to 561 of 561 from Escherichia coli K-12 : B3685; hypothetical protein	complement(3886426..3888087)	Shigella flexneri 2a str. 2457T	1080205
NP_839167.1	CDS	ibpB	NC_004741.1	3888283	3888711	R	16 kDa heat shock protein B; associates with aggregated proteins, together with ibpA, to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress; ATP-independent; heat shock chaperone IbpB	complement(3888283..3888711)	Shigella flexneri 2a str. 2457T	1080206
NP_839168.1	CDS	ibpA	NC_004741.1	3888823	3889236	R	with IbpB associates with aggregated proteins to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress; heat shock protein IbpA	complement(3888823..3889236)	Shigella flexneri 2a str. 2457T	1076450
NP_839169.2	CDS	yidQ	NC_004741.1	3889541	3889873	D	residues 1 to 135 of 135 are 100.00 pct identical to residues 1 to 135 of 135 from Escherichia coli K-12 : B3688; hypothetical protein	3889541..3889873	Shigella flexneri 2a str. 2457T	1080207
NP_839170.1	CDS	yidR	NC_004741.1	3889875	3891149	R	residues 1 to 424 of 424 are 94.10 pct identical to residues 1 to 416 of 416 from Escherichia coli K-12 : B3689; hypothetical protein	complement(3889875..3891149)	Shigella flexneri 2a str. 2457T	1080208
NP_839171.1	CDS	yidS	NC_004741.1	3891214	3892314	D	FAD/NAD(P)-binding domain; oxidoreductase	3891214..3892314	Shigella flexneri 2a str. 2457T	1078769
NP_839172.1	CDS	dgoT	NC_004741.1	3892275	3893612	R	residues 1 to 445 of 445 are 97.07 pct identical to residues 1 to 445 of 445 from Escherichia coli K-12 : B3691; D-galactonate transport protein	complement(3892275..3893612)	Shigella flexneri 2a str. 2457T	1076998
NP_839173.1	CDS	dgoK	NC_004741.1	3895433	3896311	R	residues 1 to 292 of 292 are 97.94 pct identical to residues 1 to 292 of 292 from Escherichia coli K-12 : B3693; 2-oxo-3-deoxygalactonate kinase	complement(3895433..3896311)	Shigella flexneri 2a str. 2457T	1080210
NP_839174.1	CDS	yidW	NC_004741.1	3896308	3896997	R	residues 17 to 229 of 229 are 25.76 pct identical to residues 22 to 235 of 257 from Escherichia coli K-12 : B4324; regulator protein for dgo operon	complement(3896308..3896997)	Shigella flexneri 2a str. 2457T	1080211
NP_839176.1	CDS	yidA	NC_004741.1	3897977	3898789	R	YidA; catalyzes the dephosphorylation of erythrose 4-phosphate (preferred substrate), mannose 1-phosphate and p-nitrophenyl phosphate; hydrolyzes the alpha-D-glucose-1-phosphate but not the beta form; member of the haloacid dehalogenase-like hydrolases superfamily and Cof family of proteins; sugar phosphatase	complement(3897977..3898789)	Shigella flexneri 2a str. 2457T	1080213
NP_839177.1	CDS	yidB	NC_004741.1	3898903	3899301	R	residues 1 to 132 of 132 are 98.48 pct identical to residues 4 to 135 of 135 from Escherichia coli K-12 : B3698; hypothetical protein	complement(3898903..3899301)	Shigella flexneri 2a str. 2457T	1080214
NP_839178.1	CDS	gyrB	NC_004741.1	3899541	3901955	R	negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B	complement(3899541..3901955)	Shigella flexneri 2a str. 2457T	1080215
NP_839179.1	CDS	recF	NC_004741.1	3901984	3903057	R	Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F	complement(3901984..3903057)	Shigella flexneri 2a str. 2457T	1080216
NP_839180.1	CDS	dnaN	NC_004741.1	3903057	3904157	R	binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta	complement(3903057..3904157)	Shigella flexneri 2a str. 2457T	1080217
NP_839181.1	CDS	dnaA	NC_004741.1	3904162	3905565	R	binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein	complement(3904162..3905565)	Shigella flexneri 2a str. 2457T	1080218
NP_839182.1	CDS	rpmH	NC_004741.1	3906172	3906312	D	in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34	3906172..3906312	Shigella flexneri 2a str. 2457T	1080219
NP_839183.1	CDS	rnpA	NC_004741.1	3906329	3906688	D	protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P	3906329..3906688	Shigella flexneri 2a str. 2457T	1080220
NP_839184.1	CDS	yidC	NC_004741.1	3906912	3908558	D	functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; inner membrane protein translocase component YidC	3906912..3908558	Shigella flexneri 2a str. 2457T	1080221
NP_839185.1	CDS	trmE	NC_004741.1	3908664	3910028	D	in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE	3908664..3910028	Shigella flexneri 2a str. 2457T	1080222
NP_839186.1	CDS	S4014	NC_004741.1	3910242	3910745	R	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri]; IS1 orfB	complement(3910242..3910745)	Shigella flexneri 2a str. 2457T	1080223
NP_839187.1	CDS	S4015	NC_004741.1	3910664	3910939	R	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(3910664..3910939)	Shigella flexneri 2a str. 2457T	1080224
NP_839188.1	CDS	tnaL	NC_004741.1	3911046	3911120	D	residues 1 to 24 of 24 are 95.83 pct identical to residues 1 to 24 of 24 from Escherichia coli K-12 : B3707; tryptophanase leader peptide	3911046..3911120	Shigella flexneri 2a str. 2457T	1080225
NP_839189.1	CDS	tnaA	NC_004741.1	3911341	3912756	D	tryptophan indole-lyase; catalyzes the formation of indole and pyruvate from tryptophan; tryptophanase	3911341..3912756	Shigella flexneri 2a str. 2457T	1080226
NP_839190.1	CDS	tnaB	NC_004741.1	3912847	3914094	D	tryptophan transporter of low affinity; tryptophan permease TnaB	3912847..3914094	Shigella flexneri 2a str. 2457T	1080227
NP_839191.1	CDS	yidY	NC_004741.1	3914226	3915401	D	Confers resistance to chloramphenicol; multidrug efflux system protein MdtL	3914226..3915401	Shigella flexneri 2a str. 2457T	1080228
NP_839192.1	CDS	S4021	NC_004741.1	3916068	3916781	R	residues 1 to 237 of 237 are 91.13 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAK18576.1|AF348706_265 (AF348706) IS600 orfB [Shigella flexneri]; IS600 orfB	complement(3916068..3916781)	Shigella flexneri 2a str. 2457T	1080230
NP_839193.1	CDS	S4022	NC_004741.1	3916922	3917224	R	residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAF09029.1| (AF139596) unknown [Shigella flexneri]; IS600 orfA	complement(3916922..3917224)	Shigella flexneri 2a str. 2457T	1080231
NP_839194.1	CDS	yieE	NC_004741.1	3917759	3918508	D	residues 1 to 249 of 249 are 98.79 pct identical to residues 5 to 253 of 253 from Escherichia coli K-12 : B3712; hypothetical protein	3917759..3918508	Shigella flexneri 2a str. 2457T	1080232
NP_839195.1	CDS	yieF	NC_004741.1	3918530	3919096	D	residues 1 to 188 of 188 are 100.00 pct identical to residues 1 to 188 of 188 from Escherichia coli K-12 : B3713; hypothetical protein	3918530..3919096	Shigella flexneri 2a str. 2457T	1080233
NP_839196.1	CDS	yieG	NC_004741.1	3919150	3920487	R	residues 1 to 445 of 445 are 90.11 pct identical to residues 1 to 445 of 445 from Escherichia coli K-12 : B3714; membrane / transport protein	complement(3919150..3920487)	Shigella flexneri 2a str. 2457T	1080234
NP_839197.1	CDS	yieH	NC_004741.1	3920652	3921308	D	YieH; catalyzes the dephosphorylation of phosphoenolpyruvate, AMP and p-nitrophenyl phosphate; purine and pyrimidine nucleotides are secondary substrates; member of the haloacid dehalogenase-like hydrolases superfamily; 6-phosphogluconate phosphatase	3920652..3921308	Shigella flexneri 2a str. 2457T	1080235
NP_839198.1	CDS	yieI	NC_004741.1	3921375	3921848	D	might be involved in hypersensitivity to nitrofurzone; inner membrane protein	3921375..3921848	Shigella flexneri 2a str. 2457T	1080236
NP_839199.1	CDS	S4029	NC_004741.1	3922016	3922690	D	residues 1 to 224 of 224 are 99.55 pct identical to residues 1 to 224 of 224 from GenPept : >gb|AAL72464.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; ISSfl3 orfA	3922016..3922690	Shigella flexneri 2a str. 2457T	1080237
NP_839200.1	CDS	S4030	NC_004741.1	3922687	3923037	D	residues 1 to 116 of 116 are 100.00 pct identical to residues 1 to 116 of 116 from GenPept : >gb|AAK18528.1|AF348706_217 (AF348706)  IS orf [Shigella flexneri]; partial; ISSfl3 orfB	3922687..3923037	Shigella flexneri 2a str. 2457T	1080238
NP_839201.1	CDS	S4031	NC_004741.1	3923034	3924635	D	residues 1 to 533 of 533 are 96.99 pct identical to residues 1 to 533 of 533 from GenPept : >gb|AAL72376.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; ISSfl3 orfC	3923034..3924635	Shigella flexneri 2a str. 2457T	1080239
NP_839202.1	CDS	yieK	NC_004741.1	3925288	3926010	R	residues 24 to 232 of 240 are 93.30 pct identical to residues 1 to 209 of 213 from Escherichia coli K-12 : B3718; 6-phosphogluconolactonase	complement(3925288..3926010)	Shigella flexneri 2a str. 2457T	1080241
NP_839203.1	CDS	yieL	NC_004741.1	3926012	3927187	R	residues 1 to 386 of 391 are 93.00 pct identical to residues 12 to 397 of 400 from Escherichia coli K-12 : B3719; xylanase	complement(3926012..3927187)	Shigella flexneri 2a str. 2457T	1080242
NP_839204.1	CDS	yieC	NC_004741.1	3927214	3928791	R	residues 1 to 525 of 525 are 96.57 pct identical to residues 14 to 538 of 538 from Escherichia coli K-12 : B3720; receptor protein	complement(3927214..3928791)	Shigella flexneri 2a str. 2457T	1080243
NP_839205.1	CDS	S4036	NC_004741.1	3929306	3929809	R	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri]; IS1 orfB	complement(3929306..3929809)	Shigella flexneri 2a str. 2457T	1080244
NP_839206.1	CDS	S4037	NC_004741.1	3929728	3930003	R	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(3929728..3930003)	Shigella flexneri 2a str. 2457T	1080245
NP_839207.1	CDS	bglB	NC_004741.1	3930037	3931086	R	residues 1 to 348 of 349 are 97.41 pct identical to residues 1 to 348 of 470 from Escherichia coli K-12 : B3721; phospho-beta-glucosidase B cryptic	complement(3930037..3931086)	Shigella flexneri 2a str. 2457T	1080246
NP_839208.1	CDS	bglF	NC_004741.1	3931105	3932982	R	phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; beta-glucoside-specific PTS system components IIABC	complement(3931105..3932982)	Shigella flexneri 2a str. 2457T	1080247
NP_839209.1	CDS	bglG	NC_004741.1	3933116	3933937	R	positive regulator of the beta-glucoside operon; transcriptional antiterminator; transcriptional antiterminator BglG	complement(3933116..3933937)	Shigella flexneri 2a str. 2457T	1080248
NP_839210.1	CDS	phoU	NC_004741.1	3934224	3934949	R	regulates several genes involved in high affinity phosphate uptake; under conditions of high phosphate concentrations downregulates the PHO regulon; transcriptional regulator PhoU	complement(3934224..3934949)	Shigella flexneri 2a str. 2457T	1080249
NP_839211.1	CDS	pstB	NC_004741.1	3934964	3935737	R	residues 1 to 257 of 257 are 95.33 pct identical to residues 1 to 257 of 257 from Escherichia coli K-12 : B3725; phosphate transporter subunit	complement(3934964..3935737)	Shigella flexneri 2a str. 2457T	1080250
NP_839212.1	CDS	pstA	NC_004741.1	3935829	3936719	R	Part of the ABC transporter complex PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions; phosphate transporter permease subunit PtsA	complement(3935829..3936719)	Shigella flexneri 2a str. 2457T	1080251
NP_839213.1	CDS	pstC	NC_004741.1	3936767	3937678	R	part of the ATP-dependent phosphate uptake system PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions; phosphate transporter permease subunit PstC	complement(3936767..3937678)	Shigella flexneri 2a str. 2457T	1080252
NP_839214.1	CDS	pstS	NC_004741.1	3937765	3938805	R	residues 1 to 346 of 346 are 97.10 pct identical to residues 1 to 346 of 346 from Escherichia coli K-12 : B3728; phosphate ABC transporter substrate-binding protein	complement(3937765..3938805)	Shigella flexneri 2a str. 2457T	1080253
NP_839215.1	CDS	S4046	NC_004741.1	3940059	3940334	D	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	3940059..3940334	Shigella flexneri 2a str. 2457T	1080254
NP_839216.1	CDS	lpfC	NC_004741.1	3940913	3943435	R	residues 1 to 840 of 840 are 99.40 pct identical to residues 1 to 840 of 840 from GenPept : >gb|AAL18163.1| (AY057066) LpfC [Escherichia coli]; long polar fimbriae	complement(3940913..3943435)	Shigella flexneri 2a str. 2457T	1080255
NP_839217.2	CDS	S4049	NC_004741.1	3943581	3943946	D	IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats; insertion sequence 2 OrfA protein	3943581..3943946	Shigella flexneri 2a str. 2457T	1080256
NP_839218.2	CDS	S4050	NC_004741.1	3943904	3944809	D	IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats; insertion element IS2 transposase InsD	3943904..3944809	Shigella flexneri 2a str. 2457T	1080257
NP_839219.1	CDS	iutA	NC_004741.1	3946459	3948654	R	residues 1 to 731 of 731 are 97.40 pct identical to residues 2 to 732 of 732 from GenPept : >gb|AAD44750.1|AF141323_21 (AF141323) IutA [Shigella flexneri]; ferric siderophore receptor	complement(3946459..3948654)	Shigella flexneri 2a str. 2457T	1080258
NP_839220.1	CDS	iucD	NC_004741.1	3948660	3949997	R	residues 1 to 445 of 445 are 100.00 pct identical to residues 1 to 445 of 445 from GenPept : >gb|AAD44749.1|AF141323_20 (AF141323) IucD [Shigella flexneri]; lysine:N6-hydroxylase	complement(3948660..3949997)	Shigella flexneri 2a str. 2457T	1080259
NP_839221.1	CDS	iucC	NC_004741.1	3949994	3951736	R	residues 1 to 580 of 580 are 99.48 pct identical to residues 1 to 580 of 580 from GenPept : >gb|AAK71633.1|AF335540_5 (AF335540) IucC [Shigella boydii]; siderophore biosynthesis protein	complement(3949994..3951736)	Shigella flexneri 2a str. 2457T	1080260
NP_839222.1	CDS	iucB	NC_004741.1	3951736	3952683	R	residues 1 to 315 of 315 are 100.00 pct identical to residues 1 to 315 of 315 from GenPept : >gb|AAK71632.1|AF335540_4 (AF335540) IucB [Shigella boydii]; siderophore biosynthesis protein	complement(3951736..3952683)	Shigella flexneri 2a str. 2457T	1080261
NP_839223.1	CDS	iucA	NC_004741.1	3952684	3954465	R	residues 1 to 593 of 593 are 100.00 pct identical to residues 1 to 593 of 593 from GenPept : >gb|AAD44746.1|AF141323_17 (AF141323) IucA [Shigella flexneri]; siderophore biosynthesis protein	complement(3952684..3954465)	Shigella flexneri 2a str. 2457T	1080262
NP_839224.1	CDS	imm	NC_004741.1	3954544	3955737	D	residues 1 to 397 of 397 are 93.19 pct identical to residues 1 to 397 of 397 from GenPept : >gb|AAD44744.1|AF141323_15 (AF141323) ShiF [Shigella flexneri]; membrane transport protein	3954544..3955737	Shigella flexneri 2a str. 2457T	1080263
NP_839225.1	CDS	shiE	NC_004741.1	3955687	3956658	R	residues 1 to 323 of 323 are 99.68 pct identical to residues 1 to 323 of 323 from NRprotein_Feb03 : >ref|NP_709452.1| orf, partial conserved hypothetical protein [Shigella flexneri 2a str. 301] gb|AAN45159.1|AE015379_1 orf, partial conserved hypothetical protein [Shigella flexneri 2a str. 301]; hypothetical protein	complement(3955687..3956658)	Shigella flexneri 2a str. 2457T	1080264
NP_839226.1	CDS	S4058	NC_004741.1	3956539	3956814	D	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	3956539..3956814	Shigella flexneri 2a str. 2457T	1080265
NP_839227.1	CDS	S4059	NC_004741.1	3956733	3957236	D	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri]; IS1 orfB	3956733..3957236	Shigella flexneri 2a str. 2457T	1080266
NP_839228.1	CDS	shiD	NC_004741.1	3957757	3958155	R	residues 1 to 132 of 132 are 100.00 pct identical to residues 1 to 132 of 132 from NRprotein_Feb03 : >ref|NP_709450.1| colicin V immunity protein shiD [imported] [Shigella flexneri 2a str. 301] pir||T44474 colicin V immunity protein shiD [imported] - Shigella flexneri gb|AAD44741.1|AF141323_12 ShiD [Shigella flexneri] gb|AAD54668.1|AF097520_7 novel colicin immunity protein [Shigella flexneri] gb|AA; colV-immunity protein	complement(3957757..3958155)	Shigella flexneri 2a str. 2457T	1080267
NP_839229.2	CDS	S4060	NC_004741.1	3959474	3959839	D	IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats; insertion sequence 2 OrfA protein	3959474..3959839	Shigella flexneri 2a str. 2457T	1080268
NP_839230.2	CDS	S4061	NC_004741.1	3959797	3960702	D	IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats; insertion element IS2 transposase InsD	3959797..3960702	Shigella flexneri 2a str. 2457T	1080269
NP_839231.1	CDS	S4062	NC_004741.1	3961705	3962031	D	residues 1 to 108 of 108 are 74.07 pct identical to residues 1 to 108 of 108 from GenPept : >emb|CAA35935.1| (X51586) unknown peptide (AA 1-108) [Shigella sonnei]; IS629 orfA	3961705..3962031	Shigella flexneri 2a str. 2457T	1080270
NP_839232.1	CDS	S4063	NC_004741.1	3962267	3962914	D	residues 1 to 215 of 215 are 99.53 pct identical to residues 8 to 222 of 222 from GenPept : >gb|AAL72361.1| (AF386526) transposase [Shigella flexneri 2a]; IS629 orfB	3962267..3962914	Shigella flexneri 2a str. 2457T	1080271
NP_839233.1	CDS	shiC	NC_004741.1	3962995	3963513	R	residues 1 to 172 of 172 are 100.00 pct identical to residues 1 to 172 of 172 from NRprotein_Feb03 : >pir||T44468 hypothetical protein shiC [imported] - Shigella flexneri gb|AAD44735.1|AF141323_6 ShiC [Shigella flexneri] gb|AAD54667.1|AF097520_5 unknown [Shigella flexneri]; hypothetical protein	complement(3962995..3963513)	Shigella flexneri 2a str. 2457T	1080272
NP_839234.1	CDS	S4064	NC_004741.1	3963698	3963997	D	residues 1 to 99 of 99 are 74.74 pct identical to residues 4 to 102 of 102 from GenPept : >gb|AAK18485.1|AF348706_174 (AF348706) orf, hypothetical [Shigella flexneri]; IS3 orfA	3963698..3963997	Shigella flexneri 2a str. 2457T	1080273
NP_839235.1	CDS	S4832	NC_004741.1	3963994	3964386	D	residues 1 to 130 of 130 are 100.00 pct identical to residues 1 to 130 of 130 from NRprotein_Feb03 : >ref|NP_709441.1| transposase tnpB [imported] [Shigella flexneri 2a str. 301] pir||T44467 transposase tnpB [imported] - Shigella flexneri gb|AAD44734.1|AF141323_5 TnpB [Shigella flexneri] gb|AAN45148.1|AE015378_3 transposase tnpB [imported] [Shigella flexneri 2a str. 301]; IS3 orfB	3963994..3964386	Shigella flexneri 2a str. 2457T	1080274
NP_839236.1	CDS	shiB	NC_004741.1	3964845	3965306	R	residues 1 to 153 of 153 are 99.34 pct identical to residues 1 to 153 of 153 from NRprotein_Feb03 : >pir||T44465 hypothetical protein shiB [imported] - Shigella flexneri gb|AAD44732.1|AF141323_3 ShiB [Shigella flexneri]; hypothetical protein	complement(3964845..3965306)	Shigella flexneri 2a str. 2457T	1080275
NP_839237.1	CDS	shiA	NC_004741.1	3965821	3966864	R	residues 1 to 347 of 347 are 100.00 pct identical to residues 1 to 347 of 347 from NRprotein_Feb03 : >ref|NP_709438.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] pir||T44464 hypothetical protein shiA [imported] - Shigella flexneri gb|AAD44731.1|AF141323_2 ShiA [Shigella flexneri] gb|AAN45145.1|AE015377_5 orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]; hypothetical protein	complement(3965821..3966864)	Shigella flexneri 2a str. 2457T	1080276
NP_839238.1	CDS	S4835	NC_004741.1	3967276	3968487	R	residues 1 to 403 of 403 are 100.00 pct identical to residues 1 to 403 of 403 from NRprotein_Feb03 : >ref|NP_709437.1| Sai integrase [Shigella flexneri 2a str. 301] gb|AAD54663.1|AF097520_1 Sai integrase [Shigella flexneri] gb|AAN45144.1|AE015377_4 Sai integrase [Shigella flexneri 2a str. 301]; integrase	complement(3967276..3968487)	Shigella flexneri 2a str. 2457T	1080277
NP_839239.1	CDS	yicI	NC_004741.1	3970539	3972857	D	catalyzes the transfer of alpha-xylosyl residue from alpha-xyloside to xylose, glucose, mannose, fructose, maltose, isomaltose, nigerose, kojibiose, sucrose, and trehalose; shows higher activity against alpha-xylosyl fluoride, isoprimeverose (6-O-alpha-xylopyranosyl-glucopyranose), and alpha-xyloside in xyloglucan oligosaccharides; alpha-xylosidase	3970539..3972857	Shigella flexneri 2a str. 2457T	1080280
NP_839240.1	CDS	yicH	NC_004741.1	3972910	3974619	R	residues 24 to 569 of 569 are 99.08 pct identical to residues 24 to 569 of 569 from Escherichia coli K-12 : B3655; hypothetical protein	complement(3972910..3974619)	Shigella flexneri 2a str. 2457T	1080281
NP_839241.1	CDS	yicE	NC_004741.1	3974740	3976131	R	residues 1 to 463 of 463 are 96.97 pct identical to residues 1 to 463 of 463 from Escherichia coli K-12 : B3654; transporter	complement(3974740..3976131)	Shigella flexneri 2a str. 2457T	1080282
NP_839242.1	CDS	gltS	NC_004741.1	3976411	3977616	D	residues 1 to 401 of 401 are 82.54 pct identical to residues 1 to 401 of 401 from Escherichia coli K-12 : B3653; glutamate transport protein	3976411..3977616	Shigella flexneri 2a str. 2457T	1080283
NP_839243.1	CDS	recG	NC_004741.1	3977650	3979731	R	catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG	complement(3977650..3979731)	Shigella flexneri 2a str. 2457T	1080284
NP_839244.1	CDS	spoU	NC_004741.1	3979737	3980426	R	specifically modifies tRNA at position G18; tRNA guanosine-2'-O-methyltransferase	complement(3979737..3980426)	Shigella flexneri 2a str. 2457T	1080285
NP_839245.1	CDS	spoT	NC_004741.1	3980433	3982541	R	residues 1 to 702 of 702 are 98.14 pct identical to residues 1 to 702 of 702 from Escherichia coli K-12 : B3650; bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase	complement(3980433..3982541)	Shigella flexneri 2a str. 2457T	1080286
NP_839246.1	CDS	rpoZ	NC_004741.1	3982560	3982835	R	promotes RNA polymerase assembly or stability; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega	complement(3982560..3982835)	Shigella flexneri 2a str. 2457T	1080287
NP_839247.1	CDS	gmk	NC_004741.1	3982890	3983513	R	Essential for recycling GMP and indirectly, cGMP; guanylate kinase	complement(3982890..3983513)	Shigella flexneri 2a str. 2457T	1080288
NP_839248.1	CDS	ligB	NC_004741.1	3983771	3985453	D	this ligase is similar to LigA but it lacks the C-terminal BRCT domain; catalyzes strand joining of nicked DNA in the presence of a divalent cation and NAD+; NAD-dependent DNA ligase LigB	3983771..3985453	Shigella flexneri 2a str. 2457T	1080289
