-- dump date 20140620_065156 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_005711879.1 384545967 12284751 complement(191..415) 1 NC_017319.1 IS2 ORF2 415 12284751 SFxv_4830 Shigella flexneri 2002017 IS2 ORF2 YP_005711879.1 191 R 591020 CDS YP_005711880.1 384545968 12284752 485..949 1 NC_017319.1 putative resolvase 949 12284752 SFxv_4831 Shigella flexneri 2002017 putative resolvase YP_005711880.1 485 D 591020 CDS YP_005711881.1 384545969 12284753 1176..2042 1 NC_017319.1 OspB, probably secreted by the Mxi-Spa machinery 2042 ospB 12284753 ospB Shigella flexneri 2002017 OspB, probably secreted by the Mxi-Spa machinery YP_005711881.1 1176 D 591020 CDS YP_005711882.1 384545970 12284754 2371..3111 1 NC_017319.1 PhoN2 (Apy), periplasmic phosphatase, apyrase, ATP diphosphohydrolase 3111 phoN2 12284754 phoN2 Shigella flexneri 2002017 PhoN2 (Apy), periplasmic phosphatase, apyrase, ATP diphosphohydrolase YP_005711882.1 2371 D 591020 CDS YP_005711883.1 384545971 12284755 complement(3471..4745) 1 NC_017319.1 OspC4, probably secreted by the Mxi-Spa machinery 4745 ospC4 12284755 ospC4 Shigella flexneri 2002017 OspC4, probably secreted by the Mxi-Spa machinery YP_005711883.1 3471 R 591020 CDS YP_005711884.1 384545972 12284756 complement(4802..4918) 1 NC_017319.1 OspC3, probably secreted by the Mxi-Spa machinery 4918 ospC3 12284756 ospC3 Shigella flexneri 2002017 OspC3, probably secreted by the Mxi-Spa machinery YP_005711884.1 4802 R 591020 CDS YP_005711885.1 384545973 12284757 complement(5264..5758) 1 NC_017319.1 transposase,IS66 family element 5758 12284757 SFxv_4836 Shigella flexneri 2002017 transposase,IS66 family element YP_005711885.1 5264 R 591020 CDS YP_005711886.1 384545974 12284758 complement(5745..6095) 1 NC_017319.1 IS600 ORF2 6095 12284758 SFxv_4837 Shigella flexneri 2002017 IS600 ORF2 YP_005711886.1 5745 R 591020 CDS YP_005711887.1 384545975 12284759 complement(6107..6925) 1 NC_017319.1 IS600 ORF2 6925 12284759 SFxv_4838 Shigella flexneri 2002017 IS600 ORF2 YP_005711887.1 6107 R 591020 CDS YP_005711888.1 384545976 12284760 complement(6961..7263) 1 NC_017319.1 IS600 ORF2 7263 12284760 SFxv_4839 Shigella flexneri 2002017 IS600 ORF2 YP_005711888.1 6961 R 591020 CDS YP_005711889.1 384545977 12284761 complement(7435..9144) 1 NC_017319.1 OspD2, probably secreted by the Mxi-Spa machinery 9144 ospD2 12284761 ospD2 Shigella flexneri 2002017 OspD2, probably secreted by the Mxi-Spa machinery YP_005711889.1 7435 R 591020 CDS YP_005711890.1 384545978 12284762 complement(9576..10295) 1 NC_017319.1 OspF, probably secreted by the Mxi-Spa machinery 10295 ospF 12284762 ospF Shigella flexneri 2002017 OspF, probably secreted by the Mxi-Spa machinery YP_005711890.1 9576 R 591020 CDS YP_005711891.1 384545979 12284763 complement(10420..10623) 1 NC_017319.1 putative transposase 10623 12284763 SFxv_4842 Shigella flexneri 2002017 putative transposase YP_005711891.1 10420 R 591020 CDS YP_005711892.1 384545980 12284764 complement(10620..10892) 1 NC_017319.1 putative transposase 10892 12284764 SFxv_4843 Shigella flexneri 2002017 putative transposase YP_005711892.1 10620 R 591020 CDS YP_005711893.1 384545981 12284765 complement(11327..11905) 1 NC_017319.1 hypothetical protein 11905 12284765 SFxv_4844 Shigella flexneri 2002017 hypothetical protein YP_005711893.1 11327 R 591020 CDS YP_005711894.1 384545982 12284766 complement(12129..12248) 1 NC_017319.1 fragment; IS3 orf2 12248 12284766 SFxv_4845 Shigella flexneri 2002017 IS3 orf2 YP_005711894.1 12129 R 591020 CDS YP_005711895.1 384545983 12284767 complement(12871..13272) 1 NC_017319.1 IS91 ORF 13272 12284767 SFxv_4846 Shigella flexneri 2002017 IS91 ORF YP_005711895.1 12871 R 591020 CDS YP_005711896.1 384545984 12284768 complement(13227..13412) 1 NC_017319.1 putative IS91 ORF2 13412 12284768 SFxv_4847 Shigella flexneri 2002017 putative IS91 ORF2 YP_005711896.1 13227 R 591020 CDS YP_005711897.1 384545985 12284769 13575..13859 1 NC_017319.1 putative transposase 13859 12284769 SFxv_4848 Shigella flexneri 2002017 putative transposase YP_005711897.1 13575 D 591020 CDS YP_005711898.1 384545986 12284770 complement(13870..15198) 1 NC_017319.1 IS4 ORF 15198 12284770 SFxv_4849 Shigella flexneri 2002017 IS4 ORF YP_005711898.1 13870 R 591020 CDS YP_005711899.1 384545987 12284771 15325..15660 1 NC_017319.1 IS66 family element, orf1 15660 12284771 SFxv_4850 Shigella flexneri 2002017 IS66 family element, orf1 YP_005711899.1 15325 D 591020 CDS YP_005711900.1 384545988 12284772 complement(15741..15920) 1 NC_017319.1 hypothetical protein 15920 12284772 SFxv_4851 Shigella flexneri 2002017 hypothetical protein YP_005711900.1 15741 R 591020 CDS YP_005711901.1 384545989 12284773 16027..17334 1 NC_017319.1 ISSfl4 ORF3 17334 12284773 SFxv_4852 Shigella flexneri 2002017 ISSfl4 ORF3 YP_005711901.1 16027 D 591020 CDS YP_005711902.1 384545990 12284774 17315..17527 1 NC_017319.1 IS3 ORF2 17527 12284774 SFxv_4853 Shigella flexneri 2002017 IS3 ORF2 YP_005711902.1 17315 D 591020 CDS YP_005711903.1 384545991 12284775 18008..18142 1 NC_017319.1 fragment; putative transposase 18142 12284775 SFxv_4854 Shigella flexneri 2002017 putative transposase YP_005711903.1 18008 D 591020 CDS YP_005711904.1 384545992 12284776 18385..18525 1 NC_017319.1 IS630 ORF 18525 12284776 SFxv_4855 Shigella flexneri 2002017 IS630 ORF YP_005711904.1 18385 D 591020 CDS YP_005711905.1 384545993 12284777 18897..19574 1 NC_017319.1 OspD1, probably secreted by the Mxi-Spa machinery 19574 ospD1 12284777 ospD1 Shigella flexneri 2002017 OspD1, probably secreted by the Mxi-Spa machinery YP_005711905.1 18897 D 591020 CDS YP_005711906.1 384545994 12284778 complement(20056..20280) 1 NC_017319.1 hypothetical protein 20280 12284778 SFxv_4857 Shigella flexneri 2002017 hypothetical protein YP_005711906.1 20056 R 591020 CDS YP_005711907.1 384545995 12284779 20682..21248 1 NC_017319.1 IpgB2, probably secreted by the Mxi-Spa machinery 21248 ipgB2 12284779 ipgB2 Shigella flexneri 2002017 IpgB2, probably secreted by the Mxi-Spa machinery YP_005711907.1 20682 D 591020 CDS YP_005711908.1 384545996 12284780 21745..22329 1 NC_017319.1 IS3 ORF2 22329 12284780 SFxv_4859 Shigella flexneri 2002017 IS3 ORF2 YP_005711908.1 21745 D 591020 CDS YP_005711909.1 384545997 12284781 22776..22940 1 NC_017319.1 iso-IS1 ORF1 22940 12284781 SFxv_4860 Shigella flexneri 2002017 iso-IS1 ORF1 YP_005711909.1 22776 D 591020 CDS YP_005711910.1 384545998 12284782 23116..23898 1 NC_017319.1 IS100 ORF1 23898 12284782 SFxv_4861 Shigella flexneri 2002017 IS100 ORF1 YP_005711910.1 23116 D 591020 CDS YP_005711911.1 384545999 12284783 25059..25448 1 NC_017319.1 IS100 ORF1 25448 12284783 SFxv_4862 Shigella flexneri 2002017 IS100 ORF1 YP_005711911.1 25059 D 591020 CDS YP_005711912.1 384546000 12284784 25448..26227 1 NC_017319.1 putative transposase 26227 12284784 SFxv_4863 Shigella flexneri 2002017 putative transposase YP_005711912.1 25448 D 591020 CDS YP_005711913.1 384546001 12284785 26417..26632 1 NC_017319.1 iso-IS1 ORF2 26632 12284785 SFxv_4864 Shigella flexneri 2002017 iso-IS1 ORF2 YP_005711913.1 26417 D 591020 CDS YP_005711914.1 384546002 12284786 26655..26816 1 NC_017319.1 hypothetical protein 26816 12284786 SFxv_4865 Shigella flexneri 2002017 hypothetical protein YP_005711914.1 26655 D 591020 CDS YP_005711915.1 384546003 12284787 26954..28153 1 NC_017319.1 plasmid segregation protein 28153 parA 12284787 parA Shigella flexneri 2002017 plasmid segregation protein YP_005711915.1 26954 D 591020 CDS YP_005711916.1 384546004 12284788 28153..29133 1 NC_017319.1 plasmid segregation protein 29133 parB 12284788 parB Shigella flexneri 2002017 plasmid segregation protein YP_005711916.1 28153 D 591020 CDS YP_005711917.1 384546005 12284789 complement(29338..29460) 1 NC_017319.1 hypothetical protein 29460 12284789 SFxv_4868 Shigella flexneri 2002017 hypothetical protein YP_005711917.1 29338 R 591020 CDS YP_005711918.1 384546006 12284790 29530..29874 1 NC_017319.1 putative transposase 29874 12284790 SFxv_4869 Shigella flexneri 2002017 putative transposase YP_005711918.1 29530 D 591020 CDS YP_005711919.1 384546007 12284791 complement(29901..30047) 1 NC_017319.1 transposase,IS66 family element 30047 12284791 SFxv_4870 Shigella flexneri 2002017 transposase,IS66 family element YP_005711919.1 29901 R 591020 CDS YP_005711920.1 384546008 12284792 complement(30163..31290) 1 NC_017319.1 putative reverse transcriptase 31290 12284792 SFxv_4871 Shigella flexneri 2002017 putative reverse transcriptase YP_005711920.1 30163 R 591020 CDS YP_005711921.1 384546009 12284793 complement(31271..31396) 1 NC_017319.1 putative reverse transcriptase 31396 12284793 SFxv_4872 Shigella flexneri 2002017 putative reverse transcriptase YP_005711921.1 31271 R 591020 CDS YP_005711922.1 384546010 12284794 complement(31857..31988) 1 NC_017319.1 fragment; putative IS orf 31988 12284794 SFxv_4873 Shigella flexneri 2002017 putative IS orf YP_005711922.1 31857 R 591020 CDS YP_005711923.1 384546011 12284795 complement(31988..32116) 1 NC_017319.1 IS629 ORF2 32116 12284795 SFxv_4874 Shigella flexneri 2002017 IS629 ORF2 YP_005711923.1 31988 R 591020 CDS YP_005711924.1 384546012 12284796 complement(32082..32750) 1 NC_017319.1 IS629 ORF2 32750 12284796 SFxv_4875 Shigella flexneri 2002017 IS629 ORF2 YP_005711924.1 32082 R 591020 CDS YP_005711925.1 384546013 12284797 complement(32965..33240) 1 NC_017319.1 IS629 orfA 33240 12284797 SFxv_4876 Shigella flexneri 2002017 IS629 orfA YP_005711925.1 32965 R 591020 CDS YP_005711926.1 384546014 12284798 complement(33297..33704) 1 NC_017319.1 IS150 ORF B 33704 12284798 SFxv_4877 Shigella flexneri 2002017 IS150 ORF B YP_005711926.1 33297 R 591020 CDS YP_005711927.1 384546015 12284799 33760..33948 1 NC_017319.1 IS1294 transposase 33948 12284799 SFxv_4878 Shigella flexneri 2002017 IS1294 transposase YP_005711927.1 33760 D 591020 CDS YP_005711928.1 384546016 12284800 33958..34782 1 NC_017319.1 IS1294 transposase 34782 12284800 SFxv_4879 Shigella flexneri 2002017 IS1294 transposase YP_005711928.1 33958 D 591020 CDS YP_005711929.1 384546017 12284801 34890..35156 1 NC_017319.1 IS1294 transposase 35156 12284801 SFxv_4880 Shigella flexneri 2002017 IS1294 transposase YP_005711929.1 34890 D 591020 CDS YP_005711930.1 384546018 12284802 35226..35345 1 NC_017319.1 IS91 ORF 35345 12284802 SFxv_4881 Shigella flexneri 2002017 IS91 ORF YP_005711930.1 35226 D 591020 CDS YP_005711931.1 384546019 12284803 complement(35562..36083) 1 NC_017319.1 IS150 ORF1 36083 12284803 SFxv_4882 Shigella flexneri 2002017 IS150 ORF1 YP_005711931.1 35562 R 591020 CDS YP_005711932.1 384546020 12284804 complement(36446..37231) 1 NC_017319.1 VirF 37231 virF 12284804 virF Shigella flexneri 2002017 VirF YP_005711932.1 36446 R 591020 CDS YP_005711933.1 384546021 12284805 37909..38064 1 NC_017319.1 IS2 ORF2 38064 12284805 SFxv_4884 Shigella flexneri 2002017 IS2 ORF2 YP_005711933.1 37909 D 591020 CDS YP_005711934.1 384546022 12284806 38246..38512 1 NC_017319.1 OspE1, probably secreted by the Mxi-Spa machinery 38512 ospE1 12284806 ospE1 Shigella flexneri 2002017 OspE1, probably secreted by the Mxi-Spa machinery YP_005711934.1 38246 D 591020 CDS YP_005711935.1 384546023 12284807 complement(38609..38803) 1 NC_017319.1 IS600 ORF2 38803 12284807 SFxv_4886 Shigella flexneri 2002017 IS600 ORF2 YP_005711935.1 38609 R 591020 CDS YP_005711936.1 384546024 12284808 38896..39399 1 NC_017319.1 IS1 ORF2 39399 insB-1 12284808 insB-1 Shigella flexneri 2002017 IS1 ORF2 YP_005711936.1 38896 D 591020 CDS YP_005711937.1 384546025 12284809 complement(39660..40856) 1 NC_017319.1 ISSfl2 ORF 40856 12284809 SFxv_4888 Shigella flexneri 2002017 ISSfl2 ORF YP_005711937.1 39660 R 591020 CDS YP_005711938.1 384546026 12284810 41192..42883 1 NC_017319.1 invasion plasmid antigen, probably secreted by the Mxi-Spa machinery 42883 ipaH2.5 12284810 ipaH2.5 Shigella flexneri 2002017 invasion plasmid antigen, probably secreted by the Mxi-Spa machinery YP_005711938.1 41192 D 591020 CDS YP_005711939.1 384546027 12284509 42986..43261 1 NC_017319.1 IS629 orfA 43261 12284509 SFxv_4890 Shigella flexneri 2002017 IS629 orfA YP_005711939.1 42986 D 591020 CDS YP_005711940.1 384546028 12284510 43476..44336 1 NC_017319.1 IS629 ORF2 44336 12284510 SFxv_4891 Shigella flexneri 2002017 IS629 ORF2 YP_005711940.1 43476 D 591020 CDS YP_005711941.1 384546029 12284511 complement(44407..44709) 1 NC_017319.1 IS600 ORF1 44709 12284511 SFxv_4892 Shigella flexneri 2002017 IS600 ORF1 YP_005711941.1 44407 R 591020 CDS YP_005711942.1 384546030 12284512 complement(44777..45259) 1 NC_017319.1 hypothetical protein 45259 12284512 SFxv_4893 Shigella flexneri 2002017 hypothetical protein YP_005711942.1 44777 R 591020 CDS YP_005711943.1 384546031 12284513 complement(45250..45540) 1 NC_017319.1 hypothetical protein 45540 12284513 SFxv_4894 Shigella flexneri 2002017 hypothetical protein YP_005711943.1 45250 R 591020 CDS YP_005711944.1 384546032 12284514 complement(45696..45830) 1 NC_017319.1 invasion plasmid antigen, probably secreted by the Mxi-Spa machinery 45830 ipaH 12284514 ipaH Shigella flexneri 2002017 invasion plasmid antigen, probably secreted by the Mxi-Spa machinery YP_005711944.1 45696 R 591020 CDS YP_005711945.1 384546033 12284515 45863..46096 1 NC_017319.1 hypothetical protein 46096 12284515 SFxv_4896 Shigella flexneri 2002017 hypothetical protein YP_005711945.1 45863 D 591020 CDS YP_005711946.1 384546034 12284516 46077..47285 1 NC_017319.1 IS1294 transposase 47285 12284516 SFxv_4897 Shigella flexneri 2002017 IS1294 transposase YP_005711946.1 46077 D 591020 CDS YP_005711947.1 384546035 12284517 47355..47585 1 NC_017319.1 ISSfl1 ORF2 47585 12284517 SFxv_4898 Shigella flexneri 2002017 ISSfl1 ORF2 YP_005711947.1 47355 D 591020 CDS YP_005711948.1 384546036 12284518 complement(47734..49188) 1 NC_017319.1 OspC2, probably secreted by the Mxi-Spa machinery 49188 ospC2 12284518 ospC2 Shigella flexneri 2002017 OspC2, probably secreted by the Mxi-Spa machinery YP_005711948.1 47734 R 591020 CDS YP_005711949.1 384546037 12284519 complement(49505..49684) 1 NC_017319.1 IS600 ORF2 49684 12284519 SFxv_4900 Shigella flexneri 2002017 IS600 ORF2 YP_005711949.1 49505 R 591020 CDS YP_005711950.1 384546038 12284520 49777..50235 1 NC_017319.1 IS1 ORF2 50235 insB-2 12284520 insB-2 Shigella flexneri 2002017 IS1 ORF2 YP_005711950.1 49777 D 591020 CDS YP_005711951.1 384546039 12284521 50312..50587 1 NC_017319.1 IS629 orfA 50587 12284521 SFxv_4902 Shigella flexneri 2002017 IS629 orfA YP_005711951.1 50312 D 591020 CDS YP_005711952.1 384546040 12284522 50802..51470 1 NC_017319.1 IS629 ORF2 51470 12284522 SFxv_4903 Shigella flexneri 2002017 IS629 ORF2 YP_005711952.1 50802 D 591020 CDS YP_005711953.1 384546041 12284523 51454..51924 1 NC_017319.1 hypothetical protein 51924 12284523 SFxv_4904 Shigella flexneri 2002017 hypothetical protein YP_005711953.1 51454 D 591020 CDS YP_005711954.1 384546042 12284524 51944..52570 1 NC_017319.1 IS21 ORF2 52570 12284524 SFxv_4905 Shigella flexneri 2002017 IS21 ORF2 YP_005711954.1 51944 D 591020 CDS YP_005711955.1 384546043 12284525 complement(52739..56833) 1 NC_017319.1 SepA, extracellular serine protease of the IgA1 protease family 56833 sepA 12284525 sepA Shigella flexneri 2002017 SepA, extracellular serine protease of the IgA1 protease family YP_005711955.1 52739 R 591020 CDS YP_005711956.1 384546044 12284526 57235..57423 1 NC_017319.1 IS1294 transposase 57423 12284526 SFxv_4907 Shigella flexneri 2002017 IS1294 transposase YP_005711956.1 57235 D 591020 CDS YP_005711957.1 384546045 12284527 57433..58257 1 NC_017319.1 IS1294 transposase 58257 12284527 SFxv_4908 Shigella flexneri 2002017 IS1294 transposase YP_005711957.1 57433 D 591020 CDS YP_005711958.1 384546046 12284528 58365..58631 1 NC_017319.1 IS1294 transposase 58631 12284528 SFxv_4909 Shigella flexneri 2002017 IS1294 transposase YP_005711958.1 58365 D 591020 CDS YP_005711959.1 384546047 12284529 59033..59257 1 NC_017319.1 ISSfl1 ORF1 59257 12284529 SFxv_4910 Shigella flexneri 2002017 ISSfl1 ORF1 YP_005711959.1 59033 D 591020 CDS YP_005711960.1 384546048 12284530 59263..59652 1 NC_017319.1 ISSfl1 ORF2 59652 12284530 SFxv_4911 Shigella flexneri 2002017 ISSfl1 ORF2 YP_005711960.1 59263 D 591020 CDS YP_005711961.1 384546049 12284531 59767..60798 1 NC_017319.1 IS630 ORF 60798 12284531 SFxv_4912 Shigella flexneri 2002017 IS630 ORF YP_005711961.1 59767 D 591020 CDS YP_005711962.1 384546050 12284532 complement(60818..61012) 1 NC_017319.1 hypothetical protein 61012 12284532 SFxv_4913 Shigella flexneri 2002017 hypothetical protein YP_005711962.1 60818 R 591020 CDS YP_005711963.1 384546051 12284533 61450..61572 1 NC_017319.1 iso-IS1 ORF2 61572 12284533 SFxv_4914 Shigella flexneri 2002017 iso-IS1 ORF2 YP_005711963.1 61450 D 591020 CDS YP_005711964.1 384546052 12284534 complement(61660..61827) 1 NC_017319.1 ISSfl4 ORF3 61827 12284534 SFxv_4915 Shigella flexneri 2002017 ISSfl4 ORF3 YP_005711964.1 61660 R 591020 CDS YP_005711965.1 384546053 12284535 62207..63904 1 NC_017319.1 invasion plasmid antigen, probably secreted by the Mxi-Spa machinery 63904 ipaH7.8 12284535 ipaH7.8 Shigella flexneri 2002017 invasion plasmid antigen, probably secreted by the Mxi-Spa machinery YP_005711965.1 62207 D 591020 CDS YP_005711966.1 384546054 12284536 64332..66056 1 NC_017319.1 invasion plasmid antigen, probably secreted by the Mxi-Spa machinery 66056 ipaH4.5 12284536 ipaH4.5 Shigella flexneri 2002017 invasion plasmid antigen, probably secreted by the Mxi-Spa machinery YP_005711966.1 64332 D 591020 CDS YP_005711967.1 384546055 12284537 66159..66434 1 NC_017319.1 IS629 orfA 66434 12284537 SFxv_4918 Shigella flexneri 2002017 IS629 orfA YP_005711967.1 66159 D 591020 CDS YP_005711968.1 384546056 12284538 66649..67362 1 NC_017319.1 IS629 ORF2 67362 12284538 SFxv_4919 Shigella flexneri 2002017 IS629 ORF2 YP_005711968.1 66649 D 591020 CDS YP_005711969.1 384546057 12284539 67916..68122 1 NC_017319.1 S-type pyocin domain protein 68122 12284539 SFxv_4920 Shigella flexneri 2002017 S-type pyocin domain protein YP_005711969.1 67916 D 591020 CDS YP_005711970.1 384546058 12284540 68290..69684 1 NC_017319.1 invasion plasmid product 69684 ipgH 12284540 ipgH Shigella flexneri 2002017 invasion plasmid product YP_005711970.1 68290 D 591020 CDS YP_005711971.1 384546059 12284541 69764..69943 1 NC_017319.1 hypothetical protein 69943 12284541 SFxv_4922 Shigella flexneri 2002017 hypothetical protein YP_005711971.1 69764 D 591020 CDS YP_005711972.1 384546060 12284542 complement(69995..70228) 1 NC_017319.1 IS100 ORF2 70228 12284542 SFxv_4923 Shigella flexneri 2002017 IS100 ORF2 YP_005711972.1 69995 R 591020 CDS YP_005711973.1 384546061 12284543 complement(70269..70772) 1 NC_017319.1 hypothetical protein 70772 12284543 SFxv_4924 Shigella flexneri 2002017 hypothetical protein YP_005711973.1 70269 R 591020 CDS YP_005711974.1 384546062 12284544 complement(70745..71536) 1 NC_017319.1 IS629 ORF2 71536 12284544 SFxv_4925 Shigella flexneri 2002017 IS629 ORF2 YP_005711974.1 70745 R 591020 CDS YP_005711975.1 384546063 12284545 complement(71751..72026) 1 NC_017319.1 IS629 orfA 72026 12284545 SFxv_4926 Shigella flexneri 2002017 IS629 orfA YP_005711975.1 71751 R 591020 CDS YP_005711976.1 384546064 12284546 72039..72161 1 NC_017319.1 IS150 ORF B 72161 12284546 SFxv_4927 Shigella flexneri 2002017 IS150 ORF B YP_005711976.1 72039 D 591020 CDS YP_005711977.1 384546065 12284547 72329..72991 1 NC_017319.1 transposase/IS protein 72991 12284547 SFxv_4928 Shigella flexneri 2002017 transposase/IS protein YP_005711977.1 72329 D 591020 CDS YP_005711978.1 384546066 12284548 complement(73367..73633) 1 NC_017319.1 IS1294 transposase 73633 12284548 SFxv_4929 Shigella flexneri 2002017 IS1294 transposase YP_005711978.1 73367 R 591020 CDS YP_005711979.1 384546067 12284549 complement(73741..74574) 1 NC_017319.1 IS1294 transposase 74574 12284549 SFxv_4930 Shigella flexneri 2002017 IS1294 transposase YP_005711979.1 73741 R 591020 CDS YP_005711980.1 384546068 12284550 complement(74555..74788) 1 NC_017319.1 hypothetical protein 74788 12284550 SFxv_4931 Shigella flexneri 2002017 hypothetical protein YP_005711980.1 74555 R 591020 CDS YP_005711981.1 384546069 12284551 74821..75075 1 NC_017319.1 fragment; invasion plasmid antigen 75075 ipaH 12284551 ipaH Shigella flexneri 2002017 invasion plasmid antigen YP_005711981.1 74821 D 591020 CDS YP_005711982.1 384546070 12284552 complement(75230..76684) 1 NC_017319.1 OspD3, probably secreted by the Mxi-Spa machinery 76684 ospD3 12284552 ospD3 Shigella flexneri 2002017 OspD3, probably secreted by the Mxi-Spa machinery YP_005711982.1 75230 R 591020 CDS YP_005711983.1 384546071 12284553 77003..77191 1 NC_017319.1 IS1 orfA 77191 12284553 SFxv_4934 Shigella flexneri 2002017 IS1 orfA YP_005711983.1 77003 D 591020 CDS YP_005711984.1 384546072 12284554 complement(77256..78668) 1 NC_017319.1 protein OspC1 78668 ospC1 12284554 ospC1 Shigella flexneri 2002017 protein OspC1 YP_005711984.1 77256 R 591020 CDS YP_005711985.1 384546073 12284555 complement(79123..79422) 1 NC_017319.1 hypothetical protein 79422 12284555 SFxv_4936 Shigella flexneri 2002017 hypothetical protein YP_005711985.1 79123 R 591020 CDS YP_005711986.1 384546074 12284556 79783..79971 1 NC_017319.1 hypothetical protein 79971 12284556 SFxv_4937 Shigella flexneri 2002017 hypothetical protein YP_005711986.1 79783 D 591020 CDS YP_005711987.1 384546075 12284557 complement(80008..80397) 1 NC_017319.1 ISSfl1 ORF2 80397 12284557 SFxv_4938 Shigella flexneri 2002017 ISSfl1 ORF2 YP_005711987.1 80008 R 591020 CDS YP_005711988.1 384546076 12284558 complement(80403..80627) 1 NC_017319.1 ISSfl1 ORF1 80627 12284558 SFxv_4939 Shigella flexneri 2002017 ISSfl1 ORF1 YP_005711988.1 80403 R 591020 CDS YP_005711989.1 384546077 12284559 complement(80962..81435) 1 NC_017319.1 hypothetical protein 81435 12284559 SFxv_4940 Shigella flexneri 2002017 hypothetical protein YP_005711989.1 80962 R 591020 CDS YP_005711990.1 384546078 12284560 81540..81905 1 NC_017319.1 insertion element IS2 repressor InsA 81905 12284560 SFxv_4941 Shigella flexneri 2002017 insertion element IS2 repressor InsA YP_005711990.1 81540 D 591020 CDS YP_005711991.1 384546079 12284561 81863..82768 1 NC_017319.1 insertion element IS2 transposase InsD 82768 12284561 SFxv_4942 Shigella flexneri 2002017 insertion element IS2 transposase InsD YP_005711991.1 81863 D 591020 CDS YP_005711992.1 384546080 12284562 83022..84218 1 NC_017319.1 ISSfl2 ORF 84218 12284562 SFxv_4943 Shigella flexneri 2002017 ISSfl2 ORF YP_005711992.1 83022 D 591020 CDS YP_005711993.1 384546081 12284563 complement(84197..84637) 1 NC_017319.1 hypothetical protein 84637 12284563 SFxv_4944 Shigella flexneri 2002017 hypothetical protein YP_005711993.1 84197 R 591020 CDS YP_005711994.1 384546082 12284564 complement(84865..85491) 1 NC_017319.1 hypothetical protein 85491 12284564 SFxv_4945 Shigella flexneri 2002017 hypothetical protein YP_005711994.1 84865 R 591020 CDS YP_005711995.1 384546083 12284565 complement(85488..85658) 1 NC_017319.1 hypothetical protein 85658 12284565 SFxv_4946 Shigella flexneri 2002017 hypothetical protein YP_005711995.1 85488 R 591020 CDS YP_005711996.1 384546084 12284566 complement(85669..86574) 1 NC_017319.1 insertion element IS2 transposase InsD 86574 12284566 SFxv_4947 Shigella flexneri 2002017 insertion element IS2 transposase InsD YP_005711996.1 85669 R 591020 CDS YP_005711997.1 384546085 12284567 complement(86532..86717) 1 NC_017319.1 IS2 ORF1 86717 12284567 SFxv_4948 Shigella flexneri 2002017 IS2 ORF1 YP_005711997.1 86532 R 591020 CDS YP_005711998.1 384546086 12284568 complement(87012..87830) 1 NC_017319.1 IS600 ORF2 87830 12284568 SFxv_4949 Shigella flexneri 2002017 IS600 ORF2 YP_005711998.1 87012 R 591020 CDS YP_005711999.1 384546087 12284569 complement(87866..88168) 1 NC_017319.1 ISSd1, transposase orfA/B, fusion 88168 12284569 SFxv_4950 Shigella flexneri 2002017 ISSd1, transposase orfA/B, fusion YP_005711999.1 87866 R 591020 CDS YP_005712000.1 384546088 12284570 complement(88689..89174) 1 NC_017319.1 hypothetical protein 89174 12284570 SFxv_4951 Shigella flexneri 2002017 hypothetical protein YP_005712000.1 88689 R 591020 CDS YP_005712001.1 384546089 12284571 complement(89162..89428) 1 NC_017319.1 hypothetical protein 89428 12284571 SFxv_4952 Shigella flexneri 2002017 hypothetical protein YP_005712001.1 89162 R 591020 CDS YP_005712002.1 384546090 12284572 complement(90516..90650) 1 NC_017319.1 hypothetical protein 90650 12284572 SFxv_4953 Shigella flexneri 2002017 hypothetical protein YP_005712002.1 90516 R 591020 CDS YP_005712003.1 384546091 12284573 complement(90766..92367) 1 NC_017319.1 ISSfl3 orfC,D 92367 12284573 SFxv_4954 Shigella flexneri 2002017 ISSfl3 orfC,D YP_005712003.1 90766 R 591020 CDS YP_005712004.1 384546092 12284574 complement(92364..92714) 1 NC_017319.1 ISSfl4 ORF2 92714 12284574 SFxv_4955 Shigella flexneri 2002017 ISSfl4 ORF2 YP_005712004.1 92364 R 591020 CDS YP_005712005.1 384546093 12284575 complement(92711..93385) 1 NC_017319.1 ISSfl4 ORF1; K07483 transposase 93385 12284575 SFxv_4956 Shigella flexneri 2002017 ISSfl4 ORF1; K07483 transposase YP_005712005.1 92711 R 591020 CDS YP_005712006.1 384546094 12284576 93958..95412 1 NC_017319.1 OspC3 95412 ospC3 12284576 ospC3 Shigella flexneri 2002017 OspC3 YP_005712006.1 93958 D 591020 CDS YP_005712007.1 384546095 12284577 95750..96052 1 NC_017319.1 IS600 ORF1 96052 12284577 SFxv_4958 Shigella flexneri 2002017 IS600 ORF1 YP_005712007.1 95750 D 591020 CDS YP_005712008.1 384546096 12284578 96104..96814 1 NC_017319.1 IS600 ORF2 96814 12284578 SFxv_4959 Shigella flexneri 2002017 IS600 ORF2 YP_005712008.1 96104 D 591020 CDS YP_005712009.1 384546097 12284579 96939..97181 1 NC_017319.1 hypothetical protein 97181 12284579 SFxv_4960 Shigella flexneri 2002017 hypothetical protein YP_005712009.1 96939 D 591020 CDS YP_005712010.1 384546098 12284580 97263..97658 1 NC_017319.1 IS1353 putative transposase-like protein 97658 12284580 SFxv_4961 Shigella flexneri 2002017 IS1353 putative transposase-like protein YP_005712010.1 97263 D 591020 CDS YP_005712011.1 384546099 12284581 97779..98894 1 NC_017319.1 putative transposase 98894 12284581 SFxv_4962 Shigella flexneri 2002017 putative transposase YP_005712011.1 97779 D 591020 CDS YP_005712012.1 384546100 12284582 complement(98984..100180) 1 NC_017319.1 ISSfl2 ORF 100180 12284582 SFxv_4963 Shigella flexneri 2002017 ISSfl2 ORF YP_005712012.1 98984 R 591020 CDS YP_005712013.1 384546101 12284583 complement(100372..101376) 1 NC_017319.1 IS100 ORF1 101376 12284583 SFxv_4964 Shigella flexneri 2002017 IS100 ORF1 YP_005712013.1 100372 R 591020 CDS YP_005712014.1 384546102 12284584 102780..103508 1 NC_017319.1 IpaJ, invasion plasmid antigen 103508 ipaJ 12284584 ipaJ Shigella flexneri 2002017 IpaJ, invasion plasmid antigen YP_005712014.1 102780 D 591020 CDS YP_005712015.1 384546103 12284585 complement(104455..105384) 1 NC_017319.1 VirB 105384 virB 12284585 virB Shigella flexneri 2002017 VirB YP_005712015.1 104455 R 591020 CDS YP_005712016.1 384546104 12284586 complement(105601..105837) 1 NC_017319.1 Acp, putative acyl carrier protein 105837 acp 12284586 acp Shigella flexneri 2002017 Acp, putative acyl carrier protein YP_005712016.1 105601 R 591020 CDS YP_005712017.1 384546105 12284587 complement(105841..107742) 1 NC_017319.1 IpaA, secreted by the Mxi-Spa machinery, modulates entry of bacteria into epithelial cells 107742 ipaA 12284587 ipaA Shigella flexneri 2002017 IpaA, secreted by the Mxi-Spa machinery, modulates entry of bacteria into epithelial cells YP_005712017.1 105841 R 591020 CDS YP_005712018.1 384546106 12284588 complement(107751..108749) 1 NC_017319.1 secreted by the Mxi-Spa machinery, required for entry of bacteria into epithelial cells; IpaD 108749 ipaD 12284588 ipaD Shigella flexneri 2002017 IpaD YP_005712018.1 107751 R 591020 CDS YP_005712019.1 384546107 12284589 complement(108800..109891) 1 NC_017319.1 secreted by the Mxi-Spa secretion machinery, required for entry into epithelial cells; IpaC 109891 ipaC 12284589 ipaC Shigella flexneri 2002017 IpaC YP_005712019.1 108800 R 591020 CDS YP_005712020.1 384546108 12284590 complement(109911..111653) 1 NC_017319.1 secreted by the Mxi-Spa secretion machinery, required for entry into epithelial cells; IpaB 111653 ipaB 12284590 ipaB Shigella flexneri 2002017 IpaB YP_005712020.1 109911 R 591020 CDS YP_005712021.1 384546109 12284591 complement(111659..112126) 1 NC_017319.1 IpgC 112126 ipgC 12284591 ipgC Shigella flexneri 2002017 IpgC YP_005712021.1 111659 R 591020 CDS YP_005712022.1 384546110 12284592 complement(112183..112809) 1 NC_017319.1 IpgB1 protein 112809 ipgB1 12284592 ipgB1 Shigella flexneri 2002017 IpgB1 protein YP_005712022.1 112183 R 591020 CDS YP_005712023.1 384546111 12284593 complement(112825..113214) 1 NC_017319.1 IpgA 113214 ipgA 12284593 ipgA Shigella flexneri 2002017 IpgA YP_005712023.1 112825 R 591020 CDS YP_005712024.1 384546112 12284594 complement(113227..114711) 1 NC_017319.1 IcsB, invasion protein 114711 icsB 12284594 icsB Shigella flexneri 2002017 IcsB, invasion protein YP_005712024.1 113227 R 591020 CDS YP_005712025.1 384546113 12284595 115025..116641 1 NC_017319.1 secreted by the Mxi-Spa machinery, modulates entry of bacteria into epithelial cells; IpgD 116641 ipgD 12284595 ipgD Shigella flexneri 2002017 IpgD YP_005712025.1 115025 D 591020 CDS YP_005712026.1 384546114 12284596 116651..117013 1 NC_017319.1 IpgE 117013 ipgE 12284596 ipgE Shigella flexneri 2002017 IpgE YP_005712026.1 116651 D 591020 CDS YP_005712027.1 384546115 12284597 117013..117471 1 NC_017319.1 similar to the catalytic site of lyzozymes; IpgF, periplasmic protein 117471 ipgF 12284597 ipgF Shigella flexneri 2002017 IpgF, periplasmic protein YP_005712027.1 117013 D 591020 CDS YP_005712028.1 384546116 12284598 117480..118595 1 NC_017319.1 MxiG protein 118595 mxiG 12284598 mxiG Shigella flexneri 2002017 MxiG protein YP_005712028.1 117480 D 591020 CDS YP_005712029.1 384546117 12284599 118603..118854 1 NC_017319.1 MxiH, component of the Mxi-Spa secretion machinery 118854 mxiH 12284599 mxiH Shigella flexneri 2002017 MxiH, component of the Mxi-Spa secretion machinery YP_005712029.1 118603 D 591020 CDS YP_005712030.1 384546118 12284600 118867..119160 1 NC_017319.1 MxiI, component of the Mxi-Spa secretion machinery 119160 mxiI 12284600 mxiI Shigella flexneri 2002017 MxiI, component of the Mxi-Spa secretion machinery YP_005712030.1 118867 D 591020 CDS YP_005712031.1 384546119 12284601 119166..119891 1 NC_017319.1 MxiJ, lipoprotein, component of the Mxi-Spa secretion machinery 119891 mxiJ 12284601 mxiJ Shigella flexneri 2002017 MxiJ, lipoprotein, component of the Mxi-Spa secretion machinery YP_005712031.1 119166 D 591020 CDS YP_005712032.1 384546120 12284602 119897..120415 1 NC_017319.1 MxiK, putative component of the Mxi-Spa secretion machinery 120415 mxiK 12284602 mxiK Shigella flexneri 2002017 MxiK, putative component of the Mxi-Spa secretion machinery YP_005712032.1 119897 D 591020 CDS YP_005712033.1 384546121 12284603 120372..121052 1 NC_017319.1 MxiN, putative component of the Mxi-Spa secretion machinery 121052 mxiN 12284603 mxiN Shigella flexneri 2002017 MxiN, putative component of the Mxi-Spa secretion machinery YP_005712033.1 120372 D 591020 CDS YP_005712034.1 384546122 12284604 121045..121452 1 NC_017319.1 MxiL, secreted by and putative component of the Mxi-Spa secretion machinery 121452 mxiL 12284604 mxiL Shigella flexneri 2002017 MxiL, secreted by and putative component of the Mxi-Spa secretion machinery YP_005712034.1 121045 D 591020 CDS YP_005712035.1 384546123 12284605 121436..121864 1 NC_017319.1 MxiM, lipoprotein, component of the Mxi-Spa secretion machinery 121864 mxiM 12284605 mxiM Shigella flexneri 2002017 MxiM, lipoprotein, component of the Mxi-Spa secretion machinery YP_005712035.1 121436 D 591020 CDS YP_005712036.1 384546124 12284606 121994..122626 1 NC_017319.1 similarities to transcriptional activators of the AraC family, function unknown; MxiE 122626 mxiE 12284606 mxiE Shigella flexneri 2002017 MxiE YP_005712036.1 121994 D 591020 CDS YP_005712037.1 384546125 12284607 122613..124313 1 NC_017319.1 MxiD, outermembrane protein of the secretin family, component of the Mxi-Spa secretion machinery 124313 mxiD 12284607 mxiD Shigella flexneri 2002017 MxiD, outermembrane protein of the secretin family, component of the Mxi-Spa secretion machinery YP_005712037.1 122613 D 591020 CDS YP_005712038.1 384546126 12284608 124332..125399 1 NC_017319.1 MxiC, secreted by and putative component of the Mxi-Spa secretion machinery 125399 mxiC 12284608 mxiC Shigella flexneri 2002017 MxiC, secreted by and putative component of the Mxi-Spa secretion machinery YP_005712038.1 124332 D 591020 CDS YP_005712039.1 384546127 12284609 125490..127472 1 NC_017319.1 MxiA, innermembrane protein, component of the Mxi-Spa secretion machinery 127472 mxiA 12284609 mxiA Shigella flexneri 2002017 MxiA, innermembrane protein, component of the Mxi-Spa secretion machinery YP_005712039.1 125490 D 591020 CDS YP_005712040.1 384546128 12284610 127485..127886 1 NC_017319.1 Spa15, putative component of the Mxi-Spa secretion machinery 127886 spa15 12284610 spa15 Shigella flexneri 2002017 Spa15, putative component of the Mxi-Spa secretion machinery YP_005712040.1 127485 D 591020 CDS YP_005712041.1 384546129 12284611 127890..129182 1 NC_017319.1 ATP synthase 129182 spa47 12284611 spa47 Shigella flexneri 2002017 ATP synthase YP_005712041.1 127890 D 591020 CDS YP_005712042.1 384546130 12284612 129275..129613 1 NC_017319.1 Spa13, component of the Mxi-Spa secretion machinery 129613 spa13 12284612 spa13 Shigella flexneri 2002017 Spa13, component of the Mxi-Spa secretion machinery YP_005712042.1 129275 D 591020 CDS YP_005712043.1 384546131 12284613 129600..130478 1 NC_017319.1 Spa32, secreted by and component of the Mxi-Spa machinery 130478 spa32 12284613 spa32 Shigella flexneri 2002017 Spa32, secreted by and component of the Mxi-Spa machinery YP_005712043.1 129600 D 591020 CDS YP_005712044.1 384546132 12284614 130472..131353 1 NC_017319.1 Spa33, component of the Mxi-Spa secretion machinery 131353 spa33 12284614 spa33 Shigella flexneri 2002017 Spa33, component of the Mxi-Spa secretion machinery YP_005712044.1 130472 D 591020 CDS YP_005712045.1 384546133 12284615 131358..132008 1 NC_017319.1 surface presentation of antigens protein SpaP 132008 spaP 12284615 spaP Shigella flexneri 2002017 surface presentation of antigens protein SpaP YP_005712045.1 131358 D 591020 CDS YP_005712046.1 384546134 12284616 132023..132283 1 NC_017319.1 Spa9, component of the Mxi-Spa secretion machinery 132283 spa9 12284616 spa9 Shigella flexneri 2002017 Spa9, component of the Mxi-Spa secretion machinery YP_005712046.1 132023 D 591020 CDS YP_005712047.1 384546135 12284617 132283..133053 1 NC_017319.1 Spa29, component of the Mxi-Spa secretion machinery 133053 spa29 12284617 spa29 Shigella flexneri 2002017 Spa29, component of the Mxi-Spa secretion machinery YP_005712047.1 132283 D 591020 CDS YP_005712048.1 384546136 12284618 133060..134088 1 NC_017319.1 surface presentation of antigens protein SpaS 134088 spa40 12284618 spa40 Shigella flexneri 2002017 surface presentation of antigens protein SpaS YP_005712048.1 133060 D 591020 CDS YP_005712049.1 384546137 12284619 134110..134343 1 NC_017319.1 spa-orf10; hypothetical protein 134343 12284619 SFxv_5000 Shigella flexneri 2002017 spa-orf10; hypothetical protein YP_005712049.1 134110 D 591020 CDS YP_005712050.1 384546138 12284620 complement(134920..135645) 1 NC_017319.1 IS600 ORF2 135645 12284620 SFxv_5001 Shigella flexneri 2002017 IS600 ORF2 YP_005712050.1 134920 R 591020 CDS YP_005712051.1 384546139 12284621 complement(135681..135983) 1 NC_017319.1 IS600 ORF1 135983 12284621 SFxv_5002 Shigella flexneri 2002017 IS600 ORF1 YP_005712051.1 135681 R 591020 CDS YP_005712052.1 384546140 12284622 136069..136257 1 NC_017319.1 hypothetical protein 136257 12284622 SFxv_5003 Shigella flexneri 2002017 hypothetical protein YP_005712052.1 136069 D 591020 CDS YP_005712053.1 384546141 12284623 136269..136433 1 NC_017319.1 IS1294 transposase 136433 12284623 SFxv_5004 Shigella flexneri 2002017 IS1294 transposase YP_005712053.1 136269 D 591020 CDS YP_005712054.1 384546142 12284624 136448..136636 1 NC_017319.1 IS1294 transposase 136636 12284624 SFxv_5005 Shigella flexneri 2002017 IS1294 transposase YP_005712054.1 136448 D 591020 CDS YP_005712055.1 384546143 12284625 136646..137470 1 NC_017319.1 IS1294 transposase 137470 12284625 SFxv_5006 Shigella flexneri 2002017 IS1294 transposase YP_005712055.1 136646 D 591020 CDS YP_005712056.1 384546144 12284626 137578..137844 1 NC_017319.1 IS1294 transposase 137844 12284626 SFxv_5007 Shigella flexneri 2002017 IS1294 transposase YP_005712056.1 137578 D 591020 CDS YP_005712057.1 384546145 12284627 complement(137959..138252) 1 NC_017319.1 IS3 ORF2 138252 12284627 SFxv_5008 Shigella flexneri 2002017 IS3 ORF2 YP_005712057.1 137959 R 591020 CDS YP_005712058.1 384546146 12284628 complement(138313..138519) 1 NC_017319.1 IS3 ORF1 138519 12284628 SFxv_5009 Shigella flexneri 2002017 IS3 ORF1 YP_005712058.1 138313 R 591020 CDS YP_005712059.1 384546147 12284629 complement(138582..138992) 1 NC_017319.1 hypothetical protein 138992 12284629 SFxv_5010 Shigella flexneri 2002017 hypothetical protein YP_005712059.1 138582 R 591020 CDS YP_005712060.1 384546148 12284630 complement(139155..139304) 1 NC_017319.1 IS630 ORF 139304 12284630 SFxv_5011 Shigella flexneri 2002017 IS630 ORF YP_005712060.1 139155 R 591020 CDS YP_005712061.1 384546149 12284631 complement(139538..140254) 1 NC_017319.1 hypothetical protein 140254 12284631 SFxv_5012 Shigella flexneri 2002017 hypothetical protein YP_005712061.1 139538 R 591020 CDS YP_005712062.1 384546150 12284632 complement(140838..140960) 1 NC_017319.1 putative transposase 140960 12284632 SFxv_5013 Shigella flexneri 2002017 putative transposase YP_005712062.1 140838 R 591020 CDS YP_005712063.1 384546151 12284633 complement(140983..141177) 1 NC_017319.1 putative transposase 141177 12284633 SFxv_5014 Shigella flexneri 2002017 putative transposase YP_005712063.1 140983 R 591020 CDS YP_005712064.1 384546152 12284634 complement(141271..141417) 1 NC_017319.1 transposase 141417 12284634 SFxv_5015 Shigella flexneri 2002017 transposase YP_005712064.1 141271 R 591020 CDS YP_005712065.1 384546153 12284635 141371..141772 1 NC_017319.1 hypothetical protein 141772 12284635 SFxv_5016 Shigella flexneri 2002017 hypothetical protein YP_005712065.1 141371 D 591020 CDS YP_005712066.1 384546154 12284636 141829..142104 1 NC_017319.1 IS629 orfA 142104 12284636 SFxv_5017 Shigella flexneri 2002017 IS629 orfA YP_005712066.1 141829 D 591020 CDS YP_005712067.1 384546155 12284637 142319..142726 1 NC_017319.1 IS629 ORF2 142726 12284637 SFxv_5018 Shigella flexneri 2002017 IS629 ORF2 YP_005712067.1 142319 D 591020 CDS YP_005712068.1 384546156 12284638 142695..142988 1 NC_017319.1 IS629 ORF2 142988 12284638 SFxv_5019 Shigella flexneri 2002017 IS629 ORF2 YP_005712068.1 142695 D 591020 CDS YP_005712069.1 384546157 12284639 complement(142991..143152) 1 NC_017319.1 putative transposase 143152 12284639 SFxv_5020 Shigella flexneri 2002017 putative transposase YP_005712069.1 142991 R 591020 CDS YP_005712070.1 384546158 12284640 complement(143466..143867) 1 NC_017319.1 IS91 ORF 143867 12284640 SFxv_5021 Shigella flexneri 2002017 IS91 ORF YP_005712070.1 143466 R 591020 CDS YP_005712071.1 384546159 12284641 complement(143822..144244) 1 NC_017319.1 putative IS91 ORF2 144244 12284641 SFxv_5022 Shigella flexneri 2002017 putative IS91 ORF2 YP_005712071.1 143822 R 591020 CDS YP_005712072.1 384546160 12284642 complement(145293..145535) 1 NC_017319.1 IS3 ORF2 145535 12284642 SFxv_5023 Shigella flexneri 2002017 IS3 ORF2 YP_005712072.1 145293 R 591020 CDS YP_005712073.1 384546161 12284643 complement(145508..146071) 1 NC_017319.1 IS629 ORF2 146071 12284643 SFxv_5024 Shigella flexneri 2002017 IS629 ORF2 YP_005712073.1 145508 R 591020 CDS YP_005712074.1 384546162 12284644 complement(146178..146345) 1 NC_017319.1 IS629 ORF1 146345 12284644 SFxv_5025 Shigella flexneri 2002017 IS629 ORF1 YP_005712074.1 146178 R 591020 CDS YP_005712075.1 384546163 12284645 complement(146575..147777) 1 NC_017319.1 VirA protein 147777 virA 12284645 virA Shigella flexneri 2002017 VirA protein YP_005712075.1 146575 R 591020 CDS YP_005712076.1 384546164 12284646 148306..151614 1 NC_017319.1 IcsA (VirG), outermembrane protein exposed to the bacterial surface by a C-terminal autotransporter domain and involved in the movement of intracellular bacteria by binding to N-WASP 151614 virG 12284646 virG Shigella flexneri 2002017 IcsA (VirG), outermembrane protein exposed to the bacterial surface by a C-terminal autotransporter domain and involved in the movement of intracellular bacteria by binding to N-WASP YP_005712076.1 148306 D 591020 CDS YP_005712077.1 384546165 12284647 151800..152057 1 NC_017319.1 adhesion protein 152057 12284647 SFxv_5028 Shigella flexneri 2002017 adhesion protein YP_005712077.1 151800 D 591020 CDS YP_005712078.1 384546166 12284648 complement(152168..152287) 1 NC_017319.1 IS150 ORF B 152287 12284648 SFxv_5029 Shigella flexneri 2002017 IS150 ORF B YP_005712078.1 152168 R 591020 CDS YP_005712079.1 384546167 12284649 152300..152575 1 NC_017319.1 IS629 orfA 152575 12284649 SFxv_5030 Shigella flexneri 2002017 IS629 orfA YP_005712079.1 152300 D 591020 CDS YP_005712080.1 384546168 12284650 152790..153458 1 NC_017319.1 IS629 ORF2 153458 12284650 SFxv_5031 Shigella flexneri 2002017 IS629 ORF2 YP_005712080.1 152790 D 591020 CDS YP_005712081.1 384546169 12284651 153799..155451 1 NC_017319.1 bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic 155451 ushA 12284651 ushA Shigella flexneri 2002017 bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic YP_005712081.1 153799 D 591020 CDS YP_005712082.1 384546170 12284652 155474..155605 1 NC_017319.1 hypothetical protein 155605 12284652 SFxv_5033 Shigella flexneri 2002017 hypothetical protein YP_005712082.1 155474 D 591020 CDS YP_005712083.1 384546171 12284653 complement(155958..156362) 1 NC_017319.1 putative reverse transcriptase 156362 12284653 SFxv_5034 Shigella flexneri 2002017 putative reverse transcriptase YP_005712083.1 155958 R 591020 CDS YP_005712084.1 384546172 12284654 complement(156337..157140) 1 NC_017319.1 putative reverse transcriptase 157140 12284654 SFxv_5035 Shigella flexneri 2002017 putative reverse transcriptase YP_005712084.1 156337 R 591020 CDS YP_005712085.1 384546173 12284655 complement(157153..157353) 1 NC_017319.1 IS600 ORF2 157353 12284655 SFxv_5036 Shigella flexneri 2002017 IS600 ORF2 YP_005712085.1 157153 R 591020 CDS YP_005712086.1 384546174 12284656 157749..158498 1 NC_017319.1 PhoN1, periplasmic non specific acid ohosphatase 158498 phoN1 12284656 phoN1 Shigella flexneri 2002017 PhoN1, periplasmic non specific acid ohosphatase YP_005712086.1 157749 D 591020 CDS YP_005712087.1 384546175 12284657 complement(158668..159057) 1 NC_017319.1 ISSfl1 ORF2 159057 12284657 SFxv_5038 Shigella flexneri 2002017 ISSfl1 ORF2 YP_005712087.1 158668 R 591020 CDS YP_005712088.1 384546176 12284658 complement(159063..159287) 1 NC_017319.1 ISSfl1 ORF1 159287 12284658 SFxv_5039 Shigella flexneri 2002017 ISSfl1 ORF1 YP_005712088.1 159063 R 591020 CDS YP_005712089.1 384546177 12284659 complement(159558..159932) 1 NC_017319.1 hypothetical protein 159932 12284659 SFxv_5040 Shigella flexneri 2002017 hypothetical protein YP_005712089.1 159558 R 591020 CDS YP_005712090.1 384546178 12284660 complement(160121..160516) 1 NC_017319.1 plasmid stable inheritance protein 160516 stbB 12284660 stbB Shigella flexneri 2002017 plasmid stable inheritance protein YP_005712090.1 160121 R 591020 CDS YP_005712091.1 384546179 12284661 complement(160516..161475) 1 NC_017319.1 plasmid stable inheritance protein 161475 stbA 12284661 stbA Shigella flexneri 2002017 plasmid stable inheritance protein YP_005712091.1 160516 R 591020 CDS YP_005712092.1 384546180 12284662 161915..162817 1 NC_017319.1 hypothetical protein 162817 12284662 SFxv_5043 Shigella flexneri 2002017 hypothetical protein YP_005712092.1 161915 D 591020 CDS YP_005712093.1 384546181 12284663 complement(162969..163094) 1 NC_017319.1 hypothetical protein 163094 12284663 SFxv_5044 Shigella flexneri 2002017 hypothetical protein YP_005712093.1 162969 R 591020 CDS YP_005712094.1 384546182 12284664 163189..163872 1 NC_017319.1 hypothetical protein 163872 12284664 SFxv_5045 Shigella flexneri 2002017 hypothetical protein YP_005712094.1 163189 D 591020 CDS YP_005712095.1 384546183 12284665 163873..164094 1 NC_017319.1 hypothetical protein 164094 12284665 SFxv_5046 Shigella flexneri 2002017 hypothetical protein YP_005712095.1 163873 D 591020 CDS YP_005712096.1 384546184 12284666 164106..164291 1 NC_017319.1 hypothetical protein 164291 12284666 SFxv_5047 Shigella flexneri 2002017 hypothetical protein YP_005712096.1 164106 D 591020 CDS YP_005712097.1 384546185 12284667 164325..164540 1 NC_017319.1 hypothetical protein 164540 12284667 SFxv_5048 Shigella flexneri 2002017 hypothetical protein YP_005712097.1 164325 D 591020 CDS YP_005712098.1 384546186 12284668 164585..165355 1 NC_017319.1 hypothetical protein 165355 12284668 SFxv_5049 Shigella flexneri 2002017 hypothetical protein YP_005712098.1 164585 D 591020 CDS YP_005712099.1 384546187 12284669 complement(165694..166347) 1 NC_017319.1 putative transposase 166347 12284669 SFxv_5050 Shigella flexneri 2002017 putative transposase YP_005712099.1 165694 R 591020 CDS YP_005712100.1 384546188 12284670 complement(166422..167513) 1 NC_017319.1 ISSfl4 ORF3 167513 12284670 SFxv_5051 Shigella flexneri 2002017 ISSfl4 ORF3 YP_005712100.1 166422 R 591020 CDS YP_005712101.1 384546189 12284671 complement(167525..168343) 1 NC_017319.1 IS600 ORF2 168343 12284671 SFxv_5052 Shigella flexneri 2002017 IS600 ORF2 YP_005712101.1 167525 R 591020 CDS YP_005712102.1 384546190 12284672 complement(168379..168681) 1 NC_017319.1 IS600 ORF1 168681 12284672 SFxv_5053 Shigella flexneri 2002017 IS600 ORF1 YP_005712102.1 168379 R 591020 CDS YP_005712103.1 384546191 12284673 complement(168733..169290) 1 NC_017319.1 ISSfl4 ORF3 169290 12284673 SFxv_5054 Shigella flexneri 2002017 ISSfl4 ORF3 YP_005712103.1 168733 R 591020 CDS YP_005712104.1 384546192 12284674 complement(169287..169637) 1 NC_017319.1 ISSfl4 ORF2 169637 12284674 SFxv_5055 Shigella flexneri 2002017 ISSfl4 ORF2 YP_005712104.1 169287 R 591020 CDS YP_005712105.1 384546193 12284675 complement(169634..170308) 1 NC_017319.1 ISSfl4 ORF1 170308 12284675 SFxv_5056 Shigella flexneri 2002017 ISSfl4 ORF1 YP_005712105.1 169634 R 591020 CDS YP_005712106.1 384546194 12284676 171136..171774 1 NC_017319.1 hypothetical protein 171774 12284676 SFxv_5057 Shigella flexneri 2002017 hypothetical protein YP_005712106.1 171136 D 591020 CDS YP_005712107.1 384546195 12284677 171862..172047 1 NC_017319.1 IS2 orf1 172047 12284677 SFxv_5058 Shigella flexneri 2002017 IS2 orf1 YP_005712107.1 171862 D 591020 CDS YP_005712108.1 384546196 12284678 172246..172611 1 NC_017319.1 insertion element IS2 repressor InsA 172611 12284678 SFxv_5059 Shigella flexneri 2002017 insertion element IS2 repressor InsA YP_005712108.1 172246 D 591020 CDS YP_005712109.1 384546197 12284679 172569..173420 1 NC_017319.1 IS2 ORF2 173420 12284679 SFxv_5060 Shigella flexneri 2002017 IS2 ORF2 YP_005712109.1 172569 D 591020 CDS YP_005712110.1 384546198 12284680 173413..174042 1 NC_017319.1 ISSfl4 ORF1 174042 12284680 SFxv_5061 Shigella flexneri 2002017 ISSfl4 ORF1 YP_005712110.1 173413 D 591020 CDS YP_005712111.1 384546199 12284681 174039..174386 1 NC_017319.1 ISSfl4 ORF2 174386 12284681 SFxv_5062 Shigella flexneri 2002017 ISSfl4 ORF2 YP_005712111.1 174039 D 591020 CDS YP_005712112.1 384546200 12284682 174406..176007 1 NC_017319.1 ISSfl4 ORF3 176007 12284682 SFxv_5063 Shigella flexneri 2002017 ISSfl4 ORF3 YP_005712112.1 174406 D 591020 CDS YP_005712113.1 384546201 12284683 176196..176429 1 NC_017319.1 IS100 ORF2 176429 12284683 SFxv_5064 Shigella flexneri 2002017 IS100 ORF2 YP_005712113.1 176196 D 591020 CDS YP_005712114.1 384546202 12284684 complement(176481..176660) 1 NC_017319.1 hypothetical protein 176660 12284684 SFxv_5065 Shigella flexneri 2002017 hypothetical protein YP_005712114.1 176481 R 591020 CDS YP_005712115.1 384546203 12284685 complement(176740..176991) 1 NC_017319.1 hypothetical protein 176991 12284685 SFxv_5066 Shigella flexneri 2002017 hypothetical protein YP_005712115.1 176740 R 591020 CDS YP_005712116.1 384546204 12284686 177449..177727 1 NC_017319.1 hypothetical protein 177727 12284686 SFxv_5067 Shigella flexneri 2002017 hypothetical protein YP_005712116.1 177449 D 591020 CDS YP_005712117.1 384546205 12284687 177727..178002 1 NC_017319.1 hypothetical protein 178002 12284687 SFxv_5068 Shigella flexneri 2002017 hypothetical protein YP_005712117.1 177727 D 591020 CDS YP_005712118.1 384546206 12284688 178055..178234 1 NC_017319.1 hypothetical protein 178234 12284688 SFxv_5069 Shigella flexneri 2002017 hypothetical protein YP_005712118.1 178055 D 591020 CDS YP_005712119.1 384546207 12284689 complement(178228..178731) 1 NC_017319.1 IS1 ORF2 178731 12284689 SFxv_5070 Shigella flexneri 2002017 IS1 ORF2 YP_005712119.1 178228 R 591020 CDS YP_005712120.1 384546208 12284690 complement(178742..178933) 1 NC_017319.1 putative iso-IS1 orf 178933 12284690 SFxv_5071 Shigella flexneri 2002017 putative iso-IS1 orf YP_005712120.1 178742 R 591020 CDS YP_005712121.1 384546209 12284691 179017..179535 1 NC_017319.1 putative IS orf 179535 12284691 SFxv_5072 Shigella flexneri 2002017 putative IS orf YP_005712121.1 179017 D 591020 CDS YP_005712122.1 384546210 12284692 179554..179934 1 NC_017319.1 ISSfl4 ORF3 179934 12284692 SFxv_5073 Shigella flexneri 2002017 ISSfl4 ORF3 YP_005712122.1 179554 D 591020 CDS YP_005712123.1 384546211 12284693 180470..180688 1 NC_017319.1 post-segregation antitoxin 180688 ccdA 12284693 ccdA Shigella flexneri 2002017 post-segregation antitoxin YP_005712123.1 180470 D 591020 CDS YP_005712124.1 384546212 12284694 180690..180995 1 NC_017319.1 post-segregation toxin 180995 ccdB 12284694 ccdB Shigella flexneri 2002017 post-segregation toxin YP_005712124.1 180690 D 591020 CDS YP_005712125.1 384546213 12284695 181388..183025 1 NC_017319.1 invasion plasmid antigen, secreted by the Mxi-Spa secretion machinery 183025 ipaH9.8 12284695 ipaH9.8 Shigella flexneri 2002017 invasion plasmid antigen, secreted by the Mxi-Spa secretion machinery YP_005712125.1 181388 D 591020 CDS YP_005712126.1 384546214 12284696 183233..183388 1 NC_017319.1 hypothetical protein 183388 12284696 SFxv_5077 Shigella flexneri 2002017 hypothetical protein YP_005712126.1 183233 D 591020 CDS YP_005712127.1 384546215 12284697 183576..183725 1 NC_017319.1 hypothetical protein 183725 12284697 SFxv_5078 Shigella flexneri 2002017 hypothetical protein YP_005712127.1 183576 D 591020 CDS YP_005712128.1 384546216 12284698 183754..184344 1 NC_017319.1 protein OspG 184344 ospG 12284698 ospG Shigella flexneri 2002017 protein OspG YP_005712128.1 183754 D 591020 CDS YP_005712129.1 384546217 12284699 complement(184412..184591) 1 NC_017319.1 plasmid mobilization protein 184591 mob9 12284699 mob9 Shigella flexneri 2002017 plasmid mobilization protein YP_005712129.1 184412 R 591020 CDS YP_005712130.1 384546218 12284700 184800..184991 1 NC_017319.1 putative IS orf 184991 12284700 SFxv_5081 Shigella flexneri 2002017 putative IS orf YP_005712130.1 184800 D 591020 CDS YP_005712131.1 384546219 12284701 185048..186349 1 NC_017319.1 IS4 ORF 186349 12284701 SFxv_5082 Shigella flexneri 2002017 IS4 ORF YP_005712131.1 185048 D 591020 CDS YP_005712132.1 384546220 12284702 186406..186681 1 NC_017319.1 IS629 orfA 186681 12284702 SFxv_5083 Shigella flexneri 2002017 IS629 orfA YP_005712132.1 186406 D 591020 CDS YP_005712133.1 384546221 12284703 186896..187564 1 NC_017319.1 IS629 ORF2 187564 12284703 SFxv_5084 Shigella flexneri 2002017 IS629 ORF2 YP_005712133.1 186896 D 591020 CDS YP_005712134.1 384546222 12284704 187548..187685 1 NC_017319.1 IS4 ORF 187685 12284704 SFxv_5085 Shigella flexneri 2002017 IS4 ORF YP_005712134.1 187548 D 591020 CDS YP_005712135.1 384546223 12284705 complement(187696..187938) 1 NC_017319.1 putative transposase 187938 12284705 SFxv_5086 Shigella flexneri 2002017 putative transposase YP_005712135.1 187696 R 591020 CDS YP_005712136.1 384546224 12284706 188036..188254 1 NC_017319.1 IS3 ORF2 188254 12284706 SFxv_5087 Shigella flexneri 2002017 IS3 ORF2 YP_005712136.1 188036 D 591020 CDS YP_005712137.1 384546225 12284707 complement(188242..191154) 1 NC_017319.1 hypothetical protein 191154 12284707 SFxv_5088 Shigella flexneri 2002017 hypothetical protein YP_005712137.1 188242 R 591020 CDS YP_005712138.1 384546226 12284708 191658..192479 1 NC_017319.1 putative carbohydrate transport protein 192479 12284708 SFxv_5089 Shigella flexneri 2002017 putative carbohydrate transport protein YP_005712138.1 191658 D 591020 CDS YP_005712139.1 384546227 12284709 192482..193570 1 NC_017319.1 UDP-sugar hydrolase 193570 rfbU 12284709 rfbU Shigella flexneri 2002017 UDP-sugar hydrolase YP_005712139.1 192482 D 591020 CDS YP_005712140.1 384546228 12284710 193575..194525 1 NC_017319.1 VirK, required for proper localization of IcsA (VirG) at the surface of bacteria 194525 virK 12284710 virK Shigella flexneri 2002017 VirK, required for proper localization of IcsA (VirG) at the surface of bacteria YP_005712140.1 193575 D 591020 CDS YP_005712141.1 384546229 12284711 194590..195534 1 NC_017319.1 ipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 195534 msbB2 12284711 msbB2 Shigella flexneri 2002017 ipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase YP_005712141.1 194590 D 591020 CDS YP_005712142.1 384546230 12284712 complement(195688..196644) 1 NC_017319.1 IS630 ORF 196644 12284712 SFxv_5093 Shigella flexneri 2002017 IS630 ORF YP_005712142.1 195688 R 591020 CDS YP_005712143.1 384546231 12284713 complement(196656..197474) 1 NC_017319.1 IS600 ORF2 197474 12284713 SFxv_5094 Shigella flexneri 2002017 IS600 ORF2 YP_005712143.1 196656 R 591020 CDS YP_005712144.1 384546232 12284714 complement(197510..197812) 1 NC_017319.1 IS600 ORF1 197812 12284714 SFxv_5095 Shigella flexneri 2002017 IS600 ORF1 YP_005712144.1 197510 R 591020 CDS YP_005712145.1 384546233 12284715 197905..198036 1 NC_017319.1 TraD protein 198036 traD 12284715 traD Shigella flexneri 2002017 TraD protein YP_005712145.1 197905 D 591020 CDS YP_005712146.1 384546234 12284716 complement(198045..198443) 1 NC_017319.1 plasmid maintenance protein 198443 mvpA 12284716 mvpA Shigella flexneri 2002017 plasmid maintenance protein YP_005712146.1 198045 R 591020 CDS YP_005712147.1 384546235 12284717 complement(198443..198670) 1 NC_017319.1 plasmid maintenance protein 198670 mvpT 12284717 mvpT Shigella flexneri 2002017 plasmid maintenance protein YP_005712147.1 198443 R 591020 CDS YP_005712148.1 384546236 12284718 198752..199123 1 NC_017319.1 OriT nicking and unwinding protein 199123 12284718 SFxv_5099 Shigella flexneri 2002017 OriT nicking and unwinding protein YP_005712148.1 198752 D 591020 CDS YP_005712149.1 384546237 12284719 199144..200508 1 NC_017319.1 OriT nicking and unwinding protein 200508 12284719 SFxv_5100 Shigella flexneri 2002017 OriT nicking and unwinding protein YP_005712149.1 199144 D 591020 CDS YP_005712150.1 384546238 12284720 200505..203954 1 NC_017319.1 OriT nicking and unwinding protein 203954 12284720 SFxv_5101 Shigella flexneri 2002017 OriT nicking and unwinding protein YP_005712150.1 200505 D 591020 CDS YP_005712151.1 384546239 12284721 203974..204726 1 NC_017319.1 F pilin acetylation protein 204726 traX 12284721 traX Shigella flexneri 2002017 F pilin acetylation protein YP_005712151.1 203974 D 591020 CDS YP_005712152.1 384546240 12284722 204730..205341 1 NC_017319.1 FinO, putative fertility inhibition protein 205341 finO 12284722 finO Shigella flexneri 2002017 FinO, putative fertility inhibition protein YP_005712152.1 204730 D 591020 CDS YP_005712153.1 384546241 12284723 205472..205684 1 NC_017319.1 hypothetical protein 205684 12284723 SFxv_5104 Shigella flexneri 2002017 hypothetical protein YP_005712153.1 205472 D 591020 CDS YP_005712154.1 384546242 12284724 205868..206170 1 NC_017319.1 hypothetical protein 206170 12284724 SFxv_5105 Shigella flexneri 2002017 hypothetical protein YP_005712154.1 205868 D 591020 CDS YP_005712155.1 384546243 12284725 complement(206211..207029) 1 NC_017319.1 IS600 ORF2 207029 12284725 SFxv_5106 Shigella flexneri 2002017 IS600 ORF2 YP_005712155.1 206211 R 591020 CDS YP_005712156.1 384546244 12284726 complement(207065..207367) 1 NC_017319.1 IS600 ORF1 207367 12284726 SFxv_5107 Shigella flexneri 2002017 IS600 ORF1 YP_005712156.1 207065 R 591020 CDS YP_005712157.1 384546245 12284727 207489..207656 1 NC_017319.1 hypothetical protein 207656 12284727 SFxv_5108 Shigella flexneri 2002017 hypothetical protein YP_005712157.1 207489 D 591020 CDS YP_005712158.1 384546246 12284728 207702..207911 1 NC_017319.1 putative regulator 207911 12284728 SFxv_5109 Shigella flexneri 2002017 putative regulator YP_005712158.1 207702 D 591020 CDS YP_005712159.1 384546247 12284729 207950..208540 1 NC_017319.1 hypothetical protein 208540 12284729 SFxv_5110 Shigella flexneri 2002017 hypothetical protein YP_005712159.1 207950 D 591020 CDS YP_005712160.1 384546248 12284730 208849..209040 1 NC_017319.1 RepB protein 209040 repB 12284730 repB Shigella flexneri 2002017 RepB protein YP_005712160.1 208849 D 591020 CDS YP_005712161.1 384546249 12284731 209331..210188 1 NC_017319.1 RepA 210188 repA 12284731 repA Shigella flexneri 2002017 RepA YP_005712161.1 209331 D 591020 CDS YP_005712162.1 384546250 12284732 210889..211080 1 NC_017319.1 hypothetical protein 211080 12284732 SFxv_5113 Shigella flexneri 2002017 hypothetical protein YP_005712162.1 210889 D 591020 CDS YP_005712163.1 384546251 12284733 complement(211310..211573) 1 NC_017319.1 IS1294 transposase 211573 12284733 SFxv_5114 Shigella flexneri 2002017 IS1294 transposase YP_005712163.1 211310 R 591020 CDS YP_005712164.1 384546252 12284734 complement(211681..212505) 1 NC_017319.1 IS1294 transposase 212505 12284734 SFxv_5115 Shigella flexneri 2002017 IS1294 transposase YP_005712164.1 211681 R 591020 CDS YP_005712165.1 384546253 12284735 complement(212515..212703) 1 NC_017319.1 IS1294 transposase 212703 12284735 SFxv_5116 Shigella flexneri 2002017 IS1294 transposase YP_005712165.1 212515 R 591020 CDS YP_005712166.1 384546254 12284736 212849..213016 1 NC_017319.1 putative transposase 213016 12284736 SFxv_5117 Shigella flexneri 2002017 putative transposase YP_005712166.1 212849 D 591020 CDS YP_005712167.1 384546255 12284737 complement(213034..214761) 1 NC_017319.1 invasion plasmid antigen, secreted by the Mxi-Spa secretion machinery 214761 ipaH1.4 12284737 ipaH1.4 Shigella flexneri 2002017 invasion plasmid antigen, secreted by the Mxi-Spa secretion machinery YP_005712167.1 213034 R 591020 CDS YP_005712168.1 384546256 12284738 complement(215151..215417) 1 NC_017319.1 OspE1 215417 ospE1 12284738 ospE1 Shigella flexneri 2002017 OspE1 YP_005712168.1 215151 R 591020 CDS YP_005712169.1 384546257 12284739 complement(215474..215665) 1 NC_017319.1 putative transposase 215665 12284739 SFxv_5120 Shigella flexneri 2002017 putative transposase YP_005712169.1 215474 R 591020 CDS YP_005712170.1 384546258 12284740 216256..216558 1 NC_017319.1 IS600 ORF1 216558 12284740 SFxv_5121 Shigella flexneri 2002017 IS600 ORF1 YP_005712170.1 216256 D 591020 CDS YP_005712171.1 384546259 12284741 216594..216782 1 NC_017319.1 IS600 ORF2 216782 12284741 SFxv_5122 Shigella flexneri 2002017 IS600 ORF2 YP_005712171.1 216594 D 591020 CDS YP_005712172.1 384546260 12284742 complement(216822..217172) 1 NC_017319.1 IS629 ORF2 217172 12284742 SFxv_5123 Shigella flexneri 2002017 IS629 ORF2 YP_005712172.1 216822 R 591020 CDS YP_005712173.1 384546261 12284743 217234..217536 1 NC_017319.1 IS911 ORF1 217536 12284743 SFxv_5124 Shigella flexneri 2002017 IS911 ORF1 YP_005712173.1 217234 D 591020 CDS YP_005712174.1 384546262 12284744 217583..218233 1 NC_017319.1 IS911 ORF2 218233 12284744 SFxv_5125 Shigella flexneri 2002017 IS911 ORF2 YP_005712174.1 217583 D 591020 CDS YP_005712175.1 384546263 12284745 218309..218674 1 NC_017319.1 insertion element IS2 repressor InsA 218674 12284745 SFxv_5126 Shigella flexneri 2002017 insertion element IS2 repressor InsA YP_005712175.1 218309 D 591020 CDS YP_005712176.1 384546264 12284746 218632..219537 1 NC_017319.1 insertion element IS2 transposase InsD 219537 12284746 SFxv_5127 Shigella flexneri 2002017 insertion element IS2 transposase InsD YP_005712176.1 218632 D 591020 CDS YP_005712177.1 384546265 12284747 complement(219764..219919) 1 NC_017319.1 hypothetical protein 219919 12284747 SFxv_5128 Shigella flexneri 2002017 hypothetical protein YP_005712177.1 219764 R 591020 CDS YP_005712178.1 384546266 12284748 complement(219891..220475) 1 NC_017319.1 hypothetical protein 220475 12284748 SFxv_5129 Shigella flexneri 2002017 hypothetical protein YP_005712178.1 219891 R 591020 CDS YP_005712179.1 384546267 12284749 complement(220947..221084) 1 NC_017319.1 hypothetical protein 221084 12284749 SFxv_5130 Shigella flexneri 2002017 hypothetical protein YP_005712179.1 220947 R 591020 CDS YP_005712180.1 384546268 12284750 222013..222993 1 NC_017319.1 outer membrane protease 222993 icsP 12284750 icsP Shigella flexneri 2002017 outer membrane protease YP_005712180.1 222013 D 591020 CDS YP_005712181.1 384541570 12228406 102..398 1 NC_017320.1 hypothetical protein 398 12228406 SFxv_5132 Shigella flexneri 2002017 hypothetical protein YP_005712181.1 102 D 591020 CDS YP_005712182.1 384541571 12228407 414..692 1 NC_017320.1 putitative mobilisation protein 692 12228407 SFxv_5133 Shigella flexneri 2002017 putitative mobilisation protein YP_005712182.1 414 D 591020 CDS YP_005712183.1 384541572 12228408 680..1246 1 NC_017320.1 replication initiation protein 1246 12228408 SFxv_5134 Shigella flexneri 2002017 replication initiation protein YP_005712183.1 680 D 591020 CDS YP_005712184.1 384541573 12228409 complement(1523..3043) 1 NC_017320.1 sulfatase 3043 12228409 SFxv_5135 Shigella flexneri 2002017 sulfatase YP_005712184.1 1523 R 591020 CDS YP_005712185.1 384541574 12228410 complement(3456..3584) 1 NC_017320.1 hypothetical protein 3584 12228410 SFxv_5136 Shigella flexneri 2002017 hypothetical protein YP_005712185.1 3456 R 591020 CDS YP_005712186.1 384541575 12228411 4272..4421 1 NC_017320.1 hypothetical protein 4421 12228411 SFxv_5137 Shigella flexneri 2002017 hypothetical protein YP_005712186.1 4272 D 591020 CDS YP_005712187.1 384541576 12228412 4806..5174 1 NC_017320.1 hypothetical protein 5174 12228412 SFxv_5138 Shigella flexneri 2002017 hypothetical protein YP_005712187.1 4806 D 591020 CDS YP_005712188.1 384541577 12228413 5311..5481 1 NC_017320.1 hypothetical protein 5481 12228413 SFxv_5139 Shigella flexneri 2002017 hypothetical protein YP_005712188.1 5311 D 591020 CDS YP_005712189.1 384541578 12228414 complement(5571..5888) 1 NC_017320.1 putative lipoprotein 5888 12228414 SFxv_5140 Shigella flexneri 2002017 putative lipoprotein YP_005712189.1 5571 R 591020 CDS YP_005712190.1 384541579 12228415 complement(6026..6343) 1 NC_017320.1 hypothetical protein 6343 12228415 SFxv_5141 Shigella flexneri 2002017 hypothetical protein YP_005712190.1 6026 R 591020 CDS YP_005712191.1 384541580 12228416 complement(6440..6718) 1 NC_017320.1 hypothetical protein 6718 12228416 SFxv_5142 Shigella flexneri 2002017 hypothetical protein YP_005712191.1 6440 R 591020 CDS YP_005712192.1 384545955 12228418 complement(477..602) 1 NC_017321.1 hypothetical protein 602 12228418 SFxv_5151 Shigella flexneri 2002017 hypothetical protein YP_005712192.1 477 R 591020 CDS YP_005712193.1 384545956 12228419 835..2448 1 NC_017321.1 MobA 2448 mobA 12228419 mobA Shigella flexneri 2002017 MobA YP_005712193.1 835 D 591020 CDS YP_005712194.1 384545957 12228420 complement(2887..3354) 1 NC_017321.1 hypothetical protein 3354 12228420 SFxv_5153 Shigella flexneri 2002017 hypothetical protein YP_005712194.1 2887 R 591020 CDS YP_005712195.1 384545958 12228421 complement(3390..3560) 1 NC_017321.1 hypothetical protein 3560 12228421 SFxv_5154 Shigella flexneri 2002017 hypothetical protein YP_005712195.1 3390 R 591020 CDS YP_005725643.1 384541582 12317632 336..2798 1 NC_017328.1 Bifunctional aspartokinase/homoserine dehydrogenase I (AKI-HDI) 2798 thrA 12317632 thrA Shigella flexneri 2002017 Bifunctional aspartokinase/homoserine dehydrogenase I (AKI-HDI) YP_005725643.1 336 D 591020 CDS YP_005725644.1 384541583 12320377 2800..3732 1 NC_017328.1 Homoserine kinase 3732 thrB 12320377 thrB Shigella flexneri 2002017 Homoserine kinase YP_005725644.1 2800 D 591020 CDS YP_005725645.1 384541584 12320445 3733..5019 1 NC_017328.1 Threonine synthase 5019 thrC 12320445 thrC Shigella flexneri 2002017 Threonine synthase YP_005725645.1 3733 D 591020 CDS YP_005725646.1 384541585 12320478 complement(5309..5536) 1 NC_017328.1 hypothetical protein 5536 12320478 SFxv_0004 Shigella flexneri 2002017 hypothetical protein YP_005725646.1 5309 R 591020 CDS YP_005725647.1 384541586 12320480 complement(5682..6458) 1 NC_017328.1 yaaA 6458 yaaA 12320480 yaaA Shigella flexneri 2002017 yaaA YP_005725647.1 5682 R 591020 CDS YP_005725648.1 384541587 12320484 8237..9190 1 NC_017328.1 Transaldolase B 9190 talB 12320484 talB Shigella flexneri 2002017 Transaldolase B YP_005725648.1 8237 D 591020 CDS YP_005725649.1 384541588 12320568 9302..9892 1 NC_017328.1 Molybdopterin biosynthesis mog protein 9892 mog 12320568 mog Shigella flexneri 2002017 Molybdopterin biosynthesis mog protein YP_005725649.1 9302 D 591020 CDS YP_005725650.1 384541589 12320570 complement(9927..10493) 1 NC_017328.1 Inner membrane protein yaaH 10493 yaaH 12320570 yaaH Shigella flexneri 2002017 Inner membrane protein yaaH YP_005725650.1 9927 R 591020 CDS YP_005725651.1 384541590 12319759 complement(10642..11355) 1 NC_017328.1 yaaW 11355 yaaW 12319759 yaaW Shigella flexneri 2002017 yaaW YP_005725651.1 10642 R 591020 CDS YP_005725652.1 384541591 12319760 10715..11314 1 NC_017328.1 Positive regulator for sigma 32 heat shock promoters 11314 12319760 SFxv_0010 Shigella flexneri 2002017 Positive regulator for sigma 32 heat shock promoters YP_005725652.1 10715 D 591020 CDS YP_005725653.1 384541592 12319761 complement(11381..11785) 1 NC_017328.1 yaaI precursor 11785 yaaI 12319761 yaaI Shigella flexneri 2002017 yaaI precursor YP_005725653.1 11381 R 591020 CDS YP_005725654.1 384541593 12319762 12162..14078 1 NC_017328.1 chaperone protein dnaK 14078 dnaK 12319762 dnaK Shigella flexneri 2002017 chaperone protein dnaK YP_005725654.1 12162 D 591020 CDS YP_005725655.1 384541594 12319763 14167..15297 1 NC_017328.1 Chaperone with DnaK 15297 dnaJ 12319763 dnaJ Shigella flexneri 2002017 Chaperone with DnaK YP_005725655.1 14167 D 591020 CDS YP_005725656.1 384541595 12319764 complement(15401..15610) 1 NC_017328.1 Regulatory protein mokC 15610 mokC 12319764 mokC Shigella flexneri 2002017 Regulatory protein mokC YP_005725656.1 15401 R 591020 CDS YP_005725657.1 384541596 12319765 16139..17305 1 NC_017328.1 Na+/H+ antiporter NhaA precursor 17305 nhaA 12319765 nhaA Shigella flexneri 2002017 Na+/H+ antiporter NhaA precursor YP_005725657.1 16139 D 591020 CDS YP_005725658.1 384541597 12319766 17365..18270 1 NC_017328.1 Transcriptional activator protein nhaR (Na(+)/H(+) antiporter regulatory protein) 18270 nhaR 12319766 nhaR Shigella flexneri 2002017 Transcriptional activator protein nhaR (Na(+)/H(+) antiporter regulatory protein) YP_005725658.1 17365 D 591020 CDS YP_005725659.1 384541598 12319767 complement(18683..19186) 1 NC_017328.1 IS600 ORF1 19186 12319767 SFxv_0019 Shigella flexneri 2002017 IS600 ORF1 YP_005725659.1 18683 R 591020 CDS YP_005725660.1 384541599 12319768 19300..19464 1 NC_017328.1 IS600 ORF2 19464 12319768 SFxv_0020 Shigella flexneri 2002017 IS600 ORF2 YP_005725660.1 19300 D 591020 CDS YP_005725661.1 384541600 12319769 complement(19795..20031) 1 NC_017328.1 30S ribosomal protein S20 20031 rpsT 12319769 rpsT Shigella flexneri 2002017 30S ribosomal protein S20 YP_005725661.1 19795 R 591020 CDS YP_005725662.1 384541601 12319770 20134..20352 1 NC_017328.1 hypothetical protein 20352 12319770 SFxv_0022 Shigella flexneri 2002017 hypothetical protein YP_005725662.1 20134 D 591020 CDS YP_005725663.1 384541602 12319771 20360..21301 1 NC_017328.1 bifunctional riboflavin kinase/FMN adenylyltransferase 21301 ribF 12319771 ribF Shigella flexneri 2002017 bifunctional riboflavin kinase/FMN adenylyltransferase YP_005725663.1 20360 D 591020 CDS YP_005725664.1 384541603 12319772 21344..24160 1 NC_017328.1 isoleucyl-tRNA synthetase 24160 ileS 12319772 ileS Shigella flexneri 2002017 isoleucyl-tRNA synthetase YP_005725664.1 21344 D 591020 CDS YP_005725665.1 384541604 12319773 24160..24654 1 NC_017328.1 lipoprotein signal peptidase 24654 lspA 12319773 lspA Shigella flexneri 2002017 lipoprotein signal peptidase YP_005725665.1 24160 D 591020 CDS YP_005725666.1 384541605 12319774 24741..25190 1 NC_017328.1 FKBP-type peptidyl-prolyl cis-trans isomerase 25190 fkpB 12319774 fkpB Shigella flexneri 2002017 FKBP-type peptidyl-prolyl cis-trans isomerase YP_005725666.1 24741 D 591020 CDS YP_005725667.1 384541606 12319775 25192..26142 1 NC_017328.1 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 26142 ispH 12319775 ispH Shigella flexneri 2002017 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_005725667.1 25192 D 591020 CDS YP_005725668.1 384541607 12319776 26208..27122 1 NC_017328.1 putative inosine-uridine nucleoside N-ribohydrolase 27122 rihC 12319776 rihC Shigella flexneri 2002017 putative inosine-uridine nucleoside N-ribohydrolase YP_005725668.1 26208 D 591020 CDS YP_005725669.1 384541608 12319777 27289..28110 1 NC_017328.1 Dihydrodipicolinate reductase 28110 dapB 12319777 dapB Shigella flexneri 2002017 Dihydrodipicolinate reductase YP_005725669.1 27289 D 591020 CDS YP_005725670.1 384541609 12319778 28566..29714 1 NC_017328.1 Carbamoyl-phosphate synthetase, glutamine (Small) subunit 29714 carA 12319778 carA Shigella flexneri 2002017 Carbamoyl-phosphate synthetase, glutamine (Small) subunit YP_005725670.1 28566 D 591020 CDS YP_005725671.1 384541610 12319779 29732..32953 1 NC_017328.1 carbamoyl-phosphate synthase large chain 32953 carB 12319779 carB Shigella flexneri 2002017 carbamoyl-phosphate synthase large chain YP_005725671.1 29732 D 591020 CDS YP_005725672.1 384541611 12319780 33110..33610 1 NC_017328.1 Transcriptional regulator of cai operon 33610 caiF 12319780 caiF Shigella flexneri 2002017 Transcriptional regulator of cai operon YP_005725672.1 33110 D 591020 CDS YP_005725673.1 384541612 12319781 complement(33696..34307) 1 NC_017328.1 Carnitine operon protein caiE 34307 caiE 12319781 caiE Shigella flexneri 2002017 Carnitine operon protein caiE YP_005725673.1 33696 R 591020 CDS YP_005725674.1 384541613 12319782 complement(34292..35185) 1 NC_017328.1 carnitinyl-CoA dehydratase 35185 caiD 12319782 caiD Shigella flexneri 2002017 carnitinyl-CoA dehydratase YP_005725674.1 34292 R 591020 CDS YP_005725675.1 384541614 12319783 complement(35186..36754) 1 NC_017328.1 putative crotonobetaine/carnitine-CoA ligase 36754 caiC 12319783 caiC Shigella flexneri 2002017 putative crotonobetaine/carnitine-CoA ligase YP_005725675.1 35186 R 591020 CDS YP_005725676.1 384541615 12319784 complement(36813..38030) 1 NC_017328.1 Crotonobetainyl-CoA:carnitine CoA-transferase 38030 caiB 12319784 caiB Shigella flexneri 2002017 Crotonobetainyl-CoA:carnitine CoA-transferase YP_005725676.1 36813 R 591020 CDS YP_005725677.1 384541616 12319785 complement(38159..39301) 1 NC_017328.1 Crotonobetainyl-CoA dehydrogenase 39301 caiA 12319785 caiA Shigella flexneri 2002017 Crotonobetainyl-CoA dehydrogenase YP_005725677.1 38159 R 591020 CDS YP_005725678.1 384541617 12319786 complement(39332..40846) 1 NC_017328.1 L-carnitine/gamma-butyrobetaine antiporter 40846 caiT 12319786 caiT Shigella flexneri 2002017 L-carnitine/gamma-butyrobetaine antiporter YP_005725678.1 39332 R 591020 CDS YP_005725679.1 384541618 12319787 41202..41972 1 NC_017328.1 Protein fixA 41972 fixA 12319787 fixA Shigella flexneri 2002017 Protein fixA YP_005725679.1 41202 D 591020 CDS YP_005725680.1 384541619 12319789 42979..44265 1 NC_017328.1 Protein fixC 44265 fixC 12319789 fixC Shigella flexneri 2002017 Protein fixC YP_005725680.1 42979 D 591020 CDS YP_005725681.1 384541620 12319790 44262..44549 1 NC_017328.1 Ferredoxin-like protein fixX 44549 fixX 12319790 fixX Shigella flexneri 2002017 Ferredoxin-like protein fixX YP_005725681.1 44262 D 591020 CDS YP_005725682.1 384541621 12319791 44608..46002 1 NC_017328.1 putative transport protein 46002 yaaU 12319791 yaaU Shigella flexneri 2002017 putative transport protein YP_005725682.1 44608 D 591020 CDS YP_005725683.1 384541622 12319792 46050..46580 1 NC_017328.1 Glutathione-regulated potassium-efflux system ancillary protein kefF 46580 kefF 12319792 kefF Shigella flexneri 2002017 Glutathione-regulated potassium-efflux system ancillary protein kefF YP_005725683.1 46050 D 591020 CDS YP_005725684.1 384541623 12319793 46573..48435 1 NC_017328.1 Glutathione-regulated potassium-efflux system protein 48435 kefC 12319793 kefC Shigella flexneri 2002017 Glutathione-regulated potassium-efflux system protein YP_005725684.1 46573 D 591020 CDS YP_005725685.1 384541624 12319794 48516..48629 1 NC_017328.1 dihydrofolate reductase 48629 12319794 SFxv_0046 Shigella flexneri 2002017 dihydrofolate reductase YP_005725685.1 48516 D 591020 CDS YP_005725686.1 384541625 12319795 48626..49105 1 NC_017328.1 Dihydrofolate reductase 49105 folA 12319795 folA Shigella flexneri 2002017 Dihydrofolate reductase YP_005725686.1 48626 D 591020 CDS YP_005725687.1 384541626 12319796 complement(49183..50025) 1 NC_017328.1 bis(5'-nucleosyl)-tetraphosphatase 50025 apaH 12319796 apaH Shigella flexneri 2002017 bis(5'-nucleosyl)-tetraphosphatase YP_005725687.1 49183 R 591020 CDS YP_005725688.1 384541627 12319797 complement(50032..50409) 1 NC_017328.1 Protein apaG 50409 apaG 12319797 apaG Shigella flexneri 2002017 Protein apaG YP_005725688.1 50032 R 591020 CDS YP_005725689.1 384541628 12319798 complement(50412..51233) 1 NC_017328.1 Dimethyladenosine transferase 51233 ksgA 12319798 ksgA Shigella flexneri 2002017 Dimethyladenosine transferase YP_005725689.1 50412 R 591020 CDS YP_005725690.1 384541629 12319799 complement(51230..52219) 1 NC_017328.1 4-hydroxythreonine-4-phosphate dehydrogenase 52219 pdxA 12319799 pdxA Shigella flexneri 2002017 4-hydroxythreonine-4-phosphate dehydrogenase YP_005725690.1 51230 R 591020 CDS YP_005725691.1 384541630 12319800 complement(52219..53505) 1 NC_017328.1 Chaperone surA precursor 53505 surA 12319800 surA Shigella flexneri 2002017 Chaperone surA precursor YP_005725691.1 52219 R 591020 CDS YP_005725692.1 384541631 12319801 complement(53558..55912) 1 NC_017328.1 LPS-assembly protein 55912 imp 12319801 imp Shigella flexneri 2002017 LPS-assembly protein YP_005725692.1 53558 R 591020 CDS YP_005725693.1 384541632 12319802 56167..56982 1 NC_017328.1 DnaJ-like protein djlA 56982 djlA 12319802 djlA Shigella flexneri 2002017 DnaJ-like protein djlA YP_005725693.1 56167 D 591020 CDS YP_005725694.1 384541633 12319803 complement(57099..57815) 1 NC_017328.1 Ribosomal large subunit pseudouridine synthase A 57815 rluA 12319803 rluA Shigella flexneri 2002017 Ribosomal large subunit pseudouridine synthase A YP_005725694.1 57099 R 591020 CDS YP_005725695.1 384541634 12319804 complement(57770..60676) 1 NC_017328.1 RNA polymerase-associated protein rapA 60676 hepA 12319804 hepA Shigella flexneri 2002017 RNA polymerase-associated protein rapA YP_005725695.1 57770 R 591020 CDS YP_005725696.1 384541635 12319805 complement(60841..63192) 1 NC_017328.1 DNA polymerase 63192 polB 12319805 polB Shigella flexneri 2002017 DNA polymerase YP_005725696.1 60841 R 591020 CDS YP_005725697.1 384541636 12319806 complement(63267..63962) 1 NC_017328.1 L-ribulose-5-phosphate 4-epimerase 63962 araD 12319806 araD Shigella flexneri 2002017 L-ribulose-5-phosphate 4-epimerase YP_005725697.1 63267 R 591020 CDS YP_005725698.1 384541637 12319807 complement(64162..65664) 1 NC_017328.1 L-arabinose isomerase 65664 araA 12319807 araA Shigella flexneri 2002017 L-arabinose isomerase YP_005725698.1 64162 R 591020 CDS YP_005725699.1 384541638 12319808 complement(65675..67375) 1 NC_017328.1 ribulokinase 67375 araB 12319808 araB Shigella flexneri 2002017 ribulokinase YP_005725699.1 65675 R 591020 CDS YP_005725700.1 384541639 12319809 67663..68592 1 NC_017328.1 Transcriptional regulator AraC 68592 araC 12319809 araC Shigella flexneri 2002017 Transcriptional regulator AraC YP_005725700.1 67663 D 591020 CDS YP_005725701.1 384541640 12319810 68678..69442 1 NC_017328.1 putative membrane-associated protein 69442 yabI 12319810 yabI Shigella flexneri 2002017 putative membrane-associated protein YP_005725701.1 68678 D 591020 CDS YP_005725702.1 384541641 12319811 complement(69556..70254) 1 NC_017328.1 Thiamine import ATP-binding protein thiQ 70254 thiQ 12319811 thiQ Shigella flexneri 2002017 Thiamine import ATP-binding protein thiQ YP_005725702.1 69556 R 591020 CDS YP_005725703.1 384541642 12319812 complement(70238..71848) 1 NC_017328.1 putative ABC-type Fe3+ transport system, permease component 71848 thiP 12319812 thiP Shigella flexneri 2002017 putative ABC-type Fe3+ transport system, permease component YP_005725703.1 70238 R 591020 CDS YP_005725704.1 384541643 12319813 complement(71824..72819) 1 NC_017328.1 putative ABC-type thiamine transport system, periplasmic component 72819 tbpA 12319813 tbpA Shigella flexneri 2002017 putative ABC-type thiamine transport system, periplasmic component YP_005725704.1 71824 R 591020 CDS YP_005725705.1 384541644 12319814 complement(72851..72970) 1 NC_017328.1 putative lipoprotein 72970 12319814 SFxv_0066 Shigella flexneri 2002017 putative lipoprotein YP_005725705.1 72851 R 591020 CDS YP_005725706.1 384541645 12319815 complement(72971..74626) 1 NC_017328.1 HTH-type transcriptional regulator sgrR 74626 sgrR 12319815 sgrR Shigella flexneri 2002017 HTH-type transcriptional regulator sgrR YP_005725706.1 72971 R 591020 CDS YP_005725707.1 384541646 12319816 74948..76126 1 NC_017328.1 Sugar efflux transporter subfamily 76126 setA 12319816 setA Shigella flexneri 2002017 Sugar efflux transporter subfamily YP_005725707.1 74948 D 591020 CDS YP_005725708.1 384541647 12319817 complement(76175..76780) 1 NC_017328.1 3-isopropylmalate dehydratase small subunit 76780 leuD 12319817 leuD Shigella flexneri 2002017 3-isopropylmalate dehydratase small subunit YP_005725708.1 76175 R 591020 CDS YP_005725709.1 384541648 12319818 complement(76791..78191) 1 NC_017328.1 3-isopropylmalate dehydratase large subunit 78191 leuC 12319818 leuC Shigella flexneri 2002017 3-isopropylmalate dehydratase large subunit YP_005725709.1 76791 R 591020 CDS YP_005725710.1 384541649 12319819 complement(78194..79285) 1 NC_017328.1 3-isopropylmalate dehydrogenase 79285 leuB 12319819 leuB Shigella flexneri 2002017 3-isopropylmalate dehydrogenase YP_005725710.1 78194 R 591020 CDS YP_005725711.1 384541650 12319820 complement(79285..80856) 1 NC_017328.1 2-isopropylmalate synthase 80856 leuA 12319820 leuA Shigella flexneri 2002017 2-isopropylmalate synthase YP_005725711.1 79285 R 591020 CDS YP_005725712.1 384541651 12319821 81517..82638 1 NC_017328.1 putative transcriptional activator for leuABCD operon 82638 leuO 12319821 leuO Shigella flexneri 2002017 putative transcriptional activator for leuABCD operon YP_005725712.1 81517 D 591020 CDS YP_005725713.1 384541652 12319822 82956..84680 1 NC_017328.1 Acetolactate synthase 84680 ilvI 12319822 ilvI Shigella flexneri 2002017 Acetolactate synthase YP_005725713.1 82956 D 591020 CDS YP_005725714.1 384541653 12319823 84653..85174 1 NC_017328.1 Acetolactate synthase III, small subunit 85174 ilvH 12319823 ilvH Shigella flexneri 2002017 Acetolactate synthase III, small subunit YP_005725714.1 84653 D 591020 CDS YP_005725715.1 384541654 12319824 85226..85357 1 NC_017328.1 hypothetical protein 85357 12319824 SFxv_0078 Shigella flexneri 2002017 hypothetical protein YP_005725715.1 85226 D 591020 CDS YP_005725716.1 384541655 12319825 85354..86358 1 NC_017328.1 Fructose repressor 86358 fruR 12319825 fruR Shigella flexneri 2002017 Fructose repressor YP_005725716.1 85354 D 591020 CDS YP_005725717.1 384541656 12319826 complement(86355..86600) 1 NC_017328.1 putative IS1 encoded protein 86600 12319826 SFxv_0080 Shigella flexneri 2002017 putative IS1 encoded protein YP_005725717.1 86355 R 591020 CDS YP_005725718.1 384541657 12319827 86481..86756 1 NC_017328.1 hypothetical protein 86756 12319827 SFxv_0080a Shigella flexneri 2002017 hypothetical protein YP_005725718.1 86481 D 591020 CDS YP_005725719.1 384541658 12319828 86675..87178 1 NC_017328.1 IS1 orfB 87178 12319828 SFxv_0081 Shigella flexneri 2002017 IS1 orfB YP_005725719.1 86675 D 591020 CDS YP_005725720.1 384541659 12319829 87737..88195 1 NC_017328.1 protein mraZ 88195 mraZ 12319829 mraZ Shigella flexneri 2002017 protein mraZ YP_005725720.1 87737 D 591020 CDS YP_005725721.1 384541660 12319830 88197..89138 1 NC_017328.1 S-adenosyl-L-methionine-dependent methyltransferase mraW 89138 mraW 12319830 mraW Shigella flexneri 2002017 S-adenosyl-L-methionine-dependent methyltransferase mraW YP_005725721.1 88197 D 591020 CDS YP_005725722.1 384541661 12319831 89135..89500 1 NC_017328.1 Cell division protein ftsL 89500 ftsL 12319831 ftsL Shigella flexneri 2002017 Cell division protein ftsL YP_005725722.1 89135 D 591020 CDS YP_005725723.1 384541662 12319832 89516..91282 1 NC_017328.1 penicillin-binding protein 3 91282 ftsI 12319832 ftsI Shigella flexneri 2002017 penicillin-binding protein 3 YP_005725723.1 89516 D 591020 CDS YP_005725724.1 384541663 12319833 91269..92756 1 NC_017328.1 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 92756 murE 12319833 murE Shigella flexneri 2002017 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_005725724.1 91269 D 591020 CDS YP_005725725.1 384541664 12319834 92753..94111 1 NC_017328.1 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 94111 murF 12319834 murF Shigella flexneri 2002017 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase YP_005725725.1 92753 D 591020 CDS YP_005725726.1 384541665 12319835 94105..95187 1 NC_017328.1 phospho-N-acetylmuramoyl-pentapeptide- transferase 95187 mraY 12319835 mraY Shigella flexneri 2002017 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_005725726.1 94105 D 591020 CDS YP_005725727.1 384541666 12319836 95190..96506 1 NC_017328.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase 96506 murD 12319836 murD Shigella flexneri 2002017 UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_005725727.1 95190 D 591020 CDS YP_005725728.1 384541667 12319837 96506..97750 1 NC_017328.1 Membrane protein 97750 ftsW 12319837 ftsW Shigella flexneri 2002017 Membrane protein YP_005725728.1 96506 D 591020 CDS YP_005725729.1 384541668 12319838 97747..98814 1 NC_017328.1 UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase 98814 murG 12319838 murG Shigella flexneri 2002017 UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase YP_005725729.1 97747 D 591020 CDS YP_005725730.1 384541669 12319839 98868..100343 1 NC_017328.1 UDP-N-acetylmuramate--L-alanine ligase 100343 murC 12319839 murC Shigella flexneri 2002017 UDP-N-acetylmuramate--L-alanine ligase YP_005725730.1 98868 D 591020 CDS YP_005725731.1 384541670 12319840 100336..101256 1 NC_017328.1 D-alanine--D-alanine ligase 101256 ddlB 12319840 ddlB Shigella flexneri 2002017 D-alanine--D-alanine ligase YP_005725731.1 100336 D 591020 CDS YP_005725732.1 384541671 12319841 101258..102088 1 NC_017328.1 cell division protein 102088 ftsQ 12319841 ftsQ Shigella flexneri 2002017 cell division protein YP_005725732.1 101258 D 591020 CDS YP_005725733.1 384541672 12319842 102085..103347 1 NC_017328.1 Cell division protein ftsA 103347 ftsA 12319842 ftsA Shigella flexneri 2002017 Cell division protein ftsA YP_005725733.1 102085 D 591020 CDS YP_005725734.1 384541673 12319843 103408..104559 1 NC_017328.1 Cell division protein ftsZ 104559 ftsZ 12319843 ftsZ Shigella flexneri 2002017 Cell division protein ftsZ YP_005725734.1 103408 D 591020 CDS YP_005725735.1 384541674 12319844 104660..105577 1 NC_017328.1 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 105577 lpxC 12319844 lpxC Shigella flexneri 2002017 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase YP_005725735.1 104660 D 591020 CDS YP_005725736.1 384541675 12319845 105733..106320 1 NC_017328.1 Secretion monitor protein 106320 secM 12319845 secM Shigella flexneri 2002017 Secretion monitor protein YP_005725736.1 105733 D 591020 CDS YP_005725737.1 384541676 12319846 106382..109087 1 NC_017328.1 preprotein translocase subunit SecA 109087 secA 12319846 secA Shigella flexneri 2002017 preprotein translocase subunit SecA YP_005725737.1 106382 D 591020 CDS YP_005725738.1 384541677 12319847 109147..109536 1 NC_017328.1 7,8-dihydro-8-oxoguanine-triphosphatase 109536 mutT 12319847 mutT Shigella flexneri 2002017 7,8-dihydro-8-oxoguanine-triphosphatase YP_005725738.1 109147 D 591020 CDS YP_005725739.1 384541678 12319848 complement(109551..109685) 1 NC_017328.1 hypothetical protein 109685 12319848 SFxv_0102 Shigella flexneri 2002017 hypothetical protein YP_005725739.1 109551 R 591020 CDS YP_005725740.1 384541679 12319849 complement(109636..109833) 1 NC_017328.1 zinc-binding protein yacG 109833 yacG 12319849 yacG Shigella flexneri 2002017 zinc-binding protein yacG YP_005725740.1 109636 R 591020 CDS YP_005725741.1 384541680 12319850 complement(109843..110586) 1 NC_017328.1 protein yacF 110586 yacF 12319850 yacF Shigella flexneri 2002017 protein yacF YP_005725741.1 109843 R 591020 CDS YP_005725742.1 384541681 12319851 complement(110586..110873) 1 NC_017328.1 dephospho-CoA kinase 110873 coaE 12319851 coaE Shigella flexneri 2002017 dephospho-CoA kinase YP_005725742.1 110586 R 591020 CDS YP_005725743.1 384541682 12319852 111431..112474 1 NC_017328.1 GMP reductase 112474 guaC 12319852 guaC Shigella flexneri 2002017 GMP reductase YP_005725743.1 111431 D 591020 CDS YP_005725744.1 384541683 12319853 complement(112394..112501) 1 NC_017328.1 hypothetical protein 112501 12319853 SFxv_0108 Shigella flexneri 2002017 hypothetical protein YP_005725744.1 112394 R 591020 CDS YP_005725745.1 384541684 12319854 complement(112509..113711) 1 NC_017328.1 hypothetical protein 113711 hofC 12319854 hofC Shigella flexneri 2002017 hypothetical protein YP_005725745.1 112509 R 591020 CDS YP_005725746.1 384541685 12319856 complement(114858..115298) 1 NC_017328.1 Prelipin peptidase dependent protein 115298 ppdD 12319856 ppdD Shigella flexneri 2002017 Prelipin peptidase dependent protein YP_005725746.1 114858 R 591020 CDS YP_005725747.1 384541686 12319857 complement(115501..116394) 1 NC_017328.1 quinolinate phosphoribosyltransferase 116394 nadC 12319857 nadC Shigella flexneri 2002017 quinolinate phosphoribosyltransferase YP_005725747.1 115501 R 591020 CDS YP_005725748.1 384541687 12319858 116482..117033 1 NC_017328.1 AmpD protein 117033 ampD 12319858 ampD Shigella flexneri 2002017 AmpD protein YP_005725748.1 116482 D 591020 CDS YP_005725749.1 384541688 12319859 117030..117884 1 NC_017328.1 Protein ampE 117884 ampE 12319859 ampE Shigella flexneri 2002017 Protein ampE YP_005725749.1 117030 D 591020 CDS YP_005725750.1 384541689 12319860 complement(117927..119300) 1 NC_017328.1 Aromatic amino acid transport protein aroP 119300 aroP 12319860 aroP Shigella flexneri 2002017 Aromatic amino acid transport protein aroP YP_005725750.1 117927 R 591020 CDS YP_005725751.1 384541690 12319861 119841..120605 1 NC_017328.1 Transcriptional regulator for pyruvate dehydrogenase complex 120605 pdhR 12319861 pdhR Shigella flexneri 2002017 Transcriptional regulator for pyruvate dehydrogenase complex YP_005725751.1 119841 D 591020 CDS YP_005725752.1 384541691 12319862 120766..123429 1 NC_017328.1 Pyruvate dehydrogenase E1 component 123429 aceE 12319862 aceE Shigella flexneri 2002017 Pyruvate dehydrogenase E1 component YP_005725752.1 120766 D 591020 CDS YP_005725753.1 384541692 12319863 123444..125324 1 NC_017328.1 Pyruvate dehydrogenase dihydrolipoyltransacetylase component 125324 aceF 12319863 aceF Shigella flexneri 2002017 Pyruvate dehydrogenase dihydrolipoyltransacetylase component YP_005725753.1 123444 D 591020 CDS YP_005725754.1 384541693 12319864 125616..127073 1 NC_017328.1 putative pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component,-like enzyme 127073 lpd 12319864 lpd Shigella flexneri 2002017 putative pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component,-like enzyme YP_005725754.1 125616 D 591020 CDS YP_005725755.1 384541694 12319866 129325..131949 1 NC_017328.1 Aconitate hydratase 2 131949 acnB 12319866 acnB Shigella flexneri 2002017 Aconitate hydratase 2 YP_005725755.1 129325 D 591020 CDS YP_005725756.1 384541695 12319867 132076..132486 1 NC_017328.1 hypothetical protein 132486 yacL 12319867 yacL Shigella flexneri 2002017 hypothetical protein YP_005725756.1 132076 D 591020 CDS YP_005725757.1 384541696 12319868 complement(132524..133318) 1 NC_017328.1 S-adenosylmethionine decarboxylase 133318 speD 12319868 speD Shigella flexneri 2002017 S-adenosylmethionine decarboxylase YP_005725757.1 132524 R 591020 CDS YP_005725758.1 384541697 12319869 complement(133334..134200) 1 NC_017328.1 spermidine synthase 134200 speE 12319869 speE Shigella flexneri 2002017 spermidine synthase YP_005725758.1 133334 R 591020 CDS YP_005725759.1 384541698 12319870 complement(134306..134824) 1 NC_017328.1 hypothetical protein 134824 12319870 SFxv_0126 Shigella flexneri 2002017 hypothetical protein YP_005725759.1 134306 R 591020 CDS YP_005725760.1 384541699 12319871 134819..136369 1 NC_017328.1 Copper oxidase CueO 136369 cueO 12319871 cueO Shigella flexneri 2002017 Copper oxidase CueO YP_005725760.1 134819 D 591020 CDS YP_005725761.1 384541700 12319872 complement(136416..138824) 1 NC_017328.1 glucose dehydrogenase 138824 gcd 12319872 gcd Shigella flexneri 2002017 glucose dehydrogenase YP_005725761.1 136416 R 591020 CDS YP_005725762.1 384541701 12319873 138949..139548 1 NC_017328.1 Hypoxanthine phosphoribosyltransferase 139548 hpt 12319873 hpt Shigella flexneri 2002017 Hypoxanthine phosphoribosyltransferase YP_005725762.1 138949 D 591020 CDS YP_005725763.1 384541702 12319874 complement(139589..140251) 1 NC_017328.1 Carbonic anhydrase 2 140251 can 12319874 can Shigella flexneri 2002017 Carbonic anhydrase 2 YP_005725763.1 139589 R 591020 CDS YP_005725764.1 384541703 12319875 140360..141286 1 NC_017328.1 putative ABC transporter ATP-binding protein 141286 12319875 SFxv_0130 Shigella flexneri 2002017 putative ABC transporter ATP-binding protein YP_005725764.1 140360 D 591020 CDS YP_005725765.1 384541704 12319876 141283..142053 1 NC_017328.1 Inner membrane transport permease 142053 12319876 SFxv_0131 Shigella flexneri 2002017 Inner membrane transport permease YP_005725765.1 141283 D 591020 CDS YP_005725766.1 384541705 12319877 142158..142598 1 NC_017328.1 putative PTS enzyme II B component 142598 12319877 SFxv_0132 Shigella flexneri 2002017 putative PTS enzyme II B component YP_005725766.1 142158 D 591020 CDS YP_005725767.1 384541706 12319878 142662..143891 1 NC_017328.1 putative xylanase/chitin deacetylase 143891 12319878 SFxv_0133 Shigella flexneri 2002017 putative xylanase/chitin deacetylase YP_005725767.1 142662 D 591020 CDS YP_005725768.1 384541707 12319879 complement(143895..144275) 1 NC_017328.1 Aspartate 1-decarboxylase precursor 144275 panD 12319879 panD Shigella flexneri 2002017 Aspartate 1-decarboxylase precursor YP_005725768.1 143895 R 591020 CDS YP_005725769.1 384541708 12319880 144243..144428 1 NC_017328.1 hypothetical protein 144428 12319880 SFxv_0134 Shigella flexneri 2002017 hypothetical protein YP_005725769.1 144243 D 591020 CDS YP_005725770.1 384541709 12319881 144549..145451 1 NC_017328.1 putative transposase 145451 12319881 SFxv_0136 Shigella flexneri 2002017 putative transposase YP_005725770.1 144549 D 591020 CDS YP_005725771.1 384541710 12319882 complement(145525..146376) 1 NC_017328.1 pantothenate synthetase 146376 panC 12319882 panC Shigella flexneri 2002017 pantothenate synthetase YP_005725771.1 145525 R 591020 CDS YP_005725772.1 384541711 12319883 complement(146388..147182) 1 NC_017328.1 3-methyl-2-oxobutanoate hydroxymethyltransferase 147182 panB 12319883 panB Shigella flexneri 2002017 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_005725772.1 146388 R 591020 CDS YP_005725773.1 384541712 12319884 complement(147295..147795) 1 NC_017328.1 putative fimbrial-like protein 147795 12319884 SFxv_0139 Shigella flexneri 2002017 putative fimbrial-like protein YP_005725773.1 147295 R 591020 CDS YP_005725774.1 384541713 12319885 147870..148373 1 NC_017328.1 putative IS1 family transposase 148373 12319885 SFxv_0140 Shigella flexneri 2002017 putative IS1 family transposase YP_005725774.1 147870 D 591020 CDS YP_005725775.1 384541714 12319886 complement(148521..149000) 1 NC_017328.1 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 149000 folK 12319886 folK Shigella flexneri 2002017 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase YP_005725775.1 148521 R 591020 CDS YP_005725776.1 384541715 12319887 complement(148997..150415) 1 NC_017328.1 poly(A) polymerase I 150415 pcnB 12319887 pcnB Shigella flexneri 2002017 poly(A) polymerase I YP_005725776.1 148997 R 591020 CDS YP_005725777.1 384541716 12319888 complement(150454..151380) 1 NC_017328.1 putative tRNA synthetase 151380 yadB 12319888 yadB Shigella flexneri 2002017 putative tRNA synthetase YP_005725777.1 150454 R 591020 CDS YP_005725778.1 384541717 12319889 complement(151417..151872) 1 NC_017328.1 DnaK suppressor protein 151872 dksA 12319889 dksA Shigella flexneri 2002017 DnaK suppressor protein YP_005725778.1 151417 R 591020 CDS YP_005725779.1 384541718 12319890 complement(152050..152754) 1 NC_017328.1 sugar fermentation stimulation protein A 152754 sfsA 12319890 sfsA Shigella flexneri 2002017 sugar fermentation stimulation protein A YP_005725779.1 152050 R 591020 CDS YP_005725780.1 384541719 12319891 complement(152769..153512) 1 NC_017328.1 2'-5' RNA ligase 153512 ligT 12319891 ligT Shigella flexneri 2002017 2'-5' RNA ligase YP_005725780.1 152769 R 591020 CDS YP_005725781.1 384541720 12319892 153328..155802 1 NC_017328.1 Helicase, ATP-dependent 155802 hrpB 12319892 hrpB Shigella flexneri 2002017 Helicase, ATP-dependent YP_005725781.1 153328 D 591020 CDS YP_005725782.1 384541721 12319893 155998..158532 1 NC_017328.1 penicillin-binding protein 1B 158532 mrcB 12319893 mrcB Shigella flexneri 2002017 penicillin-binding protein 1B YP_005725782.1 155998 D 591020 CDS YP_005725783.1 384541722 12319894 complement(158597..158731) 1 NC_017328.1 hypothetical protein 158731 12319894 SFxv_0149 Shigella flexneri 2002017 hypothetical protein YP_005725783.1 158597 R 591020 CDS YP_005725784.1 384541723 12319895 158752..160995 1 NC_017328.1 Outer membrane protein receptor for ferrichrome, colicin M, and phages T1, T5, and phi80 160995 fhuA 12319895 fhuA Shigella flexneri 2002017 Outer membrane protein receptor for ferrichrome, colicin M, and phages T1, T5, and phi80 YP_005725784.1 158752 D 591020 CDS YP_005725785.1 384541724 12319896 161004..161843 1 NC_017328.1 Ferrichrome transport ATP-binding protein FhuC 161843 fhuC 12319896 fhuC Shigella flexneri 2002017 Ferrichrome transport ATP-binding protein FhuC YP_005725785.1 161004 D 591020 CDS YP_005725786.1 384541725 12319897 161843..162733 1 NC_017328.1 Ferrichrome-iron transport protein FhuD 162733 fhuD 12319897 fhuD Shigella flexneri 2002017 Ferrichrome-iron transport protein FhuD YP_005725786.1 161843 D 591020 CDS YP_005725787.1 384541726 12319898 162730..164712 1 NC_017328.1 Ferrichrome-iron transport protein FhuB 164712 fhuB 12319898 fhuB Shigella flexneri 2002017 Ferrichrome-iron transport protein FhuB YP_005725787.1 162730 D 591020 CDS YP_005725788.1 384541727 12319899 complement(164747..166027) 1 NC_017328.1 glutamate-1-semialdehyde 2,1-aminomutase 166027 hemL 12319899 hemL Shigella flexneri 2002017 glutamate-1-semialdehyde 2,1-aminomutase YP_005725788.1 164747 R 591020 CDS YP_005725789.1 384541728 12319900 166252..167673 1 NC_017328.1 H(+)/Cl(-) exchange transporter clcA 167673 clcA 12319900 clcA Shigella flexneri 2002017 H(+)/Cl(-) exchange transporter clcA YP_005725789.1 166252 D 591020 CDS YP_005725790.1 384541729 12319901 167755..168099 1 NC_017328.1 Iron-binding protein erpA 168099 erpA 12319901 erpA Shigella flexneri 2002017 Iron-binding protein erpA YP_005725790.1 167755 D 591020 CDS YP_005725791.1 384541730 12319902 complement(168146..168769) 1 NC_017328.1 hypothetical protein 168769 12319902 SFxv_0157 Shigella flexneri 2002017 hypothetical protein YP_005725791.1 168146 R 591020 CDS YP_005725792.1 384541731 12319903 complement(168807..169634) 1 NC_017328.1 Vitamin B12-binding protein precursor 169634 btuF 12319903 btuF Shigella flexneri 2002017 Vitamin B12-binding protein precursor YP_005725792.1 168807 R 591020 CDS YP_005725793.1 384541732 12319904 complement(169600..170298) 1 NC_017328.1 MTA/SAH nucleosidase 170298 mtn 12319904 mtn Shigella flexneri 2002017 MTA/SAH nucleosidase YP_005725793.1 169600 R 591020 CDS YP_005725794.1 384541733 12319905 170382..171899 1 NC_017328.1 deoxyguanosinetriphosphate triphosphohydrolase 171899 dgt 12319905 dgt Shigella flexneri 2002017 deoxyguanosinetriphosphate triphosphohydrolase YP_005725794.1 170382 D 591020 CDS YP_005725795.1 384541734 12319906 172029..173453 1 NC_017328.1 Periplasmic serine protease Do, heat shock protein HtrA 173453 degP 12319906 degP Shigella flexneri 2002017 Periplasmic serine protease Do, heat shock protein HtrA YP_005725795.1 172029 D 591020 CDS YP_005725796.1 384541735 12319908 complement(174853..175239) 1 NC_017328.1 protein yaeH 175239 yaeH 12319908 yaeH Shigella flexneri 2002017 protein yaeH YP_005725796.1 174853 R 591020 CDS YP_005725797.1 384541736 12319909 complement(175553..176377) 1 NC_017328.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 176377 dapD 12319909 dapD Shigella flexneri 2002017 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase YP_005725797.1 175553 R 591020 CDS YP_005725798.1 384541737 12319910 complement(176408..179080) 1 NC_017328.1 uridylyltransferase 179080 glnD 12319910 glnD Shigella flexneri 2002017 uridylyltransferase YP_005725798.1 176408 R 591020 CDS YP_005725799.1 384541738 12319911 complement(179142..179936) 1 NC_017328.1 Methionine aminopeptidase 179936 map 12319911 map Shigella flexneri 2002017 Methionine aminopeptidase YP_005725799.1 179142 R 591020 CDS YP_005725800.1 384541739 12319912 180106..181029 1 NC_017328.1 30S ribosomal protein S2 181029 rpsB 12319912 rpsB Shigella flexneri 2002017 30S ribosomal protein S2 YP_005725800.1 180106 D 591020 CDS YP_005725801.1 384541740 12319913 complement(180981..181268) 1 NC_017328.1 hypothetical protein 181268 12319913 SFxv_0169 Shigella flexneri 2002017 hypothetical protein YP_005725801.1 180981 R 591020 CDS YP_005725802.1 384541741 12319914 181287..182138 1 NC_017328.1 elongation factor Ts 182138 tsf 12319914 tsf Shigella flexneri 2002017 elongation factor Ts YP_005725802.1 181287 D 591020 CDS YP_005725803.1 384541742 12319915 182285..183010 1 NC_017328.1 uridylate kinase 183010 pyrH 12319915 pyrH Shigella flexneri 2002017 uridylate kinase YP_005725803.1 182285 D 591020 CDS YP_005725804.1 384541743 12319916 183302..183859 1 NC_017328.1 Ribosome recycling factor 183859 frr 12319916 frr Shigella flexneri 2002017 Ribosome recycling factor YP_005725804.1 183302 D 591020 CDS YP_005725805.1 384541744 12319917 183951..185147 1 NC_017328.1 ATPase 185147 dxr 12319917 dxr Shigella flexneri 2002017 ATPase YP_005725805.1 183951 D 591020 CDS YP_005725806.1 384541745 12319918 185333..186094 1 NC_017328.1 undecaprenyl pyrophosphate synthetase 186094 ispU 12319918 ispU Shigella flexneri 2002017 undecaprenyl pyrophosphate synthetase YP_005725806.1 185333 D 591020 CDS YP_005725807.1 384541746 12319919 186215..186964 1 NC_017328.1 phosphatidate cytidylyltransferase 186964 cdsA 12319919 cdsA Shigella flexneri 2002017 phosphatidate cytidylyltransferase YP_005725807.1 186215 D 591020 CDS YP_005725808.1 384541747 12319920 186976..188328 1 NC_017328.1 Regulator of sigma E protease 188328 rseP 12319920 rseP Shigella flexneri 2002017 Regulator of sigma E protease YP_005725808.1 186976 D 591020 CDS YP_005725809.1 384541748 12319921 188358..190790 1 NC_017328.1 Outer membrane protein assembly factor yaeT 190790 bamA 12319921 bamA Shigella flexneri 2002017 Outer membrane protein assembly factor yaeT YP_005725809.1 188358 D 591020 CDS YP_005725810.1 384541749 12319922 190912..191397 1 NC_017328.1 Chaperone protein skp precursor 191397 skp 12319922 skp Shigella flexneri 2002017 Chaperone protein skp precursor YP_005725810.1 190912 D 591020 CDS YP_005725811.1 384541750 12319923 191401..192426 1 NC_017328.1 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 192426 lpxD 12319923 lpxD Shigella flexneri 2002017 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_005725811.1 191401 D 591020 CDS YP_005725812.1 384541751 12319924 192438..192986 1 NC_017328.1 protein FabZ 192986 fabZ 12319924 fabZ Shigella flexneri 2002017 protein FabZ YP_005725812.1 192438 D 591020 CDS YP_005725813.1 384541752 12319925 192990..193778 1 NC_017328.1 Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase 193778 lpxA 12319925 lpxA Shigella flexneri 2002017 Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase YP_005725813.1 192990 D 591020 CDS YP_005725814.1 384541753 12319926 193778..194926 1 NC_017328.1 Lipid-A-disaccharide synthase 194926 lpxB 12319926 lpxB Shigella flexneri 2002017 Lipid-A-disaccharide synthase YP_005725814.1 193778 D 591020 CDS YP_005725815.1 384541754 12319927 194923..195519 1 NC_017328.1 Ribonuclease HII 195519 rnhB 12319927 rnhB Shigella flexneri 2002017 Ribonuclease HII YP_005725815.1 194923 D 591020 CDS YP_005725816.1 384541755 12319928 195556..199038 1 NC_017328.1 DNA polymerase III subunit alpha 199038 dnaE 12319928 dnaE Shigella flexneri 2002017 DNA polymerase III subunit alpha YP_005725816.1 195556 D 591020 CDS YP_005725817.1 384541756 12319929 199051..200010 1 NC_017328.1 Acetyl-CoA carboxylase, carboxytransferase component, alpha subunit 200010 accA 12319929 accA Shigella flexneri 2002017 Acetyl-CoA carboxylase, carboxytransferase component, alpha subunit YP_005725817.1 199051 D 591020 CDS YP_005725818.1 384541757 12319930 200109..202250 1 NC_017328.1 Lysine decarboxylase 2 202250 ldcC 12319930 ldcC Shigella flexneri 2002017 Lysine decarboxylase 2 YP_005725818.1 200109 D 591020 CDS YP_005725819.1 384541758 12319931 202307..202696 1 NC_017328.1 putative lactoylglutathione lyase 202696 yaeR 12319931 yaeR Shigella flexneri 2002017 putative lactoylglutathione lyase YP_005725819.1 202307 D 591020 CDS YP_005725820.1 384541759 12319932 202761..204059 1 NC_017328.1 tRNA(Ile)-lysidine synthase 204059 tilS 12319932 tilS Shigella flexneri 2002017 tRNA(Ile)-lysidine synthase YP_005725820.1 202761 D 591020 CDS YP_005725821.1 384541760 12319933 complement(204108..204368) 1 NC_017328.1 Transcriptional antiterminator, Rof 204368 rof 12319933 rof Shigella flexneri 2002017 Transcriptional antiterminator, Rof YP_005725821.1 204108 R 591020 CDS YP_005725822.1 384541761 12319934 complement(204355..204573) 1 NC_017328.1 hypothetical protein 204573 12319934 SFxv_0190 Shigella flexneri 2002017 hypothetical protein YP_005725822.1 204355 R 591020 CDS YP_005725823.1 384541762 12319935 204721..205266 1 NC_017328.1 hypothetical protein 205266 yaeQ 12319935 yaeQ Shigella flexneri 2002017 hypothetical protein YP_005725823.1 204721 D 591020 CDS YP_005725824.1 384541763 12319936 205263..205685 1 NC_017328.1 Peptidyl-tRNA hydrolase domain protein 205685 yaeJ 12319936 yaeJ Shigella flexneri 2002017 Peptidyl-tRNA hydrolase domain protein YP_005725824.1 205263 D 591020 CDS YP_005725825.1 384541764 12319937 205699..206409 1 NC_017328.1 Copper homeostasis protein 206409 nlpE 12319937 nlpE Shigella flexneri 2002017 Copper homeostasis protein YP_005725825.1 205699 D 591020 CDS YP_005725826.1 384541765 12319938 complement(206564..207397) 1 NC_017328.1 putative lipoprotein 207397 yaeF 12319938 yaeF Shigella flexneri 2002017 putative lipoprotein YP_005725826.1 206564 R 591020 CDS YP_005725827.1 384541766 12319939 complement(207441..209159) 1 NC_017328.1 putative prolyl-tRNA synthetase 209159 proS 12319939 proS Shigella flexneri 2002017 putative prolyl-tRNA synthetase YP_005725827.1 207441 R 591020 CDS YP_005725828.1 384541767 12319940 complement(209270..209977) 1 NC_017328.1 protein yaeB 209977 yaeB 12319940 yaeB Shigella flexneri 2002017 protein yaeB YP_005725828.1 209270 R 591020 CDS YP_005725829.1 384541768 12319941 complement(209974..210378) 1 NC_017328.1 Exopolysaccharide synthesis regulator 210378 rcsF 12319941 rcsF Shigella flexneri 2002017 Exopolysaccharide synthesis regulator YP_005725829.1 209974 R 591020 CDS YP_005725830.1 384541769 12319942 complement(210496..211311) 1 NC_017328.1 D-methionine ABC transporter substrate-binding protein 211311 metQ 12319942 metQ Shigella flexneri 2002017 D-methionine ABC transporter substrate-binding protein YP_005725830.1 210496 R 591020 CDS YP_005725831.1 384541770 12319943 complement(211351..212004) 1 NC_017328.1 D-methionine transport system permease protein metI 212004 metI 12319943 metI Shigella flexneri 2002017 D-methionine transport system permease protein metI YP_005725831.1 211351 R 591020 CDS YP_005725832.1 384541771 12319944 complement(211997..213028) 1 NC_017328.1 Methionine import ATP-binding protein metN 213028 metN 12319944 metN Shigella flexneri 2002017 Methionine import ATP-binding protein metN YP_005725832.1 211997 R 591020 CDS YP_005725833.1 384541772 12319945 213216..213791 1 NC_017328.1 D,D-heptose 1,7-bisphosphate phosphatase 213791 gmhB 12319945 gmhB Shigella flexneri 2002017 D,D-heptose 1,7-bisphosphate phosphatase YP_005725833.1 213216 D 591020 CDS YP_005725834.1 384541773 12319952 219550..220353 1 NC_017328.1 putative aldose reductase 220353 dkgB 12319952 dkgB Shigella flexneri 2002017 putative aldose reductase YP_005725834.1 219550 D 591020 CDS YP_005725835.1 384541774 12319953 complement(220392..221738) 1 NC_017328.1 IS4 ORF 221738 12319953 SFxv_0205 Shigella flexneri 2002017 IS4 ORF YP_005725835.1 220392 R 591020 CDS YP_005725836.1 384541775 12319954 complement(221788..222702) 1 NC_017328.1 putative transcriptional regulator LYSR-type 222702 yafC 12319954 yafC Shigella flexneri 2002017 putative transcriptional regulator LYSR-type YP_005725836.1 221788 R 591020 CDS YP_005725837.1 384541776 12319955 222943..223743 1 NC_017328.1 protein yafD 223743 yafD 12319955 yafD Shigella flexneri 2002017 protein yafD YP_005725837.1 222943 D 591020 CDS YP_005725838.1 384541777 12319956 223821..224591 1 NC_017328.1 Methyltransferase, UbiE/COQ5 family 224591 yafE 12319956 yafE Shigella flexneri 2002017 Methyltransferase, UbiE/COQ5 family YP_005725838.1 223821 D 591020 CDS YP_005725839.1 384541778 12319957 complement(224639..225985) 1 NC_017328.1 Transcriptional regulator for nitrite reductase 225985 mltD 12319957 mltD Shigella flexneri 2002017 Transcriptional regulator for nitrite reductase YP_005725839.1 224639 R 591020 CDS YP_005725840.1 384541779 12319958 complement(226057..226812) 1 NC_017328.1 Hydroxyacylglutathione hydrolase 226812 gloB 12319958 gloB Shigella flexneri 2002017 Hydroxyacylglutathione hydrolase YP_005725840.1 226057 R 591020 CDS YP_005725841.1 384541780 12319959 226843..227568 1 NC_017328.1 hypothetical protein 227568 12319959 SFxv_0211 Shigella flexneri 2002017 hypothetical protein YP_005725841.1 226843 D 591020 CDS YP_005725842.1 384541781 12319960 complement(227565..228143) 1 NC_017328.1 RNase HI 228143 rnhA 12319960 rnhA Shigella flexneri 2002017 RNase HI YP_005725842.1 227565 R 591020 CDS YP_005725843.1 384541782 12319961 228088..228828 1 NC_017328.1 DNA polymerase III subunit epsilon 228828 dnaQ 12319961 dnaQ Shigella flexneri 2002017 DNA polymerase III subunit epsilon YP_005725843.1 228088 D 591020 CDS YP_005725844.1 384541783 12319963 complement(229168..230214) 1 NC_017328.1 putative cytoplasmic protein 230214 12319963 SFxv_0214 Shigella flexneri 2002017 putative cytoplasmic protein YP_005725844.1 229168 R 591020 CDS YP_005725845.1 384541784 12319964 complement(230225..230338) 1 NC_017328.1 putative cytoplasmic protein 230338 12319964 SFxv_0215 Shigella flexneri 2002017 putative cytoplasmic protein YP_005725845.1 230225 R 591020 CDS YP_005725846.1 384541785 12319965 complement(230482..230787) 1 NC_017328.1 Periplasmic chaperone of fimbral assembly machinery 230787 12319965 SFxv_0216 Shigella flexneri 2002017 Periplasmic chaperone of fimbral assembly machinery YP_005725846.1 230482 R 591020 CDS YP_005725847.1 384541786 12319966 complement(230784..232667) 1 NC_017328.1 Outer membrane usher protein 232667 12319966 SFxv_0217 Shigella flexneri 2002017 Outer membrane usher protein YP_005725847.1 230784 R 591020 CDS YP_005725848.1 384541787 12319967 complement(232683..233177) 1 NC_017328.1 SciD protein 233177 12319967 SFxv_0218 Shigella flexneri 2002017 SciD protein YP_005725848.1 232683 R 591020 CDS YP_005725849.1 384541788 12319968 complement(233372..234004) 1 NC_017328.1 SciE protein 234004 12319968 SFxv_0219 Shigella flexneri 2002017 SciE protein YP_005725849.1 233372 R 591020 CDS YP_005725850.1 384541789 12319969 complement(233991..234368) 1 NC_017328.1 SciF protein 234368 12319969 SFxv_0220 Shigella flexneri 2002017 SciF protein YP_005725850.1 233991 R 591020 CDS YP_005725851.1 384541790 12319970 complement(234606..234905) 1 NC_017328.1 SciF protein 234905 12319970 SFxv_0221 Shigella flexneri 2002017 SciF protein YP_005725851.1 234606 R 591020 CDS YP_005725852.1 384541791 12319971 235090..235368 1 NC_017328.1 Insertion element IS2A putative protein 235368 12319971 SFxv_0222 Shigella flexneri 2002017 Insertion element IS2A putative protein YP_005725852.1 235090 D 591020 CDS YP_005725853.1 384541792 12319974 complement(236289..236576) 1 NC_017328.1 hypothetical protein 236576 12319974 SFxv_0226 Shigella flexneri 2002017 hypothetical protein YP_005725853.1 236289 R 591020 CDS YP_005725854.1 384541793 12319975 237463..237822 1 NC_017328.1 IS911 orfA 237822 12319975 SFxv_0227 Shigella flexneri 2002017 IS911 orfA YP_005725854.1 237463 D 591020 CDS YP_005725855.1 384541794 12319976 237816..238871 1 NC_017328.1 putative terminase large subunit 238871 12319976 SFxv_0228 Shigella flexneri 2002017 putative terminase large subunit YP_005725855.1 237816 D 591020 CDS YP_005725856.1 384541795 12319977 238872..241037 1 NC_017328.1 putative packaging glycoprotein 241037 12319977 SFxv_0229 Shigella flexneri 2002017 putative packaging glycoprotein YP_005725856.1 238872 D 591020 CDS YP_005725857.1 384541796 12319978 241051..241962 1 NC_017328.1 putative scaffolding protein 241962 12319978 SFxv_0230 Shigella flexneri 2002017 putative scaffolding protein YP_005725857.1 241051 D 591020 CDS YP_005725858.1 384541797 12319979 241962..243257 1 NC_017328.1 putative coat protein 243257 12319979 SFxv_0231 Shigella flexneri 2002017 putative coat protein YP_005725858.1 241962 D 591020 CDS YP_005725859.1 384541798 12319980 243254..243532 1 NC_017328.1 hypothetical protein 243532 12319980 SFxv_0232 Shigella flexneri 2002017 hypothetical protein YP_005725859.1 243254 D 591020 CDS YP_005725860.1 384541799 12319981 243510..244010 1 NC_017328.1 putative DNA stabilization protein 244010 12319981 SFxv_0233 Shigella flexneri 2002017 putative DNA stabilization protein YP_005725860.1 243510 D 591020 CDS YP_005725861.1 384541800 12319982 244010..245428 1 NC_017328.1 putative packaged DNA stabilization protein 245428 12319982 SFxv_0234 Shigella flexneri 2002017 putative packaged DNA stabilization protein YP_005725861.1 244010 D 591020 CDS YP_005725862.1 384541801 12319983 245428..246276 1 NC_017328.1 putative packaged DNA stabilization protein 246276 12319983 SFxv_0235 Shigella flexneri 2002017 putative packaged DNA stabilization protein YP_005725862.1 245428 D 591020 CDS YP_005725863.1 384541802 12319984 246276..246731 1 NC_017328.1 putative head assembly protein 246731 12319984 SFxv_0236 Shigella flexneri 2002017 putative head assembly protein YP_005725863.1 246276 D 591020 CDS YP_005725864.1 384541803 12319985 247437..248768 1 NC_017328.1 putative prophage DNA injection protein 248768 12319985 SFxv_0237 Shigella flexneri 2002017 putative prophage DNA injection protein YP_005725864.1 247437 D 591020 CDS YP_005725865.1 384541804 12319986 248769..250499 1 NC_017328.1 putative DNA transfer protein 250499 12319986 SFxv_0238 Shigella flexneri 2002017 putative DNA transfer protein YP_005725865.1 248769 D 591020 CDS YP_005725866.1 384541805 12319987 250625..250951 1 NC_017328.1 IS629 ORF1 250951 12319987 SFxv_0239 Shigella flexneri 2002017 IS629 ORF1 YP_005725866.1 250625 D 591020 CDS YP_005725867.1 384541806 12319988 251166..251834 1 NC_017328.1 IS629 ORF2 251834 12319988 SFxv_0241 Shigella flexneri 2002017 IS629 ORF2 YP_005725867.1 251166 D 591020 CDS YP_005725868.1 384541807 12319989 complement(251885..252223) 1 NC_017328.1 Phosphate starvation-inducible protein 252223 psiF 12319989 psiF Shigella flexneri 2002017 Phosphate starvation-inducible protein YP_005725868.1 251885 R 591020 CDS YP_005725869.1 384541808 12319990 complement(252324..253808) 1 NC_017328.1 alkaline phosphatase 253808 phoA 12319990 phoA Shigella flexneri 2002017 alkaline phosphatase YP_005725869.1 252324 R 591020 CDS YP_005725870.1 384541809 12319991 complement(253840..254100) 1 NC_017328.1 hypothetical protein 254100 12319991 SFxv_0244 Shigella flexneri 2002017 hypothetical protein YP_005725870.1 253840 R 591020 CDS YP_005725871.1 384541810 12319992 254563..255657 1 NC_017328.1 D-alanine--D-alanine ligase 255657 ddlA 12319992 ddlA Shigella flexneri 2002017 D-alanine--D-alanine ligase YP_005725871.1 254563 D 591020 CDS YP_005725872.1 384541811 12319993 complement(255681..256025) 1 NC_017328.1 hypothetical protein 256025 12319993 SFxv_0246 Shigella flexneri 2002017 hypothetical protein YP_005725872.1 255681 R 591020 CDS YP_005725873.1 384541812 12319994 256153..256461 1 NC_017328.1 putative inner membrane protein 256461 12319994 SFxv_0247 Shigella flexneri 2002017 putative inner membrane protein YP_005725873.1 256153 D 591020 CDS YP_005725874.1 384541813 12319995 complement(256520..257614) 1 NC_017328.1 hypothetical protein 257614 12319995 SFxv_0248 Shigella flexneri 2002017 hypothetical protein YP_005725874.1 256520 R 591020 CDS YP_005725875.1 384541814 12319996 complement(257627..258847) 1 NC_017328.1 putative ABC-type long-chain fatty acid transport system, fused permease and ATPase components 258847 sbmA 12319996 sbmA Shigella flexneri 2002017 putative ABC-type long-chain fatty acid transport system, fused permease and ATPase components YP_005725875.1 257627 R 591020 CDS YP_005725876.1 384541815 12319997 259199..260356 1 NC_017328.1 Penicillin-binding protein ampH 260356 ampH 12319997 ampH Shigella flexneri 2002017 Penicillin-binding protein ampH YP_005725876.1 259199 D 591020 CDS YP_005725877.1 384541816 12319998 complement(260357..260905) 1 NC_017328.1 putative ranscriptional regulator 260905 12319998 SFxv_0251 Shigella flexneri 2002017 putative ranscriptional regulator YP_005725877.1 260357 R 591020 CDS YP_005725878.1 384541817 12319999 complement(260948..261472) 1 NC_017328.1 Outer membrane autotransporter barrel domain precursor 261472 12319999 SFxv_0252 Shigella flexneri 2002017 Outer membrane autotransporter barrel domain precursor YP_005725878.1 260948 R 591020 CDS YP_005725879.1 384541818 12320000 complement(261495..262307) 1 NC_017328.1 ISEhe3, transposase orfB 262307 12320000 SFxv_0253 Shigella flexneri 2002017 ISEhe3, transposase orfB YP_005725879.1 261495 R 591020 CDS YP_005725880.1 384541819 12320001 complement(262581..263399) 1 NC_017328.1 IS600 ORF2 263399 12320001 SFxv_0254 Shigella flexneri 2002017 IS600 ORF2 YP_005725880.1 262581 R 591020 CDS YP_005725881.1 384541820 12320002 complement(263799..263915) 1 NC_017328.1 Transposase IS3/IS911 family protein 263915 12320002 SFxv_0255 Shigella flexneri 2002017 Transposase IS3/IS911 family protein YP_005725881.1 263799 R 591020 CDS YP_005725882.1 384541821 12320003 complement(263970..264539) 1 NC_017328.1 Outer membrane autotransporter barrel domain precursor 264539 12320003 SFxv_0256 Shigella flexneri 2002017 Outer membrane autotransporter barrel domain precursor YP_005725882.1 263970 R 591020 CDS YP_005725883.1 384541822 12320004 complement(264514..265419) 1 NC_017328.1 IS2 ORF2 265419 12320004 SFxv_0258 Shigella flexneri 2002017 IS2 ORF2 YP_005725883.1 264514 R 591020 CDS YP_005725884.1 384541823 12320005 264943..265374 1 NC_017328.1 IS2 protein 265374 12320005 SFxv_0257 Shigella flexneri 2002017 IS2 protein YP_005725884.1 264943 D 591020 CDS YP_005725885.1 384541824 12320007 266061..266564 1 NC_017328.1 putative IS1 family transposase 266564 12320007 SFxv_0260 Shigella flexneri 2002017 putative IS1 family transposase YP_005725885.1 266061 D 591020 CDS YP_005725886.1 384541825 12320008 complement(266609..266980) 1 NC_017328.1 Outer membrane autotransporter barrel domain precursor 266980 12320008 SFxv_0261 Shigella flexneri 2002017 Outer membrane autotransporter barrel domain precursor YP_005725886.1 266609 R 591020 CDS YP_005725887.1 384541826 12320009 267065..267334 1 NC_017328.1 hypothetical protein 267334 12320009 SFxv_0262 Shigella flexneri 2002017 hypothetical protein YP_005725887.1 267065 D 591020 CDS YP_005725888.1 384541827 12320010 267471..268478 1 NC_017328.1 Delta-aminolevulinic acid dehydratase 268478 hemB 12320010 hemB Shigella flexneri 2002017 Delta-aminolevulinic acid dehydratase YP_005725888.1 267471 D 591020 CDS YP_005725889.1 384541828 12320011 complement(268584..269435) 1 NC_017328.1 taurine dioxygenase 269435 tauD 12320011 tauD Shigella flexneri 2002017 taurine dioxygenase YP_005725889.1 268584 R 591020 CDS YP_005725890.1 384541829 12320012 complement(269432..270259) 1 NC_017328.1 Taurine transport system permease protein 270259 tauC 12320012 tauC Shigella flexneri 2002017 Taurine transport system permease protein YP_005725890.1 269432 R 591020 CDS YP_005725891.1 384541830 12320013 complement(270256..271023) 1 NC_017328.1 Taurine import ATP-binding protein tauB 271023 tauB 12320013 tauB Shigella flexneri 2002017 Taurine import ATP-binding protein tauB YP_005725891.1 270256 R 591020 CDS YP_005725892.1 384541831 12320014 complement(271036..271932) 1 NC_017328.1 Taurine transport system periplasmic protein 271932 tauA 12320014 tauA Shigella flexneri 2002017 Taurine transport system periplasmic protein YP_005725892.1 271036 R 591020 CDS YP_005725893.1 384541832 12320015 complement(272490..272993) 1 NC_017328.1 putative IS1 family transposase 272993 12320015 SFxv_0268 Shigella flexneri 2002017 putative IS1 family transposase YP_005725893.1 272490 R 591020 CDS YP_005725894.1 384541833 12320016 273107..273262 1 NC_017328.1 putative integrase 273262 12320016 SFxv_0269 Shigella flexneri 2002017 putative integrase YP_005725894.1 273107 D 591020 CDS YP_005725895.1 384541834 12320017 273332..274000 1 NC_017328.1 inner membrane protein 274000 ykgH 12320017 ykgH Shigella flexneri 2002017 inner membrane protein YP_005725895.1 273332 D 591020 CDS YP_005725896.1 384541835 12320018 273972..274169 1 NC_017328.1 hypothetical protein 274169 12320018 SFxv_0271 Shigella flexneri 2002017 hypothetical protein YP_005725896.1 273972 D 591020 CDS YP_005725897.1 384541836 12320019 274076..274288 1 NC_017328.1 hypothetical protein 274288 12320019 SFxv_0272 Shigella flexneri 2002017 hypothetical protein YP_005725897.1 274076 D 591020 CDS YP_005725898.1 384541837 12320020 complement(274243..274938) 1 NC_017328.1 putative transporter 274938 ykgG 12320020 ykgG Shigella flexneri 2002017 putative transporter YP_005725898.1 274243 R 591020 CDS YP_005725899.1 384541838 12320021 complement(274931..276358) 1 NC_017328.1 putative electron transport protein ykgF 276358 ykgF 12320021 ykgF Shigella flexneri 2002017 putative electron transport protein ykgF YP_005725899.1 274931 R 591020 CDS YP_005725900.1 384541839 12320022 complement(276369..277088) 1 NC_017328.1 dehydrogenase 277088 ykgE 12320022 ykgE Shigella flexneri 2002017 dehydrogenase YP_005725900.1 276369 R 591020 CDS YP_005725901.1 384541840 12320023 277701..278204 1 NC_017328.1 putative IS1 family transposase 278204 12320023 SFxv_0276 Shigella flexneri 2002017 putative IS1 family transposase YP_005725901.1 277701 D 591020 CDS YP_005725902.1 384541841 12320024 278389..278874 1 NC_017328.1 hypothetical protein 278874 12320024 SFxv_0277 Shigella flexneri 2002017 hypothetical protein YP_005725902.1 278389 D 591020 CDS YP_005725903.1 384541842 12320025 278871..279257 1 NC_017328.1 hypothetical protein 279257 12320025 SFxv_0278 Shigella flexneri 2002017 hypothetical protein YP_005725903.1 278871 D 591020 CDS YP_005725904.1 384541843 12320026 279282..281495 1 NC_017328.1 putative Rhs-family protein 281495 12320026 SFxv_0279 Shigella flexneri 2002017 putative Rhs-family protein YP_005725904.1 279282 D 591020 CDS YP_005725905.1 384541844 12320028 281985..282392 1 NC_017328.1 putative Rhs-family protein 282392 12320028 SFxv_0281 Shigella flexneri 2002017 putative Rhs-family protein YP_005725905.1 281985 D 591020 CDS YP_005725906.1 384541845 12320029 282389..284677 1 NC_017328.1 putative Rhs-family protein 284677 12320029 SFxv_0282 Shigella flexneri 2002017 putative Rhs-family protein YP_005725906.1 282389 D 591020 CDS YP_005725907.1 384541846 12320030 284674..285663 1 NC_017328.1 putative Rhs-family protein 285663 12320030 SFxv_0283 Shigella flexneri 2002017 putative Rhs-family protein YP_005725907.1 284674 D 591020 CDS YP_005725908.1 384541847 12320031 complement(286712..287482) 1 NC_017328.1 putative EC 3.5-type enzyme; putative amidase-type enzyme 287482 yafV 12320031 yafV Shigella flexneri 2002017 putative amidase-type enzyme YP_005725908.1 286712 R 591020 CDS YP_005725909.1 384541848 12320032 287636..288109 1 NC_017328.1 Inhibitor of vertebrate lysozyme precursor 288109 ivy 12320032 ivy Shigella flexneri 2002017 Inhibitor of vertebrate lysozyme precursor YP_005725909.1 287636 D 591020 CDS YP_005725910.1 384541849 12320033 complement(288152..290596) 1 NC_017328.1 putative acyl-CoA dehydrogenase 290596 fadE 12320033 fadE Shigella flexneri 2002017 putative acyl-CoA dehydrogenase YP_005725910.1 288152 R 591020 CDS YP_005725911.1 384541850 12320034 290674..291414 1 NC_017328.1 phosphoheptose isomerase 291414 lpcA 12320034 lpcA Shigella flexneri 2002017 phosphoheptose isomerase YP_005725911.1 290674 D 591020 CDS YP_005725912.1 384541851 12320035 291620..292387 1 NC_017328.1 Glutamine amidotransferase, class-II 292387 yafJ 12320035 yafJ Shigella flexneri 2002017 Glutamine amidotransferase, class-II YP_005725912.1 291620 D 591020 CDS YP_005725913.1 384541852 12320036 complement(292358..293098) 1 NC_017328.1 hypothetical protein 293098 12320036 SFxv_0291 Shigella flexneri 2002017 hypothetical protein YP_005725913.1 292358 R 591020 CDS YP_005725914.1 384541853 12320037 293449..294003 1 NC_017328.1 putative lipoprotein 294003 yafL 12320037 yafL Shigella flexneri 2002017 putative lipoprotein YP_005725914.1 293449 D 591020 CDS YP_005725915.1 384541854 12320038 294179..294676 1 NC_017328.1 hypothetical protein 294676 12320038 SFxv_0293 Shigella flexneri 2002017 hypothetical protein YP_005725915.1 294179 D 591020 CDS YP_005725916.1 384541855 12320039 complement(294893..296632) 1 NC_017328.1 Flagellar biosynthetic protein FlhA 296632 12320039 SFxv_0295 Shigella flexneri 2002017 Flagellar biosynthetic protein FlhA YP_005725916.1 294893 R 591020 CDS YP_005725917.1 384541856 12320040 296577..297362 1 NC_017328.1 putative motility protein 297362 12320040 SFxv_0294 Shigella flexneri 2002017 putative motility protein YP_005725917.1 296577 D 591020 CDS YP_005725918.1 384541857 12320041 297433..298488 1 NC_017328.1 Damage-inducible protein P 298488 dinB 12320041 dinB Shigella flexneri 2002017 Damage-inducible protein P YP_005725918.1 297433 D 591020 CDS YP_005725919.1 384541858 12320042 298540..298833 1 NC_017328.1 Prevent-host-death family protein 298833 yafN 12320042 yafN Shigella flexneri 2002017 Prevent-host-death family protein YP_005725919.1 298540 D 591020 CDS YP_005725920.1 384541859 12320043 298836..299234 1 NC_017328.1 putative toxin YafO 299234 yafO 12320043 yafO Shigella flexneri 2002017 putative toxin YafO YP_005725920.1 298836 D 591020 CDS YP_005725921.1 384541860 12320044 299244..299696 1 NC_017328.1 GNAT family acetyltransferase 299696 yafP 12320044 yafP Shigella flexneri 2002017 GNAT family acetyltransferase YP_005725921.1 299244 D 591020 CDS YP_005725922.1 384541861 12320045 299915..300985 1 NC_017328.1 hypothetical protein 300985 12320045 SFxv_0300 Shigella flexneri 2002017 hypothetical protein YP_005725922.1 299915 D 591020 CDS YP_005725923.1 384541862 12320046 301161..301556 1 NC_017328.1 putative peptide chain release factor H 301556 12320046 SFxv_0301 Shigella flexneri 2002017 putative peptide chain release factor H YP_005725923.1 301161 D 591020 CDS YP_005725924.1 384541863 12320047 complement(301718..303175) 1 NC_017328.1 Aminoacyl-histidine dipeptidase 303175 pepD 12320047 pepD Shigella flexneri 2002017 Aminoacyl-histidine dipeptidase YP_005725924.1 301718 R 591020 CDS YP_005725925.1 384541864 12320048 303437..303895 1 NC_017328.1 xanthine phosphoribosyltransferase 303895 gpt 12320048 gpt Shigella flexneri 2002017 xanthine phosphoribosyltransferase YP_005725925.1 303437 D 591020 CDS YP_005725926.1 384541865 12320049 303987..305231 1 NC_017328.1 esterase frsA 305231 frsA 12320049 frsA Shigella flexneri 2002017 esterase frsA YP_005725926.1 303987 D 591020 CDS YP_005725927.1 384541866 12320050 305418..305690 1 NC_017328.1 Sigma factor-binding protein crl 305690 crl 12320050 crl Shigella flexneri 2002017 Sigma factor-binding protein crl YP_005725927.1 305418 D 591020 CDS YP_005725928.1 384541867 12320051 complement(305729..306784) 1 NC_017328.1 Outer membrane pore protein E 306784 phoE 12320051 phoE Shigella flexneri 2002017 Outer membrane pore protein E YP_005725928.1 305729 R 591020 CDS YP_005725929.1 384541868 12320052 307154..307657 1 NC_017328.1 putative IS1 family transposase 307657 12320052 SFxv_0307 Shigella flexneri 2002017 putative IS1 family transposase YP_005725929.1 307154 D 591020 CDS YP_005725930.1 384541869 12320053 307848..308951 1 NC_017328.1 glutamate 5-kinase 308951 proB 12320053 proB Shigella flexneri 2002017 glutamate 5-kinase YP_005725930.1 307848 D 591020 CDS YP_005725931.1 384541870 12320054 308963..310216 1 NC_017328.1 gamma-glutamyl phosphate reductase 310216 proA 12320054 proA Shigella flexneri 2002017 gamma-glutamyl phosphate reductase YP_005725931.1 308963 D 591020 CDS YP_005725932.1 384541871 12320056 complement(310421..311581) 1 NC_017328.1 phage integrase family site-specific recombinase 311581 12320056 SFxv_0310 Shigella flexneri 2002017 phage integrase family site-specific recombinase YP_005725932.1 310421 R 591020 CDS YP_005725933.1 384541872 12320057 complement(311458..311805) 1 NC_017328.1 xis 311805 12320057 SFxv_0310a Shigella flexneri 2002017 xis YP_005725933.1 311458 R 591020 CDS YP_005725934.1 384541873 12320058 complement(311896..312267) 1 NC_017328.1 hypothetical protein 312267 12320058 SFxv_0310b Shigella flexneri 2002017 hypothetical protein YP_005725934.1 311896 R 591020 CDS YP_005725935.1 384541874 12320059 complement(312341..312520) 1 NC_017328.1 hypothetical protein 312520 12320059 SFxv_0311 Shigella flexneri 2002017 hypothetical protein YP_005725935.1 312341 R 591020 CDS YP_005725936.1 384541875 12320060 complement(312617..313291) 1 NC_017328.1 putative bacteriophage protein 313291 12320060 SFxv_0312 Shigella flexneri 2002017 putative bacteriophage protein YP_005725936.1 312617 R 591020 CDS YP_005725937.1 384541876 12320061 complement(313288..313737) 1 NC_017328.1 hypothetical protein 313737 12320061 SFxv_0313 Shigella flexneri 2002017 hypothetical protein YP_005725937.1 313288 R 591020 CDS YP_005725938.1 384541877 12320062 complement(313857..314024) 1 NC_017328.1 hypothetical protein 314024 12320062 SFxv_0314 Shigella flexneri 2002017 hypothetical protein YP_005725938.1 313857 R 591020 CDS YP_005725939.1 384541878 12320063 complement(314041..314355) 1 NC_017328.1 hypothetical protein 314355 12320063 SFxv_0315 Shigella flexneri 2002017 hypothetical protein YP_005725939.1 314041 R 591020 CDS YP_005725940.1 384541879 12320064 complement(314367..314807) 1 NC_017328.1 hypothetical protein 314807 12320064 SFxv_0316 Shigella flexneri 2002017 hypothetical protein YP_005725940.1 314367 R 591020 CDS YP_005725941.1 384541880 12320065 complement(314833..315735) 1 NC_017328.1 putative phage-related DNA recombination protein 315735 12320065 SFxv_0317 Shigella flexneri 2002017 putative phage-related DNA recombination protein YP_005725941.1 314833 R 591020 CDS YP_005725942.1 384541881 12320066 complement(315732..316043) 1 NC_017328.1 hypothetical protein 316043 12320066 SFxv_0318 Shigella flexneri 2002017 hypothetical protein YP_005725942.1 315732 R 591020 CDS YP_005725943.1 384541882 12320067 complement(316021..316128) 1 NC_017328.1 hypothetical protein 316128 12320067 SFxv_0319 Shigella flexneri 2002017 hypothetical protein YP_005725943.1 316021 R 591020 CDS YP_005725944.1 384541883 12320068 complement(316125..316400) 1 NC_017328.1 ral protein 316400 12320068 SFxv_0321 Shigella flexneri 2002017 ral protein YP_005725944.1 316125 R 591020 CDS YP_005725945.1 384541884 12320069 complement(316980..317288) 1 NC_017328.1 allows full early gene expression; antitermination of transcription at nut site protein 317288 12320069 SFxv_0322 Shigella flexneri 2002017 antitermination of transcription at nut site protein YP_005725945.1 316980 R 591020 CDS YP_005725946.1 384541885 12320070 complement(317642..318337) 1 NC_017328.1 CI protein 318337 12320070 SFxv_0323 Shigella flexneri 2002017 CI protein YP_005725946.1 317642 R 591020 CDS YP_005725947.1 384541886 12320071 318413..318628 1 NC_017328.1 cro protein 318628 12320071 SFxv_0323a Shigella flexneri 2002017 cro protein YP_005725947.1 318413 D 591020 CDS YP_005725948.1 384541887 12320072 318738..319034 1 NC_017328.1 putative regulatory protein CII of bacteriophage 319034 12320072 SFxv_0324 Shigella flexneri 2002017 putative regulatory protein CII of bacteriophage YP_005725948.1 318738 D 591020 CDS YP_005725949.1 384541888 12320073 319067..319228 1 NC_017328.1 Gp53 319228 12320073 SFxv_0325 Shigella flexneri 2002017 Gp53 YP_005725949.1 319067 D 591020 CDS YP_005725950.1 384541889 12320074 319215..320105 1 NC_017328.1 O protein 320105 12320074 SFxv_0326 Shigella flexneri 2002017 O protein YP_005725950.1 319215 D 591020 CDS YP_005725951.1 384541890 12320075 320080..321531 1 NC_017328.1 Replication protein P 321531 12320075 SFxv_0327 Shigella flexneri 2002017 Replication protein P YP_005725951.1 320080 D 591020 CDS YP_005725952.1 384541891 12320076 321531..321629 1 NC_017328.1 Gp56 321629 12320076 SFxv_0327a Shigella flexneri 2002017 Gp56 YP_005725952.1 321531 D 591020 CDS YP_005725953.1 384541892 12320077 321616..321828 1 NC_017328.1 Gp60 321828 12320077 SFxv_0327b Shigella flexneri 2002017 Gp60 YP_005725953.1 321616 D 591020 CDS YP_005725954.1 384541893 12320078 321809..322249 1 NC_017328.1 Protein ninB 322249 12320078 SFxv_0328 Shigella flexneri 2002017 Protein ninB YP_005725954.1 321809 D 591020 CDS YP_005725955.1 384541894 12320079 322246..322419 1 NC_017328.1 NinD protein 322419 12320079 SFxv_0328a Shigella flexneri 2002017 NinD protein YP_005725955.1 322246 D 591020 CDS YP_005725956.1 384541895 12320080 322386..322562 1 NC_017328.1 NinE protein 322562 12320080 SFxv_0328b Shigella flexneri 2002017 NinE protein YP_005725956.1 322386 D 591020 CDS YP_005725957.1 384541896 12320081 322559..322729 1 NC_017328.1 Gp64 322729 12320081 SFxv_0328c Shigella flexneri 2002017 Gp64 YP_005725957.1 322559 D 591020 CDS YP_005725958.1 384541897 12320082 322722..323444 1 NC_017328.1 DNA-binding protein Roi 323444 12320082 SFxv_0329 Shigella flexneri 2002017 DNA-binding protein Roi YP_005725958.1 322722 D 591020 CDS YP_005725959.1 384541898 12320083 323444..323734 1 NC_017328.1 Gp66 323734 12320083 SFxv_0330 Shigella flexneri 2002017 Gp66 YP_005725959.1 323444 D 591020 CDS YP_005725960.1 384541899 12320084 323731..324093 1 NC_017328.1 Holiday-junction resolvase 324093 12320084 SFxv_0331 Shigella flexneri 2002017 Holiday-junction resolvase YP_005725960.1 323731 D 591020 CDS YP_005725961.1 384541900 12320085 324090..324278 1 NC_017328.1 Gp68 324278 12320085 SFxv_0331a Shigella flexneri 2002017 Gp68 YP_005725961.1 324090 D 591020 CDS YP_005725962.1 384541901 12320086 324275..324793 1 NC_017328.1 Q protein 324793 12320086 SFxv_0332 Shigella flexneri 2002017 Q protein YP_005725962.1 324275 D 591020 CDS YP_005725963.1 384541902 12320087 325292..325615 1 NC_017328.1 S protein 325615 12320087 SFxv_0333 Shigella flexneri 2002017 S protein YP_005725963.1 325292 D 591020 CDS YP_005725964.1 384541903 12320088 325599..326075 1 NC_017328.1 R protein 326075 12320088 SFxv_0334 Shigella flexneri 2002017 R protein YP_005725964.1 325599 D 591020 CDS YP_005725965.1 384541904 12320089 326072..326509 1 NC_017328.1 Rz protein 326509 12320089 SFxv_0335 Shigella flexneri 2002017 Rz protein YP_005725965.1 326072 D 591020 CDS YP_005725966.1 384541905 12320090 326497..326649 1 NC_017328.1 hypothetical protein 326649 12320090 SFxv_0335a Shigella flexneri 2002017 hypothetical protein YP_005725966.1 326497 D 591020 CDS YP_005725967.1 384541906 12320091 326854..327339 1 NC_017328.1 hypothetical protein 327339 12320091 SFxv_0335b Shigella flexneri 2002017 hypothetical protein YP_005725967.1 326854 D 591020 CDS YP_005725968.1 384541907 12320092 327473..327547 1 NC_017328.1 hypothetical protein 327547 12320092 SFxv_0335c Shigella flexneri 2002017 hypothetical protein YP_005725968.1 327473 D 591020 CDS YP_005725969.1 384541908 12320093 327588..327830 1 NC_017328.1 Gene 67 protein 327830 12320093 SFxv_0336 Shigella flexneri 2002017 Gene 67 protein YP_005725969.1 327588 D 591020 CDS YP_005725970.1 384541909 12320094 327832..328011 1 NC_017328.1 hypothetical protein 328011 12320094 SFxv_0337 Shigella flexneri 2002017 hypothetical protein YP_005725970.1 327832 D 591020 CDS YP_005725971.1 384541910 12320095 328233..328523 1 NC_017328.1 Packaging protein gp3 328523 12320095 SFxv_0338 Shigella flexneri 2002017 Packaging protein gp3 YP_005725971.1 328233 D 591020 CDS YP_005725972.1 384541911 12320096 328675..330000 1 NC_017328.1 Gp2-like protein 330000 12320096 SFxv_0339 Shigella flexneri 2002017 Gp2-like protein YP_005725972.1 328675 D 591020 CDS YP_005725973.1 384541912 12320097 330001..332166 1 NC_017328.1 putative packaging glycoprotein 332166 12320097 SFxv_0340 Shigella flexneri 2002017 putative packaging glycoprotein YP_005725973.1 330001 D 591020 CDS YP_005725974.1 384541913 12320098 332180..333091 1 NC_017328.1 putative scaffolding protein 333091 12320098 SFxv_0341 Shigella flexneri 2002017 putative scaffolding protein YP_005725974.1 332180 D 591020 CDS YP_005725975.1 384541914 12320099 333091..334389 1 NC_017328.1 putative coat protein 334389 12320099 SFxv_0342 Shigella flexneri 2002017 putative coat protein YP_005725975.1 333091 D 591020 CDS YP_005725976.1 384541915 12320100 334660..335160 1 NC_017328.1 putative DNA stabilization protein 335160 12320100 SFxv_0344 Shigella flexneri 2002017 putative DNA stabilization protein YP_005725976.1 334660 D 591020 CDS YP_005725977.1 384541916 12320101 335160..336578 1 NC_017328.1 DNA stabilization protein 336578 12320101 SFxv_0345 Shigella flexneri 2002017 DNA stabilization protein YP_005725977.1 335160 D 591020 CDS YP_005725978.1 384541917 12320102 336578..337426 1 NC_017328.1 putative Chromosome segregation ATPase 337426 12320102 SFxv_0346 Shigella flexneri 2002017 putative Chromosome segregation ATPase YP_005725978.1 336578 D 591020 CDS YP_005725979.1 384541918 12320103 337426..337881 1 NC_017328.1 Gene 10 protein 337881 12320103 SFxv_0347 Shigella flexneri 2002017 Gene 10 protein YP_005725979.1 337426 D 591020 CDS YP_005725980.1 384541919 12320104 337884..338576 1 NC_017328.1 putative DNA transfer protein 338576 12320104 SFxv_0347a Shigella flexneri 2002017 putative DNA transfer protein YP_005725980.1 337884 D 591020 CDS YP_005725981.1 384541920 12320105 338586..340013 1 NC_017328.1 putative phage injection protein 340013 12320105 SFxv_0348 Shigella flexneri 2002017 putative phage injection protein YP_005725981.1 338586 D 591020 CDS YP_005725982.1 384541921 12320106 340013..342010 1 NC_017328.1 Gene 13 protein 342010 12320106 SFxv_0349 Shigella flexneri 2002017 Gene 13 protein YP_005725982.1 340013 D 591020 CDS YP_005725983.1 384541922 12320107 complement(342100..342393) 1 NC_017328.1 putative Chromosome segregation ATPase 342393 12320107 SFxv_0350 Shigella flexneri 2002017 putative Chromosome segregation ATPase YP_005725983.1 342100 R 591020 CDS YP_005725984.1 384541923 12320108 complement(342492..343031) 1 NC_017328.1 HNH endonuclease 343031 12320108 SFxv_0351 Shigella flexneri 2002017 HNH endonuclease YP_005725984.1 342492 R 591020 CDS YP_005725985.1 384541924 12320109 343089..344243 1 NC_017328.1 Tail spike protein 344243 12320109 SFxv_0352 Shigella flexneri 2002017 Tail spike protein YP_005725985.1 343089 D 591020 CDS YP_005725986.1 384541925 12320110 344212..344805 1 NC_017328.1 Tail spike protein 344805 12320110 SFxv_0353 Shigella flexneri 2002017 Tail spike protein YP_005725986.1 344212 D 591020 CDS YP_005725987.1 384541926 12320111 complement(344872..346122) 1 NC_017328.1 Glucosyl transferase 346122 12320111 SFxv_0354 Shigella flexneri 2002017 Glucosyl transferase YP_005725987.1 344872 R 591020 CDS YP_005725988.1 384541927 12320112 complement(346150..347067) 1 NC_017328.1 Bactoprenol glucosyl transferase 347067 12320112 SFxv_0355 Shigella flexneri 2002017 Bactoprenol glucosyl transferase YP_005725988.1 346150 R 591020 CDS YP_005725989.1 384541928 12320113 complement(347064..347426) 1 NC_017328.1 Bactoprenol-linked glucose translocase 347426 12320113 SFxv_0356 Shigella flexneri 2002017 Bactoprenol-linked glucose translocase YP_005725989.1 347064 R 591020 CDS YP_005725990.1 384541929 12320114 complement(347776..348240) 1 NC_017328.1 putative phage integrase 348240 12320114 SFxv_0357 Shigella flexneri 2002017 putative phage integrase YP_005725990.1 347776 R 591020 CDS YP_005725991.1 384541930 12320115 complement(348267..349085) 1 NC_017328.1 IS600 ORF2 349085 12320115 SFxv_0358 Shigella flexneri 2002017 IS600 ORF2 YP_005725991.1 348267 R 591020 CDS YP_005725992.1 384541931 12320116 complement(349449..350117) 1 NC_017328.1 IS629 ORF2 350117 12320116 SFxv_0359 Shigella flexneri 2002017 IS629 ORF2 YP_005725992.1 349449 R 591020 CDS YP_005725993.1 384541932 12320117 complement(350414..350659) 1 NC_017328.1 IS629 orfA 350659 12320117 SFxv_0360 Shigella flexneri 2002017 IS629 orfA YP_005725993.1 350414 R 591020 CDS YP_005725994.1 384541933 12320118 350810..351925 1 NC_017328.1 MASE2 domain/diguanylate cyclase 351925 adrA 12320118 adrA Shigella flexneri 2002017 MASE2 domain/diguanylate cyclase YP_005725994.1 350810 D 591020 CDS YP_005725995.1 384541934 12320119 complement(351942..352751) 1 NC_017328.1 Pyrroline-5-carboxylate reductase 352751 proC 12320119 proC Shigella flexneri 2002017 Pyrroline-5-carboxylate reductase YP_005725995.1 351942 R 591020 CDS YP_005725996.1 384541935 12320120 353512..354036 1 NC_017328.1 shikimate kinase 354036 aroL 12320120 aroL Shigella flexneri 2002017 shikimate kinase YP_005725996.1 353512 D 591020 CDS YP_005725997.1 384541936 12320121 354086..354277 1 NC_017328.1 putative cytoplasmic protein 354277 yaiA 12320121 yaiA Shigella flexneri 2002017 putative cytoplasmic protein YP_005725997.1 354086 D 591020 CDS YP_005725998.1 384541937 12320122 354535..355212 1 NC_017328.1 Protein aroM 355212 aroM 12320122 aroM Shigella flexneri 2002017 Protein aroM YP_005725998.1 354535 D 591020 CDS YP_005725999.1 384541938 12320123 355284..355568 1 NC_017328.1 protein yaiE 355568 yaiE 12320123 yaiE Shigella flexneri 2002017 protein yaiE YP_005725999.1 355284 D 591020 CDS YP_005726000.1 384541939 12320124 355777..356058 1 NC_017328.1 hypothetical protein 356058 12320124 SFxv_0368 Shigella flexneri 2002017 hypothetical protein YP_005726000.1 355777 D 591020 CDS YP_005726001.1 384541940 12320125 356055..356510 1 NC_017328.1 hypothetical protein 356510 12320125 SFxv_0369 Shigella flexneri 2002017 hypothetical protein YP_005726001.1 356055 D 591020 CDS YP_005726002.1 384541941 12320126 complement(356588..357571) 1 NC_017328.1 Nonspecific DNA binding protein 357571 rdgC 12320126 rdgC Shigella flexneri 2002017 Nonspecific DNA binding protein YP_005726002.1 356588 R 591020 CDS YP_005726003.1 384541942 12320127 357486..358532 1 NC_017328.1 Possible NAGC-like transcriptional regulator 358532 mak 12320127 mak Shigella flexneri 2002017 Possible NAGC-like transcriptional regulator YP_005726003.1 357486 D 591020 CDS YP_005726004.1 384541943 12320128 complement(358675..359952) 1 NC_017328.1 Involved in either transport or processing of arabinose polymers 359952 araJ 12320128 araJ Shigella flexneri 2002017 Involved in either transport or processing of arabinose polymers YP_005726004.1 358675 R 591020 CDS YP_005726005.1 384541944 12320129 complement(359982..363125) 1 NC_017328.1 ATP-dependent dsDNA exonuclease 363125 sbcC 12320129 sbcC Shigella flexneri 2002017 ATP-dependent dsDNA exonuclease YP_005726005.1 359982 R 591020 CDS YP_005726006.1 384541945 12320130 complement(363122..364324) 1 NC_017328.1 ATP-dependent dsDNA exonuclease 364324 sbcD 12320130 sbcD Shigella flexneri 2002017 ATP-dependent dsDNA exonuclease YP_005726006.1 363122 R 591020 CDS YP_005726007.1 384541946 12320131 364310..364441 1 NC_017328.1 hypothetical protein 364441 12320131 SFxv_0374 Shigella flexneri 2002017 hypothetical protein YP_005726007.1 364310 D 591020 CDS YP_005726008.1 384541947 12320132 364514..365203 1 NC_017328.1 Phosphate regulon transcriptional regulatory protein phoB 365203 phoB 12320132 phoB Shigella flexneri 2002017 Phosphate regulon transcriptional regulatory protein phoB YP_005726008.1 364514 D 591020 CDS YP_005726009.1 384541948 12320133 365261..366556 1 NC_017328.1 Phosphate regulon sensor protein PhoR 366556 phoR 12320133 phoR Shigella flexneri 2002017 Phosphate regulon sensor protein PhoR YP_005726009.1 365261 D 591020 CDS YP_005726010.1 384541949 12320134 366963..368282 1 NC_017328.1 Branched-chain amino-acid transport system II carrier protein 368282 brnQ 12320134 brnQ Shigella flexneri 2002017 Branched-chain amino-acid transport system II carrier protein YP_005726010.1 366963 D 591020 CDS YP_005726011.1 384541950 12320135 368358..369731 1 NC_017328.1 Proline permease transport protein 369731 proY 12320135 proY Shigella flexneri 2002017 Proline permease transport protein YP_005726011.1 368358 D 591020 CDS YP_005726012.1 384541951 12320136 369887..371704 1 NC_017328.1 maltodextrin glucosidase 371704 malZ 12320136 malZ Shigella flexneri 2002017 maltodextrin glucosidase YP_005726012.1 369887 D 591020 CDS YP_005726013.1 384541952 12320137 complement(371709..372140) 1 NC_017328.1 Acyl carrier protein phosphodiesterase 372140 acpH 12320137 acpH Shigella flexneri 2002017 Acyl carrier protein phosphodiesterase YP_005726013.1 371709 R 591020 CDS YP_005726014.1 384541953 12320138 372375..373445 1 NC_017328.1 S-adenosylmethionine--tRNA ribosyltransferase-isomerase 373445 queA 12320138 queA Shigella flexneri 2002017 S-adenosylmethionine--tRNA ribosyltransferase-isomerase YP_005726014.1 372375 D 591020 CDS YP_005726015.1 384541954 12320139 373500..374627 1 NC_017328.1 queuine tRNA-ribosyltransferase 374627 tgt 12320139 tgt Shigella flexneri 2002017 queuine tRNA-ribosyltransferase YP_005726015.1 373500 D 591020 CDS YP_005726016.1 384541955 12320140 374650..374982 1 NC_017328.1 membrane protein yajC 374982 yajC 12320140 yajC Shigella flexneri 2002017 membrane protein yajC YP_005726016.1 374650 D 591020 CDS YP_005726017.1 384541956 12320141 375010..376857 1 NC_017328.1 Protein-export membrane protein secD 376857 secD 12320141 secD Shigella flexneri 2002017 Protein-export membrane protein secD YP_005726017.1 375010 D 591020 CDS YP_005726018.1 384541957 12320142 376868..377839 1 NC_017328.1 protein-export membrane protein SecF 377839 secF 12320142 secF Shigella flexneri 2002017 protein-export membrane protein SecF YP_005726018.1 376868 D 591020 CDS YP_005726019.1 384541958 12320143 377968..378315 1 NC_017328.1 putative Restriction endonuclease 378315 yajD 12320143 yajD Shigella flexneri 2002017 putative Restriction endonuclease YP_005726019.1 377968 D 591020 CDS YP_005726020.1 384541959 12320144 complement(378492..379376) 1 NC_017328.1 Nucleoside-specific channel-forming protein tsx precursor 379376 tsx 12320144 tsx Shigella flexneri 2002017 Nucleoside-specific channel-forming protein tsx precursor YP_005726020.1 378492 R 591020 CDS YP_005726021.1 384541960 12320145 complement(379674..380273) 1 NC_017328.1 lipoprotein 380273 12320145 SFxv_0389 Shigella flexneri 2002017 lipoprotein YP_005726021.1 379674 R 591020 CDS YP_005726022.1 384541961 12320146 380364..380813 1 NC_017328.1 NrdR family transcriptional regulator 380813 nrdR 12320146 nrdR Shigella flexneri 2002017 NrdR family transcriptional regulator YP_005726022.1 380364 D 591020 CDS YP_005726023.1 384541962 12320147 380817..381920 1 NC_017328.1 putative Pyrimidine reductase, riboflavin biosynthesis 381920 ribD 12320147 ribD Shigella flexneri 2002017 putative Pyrimidine reductase, riboflavin biosynthesis YP_005726023.1 380817 D 591020 CDS YP_005726024.1 384541963 12320148 381913..382479 1 NC_017328.1 6,7-dimethyl-8-ribityllumazine synthase 382479 ribE 12320148 ribE Shigella flexneri 2002017 6,7-dimethyl-8-ribityllumazine synthase YP_005726024.1 381913 D 591020 CDS YP_005726025.1 384541964 12320149 382499..382918 1 NC_017328.1 N utilization substance protein B 382918 nusB 12320149 nusB Shigella flexneri 2002017 N utilization substance protein B YP_005726025.1 382499 D 591020 CDS YP_005726026.1 384541965 12320150 382996..383973 1 NC_017328.1 Thiamin-monophosphate kinase 383973 thiL 12320150 thiL Shigella flexneri 2002017 Thiamin-monophosphate kinase YP_005726026.1 382996 D 591020 CDS YP_005726027.1 384541966 12320151 383951..384469 1 NC_017328.1 Phosphatidylglycerophosphatase 384469 pgpA 12320151 pgpA Shigella flexneri 2002017 Phosphatidylglycerophosphatase YP_005726027.1 383951 D 591020 CDS YP_005726028.1 384541967 12320152 complement(384580..385497) 1 NC_017328.1 putative NAD(P)H-dependent xylose reductase 385497 yajO 12320152 yajO Shigella flexneri 2002017 putative NAD(P)H-dependent xylose reductase YP_005726028.1 384580 R 591020 CDS YP_005726029.1 384541968 12320153 complement(385552..387414) 1 NC_017328.1 1-deoxy-D-xylulose-5-phosphate synthase 387414 dxs 12320153 dxs Shigella flexneri 2002017 1-deoxy-D-xylulose-5-phosphate synthase YP_005726029.1 385552 R 591020 CDS YP_005726030.1 384541969 12320154 complement(387439..388338) 1 NC_017328.1 geranyltranstransferase 388338 ispA 12320154 ispA Shigella flexneri 2002017 geranyltranstransferase YP_005726030.1 387439 R 591020 CDS YP_005726031.1 384541970 12320155 complement(388338..388580) 1 NC_017328.1 exodeoxyribonuclease 7 small subunit 388580 xseB 12320155 xseB Shigella flexneri 2002017 exodeoxyribonuclease 7 small subunit YP_005726031.1 388338 R 591020 CDS YP_005726032.1 384541971 12320156 388786..390234 1 NC_017328.1 Thiamine biosynthesis protein thiI 390234 thiI 12320156 thiI Shigella flexneri 2002017 Thiamine biosynthesis protein thiI YP_005726032.1 388786 D 591020 CDS YP_005726033.1 384541972 12320157 complement(390288..390884) 1 NC_017328.1 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis (ThiJ) protein 390884 yajL 12320157 yajL Shigella flexneri 2002017 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis (ThiJ) protein YP_005726033.1 390288 R 591020 CDS YP_005726034.1 384541973 12320158 complement(390841..391752) 1 NC_017328.1 2-dehydropantoate 2-reductase 391752 panE 12320158 panE Shigella flexneri 2002017 2-dehydropantoate 2-reductase YP_005726034.1 390841 R 591020 CDS YP_005726035.1 384541974 12320159 391920..392411 1 NC_017328.1 hypothetical protein 392411 12320159 SFxv_0404 Shigella flexneri 2002017 hypothetical protein YP_005726035.1 391920 D 591020 CDS YP_005726036.1 384541975 12320160 complement(392471..394201) 1 NC_017328.1 hypothetical protein 394201 12320160 SFxv_0405 Shigella flexneri 2002017 hypothetical protein YP_005726036.1 392471 R 591020 CDS YP_005726037.1 384541976 12320161 complement(394254..396677) 1 NC_017328.1 hypothetical protein 396677 12320161 SFxv_0406 Shigella flexneri 2002017 hypothetical protein YP_005726037.1 394254 R 591020 CDS YP_005726038.1 384541977 12320162 396752..397255 1 NC_017328.1 putative IS1 family transposase 397255 12320162 SFxv_0407 Shigella flexneri 2002017 putative IS1 family transposase YP_005726038.1 396752 D 591020 CDS YP_005726039.1 384541978 12320163 complement(397303..397764) 1 NC_017328.1 GNAT family acetyltransferase 397764 12320163 SFxv_0408 Shigella flexneri 2002017 GNAT family acetyltransferase YP_005726039.1 397303 R 591020 CDS YP_005726040.1 384541979 12320164 complement(397836..398195) 1 NC_017328.1 hypothetical protein 398195 12320164 SFxv_0409 Shigella flexneri 2002017 hypothetical protein YP_005726040.1 397836 R 591020 CDS YP_005726041.1 384541980 12320165 complement(398331..399221) 1 NC_017328.1 Cytochrome o ubiquinol oxidase C subunit 399221 cyoE 12320165 cyoE Shigella flexneri 2002017 Cytochrome o ubiquinol oxidase C subunit YP_005726041.1 398331 R 591020 CDS YP_005726042.1 384541981 12320166 complement(399233..399562) 1 NC_017328.1 Cytochrome O ubiquinol oxidase protein CyoD 399562 cyoD 12320166 cyoD Shigella flexneri 2002017 Cytochrome O ubiquinol oxidase protein CyoD YP_005726042.1 399233 R 591020 CDS YP_005726043.1 384541982 12320167 complement(399562..400176) 1 NC_017328.1 Cytochrome o ubiquinol oxidase subunit 3 400176 cyoC 12320167 cyoC Shigella flexneri 2002017 Cytochrome o ubiquinol oxidase subunit 3 YP_005726043.1 399562 R 591020 CDS YP_005726044.1 384541983 12320169 complement(402179..402646) 1 NC_017328.1 Ubiquinol oxidase subunit 2 402646 cyoA 12320169 cyoA Shigella flexneri 2002017 Ubiquinol oxidase subunit 2 YP_005726044.1 402179 R 591020 CDS YP_005726045.1 384541984 12320170 complement(402709..403515) 1 NC_017328.1 ISSfl3 orfC,D 403515 12320170 SFxv_0416 Shigella flexneri 2002017 ISSfl3 orfC,D YP_005726045.1 402709 R 591020 CDS YP_005726046.1 384541985 12320171 complement(403491..403625) 1 NC_017328.1 ISSfl4 ORF3 403625 12320171 SFxv_0417 Shigella flexneri 2002017 ISSfl4 ORF3 YP_005726046.1 403491 R 591020 CDS YP_005726047.1 384541986 12320172 complement(403645..403992) 1 NC_017328.1 ISSfl4 ORF2 403992 12320172 SFxv_0418 Shigella flexneri 2002017 ISSfl4 ORF2 YP_005726047.1 403645 R 591020 CDS YP_005726048.1 384541987 12320173 complement(403989..404663) 1 NC_017328.1 ISSfl4 ORF1 404663 12320173 SFxv_0419 Shigella flexneri 2002017 ISSfl4 ORF1 YP_005726048.1 403989 R 591020 CDS YP_005726049.1 384541988 12320174 complement(405033..406508) 1 NC_017328.1 Beta-lactamase induction signal transducer AmpG 406508 ampG 12320174 ampG Shigella flexneri 2002017 Beta-lactamase induction signal transducer AmpG YP_005726049.1 405033 R 591020 CDS YP_005726050.1 384541989 12320175 complement(406552..407232) 1 NC_017328.1 putative polymerase/proteinase 407232 yajG 12320175 yajG Shigella flexneri 2002017 putative polymerase/proteinase YP_005726050.1 406552 R 591020 CDS YP_005726051.1 384541990 12320176 407435..407752 1 NC_017328.1 Protein bolA 407752 bolA 12320176 bolA Shigella flexneri 2002017 Protein bolA YP_005726051.1 407435 D 591020 CDS YP_005726052.1 384541991 12320177 407686..407949 1 NC_017328.1 hypothetical protein 407949 12320177 SFxv_0423 Shigella flexneri 2002017 hypothetical protein YP_005726052.1 407686 D 591020 CDS YP_005726053.1 384541992 12320178 408096..409394 1 NC_017328.1 trigger factor Tig 409394 tig 12320178 tig Shigella flexneri 2002017 trigger factor Tig YP_005726053.1 408096 D 591020 CDS YP_005726054.1 384541993 12320179 409641..410264 1 NC_017328.1 ATP-dependent Clp protease proteolytic subunit 410264 clpP 12320179 clpP Shigella flexneri 2002017 ATP-dependent Clp protease proteolytic subunit YP_005726054.1 409641 D 591020 CDS YP_005726055.1 384541994 12320180 410390..411664 1 NC_017328.1 ATP-dependent Clp protease ATP-binding subunit clpX 411664 clpX 12320180 clpX Shigella flexneri 2002017 ATP-dependent Clp protease ATP-binding subunit clpX YP_005726055.1 410390 D 591020 CDS YP_005726056.1 384541995 12320181 411852..414206 1 NC_017328.1 ATP-dependent protease La 414206 lon 12320181 lon Shigella flexneri 2002017 ATP-dependent protease La YP_005726056.1 411852 D 591020 CDS YP_005726057.1 384541996 12320182 414415..414687 1 NC_017328.1 DNA-binding protein HU-beta 414687 hupB 12320182 hupB Shigella flexneri 2002017 DNA-binding protein HU-beta YP_005726057.1 414415 D 591020 CDS YP_005726058.1 384541997 12320183 414879..416750 1 NC_017328.1 putative protease maturation protein 416750 ppiD 12320183 ppiD Shigella flexneri 2002017 putative protease maturation protein YP_005726058.1 414879 D 591020 CDS YP_005726059.1 384541998 12320184 416901..417272 1 NC_017328.1 Competence protein ComEA 417272 ybaV 12320184 ybaV Shigella flexneri 2002017 Competence protein ComEA YP_005726059.1 416901 D 591020 CDS YP_005726060.1 384541999 12320185 417366..417764 1 NC_017328.1 putative acyl-CoA thioester hydrolase ybaW 417764 ybaW 12320185 ybaW Shigella flexneri 2002017 putative acyl-CoA thioester hydrolase ybaW YP_005726060.1 417366 D 591020 CDS YP_005726061.1 384542000 12320186 complement(417816..418511) 1 NC_017328.1 Queuosine biosynthesis protein queC 418511 queC 12320186 queC Shigella flexneri 2002017 Queuosine biosynthesis protein queC YP_005726061.1 417816 R 591020 CDS YP_005726062.1 384542001 12320187 complement(418576..420147) 1 NC_017328.1 putative transport protein 420147 ybaE 12320187 ybaE Shigella flexneri 2002017 putative