NP_839249.1	CDS	yicG	NC_004741.1	3985450	3986121	R	residues 1 to 223 of 223 are 73.54 pct identical to residues 1 to 223 of 223 from Escherichia coli K-12 : B3646; hypothetical protein	complement(3985450..3986121)	Shigella flexneri 2a str. 2457T	1080290
NP_839250.1	CDS	dinD	NC_004741.1	3986358	3987182	R	residues 1 to 274 of 274 are 97.81 pct identical to residues 5 to 278 of 278 from Escherichia coli K-12 : B3645; DNA-damage-inducible protein D	complement(3986358..3987182)	Shigella flexneri 2a str. 2457T	1080291
NP_839251.1	CDS	yicC	NC_004741.1	3987403	3988266	R	residues 1 to 287 of 287 are 94.42 pct identical to residues 1 to 287 of 287 from Escherichia coli K-12 : B3644; hypothetical protein	complement(3987403..3988266)	Shigella flexneri 2a str. 2457T	1080292
NP_839252.1	CDS	rph	NC_004741.1	3988393	3989109	D	RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH	3988393..3989109	Shigella flexneri 2a str. 2457T	1080293
NP_839253.1	CDS	pyrE	NC_004741.1	3989175	3989816	D	involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase	3989175..3989816	Shigella flexneri 2a str. 2457T	1080294
NP_839254.2	CDS	slmA	NC_004741.1	3989853	3990449	R	FtsZ binding protein; synthetically lethal with a defect in the Min system; this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly; nucleoid occlusion protein	complement(3989853..3990449)	Shigella flexneri 2a str. 2457T	1080295
NP_839255.1	CDS	dut	NC_004741.1	3990556	3991014	R	catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase	complement(3990556..3991014)	Shigella flexneri 2a str. 2457T	1080296
NP_839256.2	CDS	dfp	NC_004741.1	3990992	3992212	R	catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase	complement(3990992..3992212)	Shigella flexneri 2a str. 2457T	1080297
NP_839257.2	CDS	radC	NC_004741.1	3992378	3993052	D	Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC	3992378..3993052	Shigella flexneri 2a str. 2457T	1080298
NP_839258.1	CDS	rpmB	NC_004741.1	3993269	3993505	D	required for 70S ribosome assembly; 50S ribosomal protein L28	3993269..3993505	Shigella flexneri 2a str. 2457T	1080299
NP_839259.1	CDS	rpmG	NC_004741.1	3993526	3993693	D	in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33	3993526..3993693	Shigella flexneri 2a str. 2457T	1080300
NP_839260.1	CDS	mutM	NC_004741.1	3993791	3994600	D	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase	3993791..3994600	Shigella flexneri 2a str. 2457T	1080301
NP_839261.1	CDS	coaD	NC_004741.1	3994639	3995118	R	Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase	complement(3994639..3995118)	Shigella flexneri 2a str. 2457T	1080302
NP_839262.1	CDS	kdtA	NC_004741.1	3995126	3996403	R	catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A; 3-deoxy-D-manno-octulosonic-acid transferase	complement(3995126..3996403)	Shigella flexneri 2a str. 2457T	1080303
NP_839263.1	CDS	S4097	NC_004741.1	3996537	3996812	D	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	3996537..3996812	Shigella flexneri 2a str. 2457T	1080304
NP_839264.1	CDS	S4098	NC_004741.1	3996731	3997234	D	residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri]; IS1 orfB	3996731..3997234	Shigella flexneri 2a str. 2457T	1080305
NP_839265.1	CDS	waaQ	NC_004741.1	3997592	3998650	D	residues 1 to 352 of 352 are 96.59 pct identical to residues 1 to 352 of 352 from GenPept : >gb|AAG58776.1|AE005590_11 (AE005590)  LPS biosynthesis enzyme [Escherichia coli O157:H7 EDL933]; lipopolysaccharide core biosynthesis protein	3997592..3998650	Shigella flexneri 2a str. 2457T	1080306
NP_839266.1	CDS	waaG	NC_004741.1	3998647	3999771	D	residues 1 to 374 of 374 are 99.46 pct identical to residues 1 to 374 of 374 from GenPept : >gb|AAC69678.1| (AF019746) UDP-glucose:(heptosyl) LPS alpha1,3-glucosyltransferase WaaG [Escherichia coli]; LPS alpha1,3-glucosyltransferase	3998647..3999771	Shigella flexneri 2a str. 2457T	1080307
NP_839267.1	CDS	waaP	NC_004741.1	3999755	4000561	D	residues 1 to 268 of 268 are 93.65 pct identical to residues 1 to 268 of 268 from GenPept : >gb|AAG58774.1|AE005590_9 (AE005590)  LPS biosynthesis enzyme [Escherichia coli O157:H7 EDL933]; lipopolysaccharide core biosynthesis protein	3999755..4000561	Shigella flexneri 2a str. 2457T	1080308
NP_839268.1	CDS	waaL	NC_004741.1	4000604	4001611	D	residues 1 to 335 of 335 are 99.70 pct identical to residues 1 to 335 of 335 from GenPept : >gb|AAG58773.1|AE005590_8 (AE005590)  LPS biosynthesis enzyme [Escherichia coli O157:H7 EDL933]; UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase	4000604..4001611	Shigella flexneri 2a str. 2457T	1080309
NP_839269.1	CDS	waaY	NC_004741.1	4001637	4002344	D	residues 1 to 235 of 235 are 93.19 pct identical to residues 1 to 235 of 235 from GenPept : >gb|AAC69664.1| (AF019745) WaaY [Escherichia coli]; lipopolysaccharide core biosynthesis protein	4001637..4002344	Shigella flexneri 2a str. 2457T	1080310
NP_839270.1	CDS	waaJ	NC_004741.1	4002369	4003382	D	residues 1 to 337 of 337 are 94.06 pct identical to residues 1 to 337 of 337 from GenPept : >gb|AAG58771.1|AE005590_6 (AE005590)  LPS biosynthesis enzyme [Escherichia coli O157:H7 EDL933]; UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase	4002369..4003382	Shigella flexneri 2a str. 2457T	1080311
NP_839271.1	CDS	waaD	NC_004741.1	4003391	4004533	D	residues 1 to 380 of 380 are 96.31 pct identical to residues 1 to 380 of 380 from GenPept : >gb|AAG58770.1|AE005590_5 (AE005590)  LPS biosynthesis enzyme [Escherichia coli O157:H7 EDL933]; lipopolysaccharide 1,2-N- acetylglucosaminetransferase	4003391..4004533	Shigella flexneri 2a str. 2457T	1080312
NP_839272.1	CDS	waaI	NC_004741.1	4004569	4005777	R	residues 1 to 402 of 402 are 93.28 pct identical to residues 1 to 402 of 402 from GenPept : >gb|AAG58769.1|AE005590_4 (AE005590)  LPS biosynthesis enzyme [Escherichia coli O157:H7 EDL933]; lipid A-core, surface polymer ligase	complement(4004569..4005777)	Shigella flexneri 2a str. 2457T	1080189
NP_839273.1	CDS	rfaC	NC_004741.1	4005774	4006736	R	residues 1 to 307 of 320 are 94.13 pct identical to residues 11 to 317 of 319 from Escherichia coli K-12 : B3621; involved in lipopolysaccharide core biosynthesis; ADP-heptose--LPS heptosyltransferase	complement(4005774..4006736)	Shigella flexneri 2a str. 2457T	1080313
NP_839274.1	CDS	rfaF	NC_004741.1	4006770	4007816	R	catalyzes the transfer of the second heptose to the heptosyl-KDO2 moiety of the lipopolysaccharide inner core; ADP-heptose--LPS heptosyltransferase	complement(4006770..4007816)	Shigella flexneri 2a str. 2457T	1080314
NP_839275.1	CDS	rfaD	NC_004741.1	4007826	4008758	R	catalyzes the interconversion between ADP-D-glycero-beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose; ADP-L-glycero-D-manno-heptose-6-epimerase	complement(4007826..4008758)	Shigella flexneri 2a str. 2457T	1080315
NP_839276.1	CDS	kbl	NC_004741.1	4010194	4011390	D	catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine; 2-amino-3-ketobutyrate coenzyme A ligase	4010194..4011390	Shigella flexneri 2a str. 2457T	1080316
NP_839277.1	CDS	tdh	NC_004741.1	4011400	4012425	D	converts threonine and NAD to 1,2-amino-3-oxobutanoate and NADH; functions in threonine catabolism; L-threonine 3-dehydrogenase	4011400..4012425	Shigella flexneri 2a str. 2457T	1080317
NP_839278.1	CDS	S4112	NC_004741.1	4012655	4012930	D	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	4012655..4012930	Shigella flexneri 2a str. 2457T	1080939
NP_839279.1	CDS	S4113	NC_004741.1	4012849	4013352	D	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri]; IS1 orfB	4012849..4013352	Shigella flexneri 2a str. 2457T	1079655
NP_839280.1	CDS	yibD	NC_004741.1	4013434	4013574	D	residues 1 to 46 of 46 are 100.00 pct identical to residues 299 to 344 of 344 from Escherichia coli K-12 : B3615; regulator	4013434..4013574	Shigella flexneri 2a str. 2457T	1080318
NP_839281.1	CDS	yibQ	NC_004741.1	4013561	4014394	R	residues 1 to 277 of 277 are 99.63 pct identical to residues 1 to 277 of 277 from Escherichia coli K-12 : B3614; hypothetical protein	complement(4013561..4014394)	Shigella flexneri 2a str. 2457T	1080319
NP_839282.2	CDS	yibP	NC_004741.1	4014524	4015807	R	residues 1 to 419 of 419 are 92.84 pct identical to residues 9 to 427 of 427 from Escherichia coli K-12 : B3613; hypothetical protein	complement(4014524..4015807)	Shigella flexneri 2a str. 2457T	1080320
NP_839283.1	CDS	yibO	NC_004741.1	4015817	4017361	R	catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase	complement(4015817..4017361)	Shigella flexneri 2a str. 2457T	1080321
NP_839284.1	CDS	yibN	NC_004741.1	4017606	4018037	D	residues 1 to 143 of 143 are 99.30 pct identical to residues 1 to 143 of 143 from Escherichia coli K-12 : B3611; hypothetical protein	4017606..4018037	Shigella flexneri 2a str. 2457T	1080322
NP_839285.1	CDS	grxC	NC_004741.1	4018179	4018430	D	residues 1 to 83 of 83 are 98.79 pct identical to residues 1 to 83 of 83 from Escherichia coli K-12 : B3610; glutaredoxin 3	4018179..4018430	Shigella flexneri 2a str. 2457T	1080323
NP_839286.1	CDS	secB	NC_004741.1	4018493	4018960	D	molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB	4018493..4018960	Shigella flexneri 2a str. 2457T	1080324
NP_839287.1	CDS	gpsA	NC_004741.1	4018960	4019979	D	catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	4018960..4019979	Shigella flexneri 2a str. 2457T	1080325
NP_839288.1	CDS	cysE	NC_004741.1	4020059	4020880	D	catalyzes the O-acetylation of serine; serine acetyltransferase	4020059..4020880	Shigella flexneri 2a str. 2457T	1080326
NP_839289.1	CDS	yibK	NC_004741.1	4020933	4021406	R	member of the SPOUT superfamily of RNA methyltransferases; no methyltransferase activity observed with certain tRNA substrates; tRNA/rRNA methyltransferase YibK	complement(4020933..4021406)	Shigella flexneri 2a str. 2457T	1080327
NP_839290.1	CDS	lldD	NC_004741.1	4021602	4022792	R	flavin mononucleotide-dependent dehydrogenase; functions in aerobic respiration and also has a role in anaerobic nitrate respiration; L-lactate dehydrogenase	complement(4021602..4022792)	Shigella flexneri 2a str. 2457T	1078229
NP_839291.1	CDS	lldR	NC_004741.1	4022789	4023565	R	represses the lctPRD operon; DNA-binding transcriptional repressor LldR	complement(4022789..4023565)	Shigella flexneri 2a str. 2457T	1080328
NP_839292.1	CDS	lldP	NC_004741.1	4023565	4025220	R	residues 1 to 551 of 551 are 84.93 pct identical to residues 1 to 551 of 551 from Escherichia coli K-12 : B3603; L-lactate permease	complement(4023565..4025220)	Shigella flexneri 2a str. 2457T	1080329
NP_839293.1	CDS	S4130	NC_004741.1	4031481	4031756	D	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	4031481..4031756	Shigella flexneri 2a str. 2457T	1080331
NP_839294.1	CDS	S4131	NC_004741.1	4031675	4032178	D	residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri]; IS1 orfB	4031675..4032178	Shigella flexneri 2a str. 2457T	1080332
NP_839295.1	CDS	yibL	NC_004741.1	4032297	4032659	R	residues 1 to 120 of 120 are 85.83 pct identical to residues 1 to 120 of 120 from Escherichia coli K-12 : B3602; hypothetical protein	complement(4032297..4032659)	Shigella flexneri 2a str. 2457T	1080333
NP_839296.1	CDS	mtlR	NC_004741.1	4033164	4033751	R	Acts as a repressor of the mtlAD operon; mannitol repressor protein	complement(4033164..4033751)	Shigella flexneri 2a str. 2457T	1080334
NP_839297.1	CDS	mtlD	NC_004741.1	4033751	4034899	R	residues 1 to 382 of 382 are 98.95 pct identical to residues 1 to 382 of 382 from Escherichia coli K-12 : B3600; mannitol-1-phosphate 5-dehydrogenase	complement(4033751..4034899)	Shigella flexneri 2a str. 2457T	1080335
NP_839298.1	CDS	mtlA	NC_004741.1	4034994	4036907	R	residues 1 to 637 of 637 are 90.42 pct identical to residues 1 to 637 of 637 from Escherichia coli K-12 : B3599; PTS system, mannitol-specific enzyme IIABC components	complement(4034994..4036907)	Shigella flexneri 2a str. 2457T	1080336
NP_839299.1	CDS	yibI	NC_004741.1	4037444	4037806	D	residues 1 to 120 of 120 are 99.16 pct identical to residues 1 to 120 of 120 from Escherichia coli K-12 : B3598; hypothetical protein	4037444..4037806	Shigella flexneri 2a str. 2457T	1080337
NP_839300.1	CDS	yibH	NC_004741.1	4037809	4038894	D	residues 24 to 361 of 361 are 100.00 pct identical to residues 41 to 378 of 378 from Escherichia coli K-12 : B3597; hypothetical protein	4037809..4038894	Shigella flexneri 2a str. 2457T	1080338
NP_839301.1	CDS	yibF	NC_004741.1	4038965	4039573	D	residues 1 to 202 of 202 are 99.50 pct identical to residues 1 to 202 of 202 from Escherichia coli K-12 : B3592; glutathione S-transferase	4038965..4039573	Shigella flexneri 2a str. 2457T	1080339
NP_839302.1	CDS	selA	NC_004741.1	4039671	4041062	D	catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis; selenocysteine synthase	4039671..4041062	Shigella flexneri 2a str. 2457T	1080340
NP_839303.1	CDS	selB	NC_004741.1	4041059	4042903	D	residues 1 to 614 of 614 are 98.37 pct identical to residues 1 to 614 of 614 from Escherichia coli K-12 : B3590; selenocysteinyl-tRNA-specific translation factor	4041059..4042903	Shigella flexneri 2a str. 2457T	1080341
NP_839304.1	CDS	yiaY	NC_004741.1	4043093	4044244	D	residues 1 to 381 of 383 are 96.06 pct identical to residues 1 to 381 of 382 from Escherichia coli K-12 : B3589; alcohol dehydrogenase	4043093..4044244	Shigella flexneri 2a str. 2457T	1080342
NP_839305.1	CDS	aldB	NC_004741.1	4044319	4045947	D	residues 1 to 542 of 542 are 96.30 pct identical to residues 1 to 542 of 542 from Escherichia coli K-12 : B3588; aldehyde dehydrogenase B (lactaldehyde dehydrogenase)	4044319..4045947	Shigella flexneri 2a str. 2457T	1080343
NP_839306.1	CDS	S4143	NC_004741.1	4046643	4047146	R	residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri]; IS1 orfB	complement(4046643..4047146)	Shigella flexneri 2a str. 2457T	1080344
NP_839307.1	CDS	S4144	NC_004741.1	4047065	4047340	R	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(4047065..4047340)	Shigella flexneri 2a str. 2457T	1080345
NP_839308.1	CDS	S4145	NC_004741.1	4047374	4048666	R	residues 27 to 390 of 430 are 83.51 pct identical to residues 27 to 390 of 424 from Escherichia coli K-12 : B3578; hypothetical protein	complement(4047374..4048666)	Shigella flexneri 2a str. 2457T	1080346
NP_839309.1	CDS	S4147	NC_004741.1	4049001	4049504	R	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri]; IS1 orfB	complement(4049001..4049504)	Shigella flexneri 2a str. 2457T	1079322
NP_839310.1	CDS	S4148	NC_004741.1	4049423	4049698	R	residues 1 to 91 of 91 are 98.90 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAA96691.1| (M37616) insA gene product [Insertion sequence IS1]; IS1 orfA	complement(4049423..4049698)	Shigella flexneri 2a str. 2457T	1080347
NP_839311.1	CDS	yiaK	NC_004741.1	4049913	4050911	R	NAD(P)H-dependent; catalyzes the reduction of 2,3-diketo-L-gulonate to 3-keto-L-gulonate; 2,3-diketo-L-gulonate reductase	complement(4049913..4050911)	Shigella flexneri 2a str. 2457T	1080353
NP_839312.1	CDS	yiaJ	NC_004741.1	4051111	4051959	D	residues 1 to 282 of 282 are 99.64 pct identical to residues 1 to 282 of 282 from Escherichia coli K-12 : B3574; regulator	4051111..4051959	Shigella flexneri 2a str. 2457T	1080355
NP_839313.1	CDS	yiaI	NC_004741.1	4052061	4052534	D	residues 1 to 157 of 157 are 97.45 pct identical to residues 1 to 157 of 157 from Escherichia coli K-12 : B3573; hypothetical protein	4052061..4052534	Shigella flexneri 2a str. 2457T	1080357
NP_839314.1	CDS	avtA	NC_004741.1	4052685	4053938	R	transaminase C; catalyzes transamination of alanine, valine, and 2-aminobutyrate with their respective 2-keto acids; also catalyzes terminal step in valine biosynthesis; valine--pyruvate transaminase	complement(4052685..4053938)	Shigella flexneri 2a str. 2457T	1080358
NP_839315.1	CDS	malS	NC_004741.1	4054116	4056146	R	periplasmic enzyme that degrades maltodextrins that enter via the outer membrane porin LamB; hydrolyzes alpha-(1,4) glycosidic linkages; contains internal disulfide bonds; periplasmic alpha-amylase precursor	complement(4054116..4056146)	Shigella flexneri 2a str. 2457T	1080359
NP_839316.1	CDS	bax	NC_004741.1	4056466	4057290	D	residues 1 to 274 of 274 are 99.27 pct identical to residues 1 to 274 of 274 from Escherichia coli K-12 : B3570; hypothetical protein	4056466..4057290	Shigella flexneri 2a str. 2457T	1080360
NP_839317.1	CDS	xylH	NC_004741.1	4058654	4059835	R	residues 1 to 393 of 393 are 81.67 pct identical to residues 1 to 393 of 393 from Escherichia coli K-12 : B3568; xylose transporter membrane component	complement(4058654..4059835)	Shigella flexneri 2a str. 2457T	1080362
NP_839318.1	CDS	xylG	NC_004741.1	4059813	4061354	R	with XylFH is part of the high affinity xylose ABC transporter; xylose transporter ATP-binding subunit	complement(4059813..4061354)	Shigella flexneri 2a str. 2457T	1080363
NP_839319.1	CDS	xylF	NC_004741.1	4061432	4062424	R	periplasmic substrate-binding component of the ATP-dependent xylose transport system; high affinity; D-xylose transporter subunit XylF	complement(4061432..4062424)	Shigella flexneri 2a str. 2457T	1080364
NP_839320.1	CDS	xylB	NC_004741.1	4064184	4065638	D	residues 1 to 484 of 484 are 89.46 pct identical to residues 1 to 484 of 484 from Escherichia coli K-12 : B3564; xylulokinase	4064184..4065638	Shigella flexneri 2a str. 2457T	1080366
NP_839321.1	CDS	yiaB	NC_004741.1	4065807	4066148	D	residues 1 to 112 of 113 are 98.21 pct identical to residues 5 to 116 of 117 from Escherichia coli K-12 : B3563; hypothetical protein	4065807..4066148	Shigella flexneri 2a str. 2457T	1080367
NP_839322.1	CDS	yiaA	NC_004741.1	4066194	4066631	D	residues 1 to 145 of 145 are 100.00 pct identical to residues 2 to 146 of 146 from Escherichia coli K-12 : B3562; hypothetical protein	4066194..4066631	Shigella flexneri 2a str. 2457T	1080368
NP_839323.1	CDS	yiaH	NC_004741.1	4066673	4067668	R	residues 1 to 331 of 331 are 92.14 pct identical to residues 1 to 331 of 331 from Escherichia coli K-12 : B3561; hypothetical protein	complement(4066673..4067668)	Shigella flexneri 2a str. 2457T	1080369
NP_839324.1	CDS	glyQ	NC_004741.1	4068237	4069148	D	glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha	4068237..4069148	Shigella flexneri 2a str. 2457T	1080371
NP_839325.1	CDS	glyS	NC_004741.1	4069158	4071227	D	glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta	4069158..4071227	Shigella flexneri 2a str. 2457T	1080372
NP_839326.1	CDS	S4167	NC_004741.1	4071285	4071788	R	residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri]; IS1 orfB	complement(4071285..4071788)	Shigella flexneri 2a str. 2457T	1080373
NP_839327.1	CDS	S4168	NC_004741.1	4071707	4071982	R	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(4071707..4071982)	Shigella flexneri 2a str. 2457T	1080374
NP_839328.1	CDS	S4169	NC_004741.1	4072203	4072499	D	hypothetical protein	4072203..4072499	Shigella flexneri 2a str. 2457T	1080375
NP_839329.1	CDS	yhiW	NC_004741.1	4076000	4076728	R	residues 1 to 242 of 242 are 100.00 pct identical to residues 1 to 242 of 242 from Escherichia coli K-12 : B3515; ARAC-type regulatory protein	complement(4076000..4076728)	Shigella flexneri 2a str. 2457T	1080377
NP_839330.1	CDS	yhiX	NC_004741.1	4077096	4077920	R	regulates genes in response to acid and/or during stationary phase; DNA-binding transcriptional regulator GadX	complement(4077096..4077920)	Shigella flexneri 2a str. 2457T	1080378
NP_839331.1	CDS	gadA	NC_004741.1	4078290	4079690	R	residues 1 to 466 of 466 are 99.78 pct identical to residues 1 to 466 of 466 from Escherichia coli K-12 : B3517; glutamate decarboxylase	complement(4078290..4079690)	Shigella flexneri 2a str. 2457T	1080379
NP_839332.1	CDS	yhjA	NC_004741.1	4079901	4081298	R	residues 1 to 465 of 465 are 99.56 pct identical to residues 1 to 465 of 465 from Escherichia coli K-12 : B3518; cytochrome C peroxidase	complement(4079901..4081298)	Shigella flexneri 2a str. 2457T	1080380
NP_839333.1	CDS	S4175	NC_004741.1	4081357	4081860	R	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri]; IS1 orfB	complement(4081357..4081860)	Shigella flexneri 2a str. 2457T	1080381
NP_839334.1	CDS	S4177	NC_004741.1	4081779	4082054	R	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(4081779..4082054)	Shigella flexneri 2a str. 2457T	1080382
NP_839335.1	CDS	S4178	NC_004741.1	4082600	4083451	D	residues 1 to 283 of 283 are 99.64 pct identical to residues 1 to 283 of 283 from Escherichia coli K-12 : B3558; IS150 transposase	4082600..4083451	Shigella flexneri 2a str. 2457T	1080383
NP_839336.1	CDS	cspA	NC_004741.1	4083892	4084104	R	residues 1 to 70 of 70 are 100.00 pct identical to residues 1 to 70 of 70 from Escherichia coli K-12 : B3556; major cold shock protein	complement(4083892..4084104)	Shigella flexneri 2a str. 2457T	1080384
NP_839337.1	CDS	yiaG	NC_004741.1	4084550	4084675	R	residues 1 to 41 of 41 are 100.00 pct identical to residues 1 to 41 of 96 from Escherichia coli K-12 : B3555; hypothetical protein	complement(4084550..4084675)	Shigella flexneri 2a str. 2457T	1080385
NP_839338.1	CDS	yiaF	NC_004741.1	4084989	4085819	D	residues 1 to 276 of 276 are 94.56 pct identical to residues 1 to 276 of 276 from Escherichia coli K-12 : B3554; hypothetical protein	4084989..4085819	Shigella flexneri 2a str. 2457T	1080386
NP_839339.1	CDS	yiaE	NC_004741.1	4085869	4086843	R	Involved in the metabolism of aromatic amino acids; 2-hydroxyacid dehydrogenase	complement(4085869..4086843)	Shigella flexneri 2a str. 2457T	1080387
NP_839340.2	CDS	yiaD	NC_004741.1	4086947	4087597	R	residues 1 to 208 of 208 are 88.94 pct identical to residues 12 to 219 of 219 from Escherichia coli K-12 : B3552; outer membrane lipoprotein	complement(4086947..4087597)	Shigella flexneri 2a str. 2457T	1080388
NP_839341.1	CDS	bisC	NC_004741.1	4087814	4090093	D	residues 21 to 759 of 759 are 98.78 pct identical to residues 1 to 739 of 739 from Escherichia coli K-12 : B3551; biotin sulfoxide reductase	4087814..4090093	Shigella flexneri 2a str. 2457T	1080389
NP_839342.1	CDS	yiaC	NC_004741.1	4090062	4090502	R	residues 1 to 146 of 146 are 97.94 pct identical to residues 1 to 146 of 146 from Escherichia coli K-12 : B3550; hypothetical protein	complement(4090062..4090502)	Shigella flexneri 2a str. 2457T	1080390
NP_839343.1	CDS	tag	NC_004741.1	4090499	4091062	R	constitutive, catalyzes the hydrolysis of alkylated DNA, releasing 3-methyladenine; 3-methyladenine DNA glycosylase	complement(4090499..4091062)	Shigella flexneri 2a str. 2457T	1080392
NP_839344.1	CDS	yhjY	NC_004741.1	4091220	4091918	D	residues 1 to 232 of 232 are 99.13 pct identical to residues 3 to 234 of 234 from Escherichia coli K-12 : B3548; lipase	4091220..4091918	Shigella flexneri 2a str. 2457T	1080393
NP_839345.1	CDS	yhjX	NC_004741.1	4092147	4093355	D	residues 1 to 402 of 402 are 82.08 pct identical to residues 1 to 402 of 402 from Escherichia coli K-12 : B3547; resistance protein	4092147..4093355	Shigella flexneri 2a str. 2457T	1080394
NP_839346.2	CDS	yhjW	NC_004741.1	4093679	4095370	D	catalyzes the addition of a phosphoethanolamine group to the outer Kdo residue of lipopolysaccharide; phosphoethanolamine transferase	4093679..4095370	Shigella flexneri 2a str. 2457T	1080395
NP_839347.1	CDS	dppA	NC_004741.1	4096282	4097889	D	residues 1 to 535 of 535 are 97.19 pct identical to residues 1 to 535 of 535 from Escherichia coli K-12 : B3544; dipeptide transport protein	4096282..4097889	Shigella flexneri 2a str. 2457T	1080397
NP_839348.1	CDS	dppB	NC_004741.1	4098197	4099216	D	transports peptides consisting of two or three amino acids; dipeptide transporter permease DppB	4098197..4099216	Shigella flexneri 2a str. 2457T	1080398
NP_839349.1	CDS	dppC	NC_004741.1	4099226	4100128	D	residues 1 to 300 of 300 are 89.99 pct identical to residues 1 to 300 of 300 from Escherichia coli K-12 : B3542; dipeptide transporter	4099226..4100128	Shigella flexneri 2a str. 2457T	1080399
NP_839350.1	CDS	dppD	NC_004741.1	4100139	4101122	D	DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF; dipeptide transporter ATP-binding subunit	4100139..4101122	Shigella flexneri 2a str. 2457T	1080400
NP_839351.1	CDS	dppF	NC_004741.1	4101119	4102123	D	Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides; dipeptide transporter ATP-binding subunit	4101119..4102123	Shigella flexneri 2a str. 2457T	1080401
NP_839352.1	CDS	yhjV	NC_004741.1	4102153	4103424	R	residues 1 to 404 of 423 are 96.03 pct identical to residues 1 to 404 of 423 from Escherichia coli K-12 : B3539; transporter protein	complement(4102153..4103424)	Shigella flexneri 2a str. 2457T	1080402
NP_839353.1	CDS	yhjU	NC_004741.1	4104577	4106256	R	residues 1 to 559 of 559 are 93.73 pct identical to residues 1 to 559 of 559 from Escherichia coli K-12 : B3538; hypothetical protein	complement(4104577..4106256)	Shigella flexneri 2a str. 2457T	1080403
NP_839354.1	CDS	yhjT	NC_004741.1	4106253	4106444	R	residues 2 to 63 of 63 are 85.48 pct identical to residues 1 to 62 of 62 from Escherichia coli K-12 : B3537; hypothetical protein	complement(4106253..4106444)	Shigella flexneri 2a str. 2457T	1080404
NP_839355.1	CDS	yhjS	NC_004741.1	4106441	4108012	R	residues 1 to 523 of 523 are 99.80 pct identical to residues 1 to 523 of 523 from Escherichia coli K-12 : B3536; protease	complement(4106441..4108012)	Shigella flexneri 2a str. 2457T	1080405
NP_839356.1	CDS	yhjR	NC_004741.1	4108285	4108473	D	residues 1 to 62 of 62 are 100.00 pct identical to residues 1 to 62 of 62 from Escherichia coli K-12 : B3535; hypothetical protein	4108285..4108473	Shigella flexneri 2a str. 2457T	1080406
NP_839357.1	CDS	yhjQ	NC_004741.1	4108485	4109237	D	residues 24 to 250 of 250 are 99.55 pct identical to residues 16 to 242 of 242 from Escherichia coli K-12 : B3534; cell division protein	4108485..4109237	Shigella flexneri 2a str. 2457T	1080407
NP_839358.1	CDS	yhjN	NC_004741.1	4111892	4114201	D	binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); cellulose synthase regulator protein	4111892..4114201	Shigella flexneri 2a str. 2457T	1080409
NP_839359.1	CDS	yhjM	NC_004741.1	4114208	4115314	D	catalyzes the hydrolysis of 1,4-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans; endo-1,4-D-glucanase	4114208..4115314	Shigella flexneri 2a str. 2457T	1080412
NP_839360.2	CDS	yhjK	NC_004741.1	4117740	4119695	D	HmsP in Yersinia pestis plays a role in invasion of epithelial cells; the EAL-domain portion of HmsP from Y. pestis shows phosphodiesterase activity which is required for the inhibition of biofilm formation; inner membrane protein; similar to a  phosphodiesterase from E. coli; phosphodiesterase	4117740..4119695	Shigella flexneri 2a str. 2457T	1080416
NP_839361.1	CDS	dctA	NC_004741.1	4119885	4121171	D	involved in the transport of C4-dicarboxylates across the membrane; C4-dicarboxylate transporter DctA	4119885..4121171	Shigella flexneri 2a str. 2457T	1080417
NP_839362.1	CDS	yhjJ	NC_004741.1	4121392	4122888	D	residues 1 to 498 of 498 are 94.57 pct identical to residues 1 to 498 of 498 from Escherichia coli K-12 : B3527; hypothetical protein	4121392..4122888	Shigella flexneri 2a str. 2457T	1080418
NP_839363.1	CDS	kdgK	NC_004741.1	4122984	4124132	R	residues 1 to 382 of 382 are 96.07 pct identical to residues 1 to 382 of 382 from Escherichia coli K-12 : B3526; ketodeoxygluconokinase	complement(4122984..4124132)	Shigella flexneri 2a str. 2457T	1080419
NP_839364.1	CDS	yhjH	NC_004741.1	4124145	4124912	D	in Escherichia coli this protein is involved in flagellar function; EAL domain-containing protein	4124145..4124912	Shigella flexneri 2a str. 2457T	1080420
NP_839365.1	CDS	yhjG	NC_004741.1	4124982	4127042	D	residues 1 to 686 of 686 are 88.48 pct identical to residues 6 to 691 of 691 from Escherichia coli K-12 : B3524; hypothetical protein	4124982..4127042	Shigella flexneri 2a str. 2457T	1080421
NP_839366.1	CDS	yhjE	NC_004741.1	4127224	4128546	R	residues 1 to 440 of 440 are 86.59 pct identical to residues 1 to 440 of 440 from Escherichia coli K-12 : B3523; transporter	complement(4127224..4128546)	Shigella flexneri 2a str. 2457T	1080422
NP_839367.1	CDS	yhjD	NC_004741.1	4128957	4129970	R	residues 1 to 337 of 337 are 99.10 pct identical to residues 1 to 337 of 337 from Escherichia coli K-12 : B3522; hypothetical protein	complement(4128957..4129970)	Shigella flexneri 2a str. 2457T	1080423
NP_839368.1	CDS	yhjC	NC_004741.1	4130019	4130990	R	residues 1 to 323 of 323 are 98.14 pct identical to residues 1 to 323 of 323 from Escherichia coli K-12 : B3521; transcriptional regulator LYSR-type	complement(4130019..4130990)	Shigella flexneri 2a str. 2457T	1080424
NP_839369.1	CDS	yhjB	NC_004741.1	4131438	4132040	D	residues 1 to 200 of 200 are 99.00 pct identical to residues 1 to 200 of 200 from Escherichia coli K-12 : B3520; regulator	4131438..4132040	Shigella flexneri 2a str. 2457T	1080425
NP_839370.1	CDS	S4216	NC_004741.1	4132056	4133384	R	residues 1 to 442 of 442 are 99.77 pct identical to residues 7 to 448 of 448 from GenPept : >gb|AAK18333.1|AF348706_22 (AF348706) IS4 orf [Shigella flexneri]; IS4 orf	complement(4132056..4133384)	Shigella flexneri 2a str. 2457T	1080426
NP_839371.1	CDS	treF	NC_004741.1	4133529	4135178	R	cytoplasmic; catalyzes the hydrolysis of trehalose to glucose; trehalase	complement(4133529..4135178)	Shigella flexneri 2a str. 2457T	1080413
NP_839372.1	CDS	S4218	NC_004741.1	4135449	4135724	D	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	4135449..4135724	Shigella flexneri 2a str. 2457T	1080427
NP_839373.1	CDS	S4219	NC_004741.1	4135643	4136146	D	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri]; IS1 orfB	4135643..4136146	Shigella flexneri 2a str. 2457T	1080428
NP_839374.1	CDS	yhiE	NC_004741.1	4137898	4138425	R	residues 1 to 175 of 175 are 100.00 pct identical to residues 1 to 175 of 175 from Escherichia coli K-12 : B3512; hypothetical protein	complement(4137898..4138425)	Shigella flexneri 2a str. 2457T	1077417
NP_839375.1	CDS	hdeD	NC_004741.1	4139224	4139796	R	residues 1 to 190 of 190 are 85.78 pct identical to residues 1 to 190 of 190 from Escherichia coli K-12 : B3511; acid-resistance membrane protein	complement(4139224..4139796)	Shigella flexneri 2a str. 2457T	1080430
NP_839376.1	CDS	hdeA	NC_004741.1	4140051	4140383	D	inactive form; acid-resistance protein	4140051..4140383	Shigella flexneri 2a str. 2457T	1080431
NP_839377.1	CDS	hdeB	NC_004741.1	4140487	4140825	D	residues 1 to 112 of 112 are 100.00 pct identical to residues 1 to 112 of 112 from Escherichia coli K-12 : B3509; acid-resistance protein	4140487..4140825	Shigella flexneri 2a str. 2457T	1080432
NP_839378.1	CDS	yhiF	NC_004741.1	4141577	4142107	R	residues 1 to 176 of 176 are 98.86 pct identical to residues 1 to 176 of 176 from Escherichia coli K-12 : B3507; hypothetical protein	complement(4141577..4142107)	Shigella flexneri 2a str. 2457T	1080433
NP_839379.1	CDS	slp	NC_004741.1	4142263	4142862	R	residues 1 to 199 of 199 are 91.95 pct identical to residues 1 to 199 of 199 from Escherichia coli K-12 : B3506; outer membrane protein induced after carbon starvation	complement(4142263..4142862)	Shigella flexneri 2a str. 2457T	1080434
NP_839380.1	CDS	S4229	NC_004741.1	4144880	4145836	R	residues 51 to 317 of 318 are 35.18 pct identical to residues 20 to 274 of 274 from GenPept : >emb|CAB73548.1| (AL139079)  membrane protein [Campylobacter jejuni]; hypothetical protein	complement(4144880..4145836)	Shigella flexneri 2a str. 2457T	1080436
NP_839381.1	CDS	S4230	NC_004741.1	4145867	4146370	R	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri]; IS1 orfB	complement(4145867..4146370)	Shigella flexneri 2a str. 2457T	1080437
NP_839382.1	CDS	S4231	NC_004741.1	4146289	4146564	R	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(4146289..4146564)	Shigella flexneri 2a str. 2457T	1080438
NP_839383.1	CDS	arsR	NC_004741.1	4146620	4146964	D	regulates the expression of of the arsRBC involved in resistance to arsenic; DNA-binding transcriptional repressor ArsR	4146620..4146964	Shigella flexneri 2a str. 2457T	1080440
NP_839384.1	CDS	arsB	NC_004741.1	4147018	4148307	D	residues 1 to 429 of 429 are 89.51 pct identical to residues 8 to 436 of 436 from Escherichia coli K-12 : B3502; arsenical pump membrane protein	4147018..4148307	Shigella flexneri 2a str. 2457T	1080441
NP_839385.1	CDS	arsC	NC_004741.1	4148320	4148745	D	residues 1 to 141 of 141 are 100.00 pct identical to residues 1 to 141 of 141 from Escherichia coli K-12 : B3503; arsenate reductase	4148320..4148745	Shigella flexneri 2a str. 2457T	1080442
NP_839386.1	CDS	S4235	NC_004741.1	4148901	4149176	D	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfB	4148901..4149176	Shigella flexneri 2a str. 2457T	1080443
NP_839387.1	CDS	S4236	NC_004741.1	4149095	4149598	D	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri]; IS1 orfB	4149095..4149598	Shigella flexneri 2a str. 2457T	1080444
NP_839388.1	CDS	gor	NC_004741.1	4150511	4151863	R	catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense; glutathione reductase	complement(4150511..4151863)	Shigella flexneri 2a str. 2457T	1080445
NP_839389.1	CDS	yhiR	NC_004741.1	4151935	4152777	R	residues 1 to 280 of 280 are 98.57 pct identical to residues 1 to 280 of 280 from Escherichia coli K-12 : B3499; hypothetical protein	complement(4151935..4152777)	Shigella flexneri 2a str. 2457T	1080447
NP_839390.1	CDS	prlC	NC_004741.1	4152980	4155022	D	residues 1 to 680 of 680 are 96.02 pct identical to residues 1 to 680 of 680 from Escherichia coli K-12 : B3498; oligopeptidase A	4152980..4155022	Shigella flexneri 2a str. 2457T	1080414
NP_839391.1	CDS	yhiQ	NC_004741.1	4155030	4155782	D	predicted SAM-dependent methyltransferase; methyltransferase	4155030..4155782	Shigella flexneri 2a str. 2457T	1080448
NP_839392.1	CDS	uspA	NC_004741.1	4157618	4158052	R	residues 1 to 144 of 144 are 100.00 pct identical to residues 1 to 144 of 144 from Escherichia coli K-12 : B3495; broad regulatory function; universal stress protein	complement(4157618..4158052)	Shigella flexneri 2a str. 2457T	1080451
NP_839393.1	CDS	yhiO	NC_004741.1	4158446	4158781	D	ppGpp-dependent, membrane associated, stress protein produced under conditions of nutrient deprivation, osmotic shock and oxidative stress; universal stress protein UspB	4158446..4158781	Shigella flexneri 2a str. 2457T	1080452
NP_839394.1	CDS	pitA	NC_004741.1	4158852	4160351	R	residues 26 to 499 of 499 are 96.41 pct identical to residues 26 to 499 of 499 from Escherichia coli K-12 : B3493; low-affinity phosphate transport protein	complement(4158852..4160351)	Shigella flexneri 2a str. 2457T	1080453
NP_839395.1	CDS	yhiN	NC_004741.1	4160583	4161782	D	residues 1 to 394 of 399 are 94.41 pct identical to residues 1 to 394 of 400 from Escherichia coli K-12 : B3492; hypothetical protein	4160583..4161782	Shigella flexneri 2a str. 2457T	1078409
NP_839396.1	CDS	S4246	NC_004741.1	4162311	4162586	D	residues 1 to 91 of 91 are 98.90 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	4162311..4162586	Shigella flexneri 2a str. 2457T	1080454
NP_839397.1	CDS	S4247	NC_004741.1	4162505	4163008	D	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri]; IS1 orfB	4162505..4163008	Shigella flexneri 2a str. 2457T	1080457
NP_839398.1	CDS	S4248	NC_004741.1	4163019	4163318	R	residues 1 to 98 of 99 are 100.00 pct identical to residues 1 to 98 of 100 from GenPept : >gb|AAL72452.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS600 orfA	complement(4163019..4163318)	Shigella flexneri 2a str. 2457T	1080458
NP_839399.1	CDS	S4249	NC_004741.1	4163583	4164608	D	residues 1 to 334 of 341 are 22.65 pct identical to residues 229 to 570 of 597 from GenPept : >gb|AAF93566.1| (AE004127) hypothetical protein [Vibrio cholerae]; hypothetical protein	4163583..4164608	Shigella flexneri 2a str. 2457T	1080459
NP_839400.1	CDS	S4250	NC_004741.1	4166011	4166571	D	residues 1 to 177 of 186 are 47.54 pct identical to residues 59 to 239 of 241 from GenPept : >gb|AAD26595.1| (AF012835) chaperone protein AafD [Escherichia coli]; chaperone	4166011..4166571	Shigella flexneri 2a str. 2457T	1080461
NP_839401.1	CDS	S4254	NC_004741.1	4166615	4167694	D	residues 20 to 356 of 359 are 41.78 pct identical to residues 29 to 375 of 856 from NRprotein_Feb2003 : >gb|AAD27810.1|AF114828_2 aggregative adherence fimbria II usher protein AafC [Escherichia coli]; similar to several fimbrial proteins; fimbrial protein remnant	4166615..4167694	Shigella flexneri 2a str. 2457T	1078396
NP_839402.2	CDS	S4252	NC_004741.1	4167949	4168854	R	IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats; insertion element IS2 transposase InsD	complement(4167949..4168854)	Shigella flexneri 2a str. 2457T	1080462
NP_839403.2	CDS	S4253	NC_004741.1	4168812	4169177	R	IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats; insertion sequence 2 OrfA protein	complement(4168812..4169177)	Shigella flexneri 2a str. 2457T	1076438
NP_839404.1	CDS	S4255	NC_004741.1	4170556	4171068	D	no significant similarities; hypothetical protein	4170556..4171068	Shigella flexneri 2a str. 2457T	1080463
NP_839405.1	CDS	S4836	NC_004741.1	4171175	4171936	R	residues 1 to 253 of 253 are 100.00 pct identical to residues 1 to 253 of 253 from NRprotein_Feb03 : >ref|NP_709260.1| orf, hypothetical protein [Shigella flexneri 2a str. 301] gb|AAN44967.1|AE015359_3 orf, hypothetical protein [Shigella flexneri 2a str. 301]; similar to response regulators; hypothetical protein	complement(4171175..4171936)	Shigella flexneri 2a str. 2457T	1080464
NP_839406.1	CDS	S4837	NC_004741.1	4172182	4172946	D	residues 1 to 254 of 254 are 100.00 pct identical to residues 1 to 254 of 254 from NRprotein_Feb03 : >ref|NP_709259.1| orf, partial conserved hypothetical protein [Shigella flexneri 2a str. 301] gb|AAN44966.1|AE015359_2 orf, partial conserved hypothetical protein [Shigella flexneri 2a str. 301]; hypothetical protein	4172182..4172946	Shigella flexneri 2a str. 2457T	1080465
NP_839407.1	CDS	S4838	NC_004741.1	4172900	4173415	D	residues 1 to 171 of 171 are 100.00 pct identical to residues 1 to 171 of 171 from NRprotein_Feb03 : >ref|NP_709258.1| orf, hypothetical protein [Shigella flexneri 2a str. 301] gb|AAN44965.1|AE015359_1 orf, hypothetical protein [Shigella flexneri 2a str. 301]; hypothetical protein	4172900..4173415	Shigella flexneri 2a str. 2457T	1080466
NP_839408.1	CDS	yhiJ	NC_004741.1	4176769	4178391	D	residues 1 to 540 of 540 are 97.22 pct identical to residues 1 to 540 of 540 from Escherichia coli K-12 : B3488; hypothetical protein	4176769..4178391	Shigella flexneri 2a str. 2457T	1080470
NP_839409.1	CDS	yhiI	NC_004741.1	4178757	4179824	D	residues 1 to 355 of 355 are 80.00 pct identical to residues 1 to 355 of 355 from Escherichia coli K-12 : B3487; hypothetical protein	4178757..4179824	Shigella flexneri 2a str. 2457T	1080471
NP_839410.1	CDS	yhiH	NC_004741.1	4179821	4182556	D	residues 18 to 911 of 911 are 94.63 pct identical to residues 1 to 894 of 894 from Escherichia coli K-12 : B3486; ATP-binding component of a transport system	4179821..4182556	Shigella flexneri 2a str. 2457T	1080472
NP_839411.1	CDS	yhhJ	NC_004741.1	4182556	4183680	D	residues 1 to 374 of 374 are 88.77 pct identical to residues 2 to 375 of 375 from Escherichia coli K-12 : B3485; transporter	4182556..4183680	Shigella flexneri 2a str. 2457T	1080473
NP_839412.1	CDS	S4263	NC_004741.1	4184011	4184370	D	residues 1 to 119 of 119 are 99.15 pct identical to residues 1 to 119 of 119 from GenPept : >gb|AAG58616.1|AE005572_14 (AE005572) Z4882 gene product [Escherichia coli O157:H7 EDL933]; hypothetical protein	4184011..4184370	Shigella flexneri 2a str. 2457T	1080474
NP_839413.1	CDS	yhhG	NC_004741.1	4184490	4184891	R	Inhibits transcription at high concentrations of nickel; nickel responsive regulator	complement(4184490..4184891)	Shigella flexneri 2a str. 2457T	1080475
NP_839414.1	CDS	nikE	NC_004741.1	4184897	4185703	R	with NikABCD is involved with nickel transport into the cell; nickel transporter ATP-binding protein NikE	complement(4184897..4185703)	Shigella flexneri 2a str. 2457T	1080476
NP_839415.1	CDS	nikD	NC_004741.1	4185700	4186464	R	with NikABCE is involved in nickel transport into the cell; nickel transporter ATP-binding protein NikD	complement(4185700..4186464)	Shigella flexneri 2a str. 2457T	1080477
NP_839416.1	CDS	nikC	NC_004741.1	4186464	4187297	R	with NikABDE is involved in nickel transport into the cell; nickel transporter permease NikC	complement(4186464..4187297)	Shigella flexneri 2a str. 2457T	1080478
NP_839417.1	CDS	nikB	NC_004741.1	4187294	4188238	R	with NikACDE is involved in nickel transport into the cell; nickel transporter permease NikB	complement(4187294..4188238)	Shigella flexneri 2a str. 2457T	1079684
NP_839418.1	CDS	nikA	NC_004741.1	4188238	4189812	R	residues 1 to 524 of 524 are 99.42 pct identical to residues 1 to 524 of 524 from Escherichia coli K-12 : B3476; periplasmic binding protein for nickel	complement(4188238..4189812)	Shigella flexneri 2a str. 2457T	1080480
NP_839419.1	CDS	yhhU	NC_004741.1	4189923	4190510	R	residues 1 to 195 of 195 are 98.46 pct identical to residues 1 to 195 of 195 from Escherichia coli K-12 : B3475; holo-(acyl carrier protein) synthase 2	complement(4189923..4190510)	Shigella flexneri 2a str. 2457T	1080481
NP_839420.1	CDS	yhhT	NC_004741.1	4190565	4191614	R	residues 1 to 349 of 349 are 95.98 pct identical to residues 28 to 376 of 376 from Escherichia coli K-12 : B3474; hypothetical protein	complement(4190565..4191614)	Shigella flexneri 2a str. 2457T	1077976
NP_839421.2	CDS	yhhS	NC_004741.1	4191748	4192965	D	residues 30 to 387 of 419 are 37.70 pct identical to residues 14 to 371 of 392 from Escherichia coli K-12 : B2322; major facilitator superfamily transporter	4191748..4192965	Shigella flexneri 2a str. 2457T	1080482
NP_839422.2	CDS	S4273	NC_004741.1	4192969	4193526	R	residues 1 to 203 of 203 are 100.00 pct identical to residues 1 to 203 of 203 from Escherichia coli K-12 : B3472; hypothetical protein	complement(4192969..4193526)	Shigella flexneri 2a str. 2457T	1080483
NP_839423.1	CDS	yhhQ	NC_004741.1	4193599	4194264	R	residues 1 to 221 of 221 are 99.54 pct identical to residues 1 to 221 of 221 from Escherichia coli K-12 : B3471; hypothetical protein	complement(4193599..4194264)	Shigella flexneri 2a str. 2457T	1080484
NP_839424.1	CDS	yhhP	NC_004741.1	4194485	4194730	D	TusA; transfers sulfur to TusBCD complex; involved in thiouridation of U34 position of some tRNAs; sulfur transfer protein SirA	4194485..4194730	Shigella flexneri 2a str. 2457T	1078182
NP_839425.1	CDS	zntA	NC_004741.1	4194832	4197030	R	P-type ATPase involved in the export of lead, cadmium, zinc and mercury; zinc/cadmium/mercury/lead-transporting ATPase	complement(4194832..4197030)	Shigella flexneri 2a str. 2457T	1080485
NP_839426.1	CDS	yhhN	NC_004741.1	4197104	4197730	R	residues 1 to 208 of 208 are 88.46 pct identical to residues 1 to 208 of 208 from Escherichia coli K-12 : B3468; enzyme	complement(4197104..4197730)	Shigella flexneri 2a str. 2457T	1080486