transport protein YP_005726062.1 418576 R 591020 CDS YP_005726063.1 384542002 12320188 420356..421186 1 NC_017328.1 Cof protein 421186 cof 12320188 cof Shigella flexneri 2002017 Cof protein YP_005726063.1 420356 D 591020 CDS YP_005726064.1 384542003 12320189 421232..421798 1 NC_017328.1 putative LRP-like transcriptional regulator 421798 ybaO 12320189 ybaO Shigella flexneri 2002017 putative LRP-like transcriptional regulator YP_005726064.1 421232 D 591020 CDS YP_005726065.1 384542004 12320190 421828..423600 1 NC_017328.1 ATP-binding component of a transport system 423600 mdlA 12320190 mdlA Shigella flexneri 2002017 ATP-binding component of a transport system YP_005726065.1 421828 D 591020 CDS YP_005726066.1 384542005 12320191 423593..425374 1 NC_017328.1 ATPase 425374 mdlB 12320191 mdlB Shigella flexneri 2002017 ATPase YP_005726066.1 423593 D 591020 CDS YP_005726067.1 384542006 12320192 425417..425893 1 NC_017328.1 Nitrogen regulatory protein P-II 2 425893 glnK 12320192 glnK Shigella flexneri 2002017 Nitrogen regulatory protein P-II 2 YP_005726067.1 425417 D 591020 CDS YP_005726068.1 384542007 12320193 425923..427209 1 NC_017328.1 putative ammonium transporter 427209 amtB 12320193 amtB Shigella flexneri 2002017 putative ammonium transporter YP_005726068.1 425923 D 591020 CDS YP_005726069.1 384542008 12320194 complement(427258..427758) 1 NC_017328.1 Acyl-CoA thioesterase II 427758 tesB 12320194 tesB Shigella flexneri 2002017 Acyl-CoA thioesterase II YP_005726069.1 427258 R 591020 CDS YP_005726070.1 384542009 12320195 428336..428908 1 NC_017328.1 Glycoprotein/polysaccharide metabolism precursor 428908 ybaY 12320195 ybaY Shigella flexneri 2002017 Glycoprotein/polysaccharide metabolism precursor YP_005726070.1 428336 D 591020 CDS YP_005726071.1 384542010 12320196 429001..430347 1 NC_017328.1 IS4 ORF 430347 12320196 SFxv_0443 Shigella flexneri 2002017 IS4 ORF YP_005726071.1 429001 D 591020 CDS YP_005726072.1 384542011 12320197 complement(430377..430766) 1 NC_017328.1 putative methyltransferase 430766 ybaZ 12320197 ybaZ Shigella flexneri 2002017 putative methyltransferase YP_005726072.1 430377 R 591020 CDS YP_005726073.1 384542012 12320198 431067..431420 1 NC_017328.1 conserved Ybaa Protein 431420 ybaA 12320198 ybaA Shigella flexneri 2002017 conserved Ybaa Protein YP_005726073.1 431067 D 591020 CDS YP_005726074.1 384542013 12320199 complement(431462..433018) 1 NC_017328.1 Cyclic diguanylate phosphodiesterase (EAL) domain protein 433018 ylaB 12320199 ylaB Shigella flexneri 2002017 Cyclic diguanylate phosphodiesterase (EAL) domain protein YP_005726074.1 431462 R 591020 CDS YP_005726075.1 384542014 12320200 complement(433176..433685) 1 NC_017328.1 Inner membrane protein 433685 ylaC 12320200 ylaC Shigella flexneri 2002017 Inner membrane protein YP_005726075.1 433176 R 591020 CDS YP_005726076.1 384542015 12320202 complement(434485..434703) 1 NC_017328.1 Hemolysin expression modulating protein 434703 hha 12320202 hha Shigella flexneri 2002017 Hemolysin expression modulating protein YP_005726076.1 434485 R 591020 CDS YP_005726077.1 384542016 12320203 complement(434729..435103) 1 NC_017328.1 hypothetical protein 435103 12320203 SFxv_0451 Shigella flexneri 2002017 hypothetical protein YP_005726077.1 434729 R 591020 CDS YP_005726078.1 384542017 12320204 complement(435649..438798) 1 NC_017328.1 Acriflavine resistance protein 438798 acrB 12320204 acrB Shigella flexneri 2002017 Acriflavine resistance protein YP_005726078.1 435649 R 591020 CDS YP_005726079.1 384542018 12320205 complement(438821..440050) 1 NC_017328.1 Acriflavin resistance protein AcrA 440050 acrA 12320205 acrA Shigella flexneri 2002017 Acriflavin resistance protein AcrA YP_005726079.1 438821 R 591020 CDS YP_005726080.1 384542019 12320206 440156..440803 1 NC_017328.1 HTH-type transcriptional regulator acrR 440803 acrR 12320206 acrR Shigella flexneri 2002017 HTH-type transcriptional regulator acrR YP_005726080.1 440156 D 591020 CDS YP_005726081.1 384542020 12320207 440931..444293 1 NC_017328.1 putative alpha helix protein 444293 kefA 12320207 kefA Shigella flexneri 2002017 putative alpha helix protein YP_005726081.1 440931 D 591020 CDS YP_005726082.1 384542021 12320208 complement(444505..444666) 1 NC_017328.1 hypothetical protein 444666 ybaM 12320208 ybaM Shigella flexneri 2002017 hypothetical protein YP_005726082.1 444505 R 591020 CDS YP_005726083.1 384542022 12320209 complement(444680..445207) 1 NC_017328.1 Primosomal replication protein N 445207 priC 12320209 priC Shigella flexneri 2002017 Primosomal replication protein N YP_005726083.1 444680 R 591020 CDS YP_005726084.1 384542023 12320210 445277..445654 1 NC_017328.1 Inner membrane protein ybaN 445654 ybaN 12320210 ybaN Shigella flexneri 2002017 Inner membrane protein ybaN YP_005726084.1 445277 D 591020 CDS YP_005726085.1 384542024 12320211 445807..446358 1 NC_017328.1 Adenine phosphoribosyltransferase 446358 apt 12320211 apt Shigella flexneri 2002017 Adenine phosphoribosyltransferase YP_005726085.1 445807 D 591020 CDS YP_005726086.1 384542025 12320212 446487..448412 1 NC_017328.1 DNA polymerase III subunit tau and gamma 448412 dnaX 12320212 dnaX Shigella flexneri 2002017 DNA polymerase III subunit tau and gamma YP_005726086.1 446487 D 591020 CDS YP_005726087.1 384542026 12320213 448465..448794 1 NC_017328.1 protein ybaB 448794 ybaB 12320213 ybaB Shigella flexneri 2002017 protein ybaB YP_005726087.1 448465 D 591020 CDS YP_005726088.1 384542027 12320214 448794..449399 1 NC_017328.1 Recombination protein recR 449399 recR 12320214 recR Shigella flexneri 2002017 Recombination protein recR YP_005726088.1 448794 D 591020 CDS YP_005726089.1 384542028 12320215 449509..451383 1 NC_017328.1 chaperone protein htpG 451383 htpG 12320215 htpG Shigella flexneri 2002017 chaperone protein htpG YP_005726089.1 449509 D 591020 CDS YP_005726090.1 384542029 12320216 451504..452208 1 NC_017328.1 adenylate kinase 452208 adk 12320216 adk Shigella flexneri 2002017 adenylate kinase YP_005726090.1 451504 D 591020 CDS YP_005726091.1 384542030 12320217 452340..453302 1 NC_017328.1 ferrochelatase 453302 hemH 12320217 hemH Shigella flexneri 2002017 ferrochelatase YP_005726091.1 452340 D 591020 CDS YP_005726092.1 384542031 12320218 complement(453440..454258) 1 NC_017328.1 Acetyl esterase 454258 aes 12320218 aes Shigella flexneri 2002017 Acetyl esterase YP_005726092.1 453440 R 591020 CDS YP_005726093.1 384542032 12320219 454410..455714 1 NC_017328.1 Inosine-guanosine kinase 455714 gsk 12320219 gsk Shigella flexneri 2002017 Inosine-guanosine kinase YP_005726093.1 454410 D 591020 CDS YP_005726094.1 384542033 12320220 complement(455847..457523) 1 NC_017328.1 putative Kef-type K+ transport system NAD-binding protein 457523 ybaL 12320220 ybaL Shigella flexneri 2002017 putative Kef-type K+ transport system NAD-binding protein YP_005726094.1 455847 R 591020 CDS YP_005726095.1 384542034 12320221 complement(457761..458981) 1 NC_017328.1 Fosmidomycin resistance protein 458981 fsr 12320221 fsr Shigella flexneri 2002017 Fosmidomycin resistance protein YP_005726095.1 457761 R 591020 CDS YP_005726096.1 384542035 12320222 459199..460851 1 NC_017328.1 bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic 460851 ushA 12320222 ushA Shigella flexneri 2002017 bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic YP_005726096.1 459199 D 591020 CDS YP_005726097.1 384542036 12320223 complement(460888..461367) 1 NC_017328.1 Protein YbaK / prolyl-tRNA synthetases associated domain protein 461367 ybaK 12320223 ybaK Shigella flexneri 2002017 Protein YbaK / prolyl-tRNA synthetases associated domain protein YP_005726097.1 460888 R 591020 CDS YP_005726098.1 384542037 12320224 complement(461571..462365) 1 NC_017328.1 putative ligase 462365 ybaP 12320224 ybaP Shigella flexneri 2002017 putative ligase YP_005726098.1 461571 R 591020 CDS YP_005726099.1 384542038 12320225 462449..462844 1 NC_017328.1 Addiction module antidote protein, HigA family 462844 ybaQ 12320225 ybaQ Shigella flexneri 2002017 Addiction module antidote protein, HigA family YP_005726099.1 462449 D 591020 CDS YP_005726100.1 384542039 12320226 complement(463059..465563) 1 NC_017328.1 putative ATPase 465563 copA 12320226 copA Shigella flexneri 2002017 putative ATPase YP_005726100.1 463059 R 591020 CDS YP_005726101.1 384542040 12320227 465825..466757 1 NC_017328.1 Glutaminase 1 466757 ybaS 12320227 ybaS Shigella flexneri 2002017 Glutaminase 1 YP_005726101.1 465825 D 591020 CDS YP_005726102.1 384542041 12320228 466760..468052 1 NC_017328.1 putative amino acid/amine transport protein 468052 ybaT 12320228 ybaT Shigella flexneri 2002017 putative amino acid/amine transport protein YP_005726102.1 466760 D 591020 CDS YP_005726103.1 384542042 12320229 468177..468584 1 NC_017328.1 HTH-type transcriptional regulator cueR 468584 cueR 12320229 cueR Shigella flexneri 2002017 HTH-type transcriptional regulator cueR YP_005726103.1 468177 D 591020 CDS YP_005726104.1 384542043 12320230 complement(468585..469043) 1 NC_017328.1 putative membrane protein implicated in regulation of membrane protease activity 469043 ybbJ 12320230 ybbJ Shigella flexneri 2002017 putative membrane protein implicated in regulation of membrane protease activity YP_005726104.1 468585 R 591020 CDS YP_005726105.1 384542044 12320231 complement(469040..469957) 1 NC_017328.1 putative membrane protease subunit, stomatin/prohibitin 469957 qmcA 12320231 qmcA Shigella flexneri 2002017 putative membrane protease subunit, stomatin/prohibitin YP_005726105.1 469040 R 591020 CDS YP_005726106.1 384542045 12320232 470103..470780 1 NC_017328.1 ATPase 470780 ybbL 12320232 ybbL Shigella flexneri 2002017 ATPase YP_005726106.1 470103 D 591020 CDS YP_005726107.1 384542046 12320233 470740..471546 1 NC_017328.1 putative metal resistance protein 471546 ybbM 12320233 ybbM Shigella flexneri 2002017 putative metal resistance protein YP_005726107.1 470740 D 591020 CDS YP_005726108.1 384542047 12320234 complement(471609..472499) 1 NC_017328.1 putative thioredoxin-like protein 472499 ybbN 12320234 ybbN Shigella flexneri 2002017 putative thioredoxin-like protein YP_005726108.1 471609 R 591020 CDS YP_005726109.1 384542048 12320235 complement(472524..473333) 1 NC_017328.1 Oxidoreductase, short chain dehydrogenase/reductase family 473333 ybbO 12320235 ybbO Shigella flexneri 2002017 Oxidoreductase, short chain dehydrogenase/reductase family YP_005726109.1 472524 R 591020 CDS YP_005726110.1 384542049 12320236 complement(473323..473646) 1 NC_017328.1 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase 473646 tesA-1 12320236 tesA-1 Shigella flexneri 2002017 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase YP_005726110.1 473323 R 591020 CDS YP_005726111.1 384542050 12320237 complement(473559..473948) 1 NC_017328.1 Acyl-CoA thioesterase I 473948 tesA-2 12320237 tesA-2 Shigella flexneri 2002017 Acyl-CoA thioesterase I YP_005726111.1 473559 R 591020 CDS YP_005726112.1 384542051 12320238 473916..474602 1 NC_017328.1 putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component 474602 ybbA 12320238 ybbA Shigella flexneri 2002017 putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component YP_005726112.1 473916 D 591020 CDS YP_005726113.1 384542052 12320239 474599..476878 1 NC_017328.1 Efflux ABC transporter, permease protein 476878 ybbP 12320239 ybbP Shigella flexneri 2002017 Efflux ABC transporter, permease protein YP_005726113.1 474599 D 591020 CDS YP_005726114.1 384542053 12320240 complement(477727..478821) 1 NC_017328.1 tRNA 2-selenouridine synthase 478821 ybbB 12320240 ybbB Shigella flexneri 2002017 tRNA 2-selenouridine synthase YP_005726114.1 477727 R 591020 CDS YP_005726115.1 384542054 12320241 complement(478890..479816) 1 NC_017328.1 putative transcriptional regulator LYSR-type 479816 allS 12320241 allS Shigella flexneri 2002017 putative transcriptional regulator LYSR-type YP_005726115.1 478890 R 591020 CDS YP_005726116.1 384542055 12320242 480046..480528 1 NC_017328.1 ureidoglycolate hydrolase 480528 allA 12320242 allA Shigella flexneri 2002017 ureidoglycolate hydrolase YP_005726116.1 480046 D 591020 CDS YP_005726117.1 384542056 12320243 480606..481421 1 NC_017328.1 putative regulator 481421 allR 12320243 allR Shigella flexneri 2002017 putative regulator YP_005726117.1 480606 D 591020 CDS YP_005726118.1 384542057 12320244 481457..483292 1 NC_017328.1 Glyoxylate carboligase 483292 gcl 12320244 gcl Shigella flexneri 2002017 Glyoxylate carboligase YP_005726118.1 481457 D 591020 CDS YP_005726119.1 384542058 12320245 483305..483586 1 NC_017328.1 Glyoxylate-induced protein 483586 hyi 12320245 hyi Shigella flexneri 2002017 Glyoxylate-induced protein YP_005726119.1 483305 D 591020 CDS YP_005726120.1 384542059 12320246 complement(483597..484100) 1 NC_017328.1 putative IS1 family transposase 484100 12320246 SFxv_0494 Shigella flexneri 2002017 putative IS1 family transposase YP_005726120.1 483597 R 591020 CDS YP_005726121.1 384542060 12320247 484214..484657 1 NC_017328.1 putative alpha-mannosidase 484657 12320247 SFxv_0495 Shigella flexneri 2002017 putative alpha-mannosidase YP_005726121.1 484214 D 591020 CDS YP_005726122.1 384542061 12320249 complement(484994..486283) 1 NC_017328.1 putative hydantoin utilization protein 486283 12320249 SFxv_0497 Shigella flexneri 2002017 putative hydantoin utilization protein YP_005726122.1 484994 R 591020 CDS YP_005726123.1 384542062 12320250 486289..486876 1 NC_017328.1 putative carboxylase 486876 ylbF 12320250 ylbF Shigella flexneri 2002017 putative carboxylase YP_005726123.1 486289 D 591020 CDS YP_005726124.1 384542063 12320251 486873..487766 1 NC_017328.1 putative carbamate kinase 487766 ybcF 12320251 ybcF Shigella flexneri 2002017 putative carbamate kinase YP_005726124.1 486873 D 591020 CDS YP_005726125.1 384542064 12320252 complement(487903..488970) 1 NC_017328.1 Phosphoribosylaminoimidazole carboxylase; AIR carboxylase, CO(2)- fixing subunit 488970 purK 12320252 purK Shigella flexneri 2002017 Phosphoribosylaminoimidazole carboxylase; AIR carboxylase, CO(2)- fixing subunit YP_005726125.1 487903 R 591020 CDS YP_005726126.1 384542065 12320253 complement(488967..489476) 1 NC_017328.1 Phosphoribosylaminoimidazole carboxylase; AIR carboxylase, catalytic subunit 489476 purE 12320253 purE Shigella flexneri 2002017 Phosphoribosylaminoimidazole carboxylase; AIR carboxylase, catalytic subunit YP_005726126.1 488967 R 591020 CDS YP_005726127.1 384542066 12320254 complement(489594..490142) 1 NC_017328.1 UDP-2,3-diacylglucosamine hydrolase 490142 lpxH 12320254 lpxH Shigella flexneri 2002017 UDP-2,3-diacylglucosamine hydrolase YP_005726127.1 489594 R 591020 CDS YP_005726128.1 384542067 12320255 complement(490319..490813) 1 NC_017328.1 peptidyl-prolyl cis-trans isomerase 490813 ppiB 12320255 ppiB Shigella flexneri 2002017 peptidyl-prolyl cis-trans isomerase YP_005726128.1 490319 R 591020 CDS YP_005726129.1 384542068 12320256 490987..492372 1 NC_017328.1 cysteinyl-tRNA synthetase 492372 cysS 12320256 cysS Shigella flexneri 2002017 cysteinyl-tRNA synthetase YP_005726129.1 490987 D 591020 CDS YP_005726130.1 384542069 12320257 complement(492408..492917) 1 NC_017328.1 putative membrane-bound metal-dependent hydrolase 492917 ybcI 12320257 ybcI Shigella flexneri 2002017 putative membrane-bound metal-dependent hydrolase YP_005726130.1 492408 R 591020 CDS YP_005726131.1 384542070 12320259 complement(493239..494105) 1 NC_017328.1 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 494105 folD 12320259 folD Shigella flexneri 2002017 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase YP_005726131.1 493239 R 591020 CDS YP_005726132.1 384542071 12320260 494553..495128 1 NC_017328.1 putative fimbrial-like protein 495128 sfmA 12320260 sfmA Shigella flexneri 2002017 putative fimbrial-like protein YP_005726132.1 494553 D 591020 CDS YP_005726133.1 384542072 12320261 495348..496040 1 NC_017328.1 putative chaperone 496040 sfmC 12320261 sfmC Shigella flexneri 2002017 putative chaperone YP_005726133.1 495348 D 591020 CDS YP_005726134.1 384542073 12320262 496071..496589 1 NC_017328.1 Fimbrial biogenesis outer membrane usher protein precursor 496589 sfmD 12320262 sfmD Shigella flexneri 2002017 Fimbrial biogenesis outer membrane usher protein precursor YP_005726134.1 496071 D 591020 CDS YP_005726135.1 384542074 12320263 complement(496583..497086) 1 NC_017328.1 putative IS1 family transposase 497086 12320263 SFxv_0511 Shigella flexneri 2002017 putative IS1 family transposase YP_005726135.1 496583 R 591020 CDS YP_005726136.1 384542075 12320264 497200..497391 1 NC_017328.1 IS600 ORF2 497391 12320264 SFxv_0512 Shigella flexneri 2002017 IS600 ORF2 YP_005726136.1 497200 D 591020 CDS YP_005726137.1 384542076 12320265 complement(497314..497607) 1 NC_017328.1 LuxR family two component transcriptional regulator 497607 12320265 SFxv_0513 Shigella flexneri 2002017 LuxR family two component transcriptional regulator YP_005726137.1 497314 R 591020 CDS YP_005726138.1 384542077 12320267 complement(497909..498670) 1 NC_017328.1 Envelope protein 498670 envY 12320267 envY Shigella flexneri 2002017 Envelope protein YP_005726138.1 497909 R 591020 CDS YP_005726139.1 384542078 12320268 complement(498853..499743) 1 NC_017328.1 hypothetical protein 499743 12320268 SFxv_0515 Shigella flexneri 2002017 hypothetical protein YP_005726139.1 498853 R 591020 CDS YP_005726140.1 384542079 12320270 complement(502699..504936) 1 NC_017328.1 Bacteriophage N4 receptor, outer membrane protein 504936 nfrB 12320270 nfrB Shigella flexneri 2002017 Bacteriophage N4 receptor, outer membrane protein YP_005726140.1 502699 R 591020 CDS YP_005726141.1 384542080 12320271 complement(505086..506528) 1 NC_017328.1 putative Sensor protein 506528 cusS 12320271 cusS Shigella flexneri 2002017 putative Sensor protein YP_005726141.1 505086 R 591020 CDS YP_005726142.1 384542081 12320272 complement(506518..507201) 1 NC_017328.1 putative 2-component transcriptional regulator 507201 cusR 12320272 cusR Shigella flexneri 2002017 putative 2-component transcriptional regulator YP_005726142.1 506518 R 591020 CDS YP_005726143.1 384542082 12320273 507358..508740 1 NC_017328.1 putative resistance protein 508740 cusC 12320273 cusC Shigella flexneri 2002017 putative resistance protein YP_005726143.1 507358 D 591020 CDS YP_005726144.1 384542083 12320274 508764..509096 1 NC_017328.1 Cation efflux system protein cusF precursor 509096 cusF 12320274 cusF Shigella flexneri 2002017 Cation efflux system protein cusF precursor YP_005726144.1 508764 D 591020 CDS YP_005726145.1 384542084 12320275 509112..509885 1 NC_017328.1 putative membrane-fusion protein 509885 cusB-1 12320275 cusB-1 Shigella flexneri 2002017 putative membrane-fusion protein YP_005726145.1 509112 D 591020 CDS YP_005726146.1 384542085 12320276 510037..510360 1 NC_017328.1 IntA protein 510360 12320276 SFxv_0524 Shigella flexneri 2002017 IntA protein YP_005726146.1 510037 D 591020 CDS YP_005726147.1 384542086 12320277 complement(510400..511068) 1 NC_017328.1 IS629 orfB 511068 12320277 SFxv_0525 Shigella flexneri 2002017 IS629 orfB YP_005726147.1 510400 R 591020 CDS YP_005726148.1 384542087 12320278 complement(511283..511609) 1 NC_017328.1 IS629 orfA 511609 12320278 SFxv_0527 Shigella flexneri 2002017 IS629 orfA YP_005726148.1 511283 R 591020 CDS YP_005726149.1 384542088 12320280 complement(512750..513502) 1 NC_017328.1 IS2 orfB 513502 12320280 SFxv_0530 Shigella flexneri 2002017 IS2 orfB YP_005726149.1 512750 R 591020 CDS YP_005726150.1 384542089 12320282 complement(513613..513891) 1 NC_017328.1 IS2 ORF1 513891 12320282 SFxv_0532 Shigella flexneri 2002017 IS2 ORF1 YP_005726150.1 513613 R 591020 CDS YP_005726152.1 384542090 12320283 514281..514784 1 NC_017328.1 putative membrane-fusion protein 514784 cusB-2 12320283 cusB-2 Shigella flexneri 2002017 putative membrane-fusion protein YP_005726152.1 514281 D 591020 CDS YP_005726153.1 384542091 12320284 514796..517939 1 NC_017328.1 putative inner membrane component for iron transport 517939 cusA 12320284 cusA Shigella flexneri 2002017 putative inner membrane component for iron transport YP_005726153.1 514796 D 591020 CDS YP_005726154.1 384542092 12320285 518040..519416 1 NC_017328.1 Amino acid permease-associated region 519416 pheP 12320285 pheP Shigella flexneri 2002017 Amino acid permease-associated region YP_005726154.1 518040 D 591020 CDS YP_005726155.1 384542093 12320286 complement(519484..520731) 1 NC_017328.1 putative transporter containing mechanosensitive ion channel domain 520731 ybdG 12320286 ybdG Shigella flexneri 2002017 putative transporter containing mechanosensitive ion channel domain YP_005726155.1 519484 R 591020 CDS YP_005726156.1 384542094 12320287 complement(520839..521492) 1 NC_017328.1 Oxygen-insensitive NAD(P)H nitroreductase 521492 nfsB 12320287 nfsB Shigella flexneri 2002017 Oxygen-insensitive NAD(P)H nitroreductase YP_005726156.1 520839 R 591020 CDS YP_005726157.1 384542095 12320288 complement(521586..521954) 1 NC_017328.1 hypothetical protein 521954 12320288 SFxv_0538 Shigella flexneri 2002017 hypothetical protein YP_005726157.1 521586 R 591020 CDS YP_005726158.1 384542096 12320289 complement(522019..522267) 1 NC_017328.1 hypothetical protein 522267 12320289 SFxv_0539 Shigella flexneri 2002017 hypothetical protein YP_005726158.1 522019 R 591020 CDS YP_005726159.1 384542097 12320290 complement(522333..523451) 1 NC_017328.1 putative Carboxylate-amine ligase 523451 12320290 SFxv_0540 Shigella flexneri 2002017 putative Carboxylate-amine ligase YP_005726159.1 522333 R 591020 CDS YP_005726160.1 384542098 12320291 523883..524404 1 NC_017328.1 IS150 ORF1 524404 12320291 SFxv_0542 Shigella flexneri 2002017 IS150 ORF1 YP_005726160.1 523883 D 591020 CDS YP_005726161.1 384542099 12320293 525349..525501 1 NC_017328.1 hypothetical protein 525501 12320293 SFxv_0544 Shigella flexneri 2002017 hypothetical protein YP_005726161.1 525349 D 591020 CDS YP_005726162.1 384542100 12320294 525753..526004 1 NC_017328.1 hypothetical protein 526004 12320294 SFxv_0545 Shigella flexneri 2002017 hypothetical protein YP_005726162.1 525753 D 591020 CDS YP_005726163.1 384542101 12320295 complement(526126..526896) 1 NC_017328.1 4'-phosphopantetheinyl transferase entD 526896 entD 12320295 entD Shigella flexneri 2002017 4'-phosphopantetheinyl transferase entD YP_005726163.1 526126 R 591020 CDS YP_005726164.1 384542102 12320296 complement(526921..529161) 1 NC_017328.1 Ferrienterobactin receptor 529161 fepA 12320296 fepA Shigella flexneri 2002017 Ferrienterobactin receptor YP_005726164.1 526921 R 591020 CDS YP_005726165.1 384542103 12320297 529154..529285 1 NC_017328.1 hypothetical protein 529285 12320297 SFxv_0548 Shigella flexneri 2002017 hypothetical protein YP_005726165.1 529154 D 591020 CDS YP_005726166.1 384542104 12320298 529404..530606 1 NC_017328.1 Enterochelin esterase 530606 fes 12320298 fes Shigella flexneri 2002017 Enterochelin esterase YP_005726166.1 529404 D 591020 CDS YP_005726167.1 384542105 12320299 530609..530827 1 NC_017328.1 putative cytoplasmic protein 530827 ybdZ 12320299 ybdZ Shigella flexneri 2002017 putative cytoplasmic protein YP_005726167.1 530609 D 591020 CDS YP_005726168.1 384542106 12320300 530824..534669 1 NC_017328.1 Enterobactin synthetase component F 534669 entF 12320300 entF Shigella flexneri 2002017 Enterobactin synthetase component F YP_005726168.1 530824 D 591020 CDS YP_005726169.1 384542107 12320301 534947..535450 1 NC_017328.1 putative IS1 family transposase 535450 12320301 SFxv_0553 Shigella flexneri 2002017 putative IS1 family transposase YP_005726169.1 534947 D 591020 CDS YP_005726170.1 384542108 12320303 complement(536791..537606) 1 NC_017328.1 Ferric enterobactin transport ATP-binding protein 537606 fepC 12320303 fepC Shigella flexneri 2002017 Ferric enterobactin transport ATP-binding protein YP_005726170.1 536791 R 591020 CDS YP_005726171.1 384542109 12320304 complement(537603..538595) 1 NC_017328.1 Ferric enterobactin transport protein 538595 fepG 12320304 fepG Shigella flexneri 2002017 Ferric enterobactin transport protein YP_005726171.1 537603 R 591020 CDS YP_005726172.1 384542110 12320305 complement(538592..539608) 1 NC_017328.1 Ferric enterobactin (Enterochelin) transport protein 539608 fepD 12320305 fepD Shigella flexneri 2002017 Ferric enterobactin (Enterochelin) transport protein YP_005726172.1 538592 R 591020 CDS YP_005726173.1 384542111 12320306 539707..540939 1 NC_017328.1 Enterobactin exporter entS 540939 entS 12320306 entS Shigella flexneri 2002017 Enterobactin exporter entS YP_005726173.1 539707 D 591020 CDS YP_005726174.1 384542112 12320307 complement(540943..541899) 1 NC_017328.1 Ferric enterobactin (Enterochelin) binding protein 541899 fepB 12320307 fepB Shigella flexneri 2002017 Ferric enterobactin (Enterochelin) binding protein YP_005726174.1 540943 R 591020 CDS YP_005726175.1 384542113 12320309 543376..544986 1 NC_017328.1 2,3-dihydroxybenzoate-AMP ligase 544986 entE 12320309 entE Shigella flexneri 2002017 2,3-dihydroxybenzoate-AMP ligase YP_005726175.1 543376 D 591020 CDS YP_005726176.1 384542114 12320310 545000..545857 1 NC_017328.1 isochorismatase 545857 entB 12320310 entB Shigella flexneri 2002017 isochorismatase YP_005726176.1 545000 D 591020 CDS YP_005726177.1 384542115 12320311 545857..546603 1 NC_017328.1 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase 546603 entA 12320311 entA Shigella flexneri 2002017 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase YP_005726177.1 545857 D 591020 CDS YP_005726178.1 384542116 12320312 546606..547019 1 NC_017328.1 Esterase ybdB 547019 ybdB 12320312 ybdB Shigella flexneri 2002017 Esterase ybdB YP_005726178.1 546606 D 591020 CDS YP_005726179.1 384542117 12320313 547200..549305 1 NC_017328.1 Carbon starvation protein 549305 cstA 12320313 cstA Shigella flexneri 2002017 Carbon starvation protein YP_005726179.1 547200 D 591020 CDS YP_005726180.1 384542118 12320314 549487..549684 1 NC_017328.1 hypothetical protein 549684 12320314 SFxv_0566 Shigella flexneri 2002017 hypothetical protein YP_005726180.1 549487 D 591020 CDS YP_005726181.1 384542119 12320315 complement(549694..550782) 1 NC_017328.1 putative oxidoreductase 550782 ybdH 12320315 ybdH Shigella flexneri 2002017 putative oxidoreductase YP_005726181.1 549694 R 591020 CDS YP_005726182.1 384542120 12320316 550891..552051 1 NC_017328.1 putative aspartate/tyrosine/aromatic aminotransferase 552051 ybdL 12320316 ybdL Shigella flexneri 2002017 putative aspartate/tyrosine/aromatic aminotransferase YP_005726182.1 550891 D 591020 CDS YP_005726183.1 384542121 12320319 554983..555267 1 NC_017328.1 Transposase IS3/IS911 family protein 555267 12320319 SFxv_0573 Shigella flexneri 2002017 Transposase IS3/IS911 family protein YP_005726183.1 554983 D 591020 CDS YP_005726184.1 384542122 12320320 555324..556136 1 NC_017328.1 ISEhe3, transposase orfB 556136 12320320 SFxv_0574 Shigella flexneri 2002017 ISEhe3, transposase orfB YP_005726184.1 555324 D 591020 CDS YP_005726185.1 384542123 12320321 complement(556505..557407) 1 NC_017328.1 lysR-family transcriptional regulator 557407 ybdO 12320321 ybdO Shigella flexneri 2002017 lysR-family transcriptional regulator YP_005726185.1 556505 R 591020 CDS YP_005726186.1 384542124 12320322 complement(557617..558423) 1 NC_017328.1 Thiol:disulfide interchange protein 558423 dsbG 12320322 dsbG Shigella flexneri 2002017 Thiol:disulfide interchange protein YP_005726186.1 557617 R 591020 CDS YP_005726187.1 384542125 12320323 558735..559298 1 NC_017328.1 Alkyl hydroperoxide reductase subunit C 559298 ahpC 12320323 ahpC Shigella flexneri 2002017 Alkyl hydroperoxide reductase subunit C YP_005726187.1 558735 D 591020 CDS YP_005726188.1 384542126 12316519 559513..561108 1 NC_017328.1 Alkyl hydroperoxide reductase, F52a subunit 561108 ahpF 12316519 ahpF Shigella flexneri 2002017 Alkyl hydroperoxide reductase, F52a subunit YP_005726188.1 559513 D 591020 CDS YP_005726189.1 384542127 12316520 complement(561229..561657) 1 NC_017328.1 Universal stress protein G 561657 uspG 12316520 uspG Shigella flexneri 2002017 Universal stress protein G YP_005726189.1 561229 R 591020 CDS YP_005726190.1 384542128 12316521 561878..563116 1 NC_017328.1 putative oxidoreductase 563116 ybdR 12316521 ybdR Shigella flexneri 2002017 putative oxidoreductase YP_005726190.1 561878 D 591020 CDS YP_005726191.1 384542129 12316522 563197..563658 1 NC_017328.1 hypothetical protein 563658 12316522 SFxv_0582 Shigella flexneri 2002017 hypothetical protein YP_005726191.1 563197 D 591020 CDS YP_005726192.1 384542130 12316523 complement(563347..563757) 1 NC_017328.1 Regulator of nucleoside diphosphate kinase 563757 rnk 12316523 rnk Shigella flexneri 2002017 Regulator of nucleoside diphosphate kinase YP_005726192.1 563347 R 591020 CDS YP_005726193.1 384542131 12316524 complement(563986..564810) 1 NC_017328.1 RNase I 564810 rna 12316524 rna Shigella flexneri 2002017 RNase I YP_005726193.1 563986 R 591020 CDS YP_005726194.1 384542132 12316526 complement(566420..567298) 1 NC_017328.1 putative 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase 567298 citG 12316526 citG Shigella flexneri 2002017 putative 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase YP_005726194.1 566420 R 591020 CDS YP_005726195.1 384542133 12316527 complement(567335..567823) 1 NC_017328.1 putative apo-citrate lyase phosphoribosyl-dephospho-CoA transferase 567823 citX 12316527 citX Shigella flexneri 2002017 putative apo-citrate lyase phosphoribosyl-dephospho-CoA transferase YP_005726195.1 567335 R 591020 CDS YP_005726196.1 384542134 12316528 complement(567827..569401) 1 NC_017328.1 Citrate lyase alpha chain 569401 citF 12316528 citF Shigella flexneri 2002017 Citrate lyase alpha chain YP_005726196.1 567827 R 591020 CDS YP_005726197.1 384542135 12316529 complement(569370..570293) 1 NC_017328.1 Citrate lyase beta chain 570293 citE 12316529 citE Shigella flexneri 2002017 Citrate lyase beta chain YP_005726197.1 569370 R 591020 CDS YP_005726198.1 384542136 12316530 complement(570275..570571) 1 NC_017328.1 Citrate lyase acyl carrier protein 570571 citD 12316530 citD Shigella flexneri 2002017 Citrate lyase acyl carrier protein YP_005726198.1 570275 R 591020 CDS YP_005726199.1 384542137 12316531 complement(570586..571731) 1 NC_017328.1 Citrate lyase synthetase (Citrate (Pro-3S)-lyase ligase) 571731 citC 12316531 citC Shigella flexneri 2002017 Citrate lyase synthetase (Citrate (Pro-3S)-lyase ligase) YP_005726199.1 570586 R 591020 CDS YP_005726200.1 384542138 12316532 complement(572111..572614) 1 NC_017328.1 putative IS1 family transposase 572614 12316532 SFxv_0592 Shigella flexneri 2002017 putative IS1 family transposase YP_005726200.1 572111 R 591020 CDS YP_005726201.1 384542139 12316533 572728..573441 1 NC_017328.1 putative integrase 573441 12316533 SFxv_0593 Shigella flexneri 2002017 putative integrase YP_005726201.1 572728 D 591020 CDS YP_005726202.1 384542140 12316534 573575..574495 1 NC_017328.1 cof family hydrolase 574495 ybhA 12316534 ybhA Shigella flexneri 2002017 cof family hydrolase YP_005726202.1 573575 D 591020 CDS YP_005726203.1 384542141 12316535 complement(574496..575554) 1 NC_017328.1 Molybdenum import ATP-binding protein modC 575554 modC 12316535 modC Shigella flexneri 2002017 Molybdenum import ATP-binding protein modC YP_005726203.1 574496 R 591020 CDS YP_005726204.1 384542142 12316536 complement(575557..576246) 1 NC_017328.1 Molybdate transport permease protein 576246 modB 12316536 modB Shigella flexneri 2002017 Molybdate transport permease protein YP_005726204.1 575557 R 591020 CDS YP_005726205.1 384542143 12316537 complement(576246..577019) 1 NC_017328.1 Molybdate-binding periplasmic protein; permease 577019 modA 12316537 modA Shigella flexneri 2002017 Molybdate-binding periplasmic protein; permease YP_005726205.1 576246 R 591020 CDS YP_005726206.1 384542144 12316538 complement(577186..577335) 1 NC_017328.1 hypothetical protein 577335 12316538 SFxv_0598 Shigella flexneri 2002017 hypothetical protein YP_005726206.1 577186 R 591020 CDS YP_005726207.1 384542145 12316539 577464..578252 1 NC_017328.1 transcriptional regulator modE 578252 modE 12316539 modE Shigella flexneri 2002017 transcriptional regulator modE YP_005726207.1 577464 D 591020 CDS YP_005726208.1 384542146 12316540 578320..579792 1 NC_017328.1 ATP-binding component of molybdate transport system 579792 modF 12316540 modF Shigella flexneri 2002017 ATP-binding component of molybdate transport system YP_005726208.1 578320 D 591020 CDS YP_005726209.1 384542147 12316541 580053..581069 1 NC_017328.1 UDP-galactose-4-epimerase 581069 galE 12316541 galE Shigella flexneri 2002017 UDP-galactose-4-epimerase YP_005726209.1 580053 D 591020 CDS YP_005726210.1 384542148 12316542 581079..582125 1 NC_017328.1 galactose-1-phosphate uridylyltransferase 582125 galT 12316542 galT Shigella flexneri 2002017 galactose-1-phosphate uridylyltransferase YP_005726210.1 581079 D 591020 CDS YP_005726211.1 384542149 12316543 582129..583277 1 NC_017328.1 galactokinase 583277 galK 12316543 galK Shigella flexneri 2002017 galactokinase YP_005726211.1 582129 D 591020 CDS YP_005726212.1 384542150 12316544 583271..584311 1 NC_017328.1 aldose 1-epimerase 584311 galM 12316544 galM Shigella flexneri 2002017 aldose 1-epimerase YP_005726212.1 583271 D 591020 CDS YP_005726213.1 384542151 12316545 584514..585266 1 NC_017328.1 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 585266 gpmA 12316545 gpmA Shigella flexneri 2002017 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase YP_005726213.1 584514 D 591020 CDS YP_005726214.1 384542152 12316546 complement(585433..586485) 1 NC_017328.1 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase 586485 aroG 12316546 aroG Shigella flexneri 2002017 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase YP_005726214.1 585433 R 591020 CDS YP_005726215.1 384542153 12316547 586801..587181 1 NC_017328.1 hypothetical protein 587181 12316547 SFxv_0607 Shigella flexneri 2002017 hypothetical protein YP_005726215.1 586801 D 591020 CDS YP_005726216.1 384542154 12316548 587295..588236 1 NC_017328.1 Zinc transporter zitB 588236 zitB 12316548 zitB Shigella flexneri 2002017 Zinc transporter zitB YP_005726216.1 587295 D 591020 CDS YP_005726217.1 384542155 12316549 complement(588233..588952) 1 NC_017328.1 Nicotinamide mononucleotide transporter PnuC 588952 pnuC 12316549 pnuC Shigella flexneri 2002017 Nicotinamide mononucleotide transporter PnuC YP_005726217.1 588233 R 591020 CDS YP_005726218.1 384542156 12316550 complement(588990..590033) 1 NC_017328.1 Quinolinate synthetase A 590033 nadA 12316550 nadA Shigella flexneri 2002017 Quinolinate synthetase A YP_005726218.1 588990 R 591020 CDS YP_005726219.1 384542157 12316556 complement(591017..591808) 1 NC_017328.1 hypothetical protein 591808 ybgF 12316556 ybgF Shigella flexneri 2002017 hypothetical protein YP_005726219.1 591017 R 591020 CDS YP_005726220.1 384542158 12316557 complement(591818..592339) 1 NC_017328.1 Peptidoglycan-associated lipoprotein 592339 pal 12316557 pal Shigella flexneri 2002017 Peptidoglycan-associated lipoprotein YP_005726220.1 591818 R 591020 CDS YP_005726221.1 384542159 12316558 complement(592374..593666) 1 NC_017328.1 Protein tolB precursor 593666 tolB 12316558 tolB Shigella flexneri 2002017 Protein tolB precursor YP_005726221.1 592374 R 591020 CDS YP_005726222.1 384542160 12316559 complement(593799..593945) 1 NC_017328.1 TolA colicin import membrane protein 593945 tolA 12316559 tolA Shigella flexneri 2002017 TolA colicin import membrane protein YP_005726222.1 593799 R 591020 CDS YP_005726223.1 384542161 12316560 complement(595105..595533) 1 NC_017328.1 Protein tolR 595533 tolR 12316560 tolR Shigella flexneri 2002017 Protein tolR YP_005726223.1 595105 R 591020 CDS YP_005726224.1 384542162 12316561 complement(595537..596229) 1 NC_017328.1 Inner membrane protein 596229 tolQ 12316561 tolQ Shigella flexneri 2002017 Inner membrane protein YP_005726224.1 595537 R 591020 CDS YP_005726225.1 384542163 12316562 complement(596226..596630) 1 NC_017328.1 putative esterase YbgC 596630 ybgC 12316562 ybgC Shigella flexneri 2002017 putative esterase YbgC YP_005726225.1 596226 R 591020 CDS YP_005726226.1 384542164 12316563 complement(596780..597073) 1 NC_017328.1 hypothetical protein 597073 ybgE 12316563 ybgE Shigella flexneri 2002017 hypothetical protein YP_005726226.1 596780 R 591020 CDS YP_005726227.1 384542165 12316564 complement(597073..597186) 1 NC_017328.1 Cyd operon protein YbgT 597186 ybgT 12316564 ybgT Shigella flexneri 2002017 Cyd operon protein YbgT YP_005726227.1 597073 R 591020 CDS YP_005726228.1 384542166 12316565 complement(597201..598340) 1 NC_017328.1 Cytochrome d terminal oxidase polypeptide subunit II 598340 cydB 12316565 cydB Shigella flexneri 2002017 Cytochrome d terminal oxidase polypeptide subunit II YP_005726228.1 597201 R 591020 CDS YP_005726229.1 384542167 12316566 complement(598356..599927) 1 NC_017328.1 Cytochrome d ubiquinol oxidase subunit 1 599927 cydA 12316566 cydA Shigella flexneri 2002017 Cytochrome d ubiquinol oxidase subunit 1 YP_005726229.1 598356 R 591020 CDS YP_005726230.1 384542168 12316567 complement(600521..600748) 1 NC_017328.1 hypothetical protein 600748 12316567 SFxv_0622 Shigella flexneri 2002017 hypothetical protein YP_005726230.1 600521 R 591020 CDS YP_005726231.1 384542169 12316568 complement(600773..603406) 1 NC_017328.1 putative sugar hydrolase 603406 mngB 12316568 mngB Shigella flexneri 2002017 putative sugar hydrolase YP_005726231.1 600773 R 591020 CDS YP_005726232.1 384542170 12316569 complement(603424..605400) 1 NC_017328.1 Protein modification enzyme 605400 mngA 12316569 mngA Shigella flexneri 2002017 Protein modification enzyme YP_005726232.1 603424 R 591020 CDS YP_005726233.1 384542171 12316571 complement(606335..607204) 1 NC_017328.1 succinyl-CoA ligase subunit alpha 607204 sucD 12316571 sucD Shigella flexneri 2002017 succinyl-CoA ligase subunit alpha YP_005726233.1 606335 R 591020 CDS YP_005726234.1 384542172 12316572 complement(607204..608370) 1 NC_017328.1 succinyl-CoA synthetase subunit beta 608370 sucC 12316572 sucC Shigella flexneri 2002017 succinyl-CoA synthetase subunit beta YP_005726234.1 607204 R 591020 CDS YP_005726235.1 384542173 12316573 complement(608464..609681) 1 NC_017328.1 2-oxoglutarate dehydrogenase 609681 sucB 12316573 sucB Shigella flexneri 2002017 2-oxoglutarate dehydrogenase YP_005726235.1 608464 R 591020 CDS YP_005726236.1 384542174 12316574 complement(609696..612497) 1 NC_017328.1 2-oxoglutarate dehydrogenase 612497 sucA 12316574 sucA Shigella flexneri 2002017 2-oxoglutarate dehydrogenase YP_005726236.1 609696 R 591020 CDS YP_005726237.1 384542175 12316575 complement(612479..612739) 1 NC_017328.1 hypothetical protein 612739 12316575 SFxv_0631 Shigella flexneri 2002017 hypothetical protein YP_005726237.1 612479 R 591020 CDS YP_005726238.1 384542176 12316576 complement(612798..613514) 1 NC_017328.1 Succinate dehydrogenase, iron sulfur protein 613514 sdhB 12316576 sdhB Shigella flexneri 2002017 Succinate dehydrogenase, iron sulfur protein YP_005726238.1 612798 R 591020 CDS YP_005726239.1 384542177 12316577 complement(613530..615296) 1 NC_017328.1 Succinate dehydrogenase, flavoprotein subunit 615296 sdhA 12316577 sdhA Shigella flexneri 2002017 Succinate dehydrogenase, flavoprotein subunit YP_005726239.1 613530 R 591020 CDS YP_005726240.1 384542178 12316578 complement(615296..615643) 1 NC_017328.1 Succinate dehydrogenase hydrophobic membrane anchor subunit 615643 sdhD 12316578 sdhD Shigella flexneri 2002017 Succinate dehydrogenase hydrophobic membrane anchor subunit YP_005726240.1 615296 R 591020 CDS YP_005726241.1 384542179 12316579 complement(615637..616026) 1 NC_017328.1 Succinate dehydrogenase cytochrome b-556 subunit 616026 sdhC 12316579 sdhC Shigella flexneri 2002017 Succinate dehydrogenase cytochrome b-556 subunit YP_005726241.1 615637 R 591020 CDS YP_005726242.1 384542180 12316580 complement(616562..616747) 1 NC_017328.1 putative inner membrane protein 616747 12316580 SFxv_0637 Shigella flexneri 2002017 putative inner membrane protein YP_005726242.1 616562 R 591020 CDS YP_005726243.1 384542181 12316581 616735..618018 1 NC_017328.1 Citrate synthase 618018 gltA 12316581 gltA Shigella flexneri 2002017 Citrate synthase YP_005726243.1 616735 D 591020 CDS YP_005726244.1 384542182 12316582 618429..618974 1 NC_017328.1 putative fimbrial-like protein 618974 ybgD 12316582 ybgD Shigella flexneri 2002017 putative fimbrial-like protein YP_005726244.1 618429 D 591020 CDS YP_005726245.1 384542183 12316583 618983..621484 1 NC_017328.1 putative outer membrane protein 621484 ybgQ 12316583 ybgQ Shigella flexneri 2002017 putative outer membrane protein YP_005726245.1 618983 D 591020 CDS YP_005726246.1 384542184 12316584 621499..622230 1 NC_017328.1 Periplasmic pilus chaperone family protein 622230 ybgP 12316584 ybgP Shigella flexneri 2002017 Periplasmic pilus chaperone family protein YP_005726246.1 621499 D 591020 CDS YP_005726247.1 384542185 12316586 623410..624501 1 NC_017328.1 putative transport protein 624501 abrB 12316586 abrB Shigella flexneri 2002017 putative transport protein YP_005726247.1 623410 D 591020 CDS YP_005726248.1 384542186 12316587 complement(624498..625289) 1 NC_017328.1 Endonuclease VIII 625289 nei 12316587 nei Shigella flexneri 2002017 Endonuclease VIII YP_005726248.1 624498 R 591020 CDS YP_005726249.1 384542187 12316588 complement(625325..626059) 1 NC_017328.1 protein ybgL 626059 ybgL 12316588 ybgL Shigella flexneri 2002017 protein ybgL YP_005726249.1 625325 R 591020 CDS YP_005726250.1 384542188 12316590 complement(626975..627631) 1 NC_017328.1 putative carboxylase 627631 ybgJ 12316590 ybgJ Shigella flexneri 2002017 putative carboxylase YP_005726250.1 626975 R 591020 CDS YP_005726251.1 384542189 12316591 complement(627654..628397) 1 NC_017328.1 NIF3 family protein 628397 ybgI 12316591 ybgI Shigella flexneri 2002017 NIF3 family protein YP_005726251.1 627654 R 591020 CDS YP_005726252.1 384542190 12316592 628668..630149 1 NC_017328.1 putative pipeptide/tripeptide permease 630149 ybgH 12316592 ybgH Shigella flexneri 2002017 putative pipeptide/tripeptide permease YP_005726252.1 628668 D 591020 CDS YP_005726253.1 384542191 12316593 complement(630299..631717) 1 NC_017328.1 Deoxyribodipyrimidine photolyase 631717 phr 12316593 phr Shigella flexneri 2002017 Deoxyribodipyrimidine photolyase YP_005726253.1 630299 R 591020 CDS YP_005726254.1 384542192 12316594 complement(631714..632223) 1 NC_017328.1 hypothetical protein 632223 12316594 SFxv_0650 Shigella flexneri 2002017 hypothetical protein YP_005726254.1 631714 R 591020 CDS YP_005726255.1 384542193 12316595 632352..632639 1 NC_017328.1 hypothetical protein 632639 12316595 SFxv_0651 Shigella flexneri 2002017 hypothetical protein YP_005726255.1 632352 D 591020 CDS YP_005726256.1 384542194 12316596 complement(632694..633014) 1 NC_017328.1 hypothetical protein 633014 12316596 SFxv_0652 Shigella flexneri 2002017 hypothetical protein YP_005726256.1 632694 R 591020 CDS YP_005726257.1 384542195 12316597 complement(633077..636463) 1 NC_017328.1 putative Rhs-family protein 636463 12316597 SFxv_0653 Shigella flexneri 2002017 putative Rhs-family protein YP_005726257.1 633077 R 591020 CDS YP_005726258.1 384542196 12316598 complement(636482..636682) 1 NC_017328.1 hypothetical protein 636682 12316598 SFxv_0654 Shigella flexneri 2002017 hypothetical protein YP_005726258.1 636482 R 591020 CDS YP_005726259.1 384542197 12316599 complement(637079..637582) 1 NC_017328.1 putative IS1 family transposase 637582 12316599 SFxv_0655 Shigella flexneri 2002017 putative IS1 family transposase YP_005726259.1 637079 R 591020 CDS YP_005726260.1 384542198 12316681 637696..637872 1 NC_017328.1 putative integrase 637872 12316681 SFxv_0656 Shigella flexneri 2002017 putative integrase YP_005726260.1 637696 D 591020 CDS YP_005726261.1 384542199 12316682 complement(638270..638476) 1 NC_017328.1 hypothetical protein 638476 12316682 SFxv_0657 Shigella flexneri 2002017 hypothetical protein YP_005726261.1 638270 R 591020 CDS YP_005726262.1 384542200 12316683 638878..640551 1 NC_017328.1 Potassium-transporting ATPase subunit A 640551 kdpA 12316683 kdpA Shigella flexneri 2002017 Potassium-transporting ATPase subunit A YP_005726262.1 638878 D 591020 CDS YP_005726263.1 384542201 12316685 642630..643202 1 NC_017328.1 Potassium-transporting ATPase subunit C 643202 kdpC 12316685 kdpC Shigella flexneri 2002017 Potassium-transporting ATPase subunit C YP_005726263.1 642630 D 591020 CDS YP_005726264.1 384542202 12316688 complement(646579..646713) 1 NC_017328.1 hypothetical protein 646713 12316688 SFxv_0663 Shigella flexneri 2002017 hypothetical protein YP_005726264.1 646579 R 591020 CDS YP_005726265.1 384542203 12316690 649441..650760 1 NC_017328.1 Putrescine-ornithine antiporter 650760 potE 12316690 potE Shigella flexneri 2002017 Putrescine-ornithine antiporter YP_005726265.1 649441 D 591020 CDS YP_005726266.1 384542204 12316691 complement(650816..652456) 1 NC_017328.1 Phosphoglucomutase 652456 pgm 12316691 pgm Shigella flexneri 2002017 Phosphoglucomutase YP_005726266.1 650816 R 591020 CDS YP_005726267.1 384542205 12316692 complement(652482..653060) 1 NC_017328.1 Negative modulator of initiation of replication 653060 seqA 12316692 seqA Shigella flexneri 2002017 Negative modulator of initiation of replication YP_005726267.1 652482 R 591020 CDS YP_005726268.1 384542206 12316693 653212..653976 1 NC_017328.1 Alpha/beta hydrolase fold protein 653976 ybfF 12316693 ybfF Shigella flexneri 2002017 Alpha/beta hydrolase fold protein YP_005726268.1 653212 D 591020 CDS YP_005726269.1 384542207 12316694 654047..654409 1 NC_017328.1 CopG family transcriptional regulator 654409 ybfE 12316694 ybfE Shigella flexneri 2002017 CopG family transcriptional regulator YP_005726269.1 654047 D 591020 CDS YP_005726270.1 384542208 12316695 654432..655079 1 NC_017328.1 Flavodoxin-1 655079 fldA 12316695 fldA Shigella flexneri 2002017 Flavodoxin-1 YP_005726270.1 654432 D 591020 CDS YP_005726271.1 384542209 12316696 655368..655814 1 NC_017328.1 Ferric uptake regulation protein 655814 fur 12316696 fur Shigella flexneri 2002017 Ferric uptake regulation protein YP_005726271.1 655368 D 591020 CDS YP_005726272.1 384542210 12316697 655847..656065 1 NC_017328.1 hypothetical protein 656065 12316697 SFxv_0674 Shigella flexneri 2002017 hypothetical protein YP_005726272.1 655847 D 591020 CDS YP_005726273.1 384542211 12316698 complement(655898..656242) 1 NC_017328.1 putative lipoprotein 656242 ybfN 12316698 ybfN Shigella flexneri 2002017 putative lipoprotein YP_005726273.1 655898 R 591020 CDS YP_005726274.1 384542212 12316699 complement(656261..657667) 1 NC_017328.1 Porin D 657667 ybfM 12316699 ybfM Shigella flexneri 2002017 Porin D YP_005726274.1 656261 R 591020 CDS YP_005726275.1 384542213 12316700 complement(658246..659910) 1 NC_017328.1 glutaminyl-tRNA synthetase 659910 glnS 12316700 glnS Shigella flexneri 2002017 glutaminyl-tRNA synthetase YP_005726275.1 658246 R 591020 CDS YP_005726276.1 384542214 12316701 complement(660113..662059) 1 NC_017328.1 PTS system N-acetylglucosamine-specific EIICBA component (EIICBA-Nag) (EII-Nag) 662059 nagE 12316701 nagE Shigella flexneri 2002017 PTS system N-acetylglucosamine-specific EIICBA component (EIICBA-Nag) (EII-Nag) YP_005726276.1 660113 R 591020 CDS YP_005726277.1 384542215 12316702 662392..663192 1 NC_017328.1 glucosamine-6-phosphate deaminase 663192 nagB 12316702 nagB Shigella flexneri 2002017 glucosamine-6-phosphate deaminase YP_005726277.1 662392 D 591020 CDS YP_005726278.1 384542216 12316703 663252..664400 1 NC_017328.1 N-acetylglucosamine-6-phosphate deacetylase 664400 nagA 12316703 nagA Shigella flexneri 2002017 N-acetylglucosamine-6-phosphate deacetylase YP_005726278.1 663252 D 591020 CDS YP_005726279.1 384542217 12316704 664409..665629 1 NC_017328.1 N-acetylglucosamine repressor 665629 nagC 12316704 nagC Shigella flexneri 2002017 N-acetylglucosamine repressor YP_005726279.1 664409 D 591020 CDS YP_005726280.1 384542218 12316706 666826..668490 1 NC_017328.1 Asparagine synthetase B 668490 asnB 12316706 asnB Shigella flexneri 2002017 Asparagine synthetase B YP_005726280.1 666826 D 591020 CDS YP_005726281.1 384542219 12316714 complement(669726..670901) 1 NC_017328.1 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase 670901 ubiF 12316714 ubiF Shigella flexneri 2002017 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase YP_005726281.1 669726 R 591020 CDS YP_005726282.1 384542220 12316715 671047..672471 1 NC_017328.1 protein yleA 672471 miaB 12316715 miaB Shigella flexneri 2002017 protein yleA YP_005726282.1 671047 D 591020 CDS YP_005726283.1 384542221 12316716 672585..673664 1 NC_017328.1 putative phosphate starvation-inducible protein 673664 ybeZ 12316716 ybeZ Shigella flexneri 2002017 putative phosphate starvation-inducible protein YP_005726283.1 672585 D 591020 CDS YP_005726284.1 384542222 12316717 673661..674128 1 NC_017328.1 putative metal-dependent hydrolase 674128 ybeY 12316717 ybeY Shigella flexneri 2002017 putative metal-dependent hydrolase YP_005726284.1 673661 D 591020 CDS YP_005726285.1 384542223 12316718 674218..675096 1 NC_017328.1 Magnesium and cobalt efflux protein corC 675096 ybeX 12316718 ybeX Shigella flexneri 2002017 Magnesium and cobalt efflux protein corC YP_005726285.1 674218 D 591020 CDS YP_005726286.1 384542224 12316719 675121..676659 1 NC_017328.1 apolipoprotein N-acyltransferase 676659 12316719 SFxv_0691 Shigella flexneri 2002017 apolipoprotein N-acyltransferase YP_005726286.1 675121 D 591020 CDS YP_005726287.1 384542225 12316720 676981..677964 1 NC_017328.1 putative periplasmic binding transport protein 677964 gltI 12316720 gltI Shigella flexneri 2002017 putative periplasmic binding transport protein YP_005726287.1 676981 D 591020 CDS YP_005726288.1 384542226 12316721 678134..678874 1 NC_017328.1 Glutamate/aspartate transport system permease 678874 gltJ 12316721 gltJ Shigella flexneri 2002017 Glutamate/aspartate transport system permease YP_005726288.1 678134 D 591020 CDS YP_005726289.1 384542227 12316722 678874..679548 1 NC_017328.1 Glutamate/aspartate transport system permease 679548 gltK 12316722 gltK Shigella flexneri 2002017 Glutamate/aspartate transport system permease YP_005726289.1 678874 D 591020 CDS YP_005726290.1 384542228 12316723 679548..680273 1 NC_017328.1 glutamate/aspartate ABC transporter ATP-binding protein 680273 gltL 12316723 gltL Shigella flexneri 2002017 glutamate/aspartate ABC transporter ATP-binding protein YP_005726290.1 679548 D 591020 CDS YP_005726291.1 384542229 12316724 680391..681326 1 NC_017328.1 Pyrimidine-specific ribonucleoside hydrolase rihA 681326 rihA 12316724 rihA Shigella flexneri 2002017 Pyrimidine-specific ribonucleoside hydrolase rihA YP_005726291.1 680391 D 591020 CDS YP_005726292.1 384542230 12316726 complement(683140..684591) 1 NC_017328.1 hypothetical protein 684591 12316726 SFxv_0699 Shigella flexneri 2002017 hypothetical protein YP_005726292.1 683140 R 591020 CDS YP_005726293.1 384542231 12316727 complement(684588..685295) 1 NC_017328.1 putative tRNA ligase 685295 12316727 SFxv_0700 Shigella flexneri 2002017 putative tRNA ligase YP_005726293.1 684588 R 591020 CDS YP_005726294.1 384542232 12316728 685397..685951 1 NC_017328.1 hypothetical protein 685951 12316728 SFxv_0701 Shigella flexneri 2002017 hypothetical protein YP_005726294.1 685397 D 591020 CDS YP_005726295.1 384542233 12316729 complement(685961..687388) 1 NC_017328.1 putative enzyme of polynucleotide modification 687388 djlB 12316729 djlB Shigella flexneri 2002017 putative enzyme of polynucleotide modification YP_005726295.1 685961 R 591020 CDS YP_005726296.1 384542234 12316730 complement(687385..688092) 1 NC_017328.1 hypothetical protein 688092 12316730 SFxv_0703 Shigella flexneri 2002017 hypothetical protein YP_005726296.1 687385 R 591020 CDS YP_005726297.1 384542235 12316731 688250..689233 1 NC_017328.1 hypothetical protein 689233 12316731 SFxv_0704 Shigella flexneri 2002017 hypothetical protein YP_005726297.1 688250 D 591020 CDS YP_005726298.1 384542236 12316732 complement(689303..689785) 1 NC_017328.1 putative F0F1-type ATP synthase, subunit b 689785 12316732 SFxv_0705 Shigella flexneri 2002017 putative F0F1-type ATP synthase, subunit b YP_005726298.1 689303 R 591020 CDS YP_005726299.1 384542237 12316733 689927..692602 1 NC_017328.1 leucyl-tRNA synthetase 692602 leuS 12316733 leuS Shigella flexneri 2002017 leucyl-tRNA synthetase YP_005726299.1 689927 D 591020 CDS YP_005726300.1 384542238 12316734 692617..693198 1 NC_017328.1 LPS-assembly lipoprotein rlpB 693198 rlpB 12316734 rlpB Shigella flexneri 2002017 LPS-assembly lipoprotein rlpB YP_005726300.1 692617 D 591020 CDS YP_005726301.1 384542239 12316735 693198..694229 1 NC_017328.1 DNA polymerase III subunit delta 694229 holA 12316735 holA Shigella flexneri 2002017 DNA polymerase III subunit delta YP_005726301.1 693198 D 591020 CDS YP_005726302.1 384542240 12316736 694231..694872 1 NC_017328.1 Nicotinate-nucleotide adenylyltransferase 694872 nadD 12316736 nadD Shigella flexneri 2002017 Nicotinate-nucleotide adenylyltransferase YP_005726302.1 694231 D 591020 CDS YP_005726303.1 384542241 12316737 694896..695507 1 NC_017328.1 cobC 695507 cobC 12316737 cobC Shigella flexneri 2002017 cobC YP_005726303.1 694896 D 591020 CDS YP_005726304.1 384542242 12316738 695767..696084 1 NC_017328.1 hypothetical protein 696084 12316738 SFxv_0711 Shigella flexneri 2002017 hypothetical protein YP_005726304.1 695767 D 591020 CDS YP_005726305.1 384542243 12316739 696088..696555 1 NC_017328.1 protein ybeA 696555 ybeA 12316739 ybeA Shigella flexneri 2002017 protein ybeA YP_005726305.1 696088 D 591020 CDS YP_005726306.1 384542244 12316740 696586..698487 1 NC_017328.1 penicillin-binding protein 2 698487 mrdA 12316740 mrdA Shigella flexneri 2002017 penicillin-binding protein 2 YP_005726306.1 696586 D 591020 CDS YP_005726307.1 384542245 12316741 698547..699602 1 NC_017328.1 Rod shape-determining protein rodA 699602 mrdB 12316741 mrdB Shigella flexneri 2002017 Rod shape-determining protein rodA YP_005726307.1 698547 D 591020 CDS YP_005726308.1 384542246 12316742 699613..700701 1 NC_017328.1 Minor lipoprotein 700701 rlpA 12316742 rlpA Shigella flexneri 2002017 Minor lipoprotein YP_005726308.1 699613 D 591020 CDS YP_005726309.1 384542247 12316743 700768..702051 1 NC_017328.1 D-alanyl-D-alanine carboxypeptidase 702051 dacA 12316743 dacA Shigella flexneri 2002017 D-alanyl-D-alanine carboxypeptidase YP_005726309.1 700768 D 591020 CDS YP_005726310.1 384542248 12316744 702162..702425 1 NC_017328.1 putative cytoplasmic protein 702425 ybeD 12316744 ybeD Shigella flexneri 2002017 putative cytoplasmic protein YP_005726310.1 702162 D 591020 CDS YP_005726311.1 384542249 12316745 702526..703167 1 NC_017328.1 Octanoyltransferase 703167 lipB 12316745 lipB Shigella flexneri 2002017 Octanoyltransferase YP_005726311.1 702526 D 591020 CDS YP_005726312.1 384542250 12316746 703426..704379 1 NC_017328.1 putative transcriptional regulator LYSR-type 704379 ybeF 12316746 ybeF Shigella flexneri 2002017 putative transcriptional regulator LYSR-type YP_005726312.1 703426 D 591020 CDS YP_005726313.1 384542251 12316747 704588..705553 1 NC_017328.1 lipoyl synthase 705553 lipA 12316747 lipA Shigella flexneri 2002017 lipoyl synthase YP_005726313.1 704588 D 591020 CDS YP_005726314.1 384542252 12316748 complement(705986..706774) 1 NC_017328.1 putative amidase 706774 12316748 SFxv_0722 Shigella flexneri 2002017 putative amidase YP_005726314.1 705986 R 591020 CDS YP_005726315.1 384542253 12316749 706867..707250 1 NC_017328.1 Protein crcB 707250 crcB 12316749 crcB Shigella flexneri 2002017 Protein crcB YP_005726315.1 706867 D 591020 CDS YP_005726316.1 384542254 12316750 complement(707305..707598) 1 NC_017328.1 Cold shock protein 707598 cspE 12316750 cspE Shigella flexneri 2002017 Cold shock protein YP_005726316.1 707305 R 591020 CDS YP_005726317.1 384542255 12316751 complement(707689..708273) 1 NC_017328.1 Protein crcA 708273 pagP 12316751 pagP Shigella flexneri 2002017 Protein crcA YP_005726317.1 707689 R 591020 CDS YP_005726318.1 384542256 12316752 708838..710223 1 NC_017328.1 Transport of dicarboxylates 710223 dcuC 12316752 dcuC Shigella flexneri 2002017 Transport of dicarboxylates YP_005726318.1 708838 D 591020 CDS YP_005726319.1 384542257 12316753 complement(710264..710605) 1 NC_017328.1 Transcriptional regulatory protein dpiA 710605 dpiA 12316753 dpiA Shigella flexneri 2002017 Transcriptional regulatory protein dpiA YP_005726319.1 710264 R 591020 CDS YP_005726320.1 384542258 12316754 complement(710943..711452) 1 NC_017328.1 putative repressor protein 711452 12316754 SFxv_0728 Shigella flexneri 2002017 putative repressor protein YP_005726320.1 710943 R 591020 CDS YP_005726321.1 384542259 12316755 711624..711860 1 NC_017328.1 Ner-like protein 711860 12316755 SFxv_0729 Shigella flexneri 2002017 Ner-like protein YP_005726321.1 711624 D 591020 CDS YP_005726322.1 384542260 12316756 711835..713469 1 NC_017328.1 putative transposase 713469 12316756 SFxv_0730 Shigella flexneri 2002017 putative transposase YP_005726322.1 711835 D 591020 CDS YP_005726323.1 384542261 12316757 713869..714687 1 NC_017328.1 IS600 ORF2 714687 12316757 SFxv_0731 Shigella flexneri 2002017 IS600 ORF2 YP_005726323.1 713869 D 591020 CDS YP_005726324.1 384542262 12316758 complement(714684..714929) 1 NC_017328.1 hypothetical protein 714929 12316758 SFxv_0733 Shigella flexneri 2002017 hypothetical protein YP_005726324.1 714684 R 591020 CDS YP_005726325.1 384542263 12316759 complement(714971..715912) 1 NC_017328.1 putative bacteriophage protein 715912 12316759 SFxv_0734 Shigella flexneri 2002017 putative bacteriophage protein YP_005726325.1 714971 R 591020 CDS YP_005726326.1 384542264 12316760 complement(716057..716413) 1 NC_017328.1 putative Cation transport ATPase 716413 12316760 SFxv_0735 Shigella flexneri 2002017 putative Cation transport ATPase YP_005726326.1 716057 R 591020 CDS YP_005726327.1 384542265 12316761 complement(716417..717637) 1 NC_017328.1 putative bacteriophage protein 717637 12316761 SFxv_0736 Shigella flexneri 2002017 putative bacteriophage protein YP_005726327.1 716417 R 591020 CDS YP_005726328.1 384542266 12316843 complement(717641..718099) 1 NC_017328.1 putative bacteriophage protein 718099 12316843 SFxv_0737 Shigella flexneri 2002017 putative bacteriophage protein YP_005726328.1 717641 R 591020 CDS YP_005726329.1 384542267 12316844 complement(718275..719741) 1 NC_017328.1 putative bacteriophage protein 719741 12316844 SFxv_0738 Shigella flexneri 2002017 putative bacteriophage protein YP_005726329.1 718275 R 591020 CDS YP_005726330.1 384542268 12316845 complement(719962..720501) 1 NC_017328.1 putative bacteriophage protein 720501 12316845 SFxv_0739 Shigella flexneri 2002017 putative bacteriophage protein YP_005726330.1 719962 R 591020 CDS YP_005726331.1 384542269 12316846 complement(720486..721391) 1 NC_017328.1 IS2 ORF2 721391 12316846 SFxv_0742 Shigella flexneri 2002017 IS2 ORF2 YP_005726331.1 720486 R 591020 CDS YP_005726332.1 384542270 12316847 720915..721346 1 NC_017328.1 putative IS2 ORF 721346 12316847 SFxv_0740 Shigella flexneri 2002017 putative IS2 ORF YP_005726332.1 720915 D 591020 CDS YP_005726333.1 384542271 12316848 complement(721349..721714) 1 NC_017328.1 IS2 ORF1 721714 12316848 SFxv_0743 Shigella flexneri 2002017 IS2 ORF1 YP_005726333.1 721349 R 591020 CDS YP_005726334.1 384542272 12316849 complement(721790..722491) 1 NC_017328.1 putative bacteriophage protein 722491 12316849 SFxv_0744 Shigella flexneri 2002017 putative bacteriophage protein YP_005726334.1 721790 R 591020 CDS YP_005726335.1 384542273 12316850 complement(722424..723188) 1 NC_017328.1 putative bacteriophage protein 723188 12316850 SFxv_0745 Shigella flexneri 2002017 putative bacteriophage protein YP_005726335.1 722424 R 591020 CDS YP_005726336.1 384542274 12316851 723383..723895 1 NC_017328.1 hypothetical protein 723895 12316851 SFxv_0746 Shigella flexneri 2002017 hypothetical protein YP_005726336.1 723383 D 591020 CDS YP_005726337.1 384542275 12316852 complement(724028..724255) 1 NC_017328.1 putative lipoprotein Rz1 724255 12316852 SFxv_0747 Shigella flexneri 2002017 putative lipoprotein Rz1 YP_005726337.1 724028 R 591020 CDS YP_005726338.1 384542276 12316853 725111..725470 1 NC_017328.1 IS911 orfA 725470 12316853 SFxv_0748 Shigella flexneri 2002017 IS911 orfA YP_005726338.1 725111 D 591020 CDS YP_005726339.1 384542277 12316854 725400..725921 1 NC_017328.1 putative bacteriophage protein 725921 12316854 SFxv_0749 Shigella flexneri 2002017 putative bacteriophage protein YP_005726339.1 725400 D 591020 CDS YP_005726340.1 384542278 12316859 727025..727192 1 NC_017328.1 Lysis protein S 727192 12316859 SFxv_0750 Shigella flexneri 2002017 Lysis protein S YP_005726340.1 727025 D 591020 CDS YP_005726341.1 384542279 12316860 complement(727233..728024) 1 NC_017328.1 IS600 ORF2 728024 12316860 SFxv_0751 Shigella flexneri 2002017 IS600 ORF2 YP_005726341.1 727233 R 591020 CDS YP_005726342.1 384542280 12316861 728638..730497 1 NC_017328.1 putative bacteriophage protein 730497 12316861 SFxv_0753 Shigella flexneri 2002017 putative bacteriophage protein YP_005726342.1 728638 D 591020 CDS YP_005726343.1 384542281 12316862 complement(730472..731311) 1 NC_017328.1 IS911 orfA 731311 12316862 SFxv_0754 Shigella flexneri 2002017 IS911 orfA YP_005726343.1 730472 R 591020 CDS YP_005726344.1 384542282 12316863 732608..733999 1 NC_017328.1 putative helicase 733999 12316863 SFxv_0755 Shigella flexneri 2002017 putative helicase YP_005726344.1 732608 D 591020 CDS YP_005726345.1 384542283 12316864 733996..734253 1 NC_017328.1 putative bacteriophage protein 734253 12316864 SFxv_0756 Shigella flexneri 2002017 putative bacteriophage protein YP_005726345.1 733996 D 591020 CDS YP_005726346.1 384542284 12316865 734348..734548 1 NC_017328.1 putative bacteriophage protein 734548 12316865 SFxv_0757 Shigella flexneri 2002017 putative bacteriophage protein YP_005726346.1 734348 D 591020 CDS YP_005726347.1 384542285 12316866 734541..734921 1 NC_017328.1 Antitermination protein Q 734921 12316866 SFxv_0758 Shigella flexneri 2002017 Antitermination protein Q YP_005726347.1 734541 D 591020 CDS YP_005726348.1 384542286 12316871 735724..735939 1 NC_017328.1 Lysis protein S 735939 12316871 SFxv_0760 Shigella flexneri 2002017 Lysis protein S YP_005726348.1 735724 D 591020 CDS YP_005726349.1 384542287 12316872 735943..736572 1 NC_017328.1 hypothetical protein 736572 12316872 SFxv_0761 Shigella flexneri 2002017 hypothetical protein YP_005726349.1 735943 D 591020 CDS YP_005726350.1 384542288 12316873 736638..737171 1 NC_017328.1 lysozyme 737171 12316873 SFxv_0762 Shigella flexneri 2002017 lysozyme YP_005726350.1 736638 D 591020 CDS YP_005726351.1 384542289 12316874 737168..737572 1 NC_017328.1 Endopeptidase 737572 12316874 SFxv_0763 Shigella flexneri 2002017 Endopeptidase YP_005726351.1 737168 D 591020 CDS YP_005726352.1 384542290 12316875 737972..738790 1 NC_017328.1 IS600 ORF2 738790 12316875 SFxv_0764 Shigella flexneri 2002017 IS600 ORF2 YP_005726352.1 737972 D 591020 CDS YP_005726353.1 384542291 12316876 738818..739141 1 NC_017328.1 putative DNA packaging protein of prophage; terminase small subunit 739141 12316876 SFxv_0765 Shigella flexneri 2002017 putative DNA packaging protein of prophage; terminase small subunit YP_005726353.1 738818 D 591020 CDS YP_005726354.1 384542292 12316877 739113..741023 1 NC_017328.1 putative DNA packaging protein of prophage CP-933R; terminase large subunit 741023 12316877 SFxv_0766 Shigella flexneri 2002017 putative DNA packaging protein of prophage CP-933R; terminase large subunit YP_005726354.1 739113 D 591020 CDS YP_005726355.1 384542293 12316878 741024..741227 1 NC_017328.1 putative head completion protein gp3 741227 12316878 SFxv_0767 Shigella flexneri 2002017 putative head completion protein gp3 YP_005726355.1 741024 D 591020 CDS YP_005726356.1 384542294 12316879 741224..742279 1 NC_017328.1 Head-tail preconnector gp5 742279 12316879 SFxv_0768 Shigella flexneri 2002017 Head-tail preconnector gp5 YP_005726356.1 741224 D 591020 CDS YP_005726357.1 384542295 12316880 742807..744312 1 NC_017328.1 Head-tail preconnector gp5 744312 12316880 SFxv_0769 Shigella flexneri 2002017 Head-tail preconnector gp5 YP_005726357.1 742807 D 591020 CDS YP_005726358.1 384542296 12316881 744349..744696 1 NC_017328.1 Capsid protein small subunit 744696 12316881 SFxv_0770 Shigella flexneri 2002017 Capsid protein small subunit YP_005726358.1 744349 D 591020 CDS YP_005726359.1 384542297 12316882 744754..745782 1 NC_017328.1 Major capsid protein 745782 12316882 SFxv_0771 Shigella flexneri 2002017 Major capsid protein YP_005726359.1 744754 D 591020 CDS YP_005726360.1 384542298 12316883 745834..746220 1 NC_017328.1 putative DNA-packaging protein 746220 12316883 SFxv_0772 Shigella flexneri 2002017 putative DNA-packaging protein YP_005726360.1 745834 D 591020 CDS YP_005726361.1 384542299 12316884 746232..746609 1 NC_017328.1 putative tail attachment protein 746609 12316884 SFxv_0773 Shigella flexneri 2002017 putative tail attachment protein YP_005726361.1 746232 D 591020 CDS YP_005726362.1 384542300 12316885 746596..747180 1 NC_017328.1 putative tail component of prophage CP-933K 747180 12316885 SFxv_0774 Shigella flexneri 2002017 putative tail component of prophage CP-933K YP_005726362.1 746596 D 591020 CDS YP_005726363.1 384542301 12316886 747177..747578 1 NC_017328.1 putative tail component of prophage CP-933K 747578 12316886 SFxv_0775 Shigella flexneri 2002017 putative tail component of prophage CP-933K YP_005726363.1 747177 D 591020 CDS YP_005726364.1 384542302 12316887 747583..748329 1 NC_017328.1 putative tail component of prophage CP-933K 748329 12316887 SFxv_0776 Shigella flexneri 2002017 putative tail component of prophage CP-933K YP_005726364.1 747583 D 591020 CDS YP_005726365.1 384542303 12316888 748370..748774 1 NC_017328.1 putative tail component of prophage CP-933K 748774 12316888 SFxv_0777 Shigella flexneri 2002017 putative tail component of prophage CP-933K YP_005726365.1 748370 D 591020 CDS YP_005726366.1 384542304 12316889 748783..749112 1 NC_017328.1 putative tail component of prophage CP-933K 749112 12316889 SFxv_0778 Shigella flexneri 2002017 putative tail component of prophage CP-933K YP_005726366.1 748783 D 591020 CDS YP_005726367.1 384542305 12316891 752453..753151 1 NC_017328.1 Minor tail protein 753151 12316891 SFxv_0780 Shigella flexneri 2002017 Minor tail protein YP_005726367.1 752453 D 591020 CDS YP_005726368.1 384542306 12316892 753087..753899 1 NC_017328.1 Tail assembly protein 753899 12316892 SFxv_0781 Shigella flexneri 2002017 Tail assembly protein YP_005726368.1 753087 D 591020 CDS YP_005726369.1 384542307 12316893 753836..754438 1 NC_017328.1 putative tail component 754438 12316893 SFxv_0782 Shigella flexneri 2002017 putative tail component YP_005726369.1 753836 D 591020 CDS YP_005726370.1 384542308 12316894 754499..757978 1 NC_017328.1 Host specificity protein 757978 12316894 SFxv_0783 Shigella flexneri 2002017 Host specificity protein YP_005726370.1 754499 D 591020 CDS YP_005726371.1 384542309 12316895 758046..758645 1 NC_017328.1 hypothetical protein 758645 12316895 SFxv_0784 Shigella flexneri 2002017 hypothetical protein YP_005726371.1 758046 D 591020 CDS YP_005726372.1 384542310 12316896 758667..759770 1 NC_017328.1 putative tail component 759770 12316896 SFxv_0785 Shigella flexneri 2002017 putative tail component YP_005726372.1 758667 D 591020 CDS YP_005726373.1 384542311 12316897 complement(760874..762637) 1 NC_017328.1 Invasion plasmid antigen 762637 12316897 SFxv_0786 Shigella flexneri 2002017 Invasion plasmid antigen YP_005726373.1 760874 R 591020 CDS YP_005726374.1 384542312 12316898 762747..762926 1 NC_017328.1 hypothetical protein 762926 12316898 SFxv_0787 Shigella flexneri 2002017 hypothetical protein YP_005726374.1 762747 D 591020 CDS YP_005726375.1 384542313 12316899 complement(763220..763696) 1 NC_017328.1 protein ybhB 763696 ybhB 12316899 ybhB Shigella flexneri 2002017 protein ybhB YP_005726375.1 763220 R 591020 CDS YP_005726376.1 384542314 12316900 complement(763755..765155) 1 NC_017328.1 7,8-diaminopelargonic acid synthetase 765155 bioA 12316900 bioA Shigella flexneri 2002017 7,8-diaminopelargonic acid synthetase YP_005726376.1 763755 R 591020 CDS YP_005726377.1 384542315 12316901 765131..766171 1 NC_017328.1 Biotin synthesis, sulfur insertion 766171 bioB 12316901 bioB Shigella flexneri 2002017 Biotin synthesis, sulfur insertion YP_005726377.1 765131 D 591020 CDS YP_005726378.1 384542316 12316902 766168..767322 1 NC_017328.1 8-amino-7-oxononanoate synthase 767322 bioF 12316902 bioF Shigella flexneri 2002017 8-amino-7-oxononanoate synthase YP_005726378.1 766168 D 591020 CDS YP_005726379.1 384542317 12316903 767309..768064 1 NC_017328.1 biotin biosynthesis protein BioC 768064 bioC 12316903 bioC Shigella flexneri 2002017 biotin biosynthesis protein BioC YP_005726379.1 767309 D 591020 CDS YP_005726380.1 384542318 12316904 768057..768734 1 NC_017328.1 dethiobiotin synthetase 768734 bioD 12316904 bioD Shigella flexneri 2002017 dethiobiotin synthetase YP_005726380.1 768057 D 591020 CDS YP_005726381.1 384542319 12316905 complement(768901..769038) 1 NC_017328.1 hypothetical protein 769038 12316905 SFxv_0794 Shigella flexneri 2002017 hypothetical protein YP_005726381.1 768901 R 591020 CDS YP_005726382.1 384542320 12316906 769313..771334 1 NC_017328.1 UvrABC system protein B 771334 uvrB 12316906 uvrB Shigella flexneri 2002017 UvrABC system protein B YP_005726382.1 769313 D 591020 CDS YP_005726383.1 384542321 12316907 complement(771526..772434) 1 NC_017328.1 putative structural protein 772434 ybhK 12316907 ybhK Shigella flexneri 2002017 putative structural protein YP_005726383.1 771526 R 591020 CDS YP_005726384.1 384542322 12316908 772798..773820 1 NC_017328.1 Molybdenum cofactor biosynthesis protein A 773820 moaA 12316908 moaA Shigella flexneri 2002017 Molybdenum cofactor biosynthesis protein A YP_005726384.1 772798 D 591020 CDS YP_005726385.1 384542323 12316909 773842..774354 1 NC_017328.1 molybdenum cofactor biosynthesis protein MoaB 774354 moaB 12316909 moaB Shigella flexneri 2002017 molybdenum cofactor biosynthesis protein MoaB YP_005726385.1 773842 D 591020 CDS YP_005726386.1 384542324 12316910 774357..774842 1 NC_017328.1 Molybdenum cofactor biosynthesis protein C 774842 moaC 12316910 moaC Shigella flexneri 2002017 Molybdenum cofactor biosynthesis protein C YP_005726386.1 774357 D 591020 CDS YP_005726387.1 384542325 12316911 774835..775080 1 NC_017328.1 Molybdopterin biosynthesis protein D 775080 moaD 12316911 moaD Shigella flexneri 2002017 Molybdopterin biosynthesis protein D YP_005726387.1 774835 D 591020 CDS YP_005726388.1 384542326 12316912 775082..775534 1 NC_017328.1 Molybdopterin converting factor, subunit 2 775534 moaE 12316912 moaE Shigella flexneri 2002017 Molybdopterin converting factor, subunit 2 YP_005726388.1 775082 D 591020 CDS YP_005726389.1 384542327 12316914 776581..777294 1 NC_017328.1 hypothetical protein 777294 ybhM 12316914 ybhM Shigella flexneri 2002017 hypothetical protein YP_005726389.1 776581 D 591020 CDS YP_005726390.1 384542328 12316915 complement(777330..778286) 1 NC_017328.1 hypothetical protein 778286 ybhN 12316915 ybhN Shigella flexneri 2002017 hypothetical protein YP_005726390.1 777330 R 591020 CDS YP_005726391.1 384542329 12316916 complement(778286..779527) 1 NC_017328.1 putative cardiolipin synthetase ybhO 779527 ybhO 12316916 ybhO Shigella flexneri 2002017 putative cardiolipin synthetase ybhO YP_005726391.1 778286 R 591020 CDS YP_005726392.1 384542330 12316917 complement(779524..780285) 1 NC_017328.1 Metal-dependent hydrolase 780285 ybhP 12316917 ybhP Shigella flexneri 2002017 Metal-dependent hydrolase YP_005726392.1 779524 R 591020 CDS YP_005726393.1 384542331 12316918 780418..780828 1 NC_017328.1 Inner membrane protein ybhQ 780828 ybhQ 12316918 ybhQ Shigella flexneri 2002017 Inner membrane protein ybhQ YP_005726393.1 780418 D 591020 CDS YP_005726394.1 384542332 12316919 complement(780790..781896) 1 NC_017328.1 Inner membrane transport permease ybhR 781896 ybhR 12316919 ybhR Shigella flexneri 2002017 Inner membrane transport permease ybhR YP_005726394.1 780790 R 591020 CDS YP_005726395.1 384542333 12316920 complement(781907..783040) 1 NC_017328.1 putative inner membrane protein 783040 12316920 SFxv_0809 Shigella flexneri 2002017 putative inner membrane protein YP_005726395.1 781907 R 591020 CDS YP_005726396.1 384542334 12316921 complement(783033..784784) 1 NC_017328.1 putative ABC transporter ATP-binding protein 784784 12316921 SFxv_0810 Shigella flexneri 2002017 putative ABC transporter ATP-binding protein YP_005726396.1 783033 R 591020 CDS YP_005726397.1 384542335 12316923 complement(785761..786444) 1 NC_017328.1 putative HTH-type transcriptional regulator ybiH 786444 12316923 SFxv_0812 Shigella flexneri 2002017 putative HTH-type transcriptional regulator ybiH YP_005726397.1 785761 R 591020 CDS YP_005726398.1 384542336 12317005 786661..787881 1 NC_017328.1 putative ATP-dependent RNA helicase 787881 rhlE 12317005 rhlE Shigella flexneri 2002017 putative ATP-dependent RNA helicase YP_005726398.1 786661 D 591020 CDS YP_005726399.1 384542337 12317006 complement(788055..788537) 1 NC_017328.1 Swarming motility protein ybiA 788537 ybiA 12317006 ybiA Shigella flexneri 2002017 Swarming motility protein ybiA YP_005726399.1 788055 R 591020 CDS YP_005726400.1 384542338 12317007 788522..790807 1 NC_017328.1 Probably ATP-dependent helicase 790807 dinG 12317007 dinG Shigella flexneri 2002017 Probably ATP-dependent helicase YP_005726400.1 788522 D 591020 CDS YP_005726401.1 384542339 12317008 790835..791797 1 NC_017328.1 hypothetical protein 791797 12317008 SFxv_0816 Shigella flexneri 2002017 hypothetical protein YP_005726401.1 790835 D 591020 CDS YP_005726402.1 384542340 12317009 791938..793023 1 NC_017328.1 putative dehydrogenase 793023 ybiC 12317009 ybiC Shigella flexneri 2002017 putative dehydrogenase YP_005726402.1 791938 D 591020 CDS YP_005726403.1 384542341 12317010 complement(793252..793512) 1 NC_017328.1 hypothetical protein 793512 ybiJ 12317010 ybiJ Shigella flexneri 2002017 hypothetical protein YP_005726403.1 793252 R 591020 CDS YP_005726404.1 384542342 12317011 complement(793777..794043) 1 NC_017328.1 hypothetical protein 794043 ybiI 12317011 ybiI Shigella flexneri 2002017 hypothetical protein YP_005726404.1 793777 R 591020 CDS YP_005726405.1 384542343 12317012 complement(794117..794794) 1 NC_017328.1 PKHD-type hydroxylase ybiX 794794 ybiX 12317012 ybiX Shigella flexneri 2002017 PKHD-type hydroxylase ybiX YP_005726405.1 794117 R 591020 CDS YP_005726406.1 384542344 12317014 796892..798238 1 NC_017328.1 IS4 ORF 798238 12317014 SFxv_0823 Shigella flexneri 2002017 IS4 ORF YP_005726406.1 796892 D 591020 CDS YP_005726407.1 384542345 12317015 complement(798227..798556) 1 NC_017328.1 putative Outer membrane receptor for monomeric catechols 798556 fiu-2 12317015 fiu-2 Shigella flexneri 2002017 putative Outer membrane receptor for monomeric catechols YP_005726407.1 798227 R 591020 CDS YP_005726408.1 384542346 12317016 complement(798821..799225) 1 NC_017328.1 hypothetical protein 799225 12317016 SFxv_0825 Shigella flexneri 2002017 hypothetical protein YP_005726408.1 798821 R 591020 CDS YP_005726409.1 384542347 12317017 799276..800283 1 NC_017328.1 putative methyltransferase ybiN 800283 rlmF 12317017 rlmF Shigella flexneri 2002017 putative methyltransferase ybiN YP_005726409.1 799276 D 591020 CDS YP_005726410.1 384542348 12317018 complement(800280..802343) 1 NC_017328.1 Transporter, small conductance mechanosensitive ion channel (MscS) family 802343 ybiO 12317018 ybiO Shigella flexneri 2002017 Transporter, small conductance mechanosensitive ion channel (MscS) family YP_005726410.1 800280 R 591020 CDS YP_005726411.1 384542349 12317019 complement(802765..803487) 1 NC_017328.1 ATP-binding component of glutamine high-affinity transport system 803487 glnQ 12317019 glnQ Shigella flexneri 2002017 ATP-binding component of glutamine high-affinity transport system YP_005726411.1 802765 R 591020 CDS YP_005726412.1 384542350 12317020 complement(803484..804143) 1 NC_017328.1 Glutamine transport system permease protein glnP 804143 glnP 12317020 glnP Shigella flexneri 2002017 Glutamine transport system permease protein glnP YP_005726412.1 803484 R 591020 CDS YP_005726413.1 384542351 12317021 complement(804282..805028) 1 NC_017328.1 Periplasmic glutamine-binding protein; permease 805028 glnH 12317021 glnH Shigella flexneri 2002017 Periplasmic glutamine-binding protein; permease YP_005726413.1 804282 R 591020 CDS YP_005726414.1 384542352 12317022 complement(805432..806058) 1 NC_017328.1 Global regulator, starvation conditions 806058 dps 12317022 dps Shigella flexneri 2002017 Global regulator, starvation conditions YP_005726414.1 805432 R 591020 CDS YP_005726415.1 384542353 12317023 complement(806234..807121) 1 NC_017328.1 Threonine/homoserine efflux transporter RhtA 807121 rhtA 12317023 rhtA Shigella flexneri 2002017 Threonine/homoserine efflux transporter RhtA YP_005726415.1 806234 R 591020 CDS YP_005726416.1 384542354 12317024 