NP_839427.1	CDS	yhhM	NC_004741.1	4197871	4198230	D	residues 1 to 119 of 119 are 89.07 pct identical to residues 1 to 119 of 119 from Escherichia coli K-12 : B3467; receptor	4197871..4198230	Shigella flexneri 2a str. 2457T	1080487
NP_839428.1	CDS	yhhL	NC_004741.1	4198233	4198502	R	residues 1 to 89 of 89 are 98.87 pct identical to residues 1 to 89 of 89 from Escherichia coli K-12 : B3466; hypothetical protein	complement(4198233..4198502)	Shigella flexneri 2a str. 2457T	1080488
NP_839429.1	CDS	rsmD	NC_004741.1	4198492	4199088	R	catalyzes the methylation of 16S rRNA at position G966; 16S rRNA m(2)G966-methyltransferase	complement(4198492..4199088)	Shigella flexneri 2a str. 2457T	1077575
NP_839430.1	CDS	ftsY	NC_004741.1	4199238	4200734	D	signal recognition protein receptor; functions in the targeting and insertion of membrane proteins; cell division protein FtsY	4199238..4200734	Shigella flexneri 2a str. 2457T	1080489
NP_839431.1	CDS	ftsE	NC_004741.1	4200737	4201405	D	ATP-binding protein of an ATP-binding cassette transporter; when bound to FtsX, FtsEX localizes to the cell division site and plays a role in the assembly or stability of the septal ring under low-salt growth conditions; cell division protein FtsE	4200737..4201405	Shigella flexneri 2a str. 2457T	1080490
NP_839432.1	CDS	ftsX	NC_004741.1	4201398	4202456	D	ABC transporter membrane protein; cell division protein FtsX	4201398..4202456	Shigella flexneri 2a str. 2457T	1080491
NP_839433.1	CDS	rpoH	NC_004741.1	4202701	4203555	D	binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32	4202701..4203555	Shigella flexneri 2a str. 2457T	1080492
NP_839434.1	CDS	livJ	NC_004741.1	4203769	4204929	D	residues 1 to 386 of 386 are 97.15 pct identical to residues 1 to 386 of 386 from Escherichia coli K-12 : B3460; high-affinity amino acid transport protein, periplasmic binding protein	4203769..4204929	Shigella flexneri 2a str. 2457T	1080493
NP_839435.1	CDS	yhhK	NC_004741.1	4205128	4205511	R	residues 1 to 126 of 127 are 89.68 pct identical to residues 1 to 126 of 127 from Escherichia coli K-12 : B3459; hypothetical protein	complement(4205128..4205511)	Shigella flexneri 2a str. 2457T	1078285
NP_839436.1	CDS	livK	NC_004741.1	4205935	4207044	D	residues 1 to 369 of 369 are 99.72 pct identical to residues 1 to 369 of 369 from Escherichia coli K-12 : B3458; high-affinity leucine-specific transport protein, periplasmic binding protein	4205935..4207044	Shigella flexneri 2a str. 2457T	1080494
NP_839437.1	CDS	livH	NC_004741.1	4207092	4208018	D	LivHMGF is the membrane component of the LIV-I/LS branched-chain amino acid transporter; branched-chain amino acid ABC transporter permease	4207092..4208018	Shigella flexneri 2a str. 2457T	1076553
NP_839438.1	CDS	livM	NC_004741.1	4208015	4209292	D	Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; leucine/isoleucine/valine transporter permease subunit	4208015..4209292	Shigella flexneri 2a str. 2457T	1080495
NP_839439.1	CDS	livG	NC_004741.1	4209289	4210056	D	Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; leucine/isoleucine/valine transporter ATP-binding subunit	4209289..4210056	Shigella flexneri 2a str. 2457T	1080496
NP_839440.1	CDS	livF	NC_004741.1	4210058	4210771	D	with LivGHMJ and LivGHMK is part of the high-affinity branched-chain amino acid transport system; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; leucine/isoleucine/valine transporter ATP-binding subunit	4210058..4210771	Shigella flexneri 2a str. 2457T	1080497
NP_839441.1	CDS	ugpB	NC_004741.1	4211168	4212484	D	with UgpACE is involved in the uptake of glycerol-3-phosphate; glycerol-3-phosphate transporter periplasmic binding protein	4211168..4212484	Shigella flexneri 2a str. 2457T	1080498
NP_839442.1	CDS	ugpA	NC_004741.1	4212582	4213469	D	with UgpEC is involved in the uptake of glycerol-3-phosphate; glycerol-3-phosphate transporter permease	4212582..4213469	Shigella flexneri 2a str. 2457T	1080499
NP_839443.1	CDS	ugpE	NC_004741.1	4213466	4214311	D	with UgpABC is involved in uptake of glycerol-3-phosphate; glycerol-3-phosphate transporter membrane protein	4213466..4214311	Shigella flexneri 2a str. 2457T	1080500
NP_839444.1	CDS	ugpQ	NC_004741.1	4215300	4216043	D	hydrolyzes diesters during transport at the inner face of the cytoplasmic membrane to glycerol-3-phosphate and alcohol; induced when cells are starved for inorganic phosphate; glycerophosphodiester phosphodiesterase	4215300..4216043	Shigella flexneri 2a str. 2457T	1080502
NP_839445.1	CDS	yhhA	NC_004741.1	4216030	4216470	R	residues 1 to 146 of 146 are 71.23 pct identical to residues 1 to 146 of 146 from Escherichia coli K-12 : B3448; hypothetical protein	complement(4216030..4216470)	Shigella flexneri 2a str. 2457T	1080504
NP_839446.1	CDS	ggt	NC_004741.1	4216590	4218332	D	periplasmic enzyme; post-translationally processed into two subunits which are required for wild-type enzyme activity; cleaves the gammaglutamyl linkages of compounds such as glutathione and transfer the gammaglutamyl group to other amino acids and peptides; gamma-glutamyltranspeptidase	4216590..4218332	Shigella flexneri 2a str. 2457T	1080506
NP_839447.1	CDS	yhhY	NC_004741.1	4218391	4218879	R	YhhY; regulated by the fur regulator; unknown function; acetyltransferase YhhY	complement(4218391..4218879)	Shigella flexneri 2a str. 2457T	1080507
NP_839448.1	CDS	yhhX	NC_004741.1	4219212	4220249	D	residues 1 to 344 of 345 are 99.70 pct identical to residues 1 to 344 of 345 from Escherichia coli K-12 : B3440; dehydrogenase	4219212..4220249	Shigella flexneri 2a str. 2457T	1080508
NP_839449.1	CDS	yhhW	NC_004741.1	4220372	4221067	D	residues 1 to 231 of 231 are 99.56 pct identical to residues 1 to 231 of 231 from Escherichia coli K-12 : B3439; hypothetical protein	4220372..4221067	Shigella flexneri 2a str. 2457T	1080509
NP_839450.1	CDS	gntR	NC_004741.1	4221348	4222286	D	residues 1 to 285 of 312 are 97.54 pct identical to residues 20 to 304 of 313 from Escherichia coli K-12 : B3438; regulator of gluconate (gnt) operon	4221348..4222286	Shigella flexneri 2a str. 2457T	1080510
NP_839451.2	CDS	gntK	NC_004741.1	4222425	4222952	D	thermoresistant; catalyzes the formation of 6-phospho-D-gluconate from gluconate; gluconate kinase	4222425..4222952	Shigella flexneri 2a str. 2457T	1078250
NP_839452.1	CDS	gntU	NC_004741.1	4223019	4224296	D	residues 1 to 425 of 425 are 99.52 pct identical to residues 22 to 446 of 446 from NRprotein_Feb2003 : >ref|NP_289984.1| low-affinity gluconate permease [Escherichia coli O157:H7 EDL933]  ref|NP_417893.1| H+/gluconate symporter [Escherichia coli K12] sp|P46858|GNTU_ECOLI Low-affinity gluconate transporter (Gluconate permease)[Escherichia coli]; low affinity gluconate transporter	4223019..4224296	Shigella flexneri 2a str. 2457T	1080511
NP_839453.1	CDS	yhgN	NC_004741.1	4224353	4224946	R	YhgN; Ec0197; hydrolyzes nucleoside triphosphates with an O6 atom-containing purine base to nucleoside monophosphate and pyrophosphate; seems to play a role in the elimination of aberrant purine-derived nucleotides containing the 6-keto group; shows preference for deoxyinosine triphosphate and xanthosine triphosphate over standard nucleoside triphosphates (dATP, dCTP, dGTP, and dTTP); dITP- and XTP- hydrolase	complement(4224353..4224946)	Shigella flexneri 2a str. 2457T	1080512
NP_839454.1	CDS	asd	NC_004741.1	4225138	4226241	D	catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase	4225138..4226241	Shigella flexneri 2a str. 2457T	1080513
NP_839455.1	CDS	glgB	NC_004741.1	4226514	4228700	D	catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching enzyme	4226514..4228700	Shigella flexneri 2a str. 2457T	1080514
NP_839456.1	CDS	glgX	NC_004741.1	4228697	4230670	D	catalyzes the hydrolysis of the alpha-1,6-glucosidic linkages in partially depolymerized glycogen; glycogen debranching enzyme	4228697..4230670	Shigella flexneri 2a str. 2457T	1080515
NP_839457.1	CDS	glgC	NC_004741.1	4230688	4231983	D	catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate; glucose-1-phosphate adenylyltransferase	4230688..4231983	Shigella flexneri 2a str. 2457T	1080516
NP_839458.1	CDS	glgA	NC_004741.1	4231983	4233416	D	catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose; glycogen synthase	4231983..4233416	Shigella flexneri 2a str. 2457T	1080517
NP_839459.1	CDS	glgP	NC_004741.1	4233435	4235882	D	residues 1 to 815 of 815 are 97.30 pct identical to residues 1 to 815 of 815 from Escherichia coli K-12 : B3428; glycogen phosphorylase	4233435..4235882	Shigella flexneri 2a str. 2457T	1080518
NP_839460.1	CDS	S4313	NC_004741.1	4236000	4236866	D	residues 1 to 284 of 288 are 98.94 pct identical to residues 7 to 290 of 439 from GenPept : >gb|AAK18553.1|AF348706_242 (AF348706) IS4 orf [Shigella flexneri]; IS4 orf	4236000..4236866	Shigella flexneri 2a str. 2457T	1080519
NP_839461.1	CDS	S4314	NC_004741.1	4236872	4237327	D	residues 1 to 151 of 151 are 99.33 pct identical to residues 298 to 448 of 448 from GenPept : >gb|AAK18333.1|AF348706_22 (AF348706) IS4 orf [Shigella flexneri]; IS4 orf	4236872..4237327	Shigella flexneri 2a str. 2457T	1080520
NP_839462.1	CDS	glpD	NC_004741.1	4237934	4239412	R	in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; glycerol-3-phosphate dehydrogenase	complement(4237934..4239412)	Shigella flexneri 2a str. 2457T	1080522
NP_839463.1	CDS	glpE	NC_004741.1	4239630	4239956	D	belongs to rhodanese family; thiosulfate thiotransferase; in Escherichia coli this enzyme catalyzes the formation of thiocyanate from thiosulfate and cyanide with low efficiency; contains an active site cysteine; thiosulfate sulfurtransferase	4239630..4239956	Shigella flexneri 2a str. 2457T	1080921
NP_839464.1	CDS	glpG	NC_004741.1	4240007	4240831	D	protease responsible for the cleavage between Ser and Asp residues of proteins in regions of high local hydrophilicity; intramembrane serine protease GlpG	4240007..4240831	Shigella flexneri 2a str. 2457T	1080967
NP_839465.1	CDS	glpR	NC_004741.1	4240848	4241606	D	represses the glpD, glpFK, glpTQ, and glpACB operons involved in glycerol-3-phosphate metabolism; DNA-binding transcriptional repressor GlpR	4240848..4241606	Shigella flexneri 2a str. 2457T	1080523
NP_839466.1	CDS	rtcR	NC_004741.1	4241588	4243186	R	residues 1 to 532 of 532 are 98.68 pct identical to residues 1 to 532 of 532 from Escherichia coli K-12 : B3422; 2-component regulator	complement(4241588..4243186)	Shigella flexneri 2a str. 2457T	1080524
NP_839467.1	CDS	rtcB	NC_004741.1	4243367	4244593	D	residues 1 to 408 of 408 are 98.28 pct identical to residues 1 to 408 of 408 from Escherichia coli K-12 : B3421; hypothetical protein	4243367..4244593	Shigella flexneri 2a str. 2457T	1080525
NP_839468.1	CDS	yhgJ	NC_004741.1	4245008	4245613	D	catalyzes the conversion of terminal3'-phosphate of RNA to the 2',3'-cyclicphosphodiester; RNA 3'-terminal-phosphate cyclase	4245008..4245613	Shigella flexneri 2a str. 2457T	1080527
NP_839469.1	CDS	malP	NC_004741.1	4248973	4251366	D	residues 1 to 797 of 797 are 94.47 pct identical to residues 1 to 797 of 797 from Escherichia coli K-12 : B3417; maltodextrin phosphorylase	4248973..4251366	Shigella flexneri 2a str. 2457T	1080529
NP_839470.1	CDS	malQ	NC_004741.1	4251376	4253460	D	amylomaltase; acts to release glucose from maltodextrins; 4-alpha-glucanotransferase	4251376..4253460	Shigella flexneri 2a str. 2457T	1080530
NP_839471.1	CDS	gntT	NC_004741.1	4253505	4254821	R	residues 17 to 438 of 438 are 88.38 pct identical to residues 17 to 437 of 437 from Escherichia coli K-12 : B3415; high-affinity transport permease for gluconate	complement(4253505..4254821)	Shigella flexneri 2a str. 2457T	1080532
NP_839472.1	CDS	yhgI	NC_004741.1	4255182	4255757	R	cytoplasmic protein that may be involved in the utilization of double-stranded DNA as a carbon source; DNA uptake protein	complement(4255182..4255757)	Shigella flexneri 2a str. 2457T	1080533
NP_839473.2	CDS	yhgH	NC_004741.1	4255816	4256499	R	involved in high-affinity gluconate transport; gluconate periplasmic binding protein	complement(4255816..4256499)	Shigella flexneri 2a str. 2457T	1080534
NP_839474.1	CDS	bioH	NC_004741.1	4256537	4257325	D	Shows carboxylesterase activity with a preference for short chain fatty acid esters; involved in pimeloyl-CoA synthesis; carboxylesterase BioH	4256537..4257325	Shigella flexneri 2a str. 2457T	1080535
NP_839475.2	CDS	S4331	NC_004741.1	4258051	4258956	R	IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats; insertion element IS2 transposase InsD	complement(4258051..4258956)	Shigella flexneri 2a str. 2457T	1080536
NP_839476.2	CDS	S4332	NC_004741.1	4258914	4259279	R	IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats; insertion sequence 2 OrfA protein	complement(4258914..4259279)	Shigella flexneri 2a str. 2457T	1080537
NP_839477.1	CDS	yhgA	NC_004741.1	4259355	4260242	R	residues 1 to 281 of 295 are 99.28 pct identical to residues 1 to 281 of 292 from Escherichia coli K-12 : B3411; hypothetical protein	complement(4259355..4260242)	Shigella flexneri 2a str. 2457T	1080538
NP_839478.1	CDS	yhgG	NC_004741.1	4260445	4260681	R	residues 1 to 78 of 78 are 98.71 pct identical to residues 1 to 78 of 78 from Escherichia coli K-12 : B3410; hypothetical protein	complement(4260445..4260681)	Shigella flexneri 2a str. 2457T	1080539
NP_839479.1	CDS	feoB	NC_004741.1	4260681	4263002	R	cytoplasmic membrane ferrous uptake system permease; mutations disrupt the ability of Escherichia coli to take up ferrous iron; GTP-binding protein which requires GTP for efficient iron(II) uptake; ferrous iron transport protein B	complement(4260681..4263002)	Shigella flexneri 2a str. 2457T	1080540
NP_839480.1	CDS	feoA	NC_004741.1	4263019	4263246	R	residues 1 to 75 of 75 are 98.66 pct identical to residues 1 to 75 of 75 from Escherichia coli K-12 : B3408; ferrous iron transport protein A	complement(4263019..4263246)	Shigella flexneri 2a str. 2457T	1080541
NP_839481.1	CDS	yhgF	NC_004741.1	4263684	4265906	R	residues 1 to 740 of 740 are 97.56 pct identical to residues 1 to 740 of 740 from Escherichia coli K-12 : B3407; hypothetical protein	complement(4263684..4265906)	Shigella flexneri 2a str. 2457T	1080542
NP_839482.2	CDS	greB	NC_004741.1	4266102	4266578	R	necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreB	complement(4266102..4266578)	Shigella flexneri 2a str. 2457T	1080543
NP_839483.1	CDS	ompR	NC_004741.1	4266806	4267525	D	part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of ompF; also functions in regulation of other genes; forms dimers upon phosphorylation; osmolarity response regulator	4266806..4267525	Shigella flexneri 2a str. 2457T	1080544
NP_839484.1	CDS	envZ	NC_004741.1	4267522	4268874	D	membrane-localized osmosensor; histidine kinase; in high osmolarity EnvZ autophosphorylates itself and transfers phosphoryl group to OmpR; osmolarity sensor protein	4267522..4268874	Shigella flexneri 2a str. 2457T	1080545
NP_839485.1	CDS	pckA	NC_004741.1	4268950	4270572	R	PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase	complement(4268950..4270572)	Shigella flexneri 2a str. 2457T	1080546
NP_839486.1	CDS	yhgE	NC_004741.1	4270951	4272702	D	residues 1 to 583 of 583 are 79.24 pct identical to residues 1 to 574 of 574 from Escherichia coli K-12 : B3402; transporter	4270951..4272702	Shigella flexneri 2a str. 2457T	1080547
NP_839487.1	CDS	hslO	NC_004741.1	4272846	4273715	R	becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers; Hsp33-like chaperonin	complement(4272846..4273715)	Shigella flexneri 2a str. 2457T	1080548
NP_839488.1	CDS	yrfH	NC_004741.1	4273740	4274141	R	residues 1 to 133 of 133 are 87.96 pct identical to residues 1 to 133 of 133 from Escherichia coli K-12 : B3400; ribosome-associated heat shock protein Hsp15	complement(4273740..4274141)	Shigella flexneri 2a str. 2457T	1080550
NP_839489.1	CDS	yrfG	NC_004741.1	4274152	4274865	R	residues 1 to 237 of 237 are 100.00 pct identical to residues 1 to 237 of 237 from Escherichia coli K-12 : B3399; phosphatase	complement(4274152..4274865)	Shigella flexneri 2a str. 2457T	1080551
NP_839490.1	CDS	yrfF	NC_004741.1	4274885	4277020	R	residues 1 to 711 of 711 are 93.81 pct identical to residues 1 to 711 of 711 from Escherichia coli K-12 : B3398; dehydrogenase	complement(4274885..4277020)	Shigella flexneri 2a str. 2457T	1080552
NP_839491.1	CDS	nudE	NC_004741.1	4277340	4277900	D	ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose; ADP-ribose diphosphatase NudE	4277340..4277900	Shigella flexneri 2a str. 2457T	1079335
NP_839492.3	CDS	mrcA	NC_004741.1	4278065	4280617	R	bifunctional murein transglycosylase/murein transpeptidase; penicillin-binding protein 1A; involved in the synthesis of cross-linked peptidoglycan from the lipid intermediates in cell wall formation; penicillin-insensitive transglycosylase catalyzes the formation of linear glycan strands and the penicillin-sensitive transpeptidase catalyzes the cross-linking of the peptide subunits; peptidoglycan synthetase	complement(4278065..4280617)	Shigella flexneri 2a str. 2457T	1080554
NP_839493.1	CDS	yrfD	NC_004741.1	4280710	4281516	D	residues 1 to 268 of 268 are 93.28 pct identical to residues 1 to 268 of 268 from Escherichia coli K-12 : B3395; hypothetical protein	4280710..4281516	Shigella flexneri 2a str. 2457T	1080556
NP_839494.1	CDS	yrfC	NC_004741.1	4281516	4282055	D	residues 1 to 179 of 179 are 80.44 pct identical to residues 1 to 179 of 179 from Escherichia coli K-12 : B3394; hypothetical protein	4281516..4282055	Shigella flexneri 2a str. 2457T	1080557
NP_839495.1	CDS	yrfB	NC_004741.1	4282039	4282479	D	residues 1 to 146 of 146 are 97.94 pct identical to residues 1 to 146 of 146 from Escherichia coli K-12 : B3393; hypothetical protein	4282039..4282479	Shigella flexneri 2a str. 2457T	1080559
NP_839496.1	CDS	hofQ	NC_004741.1	4282787	4284025	D	outer membrane porin probably involved in uptake of extracellular double-stranded DNA; similar to outer membrane competence protein ComE from Haemophilus influenzae and outer membrane protein PilQ involved in type IV pilus production from Pseudomonas aeruginosa; outer membrane porin HofQ	4282787..4284025	Shigella flexneri 2a str. 2457T	1080561
NP_839497.2	CDS	aroK	NC_004741.1	4284426	4284947	D	type I enzyme similar to type II but differentially regulated; major shikimate kinase in fully repressed cells; catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase I	4284426..4284947	Shigella flexneri 2a str. 2457T	1080562
NP_839498.1	CDS	aroB	NC_004741.1	4285004	4286092	D	catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase	4285004..4286092	Shigella flexneri 2a str. 2457T	1079948
NP_839499.1	CDS	damX	NC_004741.1	4286184	4287476	D	residues 1 to 430 of 430 are 61.39 pct identical to residues 1 to 428 of 428 from Escherichia coli K-12 : B3388; interferes with cell division; hypothetical protein	4286184..4287476	Shigella flexneri 2a str. 2457T	1080563
NP_839500.1	CDS	dam	NC_004741.1	4287583	4288419	D	residues 1 to 278 of 278 are 99.64 pct identical to residues 1 to 278 of 278 from Escherichia coli K-12 : B3387; DNA adenine methylase	4287583..4288419	Shigella flexneri 2a str. 2457T	1076430
NP_839501.1	CDS	rpe	NC_004741.1	4288437	4289114	D	catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate; ribulose-phosphate 3-epimerase	4288437..4289114	Shigella flexneri 2a str. 2457T	1080564
NP_839502.1	CDS	gph	NC_004741.1	4289107	4289865	D	catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate; phosphoglycolate phosphatase	4289107..4289865	Shigella flexneri 2a str. 2457T	1080565
NP_839503.1	CDS	trpS	NC_004741.1	4289858	4290862	D	catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase	4289858..4290862	Shigella flexneri 2a str. 2457T	1080566
NP_839504.1	CDS	yhfZ	NC_004741.1	4291351	4292037	D	residues 1 to 228 of 228 are 96.49 pct identical to residues 1 to 228 of 228 from Escherichia coli K-12 : B3383; hypothetical protein	4291351..4292037	Shigella flexneri 2a str. 2457T	1080567
NP_839505.1	CDS	yhfY	NC_004741.1	4292012	4292416	D	residues 1 to 134 of 134 are 96.26 pct identical to residues 1 to 134 of 134 from Escherichia coli K-12 : B3382; hypothetical protein	4292012..4292416	Shigella flexneri 2a str. 2457T	1080568
NP_839506.1	CDS	yhfX	NC_004741.1	4292500	4293663	D	residues 1 to 387 of 387 are 91.47 pct identical to residues 1 to 387 of 387 from Escherichia coli K-12 : B3381; hypothetical protein	4292500..4293663	Shigella flexneri 2a str. 2457T	1080570
NP_839507.1	CDS	yhfW	NC_004741.1	4293664	4294890	D	catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose; mutase	4293664..4294890	Shigella flexneri 2a str. 2457T	1080571
NP_839508.1	CDS	yhfV	NC_004741.1	4294887	4295765	D	phosphotriesterase homology protein; PhP; YhfV; member of a family of proteins related to phosphotriesterase (PTE); hydrolase	4294887..4295765	Shigella flexneri 2a str. 2457T	1080572
NP_839509.1	CDS	yhfU	NC_004741.1	4295737	4296129	D	residues 1 to 130 of 130 are 100.00 pct identical to residues 1 to 130 of 130 from Escherichia coli K-12 : B3378; hypothetical protein	4295737..4296129	Shigella flexneri 2a str. 2457T	1080573
NP_839510.1	CDS	yhfT	NC_004741.1	4296141	4297445	D	residues 1 to 434 of 434 are 93.08 pct identical to residues 1 to 434 of 434 from Escherichia coli K-12 : B3377; transport system permease	4296141..4297445	Shigella flexneri 2a str. 2457T	1080574