807474..807989 1 NC_017328.1 Outer membrane protein X precursor 807989 ompX 12317024 ompX Shigella flexneri 2002017 Outer membrane protein X precursor YP_005726416.1 807474 D 591020 CDS YP_005726417.1 384542355 12317025 808395..808898 1 NC_017328.1 Insertion element IS1 4 protein insB 808898 12317025 SFxv_0834 Shigella flexneri 2002017 Insertion element IS1 4 protein insB YP_005726417.1 808395 D 591020 CDS YP_005726418.1 384542356 12317026 complement(808909..810396) 1 NC_017328.1 hypothetical protein 810396 12317026 SFxv_0835 Shigella flexneri 2002017 hypothetical protein YP_005726418.1 808909 R 591020 CDS YP_005726419.1 384542357 12317028 810982..811449 1 NC_017328.1 putative toxin 811449 mntR 12317028 mntR Shigella flexneri 2002017 putative toxin YP_005726419.1 810982 D 591020 CDS YP_005726420.1 384542358 12317029 811530..812564 1 NC_017328.1 Inner membrane protein ybiR 812564 ybiR 12317029 ybiR Shigella flexneri 2002017 Inner membrane protein ybiR YP_005726420.1 811530 D 591020 CDS YP_005726421.1 384542359 12317030 complement(812622..813542) 1 NC_017328.1 hypothetical protein 813542 12317030 SFxv_0839 Shigella flexneri 2002017 hypothetical protein YP_005726421.1 812622 R 591020 CDS YP_005726422.1 384542360 12317031 813761..815353 1 NC_017328.1 ATPase 815353 ybiT 12317031 ybiT Shigella flexneri 2002017 ATPase YP_005726422.1 813761 D 591020 CDS YP_005726423.1 384542361 12317032 complement(815594..816859) 1 NC_017328.1 hypothetical protein 816859 12317032 SFxv_0841 Shigella flexneri 2002017 hypothetical protein YP_005726423.1 815594 R 591020 CDS YP_005726424.1 384542362 12317033 complement(817011..817826) 1 NC_017328.1 Sugar phosphatase supH 817826 ybiV 12317033 ybiV Shigella flexneri 2002017 Sugar phosphatase supH YP_005726424.1 817011 R 591020 CDS YP_005726425.1 384542363 12317034 complement(817972..820404) 1 NC_017328.1 putative formate acetyltransferase 820404 ybiW 12317034 ybiW Shigella flexneri 2002017 putative formate acetyltransferase YP_005726425.1 817972 R 591020 CDS YP_005726426.1 384542364 12317035 complement(820410..821336) 1 NC_017328.1 putative pyruvate formate-lyase 2 activating enzyme 821336 ybiY 12317035 ybiY Shigella flexneri 2002017 putative pyruvate formate-lyase 2 activating enzyme YP_005726426.1 820410 R 591020 CDS YP_005726427.1 384542365 12317036 821368..822102 1 NC_017328.1 putative transaldolase 822102 fsaA 12317036 fsaA Shigella flexneri 2002017 putative transaldolase YP_005726427.1 821368 D 591020 CDS YP_005726428.1 384542366 12317037 complement(822281..823030) 1 NC_017328.1 putative Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis 823030 moeB 12317037 moeB Shigella flexneri 2002017 putative Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis YP_005726428.1 822281 R 591020 CDS YP_005726429.1 384542367 12317038 complement(823030..824265) 1 NC_017328.1 Molybdopterin biosynthesis MoeA protein 824265 moeA 12317038 moeA Shigella flexneri 2002017 Molybdopterin biosynthesis MoeA protein YP_005726429.1 823030 R 591020 CDS YP_005726430.1 384542368 12317039 824469..825434 1 NC_017328.1 putative asparaginase 825434 iaaA 12317039 iaaA Shigella flexneri 2002017 putative asparaginase YP_005726430.1 824469 D 591020 CDS YP_005726431.1 384542369 12317040 825421..827292 1 NC_017328.1 Glutathione import ATP-binding protein gsiA 827292 gsiA 12317040 gsiA Shigella flexneri 2002017 Glutathione import ATP-binding protein gsiA YP_005726431.1 825421 D 591020 CDS YP_005726432.1 384542370 12317041 827312..828850 1 NC_017328.1 glutathione-binding protein gsiB 828850 gsiB 12317041 gsiB Shigella flexneri 2002017 glutathione-binding protein gsiB YP_005726432.1 827312 D 591020 CDS YP_005726433.1 384542371 12317042 828868..829788 1 NC_017328.1 Glutathione transport system permease protein gsiC 829788 gsiC 12317042 gsiC Shigella flexneri 2002017 Glutathione transport system permease protein gsiC YP_005726433.1 828868 D 591020 CDS YP_005726434.1 384542372 12317043 829791..830702 1 NC_017328.1 Glutathione transport system permease protein gsiD 830702 gsiD 12317043 gsiD Shigella flexneri 2002017 Glutathione transport system permease protein gsiD YP_005726434.1 829791 D 591020 CDS YP_005726435.1 384542373 12317045 833230..834558 1 NC_017328.1 putative membrane protein yliF 834558 yliF 12317045 yliF Shigella flexneri 2002017 putative membrane protein yliF YP_005726435.1 833230 D 591020 CDS YP_005726436.1 384542374 12317046 complement(834605..835930) 1 NC_017328.1 protein yliG 835930 yliG 12317046 yliG Shigella flexneri 2002017 protein yliG YP_005726436.1 834605 R 591020 CDS YP_005726437.1 384542375 12317047 836143..836526 1 NC_017328.1 Biofilm regulator bssR 836526 bssR 12317047 bssR Shigella flexneri 2002017 Biofilm regulator bssR YP_005726437.1 836143 D 591020 CDS YP_005726438.1 384542376 12317048 836637..837575 1 NC_017328.1 aldose sugar dehydrogenase 837575 yliI 12317048 yliI Shigella flexneri 2002017 aldose sugar dehydrogenase YP_005726438.1 836637 D 591020 CDS YP_005726439.1 384542377 12317049 complement(837748..838326) 1 NC_017328.1 putative Glutathione S-transferase 838326 yliJ 12317049 yliJ Shigella flexneri 2002017 putative Glutathione S-transferase YP_005726439.1 837748 R 591020 CDS YP_005726440.1 384542378 12317051 complement(841134..841892) 1 NC_017328.1 Deoxyribose operon repressor 841892 deoR 12317051 deoR Shigella flexneri 2002017 Deoxyribose operon repressor YP_005726440.1 841134 R 591020 CDS YP_005726441.1 384542379 12317052 complement(841950..842561) 1 NC_017328.1 putative undecaprenyl-diphosphatase ybjG 842561 ybjG 12317052 ybjG Shigella flexneri 2002017 putative undecaprenyl-diphosphatase ybjG YP_005726441.1 841950 R 591020 CDS YP_005726442.1 384542380 12317053 842831..844057 1 NC_017328.1 Chloramphenicol resistance pump Cmr 844057 cmr 12317053 cmr Shigella flexneri 2002017 Chloramphenicol resistance pump Cmr YP_005726442.1 842831 D 591020 CDS YP_005726443.1 384542381 12317054 complement(844098..844382) 1 NC_017328.1 hypothetical protein 844382 12317054 SFxv_0865 Shigella flexneri 2002017 hypothetical protein YP_005726443.1 844098 R 591020 CDS YP_005726444.1 384542382 12317055 complement(844468..845283) 1 NC_017328.1 cof family hydrolase 845283 12317055 SFxv_0866 Shigella flexneri 2002017 cof family hydrolase YP_005726444.1 844468 R 591020 CDS YP_005726445.1 384542383 12317056 complement(845283..846491) 1 NC_017328.1 putative DEOR-type transcriptional regulator 846491 12317056 SFxv_0867 Shigella flexneri 2002017 putative DEOR-type transcriptional regulator YP_005726445.1 845283 R 591020 CDS YP_005726446.1 384542384 12317057 846575..847111 1 NC_017328.1 TetR family transcriptional regulator 847111 12317057 SFxv_0868 Shigella flexneri 2002017 TetR family transcriptional regulator YP_005726446.1 846575 D 591020 CDS YP_005726447.1 384542385 12317058 complement(847286..848971) 1 NC_017328.1 putative transport protein 848971 12317058 SFxv_0869 Shigella flexneri 2002017 putative transport protein YP_005726447.1 847286 R 591020 CDS YP_005726448.1 384542386 12317059 849241..849618 1 NC_017328.1 putative inner membrane protein 849618 12317059 SFxv_0870 Shigella flexneri 2002017 putative inner membrane protein YP_005726448.1 849241 D 591020 CDS YP_005726449.1 384542387 12317060 complement(849648..849905) 1 NC_017328.1 Glutaredoxin-1 849905 grxA 12317060 grxA Shigella flexneri 2002017 Glutaredoxin-1 YP_005726449.1 849648 R 591020 CDS YP_005726450.1 384542388 12317061 850065..850352 1 NC_017328.1 putative inner membrane protein 850352 12317061 SFxv_0872 Shigella flexneri 2002017 putative inner membrane protein YP_005726450.1 850065 D 591020 CDS YP_005726451.1 384542389 12317062 850336..851058 1 NC_017328.1 Modulator of drug activity A 851058 nfsA 12317062 nfsA Shigella flexneri 2002017 Modulator of drug activity A YP_005726451.1 850336 D 591020 CDS YP_005726452.1 384542390 12317063 851119..852021 1 NC_017328.1 Ribosomal protein S6 modification protein 852021 rimK 12317063 rimK Shigella flexneri 2002017 Ribosomal protein S6 modification protein YP_005726452.1 851119 D 591020 CDS YP_005726453.1 384542391 12317064 852097..852585 1 NC_017328.1 putative sensory transduction regulator 852585 ybjN 12317064 ybjN Shigella flexneri 2002017 putative sensory transduction regulator YP_005726453.1 852097 D 591020 CDS YP_005726454.1 384542392 12317065 852862..854049 1 NC_017328.1 Putrescine-binding periplasmic protein 854049 potF 12317065 potF Shigella flexneri 2002017 Putrescine-binding periplasmic protein YP_005726454.1 852862 D 591020 CDS YP_005726455.1 384542393 12317066 854144..855277 1 NC_017328.1 putative ABC-type spermidine/putrescine transport systems, ATPase components 855277 potG 12317066 potG Shigella flexneri 2002017 putative ABC-type spermidine/putrescine transport systems, ATPase components YP_005726455.1 854144 D 591020 CDS YP_005726456.1 384542394 12317067 855287..856240 1 NC_017328.1 Putrescine transport protein 856240 potH 12317067 potH Shigella flexneri 2002017 Putrescine transport protein YP_005726456.1 855287 D 591020 CDS YP_005726457.1 384542395 12317068 856237..857082 1 NC_017328.1 Putrescine transport protein 857082 potI 12317068 potI Shigella flexneri 2002017 Putrescine transport protein YP_005726457.1 856237 D 591020 CDS YP_005726458.1 384542396 12317069 857142..857630 1 NC_017328.1 inner membrane protein ybjO 857630 ybjO 12317069 ybjO Shigella flexneri 2002017 inner membrane protein ybjO YP_005726458.1 857142 D 591020 CDS YP_005726459.1 384542397 12317070 857671..858798 1 NC_017328.1 23S rRNA (uracil-5-)-methyltransferase 858798 rumB 12317070 rumB Shigella flexneri 2002017 23S rRNA (uracil-5-)-methyltransferase YP_005726459.1 857671 D 591020 CDS YP_005726460.1 384542398 12317071 complement(858973..859704) 1 NC_017328.1 Arginine 3rd transport system periplasmic binding protein 859704 artJ 12317071 artJ Shigella flexneri 2002017 Arginine 3rd transport system periplasmic binding protein YP_005726460.1 858973 R 591020 CDS YP_005726461.1 384542399 12317072 complement(859996..860664) 1 NC_017328.1 Arginine 3rd transport system permease protein 860664 artM 12317072 artM Shigella flexneri 2002017 Arginine 3rd transport system permease protein YP_005726461.1 859996 R 591020 CDS YP_005726462.1 384542400 12317073 complement(860664..861380) 1 NC_017328.1 Arginine 3rd transport system permease protein 861380 artQ 12317073 artQ Shigella flexneri 2002017 Arginine 3rd transport system permease protein YP_005726462.1 860664 R 591020 CDS YP_005726463.1 384542401 12317074 complement(861387..862118) 1 NC_017328.1 Arginine 3rd transport system periplasmic binding protein 862118 artI 12317074 artI Shigella flexneri 2002017 Arginine 3rd transport system periplasmic binding protein YP_005726463.1 861387 R 591020 CDS YP_005726464.1 384542402 12317075 complement(862136..862864) 1 NC_017328.1 Arginine transport ATP-binding protein ArtP 862864 artP 12317075 artP Shigella flexneri 2002017 Arginine transport ATP-binding protein ArtP YP_005726464.1 862136 R 591020 CDS YP_005726465.1 384542403 12317076 complement(863082..863597) 1 NC_017328.1 putative lipoprotein YbjP 863597 ybjP 12317076 ybjP Shigella flexneri 2002017 putative lipoprotein YbjP YP_005726465.1 863082 R 591020 CDS YP_005726466.1 384542404 12317077 complement(863611..863793) 1 NC_017328.1 hypothetical protein 863793 12317077 SFxv_0888 Shigella flexneri 2002017 hypothetical protein YP_005726466.1 863611 R 591020 CDS YP_005726467.1 384542405 12317078 864213..866015 1 NC_017328.1 hypothetical protein 866015 12317078 SFxv_0889 Shigella flexneri 2002017 hypothetical protein YP_005726467.1 864213 D 591020 CDS YP_005726468.1 384542406 12317079 866226..866549 1 NC_017328.1 protein ybjQ 866549 ybjQ 12317079 ybjQ Shigella flexneri 2002017 protein ybjQ YP_005726468.1 866226 D 591020 CDS YP_005726469.1 384542407 12317080 866546..867376 1 NC_017328.1 putative regulator 867376 amiD 12317080 amiD Shigella flexneri 2002017 putative regulator YP_005726469.1 866546 D 591020 CDS YP_005726470.1 384542408 12317081 complement(867373..868422) 1 NC_017328.1 putative nucleotide di-P-sugar epimerase or dehydratase 868422 ybjS 12317081 ybjS Shigella flexneri 2002017 putative nucleotide di-P-sugar epimerase or dehydratase YP_005726470.1 867373 R 591020 CDS YP_005726471.1 384542409 12317082 complement(868485..869915) 1 NC_017328.1 putative dTDP-glucose enzyme 869915 ybjT 12317082 ybjT Shigella flexneri 2002017 putative dTDP-glucose enzyme YP_005726471.1 868485 R 591020 CDS YP_005726472.1 384542410 12317083 complement(869926..870927) 1 NC_017328.1 putative arylsulfatase 870927 ltaE 12317083 ltaE Shigella flexneri 2002017 putative arylsulfatase YP_005726472.1 869926 R 591020 CDS YP_005726473.1 384542411 12317084 complement(870964..872682) 1 NC_017328.1 Pyruvate oxidase 872682 poxB 12317084 poxB Shigella flexneri 2002017 Pyruvate oxidase YP_005726473.1 870964 R 591020 CDS YP_005726474.1 384542412 12317085 complement(872815..873783) 1 NC_017328.1 hypothetical protein 873783 12317085 SFxv_0896 Shigella flexneri 2002017 hypothetical protein YP_005726474.1 872815 R 591020 CDS YP_005726475.1 384542413 12317167 complement(873795..875447) 1 NC_017328.1 hydroxylamine reductase 875447 hcp 12317167 hcp Shigella flexneri 2002017 hydroxylamine reductase YP_005726475.1 873795 R 591020 CDS YP_005726476.1 384542414 12317168 complement(875591..876538) 1 NC_017328.1 putative surface protein 876538 ybjE 12317168 ybjE Shigella flexneri 2002017 putative surface protein YP_005726476.1 875591 R 591020 CDS YP_005726477.1 384542415 12317169 complement(876614..877519) 1 NC_017328.1 Transposase insD for insertion element IS2A/D/F/H/I/K 877519 12317169 SFxv_0901 Shigella flexneri 2002017 Transposase insD for insertion element IS2A/D/F/H/I/K YP_005726477.1 876614 R 591020 CDS YP_005726478.1 384542416 12317170 877043..877474 1 NC_017328.1 Insertion element IS2 protein 877474 12317170 SFxv_0899 Shigella flexneri 2002017 Insertion element IS2 protein YP_005726478.1 877043 D 591020 CDS YP_005726479.1 384542417 12317171 complement(877477..877842) 1 NC_017328.1 IS2 ORF1 877842 12317171 SFxv_0902 Shigella flexneri 2002017 IS2 ORF1 YP_005726479.1 877477 R 591020 CDS YP_005726480.1 384542418 12317172 complement(878283..878978) 1 NC_017328.1 aquaporin 878978 aqpZ 12317172 aqpZ Shigella flexneri 2002017 aquaporin YP_005726480.1 878283 R 591020 CDS YP_005726481.1 384542419 12317174 879613..879816 1 NC_017328.1 putative IS1 encoded protein 879816 12317174 SFxv_0904 Shigella flexneri 2002017 putative IS1 encoded protein YP_005726481.1 879613 D 591020 CDS YP_005726482.1 384542420 12317175 880145..881803 1 NC_017328.1 putative OLD family ATP-dependent endonuclease 881803 ybjD 12317175 ybjD Shigella flexneri 2002017 putative OLD family ATP-dependent endonuclease YP_005726482.1 880145 D 591020 CDS YP_005726483.1 384542421 12317176 complement(881800..882792) 1 NC_017328.1 hypothetical protein 882792 12317176 SFxv_0907 Shigella flexneri 2002017 hypothetical protein YP_005726483.1 881800 R 591020 CDS YP_005726484.1 384542422 12317177 882907..884022 1 NC_017328.1 Macrolide-specific efflux protein macA 884022 macA 12317177 macA Shigella flexneri 2002017 Macrolide-specific efflux protein macA YP_005726484.1 882907 D 591020 CDS YP_005726485.1 384542423 12317178 884019..885965 1 NC_017328.1 Macrolide export ATP-binding/permease protein macB 885965 macB 12317178 macB Shigella flexneri 2002017 Macrolide export ATP-binding/permease protein macB YP_005726485.1 884019 D 591020 CDS YP_005726486.1 384542424 12317179 complement(886038..886292) 1 NC_017328.1 putative Cold shock protein 886292 cspD 12317179 cspD Shigella flexneri 2002017 putative Cold shock protein YP_005726486.1 886038 R 591020 CDS YP_005726487.1 384542425 12317180 886585..886905 1 NC_017328.1 ATP-dependent Clp protease adapter protein clpS 886905 clpS 12317180 clpS Shigella flexneri 2002017 ATP-dependent Clp protease adapter protein clpS YP_005726487.1 886585 D 591020 CDS YP_005726488.1 384542426 12317181 886936..889212 1 NC_017328.1 ATP-binding component of serine protease 889212 clpA 12317181 clpA Shigella flexneri 2002017 ATP-binding component of serine protease YP_005726488.1 886936 D 591020 CDS YP_005726489.1 384542427 12317183 complement(889956..890174) 1 NC_017328.1 translation initiation factor IF-1 890174 infA 12317183 infA Shigella flexneri 2002017 translation initiation factor IF-1 YP_005726489.1 889956 R 591020 CDS YP_005726490.1 384542428 12317184 complement(890459..891163) 1 NC_017328.1 leucyl/phenylalanyl-tRNA--protein transferase 891163 aat 12317184 aat Shigella flexneri 2002017 leucyl/phenylalanyl-tRNA--protein transferase YP_005726490.1 890459 R 591020 CDS YP_005726491.1 384542429 12317185 complement(891205..892926) 1 NC_017328.1 ATP-binding protein 892926 cydC 12317185 cydC Shigella flexneri 2002017 ATP-binding protein YP_005726491.1 891205 R 591020 CDS YP_005726492.1 384542430 12317186 complement(892927..894693) 1 NC_017328.1 ATP-binding protein 894693 cydD 12317186 cydD Shigella flexneri 2002017 ATP-binding protein YP_005726492.1 892927 R 591020 CDS YP_005726493.1 384542431 12317187 complement(894816..895781) 1 NC_017328.1 Thioredoxin reductase 895781 trxB 12317187 trxB Shigella flexneri 2002017 Thioredoxin reductase YP_005726493.1 894816 R 591020 CDS YP_005726494.1 384542432 12317188 896325..896819 1 NC_017328.1 Leucine-responsive regulatory protein 896819 lrp 12317188 lrp Shigella flexneri 2002017 Leucine-responsive regulatory protein YP_005726494.1 896325 D 591020 CDS YP_005726495.1 384542433 12317189 896954..900982 1 NC_017328.1 putative DNA segregation ATPase FtsK/SpoIIIE-like protein 900982 ftsK 12317189 ftsK Shigella flexneri 2002017 putative DNA segregation ATPase FtsK/SpoIIIE-like protein YP_005726495.1 896954 D 591020 CDS YP_005726496.1 384542434 12317190 901269..901748 1 NC_017328.1 Outer-membrane lipoprotein carrier protein precursor 901748 lolA 12317190 lolA Shigella flexneri 2002017 Outer-membrane lipoprotein carrier protein precursor YP_005726496.1 901269 D 591020 CDS YP_005726497.1 384542435 12317191 901759..903102 1 NC_017328.1 putative polynucleotide enzyme 903102 rarA 12317191 rarA Shigella flexneri 2002017 putative polynucleotide enzyme YP_005726497.1 901759 D 591020 CDS YP_005726498.1 384542436 12317192 903193..904485 1 NC_017328.1 seryl-tRNA synthetase 904485 serS 12317192 serS Shigella flexneri 2002017 seryl-tRNA synthetase YP_005726498.1 903193 D 591020 CDS YP_005726499.1 384542437 12317193 905051..907168 1 NC_017328.1 Anaerobic dimethyl sulfoxide reductase subunit A 907168 dmsA 12317193 dmsA Shigella flexneri 2002017 Anaerobic dimethyl sulfoxide reductase subunit A YP_005726499.1 905051 D 591020 CDS YP_005726500.1 384542438 12317194 907179..907796 1 NC_017328.1 Anaerobic dimethyl sulfoxide reductase chain B 907796 dmsB 12317194 dmsB Shigella flexneri 2002017 Anaerobic dimethyl sulfoxide reductase chain B YP_005726500.1 907179 D 591020 CDS YP_005726501.1 384542439 12317195 907798..908589 1 NC_017328.1 Anaerobic dimethyl sulfoxide reductase subunit C 908589 dmsC 12317195 dmsC Shigella flexneri 2002017 Anaerobic dimethyl sulfoxide reductase subunit C YP_005726501.1 907798 D 591020 CDS YP_005726502.1 384542440 12317196 complement(908625..909251) 1 NC_017328.1 Protein ycaC 909251 ycaC 12317196 ycaC Shigella flexneri 2002017 Protein ycaC YP_005726502.1 908625 R 591020 CDS YP_005726503.1 384542441 12317197 complement(909407..909535) 1 NC_017328.1 hypothetical protein 909535 12317197 SFxv_0927 Shigella flexneri 2002017 hypothetical protein YP_005726503.1 909407 R 591020 CDS YP_005726504.1 384542442 12317198 909566..910714 1 NC_017328.1 putative MFS-type transporter 910714 12317198 SFxv_0928 Shigella flexneri 2002017 putative MFS-type transporter YP_005726504.1 909566 D 591020 CDS YP_005726505.1 384542443 12317199 911027..911704 1 NC_017328.1 ISSfl3 orfA 911704 12317199 SFxv_0929 Shigella flexneri 2002017 ISSfl3 orfA YP_005726505.1 911027 D 591020 CDS YP_005726506.1 384542444 12317200 911698..912048 1 NC_017328.1 ISSfl3 orfB 912048 12317200 SFxv_0930 Shigella flexneri 2002017 ISSfl3 orfB YP_005726506.1 911698 D 591020 CDS YP_005726507.1 384542445 12317202 913682..913948 1 NC_017328.1 insertion element IS2 transposase InsD 913948 12317202 SFxv_0932 Shigella flexneri 2002017 insertion element IS2 transposase InsD YP_005726507.1 913682 D 591020 CDS YP_005726508.1 384542446 12317203 913933..914181 1 NC_017328.1 Endopeptidase 914181 12317203 SFxv_0933 Shigella flexneri 2002017 Endopeptidase YP_005726508.1 913933 D 591020 CDS YP_005726509.1 384542447 12317204 complement(914187..915026) 1 NC_017328.1 IS911 orfA 915026 12317204 SFxv_0934 Shigella flexneri 2002017 IS911 orfA YP_005726509.1 914187 R 591020 CDS YP_005726510.1 384542448 12317205 complement(915638..915793) 1 NC_017328.1 MokW protein 915793 12317205 SFxv_0935 Shigella flexneri 2002017 MokW protein YP_005726510.1 915638 R 591020 CDS YP_005726511.1 384542449 12317206 complement(916021..916707) 1 NC_017328.1 hypothetical protein 916707 12317206 SFxv_0936 Shigella flexneri 2002017 hypothetical protein YP_005726511.1 916021 R 591020 CDS YP_005726512.1 384542450 12317207 complement(916855..917268) 1 NC_017328.1 putative bacteriophage protein 917268 12317207 SFxv_0938 Shigella flexneri 2002017 putative bacteriophage protein YP_005726512.1 916855 R 591020 CDS YP_005726513.1 384542451 12317208 complement(917269..917691) 1 NC_017328.1 putative bacteriophage protein 917691 12317208 SFxv_0939 Shigella flexneri 2002017 putative bacteriophage protein YP_005726513.1 917269 R 591020 CDS YP_005726514.1 384542452 12317210 complement(918598..919236) 1 NC_017328.1 putative bacteriophage protein 919236 12317210 SFxv_0941 Shigella flexneri 2002017 putative bacteriophage protein YP_005726514.1 918598 R 591020 CDS YP_005726515.1 384542453 12317211 complement(919314..919736) 1 NC_017328.1 putative bacteriophage protein 919736 12317211 SFxv_0942 Shigella flexneri 2002017 putative bacteriophage protein YP_005726515.1 919314 R 591020 CDS YP_005726516.1 384542454 12317212 complement(919720..919947) 1 NC_017328.1 putative regulator of cell division 919947 12317212 SFxv_0943 Shigella flexneri 2002017 putative regulator of cell division YP_005726516.1 919720 R 591020 CDS YP_005726517.1 384542455 12317213 920024..920431 1 NC_017328.1 putative regulator 920431 12317213 SFxv_0944 Shigella flexneri 2002017 putative regulator YP_005726517.1 920024 D 591020 CDS YP_005726518.1 384542456 12317214 920580..920789 1 NC_017328.1 prophage protein 920789 12317214 SFxv_0945 Shigella flexneri 2002017 prophage protein YP_005726518.1 920580 D 591020 CDS YP_005726519.1 384542457 12317215 920791..920994 1 NC_017328.1 hypothetical protein 920994 12317215 SFxv_0946 Shigella flexneri 2002017 hypothetical protein YP_005726519.1 920791 D 591020 CDS YP_005726520.1 384542458 12317216 complement(921236..922141) 1 NC_017328.1 IS2 ORF2 922141 12317216 SFxv_0949 Shigella flexneri 2002017 IS2 ORF2 YP_005726520.1 921236 R 591020 CDS YP_005726521.1 384542459 12317217 921665..922096 1 NC_017328.1 Insertion element IS2 protein 922096 12317217 SFxv_0947 Shigella flexneri 2002017 Insertion element IS2 protein YP_005726521.1 921665 D 591020 CDS YP_005726522.1 384542460 12317218 complement(922099..922464) 1 NC_017328.1 IS2 ORF1 922464 12317218 SFxv_0950 Shigella flexneri 2002017 IS2 ORF1 YP_005726522.1 922099 R 591020 CDS YP_005726523.1 384542461 12317219 922904..923860 1 NC_017328.1 putative bacteriophage protein 923860 12317219 SFxv_0951 Shigella flexneri 2002017 putative bacteriophage protein YP_005726523.1 922904 D 591020 CDS YP_005726524.1 384542462 12317220 924185..924322 1 NC_017328.1 hypothetical protein 924322 12317220 SFxv_0953 Shigella flexneri 2002017 hypothetical protein YP_005726524.1 924185 D 591020 CDS YP_005726525.1 384542463 12317221 924712..925503 1 NC_017328.1 IS600 ORF2 925503 12317221 SFxv_0954 Shigella flexneri 2002017 IS600 ORF2 YP_005726525.1 924712 D 591020 CDS YP_005726526.1 384542464 12317222 complement(925528..926172) 1 NC_017328.1 putative exodeoxyribonuclease VIII 926172 12317222 SFxv_0955 Shigella flexneri 2002017 putative exodeoxyribonuclease VIII YP_005726526.1 925528 R 591020 CDS YP_005726527.1 384542465 12317223 complement(926301..926504) 1 NC_017328.1 putative bacteriophage protein 926504 12317223 SFxv_0956 Shigella flexneri 2002017 putative bacteriophage protein YP_005726527.1 926301 R 591020 CDS YP_005726528.1 384542466 12317224 complement(926516..926995) 1 NC_017328.1 IS600 ORF2 926995 12317224 SFxv_0957 Shigella flexneri 2002017 IS600 ORF2 YP_005726528.1 926516 R 591020 CDS YP_005726529.1 384542467 12317225 complement(927371..927673) 1 NC_017328.1 ISSd1, transposase orfA/B, fusion 927673 12317225 SFxv_0958 Shigella flexneri 2002017 ISSd1, transposase orfA/B, fusion YP_005726529.1 927371 R 591020 CDS YP_005726530.1 384542468 12317226 927712..928356 1 NC_017328.1 hypothetical protein 928356 12317226 SFxv_0959 Shigella flexneri 2002017 hypothetical protein YP_005726530.1 927712 D 591020 CDS YP_005726531.1 384542469 12317227 complement(928536..930362) 1 NC_017328.1 Invasion plasmid antigen 930362 12317227 SFxv_0961 Shigella flexneri 2002017 Invasion plasmid antigen YP_005726531.1 928536 R 591020 CDS YP_005726532.1 384542470 12317228 930853..930984 1 NC_017328.1 Site-specific recombinase 930984 12317228 SFxv_0962 Shigella flexneri 2002017 Site-specific recombinase YP_005726532.1 930853 D 591020 CDS YP_005726533.1 384542471 12317229 931244..932239 1 NC_017328.1 6-phosphogluconolactonase 932239 pgl 12317229 pgl Shigella flexneri 2002017 6-phosphogluconolactonase YP_005726533.1 931244 D 591020 CDS YP_005726534.1 384542472 12317231 933417..934469 1 NC_017328.1 hypothetical protein 934469 12317231 SFxv_0966 Shigella flexneri 2002017 hypothetical protein YP_005726534.1 933417 D 591020 CDS YP_005726535.1 384542473 12317232 934545..935978 1 NC_017328.1 putative Inner membrane protein 935978 12317232 SFxv_0967 Shigella flexneri 2002017 putative Inner membrane protein YP_005726535.1 934545 D 591020 CDS YP_005726536.1 384542474 12317233 936161..938341 1 NC_017328.1 Aconitase family protein 938341 12317233 SFxv_0968 Shigella flexneri 2002017 Aconitase family protein YP_005726536.1 936161 D 591020 CDS YP_005726537.1 384542475 12317234 complement(938482..939765) 1 NC_017328.1 putative pectinesterase 939765 12317234 SFxv_0969 Shigella flexneri 2002017 putative pectinesterase YP_005726537.1 938482 R 591020 CDS YP_005726538.1 384542476 12317235 complement(940882..941700) 1 NC_017328.1 IS600 ORF2 941700 12317235 SFxv_0970 Shigella flexneri 2002017 IS600 ORF2 YP_005726538.1 940882 R 591020 CDS YP_005726539.1 384542477 12317237 complement(942447..943187) 1 NC_017328.1 Pyruvate formate lyase-activating enzyme 1 943187 pflA 12317237 pflA Shigella flexneri 2002017 Pyruvate formate lyase-activating enzyme 1 YP_005726539.1 942447 R 591020 CDS YP_005726540.1 384542478 12317238 complement(943379..944572) 1 NC_017328.1 Formate acetyltransferase 1 944572 pflB 12317238 pflB Shigella flexneri 2002017 Formate acetyltransferase 1 YP_005726540.1 943379 R 591020 CDS YP_005726541.1 384542479 12317239 complement(945716..946720) 1 NC_017328.1 FocA formate FNT transporter 946720 focA 12317239 focA Shigella flexneri 2002017 FocA formate FNT transporter YP_005726541.1 945716 R 591020 CDS YP_005726542.1 384542480 12317240 complement(946980..948773) 1 NC_017328.1 protein ycaO 948773 ycaO 12317240 ycaO Shigella flexneri 2002017 protein ycaO YP_005726542.1 946980 R 591020 CDS YP_005726543.1 384542481 12317242 949695..950783 1 NC_017328.1 3-phosphoserine aminotransferase 950783 serC 12317242 serC Shigella flexneri 2002017 3-phosphoserine aminotransferase YP_005726543.1 949695 D 591020 CDS YP_005726544.1 384542482 12317243 950854..952137 1 NC_017328.1 3-phosphoshikimate 1-carboxyvinyltransferase 952137 aroA 12317243 aroA Shigella flexneri 2002017 3-phosphoshikimate 1-carboxyvinyltransferase YP_005726544.1 950854 D 591020 CDS YP_005726545.1 384542483 12317244 952263..953609 1 NC_017328.1 IS4 ORF 953609 12317244 SFxv_0979 Shigella flexneri 2002017 IS4 ORF YP_005726545.1 952263 D 591020 CDS YP_005726546.1 384542484 12317245 953721..954509 1 NC_017328.1 putative heat shock protein 954509 ycaL 12317245 ycaL Shigella flexneri 2002017 putative heat shock protein YP_005726546.1 953721 D 591020 CDS YP_005726547.1 384542485 12317246 954682..955365 1 NC_017328.1 cytidylate kinase 955365 cmk 12317246 cmk Shigella flexneri 2002017 cytidylate kinase YP_005726547.1 954682 D 591020 CDS YP_005726548.1 384542486 12317247 955476..957149 1 NC_017328.1 30S ribosomal protein S1 957149 rpsA 12317247 rpsA Shigella flexneri 2002017 30S ribosomal protein S1 YP_005726548.1 955476 D 591020 CDS YP_005726549.1 384542487 12317329 957309..957593 1 NC_017328.1 Integration host factor subunit beta 957593 ihfB 12317329 ihfB Shigella flexneri 2002017 Integration host factor subunit beta YP_005726549.1 957309 D 591020 CDS YP_005726550.1 384542488 12317331 960096..961844 1 NC_017328.1 Lipid A export ATP-binding/permease protein msbA 961844 msbA 12317331 msbA Shigella flexneri 2002017 Lipid A export ATP-binding/permease protein msbA YP_005726550.1 960096 D 591020 CDS YP_005726551.1 384542489 12317332 961841..962827 1 NC_017328.1 tetraacyldisaccharide 4'-kinase 962827 lpxK 12317332 lpxK Shigella flexneri 2002017 tetraacyldisaccharide 4'-kinase YP_005726551.1 961841 D 591020 CDS YP_005726552.1 384542490 12317333 962864..964096 1 NC_017328.1 hypothetical protein 964096 12317333 SFxv_0987 Shigella flexneri 2002017 hypothetical protein YP_005726552.1 962864 D 591020 CDS YP_005726553.1 384542491 12317334 964148..964330 1 NC_017328.1 protein ycaR 964330 ycaR 12317334 ycaR Shigella flexneri 2002017 protein ycaR YP_005726553.1 964148 D 591020 CDS YP_005726554.1 384542492 12317335 964327..965073 1 NC_017328.1 3-deoxy-manno-octulosonate cytidylyltransferase 965073 kdsB 12317335 kdsB Shigella flexneri 2002017 3-deoxy-manno-octulosonate cytidylyltransferase YP_005726554.1 964327 D 591020 CDS YP_005726555.1 384542493 12317336 965227..966120 1 NC_017328.1 hypothetical protein 966120 12317336 SFxv_0990 Shigella flexneri 2002017 hypothetical protein YP_005726555.1 965227 D 591020 CDS YP_005726556.1 384542494 12317337 complement(966097..966876) 1 NC_017328.1 hypothetical protein 966876 12317337 SFxv_0991 Shigella flexneri 2002017 hypothetical protein YP_005726556.1 966097 R 591020 CDS YP_005726557.1 384542495 12317338 967012..967797 1 NC_017328.1 S-adenosylmethionine-dependent methyltransferase 967797 smtA 12317338 smtA Shigella flexneri 2002017 S-adenosylmethionine-dependent methyltransferase YP_005726557.1 967012 D 591020 CDS YP_005726558.1 384542496 12317339 967794..969116 1 NC_017328.1 Chromosome partition protein mukF 969116 mukF 12317339 mukF Shigella flexneri 2002017 Chromosome partition protein mukF YP_005726558.1 967794 D 591020 CDS YP_005726559.1 384542497 12317340 969070..969801 1 NC_017328.1 Chromosome partition protein mukE 969801 mukE 12317340 mukE Shigella flexneri 2002017 Chromosome partition protein mukE YP_005726559.1 969070 D 591020 CDS YP_005726560.1 384542498 12317341 969801..974261 1 NC_017328.1 Chromosome partition protein mukB 974261 mukB 12317341 mukB Shigella flexneri 2002017 Chromosome partition protein mukB YP_005726560.1 969801 D 591020 CDS YP_005726561.1 384542499 12317342 974406..975752 1 NC_017328.1 IS4 ORF 975752 12317342 SFxv_0996 Shigella flexneri 2002017 IS4 ORF YP_005726561.1 974406 D 591020 CDS YP_005726562.1 384542500 12317343 975960..977807 1 NC_017328.1 putative amidase 977807 ycbB 12317343 ycbB Shigella flexneri 2002017 putative amidase YP_005726562.1 975960 D 591020 CDS YP_005726563.1 384542501 12317344 977979..978536 1 NC_017328.1 hypothetical protein 978536 12317344 SFxv_0998 Shigella flexneri 2002017 hypothetical protein YP_005726563.1 977979 D 591020 CDS YP_005726564.1 384542502 12317345 978563..979210 1 NC_017328.1 Beta-lactamase domain protein 979210 ycbL 12317345 ycbL Shigella flexneri 2002017 Beta-lactamase domain protein YP_005726564.1 978563 D 591020 CDS YP_005726565.1 384542503 12317346 complement(979433..980623) 1 NC_017328.1 Aspartate aminotransferase 980623 aspC 12317346 aspC Shigella flexneri 2002017 Aspartate aminotransferase YP_005726565.1 979433 R 591020 CDS YP_005726566.1 384542504 12317347 complement(980808..981896) 1 NC_017328.1 Outer membrane protein 1a 981896 ompF 12317347 ompF Shigella flexneri 2002017 Outer membrane protein 1a YP_005726566.1 980808 R 591020 CDS YP_005726567.1 384542505 12317348 complement(982497..983897) 1 NC_017328.1 Asparaginyl-tRNA synthetase 983897 asnS 12317348 asnS Shigella flexneri 2002017 Asparaginyl-tRNA synthetase YP_005726567.1 982497 R 591020 CDS YP_005726568.1 384542506 12317349 complement(984066..985316) 1 NC_017328.1 Nicotinate phosphoribosyltransferase 985316 pncB 12317349 pncB Shigella flexneri 2002017 Nicotinate phosphoribosyltransferase YP_005726568.1 984066 R 591020 CDS YP_005726569.1 384542507 12317350 985534..988149 1 NC_017328.1 Aminopeptidase N 988149 pepN 12317350 pepN Shigella flexneri 2002017 Aminopeptidase N YP_005726569.1 985534 D 591020 CDS YP_005726570.1 384542508 12317351 complement(988356..989123) 1 NC_017328.1 Aliphatic sulfonates import ATP-binding protein ssuB 989123 ssuB 12317351 ssuB Shigella flexneri 2002017 Aliphatic sulfonates import ATP-binding protein ssuB YP_005726570.1 988356 R 591020 CDS YP_005726571.1 384542509 12317353 complement(990611..990976) 1 NC_017328.1 IS2 ORF1 990976 12317353 SFxv_1010 Shigella flexneri 2002017 IS2 ORF1 YP_005726571.1 990611 R 591020 CDS YP_005726572.1 384542510 12317354 complement(991259..992404) 1 NC_017328.1 Alkanesulfonate monooxygenase 992404 ssuD 12317354 ssuD Shigella flexneri 2002017 Alkanesulfonate monooxygenase YP_005726572.1 991259 R 591020 CDS YP_005726573.1 384542511 12317355 complement(992401..993402) 1 NC_017328.1 ABC transporter, periplasmic substrate-binding protein, aliphatic sulfonates family 993402 ssuA 12317355 ssuA Shigella flexneri 2002017 ABC transporter, periplasmic substrate-binding protein, aliphatic sulfonates family YP_005726573.1 992401 R 591020 CDS YP_005726574.1 384542512 12317356 complement(993353..993928) 1 NC_017328.1 NAD(P)H-dependent FMN reductase 993928 ssuE 12317356 ssuE Shigella flexneri 2002017 NAD(P)H-dependent FMN reductase YP_005726574.1 993353 R 591020 CDS YP_005726575.1 384542513 12317357 complement(993847..994185) 1 NC_017328.1 putative IS1 encoded protein 994185 12317357 SFxv_1015 Shigella flexneri 2002017 putative IS1 encoded protein YP_005726575.1 993847 R 591020 CDS YP_005726576.1 384542514 12317358 994511..994729 1 NC_017328.1 IS1 transposase 994729 12317358 SFxv_1016 Shigella flexneri 2002017 IS1 transposase YP_005726576.1 994511 D 591020 CDS YP_005726577.1 384542515 12317359 994810..995106 1 NC_017328.1 putative fimbrial-like protein 995106 12317359 SFxv_1017 Shigella flexneri 2002017 putative fimbrial-like protein YP_005726577.1 994810 D 591020 CDS YP_005726578.1 384542516 12317360 complement(995100..995603) 1 NC_017328.1 IS1 orfB 995603 12317360 SFxv_1018 Shigella flexneri 2002017 IS1 orfB YP_005726578.1 995100 R 591020 CDS YP_005726579.1 384542517 12317361 995717..995872 1 NC_017328.1 IS600 ORF2 995872 12317361 SFxv_1019 Shigella flexneri 2002017 IS600 ORF2 YP_005726579.1 995717 D 591020 CDS YP_005726580.1 384542518 12317362 995937..998537 1 NC_017328.1 putative outer membrane protein 998537 ycbS 12317362 ycbS Shigella flexneri 2002017 putative outer membrane protein YP_005726580.1 995937 D 591020 CDS YP_005726581.1 384542519 12317363 998528..999511 1 NC_017328.1 FimH protein 999511 ycbT 12317363 ycbT Shigella flexneri 2002017 FimH protein YP_005726581.1 998528 D 591020 CDS YP_005726582.1 384542520 12317365 1000109..1000672 1 NC_017328.1 putative fimbrial-like protein 1000672 ycbV 12317365 ycbV Shigella flexneri 2002017 putative fimbrial-like protein YP_005726582.1 1000109 D 591020 CDS YP_005726583.1 384542521 12317366 1000638..1001375 1 NC_017328.1 putative chaperone 1001375 ycbF 12317366 ycbF Shigella flexneri 2002017 putative chaperone YP_005726583.1 1000638 D 591020 CDS YP_005726584.1 384542522 12317367 1001486..1002496 1 NC_017328.1 Dihydroorotate dehydrogenase 1002496 pyrD 12317367 pyrD Shigella flexneri 2002017 Dihydroorotate dehydrogenase YP_005726584.1 1001486 D 591020 CDS YP_005726585.1 384542523 12317368 1002634..1003212 1 NC_017328.1 hypothetical protein 1003212 12317368 SFxv_1026 Shigella flexneri 2002017 hypothetical protein YP_005726585.1 1002634 D 591020 CDS YP_005726586.1 384542524 12317369 complement(1003209..1004318) 1 NC_017328.1 MOSC domain-containing protein 1004318 ycbX 12317369 ycbX Shigella flexneri 2002017 MOSC domain-containing protein YP_005726586.1 1003209 R 591020 CDS YP_005726587.1 384542525 12317370 1004562..1006670 1 NC_017328.1 putative oxidoreductase 1006670 rlmL 12317370 rlmL Shigella flexneri 2002017 putative oxidoreductase YP_005726587.1 1004562 D 591020 CDS YP_005726588.1 384542526 12317371 1006682..1008589 1 NC_017328.1 ATPase 1008589 uup 12317371 uup Shigella flexneri 2002017 ATPase YP_005726588.1 1006682 D 591020 CDS YP_005726589.1 384542527 12317372 1008719..1009972 1 NC_017328.1 Paraquat-inducible protein A 1009972 pqiA 12317372 pqiA Shigella flexneri 2002017 Paraquat-inducible protein A YP_005726589.1 1008719 D 591020 CDS YP_005726590.1 384542528 12317373 1009977..1011617 1 NC_017328.1 Paraquat-inducible protein B 1011617 pqiB 12317373 pqiB Shigella flexneri 2002017 Paraquat-inducible protein B YP_005726590.1 1009977 D 591020 CDS YP_005726591.1 384542529 12317374 1011614..1012177 1 NC_017328.1 putative lipoprotein 1012177 ymbA 12317374 ymbA Shigella flexneri 2002017 putative lipoprotein YP_005726591.1 1011614 D 591020 CDS YP_005726592.1 384542530 12317375 1012433..1012600 1 NC_017328.1 Ribosome modulation factor 1012600 rmf 12317375 rmf Shigella flexneri 2002017 Ribosome modulation factor YP_005726592.1 1012433 D 591020 CDS YP_005726593.1 384542531 12317376 complement(1012670..1013296) 1 NC_017328.1 3-hydroxydecanoyl-ACP dehydratase 1013296 fabA 12317376 fabA Shigella flexneri 2002017 3-hydroxydecanoyl-ACP dehydratase YP_005726593.1 1012670 R 591020 CDS YP_005726594.1 384542532 12317377 complement(1013257..1015017) 1 NC_017328.1 putative ATP-dependent protease 1015017 ycbZ 12317377 ycbZ Shigella flexneri 2002017 putative ATP-dependent protease YP_005726594.1 1013257 R 591020 CDS YP_005726595.1 384542533 12317378 1015202..1015654 1 NC_017328.1 hypothetical protein 1015654 12317378 SFxv_1036 Shigella flexneri 2002017 hypothetical protein YP_005726595.1 1015202 D 591020 CDS YP_005726596.1 384542534 12317379 complement(1015730..1016800) 1 NC_017328.1 Outer membrane protein A 1016800 ompA 12317379 ompA Shigella flexneri 2002017 Outer membrane protein A YP_005726596.1 1015730 R 591020 CDS YP_005726597.1 384542535 12317380 complement(1017132..1017641) 1 NC_017328.1 Inhibitor of cell division and ftsZ ring formation 1017641 sulA 12317380 sulA Shigella flexneri 2002017 Inhibitor of cell division and ftsZ ring formation YP_005726597.1 1017132 R 591020 CDS YP_005726598.1 384542536 12317381 1017860..1018285 1 NC_017328.1 TfoX family protein 1018285 sxy-1 12317381 sxy-1 Shigella flexneri 2002017 TfoX family protein YP_005726598.1 1017860 D 591020 CDS YP_005726599.1 384542537 12317382 1018316..1018726 1 NC_017328.1 Insertion element IS2A putative protein 1018726 12317382 SFxv_1040 Shigella flexneri 2002017 Insertion element IS2A putative protein YP_005726599.1 1018316 D 591020 CDS YP_005726600.1 384542538 12317383 1018684..1019337 1 NC_017328.1 IS2 ORF2 1019337 sxy-2 12317383 sxy-2 Shigella flexneri 2002017 IS2 ORF2 YP_005726600.1 1018684 D 591020 CDS YP_005726601.1 384542539 12317384 complement(1018729..1019160) 1 NC_017328.1 putative IS2 ORF 1019160 12317384 SFxv_1043 Shigella flexneri 2002017 putative IS2 ORF YP_005726601.1 1018729 R 591020 CDS YP_005726602.1 384542540 12317385 complement(1019297..1021462) 1 NC_017328.1 hypothetical protein 1021462 yccS 12317385 yccS Shigella flexneri 2002017 hypothetical protein YP_005726602.1 1019297 R 591020 CDS YP_005726603.1 384542541 12317386 complement(1021472..1021918) 1 NC_017328.1 hypothetical protein 1021918 12317386 SFxv_1045 Shigella flexneri 2002017 hypothetical protein YP_005726603.1 1021472 R 591020 CDS YP_005726604.1 384542542 12317387 1021972..1024095 1 NC_017328.1 DNA helicase IV 1024095 helD 12317387 helD Shigella flexneri 2002017 DNA helicase IV YP_005726604.1 1021972 D 591020 CDS YP_005726605.1 384542543 12317388 complement(1024127..1024594) 1 NC_017328.1 Methylglyoxal synthase 1024594 mgsA 12317388 mgsA Shigella flexneri 2002017 Methylglyoxal synthase YP_005726605.1 1024127 R 591020 CDS YP_005726606.1 384542544 12317389 complement(1024681..1025343) 1 NC_017328.1 hypothetical protein 1025343 yccT 12317389 yccT Shigella flexneri 2002017 hypothetical protein YP_005726606.1 1024681 R 591020 CDS YP_005726607.1 384542545 12317390 1025435..1025929 1 NC_017328.1 CoA-binding protein 1025929 yccU 12317390 yccU Shigella flexneri 2002017 CoA-binding protein YP_005726607.1 1025435 D 591020 CDS YP_005726608.1 384542546 12317391 complement(1025974..1026342) 1 NC_017328.1 Heat shock protein hspQ 1026342 hspQ 12317391 hspQ Shigella flexneri 2002017 Heat shock protein hspQ YP_005726608.1 1025974 R 591020 CDS YP_005726609.1 384542547 12317392 complement(1026349..1027539) 1 NC_017328.1 putative SAM-dependent methyltransferase 1027539 yccW 12317392 yccW Shigella flexneri 2002017 putative SAM-dependent methyltransferase YP_005726609.1 1026349 R 591020 CDS YP_005726610.1 384542548 12317393 1027634..1027912 1 NC_017328.1 acylphosphatase 1027912 yccX 12317393 yccX Shigella flexneri 2002017 acylphosphatase YP_005726610.1 1027634 D 591020 CDS YP_005726611.1 384542549 12317394 complement(1027909..1028295) 1 NC_017328.1 Sulfurtransferase tusE 1028295 yccK 12317394 yccK Shigella flexneri 2002017 Sulfurtransferase tusE YP_005726611.1 1027909 R 591020 CDS YP_005726612.1 384542550 12317395 complement(1028329..1028988) 1 NC_017328.1 putative carrier/transport protein 1028988 yccA 12317395 yccA Shigella flexneri 2002017 putative carrier/transport protein YP_005726612.1 1028329 R 591020 CDS YP_005726613.1 384542551 12317397 1029708..1030826 1 NC_017328.1 Hydrogenase-1 small chain precursor 1030826 hyaA 12317397 hyaA Shigella flexneri 2002017 Hydrogenase-1 small chain precursor YP_005726613.1 1029708 D 591020 CDS YP_005726614.1 384542552 12317398 1030823..1032616 1 NC_017328.1 Hydrogenase-1 large chain 1032616 hyaB 12317398 hyaB Shigella flexneri 2002017 Hydrogenase-1 large chain YP_005726614.1 1030823 D 591020 CDS YP_005726615.1 384542553 12317399 1032635..1033342 1 NC_017328.1 putative Ni/Fe-hydrogenase 1 b-type cytochrome subunit 1033342 hyaC 12317399 hyaC Shigella flexneri 2002017 putative Ni/Fe-hydrogenase 1 b-type cytochrome subunit YP_005726615.1 1032635 D 591020 CDS YP_005726616.1 384542554 12317400 1033339..1033926 1 NC_017328.1 Hydrogenase-1 operon protein hyaD 1033926 hyaD 12317400 hyaD Shigella flexneri 2002017 Hydrogenase-1 operon protein hyaD YP_005726616.1 1033339 D 591020 CDS YP_005726617.1 384542555 12317401 1033923..1034321 1 NC_017328.1 Hydrogenase-1 operon protein hyaE 1034321 hyaE 12317401 hyaE Shigella flexneri 2002017 Hydrogenase-1 operon protein hyaE YP_005726617.1 1033923 D 591020 CDS YP_005726618.1 384542556 12317402 1034318..1035175 1 NC_017328.1 Hydrogenase-1 operon protein hyaF 1035175 hyaF 12317402 hyaF Shigella flexneri 2002017 Hydrogenase-1 operon protein hyaF YP_005726618.1 1034318 D 591020 CDS YP_005726619.1 384542557 12317403 1035309..1036853 1 NC_017328.1 putative third cytochrome oxidase, subunit I 1036853 appC 12317403 appC Shigella flexneri 2002017 putative third cytochrome oxidase, subunit I YP_005726619.1 1035309 D 591020 CDS YP_005726620.1 384542558 12317404 1036865..1038001 1 NC_017328.1 putative third cytochrome oxidase, subunit II 1038001 appB 12317404 appB Shigella flexneri 2002017 putative third cytochrome oxidase, subunit II YP_005726620.1 1036865 D 591020 CDS YP_005726621.1 384542559 12317405 1038155..1039483 1 NC_017328.1 Phosphoanhydride phosphorylase 1039483 appA 12317405 appA Shigella flexneri 2002017 Phosphoanhydride phosphorylase YP_005726621.1 1038155 D 591020 CDS YP_005726622.1 384542560 12317406 complement(1039598..1041544) 1 NC_017328.1 Tyrosine-protein kinase etk 1041544 etk 12317406 etk Shigella flexneri 2002017 Tyrosine-protein kinase etk YP_005726622.1 1039598 R 591020 CDS YP_005726623.1 384542561 12317407 complement(1041784..1042242) 1 NC_017328.1 Low molecular weight protein-tyrosine-phosphatase etp 1042242 etp 12317407 etp Shigella flexneri 2002017 Low molecular weight protein-tyrosine-phosphatase etp YP_005726623.1 1041784 R 591020 CDS YP_005726624.1 384542562 12317408 complement(1042218..1043378) 1 NC_017328.1 putative polysaccharide export protein gfcE precursor 1043378 gfcE 12317408 gfcE Shigella flexneri 2002017 putative polysaccharide export protein gfcE precursor YP_005726624.1 1042218 R 591020 CDS YP_005726625.1 384542563 12317409 complement(1043403..1045499) 1 NC_017328.1 putative lipoprotein 1045499 gfcD 12317409 gfcD Shigella flexneri 2002017 putative lipoprotein YP_005726625.1 1043403 R 591020 CDS YP_005726626.1 384542564 12317491 complement(1045499..1046245) 1 NC_017328.1 hypothetical protein 1046245 12317491 SFxv_1069 Shigella flexneri 2002017 hypothetical protein YP_005726626.1 1045499 R 591020 CDS YP_005726627.1 384542565 12317492 complement(1046242..1046886) 1 NC_017328.1 putative regulator 1046886 gfcB 12317492 gfcB Shigella flexneri 2002017 putative regulator YP_005726627.1 1046242 R 591020 CDS YP_005726628.1 384542566 12317493 complement(1046993..1047316) 1 NC_017328.1 hypothetical protein 1047316 12317493 SFxv_1071 Shigella flexneri 2002017 hypothetical protein YP_005726628.1 1046993 R 591020 CDS YP_005726629.1 384542567 12317494 complement(1047740..1047952) 1 NC_017328.1 Cold shock-like protein cspH 1047952 12317494 SFxv_1072 Shigella flexneri 2002017 Cold shock-like protein cspH YP_005726629.1 1047740 R 591020 CDS YP_005726630.1 384542568 12317495 1048501..1049004 1 NC_017328.1 IS1 orfB 1049004 12317495 SFxv_1073 Shigella flexneri 2002017 IS1 orfB YP_005726630.1 1048501 D 591020 CDS YP_005726631.1 384542569 12317496 1049026..1049226 1 NC_017328.1 Cold shock-like protein cspG 1049226 cspG 12317496 cspG Shigella flexneri 2002017 Cold shock-like protein cspG YP_005726631.1 1049026 D 591020 CDS YP_005726632.1 384542570 12317497 1049306..1049425 1 NC_017328.1 putative cold-shock protein 1049425 12317497 SFxv_1075 Shigella flexneri 2002017 putative cold-shock protein YP_005726632.1 1049306 D 591020 CDS YP_005726633.1 384542571 12317498 1049400..1049630 1 NC_017328.1 Suppressor of fabA and ts growth mutation 1049630 ymcE 12317498 ymcE Shigella flexneri 2002017 Suppressor of fabA and ts growth mutation YP_005726633.1 1049400 D 591020 CDS YP_005726634.1 384542572 12317499 1049620..1049793 1 NC_017328.1 GnsA protein 1049793 gnsA 12317499 gnsA Shigella flexneri 2002017 GnsA protein YP_005726634.1 1049620 D 591020 CDS YP_005726635.1 384542573 12317500 complement(1049842..1050915) 1 NC_017328.1 putative electron transport protein yccM 1050915 yccM 12317500 yccM Shigella flexneri 2002017 putative electron transport protein yccM YP_005726635.1 1049842 R 591020 CDS YP_005726636.1 384542574 12317502 1053811..1054839 1 NC_017328.1 Periplasmic protein TorT 1054839 torT 12317502 torT Shigella flexneri 2002017 Periplasmic protein TorT YP_005726636.1 1053811 D 591020 CDS YP_005726637.1 384542575 12317503 complement(1054812..1055504) 1 NC_017328.1 TorCAD response regulator 1055504 torR 12317503 torR Shigella flexneri 2002017 TorCAD response regulator YP_005726637.1 1054812 R 591020 CDS YP_005726638.1 384542576 12317504 1055601..1056773 1 NC_017328.1 Trimethylamine N-oxide reductase, cytochrome c-type subunit 1056773 torC 12317504 torC Shigella flexneri 2002017 Trimethylamine N-oxide reductase, cytochrome c-type subunit YP_005726638.1 1055601 D 591020 CDS YP_005726639.1 384542577 12317507 complement(1059516..1060019) 1 NC_017328.1 IS1 orfB 1060019 12317507 SFxv_1085 Shigella flexneri 2002017 IS1 orfB YP_005726639.1 1059516 R 591020 CDS YP_005726640.1 384542578 12317508 1060133..1060279 1 NC_017328.1 IS600 ORF2 1060279 12317508 SFxv_1086 Shigella flexneri 2002017 IS600 ORF2 YP_005726640.1 1060133 D 591020 CDS YP_005726641.1 384542579 12317509 complement(1060779..1061084) 1 NC_017328.1 Chaperone modulatory protein cbpM 1061084 cbpM 12317509 cbpM Shigella flexneri 2002017 Chaperone modulatory protein cbpM YP_005726641.1 1060779 R 591020 CDS YP_005726642.1 384542580 12317510 complement(1061084..1062004) 1 NC_017328.1 curved DNA-binding protein 1062004 cbpA 12317510 cbpA Shigella flexneri 2002017 curved DNA-binding protein YP_005726642.1 1061084 R 591020 CDS YP_005726643.1 384542581 12317511 1062265..1063521 1 NC_017328.1 hypothetical protein 1063521 12317511 SFxv_1090 Shigella flexneri 2002017 hypothetical protein YP_005726643.1 1062265 D 591020 CDS YP_005726644.1 384542582 12317512 1063814..1065055 1 NC_017328.1 Periplasmic glucose-1-phosphatase 1065055 agp 12317512 agp Shigella flexneri 2002017 Periplasmic glucose-1-phosphatase YP_005726644.1 1063814 D 591020 CDS YP_005726645.1 384542583 12317513 complement(1065093..1065320) 1 NC_017328.1 hypothetical protein 1065320 12317513 SFxv_1092 Shigella flexneri 2002017 hypothetical protein YP_005726645.1 1065093 R 591020 CDS YP_005726646.1 384542584 12317514 complement(1065341..1065937) 1 NC_017328.1 flavoprotein WrbA 1065937 wrbA 12317514 wrbA Shigella flexneri 2002017 flavoprotein WrbA YP_005726646.1 1065341 R 591020 CDS YP_005726647.1 384542585 12317515 1066147..1066377 1 NC_017328.1 hypothetical protein 1066377 12317515 SFxv_1094 Shigella flexneri 2002017 hypothetical protein YP_005726647.1 1066147 D 591020 CDS YP_005726648.1 384542586 12317516 complement(1066499..1067893) 1 NC_017328.1 putative transport protein 1067893 rutG 12317516 rutG Shigella flexneri 2002017 putative transport protein YP_005726648.1 1066499 R 591020 CDS YP_005726649.1 384542587 12317517 complement(1067848..1068342) 1 NC_017328.1 Flavin reductase domain protein, FMN-binding protein 1068342 rutF 12317517 rutF Shigella flexneri 2002017 Flavin reductase domain protein, FMN-binding protein YP_005726649.1 1067848 R 591020 CDS YP_005726650.1 384542588 12317518 complement(1068353..1068943) 1 NC_017328.1 putative Nitroreductase 1068943 rutE 12317518 rutE Shigella flexneri 2002017 putative Nitroreductase YP_005726650.1 1068353 R 591020 CDS YP_005726651.1 384542589 12317519 complement(1068953..1069753) 1 NC_017328.1 putative acetyltransferase 1069753 rutD 12317519 rutD Shigella flexneri 2002017 putative acetyltransferase YP_005726651.1 1068953 R 591020 CDS YP_005726652.1 384542590 12317520 complement(1069761..1070147) 1 NC_017328.1 protein rutC 1070147 rutC 12317520 rutC Shigella flexneri 2002017 protein rutC YP_005726652.1 1069761 R 591020 CDS YP_005726653.1 384542591 12317521 complement(1070159..1070893) 1 NC_017328.1 putative synthetase 1070893 rutB 12317521 rutB Shigella flexneri 2002017 putative synthetase YP_005726653.1 1070159 R 591020 CDS YP_005726654.1 384542592 12317522 complement(1070851..1071999) 1 NC_017328.1 putative monooxygenase rutA 1071999 rutA 12317522 rutA Shigella flexneri 2002017 putative monooxygenase rutA YP_005726654.1 1070851 R 591020 CDS YP_005726655.1 384542593 12317523 1072230..1072868 1 NC_017328.1 Transcriptional regulator RutR 1072868 rutR 12317523 rutR Shigella flexneri 2002017 Transcriptional regulator RutR YP_005726655.1 1072230 D 591020 CDS YP_005726656.1 384542594 12317524 complement(1073162..1074394) 1 NC_017328.1 IS91 ORF 1074394 12317524 SFxv_1104 Shigella flexneri 2002017 IS91 ORF YP_005726656.1 1073162 R 591020 CDS YP_005726657.1 384542595 12317525 complement(1074349..1074771) 1 NC_017328.1 IS91 orf 1074771 12317525 SFxv_1106 Shigella flexneri 2002017 IS91 orf YP_005726657.1 1074349 R 591020 CDS YP_005726658.1 384542596 12317526 1074379..1074705 1 NC_017328.1 IS91 orf 1074705 12317526 SFxv_1103 Shigella flexneri 2002017 IS91 orf YP_005726658.1 1074379 D 591020 CDS YP_005726659.1 384542597 12317527 1074770..1075477 1 NC_017328.1 Ferrous iron permease efeU 1075477 12317527 SFxv_1105 Shigella flexneri 2002017 Ferrous iron permease efeU YP_005726659.1 1074770 D 591020 CDS YP_005726660.1 384542598 12317528 1075535..1076662 1 NC_017328.1 protein ycdO precursor 1076662 efeO 12317528 efeO Shigella flexneri 2002017 protein ycdO precursor YP_005726660.1 1075535 D 591020 CDS YP_005726661.1 384542599 12317529 1076668..1077933 1 NC_017328.1 Peroxidase ycdB precursor 1077933 efeB 12317529 efeB Shigella flexneri 2002017 Peroxidase ycdB precursor YP_005726661.1 1076668 D 591020 CDS YP_005726662.1 384542600 12317530 1078405..1079328 1 NC_017328.1 PhoB-dependent, ATP-binding pho regulon component 1079328 phoH 12317530 phoH Shigella flexneri 2002017 PhoB-dependent, ATP-binding pho regulon component YP_005726662.1 1078405 D 591020 CDS YP_005726663.1 384542601 12317532 complement(1080302..1080610) 1 NC_017328.1 Transposase insE for insertion sequence IS3 1080610 12317532 SFxv_1112 Shigella flexneri 2002017 Transposase insE for insertion sequence IS3 YP_005726663.1 1080302 R 591020 CDS YP_005726664.1 384542602 12317533 1080704..1081084 1 NC_017328.1 putative (acyl-carrier-protein) S-malonyltransferase 1081084 12317533 SFxv_1113 Shigella flexneri 2002017 putative (acyl-carrier-protein) S-malonyltransferase YP_005726664.1 1080704 D 591020 CDS YP_005726665.1 384542603 12317534 1081193..1082179 1 NC_017328.1 hypothetical protein 1082179 12317534 SFxv_1114 Shigella flexneri 2002017 hypothetical protein YP_005726665.1 1081193 D 591020 CDS YP_005726666.1 384542604 12317535 1082546..1083763 1 NC_017328.1 putative P4-family integrase 1083763 12317535 SFxv_1115 Shigella flexneri 2002017 putative P4-family integrase YP_005726666.1 1082546 D 591020 CDS YP_005726667.1 384542605 12317536 complement(1084079..1085461) 1 NC_017328.1 CP4-57 prophage hypothetical protein 1085461 12317536 SFxv_1117 Shigella flexneri 2002017 CP4-57 prophage hypothetical protein YP_005726667.1 1084079 R 591020 CDS YP_005726668.1 384542606 12317537 complement(1085433..1085738) 1 NC_017328.1 putative transcriptional regulator 1085738 12317537 SFxv_1117a Shigella flexneri 2002017 putative transcriptional regulator YP_005726668.1 1085433 R 591020 CDS YP_005726669.1 384542607 12317538 1086140..1087657 1 NC_017328.1 hypothetical protein 1087657 12317538 SFxv_1118 Shigella flexneri 2002017 hypothetical protein YP_005726669.1 1086140 D 591020 CDS YP_005726670.1 384542608 12317539 1089032..1089595 1 NC_017328.1 hypothetical protein 1089595 12317539 SFxv_1119 Shigella flexneri 2002017 hypothetical protein YP_005726670.1 1089032 D 591020 CDS YP_005726671.1 384542609 12317540 1090378..1090674 1 NC_017328.1 hypothetical protein 1090674 12317540 SFxv_1120 Shigella flexneri 2002017 hypothetical protein YP_005726671.1 1090378 D 591020 CDS YP_005726672.1 384542610 12317541 complement(1091083..1091529) 1 NC_017328.1 IS629 ORF2 1091529 12317541 SFxv_1121 Shigella flexneri 2002017 IS629 ORF2 YP_005726672.1 1091083 R 591020 CDS YP_005726673.1 384542611 12317542 complement(1091646..1093169) 1 NC_017328.1 Reverse transcriptase-like protein 1093169 12317542 SFxv_1123 Shigella flexneri 2002017 Reverse transcriptase-like protein YP_005726673.1 1091646 R 591020 CDS YP_005726674.1 384542612 12317543 1093123..1093548 1 NC_017328.1 hypothetical protein 1093548 12317543 SFxv_1122 Shigella flexneri 2002017 hypothetical protein YP_005726674.1 1093123 D 591020 CDS YP_005726675.1 384542613 12317544 1093583..1093834 1 NC_017328.1 hypothetical protein 1093834 12317544 SFxv_1124 Shigella flexneri 2002017 hypothetical protein YP_005726675.1 1093583 D 591020 CDS YP_005726676.1 384542614 12317545 complement(1093761..1094240) 1 NC_017328.1 IS629 orfB 1094240 12317545 SFxv_1126 Shigella flexneri 2002017 IS629 orfB YP_005726676.1 1093761 R 591020 CDS YP_005726677.1 384542615 12317546 complement(1094240..1094566) 1 NC_017328.1 IS629 orfA 1094566 12317546 SFxv_1127 Shigella flexneri 2002017 IS629 orfA YP_005726677.1 1094240 R 591020 CDS YP_005726678.1 384542616 12317547 1094741..1095034 1 NC_017328.1 putative transposase 1095034 12317547 SFxv_1128 Shigella flexneri 2002017 putative transposase YP_005726678.1 1094741 D 591020 CDS YP_005726679.1 384542617 12317548 complement(1095085..1095303) 1 NC_017328.1 TetR family transcriptional regulator 1095303 12317548 SFxv_1129 Shigella flexneri 2002017 TetR family transcriptional regulator YP_005726679.1 1095085 R 591020 CDS YP_005726680.1 384542618 12317549 1095361..1095669 1 NC_017328.1 Transposase insE for insertion sequence IS3 1095669 12317549 SFxv_1130 Shigella flexneri 2002017 Transposase insE for insertion sequence IS3 YP_005726680.1 1095361 D 591020 CDS YP_005726681.1 384542619 12317550 1095666..1096532 1 NC_017328.1 IS3, transposase orfB 1096532 12317550 SFxv_1131 Shigella flexneri 2002017 IS3, transposase orfB YP_005726681.1 1095666 D 591020 CDS YP_005726682.1 384542620 12317551 complement(1096812..1098089) 1 NC_017328.1 hypothetical protein 1098089 12317551 SFxv_1132 Shigella flexneri 2002017 hypothetical protein YP_005726682.1 1096812 R 591020 CDS YP_005726683.1 384542621 12317552 complement(1098152..1100149) 1 NC_017328.1 putative Choline-glycine betaine transporter 1100149 12317552 SFxv_1133 Shigella flexneri 2002017 putative Choline-glycine betaine transporter YP_005726683.1 1098152 R 591020 CDS YP_005726684.1 384542622 12317553 complement(1100303..1101121) 1 NC_017328.1 ISSd1, transposase orfA/B, fusion 1101121 12317553 SFxv_1134 Shigella flexneri 2002017 ISSd1, transposase orfA/B, fusion YP_005726684.1 1100303 R 591020 CDS YP_005726685.1 384542623 12317554 complement(1101623..1102567) 1 NC_017328.1 Lipid A biosynthesis (KDO)2-(Lauroyl)-lipid IVA acyltransferase 1102567 12317554 SFxv_1135 Shigella flexneri 2002017 Lipid A biosynthesis (KDO)2-(Lauroyl)-lipid IVA acyltransferase YP_005726685.1 1101623 R 591020 CDS YP_005726686.1 384542624 12317555 complement(1102632..1103582) 1 NC_017328.1 VirK-like protein 1103582 12317555 SFxv_1136 Shigella flexneri 2002017 VirK-like protein YP_005726686.1 1102632 R 591020 CDS YP_005726687.1 384542625 12317556 complement(1103587..1104069) 1 NC_017328.1 putative glycosyl transferase, group 1 family protein 1104069 12317556 SFxv_1137 Shigella flexneri 2002017 putative glycosyl transferase, group 1 family protein YP_005726687.1 1103587 R 591020 CDS YP_005726688.1 384542626 12317557 complement(1104092..1104595) 1 NC_017328.1 Insertion element IS1 4 protein insB 1104595 12317557 SFxv_1138 Shigella flexneri 2002017 Insertion element IS1 4 protein insB YP_005726688.1 1104092 R 591020 CDS YP_005726689.1 384542627 12317558 complement(1104848..1105264) 1 NC_017328.1 putative transcriptional regulator TetD 1105264 12317558 SFxv_1138a Shigella flexneri 2002017 putative transcriptional regulator TetD YP_005726689.1 1104848 R 591020 CDS YP_005726690.1 384542628 12317559 1105352..1105945 1 NC_017328.1 Transposon Tn10 tetC protein 1105945 12317559 SFxv_1139 Shigella flexneri 2002017 Transposon Tn10 tetC protein YP_005726690.1 1105352 D 591020 CDS YP_005726691.1 384542629 12317560 complement(1106058..1107263) 1 NC_017328.1 Tetracycline resistance protein, class B (TetA(B)) (Metal- tetracycline/H(+) antiporter) 1107263 12317560 SFxv_1140 Shigella flexneri 2002017 Tetracycline resistance protein, class B (TetA(B)) (Metal- tetracycline/H(+) antiporter) YP_005726691.1 1106058 R 591020 CDS YP_005726692.1 384542630 12317561 1107342..1107968 1 NC_017328.1 Tetracycline repressor protein class B from transposon Tn10 1107968 12317561 SFxv_1141 Shigella flexneri 2002017 Tetracycline repressor protein class B from transposon Tn10 YP_005726692.1 1107342 D 591020 CDS YP_005726693.1 384542631 12317562 complement(1108351..1108854) 1 NC_017328.1 Insertion element IS1 4 protein insB 1108854 12317562 SFxv_1142 Shigella flexneri 2002017 Insertion element IS1 4 protein insB YP_005726693.1 1108351 R 591020 CDS YP_005726694.1 384542632 12317563 complement(1109184..1109975) 1 NC_017328.1 Streptomycin adenyltransferase 1109975 12317563 SFxv_1143 Shigella flexneri 2002017 Streptomycin adenyltransferase YP_005726694.1 1109184 R 591020 CDS YP_005726695.1 384542633 12317564 complement(1110088..1110918) 1 NC_017328.1 Oxacillinase 1110918 12317564 SFxv_1144 Shigella flexneri 2002017 Oxacillinase YP_005726695.1 1110088 R 591020 CDS YP_005726696.1 384542634 12317565 1111128..1112141 1 NC_017328.1 Integrase/recombinase 1112141 12317565 SFxv_1145 Shigella flexneri 2002017 Integrase/recombinase YP_005726696.1 1111128 D 591020 CDS YP_005726697.1 384542635 12317566 1112110..1112694 1 NC_017328.1 Urf2 protein 1112694 12317566 SFxv_1146 Shigella flexneri 2002017 Urf2 protein YP_005726697.1 1112110 D 591020 CDS YP_005726698.1 384542636 12317567 1112820..1113380 1 NC_017328.1 Transposon Tn21 resolvase 1113380 12317567 SFxv_1147 Shigella flexneri 2002017 Transposon Tn21 resolvase YP_005726698.1 1112820 D 591020 CDS YP_005726699.1 384542637 12317568 1113383..1116349 1 NC_017328.1 TnpA transposase 1116349 12317568 SFxv_1148 Shigella flexneri 2002017 TnpA transposase YP_005726699.1 1113383 D 591020 CDS YP_005726700.1 384542638 12317569 1116416..1116793 1 NC_017328.1 GNAT family acetyltransferase 1116793 12317569 SFxv_1149 Shigella flexneri 2002017 GNAT family acetyltransferase YP_005726700.1 1116416 D 591020 CDS YP_005726701.1 384542639 12317570 complement(1116994..1117653) 1 NC_017328.1 Chloramphenicol acetyltransferase 1117653 12317570 SFxv_1150 Shigella flexneri 2002017 Chloramphenicol acetyltransferase YP_005726701.1 1116994 R 591020 CDS YP_005726702.1 384542640 12317571 1118229..1118630 1 NC_017328.1 IS1 transposase 1118630 12317571 SFxv_1151 Shigella flexneri 2002017 IS1 transposase YP_005726702.1 1118229 D 591020 CDS YP_005726703.1 384542641 12317653 complement(1118747..1119373) 1 NC_017328.1 Tetracycline repressor protein class B from transposon Tn10 1119373 12317653 SFxv_1152 Shigella flexneri 2002017 Tetracycline repressor protein class B from transposon Tn10 YP_005726703.1 1118747 R 591020 CDS YP_005726704.1 384542642 12317654 1119452..1120657 1 NC_017328.1 Tetracycline resistance protein, class B (TetA(B)) (Metal- tetracycline/H(+) antiporter) 1120657 12317654 SFxv_1153 Shigella flexneri 2002017 Tetracycline resistance protein, class B (TetA(B)) (Metal- tetracycline/H(+) antiporter) YP_005726704.1 1119452 D 591020 CDS YP_005726705.1 384542643 12317656 1121450..1121866 1 NC_017328.1 putative transcriptional regulator TetD 1121866 12317656 SFxv_1154a Shigella flexneri 2002017 putative transcriptional regulator TetD YP_005726705.1 1121450 D 591020 CDS YP_005726706.1 384542644 12317657 1122119..1122622 1 NC_017328.1 Insertion element IS1 4 protein insB 1122622 12317657 SFxv_1155 Shigella flexneri 2002017 Insertion element IS1 4 protein insB YP_005726706.1 1122119 D 591020 CDS YP_005726707.1 384542645 12317658 1122805..1123068 1 NC_017328.1 putative DNA polymerase III, gamma/tau subunits 1123068 12317658 SFxv_1156 Shigella flexneri 2002017 putative DNA polymerase III, gamma/tau subunits YP_005726707.1 1122805 D 591020 CDS YP_005726708.1 384542646 12317659 1123461..1124282 1 NC_017328.1 hypothetical protein 1124282 12317659 SFxv_1158 Shigella flexneri 2002017 hypothetical protein YP_005726708.1 1123461 D 591020 CDS YP_005726709.1 384542647 12317660 1124709..1124846 1 NC_017328.1 hypothetical protein 1124846 12317660 SFxv_1159 Shigella flexneri 2002017 hypothetical protein YP_005726709.1 1124709 D 591020 CDS YP_005726710.1 384542648 12317661 1125098..1125589 1 NC_017328.1 putative DNA repair protein 1125589 12317661 SFxv_1160 Shigella flexneri 2002017 putative DNA repair protein YP_005726710.1 1125098 D 591020 CDS YP_005726711.1 384542649 12317662 1125652..1125873 1 NC_017328.1 hypothetical protein 1125873 12317662 SFxv_1161 Shigella flexneri 2002017 hypothetical protein YP_005726711.1 1125652 D 591020 CDS YP_005726712.1 384542650 12317663 1126036..1126410 1 NC_017328.1 putative structural protein 1126410 12317663 SFxv_1163 Shigella flexneri 2002017 putative structural protein YP_005726712.1 1126036 D 591020 CDS YP_005726713.1 384542651 12317664 1126457..1126831 1 NC_017328.1 hypothetical protein 1126831 12317664 SFxv_1164 Shigella flexneri 2002017 hypothetical protein YP_005726713.1 1126457 D 591020 CDS YP_005726714.1 384542652 12317665 1126828..1127319 1 NC_017328.1 hypothetical protein 1127319 12317665 SFxv_1165 Shigella flexneri 2002017 hypothetical protein YP_005726714.1 1126828 D 591020 CDS YP_005726715.1 384542653 12317666 1127331..1127528 1 NC_017328.1 hypothetical protein 1127528 12317666 SFxv_1166 Shigella flexneri 2002017 hypothetical protein YP_005726715.1 1127331 D 591020 CDS YP_005726716.1 384542654 12317667 1127613..1128176 1 NC_017328.1 hypothetical protein 1128176 12317667 SFxv_1167 Shigella flexneri 2002017 hypothetical protein YP_005726716.1 1127613 D 591020 CDS YP_005726717.1 384542655 12317668 complement(1127967..1128194) 1 NC_017328.1 hypothetical protein 1128194 12317668 SFxv_1167a Shigella flexneri 2002017 hypothetical protein YP_005726717.1 1127967 R 591020 CDS YP_005726718.1 384542656 12317669 1128245..1129249 1 NC_017328.1 IS1328 transposase 1129249 12317669 SFxv_1168 Shigella flexneri 2002017 IS1328 transposase YP_005726718.1 1128245 D 591020 CDS YP_005726719.1 384542657 12317670 1129582..1129812 1 NC_017328.1 hypothetical protein 1129812 12317670 SFxv_1169 Shigella flexneri 2002017 hypothetical protein YP_005726719.1 1129582 D 591020 CDS YP_005726720.1 384542658 12317672 complement(1130150..1130263) 1 NC_017328.1 hypothetical protein 1130263 12317672 SFxv_1171 Shigella flexneri 2002017 hypothetical protein YP_005726720.1 1130150 R 591020 CDS YP_005726721.1 384542659 12317674 1131277..1132014 1 NC_017328.1 putative hydrolase ycdX 1132014 ycdX 12317674 ycdX Shigella flexneri 2002017 putative hydrolase ycdX YP_005726721.1 1131277 D 591020 CDS YP_005726722.1 384542660 12317675 1132038..1132592 1 NC_017328.1 putative oxidoreductase 1132592 ycdY 12317675 ycdY Shigella flexneri 2002017 putative oxidoreductase YP_005726722.1 1132038 D 591020 CDS YP_005726723.1 384542661 12317676 1132646..1133185 1 NC_017328.1 putative Amino acid transporter 1133185 ycdZ 12317676 ycdZ Shigella flexneri 2002017 putative Amino acid transporter YP_005726723.1 1132646 D 591020 CDS YP_005726724.1 384542662 12317678 complement(1134051..1134467) 1 NC_017328.1 Curli production assembly/transport component csgG precursor 1134467 csgF 12317678 csgF Shigella flexneri 2002017 Curli production assembly/transport component csgG precursor YP_005726724.1 1134051 R 591020 CDS YP_005726725.1 384542663 12317679 complement(1134492..1134881) 1 NC_017328.1 Curli production assembly/transport component csgG precursor 1134881 csgE 12317679 csgE Shigella flexneri 2002017 Curli production assembly/transport component csgG precursor YP_005726725.1 1134492 R 591020 CDS YP_005726726.1 384542664 12317680 complement(1134886..1135536) 1 NC_017328.1 putative csgAB operon transcriptional regulatory protein 1135536 csgD 12317680 csgD Shigella flexneri 2002017 putative csgAB operon transcriptional regulatory protein YP_005726726.1 1134886 R 591020 CDS YP_005726727.1 384542665 12317681 1136290..1136745 1 NC_017328.1 Minor curlin subunit 1136745 csgB 12317681 csgB Shigella flexneri 2002017 Minor curlin subunit YP_005726727.1 1136290 D 591020 CDS YP_005726728.1 384542666 12317683 complement(1138598..1139422) 1 NC_017328.1 IS911 orfA 1139422 12317683 SFxv_1181 Shigella flexneri 2002017 IS911 orfA YP_005726728.1 1138598 R 591020 CDS YP_005726729.1 384542667 12317684 1140151..1140462 1 NC_017328.1 hypothetical protein 1140462 12317684 SFxv_1182 Shigella flexneri 2002017 hypothetical protein YP_005726729.1 1140151 D 591020 CDS YP_005726730.1 384542668 12317685 1140557..1141090 1 NC_017328.1 putative polyprotein 1141090 ymdB 12317685 ymdB Shigella flexneri 2002017 putative polyprotein YP_005726730.1 1140557 D 591020 CDS YP_005726731.1 384542669 12317686 1141032..1142513 1 NC_017328.1 putative phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases-like enzyme 1142513 ymdC 12317686 ymdC Shigella flexneri 2002017 putative phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases-like enzyme YP_005726731.1 1141032 D 591020 CDS YP_005726732.1 384542670 12317687 complement(1142521..1143678) 1 NC_017328.1 Glucans biosynthesis protein C 1143678 mdoC 12317687 mdoC Shigella flexneri 2002017 Glucans biosynthesis protein C YP_005726732.1 1142521 R 591020 CDS YP_005726733.1 384542671 12317688 complement(1143723..1143866) 1 NC_017328.1 hypothetical protein 1143866 12317688 SFxv_1186 Shigella flexneri 2002017 hypothetical protein YP_005726733.1 1143723 R 591020 CDS YP_005726734.1 384542672 12317689 1144072..1145607 1 NC_017328.1 Glucans biosynthesis protein G precursor 1145607 mdoG 12317689 mdoG Shigella flexneri 2002017 Glucans biosynthesis protein G precursor YP_005726734.1 1144072 D 591020 CDS YP_005726735.1 384542673 12317690 1145600..1148143 1 NC_017328.1 Glucans biosynthesis glucosyltransferase H 1148143 mdoH 12317690 mdoH Shigella flexneri 2002017 Glucans biosynthesis glucosyltransferase H YP_005726735.1 1145600 D 591020 CDS YP_005726736.1 384542674 12317691 complement(1148559..1149791) 1 NC_017328.1 IS91 ORF 1149791 12317691 SFxv_1190 Shigella flexneri 2002017 IS91 ORF YP_005726736.1 1148559 R 591020 CDS YP_005726737.1 384542675 12317692 complement(1149746..1150168) 1 NC_017328.1 IS91 orf 1150168 12317692 SFxv_1192 Shigella flexneri 2002017 IS91 orf YP_005726737.1 1149746 R 591020 CDS YP_005726738.1 384542676 12317693 1149776..1150102 1 NC_017328.1 IS91 orf 1150102 12317693 SFxv_1189 Shigella flexneri 2002017 IS91 orf YP_005726738.1 1149776 D 591020 CDS YP_005726739.1 384542677 12317694 1150136..1151470 1 NC_017328.1 hypothetical protein 1151470 12317694 SFxv_1191 Shigella flexneri 2002017 hypothetical protein YP_005726739.1 1150136 D 591020 CDS YP_005726740.1 384542678 12317695 complement(1151843..1152511) 1 NC_017328.1 IS629 orfB 1152511 12317695 SFxv_1193 Shigella flexneri 2002017 IS629 orfB YP_005726740.1 1151843 R 591020 CDS YP_005726741.1 384542679 12317696 complement(1152726..1153052) 1 NC_017328.1 IS629 orfA 1153052 12317696 SFxv_1195 Shigella flexneri 2002017 IS629 orfA YP_005726741.1 1152726 R 591020 CDS YP_005726742.1 384542680 12317697 1154293..1154652 1 NC_017328.1 IS911 orfA 1154652 12317697 SFxv_1196 Shigella flexneri 2002017 IS911 orfA YP_005726742.1 1154293 D 591020 CDS YP_005726743.1 384542681 12317698 complement(1154658..1155161) 1 NC_017328.1 hypothetical protein 1155161 12317698 SFxv_1197 Shigella flexneri 2002017 hypothetical protein YP_005726743.1 1154658 R 591020 CDS YP_005726744.1 384542682 12317699 1155225..1155590 1 NC_017328.1 IS2 ORF1 1155590 12317699 SFxv_1198 Shigella flexneri 2002017 IS2 ORF1 YP_005726744.1 1155225 D 591020 CDS YP_005726745.1 384542683 12317700 1155548..1156453 1 NC_017328.1 insertion element IS2 transposase InsD 1156453 12317700 SFxv_1199 Shigella flexneri 2002017 insertion element IS2 transposase InsD YP_005726745.1 1155548 D 591020 CDS YP_005726746.1 384542684 12317701 complement(1155593..1156024) 1 NC_017328.1 putative IS2 ORF 1156024 12317701 SFxv_1201 Shigella flexneri 2002017 putative IS2 ORF YP_005726746.1 1155593 R 591020 CDS YP_005726747.1 384542685 12317702 1156849..1157175 1 NC_017328.1 IS629 orfA 1157175 12317702 SFxv_1202 Shigella flexneri 2002017 IS629 orfA YP_005726747.1 1156849 D 591020 CDS YP_005726748.1 384542686 12317703 1157390..1158058 1 NC_017328.1 IS629 ORF2 1158058 12317703 SFxv_1204 Shigella flexneri 2002017 IS629 ORF2 YP_005726748.1 1157390 D 591020 CDS YP_005726749.1 384542687 12317704 1158684..1159502 1 NC_017328.1 IS600 ORF2 1159502 12317704 SFxv_1205 Shigella flexneri 2002017 IS600 ORF2 YP_005726749.1 1158684 D 591020 CDS YP_005726750.1 384542688 12317705 complement(1159527..1160465) 1 NC_017328.1 hypothetical protein 1160465 12317705 SFxv_1206 Shigella flexneri 2002017 hypothetical protein YP_005726750.1 1159527 R 591020 CDS YP_005726751.1 384542689 12317706 complement(1160483..1160680) 1 NC_017328.1 multidrug resistance protein MdtG 1160680 mdtG 12317706 mdtG Shigella flexneri 2002017 multidrug resistance protein MdtG YP_005726751.1 1160483 R 591020 CDS YP_005726752.1 384542690 12317707 complement(1160852..1161835) 1 NC_017328.1 Lipid A biosynthesis lauroyl acyltransferase 1161835 lpxL 12317707 lpxL Shigella flexneri 2002017 Lipid A biosynthesis lauroyl acyltransferase YP_005726752.1 1160852 R 591020 CDS YP_005726753.1 384542691 12317708 1161997..1163049 1 NC_017328.1 putative sulfurtransferase 1163049 yceA 12317708 yceA Shigella flexneri 2002017 putative sulfurtransferase YP_005726753.1 1161997 D 591020 CDS YP_005726754.1 384542692 12317709 complement(1163091..1163666) 1 NC_017328.1 Protein yceI precursor 1163666 yceI 12317709 yceI Shigella flexneri 2002017 Protein yceI precursor YP_005726754.1 1163091 R 591020 CDS YP_005726755.1 384542693 12317710 complement(1163670..1164311) 1 NC_017328.1 putative cytochrome 1164311 yceJ 12317710 yceJ Shigella flexneri 2002017 putative cytochrome YP_005726755.1 1163670 R 591020 CDS YP_005726756.1 384542694 12317711 complement(1164658..1165776) 1 NC_017328.1 N-methyl-L-tryptophan oxidase 1165776 solA 12317711 solA Shigella flexneri 2002017 N-methyl-L-tryptophan oxidase YP_005726756.1 1164658 R 591020 CDS YP_005726757.1 384542695 12317712 complement(1165891..1166148) 1 NC_017328.1 Biofilm regulator bssS 1166148 bssS 12317712 bssS Shigella flexneri 2002017 Biofilm regulator bssS YP_005726757.1 1165891 R 591020 CDS YP_005726758.1 384542696 12317713 complement(1166435..1166737) 1 NC_017328.1 DinI family protein 1166737 dinI 12317713 dinI Shigella flexneri 2002017 DinI family protein YP_005726758.1 1166435 R 591020 CDS YP_005726759.1 384542697 12317714 complement(1166754..1167800) 1 NC_017328.1 Dihydroorotase 1167800 pyrC 12317714 pyrC Shigella flexneri 2002017 Dihydroorotase YP_005726759.1 1166754 R 591020 CDS YP_005726760.1 384542698 12317715 complement(1167906..1168523) 1 NC_017328.1 putative lipoprotein yceB 1168523 yceB 12317715 yceB Shigella flexneri 2002017 putative lipoprotein yceB YP_005726760.1 1167906 R 591020 CDS YP_005726761.1 384542699 12317716 complement(1168600..1169247) 1 NC_017328.1 Glutaredoxin 2 1169247 grxB 12317716 grxB Shigella flexneri 2002017 Glutaredoxin 2 YP_005726761.1 1168600 R 591020 CDS YP_005726762.1 384542700 12317717 complement(1169311..1170519) 1 NC_017328.1 multidrug resistance protein MdtH 1170519 mdtH 12317717 mdtH Shigella flexneri 2002017 multidrug resistance protein MdtH YP_005726762.1 1169311 R 591020 CDS YP_005726763.1 384542701 12317718 1170755..1171339 1 NC_017328.1 Ribosomal-protein-alanine acetyltransferase 1171339 rimJ 12317718 rimJ Shigella flexneri 2002017 Ribosomal-protein-alanine acetyltransferase YP_005726763.1 1170755 D 591020 CDS YP_005726764.1 384542702 12317719 1171350..1171997 1 NC_017328.1 hypothetical protein 1171997 12317719 SFxv_1221 Shigella flexneri 2002017 hypothetical protein YP_005726764.1 1171350 D 591020 CDS YP_005726765.1 384542703 12317720 1171999..1172832 1 NC_017328.1 MviM 1172832 yceM 12317720 yceM Shigella flexneri 2002017 MviM YP_005726765.1 1171999 D 591020 CDS YP_005726766.1 384542704 12317721 1173032..1174567 1 NC_017328.1 Integral membrane protein MviN precursor 1174567 yceN 12317721 yceN Shigella flexneri 2002017 Integral membrane protein MviN precursor YP_005726766.1 1173032 D 591020 CDS YP_005726767.1 384542705 12317722 complement(1174607..1175023) 1 NC_017328.1 Flagella synthesis protein FlgN 1175023 flgN 12317722 flgN Shigella flexneri 2002017 Flagella synthesis protein FlgN YP_005726767.1 1174607 R 591020 CDS YP_005726768.1 384542706 12317723 complement(1175028..1175321) 1 NC_017328.1 Negative regulator of flagellin synthesis 1175321 flgM 12317723 flgM Shigella flexneri 2002017 Negative regulator of flagellin synthesis YP_005726768.1 1175028 R 591020 CDS YP_005726769.1 384542707 12317724 complement(1175397..1176056) 1 NC_017328.1 Flagellar basal body P-ring protein FlgA 1176056 flgA 12317724 flgA Shigella flexneri 2002017 Flagellar basal body P-ring protein FlgA YP_005726769.1 1175397 R 591020 CDS YP_005726770.1 384542708 12317725 1176211..1176627 1 NC_017328.1 Flagellar basal-body rod protein flgB 1176627 flgB 12317725 flgB Shigella flexneri 2002017 Flagellar basal-body rod protein flgB YP_005726770.1 1176211 D 591020 CDS YP_005726771.1 384542709 12317727 1177046..1177735 1 NC_017328.1 Flagellar hook protein FlgE 1177735 flgD 12317727 flgD Shigella flexneri 2002017 Flagellar hook protein FlgE YP_005726771.1 1177046 D 591020 CDS YP_005726772.1 384542710 12317728 1177760..1178899 1 NC_017328.1 Flagellar hook protein FlgE 1178899 flgE 12317728 flgE Shigella flexneri 2002017 Flagellar hook protein FlgE YP_005726772.1 1177760 D 591020 CDS YP_005726773.1 384542711 12317730 1179808..1180590 1 NC_017328.1 Flagellar basal body rod protein flgG 1180590 flgG 12317730 flgG