NP_839511.1	CDS	yhfS	NC_004741.1	4297457	4298542	D	residues 1 to 361 of 361 are 86.70 pct identical to residues 1 to 361 of 361 from Escherichia coli K-12 : B3376; hypothetical protein	4297457..4298542	Shigella flexneri 2a str. 2457T	1080575
NP_839512.1	CDS	yhfR	NC_004741.1	4298702	4299499	R	may act as a transcriptional regulator of a fructoselysine-induced operon containing the yhfM, yhfN, yhfO, yhfP, yhfQ, and yhfR genes; DNA-binding transcriptional regulator FrlR	complement(4298702..4299499)	Shigella flexneri 2a str. 2457T	1080577
NP_839513.1	CDS	yhfQ	NC_004741.1	4299533	4300318	R	residues 1 to 261 of 261 are 99.23 pct identical to residues 1 to 261 of 261 from Escherichia coli K-12 : B3374; fructoselysine 6-kinase	complement(4299533..4300318)	Shigella flexneri 2a str. 2457T	1080578
NP_839514.1	CDS	yhfP	NC_004741.1	4300315	4301145	R	YhfOP; YhfP; YhfO; FrlC; catalyzes the interconversion of fructoselysine and psicoselysine; fructoselysine 3-epimerase	complement(4300315..4301145)	Shigella flexneri 2a str. 2457T	1080579
NP_839515.2	CDS	frlB	NC_004741.1	4301195	4302238	R	catalyzes the conversion of fructoselysine 6-phosphate to glucose 6-phosphate and lysine; fructoselysine-6-P-deglycase	complement(4301195..4302238)	Shigella flexneri 2a str. 2457T	1080581
NP_839516.1	CDS	yhfL	NC_004741.1	4303870	4304037	R	residues 1 to 55 of 55 are 70.90 pct identical to residues 1 to 55 of 55 from Escherichia coli K-12 : B3369; hypothetical protein	complement(4303870..4304037)	Shigella flexneri 2a str. 2457T	1080583
NP_839517.1	CDS	cysG	NC_004741.1	4304284	4305657	R	multifunction enzyme consisting of uroporphyrin-III C-methyltransferase, precorrin-2 dehydrogenase and sirohydrochlorin ferrochelatase; catalyzes the methylation of uroporphyrinogen III to form precorrin-2, then catalyzes formation of sirohydrochlorin from precorrin-2 and finally catalyzed the formation of siroheme from sirohydrochlorin; siroheme synthase	complement(4304284..4305657)	Shigella flexneri 2a str. 2457T	1080584
NP_839518.1	CDS	nirC	NC_004741.1	4305676	4306230	R	residues 1 to 184 of 184 are 100.00 pct identical to residues 1 to 184 of 184 from Escherichia coli K-12 : B3367; nitrite reductase, NirC protein	complement(4305676..4306230)	Shigella flexneri 2a str. 2457T	1080585
NP_839519.1	CDS	nirD	NC_004741.1	4306608	4306934	R	involved in reducing nitrite to ammonium to detoxify nitrite accumulation in anaerobic nitrate-respiring cells and regenerate NAD+; bounds to NirB, the cytoplasmic subunit, whose expression is induced at high nitrate concentrations; nitrite reductase small subunit	complement(4306608..4306934)	Shigella flexneri 2a str. 2457T	1080586
NP_839520.1	CDS	nirB	NC_004741.1	4306931	4309474	R	residues 1 to 847 of 847 are 97.87 pct identical to residues 1 to 847 of 847 from Escherichia coli K-12 : B3365; nitrite reductase (NAD(P)H) subunit	complement(4306931..4309474)	Shigella flexneri 2a str. 2457T	1080587
NP_839521.1	CDS	yhfC	NC_004741.1	4309736	4310917	R	residues 1 to 393 of 393 are 98.72 pct identical to residues 1 to 393 of 393 from Escherichia coli K-12 : B3364; hypothetical protein	complement(4309736..4310917)	Shigella flexneri 2a str. 2457T	1080588
NP_839522.1	CDS	ppiA	NC_004741.1	4311188	4311769	D	residues 29 to 193 of 193 are 100.00 pct identical to residues 26 to 190 of 190 from Escherichia coli K-12 : B3363; peptidyl-prolyl cis-trans isomerase A (rotamase A)	4311188..4311769	Shigella flexneri 2a str. 2457T	1080589
NP_839523.1	CDS	yhfG	NC_004741.1	4311874	4312041	D	residues 1 to 36 of 55 are 100.00 pct identical to residues 1 to 36 of 55 from Escherichia coli K-12 : B3362; hypothetical protein	4311874..4312041	Shigella flexneri 2a str. 2457T	1080590
NP_839524.1	CDS	fic	NC_004741.1	4312031	4312633	D	residues 1 to 200 of 200 are 92.50 pct identical to residues 1 to 200 of 200 from Escherichia coli K-12 : B3361; recognized by rpoS, affects cell division; cell filamentation protein Fic	4312031..4312633	Shigella flexneri 2a str. 2457T	1080591
NP_839525.1	CDS	pabA	NC_004741.1	4312665	4313228	D	aminodeoxychorismate synthase subunit PabA; with PabB catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine in para-aminobenzoate synthesis; PabA provides the glutamine amidotransferase activity; para-aminobenzoate synthase component II	4312665..4313228	Shigella flexneri 2a str. 2457T	1080592
NP_839526.1	CDS	argD	NC_004741.1	4313314	4314534	D	DapATase; bifunctional enzyme that functions in arginine and lysine biosynthetic pathways; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2,6-diaminoheptanedioate; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein	4313314..4314534	Shigella flexneri 2a str. 2457T	1080593
NP_839527.1	CDS	yhfK	NC_004741.1	4314601	4316691	R	residues 1 to 696 of 696 are 94.68 pct identical to residues 1 to 696 of 696 from Escherichia coli K-12 : B3358; hypothetical protein	complement(4314601..4316691)	Shigella flexneri 2a str. 2457T	1080594
NP_839528.1	CDS	crp	NC_004741.1	4316742	4317374	R	complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons; cAMP-regulatory protein	complement(4316742..4317374)	Shigella flexneri 2a str. 2457T	1080595
NP_839529.1	CDS	yhfA	NC_004741.1	4317676	4318080	D	residues 1 to 134 of 134 are 100.00 pct identical to residues 1 to 134 of 134 from Escherichia coli K-12 : B3356; hypothetical protein	4317676..4318080	Shigella flexneri 2a str. 2457T	1080596
NP_839530.1	CDS	prkB	NC_004741.1	4318135	4319004	R	residues 1 to 289 of 289 are 95.84 pct identical to residues 1 to 289 of 289 from Escherichia coli K-12 : B3355; phosphoribulokinase	complement(4318135..4319004)	Shigella flexneri 2a str. 2457T	1080597
NP_839531.1	CDS	yheU	NC_004741.1	4319058	4319276	R	residues 1 to 72 of 72 are 100.00 pct identical to residues 1 to 72 of 72 from Escherichia coli K-12 : B3354; hypothetical protein	complement(4319058..4319276)	Shigella flexneri 2a str. 2457T	1080598
NP_839532.1	CDS	yheT	NC_004741.1	4319270	4320292	R	residues 1 to 340 of 340 are 93.23 pct identical to residues 1 to 340 of 340 from Escherichia coli K-12 : B3353; hydrolase	complement(4319270..4320292)	Shigella flexneri 2a str. 2457T	1080599
NP_839533.1	CDS	yheS	NC_004741.1	4320292	4322205	R	residues 1 to 620 of 637 are 99.67 pct identical to residues 1 to 620 of 637 from Escherichia coli K-12 : B3352; ABC transporter ATP-binding protein	complement(4320292..4322205)	Shigella flexneri 2a str. 2457T	1080600
NP_839534.1	CDS	yheR	NC_004741.1	4322336	4322887	D	required for KefB activity; glutathione-regulated potassium-efflux system ancillary protein KefG	4322336..4322887	Shigella flexneri 2a str. 2457T	1080601
NP_839535.1	CDS	kefB	NC_004741.1	4322963	4324624	D	involved in potassium efflux; glutathione-regulated potassium-efflux system protein KefB	4322963..4324624	Shigella flexneri 2a str. 2457T	1080602
NP_839536.1	CDS	slyD	NC_004741.1	4324929	4325519	D	rotamase; FKBP-type peptidyl-prolyl cis-trans isomerase	4324929..4325519	Shigella flexneri 2a str. 2457T	1080603
NP_839537.1	CDS	slyX	NC_004741.1	4325568	4325786	R	residues 1 to 72 of 72 are 77.77 pct identical to residues 1 to 72 of 72 from Escherichia coli K-12 : B3348; hypothetical protein	complement(4325568..4325786)	Shigella flexneri 2a str. 2457T	1080604
NP_839538.1	CDS	fkpA	NC_004741.1	4326007	4326819	D	rotamase; FKBP-type peptidyl-prolyl cis-trans isomerase	4326007..4326819	Shigella flexneri 2a str. 2457T	1080605
NP_839539.1	CDS	yheO	NC_004741.1	4326986	4327708	D	residues 1 to 240 of 240 are 100.00 pct identical to residues 5 to 244 of 244 from Escherichia coli K-12 : B3346; hypothetical protein	4326986..4327708	Shigella flexneri 2a str. 2457T	1080606
NP_839540.1	CDS	yheN	NC_004741.1	4327708	4328094	D	in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs; sulfur transfer complex subunit TusD	4327708..4328094	Shigella flexneri 2a str. 2457T	1080607
NP_839541.1	CDS	yheM	NC_004741.1	4328094	4328453	D	in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs; sulfur relay protein TusC	4328094..4328453	Shigella flexneri 2a str. 2457T	1080608
NP_839542.1	CDS	yheL	NC_004741.1	4328461	4328748	D	in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs; sulfur transfer complex subunit TusB	4328461..4328748	Shigella flexneri 2a str. 2457T	1080791
NP_839543.1	CDS	rpsL	NC_004741.1	4328874	4329248	D	interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12	4328874..4329248	Shigella flexneri 2a str. 2457T	1080974
NP_839544.1	CDS	rpsG	NC_004741.1	4329345	4329815	D	binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7	4329345..4329815	Shigella flexneri 2a str. 2457T	1080609
NP_839545.1	CDS	fusA	NC_004741.1	4330060	4332027	D	Promotes the GTP-dependent translocation of the nascent protein chain from the A-site to the P-site of the ribosome; elongation factor EF-2	4330060..4332027	Shigella flexneri 2a str. 2457T	1080610
NP_839546.1	CDS	tuf	NC_004741.1	4332098	4333282	D	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu	4332098..4333282	Shigella flexneri 2a str. 2457T	1080611
NP_839547.1	CDS	yheA	NC_004741.1	4333465	4333659	D	residues 1 to 64 of 64 are 87.50 pct identical to residues 1 to 64 of 64 from Escherichia coli K-12 : B3337; bacterioferritin-associated ferredoxin	4333465..4333659	Shigella flexneri 2a str. 2457T	1080612
NP_839548.1	CDS	bfr	NC_004741.1	4333732	4334208	D	iron storage protein; bacterioferritin	4333732..4334208	Shigella flexneri 2a str. 2457T	1080613
NP_839549.1	CDS	rpsJ	NC_004741.1	4335051	4335362	D	NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10	4335051..4335362	Shigella flexneri 2a str. 2457T	1080615
NP_839550.1	CDS	rplC	NC_004741.1	4335395	4336024	D	binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3	4335395..4336024	Shigella flexneri 2a str. 2457T	1080616
NP_839551.1	CDS	rplD	NC_004741.1	4336035	4336640	D	L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4	4336035..4336640	Shigella flexneri 2a str. 2457T	1080617
NP_839552.1	CDS	rplW	NC_004741.1	4336637	4336939	D	binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23	4336637..4336939	Shigella flexneri 2a str. 2457T	1080618
NP_839553.1	CDS	rplB	NC_004741.1	4336957	4337778	D	one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2	4336957..4337778	Shigella flexneri 2a str. 2457T	1080619
NP_839554.1	CDS	rpsS	NC_004741.1	4337795	4338073	D	protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19	4337795..4338073	Shigella flexneri 2a str. 2457T	1080620
NP_839555.1	CDS	rplV	NC_004741.1	4338088	4338420	D	binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22	4338088..4338420	Shigella flexneri 2a str. 2457T	1080621
NP_839556.1	CDS	rpsC	NC_004741.1	4338438	4339139	D	forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3	4338438..4339139	Shigella flexneri 2a str. 2457T	1080622
NP_839557.1	CDS	rplP	NC_004741.1	4339152	4339562	D	located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16	4339152..4339562	Shigella flexneri 2a str. 2457T	1080623
NP_839558.1	CDS	rpmC	NC_004741.1	4339562	4339753	D	one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29	4339562..4339753	Shigella flexneri 2a str. 2457T	1080624
NP_839559.1	CDS	rpsQ	NC_004741.1	4339753	4340007	D	primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17	4339753..4340007	Shigella flexneri 2a str. 2457T	1080625
NP_839560.1	CDS	rplN	NC_004741.1	4340172	4340543	D	binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14	4340172..4340543	Shigella flexneri 2a str. 2457T	1080626
NP_839561.1	CDS	rplX	NC_004741.1	4340554	4340868	D	assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24	4340554..4340868	Shigella flexneri 2a str. 2457T	1080627
NP_839562.1	CDS	rplE	NC_004741.1	4340883	4341422	D	part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5	4340883..4341422	Shigella flexneri 2a str. 2457T	1080628
NP_839563.1	CDS	rpsN	NC_004741.1	4341437	4341742	D	located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14	4341437..4341742	Shigella flexneri 2a str. 2457T	1080629
NP_839564.1	CDS	rpsH	NC_004741.1	4341776	4342168	D	binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8	4341776..4342168	Shigella flexneri 2a str. 2457T	1080630
NP_839565.1	CDS	rplF	NC_004741.1	4342181	4342714	D	ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6	4342181..4342714	Shigella flexneri 2a str. 2457T	1080631
NP_839566.1	CDS	rplR	NC_004741.1	4342724	4343077	D	binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18	4342724..4343077	Shigella flexneri 2a str. 2457T	1080632
NP_839567.1	CDS	rpsE	NC_004741.1	4343092	4343595	D	located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5	4343092..4343595	Shigella flexneri 2a str. 2457T	1080633
NP_839568.1	CDS	rpmD	NC_004741.1	4343599	4343778	D	L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30	4343599..4343778	Shigella flexneri 2a str. 2457T	1080634
NP_839569.1	CDS	rplO	NC_004741.1	4343782	4344216	D	late assembly protein; 50S ribosomal protein L15	4343782..4344216	Shigella flexneri 2a str. 2457T	1080635
NP_839570.1	CDS	secY	NC_004741.1	4344224	4345555	D	forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY	4344224..4345555	Shigella flexneri 2a str. 2457T	1080637
NP_839571.1	CDS	rpmJ	NC_004741.1	4345587	4345703	D	smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36	4345587..4345703	Shigella flexneri 2a str. 2457T	1080638
NP_839572.1	CDS	rpsM	NC_004741.1	4345850	4346206	D	located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13	4345850..4346206	Shigella flexneri 2a str. 2457T	1080639
NP_839573.1	CDS	rpsK	NC_004741.1	4346223	4346612	D	located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11	4346223..4346612	Shigella flexneri 2a str. 2457T	1080640
NP_839574.2	CDS	rpsD	NC_004741.1	4346646	4347266	D	primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4	4346646..4347266	Shigella flexneri 2a str. 2457T	1080641
NP_839575.1	CDS	rpoA	NC_004741.1	4347292	4348281	D	catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha	4347292..4348281	Shigella flexneri 2a str. 2457T	1080642
NP_839576.1	CDS	rplQ	NC_004741.1	4348322	4348705	D	is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17	4348322..4348705	Shigella flexneri 2a str. 2457T	1080643
NP_839577.1	CDS	S4437	NC_004741.1	4348875	4349549	D	residues 1 to 224 of 224 are 100.00 pct identical to residues 1 to 224 of 224 from GenPept : >gb|AAL72464.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; ISSfl3 orfA	4348875..4349549	Shigella flexneri 2a str. 2457T	1080644
NP_839578.1	CDS	S4438	NC_004741.1	4349546	4349896	D	residues 1 to 116 of 116 are 100.00 pct identical to residues 1 to 116 of 116 from GenPept : >gb|AAK18528.1|AF348706_217 (AF348706)  IS orf [Shigella flexneri]; ISSfl3 orfB	4349546..4349896	Shigella flexneri 2a str. 2457T	1080645
NP_839579.1	CDS	S4439	NC_004741.1	4349893	4350465	D	residues 1 to 190 of 190 are 93.15 pct identical to residues 1 to 190 of 190 from GenPept : >gb|AAK18527.1|AF348706_216 (AF348706)  IS orf [Shigella flexneri]; ISSfl3 orfC	4349893..4350465	Shigella flexneri 2a str. 2457T	1080646
NP_839580.1	CDS	S4440	NC_004741.1	4350527	4351489	D	residues 1 to 320 of 320 are 99.68 pct identical to residues 214 to 533 of 533 from GenPept : >gb|AAL72472.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; ISSfl3 orfD	4350527..4351489	Shigella flexneri 2a str. 2457T	1080647
NP_839581.2	CDS	S4441	NC_004741.1	4351813	4352178	D	IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats; insertion sequence 2 OrfA protein	4351813..4352178	Shigella flexneri 2a str. 2457T	1080648
NP_839582.2	CDS	S4442	NC_004741.1	4352136	4353041	D	IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats; insertion element IS2 transposase InsD	4352136..4353041	Shigella flexneri 2a str. 2457T	1080649
NP_839583.2	CDS	yjiI	NC_004741.1	4353240	4353824	R	in yeast cells this enzyme removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''-cyclic phosphate; functions in tRNA splicing; the function and substrate of bacterial enzymes in organisms that do not perform splicing is unknown; RNA 2'-phosphotransferase-like protein	complement(4353240..4353824)	Shigella flexneri 2a str. 2457T	1080650
NP_839584.1	CDS	yjiH	NC_004741.1	4354062	4354757	D	residues 1 to 231 of 231 are 99.13 pct identical to residues 1 to 231 of 231 from Escherichia coli K-12 : B4330; hypothetical protein	4354062..4354757	Shigella flexneri 2a str. 2457T	1080651
NP_839585.1	CDS	yjiG	NC_004741.1	4354754	4355215	D	residues 1 to 153 of 153 are 99.34 pct identical to residues 1 to 153 of 153 from Escherichia coli K-12 : B4329; hypothetical protein	4354754..4355215	Shigella flexneri 2a str. 2457T	1080652
NP_839586.1	CDS	iadA	NC_004741.1	4355228	4356400	D	residues 1 to 390 of 390 are 99.23 pct identical to residues 1 to 390 of 390 from Escherichia coli K-12 : B4328; isoaspartyl dipeptidase	4355228..4356400	Shigella flexneri 2a str. 2457T	1080653
NP_839587.1	CDS	yjiE	NC_004741.1	4356465	4357376	D	residues 1 to 303 of 303 are 94.71 pct identical to residues 1 to 303 of 303 from Escherichia coli K-12 : B4327; DNA-binding transcriptional regulator	4356465..4357376	Shigella flexneri 2a str. 2457T	1080654
NP_839588.1	CDS	yjiD	NC_004741.1	4357369	4357770	R	residues 1 to 133 of 133 are 99.24 pct identical to residues 1 to 133 of 133 from Escherichia coli K-12 : B4326; hypothetical protein	complement(4357369..4357770)	Shigella flexneri 2a str. 2457T	1080655
NP_839589.1	CDS	S4449	NC_004741.1	4358047	4358550	R	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAL72450.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS1 orfB	complement(4358047..4358550)	Shigella flexneri 2a str. 2457T	1080656
NP_839590.1	CDS	S4450	NC_004741.1	4358469	4358744	R	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(4358469..4358744)	Shigella flexneri 2a str. 2457T	1080657
NP_839591.1	CDS	uxuR	NC_004741.1	4360182	4360955	R	regulates the expression of uxuBA; DNA-binding transcriptional repressor UxuR	complement(4360182..4360955)	Shigella flexneri 2a str. 2457T	1080659
NP_839592.1	CDS	uxuB	NC_004741.1	4361170	4362630	R	residues 1 to 486 of 486 are 98.76 pct identical to residues 1 to 486 of 486 from Escherichia coli K-12 : B4323; D-mannonate oxidoreductase	complement(4361170..4362630)	Shigella flexneri 2a str. 2457T	1080660
NP_839593.1	CDS	uxuA	NC_004741.1	4362711	4363895	R	catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate; mannonate dehydratase	complement(4362711..4363895)	Shigella flexneri 2a str. 2457T	1080661
NP_839594.1	CDS	gntP	NC_004741.1	4364235	4365578	D	residues 1 to 447 of 447 are 91.49 pct identical to residues 1 to 447 of 447 from Escherichia coli K-12 : B4321; fructuronate transporter	4364235..4365578	Shigella flexneri 2a str. 2457T	1080662
NP_839595.1	CDS	fimH	NC_004741.1	4365829	4366731	R	residues 1 to 300 of 300 are 99.66 pct identical to residues 1 to 300 of 300 from Escherichia coli K-12 : B4320; minor fimbrial subunit, D-mannose specific adhesin	complement(4365829..4366731)	Shigella flexneri 2a str. 2457T	1080663
NP_839596.1	CDS	fimG	NC_004741.1	4366751	4367254	R	residues 1 to 167 of 167 are 99.40 pct identical to residues 1 to 167 of 167 from Escherichia coli K-12 : B4319; minor fimbrial subunit, precursor polypeptide	complement(4366751..4367254)	Shigella flexneri 2a str. 2457T	1080664
NP_839597.1	CDS	fimF	NC_004741.1	4367267	4367797	R	residues 1 to 176 of 176 are 97.72 pct identical to residues 1 to 176 of 176 from Escherichia coli K-12 : B4318; minor fimbrial subunit, precursor polypeptide	complement(4367267..4367797)	Shigella flexneri 2a str. 2457T	1080665
NP_839598.1	CDS	S4460	NC_004741.1	4369871	4370374	R	residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri]; IS1 orfB	complement(4369871..4370374)	Shigella flexneri 2a str. 2457T	1080667
NP_839599.1	CDS	S4461	NC_004741.1	4370293	4370568	R	residues 1 to 91 of 91 are 98.90 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(4370293..4370568)	Shigella flexneri 2a str. 2457T	1080668
NP_839600.1	CDS	fimC	NC_004741.1	4371286	4372011	R	residues 1 to 241 of 241 are 99.17 pct identical to residues 1 to 241 of 241 from Escherichia coli K-12 : B4316; required for type 1 fimbriae; periplasmic chaperone	complement(4371286..4372011)	Shigella flexneri 2a str. 2457T	1080669
NP_839601.1	CDS	fimI	NC_004741.1	4372048	4372686	R	residues 1 to 212 of 212 are 98.11 pct identical to residues 4 to 215 of 215 from Escherichia coli K-12 : B4315; fimbrial protein	complement(4372048..4372686)	Shigella flexneri 2a str. 2457T	1080670
NP_839602.1	CDS	fimA	NC_004741.1	4372652	4373200	R	residues 1 to 182 of 182 are 84.06 pct identical to residues 1 to 182 of 182 from Escherichia coli K-12 : B4314; major type 1 subunit fimbrin (pilin)	complement(4372652..4373200)	Shigella flexneri 2a str. 2457T	1080671
NP_839603.1	CDS	fimE	NC_004741.1	4373681	4374277	R	inversion of on/off regulator of fimA; tyrosine recombinase	complement(4373681..4374277)	Shigella flexneri 2a str. 2457T	1080672
NP_839604.1	CDS	fimB	NC_004741.1	4374872	4375357	R	residues 1 to 160 of 199 are 97.50 pct identical to residues 1 to 160 of 200 from Escherichia coli K-12 : B4312; involved in phase variation; recombinase; regulator for fimA	complement(4374872..4375357)	Shigella flexneri 2a str. 2457T	1080673
NP_839605.1	CDS	yjhA	NC_004741.1	4376979	4377527	D	residues 1 to 182 of 182 are 100.00 pct identical to residues 60 to 241 of 241 from Escherichia coli K-12 : B4311; hypothetical protein	4376979..4377527	Shigella flexneri 2a str. 2457T	1080674
NP_839606.1	CDS	yjhT	NC_004741.1	4377439	4378653	D	residues 1 to 404 of 404 are 98.76 pct identical to residues 1 to 404 of 404 from Escherichia coli K-12 : B4310; hypothetical protein	4377439..4378653	Shigella flexneri 2a str. 2457T	1080675
NP_839607.1	CDS	yjhS	NC_004741.1	4378940	4379698	D	residues 1 to 252 of 252 are 99.60 pct identical to residues 75 to 326 of 326 from Escherichia coli K-12 : B4309; hypothetical protein	4378940..4379698	Shigella flexneri 2a str. 2457T	1080676
NP_839608.1	CDS	S4471	NC_004741.1	4380167	4380670	R	residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri]; IS1 orfB	complement(4380167..4380670)	Shigella flexneri 2a str. 2457T	1080677
NP_839609.1	CDS	S4472	NC_004741.1	4380589	4380864	R	residues 1 to 91 of 91 are 98.90 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(4380589..4380864)	Shigella flexneri 2a str. 2457T	1080678
NP_839610.1	CDS	S4473	NC_004741.1	4380959	4381654	D	residues 1 to 231 of 231 are 81.46 pct identical to residues 30 to 261 of 261 from GenPept : >gb|AAL22652.1| (AE008876)  regulatory protein, deoR family [Salmonella typhimurium LT2]; DeoR family transcriptional regulator	4380959..4381654	Shigella flexneri 2a str. 2457T	1080679
NP_839611.1	CDS	S4474	NC_004741.1	4381755	4381871	R	residues 4 to 38 of 38 are 88.57 pct identical to residues 29 to 63 of 96 from GenPept : >emb|CAC50649.1| (AX188968) unnamed protein product [Escherichia coli]; hypothetical protein	complement(4381755..4381871)	Shigella flexneri 2a str. 2457T	1080680
NP_839612.1	CDS	S4475	NC_004741.1	4382130	4382408	D	residues 1 to 92 of 92 are 92.39 pct identical to residues 3 to 94 of 94 from GenPept : >gb|AAG53987.1|AF327445_1 (AF327445)  transposase A [Pantoea agglomerans]; ISEhe3a orf	4382130..4382408	Shigella flexneri 2a str. 2457T	1080681
NP_839613.1	CDS	S4476	NC_004741.1	4382477	4382779	D	residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAL72452.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS600 orfA	4382477..4382779	Shigella flexneri 2a str. 2457T	1080682
NP_839614.1	CDS	S4477	NC_004741.1	4382920	4383633	D	residues 1 to 237 of 237 are 91.13 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAL72453.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS600 orfB	4382920..4383633	Shigella flexneri 2a str. 2457T	1080683
NP_839615.1	CDS	S4479	NC_004741.1	4384901	4385176	D	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	4384901..4385176	Shigella flexneri 2a str. 2457T	1080685
NP_839616.1	CDS	S4480	NC_004741.1	4385095	4385598	D	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri]; IS1 orfB	4385095..4385598	Shigella flexneri 2a str. 2457T	1080686
NP_839617.1	CDS	S4481	NC_004741.1	4385791	4386093	D	residues 1 to 100 of 100 are 100.00 pct identical to residues 13 to 112 of 112 from GenPept : >gb|AAL72382.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS911 orfA	4385791..4386093	Shigella flexneri 2a str. 2457T	1080687
NP_839618.1	CDS	S4483	NC_004741.1	4386333	4386959	D	residues 1 to 208 of 208 are 100.00 pct identical to residues 72 to 279 of 279 from GenPept : >gb|AAL72449.1| (AF386526) InsB [Shigella flexneri 2a]; IS911 orfB	4386333..4386959	Shigella flexneri 2a str. 2457T	1080688
NP_839619.1	CDS	S4839	NC_004741.1	4386934	4388145	R	residues 1 to 403 of 403 are 91.58 pct identical to residues 1 to 404 of 431 from NRprotein_Feb03 : >ref|NP_668085.1|  prophage P4 integrase [Yersinia pestis KIM] gb|AAM84336.1|AE013677_1  prophage P4 integrase [Yersinia pestis KIM]; P4-type integrase	complement(4386934..4388145)	Shigella flexneri 2a str. 2457T	1080689
NP_839620.1	CDS	yjgB	NC_004741.1	4388582	4389643	D	residues 1 to 353 of 353 are 94.05 pct identical to residues 1 to 353 of 353 from Escherichia coli K-12 : B4269; oxidoreductase	4388582..4389643	Shigella flexneri 2a str. 2457T	1080691
NP_839621.1	CDS	yjgR	NC_004741.1	4389772	4391286	D	residues 1 to 500 of 504 are 94.59 pct identical to residues 1 to 500 of 500 from Escherichia coli K-12 : B4263; hypothetical protein	4389772..4391286	Shigella flexneri 2a str. 2457T	1080693
NP_839622.1	CDS	yjgQ	NC_004741.1	4391394	4392476	R	residues 1 to 360 of 360 are 91.66 pct identical to residues 2 to 361 of 361 from Escherichia coli K-12 : B4262; hypothetical protein	complement(4391394..4392476)	Shigella flexneri 2a str. 2457T	1080694
NP_839623.1	CDS	yjgP	NC_004741.1	4392476	4393576	R	residues 1 to 366 of 366 are 86.88 pct identical to residues 1 to 366 of 366 from Escherichia coli K-12 : B4261; hypothetical protein	complement(4392476..4393576)	Shigella flexneri 2a str. 2457T	1077860
NP_839624.1	CDS	pepA	NC_004741.1	4393843	4395354	D	catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase	4393843..4395354	Shigella flexneri 2a str. 2457T	1080695
NP_839625.1	CDS	holC	NC_004741.1	4395488	4395931	D	binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB; DNA polymerase III subunit chi	4395488..4395931	Shigella flexneri 2a str. 2457T	1080696
NP_839626.1	CDS	valS	NC_004741.1	4395931	4398786	D	valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase	4395931..4398786	Shigella flexneri 2a str. 2457T	1080697
NP_839627.1	CDS	yjgN	NC_004741.1	4398840	4400036	R	residues 1 to 389 of 389 are 87.91 pct identical to residues 5 to 393 of 393 from Escherichia coli K-12 : B4257; hypothetical protein	complement(4398840..4400036)	Shigella flexneri 2a str. 2457T	1080698
NP_839628.1	CDS	yjgD	NC_004741.1	4400775	4401191	R	residues 1 to 119 of 138 are 84.03 pct identical to residues 1 to 119 of 138 from Escherichia coli K-12 : B4255; hypothetical protein	complement(4400775..4401191)	Shigella flexneri 2a str. 2457T	1080700
NP_839629.1	CDS	argI	NC_004741.1	4401353	4402366	D	catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; E. coli K12 has two genes, argF and argI, capable of producing functional ornithine carbamoyltransferase. When both are active in the same cell, the two gene products form a family of four hybrid trimeric isoenzymes designated, FFF, FFI, FII, and III.; ornithine carbamoyltransferase subunit I	4401353..4402366	Shigella flexneri 2a str. 2457T	1080701
NP_839630.1	CDS	S4497	NC_004741.1	4402438	4402713	D	residues 1 to 91 of 91 are 98.90 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	4402438..4402713	Shigella flexneri 2a str. 2457T	1080702
NP_839631.1	CDS	S4498	NC_004741.1	4402632	4403135	D	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri]; IS1 orfB	4402632..4403135	Shigella flexneri 2a str. 2457T	1080703
NP_839632.1	CDS	yjgK	NC_004741.1	4403997	4404449	R	residues 1 to 150 of 150 are 100.00 pct identical to residues 4 to 153 of 153 from Escherichia coli K-12 : B4252; hypothetical protein	complement(4403997..4404449)	Shigella flexneri 2a str. 2457T	1080705
NP_839633.1	CDS	yjgJ	NC_004741.1	4404594	4404848	R	residues 1 to 84 of 84 are 94.04 pct identical to residues 1 to 84 of 84 from Escherichia coli K-12 : B4251; hypothetical protein	complement(4404594..4404848)	Shigella flexneri 2a str. 2457T	1080706
NP_839634.1	CDS	S4502	NC_004741.1	4404920	4405075	R	residues 3 to 51 of 51 are 93.87 pct identical to residues 6 to 54 of 54 from Escherichia coli K-12 : B4250; hypothetical protein	complement(4404920..4405075)	Shigella flexneri 2a str. 2457T	1080707
NP_839635.1	CDS	yjgI	NC_004741.1	4405258	4405971	D	residues 1 to 237 of 237 are 93.24 pct identical to residues 1 to 237 of 237 from Escherichia coli K-12 : B4249; oxidoreductase	4405258..4405971	Shigella flexneri 2a str. 2457T	1080708
NP_839636.1	CDS	yjgH	NC_004741.1	4406103	4406498	D	residues 1 to 130 of 131 are 98.46 pct identical to residues 1 to 130 of 131 from Escherichia coli K-12 : B4248; hypothetical protein	4406103..4406498	Shigella flexneri 2a str. 2457T	1080709
NP_839637.1	CDS	yjgG	NC_004741.1	4406467	4406799	R	residues 1 to 110 of 110 are 87.27 pct identical to residues 1 to 110 of 110 from Escherichia coli K-12 : B4247; hypothetical protein	complement(4406467..4406799)	Shigella flexneri 2a str. 2457T	1080710
NP_839638.1	CDS	pyrL	NC_004741.1	4406779	4406913	D	residues 1 to 44 of 44 are 97.72 pct identical to residues 1 to 44 of 44 from Escherichia coli K-12 : B4246; pyrBI operon leader peptide	4406779..4406913	Shigella flexneri 2a str. 2457T	1080711
NP_839639.1	CDS	pyrB	NC_004741.1	4406917	4407852	D	catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit	4406917..4407852	Shigella flexneri 2a str. 2457T	1080712
NP_839640.1	CDS	pyrI	NC_004741.1	4407865	4408326	D	involved in the allosteric regulation of aspartate carbamoyltransferase; aspartate carbamoyltransferase regulatory subunit	4407865..4408326	Shigella flexneri 2a str. 2457T	1080713
NP_839641.1	CDS	yjgF	NC_004741.1	4408360	4408785	D	residues 1 to 141 of 141 are 100.00 pct identical to residues 1 to 141 of 141 from Escherichia coli K-12 : B4243; hypothetical protein	4408360..4408785	Shigella flexneri 2a str. 2457T	1080714
NP_839642.1	CDS	mgtA	NC_004741.1	4408991	4411687	R	P-type ATPase involved in magnesium influx; magnesium-transporting ATPase MgtA	complement(4408991..4411687)	Shigella flexneri 2a str. 2457T	1080715
NP_839643.1	CDS	treR	NC_004741.1	4412066	4413013	D	regulates genes involved in trehalose metabolism; binds the intermediate trehalose-6-phosphate; binds a dimer; regulates treBC operon; trehalose repressor	4412066..4413013	Shigella flexneri 2a str. 2457T	1080716
NP_839644.1	CDS	treB	NC_004741.1	4413135	4414553	D	phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; trehalose(maltose)-specific PTS system components IIBC	4413135..4414553	Shigella flexneri 2a str. 2457T	1080717
NP_839645.1	CDS	treC	NC_004741.1	4414603	4416258	D	residues 1 to 551 of 551 are 99.45 pct identical to residues 1 to 551 of 551 from Escherichia coli K-12 : B4239; trehalose-6-phosphate hydrolase	4414603..4416258	Shigella flexneri 2a str. 2457T	1080718
NP_839646.1	CDS	nrdD	NC_004741.1	4416652	4418790	D	Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase	4416652..4418790	Shigella flexneri 2a str. 2457T	1080719
NP_839647.1	CDS	nrdG	NC_004741.1	4418948	4419412	D	activates anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions; anaerobic ribonucleotide reductase-activating protein	4418948..4419412	Shigella flexneri 2a str. 2457T	1080720
NP_839648.1	CDS	pmbA	NC_004741.1	4420022	4421374	R	protease involved in proteolytic processing of the antibiotic Microcin B17 and in sensitivity to the DNA gyrase inhibitor LetD; peptidase PmbA	complement(4420022..4421374)	Shigella flexneri 2a str. 2457T	1080722
NP_839649.1	CDS	yjgA	NC_004741.1	4421468	4422019	D	residues 1 to 183 of 183 are 93.44 pct identical to residues 1 to 183 of 183 from Escherichia coli K-12 : B4234; hypothetical protein	4421468..4422019	Shigella flexneri 2a str. 2457T	1080723
NP_839650.1	CDS	yjfG	NC_004741.1	4422102	4423475	R	residues 1 to 457 of 457 are 99.78 pct identical to residues 1 to 457 of 457 from Escherichia coli K-12 : B4233; ligase	complement(4422102..4423475)	Shigella flexneri 2a str. 2457T	1080724
NP_839651.1	CDS	fbp	NC_004741.1	4423651	4424649	D	catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase	4423651..4424649	Shigella flexneri 2a str. 2457T	1080725
NP_839652.1	CDS	S4521	NC_004741.1	4424687	4426015	R	residues 1 to 442 of 442 are 99.77 pct identical to residues 7 to 448 of 448 from GenPept : >gb|AAK18333.1|AF348706_22 (AF348706) IS4 orf [Shigella flexneri]; IS4 orf	complement(4424687..4426015)	Shigella flexneri 2a str. 2457T	1080728
NP_839653.1	CDS	ytfT	NC_004741.1	4427102	4428127	R	residues 1 to 341 of 341 are 71.84 pct identical to residues 1 to 341 of 341 from Escherichia coli K-12 : B4230; transport system permease	complement(4427102..4428127)	Shigella flexneri 2a str. 2457T	1080730
NP_839654.1	CDS	ytfR	NC_004741.1	4428138	4429640	R	residues 1 to 381 of 500 are 95.80 pct identical to residues 1 to 381 of 417 from Escherichia coli K-12 : B4228; ATP-binding component of a transport system	complement(4428138..4429640)	Shigella flexneri 2a str. 2457T	1080733
NP_839655.1	CDS	ppa	NC_004741.1	4431046	4431576	D	catalyzes the hydrolysis of pyrophosphate to phosphate; inorganic pyrophosphatase	4431046..4431576	Shigella flexneri 2a str. 2457T	1080735
NP_839656.1	CDS	yjfA	NC_004741.1	4431952	4432215	D	residues 1 to 87 of 87 are 96.55 pct identical to residues 3 to 89 of 89 from Escherichia coli K-12 : B4223; hypothetical protein	4431952..4432215	Shigella flexneri 2a str. 2457T	1080736
NP_839657.1	CDS	ytfP	NC_004741.1	4431956	4432297	R	residues 1 to 113 of 113 are 100.00 pct identical to residues 1 to 113 of 113 from Escherichia coli K-12 : B4222; hypothetical protein	complement(4431956..4432297)	Shigella flexneri 2a str. 2457T	1080737
NP_839658.1	CDS	ytfN	NC_004741.1	4432300	4436079	R	residues 1 to 1259 of 1259 are 94.91 pct identical to residues 1 to 1259 of 1259 from Escherichia coli K-12 : B4221; hypothetical protein	complement(4432300..4436079)	Shigella flexneri 2a str. 2457T	1080738
NP_839659.1	CDS	ytfM	NC_004741.1	4436076	4437809	R	residues 1 to 577 of 577 are 96.88 pct identical to residues 1 to 577 of 577 from Escherichia coli K-12 : B4220; hypothetical protein	complement(4436076..4437809)	Shigella flexneri 2a str. 2457T	1080739
NP_839660.1	CDS	msrA	NC_004741.1	4438015	4438653	D	this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A	4438015..4438653	Shigella flexneri 2a str. 2457T	1080740
NP_839661.1	CDS	ytfL	NC_004741.1	4438976	4440319	D	residues 1 to 447 of 447 are 97.09 pct identical to residues 1 to 447 of 447 from Escherichia coli K-12 : B4218; transporter	4438976..4440319	Shigella flexneri 2a str. 2457T	1080741
NP_839662.1	CDS	ytfK	NC_004741.1	4440381	4440626	R	residues 1 to 81 of 81 are 98.37 pct identical to residues 1 to 81 of 81 from Escherichia coli K-12 : B4217; hypothetical protein	complement(4440381..4440626)	Shigella flexneri 2a str. 2457T	1080742
NP_839663.1	CDS	ytfJ	NC_004741.1	4440912	4441466	D	residues 1 to 184 of 184 are 98.36 pct identical to residues 1 to 184 of 184 from Escherichia coli K-12 : B4216; hypothetical protein	4440912..4441466	Shigella flexneri 2a str. 2457T	1077112
NP_839664.1	CDS	cysQ	NC_004741.1	4442679	4443419	R	catalyzes the formation of AMP from adenosine-3',5'-bisphosphate; adenosine-3'(2'),5'-bisphosphate nucleotidase	complement(4442679..4443419)	Shigella flexneri 2a str. 2457T	1080744
NP_839665.1	CDS	cpdB	NC_004741.1	4443609	4445552	D	periplasmic enzyme; functions during ribonucleic acid degradation; 2',3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate; bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein	4443609..4445552	Shigella flexneri 2a str. 2457T	1080745
NP_839666.1	CDS	ytfH	NC_004741.1	4445678	4446148	R	residues 1 to 156 of 156 are 100.00 pct identical to residues 1 to 156 of 156 from Escherichia coli K-12 : B4212; hypothetical protein	complement(4445678..4446148)	Shigella flexneri 2a str. 2457T	1080749
NP_839667.1	CDS	ytfG	NC_004741.1	4446147	4447007	D	residues 1 to 286 of 286 are 93.70 pct identical to residues 1 to 286 of 286 from Escherichia coli K-12 : B4211; oxidoreductase	4446147..4447007	Shigella flexneri 2a str. 2457T	1077990
NP_839668.1	CDS	ytfF	NC_004741.1	4447116	4448081	D	residues 1 to 321 of 321 are 95.01 pct identical to residues 4 to 324 of 324 from Escherichia coli K-12 : B4210; transmembrane subunit	4447116..4448081	Shigella flexneri 2a str. 2457T	1080750
NP_839669.1	CDS	ytfE	NC_004741.1	4448189	4448851	D	Involved in anaerobic NO protection and iron metabolism; iron-sulfur cluster repair di-iron protein	4448189..4448851	Shigella flexneri 2a str. 2457T	1080751
NP_839670.1	CDS	cycA	NC_004741.1	4448896	4450308	R	involved in the transport across the cytoplasmic membrane of D-alanine, D-serine and glycine; D-alanine/D-serine/glycine permease	complement(4448896..4450308)	Shigella flexneri 2a str. 2457T	1080753
NP_839671.1	CDS	ytfB	NC_004741.1	4451419	4452000	D	residues 1 to 193 of 193 are 68.75 pct identical to residues 1 to 224 of 224 from Escherichia coli K-12 : B4206; hypothetical protein	4451419..4452000	Shigella flexneri 2a str. 2457T	1080754
NP_839672.1	CDS	ytfA	NC_004741.1	4451984	4452310	R	residues 1 to 108 of 108 are 98.14 pct identical to residues 1 to 108 of 108 from Escherichia coli K-12 : B4205; hypothetical protein	complement(4451984..4452310)	Shigella flexneri 2a str. 2457T	1079030
NP_839673.1	CDS	fabG	NC_004741.1	4452843	4453634	D	catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase	4452843..4453634	Shigella flexneri 2a str. 2457T	1080755
NP_839674.1	CDS	S4548	NC_004741.1	4453644	4454528	D	residues 1 to 294 of 294 are 99.65 pct identical to residues 1 to 294 of 294 from GenPept : >gb|AAL50626.1|AF417476_3 (AF417476) unknown [Shigella flexneri]; hypothetical protein	4453644..4454528	Shigella flexneri 2a str. 2457T	1077714
NP_839675.1	CDS	S4549	NC_004741.1	4454463	4454966	R	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri]; IS1 orfB	complement(4454463..4454966)	Shigella flexneri 2a str. 2457T	1080756
NP_839676.1	CDS	S4550	NC_004741.1	4454885	4455160	R	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(4454885..4455160)	Shigella flexneri 2a str. 2457T	1080757
NP_839677.1	CDS	S4551	NC_004741.1	4455218	4456036	D	residues 1 to 272 of 272 are 91.54 pct identical to residues 1 to 272 of 272 from GenPept : >gb|AAL72453.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS600 orfB	4455218..4456036	Shigella flexneri 2a str. 2457T	1080758
NP_839678.1	CDS	S4552	NC_004741.1	4456077	4457129	R	residues 1 to 350 of 350 are 94.85 pct identical to residues 1 to 350 of 444 from Escherichia coli K-12 : B4132; transport of lysine/cadaverine	complement(4456077..4457129)	Shigella flexneri 2a str. 2457T	1080759
NP_839679.1	CDS	S4553	NC_004741.1	4457304	4457579	D	residues 1 to 91 of 91 are 98.90 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	4457304..4457579	Shigella flexneri 2a str. 2457T	1080760
NP_839680.1	CDS	S4554	NC_004741.1	4457498	4458001	D	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri]; IS1 orfB	4457498..4458001	Shigella flexneri 2a str. 2457T	1080761
NP_839681.1	CDS	yjdC	NC_004741.1	4458546	4459121	R	residues 1 to 191 of 191 are 99.47 pct identical to residues 9 to 199 of 199 from Escherichia coli K-12 : B4135; transcriptional regulator	complement(4458546..4459121)	Shigella flexneri 2a str. 2457T	1080763
NP_839682.1	CDS	dipZ	NC_004741.1	4459158	4460855	R	two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm; DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm; thiol:disulfide interchange protein precursor	complement(4459158..4460855)	Shigella flexneri 2a str. 2457T	1080764
NP_839683.1	CDS	cutA	NC_004741.1	4460831	4461169	R	copper binding protein required for copper tolerance; involved in resistance toward heavy metals; divalent-cation tolerance protein CutA	complement(4460831..4461169)	Shigella flexneri 2a str. 2457T	1080765
NP_839684.1	CDS	dcuA	NC_004741.1	4461285	4462586	R	functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to dcuB; anaerobic C4-dicarboxylate transporter	complement(4461285..4462586)	Shigella flexneri 2a str. 2457T	1080766
NP_839685.1	CDS	aspA	NC_004741.1	4462704	4464185	R	catalyzes the formation of fumarate from aspartate; aspartate ammonia-lyase	complement(4462704..4464185)	Shigella flexneri 2a str. 2457T	1080767
NP_839686.2	CDS	fxsA	NC_004741.1	4464477	4464953	D	F exclusion of bacteriophage T7; overproduction of this protein in Escherichia coli inhibits the F plasmid-mediated exclusion of bacteriophage T7; interacts with the F plasmid-encoded PifA protein; inner membrane protein; FxsA	4464477..4464953	Shigella flexneri 2a str. 2457T	1080768
NP_839687.1	CDS	yjeH	NC_004741.1	4464969	4466225	R	uncharacterized member of the APC superfamily of amino acid transporters; unknown function; inner membrane protein YjeH	complement(4464969..4466225)	Shigella flexneri 2a str. 2457T	1080769
NP_839688.1	CDS	groES	NC_004741.1	4466501	4466794	D	10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES	4466501..4466794	Shigella flexneri 2a str. 2457T	1080771
NP_839689.1	CDS	groEL	NC_004741.1	4466838	4468484	D	60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL	4466838..4468484	Shigella flexneri 2a str. 2457T	1080772
NP_839690.1	CDS	yjeI	NC_004741.1	4468589	4468975	D	residues 1 to 128 of 128 are 100.00 pct identical to residues 1 to 128 of 128 from Escherichia coli K-12 : B4144; hypothetical protein	4468589..4468975	Shigella flexneri 2a str. 2457T	1080773
NP_839691.1	CDS	yjeJ	NC_004741.1	4469178	4470047	R	residues 1 to 289 of 289 are 99.65 pct identical to residues 1 to 289 of 289 from Escherichia coli K-12 : B4145; hypothetical protein	complement(4469178..4470047)	Shigella flexneri 2a str. 2457T	1080774
NP_839692.1	CDS	S4567	NC_004741.1	4470233	4470508	D	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	4470233..4470508	Shigella flexneri 2a str. 2457T	1080775
NP_839693.1	CDS	S4568	NC_004741.1	4470427	4470930	D	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri]; IS1 orfB	4470427..4470930	Shigella flexneri 2a str. 2457T	1080776
NP_839694.1	CDS	yjeK	NC_004741.1	4471209	4472237	R	residues 1 to 342 of 342 are 98.24 pct identical to residues 1 to 342 of 342 from Escherichia coli K-12 : B4146; hypothetical protein	complement(4471209..4472237)	Shigella flexneri 2a str. 2457T	1080777
NP_839695.1	CDS	efp	NC_004741.1	4472279	4472845	D	Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P	4472279..4472845	Shigella flexneri 2a str. 2457T	1080778
NP_839696.1	CDS	sugE	NC_004741.1	4473305	4473772	D	residues 1 to 155 of 155 are 87.09 pct identical to residues 1 to 155 of 155 from Escherichia coli K-12 : B4148; may be a chaperone; suppresser of groEL	4473305..4473772	Shigella flexneri 2a str. 2457T	1080779