Shigella flexneri 2002017 Flagellar basal body rod protein flgG YP_005726773.1 1179808 D 591020 CDS YP_005726774.1 384542712 12317731 1180634..1181341 1 NC_017328.1 Flagellar L-ring protein precursor 1181341 flgH 12317731 flgH Shigella flexneri 2002017 Flagellar L-ring protein precursor YP_005726774.1 1180634 D 591020 CDS YP_005726775.1 384542713 12317732 1181353..1182450 1 NC_017328.1 putative Flagellar basal-body P-ring protein 1182450 flgI 12317732 flgI Shigella flexneri 2002017 putative Flagellar basal-body P-ring protein YP_005726775.1 1181353 D 591020 CDS YP_005726776.1 384542714 12317733 1182420..1183391 1 NC_017328.1 Flagellar basal body protein FlgJ 1183391 flgJ 12317733 flgJ Shigella flexneri 2002017 Flagellar basal body protein FlgJ YP_005726776.1 1182420 D 591020 CDS YP_005726777.1 384542715 12315873 complement(1186250..1189441) 1 NC_017328.1 RNase E 1189441 rne 12315873 rne Shigella flexneri 2002017 RNase E YP_005726777.1 1186250 R 591020 CDS YP_005726778.1 384542716 12315874 1189522..1189896 1 NC_017328.1 hypothetical protein 1189896 12315874 SFxv_1240 Shigella flexneri 2002017 hypothetical protein YP_005726778.1 1189522 D 591020 CDS YP_005726779.1 384542717 12315875 1190014..1190973 1 NC_017328.1 Ribosomal large subunit pseudouridine synthase C 1190973 rluC 12315875 rluC Shigella flexneri 2002017 Ribosomal large subunit pseudouridine synthase C YP_005726779.1 1190014 D 591020 CDS YP_005726780.1 384542718 12315876 complement(1191085..1191708) 1 NC_017328.1 Maf-like protein 1191708 yceF 12315876 yceF Shigella flexneri 2002017 Maf-like protein YP_005726780.1 1191085 R 591020 CDS YP_005726781.1 384542719 12315877 1191868..1192389 1 NC_017328.1 hypothetical protein 1192389 12315877 SFxv_1244 Shigella flexneri 2002017 hypothetical protein YP_005726781.1 1191868 D 591020 CDS YP_005726782.1 384542720 12315878 1192441..1192614 1 NC_017328.1 50S ribosomal protein L32 1192614 rpmF 12315878 rpmF Shigella flexneri 2002017 50S ribosomal protein L32 YP_005726782.1 1192441 D 591020 CDS YP_005726783.1 384542721 12315879 1192695..1193765 1 NC_017328.1 fatty acid/phospholipid synthesis protein 1193765 plsX 12315879 plsX Shigella flexneri 2002017 fatty acid/phospholipid synthesis protein YP_005726783.1 1192695 D 591020 CDS YP_005726784.1 384542722 12315880 1193833..1194786 1 NC_017328.1 3-oxoacyl-ACP synthase 1194786 fabH 12315880 fabH Shigella flexneri 2002017 3-oxoacyl-ACP synthase YP_005726784.1 1193833 D 591020 CDS YP_005726785.1 384542723 12315881 1194802..1195731 1 NC_017328.1 Malonyl-CoA-[acyl-carrier-protein] transacylase 1195731 fabD 12315881 fabD Shigella flexneri 2002017 Malonyl-CoA-[acyl-carrier-protein] transacylase YP_005726785.1 1194802 D 591020 CDS YP_005726786.1 384542724 12315882 1195744..1196478 1 NC_017328.1 3-oxoacyl-ACP reductase 1196478 fabG 12315882 fabG Shigella flexneri 2002017 3-oxoacyl-ACP reductase YP_005726786.1 1195744 D 591020 CDS YP_005726787.1 384542725 12315883 1196689..1196925 1 NC_017328.1 acyl carrier protein 1196925 acpP 12315883 acpP Shigella flexneri 2002017 acyl carrier protein YP_005726787.1 1196689 D 591020 CDS YP_005726788.1 384542726 12315884 1197012..1198253 1 NC_017328.1 3-oxoacyl-ACP synthase 1198253 fabF 12315884 fabF Shigella flexneri 2002017 3-oxoacyl-ACP synthase YP_005726788.1 1197012 D 591020 CDS YP_005726789.1 384542727 12315885 1198373..1199182 1 NC_017328.1 4-amino-4-deoxychorismate lyase 1199182 pabC 12315885 pabC Shigella flexneri 2002017 4-amino-4-deoxychorismate lyase YP_005726789.1 1198373 D 591020 CDS YP_005726790.1 384542728 12315886 1199185..1200207 1 NC_017328.1 putative thymidylate kinase 1200207 yceG 12315886 yceG Shigella flexneri 2002017 putative thymidylate kinase YP_005726790.1 1199185 D 591020 CDS YP_005726791.1 384542729 12315887 1200197..1200838 1 NC_017328.1 thymidylate kinase 1200838 tmk 12315887 tmk Shigella flexneri 2002017 thymidylate kinase YP_005726791.1 1200197 D 591020 CDS YP_005726792.1 384542730 12315888 1200835..1201839 1 NC_017328.1 DNA polymerase III subunit delta' 1201839 holB 12315888 holB Shigella flexneri 2002017 DNA polymerase III subunit delta' YP_005726792.1 1200835 D 591020 CDS YP_005726793.1 384542731 12315889 1201850..1202647 1 NC_017328.1 putative deoxyribonuclease ycfH 1202647 ycfH 12315889 ycfH Shigella flexneri 2002017 putative deoxyribonuclease ycfH YP_005726793.1 1201850 D 591020 CDS YP_005726794.1 384542732 12315890 1202942..1204375 1 NC_017328.1 Glucose-specific IIBC component 1204375 ptsG 12315890 ptsG Shigella flexneri 2002017 Glucose-specific IIBC component YP_005726794.1 1202942 D 591020 CDS YP_005726795.1 384542733 12315892 complement(1206685..1206822) 1 NC_017328.1 hypothetical protein 1206822 12315892 SFxv_1259 Shigella flexneri 2002017 hypothetical protein YP_005726795.1 1206685 R 591020 CDS YP_005726796.1 384542734 12315893 1206953..1207312 1 NC_017328.1 hypothetical protein 1207312 12315893 SFxv_1260 Shigella flexneri 2002017 hypothetical protein YP_005726796.1 1206953 D 591020 CDS YP_005726797.1 384542735 12315894 1207315..1207692 1 NC_017328.1 putative outer membrane lipoprotein YcfL 1207692 ycfL 12315894 ycfL Shigella flexneri 2002017 putative outer membrane lipoprotein YcfL YP_005726797.1 1207315 D 591020 CDS YP_005726798.1 384542736 12315895 1207707..1208348 1 NC_017328.1 fibronectin-binding protein B 1208348 ycfM 12315895 ycfM Shigella flexneri 2002017 fibronectin-binding protein B YP_005726798.1 1207707 D 591020 CDS YP_005726799.1 384542737 12315896 1208329..1209153 1 NC_017328.1 Thiamine kinase 1209153 thiK 12315896 thiK Shigella flexneri 2002017 Thiamine kinase YP_005726799.1 1208329 D 591020 CDS YP_005726800.1 384542738 12315897 1209164..1210189 1 NC_017328.1 Beta-hexosaminidase 1210189 nagZ 12315897 nagZ Shigella flexneri 2002017 Beta-hexosaminidase YP_005726800.1 1209164 D 591020 CDS YP_005726801.1 384542739 12315898 1210212..1210754 1 NC_017328.1 hypothetical protein 1210754 12315898 SFxv_1265 Shigella flexneri 2002017 hypothetical protein YP_005726801.1 1210212 D 591020 CDS YP_005726802.1 384542740 12315899 1211162..1212466 1 NC_017328.1 Respiratory NADH dehydrogenase 1212466 ndh 12315899 ndh Shigella flexneri 2002017 Respiratory NADH dehydrogenase YP_005726802.1 1211162 D 591020 CDS YP_005726803.1 384542741 12315900 1212693..1213232 1 NC_017328.1 surface antigen 1213232 ycfJ 12315900 ycfJ Shigella flexneri 2002017 surface antigen YP_005726803.1 1212693 D 591020 CDS YP_005726804.1 384542742 12315901 complement(1213294..1214004) 1 NC_017328.1 TetR family transcriptional regulator 1214004 ycfQ 12315901 ycfQ Shigella flexneri 2002017 TetR family transcriptional regulator YP_005726804.1 1213294 R 591020 CDS YP_005726805.1 384542743 12315902 1214211..1214423 1 NC_017328.1 putative outer membrane protein 1214423 bhsA 12315902 bhsA Shigella flexneri 2002017 putative outer membrane protein YP_005726805.1 1214211 D 591020 CDS YP_005726806.1 384542744 12315903 complement(1214506..1215471) 1 NC_017328.1 hypothetical protein 1215471 12315903 SFxv_1270 Shigella flexneri 2002017 hypothetical protein YP_005726806.1 1214506 R 591020 CDS YP_005726807.1 384542745 12315904 complement(1215611..1219120) 1 NC_017328.1 transcription-repair coupling factor 1219120 mfd 12315904 mfd Shigella flexneri 2002017 transcription-repair coupling factor YP_005726807.1 1215611 R 591020 CDS YP_005726808.1 384542746 12315905 complement(1219185..1220258) 1 NC_017328.1 hypothetical protein 1220258 ycfT 12315905 ycfT Shigella flexneri 2002017 hypothetical protein YP_005726808.1 1219185 R 591020 CDS YP_005726809.1 384542747 12315906 1220469..1221719 1 NC_017328.1 Lipoprotein-releasing system transmembrane protein lolC 1221719 lolC 12315906 lolC Shigella flexneri 2002017 Lipoprotein-releasing system transmembrane protein lolC YP_005726809.1 1220469 D 591020 CDS YP_005726810.1 384542748 12315907 1221712..1222413 1 NC_017328.1 Lipoprotein-releasing system ATP-binding protein lolD 1222413 lolD 12315907 lolD Shigella flexneri 2002017 Lipoprotein-releasing system ATP-binding protein lolD YP_005726810.1 1221712 D 591020 CDS YP_005726811.1 384542749 12315909 1223685..1224596 1 NC_017328.1 N-acetyl-D-glucosamine kinase 1224596 nagK 12315909 nagK Shigella flexneri 2002017 N-acetyl-D-glucosamine kinase YP_005726811.1 1223685 D 591020 CDS YP_005726812.1 384542750 12315910 1224612..1225433 1 NC_017328.1 NAD-dependent deacetylase 1225433 cobB 12315910 cobB Shigella flexneri 2002017 NAD-dependent deacetylase YP_005726812.1 1224612 D 591020 CDS YP_005726813.1 384542751 12315911 complement(1225589..1226635) 1 NC_017328.1 Spermidine/putrescine-binding periplasmic protein precursor 1226635 potD 12315911 potD Shigella flexneri 2002017 Spermidine/putrescine-binding periplasmic protein precursor YP_005726813.1 1225589 R 591020 CDS YP_005726814.1 384542752 12315912 complement(1226632..1227426) 1 NC_017328.1 Spermidine/putrescine transport system permease 1227426 potC 12315912 potC Shigella flexneri 2002017 Spermidine/putrescine transport system permease YP_005726814.1 1226632 R 591020 CDS YP_005726815.1 384542753 12315913 complement(1227423..1228280) 1 NC_017328.1 binding-protein-dependent transport system inner membrane protein 1228280 potB 12315913 potB Shigella flexneri 2002017 binding-protein-dependent transport system inner membrane protein YP_005726815.1 1227423 R 591020 CDS YP_005726816.1 384542754 12315914 complement(1228264..1229400) 1 NC_017328.1 spermidine/putrescine import ATP-binding protein potA 1229400 potA 12315914 potA Shigella flexneri 2002017 spermidine/putrescine import ATP-binding protein potA YP_005726816.1 1228264 R 591020 CDS YP_005726817.1 384542755 12315915 1229650..1230876 1 NC_017328.1 Peptidase T 1230876 pepT 12315915 pepT Shigella flexneri 2002017 Peptidase T YP_005726817.1 1229650 D 591020 CDS YP_005726818.1 384542756 12315916 complement(1230925..1232055) 1 NC_017328.1 cupin 1232055 ycfD 12315916 ycfD Shigella flexneri 2002017 cupin YP_005726818.1 1230925 R 591020 CDS YP_005726819.1 384542757 12315917 complement(1232126..1232350) 1 NC_017328.1 hypothetical protein 1232350 12315917 SFxv_1285 Shigella flexneri 2002017 hypothetical protein YP_005726819.1 1232126 R 591020 CDS YP_005726820.1 384542758 12315918 1232274..1233524 1 NC_017328.1 putative integrase 1233524 12315918 SFxv_1284 Shigella flexneri 2002017 putative integrase YP_005726820.1 1232274 D 591020 CDS YP_005726821.1 384542759 12315919 1234145..1234891 1 NC_017328.1 hypothetical protein 1234891 12315919 SFxv_1286 Shigella flexneri 2002017 hypothetical protein YP_005726821.1 1234145 D 591020 CDS YP_005726822.1 384542760 12315920 1234798..1235100 1 NC_017328.1 hypothetical protein 1235100 12315920 SFxv_1287 Shigella flexneri 2002017 hypothetical protein YP_005726822.1 1234798 D 591020 CDS YP_005726823.1 384542761 12315921 1235256..1235456 1 NC_017328.1 hypothetical protein 1235456 12315921 SFxv_1288 Shigella flexneri 2002017 hypothetical protein YP_005726823.1 1235256 D 591020 CDS YP_005726824.1 384542762 12315922 1235526..1235759 1 NC_017328.1 hypothetical protein 1235759 12315922 SFxv_1289 Shigella flexneri 2002017 hypothetical protein YP_005726824.1 1235526 D 591020 CDS YP_005726825.1 384542763 12315923 1235765..1236064 1 NC_017328.1 hypothetical protein 1236064 12315923 SFxv_1290 Shigella flexneri 2002017 hypothetical protein YP_005726825.1 1235765 D 591020 CDS YP_005726826.1 384542764 12315924 1236310..1237809 1 NC_017328.1 Bacteriophage P4 DNA primase 1237809 12315924 SFxv_1292 Shigella flexneri 2002017 Bacteriophage P4 DNA primase YP_005726826.1 1236310 D 591020 CDS YP_005726827.1 384542765 12315925 1238098..1238376 1 NC_017328.1 hypothetical protein 1238376 12315925 SFxv_1293 Shigella flexneri 2002017 hypothetical protein YP_005726827.1 1238098 D 591020 CDS YP_005726828.1 384542766 12315926 1238373..1238678 1 NC_017328.1 hypothetical protein 1238678 12315926 SFxv_1295 Shigella flexneri 2002017 hypothetical protein YP_005726828.1 1238373 D 591020 CDS YP_005726829.1 384542767 12315927 1238688..1238849 1 NC_017328.1 hypothetical protein 1238849 12315927 SFxv_1296 Shigella flexneri 2002017 hypothetical protein YP_005726829.1 1238688 D 591020 CDS YP_005726830.1 384542768 12315929 1240350..1240922 1 NC_017328.1 putative head maturation protease of prophage CP-933C 1240922 12315929 SFxv_1299 Shigella flexneri 2002017 putative head maturation protease of prophage CP-933C YP_005726830.1 1240350 D 591020 CDS YP_005726831.1 384542769 12315930 1240924..1242135 1 NC_017328.1 putative head portal protein 1242135 12315930 SFxv_1300 Shigella flexneri 2002017 putative head portal protein YP_005726831.1 1240924 D 591020 CDS YP_005726832.1 384542770 12315931 1242132..1242470 1 NC_017328.1 putative head-tail adaptor 1242470 12315931 SFxv_1301 Shigella flexneri 2002017 putative head-tail adaptor YP_005726832.1 1242132 D 591020 CDS YP_005726833.1 384542771 12315932 1242467..1242763 1 NC_017328.1 hypothetical protein 1242763 12315932 SFxv_1302 Shigella flexneri 2002017 hypothetical protein YP_005726833.1 1242467 D 591020 CDS YP_005726834.1 384542772 12315933 1242991..1243203 1 NC_017328.1 putative holin protein of prophage CP-933C 1243203 12315933 SFxv_1303 Shigella flexneri 2002017 putative holin protein of prophage CP-933C YP_005726834.1 1242991 D 591020 CDS YP_005726835.1 384542773 12315934 1243187..1243369 1 NC_017328.1 hypothetical protein 1243369 12315934 SFxv_1304 Shigella flexneri 2002017 hypothetical protein YP_005726835.1 1243187 D 591020 CDS YP_005726836.1 384542774 12315935 1243440..1243751 1 NC_017328.1 hypothetical protein 1243751 12315935 SFxv_1305 Shigella flexneri 2002017 hypothetical protein YP_005726836.1 1243440 D 591020 CDS YP_005726837.1 384542775 12315936 1243735..1245396 1 NC_017328.1 putative terminase of prophage CP-933C 1245396 12315936 SFxv_1306 Shigella flexneri 2002017 putative terminase of prophage CP-933C YP_005726837.1 1243735 D 591020 CDS YP_005726838.1 384542776 12315937 1245410..1245691 1 NC_017328.1 hypothetical protein 1245691 12315937 SFxv_1307 Shigella flexneri 2002017 hypothetical protein YP_005726838.1 1245410 D 591020 CDS YP_005726839.1 384542777 12315938 complement(1246488..1247948) 1 NC_017328.1 Virulence sensor protein phoQ 1247948 phoQ 12315938 phoQ Shigella flexneri 2002017 Virulence sensor protein phoQ YP_005726839.1 1246488 R 591020 CDS YP_005726840.1 384542778 12315939 complement(1247948..1248619) 1 NC_017328.1 Virulence transcriptional regulatory protein phoP 1248619 phoP 12315939 phoP Shigella flexneri 2002017 Virulence transcriptional regulatory protein phoP YP_005726840.1 1247948 R 591020 CDS YP_005726841.1 384542779 12315940 complement(1248788..1250158) 1 NC_017328.1 Adenylosuccinate lyase 1250158 purB 12315940 purB Shigella flexneri 2002017 Adenylosuccinate lyase YP_005726841.1 1248788 R 591020 CDS YP_005726842.1 384542780 12315941 complement(1250162..1250803) 1 NC_017328.1 protein ycfC 1250803 hflD 12315941 hflD Shigella flexneri 2002017 protein ycfC YP_005726842.1 1250162 R 591020 CDS YP_005726843.1 384542781 12315942 complement(1250839..1251990) 1 NC_017328.1 putative tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 1251990 mnmA 12315942 mnmA Shigella flexneri 2002017 putative tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain YP_005726843.1 1250839 R 591020 CDS YP_005726844.1 384542782 12315943 complement(1251999..1252460) 1 NC_017328.1 putative Nudix hydrolase 1252460 nudJ 12315943 nudJ Shigella flexneri 2002017 putative Nudix hydrolase YP_005726844.1 1251999 R 591020 CDS YP_005726845.1 384542783 12315944 complement(1252470..1253123) 1 NC_017328.1 Ribosomal large subunit pseudouridine synthase E 1253123 rluE 12315944 rluE Shigella flexneri 2002017 Ribosomal large subunit pseudouridine synthase E YP_005726845.1 1252470 R 591020 CDS YP_005726846.1 384542784 12315945 complement(1253211..1253324) 1 NC_017328.1 hypothetical protein 1253324 12315945 SFxv_1317 Shigella flexneri 2002017 hypothetical protein YP_005726846.1 1253211 R 591020 CDS YP_005726847.1 384542785 12315946 1253295..1254545 1 NC_017328.1 Isocitrate dehydrogenase(NADP) 1254545 icd 12315946 icd Shigella flexneri 2002017 Isocitrate dehydrogenase(NADP) YP_005726847.1 1253295 D 591020 CDS YP_005726848.1 384542786 12315947 complement(1254652..1255155) 1 NC_017328.1 IS1 orfB 1255155 12315947 SFxv_1318 Shigella flexneri 2002017 IS1 orfB YP_005726848.1 1254652 R 591020 CDS YP_005726849.1 384542787 12315948 1255443..1256966 1 NC_017328.1 Cyclic diguanylate phosphodiesterase (EAL) domain protein 1256966 ycgG 12315948 ycgG Shigella flexneri 2002017 Cyclic diguanylate phosphodiesterase (EAL) domain protein YP_005726849.1 1255443 D 591020 CDS YP_005726850.1 384542788 12315949 1257098..1257298 1 NC_017328.1 hypothetical protein 1257298 ymgF 12315949 ymgF Shigella flexneri 2002017 hypothetical protein YP_005726850.1 1257098 D 591020 CDS YP_005726851.1 384542789 12315950 1257717..1257926 1 NC_017328.1 hypothetical protein 1257926 12315950 SFxv_1322 Shigella flexneri 2002017 hypothetical protein YP_005726851.1 1257717 D 591020 CDS YP_005726852.1 384542790 12315951 1258043..1260364 1 NC_017328.1 hypothetical protein 1260364 12315951 SFxv_1323 Shigella flexneri 2002017 hypothetical protein YP_005726852.1 1258043 D 591020 CDS YP_005726853.1 384542791 12315952 complement(1260421..1260756) 1 NC_017328.1 hypothetical protein 1260756 12315952 SFxv_1324 Shigella flexneri 2002017 hypothetical protein YP_005726853.1 1260421 R 591020 CDS YP_005726854.1 384542792 12315953 complement(1260760..1261104) 1 NC_017328.1 hypothetical protein 1261104 12315953 SFxv_1325 Shigella flexneri 2002017 hypothetical protein YP_005726854.1 1260760 R 591020 CDS YP_005726855.1 384542793 12315954 complement(1261106..1261279) 1 NC_017328.1 hypothetical protein 1261279 12315954 SFxv_1326 Shigella flexneri 2002017 hypothetical protein YP_005726855.1 1261106 R 591020 CDS YP_005726856.1 384542794 12315955 1261380..1261565 1 NC_017328.1 hypothetical protein 1261565 12315955 SFxv_1327 Shigella flexneri 2002017 hypothetical protein YP_005726856.1 1261380 D 591020 CDS YP_005726857.1 384542795 12315956 1261526..1261645 1 NC_017328.1 hypothetical protein 1261645 12315956 SFxv_1328 Shigella flexneri 2002017 hypothetical protein YP_005726857.1 1261526 D 591020 CDS YP_005726858.1 384542796 12315957 1261614..1262024 1 NC_017328.1 ATPase 1262024 12315957 SFxv_1329 Shigella flexneri 2002017 ATPase YP_005726858.1 1261614 D 591020 CDS YP_005726859.1 384542797 12315958 complement(1262396..1262662) 1 NC_017328.1 cell division topological specificity factor 1262662 minE 12315958 minE Shigella flexneri 2002017 cell division topological specificity factor YP_005726859.1 1262396 R 591020 CDS YP_005726860.1 384542798 12315959 complement(1262666..1263478) 1 NC_017328.1 Septum site-determining protein minD 1263478 minD 12315959 minD Shigella flexneri 2002017 Septum site-determining protein minD YP_005726860.1 1262666 R 591020 CDS YP_005726861.1 384542799 12315960 complement(1263502..1264212) 1 NC_017328.1 Septum site-determining protein minC 1264212 minC 12315960 minC Shigella flexneri 2002017 Septum site-determining protein minC YP_005726861.1 1263502 R 591020 CDS YP_005726862.1 384542800 12315961 1264717..1264995 1 NC_017328.1 hypothetical protein 1264995 12315961 SFxv_1332a Shigella flexneri 2002017 hypothetical protein YP_005726862.1 1264717 D 591020 CDS YP_005726863.1 384542801 12315962 complement(1264920..1265825) 1 NC_017328.1 IS2 ORF2 1265825 12315962 SFxv_1335 Shigella flexneri 2002017 IS2 ORF2 YP_005726863.1 1264920 R 591020 CDS YP_005726864.1 384542802 12315963 1265349..1265780 1 NC_017328.1 putative IS2 ORF 1265780 12315963 SFxv_1333 Shigella flexneri 2002017 putative IS2 ORF YP_005726864.1 1265349 D 591020 CDS YP_005726865.1 384542803 12315964 complement(1265783..1266148) 1 NC_017328.1 IS2 ORF1 1266148 12315964 SFxv_1336 Shigella flexneri 2002017 IS2 ORF1 YP_005726865.1 1265783 R 591020 CDS YP_005726866.1 384542804 12315965 complement(1266512..1266730) 1 NC_017328.1 Peptidase domain protein precursor 1266730 12315965 SFxv_1337 Shigella flexneri 2002017 Peptidase domain protein precursor YP_005726866.1 1266512 R 591020 CDS YP_005726867.1 384542805 12315966 1266866..1267174 1 NC_017328.1 Transposase insE for insertion sequence IS3 1267174 12315966 SFxv_1338 Shigella flexneri 2002017 Transposase insE for insertion sequence IS3 YP_005726867.1 1266866 D 591020 CDS YP_005726868.1 384542806 12315967 1267171..1268037 1 NC_017328.1 IS3 ORF2 1268037 12315967 SFxv_1339 Shigella flexneri 2002017 IS3 ORF2 YP_005726868.1 1267171 D 591020 CDS YP_005726869.1 384542807 12315968 complement(1268034..1268174) 1 NC_017328.1 hypothetical protein 1268174 12315968 SFxv_1340 Shigella flexneri 2002017 hypothetical protein YP_005726869.1 1268034 R 591020 CDS YP_005726870.1 384542808 12315969 1268383..1268709 1 NC_017328.1 hypothetical protein 1268709 12315969 SFxv_1341 Shigella flexneri 2002017 hypothetical protein YP_005726870.1 1268383 D 591020 CDS YP_005726871.1 384542809 12315970 1268781..1269440 1 NC_017328.1 5-carboxymethyl-2-hydroxymuconate delta-isomerase 1269440 12315970 SFxv_1342 Shigella flexneri 2002017 5-carboxymethyl-2-hydroxymuconate delta-isomerase YP_005726871.1 1268781 D 591020 CDS YP_005726872.1 384542810 12315971 1269517..1269978 1 NC_017328.1 hypothetical protein 1269978 12315971 SFxv_1343 Shigella flexneri 2002017 hypothetical protein YP_005726872.1 1269517 D 591020 CDS YP_005726873.1 384542811 12315973 1271458..1271877 1 NC_017328.1 DNA polymerase V subunit 1271877 umuD 12315973 umuD Shigella flexneri 2002017 DNA polymerase V subunit YP_005726873.1 1271458 D 591020 CDS YP_005726874.1 384542812 12315974 1271877..1273145 1 NC_017328.1 Mutagenesis and repair protein 1273145 umuC 12315974 umuC Shigella flexneri 2002017 Mutagenesis and repair protein YP_005726874.1 1271877 D 591020 CDS YP_005726875.1 384542813 12315975 complement(1273308..1273727) 1 NC_017328.1 disulfide bond formation protein B 1273727 dsbB 12315975 dsbB Shigella flexneri 2002017 disulfide bond formation protein B YP_005726875.1 1273308 R 591020 CDS YP_005726876.1 384542814 12315976 complement(1273867..1275408) 1 NC_017328.1 Na+/H+ antiporter 1275408 nhaB 12315976 nhaB Shigella flexneri 2002017 Na+/H+ antiporter YP_005726876.1 1273867 R 591020 CDS YP_005726877.1 384542815 12315977 1275605..1276348 1 NC_017328.1 Fatty acid metabolism regulator protein 1276348 fadR 12315977 fadR Shigella flexneri 2002017 Fatty acid metabolism regulator protein YP_005726877.1 1275605 D 591020 CDS YP_005726878.1 384542816 12315978 complement(1276400..1277932) 1 NC_017328.1 putative sporulation protein 1277932 ycgB 12315978 ycgB Shigella flexneri 2002017 putative sporulation protein YP_005726878.1 1276400 R 591020 CDS YP_005726879.1 384542817 12315979 1278262..1279560 1 NC_017328.1 D-amino acid dehydrogenase small subunit 1279560 dadA 12315979 dadA Shigella flexneri 2002017 D-amino acid dehydrogenase small subunit YP_005726879.1 1278262 D 591020 CDS YP_005726880.1 384542818 12315980 1279570..1280640 1 NC_017328.1 alanine racemase 1280640 dadX 12315980 dadX Shigella flexneri 2002017 alanine racemase YP_005726880.1 1279570 D 591020 CDS YP_005726881.1 384542819 12315981 complement(1281072..1282115) 1 NC_017328.1 hypothetical protein 1282115 12315981 SFxv_1354 Shigella flexneri 2002017 hypothetical protein YP_005726881.1 1281072 R 591020 CDS YP_005726882.1 384542820 12315982 complement(1282833..1284569) 1 NC_017328.1 potassium/proton antiporter 1284569 cvrA 12315982 cvrA Shigella flexneri 2002017 potassium/proton antiporter YP_005726882.1 1282833 R 591020 CDS YP_005726883.1 384542821 12315983 complement(1284664..1285578) 1 NC_017328.1 L,D-carboxypeptidase A 1285578 ldcA 12315983 ldcA Shigella flexneri 2002017 L,D-carboxypeptidase A YP_005726883.1 1284664 R 591020 CDS YP_005726884.1 384542822 12315984 1285564..1286289 1 NC_017328.1 Endotype membrane-bound lytic murein transglycosylase A precursor 1286289 emtA 12315984 emtA Shigella flexneri 2002017 Endotype membrane-bound lytic murein transglycosylase A precursor YP_005726884.1 1285564 D 591020 CDS YP_005726885.1 384542823 12315985 complement(1286291..1287025) 1 NC_017328.1 protein involved in flagellar function 1287025 ycgR 12315985 ycgR Shigella flexneri 2002017 protein involved in flagellar function YP_005726885.1 1286291 R 591020 CDS YP_005726886.1 384542824 12315986 1287193..1287480 1 NC_017328.1 transglycosylase 1287480 ymgE 12315986 ymgE Shigella flexneri 2002017 transglycosylase YP_005726886.1 1287193 D 591020 CDS YP_005726887.1 384542825 12315988 complement(1289510..1290364) 1 NC_017328.1 putative molybdenum transport protein 1290364 12315988 SFxv_1361 Shigella flexneri 2002017 putative molybdenum transport protein YP_005726887.1 1289510 R 591020 CDS YP_005726888.1 384542826 12315989 complement(1290364..1291173) 1 NC_017328.1 hypothetical protein 1291173 12315989 SFxv_1362 Shigella flexneri 2002017 hypothetical protein YP_005726888.1 1290364 R 591020 CDS YP_005726889.1 384542827 12315990 complement(1291183..1291941) 1 NC_017328.1 putative iron compound ABC transporter ATP-binding protein 1291941 12315990 SFxv_1363 Shigella flexneri 2002017 putative iron compound ABC transporter ATP-binding protein YP_005726889.1 1291183 R 591020 CDS YP_005726890.1 384542828 12315991 complement(1291938..1292894) 1 NC_017328.1 putative iron compound ABC transporter permease protein 1292894 12315991 SFxv_1364 Shigella flexneri 2002017 putative iron compound ABC transporter permease protein YP_005726890.1 1291938 R 591020 CDS YP_005726891.1 384542829 12315992 complement(1292918..1293940) 1 NC_017328.1 putative ATP-binding protein of ABC transporter 1293940 12315992 SFxv_1365 Shigella flexneri 2002017 putative ATP-binding protein of ABC transporter YP_005726891.1 1292918 R 591020 CDS YP_005726892.1 384542830 12315993 1294260..1294718 1 NC_017328.1 hypothetical protein 1294718 12315993 SFxv_1366 Shigella flexneri 2002017 hypothetical protein YP_005726892.1 1294260 D 591020 CDS YP_005726893.1 384542831 12315994 complement(1294653..1295156) 1 NC_017328.1 putative IS2 family transposase 1295156 12315994 SFxv_1367 Shigella flexneri 2002017 putative IS2 family transposase YP_005726893.1 1294653 R 591020 CDS YP_005726894.1 384542832 12315995 1295270..1295419 1 NC_017328.1 IS600 ORF2 1295419 12315995 SFxv_1368 Shigella flexneri 2002017 IS600 ORF2 YP_005726894.1 1295270 D 591020 CDS YP_005726895.1 384542833 12315996 1295436..1296071 1 NC_017328.1 hypothetical protein 1296071 12315996 SFxv_1369 Shigella flexneri 2002017 hypothetical protein YP_005726895.1 1295436 D 591020 CDS YP_005726896.1 384542834 12315997 complement(1296302..1297999) 1 NC_017328.1 Periplasmic trehalase precursor 1297999 treA 12315997 treA Shigella flexneri 2002017 Periplasmic trehalase precursor YP_005726896.1 1296302 R 591020 CDS YP_005726897.1 384542835 12315998 1297836..1298159 1 NC_017328.1 hypothetical protein 1298159 12315998 SFxv_1370 Shigella flexneri 2002017 hypothetical protein YP_005726897.1 1297836 D 591020 CDS YP_005726898.1 384542836 12315999 complement(1298319..1299740) 1 NC_017328.1 PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit dhaM 1299740 dhaM 12315999 dhaM Shigella flexneri 2002017 PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit dhaM YP_005726898.1 1298319 R 591020 CDS YP_005726899.1 384542837 12316000 complement(1299748..1300380) 1 NC_017328.1 putative dihydroxyacetone kinase 1300380 dhaL 12316000 dhaL Shigella flexneri 2002017 putative dihydroxyacetone kinase YP_005726899.1 1299748 R 591020 CDS YP_005726900.1 384542838 12316001 complement(1300391..1301491) 1 NC_017328.1 putative dihydroxyacetone kinase 1301491 dhaK 12316001 dhaK Shigella flexneri 2002017 putative dihydroxyacetone kinase YP_005726900.1 1300391 R 591020 CDS YP_005726901.1 384542839 12316002 1301680..1303608 1 NC_017328.1 GAF modulated Fis family sigma-54 specific transcriptional regulator 1303608 dhaR 12316002 dhaR Shigella flexneri 2002017 GAF modulated Fis family sigma-54 specific transcriptional regulator YP_005726901.1 1301680 D 591020 CDS YP_005726902.1 384542840 12316003 complement(1303708..1306575) 1 NC_017328.1 putative large exoproteins involved in heme utilization or adhesion 1306575 ycgV 12316003 ycgV Shigella flexneri 2002017 putative large exoproteins involved in heme utilization or adhesion YP_005726902.1 1303708 R 591020 CDS YP_005726903.1 384542841 12316004 1306920..1307123 1 NC_017328.1 hypothetical protein 1307123 12316004 SFxv_1377 Shigella flexneri 2002017 hypothetical protein YP_005726903.1 1306920 D 591020 CDS YP_005726904.1 384542842 12316005 complement(1307419..1308510) 1 NC_017328.1 GTP-dependent nucleic acid-binding protein engD 1308510 ychF 12316005 ychF Shigella flexneri 2002017 GTP-dependent nucleic acid-binding protein engD YP_005726904.1 1307419 R 591020 CDS YP_005726905.1 384542843 12316006 complement(1308627..1309211) 1 NC_017328.1 Peptidyl-tRNA hydrolase 1309211 pth 12316006 pth Shigella flexneri 2002017 Peptidyl-tRNA hydrolase YP_005726905.1 1308627 R 591020 CDS YP_005726906.1 384542844 12316007 1309489..1309767 1 NC_017328.1 inner membrane protein 1309767 ychH 12316007 ychH Shigella flexneri 2002017 inner membrane protein YP_005726906.1 1309489 D 591020 CDS YP_005726907.1 384542845 12316008 complement(1309822..1311501) 1 NC_017328.1 putative sulfate transporter ychM 1311501 ychM 12316008 ychM Shigella flexneri 2002017 putative sulfate transporter ychM YP_005726907.1 1309822 R 591020 CDS YP_005726908.1 384542846 12316009 complement(1311626..1312639) 1 NC_017328.1 Ribose-phosphate pyrophosphokinase 1312639 prs 12316009 prs Shigella flexneri 2002017 Ribose-phosphate pyrophosphokinase YP_005726908.1 1311626 R 591020 CDS YP_005726909.1 384542847 12316010 complement(1312724..1313575) 1 NC_017328.1 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 1313575 ispE 12316010 ispE Shigella flexneri 2002017 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_005726909.1 1312724 R 591020 CDS YP_005726910.1 384542848 12316011 complement(1313575..1314198) 1 NC_017328.1 Outer membrane lipoprotein LolB 1314198 lolB 12316011 lolB Shigella flexneri 2002017 Outer membrane lipoprotein LolB YP_005726910.1 1313575 R 591020 CDS YP_005726911.1 384542849 12316012 1314214..1315668 1 NC_017328.1 glutamyl-tRNA reductase 1315668 hemA 12316012 hemA Shigella flexneri 2002017 glutamyl-tRNA reductase YP_005726911.1 1314214 D 591020 CDS YP_005726912.1 384542850 12316013 1315710..1316792 1 NC_017328.1 Peptide chain release factor 1 1316792 prfA 12316013 prfA Shigella flexneri 2002017 Peptide chain release factor 1 YP_005726912.1 1315710 D 591020 CDS YP_005726913.1 384542851 12316014 1316792..1317625 1 NC_017328.1 Protein methyltransferase hemK 1317625 prmC 12316014 prmC Shigella flexneri 2002017 Protein methyltransferase hemK YP_005726913.1 1316792 D 591020 CDS YP_005726914.1 384542852 12316015 1317622..1318014 1 NC_017328.1 putative Invasion gene expression up-regulator SirB 1318014 ychQ 12316015 ychQ Shigella flexneri 2002017 putative Invasion gene expression up-regulator SirB YP_005726914.1 1317622 D 591020 CDS YP_005726915.1 384542853 12316016 1318018..1318827 1 NC_017328.1 putative transcriptional regulator 1318827 ychA 12316016 ychA Shigella flexneri 2002017 putative transcriptional regulator YP_005726915.1 1318018 D 591020 CDS YP_005726916.1 384542854 12316017 1318863..1319717 1 NC_017328.1 2-dehydro-3-deoxyphosphooctonate aldolase 1319717 kdsA 12316017 kdsA Shigella flexneri 2002017 2-dehydro-3-deoxyphosphooctonate aldolase YP_005726916.1 1318863 D 591020 CDS YP_005726917.1 384542855 12316018 complement(1320378..1321478) 1 NC_017328.1 Sodium-calcium/proton antiporter 1321478 chaA 12316018 chaA Shigella flexneri 2002017 Sodium-calcium/proton antiporter YP_005726917.1 1320378 R 591020 CDS YP_005726918.1 384542856 12316019 1321749..1321979 1 NC_017328.1 Cation transport regulator chaB 1321979 chaB 12316019 chaB Shigella flexneri 2002017 Cation transport regulator chaB YP_005726918.1 1321749 D 591020 CDS YP_005726919.1 384542857 12316020 1322116..1322832 1 NC_017328.1 Cation transport regulator 1322832 chaC 12316020 chaC Shigella flexneri 2002017 Cation transport regulator YP_005726919.1 1322116 D 591020 CDS YP_005726920.1 384542858 12316021 complement(1322876..1323229) 1 NC_017328.1 hypothetical protein 1323229 ychN 12316021 ychN Shigella flexneri 2002017 hypothetical protein YP_005726920.1 1322876 R 591020 CDS YP_005726921.1 384542859 12316022 1323414..1324808 1 NC_017328.1 putative invasin 1324808 ychO 12316022 ychO Shigella flexneri 2002017 putative invasin YP_005726921.1 1323414 D 591020 CDS YP_005726922.1 384542860 12316023 complement(1324809..1325459) 1 NC_017328.1 Nitrate/nitrite response regulator protein narL 1325459 narL 12316023 narL Shigella flexneri 2002017 Nitrate/nitrite response regulator protein narL YP_005726922.1 1324809 R 591020 CDS YP_005726923.1 384542861 12316024 complement(1325452..1327248) 1 NC_017328.1 Nitrate/nitrite sensor protein NarX 1327248 narX 12316024 narX Shigella flexneri 2002017 Nitrate/nitrite sensor protein NarX YP_005726923.1 1325452 R 591020 CDS YP_005726924.1 384542862 12316025 1327274..1327492 1 NC_017328.1 hypothetical protein 1327492 12316025 SFxv_1398 Shigella flexneri 2002017 hypothetical protein YP_005726924.1 1327274 D 591020 CDS YP_005726925.1 384542863 12316026 1327587..1328978 1 NC_017328.1 Nitrite extrusion protein 1 1328978 narK 12316026 narK Shigella flexneri 2002017 Nitrite extrusion protein 1 YP_005726925.1 1327587 D 591020 CDS YP_005726926.1 384542864 12316027 1329371..1333114 1 NC_017328.1 Nitrate reductase 1 alpha subunit 1333114 narG 12316027 narG Shigella flexneri 2002017 Nitrate reductase 1 alpha subunit YP_005726926.1 1329371 D 591020 CDS YP_005726927.1 384542865 12316028 1333111..1334649 1 NC_017328.1 Respiratory nitrate reductase 1 beta chain 1334649 narH 12316028 narH Shigella flexneri 2002017 Respiratory nitrate reductase 1 beta chain YP_005726927.1 1333111 D 591020 CDS YP_005726928.1 384542866 12316029 1334646..1335356 1 NC_017328.1 Nitrate reductase molybdenum cofactor assembly chaperone 1335356 narJ 12316029 narJ Shigella flexneri 2002017 Nitrate reductase molybdenum cofactor assembly chaperone YP_005726928.1 1334646 D 591020 CDS YP_005726929.1 384542867 12316030 1335356..1336033 1 NC_017328.1 Nitrate reductase 1, cytochrome b(NR), gamma subunit 1336033 narI 12316030 narI Shigella flexneri 2002017 Nitrate reductase 1, cytochrome b(NR), gamma subunit YP_005726929.1 1335356 D 591020 CDS YP_005726930.1 384542868 12316032 complement(1336639..1337481) 1 NC_017328.1 Formyltetrahydrofolate deformylase 1337481 purU 12316032 purU Shigella flexneri 2002017 Formyltetrahydrofolate deformylase YP_005726930.1 1336639 R 591020 CDS YP_005726931.1 384542869 12316033 complement(1337531..1337989) 1 NC_017328.1 hypothetical protein 1337989 12316033 SFxv_1406 Shigella flexneri 2002017 hypothetical protein YP_005726931.1 1337531 R 591020 CDS YP_005726932.1 384542870 12316034 1338063..1339007 1 NC_017328.1 NTE family protein rssA 1339007 rssA 12316034 rssA Shigella flexneri 2002017 NTE family protein rssA YP_005726932.1 1338063 D 591020 CDS YP_005726933.1 384542871 12316035 1339099..1340112 1 NC_017328.1 putative FOG: CheY-like receiver 1340112 rssB 12316035 rssB Shigella flexneri 2002017 putative FOG: CheY-like receiver YP_005726933.1 1339099 D 591020 CDS YP_005726934.1 384542872 12316036 1340314..1341222 1 NC_017328.1 UTP--glucose-1-phosphate uridylyltransferase 1341222 galU 12316036 galU Shigella flexneri 2002017 UTP--glucose-1-phosphate uridylyltransferase YP_005726934.1 1340314 D 591020 CDS YP_005726935.1 384542873 12316037 complement(1341366..1341779) 1 NC_017328.1 DNA-binding protein H-NS 1341779 hns 12316037 hns Shigella flexneri 2002017 DNA-binding protein H-NS YP_005726935.1 1341366 R 591020 CDS YP_005726936.1 384542874 12316038 1342384..1343001 1 NC_017328.1 thymidine kinase 1343001 tdk 12316038 tdk Shigella flexneri 2002017 thymidine kinase YP_005726936.1 1342384 D 591020 CDS YP_005726937.1 384542875 12316039 complement(1343287..1344633) 1 NC_017328.1 IS4 ORF 1344633 12316039 SFxv_1412 Shigella flexneri 2002017 IS4 ORF YP_005726937.1 1343287 R 591020 CDS YP_005726938.1 384542876 12316040 complement(1344741..1347416) 1 NC_017328.1 CoA-linked acetaldehyde dehydrogenase and iron-dependent alcohol dehydrogenase; pyruvate-formate-lyase deactivase 1347416 adhE 12316040 adhE Shigella flexneri 2002017 CoA-linked acetaldehyde dehydrogenase and iron-dependent alcohol dehydrogenase; pyruvate-formate-lyase deactivase YP_005726938.1 1344741 R 591020 CDS YP_005726939.1 384542877 12316041 1347893..1348540 1 NC_017328.1 MarC family integral membrane protein 1348540 ychE 12316041 ychE Shigella flexneri 2002017 MarC family integral membrane protein YP_005726939.1 1347893 D 591020 CDS YP_005726940.1 384542878 12316042 complement(1348907..1349410) 1 NC_017328.1 IS1 ORF2 1349410 12316042 SFxv_1415 Shigella flexneri 2002017 IS1 ORF2 YP_005726940.1 1348907 R 591020 CDS YP_005726941.1 384542879 12316043 1349524..1349700 1 NC_017328.1 putative integrase 1349700 12316043 SFxv_1416 Shigella flexneri 2002017 putative integrase YP_005726941.1 1349524 D 591020 CDS YP_005726942.1 384542880 12316044 1350055..1351686 1 NC_017328.1 Periplasmic oligopeptide binding protein 1351686 oppA 12316044 oppA Shigella flexneri 2002017 Periplasmic oligopeptide binding protein YP_005726942.1 1350055 D 591020 CDS YP_005726943.1 384542881 12316045 1351772..1352692 1 NC_017328.1 oligopeptide transport system permease OppB 1352692 oppB 12316045 oppB Shigella flexneri 2002017 oligopeptide transport system permease OppB YP_005726943.1 1351772 D 591020 CDS YP_005726944.1 384542882 12316046 1352707..1353615 1 NC_017328.1 Oligopeptide transport permease protein 1353615 oppC 12316046 oppC Shigella flexneri 2002017 Oligopeptide transport permease protein YP_005726944.1 1352707 D 591020 CDS YP_005726945.1 384542883 12316047 1353627..1354640 1 NC_017328.1 ATP-binding protein of oligopeptide ABC transporter 1354640 oppD 12316047 oppD Shigella flexneri 2002017 ATP-binding protein of oligopeptide ABC transporter YP_005726945.1 1353627 D 591020 CDS YP_005726946.1 384542884 12316048 1354637..1355641 1 NC_017328.1 ATP-binding protein of oligopeptide ABC transporter 1355641 oppF 12316048 oppF Shigella flexneri 2002017 ATP-binding protein of oligopeptide ABC transporter YP_005726946.1 1354637 D 591020 CDS YP_005726947.1 384542885 12316049 complement(1355694..1356101) 1 NC_017328.1 hypothetical protein 1356101 12316049 SFxv_1422 Shigella flexneri 2002017 hypothetical protein YP_005726947.1 1355694 R 591020 CDS YP_005726948.1 384542886 12316050 complement(1356058..1357518) 1 NC_017328.1 Cardiolipin synthetase 1357518 cls 12316050 cls Shigella flexneri 2002017 Cardiolipin synthetase YP_005726948.1 1356058 R 591020 CDS YP_005726949.1 384542887 12316051 1357661..1357834 1 NC_017328.1 hypothetical protein 1357834 12316051 SFxv_1424 Shigella flexneri 2002017 hypothetical protein YP_005726949.1 1357661 D 591020 CDS YP_005726950.1 384542888 12316052 complement(1357889..1359142) 1 NC_017328.1 putative potassium channel protein 1359142 kch 12316052 kch Shigella flexneri 2002017 putative potassium channel protein YP_005726950.1 1357889 R 591020 CDS YP_005726951.1 384542889 12316053 1359843..1360634 1 NC_017328.1 IS600 ORF2 1360634 12316053 SFxv_1426 Shigella flexneri 2002017 IS600 ORF2 YP_005726951.1 1359843 D 591020 CDS YP_005726952.1 384542890 12316054 complement(1360682..1361074) 1 NC_017328.1 hypothetical protein 1361074 yciI 12316054 yciI Shigella flexneri 2002017 hypothetical protein YP_005726952.1 1360682 R 591020 CDS YP_005726953.1 384542891 12316055 1361151..1361921 1 NC_017328.1 Energy transducing membrane protein tonb 1361921 tonB 12316055 tonB Shigella flexneri 2002017 Energy transducing membrane protein tonb YP_005726953.1 1361151 D 591020 CDS YP_005726954.1 384542892 12316056 complement(1361961..1362359) 1 NC_017328.1 Acyl-CoA thioester hydrolase yciA 1362359 yciA 12316056 yciA Shigella flexneri 2002017 Acyl-CoA thioester hydrolase yciA YP_005726954.1 1361961 R 591020 CDS YP_005726955.1 384542893 12316057 complement(1362464..1363003) 1 NC_017328.1 Intracellular septation protein 1363003 yciB 12316057 yciB Shigella flexneri 2002017 Intracellular septation protein YP_005726955.1 1362464 R 591020 CDS YP_005726956.1 384542894 12316058 complement(1363033..1363776) 1 NC_017328.1 membrane protein yciC 1363776 yciC 12316058 yciC Shigella flexneri 2002017 membrane protein yciC YP_005726956.1 1363033 R 591020 CDS YP_005726957.1 384542895 12316059 1364133..1364771 1 NC_017328.1 Outer membrane protein W 1364771 ompW 12316059 ompW Shigella flexneri 2002017 Outer membrane protein W YP_005726957.1 1364133 D 591020 CDS YP_005726958.1 384542896 12316060 complement(1364831..1365337) 1 NC_017328.1 DEBC related cluster 1365337 yciE 12316060 yciE Shigella flexneri 2002017 DEBC related cluster YP_005726958.1 1364831 R 591020 CDS YP_005726959.1 384542897 12316061 complement(1365383..1365883) 1 NC_017328.1 putative structural protein 1365883 yciF 12316061 yciF Shigella flexneri 2002017 putative structural protein YP_005726959.1 1365383 R 591020 CDS YP_005726960.1 384542898 12316062 complement(1366528..1367334) 1 NC_017328.1 tryptophan synthase subunit alpha 1367334 trpA 12316062 trpA Shigella flexneri 2002017 tryptophan synthase subunit alpha YP_005726960.1 1366528 R 591020 CDS YP_005726961.1 384542899 12316063 complement(1367334..1368527) 1 NC_017328.1 tryptophan synthase subunit beta 1368527 trpB 12316063 trpB Shigella flexneri 2002017 tryptophan synthase subunit beta YP_005726961.1 1367334 R 591020 CDS YP_005726962.1 384542900 12316064 complement(1368539..1369900) 1 NC_017328.1 putative indole-3-glycerol phosphate synthase 1369900 trpC 12316064 trpC Shigella flexneri 2002017 putative indole-3-glycerol phosphate synthase YP_005726962.1 1368539 R 591020 CDS YP_005726963.1 384542901 12316065 complement(1369901..1371496) 1 NC_017328.1 Anthranilate synthase component II, glutamine amidotransferase and phosphoribosylanthranilate transferase 1371496 trpD 12316065 trpD Shigella flexneri 2002017 Anthranilate synthase component II, glutamine amidotransferase and phosphoribosylanthranilate transferase YP_005726963.1 1369901 R 591020 CDS YP_005726964.1 384542902 12316066 complement(1371496..1373058) 1 NC_017328.1 anthranilate synthase 1373058 trpE 12316066 trpE Shigella flexneri 2002017 anthranilate synthase YP_005726964.1 1371496 R 591020 CDS YP_005726965.1 384542903 12316067 1373332..1374213 1 NC_017328.1 putative metal-dependent phosphoesterases (PHP family) 1374213 trpH 12316067 trpH Shigella flexneri 2002017 putative metal-dependent phosphoesterases (PHP family) YP_005726965.1 1373332 D 591020 CDS YP_005726966.1 384542904 12316068 1374174..1374830 1 NC_017328.1 hypothetical protein 1374830 12316068 SFxv_1441 Shigella flexneri 2002017 hypothetical protein YP_005726966.1 1374174 D 591020 CDS YP_005726967.1 384542905 12316069 1374931..1375803 1 NC_017328.1 Ribosomal large subunit pseudouridine synthase B 1375803 rluB 12316069 rluB Shigella flexneri 2002017 Ribosomal large subunit pseudouridine synthase B YP_005726967.1 1374931 D 591020 CDS YP_005726968.1 384542906 12316070 complement(1375843..1376433) 1 NC_017328.1 Cob(I)alamin adenolsyltransferase 1376433 btuR 12316070 btuR Shigella flexneri 2002017 Cob(I)alamin adenolsyltransferase YP_005726968.1 1375843 R 591020 CDS YP_005726969.1 384542907 12316071 complement(1376430..1377188) 1 NC_017328.1 putative oxidoreductase 1377188 yciK 12316071 yciK Shigella flexneri 2002017 putative oxidoreductase YP_005726969.1 1376430 R 591020 CDS YP_005726970.1 384542908 12316072 1377408..1378457 1 NC_017328.1 putative protease sohB 1378457 sohB 12316072 sohB Shigella flexneri 2002017 putative protease sohB YP_005726970.1 1377408 D 591020 CDS YP_005726971.1 384542909 12316073 complement(1378493..1378744) 1 NC_017328.1 hypothetical protein 1378744 12316073 SFxv_1446 Shigella flexneri 2002017 hypothetical protein YP_005726971.1 1378493 R 591020 CDS YP_005726972.1 384542910 12316074 1379082..1381721 1 NC_017328.1 DNA topoisomerase 1381721 topA 12316074 topA Shigella flexneri 2002017 DNA topoisomerase YP_005726972.1 1379082 D 591020 CDS YP_005726973.1 384542911 12316075 1381931..1382905 1 NC_017328.1 Positive transcriptional regulator for cysteine regulon 1382905 cysB 12316075 cysB Shigella flexneri 2002017 Positive transcriptional regulator for cysteine regulon YP_005726973.1 1381931 D 591020 CDS YP_005726974.1 384542912 12316076 1383200..1383364 1 NC_017328.1 hypothetical protein 1383364 12316076 SFxv_1449 Shigella flexneri 2002017 hypothetical protein YP_005726974.1 1383200 D 591020 CDS YP_005726975.1 384542913 12316077 1383346..1383534 1 NC_017328.1 hypothetical protein 1383534 12316077 SFxv_1450 Shigella flexneri 2002017 hypothetical protein YP_005726975.1 1383346 D 591020 CDS YP_005726976.1 384542914 12316078 1383907..1386582 1 NC_017328.1 Aconitate hydrase 1 1386582 acnA 12316078 acnA Shigella flexneri 2002017 Aconitate hydrase 1 YP_005726976.1 1383907 D 591020 CDS YP_005726977.1 384542915 12316079 complement(1386646..1387236) 1 NC_017328.1 GTP cyclohydrolase-2 1387236 ribA 12316079 ribA Shigella flexneri 2002017 GTP cyclohydrolase-2 YP_005726977.1 1386646 R 591020 CDS YP_005726978.1 384542916 12316080 1387406..1388170 1 NC_017328.1 Phosphatidylglycerophosphatase B 1388170 pgpB 12316080 pgpB Shigella flexneri 2002017 Phosphatidylglycerophosphatase B YP_005726978.1 1387406 D 591020 CDS YP_005726979.1 384542917 12316081 1388319..1388627 1 NC_017328.1 Inner membrane protein yciS 1388627 yciS 12316081 yciS Shigella flexneri 2002017 Inner membrane protein yciS YP_005726979.1 1388319 D 591020 CDS YP_005726980.1 384542918 12316082 1388634..1389803 1 NC_017328.1 putative heat shock protein 1389803 yciM 12316082 yciM Shigella flexneri 2002017 putative heat shock protein YP_005726980.1 1388634 D 591020 CDS YP_005726981.1 384542919 12316083 complement(1389837..1389980) 1 NC_017328.1 hypothetical protein 1389980 12316083 SFxv_1456 Shigella flexneri 2002017 hypothetical protein YP_005726981.1 1389837 R 591020 CDS YP_005726982.1 384542920 12316084 1389996..1390733 1 NC_017328.1 Orotidine 5'-phosphate decarboxylase 1390733 pyrF 12316084 pyrF Shigella flexneri 2002017 Orotidine 5'-phosphate decarboxylase YP_005726982.1 1389996 D 591020 CDS YP_005726983.1 384542921 12316085 1390730..1391059 1 NC_017328.1 translation initiation factor Sui1 1391059 yciH 12316085 yciH Shigella flexneri 2002017 translation initiation factor Sui1 YP_005726983.1 1390730 D 591020 CDS YP_005726984.1 384542922 12316086 complement(1391185..1391403) 1 NC_017328.1 Osmotically-inducible lipoprotein B precursor 1391403 osmB 12316086 osmB Shigella flexneri 2002017 Osmotically-inducible lipoprotein B precursor YP_005726984.1 1391185 R 591020 CDS YP_005726985.1 384542923 12316087 complement(1391672..1392421) 1 NC_017328.1 putative transcriptional regulator 1392421 yciT 12316087 yciT Shigella flexneri 2002017 putative transcriptional regulator YP_005726985.1 1391672 R 591020 CDS YP_005726986.1 384542924 12316088 complement(1392511..1392693) 1 NC_017328.1 protein yciZ 1392693 yciZ 12316088 yciZ Shigella flexneri 2002017 protein yciZ YP_005726986.1 1392511 R 591020 CDS YP_005726987.1 384542925 12316090 complement(1395041..1396975) 1 NC_017328.1 Exoribonuclease 2 1396975 rnb 12316090 rnb Shigella flexneri 2002017 Exoribonuclease 2 YP_005726987.1 1395041 R 591020 CDS YP_005726988.1 384542926 12316091 complement(1397043..1398170) 1 NC_017328.1 putative oxidoreductase 1398170 yciW 12316091 yciW Shigella flexneri 2002017 putative oxidoreductase YP_005726988.1 1397043 R 591020 CDS YP_005726989.1 384542927 12316092 complement(1398314..1399102) 1 NC_017328.1 Enoyl-(acyl-carrier-protein) reductase(NADH) 1399102 fabI 12316092 fabI Shigella flexneri 2002017 Enoyl-(acyl-carrier-protein) reductase(NADH) YP_005726989.1 1398314 R 591020 CDS YP_005726990.1 384542928 12316093 complement(1399470..1399823) 1 NC_017328.1 hypothetical protein 1399823 12316093 SFxv_1467 Shigella flexneri 2002017 hypothetical protein YP_005726990.1 1399470 R 591020 CDS YP_005726991.1 384542929 12316094 complement(1399891..1400697) 1 NC_017328.1 Peptide transport system ATP-binding protein sapF 1400697 sapF 12316094 sapF Shigella flexneri 2002017 Peptide transport system ATP-binding protein sapF YP_005726991.1 1399891 R 591020 CDS YP_005726992.1 384542930 12316095 complement(1400699..1401691) 1 NC_017328.1 Peptide transport system ATP-binding protein sapD 1401691 sapD 12316095 sapD Shigella flexneri 2002017 Peptide transport system ATP-binding protein sapD YP_005726992.1 1400699 R 591020 CDS YP_005726993.1 384542931 12316096 complement(1401691..1402581) 1 NC_017328.1 Peptide transport system permease protein sapC 1402581 sapC 12316096 sapC Shigella flexneri 2002017 Peptide transport system permease protein sapC YP_005726993.1 1401691 R 591020 CDS YP_005726994.1 384542932 12316097 complement(1402568..1403533) 1 NC_017328.1 Peptide transport permease protein 1403533 sapB 12316097 sapB Shigella flexneri 2002017 Peptide transport permease protein YP_005726994.1 1402568 R 591020 CDS YP_005726995.1 384542933 12316098 complement(1403530..1405173) 1 NC_017328.1 Peptide transport periplasmic protein 1405173 sapA 12316098 sapA Shigella flexneri 2002017 Peptide transport periplasmic protein YP_005726995.1 1403530 R 591020 CDS YP_005726996.1 384542934 12316099 complement(1405486..1405731) 1 NC_017328.1 hypothetical protein 1405731 ymjA 12316099 ymjA Shigella flexneri 2002017 hypothetical protein YP_005726996.1 1405486 R 591020 CDS YP_005726997.1 384542935 12316100 complement(1405865..1407304) 1 NC_017328.1 putative amino acid/amine transport protein 1407304 puuP 12316100 puuP Shigella flexneri 2002017 putative amino acid/amine transport protein YP_005726997.1 1405865 R 591020 CDS YP_005726998.1 384542936 12316101 complement(1407553..1409049) 1 NC_017328.1 putative glutamine synthetase 1409049 puuA 12316101 puuA Shigella flexneri 2002017 putative glutamine synthetase YP_005726998.1 1407553 R 591020 CDS YP_005726999.1 384542937 12316102 1409171..1409947 1 NC_017328.1 gamma-glutamyl-gamma-aminobutyrate hydrolase 1409947 puuD 12316102 puuD Shigella flexneri 2002017 gamma-glutamyl-gamma-aminobutyrate hydrolase YP_005726999.1 1409171 D 591020 CDS YP_005727000.1 384542938 12316103 1409974..1410531 1 NC_017328.1 HTH-type transcriptional regulator puuR 1410531 puuR 12316103 puuR Shigella flexneri 2002017 HTH-type transcriptional regulator puuR YP_005727000.1 1409974 D 591020 CDS YP_005727001.1 384542939 12316104 1410681..1412153 1 NC_017328.1 Aldehyde dehydrogenase 1412153 puuC 12316104 puuC Shigella flexneri 2002017 Aldehyde dehydrogenase YP_005727001.1 1410681 D 591020 CDS YP_005727002.1 384542940 12316105 1412169..1413449 1 NC_017328.1 putative Glycine/D-amino acid oxidases (deaminating) 1413449 puuB 12316105 puuB Shigella flexneri 2002017 putative Glycine/D-amino acid oxidases (deaminating) YP_005727002.1 1412169 D 591020 CDS YP_005727003.1 384542941 12316106 1413487..1414752 1 NC_017328.1 4-aminobutyrate aminotransferase 1414752 puuE 12316106 puuE Shigella flexneri 2002017 4-aminobutyrate aminotransferase YP_005727003.1 1413487 D 591020 CDS YP_005727004.1 384542942 12316107 complement(1414872..1415849) 1 NC_017328.1 Psp operon transcriptional activator 1415849 pspF 12316107 pspF Shigella flexneri 2002017 Psp operon transcriptional activator YP_005727004.1 1414872 R 591020 CDS YP_005727005.1 384542943 12316108 1416016..1416684 1 NC_017328.1 phage shock protein A 1416684 pspA 12316108 pspA Shigella flexneri 2002017 phage shock protein A YP_005727005.1 1416016 D 591020 CDS YP_005727006.1 384542944 12316109 1416738..1416962 1 NC_017328.1 Phage shock protein 1416962 pspB 12316109 pspB Shigella flexneri 2002017 Phage shock protein YP_005727006.1 1416738 D 591020 CDS YP_005727007.1 384542945 12316110 1416962..1417321 1 NC_017328.1 Phage shock protein C 1417321 pspC 12316110 pspC Shigella flexneri 2002017 Phage shock protein C YP_005727007.1 1416962 D 591020 CDS YP_005727008.1 384542946 12316111 1417318..1417551 1 NC_017328.1 Phage shock protein 1417551 pspD 12316111 pspD Shigella flexneri 2002017 Phage shock protein YP_005727008.1 1417318 D 591020 CDS YP_005727009.1 384542947 12316112 1417594..1417941 1 NC_017328.1 Phage shock protein 1417941 pspE 12316112 pspE Shigella flexneri 2002017 Phage shock protein YP_005727009.1 1417594 D 591020 CDS YP_005727010.1 384542948 12316113 1418153..1419283 1 NC_017328.1 putative glycosidase 1419283 ycjM-1 12316113 ycjM-1 Shigella flexneri 2002017 putative glycosidase YP_005727010.1 1418153 D 591020 CDS YP_005727011.1 384542949 12316114 complement(1419144..1419431) 1 NC_017328.1 putative integrase 1419431 12316114 SFxv_1488 Shigella flexneri 2002017 putative integrase YP_005727011.1 1419144 R 591020 CDS YP_005727012.1 384542950 12316115 1419506..1420009 1 NC_017328.1 IS1 orfB 1420009 12316115 SFxv_1489 Shigella flexneri 2002017 IS1 orfB YP_005727012.1 1419506 D 591020 CDS YP_005727013.1 384542951 12316116 1420075..1420608 1 NC_017328.1 putative glycosidase 1420608 ycjM-2 12316116 ycjM-2 Shigella flexneri 2002017 putative glycosidase YP_005727013.1 1420075 D 591020 CDS YP_005727014.1 384542952 12316118 1421926..1422807 1 NC_017328.1 Inner membrane ABC transporter permease protein ycjO 1422807 ycjO 12316118 ycjO Shigella flexneri 2002017 Inner membrane ABC transporter permease protein ycjO YP_005727014.1 1421926 D 591020 CDS YP_005727015.1 384542953 12316119 1422794..1423636 1 NC_017328.1 putative transport system permease 1423636 ycjP 12316119 ycjP Shigella flexneri 2002017 putative transport system permease YP_005727015.1 1422794 D 591020 CDS YP_005727016.1 384542954 12316120 1423667..1424719 1 NC_017328.1 putative zinc-type alcohol dehydrogenase-like protein ycjQ 1424719 ycjQ 12316120 ycjQ Shigella flexneri 2002017 putative zinc-type alcohol dehydrogenase-like protein ycjQ YP_005727016.1 1423667 D 591020 CDS YP_005727017.1 384542955 12316123 1426573..1428840 1 NC_017328.1 putative trehalose and maltose hydrolase 1428840 ycjT 12316123 ycjT Shigella flexneri 2002017 putative trehalose and maltose hydrolase YP_005727017.1 1426573 D 591020 CDS YP_005727018.1 384542956 12316124 1428837..1429496 1 NC_017328.1 putative beta-phosphoglucomutase 1429496 ycjU 12316124 ycjU Shigella flexneri 2002017 putative beta-phosphoglucomutase YP_005727018.1 1428837 D 591020 CDS YP_005727019.1 384542957 12316125 1429510..1430478 1 NC_017328.1 putative ABC transporter ATP-binding protein ycjV 1430478 12316125 SFxv_1499 Shigella flexneri 2002017 putative ABC transporter ATP-binding protein ycjV YP_005727019.1 1429510 D 591020 CDS YP_005727020.1 384542958 12316127 complement(1431647..1432645) 1 NC_017328.1 putative LACI-type transcriptional regulator 1432645 ycjW 12316127 ycjW Shigella flexneri 2002017 putative LACI-type transcriptional regulator YP_005727020.1 1431647 R 591020 CDS YP_005727021.1 384542959 12316128 1432801..1434198 1 NC_017328.1 hypothetical protein 1434198 12316128 SFxv_1503 Shigella flexneri 2002017 hypothetical protein YP_005727021.1 1432801 D 591020 CDS YP_005727022.1 384542960 12316129 1434195..1435256 1 NC_017328.1 putative membrane protein ycjF 1435256 ycjF 12316129 ycjF Shigella flexneri 2002017 putative membrane protein ycjF YP_005727022.1 1434195 D 591020 CDS YP_005727023.1 384542961 12316130 1435404..1436945 1 NC_017328.1 Transcriptional regulatory protein TyrR 1436945 tyrR 12316130 tyrR Shigella flexneri 2002017 Transcriptional regulatory protein TyrR YP_005727023.1 1435404 D 591020 CDS YP_005727024.1 384542962 12316131 complement(1436989..1437495) 1 NC_017328.1 Thiol peroxidase 1437495 tpx 12316131 tpx Shigella flexneri 2002017 Thiol peroxidase YP_005727024.1 1436989 R 591020 CDS YP_005727025.1 384542963 12316132 1437572..1438579 1 NC_017328.1 putative muconate cycloisomerase I 1438579 ycjG 12316132 ycjG Shigella flexneri 2002017 putative muconate cycloisomerase I YP_005727025.1 1437572 D 591020 CDS YP_005727026.1 384542964 12316133 complement(1438554..1439342) 1 NC_017328.1 putative carboxypeptidase 1439342 mpaA 12316133 mpaA Shigella flexneri 2002017 putative carboxypeptidase YP_005727026.1 1438554 R 591020 CDS YP_005727027.1 384542965 12316134 complement(1439573..1440211) 1 NC_017328.1 hypothetical protein 1440211 12316134 SFxv_1509 Shigella flexneri 2002017 hypothetical protein YP_005727027.1 1439573 R 591020 CDS YP_005727028.1 384542966 12316136 1441039..1442235 1 NC_017328.1 ISSfl2 ORF 1442235 12316136 SFxv_1511 Shigella flexneri 2002017 ISSfl2 ORF YP_005727028.1 1441039 D 591020 CDS YP_005727029.1 384542967 12316137 1443669..1444151 1 NC_017328.1 putative LYSR-type transcriptional regulator 1444151 12316137 SFxv_1514 Shigella flexneri 2002017 putative LYSR-type transcriptional regulator YP_005727029.1 1443669 D 591020 CDS YP_005727030.1 384542968 12316138 complement(1444148..1444966) 1 NC_017328.1 IS600 ORF2 1444966 12316138 SFxv_1515 Shigella flexneri 2002017 IS600 ORF2 YP_005727030.1 1444148 R 591020 CDS YP_005727031.1 384542969 12316139 complement(1446010..1446738) 1 NC_017328.1 IS2 ORF2 1446738 12316139 SFxv_1518 Shigella flexneri 2002017 IS2 ORF2 YP_005727031.1 1446010 R 591020 CDS YP_005727032.1 384542970 12316140 1446262..1446693 1 NC_017328.1 IS2 ORF 1446693 12316140 SFxv_1516 Shigella flexneri 2002017 IS2 ORF YP_005727032.1 1446262 D 591020 CDS YP_005727033.1 384542971 12316141 complement(1446696..1447061) 1 NC_017328.1 Insertion element IS2A putative protein 1447061 12316141 SFxv_1519 Shigella flexneri 2002017 Insertion element IS2A putative protein YP_005727033.1 1446696 R 591020 CDS YP_005727034.1 384542972 12316142 1447255..1447893 1 NC_017328.1 putative bacteriophage protein 1447893 12316142 SFxv_1520 Shigella flexneri 2002017 putative bacteriophage protein YP_005727034.1 1447255 D 591020 CDS YP_005727035.1 384542973 12316143 1447900..1448646 1 NC_017328.1 putative DNA replication protein 1448646 12316143 SFxv_1521 Shigella flexneri 2002017 putative DNA replication protein YP_005727035.1 1447900 D 591020 CDS YP_005727036.1 384542974 12316144 1448661..1449083 1 NC_017328.1 putative bacteriophage protein 1449083 12316144 SFxv_1522 Shigella flexneri 2002017 putative bacteriophage protein YP_005727036.1 1448661 D 591020 CDS YP_005727037.1 384542975 12316145 1449084..1449497 1 NC_017328.1 putative bacteriophage protein 1449497 12316145 SFxv_1523 Shigella flexneri 2002017 putative bacteriophage protein YP_005727037.1 1449084 D 591020 CDS YP_005727038.1 384542976 12316146 complement(1449217..1449816) 1 NC_017328.1 hypothetical protein 1449816 12316146 SFxv_1526 Shigella flexneri 2002017 hypothetical protein YP_005727038.1 1449217 R 591020 CDS YP_005727039.1 384542977 12316147 1449810..1450175 1 NC_017328.1 HNH endonuclease 1450175 12316147 SFxv_1525 Shigella flexneri 2002017 HNH endonuclease YP_005727039.1 1449810 D 591020 CDS YP_005727040.1 384542978 12316148 1450172..1450837 1 NC_017328.1 hypothetical protein 1450837 12316148 SFxv_1527 Shigella flexneri 2002017 hypothetical protein YP_005727040.1 1450172 D 591020 CDS YP_005727041.1 384542979 12316149 1450837..1451202 1 NC_017328.1 putative bacteriophage protein 1451202 12316149 SFxv_1528 Shigella flexneri 2002017 putative bacteriophage protein YP_005727041.1 1450837 D 591020 CDS YP_005727042.1 384542980 12316150 1451600..1451812 1 NC_017328.1 putative cell killing protein encoded within cryptic prophage CP-933M 1451812 12316150 SFxv_1529 Shigella flexneri 2002017 putative cell killing protein encoded within cryptic prophage CP-933M YP_005727042.1 1451600 D 591020 CDS YP_005727043.1 384542981 12316151 complement(1452318..1452821) 1 NC_017328.1 IS1 transposase 1452821 12316151 SFxv_1530 Shigella flexneri 2002017 IS1 transposase YP_005727043.1 1452318 R 591020 CDS YP_005727044.1 384542982 12316152 1452935..1453246 1 NC_017328.1 IS600 ORF2 1453246 12316152 SFxv_1531 Shigella flexneri 2002017 IS600 ORF2 YP_005727044.1 1452935 D 591020 CDS YP_005727045.1 384542983 12316153 1453149..1453748 1 NC_017328.1 hypothetical protein 1453748 12316153 SFxv_1532 Shigella flexneri 2002017 hypothetical protein YP_005727045.1 1453149 D 591020 CDS YP_005727046.1 384542984 12316154 1453748..1454038 1 NC_017328.1 putative bacteriophage protein 1454038 12316154 SFxv_1533 Shigella flexneri 2002017 putative bacteriophage protein YP_005727046.1 1453748 D 591020 CDS YP_005727047.1 384542985 12316155 1454035..1454589 1 NC_017328.1 putative bacteriophage protein 1454589 12316155 SFxv_1534 Shigella flexneri 2002017 putative bacteriophage protein YP_005727047.1 1454035 D 591020 CDS YP_005727048.1 384542986 12316156 1454742..1454915 1 NC_017328.1 putative antirepressor protein 1454915 12316156 SFxv_1535 Shigella flexneri 2002017 putative antirepressor protein YP_005727048.1 1454742 D 591020 CDS YP_005727049.1 384542987 12316157 1454977..1456116 1 NC_017328.1 ISSd1, transposase orfA/B, fusion 1456116 12316157 SFxv_1536 Shigella flexneri 2002017 ISSd1, transposase orfA/B, fusion YP_005727049.1 1454977 D 591020 CDS YP_005727050.1 384542988 12316158 1456022..1456669 1 NC_017328.1 putative bacteriophage protein 1456669 12316158 SFxv_1537 Shigella flexneri 2002017 putative bacteriophage protein YP_005727050.1 1456022 D 591020 CDS YP_005727051.1 384542989 12316163 1457303..1458907 1 NC_017328.1 putative integrase 1458907 12316163 SFxv_1538 Shigella flexneri 2002017 putative integrase YP_005727051.1 1457303 D 591020 CDS YP_005727052.1 384542990 12316164 1460538..1460897 1 NC_017328.1 IS911 orfA 1460897 12316164 SFxv_1539 Shigella flexneri 2002017 IS911 orfA YP_005727052.1 1460538 D 591020 CDS YP_005727053.1 384542991 12316165 1461275..1461457 1 NC_017328.1 putative phage-encoded protein 1461457 12316165 SFxv_1540 Shigella flexneri 2002017 putative phage-encoded protein YP_005727053.1 1461275 D 591020 CDS YP_005727054.1 384542992 12316166 1461680..1462183 1 NC_017328.1 IS1 transposase 1462183 12316166 SFxv_1541 Shigella flexneri 2002017 IS1 transposase YP_005727054.1 1461680 D 591020 CDS YP_005727055.1 384542993 12316167 1462286..1463104 1 NC_017328.1 ISSd1, transposase orfA/B, fusion 1463104 12316167 SFxv_1542 Shigella flexneri 2002017 ISSd1, transposase orfA/B, fusion YP_005727055.1 1462286 D 591020 CDS YP_005727056.1 384542994 12316168 1463132..1463500 1 NC_017328.1 hypothetical protein 1463500 12316168 SFxv_1543 Shigella flexneri 2002017 hypothetical protein YP_005727056.1 1463132 D 591020 CDS YP_005727057.1 384542995 12316169 1463697..1464068 1 NC_017328.1 putative tail fiber assembly protein 1464068 12316169 SFxv_1544 Shigella flexneri 2002017 putative tail fiber assembly protein YP_005727057.1 1463697 D 591020 CDS YP_005727058.1 384542996 12316170 1464092..1465360 1 NC_017328.1 putative tail fiber protein 1465360 12316170 SFxv_1545 Shigella flexneri 2002017 putative tail fiber protein YP_005727058.1 1464092 D 591020 CDS YP_005727059.1 384542997 12316171 complement(1466135..1466992) 1 NC_017328.1 Inner membrane permease 1466992 12316171 SFxv_1546 Shigella flexneri 2002017 Inner membrane permease YP_005727059.1 1466135 R 591020 CDS YP_005727060.1 384542998 12316172 complement(1466989..1467846) 1 NC_017328.1 Inner membrane permease 1467846 12316172 SFxv_1547 Shigella flexneri 2002017 Inner membrane permease YP_005727060.1 1466989 R 591020 CDS YP_005727061.1 384542999 12316173 complement(1467843..1468670) 1 NC_017328.1 Iron transport protein, ATP-binding component 1468670 12316173 SFxv_1548 Shigella flexneri 2002017 Iron transport protein, ATP-binding component YP_005727061.1 1467843 R 591020 CDS YP_005727062.1 384543000 12316174 complement(1468670..1469584) 1 NC_017328.1 Periplasmic binding protein 1469584 12316174 SFxv_1549 Shigella flexneri 2002017 Periplasmic binding protein YP_005727062.1 1468670 R 591020 CDS YP_005727063.1 384543001 12316175 complement(1470016..1470669) 1 NC_017328.1 putative transposase 1470669 12316175 SFxv_1550 Shigella flexneri 2002017 putative transposase YP_005727063.1 1470016 R 591020 CDS YP_005727064.1 384543002 12316176 1470905..1471408 1 NC_017328.1 IS1 orfB 1471408 12316176 SFxv_1551 Shigella flexneri 2002017 IS1 orfB YP_005727064.1 1470905 D 591020 CDS YP_005727065.1 384543003 12316177 complement(1471597..1471764) 1 NC_017328.1 putative excisionase 1471764 12316177 SFxv_1552 Shigella flexneri 2002017 putative excisionase YP_005727065.1 1471597 R 591020 CDS YP_005727066.1 384543004 12316178 complement(1471812..1472480) 1 NC_017328.1 IS629 ORF2 1472480 12316178 SFxv_1553 Shigella flexneri 2002017 IS629 ORF2 YP_005727066.1 1471812 R 591020 CDS YP_005727067.1 384543005 12316179 complement(1472695..1473021) 1 NC_017328.1 IS629 orfA 1473021 12316179 SFxv_1555 Shigella flexneri 2002017 IS629 orfA YP_005727067.1 1472695 R 591020 CDS YP_005727068.1 384543006 12316180 complement(1473096..1474193) 1 NC_017328.1 putative bacteriophage protein 1474193 12316180 SFxv_1556 Shigella flexneri 2002017 putative bacteriophage protein YP_005727068.1 1473096 R 591020 CDS YP_005727069.1 384543007 12316181 complement(1474199..1474519) 1 NC_017328.1 putative host-nuclease inhibitor protein Gam 1474519 12316181 SFxv_1557 Shigella flexneri 2002017 putative host-nuclease inhibitor protein Gam YP_005727069.1 1474199 R 591020 CDS YP_005727070.1 384543008 12316182 1474896..1475714 1 NC_017328.1 IS600 ORF2 1475714 12316182 SFxv_1558 Shigella flexneri 2002017 IS600 ORF2 YP_005727070.1 1474896 D 591020 CDS YP_005727071.1 384543009 12316183 complement(1475762..1477186) 1 NC_017328.1 putative exodeoxyribonuclease VIII 1477186 12316183 SFxv_1559 Shigella flexneri 2002017 putative exodeoxyribonuclease VIII YP_005727071.1 1475762 R 591020 CDS YP_005727072.1 384543010 12316184 complement(1477286..1477561) 1 NC_017328.1 putative bacteriophage protein 1477561 12316184 SFxv_1560 Shigella flexneri 2002017 putative bacteriophage protein YP_005727072.1 1477286 R 591020 CDS YP_005727073.1 384543011 12316185 complement(1477636..1477806) 1 NC_017328.1 putative bacteriophage protein 1477806 12316185 SFxv_1561 Shigella flexneri 2002017 putative bacteriophage protein YP_005727073.1 1477636 R 591020 CDS YP_005727074.1 384543012 12316186 complement(1477806..1478027) 1 NC_017328.1 putative cell division inhibitor protein 1478027 12316186 SFxv_1562 Shigella flexneri 2002017 putative cell division inhibitor protein YP_005727074.1 1477806 R 591020 CDS YP_005727075.1 384543013 12316187 complement(1478104..1479009) 1 NC_017328.1 IS2 ORF2 1479009 12316187 SFxv_1565 Shigella flexneri 2002017 IS2 ORF2 YP_005727075.1 1478104 R 591020 CDS YP_005727076.1 384543014 12316188 1478533..1478964 1 NC_017328.1 putative IS2 ORF 1478964 12316188 SFxv_1563 Shigella flexneri 2002017 putative IS2 ORF YP_005727076.1 1478533 D 591020 CDS YP_005727077.1 384543015 12316189 complement(1478967..1479377) 1 NC_017328.1 IS2 ORF1 1479377 12316189 SFxv_1566 Shigella flexneri 2002017 IS2 ORF1 YP_005727077.1 1478967 R 591020 CDS YP_005727078.1 384543016 12316190 complement(1479630..1480262) 1 NC_017328.1 putative phage-encoded protein 1480262 12316190 SFxv_1567 Shigella flexneri 2002017 putative phage-encoded protein YP_005727078.1 1479630 R 591020 CDS YP_005727079.1 384543017 12316191 1481986..1482609 1 NC_017328.1 hypothetical protein 1482609 12316191 SFxv_1568 Shigella flexneri 2002017 hypothetical protein YP_005727079.1 1481986 D 591020 CDS YP_005727080.1 384543018 12316192 complement(1482789..1484495) 1 NC_017328.1 Invasion plasmid antigen 1484495 12316192 SFxv_1569 Shigella flexneri 2002017 Invasion plasmid antigen YP_005727080.1 1482789 R 591020 CDS YP_005727081.1 384543019 12316193 complement(1484896..1485165) 1 NC_017328.1 putative integrase encoded by prophage CP-933K 1485165 12316193 SFxv_1570 Shigella flexneri 2002017 putative integrase encoded by prophage CP-933K YP_005727081.1 1484896 R 591020 CDS YP_005727082.1 384543020 12316194 1485240..1485743 1 NC_017328.1 IS1 ORF2 1485743 12316194 SFxv_1571 Shigella flexneri 2002017 IS1 ORF2 YP_005727082.1 1485240 D 591020 CDS YP_005727083.1 384543021 12316195 1486023..1486472 1 NC_017328.1 Metallophosphoesterase 1486472 pphA 12316195 pphA Shigella flexneri 2002017 Metallophosphoesterase YP_005727083.1 1486023 D 591020 CDS YP_005727084.1 384543022 12316196 1486872..1487690 1 NC_017328.1 IS600 ORF2 1487690 12316196 SFxv_1573 Shigella flexneri 2002017 IS600 ORF2 YP_005727084.1 1486872 D 591020 CDS YP_005727085.1 384543023 12316197 1487761..1487922 1 NC_017328.1 putative Diadenosine tetraphosphatase-like serine/threonine protein phosphatase 1487922 12316197 SFxv_1574 Shigella flexneri 2002017 putative Diadenosine tetraphosphatase-like serine/threonine protein phosphatase YP_005727085.1 1487761 D 591020 CDS YP_005727086.1 384543024 12316198 complement(1487947..1488222) 1 NC_017328.1 hypothetical protein 1488222 12316198 SFxv_1575 Shigella flexneri 2002017 hypothetical protein YP_005727086.1 1487947 R 591020 CDS YP_005727087.1 384543025 12316199 complement(1488243..1488494) 1 NC_017328.1 hypothetical protein 1488494 12316199 SFxv_1576 Shigella flexneri 2002017 hypothetical protein YP_005727087.1 1488243 R 591020 CDS YP_005727088.1 384543026 12316202 complement(1492705..1493988) 1 NC_017328.1 hypothetical protein 1493988 12316202 SFxv_1579 Shigella flexneri 2002017 hypothetical protein YP_005727088.1 1492705 R 591020 CDS YP_005727089.1 384543027 12316203 1494118..1494615 1 NC_017328.1 GAF domain-containing protein 1494615 12316203 SFxv_1580 Shigella flexneri 2002017 GAF domain-containing protein YP_005727089.1 1494118 D 591020 CDS YP_005727090.1 384543028 12316204 1494712..1495410 1 NC_017328.1 ProP effector protein 1495410 proQ 12316204 proQ Shigella flexneri 2002017 ProP effector protein YP_005727090.1 1494712 D 591020 CDS YP_005727091.1 384543029 12316205 1495430..1497478 1 NC_017328.1 Carboxy-terminal protease for penicillin-binding protein 3 1497478 prc 12316205 prc Shigella flexneri 2002017 Carboxy-terminal protease for penicillin-binding protein 3 YP_005727091.1 1495430 D 591020 CDS YP_005727092.1 384543030 12316206 1497670..1498551 1 NC_017328.1 putative Zn-dependent protease with chaperone function 1498551 htpX 12316206 htpX Shigella flexneri 2002017 putative Zn-dependent protease with chaperone function YP_005727092.1 1497670 D 591020 CDS YP_005727093.1 384543031 12316207 complement(1498597..1500081) 1 NC_017328.1 putative transport protein 1500081 yebQ 12316207 yebQ Shigella flexneri 2002017 putative transport protein YP_005727093.1 1498597 R 591020 CDS YP_005727094.1 384543032 12316208 1500147..1500938 1 NC_017328.1 putative regulator 1500938 kdgR 12316208 kdgR Shigella flexneri 2002017 putative regulator YP_005727094.1 1500147 D 591020 CDS YP_005727095.1 384543033 12316209 complement(1501081..1501320) 1 NC_017328.1 hypothetical protein 1501320 yobH 12316209 yobH Shigella flexneri 2002017 hypothetical protein YP_005727095.1 1501081 R 591020 CDS YP_005727096.1 384543034 12316210 1501479..1501622 1 NC_017328.1 hypothetical protein 1501622 12316210 SFxv_1587 Shigella flexneri 2002017 hypothetical protein YP_005727096.1 1501479 D 591020 CDS YP_005727097.1 384543035 12316211 1501697..1501984 1 NC_017328.1 hypothetical protein 1501984 12316211 SFxv_1588 Shigella flexneri 2002017 hypothetical protein YP_005727097.1 1501697 D 591020 CDS YP_005727098.1 384543036 12316212 1502655..1502798 1 NC_017328.1 hypothetical protein 1502798 12316212 SFxv_1589 Shigella flexneri 2002017 hypothetical protein YP_005727098.1 1502655 D 591020 CDS YP_005727099.1 384543037 12316213 1502811..1503020 1 NC_017328.1 cold-shock protein 1503020 cspC 12316213 cspC Shigella flexneri 2002017 cold-shock protein YP_005727099.1 1502811 D 591020 CDS YP_005727100.1 384543038 12316214 1503186..1503995 1 NC_017328.1 Ribosomal RNA large subunit methyltransferase A 1503995 rrmA 12316214 rrmA Shigella flexneri 2002017 Ribosomal RNA large subunit methyltransferase A YP_005727100.1 1503186 D 591020 CDS YP_005727101.1 384543039 12316215 complement(1503992..1504801) 1 NC_017328.1 membrane protein yebN 1504801 yebN 12316215 yebN Shigella flexneri 2002017 membrane protein yebN YP_005727101.1 1503992 R 591020 CDS YP_005727102.1 384543040 12316216 complement(1505021..1505524) 1 NC_017328.1 IS1 orfB 1505524 12316216 SFxv_1593 Shigella flexneri 2002017 IS1 orfB YP_005727102.1 1505021 R 591020 CDS YP_005727103.1 384543041 12316217 1505638..1505892 1 NC_017328.1 putative alpha-mannosidase 1505892 12316217 SFxv_1594 Shigella flexneri 2002017 putative alpha-mannosidase YP_005727103.1 1505638 D 591020 CDS YP_005727104.1 384543042 12316218 complement(1505747..1506223) 1 NC_017328.1 membrane protein yobD 1506223 yobD 12316218 yobD Shigella flexneri 2002017 membrane protein yobD YP_005727104.1 1505747 R 591020 CDS YP_005727105.1 384543043 12316219 complement(1506278..1507138) 1 NC_017328.1 PTS system mannose-specific transporter subunit IID 1507138 manZ 12316219 manZ Shigella flexneri 2002017 PTS system mannose-specific transporter subunit IID YP_005727105.1 1506278 R 591020 CDS YP_005727106.1 384543044 12316220 complement(1507142..1507942) 1 NC_017328.1 PTS system mannose-specific transporter subunit IIC 1507942 manY 12316220 manY Shigella flexneri 2002017 PTS system mannose-specific transporter subunit IIC YP_005727106.1 1507142 R 591020 CDS YP_005727107.1 384543045 12316221 complement(1508005..1508976) 1 NC_017328.1 PTS system mannose-specific transporter subunit IIAB 1508976 manX 12316221 manX Shigella flexneri 2002017 PTS system mannose-specific transporter subunit IIAB YP_005727107.1 1508005 R 591020 CDS YP_005727108.1 384543046 12316222 1509440..1510990 1 NC_017328.1 putative transport protein 1510990 yoaE 12316222 yoaE Shigella flexneri 2002017 putative transport protein YP_005727108.1 1509440 D 591020 CDS YP_005727109.1 384543047 12316223 complement(1510994..1512622) 1 NC_017328.1 putative FOG: EAL domain protein 1512622 yoaD 12316223 yoaD Shigella flexneri 2002017 putative FOG: EAL domain protein YP_005727109.1 1510994 R 591020 CDS YP_005727110.1 384543048 12316224 complement(1512723..1514087) 1 NC_017328.1 L-serine deaminase 1514087 sdaA 12316224 sdaA Shigella flexneri 2002017 L-serine deaminase YP_005727110.1 1512723 R 591020 CDS YP_005727111.1 384543049 12316225 complement(1514271..1514849) 1 NC_017328.1 Nudix hydrolase nudL 1514849 nudL 12316225 nudL Shigella flexneri 2002017 Nudix hydrolase nudL YP_005727111.1 1514271 R 591020 CDS YP_005727112.1 384543050 12316226 complement(1514853..1516214) 1 NC_017328.1 P-aminobenzoate synthetase, component I 1516214 pabB 12316226 pabB Shigella flexneri 2002017 P-aminobenzoate synthetase, component I YP_005727112.1 1514853 R 591020 CDS YP_005727113.1 384543051 12316227 1516288..1516467 1 NC_017328.1 protein yoaH 1516467 yoaH 12316227 yoaH Shigella flexneri 2002017 protein yoaH YP_005727113.1 1516288 D 591020 CDS YP_005727114.1 384543052 12316228 complement(1516587..1516946) 1 NC_017328.1 hypothetical protein 1516946 12316228 SFxv_1605 Shigella flexneri 2002017 hypothetical protein YP_005727114.1 1516587 R 591020 CDS YP_005727115.1 384543053 12316229 complement(1517308..1517700) 1 NC_017328.1 putative translation initiation inhibitor, yjgF family 1517700 yoaB 12316229 yoaB Shigella flexneri 2002017 putative translation initiation inhibitor, yjgF family YP_005727115.1 1517308 R 591020 CDS YP_005727116.1 384543054 12316230 1517784..1519694 1 NC_017328.1 Helicase c2 1519694 yoaA 12316230 yoaA Shigella flexneri 2002017 Helicase c2 YP_005727116.1 1517784 D 591020 CDS YP_005727117.1 384543055 12316231 1519752..1520447 1 NC_017328.1 Glycoprotease family protein 1520447 yeaZ 12316231 yeaZ Shigella flexneri 2002017 Glycoprotease family protein YP_005727117.1 1519752 D 591020 CDS YP_005727118.1 384543056 12316232 1520487..1521068 1 NC_017328.1 putative outer membrane protein 1521068 yeaY 12316232 yeaY Shigella flexneri 2002017 putative outer membrane protein YP_005727118.1 1520487 D 591020 CDS YP_005727119.1 384543057 12316233 1521208..1522959 1 NC_017328.1 Acyl-CoA synthetase, long-chain-fatty-acid--CoA ligase 1522959 fadD 12316233 fadD Shigella flexneri 2002017 Acyl-CoA synthetase, long-chain-fatty-acid--CoA ligase YP_005727119.1 1521208 D 591020 CDS YP_005727120.1 384543058 12316234 1523029..1524156 1 NC_017328.1 RNase D 1524156 rnd 12316234 rnd Shigella flexneri 2002017 RNase D YP_005727120.1 1523029 D 591020 CDS YP_005727121.1 384543059 12316235 complement(1524210..1525175) 1 NC_017328.1 putative diogenase subunit beta 1525175 yeaX 12316235 yeaX Shigella flexneri 2002017 putative diogenase subunit beta YP_005727121.1 1524210 R 591020 CDS YP_005727122.1 384543060 12316236 complement(1525231..1525863) 1 NC_017328.1 putative Phenylpropionate dioxygenase-like ring-hydroxylating dioxygenases, large terminal subunit 1525863 yeaW 12316236 yeaW Shigella flexneri 2002017 putative Phenylpropionate dioxygenase-like ring-hydroxylating dioxygenases, large terminal subunit YP_005727122.1 1525231 R 591020 CDS YP_005727123.1 384543061 12316237 complement(1526190..1526756) 1 NC_017328.1 putative repressor protein 1526756 12316237 SFxv_1615 