NP_839697.1	CDS	blc	NC_004741.1	4473769	4474302	R	lipocalin; globomycin-sensitive outer membrane lipoprotein; outer membrane lipoprotein Blc	complement(4473769..4474302)	Shigella flexneri 2a str. 2457T	1077869
NP_839698.1	CDS	ampC	NC_004741.1	4474391	4475524	R	residues 1 to 377 of 377 are 98.14 pct identical to residues 1 to 377 of 377 from Escherichia coli K-12 : B4150; involved in penicillin resistance; beta-lactamase	complement(4474391..4475524)	Shigella flexneri 2a str. 2457T	1080780
NP_839699.1	CDS	frdD	NC_004741.1	4475587	4475946	R	in conjunction with FrdC acts to anchor the catalytic components of the fumarate reductase to the cytoplasmic membrane; fumarate reductase subunit D	complement(4475587..4475946)	Shigella flexneri 2a str. 2457T	1080781
NP_839700.1	CDS	frdC	NC_004741.1	4475957	4476352	R	part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase subunit C	complement(4475957..4476352)	Shigella flexneri 2a str. 2457T	1080782
NP_839701.1	CDS	frdB	NC_004741.1	4476363	4477097	R	part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase iron-sulfur subunit	complement(4476363..4477097)	Shigella flexneri 2a str. 2457T	1080783
NP_839702.1	CDS	frdA	NC_004741.1	4477090	4478898	R	part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase flavoprotein subunit	complement(4477090..4478898)	Shigella flexneri 2a str. 2457T	1080784
NP_839703.1	CDS	yjeA	NC_004741.1	4479223	4480200	D	lysine--tRNA ligase beta chain; poxA; class II aminoacyl tRNA synthetase; catalyzes a two-step reaction; first charging a lysine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; lysyl-tRNA synthetase	4479223..4480200	Shigella flexneri 2a str. 2457T	1080785
NP_839704.1	CDS	S4579	NC_004741.1	4480989	4481264	R	residues 1 to 91 of 91 are 98.90 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(4480989..4481264)	Shigella flexneri 2a str. 2457T	1080786
NP_839705.1	CDS	yjeP	NC_004741.1	4482805	4486116	R	residues 1 to 1103 of 1103 are 95.39 pct identical to residues 1 to 1107 of 1107 from Escherichia coli K-12 : B4159; hypothetical protein	complement(4482805..4486116)	Shigella flexneri 2a str. 2457T	1080788
NP_839706.1	CDS	psd	NC_004741.1	4486138	4487106	R	catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine; phosphatidylserine decarboxylase	complement(4486138..4487106)	Shigella flexneri 2a str. 2457T	1080976
NP_839707.2	CDS	yjeQ	NC_004741.1	4487203	4488255	R	EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; ribosome-associated GTPase	complement(4487203..4488255)	Shigella flexneri 2a str. 2457T	1080789
NP_839708.2	CDS	yjeR	NC_004741.1	4488350	4488895	D	3'-5' exoribonuclease specific for small oligoribonuclotides; oligoribonuclease	4488350..4488895	Shigella flexneri 2a str. 2457T	1080906
NP_839709.1	CDS	yjeS	NC_004741.1	4489906	4491045	R	residues 1 to 379 of 379 are 99.47 pct identical to residues 1 to 379 of 379 from Escherichia coli K-12 : B4166; hypothetical protein	complement(4489906..4491045)	Shigella flexneri 2a str. 2457T	1080795
NP_839710.1	CDS	yjeF	NC_004741.1	4491044	4492591	D	residues 1 to 515 of 515 are 92.42 pct identical to residues 1 to 515 of 515 from Escherichia coli K-12 : B4167; hypothetical protein	4491044..4492591	Shigella flexneri 2a str. 2457T	1077769
NP_839711.1	CDS	yjeE	NC_004741.1	4492563	4493024	D	possibly involved in cell wall synthesis; ATPase	4492563..4493024	Shigella flexneri 2a str. 2457T	1080796
NP_839712.1	CDS	amiB	NC_004741.1	4493043	4494380	D	residues 1 to 445 of 445 are 93.48 pct identical to residues 1 to 445 of 445 from Escherichia coli K-12 : B4169; N-acetylmuramoyl-l-alanine amidase II	4493043..4494380	Shigella flexneri 2a str. 2457T	1080911
NP_839713.1	CDS	mutL	NC_004741.1	4494390	4496237	D	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein	4494390..4496237	Shigella flexneri 2a str. 2457T	1080798
NP_839714.1	CDS	miaA	NC_004741.1	4496230	4497180	D	IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase	4496230..4497180	Shigella flexneri 2a str. 2457T	1079793
NP_839715.1	CDS	hfq	NC_004741.1	4497266	4497574	D	Stimulates the elongation of poly(A) tails; RNA-binding protein Hfq	4497266..4497574	Shigella flexneri 2a str. 2457T	1080960
NP_839716.1	CDS	hflX	NC_004741.1	4497650	4498930	D	involved in modulation of proteins HflK and HflC; part of the hflA locus (high frequency of lysogenization) which governs the lysis-lysogeny decision of bacteriophage lambda by controlling stability of the phage cII protein; GTPase HflX	4497650..4498930	Shigella flexneri 2a str. 2457T	1080799
NP_839717.1	CDS	hflK	NC_004741.1	4499016	4500275	D	with HflC inhibits proteolysis of lambda cII protein by FtsH; FtsH protease regulator HflK	4499016..4500275	Shigella flexneri 2a str. 2457T	1080800
NP_839718.1	CDS	hflC	NC_004741.1	4500278	4501282	D	with HflK inhibits proteolysis of lambda cII protein by FtsH; FtsH protease regulator HflC	4500278..4501282	Shigella flexneri 2a str. 2457T	1080801
NP_839719.1	CDS	yjeT	NC_004741.1	4501364	4501561	D	residues 1 to 65 of 65 are 63.07 pct identical to residues 1 to 65 of 65 from Escherichia coli K-12 : B4176; hypothetical protein	4501364..4501561	Shigella flexneri 2a str. 2457T	1078110
NP_839720.1	CDS	purA	NC_004741.1	4501665	4502963	D	catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase	4501665..4502963	Shigella flexneri 2a str. 2457T	1080802
NP_839721.1	CDS	yjeB	NC_004741.1	4503168	4503593	D	negatively regulates the transcription of genes upregulated by nitrosative stress; transcriptional repressor NsrR	4503168..4503593	Shigella flexneri 2a str. 2457T	1080926
NP_839722.2	CDS	vacB	NC_004741.1	4503632	4506073	D	3'-5'exoribonuclease that acts nonspecifically on poly(A), poly(U) and ribosomal RNAs; exoribonuclease R	4503632..4506073	Shigella flexneri 2a str. 2457T	1080803
NP_839723.1	CDS	yjfH	NC_004741.1	4506253	4506984	D	Specifically methylates the ribose of guanosine 2251 in 23S rRNA; 23S rRNA (guanosine-2'-O-)-methyltransferase	4506253..4506984	Shigella flexneri 2a str. 2457T	1080804
NP_839724.1	CDS	S4604	NC_004741.1	4507085	4507360	D	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	4507085..4507360	Shigella flexneri 2a str. 2457T	1080806
NP_839725.1	CDS	S4605	NC_004741.1	4507279	4507782	D	residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri]; IS1 orfB	4507279..4507782	Shigella flexneri 2a str. 2457T	1080807
NP_839726.1	CDS	yjfM	NC_004741.1	4508048	4508686	D	residues 1 to 212 of 212 are 74.05 pct identical to residues 1 to 212 of 212 from Escherichia coli K-12 : B4185; hypothetical protein	4508048..4508686	Shigella flexneri 2a str. 2457T	1080809
NP_839727.1	CDS	yjfC	NC_004741.1	4508689	4509852	D	residues 1 to 387 of 387 are 94.83 pct identical to residues 1 to 387 of 387 from Escherichia coli K-12 : B4186; synthetase/amidase	4508689..4509852	Shigella flexneri 2a str. 2457T	1080810
NP_839728.1	CDS	S4610	NC_004741.1	4511235	4511738	R	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri]; IS1 orfB	complement(4511235..4511738)	Shigella flexneri 2a str. 2457T	1080812
NP_839729.1	CDS	S4611	NC_004741.1	4511657	4511932	R	residues 1 to 91 of 91 are 98.90 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	complement(4511657..4511932)	Shigella flexneri 2a str. 2457T	1080792
NP_839730.1	CDS	yjfN	NC_004741.1	4512455	4512757	R	residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from Escherichia coli K-12 : B4188; hypothetical protein	complement(4512455..4512757)	Shigella flexneri 2a str. 2457T	1080813
NP_839731.2	CDS	yjfO	NC_004741.1	4512879	4513208	R	residues 1 to 142 of 142 are 87.32 pct identical to residues 1 to 142 of 142 from Escherichia coli K-12 : B4189; hypothetical protein	complement(4512879..4513208)	Shigella flexneri 2a str. 2457T	1080814
NP_839732.1	CDS	yjfP	NC_004741.1	4513390	4514139	D	YjfP; esterase activity towards palmitoyl-CoA and pNP-butyrate in vitro; unknown function and substrate in vivo; esterase	4513390..4514139	Shigella flexneri 2a str. 2457T	1080815
NP_839733.1	CDS	yjfQ	NC_004741.1	4514136	4514891	R	negative regulator of ulaG and ulaABCDEF; transcriptional repressor UlaR	complement(4514136..4514891)	Shigella flexneri 2a str. 2457T	1080816
NP_839734.1	CDS	yjfR	NC_004741.1	4514999	4516069	R	residues 1 to 356 of 356 are 96.34 pct identical to residues 1 to 356 of 356 from Escherichia coli K-12 : B4192; L-ascorbate 6-phosphate lactonase	complement(4514999..4516069)	Shigella flexneri 2a str. 2457T	1080817
NP_839735.2	CDS	ulaA	NC_004741.1	4516418	4517815	D	membrane component; functions with enzymes IIB (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr; ascorbate-specific PTS system enzyme IIC	4516418..4517815	Shigella flexneri 2a str. 2457T	1080818
NP_839736.1	CDS	sgaB	NC_004741.1	4517831	4518136	D	residues 1 to 101 of 101 are 99.00 pct identical to residues 1 to 101 of 101 from Escherichia coli K-12 : B4194; L-ascorbate-specific enzyme IIB component of PTS	4517831..4518136	Shigella flexneri 2a str. 2457T	1080819
NP_839737.1	CDS	ptxA	NC_004741.1	4518146	4518610	D	residues 1 to 154 of 154 are 95.45 pct identical to residues 1 to 154 of 154 from Escherichia coli K-12 : B4195; L-ascorbate-specific enzyme IIA component of PTS	4518146..4518610	Shigella flexneri 2a str. 2457T	1080820
NP_839738.1	CDS	ulaD	NC_004741.1	4518624	4519274	D	catalyzes the formation of L-xylulose-5-phosphate from 3-keto-L-gulonate-6-phosphate in anaerobic L-ascorbate utilization; 3-keto-L-gulonate-6-phosphate decarboxylase	4518624..4519274	Shigella flexneri 2a str. 2457T	1080821
NP_839739.1	CDS	sgaU	NC_004741.1	4519284	4520138	D	UlaE; catalyzes the epimerization of L-ribulose-5-phosphate into L-xylulose-5-phosphate; part of the anaerobic L-ascorbate degradation pathway; L-xylulose 5-phosphate 3-epimerase	4519284..4520138	Shigella flexneri 2a str. 2457T	1080822
NP_839740.1	CDS	sgaE	NC_004741.1	4520138	4520824	D	catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source; L-ribulose-5-phosphate 4-epimerase	4520138..4520824	Shigella flexneri 2a str. 2457T	1080823
NP_839741.1	CDS	yjfY	NC_004741.1	4520953	4521228	R	residues 1 to 91 of 91 are 89.01 pct identical to residues 1 to 91 of 91 from Escherichia coli K-12 : B4199; hypothetical protein	complement(4520953..4521228)	Shigella flexneri 2a str. 2457T	1080824
NP_839742.1	CDS	rpsF	NC_004741.1	4521555	4521950	D	binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6	4521555..4521950	Shigella flexneri 2a str. 2457T	1080825
NP_839743.1	CDS	priB	NC_004741.1	4521957	4522271	D	binds single-stranded DNA at the primosome assembly site; primosomal replication protein N	4521957..4522271	Shigella flexneri 2a str. 2457T	1080826
NP_839744.1	CDS	rpsR	NC_004741.1	4522276	4522503	D	binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18	4522276..4522503	Shigella flexneri 2a str. 2457T	1077861
NP_839745.1	CDS	rplI	NC_004741.1	4522545	4522994	D	in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9	4522545..4522994	Shigella flexneri 2a str. 2457T	1080827
NP_839746.1	CDS	S4629	NC_004741.1	4523692	4523970	D	residues 1 to 92 of 92 are 92.39 pct identical to residues 3 to 94 of 94 from GenPept : >gb|AAG53987.1|AF327445_1 (AF327445)  transposase A [Pantoea agglomerans]; ISEhe3 orfA	4523692..4523970	Shigella flexneri 2a str. 2457T	1080828
NP_839747.1	CDS	S4630	NC_004741.1	4524027	4524608	D	residues 1 to 193 of 193 are 95.85 pct identical to residues 10 to 202 of 279 from GenPept : >gb|AAG53988.1|AF327445_2 (AF327445)  transposase B [Pantoea agglomerans]; ISEhe3 orfB	4524027..4524608	Shigella flexneri 2a str. 2457T	1080829
NP_839748.1	CDS	S4631	NC_004741.1	4524649	4525362	R	residues 1 to 237 of 237 are 91.13 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAK18576.1|AF348706_265 (AF348706) IS600 orfB [Shigella flexneri]; IS600 orfB	complement(4524649..4525362)	Shigella flexneri 2a str. 2457T	1080830
NP_839749.1	CDS	S4632	NC_004741.1	4525503	4525805	R	residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAL72452.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; IS600 orfA	complement(4525503..4525805)	Shigella flexneri 2a str. 2457T	1080831
NP_839750.1	CDS	S4633	NC_004741.1	4525870	4526190	D	residues 1 to 106 of 106 are 98.11 pct identical to residues 282 to 387 of 387 from GenPept : >gb|AAG59527.1|AE005665_9 (AE005665) orf; conserved hypothetical protein [Escherichia coli O157:H7 EDL933]; hypothetical protein	4525870..4526190	Shigella flexneri 2a str. 2457T	1080832
NP_839751.1	CDS	S4635	NC_004741.1	4526799	4528454	R	residues 1 to 551 of 551 are 51.70 pct identical to residues 1 to 584 of 584 from GenPept : >gb|AAG59529.1|AE005666_1 (AE005666)  restriction modification enzyme S subunit [Escherichia coli O157:H7 EDL933]; hypothetical protein	complement(4526799..4528454)	Shigella flexneri 2a str. 2457T	1080834
NP_839752.1	CDS	S4638	NC_004741.1	4532719	4532994	D	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	4532719..4532994	Shigella flexneri 2a str. 2457T	1080837
NP_839753.1	CDS	S4639	NC_004741.1	4532913	4533416	D	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri]; IS1 orfB	4532913..4533416	Shigella flexneri 2a str. 2457T	1080838
NP_839754.1	CDS	yjiA	NC_004741.1	4534262	4535116	R	residues 1 to 284 of 284 are 93.66 pct identical to residues 1 to 284 of 284 from Escherichia coli K-12 : B4352; GTP-binding protein YjiA	complement(4534262..4535116)	Shigella flexneri 2a str. 2457T	1080839
NP_839755.1	CDS	yjiX	NC_004741.1	4535229	4535432	R	residues 1 to 67 of 67 are 100.00 pct identical to residues 1 to 67 of 67 from Escherichia coli K-12 : B4353; hypothetical protein	complement(4535229..4535432)	Shigella flexneri 2a str. 2457T	1080840
NP_839756.1	CDS	yjiY	NC_004741.1	4535482	4537647	R	residues 1 to 721 of 721 are 87.65 pct identical to residues 1 to 721 of 721 from Escherichia coli K-12 : B4354; carbon starvation protein	complement(4535482..4537647)	Shigella flexneri 2a str. 2457T	1080841
NP_839757.1	CDS	hpaC	NC_004741.1	4538025	4538537	R	residues 1 to 170 of 170 are 99.41 pct identical to residues 1 to 170 of 170 from GenPept : >emb|CAA86049.2| (Z37980) component C of the 4HPA-hydroxylase [Escherichia coli]; component C of the 4HPA-hydroxylase	complement(4538025..4538537)	Shigella flexneri 2a str. 2457T	1080842
NP_839758.1	CDS	S4646	NC_004741.1	4540366	4541133	R	residues 2 to 243 of 255 are 83.47 pct identical to residues 53 to 294 of 312 from GenPept : >emb|CAD08235.1| (AL627269) hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi]; hypothetical protein	complement(4540366..4541133)	Shigella flexneri 2a str. 2457T	1080844
NP_839759.1	CDS	hpaA	NC_004741.1	4541304	4542194	R	residues 13 to 296 of 296 are 59.85 pct identical to residues 8 to 291 of 298 from GenPept : >gb|AAL20040.1| (AE008748) 4-hydroxyphenylacetate catabolism [Salmonella typhimurium LT2]; 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein	complement(4541304..4542194)	Shigella flexneri 2a str. 2457T	1080845
NP_839760.1	CDS	hpaX	NC_004741.1	4542204	4543559	R	residues 17 to 434 of 451 are 66.58 pct identical to residues 25 to 446 of 455 from GenPept : >emb|CAC90586.1| (AJ414150)  4-hydroxyphenylacetate permease [Yersinia pestis]; 4-hydroxyphenylacetate permease	complement(4542204..4543559)	Shigella flexneri 2a str. 2457T	1079519
NP_839761.1	CDS	hpaI	NC_004741.1	4543581	4544384	R	residues 1 to 251 of 267 are 94.02 pct identical to residues 1 to 251 of 262 from GenPept : >emb|CAA86045.1| (Z37980) hypothetical 2,4-dihydroxy-hepta-2-ene-1,7-dioate aldolase [Escherichia coli]; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase	complement(4543581..4544384)	Shigella flexneri 2a str. 2457T	1080846
NP_839762.1	CDS	hpaH	NC_004741.1	4544395	4545198	R	residues 1 to 267 of 267 are 98.87 pct identical to residues 1 to 267 of 267 from GenPept : >emb|CAA86044.1| (Z37980) 2-oxo-hept-3-ene-1,7-dioate hydratase [Escherichia coli]; 2-oxo-hepta-3-ene-1,7-dioic acid hydratase	complement(4544395..4545198)	Shigella flexneri 2a str. 2457T	1080847
NP_839763.1	CDS	hpaF	NC_004741.1	4545266	4545646	R	residues 1 to 126 of 126 are 88.09 pct identical to residues 1 to 126 of 126 from GenPept : >emb|CAD08230.1| (AL627269) 5-carboxymethyl-2-hydroxymuconate delta-isomerase [Salmonella enterica subsp. enterica serovar Typhi]; 5-carboxymethyl-2-hydroxymuconate delta-isomerase	complement(4545266..4545646)	Shigella flexneri 2a str. 2457T	1080848
NP_839764.1	CDS	hpaD	NC_004741.1	4545656	4546507	R	residues 1 to 283 of 283 are 99.64 pct identical to residues 1 to 283 of 283 from GenPept : >emb|CAA86042.1| (Z37980) homoprotocatechuate dyoxygenase [Escherichia coli]; homoprotocatechuate dyoxygenase	complement(4545656..4546507)	Shigella flexneri 2a str. 2457T	1080849
NP_839765.1	CDS	hpaE	NC_004741.1	4546509	4547975	R	residues 1 to 488 of 488 are 99.18 pct identical to residues 1 to 488 of 488 from GenPept : >emb|CAA86041.1| (Z37980) 5-carboxy-2-hydroxymuconate semialdehyde dehydrogenase [Escherichia coli]; 5-carboxy-2-hydroxymuconate semialdehyde dehydrogenase	complement(4546509..4547975)	Shigella flexneri 2a str. 2457T	1080850
NP_839766.1	CDS	hpaG	NC_004741.1	4547972	4549261	R	residues 1 to 429 of 429 are 95.80 pct identical to residues 1 to 429 of 429 from GenPept : >emb|CAA86040.1| (Z37980) 5-oxo-1,2,5-tricarboxilic-3-penten acid decarboxilase/isomer [Escherichia coli]; 5-oxo-1,2,5-tricarboxilic-3-penten acid decarboxilase/isomerase	complement(4547972..4549261)	Shigella flexneri 2a str. 2457T	1080852
NP_839767.1	CDS	hpcR	NC_004741.1	4549533	4549979	D	residues 1 to 148 of 148 are 100.00 pct identical to residues 1 to 148 of 148 from GenPept : >emb|CAA86039.1| (Z37980) regulator of the meta operon of 3,4dhpa metabolic pathway [Escherichia coli]; regulator of the 4HPA-hydroxylase operon	4549533..4549979	Shigella flexneri 2a str. 2457T	1080853
NP_839768.1	CDS	tsr	NC_004741.1	4550098	4551762	D	residues 1 to 554 of 554 are 88.08 pct identical to residues 1 to 551 of 551 from Escherichia coli K-12 : B4355; methyl-accepting chemotaxis protein I, serine sensor receptor	4550098..4551762	Shigella flexneri 2a str. 2457T	1080854
NP_839769.1	CDS	yjiZ	NC_004741.1	4551811	4553172	R	residues 1 to 453 of 453 are 98.89 pct identical to residues 1 to 453 of 453 from Escherichia coli K-12 : B4356; joins former yjiZ and yjjL; transporter	complement(4551811..4553172)	Shigella flexneri 2a str. 2457T	1080855
NP_839770.1	CDS	yjjM	NC_004741.1	4553387	4554193	R	residues 1 to 268 of 268 are 98.50 pct identical to residues 1 to 268 of 268 from Escherichia coli K-12 : B4357; hypothetical protein	complement(4553387..4554193)	Shigella flexneri 2a str. 2457T	1080856
NP_839771.2	CDS	mdoB	NC_004741.1	4555600	4557891	R	catalyzes the transfer of phosphoglycerol to the glucan backbone; phosphoglycerol transferase I	complement(4555600..4557891)	Shigella flexneri 2a str. 2457T	1080858
NP_839772.1	CDS	yjjA	NC_004741.1	4558145	4558642	R	residues 1 to 165 of 165 are 91.51 pct identical to residues 1 to 165 of 165 from Escherichia coli K-12 : B4360; hypothetical protein	complement(4558145..4558642)	Shigella flexneri 2a str. 2457T	1080859
NP_839773.1	CDS	dnaC	NC_004741.1	4558688	4559425	R	acts to load the DnaB helicase onto the initiation site during DNA replication; DNA replication protein DnaC	complement(4558688..4559425)	Shigella flexneri 2a str. 2457T	1080860
NP_839774.1	CDS	dnaT	NC_004741.1	4559428	4559967	R	This protein is required for primosome-dependent normal DNA replication; it is also involved in inducing stable DNA replication during SOS response. It forms, in concert with dnaB protein and other prepriming proteins dnaC, N, N', N'' a prepriming protein complex on the specific site of the template DNA recognized by protein N'; primosomal protein DnaI	complement(4559428..4559967)	Shigella flexneri 2a str. 2457T	1080861
NP_839775.2	CDS	yjjB	NC_004741.1	4560074	4560547	R	residues 1 to 108 of 108 are 99.07 pct identical to residues 1 to 108 of 108 from Escherichia coli K-12 : B4363; hypothetical protein	complement(4560074..4560547)	Shigella flexneri 2a str. 2457T	1080862
NP_839776.1	CDS	S4666	NC_004741.1	4561932	4562207	D	residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]; IS1 orfA	4561932..4562207	Shigella flexneri 2a str. 2457T	1077773
NP_839777.1	CDS	S4667	NC_004741.1	4562126	4562629	D	residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri]; IS1 orfB	4562126..4562629	Shigella flexneri 2a str. 2457T	1080864
NP_839778.2	CDS	bglJ	NC_004741.1	4563227	4563850	D	regulator for the transport and utilization of the aromatic beta-glucosides arbutin and silicin; DNA-binding transcriptional activator BglJ	4563227..4563850	Shigella flexneri 2a str. 2457T	1080866
NP_839779.1	CDS	fhuF	NC_004741.1	4563888	4564676	R	residues 1 to 262 of 262 are 97.32 pct identical to residues 1 to 262 of 262 from Escherichia coli K-12 : B4367; ferric iron reductase involved in ferric hydroximate transport	complement(4563888..4564676)	Shigella flexneri 2a str. 2457T	1080867
NP_839780.1	CDS	rsmC	NC_004741.1	4565691	4566722	R	16S rRNA M2G1207 methyltransferase; one of many enzymes that modify bases of the ribosomal RNA; this enzyme methylates the G at position 1207 of the small ribosomal subunit; 16S ribosomal RNA m2G1207 methyltransferase	complement(4565691..4566722)	Shigella flexneri 2a str. 2457T	1080871
NP_839781.1	CDS	holD	NC_004741.1	4566825	4567238	D	with the chi subunit binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB; DNA polymerase III subunit psi	4566825..4567238	Shigella flexneri 2a str. 2457T	1080873