Shigella flexneri 2002017 putative repressor protein YP_005727123.1 1526190 R 591020 CDS YP_005727124.1 384543062 12316238 1527461..1528279 1 NC_017328.1 IS600 ORF2 1528279 12316238 SFxv_1616 Shigella flexneri 2002017 IS600 ORF2 YP_005727124.1 1527461 D 591020 CDS YP_005727125.1 384543063 12316239 complement(1529202..1530356) 1 NC_017328.1 GAF domain/diguanylate cyclase (GGDEF) domain protein 1530356 yeaP 12316239 yeaP Shigella flexneri 2002017 GAF domain/diguanylate cyclase (GGDEF) domain protein YP_005727125.1 1529202 R 591020 CDS YP_005727126.1 384543064 12316240 complement(1530686..1531054) 1 NC_017328.1 hypothetical protein 1531054 12316240 SFxv_1618 Shigella flexneri 2002017 hypothetical protein YP_005727126.1 1530686 R 591020 CDS YP_005727127.1 384543065 12316241 complement(1531207..1532268) 1 NC_017328.1 putative amino acid/amine transport protein 1532268 yeaN 12316241 yeaN Shigella flexneri 2002017 putative amino acid/amine transport protein YP_005727127.1 1531207 R 591020 CDS YP_005727128.1 384543066 12316243 complement(1533140..1533586) 1 NC_017328.1 hypothetical protein 1533586 yeaL 12316243 yeaL Shigella flexneri 2002017 hypothetical protein YP_005727128.1 1533140 R 591020 CDS YP_005727129.1 384543067 12316244 1533708..1533860 1 NC_017328.1 hypothetical protein 1533860 12316244 SFxv_1622 Shigella flexneri 2002017 hypothetical protein YP_005727129.1 1533708 D 591020 CDS YP_005727130.1 384543068 12316245 complement(1533861..1534364) 1 NC_017328.1 YbaK/prolyl-tRNA synthetase associated domain-containing protein 1534364 yeaK 12316245 yeaK Shigella flexneri 2002017 YbaK/prolyl-tRNA synthetase associated domain-containing protein YP_005727130.1 1533861 R 591020 CDS YP_005727131.1 384543069 12316246 complement(1534407..1535510) 1 NC_017328.1 hypothetical protein 1535510 12316246 SFxv_1624 Shigella flexneri 2002017 hypothetical protein YP_005727131.1 1534407 R 591020 CDS YP_005727132.1 384543070 12316247 1535887..1536705 1 NC_017328.1 IS600 ORF2 1536705 12316247 SFxv_1625 Shigella flexneri 2002017 IS600 ORF2 YP_005727132.1 1535887 D 591020 CDS YP_005727133.1 384543071 12316248 complement(1536730..1538109) 1 NC_017328.1 putative Ser protein kinase 1538109 yeaG 12316248 yeaG Shigella flexneri 2002017 putative Ser protein kinase YP_005727133.1 1536730 R 591020 CDS YP_005727134.1 384543072 12316249 1538545..1539291 1 NC_017328.1 MltA-interacting protein 1539291 mipA 12316249 mipA Shigella flexneri 2002017 MltA-interacting protein YP_005727134.1 1538545 D 591020 CDS YP_005727135.1 384543073 12316250 1539381..1540142 1 NC_017328.1 putative aldehyde reductase 1540142 yeaE 12316250 yeaE Shigella flexneri 2002017 putative aldehyde reductase YP_005727135.1 1539381 D 591020 CDS YP_005727136.1 384543074 12316251 complement(1540193..1541098) 1 NC_017328.1 Aldose 1-epimerase family protein 1541098 yeaD 12316251 yeaD Shigella flexneri 2002017 Aldose 1-epimerase family protein YP_005727136.1 1540193 R 591020 CDS YP_005727137.1 384543075 12316252 complement(1541161..1542156) 1 NC_017328.1 Glyceraldehyde-3-phosphate dehydrogenase A 1542156 gapA 12316252 gapA Shigella flexneri 2002017 Glyceraldehyde-3-phosphate dehydrogenase A YP_005727137.1 1541161 R 591020 CDS YP_005727138.1 384543076 12316253 1542498..1542911 1 NC_017328.1 Peptide methionine sulfoxide reductase msrB 1542911 msrB 12316253 msrB Shigella flexneri 2002017 Peptide methionine sulfoxide reductase msrB YP_005727138.1 1542498 D 591020 CDS YP_005727139.1 384543077 12316254 1542908..1543225 1 NC_017328.1 hypothetical protein 1543225 12316254 SFxv_1632 Shigella flexneri 2002017 hypothetical protein YP_005727139.1 1542908 D 591020 CDS YP_005727140.1 384543078 12316255 1543595..1544671 1 NC_017328.1 Oxidoreductase, zinc-binding dehydrogenase family 1544671 ydjL 12316255 ydjL Shigella flexneri 2002017 Oxidoreductase, zinc-binding dehydrogenase family YP_005727140.1 1543595 D 591020 CDS YP_005727141.1 384543079 12316256 1544698..1546077 1 NC_017328.1 putative transport protein 1546077 ydjK 12316256 ydjK Shigella flexneri 2002017 putative transport protein YP_005727141.1 1544698 D 591020 CDS YP_005727142.1 384543080 12316258 1547160..1547996 1 NC_017328.1 Fructose-bisphosphate aldolase 1547996 ydjI 12316258 ydjI Shigella flexneri 2002017 Fructose-bisphosphate aldolase YP_005727142.1 1547160 D 591020 CDS YP_005727143.1 384543081 12316259 1548001..1548948 1 NC_017328.1 putative kinase 1548948 ydjH 12316259 ydjH Shigella flexneri 2002017 putative kinase YP_005727143.1 1548001 D 591020 CDS YP_005727144.1 384543082 12316260 1548958..1549938 1 NC_017328.1 putative oxidoreductase ydjG 1549938 ydjG 12316260 ydjG Shigella flexneri 2002017 putative oxidoreductase ydjG YP_005727144.1 1548958 D 591020 CDS YP_005727145.1 384543083 12316261 1550075..1550833 1 NC_017328.1 putative DEOR-type transcriptional regulator 1550833 ydjF 12316261 ydjF Shigella flexneri 2002017 putative DEOR-type transcriptional regulator YP_005727145.1 1550075 D 591020 CDS YP_005727146.1 384543084 12316262 1550951..1552309 1 NC_017328.1 putative transport protein 1552309 ydjE 12316262 ydjE Shigella flexneri 2002017 putative transport protein YP_005727146.1 1550951 D 591020 CDS YP_005727147.1 384543085 12316263 complement(1552402..1553043) 1 NC_017328.1 Pyrazinamidase/nicotinamidase 1553043 pncA 12316263 pncA Shigella flexneri 2002017 Pyrazinamidase/nicotinamidase YP_005727147.1 1552402 R 591020 CDS YP_005727148.1 384543086 12316264 complement(1553054..1554070) 1 NC_017328.1 Cytoplasmic L-asparaginase I 1554070 ansA 12316264 ansA Shigella flexneri 2002017 Cytoplasmic L-asparaginase I YP_005727148.1 1553054 R 591020 CDS YP_005727149.1 384543087 12316265 complement(1554237..1556093) 1 NC_017328.1 putative Periplasmic serine proteases (ClpP class) 1556093 sppA 12316265 sppA Shigella flexneri 2002017 putative Periplasmic serine proteases (ClpP class) YP_005727149.1 1554237 R 591020 CDS YP_005727150.1 384543088 12316266 1556254..1556805 1 NC_017328.1 hypothetical protein 1556805 12316266 SFxv_1644 Shigella flexneri 2002017 hypothetical protein YP_005727150.1 1556254 D 591020 CDS YP_005727151.1 384543089 12316267 1556922..1557965 1 NC_017328.1 Selenide, water dikinase 1557965 selD 12316267 selD Shigella flexneri 2002017 Selenide, water dikinase YP_005727151.1 1556922 D 591020 CDS YP_005727152.1 384543090 12316268 1557913..1559931 1 NC_017328.1 DNA topoisomerase 1559931 topB 12316268 topB Shigella flexneri 2002017 DNA topoisomerase YP_005727152.1 1557913 D 591020 CDS YP_005727153.1 384543091 12316269 1559947..1561098 1 NC_017328.1 Inner membrane protein ynjI 1561098 ynjI 12316269 ynjI Shigella flexneri 2002017 Inner membrane protein ynjI YP_005727153.1 1559947 D 591020 CDS YP_005727154.1 384543092 12316270 complement(1561215..1562381) 1 NC_017328.1 NADP-specific glutamate dehydrogenase 1562381 gdhA 12316270 gdhA Shigella flexneri 2002017 NADP-specific glutamate dehydrogenase YP_005727154.1 1561215 R 591020 CDS YP_005727155.1 384543093 12316271 1562507..1562872 1 NC_017328.1 IS2 ORF1 1562872 12316271 SFxv_1649 Shigella flexneri 2002017 IS2 ORF1 YP_005727155.1 1562507 D 591020 CDS YP_005727156.1 384543094 12316272 1562830..1563735 1 NC_017328.1 Insertion element IS2A putative protein 1563735 12316272 SFxv_1650 Shigella flexneri 2002017 Insertion element IS2A putative protein YP_005727156.1 1562830 D 591020 CDS YP_005727157.1 384543095 12316273 complement(1562875..1563306) 1 NC_017328.1 putative IS2 ORF 1563306 12316273 SFxv_1652 Shigella flexneri 2002017 putative IS2 ORF YP_005727157.1 1562875 R 591020 CDS YP_005727158.1 384543096 12316274 1564130..1564402 1 NC_017328.1 hypothetical protein 1564402 ynjH 12316274 ynjH Shigella flexneri 2002017 hypothetical protein YP_005727158.1 1564130 D 591020 CDS YP_005727159.1 384543097 12316275 complement(1564368..1564775) 1 NC_017328.1 putative NTP pyrophosphohydrolases including oxidative damage repair enzyme 1564775 nudG 12316275 nudG Shigella flexneri 2002017 putative NTP pyrophosphohydrolases including oxidative damage repair enzyme YP_005727159.1 1564368 R 591020 CDS YP_005727160.1 384543098 12316276 1564856..1565482 1 NC_017328.1 putative cytochrome oxidase 1565482 ynjF 12316276 ynjF Shigella flexneri 2002017 putative cytochrome oxidase YP_005727160.1 1564856 D 591020 CDS YP_005727161.1 384543099 12316278 complement(1566864..1567517) 1 NC_017328.1 ATPase 1567517 ynjD 12316278 ynjD Shigella flexneri 2002017 ATPase YP_005727161.1 1566864 R 591020 CDS YP_005727162.1 384543100 12316279 1569880..1571235 1 NC_017328.1 IS4 ORF 1571235 12316279 SFxv_1661 Shigella flexneri 2002017 IS4 ORF YP_005727162.1 1569880 D 591020 CDS YP_005727163.1 384543101 12316280 complement(1571581..1572129) 1 NC_017328.1 Carboxymuconolactone decarboxylase family protein 1572129 ynjA 12316280 ynjA Shigella flexneri 2002017 Carboxymuconolactone decarboxylase family protein YP_005727163.1 1571581 R 591020 CDS YP_005727164.1 384543102 12316281 complement(1572129..1572836) 1 NC_017328.1 hypothetical protein 1572836 ydjZ 12316281 ydjZ Shigella flexneri 2002017 hypothetical protein YP_005727164.1 1572129 R 591020 CDS YP_005727165.1 384543103 12316282 complement(1572851..1573693) 1 NC_017328.1 hypothetical protein 1573693 12316282 SFxv_1665 Shigella flexneri 2002017 hypothetical protein YP_005727165.1 1572851 R 591020 CDS YP_005727166.1 384543104 12316283 complement(1574413..1575219) 1 NC_017328.1 Exonuclease III 1575219 xthA 12316283 xthA Shigella flexneri 2002017 Exonuclease III YP_005727166.1 1574413 R 591020 CDS YP_005727167.1 384543105 12316284 complement(1575232..1575402) 1 NC_017328.1 hypothetical protein 1575402 12316284 SFxv_1667 Shigella flexneri 2002017 hypothetical protein YP_005727167.1 1575232 R 591020 CDS YP_005727168.1 384543106 12316286 1576882..1577916 1 NC_017328.1 Arginine N-succinyltransferase 1577916 astA 12316286 astA Shigella flexneri 2002017 Arginine N-succinyltransferase YP_005727168.1 1576882 D 591020 CDS YP_005727169.1 384543107 12316287 1577913..1579391 1 NC_017328.1 N-succinylglutamate 5-semialdehyde dehydrogenase 1579391 astD 12316287 astD Shigella flexneri 2002017 N-succinylglutamate 5-semialdehyde dehydrogenase YP_005727169.1 1577913 D 591020 CDS YP_005727170.1 384543108 12316289 1580810..1581682 1 NC_017328.1 succinylglutamate desuccinylase 1581682 astE-2 12316289 astE-2 Shigella flexneri 2002017 succinylglutamate desuccinylase YP_005727170.1 1580810 D 591020 CDS YP_005727171.1 384543109 12316290 1582012..1582497 1 NC_017328.1 Spheroplast protein Y 1582497 spy 12316290 spy Shigella flexneri 2002017 Spheroplast protein Y YP_005727171.1 1582012 D 591020 CDS YP_005727172.1 384543110 12316291 1582637..1583275 1 NC_017328.1 Protein ves 1583275 ves 12316291 ves Shigella flexneri 2002017 Protein ves YP_005727172.1 1582637 D 591020 CDS YP_005727173.1 384543111 12316292 complement(1583235..1584122) 1 NC_017328.1 Excinuclease cho 1584122 cho 12316292 cho Shigella flexneri 2002017 Excinuclease cho YP_005727173.1 1583235 R 591020 CDS YP_005727174.1 384543112 12316293 complement(1584352..1585179) 1 NC_017328.1 NH(3)-dependent NAD(+) synthetase 1585179 nadE 12316293 nadE Shigella flexneri 2002017 NH(3)-dependent NAD(+) synthetase YP_005727174.1 1584352 R 591020 CDS YP_005727175.1 384543113 12316294 1585381..1585719 1 NC_017328.1 Osmotically-inducible lipoprotein E 1585719 osmE 12316294 osmE Shigella flexneri 2002017 Osmotically-inducible lipoprotein E YP_005727175.1 1585381 D 591020 CDS YP_005727176.1 384543114 12316295 1586018..1586338 1 NC_017328.1 PEP-dependent phosphotransferase enzyme IV for cellobiose, arbutin, and salicin 1586338 chbB 12316295 chbB Shigella flexneri 2002017 PEP-dependent phosphotransferase enzyme IV for cellobiose, arbutin, and salicin YP_005727176.1 1586018 D 591020 CDS YP_005727177.1 384543115 12316296 1586701..1587771 1 NC_017328.1 PEP-dependent phosphotransferase enzyme II for cellobiose, arbutin, and salicin 1587771 chbC 12316296 chbC Shigella flexneri 2002017 PEP-dependent phosphotransferase enzyme II for cellobiose, arbutin, and salicin YP_005727177.1 1586701 D 591020 CDS YP_005727178.1 384543116 12316297 1587725..1588180 1 NC_017328.1 N,N-diacetylchitobiose-specific phosphotransferase enzyme IIA component 1588180 chbA 12316297 chbA Shigella flexneri 2002017 N,N-diacetylchitobiose-specific phosphotransferase enzyme IIA component YP_005727178.1 1587725 D 591020 CDS YP_005727179.1 384543117 12316298 1588188..1588703 1 NC_017328.1 ChbR 1588703 chbR 12316298 chbR Shigella flexneri 2002017 ChbR YP_005727179.1 1588188 D 591020 CDS YP_005727180.1 384543118 12316299 complement(1588880..1589383) 1 NC_017328.1 IS1 transposase 1589383 12316299 SFxv_1682 Shigella flexneri 2002017 IS1 transposase YP_005727180.1 1588880 R 591020 CDS YP_005727181.1 384543119 12316300 1589497..1589673 1 NC_017328.1 IS150 ORF1 1589673 12316300 SFxv_1683 Shigella flexneri 2002017 IS150 ORF1 YP_005727181.1 1589497 D 591020 CDS YP_005727182.1 384543120 12316302 complement(1591247..1591849) 1 NC_017328.1 Inner membrane protein ydjM precursor 1591849 ydjM 12316302 ydjM Shigella flexneri 2002017 Inner membrane protein ydjM precursor YP_005727182.1 1591247 R 591020 CDS YP_005727183.1 384543121 12316303 complement(1592000..1592668) 1 NC_017328.1 putative phosphatase/phosphohexomutase 1592668 yniC 12316303 yniC Shigella flexneri 2002017 putative phosphatase/phosphohexomutase YP_005727183.1 1592000 R 591020 CDS YP_005727184.1 384543122 12316304 1592815..1593351 1 NC_017328.1 putative inner membrane protein 1593351 yniB 12316304 yniB Shigella flexneri 2002017 putative inner membrane protein YP_005727184.1 1592815 D 591020 CDS YP_005727185.1 384543123 12316305 complement(1593392..1594252) 1 NC_017328.1 putative phosphotransferase/kinase 1594252 yniA 12316305 yniA Shigella flexneri 2002017 putative phosphotransferase/kinase YP_005727185.1 1593392 R 591020 CDS YP_005727186.1 384543124 12316306 complement(1594358..1594648) 1 NC_017328.1 hypothetical protein 1594648 12316306 SFxv_1689 Shigella flexneri 2002017 hypothetical protein YP_005727186.1 1594358 R 591020 CDS YP_005727187.1 384543125 12316307 complement(1594749..1595462) 1 NC_017328.1 6-phosphofructokinase 1595462 pfkB 12316307 pfkB Shigella flexneri 2002017 6-phosphofructokinase YP_005727187.1 1594749 R 591020 CDS YP_005727188.1 384543126 12316308 1595965..1596723 1 NC_017328.1 hypothetical protein 1596723 12316308 SFxv_1691 Shigella flexneri 2002017 hypothetical protein YP_005727188.1 1595965 D 591020 CDS YP_005727189.1 384543127 12316309 complement(1596776..1596994) 1 NC_017328.1 hypothetical protein 1596994 12316309 SFxv_1692 Shigella flexneri 2002017 hypothetical protein YP_005727189.1 1596776 R 591020 CDS YP_005727190.1 384543128 12316310 complement(1597473..1597946) 1 NC_017328.1 Ankyrin repeat protein B 1597946 12316310 SFxv_1693 Shigella flexneri 2002017 Ankyrin repeat protein B YP_005727190.1 1597473 R 591020 CDS YP_005727191.1 384543129 12316311 complement(1598030..1598533) 1 NC_017328.1 IS1 transposase 1598533 12316311 SFxv_1694 Shigella flexneri 2002017 IS1 transposase YP_005727191.1 1598030 R 591020 CDS YP_005727192.1 384543130 12316312 1598647..1598826 1 NC_017328.1 IS150 ORF1 1598826 12316312 SFxv_1695 Shigella flexneri 2002017 IS150 ORF1 YP_005727192.1 1598647 D 591020 CDS YP_005727193.1 384543131 12316313 complement(1598845..1599162) 1 NC_017328.1 ankyrin repeat protein B 1599162 12316313 SFxv_1695a Shigella flexneri 2002017 ankyrin repeat protein B YP_005727193.1 1598845 R 591020 CDS YP_005727194.1 384543132 12316314 1599686..1601614 1 NC_017328.1 Threonyl-tRNA synthetase 1601614 thrS 12316314 thrS Shigella flexneri 2002017 Threonyl-tRNA synthetase YP_005727194.1 1599686 D 591020 CDS YP_005727195.1 384543133 12316315 1601726..1602160 1 NC_017328.1 translation initiation factor IF-3 1602160 infC 12316315 infC Shigella flexneri 2002017 translation initiation factor IF-3 YP_005727195.1 1601726 D 591020 CDS YP_005727196.1 384543134 12316316 1602242..1602454 1 NC_017328.1 50S ribosomal protein L35 1602454 rpmI 12316316 rpmI Shigella flexneri 2002017 50S ribosomal protein L35 YP_005727196.1 1602242 D 591020 CDS YP_005727197.1 384543135 12316317 1602507..1602863 1 NC_017328.1 50S ribosomal protein L20 1602863 rplT 12316317 rplT Shigella flexneri 2002017 50S ribosomal protein L20 YP_005727197.1 1602507 D 591020 CDS YP_005727198.1 384543136 12316318 1603313..1604296 1 NC_017328.1 phenylalanyl-tRNA synthetase subunit alpha 1604296 pheS 12316318 pheS Shigella flexneri 2002017 phenylalanyl-tRNA synthetase subunit alpha YP_005727198.1 1603313 D 591020 CDS YP_005727199.1 384543137 12316319 1604311..1606698 1 NC_017328.1 phenylalanyl-tRNA synthetase subunit beta 1606698 pheT 12316319 pheT Shigella flexneri 2002017 phenylalanyl-tRNA synthetase subunit beta YP_005727199.1 1604311 D 591020 CDS YP_005727200.1 384543138 12316320 1606703..1607002 1 NC_017328.1 Integration host factor subunit alpha 1607002 ihfA 12316320 ihfA Shigella flexneri 2002017 Integration host factor subunit alpha YP_005727200.1 1606703 D 591020 CDS YP_005727201.1 384543139 12316321 1607103..1608083 1 NC_017328.1 Vitamin B12 import system permease protein btuC 1608083 btuC 12316321 btuC Shigella flexneri 2002017 Vitamin B12 import system permease protein btuC YP_005727201.1 1607103 D 591020 CDS YP_005727202.1 384543140 12316322 1608146..1608697 1 NC_017328.1 glutathione peroxidase 1608697 btuE 12316322 btuE Shigella flexneri 2002017 glutathione peroxidase YP_005727202.1 1608146 D 591020 CDS YP_005727203.1 384543141 12316323 1608697..1609446 1 NC_017328.1 putative ABC-type cobalamin transport system, ATPase component 1609446 btuD 12316323 btuD Shigella flexneri 2002017 putative ABC-type cobalamin transport system, ATPase component YP_005727203.1 1608697 D 591020 CDS YP_005727204.1 384543142 12316324 1609524..1609988 1 NC_017328.1 Lipoprotein 1609988 nlpC 12316324 nlpC Shigella flexneri 2002017 Lipoprotein YP_005727204.1 1609524 D 591020 CDS YP_005727205.1 384543143 12316325 1610235..1610948 1 NC_017328.1 hypothetical protein 1610948 12316325 SFxv_1707 Shigella flexneri 2002017 hypothetical protein YP_005727205.1 1610235 D 591020 CDS YP_005727206.1 384543144 12316326 1610958..1612448 1 NC_017328.1 hypothetical protein 1612448 12316326 SFxv_1708 Shigella flexneri 2002017 hypothetical protein YP_005727206.1 1610958 D 591020 CDS YP_005727207.1 384543145 12316327 complement(1612452..1612670) 1 NC_017328.1 putative hemin uptake protein 1612670 ydiE 12316327 ydiE Shigella flexneri 2002017 putative hemin uptake protein YP_005727207.1 1612452 R 591020 CDS YP_005727208.1 384543146 12316328 complement(1612775..1613821) 1 NC_017328.1 Phospho-2-dehydro-3-deoxyheptonate aldolase, Trp-sensitive 1613821 aroH 12316328 aroH Shigella flexneri 2002017 Phospho-2-dehydro-3-deoxyheptonate aldolase, Trp-sensitive YP_005727208.1 1612775 R 591020 CDS YP_005727209.1 384543147 12316329 complement(1613978..1614811) 1 NC_017328.1 protein ydiA 1614811 ydiA 12316329 ydiA Shigella flexneri 2002017 protein ydiA YP_005727209.1 1613978 R 591020 CDS YP_005727210.1 384543148 12316330 1615143..1617521 1 NC_017328.1 phosphoenolpyruvate synthase 1617521 pps 12316330 pps Shigella flexneri 2002017 phosphoenolpyruvate synthase YP_005727210.1 1615143 D 591020 CDS YP_005727211.1 384543149 12316331 complement(1617578..1619278) 1 NC_017328.1 AMP-dependent synthetase and ligase 1619278 fadK 12316331 fadK Shigella flexneri 2002017 AMP-dependent synthetase and ligase YP_005727211.1 1617578 R 591020 CDS YP_005727212.1 384543150 12316332 complement(1619281..1619574) 1 NC_017328.1 Iron-sulfur cluster-binding protein 1619574 ydiT 12316332 ydiT Shigella flexneri 2002017 Iron-sulfur cluster-binding protein YP_005727212.1 1619281 R 591020 CDS YP_005727213.1 384543151 12316333 complement(1619571..1620860) 1 NC_017328.1 putative electron transfer flavoprotein-quinone oxidoreductase ydiS 1620860 ydiS 12316333 ydiS Shigella flexneri 2002017 putative electron transfer flavoprotein-quinone oxidoreductase ydiS YP_005727213.1 1619571 R 591020 CDS YP_005727214.1 384543152 12316334 complement(1620916..1621854) 1 NC_017328.1 putative Electron transfer flavoprotein, alpha subunit 1621854 ydiR 12316334 ydiR Shigella flexneri 2002017 putative Electron transfer flavoprotein, alpha subunit YP_005727214.1 1620916 R 591020 CDS YP_005727215.1 384543153 12316335 complement(1621874..1622638) 1 NC_017328.1 electron transfer flavoprotein subunit beta 1622638 ydiQ 12316335 ydiQ Shigella flexneri 2002017 electron transfer flavoprotein subunit beta YP_005727215.1 1621874 R 591020 CDS YP_005727216.1 384543154 12316336 1622958..1623458 1 NC_017328.1 putative ARAC-type regulatory protein 1623458 ydiP 12316336 ydiP Shigella flexneri 2002017 putative ARAC-type regulatory protein YP_005727216.1 1622958 D 591020 CDS YP_005727217.1 384543155 12316337 1623686..1624189 1 NC_017328.1 IS1 ORF2 1624189 12316337 SFxv_1719 Shigella flexneri 2002017 IS1 ORF2 YP_005727217.1 1623686 D 591020 CDS YP_005727218.1 384543156 12316338 complement(1624183..1624350) 1 NC_017328.1 putative sulfatase YdeN 1624350 ydeN-1 12316338 ydeN-1 Shigella flexneri 2002017 putative sulfatase YdeN YP_005727218.1 1624183 R 591020 CDS YP_005727219.1 384543157 12316339 complement(1624752..1625513) 1 NC_017328.1 HTH-type transcriptional regulator ydeO 1625513 ydeO 12316339 ydeO Shigella flexneri 2002017 HTH-type transcriptional regulator ydeO YP_005727219.1 1624752 R 591020 CDS YP_005727220.1 384543158 12316340 complement(1625581..1625784) 1 NC_017328.1 hypothetical protein 1625784 12316340 SFxv_1722 Shigella flexneri 2002017 hypothetical protein YP_005727220.1 1625581 R 591020 CDS YP_005727221.1 384543159 12316341 complement(1626032..1628311) 1 NC_017328.1 putative oxidoreductase, major subunit 1628311 ydeP 12316341 ydeP Shigella flexneri 2002017 putative oxidoreductase, major subunit YP_005727221.1 1626032 R 591020 CDS YP_005727222.1 384543160 12316342 complement(1628645..1629394) 1 NC_017328.1 putative adhesin 1629394 ydeQ 12316342 ydeQ Shigella flexneri 2002017 putative adhesin YP_005727222.1 1628645 R 591020 CDS YP_005727223.1 384543161 12316343 complement(1629354..1629569) 1 NC_017328.1 putative integrase 1629569 12316343 SFxv_1725 Shigella flexneri 2002017 putative integrase YP_005727223.1 1629354 R 591020 CDS YP_005727224.1 384543162 12316344 1629644..1630201 1 NC_017328.1 IS1 ORF2 1630201 12316344 SFxv_1726 Shigella flexneri 2002017 IS1 ORF2 YP_005727224.1 1629644 D 591020 CDS YP_005727225.1 384543163 12316345 1630251..1631069 1 NC_017328.1 IS600 ORF2 1631069 12316345 SFxv_1727 Shigella flexneri 2002017 IS600 ORF2 YP_005727225.1 1630251 D 591020 CDS YP_005727226.1 384543164 12316346 complement(1631094..1631273) 1 NC_017328.1 Lysis protein S 1631273 12316346 SFxv_1728 Shigella flexneri 2002017 Lysis protein S YP_005727226.1 1631094 R 591020 CDS YP_005727227.1 384543165 12316347 complement(1631423..1631584) 1 NC_017328.1 hypothetical protein 1631584 12316347 SFxv_1729 Shigella flexneri 2002017 hypothetical protein YP_005727227.1 1631423 R 591020 CDS YP_005727228.1 384543166 12316348 1632029..1632364 1 NC_017328.1 Enhancing lycopene biosynthesis protein 1 1632364 12316348 SFxv_1730 Shigella flexneri 2002017 Enhancing lycopene biosynthesis protein 1 YP_005727228.1 1632029 D 591020 CDS YP_005727229.1 384543167 12316351 complement(1633674..1634495) 1 NC_017328.1 Antitermination protein 1634495 12316351 SFxv_1731 Shigella flexneri 2002017 Antitermination protein YP_005727229.1 1633674 R 591020 CDS YP_005727230.1 384543168 12316352 complement(1634510..1634866) 1 NC_017328.1 Endodeoxyribonuclease RUS 1634866 12316352 SFxv_1732 Shigella flexneri 2002017 Endodeoxyribonuclease RUS YP_005727230.1 1634510 R 591020 CDS YP_005727231.1 384543169 12316353 complement(1634879..1635928) 1 NC_017328.1 hypothetical protein 1635928 12316353 SFxv_1733 Shigella flexneri 2002017 hypothetical protein YP_005727231.1 1634879 R 591020 CDS YP_005727232.1 384543170 12316354 complement(1636275..1636526) 1 NC_017328.1 hypothetical protein 1636526 12316354 SFxv_1734 Shigella flexneri 2002017 hypothetical protein YP_005727232.1 1636275 R 591020 CDS YP_005727233.1 384543171 12316355 complement(1636589..1636705) 1 NC_017328.1 hypothetical protein 1636705 12316355 SFxv_1735 Shigella flexneri 2002017 hypothetical protein YP_005727233.1 1636589 R 591020 CDS YP_005727234.1 384543172 12316356 complement(1636744..1636899) 1 NC_017328.1 putative cell killing protein 1636899 12316356 SFxv_1736 Shigella flexneri 2002017 putative cell killing protein YP_005727234.1 1636744 R 591020 CDS YP_005727235.1 384543173 12316357 complement(1636971..1637258) 1 NC_017328.1 Toxin relE 1637258 12316357 SFxv_1737 Shigella flexneri 2002017 Toxin relE YP_005727235.1 1636971 R 591020 CDS YP_005727236.1 384543174 12316358 complement(1637258..1637497) 1 NC_017328.1 Antitoxin RelB 1637497 12316358 SFxv_1738 Shigella flexneri 2002017 Antitoxin RelB YP_005727236.1 1637258 R 591020 CDS YP_005727237.1 384543175 12316359 1637549..1637827 1 NC_017328.1 hypothetical protein 1637827 12316359 SFxv_1738a Shigella flexneri 2002017 hypothetical protein YP_005727237.1 1637549 D 591020 CDS YP_005727238.1 384543176 12316360 complement(1637824..1638642) 1 NC_017328.1 IS600 ORF2 1638642 12316360 SFxv_1739 Shigella flexneri 2002017 IS600 ORF2 YP_005727238.1 1637824 R 591020 CDS YP_005727239.1 384543177 12316361 1639051..1640061 1 NC_017328.1 Inner membrane metabolite transport protein ydfJ 1640061 12316361 SFxv_1740 Shigella flexneri 2002017 Inner membrane metabolite transport protein ydfJ YP_005727239.1 1639051 D 591020 CDS YP_005727240.1 384543178 12316362 1640150..1641610 1 NC_017328.1 putative oxidoreductase 1641610 ydfI 12316362 ydfI Shigella flexneri 2002017 putative oxidoreductase YP_005727240.1 1640150 D 591020 CDS YP_005727241.1 384543179 12316363 complement(1641646..1641849) 1 NC_017328.1 putative selenoprotein ydfZ 1641849 ydfZ 12316363 ydfZ Shigella flexneri 2002017 putative selenoprotein ydfZ YP_005727241.1 1641646 R 591020 CDS YP_005727242.1 384543180 12316364 complement(1642027..1642713) 1 NC_017328.1 putative transcriptional regulator 1642713 ydfH 12316364 ydfH Shigella flexneri 2002017 putative transcriptional regulator YP_005727242.1 1642027 R 591020 CDS YP_005727243.1 384543181 12316365 complement(1642802..1643548) 1 NC_017328.1 NADP-dependent L-serine/L-allo-threonine dehydrogenase ydfG 1643548 ydfG 12316365 ydfG Shigella flexneri 2002017 NADP-dependent L-serine/L-allo-threonine dehydrogenase ydfG YP_005727243.1 1642802 R 591020 CDS YP_005727244.1 384543182 12316366 1643919..1645730 1 NC_017328.1 Dipeptidyl carboxypeptidase II 1645730 dcp 12316366 dcp Shigella flexneri 2002017 Dipeptidyl carboxypeptidase II YP_005727244.1 1643919 D 591020 CDS YP_005727245.1 384543183 12316367 complement(1645775..1646293) 1 NC_017328.1 competence damage-inducible protein A 1646293 ydeJ 12316367 ydeJ Shigella flexneri 2002017 competence damage-inducible protein A YP_005727245.1 1645775 R 591020 CDS YP_005727246.1 384543184 12316368 1646569..1646802 1 NC_017328.1 hypothetical protein 1646802 12316368 SFxv_1747 Shigella flexneri 2002017 hypothetical protein YP_005727246.1 1646569 D 591020 CDS YP_005727247.1 384543185 12316369 1647197..1648015 1 NC_017328.1 IS600 ORF2 1648015 12316369 SFxv_1748 Shigella flexneri 2002017 IS600 ORF2 YP_005727247.1 1647197 D 591020 CDS YP_005727248.1 384543186 12316370 complement(1648263..1648358) 1 NC_017328.1 hypothetical protein 1648358 12316370 SFxv_1749 Shigella flexneri 2002017 hypothetical protein YP_005727248.1 1648263 R 591020 CDS YP_005727249.1 384543187 12316371 complement(1648485..1649603) 1 NC_017328.1 putative permeases of the major facilitator superfamily 1649603 ydeE 12316371 ydeE Shigella flexneri 2002017 putative permeases of the major facilitator superfamily YP_005727249.1 1648485 R 591020 CDS YP_005727250.1 384543188 12316372 1649867..1650766 1 NC_017328.1 putative amino-acid metabolite efflux pump 1650766 eamA 12316372 eamA Shigella flexneri 2002017 putative amino-acid metabolite efflux pump YP_005727250.1 1649867 D 591020 CDS YP_005727251.1 384543189 12316373 complement(1650797..1651015) 1 NC_017328.1 Multiple antibiotic resistance protein 1651015 marB 12316373 marB Shigella flexneri 2002017 Multiple antibiotic resistance protein YP_005727251.1 1650797 R 591020 CDS YP_005727252.1 384543190 12316374 complement(1651047..1651490) 1 NC_017328.1 Multiple antibiotic resistance protein marA 1651490 marA 12316374 marA Shigella flexneri 2002017 Multiple antibiotic resistance protein marA YP_005727252.1 1651047 R 591020 CDS YP_005727253.1 384543191 12316375 complement(1651450..1651884) 1 NC_017328.1 Multiple antibiotic resistance protein marR 1651884 marR 12316375 marR Shigella flexneri 2002017 Multiple antibiotic resistance protein marR YP_005727253.1 1651450 R 591020 CDS YP_005727254.1 384543192 12316376 1652092..1652757 1 NC_017328.1 Multiple antibiotic resistance protein marC 1652757 marC 12316376 marC Shigella flexneri 2002017 Multiple antibiotic resistance protein marC YP_005727254.1 1652092 D 591020 CDS YP_005727255.1 384543193 12316377 complement(1652782..1653972) 1 NC_017328.1 putative arabinose efflux permease 1653972 ydeA 12316377 ydeA Shigella flexneri 2002017 putative arabinose efflux permease YP_005727255.1 1652782 R 591020 CDS YP_005727256.1 384543194 12316378 1654049..1654168 1 NC_017328.1 hypothetical protein 1654168 12316378 SFxv_1757 Shigella flexneri 2002017 hypothetical protein YP_005727256.1 1654049 D 591020 CDS YP_005727257.1 384543195 12316379 complement(1654122..1655237) 1 NC_017328.1 hypothetical protein 1655237 12316379 SFxv_1758 Shigella flexneri 2002017 hypothetical protein YP_005727257.1 1654122 R 591020 CDS YP_005727258.1 384543196 12316380 1655317..1656252 1 NC_017328.1 putative NAD-dependent aldehyde dehydrogenase 1656252 sad 12316380 sad Shigella flexneri 2002017 putative NAD-dependent aldehyde dehydrogenase YP_005727258.1 1655317 D 591020 CDS YP_005727259.1 384543197 12316381 1656316..1657242 1 NC_017328.1 Glutaminase 2 1657242 yneH 12316381 yneH Shigella flexneri 2002017 Glutaminase 2 YP_005727259.1 1656316 D 591020 CDS YP_005727260.1 384543198 12316382 1657242..1657586 1 NC_017328.1 hypothetical protein 1657586 yneG 12316382 yneG Shigella flexneri 2002017 hypothetical protein YP_005727260.1 1657242 D 591020 CDS YP_005727261.1 384543199 12316383 1657740..1659158 1 NC_017328.1 Diguanylate cyclase (GGDEF) domain protein 1659158 yneF 12316383 yneF Shigella flexneri 2002017 Diguanylate cyclase (GGDEF) domain protein YP_005727261.1 1657740 D 591020 CDS YP_005727262.1 384543200 12316384 1659385..1660836 1 NC_017328.1 putative mannitol-1-phosphate/altronate dehydrogenase 1660836 uxaB 12316384 uxaB Shigella flexneri 2002017 putative mannitol-1-phosphate/altronate dehydrogenase YP_005727262.1 1659385 D 591020 CDS YP_005727263.1 384543201 12316385 1661130..1661528 1 NC_017328.1 putative IS1294 ORF 1661528 12316385 SFxv_1764 Shigella flexneri 2002017 putative IS1294 ORF YP_005727263.1 1661130 D 591020 CDS YP_005727264.1 384543202 12316386 complement(1661507..1662331) 1 NC_017328.1 IS1294 ORF 1662331 12316386 SFxv_1766 Shigella flexneri 2002017 IS1294 ORF YP_005727264.1 1661507 R 591020 CDS YP_005727265.1 384543203 12316387 complement(1662341..1662529) 1 NC_017328.1 fragment; IS1294 orf 1662529 12316387 SFxv_1767 Shigella flexneri 2002017 IS1294 orf YP_005727265.1 1662341 R 591020 CDS YP_005727266.1 384543204 12316388 1662679..1663644 1 NC_017328.1 hypothetical protein 1663644 12316388 SFxv_1768 Shigella flexneri 2002017 hypothetical protein YP_005727266.1 1662679 D 591020 CDS YP_005727267.1 384543205 12316389 complement(1663648..1664406) 1 NC_017328.1 Trans-aconitate 2-methyltransferase 1664406 tam 12316389 tam Shigella flexneri 2002017 Trans-aconitate 2-methyltransferase YP_005727267.1 1663648 R 591020 CDS YP_005727268.1 384543206 12316390 complement(1664446..1664736) 1 NC_017328.1 autoinducer-2 (AI-2) modifying protein LsrG 1664736 lsrG 12316390 lsrG Shigella flexneri 2002017 autoinducer-2 (AI-2) modifying protein LsrG YP_005727268.1 1664446 R 591020 CDS YP_005727269.1 384543207 12316391 complement(1664760..1665530) 1 NC_017328.1 putative DhnA-type fructose-1,6-bisphosphate aldolase-like enzyme 1665530 lsrF-1 12316391 lsrF-1 Shigella flexneri 2002017 putative DhnA-type fructose-1,6-bisphosphate aldolase-like enzyme YP_005727269.1 1664760 R 591020 CDS YP_005727270.1 384543208 12316392 complement(1665555..1666460) 1 NC_017328.1 IS2 ORF2 1666460 12316392 SFxv_1774 Shigella flexneri 2002017 IS2 ORF2 YP_005727270.1 1665555 R 591020 CDS YP_005727271.1 384543209 12316393 1665984..1666415 1 NC_017328.1 putative IS2 ORF 1666415 12316393 SFxv_1772 Shigella flexneri 2002017 putative IS2 ORF YP_005727271.1 1665984 D 591020 CDS YP_005727272.1 384543210 12316394 complement(1666418..1666603) 1 NC_017328.1 IS2 ORF1 1666603 12316394 SFxv_1775 Shigella flexneri 2002017 IS2 ORF1 YP_005727272.1 1666418 R 591020 CDS YP_005727273.1 384543211 12316395 1666448..1666648 1 NC_017328.1 hypothetical protein 1666648 12316395 SFxv_1773 Shigella flexneri 2002017 hypothetical protein YP_005727273.1 1666448 D 591020 CDS YP_005727274.1 384543212 12316396 complement(1666973..1667875) 1 NC_017328.1 Carbohydrate kinase, FGGY 1667875 lsrK 12316396 lsrK Shigella flexneri 2002017 Carbohydrate kinase, FGGY YP_005727274.1 1666973 R 591020 CDS YP_005727275.1 384543213 12316397 complement(1667954..1668907) 1 NC_017328.1 putative sorC family transcriptional regulator 1668907 lsrR 12316397 lsrR Shigella flexneri 2002017 putative sorC family transcriptional regulator YP_005727275.1 1667954 R 591020 CDS YP_005727276.1 384543214 12316398 1669156..1670691 1 NC_017328.1 ATPase 1670691 lsrA 12316398 lsrA Shigella flexneri 2002017 ATPase YP_005727276.1 1669156 D 591020 CDS YP_005727277.1 384543215 12316399 1670685..1671713 1 NC_017328.1 Inner membrane ABC transporter permease protein ydeY 1671713 lsrC 12316399 lsrC Shigella flexneri 2002017 Inner membrane ABC transporter permease protein ydeY YP_005727277.1 1670685 D 591020 CDS YP_005727278.1 384543216 12316400 1671713..1672705 1 NC_017328.1 putative Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 1672705 lsrD 12316400 lsrD Shigella flexneri 2002017 putative Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components YP_005727278.1 1671713 D 591020 CDS YP_005727279.1 384543217 12316402 1673767..1673913 1 NC_017328.1 Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase 1673913 lsrF-2 12316402 lsrF-2 Shigella flexneri 2002017 Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase YP_005727279.1 1673767 D 591020 CDS YP_005727280.1 384543218 12316403 1673955..1674320 1 NC_017328.1 IS2 ORF1 1674320 12316403 SFxv_1783 Shigella flexneri 2002017 IS2 ORF1 YP_005727280.1 1673955 D 591020 CDS YP_005727281.1 384543219 12316404 1674278..1675183 1 NC_017328.1 IS2 ORF2 1675183 12316404 SFxv_1784 Shigella flexneri 2002017 IS2 ORF2 YP_005727281.1 1674278 D 591020 CDS YP_005727282.1 384543220 12316405 complement(1674323..1674754) 1 NC_017328.1 putative IS2 ORF 1674754 12316405 SFxv_1786 Shigella flexneri 2002017 putative IS2 ORF YP_005727282.1 1674323 R 591020 CDS YP_005727283.1 384543221 12316406 complement(1675233..1676045) 1 NC_017328.1 ISEhe3, transposase orfB 1676045 12316406 SFxv_1787 Shigella flexneri 2002017 ISEhe3, transposase orfB YP_005727283.1 1675233 R 591020 CDS YP_005727284.1 384543222 12316407 complement(1676102..1676386) 1 NC_017328.1 putative transposase ykgN 1676386 12316407 SFxv_1788 Shigella flexneri 2002017 putative transposase ykgN YP_005727284.1 1676102 R 591020 CDS YP_005727285.1 384543223 12316408 complement(1676457..1677671) 1 NC_017328.1 Starvation sensing protein 1677671 rspA 12316408 rspA Shigella flexneri 2002017 Starvation sensing protein YP_005727285.1 1676457 R 591020 CDS YP_005727286.1 384543224 12316409 complement(1677877..1678212) 1 NC_017328.1 membrane protein ynfA 1678212 ynfA 12316409 ynfA Shigella flexneri 2002017 membrane protein ynfA YP_005727286.1 1677877 R 591020 CDS YP_005727287.1 384543225 12316410 1678338..1678679 1 NC_017328.1 hypothetical protein 1678679 ynfB 12316410 ynfB Shigella flexneri 2002017 hypothetical protein YP_005727287.1 1678338 D 591020 CDS YP_005727288.1 384543226 12316411 1678894..1679274 1 NC_017328.1 Spermidine N(1)-acetyltransferase 1679274 speG 12316411 speG Shigella flexneri 2002017 Spermidine N(1)-acetyltransferase YP_005727288.1 1678894 D 591020 CDS YP_005727289.1 384543227 12316412 complement(1679029..1679277) 1 NC_017328.1 hypothetical protein 1679277 12316412 SFxv_1793 Shigella flexneri 2002017 hypothetical protein YP_005727289.1 1679029 R 591020 CDS YP_005727290.1 384543228 12316413 complement(1679277..1680023) 1 NC_017328.1 putative lipoprotein 1680023 ynfC 12316413 ynfC Shigella flexneri 2002017 putative lipoprotein YP_005727290.1 1679277 R 591020 CDS YP_005727291.1 384543229 12316414 1680053..1680400 1 NC_017328.1 hypothetical protein 1680400 12316414 SFxv_1795 Shigella flexneri 2002017 hypothetical protein YP_005727291.1 1680053 D 591020 CDS YP_005727292.1 384543230 12316416 complement(1682743..1683732) 1 NC_017328.1 hypothetical protein 1683732 12316416 SFxv_1797 Shigella flexneri 2002017 hypothetical protein YP_005727292.1 1682743 R 591020 CDS YP_005727293.1 384543231 12316417 complement(1683817..1684308) 1 NC_017328.1 hypothetical protein 1684308 12316417 SFxv_1798 Shigella flexneri 2002017 hypothetical protein YP_005727293.1 1683817 R 591020 CDS YP_005727294.1 384543232 12316418 complement(1684629..1685129) 1 NC_017328.1 hypothetical protein 1685129 12316418 SFxv_1799 Shigella flexneri 2002017 hypothetical protein YP_005727294.1 1684629 R 591020 CDS YP_005727295.1 384543233 12316419 complement(1685119..1685634) 1 NC_017328.1 hypothetical protein 1685634 12316419 SFxv_1800 Shigella flexneri 2002017 hypothetical protein YP_005727295.1 1685119 R 591020 CDS YP_005727296.1 384543234 12316420 complement(1686065..1686433) 1 NC_017328.1 hypothetical protein 1686433 12316420 SFxv_1801 Shigella flexneri 2002017 hypothetical protein YP_005727296.1 1686065 R 591020 CDS YP_005727297.1 384543235 12316421 complement(1686845..1687330) 1 NC_017328.1 putative integrase 1687330 12316421 SFxv_1802 Shigella flexneri 2002017 putative integrase YP_005727297.1 1686845 R 591020 CDS YP_005727298.1 384543236 12316422 complement(1687402..1688241) 1 NC_017328.1 IS911 ORF2 1688241 12316422 SFxv_1803 Shigella flexneri 2002017 IS911 ORF2 YP_005727298.1 1687402 R 591020 CDS YP_005727299.1 384543237 12316423 complement(1688640..1689677) 1 NC_017328.1 putative integrase 1689677 12316423 SFxv_1804 Shigella flexneri 2002017 putative integrase YP_005727299.1 1688640 R 591020 CDS YP_005727300.1 384543238 12316424 1690857..1692674 1 NC_017328.1 putative dimethyl sulfoxide reductase chain ynfF precursor 1692674 ynfF 12316424 ynfF Shigella flexneri 2002017 putative dimethyl sulfoxide reductase chain ynfF precursor YP_005727300.1 1690857 D 591020 CDS YP_005727301.1 384543239 12316425 1692879..1693496 1 NC_017328.1 putative anaerobic dimethyl sulfoxide reductase chain ynfG 1693496 ynfG 12316425 ynfG Shigella flexneri 2002017 putative anaerobic dimethyl sulfoxide reductase chain ynfG YP_005727301.1 1692879 D 591020 CDS YP_005727302.1 384543240 12316426 1693498..1694352 1 NC_017328.1 putative DMSO reductase anchor subunit 1694352 ynfH 12316426 ynfH Shigella flexneri 2002017 putative DMSO reductase anchor subunit YP_005727302.1 1693498 D 591020 CDS YP_005727303.1 384543241 12316427 1694395..1695009 1 NC_017328.1 Twin-arginine leader-binding protein dmsD 1695009 dmsD 12316427 dmsD Shigella flexneri 2002017 Twin-arginine leader-binding protein dmsD YP_005727303.1 1694395 D 591020 CDS YP_005727304.1 384543242 12316428 1695144..1696460 1 NC_017328.1 Voltage-gated ClC-type chloride channel clcB 1696460 clcB 12316428 clcB Shigella flexneri 2002017 Voltage-gated ClC-type chloride channel clcB YP_005727304.1 1695144 D 591020 CDS YP_005727305.1 384543243 12316429 complement(1696413..1697108) 1 NC_017328.1 Dethiobiotin synthase 1697108 ynfK 12316429 ynfK Shigella flexneri 2002017 Dethiobiotin synthase YP_005727305.1 1696413 R 591020 CDS YP_005727306.1 384543244 12316430 complement(1697233..1698453) 1 NC_017328.1 putative NAGC-like transcriptional regulator 1698453 dgsA 12316430 dgsA Shigella flexneri 2002017 putative NAGC-like transcriptional regulator YP_005727306.1 1697233 R 591020 CDS YP_005727307.1 384543245 12316431 complement(1698588..1699499) 1 NC_017328.1 putative LYSR-type transcriptional regulator 1699499 ynfL 12316431 ynfL Shigella flexneri 2002017 putative LYSR-type transcriptional regulator YP_005727307.1 1698588 R 591020 CDS YP_005727308.1 384543246 12316433 1701867..1702688 1 NC_017328.1 Peptidase, S1A (Chymotrypsin) family 1702688 ydgD 12316433 ydgD Shigella flexneri 2002017 Peptidase, S1A (Chymotrypsin) family YP_005727308.1 1701867 D 591020 CDS YP_005727309.1 384543247 12316434 complement(1702727..1703056) 1 NC_017328.1 Multidrug resistance protein mdtI 1703056 mdtI 12316434 mdtI Shigella flexneri 2002017 Multidrug resistance protein mdtI YP_005727309.1 1702727 R 591020 CDS YP_005727310.1 384543248 12316435 complement(1703043..1703408) 1 NC_017328.1 Multidrug resistance protein mdtJ 1703408 mdtJ 12316435 mdtJ Shigella flexneri 2002017 Multidrug resistance protein mdtJ YP_005727310.1 1703043 R 591020 CDS YP_005727311.1 384543249 12316436 1703819..1704853 1 NC_017328.1 putative permease 1704853 tqsA 12316436 tqsA Shigella flexneri 2002017 putative permease YP_005727311.1 1703819 D 591020 CDS YP_005727312.1 384543250 12316437 complement(1704878..1706266) 1 NC_017328.1 Pyridine nucleotide transhydrogenase subunit-beta 1706266 pntB 12316437 pntB Shigella flexneri 2002017 Pyridine nucleotide transhydrogenase subunit-beta YP_005727312.1 1704878 R 591020 CDS YP_005727313.1 384543251 12316438 complement(1706277..1707824) 1 NC_017328.1 Pyridine nucleotide transhydrogenase, alpha subunit 1707824 pntA 12316438 pntA Shigella flexneri 2002017 Pyridine nucleotide transhydrogenase, alpha subunit YP_005727313.1 1706277 R 591020 CDS YP_005727314.1 384543252 12316439 1708333..1709277 1 NC_017328.1 hypothetical protein 1709277 ydgH 12316439 ydgH Shigella flexneri 2002017 hypothetical protein YP_005727314.1 1708333 D 591020 CDS YP_005727315.1 384543253 12316440 1709463..1710845 1 NC_017328.1 putative arginine/ornithine antiporter 1710845 ydgI 12316440 ydgI Shigella flexneri 2002017 putative arginine/ornithine antiporter YP_005727315.1 1709463 D 591020 CDS YP_005727316.1 384543254 12316441 1710882..1711604 1 NC_017328.1 putative Dehydrogenase 1711604 folM 12316441 folM Shigella flexneri 2002017 putative Dehydrogenase YP_005727316.1 1710882 D 591020 CDS YP_005727317.1 384543255 12316442 complement(1711601..1711897) 1 NC_017328.1 putative Inner membrane protein 1711897 12316442 SFxv_1824 Shigella flexneri 2002017 putative Inner membrane protein YP_005727317.1 1711601 R 591020 CDS YP_005727318.1 384543256 12316443 1712005..1712808 1 NC_017328.1 Response transcriptional regulatory protein 1712808 rstA 12316443 rstA Shigella flexneri 2002017 Response transcriptional regulatory protein YP_005727318.1 1712005 D 591020 CDS YP_005727319.1 384543257 12316444 1713306..1714352 1 NC_017328.1 putative transporter 1714352 12316444 SFxv_1826 Shigella flexneri 2002017 putative transporter YP_005727319.1 1713306 D 591020 CDS YP_005727320.1 384543258 12316445 1714531..1715832 1 NC_017328.1 putative Sensor protein 1715832 rstB 12316445 rstB Shigella flexneri 2002017 putative Sensor protein YP_005727320.1 1714531 D 591020 CDS YP_005727321.1 384543259 12316446 1716118..1716837 1 NC_017328.1 DNA replication terminus site-binding protein 1716837 tus 12316446 tus Shigella flexneri 2002017 DNA replication terminus site-binding protein YP_005727321.1 1716118 D 591020 CDS YP_005727322.1 384543260 12316447 complement(1716834..1718237) 1 NC_017328.1 class II fumarate hydratase 1718237 fumC 12316447 fumC Shigella flexneri 2002017 class II fumarate hydratase YP_005727322.1 1716834 R 591020 CDS YP_005727323.1 384543261 12316448 complement(1718380..1720026) 1 NC_017328.1 fumarase A 1720026 fumA 12316448 fumA Shigella flexneri 2002017 fumarase A YP_005727323.1 1718380 R 591020 CDS YP_005727324.1 384543262 12316449 1720225..1721400 1 NC_017328.1 Mannose-6-phosphate isomerase 1721400 manA 12316449 manA Shigella flexneri 2002017 Mannose-6-phosphate isomerase YP_005727324.1 1720225 D 591020 CDS YP_005727325.1 384543263 12316450 1721501..1723009 1 NC_017328.1 Protein ydgA precursor 1723009 ydgA 12316450 ydgA Shigella flexneri 2002017 Protein ydgA precursor YP_005727325.1 1721501 D 591020 CDS YP_005727326.1 384543264 12316451 complement(1723235..1724500) 1 NC_017328.1 Membrane-associated protein uidC precursor 1724500 uidC 12316451 uidC Shigella flexneri 2002017 Membrane-associated protein uidC precursor YP_005727326.1 1723235 R 591020 CDS YP_005727327.1 384543265 12316453 complement(1725570..1727273) 1 NC_017328.1 Beta-D-glucuronidase 1727273 uidA 12316453 uidA Shigella flexneri 2002017 Beta-D-glucuronidase YP_005727327.1 1725570 R 591020 CDS YP_005727328.1 384543266 12316454 complement(1727661..1728251) 1 NC_017328.1 HTH-type transcriptional regulator uidR 1728251 uidR 12316454 uidR Shigella flexneri 2002017 HTH-type transcriptional regulator uidR YP_005727328.1 1727661 R 591020 CDS YP_005727329.1 384543267 12316456 1729273..1729524 1 NC_017328.1 hypothetical protein 1729524 12316456 SFxv_1844 Shigella flexneri 2002017 hypothetical protein YP_005727329.1 1729273 D 591020 CDS YP_005727330.1 384543268 12316457 complement(1730136..1731164) 1 NC_017328.1 Repressor of malXY 1731164 malI 12316457 malI Shigella flexneri 2002017 Repressor of malXY YP_005727330.1 1730136 R 591020 CDS YP_005727331.1 384543269 12316458 1731339..1732931 1 NC_017328.1 PTS system, maltose and glucose-specific IIABC component 1732931 malX 12316458 malX Shigella flexneri 2002017 PTS system, maltose and glucose-specific IIABC component YP_005727331.1 1731339 D 591020 CDS YP_005727332.1 384543270 12316459 1732941..1734113 1 NC_017328.1 Cystathionine beta-lyase 1734113 malY 12316459 malY Shigella flexneri 2002017 Cystathionine beta-lyase YP_005727332.1 1732941 D 591020 CDS YP_005727333.1 384543271 12316460 1734217..1735218 1 NC_017328.1 Adenosine deaminase 1735218 add 12316460 add Shigella flexneri 2002017 Adenosine deaminase YP_005727333.1 1734217 D 591020 CDS YP_005727334.1 384543272 12316461 complement(1735254..1736294) 1 NC_017328.1 Oxidoreductase, NAD-binding protein 1736294 ydgJ 12316461 ydgJ Shigella flexneri 2002017 Oxidoreductase, NAD-binding protein YP_005727334.1 1735254 R 591020 CDS YP_005727335.1 384543273 12316462 1736537..1736662 1 NC_017328.1 Beta-lactam resistance protein 1736662 blr 12316462 blr Shigella flexneri 2002017 Beta-lactam resistance protein YP_005727335.1 1736537 D 591020 CDS YP_005727336.1 384543274 12316463 1736935..1737150 1 NC_017328.1 OriC-binding nucleoid-associated protein 1737150 cnu 12316463 cnu Shigella flexneri 2002017 OriC-binding nucleoid-associated protein YP_005727336.1 1736935 D 591020 CDS YP_005727337.1 384543275 12316464 1737212..1737676 1 NC_017328.1 hypothetical protein 1737676 12316464 SFxv_1853 Shigella flexneri 2002017 hypothetical protein YP_005727337.1 1737212 D 591020 CDS YP_005727338.1 384543276 12316465 1737753..1738334 1 NC_017328.1 Electron transport complex protein rnfA 1738334 rsxA 12316465 rsxA Shigella flexneri 2002017 Electron transport complex protein rnfA YP_005727338.1 1737753 D 591020 CDS YP_005727339.1 384543277 12316466 1738334..1738912 1 NC_017328.1 Electron transport complex protein rnfB 1738912 rsxB 12316466 rsxB Shigella flexneri 2002017 Electron transport complex protein rnfB YP_005727339.1 1738334 D 591020 CDS YP_005727340.1 384543278 12316467 1738905..1741127 1 NC_017328.1 electron transport complex protein RnfC 1741127 rsxC 12316467 rsxC Shigella flexneri 2002017 electron transport complex protein RnfC YP_005727340.1 1738905 D 591020 CDS YP_005727341.1 384543279 12316468 1741128..1742186 1 NC_017328.1 Electron transport complex protein rnfD 1742186 rsxD 12316468 rsxD Shigella flexneri 2002017 Electron transport complex protein rnfD YP_005727341.1 1741128 D 591020 CDS YP_005727342.1 384543280 12316469 1742190..1742810 1 NC_017328.1 Electron transport complex protein rnfG 1742810 rsxG 12316469 rsxG Shigella flexneri 2002017 Electron transport complex protein rnfG YP_005727342.1 1742190 D 591020 CDS YP_005727343.1 384543281 12316470 1742814..1743425 1 NC_017328.1 putative NADH:ubiquinone oxidoreductase, subunit RnfE 1743425 rsxE 12316470 rsxE Shigella flexneri 2002017 putative NADH:ubiquinone oxidoreductase, subunit RnfE YP_005727343.1 1742814 D 591020 CDS YP_005727344.1 384543282 12316471 1743510..1744145 1 NC_017328.1 Endonuclease III 1744145 nth 12316471 nth Shigella flexneri 2002017 Endonuclease III YP_005727344.1 1743510 D 591020 CDS YP_005727345.1 384543283 12316472 1744756..1746258 1 NC_017328.1 Tripeptide permease tppB 1746258 tppB 12316472 tppB Shigella flexneri 2002017 Tripeptide permease tppB YP_005727345.1 1744756 D 591020 CDS YP_005727346.1 384543284 12316473 1746364..1746969 1 NC_017328.1 Glutathionine S-transferase 1746969 gst 12316473 gst Shigella flexneri 2002017 Glutathionine S-transferase YP_005727346.1 1746364 D 591020 CDS YP_005727347.1 384543285 12316474 complement(1747013..1747876) 1 NC_017328.1 Pyridoxamine kinase 1747876 pdxY 12316474 pdxY Shigella flexneri 2002017 Pyridoxamine kinase YP_005727347.1 1747013 R 591020 CDS YP_005727348.1 384543286 12316475 complement(1747935..1749209) 1 NC_017328.1 putative Tyrosyl-tRNA synthetase 1749209 tyrS 12316475 tyrS Shigella flexneri 2002017 putative Tyrosyl-tRNA synthetase YP_005727348.1 1747935 R 591020 CDS YP_005727349.1 384543287 12316476 complement(1749338..1749994) 1 NC_017328.1 Pyridoxamine 5'-phosphate oxidase 1749994 pdxH 12316476 pdxH Shigella flexneri 2002017 Pyridoxamine 5'-phosphate oxidase YP_005727349.1 1749338 R 591020 CDS YP_005727350.1 384543288 12316477 complement(1750053..1750301) 1 NC_017328.1 YdhA protein 1750301 ydhA 12316477 ydhA Shigella flexneri 2002017 YdhA protein YP_005727350.1 1750053 R 591020 CDS YP_005727351.1 384543289 12316478 complement(1750323..1751228) 1 NC_017328.1 IS2 ORF2 1751228 12316478 SFxv_1868 Shigella flexneri 2002017 IS2 ORF2 YP_005727351.1 1750323 R 591020 CDS YP_005727352.1 384543290 12316479 1750752..1751183 1 NC_017328.1 Insertion element IS2 protein 1751183 12316479 SFxv_1867 Shigella flexneri 2002017 Insertion element IS2 protein YP_005727352.1 1750752 D 591020 CDS YP_005727353.1 384543291 12316481 complement(1751817..1752926) 1 NC_017328.1 anhydro-N-acetylmuramic acid kinase 1752926 anmK 12316481 anmK Shigella flexneri 2002017 anhydro-N-acetylmuramic acid kinase YP_005727353.1 1751817 R 591020 CDS YP_005727354.1 384543292 12316482 1753200..1753667 1 NC_017328.1 Outer membrane lipoprotein slyB precursor 1753667 slyB 12316482 slyB Shigella flexneri 2002017 Outer membrane lipoprotein slyB precursor YP_005727354.1 1753200 D 591020 CDS YP_005727355.1 384543293 12316483 complement(1753714..1754154) 1 NC_017328.1 MarR family transcriptional regulator 1754154 slyA 12316483 slyA Shigella flexneri 2002017 MarR family transcriptional regulator YP_005727355.1 1753714 R 591020 CDS YP_005727356.1 384543294 12316484 1754349..1754585 1 NC_017328.1 hypothetical protein 1754585 12316484 SFxv_1873 Shigella flexneri 2002017 hypothetical protein YP_005727356.1 1754349 D 591020 CDS YP_005727357.1 384543295 12316485 1754546..1755445 1 NC_017328.1 hypothetical protein 1755445 ydhJ 12316485 ydhJ Shigella flexneri 2002017 hypothetical protein YP_005727357.1 1754546 D 591020 CDS YP_005727358.1 384543296 12316487 complement(1757458..1757994) 1 NC_017328.1 Superoxide dismutase(Cu-Zn) 1757994 sodC 12316487 sodC Shigella flexneri 2002017 Superoxide dismutase(Cu-Zn) YP_005727358.1 1757458 R 591020 CDS YP_005727359.1 384543297 12316488 complement(1758060..1758956) 1 NC_017328.1 Oxidoreductase ydhF 1758956 ydhF 12316488 ydhF Shigella flexneri 2002017 Oxidoreductase ydhF YP_005727359.1 1758060 R 591020 CDS YP_005727360.1 384543298 12316489 complement(1759005..1759382) 1 NC_017328.1 hypothetical protein 1759382 12316489 SFxv_1881 Shigella flexneri 2002017 hypothetical protein YP_005727360.1 1759005 R 591020 CDS YP_005727361.1 384543299 12316490 1759347..1759946 1 NC_017328.1 putative HTH-type transcriptional regulator ydhM 1759946 ydhM 12316490 ydhM Shigella flexneri 2002017 putative HTH-type transcriptional regulator ydhM YP_005727361.1 1759347 D 591020 CDS YP_005727362.1 384543300 12316491 1759983..1761080 1 NC_017328.1 N-ethylmaleimide reductase 1761080 nemA 12316491 nemA Shigella flexneri 2002017 N-ethylmaleimide reductase YP_005727362.1 1759983 D 591020 CDS YP_005727363.1 384543301 12316492 1761161..1761568 1 NC_017328.1 Lactoylglutathione lyase 1761568 gloA 12316492 gloA Shigella flexneri 2002017 Lactoylglutathione lyase YP_005727363.1 1761161 D 591020 CDS YP_005727364.1 384543302 12316493 1761671..1762318 1 NC_017328.1 Ribonuclease T 1762318 rnt 12316493 rnt Shigella flexneri 2002017 Ribonuclease T YP_005727364.1 1761671 D 591020 CDS YP_005727365.1 384543303 12316495 complement(1766913..1768121) 1 NC_017328.1 putative virulence protein 1768121 12316495 SFxv_1887 Shigella flexneri 2002017 putative virulence protein YP_005727365.1 1766913 R 591020 CDS YP_005727366.1 384543304 12316496 1768192..1768629 1 NC_017328.1 Transposase, IS605 family 1768629 12316496 SFxv_1888 Shigella flexneri 2002017 Transposase, IS605 family YP_005727366.1 1768192 D 591020 CDS YP_005727368.1 384543305 12316497 complement(1768668..1769015) 1 NC_017328.1 Glutaredoxin-4 1769015 grxD 12316497 grxD Shigella flexneri 2002017 Glutaredoxin-4 YP_005727368.1 1768668 R 591020 CDS YP_005727369.1 384543306 12316498 1769350..1770177 1 NC_017328.1 putative lipoprotein 1770177 ydhO 12316498 ydhO Shigella flexneri 2002017 putative lipoprotein YP_005727369.1 1769350 D 591020 CDS YP_005727370.1 384543307 12316499 1770305..1770886 1 NC_017328.1 Superoxide dismutase(Fe) 1770886 sodB 12316499 sodB Shigella flexneri 2002017 Superoxide dismutase(Fe) YP_005727370.1 1770305 D 591020 CDS YP_005727371.1 384543308 12316500 complement(1771032..1772201) 1 NC_017328.1 putative inner membrane transport protein 1772201 12316500 SFxv_1893 Shigella flexneri 2002017 putative inner membrane transport protein YP_005727371.1 1771032 R 591020 CDS YP_005727372.1 384543309 12316501 1772755..1773780 1 NC_017328.1 HTH-type transcriptional repressor purR 1773780 purR 12316501 purR Shigella flexneri 2002017 HTH-type transcriptional repressor purR YP_005727372.1 1772755 D 591020 CDS YP_005727373.1 384543310 12316502 complement(1773777..1774709) 1 NC_017328.1 putative LYSR-type transcriptional regulator 1774709 12316502 SFxv_1895 Shigella flexneri 2002017 putative LYSR-type transcriptional regulator YP_005727373.1 1773777 R 591020 CDS YP_005727374.1 384543311 12316503 1774822..1776033 1 NC_017328.1 putative transport protein 1776033 12316503 SFxv_1896 Shigella flexneri 2002017 putative transport protein YP_005727374.1 1774822 D 591020 CDS YP_005727375.1 384543312 12316504 1776324..1777472 1 NC_017328.1 Cyclopropane fatty acyl phospholipid synthase 1777472 cfa 12316504 cfa Shigella flexneri 2002017 Cyclopropane fatty acyl phospholipid synthase YP_005727375.1 1776324 D 591020 CDS YP_005727376.1 384543313 12316505 complement(1777512..1778153) 1 NC_017328.1 riboflavin synthase subunit alpha 1778153 ribC 12316505 ribC Shigella flexneri 2002017 riboflavin synthase subunit alpha YP_005727376.1 1777512 R 591020 CDS YP_005727377.1 384543314 12316506 1778368..1779741 1 NC_017328.1 Multidrug resistance protein mdtK 1779741 mdtK 12316506 mdtK Shigella flexneri 2002017 Multidrug resistance protein mdtK YP_005727377.1 1778368 D 591020 CDS YP_005727378.1 384543315 12316507 complement(1779782..1781038) 1 NC_017328.1 Possible enzyme 1781038 12316507 SFxv_1900 Shigella flexneri 2002017 Possible enzyme YP_005727378.1 1779782 R 591020 CDS YP_005727379.1 384543316 12316510 1781611..1781916 1 NC_017328.1 hypothetical protein 1781916 12316510 SFxv_1901 Shigella flexneri 2002017 hypothetical protein YP_005727379.1 1781611 D 591020 CDS YP_005727380.1 384543317 12316511 1782042..1783262 1 NC_017328.1 hypothetical protein 1783262 12316511 SFxv_1902 Shigella flexneri 2002017 hypothetical protein YP_005727380.1 1782042 D 591020 CDS YP_005727381.1 384543318 12316512 complement(1783476..1784288) 1 NC_017328.1 hypothetical protein 1784288 12316512 SFxv_1903 Shigella flexneri 2002017 hypothetical protein YP_005727381.1 1783476 R 591020 CDS YP_005727382.1 384543319 12316513 complement(1784292..1785077) 1 NC_017328.1 Protein phsC 1785077 12316513 SFxv_1904 Shigella flexneri 2002017 Protein phsC YP_005727382.1 1784292 R 591020 CDS YP_005727383.1 384543320 12316514 complement(1785074..1785628) 1 NC_017328.1 putative oxidoreductase, Fe-S subunit 1785628 12316514 SFxv_1905 Shigella flexneri 2002017 putative oxidoreductase, Fe-S subunit YP_005727383.1 1785074 R 591020 CDS YP_005727384.1 384543321 12316515 complement(1785806..1786453) 1 NC_017328.1 hypothetical protein 1786453 12316515 SFxv_1906 Shigella flexneri 2002017 hypothetical protein YP_005727384.1 1785806 R 591020 CDS YP_005727385.1 384543322 12316516 complement(1786457..1787650) 1 NC_017328.1 hypothetical protein 1787650 12316516 SFxv_1907 Shigella flexneri 2002017 hypothetical protein YP_005727385.1 1786457 R 591020 CDS YP_005727386.1 384543323 12316517 complement(1788557..1789183) 1 NC_017328.1 putative ferredoxin-like protein YdhY 1789183 12316517 SFxv_1908 Shigella flexneri 2002017 putative ferredoxin-like protein YdhY YP_005727386.1 1788557 R 591020 CDS YP_005727387.1 384543324 12316518 1789211..1789348 1 NC_017328.1 hypothetical protein 1789348 12316518 SFxv_1909 Shigella flexneri 2002017 hypothetical protein YP_005727387.1 1789211 D 591020 CDS YP_005727388.1 384543325 12318463 complement(1789713..1790054) 1 NC_017328.1 IS150 ORF1 1790054 12318463 SFxv_1910 Shigella flexneri 2002017 IS150 ORF1 YP_005727388.1 1789713 R 591020 CDS YP_005727389.1 384543326 12318464 1790129..1790632 1 NC_017328.1 IS1 orfB 1790632 12318464 SFxv_1911 Shigella flexneri 2002017 IS1 orfB YP_005727389.1 1790129 D 591020 CDS YP_005727390.1 384543327 12318465 1790964..1792592 1 NC_017328.1 Pyruvate kinase I 1792592 pykF 12318465 pykF Shigella flexneri 2002017 Pyruvate kinase I YP_005727390.1 1790964 D 591020 CDS YP_005727391.1 384543328 12318466 1792903..1793139 1 NC_017328.1 Major outer membrane lipoprotein precursor 1793139 lpp 12318466 lpp Shigella flexneri 2002017 Major outer membrane lipoprotein precursor YP_005727391.1 1792903 D 591020 CDS YP_005727392.1 384543329 12318467 complement(1793202..1794206) 1 NC_017328.1 LysM domain/ErfK/YbiS/YcfS/YnhG family protein 1794206 ynhG 12318467 ynhG Shigella flexneri 2002017 LysM domain/ErfK/YbiS/YcfS/YnhG family protein YP_005727392.1 1793202 R 591020 CDS YP_005727393.1 384543330 12318468 complement(1794355..1794771) 1 NC_017328.1 Cysteine desulfuration protein sufE 1794771 sufE 12318468 sufE Shigella flexneri 2002017 Cysteine desulfuration protein sufE YP_005727393.1 1794355 R 591020 CDS YP_005727394.1 384543331 12318469 complement(1794784..1796004) 1 NC_017328.1 cysteine desulfurase 1796004 sufS 12318469 sufS Shigella flexneri 2002017 cysteine desulfurase YP_005727394.1 1794784 R 591020 CDS YP_005727395.1 384543332 12318470 complement(1796001..1797272) 1 NC_017328.1 putative Selenocysteine lyase 1797272 sufD 12318470 sufD Shigella flexneri 2002017 putative Selenocysteine lyase YP_005727395.1 1796001 R 591020 CDS YP_005727396.1 384543333 12318471 complement(1797247..1797993) 1 NC_017328.1 ATPase 1797993 sufC 12318471 sufC Shigella flexneri 2002017 ATPase YP_005727396.1 1797247 R 591020 CDS YP_005727397.1 384543334 12318472 complement(1798003..1799490) 1 NC_017328.1 FeS assembly protein SufB 1799490 sufB 12318472 sufB Shigella flexneri 2002017 FeS assembly protein SufB YP_005727397.1 1798003 R 591020 CDS YP_005727398.1 384543335 12318473 complement(1799499..1799867) 1 NC_017328.1 SufA scaffold protein for iron-sulfur cluster assembly 1799867 sufA 12318473 sufA Shigella flexneri 2002017 SufA scaffold protein for iron-sulfur cluster assembly YP_005727398.1 1799499 R 591020 CDS YP_005727399.1 384543336 12318474 complement(1800415..1800684) 1 NC_017328.1 hypothetical protein 1800684 12318474 SFxv_1922 Shigella flexneri 2002017 hypothetical protein YP_005727399.1 1800415 R 591020 CDS YP_005727400.1 384543337 12318475 complement(1800703..1801113) 1 NC_017328.1 Esterase ydiI 1801113 ydiI 12318475 ydiI Shigella flexneri 2002017 Esterase ydiI YP_005727400.1 1800703 R 591020 CDS YP_005727401.1 384543338 12318476 complement(1801110..1804166) 1 NC_017328.1 putative oxidase 1804166 ydiJ 12318476 ydiJ Shigella flexneri 2002017 putative oxidase YP_005727401.1 1801110 R 591020 CDS YP_005727402.1 384543339 12318477 1804555..1805667 1 NC_017328.1 inner membrane protein ydiK 1805667 ydiK 12318477 ydiK Shigella flexneri 2002017 inner membrane protein ydiK YP_005727402.1 1804555 D 591020 CDS YP_005727403.1 384543340 12318478 1806069..1806452 1 NC_017328.1 hypothetical protein 1806452 12318478 SFxv_1926 Shigella flexneri 2002017 hypothetical protein YP_005727403.1 1806069 D 591020 CDS YP_005727404.1 384543341 12318479 1806552..1807757 1 NC_017328.1 Major facilitator superfamily MFS_1 1807757 ydiM 12318479 ydiM Shigella flexneri 2002017 Major facilitator superfamily MFS_1 YP_005727404.1 1806552 D 591020 CDS YP_005727405.1 384543342 12318480 1808051..1809211 1 NC_017328.1 putative amino acid/amine transport protein 1809211 ydiN 12318480 ydiN Shigella flexneri 2002017 putative amino acid/amine transport protein YP_005727405.1 1808051 D 591020 CDS YP_005727406.1 384543343 12318481 1809223..1810089 1 NC_017328.1 Quinate/shikimate dehydrogenase 1810089 ydiB 12318481 ydiB Shigella flexneri 2002017 Quinate/shikimate dehydrogenase YP_005727406.1 1809223 D 591020 CDS YP_005727407.1 384543344 12318482 1810120..1810878 1 NC_017328.1 3-dehydroquinate dehydratase 1810878 aroD 12318482 aroD Shigella flexneri 2002017 3-dehydroquinate dehydratase YP_005727407.1 1810120 D 591020 CDS YP_005727408.1 384543345 12318483 complement(1810960..1811463) 1 NC_017328.1 IS1 orfB 1811463 12318483 SFxv_1931 Shigella flexneri 2002017 IS1 orfB YP_005727408.1 1810960 R 591020 CDS YP_005727409.1 384543346 12318484 1811577..1811765 1 NC_017328.1 IS150 ORF1 1811765 12318484 SFxv_1932 Shigella flexneri 2002017 IS150 ORF1 YP_005727409.1 1811577 D 591020 CDS YP_005727410.1 384543347 12318485 1811699..1813258 1 NC_017328.1 putative sulfatase 1813258 ydeN-2 12318485 ydeN-2 Shigella flexneri 2002017 putative sulfatase YP_005727410.1 1811699 D 591020 CDS YP_005727411.1 384543348 12318486 1813295..1814467 1 NC_017328.1 hypothetical protein 1814467 12318486 SFxv_1934 Shigella flexneri 2002017 hypothetical protein YP_005727411.1 1813295 D 591020 CDS YP_005727412.1 384543349 12318488 1816481..1818841 1 NC_017328.1 TonB-dependent receptor 1818841 yddB 12318488 yddB Shigella flexneri 2002017 TonB-dependent receptor YP_005727412.1 1816481 D 591020 CDS YP_005727413.1 384543350 12318489 complement(1819111..1819614) 1 NC_017328.1 IS1 orfB 1819614 12318489 SFxv_1937 Shigella flexneri 2002017 IS1 orfB YP_005727413.1 1819111 R 591020 CDS YP_005727414.1 384543351 12318490 1819866..1822385 1 NC_017328.1 putative IS1 encoded protein 1822385 12318490 SFxv_1938 Shigella flexneri 2002017 putative IS1 encoded protein YP_005727414.1 1819866 D 591020 CDS YP_005727415.1 384543352 12318491 complement(1822290..1822538) 1 NC_017328.1 putative integrase 1822538 12318491 SFxv_1939 Shigella flexneri 2002017 putative integrase YP_005727415.1 1822290 R 591020 CDS YP_005727416.1 384543353 12318492 1822613..1823116 1 NC_017328.1 IS1 orfB 1823116 12318492 SFxv_1940 Shigella flexneri 2002017 IS1 orfB YP_005727416.1 1822613 D 591020 CDS YP_005727417.1 384543354 12318493 1823594..1824994 1 NC_017328.1 Glutamate decarboxylase beta 1824994 gadB 12318493 gadB Shigella flexneri 2002017 Glutamate decarboxylase beta YP_005727417.1 1823594 D 591020 CDS YP_005727418.1 384543355 12318494 1825150..1826685 1 NC_017328.1 putative glutamate/gamma-aminobutyrate antiporter 1826685 gadC 12318494 gadC Shigella flexneri 2002017 putative glutamate/gamma-aminobutyrate antiporter YP_005727418.1 1825150 D 591020 CDS YP_005727419.1 384543356 12318495 1826816..1828135 1 NC_017328.1 putative lipoprotein 1828135 yddW 12318495 yddW Shigella flexneri 2002017 putative lipoprotein YP_005727419.1 1826816 D 591020 CDS YP_005727420.1 384543357 12318496 1828512..1829657 1 NC_017328.1 Diguanylate cyclase yddV 1829657 yddV 12318496 yddV Shigella flexneri 2002017 Diguanylate cyclase yddV YP_005727420.1 1828512 D 591020 CDS YP_005727421.1 384543358 12318497 1829582..1830199 1 NC_017328.1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor 1830199 12318497 SFxv_1946 Shigella flexneri 2002017 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor YP_005727421.1 1829582 D 591020 CDS YP_005727422.1 384543359 12318498 1830457..1830858 1 NC_017328.1 Peptidase M15D, vanX D-ala-D-ala dipeptidase 1830858 12318498 SFxv_1947 Shigella flexneri 2002017 Peptidase M15D, vanX D-ala-D-ala dipeptidase YP_005727422.1 1830457 D 591020 CDS YP_005727423.1 384543360 12318499 1830803..1831699 1 NC_017328.1 Inner membrane ABC transporter permease protein YddQ 1831699 ddpC 12318499 ddpC Shigella flexneri 2002017 Inner membrane ABC transporter permease protein YddQ YP_005727423.1 1830803 D 591020 CDS YP_005727424.1 384543361 12318500 1831696..1832670 1 NC_017328.1 ATPase 1832670 ddpD 12318500 ddpD Shigella flexneri 2002017 ATPase YP_005727424.1 1831696 D 591020 CDS YP_005727425.1 384543362 12318502 complement(1833645..1834076) 1 NC_017328.1 Osmotically inducible protein OsmC 1834076 osmC 12318502 osmC Shigella flexneri 2002017 Osmotically inducible protein OsmC YP_005727425.1 1833645 R 591020 CDS YP_005727426.1 384543363 12318503 complement(1834249..1834947) 1 NC_017328.1 IS1 ORF2 1834947 12318503 SFxv_1953 Shigella flexneri 2002017 IS1 ORF2 YP_005727426.1 1834249 R 591020 CDS YP_005727427.1 384543364 12318504 1834867..1835094 1 NC_017328.1 putative peptidase 1835094 12318504 SFxv_1952 Shigella flexneri 2002017 putative peptidase YP_005727427.1 1834867 D 591020 CDS YP_005727428.1 384543365 12318506 1836965..1837975 1 NC_017328.1 putative Zn-dependent alcohol dehydrogenase 1837975 adhP 12318506 adhP Shigella flexneri 2002017 putative Zn-dependent alcohol dehydrogenase YP_005727428.1 1836965 D 591020 CDS YP_005727429.1 384543366 12318507 1838043..1838405 1 NC_017328.1 Plasmid maintenance system antidote protein, XRE family 1838405 yddM 12318507 yddM Shigella flexneri 2002017 Plasmid maintenance system antidote protein, XRE family YP_005727429.1 1838043 D 591020 CDS YP_005727430.1 384543367 12318508 complement(1838633..1839286) 1 NC_017328.1 Formate dehydrogenase-N gamma subunit 1839286 fdnI 12318508 fdnI Shigella flexneri 2002017 Formate dehydrogenase-N gamma subunit YP_005727430.1 1838633 R 591020 CDS YP_005727431.1 384543368 12318509 complement(1839279..1840163) 1 NC_017328.1 Formate dehydrogenase, nitrate-inducible, iron-sulfur subunit 1840163 fdnH 12318509 fdnH Shigella flexneri 2002017 Formate dehydrogenase, nitrate-inducible, iron-sulfur subunit YP_005727431.1 1839279 R 591020 CDS YP_005727432.1 384543369 12318511 1843455..1844336 1 NC_017328.1 hypothetical protein 1844336 12318511 SFxv_1960 Shigella flexneri 2002017 hypothetical protein YP_005727432.1 1843455 D 591020 CDS YP_005727433.1 384543370 12318512 1844591..1845691 1 NC_017328.1 putative outer membrane porin protein 1845691 12318512 SFxv_1961 Shigella flexneri 2002017 putative outer membrane porin protein YP_005727433.1 1844591 D 591020 CDS YP_005727434.1 384543371 12318513 1846450..1847439 1 NC_017328.1 hypothetical protein 1847439 12318513 SFxv_1962 Shigella flexneri 2002017 hypothetical protein YP_005727434.1 1846450 D 591020 CDS YP_005727435.1 384543372 12318514 1847446..1847676 1 NC_017328.1 leucine-rich repeat protein 1847676 yddJ 12318514 yddJ Shigella flexneri 2002017 leucine-rich repeat protein YP_005727435.1 1847446 D 591020 CDS YP_005727436.1 384543373 12318515 complement(1847613..1847846) 1 NC_017328.1 putative IS1 encoded protein 1847846 12318515 SFxv_1963 Shigella flexneri 2002017 putative IS1 encoded protein YP_005727436.1 1847613 R 591020 CDS YP_005727437.1 384543374 12318516 1847921..1848424 1 NC_017328.1 IS1 transposase 1848424 12318516 SFxv_1964 Shigella flexneri 2002017 IS1 transposase YP_005727437.1 1847921 D 591020 CDS YP_005727438.1 384543375 12318517 complement(1848359..1848667) 1 NC_017328.1 hypothetical protein 1848667 12318517 SFxv_1965 Shigella flexneri 2002017 hypothetical protein YP_005727438.1 1848359 R 591020 CDS YP_005727439.1 384543376 12318518 1848882..1850270 1 NC_017328.1 Nitrite extrusion protein 2 1850270 narU 12318518 narU Shigella flexneri 2002017 Nitrite extrusion protein 2 YP_005727439.1 1848882 D 591020 CDS YP_005727440.1 384543377 12318520 1854089..1855021 1 NC_017328.1 Nitrate reductase 1, beta subunit 1855021 narY 12318520 narY Shigella flexneri 2002017 Nitrate reductase 1, beta subunit YP_005727440.1 1854089 D 591020 CDS YP_005727441.1 384543378 12318521 1854999..1855421 1 NC_017328.1 IS91 orf 1855421 12318521 SFxv_1969 Shigella flexneri 2002017 IS91 orf YP_005727441.1 1854999 D 591020 CDS YP_005727442.1 384543379 12318522 complement(1855065..1855391) 1 NC_017328.1 IS91 orf 1855391 12318522 SFxv_1971 Shigella flexneri 2002017 IS91 orf YP_005727442.1 1855065 R 591020 CDS YP_005727443.1 384543380 12318523 1855376..1856608 1 NC_017328.1 IS91 ORF 1856608 12318523 SFxv_1970 Shigella flexneri 2002017 IS91 ORF YP_005727443.1 1855376 D 591020 CDS YP_005727444.1 384543381 12318524 complement(1856879..1857601) 1 NC_017328.1 putative HTH-type transcriptional regulator yncC 1857601 yncC 12318524 yncC Shigella flexneri 2002017 putative HTH-type transcriptional regulator yncC YP_005727444.1 1856879 R 591020 CDS YP_005727445.1 384543382 12318525 complement(1857742..1858872) 1 NC_017328.1 putative oxidoreductase 1858872 yncB 12318525 yncB Shigella flexneri 2002017 putative oxidoreductase YP_005727445.1 1857742 R 591020 CDS YP_005727446.1 384543383 12318526 complement(1858909..1859814) 1 NC_017328.1 IS2 ORF2 1859814 12318526 SFxv_1975 Shigella flexneri 2002017 IS2 ORF2 YP_005727446.1 1858909 R 591020 CDS YP_005727447.1 384543384 12318527 1859338..1859769 1 NC_017328.1 putative IS2 ORF 1859769 12318527 SFxv_1974 Shigella flexneri 2002017 putative IS2 ORF YP_005727447.1 1859338 D 591020 CDS YP_005727448.1 384543385 12318529 1860812..1861261 1 NC_017328.1 Inner membrane protein ydcZ 1861261 ydcZ 12318529 ydcZ Shigella flexneri 2002017 Inner membrane protein ydcZ YP_005727448.1 1860812 D 591020 CDS YP_005727449.1 384543386 12318530 complement(1861262..1861495) 1 NC_017328.1 hypothetical protein 1861495 12318530 SFxv_1978 Shigella flexneri 2002017 hypothetical protein YP_005727449.1 1861262 R 591020 CDS YP_005727450.1 384543387 12318531 complement(1861581..1861829) 1 NC_017328.1 hypothetical protein 1861829 12318531 SFxv_1979 Shigella flexneri 2002017 hypothetical protein YP_005727450.1 1861581 R 591020 CDS YP_005727451.1 384543388 12318532 complement(1862446..1863255) 1 NC_017328.1 putative acetyltransferase 1863255 12318532 SFxv_1980 Shigella flexneri 2002017 putative acetyltransferase YP_005727451.1 1862446 R 591020 CDS YP_005727452.1 384543389 12318533 complement(1863465..1864889) 1 NC_017328.1 gamma-aminobutyraldehyde dehydrogenase 1864889 ydcW 12318533 ydcW Shigella flexneri 2002017 gamma-aminobutyraldehyde dehydrogenase YP_005727452.1 1863465 R 591020 CDS YP_005727453.1 384543390 12318534 complement(1864911..1865705) 1 NC_017328.1 putative transport system permease 1865705 ydcV 12318534 ydcV Shigella flexneri 2002017 putative transport system permease YP_005727453.1 1864911 R 591020 CDS YP_005727454.1 384543391 12318535 complement(1865695..1866075) 1 NC_017328.1 Inner membrane ABC transporter permease protein ydcU 1866075 ydcU 12318535 ydcU Shigella flexneri 2002017 Inner membrane ABC transporter permease protein ydcU YP_005727454.1 1865695 R 591020 CDS YP_005727455.1 384543392 12318536 1866205..1866315 1 NC_017328.1 IS1294 ORF 1866315 12318536 SFxv_1984 Shigella flexneri 2002017 IS1294 ORF YP_005727455.1 1866205 D 591020 CDS YP_005727456.1 384543393 12318537 1866385..1867731 1 NC_017328.1 IS91 ORF 1867731 12318537 SFxv_1985 Shigella flexneri 2002017 IS91 ORF YP_005727456.1 1866385 D 591020 CDS YP_005727457.1 384543394 12318538 complement(1867820..1868410) 1 NC_017328.1 putative virulence protein 1868410 ydcM-1 12318538 ydcM-1 Shigella flexneri 2002017 putative virulence protein YP_005727457.1 1867820 R 591020 CDS YP_005727458.1 384543395 12318539 complement(1868492..1868752) 1 NC_017328.1 putative virulence protein 1868752 ydcM-2 12318539 ydcM-2 Shigella flexneri 2002017 putative virulence protein YP_005727458.1 1868492 R 591020 CDS YP_005727459.1 384543396 12318541 1869329..1869577 1 NC_017328.1 hypothetical protein 1869577 12318541 SFxv_1990 Shigella flexneri 2002017 hypothetical protein YP_005727459.1 1869329 D 591020 CDS YP_005727460.1 384543397 12318542 complement(1869344..1870000) 1 NC_017328.1 putative lipoprotein 1870000 ydcL 12318542 ydcL Shigella flexneri 2002017 putative lipoprotein YP_005727460.1 1869344 R 591020 CDS YP_005727461.1 384543398 12318543 complement(1870032..1870151) 1 NC_017328.1 hypothetical protein 1870151 12318543 SFxv_1992 Shigella flexneri 2002017 hypothetical protein YP_005727461.1 1870032 R 591020 CDS YP_005727462.1 384543399 12318544 complement(1870303..1870896) 1 NC_017328.1 Tellurite resistance protein TehB 1870896 tehB 12318544 tehB Shigella flexneri 2002017 Tellurite resistance protein TehB YP_005727462.1 1870303 R 591020 CDS YP_005727463.1 384543400 12318545 complement(1870893..1871885) 1 NC_017328.1 Tellurite resistance protein tehA 1871885 tehA 12318545 tehA Shigella flexneri 2002017 Tellurite resistance protein tehA YP_005727463.1 1870893 R 591020 CDS YP_005727464.1 384543401 12318546 1872009..1872989 1 NC_017328.1 putative UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 1872989 ydcK 12318546 ydcK Shigella flexneri 2002017 putative UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_005727464.1 1872009 D 591020 CDS YP_005727465.1 384543402 12318547 complement(1872984..1873520) 1 NC_017328.1 Ribosomal-protein-serine acetyltransferase 1873520 rimL 12318547 rimL Shigella flexneri 2002017 Ribosomal-protein-serine acetyltransferase YP_005727465.1 1872984 R 591020 CDS YP_005727466.1 384543403 12318548 complement(1873583..1873807) 1 NC_017328.1 hypothetical protein 1873807 12318548 SFxv_1997 Shigella flexneri 2002017 hypothetical protein YP_005727466.1 1873583 R 591020 CDS YP_005727467.1 384543404 12318549 1873823..1874026 1 NC_017328.1 hypothetical protein 1874026 12318549 SFxv_1998 Shigella flexneri 2002017 hypothetical protein YP_005727467.1 1873823 D 591020 CDS YP_005727468.1 384543405 12318550 complement(1873947..1875602) 1 NC_017328.1 Glucans biosynthesis protein D precursor 1875602 mdoD 12318550 mdoD Shigella flexneri 2002017 Glucans biosynthesis protein D precursor YP_005727468.1 1873947 R 591020 CDS YP_005727469.1 384543406 12318551 complement(1875827..1877170) 1 NC_017328.1 hypothetical protein 1877170 12318551 SFxv_2000 Shigella flexneri 2002017 hypothetical protein YP_005727469.1 1875827 R 591020 CDS YP_005727470.1 384543407 12318552 1877246..1878310 1 NC_017328.1 putative LYSR-type transcriptional regulator 1878310 ydcI 12318552 ydcI Shigella flexneri 2002017 putative LYSR-type transcriptional regulator YP_005727470.1 1877246 D 591020 CDS YP_005727471.1 384543408 12318553 complement(1878348..1879988) 1 NC_017328.1 Methyl-accepting chemotaxis protein III, ribose sensor receptor 1879988 trg 12318553 trg Shigella flexneri 2002017 Methyl-accepting chemotaxis protein III, ribose sensor receptor YP_005727471.1 1878348 R 591020 CDS YP_005727472.1 384543409 12318554 1880364..1880885 1 NC_017328.1 IS150 ORF1 1880885 12318554 SFxv_2003 Shigella flexneri 2002017 IS150 ORF1 YP_005727472.1 1880364 D 591020 CDS YP_005727473.1 384543410 12318555 1880882..1881685 1 NC_017328.1 IS103 orf 1881685 12318555 SFxv_2004 Shigella flexneri 2002017 IS103 orf YP_005727473.1 1880882 D 591020 CDS YP_005727474.1 384543411 12318556 complement(1881610..1882515) 1 NC_017328.1 IS2 ORF2 1882515 12318556 SFxv_2007 Shigella flexneri 2002017 IS2 ORF2 YP_005727474.1 1881610 R 591020 CDS YP_005727475.1 384543412 12318557 1882039..1882470 1 NC_017328.1 Insertion element IS2 protein 1882470 12318557 SFxv_2005 Shigella flexneri 2002017 Insertion element IS2 protein YP_005727475.1 1882039 D 591020 CDS YP_005727476.1 384543413 12318558 complement(1882473..1882838) 1 NC_017328.1 IS2 ORF1 1882838 12318558 SFxv_2008 Shigella flexneri 2002017 IS2 ORF1 YP_005727476.1 1882473 R 591020 CDS YP_005727477.1 384543414 12318559 complement(1882905..1883723) 1 NC_017328.1 IS600 ORF2 1883723 12318559 SFxv_2009 Shigella flexneri 2002017 IS600 ORF2 YP_005727477.1 1882905 R 591020 CDS YP_005727478.1 384543415 12318560 1884396..1884545 1 NC_017328.1 Regulatory protein mokB 1884545 mokB 12318560 mokB Shigella flexneri 2002017 Regulatory protein mokB YP_005727478.1 1884396 D 591020 CDS YP_005727479.1 384543416 12318561 complement(1884657..1884830) 1 NC_017328.1 hypothetical protein 1884830 ydcA 12318561 ydcA Shigella flexneri 2002017 hypothetical protein YP_005727479.1 1884657 R 591020 CDS YP_005727480.1 384543417 12318562 complement(1885075..1885641) 1 NC_017328.1 Nickel-dependent hydrogenase, b-type cytochrome subunit 1885641 cybB 12318562 cybB Shigella flexneri 2002017 Nickel-dependent hydrogenase, b-type cytochrome subunit YP_005727480.1 1885075 R 591020 CDS YP_005727481.1 384543418 12318564 complement(1886836..1888275) 1 NC_017328.1 Aldehyde dehydrogenase 1888275 aldA 12318564 aldA Shigella flexneri 2002017 Aldehyde dehydrogenase YP_005727481.1 1886836 R 591020 CDS YP_005727482.1 384543419 12318565 complement(1888472..1888966) 1 NC_017328.1 hypothetical protein 1888966 12318565 SFxv_2015 Shigella flexneri 2002017 hypothetical protein YP_005727482.1 1888472 R 591020 CDS YP_005727483.1 384543420 12318566 1889405..1890223 1 NC_017328.1 IS600 ORF2 1890223 12318566 SFxv_2016 Shigella flexneri 2002017 IS600 ORF2 YP_005727483.1 1889405 D 591020 CDS YP_005727484.1 384543421 12318567 complement(1890424..1894326) 1 NC_017328.1 ATP-dependent helicase HrpA 1894326 hrpA 12318567 hrpA Shigella flexneri 2002017 ATP-dependent helicase HrpA YP_005727484.1 1890424 R 591020 CDS YP_005727485.1 384543422 12318568 1894527..1895132 1 NC_017328.1 FMN-dependent NADH-azoreductase 1895132 azoR 12318568 azoR Shigella flexneri 2002017 FMN-dependent NADH-azoreductase YP_005727485.1 1894527 D 591020 CDS YP_005727486.1 384543423 12318570 1896233..1897051 1 NC_017328.1 IS600 orfB 1897051 12318570 SFxv_2021 Shigella flexneri 2002017 IS600 orfB YP_005727486.1 1896233 D 591020 CDS YP_005727487.1 384543424 12318571 complement(1897753..1897878) 1 NC_017328.1 putative SAM-dependent methyltransferase 1897878 12318571 SFxv_2023 Shigella flexneri 2002017 putative SAM-dependent methyltransferase YP_005727487.1 1897753 R 591020 CDS YP_005727488.1 384543425 12318572 complement(1897924..1898742) 1 NC_017328.1 ISSd1, transposase orfA/B, fusion 1898742 12318572 SFxv_2024 Shigella flexneri 2002017 ISSd1, transposase orfA/B, fusion YP_005727488.1 1897924 R 591020 CDS YP_005727489.1 384543426 12318573 complement(1899137..1900777) 1 NC_017328.1 putative SAM-dependent methyltransferase 1900777 12318573 SFxv_2025 Shigella flexneri 2002017 putative SAM-dependent methyltransferase YP_005727489.1 1899137 R 591020 CDS YP_005727490.1 384543427 12318574 complement(1900793..1901536) 1 NC_017328.1 putative phosphatidate cytidiltransferase 1901536 ynbB 12318574 ynbB Shigella flexneri 2002017 putative phosphatidate cytidiltransferase YP_005727490.1 1900793 R 591020 CDS YP_005727491.1 384543428 12318575 complement(1901688..1902293) 1 NC_017328.1 putative Phosphatidylglycerophosphate synthase 1902293 ynbA 12318575 ynbA Shigella flexneri 2002017 putative Phosphatidylglycerophosphate synthase YP_005727491.1 1901688 R 591020 CDS YP_005727492.1 384543429 12318576 complement(1902464..1904812) 1 NC_017328.1 hypothetical protein 1904812 12318576 SFxv_2028 Shigella flexneri 2002017 hypothetical protein YP_005727492.1 1902464 R 591020 CDS YP_005727493.1 384543430 12318577 1904887..1905390 1 NC_017328.1 IS1 orfB 1905390 12318577 SFxv_2029 Shigella flexneri 2002017 IS1 orfB YP_005727493.1 1904887 D 591020 CDS YP_005727494.1 384543431 12318578 complement(1905384..1905728) 1 NC_017328.1 Heat shock protein hslJ 1905728 hslJ 12318578 hslJ Shigella flexneri 2002017 Heat shock protein hslJ YP_005727494.1 1905384 R 591020 CDS YP_005727495.1 384543432 12318579 complement(1905827..1906816) 1 NC_017328.1 Fermentative D-lactate dehydrogenase 1906816 ldhA 12318579 ldhA Shigella flexneri 2002017 Fermentative D-lactate dehydrogenase YP_005727495.1 1905827 R 591020 CDS YP_005727496.1 384543433 12318580 1907024..1909663 1 NC_017328.1 hypothetical protein 1909663 12318580 SFxv_2032 Shigella flexneri 2002017 hypothetical protein YP_005727496.1 1907024 D 591020 CDS YP_005727497.1 384543434 12318581 1909660..1909845 1 NC_017328.1 putative lipoprotein 1909845 ynbE 12318581 ynbE Shigella flexneri 2002017 putative lipoprotein YP_005727497.1 1909660 D 591020 CDS YP_005727498.1 384543435 12318582 1909853..1910179 1 NC_017328.1 hypothetical protein 1910179 12318582 SFxv_2034 Shigella flexneri 2002017 hypothetical protein YP_005727498.1 1909853 D 591020 CDS YP_005727499.1 384543436 12318583 complement(1910351..1910560) 1 NC_017328.1 putative AraC-type DNA-binding domain-containing protein 1910560 feaR 12318583 feaR Shigella flexneri 2002017 putative AraC-type DNA-binding domain-containing protein YP_005727499.1 1910351 R 591020 CDS YP_005727500.1 384543437 12318584 1910825..1911328 1 NC_017328.1 IS1 orfB 1911328 12318584 SFxv_2036 Shigella flexneri 2002017 IS1 orfB YP_005727500.1 1910825 D 591020 CDS YP_005727501.1 384543438 12318585 1911330..1911464 1 NC_017328.1 hypothetical protein 1911464 12318585 SFxv_2036a Shigella flexneri 2002017 hypothetical protein YP_005727501.1 1911330 D 591020 CDS YP_005727502.1 384543439 12318586 complement(1911461..1911727) 1 NC_017328.1 hypothetical protein 1911727 12318586 SFxv_2037 Shigella flexneri 2002017 hypothetical protein YP_005727502.1 1911461 R 591020 CDS YP_005727503.1 384543440 12318587 1912001..1915525 1 NC_017328.1 putative oxidoreductase, Fe-S subunit 1915525 ydbK 12318587 ydbK Shigella flexneri 2002017 putative oxidoreductase, Fe-S subunit YP_005727503.1 1912001 D 591020 CDS YP_005727504.1 384543441 12318588 1915892..1916788 1 NC_017328.1 putative outer membrane protein 1b 1916788 ompN 12318588 ompN Shigella flexneri 2002017 putative outer membrane protein 1b YP_005727504.1 1915892 D 591020 CDS YP_005727505.1 384543442 12318589 1917090..1917596 1 NC_017328.1 Universal stress protein F 1917596 uspF 12318589 uspF Shigella flexneri 2002017 Universal stress protein F YP_005727505.1 1917090 D 591020 CDS YP_005727506.1 384543443 12318590 1917772..1918707 1 NC_017328.1 ATPase 1918707 ttcA 12318590 ttcA Shigella flexneri 2002017 ATPase YP_005727506.1 1917772 D 591020 CDS YP_005727507.1 384543444 12318591 complement(1918836..1920203) 1 NC_017328.1 ATP-dependent RNA helicase 1920203 dbpA 12318591 dbpA Shigella flexneri 2002017 ATP-dependent RNA helicase YP_005727507.1 1918836 R 591020 CDS YP_005727508.1 384543445 12318592 complement(1920681..1921664) 1 NC_017328.1 Zinc transport protein zntB 1921664 ydaN 12318592 ydaN Shigella flexneri 2002017 Zinc transport protein zntB YP_005727508.1 1920681 R 591020 CDS YP_005727509.1 384543446 12318595 complement(1923989..1925455) 1 NC_017328.1 multidrug resistant protein 1925455 12318595 SFxv_2046 Shigella flexneri 2002017 multidrug resistant protein YP_005727509.1 1923989 R 591020 CDS YP_005727510.1 384543447 12318596 complement(1925452..1925847) 1 NC_017328.1 putative secretion protein 1925847 12318596 SFxv_2047 Shigella flexneri 2002017 putative secretion protein YP_005727510.1 1925452 R 591020 CDS YP_005727511.1 384543448 12318597 1925960..1926148 1 NC_017328.1 fragment; IS1294 orf 1926148 12318597 SFxv_2048 Shigella flexneri 2002017 IS1294 orf YP_005727511.1 1925960 D 591020 CDS YP_005727512.1 384543449 12318598 complement(1926145..1926483) 1 NC_017328.1 hypothetical protein 1926483 12318598 SFxv_2050 Shigella flexneri 2002017 hypothetical protein YP_005727512.1 1926145 R 591020 CDS YP_005727513.1 384543450 12318599 1926158..1926982 1 NC_017328.1 IS1294 ORF 1926982 12318599 SFxv_2049 Shigella flexneri 2002017 IS1294 ORF YP_005727513.1 1926158 D 591020 CDS YP_005727514.1 384543451 12318600 complement(1926961..1927359) 1 NC_017328.1 putative IS1294 ORF 1927359 12318600 SFxv_2051 Shigella flexneri 2002017 putative IS1294 ORF YP_005727514.1 1926961 R 591020 CDS YP_005727515.1 384543452 12318601 complement(1927520..1928167) 1 NC_017328.1 putative secretion protein 1928167 12318601 SFxv_2052 Shigella flexneri 2002017 putative secretion protein YP_005727515.1 1927520 R 591020 CDS YP_005727516.1 384543453 12318602 1928264..1929079 1 NC_017328.1 AraC family transcriptional regulator 1929079 12318602 SFxv_2053 Shigella flexneri 2002017 AraC family transcriptional regulator YP_005727516.1 1928264 D 591020 CDS YP_005727517.1 384543454 12318603 1929409..1929612 1 NC_017328.1 hypothetical protein 1929612 12318603 SFxv_2054 Shigella flexneri 2002017 hypothetical protein YP_005727517.1 1929409 D 591020 CDS YP_005727518.1 384543455 12318605 1930331..1931083 1 NC_017328.1 Fumarate and nitrate reduction regulatory protein 1931083 fnr 12318605 fnr Shigella flexneri 2002017 Fumarate and nitrate reduction regulatory protein YP_005727518.1 1930331 D 591020 CDS YP_005727519.1 384543456 12318606 1931235..1932185 1 NC_017328.1 Universal stress protein E 1932185 uspE 12318606 uspE Shigella flexneri 2002017 Universal stress protein E YP_005727519.1 1931235 D 591020 CDS YP_005727520.1 384543457 12318608 complement(1932906..1933559) 1 NC_017328.1 IS911 orfA 1933559 12318608 SFxv_2059 Shigella flexneri 2002017 IS911 orfA YP_005727520.1 1932906 R 591020 CDS YP_005727521.1 384543458 12318609 1933521..1933943 1 NC_017328.1 IS91 orf 1933943 12318609 SFxv_2058 Shigella flexneri 2002017 IS91 orf YP_005727521.1 1933521 D 591020 CDS YP_005727522.1 384543459 12318610 complement(1933587..1933913) 1 NC_017328.1 IS91 orf 1933913 12318610 SFxv_2061 Shigella flexneri 2002017 IS91 orf YP_005727522.1 1933587 R 591020 CDS YP_005727523.1 384543460 12318611 1933898..1935130 1 NC_017328.1 IS91 ORF 1935130 12318611 SFxv_2060 Shigella flexneri 2002017 IS91 ORF YP_005727523.1 1933898 D 591020 CDS YP_005727524.1 384543461 12318612 complement(1935376..1935714) 1 NC_017328.1 putative transposase 1935714 12318612 SFxv_2062 Shigella flexneri 2002017 putative transposase YP_005727524.1 1935376 R 591020 CDS YP_005727525.1 384543462 12318613 1935806..1936837 1 NC_017328.1 MscS family inner membrane protein ynaI 1936837 ynaI 12318613 ynaI Shigella flexneri 2002017 MscS family inner membrane protein ynaI YP_005727525.1 1935806 D 591020 CDS YP_005727526.1 384543463 12318614 complement(1936888..1938522) 1 NC_017328.1 putative transport periplasmic protein 1938522 mppA 12318614 mppA Shigella flexneri 2002017 putative transport periplasmic protein YP_005727526.1 1936888 R 591020 CDS YP_005727527.1 384543464 12318615 complement(1938838..1939083) 1 NC_017328.1 putative transcriptional regulator 1939083 ycjZ 12318615 ycjZ Shigella flexneri 2002017 putative transcriptional regulator YP_005727527.1 1938838 R 591020 CDS YP_005727528.1 384543465 12318616 1939369..1939671 1 NC_017328.1 IS600 ORF1 1939671 12318616 SFxv_2066 Shigella flexneri 2002017 IS600 ORF1 YP_005727528.1 1939369 D 591020 CDS YP_005727529.1 384543466 12318617 complement(1939722..1940156) 1 NC_017328.1 IS629 ORF2 1940156 12318617 SFxv_2067 Shigella flexneri 2002017 IS629 ORF2 YP_005727529.1 1939722 R 591020 CDS YP_005727530.1 384543467 12318618 complement(1940591..1940917) 1 NC_017328.1 IS629 ORF1 1940917 12318618 SFxv_2070 Shigella flexneri 2002017 IS629 ORF1 YP_005727530.1 1940591 R 591020 CDS YP_005727531.1 384543468 12318619 1940879..1941820 1 NC_017328.1 IS600 ORF2 1941820 12318619 SFxv_2069 Shigella flexneri 2002017 IS600 ORF2 YP_005727531.1 1940879 D 591020 CDS YP_005727532.1 384543469 12318620 1941832..1942218 1 NC_017328.1 putative excisionase 1942218 12318620 SFxv_2071 Shigella flexneri 2002017 putative excisionase YP_005727532.1 1941832 D 591020 CDS YP_005727533.1 384543470 12318622 complement(1943654..1943995) 1 NC_017328.1 putative histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 1943995 yebY 12318622 yebY Shigella flexneri 2002017 putative histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase YP_005727533.1 1943654 R 591020 CDS YP_005727534.1 384543471 12318624 complement(1944884..1945258) 1 NC_017328.1 Protein yobA precursor 1945258 yobA 12318624 yobA Shigella flexneri 2002017 Protein yobA precursor YP_005727534.1 1944884 R 591020 CDS YP_005727535.1 384543472 12318625 1945397..1945627 1 NC_017328.1 DNA polymerase III subunit theta 1945627 holE 12318625 holE Shigella flexneri 2002017 DNA polymerase III subunit theta YP_005727535.1 1945397 D 591020 CDS YP_005727536.1 384543473 12318627 1946409..1947071 1 NC_017328.1 Exodeoxyribonuclease 10 1947071 exoX 12318627 exoX Shigella flexneri 2002017 Exodeoxyribonuclease 10 YP_005727536.1 1946409 D 591020 CDS YP_005727537.1 384543474 12318628 complement(1947068..1949128) 1 NC_017328.1 Protease II 1949128 ptrB 12318628 ptrB Shigella flexneri 2002017 Protease II YP_005727537.1 1947068 R 591020 CDS YP_005727538.1 384543475 12318629 complement(1949338..1949997) 1 NC_017328.1 hypothetical protein 1949997 12318629 SFxv_2080 Shigella flexneri 2002017 hypothetical protein YP_005727538.1 1949338 R 591020 CDS YP_005727539.1 384543476 12318630 complement(1950324..1950692) 1 NC_017328.1 Protein yebF precursor 1950692 yebF 12318630 yebF Shigella flexneri 2002017 Protein yebF precursor YP_005727539.1 1950324 R 591020 CDS YP_005727540.1 384543477 12318632 1951171..1952349 1 NC_017328.1 Phosphoribosylglycinamide formyltransferase 2 1952349 purT 12318632 purT Shigella flexneri 2002017 Phosphoribosylglycinamide formyltransferase 2 YP_005727540.1 1951171 D 591020 CDS YP_005727541.1 384543478 12318633 complement(1952405..1953046) 1 NC_017328.1 2-keto-3-deoxy-phosphogluconate aldolase 1953046 eda 12318633 eda Shigella flexneri 2002017 2-keto-3-deoxy-phosphogluconate aldolase YP_005727541.1 1952405 R 591020 CDS YP_005727542.1 384543479 12318634 complement(1953083..1954894) 1 NC_017328.1 6-phosphogluconate dehydratase 1954894 edd 12318634 edd Shigella flexneri 2002017 6-phosphogluconate dehydratase YP_005727542.1 1953083 R 591020 CDS YP_005727543.1 384543480 12318635 complement(1955129..1956604) 1 NC_017328.1 glucose-6-phosphate 1-dehydrogenase 1956604 zwf 12318635 zwf Shigella flexneri 2002017 glucose-6-phosphate 1-dehydrogenase YP_005727543.1 1955129 R 591020 CDS YP_005727544.1 384543481 12318636 complement(1956805..1956918) 1 NC_017328.1 hypothetical protein 1956918 12318636 SFxv_2086 Shigella flexneri 2002017 hypothetical protein YP_005727544.1 1956805 R 591020 CDS YP_005727545.1 384543482 12318637 1956941..1957810 1 NC_017328.1 HTH-type transcriptional regulator hexR 1957810 yebK 12318637 yebK Shigella flexneri 2002017 HTH-type transcriptional regulator hexR YP_005727545.1 1956941 D 591020 CDS YP_005727546.1 384543483 12318638 1957938..1959380 1 NC_017328.1 Pyruvate kinase II 1959380 pykA 12318638 pykA Shigella flexneri 2002017 Pyruvate kinase II YP_005727546.1 1957938 D 591020 CDS YP_005727547.1 384543484 12318639 complement(1959511..1960536) 1 NC_017328.1 Lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 1 1960536 lpxM 12318639 lpxM Shigella flexneri 2002017 Lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 1 YP_005727547.1 1959511 R 591020 CDS YP_005727548.1 384543485 12318640 complement(1960602..1961924) 1 NC_017328.1 hypothetical protein 1961924 12318640 SFxv_2090 Shigella flexneri 2002017 hypothetical protein YP_005727548.1 1960602 R 591020 CDS YP_005727549.1 384543486 12318641 complement(1961940..1962926) 1 NC_017328.1 putative adhesin 1962926 znuA 12318641 znuA Shigella flexneri 2002017 putative adhesin YP_005727549.1 1961940 R 591020 CDS YP_005727550.1 384543487 12318642 1962951..1963706 1 NC_017328.1 Zinc import ATP-binding protein znuC 1963706 znuC 12318642 znuC Shigella flexneri 2002017 Zinc import ATP-binding protein znuC YP_005727550.1 1962951 D 591020 CDS YP_005727551.1 384543488 12318643 1963703..1964488 1 NC_017328.1 High-affinity zinc uptake system membrane protein znuB 1964488 znuB 12318643 znuB Shigella flexneri 2002017 High-affinity zinc uptake system membrane protein znuB YP_005727551.1 1963703 D 591020 CDS YP_005727552.1 384543489 12318644 complement(1964635..1965645) 1 NC_017328.1 Holliday junction DNA helicase subunit RuvB 1965645 ruvB 12318644 ruvB Shigella flexneri 2002017 Holliday junction DNA helicase subunit RuvB YP_005727552.1 1964635 R 591020 CDS YP_005727553.1 384543490 12318645 complement(1965654..1966217) 1 NC_017328.1 Holliday junction DNA helicase subunit RuvA 1966217 ruvA 12318645 ruvA Shigella flexneri 2002017 Holliday junction DNA helicase subunit RuvA YP_005727553.1 1965654 R 591020 CDS YP_005727554.1 384543491 12318646 1966512..1967141 1 NC_017328.1 hypothetical protein 1967141 yebB 12318646 yebB Shigella flexneri 2002017 hypothetical protein YP_005727554.1 1966512 D 591020 CDS YP_005727555.1 384543492 12318647 complement(1967143..1967664) 1 NC_017328.1 Crossover junction endodeoxyribonuclease ruvC 1967664 ruvC 12318647 ruvC Shigella flexneri 2002017 Crossover junction endodeoxyribonuclease ruvC YP_005727555.1 1967143 R 591020 CDS YP_005727556.1 384543493 12318648 complement(1967699..1968439) 1 NC_017328.1 hypothetical protein 1968439 12318648 SFxv_2098 Shigella flexneri 2002017 hypothetical protein YP_005727556.1 1967699 R 591020 CDS YP_005727557.1 384543494 12318649 complement(1968468..1968950) 1 NC_017328.1 putative NTP pyrophosphohydrolases including oxidative damage repair enzyme 1968950 nudB 12318649 nudB Shigella flexneri 2002017 putative NTP pyrophosphohydrolases including oxidative damage repair enzyme YP_005727557.1 1968468 R 591020 CDS YP_005727558.1 384543495 12318650 complement(1969038..1970810) 1 NC_017328.1 Aspartyl-tRNA synthetase 1970810 aspS 12318650 aspS Shigella flexneri 2002017 Aspartyl-tRNA synthetase YP_005727558.1 1969038 R 591020 CDS YP_005727559.1 384543496 12318652 1973491..1973739 1 NC_017328.1 hypothetical protein 1973739 12318652 SFxv_2105 Shigella flexneri 2002017 hypothetical protein YP_005727559.1 1973491 D 591020 CDS YP_005727560.1 384543497 12318653 1974339..1976090 1 NC_017328.1 Invasion plasmid antigen 1976090 12318653 SFxv_2106 Shigella flexneri 2002017 Invasion plasmid antigen YP_005727560.1 1974339 D 591020 CDS YP_005727561.1 384543498 12318654 complement(1977195..1978298) 1 NC_017328.1 putative tail component encoded by cryptic prophage CP-933M 1978298 12318654 SFxv_2107 Shigella flexneri 2002017 putative tail component encoded by cryptic prophage CP-933M YP_005727561.1 1977195 R 591020 CDS YP_005727562.1 384543499 12318655 complement(1978320..1978919) 1 NC_017328.1 hypothetical protein 1978919 12318655 SFxv_2108 Shigella flexneri 2002017 hypothetical protein YP_005727562.1 1978320 R 591020 CDS YP_005727563.1 384543500 12318656 complement(1978987..1982466) 1 NC_017328.1 Host specificity protein 1982466 12318656 SFxv_2109 Shigella flexneri 2002017 Host specificity protein YP_005727563.1 1978987 R 591020 CDS YP_005727564.1 384543501 12318657 complement(1982527..1983129) 1 NC_017328.1 putative tail component 1983129 12318657 SFxv_2110 Shigella flexneri 2002017 putative tail component YP_005727564.1 1982527 R 591020 CDS YP_005727565.1 384543502 12318658 complement(1983066..1983878) 1 NC_017328.1 Tail assembly protein 1983878 12318658 SFxv_2111 Shigella flexneri 2002017 Tail assembly protein YP_005727565.1 1983066 R 591020 CDS YP_005727566.1 384543503 12318659 complement(1983814..1984512) 1 NC_017328.1 Minor tail protein 1984512 12318659 SFxv_2112 Shigella flexneri 2002017 Minor tail protein YP_005727566.1 1983814 R 591020 CDS YP_005727567.1 384543504 12318660 complement(1984841..1987882) 1 NC_017328.1 putative tail length tape measure protein 1987882 12318660 SFxv_2113 Shigella flexneri 2002017 putative tail length tape measure protein YP_005727567.1 1984841 R 591020 CDS YP_005727568.1 384543505 12318661 complement(1987854..1988183) 1 NC_017328.1 putative tail component of prophage CP-933K 1988183 12318661 SFxv_2114 Shigella flexneri 2002017 putative tail component of prophage CP-933K YP_005727568.1 1987854 R 591020 CDS YP_005727569.1 384543506 12318662 complement(1988192..1988596) 1 NC_017328.1 putative tail component of prophage CP-933K 1988596 12318662 SFxv_2115 Shigella flexneri 2002017 putative tail component of prophage CP-933K YP_005727569.1 1988192 R 591020 CDS YP_005727570.1 384543507 12318663 complement(1988637..1989383) 1 NC_017328.1 putative tail component of prophage CP-933K 1989383 12318663 SFxv_2116 Shigella flexneri 2002017 putative tail component of prophage CP-933K YP_005727570.1 1988637 R 591020 CDS YP_005727571.1 384543508 12318664 complement(1989388..1989789) 1 NC_017328.1 putative tail component of prophage CP-933K 1989789 12318664 SFxv_2117 Shigella flexneri 2002017 putative tail component of prophage CP-933K YP_005727571.1 1989388 R 591020 CDS YP_005727572.1 384543509 12318665 complement(1989786..1990376) 1 NC_017328.1 putative tail component of prophage CP-933K 1990376 12318665 SFxv_2118 Shigella flexneri 2002017 putative tail component of prophage CP-933K YP_005727572.1 1989786 R 591020 CDS YP_005727573.1 384543510 12318666 complement(1990363..1990734) 1 NC_017328.1 putative tail attachment protein 1990734 12318666 SFxv_2119 Shigella flexneri 2002017 putative tail attachment protein YP_005727573.1 1990363 R 591020 CDS YP_005727574.1 384543511 12318667 complement(1990746..1991147) 1 NC_017328.1 putative DNA-packaging protein 1991147 12318667 SFxv_2120 Shigella flexneri 2002017 putative DNA-packaging protein YP_005727574.1 1990746 R 591020 CDS YP_005727575.1 384543512 12318668 1991411..1992607 1 NC_017328.1 ISSfl2 ORF 1992607 12318668 SFxv_2121 Shigella flexneri 2002017 ISSfl2 ORF YP_005727575.1 1991411 D 591020 CDS YP_005727576.1 384543513 12318673 complement(1993793..1994482) 1 NC_017328.1 putative Q antiterminator encoded by prophage CP-933P 1994482 12318673 SFxv_2122 Shigella flexneri 2002017 putative Q antiterminator encoded by prophage CP-933P YP_005727576.1 1993793 R 591020 CDS YP_005727577.1 384543514 12318674 complement(1994479..1994838) 1 NC_017328.1 putative crossover junction endodeoxyribonuclease 1994838 12318674 SFxv_2123 Shigella flexneri 2002017 putative crossover junction endodeoxyribonuclease YP_005727577.1 1994479 R 591020 CDS YP_005727578.1 384543515 12318675 complement(1994838..1995026) 1 NC_017328.1 putative bacteriophage protein 1995026 12318675 SFxv_2124 Shigella flexneri 2002017 putative bacteriophage protein YP_005727578.1 1994838 R 591020 CDS YP_005727579.1 384543516 12318676 1995219..1996181 1 NC_017328.1 ISSd1, transposase orfA/B, fusion 1996181 12318676 SFxv_2125 Shigella flexneri 2002017 ISSd1, transposase orfA/B, fusion YP_005727579.1 1995219 D 591020 CDS YP_005727580.1 384543517 12318677 1996679..1997506 1 NC_017328.1 putative serine protease 1997506 12318677 SFxv_2127 Shigella flexneri 2002017 putative serine protease YP_005727580.1 1996679 D 591020 CDS YP_005727581.1 384543518 12318678 1997550..1998299 1 NC_017328.1 hypothetical protein 1998299 12318678 SFxv_2128 Shigella flexneri 2002017 hypothetical protein YP_005727581.1 1997550 D 591020 CDS YP_005727582.1 384543519 12318679 1998296..1998865 1 NC_017328.1 hypothetical protein 1998865 12318679 SFxv_2129 Shigella flexneri 2002017 hypothetical protein YP_005727582.1 1998296 D 591020 CDS YP_005727583.1 384543520 12318680 1998989..1999231 1 NC_017328.1 hypothetical protein 1999231 12318680 SFxv_2130 Shigella flexneri 2002017 hypothetical protein YP_005727583.1 1998989 D 591020 CDS YP_005727584.1 384543521 12318681 1999235..1999381 1 NC_017328.1 putative bacteriophage protein 1999381 12318681 SFxv_2131 Shigella flexneri 2002017 putative bacteriophage protein YP_005727584.1 1999235 D 591020 CDS YP_005727585.1 384543522 12318682 complement(1999562..2000401) 1 NC_017328.1 IS911 orfA 2000401 12318682 SFxv_2132 Shigella flexneri 2002017 IS911 orfA YP_005727585.1 1999562 R 591020 CDS YP_005727586.1 384543523 12318683 2000960..2001310 1 NC_017328.1 hypothetical protein 2001310 yecE 12318683 yecE Shigella flexneri 2002017 hypothetical protein YP_005727586.1 2000960 D 591020 CDS YP_005727587.1 384543524 12318684 2001405..2001758 1 NC_017328.1 Inner membrane protein yecN 2001758 yecN 12318684 yecN Shigella flexneri 2002017 Inner membrane protein yecN YP_005727587.1 2001405 D 591020 CDS YP_005727588.1 384543525 12318685 2001799..2002542 1 NC_017328.1 tRNA (cmo5U34)-methyltransferase 2002542 cmoA 12318685 cmoA Shigella flexneri 2002017 tRNA (cmo5U34)-methyltransferase YP_005727588.1 2001799 D 591020 CDS YP_005727589.1 384543526 12318686 2002539..2003510 1 NC_017328.1 tRNA (mo5U34)-methyltransferase 2003510 cmoB 12318686 cmoB Shigella flexneri 2002017 tRNA (mo5U34)-methyltransferase YP_005727589.1 2002539 D 591020 CDS YP_005727590.1 384543527 12318687 complement(2003675..2006122) 1 NC_017328.1 Biotin sulfoxide reductase 2 2006122 torZ 12318687 torZ Shigella flexneri 2002017 Biotin sulfoxide reductase 2 YP_005727590.1 2003675 R 591020 CDS YP_005727591.1 384543528 12318688 complement(2006129..2007229) 1 NC_017328.1 putative cytochrome C-type protein 2007229 torY 12318688 torY Shigella flexneri 2002017 putative cytochrome C-type protein YP_005727591.1 2006129 R 591020 CDS YP_005727592.1 384543529 12318689 complement(2007617..2008363) 1 NC_017328.1 Copper homeostasis protein cutC 2008363 cutC 12318689 cutC Shigella flexneri 2002017 Copper homeostasis protein cutC YP_005727592.1 2007617 R 591020 CDS YP_005727593.1 384543530 12318690 complement(2008377..2008949) 1 NC_017328.1 hypothetical protein 2008949 12318690 SFxv_2140 Shigella flexneri 2002017 hypothetical protein YP_005727593.1 2008377 R 591020 CDS YP_005727594.1 384543531 12318691 2009159..2010892 1 NC_017328.1 arginyl-tRNA synthetase 2010892 argS 12318691 argS Shigella flexneri 2002017 arginyl-tRNA synthetase YP_005727594.1 2009159 D 591020 CDS YP_005727595.1 384543532 12318692 2011069..2011557 1 NC_017328.1 hypothetical protein 2011557 12318692 SFxv_2142 Shigella flexneri 2002017 hypothetical protein YP_005727595.1 2011069 D 591020 CDS YP_005727596.1 384543533 12318693 complement(2011777..2012211) 1 NC_017328.1 IS629 ORF2 2012211 12318693 SFxv_2143 Shigella flexneri 2002017 IS629 ORF2 YP_005727596.1 2011777 R 591020 CDS YP_005727597.1 384543534 12318694 complement(2012646..2012972) 1 NC_017328.1 IS629 ORF1 2012972 12318694 SFxv_2145 Shigella flexneri 2002017 IS629 ORF1 YP_005727597.1 2012646 R 591020 CDS YP_005727598.1 384543535 12318695 complement(2013024..2013362) 1 NC_017328.1 Flagellar protein 2013362 flhE 12318695 flhE Shigella flexneri 2002017 Flagellar protein YP_005727598.1 2013024 R 591020 CDS YP_005727599.1 384543536 12318697 complement(2015386..2016579) 1 NC_017328.1 putative part of export apparatus for flagellar proteins 2016579 flhA-2 12318697 flhA-2 Shigella flexneri 2002017 putative part of export apparatus for flagellar proteins YP_005727599.1 2015386 R 591020 CDS YP_005727600.1 384543537 12318698 2016815..2017273 1 NC_017328.1 hypothetical protein 2017273 12318698 SFxv_2149 Shigella flexneri 2002017 hypothetical protein YP_005727600.1 2016815 D 591020 CDS YP_005727601.1 384543538 12318699 complement(2017208..2018047) 1 NC_017328.1 IS911 orfA 2018047 12318699 SFxv_2150 Shigella flexneri 2002017 IS911 orfA YP_005727601.1 2017208 R 591020 CDS YP_005727602.1 384543539 12318700 2018517..2018912 1 NC_017328.1 hypothetical protein 2018912 12318700 SFxv_2151 Shigella flexneri 2002017 hypothetical protein YP_005727602.1 2018517 D 591020 CDS YP_005727603.1 384543540 12318701 2019302..2020120 1 NC_017328.1 ISSd1, transposase orfA/B, fusion 2020120 12318701 SFxv_2152 Shigella flexneri 2002017 ISSd1, transposase orfA/B, fusion YP_005727603.1 2019302 D 591020 CDS YP_005727604.1 384543541 12318702 2020132..2020536 1 NC_017328.1 hypothetical protein 2020536 12318702 SFxv_2153 Shigella flexneri 2002017 hypothetical protein YP_005727604.1 2020132 D 591020 CDS YP_005727605.1 384543542 12318703 complement(2020624..2021268) 1 NC_017328.1 Chemotaxis protein CheZ 2021268 cheZ 12318703 cheZ Shigella flexneri 2002017 Chemotaxis protein CheZ YP_005727605.1 2020624 R 591020 CDS YP_005727606.1 384543543 12318704 complement(2021279..2021668) 1 NC_017328.1 Chemotaxis protein cheY 2021668 cheY 12318704 cheY Shigella flexneri 2002017 Chemotaxis protein cheY YP_005727606.1 2021279 R 591020 CDS YP_005727607.1 384543544 12318705 complement(2021683..2022732) 1 NC_017328.1 Chemotaxis response regulator protein-glutamate methylesterase 2022732 cheB 12318705 cheB Shigella flexneri 2002017 Chemotaxis response regulator protein-glutamate methylesterase YP_005727607.1 2021683 R 591020 CDS YP_005727608.1 384543545 12318706 complement(2022735..2023595) 1 NC_017328.1 Response regulator for chemotaxis; protein glutamate methyltransferase 2023595 cheR 12318706 cheR Shigella flexneri 2002017 Response regulator for chemotaxis; protein glutamate methyltransferase YP_005727608.1 2022735 R 591020 CDS YP_005727609.1 384543546 12318707 complement(2023614..2025215) 1 NC_017328.1 Methyl-accepting chemotaxis protein IV, peptide sensor receptor 2025215 tap 12318707 tap Shigella flexneri 2002017 Methyl-accepting chemotaxis protein IV, peptide sensor receptor YP_005727609.1 2023614 R 591020 CDS YP_005727610.1 384543547 12318708 complement(2025261..2026922) 1 NC_017328.1 Methyl-accepting chemotaxis protein II, aspartate sensor receptor 2026922 tar 12318708 tar Shigella flexneri 2002017 Methyl-accepting chemotaxis protein II, aspartate sensor receptor YP_005727610.1 2025261 R 591020 CDS YP_005727611.1 384543548 12318709 complement(2027067..2027570) 1 NC_017328.1 putative Chemotaxis signal transduction protein 2027570 cheW 12318709 cheW Shigella flexneri 2002017 putative Chemotaxis signal transduction protein YP_005727611.1 2027067 R 591020 CDS YP_005727612.1 384543549 12318710 complement(2027591..2029555) 1 NC_017328.1 Chemotaxis protein CheA 2029555 cheA 12318710 cheA Shigella flexneri 2002017 Chemotaxis protein CheA YP_005727612.1 2027591 R 591020 CDS YP_005727613.1 384543550 12318711 complement(2029560..2030486) 1 NC_017328.1 Chemotaxis protein MotB 2030486 motB 12318711 motB Shigella flexneri 2002017 Chemotaxis protein MotB YP_005727613.1 2029560 R 591020 CDS YP_005727614.1 384543551 12318712 complement(2030483..2031370) 1 NC_017328.1 Proton conductor component of motor 2031370 motA 12318712 motA Shigella flexneri 2002017 Proton conductor component of motor YP_005727614.1 2030483 R 591020 CDS YP_005727615.1 384543552 12318713 complement(2031497..2032075) 1 NC_017328.1 Flagellar transcriptional activator flhC 2032075 flhC 12318713 flhC Shigella flexneri 2002017 Flagellar transcriptional activator flhC YP_005727615.1 2031497 R 591020 CDS YP_005727616.1 384543553 12318714 complement(2032078..2032296) 1 NC_017328.1 Transcriptional activator flhD 2032296 flhD 12318714 flhD Shigella flexneri 2002017 Transcriptional activator flhD YP_005727616.1 2032078 R 591020 CDS YP_005727617.1 384543554 12318715 complement(2032194..2032457) 1 NC_017328.1 IS600 ORF2 2032457 12318715 SFxv_2166 Shigella flexneri 2002017 IS600 ORF2 YP_005727617.1 2032194 R 591020 CDS YP_005727618.1 384543555 12318716 2032532..2033035 1 NC_017328.1 IS1 ORF2 2033035 12318716 SFxv_2167 Shigella flexneri 2002017 IS1 ORF2 YP_005727618.1 2032532 D 591020 CDS YP_005727619.1 384543556 12318717 complement(2033029..2033223) 1 NC_017328.1 trehalose-6-phosphate synthase 2033223 otsA 12318717 otsA Shigella flexneri 2002017 trehalose-6-phosphate synthase YP_005727619.1 2033029 R 591020 CDS YP_005727620.1 384543557 12318718 complement(2033473..2034273) 1 NC_017328.1 Trehalose-6-phosphate phophatase 2034273 otsB 12318718 otsB Shigella flexneri 2002017 Trehalose-6-phosphate phophatase YP_005727620.1 2033473 R 591020 CDS YP_005727621.1 384543558 12318719 complement(2034440..2035429) 1 NC_017328.1 L-arabinose transport system permease protein araH 2035429 araH 12318719 araH Shigella flexneri 2002017 L-arabinose transport system permease protein araH YP_005727621.1 2034440 R 591020 CDS YP_005727622.1 384543559 12318720 complement(2035441..2037000) 1 NC_017328.1 arabinose ABC transporter ATP-binding protein 2037000 araG 12318720 araG Shigella flexneri 2002017 arabinose ABC transporter ATP-binding protein YP_005727622.1 2035441 R 591020 CDS YP_005727623.1 384543560 12318722 2038811..2039314 1 NC_017328.1 Ferritin-like protein 2 2039314 ftnB 12318722 ftnB Shigella flexneri 2002017 Ferritin-like protein 2 YP_005727623.1 2038811 D 591020 CDS YP_005727624.1 384543561 12318723 2039289..2039669 1 NC_017328.1 hypothetical protein 2039669 12318723 SFxv_2173 Shigella flexneri 2002017 hypothetical protein YP_005727624.1 2039289 D 591020 CDS YP_005727625.1 384543562 12318724 2039757..2039903 1 NC_017328.1 hypothetical protein 2039903 12318724 SFxv_2175 Shigella flexneri 2002017 hypothetical protein YP_005727625.1 2039757 D 591020 CDS YP_005727626.1 384543563 12318725 2040109..2040432 1 NC_017328.1 hypothetical protein 2040432 12318725 SFxv_2176 Shigella flexneri 2002017 hypothetical protein YP_005727626.1 2040109 D 591020 CDS YP_005727627.1 384543564 12318726 2040603..2041100 1 NC_017328.1 Ferritin-1 2041100 ftnA 12318726 ftnA Shigella flexneri 2002017 Ferritin-1 YP_005727627.1 2040603 D 591020 CDS YP_005727628.1 384543565 12318727 complement(2041137..2041376) 1 NC_017328.1 hypothetical protein 2041376 12318727 SFxv_2180 Shigella flexneri 2002017 hypothetical protein YP_005727628.1 2041137 R 591020 CDS YP_005727629.1 384543566 12318728 2041566..2042777 1 NC_017328.1 tyrosine-specific transporter 2042777 tyrP 12318728 tyrP Shigella flexneri 2002017 tyrosine-specific transporter YP_005727629.1 2041566 D 591020 CDS YP_005727630.1 384543567 12318729 complement(2042839..2043504) 1 NC_017328.1 hypothetical protein 2043504 yecA 12318729 yecA Shigella flexneri 2002017 hypothetical protein YP_005727630.1 2042839 R 591020 CDS YP_005727631.1 384543568 12318733 complement(2044153..2044701) 1 NC_017328.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2044701 pgsA 12318733 pgsA Shigella flexneri 2002017 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_005727631.1 2044153 R 591020 CDS YP_005727632.1 384543569 12318734 complement(2044758..2046590) 1 NC_017328.1 UvrABC system protein C 2046590 uvrC 12318734 uvrC Shigella flexneri 2002017 UvrABC system protein C YP_005727632.1 2044758 R 591020 CDS YP_005727633.1 384543570 12318735 complement(2046587..2047243) 1 NC_017328.1 Response regulator uvrY 2047243 uvrY 12318735 uvrY Shigella flexneri 2002017 Response regulator uvrY YP_005727633.1 2046587 R 591020 CDS YP_005727634.1 384543571 12318736 2047702..2047926 1 NC_017328.1 hypothetical protein 2047926 yecF 12318736 yecF Shigella flexneri 2002017 hypothetical protein YP_005727634.1 2047702 D 591020 CDS YP_005727635.1 384543572 12318737 complement(2047953..2048579) 1 NC_017328.1 Regulatory protein SdiA 2048579 sdiA 12318737 sdiA Shigella flexneri 2002017 Regulatory protein SdiA YP_005727635.1 2047953 R 591020 CDS YP_005727636.1 384543573 12318738 complement(2048809..2049561) 1 NC_017328.1 ATPase 2049561 yecC 12318738 yecC Shigella flexneri 2002017 ATPase YP_005727636.1 2048809 R 591020 CDS YP_005727637.1 384543574 12318739 complement(2049558..2050226) 1 NC_017328.1 putative transport system permease 2050226 yecS 12318739 yecS Shigella flexneri 2002017 putative transport system permease YP_005727637.1 2049558 R 591020 CDS YP_005727638.1 384543575 12318740 complement(2050241..2051227) 1 NC_017328.1 putative 1-aminocyclopropane-1-carboxylate deaminase 2051227 dcyD 12318740 dcyD Shigella flexneri 2002017 putative 1-aminocyclopropane-1-carboxylate deaminase YP_005727638.1 2050241 R 591020 CDS YP_005727639.1 384543576 12318741 complement(2051332..2052189) 1 NC_017328.1 periplasmic glutamine-binding protein; permease 2052189 fliY 12318741 fliY Shigella flexneri 2002017 periplasmic glutamine-binding protein; permease YP_005727639.1 2051332 R 591020 CDS YP_005727640.1 384543577 12318742 complement(2052220..2052807) 1 NC_017328.1 putative regulator of FliA 2052807 fliZ 12318742 fliZ Shigella flexneri 2002017 putative regulator of FliA YP_005727640.1 2052220 R 591020 CDS YP_005727641.1 384543578 12318744 complement(2053701..2055353) 1 NC_017328.1 Flagellin 2055353 fliC 12318744 fliC Shigella flexneri 2002017 Flagellin YP_005727641.1 2053701 R 591020 CDS YP_005727642.1 384543579 12318745 2055619..2057025 1 NC_017328.1 Flagellar filament capping protein 2057025 fliD 12318745 fliD Shigella flexneri 2002017 Flagellar filament capping protein YP_005727642.1 2055619 D 591020 CDS YP_005727643.1 384543580 12318746 2057050..2057460 1 NC_017328.1 Flagellar protein FliS 2057460 fliS 12318746 fliS Shigella flexneri 2002017 Flagellar protein FliS YP_005727643.1 2057050 D 591020 CDS YP_005727644.1 384543581 12318747 2057460..2057825 1 NC_017328.1 Flagellar protein FliT 2057825 fliT 12318747 fliT Shigella flexneri 2002017 Flagellar protein FliT YP_005727644.1 2057460 D 591020 CDS YP_005727645.1 384543582 12318748 2057903..2059390 1 NC_017328.1 Cytoplasmic alpha-amylase 2059390 amyA 12318748 amyA Shigella flexneri 2002017 Cytoplasmic alpha-amylase YP_005727645.1 2057903 D 591020 CDS YP_005727646.1 384543583 12318749 complement(2059424..2059807) 1 NC_017328.1 putative lipoprotein 2059807 yedD 12318749 yedD Shigella flexneri 2002017 putative lipoprotein YP_005727646.1 2059424 R 591020 CDS YP_005727647.1 384543584 12318750 2060024..2061229 1 NC_017328.1 putative transport system permease 2061229 yedE 12318750 yedE Shigella flexneri 2002017 putative transport system permease YP_005727647.1 2060024 D 591020 CDS YP_005727648.1 384543585 12318752 complement(2062276..2063082) 1 NC_017328.1 Transposase, IS605 OrfB family 2063082 12318752 SFxv_2203 Shigella flexneri 2002017 Transposase, IS605 OrfB family YP_005727648.1 2062276 R 591020 CDS YP_005727649.1 384543586 12318753 complement(2063778..2063906) 1 NC_017328.1 hypothetical protein 2063906 12318753 SFxv_2205 Shigella flexneri 2002017 hypothetical protein YP_005727649.1 2063778 R 591020 CDS YP_005727650.1 384543587 12318754 2063832..2064167 1 NC_017328.1 putative transposase TnpA of insertion sequence IS609 2064167 12318754 SFxv_2204 Shigella flexneri 2002017 putative transposase TnpA of insertion sequence IS609 YP_005727650.1 2063832 D 591020 CDS YP_005727651.1 384543588 12318755 2064495..2065577 1 NC_017328.1 putative outer membrane porin protein C precurser 2065577 12318755 SFxv_2206 Shigella flexneri 2002017 putative outer membrane porin protein C precurser YP_005727651.1 2064495 D 591020 CDS YP_005727652.1 384543589 12318756 complement(2066127..2066864) 1 NC_017328.1 putative ARAC-type regulatory protein 2066864 ybcM 12318756 ybcM Shigella flexneri 2002017 putative ARAC-type regulatory protein YP_005727652.1 2066127 R 591020 CDS YP_005727653.1 384543590 12318757 complement(2066874..2067425) 1 NC_017328.1 putative phosphatidylethanolamine-binding protein 2067425 ybcL 12318757 ybcL Shigella flexneri 2002017 putative phosphatidylethanolamine-binding protein YP_005727653.1 2066874 R 591020 CDS YP_005727654.1 384543591 12318758 complement(2067594..2068091) 1 NC_017328.1 EmrE SMR transporter 2068091 12318758 SFxv_2210 Shigella flexneri 2002017 EmrE SMR transporter YP_005727654.1 2067594 R 591020 CDS YP_005727655.1 384543592 12318759 complement(2068271..2068585) 1 NC_017328.1 Flagellar hook-basal body complex protein fliE 2068585 fliE 12318759 fliE Shigella flexneri 2002017 Flagellar hook-basal body complex protein fliE YP_005727655.1 2068271 R 591020 CDS YP_005727656.1 384543593 12318761 2070453..2071448 1 NC_017328.1 flagellar motor switch protein FliG 2071448 fliG 12318761 fliG Shigella flexneri 2002017 flagellar motor switch protein FliG YP_005727656.1 2070453 D 591020 CDS YP_005727657.1 384543594 12318762 2071441..2072127 1 NC_017328.1 Flagellar assembly protein FliH 2072127 fliH 12318762 fliH Shigella flexneri 2002017 Flagellar assembly protein FliH YP_005727657.1 2071441 D 591020 CDS YP_005727658.1 384543595 12318763 2072127..2073500 1 NC_017328.1 Flagellum-specific ATP synthase 2073500 fliI 12318763 fliI Shigella flexneri 2002017 Flagellum-specific ATP synthase YP_005727658.1 2072127 D 591020 CDS YP_005727659.1 384543596 12318764 2073519..2073863 1 NC_017328.1 Flagellar export protein FliJ 2073863 fliJ 12318764 fliJ Shigella flexneri 2002017 Flagellar export protein FliJ YP_005727659.1 2073519 D 591020 CDS YP_005727660.1 384543597 12318765 2073860..2074987 1 NC_017328.1 Flagellar hook-length control protein 2074987 fliK 12318765 fliK Shigella flexneri 2002017 Flagellar hook-length control protein YP_005727660.1 2073860 D 591020 CDS YP_005727661.1 384543598 12318766 2075092..2075556 1 NC_017328.1 putative Flagellar basal body-associated protein 2075556 fliL 12318766 fliL Shigella flexneri 2002017 putative Flagellar basal body-associated protein YP_005727661.1 2075092 D 591020 CDS YP_005727662.1 384543599 12318767 2075516..2076565 1 NC_017328.1 Flagellar motor switch protein FliM 2076565 fliM 12318767 fliM Shigella flexneri 2002017 Flagellar motor switch protein FliM YP_005727662.1 2075516 D 591020 CDS YP_005727663.1 384543600 12318768 2076562..2076975 1 NC_017328.1 Flagellar motor switch protein FliN 2076975 fliN 12318768 fliN Shigella flexneri 2002017 Flagellar motor switch protein FliN YP_005727663.1 2076562 D 591020 CDS YP_005727664.1 384543601 12318769 2076978..2077343 1 NC_017328.1 Flagellar protein fliO 2077343 fliO 12318769 fliO Shigella flexneri 2002017 Flagellar protein fliO YP_005727664.1 2076978 D 591020 CDS YP_005727665.1 384543602 12318771 2078091..2078360 1 NC_017328.1 Flagellar biosynthetic protein fliQ 2078360 fliQ 12318771 fliQ Shigella flexneri 2002017 Flagellar biosynthetic protein fliQ YP_005727665.1 2078091 D 591020 CDS YP_005727666.1 384543603 12318772 2078369..2079154 1 NC_017328.1 Flagellar biosynthetic protein FliR 2079154 fliR 12318772 fliR Shigella flexneri 2002017 Flagellar biosynthetic protein FliR YP_005727666.1 2078369 D 591020 CDS YP_005727667.1 384543604 12318773 2079439..2080062 1 NC_017328.1 Positive regulator for ctr capsule biosynthesis, positive transcription factor 2080062 rcsA 12318773 rcsA Shigella flexneri 2002017 Positive regulator for ctr capsule biosynthesis, positive transcription factor YP_005727667.1 2079439 D 591020 CDS YP_005727668.1 384543605 12318774 complement(2080106..2080354) 1 NC_017328.1 Protein dsrB 2080354 dsrB 12318774 dsrB Shigella flexneri 2002017 Protein dsrB YP_005727668.1 2080106 R 591020 CDS YP_005727669.1 384543606 12318775 2080442..2080684 1 NC_017328.1 hypothetical protein 2080684 12318775 SFxv_2227 Shigella flexneri 2002017 hypothetical protein YP_005727669.1 2080442 D 591020 CDS YP_005727670.1 384543607 12318778 complement(2083659..2083841) 1 NC_017328.1 hypothetical protein 2083841 12318778 SFxv_2230 Shigella flexneri 2002017 hypothetical protein YP_005727670.1 2083659 R 591020 CDS YP_005727671.1 384543608 12318779 complement(2083920..2084831) 1 NC_017328.1 Inner membrane protein yedI 2084831 yedI 12318779 yedI Shigella flexneri 2002017 Inner membrane protein yedI YP_005727671.1 2083920 R 591020 CDS YP_005727672.1 384543609 12318780 2085010..2085930 1 NC_017328.1 putative transmembrane subunit 2085930 yedA 12318780 yedA Shigella flexneri 2002017 putative transmembrane subunit YP_005727672.1 2085010 D 591020 CDS YP_005727673.1 384543610 12318781 complement(2085919..2086389) 1 NC_017328.1 DNA mismatch endonuclease, patch repair protein 2086389 vsr 12318781 vsr Shigella flexneri 2002017 DNA mismatch endonuclease, patch repair protein YP_005727673.1 2085919 R 591020 CDS YP_005727674.1 384543611 12318782 complement(2086370..2087788) 1 NC_017328.1 cytosine-specific methyltransferase 2087788 dcm 12318782 dcm Shigella flexneri 2002017 cytosine-specific methyltransferase YP_005727674.1 2086370 R 591020 CDS YP_005727675.1 384543612 12318783 complement(2087901..2088356) 1 NC_017328.1 putative HD superfamily hydrolase 2088356 yedJ 12318783 yedJ Shigella flexneri 2002017 putative HD superfamily hydrolase YP_005727675.1 2087901 R 591020 CDS YP_005727676.1 384543613 12318784 complement(2088435..2088674) 1 NC_017328.1 hypothetical protein 2088674 12318784 SFxv_2235a Shigella flexneri 2002017 hypothetical protein YP_005727676.1 2088435 R 591020 CDS YP_005727677.1 384543614 12318785 complement(2088693..2089505) 1 NC_017328.1 ISEhe3, transposase orfB 2089505 12318785 SFxv_2236 Shigella flexneri 2002017 ISEhe3, transposase orfB YP_005727677.1 2088693 R 591020 CDS YP_005727678.1 384543615 12318786 complement(2089562..2089846) 1 NC_017328.1 putative transposase ykgN 2089846 12318786 SFxv_2237 Shigella flexneri 2002017 putative transposase ykgN YP_005727678.1 2089562 R 591020 CDS YP_005727679.1 384543616 12318787 2089867..2090754 1 NC_017328.1 hypothetical protein 2090754 12318787 SFxv_2238 Shigella flexneri 2002017 hypothetical protein YP_005727679.1 2089867 D 591020 CDS YP_005727680.1 384543617 12318788 complement(2090679..2091584) 1 NC_017328.1 IS2 orfB 2091584 12318788 SFxv_2241 Shigella flexneri 2002017 IS2 orfB YP_005727680.1 2090679 R 591020 CDS YP_005727681.1 384543618 12318789 2091108..2091446 1 NC_017328.1 putative IS2 ORF 2091446 12318789 SFxv_2239 Shigella flexneri 2002017 putative IS2 ORF YP_005727681.1 2091108 D 591020 CDS YP_005727682.1 384543619 12318790 2091572..2091772 1 NC_017328.1 hypothetical protein 2091772 12318790 SFxv_2240 Shigella flexneri 2002017 hypothetical protein YP_005727682.1 2091572 D 591020 CDS YP_005727683.1 384543620 12318791 2091971..2092180 1 NC_017328.1 putative outer membrane protein 2092180 12318791 SFxv_2243 Shigella flexneri 2002017 putative outer membrane protein YP_005727683.1 2091971 D 591020 CDS YP_005727684.1 384543621 12318792 complement(2092652..2092927) 1 NC_017328.1 putative IS1 encoded protein 2092927 12318792 SFxv_2244 Shigella flexneri 2002017 putative IS1 encoded protein YP_005727684.1 2092652 R 591020 CDS YP_005727685.1 384543622 12318793 2093002..2093505 1 NC_017328.1 IS1 ORF2 2093505 12318793 SFxv_2245 Shigella flexneri 2002017 IS1 ORF2 YP_005727685.1 2093002 D 591020 CDS YP_005727686.1 384543623 12318794 2093551..2094402 1 NC_017328.1 Chaperone protein hchA 2094402 hchA 12318794 hchA Shigella flexneri 2002017 Chaperone protein hchA YP_005727686.1 2093551 D 591020 CDS YP_005727687.1 384543624 12318795 complement(2094510..2095868) 1 NC_017328.1 putative Sensor protein 2095868 yedV 12318795 yedV Shigella flexneri 2002017 putative Sensor protein YP_005727687.1 2094510 R 591020 CDS YP_005727688.1 384543625 12318796 complement(2095868..2096650) 1 NC_017328.1 Two component heavy metal response transcriptional regulator, winged helix family precursor 2096650 yedW 12318796 yedW Shigella flexneri 2002017 Two component heavy metal response transcriptional regulator, winged helix family precursor YP_005727688.1 2095868 R 591020 CDS YP_005727689.1 384543626 12318797 2096672..2097085 1 NC_017328.1 Transthyretin 2097085 yedX 12318797 yedX Shigella flexneri 2002017 Transthyretin YP_005727689.1 2096672 D 591020 CDS YP_005727690.1 384543627 12318799 2098199..2098834 1 NC_017328.1 membrane protein yedZ 2098834 yedZ 12318799 yedZ Shigella flexneri 2002017 membrane protein yedZ YP_005727690.1 2098199 D 591020 CDS YP_005727691.1 384543628 12318800 2099092..2099742 1 NC_017328.1 hypothetical protein 2099742 12318800 SFxv_2252 Shigella flexneri 2002017 hypothetical protein YP_005727691.1 2099092 D 591020 CDS YP_005727692.1 384543629 12318801 complement(2100668..2100847) 1 NC_017328.1 hypothetical protein 2100847 12318801 SFxv_2253 Shigella flexneri 2002017 hypothetical protein YP_005727692.1 2100668 R 591020 CDS YP_005727693.1 384543630 12318802 complement(2100820..2101089) 1 NC_017328.1 putative bacteriophage protein 2101089 12318802 SFxv_2254 Shigella flexneri 2002017 putative bacteriophage protein YP_005727693.1 2100820 R 591020 CDS YP_005727694.1 384543631 12318803 2101146..2101814 1 NC_017328.1 hypothetical protein 2101814 12318803 SFxv_2255 Shigella flexneri 2002017 hypothetical protein YP_005727694.1 2101146 D 591020 CDS YP_005727695.1 384543632 12318804 2102130..2103773 1 NC_017328.1 Invasion plasmid antigen 2103773 12318804 SFxv_2256 Shigella flexneri 2002017 Invasion plasmid antigen YP_005727695.1 2102130 D 591020 CDS YP_005727696.1 384543633 12318805 complement(2103953..2104330) 1 NC_017328.1 putative FOG: Transposase 2104330 12318805 SFxv_2257 Shigella flexneri 2002017 putative FOG: Transposase YP_005727696.1 2103953 R 591020 CDS YP_005727697.1 384543634 12318806 complement(2104473..2105291) 1 NC_017328.1 putative IS1 encoded protein 2105291 12318806 SFxv_2258 Shigella flexneri 2002017 putative IS1 encoded protein YP_005727697.1 2104473 R 591020 CDS YP_005727698.1 384543635 12318807 2105582..2106085 1 NC_017328.1 IS1 ORF2 2106085 12318807 SFxv_2259 Shigella flexneri 2002017 IS1 ORF2 YP_005727698.1 2105582 D 591020 CDS YP_005727699.1 384543636 12318808 complement(2106178..2106660) 1 NC_017328.1 hypothetical protein 2106660 12318808 SFxv_2260 Shigella flexneri 2002017 hypothetical protein YP_005727699.1 2106178 R 591020 CDS YP_005727700.1 384543637 12318809 complement(2106728..2108677) 1 NC_017328.1 putative tail protein 2108677 12318809 SFxv_2261 Shigella flexneri 2002017 putative tail protein YP_005727700.1 2106728 R 591020 CDS YP_005727701.1 384543638 12318810 complement(2108762..2109097) 1 NC_017328.1 hypothetical protein 2109097 12318810 SFxv_2262 Shigella flexneri 2002017 hypothetical protein YP_005727701.1 2108762 R 591020 CDS YP_005727702.1 384543639 12318811 complement(2109097..2109453) 1 NC_017328.1 hypothetical protein 2109453 12318811 SFxv_2263 Shigella flexneri 2002017 hypothetical protein YP_005727702.1 2109097 R 591020 CDS YP_005727703.1 384543640 12318812 complement(2109453..2110949) 1 NC_017328.1 putative sheath protein 2110949 12318812 SFxv_2264 Shigella flexneri 2002017 putative sheath protein YP_005727703.1 2109453 R 591020 CDS YP_005727704.1 384543641 12318813 complement(2111117..2111473) 1 NC_017328.1 hypothetical protein 2111473 12318813 SFxv_2265 Shigella flexneri 2002017 hypothetical protein YP_005727704.1 2111117 R 591020 CDS YP_005727705.1 384543642 12318814 complement(2111501..2112319) 1 NC_017328.1 IS600 ORF2 2112319 12318814 SFxv_2266 Shigella flexneri 2002017 IS600 ORF2 YP_005727705.1 2111501 R 591020 CDS YP_005727706.1 384543643 12318815 complement(2112714..2113535) 1 NC_017328.1 ISSfl4 ORF3 2113535 12318815 SFxv_2267 Shigella flexneri 2002017 ISSfl4 ORF3 YP_005727706.1 2112714 R 591020 CDS YP_005727707.1 384543644 12318816 complement(2113532..2113882) 1 NC_017328.1 ISSfl4 ORF2 2113882 12318816 SFxv_2268 Shigella flexneri 2002017 ISSfl4 ORF2 YP_005727707.1 2113532 R 591020 CDS YP_005727708.1 384543645 12318817 complement(2113879..2114553) 1 NC_017328.1 ISSfl3 orfA 2114553 12318817 SFxv_2269 Shigella flexneri 2002017 ISSfl3 orfA YP_005727708.1 2113879 R 591020 CDS YP_005727709.1 384543646 12318818 complement(2114652..2114867) 1 NC_017328.1 Lysis protein S 2114867 12318818 SFxv_2270 Shigella flexneri 2002017 Lysis protein S YP_005727709.1 2114652 R 591020 CDS YP_005727710.1 384543647 12318822 complement(2115668..2116351) 1 NC_017328.1 putative Q antiterminator of prophage 2116351 12318822 SFxv_2271 Shigella flexneri 2002017 putative Q antiterminator of prophage YP_005727710.1 2115668 R 591020 CDS YP_005727711.1 384543648 12318824 complement(2116715..2117773) 1 NC_017328.1 hypothetical protein 2117773 12318824 SFxv_2274 Shigella flexneri 2002017 hypothetical protein YP_005727711.1 2116715 R 591020 CDS YP_005727712.1 384543649 12318825 complement(2117775..2118053) 1 NC_017328.1 hypothetical protein 2118053 12318825 SFxv_2275 Shigella flexneri 2002017 hypothetical protein YP_005727712.1 2117775 R 591020 CDS YP_005727713.1 384543650 12318826 complement(2118221..2118433) 1 NC_017328.1 putative cell killing protein encoded within cryptic prophage CP-933P 2118433 12318826 SFxv_2276 Shigella flexneri 2002017 putative cell killing protein encoded within cryptic prophage CP-933P YP_005727713.1 2118221 R 591020 CDS YP_005727714.1 384543651 12318827 complement(2118636..2118854) 1 NC_017328.1 hypothetical protein 2118854 12318827 SFxv_2277 Shigella flexneri 2002017 hypothetical protein YP_005727714.1 2118636 R 591020 CDS YP_005727715.1 384543652 12318828 complement(2119028..2119450) 1 NC_017328.1 hypothetical protein 2119450 12318828 SFxv_2278 Shigella flexneri 2002017 hypothetical protein YP_005727715.1 2119028 R 591020 CDS YP_005727716.1 384543653 12318829 2119489..2119611 1 NC_017328.1 hypothetical protein 2119611 12318829 SFxv_2279 Shigella flexneri 2002017 hypothetical protein YP_005727716.1 2119489 D 591020 CDS YP_005727717.1 384543654 12318830 2119611..2120636 1 NC_017328.1 putative phage integrase 2120636 12318830 SFxv_2280 Shigella flexneri 2002017 putative phage integrase YP_005727717.1 2119611 D 591020 CDS YP_005727718.1 384543655 12318832 2120833..2121669 1 NC_017328.1 putative YeeI protein 2121669 12318832 SFxv_2281 Shigella flexneri 2002017 putative YeeI protein YP_005727718.1 2120833 D 591020 CDS YP_005727719.1 384543656 12318834 2122520..2123269 1 NC_017328.1 putative Integrase 2123269 12318834 SFxv_2282 Shigella flexneri 2002017 putative Integrase YP_005727719.1 2122520 D 591020 CDS YP_005727720.1 384543657 12318835 complement(2123376..2124215) 1 NC_017328.1 IS911 orfA 2124215 12318835 SFxv_2284 Shigella flexneri 2002017 IS911 orfA YP_005727720.1 2123376 R 591020 CDS YP_005727721.1 384543658 12318837 2126147..2127601 1 NC_017328.1 AMP nucleosidase 2127601 amn 12318837 amn Shigella flexneri 2002017 AMP nucleosidase YP_005727721.1 2126147 D 591020 CDS YP_005727722.1 384543659 12318838 2127944..2128660 1 NC_017328.1 protein yeeN 2128660 yeeN 12318838 yeeN Shigella flexneri 2002017 protein yeeN YP_005727722.1 2127944 D 591020 CDS YP_005727723.1 384543660 12318842 complement(2131037..2131987) 1 NC_017328.1 Transcriptional regulator cbl 2131987 cbl 12318842 cbl Shigella flexneri 2002017 Transcriptional regulator cbl YP_005727723.1 2131037 R 591020 CDS YP_005727724.1 384543661 12318843 complement(2132089..2133006) 1 NC_017328.1 Nitrogen assimilation control protein 2133006 nac 12318843 nac Shigella flexneri 2002017 Nitrogen assimilation control protein YP_005727724.1 2132089 R 591020 CDS YP_005727725.1 384543662 12318845 complement(2133465..2134400) 1 NC_017328.1 putative exported protein ErfK 2134400 erfK 12318845 erfK Shigella flexneri 2002017 putative exported protein ErfK YP_005727725.1 2133465 R 591020 CDS YP_005727726.1 384543663 12318846 complement(2134462..2135541) 1 NC_017328.1 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 2135541 cobT 12318846 cobT Shigella flexneri 2002017 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase YP_005727726.1 2134462 R 591020 CDS YP_005727727.1 384543664 12318847 complement(2135553..2136296) 1 NC_017328.1 cobalamin synthase 2136296 cobS 12318847 cobS Shigella flexneri 2002017 cobalamin synthase YP_005727727.1 2135553 R 591020 CDS YP_005727728.1 384543665 12318848 complement(2136293..2136802) 1 NC_017328.1 Cobinamide kinase-cobinamide phosphate guanylyltransferase 2136802 cobU 12318848 cobU Shigella flexneri 2002017 Cobinamide kinase-cobinamide phosphate guanylyltransferase YP_005727728.1 2136293 R 591020 CDS YP_005727729.1 384543666 12318849 complement(2136814..2137632) 1 NC_017328.1 IS600 ORF2 2137632 12318849 SFxv_2296 Shigella flexneri 2002017 IS600 ORF2 YP_005727729.1 2136814 R 591020 CDS YP_005727730.1 384543667 12318850 complement(2138032..2138184) 1 NC_017328.1 ISSfl4 ORF4 2138184 12318850 SFxv_2297 Shigella flexneri 2002017 ISSfl4 ORF4 YP_005727730.1 2138032 R 591020 CDS YP_005727731.1 384543668 12318851 complement(2138335..2139240) 1 NC_017328.1 IS2 ORF2 2139240 12318851 SFxv_2300 Shigella flexneri 2002017 IS2 ORF2 YP_005727731.1 2138335 R 591020 CDS YP_005727732.1 384543669 12318852 2138764..2139195 1 NC_017328.1 Insertion element IS2 protein 2139195 12318852 SFxv_2298 Shigella flexneri 2002017 Insertion element IS2 protein YP_005727732.1 2138764 D 591020 CDS YP_005727733.1 384543670 12318853 complement(2139198..2139563) 1 NC_017328.1 IS2 ORF1 2139563 12318853 SFxv_2301 Shigella flexneri 2002017 IS2 ORF1 YP_005727733.1 2139198 R 591020 CDS YP_005727734.1 384543671 12318854 complement(2139605..2140558) 1 NC_017328.1 ISSfl4 ORF3 2140558 12318854 SFxv_2302 Shigella flexneri 2002017 ISSfl4 ORF3 YP_005727734.1 2139605 R 591020 CDS YP_005727735.1 384543672 12318855 complement(2140555..2140905) 1 NC_017328.1 ISSfl4 ORF2 2140905 12318855 SFxv_2303 Shigella flexneri 2002017 ISSfl4 ORF2 YP_005727735.1 2140555 R 591020 CDS YP_005727736.1 384543673 12318856 complement(2140902..2141576) 1 NC_017328.1 ISSfl3 orfA 2141576 12318856 SFxv_2304 Shigella flexneri 2002017 ISSfl3 orfA YP_005727736.1 2140902 R 591020 CDS YP_005727737.1 384543674 12318857 complement(2141655..2142494) 1 NC_017328.1 Phage integrase family protein 2142494 12318857 SFxv_2305 Shigella flexneri 2002017 Phage integrase family protein YP_005727737.1 2141655 R 591020 CDS YP_005727738.1 384543675 12318858 2142676..2144100 1 NC_017328.1 deoxyribophosphodiesterase 2144100 sbcB 12318858 sbcB Shigella flexneri 2002017 deoxyribophosphodiesterase YP_005727738.1 2142676 D 591020 CDS YP_005727739.1 384543676 12318859 complement(2144143..2144370) 1 NC_017328.1 SirA family protein 2144370 yeeD 12318859 yeeD Shigella flexneri 2002017 SirA family protein YP_005727739.1 2144143 R 591020 CDS YP_005727740.1 384543677 12318860 complement(2144384..2145442) 1 NC_017328.1 putative transport system permease 2145442 yeeE 12318860 yeeE Shigella flexneri 2002017 putative transport system permease YP_005727740.1 2144384 R 591020 CDS YP_005727741.1 384543678 12318861 complement(2145621..2146979) 1 NC_017328.1 putative amino acid/amine transport protein 2146979 yeeF 12318861 yeeF Shigella flexneri 2002017 putative amino acid/amine transport protein YP_005727741.1 2145621 R 591020 CDS YP_005727742.1 384543679 12318862 complement(2147192..2148175) 1 NC_017328.1 putative LYSR-type transcriptional regulator 2148175 yeeY 12318862 yeeY Shigella flexneri 2002017 putative LYSR-type transcriptional regulator YP_005727742.1 2147192 R 591020 CDS YP_005727743.1 384543680 12318863 complement(2148221..2149045) 1 NC_017328.1 NAD dependent epimerase/dehydratase family protein 2149045 yeeZ 12318863 yeeZ Shigella flexneri 2002017 NAD dependent epimerase/dehydratase family protein YP_005727743.1 2148221 R 591020 CDS YP_005727744.1 384543681 12318864 complement(2149128..2149382) 1 NC_017328.1 Toxin yoeB 2149382 yoeB 12318864 yoeB Shigella flexneri 2002017 Toxin yoeB YP_005727744.1 2149128 R 591020 CDS YP_005727745.1 384543682 12318865 complement(2149404..2149907) 1 NC_017328.1 IS1 ORF2 2149907 12318865 SFxv_2313 Shigella flexneri 2002017 IS1 ORF2 YP_005727745.1 2149404 R 591020 CDS YP_005727746.1 384543683 12318866 2150021..2150191 1 NC_017328.1 IS600 ORF2 2150191 12318866 SFxv_2314 Shigella flexneri 2002017 IS600 ORF2 YP_005727746.1 2150021 D 591020 CDS YP_005727747.1 384543684 12318867 complement(2150135..2150407) 1 NC_017328.1 antitoxin yefM 2150407 yefM 12318867 yefM Shigella flexneri 2002017 antitoxin yefM YP_005727747.1 2150135 R 591020 CDS YP_005727748.1 384543685 12318868 2150877..2151776 1 NC_017328.1 ATP phosphoribosyltransferase 2151776 hisG 12318868 hisG Shigella flexneri 2002017 ATP phosphoribosyltransferase YP_005727748.1 2150877 D 591020 CDS YP_005727749.1 384543686 12318869 2151782..2153086 1 NC_017328.1 histidinol dehydrogenase 2153086 hisD 12318869 hisD Shigella flexneri 2002017 histidinol dehydrogenase YP_005727749.1 2151782 D 591020 CDS YP_005727750.1 384543687 12318870 2153083..2154153 1 NC_017328.1 histidinol-phosphate aminotransferase 2154153 hisC 12318870 hisC Shigella flexneri 2002017 histidinol-phosphate aminotransferase YP_005727750.1 2153083 D 591020 CDS YP_005727751.1 384543688 12318871 2154153..2155220 1 NC_017328.1 imidazole glycerol-phosphate dehydratase/histidinol phosphatase 2155220 hisB 12318871 hisB Shigella flexneri 2002017 imidazole glycerol-phosphate dehydratase/histidinol phosphatase YP_005727751.1 2154153 D 591020 CDS YP_005727752.1 384543689 12318872 2155220..2155810 1 NC_017328.1 imidazole glycerol phosphate synthase subunit hisH 2155810 hisH 12318872 hisH Shigella flexneri 2002017 imidazole glycerol phosphate synthase subunit hisH YP_005727752.1 2155220 D 591020 CDS YP_005727753.1 384543690 12318873 2155810..2156547 1 NC_017328.1 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 2156547 hisA 12318873 hisA Shigella flexneri 2002017 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase YP_005727753.1 2155810 D 591020 CDS YP_005727754.1 384543691 12318874 2156529..2157305 1 NC_017328.1 imidazole glycerol phosphate synthase subunit HisF 2157305 hisF 12318874 hisF Shigella flexneri 2002017 imidazole glycerol phosphate synthase subunit HisF YP_005727754.1 2156529 D 591020 CDS YP_005727755.1 384543692 12318875 2157299..2157910 1 NC_017328.1 Phosphoribosyl-AMP cyclohydrolase/Phosphoribosyl-ATP pyrophosphatase 2157910 hisI 12318875 hisI Shigella flexneri 2002017 Phosphoribosyl-AMP cyclohydrolase/Phosphoribosyl-ATP pyrophosphatase YP_005727755.1 2157299 D 591020 CDS YP_005727756.1 384543693 12318876 complement(2158096..2159109) 1 NC_017328.1 Chain length determinant protein 2159109 12318876 SFxv_2324 Shigella flexneri 2002017 Chain length determinant protein YP_005727756.1 2158096 R 591020 CDS YP_005727757.1 384543694 12318878 complement(2160589..2161995) 1 NC_017328.1 6-phosphogluconate dehydrogenase 2161995 gnd 12318878 gnd Shigella flexneri 2002017 6-phosphogluconate dehydrogenase YP_005727757.1 2160589 R 591020 CDS YP_005727758.1 384543695 12318879 complement(2162104..2162463) 1 NC_017328.1 hypothetical protein 2162463 12318879 SFxv_2327 Shigella flexneri 2002017 hypothetical protein YP_005727758.1 2162104 R 591020 CDS YP_005727759.1 384543696 12318880 complement(2162460..2163011) 1 NC_017328.1 hypothetical protein 2163011 12318880 SFxv_2328 Shigella flexneri 2002017 hypothetical protein YP_005727759.1 2162460 R 591020 CDS YP_005727760.1 384543697 12318881 complement(2163112..2163711) 1 NC_017328.1 hypothetical protein 2163711 12318881 SFxv_2329 Shigella flexneri 2002017 hypothetical protein YP_005727760.1 2163112 R 591020 CDS YP_005727761.1 384543698 12318882 complement(2163882..2164373) 1 NC_017328.1 hypothetical protein 2164373 12318882 SFxv_2330 Shigella flexneri 2002017 hypothetical protein YP_005727761.1 2163882 R 591020 CDS YP_005727762.1 384543699 12318883 complement(2164431..2164820) 1 NC_017328.1 Protein rfbJ 2164820 12318883 SFxv_2331 Shigella flexneri 2002017 Protein rfbJ YP_005727762.1 2164431 R 591020 CDS YP_005727763.1 384543700 12318884 complement(2164883..2165257) 1 NC_017328.1 Bactoprenol-linked glucose translocase 2165257 12318884 SFxv_2332 Shigella flexneri 2002017 Bactoprenol-linked glucose translocase YP_005727763.1 2164883 R 591020 CDS YP_005727764.1 384543701 12318885 complement(2165261..2166409) 1 NC_017328.1 O-antigen polymerase 2166409 12318885 SFxv_2333 Shigella flexneri 2002017 O-antigen polymerase YP_005727764.1 2165261 R 591020 CDS YP_005727765.1 384543702 12318886 complement(2166429..2167334) 1 NC_017328.1 dTDP-rhamnosyl transferase rfbG 2167334 12318886 SFxv_2334 Shigella flexneri 2002017 dTDP-rhamnosyl transferase rfbG YP_005727765.1 2166429 R 591020 CDS YP_005727766.1 384543703 12318887 complement(2167327..2168217) 1 NC_017328.1 dTDP-rhamnosyl transferase rfbF 2168217 12318887 SFxv_2335 Shigella flexneri 2002017 dTDP-rhamnosyl transferase rfbF YP_005727766.1 2167327 R 591020 CDS YP_005727767.1 384543704 12318888 complement(2168247..2169503) 1 NC_017328.1 putative O-antigen transporter 2169503 12318888 SFxv_2336 Shigella flexneri 2002017 putative O-antigen transporter YP_005727767.1 2168247 R 591020 CDS YP_005727768.1 384543705 12318889 complement(2169519..2170064) 1 NC_017328.1 dTDP-4-dehydrorhamnose 3,5-epimerase 2170064 rfbC 12318889 rfbC Shigella flexneri 2002017 dTDP-4-dehydrorhamnose 3,5-epimerase YP_005727768.1 2169519 R 591020 CDS YP_005727769.1 384543706 12318890 complement(2170069..2170947) 1 NC_017328.1 Glucose-1-phosphate thymidylyltransferase 1 2170947 rfbA 12318890 rfbA Shigella flexneri 2002017 Glucose-1-phosphate thymidylyltransferase 1 YP_005727769.1 2170069 R 591020 CDS YP_005727770.1 384543707 12318891 complement(2171006..2171905) 1 NC_017328.1 dTDP-4-dehydrorhamnose reductase 2171905 rfbD 12318891 rfbD Shigella flexneri 2002017 dTDP-4-dehydrorhamnose reductase YP_005727770.1 2171006 R 591020 CDS YP_005727771.1 384543708 12318892 complement(2171905..2172990) 1 NC_017328.1 dTDP-glucose 4,6-dehydratase 2172990 rfbB 12318892 rfbB Shigella flexneri 2002017 dTDP-glucose 4,6-dehydratase YP_005727771.1 2171905 R 591020 CDS YP_005727772.1 384543709 12318893 complement(2173363..2174256) 1 NC_017328.1 UTP--glucose-1-phosphate uridylyltransferase 2174256 galF 12318893 galF Shigella flexneri 2002017 UTP--glucose-1-phosphate uridylyltransferase YP_005727772.1 2173363 R 591020 CDS YP_005727773.1 384543710 12318894 complement(2174431..2175825) 1 NC_017328.1 Colanic acid biosynthesis protein wcaM 2175825 wcaM 12318894 wcaM Shigella flexneri 2002017 Colanic acid biosynthesis protein wcaM YP_005727773.1 2174431 R 591020 CDS YP_005727774.1 384543711 12318895 complement(2175836..2177056) 1 NC_017328.1 putative colanic acid biosynthesis glycosyl transferase 2177056 wcaL 12318895 wcaL Shigella flexneri 2002017 putative colanic acid biosynthesis glycosyl transferase YP_005727774.1 2175836 R 591020 CDS YP_005727775.1 384543712 12318896 complement(2177053..2178333) 1 NC_017328.1 putative galactokinase 2178333 wcaK 12318896 wcaK Shigella flexneri 2002017 putative galactokinase YP_005727775.1 2177053 R 591020 CDS YP_005727776.1 384543713 12318897 complement(2178513..2179991) 1 NC_017328.1 putative Membrane protein involved in the export of O-antigen and teichoic acid 2179991 wzxC 12318897 wzxC Shigella flexneri 2002017 putative Membrane protein involved in the export of O-antigen and teichoic acid YP_005727776.1 2178513 R 591020 CDS YP_005727777.1 384543714 12318898 complement(2179993..2181387) 1 NC_017328.1 undecaprenyl-phosphate galactose phosphotransferase 2181387 wcaJ 12318898 wcaJ Shigella flexneri 2002017 undecaprenyl-phosphate galactose phosphotransferase YP_005727777.1 2179993 R 591020 CDS YP_005727778.1 384543715 12318899 complement(2181442..2182812) 1 NC_017328.1 phosphomannomutase 2182812 cpsG 12318899 cpsG Shigella flexneri 2002017 phosphomannomutase YP_005727778.1 2181442 R 591020 CDS YP_005727779.1 384543716 12318900 2182838..2182996 1 NC_017328.1 hypothetical protein 2182996 12318900 SFxv_2348 Shigella flexneri 2002017 hypothetical protein YP_005727779.1 2182838 D 591020 CDS YP_005727780.1 384543717 12318901 complement(2183005..2184441) 1 NC_017328.1 Mannose-1-phosphate guanyltransferase 2184441 cpsB 12318901 cpsB Shigella flexneri 2002017 Mannose-1-phosphate guanyltransferase YP_005727780.1 2183005 R 591020 CDS YP_005727781.1 384543718 12318902 complement(2184444..2185667) 1 NC_017328.1 putative colanic biosynthesis glycosyl transferase 2185667 wcaI 12318902 wcaI Shigella flexneri 2002017 putative colanic biosynthesis glycosyl transferase YP_005727781.1 2184444 R 591020 CDS YP_005727782.1 384543719 12318903 complement(2185664..2186110) 1 NC_017328.1 GDP-mannose mannosyl hydrolase 2186110 gmm 12318903 gmm Shigella flexneri 2002017 GDP-mannose mannosyl hydrolase YP_005727782.1 2185664 R 591020 CDS YP_005727783.1 384543720 12318904 complement(2186143..2187111) 1 NC_017328.1 putative nucleotide di-P-sugar epimerase or dehydratase 2187111 fcl 12318904 fcl Shigella flexneri 2002017 putative nucleotide di-P-sugar epimerase or dehydratase YP_005727783.1 2186143 R 591020 CDS YP_005727784.1 384543721 12318905 complement(2187114..2188235) 1 NC_017328.1 GDP-mannose 4,6-dehydratase 2188235 gmd 12318905 gmd Shigella flexneri 2002017 GDP-mannose 4,6-dehydratase YP_005727784.1 2187114 R 591020 CDS YP_005727785.1 384543722 12318906 complement(2188261..2188809) 1 NC_017328.1 putative colanic acid biosynthesis acetyltransferase wcaF 2188809 wcaF 12318906 wcaF Shigella flexneri 2002017 putative colanic acid biosynthesis acetyltransferase wcaF YP_005727785.1 2188261 R 591020 CDS YP_005727786.1 384543723 12318907 complement(2188825..2189124) 1 NC_017328.1 putative IS1 encoded protein 2189124 wcaE 12318907 wcaE Shigella flexneri 2002017 putative IS1 encoded protein YP_005727786.1 2188825 R 591020 CDS YP_005727787.1 384543724 12318908 2189199..2189702 1 NC_017328.1 IS1 ORF2 2189702 12318908 SFxv_2356 Shigella flexneri 2002017 IS1 ORF2 YP_005727787.1 2189199 D 591020 CDS YP_005727788.1 384543725 12318909 complement(2189713..2190537) 1 NC_017328.1 putative colanic acid polymerase 2190537 wcaD 12318909 wcaD Shigella flexneri 2002017 putative colanic acid polymerase YP_005727788.1 2189713 R 591020 CDS YP_005727789.1 384543726 12318910 complement(2190512..2191729) 1 NC_017328.1 putative glycosyl transferase 2191729 wcaC 12318910 wcaC Shigella flexneri 2002017 putative glycosyl transferase YP_005727789.1 2190512 R 591020 CDS YP_005727790.1 384543727 12318911 complement(2191726..2192214) 1 NC_017328.1 putative colanic acid biosynthesis acetyltransferase wcaB 2192214 wcaB 12318911 wcaB Shigella flexneri 2002017 putative colanic acid biosynthesis acetyltransferase wcaB YP_005727790.1 2191726 R 591020 CDS YP_005727791.1 384543728 12318913 complement(2193149..2195311) 1 NC_017328.1 Protein-tyrosine kinase 2195311 wzc 12318913 wzc Shigella flexneri 2002017 Protein-tyrosine kinase YP_005727791.1 2193149 R 591020 CDS YP_005727792.1 384543729 12318914 complement(2195314..2195757) 1 NC_017328.1 protein-tyrosine-phosphatase 2195757 wzb 12318914 wzb Shigella flexneri 2002017 protein-tyrosine-phosphatase YP_005727792.1 2195314 R 591020 CDS YP_005727793.1 384543730 12318915 complement(2195763..2196881) 1 NC_017328.1 putative polysaccharide export protein 2196881 wza 12318915 wza Shigella flexneri 2002017 putative polysaccharide export protein YP_005727793.1 2195763 R 591020 CDS YP_005727794.1 384543731 12318916 2197495..2199144 1 NC_017328.1 putative transport protein 2199144 yegH 12318916 yegH Shigella flexneri 2002017 putative transport protein YP_005727794.1 2197495 D 591020 CDS YP_005727795.1 384543732 12318917 complement(2199596..2201449) 1 NC_017328.1 Suppressor of ompF assembly mutants 2201449 asmA 12318917 asmA Shigella flexneri 2002017 Suppressor of ompF assembly mutants YP_005727795.1 2199596 R 591020 CDS YP_005727796.1 384543733 12318918 complement(2201471..2202052) 1 NC_017328.1 Deoxycytidine triphosphate deaminase 2202052 dcd 12318918 dcd Shigella flexneri 2002017 Deoxycytidine triphosphate deaminase YP_005727796.1 2201471 R 591020 CDS YP_005727797.1 384543734 12318919 complement(2202144..2202839) 1 NC_017328.1 Uridine/cytidine kinase 2202839 udk 12318919 udk Shigella flexneri 2002017 Uridine/cytidine kinase YP_005727797.1 2202144 R 591020 CDS YP_005727798.1 384543735 12318920 2203259..2203393 1 NC_017328.1 putative sensor-type protein 2203393 yegE 12318920 yegE Shigella flexneri 2002017 putative sensor-type protein YP_005727798.1 2203259 D 591020 CDS YP_005727799.1 384543736 12318921 2203608..2204285 1 NC_017328.1 hypothetical protein 2204285 mdtA 12318921 mdtA Shigella flexneri 2002017 hypothetical protein YP_005727799.1 2203608 D 591020 CDS YP_005727800.1 384543737 12318923 2207408..2210473 1 NC_017328.1 Multidrug resistance protein mdtC 2210473 mdtC 12318923 mdtC Shigella flexneri 2002017 Multidrug resistance protein mdtC YP_005727800.1 2207408 D 591020 CDS YP_005727801.1 384543738 12318924 2210474..2211889 1 NC_017328.1 putative multidrug resistance protein mdtD 2211889 mdtD 12318924 mdtD Shigella flexneri 2002017 putative multidrug resistance protein mdtD YP_005727801.1 2210474 D 591020 CDS YP_005727802.1 384543739 12318925 2213286..2214008 1 NC_017328.1 Transcriptional response regulatory protein 2214008 baeR 12318925 baeR Shigella flexneri 2002017 Transcriptional response regulatory protein YP_005727802.1 2213286 D 591020 CDS YP_005727803.1 384543740 12318926 2214160..2214531 1 NC_017328.1 hypothetical protein 2214531 12318926 SFxv_2375 Shigella flexneri 2002017 hypothetical protein YP_005727803.1 2214160 D 591020 CDS YP_005727804.1 384543741 12318927 2214537..2216039 1 NC_017328.1 putative protease yegQ 2216039 yegQ 12318927 yegQ Shigella flexneri 2002017 putative protease yegQ YP_005727804.1 2214537 D 591020 CDS YP_005727805.1 384543742 12318928 complement(2216202..2216393) 1 NC_017328.1 hypothetical protein 2216393 12318928 SFxv_2376a Shigella flexneri 2002017 hypothetical protein YP_005727805.1 2216202 R 591020 CDS YP_005727806.1 384543743 12318929 complement(2216381..2216758) 1 NC_017328.1 hypothetical protein 2216758 12318929 SFxv_2377 Shigella flexneri 2002017 hypothetical protein YP_005727806.1 2216381 R 591020 CDS YP_005727807.1 384543744 12318930 2217104..2218003 1 NC_017328.1 Lipid kinase yegS 2218003 yegS 12318930 yegS Shigella flexneri 2002017 Lipid kinase yegS YP_005727807.1 2217104 D 591020 CDS YP_005727808.1 384543745 12318931 complement(2218085..2218864) 1 NC_017328.1 Galactitol utilization operon repressor 2218864 12318931 SFxv_2379 Shigella flexneri 2002017 Galactitol utilization operon repressor YP_005727808.1 2218085 R 591020 CDS YP_005727809.1 384543746 12318932 complement(2218964..2220004) 1 NC_017328.1 Galactitol-1-phosphate dehydrogenase 2220004 gatD 12318932 gatD Shigella flexneri 2002017 Galactitol-1-phosphate dehydrogenase YP_005727809.1 2218964 R 591020 CDS YP_005727810.1 384543747 12318933 complement(2220037..2220540) 1 NC_017328.1 IS1 ORF2 2220540 12318933 SFxv_2381 Shigella flexneri 2002017 IS1 ORF2 YP_005727810.1 2220037 R 591020 CDS YP_005727811.1 384543748 12318934 2220654..2220800 1 NC_017328.1 IS600 ORF2 2220800 12318934 SFxv_2382 Shigella flexneri 2002017 IS600 ORF2 YP_005727811.1 2220654 D 591020 CDS YP_005727812.1 384543749 12318935 complement(2220829..2222184) 1 NC_017328.1 PTS system galactitol-specific enzyme IIC 2222184 gatC 12318935 gatC Shigella flexneri 2002017 PTS system galactitol-specific enzyme IIC YP_005727812.1 2220829 R 591020 CDS YP_005727813.1 384543750 12318936 complement(2222188..2222472) 1 NC_017328.1 Galactitol-specific phosphotransferase enzyme IIB component 2222472 gatB 12318936 gatB Shigella flexneri 2002017 Galactitol-specific phosphotransferase enzyme IIB component YP_005727813.1 2222188 R 591020 CDS YP_005727814.1 384543751 12318937 complement(2222503..2222955) 1 NC_017328.1 Galactitol-specific enzyme IIA of phosphotransferase system 2222955 gatA 12318937 gatA Shigella flexneri 2002017 Galactitol-specific enzyme IIA of phosphotransferase system YP_005727814.1 2222503 R 591020 CDS YP_005727815.1 384543752 12318939 complement(2224256..2225116) 1 NC_017328.1 Tagatose-bisphosphate aldolase 1 2225116 gatY 12318939 gatY Shigella flexneri 2002017 Tagatose-bisphosphate aldolase 1 YP_005727815.1 2224256 R 591020 CDS YP_005727816.1 384543753 12318940 complement(2225418..2226470) 1 NC_017328.1 fructose-bisphosphate aldolase class 1 2226470 fbaB 12318940 fbaB Shigella flexneri 2002017 fructose-bisphosphate aldolase class 1 YP_005727816.1 2225418 R 591020 CDS YP_005727817.1 384543754 12318941 2226707..2227513 1 NC_017328.1 ADP-ribosylglycohydrolase family protein 2227513 yegU 12318941 yegU Shigella flexneri 2002017 ADP-ribosylglycohydrolase family protein YP_005727817.1 2226707 D 591020 CDS YP_005727818.1 384543755 12318942 2227510..2228475 1 NC_017328.1 putative kinase 2228475 yegV 12318942 yegV Shigella flexneri 2002017 putative kinase YP_005727818.1 2227510 D 591020 CDS YP_005727819.1 384543756 12318943 complement(2228449..2229195) 1 NC_017328.1 GntR family transcriptional regulator 2229195 yegW 12318943 yegW Shigella flexneri 2002017 GntR family transcriptional regulator YP_005727819.1 2228449 R 591020 CDS YP_005727820.1 384543757 12318944 complement(2229243..2230073) 1 NC_017328.1 putative Lyzozyme M1 (1,4-beta-N-acetylmuramidase) 2230073 yegX 12318944 yegX Shigella flexneri 2002017 putative Lyzozyme M1 (1,4-beta-N-acetylmuramidase) YP_005727820.1 2229243 R 591020 CDS YP_005727821.1 384543758 12318945 complement(2230129..2230929) 1 NC_017328.1 Phosphomethylpyrimidine kinase 2230929 thiD 12318945 thiD Shigella flexneri 2002017 Phosphomethylpyrimidine kinase YP_005727821.1 2230129 R 591020 CDS YP_005727822.1 384543759 12318946 complement(2230926..2231714) 1 NC_017328.1 hydroxyethylthiazole kinase 2231714 thiM 12318946 thiM Shigella flexneri 2002017 hydroxyethylthiazole kinase YP_005727822.1 2230926 R 591020 CDS YP_005727823.1 384543760 12318947 complement(2231937..2232209) 1 NC_017328.1 hypothetical protein 2232209 12318947 SFxv_2395 Shigella flexneri 2002017 hypothetical protein YP_005727823.1 2231937 R 591020 CDS YP_005727824.1 384543761 12318949 complement(2234018..2234833) 1 NC_017328.1 putative type-1 fimbrial protein 2234833 yehA 12318949 yehA Shigella flexneri 2002017 putative type-1 fimbrial protein YP_005727824.1 2234018 R 591020 CDS YP_005727825.1 384543762 12318950 complement(2234849..2237311) 1 NC_017328.1 putative outer membrane protein 2237311 yehB 12318950 yehB Shigella flexneri 2002017 putative outer membrane protein YP_005727825.1 