NP_839782.1	CDS	rimI	NC_004741.1	4567207	4567653	D	alanine acetyltransferase that specifically acetylates ribosomal protein S18; ribosomal-protein-alanine N-acetyltransferase	4567207..4567653	Shigella flexneri 2a str. 2457T	1080874
NP_839783.1	CDS	yjjG	NC_004741.1	4567668	4568345	D	manganese-dependent 5'-nucleotidase; specific for 5'-UMP, 5'-dUMP, and 5'-dTMP; member of haloacid dehalogenase (HAD)-like hydrolase superfamily; nucleotidase	4567668..4568345	Shigella flexneri 2a str. 2457T	1080875
NP_839784.1	CDS	prfC	NC_004741.1	4568436	4570025	D	stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein; peptide chain release factor 3	4568436..4570025	Shigella flexneri 2a str. 2457T	1080876
NP_839785.1	CDS	osmY	NC_004741.1	4570418	4571023	D	residues 1 to 201 of 201 are 99.50 pct identical to residues 1 to 201 of 201 from Escherichia coli K-12 : B4376; periplasmic protein	4570418..4571023	Shigella flexneri 2a str. 2457T	1080877
NP_839786.1	CDS	yjjU	NC_004741.1	4571423	4572496	D	residues 1 to 357 of 357 are 99.71 pct identical to residues 1 to 357 of 357 from Escherichia coli K-12 : B4377; hypothetical protein	4571423..4572496	Shigella flexneri 2a str. 2457T	1080878
NP_839787.1	CDS	yjjV	NC_004741.1	4572637	4573275	D	residues 1 to 210 of 212 are 95.71 pct identical to residues 1 to 210 of 211 from Escherichia coli K-12 : B4378; hypothetical protein	4572637..4573275	Shigella flexneri 2a str. 2457T	1080879
NP_839788.1	CDS	yjjW	NC_004741.1	4573489	4574352	R	residues 1 to 287 of 287 are 99.30 pct identical to residues 1 to 287 of 287 from Escherichia coli K-12 : B4379; activating enzyme	complement(4573489..4574352)	Shigella flexneri 2a str. 2457T	1080880
NP_839789.1	CDS	yjjI	NC_004741.1	4574324	4575865	R	residues 1 to 513 of 513 are 99.22 pct identical to residues 1 to 516 of 516 from Escherichia coli K-12 : B4380; hypothetical protein	complement(4574324..4575865)	Shigella flexneri 2a str. 2457T	1080881
NP_839790.1	CDS	deoC	NC_004741.1	4576123	4576902	D	catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase	4576123..4576902	Shigella flexneri 2a str. 2457T	1080882
NP_839791.1	CDS	deoA	NC_004741.1	4577029	4578351	D	Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate; thymidine phosphorylase	4577029..4578351	Shigella flexneri 2a str. 2457T	1080883
NP_839792.1	CDS	deoB	NC_004741.1	4578404	4579627	D	catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose; phosphopentomutase	4578404..4579627	Shigella flexneri 2a str. 2457T	1080884
NP_839793.1	CDS	deoD	NC_004741.1	4579684	4580403	D	catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate; purine nucleoside phosphorylase	4579684..4580403	Shigella flexneri 2a str. 2457T	1080885
NP_839794.1	CDS	S4688	NC_004741.1	4580564	4580827	R	residues 1 to 87 of 87 are 100.00 pct identical to residues 1 to 87 of 87 from GenPept : >gb|AAG59566.1|AE005669_10 (AE005669) Z5987 gene product [Escherichia coli O157:H7 EDL933]; hypothetical protein	complement(4580564..4580827)	Shigella flexneri 2a str. 2457T	1080886
NP_839795.1	CDS	smp	NC_004741.1	4581902	4582546	R	residues 1 to 200 of 214 are 95.49 pct identical to residues 1 to 200 of 214 from Escherichia coli K-12 : B4387; hypothetical protein	complement(4581902..4582546)	Shigella flexneri 2a str. 2457T	1080888
NP_839796.1	CDS	serB	NC_004741.1	4582652	4583620	D	catalyzes the formation of serine from O-phosphoserine; phosphoserine phosphatase	4582652..4583620	Shigella flexneri 2a str. 2457T	1080889
NP_839797.1	CDS	sms	NC_004741.1	4583669	4585051	D	Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA	4583669..4585051	Shigella flexneri 2a str. 2457T	1080890
NP_839798.2	CDS	nadR	NC_004741.1	4585072	4586304	D	catalyzes the formation of NAD(+) from nicotinamide ribonucleotide; nicotinamide-nucleotide adenylyltransferase	4585072..4586304	Shigella flexneri 2a str. 2457T	1080891
NP_839799.1	CDS	yjjK	NC_004741.1	4586612	4588279	R	ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; ABC transporter ATP-binding protein	complement(4586612..4588279)	Shigella flexneri 2a str. 2457T	1077709
NP_839800.2	CDS	slt	NC_004741.1	4588490	4590427	D	catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine residues in peptidoglycan; lytic murein transglycosylase	4588490..4590427	Shigella flexneri 2a str. 2457T	1080892
NP_839801.1	CDS	trpR	NC_004741.1	4590517	4590843	D	When complexed with L-tryptophan it binds the operator region of the trp operon and prevents the initiation of transcription; Trp operon repressor	4590517..4590843	Shigella flexneri 2a str. 2457T	1080894
NP_839802.1	CDS	gpmB	NC_004741.1	4591500	4592147	D	catalyzes reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate; phosphoglycerate mutase	4591500..4592147	Shigella flexneri 2a str. 2457T	1078078
NP_839803.1	CDS	rob	NC_004741.1	4592144	4593013	R	residues 1 to 289 of 289 are 100.00 pct identical to residues 1 to 289 of 289 from Escherichia coli K-12 : B4396; right origin-binding protein	complement(4592144..4593013)	Shigella flexneri 2a str. 2457T	1080895
NP_839804.1	CDS	creA	NC_004741.1	4593224	4593697	D	residues 1 to 157 of 157 are 100.00 pct identical to residues 1 to 157 of 157 from Escherichia coli K-12 : B4397; hypothetical protein	4593224..4593697	Shigella flexneri 2a str. 2457T	1080925
NP_839805.1	CDS	creB	NC_004741.1	4593710	4594399	D	response regulator in two-component regulatory system with CreC; CreB protein is phosphorylated by sensor protein phospho-CreC; involved in catabolic regulation; DNA-binding response regulator CreB	4593710..4594399	Shigella flexneri 2a str. 2457T	1080896
NP_839806.1	CDS	creC	NC_004741.1	4594399	4595823	D	part of a two-component regulatory system with CreB or PhoB; involved in catabolic regulation; sensory histidine kinase CreC	4594399..4595823	Shigella flexneri 2a str. 2457T	1080897
NP_839807.1	CDS	creD	NC_004741.1	4595881	4597233	D	residues 1 to 450 of 450 are 94.88 pct identical to residues 1 to 450 of 450 from Escherichia coli K-12 : B4400; tolerance to colicin E2; hypothetical protein	4595881..4597233	Shigella flexneri 2a str. 2457T	1080898
NP_839808.1	CDS	arcA	NC_004741.1	4597292	4598008	R	residues 1 to 238 of 238 are 100.00 pct identical to residues 1 to 238 of 238 from Escherichia coli K-12 : B4401; two-component response regulator	complement(4597292..4598008)	Shigella flexneri 2a str. 2457T	1080899
NP_839809.1	CDS	yjjY	NC_004741.1	4598104	4598244	D	residues 1 to 46 of 46 are 100.00 pct identical to residues 1 to 46 of 46 from Escherichia coli K-12 : B4402; hypothetical protein	4598104..4598244	Shigella flexneri 2a str. 2457T	1080900
NP_839810.1	CDS	lasT	NC_004741.1	4598644	4599330	D	member of the SPOUT superfamily of methyltransferases; RNA methyltransferase	4598644..4599330	Shigella flexneri 2a str. 2457T	1080901
S0195	tRNA	ileV	NC_004741.1	215765	215841	D	tRNA-Ile	215765..215841	Shigella flexneri 2a str. 2457T	1076626
S0196	tRNA	alaV	NC_004741.1	215884	215959	D	tRNA-Ala	215884..215959	Shigella flexneri 2a str. 2457T	1076619
S0199	tRNA	aspU	NC_004741.1	219312	219388	D	tRNA-Asp	219312..219388	Shigella flexneri 2a str. 2457T	1077574
S0210	tRNA	aspV	NC_004741.1	228962	229038	D	tRNA-Asp	228962..229038	Shigella flexneri 2a str. 2457T	1076641
S0315	tRNA	thrW	NC_004741.1	313753	313828	D	tRNA-Thr	313753..313828	Shigella flexneri 2a str. 2457T	1076745
S0474	tRNA	argU	NC_004741.1	479736	479812	D	tRNA-Arg	479736..479812	Shigella flexneri 2a str. 2457T	1076914
S0563	tRNA	lysY	NC_004741.1	572230	572305	R	tRNA-Lys	complement(572230..572305)	Shigella flexneri 2a str. 2457T	1076999
S0564	tRNA	valZ	NC_004741.1	572309	572384	R	tRNA-Val	complement(572309..572384)	Shigella flexneri 2a str. 2457T	1077002
S0565	tRNA	lysW	NC_004741.1	572436	572511	R	tRNA-Lys	complement(572436..572511)	Shigella flexneri 2a str. 2457T	1077003
S0566	tRNA	valT	NC_004741.1	572514	572589	R	tRNA-Val	complement(572514..572589)	Shigella flexneri 2a str. 2457T	1080354
S0567	tRNA	lysT	NC_004741.1	572725	572800	R	tRNA-Lys	complement(572725..572800)	Shigella flexneri 2a str. 2457T	1077004
S0631	tRNA	metT	NC_004741.1	650819	650895	D	tRNA-Met	650819..650895	Shigella flexneri 2a str. 2457T	1077061
S0632	tRNA	leuW	NC_004741.1	650904	650988	D	tRNA-Leu	650904..650988	Shigella flexneri 2a str. 2457T	1077062
S0634	tRNA	glnU	NC_004741.1	651012	651086	D	tRNA-Gln	651012..651086	Shigella flexneri 2a str. 2457T	1077063
S0636	tRNA	glnW	NC_004741.1	651121	651195	D	tRNA-Gln	651121..651195	Shigella flexneri 2a str. 2457T	1077064
S0637	tRNA	metU	NC_004741.1	651211	651287	D	tRNA-Met	651211..651287	Shigella flexneri 2a str. 2457T	1077065
S0639	tRNA	glnV	NC_004741.1	651336	651410	D	tRNA-Gln	651336..651410	Shigella flexneri 2a str. 2457T	1077067
S0640	tRNA	glnX	NC_004741.1	651448	651522	D	tRNA-Gln	651448..651522	Shigella flexneri 2a str. 2457T	1077068
S0710	tRNA	S0710	NC_004741.1	709308	709384	D	tRNA-Ile	709308..709384	Shigella flexneri 2a str. 2457T	1077135
S0711	tRNA	S0711	NC_004741.1	709386	709462	D	tRNA-Arg	709386..709462	Shigella flexneri 2a str. 2457T	1077136
S0712	tRNA	S0712	NC_004741.1	709465	709539	D	tRNA-Thr	709465..709539	Shigella flexneri 2a str. 2457T	1077137
S0713	tRNA	S0713	NC_004741.1	709543	709617	D	tRNA-Gly	709543..709617	Shigella flexneri 2a str. 2457T	1077138
S0727	tRNA	S0727	NC_004741.1	718318	718394	D	tRNA-Ile	718318..718394	Shigella flexneri 2a str. 2457T	1077150
S0728	tRNA	S0728	NC_004741.1	718396	718472	D	tRNA-Arg	718396..718472	Shigella flexneri 2a str. 2457T	1077151
S0729	tRNA	S0729	NC_004741.1	718475	718550	D	tRNA-Thr	718475..718550	Shigella flexneri 2a str. 2457T	1077152
S0730	tRNA	S0730	NC_004741.1	718554	718628	D	tRNA-Gly	718554..718628	Shigella flexneri 2a str. 2457T	1077153
S0883	tRNA	serW	NC_004741.1	872069	872156	R	tRNA-Ser	complement(872069..872156)	Shigella flexneri 2a str. 2457T	1077298
S1039	tRNA	serT	NC_004741.1	1023509	1023596	R	tRNA-Ser	complement(1023509..1023596)	Shigella flexneri 2a str. 2457T	1077441
S1099	tRNA	serX	NC_004741.1	1076674	1076761	R	tRNA-Ser	complement(1076674..1076761)	Shigella flexneri 2a str. 2457T	1077497
S1317	tRNA	tyrT	NC_004741.1	1282470	1282554	R	tRNA-Tyr	complement(1282470..1282554)	Shigella flexneri 2a str. 2457T	1077688
S1662	tRNA	S1662	NC_004741.1	1616401	1616477	R	tRNA-Arg	complement(1616401..1616477)	Shigella flexneri 2a str. 2457T	1078054
S1663	tRNA	S1663	NC_004741.1	1616579	1616654	R	tRNA-Ile	complement(1616579..1616654)	Shigella flexneri 2a str. 2457T	1078196
S1825	tRNA	valV	NC_004741.1	1765714	1765790	D	tRNA-Val	1765714..1765790	Shigella flexneri 2a str. 2457T	1078159
S1826	tRNA	valW	NC_004741.1	1765795	1765871	D	tRNA-Val	1765795..1765871	Shigella flexneri 2a str. 2457T	1078162
S1982	tRNA	S1982	NC_004741.1	1914353	1914427	R	tRNA-Gly	complement(1914353..1914427)	Shigella flexneri 2a str. 2457T	1078309
S1983	tRNA	S1983	NC_004741.1	1914431	1914506	R	tRNA-Thr	complement(1914431..1914506)	Shigella flexneri 2a str. 2457T	1078310
S1984	tRNA	S1984	NC_004741.1	1914509	1914585	R	tRNA-Arg	complement(1914509..1914585)	Shigella flexneri 2a str. 2457T	1078312
S1985	tRNA	S1985	NC_004741.1	1914587	1914662	R	tRNA-Ile	complement(1914587..1914662)	Shigella flexneri 2a str. 2457T	1078113
S2048	tRNA	leuZ	NC_004741.1	1964753	1964839	R	tRNA-Leu	complement(1964753..1964839)	Shigella flexneri 2a str. 2457T	1078366
S2049	tRNA	cysT	NC_004741.1	1964852	1964925	R	tRNA-Cys	complement(1964852..1964925)	Shigella flexneri 2a str. 2457T	1078367
S2050	tRNA	glyW	NC_004741.1	1964980	1965055	R	tRNA-Gly	complement(1964980..1965055)	Shigella flexneri 2a str. 2457T	1078368
S2137a	tRNA	S2137a	NC_004741.1	2036237	2036308	R	tRNA-Gly	complement(2036237..2036308)	Shigella flexneri 2a str. 2457T	6372719
S2137	tRNA	S2137	NC_004741.1	2036312	2036387	R	tRNA-Thr	complement(2036312..2036387)	Shigella flexneri 2a str. 2457T	1076771
S2138	tRNA	S2138	NC_004741.1	2036468	2036543	R	tRNA-Ile	complement(2036468..2036543)	Shigella flexneri 2a str. 2457T	1079024
S2147	tRNA	S2147	NC_004741.1	2041762	2041851	R	tRNA-Ser	complement(2041762..2041851)	Shigella flexneri 2a str. 2457T	1078456
S2149	tRNA	S2149	NC_004741.1	2042843	2042918	D	tRNA-Asn	2042843..2042918	Shigella flexneri 2a str. 2457T	1078457
S2162	tRNA	asnW	NC_004741.1	2050720	2050795	R	tRNA-Asn	complement(2050720..2050795)	Shigella flexneri 2a str. 2457T	1078467
S2164	tRNA	asnU	NC_004741.1	2052528	2052603	D	tRNA-Asn	2052528..2052603	Shigella flexneri 2a str. 2457T	1078470
S2167	tRNA	asnV	NC_004741.1	2054938	2055013	D	tRNA-Asn	2054938..2055013	Shigella flexneri 2a str. 2457T	1078473
S2405	tRNA	proL	NC_004741.1	2288868	2288944	D	tRNA-Pro	2288868..2288944	Shigella flexneri 2a str. 2457T	1078696
S2561	tRNA	argW	NC_004741.1	2454726	2454800	D	tRNA-Arg	2454726..2454800	Shigella flexneri 2a str. 2457T	1078843
S2601	tRNA	alaX	NC_004741.1	2497591	2497666	R	tRNA-Ala	complement(2497591..2497666)	Shigella flexneri 2a str. 2457T	1078873
S2602	tRNA	alaW	NC_004741.1	2497706	2497781	R	tRNA-Ala	complement(2497706..2497781)	Shigella flexneri 2a str. 2457T	1078874
S2606	tRNA	valX	NC_004741.1	2500481	2500556	D	tRNA-Val	2500481..2500556	Shigella flexneri 2a str. 2457T	1078878
S2607	tRNA	valY	NC_004741.1	2500601	2500676	D	tRNA-Val	2500601..2500676	Shigella flexneri 2a str. 2457T	1078879
S2608	tRNA	lysV	NC_004741.1	2500681	2500756	D	tRNA-Lys	2500681..2500756	Shigella flexneri 2a str. 2457T	1078880
S2825	tRNA	gltW	NC_004741.1	2719865	2719940	R	tRNA-Glu	complement(2719865..2719940)	Shigella flexneri 2a str. 2457T	1079089
S2864	tRNA	ileY	NC_004741.1	2753003	2753078	R	tRNA-Ile	complement(2753003..2753078)	Shigella flexneri 2a str. 2457T	1079129
S2905	tRNA	argQ	NC_004741.1	2786184	2786260	R	tRNA-Arg	complement(2786184..2786260)	Shigella flexneri 2a str. 2457T	1079170
S2906	tRNA	argZ	NC_004741.1	2786325	2786401	R	tRNA-Arg	complement(2786325..2786401)	Shigella flexneri 2a str. 2457T	1079171
S2907	tRNA	argY	NC_004741.1	2786466	2786542	R	tRNA-Arg	complement(2786466..2786542)	Shigella flexneri 2a str. 2457T	1079172
S2908	tRNA	argV	NC_004741.1	2786607	2786683	R	tRNA-Arg	complement(2786607..2786683)	Shigella flexneri 2a str. 2457T	1079173
S2909	tRNA	serV	NC_004741.1	2786687	2786779	R	tRNA-Ser	complement(2786687..2786779)	Shigella flexneri 2a str. 2457T	1079174
S3023	tRNA	metZ	NC_004741.1	2902512	2902588	D	tRNA-Met	2902512..2902588	Shigella flexneri 2a str. 2457T	1077625
S3024	tRNA	metW	NC_004741.1	2902622	2902698	D	tRNA-Met	2902622..2902698	Shigella flexneri 2a str. 2457T	1079292
S3066	tRNA	glyU	NC_004741.1	2951077	2951150	R	tRNA-Gly	complement(2951077..2951150)	Shigella flexneri 2a str. 2457T	1078678
S3167	tRNA	pheV	NC_004741.1	3044640	3044715	D	tRNA-Phe	3044640..3044715	Shigella flexneri 2a str. 2457T	1079432
S3316	tRNA	ileX	NC_004741.1	3194737	3194812	D	tRNA-Ile	3194737..3194812	Shigella flexneri 2a str. 2457T	1079558
S3429	tRNA	metY	NC_004741.1	3301512	3301588	R	tRNA-Met	complement(3301512..3301588)	Shigella flexneri 2a str. 2457T	1079666
S3432	tRNA	leuU	NC_004741.1	3305372	3305458	R	tRNA-Leu	complement(3305372..3305458)	Shigella flexneri 2a str. 2457T	1079669
S3529	tRNA	thrV	NC_004741.1	3396538	3396613	R	tRNA-Thr	complement(3396538..3396613)	Shigella flexneri 2a str. 2457T	1079754
S3532	tRNA	alaU	NC_004741.1	3399926	3400001	R	tRNA-Ala	complement(3399926..3400001)	Shigella flexneri 2a str. 2457T	1079756
S3533	tRNA	ileU	NC_004741.1	3400044	3400120	R	tRNA-Ile	complement(3400044..3400120)	Shigella flexneri 2a str. 2457T	1078200
S3655	tRNA	gltV	NC_004741.1	3544410	3544485	R	tRNA-Glu	complement(3544410..3544485)	Shigella flexneri 2a str. 2457T	1079875
S3683	tRNA	thrT	NC_004741.1	3577637	3577712	R	tRNA-Thr	complement(3577637..3577712)	Shigella flexneri 2a str. 2457T	1080790
S3684	tRNA	glyT	NC_004741.1	3577719	3577793	R	tRNA-Gly	complement(3577719..3577793)	Shigella flexneri 2a str. 2457T	1079901
S3685	tRNA	tyrU	NC_004741.1	3577910	3577994	R	tRNA-Tyr	complement(3577910..3577994)	Shigella flexneri 2a str. 2457T	1080920
S3686	tRNA	thrU	NC_004741.1	3578003	3578078	R	tRNA-Thr	complement(3578003..3578078)	Shigella flexneri 2a str. 2457T	1079903
S3693	tRNA	gltT	NC_004741.1	3584846	3584921	R	tRNA-Glu	complement(3584846..3584921)	Shigella flexneri 2a str. 2457T	1079911
S3823	tRNA	alaT	NC_004741.1	3723026	3723101	R	tRNA-Ala	complement(3723026..3723101)	Shigella flexneri 2a str. 2457T	1080039
S3824	tRNA	ileT	NC_004741.1	3723144	3723220	R	tRNA-Ile	complement(3723144..3723220)	Shigella flexneri 2a str. 2457T	1080040
S3886	tRNA	proM	NC_004741.1	3781918	3781994	R	tRNA-Pro	complement(3781918..3781994)	Shigella flexneri 2a str. 2457T	1080104
S3887	tRNA	leuT	NC_004741.1	3782037	3782123	R	tRNA-Leu	complement(3782037..3782123)	Shigella flexneri 2a str. 2457T	1080105
S3888	tRNA	hisR	NC_004741.1	3782144	3782219	R	tRNA-His	complement(3782144..3782219)	Shigella flexneri 2a str. 2457T	1080107
S3889	tRNA	argX	NC_004741.1	3782278	3782354	R	tRNA-Arg	complement(3782278..3782354)	Shigella flexneri 2a str. 2457T	1080108
S3923	tRNA	trpT	NC_004741.1	3816778	3816853	R	tRNA-Trp	complement(3816778..3816853)	Shigella flexneri 2a str. 2457T	1080136
S3924	tRNA	aspT	NC_004741.1	3816862	3816938	R	tRNA-Asp	complement(3816862..3816938)	Shigella flexneri 2a str. 2457T	1080137
S3927	tRNA	gltU	NC_004741.1	3820301	3820376	R	tRNA-Glu	complement(3820301..3820376)	Shigella flexneri 2a str. 2457T	1080140
S4071	tRNA	selC	NC_004741.1	3968763	3968853	R	tRNA-Sec	complement(3968763..3968853)	Shigella flexneri 2a str. 2457T	1080278
S4190	tRNA	proK	NC_004741.1	4095462	4095538	D	tRNA-Pro	4095462..4095538	Shigella flexneri 2a str. 2457T	1080396
S4485	tRNA	leuX	NC_004741.1	4388344	4388428	R	tRNA-Leu	complement(4388344..4388428)	Shigella flexneri 2a str. 2457T	1080690
S4555	tRNA	pheU	NC_004741.1	4458364	4458439	R	tRNA-Phe	complement(4458364..4458439)	Shigella flexneri 2a str. 2457T	1080762
S4585	tRNA	glyV	NC_004741.1	4489107	4489182	D	tRNA-Gly	4489107..4489182	Shigella flexneri 2a str. 2457T	1080954
S4586	tRNA	glyX	NC_004741.1	4489340	4489415	D	tRNA-Gly	4489340..4489415	Shigella flexneri 2a str. 2457T	1080947
S4587	tRNA	glyY	NC_004741.1	4489451	4489526	D	tRNA-Gly	4489451..4489526	Shigella flexneri 2a str. 2457T	1080793
S4588	tRNA	S4588	NC_004741.1	4489562	4489637	D	tRNA-Gly	4489562..4489637	Shigella flexneri 2a str. 2457T	1080794
S4671	tRNA	leuV	NC_004741.1	4565093	4565179	R	tRNA-Leu	complement(4565093..4565179)	Shigella flexneri 2a str. 2457T	1080868
S4672	tRNA	leuP	NC_004741.1	4565214	4565300	R	tRNA-Leu	complement(4565214..4565300)	Shigella flexneri 2a str. 2457T	1080869
S4673	tRNA	leuQ	NC_004741.1	4565329	4565415	R	tRNA-Leu	complement(4565329..4565415)	Shigella flexneri 2a str. 2457T	1080870
S0194	rRNA	rrsH	NC_004741.1	214156	215696	D	16S ribosomal RNA	214156..215696	Shigella flexneri 2a str. 2457T	1076624
S0197	rRNA	rrlH	NC_004741.1	216143	219046	D	23S ribosomal RNA	216143..219046	Shigella flexneri 2a str. 2457T	1077820
S0198	rRNA	rrfH	NC_004741.1	219141	219259	D	5S ribosomal RNA	219141..219259	Shigella flexneri 2a str. 2457T	1076628
S2823	rRNA	rrfG	NC_004741.1	2716555	2716673	R	5S ribosomal RNA	complement(2716555..2716673)	Shigella flexneri 2a str. 2457T	1079087
S2824	rRNA	rrlG	NC_004741.1	2716768	2719671	R	23S ribosomal RNA	complement(2716768..2719671)	Shigella flexneri 2a str. 2457T	1079088
S2826	rRNA	rrsG	NC_004741.1	2720026	2721566	R	16S ribosomal RNA	complement(2720026..2721566)	Shigella flexneri 2a str. 2457T	1079090
S3528	rRNA	rrfF	NC_004741.1	3396385	3396497	R	5S ribosomal RNA	complement(3396385..3396497)	Shigella flexneri 2a str. 2457T	1079753
S3530	rRNA	rrfD	NC_004741.1	3396626	3396744	R	5S ribosomal RNA	complement(3396626..3396744)	Shigella flexneri 2a str. 2457T	1079755
S3531	rRNA	rrlD	NC_004741.1	3396839	3399742	R	23S ribosomal RNA	complement(3396839..3399742)	Shigella flexneri 2a str. 2457T	1080904
S3534	rRNA	rrsD	NC_004741.1	3400189	3401730	R	16S ribosomal RNA	complement(3400189..3401730)	Shigella flexneri 2a str. 2457T	1079757
S3653	rRNA	rrfE	NC_004741.1	3541100	3541218	R	5S ribosomal RNA	complement(3541100..3541218)	Shigella flexneri 2a str. 2457T	1079873
S3654	rRNA	rrlE	NC_004741.1	3541313	3544216	R	23S ribosomal RNA	complement(3541313..3544216)	Shigella flexneri 2a str. 2457T	1079874
S3656	rRNA	rrsE	NC_004741.1	3544571	3546112	R	16S ribosomal RNA	complement(3544571..3546112)	Shigella flexneri 2a str. 2457T	1079876
S3691	rRNA	rrfB	NC_004741.1	3581536	3581654	R	5S ribosomal RNA	complement(3581536..3581654)	Shigella flexneri 2a str. 2457T	1079908
S3692	rRNA	rrlB	NC_004741.1	3581749	3584652	R	23S ribosomal RNA	complement(3581749..3584652)	Shigella flexneri 2a str. 2457T	1079909
S3694	rRNA	rrsB	NC_004741.1	3585007	3586548	R	16S ribosomal RNA	complement(3585007..3586548)	Shigella flexneri 2a str. 2457T	1079912
S3821	rRNA	rrfA	NC_004741.1	3719726	3719844	R	5S ribosomal RNA	complement(3719726..3719844)	Shigella flexneri 2a str. 2457T	1080036
S3822	rRNA	rrlA	NC_004741.1	3719939	3722842	R	23S ribosomal RNA	complement(3719939..3722842)	Shigella flexneri 2a str. 2457T	1080037
S3825	rRNA	rrsA	NC_004741.1	3723289	3724830	R	16S ribosomal RNA	complement(3723289..3724830)	Shigella flexneri 2a str. 2457T	1080041
S3925	rRNA	rrfC	NC_004741.1	3816991	3817109	R	5S ribosomal RNA	complement(3816991..3817109)	Shigella flexneri 2a str. 2457T	1080138
S3926	rRNA	rrlC	NC_004741.1	3817204	3820107	R	23S ribosomal RNA	complement(3817204..3820107)	Shigella flexneri 2a str. 2457T	1080139
S3928	rRNA	rrsC	NC_004741.1	3820462	3822003	R	16S ribosomal RNA	complement(3820462..3822003)	Shigella flexneri 2a str. 2457T	1080141