2234849 R 591020 CDS YP_005727826.1 384543763 12318951 complement(2237327..2238001) 1 NC_017328.1 putative fimbrial chaperone yehC precursor 2238001 yehC 12318951 yehC Shigella flexneri 2002017 putative fimbrial chaperone yehC precursor YP_005727826.1 2237327 R 591020 CDS YP_005727827.1 384543764 12318952 complement(2238082..2238606) 1 NC_017328.1 putative fimbrial-like protein 2238606 yehD 12318952 yehD Shigella flexneri 2002017 putative fimbrial-like protein YP_005727827.1 2238082 R 591020 CDS YP_005727828.1 384543765 12318953 complement(2238882..2239385) 1 NC_017328.1 IS1 ORF2 2239385 12318953 SFxv_2402 Shigella flexneri 2002017 IS1 ORF2 YP_005727828.1 2238882 R 591020 CDS YP_005727829.1 384543766 12318954 2239499..2239660 1 NC_017328.1 IS600 ORF2 2239660 12318954 SFxv_2403 Shigella flexneri 2002017 IS600 ORF2 YP_005727829.1 2239499 D 591020 CDS YP_005727830.1 384543767 12318955 complement(2239676..2239957) 1 NC_017328.1 hypothetical protein 2239957 12318955 SFxv_2404 Shigella flexneri 2002017 hypothetical protein YP_005727830.1 2239676 R 591020 CDS YP_005727831.1 384543768 12318956 complement(2240219..2241328) 1 NC_017328.1 putative ATPase 2241328 mrp 12318956 mrp Shigella flexneri 2002017 putative ATPase YP_005727831.1 2240219 R 591020 CDS YP_005727832.1 384543769 12318957 2241460..2243493 1 NC_017328.1 methionyl-tRNA synthetase 2243493 metG 12318957 metG Shigella flexneri 2002017 methionyl-tRNA synthetase YP_005727832.1 2241460 D 591020 CDS YP_005727833.1 384543770 12318958 2244227..2245045 1 NC_017328.1 IS600 ORF2 2245045 12318958 SFxv_2408 Shigella flexneri 2002017 IS600 ORF2 YP_005727833.1 2244227 D 591020 CDS YP_005727834.1 384543771 12318959 2245057..2245674 1 NC_017328.1 hypothetical protein 2245674 12318959 SFxv_2409 Shigella flexneri 2002017 hypothetical protein YP_005727834.1 2245057 D 591020 CDS YP_005727835.1 384543772 12318960 2245897..2246400 1 NC_017328.1 IS1 transposase 2246400 12318960 SFxv_2410 Shigella flexneri 2002017 IS1 transposase YP_005727835.1 2245897 D 591020 CDS YP_005727836.1 384543773 12318961 2248121..2249470 1 NC_017328.1 putative molybdate metabolism regulator 2249470 12318961 SFxv_2411 Shigella flexneri 2002017 putative molybdate metabolism regulator YP_005727836.1 2248121 D 591020 CDS YP_005727837.1 384543774 12318962 2249480..2253127 1 NC_017328.1 hypothetical protein 2253127 12318962 SFxv_2412 Shigella flexneri 2002017 hypothetical protein YP_005727837.1 2249480 D 591020 CDS YP_005727838.1 384543775 12318963 2253188..2253595 1 NC_017328.1 hypothetical protein 2253595 yehK 12318963 yehK Shigella flexneri 2002017 hypothetical protein YP_005727838.1 2253188 D 591020 CDS YP_005727839.1 384543776 12318964 2254071..2255225 1 NC_017328.1 AAA ATPase 2255225 yehL 12318964 yehL Shigella flexneri 2002017 AAA ATPase YP_005727839.1 2254071 D 591020 CDS YP_005727840.1 384543777 12318965 2255236..2257515 1 NC_017328.1 hypothetical protein 2257515 12318965 SFxv_2415 Shigella flexneri 2002017 hypothetical protein YP_005727840.1 2255236 D 591020 CDS YP_005727841.1 384543778 12318966 2257508..2258644 1 NC_017328.1 hypothetical protein 2258644 12318966 SFxv_2416 Shigella flexneri 2002017 hypothetical protein YP_005727841.1 2257508 D 591020 CDS YP_005727842.1 384543779 12318967 2258641..2260644 1 NC_017328.1 hypothetical protein 2260644 12318967 SFxv_2417 Shigella flexneri 2002017 hypothetical protein YP_005727842.1 2258641 D 591020 CDS YP_005727843.1 384543780 12318968 complement(2260757..2261260) 1 NC_017328.1 IS1 orfB 2261260 12318968 SFxv_2418 Shigella flexneri 2002017 IS1 orfB YP_005727843.1 2260757 R 591020 CDS YP_005727844.1 384543781 12318969 2261374..2261523 1 NC_017328.1 putative integrase encoded by prophage CP-933K 2261523 12318969 SFxv_2419 Shigella flexneri 2002017 putative integrase encoded by prophage CP-933K YP_005727844.1 2261374 D 591020 CDS YP_005727845.1 384543782 12318970 2261533..2262006 1 NC_017328.1 lipoprotein 2262006 12318970 SFxv_2420 Shigella flexneri 2002017 lipoprotein YP_005727845.1 2261533 D 591020 CDS YP_005727846.1 384543783 12318972 2262844..2263017 1 NC_017328.1 IS600 ORF2 2263017 12318972 SFxv_2423 Shigella flexneri 2002017 IS600 ORF2 YP_005727846.1 2262844 D 591020 CDS YP_005727847.1 384543784 12318973 complement(2263340..2264074) 1 NC_017328.1 putative response regulatory protein yehT 2264074 yehT 12318973 yehT Shigella flexneri 2002017 putative response regulatory protein yehT YP_005727847.1 2263340 R 591020 CDS YP_005727848.1 384543785 12318974 complement(2264056..2265741) 1 NC_017328.1 putative regulator of cell autolysis 2265741 yehU 12318974 yehU Shigella flexneri 2002017 putative regulator of cell autolysis YP_005727848.1 2264056 R 591020 CDS YP_005727849.1 384543786 12318975 2266284..2267468 1 NC_017328.1 IS4 ORF 2267468 12318975 SFxv_2427 Shigella flexneri 2002017 IS4 ORF YP_005727849.1 2266284 D 591020 CDS YP_005727850.1 384543787 12318976 2267693..2267941 1 NC_017328.1 DNA-damage-inducible protein 2267941 12318976 SFxv_2428 Shigella flexneri 2002017 DNA-damage-inducible protein YP_005727850.1 2267693 D 591020 CDS YP_005727851.1 384543788 12318977 complement(2268057..2268326) 1 NC_017328.1 putative bacteriophage protein 2268326 12318977 SFxv_2429 Shigella flexneri 2002017 putative bacteriophage protein YP_005727851.1 2268057 R 591020 CDS YP_005727852.1 384543789 12318978 2268383..2269051 1 NC_017328.1 hypothetical protein 2269051 12318978 SFxv_2430 Shigella flexneri 2002017 hypothetical protein YP_005727852.1 2268383 D 591020 CDS YP_005727853.1 384543790 12318979 2269367..2271010 1 NC_017328.1 Invasion plasmid antigen 2271010 12318979 SFxv_2431 Shigella flexneri 2002017 Invasion plasmid antigen YP_005727853.1 2269367 D 591020 CDS YP_005727854.1 384543791 12318980 complement(2271766..2273133) 1 NC_017328.1 putative tail fiber protein 2273133 12318980 SFxv_2432 Shigella flexneri 2002017 putative tail fiber protein YP_005727854.1 2271766 R 591020 CDS YP_005727855.1 384543792 12318981 complement(2273205..2273750) 1 NC_017328.1 putative tail fiber assembly protein 2273750 12318981 SFxv_2433 Shigella flexneri 2002017 putative tail fiber assembly protein YP_005727855.1 2273205 R 591020 CDS YP_005727856.1 384543793 12318982 complement(2273753..2274166) 1 NC_017328.1 hypothetical protein 2274166 12318982 SFxv_2434 Shigella flexneri 2002017 hypothetical protein YP_005727856.1 2273753 R 591020 CDS YP_005727857.1 384543794 12318983 2274402..2274905 1 NC_017328.1 IS1 orfB 2274905 12318983 SFxv_2435 Shigella flexneri 2002017 IS1 orfB YP_005727857.1 2274402 D 591020 CDS YP_005727858.1 384543795 12318984 2275351..2275578 1 NC_017328.1 HTH-type transcriptional regulator mlrA 2275578 12318984 SFxv_2436 Shigella flexneri 2002017 HTH-type transcriptional regulator mlrA YP_005727858.1 2275351 D 591020 CDS YP_005727859.1 384543796 12318985 2275604..2275930 1 NC_017328.1 IS629 ORF1 2275930 12318985 SFxv_2437 Shigella flexneri 2002017 IS629 ORF1 YP_005727859.1 2275604 D 591020 CDS YP_005727860.1 384543797 12318986 2276145..2276813 1 NC_017328.1 IS629 ORF2 2276813 12318986 SFxv_2439 Shigella flexneri 2002017 IS629 ORF2 YP_005727860.1 2276145 D 591020 CDS YP_005727861.1 384543798 12318987 complement(2276864..2277178) 1 NC_017328.1 hypothetical protein 2277178 12318987 SFxv_2442 Shigella flexneri 2002017 hypothetical protein YP_005727861.1 2276864 R 591020 CDS YP_005727862.1 384543799 12318988 2277153..2277311 1 NC_017328.1 putative transcriptional regulator 2277311 mlrA 12318988 mlrA Shigella flexneri 2002017 putative transcriptional regulator YP_005727862.1 2277153 D 591020 CDS YP_005727863.1 384543800 12318989 complement(2277459..2278190) 1 NC_017328.1 Binding-protein-dependent transport systems inner membrane component precursor 2278190 yehW 12318989 yehW Shigella flexneri 2002017 Binding-protein-dependent transport systems inner membrane component precursor YP_005727863.1 2277459 R 591020 CDS YP_005727864.1 384543801 12318990 complement(2278195..2279121) 1 NC_017328.1 ATPase 2279121 yehX 12318990 yehX Shigella flexneri 2002017 ATPase YP_005727864.1 2278195 R 591020 CDS YP_005727865.1 384543802 12318991 complement(2279114..2280271) 1 NC_017328.1 putative transport system permease 2280271 yehY 12318991 yehY Shigella flexneri 2002017 putative transport system permease YP_005727865.1 2279114 R 591020 CDS YP_005727866.1 384543803 12318992 complement(2280278..2281195) 1 NC_017328.1 putative transport system permease 2281195 osmF 12318992 osmF Shigella flexneri 2002017 putative transport system permease YP_005727866.1 2280278 R 591020 CDS YP_005727867.1 384543804 12318993 complement(2281447..2283744) 1 NC_017328.1 Beta-D-glucoside glucohydrolase 2283744 bglX 12318993 bglX Shigella flexneri 2002017 Beta-D-glucoside glucohydrolase YP_005727867.1 2281447 R 591020 CDS YP_005727868.1 384543805 12318994 2283745..2283903 1 NC_017328.1 hypothetical protein 2283903 12318994 SFxv_2449 Shigella flexneri 2002017 hypothetical protein YP_005727868.1 2283745 D 591020 CDS YP_005727869.1 384543806 12318995 2283940..2285655 1 NC_017328.1 D-lactate dehydrogenase, FAD protein 2285655 dld 12318995 dld Shigella flexneri 2002017 D-lactate dehydrogenase, FAD protein YP_005727869.1 2283940 D 591020 CDS YP_005727870.1 384543807 12318996 complement(2285693..2286634) 1 NC_017328.1 D-alanyl-D-alanine endopeptidase precursor 2286634 pbpG 12318996 pbpG Shigella flexneri 2002017 D-alanyl-D-alanine endopeptidase precursor YP_005727870.1 2285693 R 591020 CDS YP_005727871.1 384543808 12318997 complement(2286799..2287410) 1 NC_017328.1 hypothetical protein 2287410 12318997 SFxv_2453 Shigella flexneri 2002017 hypothetical protein YP_005727871.1 2286799 R 591020 CDS YP_005727872.1 384543809 12318998 2287520..2288134 1 NC_017328.1 hypothetical protein 2288134 12318998 SFxv_2454 Shigella flexneri 2002017 hypothetical protein YP_005727872.1 2287520 D 591020 CDS YP_005727873.1 384543810 12319000 complement(2289065..2290168) 1 NC_017328.1 Multidrug resistance outer membrane protein mdtQ precursor 2290168 12319000 SFxv_2457 Shigella flexneri 2002017 Multidrug resistance outer membrane protein mdtQ precursor YP_005727873.1 2289065 R 591020 CDS YP_005727874.1 384543811 12319001 complement(2291179..2292126) 1 NC_017328.1 tRNA-dihydrouridine synthase C 2292126 dusC 12319001 dusC Shigella flexneri 2002017 tRNA-dihydrouridine synthase C YP_005727874.1 2291179 R 591020 CDS YP_005727875.1 384543812 12319002 2292365..2292763 1 NC_017328.1 putative effector of murein hydrolase LrgA 2292763 yohJ 12319002 yohJ Shigella flexneri 2002017 putative effector of murein hydrolase LrgA YP_005727875.1 2292365 D 591020 CDS YP_005727876.1 384543813 12319003 2292760..2293455 1 NC_017328.1 Inner membrane protein yohK 2293455 yohK 12319003 yohK Shigella flexneri 2002017 Inner membrane protein yohK YP_005727876.1 2292760 D 591020 CDS YP_005727877.1 384543814 12319004 2293585..2294469 1 NC_017328.1 Cytidine deaminase 2294469 cdd 12319004 cdd Shigella flexneri 2002017 Cytidine deaminase YP_005727877.1 2293585 D 591020 CDS YP_005727878.1 384543815 12319005 2294619..2295338 1 NC_017328.1 Protein sanA 2295338 sanA 12319005 sanA Shigella flexneri 2002017 Protein sanA YP_005727878.1 2294619 D 591020 CDS YP_005727879.1 384543816 12319006 2295775..2297013 1 NC_017328.1 putative NADPH-dependent glutamate synthase beta chain-like oxidoreductase 2297013 yeiT 12319006 yeiT Shigella flexneri 2002017 putative NADPH-dependent glutamate synthase beta chain-like oxidoreductase YP_005727879.1 2295775 D 591020 CDS YP_005727880.1 384543817 12319008 complement(2298256..2299266) 1 NC_017328.1 Galactoside transport system permease protein mglC 2299266 mglC 12319008 mglC Shigella flexneri 2002017 Galactoside transport system permease protein mglC YP_005727880.1 2298256 R 591020 CDS YP_005727881.1 384543818 12319009 complement(2299282..2300802) 1 NC_017328.1 Galactose/methyl galactoside import ATP-binding protein mglA 2300802 mglA 12319009 mglA Shigella flexneri 2002017 Galactose/methyl galactoside import ATP-binding protein mglA YP_005727881.1 2299282 R 591020 CDS YP_005727882.1 384543819 12319010 complement(2300863..2301861) 1 NC_017328.1 D-galactose-binding periplasmic protein 2301861 mglB 12319010 mglB Shigella flexneri 2002017 D-galactose-binding periplasmic protein YP_005727882.1 2300863 R 591020 CDS YP_005727883.1 384543820 12319011 complement(2302141..2303181) 1 NC_017328.1 Mgl repressor, galactose operon inducer 2303181 galS 12319011 galS Shigella flexneri 2002017 Mgl repressor, galactose operon inducer YP_005727883.1 2302141 R 591020 CDS YP_005727884.1 384543821 12319012 complement(2303323..2304399) 1 NC_017328.1 hypothetical protein 2304399 yeiB 12319012 yeiB Shigella flexneri 2002017 hypothetical protein YP_005727884.1 2303323 R 591020 CDS YP_005727885.1 384543822 12319016 complement(2308494..2309963) 1 NC_017328.1 Lysine-specific permease 2309963 lysP 12319016 lysP Shigella flexneri 2002017 Lysine-specific permease YP_005727885.1 2308494 R 591020 CDS YP_005727886.1 384543823 12319017 complement(2310169..2311050) 1 NC_017328.1 putative LYSR-type transcriptional regulator 2311050 yeiE 12319017 yeiE Shigella flexneri 2002017 putative LYSR-type transcriptional regulator YP_005727886.1 2310169 R 591020 CDS YP_005727887.1 384543824 12319018 2311149..2312198 1 NC_017328.1 membrane protein yeiH 2312198 yeiH 12319018 yeiH Shigella flexneri 2002017 membrane protein yeiH YP_005727887.1 2311149 D 591020 CDS YP_005727888.1 384543825 12319019 2312272..2313129 1 NC_017328.1 putative endonuclease 4 2313129 nfo 12319019 nfo Shigella flexneri 2002017 putative endonuclease 4 YP_005727888.1 2312272 D 591020 CDS YP_005727889.1 384543826 12319020 2313207..2314220 1 NC_017328.1 putative Sugar kinase, ribokinase family 2314220 12319020 SFxv_2478 Shigella flexneri 2002017 putative Sugar kinase, ribokinase family YP_005727889.1 2313207 D 591020 CDS YP_005727890.1 384543827 12319021 complement(2314276..2315526) 1 NC_017328.1 putative transport system permease 2315526 nupX 12319021 nupX Shigella flexneri 2002017 putative transport system permease YP_005727890.1 2314276 R 591020 CDS YP_005727891.1 384543828 12319022 complement(2315626..2316567) 1 NC_017328.1 Pyrimidine-specific ribonucleoside hydrolase rihB 2316567 rihB 12319022 rihB Shigella flexneri 2002017 Pyrimidine-specific ribonucleoside hydrolase rihB YP_005727891.1 2315626 R 591020 CDS YP_005727892.1 384543829 12319023 2316737..2317315 1 NC_017328.1 Regulatory protein nsr 2317315 yeiL 12319023 yeiL Shigella flexneri 2002017 Regulatory protein nsr YP_005727892.1 2316737 D 591020 CDS YP_005727893.1 384543830 12319024 complement(2317463..2318713) 1 NC_017328.1 putative transport system permease 2318713 yeiM 12319024 yeiM Shigella flexneri 2002017 putative transport system permease YP_005727893.1 2317463 R 591020 CDS YP_005727894.1 384543831 12319025 complement(2318807..2319745) 1 NC_017328.1 hypothetical protein 2319745 12319025 SFxv_2483 Shigella flexneri 2002017 hypothetical protein YP_005727894.1 2318807 R 591020 CDS YP_005727895.1 384543832 12319026 complement(2319733..2320674) 1 NC_017328.1 putative Sugar kinase, ribokinase family 2320674 12319026 SFxv_2484 Shigella flexneri 2002017 putative Sugar kinase, ribokinase family YP_005727895.1 2319733 R 591020 CDS YP_005727896.1 384543833 12319027 complement(2321098..2322789) 1 NC_017328.1 PTS system fructose-specific transport protein 2322789 fruA 12319027 fruA Shigella flexneri 2002017 PTS system fructose-specific transport protein YP_005727896.1 2321098 R 591020 CDS YP_005727897.1 384543834 12319028 complement(2322806..2323744) 1 NC_017328.1 1-phosphofructokinase 2323744 fruK 12319028 fruK Shigella flexneri 2002017 1-phosphofructokinase YP_005727897.1 2322806 R 591020 CDS YP_005727898.1 384543835 12319029 complement(2323744..2324874) 1 NC_017328.1 putative Mannitol/fructose-specific phosphotransferase system, IIA domain protein 2324874 fruB 12319029 fruB Shigella flexneri 2002017 putative Mannitol/fructose-specific phosphotransferase system, IIA domain protein YP_005727898.1 2323744 R 591020 CDS YP_005727899.1 384543836 12319030 2325242..2326420 1 NC_017328.1 putative transport 2326420 setB 12319030 setB Shigella flexneri 2002017 putative transport YP_005727899.1 2325242 D 591020 CDS YP_005727900.1 384543837 12319031 complement(2326414..2326917) 1 NC_017328.1 IS1 orfB 2326917 12319031 SFxv_2489 Shigella flexneri 2002017 IS1 orfB YP_005727900.1 2326414 R 591020 CDS YP_005727901.1 384543838 12319032 2327031..2327189 1 NC_017328.1 IS600 ORF2 2327189 12319032 SFxv_2490 Shigella flexneri 2002017 IS600 ORF2 YP_005727901.1 2327031 D 591020 CDS YP_005727902.1 384543839 12319033 complement(2327196..2327450) 1 NC_017328.1 hypothetical protein 2327450 12319033 SFxv_2492 Shigella flexneri 2002017 hypothetical protein YP_005727902.1 2327196 R 591020 CDS YP_005727903.1 384543840 12319034 2327350..2328177 1 NC_017328.1 Elongation factor P family protein 2328177 yeiP 12319034 yeiP Shigella flexneri 2002017 Elongation factor P family protein YP_005727903.1 2327350 D 591020 CDS YP_005727904.1 384543841 12319035 2328391..2329866 1 NC_017328.1 putative oxidoreductase 2329866 yeiQ 12319035 yeiQ Shigella flexneri 2002017 putative oxidoreductase YP_005727904.1 2328391 D 591020 CDS YP_005727905.1 384543842 12319036 2329984..2330970 1 NC_017328.1 Cobalamin synthesis protein, P47K 2330970 yeiR 12319036 yeiR Shigella flexneri 2002017 Cobalamin synthesis protein, P47K YP_005727905.1 2329984 D 591020 CDS YP_005727906.1 384543843 12319037 2330973..2331722 1 NC_017328.1 hypothetical protein 2331722 12319037 SFxv_2495 Shigella flexneri 2002017 hypothetical protein YP_005727906.1 2330973 D 591020 CDS YP_005727907.1 384543844 12319038 2332134..2332700 1 NC_017328.1 Lipoprotein spr precursor 2332700 spr 12319038 spr Shigella flexneri 2002017 Lipoprotein spr precursor YP_005727907.1 2332134 D 591020 CDS YP_005727908.1 384543845 12319039 2332881..2334437 1 NC_017328.1 putative FOG: EAL domain protein 2334437 rtn 12319039 rtn Shigella flexneri 2002017 putative FOG: EAL domain protein YP_005727908.1 2332881 D 591020 CDS YP_005727909.1 384543846 12319040 2334513..2336333 1 NC_017328.1 hypothetical protein 2336333 12319040 SFxv_2499 Shigella flexneri 2002017 hypothetical protein YP_005727909.1 2334513 D 591020 CDS YP_005727910.1 384543847 12319041 2336334..2337428 1 NC_017328.1 Inner membrane ABC transporter permease protein yejB 2337428 yejB 12319041 yejB Shigella flexneri 2002017 Inner membrane ABC transporter permease protein yejB YP_005727910.1 2336334 D 591020 CDS YP_005727911.1 384543848 12319042 2337428..2338453 1 NC_017328.1 putative ABC-type putative transport system, permease component 2338453 yejE 12319042 yejE Shigella flexneri 2002017 putative ABC-type putative transport system, permease component YP_005727911.1 2337428 D 591020 CDS YP_005727912.1 384543849 12319043 2338455..2340044 1 NC_017328.1 ATPase 2340044 yejF 12319043 yejF Shigella flexneri 2002017 ATPase YP_005727912.1 2338455 D 591020 CDS YP_005727913.1 384543850 12319044 complement(2340048..2340392) 1 NC_017328.1 hypothetical protein 2340392 yejG 12319044 yejG Shigella flexneri 2002017 hypothetical protein YP_005727913.1 2340048 R 591020 CDS YP_005727914.1 384543851 12319045 complement(2340725..2341915) 1 NC_017328.1 Bicyclomycin resistance protein 2341915 bcr 12319045 bcr Shigella flexneri 2002017 Bicyclomycin resistance protein YP_005727914.1 2340725 R 591020 CDS YP_005727915.1 384543852 12319046 complement(2341943..2342734) 1 NC_017328.1 Ribosomal small subunit pseudouridine synthase A 2342734 rsuA 12319046 rsuA Shigella flexneri 2002017 Ribosomal small subunit pseudouridine synthase A YP_005727915.1 2341943 R 591020 CDS YP_005727916.1 384543853 12319047 2342788..2344548 1 NC_017328.1 putative ATP-dependent helicase 2344548 yejH 12319047 yejH Shigella flexneri 2002017 putative ATP-dependent helicase YP_005727916.1 2342788 D 591020 CDS YP_005727917.1 384543854 12319048 complement(2345096..2346103) 1 NC_017328.1 Nucleoid-associated protein ndpA 2346103 yejK 12319048 yejK Shigella flexneri 2002017 Nucleoid-associated protein ndpA YP_005727917.1 2345096 R 591020 CDS YP_005727918.1 384543855 12319049 2346286..2346513 1 NC_017328.1 hypothetical protein 2346513 12319049 SFxv_2508 Shigella flexneri 2002017 hypothetical protein YP_005727918.1 2346286 D 591020 CDS YP_005727919.1 384543856 12319050 2346533..2348293 1 NC_017328.1 putative sulfatase 2348293 yejM 12319050 yejM Shigella flexneri 2002017 putative sulfatase YP_005727919.1 2346533 D 591020 CDS YP_005727920.1 384543857 12319052 complement(2348547..2351138) 1 NC_017328.1 ATPase 2351138 12319052 SFxv_2511 Shigella flexneri 2002017 ATPase YP_005727920.1 2348547 R 591020 CDS YP_005727921.1 384543858 12319053 2351458..2352105 1 NC_017328.1 Nitrate/nitrite response regulator 2352105 narP 12319053 narP Shigella flexneri 2002017 Nitrate/nitrite response regulator YP_005727921.1 2351458 D 591020 CDS YP_005727922.1 384543859 12319054 complement(2352316..2353368) 1 NC_017328.1 Cytochrome c-type biogenesis protein ccmH precursor 2353368 ccmH 12319054 ccmH Shigella flexneri 2002017 Cytochrome c-type biogenesis protein ccmH precursor YP_005727922.1 2352316 R 591020 CDS YP_005727923.1 384543860 12319055 complement(2353365..2353922) 1 NC_017328.1 Thiol:disulfide interchange protein dsbE 2353922 ccmG 12319055 ccmG Shigella flexneri 2002017 Thiol:disulfide interchange protein dsbE YP_005727923.1 2353365 R 591020 CDS YP_005727924.1 384543861 12319056 complement(2353919..2355862) 1 NC_017328.1 Cytochrome c-type biogenesis protein 2355862 ccmF 12319056 ccmF Shigella flexneri 2002017 Cytochrome c-type biogenesis protein YP_005727924.1 2353919 R 591020 CDS YP_005727925.1 384543862 12319057 complement(2355859..2356338) 1 NC_017328.1 Cytochrome c-type biogenesis protein ccmE 2356338 ccmE 12319057 ccmE Shigella flexneri 2002017 Cytochrome c-type biogenesis protein ccmE YP_005727925.1 2355859 R 591020 CDS YP_005727926.1 384543863 12319058 complement(2356541..2357302) 1 NC_017328.1 Heme exporter protein C 2357302 ccmC 12319058 ccmC Shigella flexneri 2002017 Heme exporter protein C YP_005727926.1 2356541 R 591020 CDS YP_005727927.1 384543864 12319059 complement(2357320..2357982) 1 NC_017328.1 heme exporter protein B 2357982 ccmB 12319059 ccmB Shigella flexneri 2002017 heme exporter protein B YP_005727927.1 2357320 R 591020 CDS YP_005727928.1 384543865 12319060 complement(2357979..2358602) 1 NC_017328.1 Cytochrome c biogenesis ATP-binding export protein ccmA 2358602 ccmA 12319060 ccmA Shigella flexneri 2002017 Cytochrome c biogenesis ATP-binding export protein ccmA YP_005727928.1 2357979 R 591020 CDS YP_005727929.1 384543866 12319061 complement(2358615..2359217) 1 NC_017328.1 Cytochrome c-type protein 2359217 napC 12319061 napC Shigella flexneri 2002017 Cytochrome c-type protein YP_005727929.1 2358615 R 591020 CDS YP_005727930.1 384543867 12319062 complement(2359227..2359676) 1 NC_017328.1 Cytochrome c-type protein 2359676 napB 12319062 napB Shigella flexneri 2002017 Cytochrome c-type protein YP_005727930.1 2359227 R 591020 CDS YP_005727931.1 384543868 12319063 complement(2359673..2360536) 1 NC_017328.1 putative polyferredoxin 2360536 napH 12319063 napH Shigella flexneri 2002017 putative polyferredoxin YP_005727931.1 2359673 R 591020 CDS YP_005727932.1 384543869 12319064 complement(2360523..2361218) 1 NC_017328.1 Ferredoxin-type protein napG 2361218 napG 12319064 napG Shigella flexneri 2002017 Ferredoxin-type protein napG YP_005727932.1 2360523 R 591020 CDS YP_005727933.1 384543870 12319065 complement(2361225..2363711) 1 NC_017328.1 Periplasmic nitrate reductase precursor 2363711 napA 12319065 napA Shigella flexneri 2002017 Periplasmic nitrate reductase precursor YP_005727933.1 2361225 R 591020 CDS YP_005727934.1 384543871 12319066 complement(2363708..2363971) 1 NC_017328.1 assembly protein for periplasmic nitrate reductase 2363971 napD 12319066 napD Shigella flexneri 2002017 assembly protein for periplasmic nitrate reductase YP_005727934.1 2363708 R 591020 CDS YP_005727935.1 384543872 12319067 complement(2363961..2364455) 1 NC_017328.1 Ferredoxin-type protein 2364455 napF 12319067 napF Shigella flexneri 2002017 Ferredoxin-type protein YP_005727935.1 2363961 R 591020 CDS YP_005727936.1 384543873 12319068 2364564..2364728 1 NC_017328.1 hypothetical protein 2364728 12319068 SFxv_2527 Shigella flexneri 2002017 hypothetical protein YP_005727936.1 2364564 D 591020 CDS YP_005727937.1 384543874 12319069 2364863..2365351 1 NC_017328.1 Ecotin 2365351 eco 12319069 eco Shigella flexneri 2002017 Ecotin YP_005727937.1 2364863 D 591020 CDS YP_005727938.1 384543875 12319071 complement(2367315..2368958) 1 NC_017328.1 ATPase 2368958 yojI 12319071 yojI Shigella flexneri 2002017 ATPase YP_005727938.1 2367315 R 591020 CDS YP_005727939.1 384543876 12319072 complement(2369034..2369684) 1 NC_017328.1 Alkylated DNA repair protein 2369684 alkB 12319072 alkB Shigella flexneri 2002017 Alkylated DNA repair protein YP_005727939.1 2369034 R 591020 CDS YP_005727940.1 384543877 12319073 complement(2369684..2370748) 1 NC_017328.1 O6-methylguanine-DNA methyltransferase 2370748 ada 12319073 ada Shigella flexneri 2002017 O6-methylguanine-DNA methyltransferase YP_005727940.1 2369684 R 591020 CDS YP_005727941.1 384543878 12319074 complement(2370822..2371877) 1 NC_017328.1 Thiamine biosynthesis lipoprotein apbE 2371877 apbE 12319074 apbE Shigella flexneri 2002017 Thiamine biosynthesis lipoprotein apbE YP_005727941.1 2370822 R 591020 CDS YP_005727942.1 384543879 12319075 complement(2371989..2373110) 1 NC_017328.1 Outer membrane protein 1b 2373110 ompC 12319075 ompC Shigella flexneri 2002017 Outer membrane protein 1b YP_005727942.1 2371989 R 591020 CDS YP_005727943.1 384543880 12319076 2373848..2376520 1 NC_017328.1 putative 2-component sensor protein 2376520 rcsD 12319076 rcsD Shigella flexneri 2002017 putative 2-component sensor protein YP_005727943.1 2373848 D 591020 CDS YP_005727944.1 384543881 12319077 2376537..2377187 1 NC_017328.1 Capsular synthesis regulator component B 2377187 rcsB 12319077 rcsB Shigella flexneri 2002017 Capsular synthesis regulator component B YP_005727944.1 2376537 D 591020 CDS YP_005727945.1 384543882 12319078 complement(2377387..2380236) 1 NC_017328.1 Integral membrane sensor hybrid histidine kinase precursor 2380236 rcsC 12319078 rcsC Shigella flexneri 2002017 Integral membrane sensor hybrid histidine kinase precursor YP_005727945.1 2377387 R 591020 CDS YP_005727946.1 384543883 12319079 complement(2380511..2381287) 1 NC_017328.1 hypothetical protein 2381287 12319079 SFxv_2540 Shigella flexneri 2002017 hypothetical protein YP_005727946.1 2380511 R 591020 CDS YP_005727947.1 384543884 12319080 complement(2381292..2382941) 1 NC_017328.1 hypothetical protein 2382941 12319080 SFxv_2541 Shigella flexneri 2002017 hypothetical protein YP_005727947.1 2381292 R 591020 CDS YP_005727948.1 384543885 12319081 complement(2382942..2383457) 1 NC_017328.1 Alpha-2-macroglobulin domain protein precursor 2383457 12319081 SFxv_2542 Shigella flexneri 2002017 Alpha-2-macroglobulin domain protein precursor YP_005727948.1 2382942 R 591020 CDS YP_005727949.1 384543886 12319083 complement(2388733..2389356) 1 NC_017328.1 hypothetical protein 2389356 12319083 SFxv_2547 Shigella flexneri 2002017 hypothetical protein YP_005727949.1 2388733 R 591020 CDS YP_005727950.1 384543887 12319085 complement(2391190..2393817) 1 NC_017328.1 DNA gyrase subunit A 2393817 gyrA 12319085 gyrA Shigella flexneri 2002017 DNA gyrase subunit A YP_005727950.1 2391190 R 591020 CDS YP_005727951.1 384543888 12319086 2393964..2394686 1 NC_017328.1 3-demethylubiquinone-9 3-methyltransferase 2394686 ubiG 12319086 ubiG Shigella flexneri 2002017 3-demethylubiquinone-9 3-methyltransferase YP_005727951.1 2393964 D 591020 CDS YP_005727952.1 384543889 12319088 2398564..2398842 1 NC_017328.1 IS2 ORF1 2398842 12319088 SFxv_2552 Shigella flexneri 2002017 IS2 ORF1 YP_005727952.1 2398564 D 591020 CDS YP_005727953.1 384543890 12319089 2398800..2399705 1 NC_017328.1 IS2 ORF2 2399705 12319089 SFxv_2553 Shigella flexneri 2002017 IS2 ORF2 YP_005727953.1 2398800 D 591020 CDS YP_005727954.1 384543891 12319090 complement(2398845..2399276) 1 NC_017328.1 putative IS2 ORF 2399276 12319090 SFxv_2555 Shigella flexneri 2002017 putative IS2 ORF YP_005727954.1 2398845 R 591020 CDS YP_005727955.1 384543892 12319091 complement(2400305..2400448) 1 NC_017328.1 hypothetical protein 2400448 ypaB 12319091 ypaB Shigella flexneri 2002017 hypothetical protein YP_005727955.1 2400305 R 591020 CDS YP_005727956.1 384543893 12319092 2400576..2402861 1 NC_017328.1 ribonucleoside-diphosphate reductase 2402861 nrdA 12319092 nrdA Shigella flexneri 2002017 ribonucleoside-diphosphate reductase YP_005727956.1 2400576 D 591020 CDS YP_005727957.1 384543894 12319093 2402864..2404225 1 NC_017328.1 putative ribonucleotide reductase, beta subunit 2404225 nrdB 12319093 nrdB Shigella flexneri 2002017 putative ribonucleotide reductase, beta subunit YP_005727957.1 2402864 D 591020 CDS YP_005727958.1 384543895 12319094 2404225..2404479 1 NC_017328.1 Ferredoxin 2404479 yfaE 12319094 yfaE Shigella flexneri 2002017 Ferredoxin YP_005727958.1 2404225 D 591020 CDS YP_005727959.1 384543896 12319095 complement(2404533..2405183) 1 NC_017328.1 PH-inducible stress response protein 2405183 inaA 12319095 inaA Shigella flexneri 2002017 PH-inducible stress response protein YP_005727959.1 2404533 R 591020 CDS YP_005727960.1 384543897 12319096 2405398..2405604 1 NC_017328.1 hypothetical protein 2405604 12319096 SFxv_2561 Shigella flexneri 2002017 hypothetical protein YP_005727960.1 2405398 D 591020 CDS YP_005727961.1 384543898 12319097 complement(2405646..2406722) 1 NC_017328.1 Glycerophosphodiester phosphodiesterase 2406722 glpQ 12319097 glpQ Shigella flexneri 2002017 Glycerophosphodiester phosphodiesterase YP_005727961.1 2405646 R 591020 CDS YP_005727962.1 384543899 12319098 complement(2406727..2408085) 1 NC_017328.1 Sn-glycerol-3-phosphate permease 2408085 glpT 12319098 glpT Shigella flexneri 2002017 Sn-glycerol-3-phosphate permease YP_005727962.1 2406727 R 591020 CDS YP_005727963.1 384543900 12319099 2408358..2409986 1 NC_017328.1 Anaerobic glycerol-3-phosphate dehydrogenase subunit A 2409986 glpA 12319099 glpA Shigella flexneri 2002017 Anaerobic glycerol-3-phosphate dehydrogenase subunit A YP_005727963.1 2408358 D 591020 CDS YP_005727964.1 384543901 12319100 2409976..2411235 1 NC_017328.1 anaerobic glycerol-3-phosphate dehydrogenase subunit B 2411235 glpB 12319100 glpB Shigella flexneri 2002017 anaerobic glycerol-3-phosphate dehydrogenase subunit B YP_005727964.1 2409976 D 591020 CDS YP_005727965.1 384543902 12319101 2411232..2412422 1 NC_017328.1 Sn-glycerol-3-phosphate dehydrogenase (Anaerobic), K-small subunit 2412422 glpC 12319101 glpC Shigella flexneri 2002017 Sn-glycerol-3-phosphate dehydrogenase (Anaerobic), K-small subunit YP_005727965.1 2411232 D 591020 CDS YP_005727966.1 384543903 12319102 2412447..2412572 1 NC_017328.1 hypothetical protein 2412572 12319102 SFxv_2567 Shigella flexneri 2002017 hypothetical protein YP_005727966.1 2412447 D 591020 CDS YP_005727967.1 384543904 12319103 2412615..2413565 1 NC_017328.1 hypothetical protein 2413565 12319103 SFxv_2568 Shigella flexneri 2002017 hypothetical protein YP_005727967.1 2412615 D 591020 CDS YP_005727968.1 384543905 12319104 complement(2413606..2414118) 1 NC_017328.1 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 2414118 yfaU 12319104 yfaU Shigella flexneri 2002017 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase YP_005727968.1 2413606 R 591020 CDS YP_005727969.1 384543906 12319105 complement(2414131..2415333) 1 NC_017328.1 CinA family protein 2415333 yfaY 12319105 yfaY Shigella flexneri 2002017 CinA family protein YP_005727969.1 2414131 R 591020 CDS YP_005727970.1 384543907 12319106 complement(2415420..2415983) 1 NC_017328.1 Outer membrane protein, YfaZ 2415983 yfaZ 12319106 yfaZ Shigella flexneri 2002017 Outer membrane protein, YfaZ YP_005727970.1 2415420 R 591020 CDS YP_005727971.1 384543908 12319107 2416157..2416666 1 NC_017328.1 Hydrolase, NUDIX family 2416666 nudI 12319107 nudI Shigella flexneri 2002017 Hydrolase, NUDIX family YP_005727971.1 2416157 D 591020 CDS YP_005727972.1 384543909 12319108 complement(2416705..2417364) 1 NC_017328.1 Protein induced by aluminum 2417364 ais 12319108 ais Shigella flexneri 2002017 Protein induced by aluminum YP_005727972.1 2416705 R 591020 CDS YP_005727973.1 384543910 12319109 2417597..2418754 1 NC_017328.1 DegT/DnrJ/EryC1/StrS aminotransferase 2418754 arnB 12319109 arnB Shigella flexneri 2002017 DegT/DnrJ/EryC1/StrS aminotransferase YP_005727973.1 2417597 D 591020 CDS YP_005727974.1 384543911 12319110 2418758..2419726 1 NC_017328.1 UDP-phosphate 4-amino-4-deoxy-L-arabinose transferase 2419726 arnC 12319110 arnC Shigella flexneri 2002017 UDP-phosphate 4-amino-4-deoxy-L-arabinose transferase YP_005727974.1 2418758 D 591020 CDS YP_005727975.1 384543912 12317815 2420157..2421707 1 NC_017328.1 Bifunctional polymyxin resistance protein arnA 2421707 arnA 12317815 arnA Shigella flexneri 2002017 Bifunctional polymyxin resistance protein arnA YP_005727975.1 2420157 D 591020 CDS YP_005727976.1 384543913 12317816 2421704..2422594 1 NC_017328.1 hypothetical protein 2422594 arnD 12317816 arnD Shigella flexneri 2002017 hypothetical protein YP_005727976.1 2421704 D 591020 CDS YP_005727977.1 384543914 12317817 2422594..2424246 1 NC_017328.1 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase 2424246 arnT 12317817 arnT Shigella flexneri 2002017 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase YP_005727977.1 2422594 D 591020 CDS YP_005727978.1 384543915 12317818 2424243..2424578 1 NC_017328.1 Sucrose-6 phosphate hydrolase 2424578 arnE 12317818 arnE Shigella flexneri 2002017 Sucrose-6 phosphate hydrolase YP_005727978.1 2424243 D 591020 CDS YP_005727979.1 384543916 12317819 2424578..2424964 1 NC_017328.1 putative transport/receptor protein 2424964 arnF 12317819 arnF Shigella flexneri 2002017 putative transport/receptor protein YP_005727979.1 2424578 D 591020 CDS YP_005727980.1 384543917 12317820 complement(2424958..2425230) 1 NC_017328.1 Polymyxin resistance protein B 2425230 pmrD 12317820 pmrD Shigella flexneri 2002017 Polymyxin resistance protein B YP_005727980.1 2424958 R 591020 CDS YP_005727981.1 384543918 12317821 complement(2425335..2426690) 1 NC_017328.1 o-succinylbenzoate--CoA ligase 2426690 menE 12317821 menE Shigella flexneri 2002017 o-succinylbenzoate--CoA ligase YP_005727981.1 2425335 R 591020 CDS YP_005727982.1 384543919 12317822 complement(2426687..2427649) 1 NC_017328.1 o-succinylbenzoate synthase 2427649 menC 12317822 menC Shigella flexneri 2002017 o-succinylbenzoate synthase YP_005727982.1 2426687 R 591020 CDS YP_005727983.1 384543920 12317823 complement(2427649..2428506) 1 NC_017328.1 Dihydroxynaphtoic acid synthetase 2428506 menB 12317823 menB Shigella flexneri 2002017 Dihydroxynaphtoic acid synthetase YP_005727983.1 2427649 R 591020 CDS YP_005727984.1 384543921 12317824 complement(2428521..2429279) 1 NC_017328.1 alpha/beta fold family hydrolase 2429279 yfbB 12317824 yfbB Shigella flexneri 2002017 alpha/beta fold family hydrolase YP_005727984.1 2428521 R 591020 CDS YP_005727985.1 384543922 12317825 complement(2429276..2431135) 1 NC_017328.1 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylic acid synthase/2- oxoglutarate decarboxylase 2431135 menD 12317825 menD Shigella flexneri 2002017 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylic acid synthase/2- oxoglutarate decarboxylase YP_005727985.1 2429276 R 591020 CDS YP_005727986.1 384543923 12317826 complement(2431035..2432330) 1 NC_017328.1 menaquinone-specific isochorismate synthase 2432330 menF 12317826 menF Shigella flexneri 2002017 menaquinone-specific isochorismate synthase YP_005727986.1 2431035 R 591020 CDS YP_005727987.1 384543924 12317827 complement(2432409..2432714) 1 NC_017328.1 hypothetical protein 2432714 12317827 SFxv_2589 Shigella flexneri 2002017 hypothetical protein YP_005727987.1 2432409 R 591020 CDS YP_005727988.1 384543925 12317828 complement(2432769..2433230) 1 NC_017328.1 putative acyltransferase 2433230 elaA 12317828 elaA Shigella flexneri 2002017 putative acyltransferase YP_005727988.1 2432769 R 591020 CDS YP_005727989.1 384543926 12317829 2433326..2434213 1 NC_017328.1 Ribonuclease Z 2434213 rbn 12317829 rbn Shigella flexneri 2002017 Ribonuclease Z YP_005727989.1 2433326 D 591020 CDS YP_005727990.1 384543927 12317830 2434404..2434598 1 NC_017328.1 putative sulfatase/phosphatase 2434598 elaD 12317830 elaD Shigella flexneri 2002017 putative sulfatase/phosphatase YP_005727990.1 2434404 D 591020 CDS YP_005727991.1 384543928 12317831 2434843..2435346 1 NC_017328.1 IS1 orfB 2435346 12317831 SFxv_2593 Shigella flexneri 2002017 IS1 orfB YP_005727991.1 2434843 D 591020 CDS YP_005727992.1 384543929 12317832 2436201..2436626 1 NC_017328.1 putative aminopeptidase 2436626 12317832 SFxv_2594 Shigella flexneri 2002017 putative aminopeptidase YP_005727992.1 2436201 D 591020 CDS YP_005727993.1 384543930 12317833 2436729..2437052 1 NC_017328.1 hypothetical protein 2437052 12317833 SFxv_2595 Shigella flexneri 2002017 hypothetical protein YP_005727993.1 2436729 D 591020 CDS YP_005727994.1 384543931 12317834 complement(2437119..2438576) 1 NC_017328.1 NADH-quinone oxidoreductase subunit N 2438576 nuoN 12317834 nuoN Shigella flexneri 2002017 NADH-quinone oxidoreductase subunit N YP_005727994.1 2437119 R 591020 CDS YP_005727995.1 384543932 12317835 complement(2438583..2440112) 1 NC_017328.1 NADH dehydrogenase I subunit M 2440112 nuoM 12317835 nuoM Shigella flexneri 2002017 NADH dehydrogenase I subunit M YP_005727995.1 2438583 R 591020 CDS YP_005727996.1 384543933 12317836 complement(2440276..2442117) 1 NC_017328.1 NADH dehydrogenase I subunit L 2442117 nuoL 12317836 nuoL Shigella flexneri 2002017 NADH dehydrogenase I subunit L YP_005727996.1 2440276 R 591020 CDS YP_005727997.1 384543934 12317837 complement(2442114..2442416) 1 NC_017328.1 NADH-quinone oxidoreductase subunit K 2442416 nuoK 12317837 nuoK Shigella flexneri 2002017 NADH-quinone oxidoreductase subunit K YP_005727997.1 2442114 R 591020 CDS YP_005727998.1 384543935 12317838 complement(2442413..2442967) 1 NC_017328.1 NADH-quinone oxidoreductase subunit J 2442967 nuoJ 12317838 nuoJ Shigella flexneri 2002017 NADH-quinone oxidoreductase subunit J YP_005727998.1 2442413 R 591020 CDS YP_005727999.1 384543936 12317839 complement(2442979..2443521) 1 NC_017328.1 NADH-quinone oxidoreductase subunit I 2443521 nuoI 12317839 nuoI Shigella flexneri 2002017 NADH-quinone oxidoreductase subunit I YP_005727999.1 2442979 R 591020 CDS YP_005728000.1 384543937 12317840 complement(2443536..2444513) 1 NC_017328.1 NADH-quinone oxidoreductase subunit H 2444513 nuoH 12317840 nuoH Shigella flexneri 2002017 NADH-quinone oxidoreductase subunit H YP_005728000.1 2443536 R 591020 CDS YP_005728001.1 384543938 12317841 complement(2444510..2447242) 1 NC_017328.1 NADH-quinone oxidoreductase subunit G 2447242 nuoG 12317841 nuoG Shigella flexneri 2002017 NADH-quinone oxidoreductase subunit G YP_005728001.1 2444510 R 591020 CDS YP_005728002.1 384543939 12317842 complement(2447289..2448626) 1 NC_017328.1 NADH dehydrogenase I subunit F 2448626 nuoF 12317842 nuoF Shigella flexneri 2002017 NADH dehydrogenase I subunit F YP_005728002.1 2447289 R 591020 CDS YP_005728003.1 384543940 12317843 complement(2448623..2449123) 1 NC_017328.1 NADH-quinone oxidoreductase subunit E 2449123 nuoE 12317843 nuoE Shigella flexneri 2002017 NADH-quinone oxidoreductase subunit E YP_005728003.1 2448623 R 591020 CDS YP_005728004.1 384543941 12317844 complement(2449126..2450928) 1 NC_017328.1 NADH dehydrogenase I chain C, D 2450928 nuoC 12317844 nuoC Shigella flexneri 2002017 NADH dehydrogenase I chain C, D YP_005728004.1 2449126 R 591020 CDS YP_005728005.1 384543942 12317845 complement(2451022..2451684) 1 NC_017328.1 NADH-quinone oxidoreductase subunit B 2451684 nuoB 12317845 nuoB Shigella flexneri 2002017 NADH-quinone oxidoreductase subunit B YP_005728005.1 2451022 R 591020 CDS YP_005728006.1 384543943 12317846 complement(2451700..2452143) 1 NC_017328.1 NADH-quinone oxidoreductase subunit A 2452143 nuoA 12317846 nuoA Shigella flexneri 2002017 NADH-quinone oxidoreductase subunit A YP_005728006.1 2451700 R 591020 CDS YP_005728007.1 384543944 12317847 complement(2452774..2453712) 1 NC_017328.1 LysR family NADH dehydrogenase transcriptional regulator 2453712 lrhA 12317847 lrhA Shigella flexneri 2002017 LysR family NADH dehydrogenase transcriptional regulator YP_005728007.1 2452774 R 591020 CDS YP_005728008.1 384543945 12317848 2454631..2455848 1 NC_017328.1 putative aminotransferase yfbQ 2455848 yfbQ 12317848 yfbQ Shigella flexneri 2002017 putative aminotransferase yfbQ YP_005728008.1 2454631 D 591020 CDS YP_005728009.1 384543946 12317849 2455932..2456531 1 NC_017328.1 5'-nucleotidase yfbR 2456531 yfbR 12317849 yfbR Shigella flexneri 2002017 5'-nucleotidase yfbR YP_005728009.1 2455932 D 591020 CDS YP_005728010.1 384543947 12317850 complement(2456590..2458422) 1 NC_017328.1 putative transport protein 2458422 yfbS 12317850 yfbS Shigella flexneri 2002017 putative transport protein YP_005728010.1 2456590 R 591020 CDS YP_005728011.1 384543948 12317851 complement(2458509..2459159) 1 NC_017328.1 Sugar-phosphatase, YfbT 2459159 yfbT 12317851 yfbT Shigella flexneri 2002017 Sugar-phosphatase, YfbT YP_005728011.1 2458509 R 591020 CDS YP_005728012.1 384543949 12317852 complement(2459170..2459664) 1 NC_017328.1 Protein yfbU 2459664 yfbU 12317852 yfbU Shigella flexneri 2002017 Protein yfbU YP_005728012.1 2459170 R 591020 CDS YP_005728013.1 384543950 12317853 complement(2459747..2460202) 1 NC_017328.1 membrane protein yfbV 2460202 yfbV 12317853 yfbV Shigella flexneri 2002017 membrane protein yfbV YP_005728013.1 2459747 R 591020 CDS YP_005728014.1 384543951 12317854 2460541..2461743 1 NC_017328.1 acetate kinase 2461743 ackA 12317854 ackA Shigella flexneri 2002017 acetate kinase YP_005728014.1 2460541 D 591020 CDS YP_005728015.1 384543952 12317855 2461818..2463962 1 NC_017328.1 phosphate acetyltransferase 2463962 pta 12317855 pta Shigella flexneri 2002017 phosphate acetyltransferase YP_005728015.1 2461818 D 591020 CDS YP_005728016.1 384543953 12317856 2464152..2465672 1 NC_017328.1 putative S-transferase 2465672 yfcC 12317856 yfcC Shigella flexneri 2002017 putative S-transferase YP_005728016.1 2464152 D 591020 CDS YP_005728017.1 384543954 12317857 complement(2465705..2466247) 1 NC_017328.1 putative Nudix hydrolase yfcD 2466247 yfcD 12317857 yfcD Shigella flexneri 2002017 putative Nudix hydrolase yfcD YP_005728017.1 2465705 R 591020 CDS YP_005728018.1 384543955 12317858 complement(2466305..2466859) 1 NC_017328.1 phosphodiesterase 2466859 yfcE 12317858 yfcE Shigella flexneri 2002017 phosphodiesterase YP_005728018.1 2466305 R 591020 CDS YP_005728019.1 384543956 12317859 complement(2466912..2467556) 1 NC_017328.1 glutathione S-transferase 2467556 yfcF 12317859 yfcF Shigella flexneri 2002017 glutathione S-transferase YP_005728019.1 2466912 R 591020 CDS YP_005728020.1 384543957 12317860 2467692..2468339 1 NC_017328.1 putative S-transferase 2468339 yfcG 12317860 yfcG Shigella flexneri 2002017 putative S-transferase YP_005728020.1 2467692 D 591020 CDS YP_005728021.1 384543958 12317861 2468396..2468758 1 NC_017328.1 D-erythro-7,8-dihydroneopterin triphosphate epimerase 2468758 folX 12317861 folX Shigella flexneri 2002017 D-erythro-7,8-dihydroneopterin triphosphate epimerase YP_005728021.1 2468396 D 591020 CDS YP_005728022.1 384543959 12317862 2468779..2469672 1 NC_017328.1 putative sugar nucleotide epimerase 2469672 yfcH 12317862 yfcH Shigella flexneri 2002017 putative sugar nucleotide epimerase YP_005728022.1 2468779 D 591020 CDS YP_005728023.1 384543960 12317863 complement(2469720..2470610) 1 NC_017328.1 hypothetical protein 2470610 12317863 SFxv_2626 Shigella flexneri 2002017 hypothetical protein YP_005728023.1 2469720 R 591020 CDS YP_005728024.1 384543961 12317864 complement(2470807..2471580) 1 NC_017328.1 histidine transport 2471580 hisP 12317864 hisP Shigella flexneri 2002017 histidine transport YP_005728024.1 2470807 R 591020 CDS YP_005728025.1 384543962 12317865 complement(2471588..2472304) 1 NC_017328.1 Histidine transport system permease protein hisM 2472304 hisM 12317865 hisM Shigella flexneri 2002017 Histidine transport system permease protein hisM YP_005728025.1 2471588 R 591020 CDS YP_005728026.1 384543963 12317866 complement(2472301..2472987) 1 NC_017328.1 Histidine transport system permease protein 2472987 hisQ 12317866 hisQ Shigella flexneri 2002017 Histidine transport system permease protein YP_005728026.1 2472301 R 591020 CDS YP_005728027.1 384543964 12317867 complement(2473077..2473859) 1 NC_017328.1 Histidine-binding periplasmic protein of high-affinity histidine transport system 2473859 hisJ 12317867 hisJ Shigella flexneri 2002017 Histidine-binding periplasmic protein of high-affinity histidine transport system YP_005728027.1 2473077 R 591020 CDS YP_005728028.1 384543965 12317868 complement(2474080..2474862) 1 NC_017328.1 Lysine-, arginine-, ornithine-binding periplasmic protein 2474862 argT 12317868 argT Shigella flexneri 2002017 Lysine-, arginine-, ornithine-binding periplasmic protein YP_005728028.1 2474080 R 591020 CDS YP_005728029.1 384543966 12317869 complement(2475128..2475697) 1 NC_017328.1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 2475697 ubiX 12317869 ubiX Shigella flexneri 2002017 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_005728029.1 2475128 R 591020 CDS YP_005728030.1 384543967 12317870 complement(2475792..2477309) 1 NC_017328.1 Amidophosphoribosyltransferase 2477309 purF 12317870 purF Shigella flexneri 2002017 Amidophosphoribosyltransferase YP_005728030.1 2475792 R 591020 CDS YP_005728031.1 384543968 12317871 complement(2477346..2477834) 1 NC_017328.1 colicin V production protein 2477834 cvpA 12317871 cvpA Shigella flexneri 2002017 colicin V production protein YP_005728031.1 2477346 R 591020 CDS YP_005728032.1 384543969 12317872 complement(2478093..2478755) 1 NC_017328.1 putative lipoprotein 2478755 dedD 12317872 dedD Shigella flexneri 2002017 putative lipoprotein YP_005728032.1 2478093 R 591020 CDS YP_005728033.1 384543970 12317873 complement(2478745..2480013) 1 NC_017328.1 Dihydrofolate:folylpolyglutamate synthetase; dihydrofolate synthetase 2480013 folC 12317873 folC Shigella flexneri 2002017 Dihydrofolate:folylpolyglutamate synthetase; dihydrofolate synthetase YP_005728033.1 2478745 R 591020 CDS YP_005728034.1 384543971 12317874 complement(2480083..2480997) 1 NC_017328.1 Acetyl CoA carboxylase, carboxytransferase component, beta subunit 2480997 accD 12317874 accD Shigella flexneri 2002017 Acetyl CoA carboxylase, carboxytransferase component, beta subunit YP_005728034.1 2480083 R 591020 CDS YP_005728035.1 384543972 12317875 complement(2481153..2481812) 1 NC_017328.1 hypothetical protein 2481812 12317875 SFxv_2638 Shigella flexneri 2002017 hypothetical protein YP_005728035.1 2481153 R 591020 CDS YP_005728036.1 384543973 12317876 complement(2481895..2482707) 1 NC_017328.1 tRNA pseudouridine synthase A 2482707 truA 12317876 truA Shigella flexneri 2002017 tRNA pseudouridine synthase A YP_005728036.1 2481895 R 591020 CDS YP_005728037.1 384543974 12317877 complement(2482707..2483720) 1 NC_017328.1 putative PTS system enzyme II A component 2483720 usg 12317877 usg Shigella flexneri 2002017 putative PTS system enzyme II A component YP_005728037.1 2482707 R 591020 CDS YP_005728038.1 384543975 12317878 complement(2483786..2484922) 1 NC_017328.1 erythronate-4-phosphate dehydrogenase 2484922 pdxB 12317878 pdxB Shigella flexneri 2002017 erythronate-4-phosphate dehydrogenase YP_005728038.1 2483786 R 591020 CDS YP_005728039.1 384543976 12317879 2485021..2486016 1 NC_017328.1 cell division protein 2486016 flk 12317879 flk Shigella flexneri 2002017 cell division protein YP_005728039.1 2485021 D 591020 CDS YP_005728040.1 384543977 12317880 complement(2486013..2487191) 1 NC_017328.1 putative transport protein 2487191 yfcJ 12317880 yfcJ Shigella flexneri 2002017 putative transport protein YP_005728040.1 2486013 R 591020 CDS YP_005728041.1 384543978 12317881 complement(2487446..2488687) 1 NC_017328.1 3-oxoacyl-ACP synthase 2488687 fabB 12317881 fabB Shigella flexneri 2002017 3-oxoacyl-ACP synthase YP_005728041.1 2487446 R 591020 CDS YP_005728042.1 384543979 12317882 2488846..2490852 1 NC_017328.1 putative peptidase 2490852 mnmC 12317882 mnmC Shigella flexneri 2002017 putative peptidase YP_005728042.1 2488846 D 591020 CDS YP_005728043.1 384543980 12317883 complement(2490973..2491251) 1 NC_017328.1 hypothetical protein 2491251 12317883 SFxv_2646 Shigella flexneri 2002017 hypothetical protein YP_005728043.1 2490973 R 591020 CDS YP_005728044.1 384543981 12317884 complement(2491285..2491833) 1 NC_017328.1 putative transporting ATPase 2491833 yfcM 12317884 yfcM Shigella flexneri 2002017 putative transporting ATPase YP_005728044.1 2491285 R 591020 CDS YP_005728045.1 384543982 12317885 complement(2491833..2492642) 1 NC_017328.1 putative structural protein 2492642 yfcA 12317885 yfcA Shigella flexneri 2002017 putative structural protein YP_005728045.1 2491833 R 591020 CDS YP_005728046.1 384543983 12317886 complement(2492642..2493466) 1 NC_017328.1 Penicillin-insensitive murein endopeptidase precursor 2493466 mepA 12317886 mepA Shigella flexneri 2002017 Penicillin-insensitive murein endopeptidase precursor YP_005728046.1 2492642 R 591020 CDS YP_005728047.1 384543984 12317887 complement(2493470..2494555) 1 NC_017328.1 Chorismate synthase 2494555 aroC 12317887 aroC Shigella flexneri 2002017 Chorismate synthase YP_005728047.1 2493470 R 591020 CDS YP_005728048.1 384543985 12317888 complement(2494590..2495855) 1 NC_017328.1 putative adenine-specific methylase 2495855 prmB 12317888 prmB Shigella flexneri 2002017 putative adenine-specific methylase YP_005728048.1 2494590 R 591020 CDS YP_005728049.1 384543986 12317889 2495688..2496239 1 NC_017328.1 putative Smr domain protein 2496239 yfcN 12317889 yfcN Shigella flexneri 2002017 putative Smr domain protein YP_005728049.1 2495688 D 591020 CDS YP_005728050.1 384543987 12317890 complement(2496343..2497233) 1 NC_017328.1 hypothetical protein 2497233 12317890 SFxv_2653 Shigella flexneri 2002017 hypothetical protein YP_005728050.1 2496343 R 591020 CDS YP_005728051.1 384543988 12317891 complement(2497220..2497744) 1 NC_017328.1 fimbrial-like protein 2497744 12317891 SFxv_2654 Shigella flexneri 2002017 fimbrial-like protein YP_005728051.1 2497220 R 591020 CDS YP_005728052.1 384543989 12317892 complement(2497741..2498211) 1 NC_017328.1 putative minor fimbrial subunit 2498211 12317892 SFxv_2655 Shigella flexneri 2002017 putative minor fimbrial subunit YP_005728052.1 2497741 R 591020 CDS YP_005728053.1 384543990 12317893 complement(2498208..2498756) 1 NC_017328.1 putative minor fimbrial subunit 2498756 12317893 SFxv_2656 Shigella flexneri 2002017 putative minor fimbrial subunit YP_005728053.1 2498208 R 591020 CDS YP_005728054.1 384543991 12317896 complement(2502225..2502788) 1 NC_017328.1 putative fimbrial-like protein 2502788 yfcV 12317896 yfcV Shigella flexneri 2002017 putative fimbrial-like protein YP_005728054.1 2502225 R 591020 CDS YP_005728055.1 384543992 12317897 complement(2503057..2503560) 1 NC_017328.1 IS1 ORF2 2503560 12317897 SFxv_2660 Shigella flexneri 2002017 IS1 ORF2 YP_005728055.1 2503057 R 591020 CDS YP_005728056.1 384543993 12317898 2503674..2503844 1 NC_017328.1 IS600 ORF2 2503844 12317898 SFxv_2661 Shigella flexneri 2002017 IS600 ORF2 YP_005728056.1 2503674 D 591020 CDS YP_005728057.1 384543994 12317899 complement(2504249..2504734) 1 NC_017328.1 Phosphohistidine phosphatase sixA 2504734 sixA 12317899 sixA Shigella flexneri 2002017 Phosphohistidine phosphatase sixA YP_005728057.1 2504249 R 591020 CDS YP_005728058.1 384543995 12317900 complement(2504937..2507081) 1 NC_017328.1 Fatty acid oxidation complex subunit alpha 2507081 fadJ 12317900 fadJ Shigella flexneri 2002017 Fatty acid oxidation complex subunit alpha YP_005728058.1 2504937 R 591020 CDS YP_005728059.1 384543996 12317901 complement(2507081..2508391) 1 NC_017328.1 3-ketoacyl-CoA thiolase 2508391 fadI 12317901 fadI Shigella flexneri 2002017 3-ketoacyl-CoA thiolase YP_005728059.1 2507081 R 591020 CDS YP_005728060.1 384543997 12317902 complement(2508571..2508879) 1 NC_017328.1 hypothetical protein 2508879 yfcZ 12317902 yfcZ Shigella flexneri 2002017 hypothetical protein YP_005728060.1 2508571 R 591020 CDS YP_005728061.1 384543998 12317903 2509221..2510567 1 NC_017328.1 Transport of long-chain fatty acids 2510567 fadL 12317903 fadL Shigella flexneri 2002017 Transport of long-chain fatty acids YP_005728061.1 2509221 D 591020 CDS YP_005728062.1 384543999 12317904 2510933..2511991 1 NC_017328.1 hypothetical protein 2511991 12317904 SFxv_2668 Shigella flexneri 2002017 hypothetical protein YP_005728062.1 2510933 D 591020 CDS YP_005728063.1 384544000 12317905 complement(2512174..2512929) 1 NC_017328.1 Lipoprotein vacJ precursor 2512929 vacJ 12317905 vacJ Shigella flexneri 2002017 Lipoprotein vacJ precursor YP_005728063.1 2512174 R 591020 CDS YP_005728064.1 384544001 12317906 2513334..2514155 1 NC_017328.1 hypothetical protein 2514155 yfdC 12317906 yfdC Shigella flexneri 2002017 hypothetical protein YP_005728064.1 2513334 D 591020 CDS YP_005728065.1 384544002 12317908 2514429..2514959 1 NC_017328.1 putative prophage integrase 2514959 intS 12317908 intS Shigella flexneri 2002017 putative prophage integrase YP_005728065.1 2514429 D 591020 CDS YP_005728066.1 384544003 12317909 complement(2514934..2515773) 1 NC_017328.1 IS911 orfA 2515773 12317909 SFxv_2672 Shigella flexneri 2002017 IS911 orfA YP_005728066.1 2514934 R 591020 CDS YP_005728067.1 384544004 12317910 complement(2516083..2516706) 1 NC_017328.1 IS4 ORF 2516706 12317910 SFxv_2673 Shigella flexneri 2002017 IS4 ORF YP_005728067.1 2516083 R 591020 CDS YP_005728068.1 384544005 12317911 2517004..2518437 1 NC_017328.1 sucrose-6-phosphate hydrolase 2518437 12317911 SFxv_2675 Shigella flexneri 2002017 sucrose-6-phosphate hydrolase YP_005728068.1 2517004 D 591020 CDS YP_005728069.1 384544006 12317912 complement(2518445..2519503) 1 NC_017328.1 putative transcriptional regulator 2519503 12317912 SFxv_2676 Shigella flexneri 2002017 putative transcriptional regulator YP_005728069.1 2518445 R 591020 CDS YP_005728070.1 384544007 12317913 2519671..2519889 1 NC_017328.1 DsdX permease 2519889 dsdX 12317913 dsdX Shigella flexneri 2002017 DsdX permease YP_005728070.1 2519671 D 591020 CDS YP_005728071.1 384544008 12317914 2519907..2521235 1 NC_017328.1 D-serine dehydratase 2521235 dsdA 12317914 dsdA Shigella flexneri 2002017 D-serine dehydratase YP_005728071.1 2519907 D 591020 CDS YP_005728072.1 384544009 12317915 complement(2521343..2522881) 1 NC_017328.1 Multidrug resistance protein Y 2522881 emrY 12317915 emrY Shigella flexneri 2002017 Multidrug resistance protein Y YP_005728072.1 2521343 R 591020 CDS YP_005728073.1 384544010 12317916 complement(2522881..2524044) 1 NC_017328.1 Multidrug resistance protein K 2524044 emrK 12317916 emrK Shigella flexneri 2002017 Multidrug resistance protein K YP_005728073.1 2522881 R 591020 CDS YP_005728074.1 384544011 12317917 2524460..2525074 1 NC_017328.1 Positive transcription regulator evgA 2525074 evgA 12317917 evgA Shigella flexneri 2002017 Positive transcription regulator evgA YP_005728074.1 2524460 D 591020 CDS YP_005728075.1 384544012 12317918 2525406..2528672 1 NC_017328.1 putative Sensor protein 2528672 evgS 12317918 evgS Shigella flexneri 2002017 putative Sensor protein YP_005728075.1 2525406 D 591020 CDS YP_005728076.1 384544013 12317919 complement(2528728..2529912) 1 NC_017328.1 hypothetical protein 2529912 12317919 SFxv_2683 Shigella flexneri 2002017 hypothetical protein YP_005728076.1 2528728 R 591020 CDS YP_005728077.1 384544014 12317920 complement(2529947..2530891) 1 NC_017328.1 putative transporter yfdV 2530891 yfdV 12317920 yfdV Shigella flexneri 2002017 putative transporter yfdV YP_005728077.1 2529947 R 591020 CDS YP_005728078.1 384544015 12317921 complement(2530961..2532655) 1 NC_017328.1 putative oxalyl-CoA decarboxylase 2532655 oxc 12317921 oxc Shigella flexneri 2002017 putative oxalyl-CoA decarboxylase YP_005728078.1 2530961 R 591020 CDS YP_005728079.1 384544016 12317922 complement(2532709..2533959) 1 NC_017328.1 Formyl-coenzyme A transferase 2533959 frc 12317922 frc Shigella flexneri 2002017 Formyl-coenzyme A transferase YP_005728079.1 2532709 R 591020 CDS YP_005728080.1 384544017 12317923 complement(2534472..2535095) 1 NC_017328.1 hypothetical protein 2535095 12317923 SFxv_2687 Shigella flexneri 2002017 hypothetical protein YP_005728080.1 2534472 R 591020 CDS YP_005728081.1 384544018 12317924 2535392..2535667 1 NC_017328.1 hypothetical protein 2535667 12317924 SFxv_2688 Shigella flexneri 2002017 hypothetical protein YP_005728081.1 2535392 D 591020 CDS YP_005728082.1 384544019 12317925 complement(2535744..2535986) 1 NC_017328.1 inner membrane protein 2535986 yfdY 12317925 yfdY Shigella flexneri 2002017 inner membrane protein YP_005728082.1 2535744 R 591020 CDS YP_005728083.1 384544020 12317926 2536339..2537259 1 NC_017328.1 Lipid A biosynthesis lauroyl acyltransferase family protein 2537259 lpxP 12317926 lpxP Shigella flexneri 2002017 Lipid A biosynthesis lauroyl acyltransferase family protein YP_005728083.1 2536339 D 591020 CDS YP_005728084.1 384544021 12317927 2537569..2537685 1 NC_017328.1 hypothetical protein 2537685 12317927 SFxv_2691 Shigella flexneri 2002017 hypothetical protein YP_005728084.1 2537569 D 591020 CDS YP_005728085.1 384544022 12317928 complement(2537750..2538988) 1 NC_017328.1 putative aminotransferase 2538988 yfdZ 12317928 yfdZ Shigella flexneri 2002017 putative aminotransferase YP_005728085.1 2537750 R 591020 CDS YP_005728086.1 384544023 12317929 2539730..2540851 1 NC_017328.1 YpdA, sensory kinase in two-component system with YpdB 2540851 ypdA 12317929 ypdA Shigella flexneri 2002017 YpdA, sensory kinase in two-component system with YpdB YP_005728086.1 2539730 D 591020 CDS YP_005728087.1 384544024 12317930 2540866..2541600 1 NC_017328.1 putative response regulatory protein ypdB 2541600 ypdB 12317930 ypdB Shigella flexneri 2002017 putative response regulatory protein ypdB YP_005728087.1 2540866 D 591020 CDS YP_005728088.1 384544025 12317931 2541613..2542185 1 NC_017328.1 AraC family transcriptional regulator 2542185 ypdC 12317931 ypdC Shigella flexneri 2002017 AraC family transcriptional regulator YP_005728088.1 2541613 D 591020 CDS YP_005728089.1 384544026 12317932 complement(2542473..2544968) 1 NC_017328.1 putative Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) 2544968 fryA 12317932 fryA Shigella flexneri 2002017 putative Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) YP_005728089.1 2542473 R 591020 CDS YP_005728090.1 384544027 12317933 complement(2544993..2546030) 1 NC_017328.1 putative Cellulase M-like protein 2546030 ypdE 12317933 ypdE Shigella flexneri 2002017 putative Cellulase M-like protein YP_005728090.1 2544993 R 591020 CDS YP_005728091.1 384544028 12317934 complement(2546448..2547113) 1 NC_017328.1 putative Xaa-Pro aminopeptidase 2547113 ypdF 12317934 ypdF Shigella flexneri 2002017 putative Xaa-Pro aminopeptidase YP_005728091.1 2546448 R 591020 CDS YP_005728092.1 384544029 12317935 complement(2547128..2548375) 1 NC_017328.1 Fructose-like permease IIC component 2548375 fryC 12317935 fryC Shigella flexneri 2002017 Fructose-like permease IIC component YP_005728092.1 2547128 R 591020 CDS YP_005728093.1 384544030 12317936 complement(2548397..2548723) 1 NC_017328.1 Fructose-like phosphotransferase enzyme IIB component 1 2548723 fryB 12317936 fryB Shigella flexneri 2002017 Fructose-like phosphotransferase enzyme IIB component 1 YP_005728093.1 2548397 R 591020 CDS YP_005728094.1 384544031 12317937 complement(2548942..2549907) 1 NC_017328.1 glucokinase 2549907 glk 12317937 glk Shigella flexneri 2002017 glucokinase YP_005728094.1 2548942 R 591020 CDS YP_005728095.1 384544032 12317938 2550111..2551367 1 NC_017328.1 putative ion-transport protein yfeO 2551367 yfeO 12317938 yfeO Shigella flexneri 2002017 putative ion-transport protein yfeO YP_005728095.1 2550111 D 591020 CDS YP_005728096.1 384544033 12317939 2551546..2551890 1 NC_017328.1 hypothetical protein 2551890 12317939 SFxv_2703 Shigella flexneri 2002017 hypothetical protein YP_005728096.1 2551546 D 591020 CDS YP_005728097.1 384544034 12317940 complement(2551949..2553187) 1 NC_017328.1 Manganese transport protein mntH 2553187 mntH 12317940 mntH Shigella flexneri 2002017 Manganese transport protein mntH YP_005728097.1 2551949 R 591020 CDS YP_005728098.1 384544035 12317941 2553523..2554725 1 NC_017328.1 Nucleoside permease nupC 2554725 nupC 12317941 nupC Shigella flexneri 2002017 Nucleoside permease nupC YP_005728098.1 2553523 D 591020 CDS YP_005728099.1 384544036 12317945 2557505..2557864 1 NC_017328.1 hypothetical protein 2557864 12317945 SFxv_2708 Shigella flexneri 2002017 hypothetical protein YP_005728099.1 2557505 D 591020 CDS YP_005728100.1 384544037 12317946 2557866..2558258 1 NC_017328.1 DNA-binding transcriptional regulator 2558258 yfeD 12317946 yfeD Shigella flexneri 2002017 DNA-binding transcriptional regulator YP_005728100.1 2557866 D 591020 CDS YP_005728101.1 384544038 12317947 complement(2558310..2559725) 1 NC_017328.1 glutamyl-tRNA synthetase 2559725 gltX 12317947 gltX Shigella flexneri 2002017 glutamyl-tRNA synthetase YP_005728101.1 2558310 R 591020 CDS YP_005728102.1 384544039 12317951 complement(2560867..2561793) 1 NC_017328.1 putative HTH-type transcriptional regulator yfeR 2561793 yfeR 12317951 yfeR Shigella flexneri 2002017 putative HTH-type transcriptional regulator yfeR YP_005728102.1 2560867 R 591020 CDS YP_005728103.1 384544040 12317952 2561883..2562881 1 NC_017328.1 putative cytochrome oxidase 2562881 yfeH 12317952 yfeH Shigella flexneri 2002017 putative cytochrome oxidase YP_005728103.1 2561883 D 591020 CDS YP_005728104.1 384544041 12317953 complement(2562878..2563096) 1 NC_017328.1 hypothetical protein 2563096 12317953 SFxv_2714 Shigella flexneri 2002017 hypothetical protein YP_005728104.1 2562878 R 591020 CDS YP_005728105.1 384544042 12317954 complement(2563098..2565113) 1 NC_017328.1 NAD-dependent DNA ligase 2565113 ligA 12317954 ligA Shigella flexneri 2002017 NAD-dependent DNA ligase YP_005728105.1 2563098 R 591020 CDS YP_005728106.1 384544043 12317955 complement(2565184..2566209) 1 NC_017328.1 Cell division protein zipA 2566209 zipA 12317955 zipA Shigella flexneri 2002017 Cell division protein zipA YP_005728106.1 2565184 R 591020 CDS YP_005728107.1 384544044 12317956 2566401..2567162 1 NC_017328.1 Protein cysZ 2567162 cysZ 12317956 cysZ Shigella flexneri 2002017 Protein cysZ YP_005728107.1 2566401 D 591020 CDS YP_005728108.1 384544045 12317957 2567347..2568318 1 NC_017328.1 Cysteine synthase A 2568318 cysK 12317957 cysK Shigella flexneri 2002017 Cysteine synthase A YP_005728108.1 2567347 D 591020 CDS YP_005728109.1 384544046 12317958 2568702..2568959 1 NC_017328.1 PTS system, phosphocarrier protein 2568959 ptsH 12317958 ptsH Shigella flexneri 2002017 PTS system, phosphocarrier protein YP_005728109.1 2568702 D 591020 CDS YP_005728110.1 384544047 12317959 2569004..2570731 1 NC_017328.1 Phosphoenolpyruvate-protein phosphotransferase system enzyme I 2570731 ptsI 12317959 ptsI Shigella flexneri 2002017 Phosphoenolpyruvate-protein phosphotransferase system enzyme I YP_005728110.1 2569004 D 591020 CDS YP_005728111.1 384544048 12317960 2570772..2571281 1 NC_017328.1 Glucose-specific phosphotransferase enzyme IIA component 2571281 crr 12317960 crr Shigella flexneri 2002017 Glucose-specific phosphotransferase enzyme IIA component YP_005728111.1 2570772 D 591020 CDS YP_005728112.1 384544049 12317961 complement(2571323..2572174) 1 NC_017328.1 Pyridoxal/pyridoxine/pyridoxamine kinase 2572174 pdxK 12317961 pdxK Shigella flexneri 2002017 Pyridoxal/pyridoxine/pyridoxamine kinase YP_005728112.1 2571323 R 591020 CDS YP_005728113.1 384544050 12317962 2572279..2572653 1 NC_017328.1 hypothetical protein 2572653 12317962 SFxv_2723 Shigella flexneri 2002017 hypothetical protein YP_005728113.1 2572279 D 591020 CDS YP_005728114.1 384544051 12317964 complement(2573613..2574602) 1 NC_017328.1 cysteine synthase 2574602 cysM 12317964 cysM Shigella flexneri 2002017 cysteine synthase YP_005728114.1 2573613 R 591020 CDS YP_005728115.1 384544052 12317965 complement(2574658..2575755) 1 NC_017328.1 Sulfate/thiosulfate import ATP-binding protein cysA 2575755 cysA 12317965 cysA Shigella flexneri 2002017 Sulfate/thiosulfate import ATP-binding protein cysA YP_005728115.1 2574658 R 591020 CDS YP_005728116.1 384544053 12317966 complement(2575745..2576620) 1 NC_017328.1 Sulfate transport system permease protein cysW 2576620 cysW 12317966 cysW Shigella flexneri 2002017 Sulfate transport system permease protein cysW YP_005728116.1 2575745 R 591020 CDS YP_005728117.1 384544054 12317967 complement(2576620..2577453) 1 NC_017328.1 Sulfate, thiosulfate transport system permease T protein 2577453 cysU 12317967 cysU Shigella flexneri 2002017 Sulfate, thiosulfate transport system permease T protein YP_005728117.1 2576620 R 591020 CDS YP_005728118.1 384544055 12317968 complement(2577453..2578469) 1 NC_017328.1 Thiosulfate-binding protein 2578469 cysP 12317968 cysP Shigella flexneri 2002017 Thiosulfate-binding protein YP_005728118.1 2577453 R 591020 CDS YP_005728119.1 384544056 12317969 complement(2578773..2579564) 1 NC_017328.1 Oxidoreductase ucpA 2579564 ucpA 12317969 ucpA Shigella flexneri 2002017 Oxidoreductase ucpA YP_005728119.1 2578773 R 591020 CDS YP_005728120.1 384544057 12317970 complement(2579751..2580752) 1 NC_017328.1 RpiR family transcriptional regulator 2580752 yfeT 12317970 yfeT Shigella flexneri 2002017 RpiR family transcriptional regulator YP_005728120.1 2579751 R 591020 CDS YP_005728121.1 384544058 12317971 2580715..2581611 1 NC_017328.1 N-acetylmuramic acid 6-phosphate etherase 2581611 murQ 12317971 murQ Shigella flexneri 2002017 N-acetylmuramic acid 6-phosphate etherase YP_005728121.1 2580715 D 591020 CDS YP_005728122.1 384544059 12317972 2581615..2583039 1 NC_017328.1 PTS system N-acetylmuramic acid-specific EIIBC component 2583039 murP 12317972 murP Shigella flexneri 2002017 PTS system N-acetylmuramic acid-specific EIIBC component YP_005728122.1 2581615 D 591020 CDS YP_005728123.1 384544060 12317973 complement(2583219..2584145) 1 NC_017328.1 dyp-type peroxidase family protein 2584145 yfeX 12317973 yfeX Shigella flexneri 2002017 dyp-type peroxidase family protein YP_005728123.1 2583219 R 591020 CDS YP_005728124.1 384544061 12317974 complement(2584214..2584789) 1 NC_017328.1 hypothetical protein 2584789 12317974 SFxv_2736 Shigella flexneri 2002017 hypothetical protein YP_005728124.1 2584214 R 591020 CDS YP_005728125.1 384544062 12317975 complement(2584850..2585305) 1 NC_017328.1 hypothetical protein 2585305 12317975 SFxv_2737 Shigella flexneri 2002017 hypothetical protein YP_005728125.1 2584850 R 591020 CDS YP_005728126.1 384544063 12317976 complement(2585286..2585822) 1 NC_017328.1 Acetyltransferase ypeA 2585822 ypeA 12317976 ypeA Shigella flexneri 2002017 Acetyltransferase ypeA YP_005728126.1 2585286 R 591020 CDS YP_005728127.1 384544064 12317977 2586171..2586794 1 NC_017328.1 putative N-acetylmuramoyl-L-alanine amidase 2586794 amiA 12317977 amiA Shigella flexneri 2002017 putative N-acetylmuramoyl-L-alanine amidase YP_005728127.1 2586171 D 591020 CDS YP_005728128.1 384544065 12317978 2586798..2587697 1 NC_017328.1 Coproporphyrinogen III oxidase, aerobic 2587697 hemF 12317978 hemF Shigella flexneri 2002017 Coproporphyrinogen III oxidase, aerobic YP_005728128.1 2586798 D 591020 CDS YP_005728129.1 384544066 12317979 complement(2587703..2588329) 1 NC_017328.1 Ethanolamine operon regulatory protein 2588329 eutR 12317979 eutR Shigella flexneri 2002017 Ethanolamine operon regulatory protein YP_005728129.1 2587703 R 591020 CDS YP_005728130.1 384544067 12317980 complement(2588801..2589307) 1 NC_017328.1 Ethanolamine utilization protein EutK 2589307 eutK 12317980 eutK Shigella flexneri 2002017 Ethanolamine utilization protein EutK YP_005728130.1 2588801 R 591020 CDS YP_005728131.1 384544068 12317981 complement(2589314..2589973) 1 NC_017328.1 Microcompartments protein 2589973 eutL 12317981 eutL Shigella flexneri 2002017 Microcompartments protein YP_005728131.1 2589314 R 591020 CDS YP_005728132.1 384544069 12317982 2591156..2591947 1 NC_017328.1 hypothetical protein 2591947 12317982 SFxv_2745 Shigella flexneri 2002017 hypothetical protein YP_005728132.1 2591156 D 591020 CDS YP_005728133.1 384544070 12317983 2592666..2593061 1 NC_017328.1 HNH endonuclease 2593061 12317983 SFxv_2746 Shigella flexneri 2002017 HNH endonuclease YP_005728133.1 2592666 D 591020 CDS YP_005728134.1 384544071 12317984 2593079..2593342 1 NC_017328.1 hypothetical protein 2593342 12317984 SFxv_2747 Shigella flexneri 2002017 hypothetical protein YP_005728134.1 2593079 D 591020 CDS YP_005728135.1 384544072 12317985 2593366..2593908 1 NC_017328.1 hypothetical protein 2593908 12317985 SFxv_2748 Shigella flexneri 2002017 hypothetical protein YP_005728135.1 2593366 D 591020 CDS YP_005728136.1 384544073 12317986 2594005..2594334 1 NC_017328.1 hypothetical protein 2594334 12317986 SFxv_2749 Shigella flexneri 2002017 hypothetical protein YP_005728136.1 2594005 D 591020 CDS YP_005728137.1 384544074 12317987 2594373..2594579 1 NC_017328.1 hypothetical protein 2594579 12317987 SFxv_2750 Shigella flexneri 2002017 hypothetical protein YP_005728137.1 2594373 D 591020 CDS YP_005728138.1 384544075 12317988 2594891..2595376 1 NC_017328.1 hypothetical protein 2595376 12317988 SFxv_2751 Shigella flexneri 2002017 hypothetical protein YP_005728138.1 2594891 D 591020 CDS YP_005728139.1 384544076 12317989 2595628..2597088 1 NC_017328.1 putative amino acid antiporter 2597088 12317989 SFxv_2752 Shigella flexneri 2002017 putative amino acid antiporter YP_005728139.1 2595628 D 591020 CDS YP_005728140.1 384544077 12317990 2597110..2597931 1 NC_017328.1 glutamate racemase 2597931 12317990 SFxv_2753 Shigella flexneri 2002017 glutamate racemase YP_005728140.1 2597110 D 591020 CDS YP_005728141.1 384544078 12317991 complement(2598050..2598745) 1 NC_017328.1 Iso-IS1 ORF2 2598745 12317991 SFxv_2755 Shigella flexneri 2002017 Iso-IS1 ORF2 YP_005728141.1 2598050 R 591020 CDS YP_005728142.1 384544079 12317992 complement(2599264..2600637) 1 NC_017328.1 Ethanolamine utilization protein EutA 2600637 eutQ 12317992 eutQ Shigella flexneri 2002017 Ethanolamine utilization protein EutA YP_005728142.1 2599264 R 591020 CDS YP_005728143.1 384544080 12317994 complement(2601103..2601510) 1 NC_017328.1 Ethanolamine utilization protein EutS 2601510 eutS 12317994 eutS Shigella flexneri 2002017 Ethanolamine utilization protein EutS YP_005728143.1 2601103 R 591020 CDS YP_005728144.1 384544081 12317995 complement(2601731..2604010) 1 NC_017328.1 putative multimodular enzyme 2604010 maeB 12317995 maeB Shigella flexneri 2002017 putative multimodular enzyme YP_005728144.1 2601731 R 591020 CDS YP_005728145.1 384544082 12317996 2604299..2605249 1 NC_017328.1 Transaldolase 2605249 talA 12317996 talA Shigella flexneri 2002017 Transaldolase YP_005728145.1 2604299 D 591020 CDS YP_005728146.1 384544083 12317997 2605269..2607272 1 NC_017328.1 Transketolase 2 isozyme 2607272 tktB 12317997 tktB Shigella flexneri 2002017 Transketolase 2 isozyme YP_005728146.1 2605269 D 591020 CDS YP_005728147.1 384544084 12317998 complement(2607375..2608418) 1 NC_017328.1 hypothetical protein 2608418 12317998 SFxv_2762 Shigella flexneri 2002017 hypothetical protein YP_005728147.1 2607375 R 591020 CDS YP_005728148.1 384544085 12317999 complement(2608544..2609119) 1 NC_017328.1 putative NTP pyrophosphohydrolases including oxidative damage repair enzyme 2609119 nudK 12317999 nudK Shigella flexneri 2002017 putative NTP pyrophosphohydrolases including oxidative damage repair enzyme YP_005728148.1 2608544 R 591020 CDS YP_005728149.1 384544086 12318000 complement(2609187..2611151) 1 NC_017328.1 putative oxidoreductase, Fe-S subunit 2611151 aegA 12318000 aegA Shigella flexneri 2002017 putative oxidoreductase, Fe-S subunit YP_005728149.1 2609187 R 591020 CDS YP_005728150.1 384544087 12318002 2613291..2616404 1 NC_017328.1 putative Cation/multidrug efflux pump 2616404 acrD 12318002 acrD Shigella flexneri 2002017 putative Cation/multidrug efflux pump YP_005728150.1 2613291 D 591020 CDS YP_005728151.1 384544088 12318003 2616943..2617299 1 NC_017328.1 ArsC family protein 2617299 yffB 12318003 yffB Shigella flexneri 2002017 ArsC family protein YP_005728151.1 2616943 D 591020 CDS YP_005728152.1 384544089 12318004 2617303..2618430 1 NC_017328.1 putative Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase-like deacylase 2618430 dapE 12318004 dapE Shigella flexneri 2002017 putative Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase-like deacylase YP_005728152.1 2617303 D 591020 CDS YP_005728153.1 384544090 12318005 complement(2618768..2619466) 1 NC_017328.1 phospholipase/carboxylesterase 2619466 ypfH 12318005 ypfH Shigella flexneri 2002017 phospholipase/carboxylesterase YP_005728153.1 2618768 R 591020 CDS YP_005728154.1 384544091 12318006 complement(2619540..2621555) 1 NC_017328.1 putative P-loop ATPase fused to an acetyltransferase 2621555 ypfI 12318006 ypfI Shigella flexneri 2002017 putative P-loop ATPase fused to an acetyltransferase YP_005728154.1 2619540 R 591020 CDS YP_005728155.1 384544092 12318007 complement(2621570..2622433) 1 NC_017328.1 hypothetical protein 2622433 12318007 SFxv_2772 Shigella flexneri 2002017 hypothetical protein YP_005728155.1 2621570 R 591020 CDS YP_005728156.1 384544093 12318008 complement(2622601..2623314) 1 NC_017328.1 Phosphoribosylaminoimidazole-succinocarboxamide synthase 2623314 purC 12318008 purC Shigella flexneri 2002017 Phosphoribosylaminoimidazole-succinocarboxamide synthase YP_005728156.1 2622601 R 591020 CDS YP_005728157.1 384544094 12318009 2623365..2623616 1 NC_017328.1 hypothetical protein 2623616 12318009 SFxv_2774 Shigella flexneri 2002017 hypothetical protein YP_005728157.1 2623365 D 591020 CDS YP_005728158.1 384544095 12318010 complement(2623527..2624564) 1 NC_017328.1 Lipoprotein-34 2624564 bamC 12318010 bamC Shigella flexneri 2002017 Lipoprotein-34 YP_005728158.1 2623527 R 591020 CDS YP_005728159.1 384544096 12318011 complement(2624578..2625456) 1 NC_017328.1 Dihydrodipicolinate synthase 2625456 dapA 12318011 dapA Shigella flexneri 2002017 Dihydrodipicolinate synthase YP_005728159.1 2624578 R 591020 CDS YP_005728160.1 384544097 12318012 2625602..2626174 1 NC_017328.1 Glycine cleavage system transcriptional repressor 2626174 gcvR 12318012 gcvR Shigella flexneri 2002017 Glycine cleavage system transcriptional repressor YP_005728160.1 2625602 D 591020 CDS YP_005728161.1 384544098 12318013 2626174..2626644 1 NC_017328.1 putative peroxiredoxin bcp 2626644 bcp 12318013 bcp Shigella flexneri 2002017 putative peroxiredoxin bcp YP_005728161.1 2626174 D 591020 CDS YP_005728162.1 384544099 12318014 2626858..2627514 1 NC_017328.1 Hydrogenase 4 Fe-S subunit 2627514 hyfA 12318014 hyfA Shigella flexneri 2002017 Hydrogenase 4 Fe-S subunit YP_005728162.1 2626858 D 591020 CDS YP_005728163.1 384544100 12318015 2628140..2629531 1 NC_017328.1 Hydrogenase 4 membrane subunit 2629531 hyfB 12318015 hyfB Shigella flexneri 2002017 Hydrogenase 4 membrane subunit YP_005728163.1 2628140 D 591020 CDS YP_005728164.1 384544101 12318016 2629521..2630489 1 NC_017328.1 Hydrogenase 4 membrane subunit 2630489 hyfC 12318016 hyfC Shigella flexneri 2002017 Hydrogenase 4 membrane subunit YP_005728164.1 2629521 D 591020 CDS YP_005728165.1 384544102 12318017 2630506..2631945 1 NC_017328.1 Hydrogenase 4 membrane subunit 2631945 hyfD 12318017 hyfD Shigella flexneri 2002017 Hydrogenase 4 membrane subunit YP_005728165.1 2630506 D 591020 CDS YP_005728166.1 384544103 12318018 2631957..2632607 1 NC_017328.1 Hydrogenase-4 component E 2632607 hyfE 12318018 hyfE Shigella flexneri 2002017 Hydrogenase-4 component E YP_005728166.1 2631957 D 591020 CDS YP_005728167.1 384544104 12318019 2632612..2634198 1 NC_017328.1 Hydrogenase 4 membrane subunit 2634198 hyfF 12318019 hyfF Shigella flexneri 2002017 Hydrogenase 4 membrane subunit YP_005728167.1 2632612 D 591020 CDS YP_005728168.1 384544105 12318021 2635912..2636457 1 NC_017328.1 Hydrogenase 4 Fe-S subunit 2636457 hyfH 12318021 hyfH Shigella flexneri 2002017 Hydrogenase 4 Fe-S subunit YP_005728168.1 2635912 D 591020 CDS YP_005728169.1 384544106 12318022 2636454..2637212 1 NC_017328.1 Hydrogenase 4 Fe-S subunit 2637212 hyfI 12318022 hyfI Shigella flexneri 2002017 Hydrogenase 4 Fe-S subunit YP_005728169.1 2636454 D 591020 CDS YP_005728170.1 384544107 12318023 2637142..2637618 1 NC_017328.1 putative protein processing element 2637618 hyfJ 12318023 hyfJ Shigella flexneri 2002017 putative protein processing element YP_005728170.1 2637142 D 591020 CDS YP_005728171.1 384544108 12318026 complement(2640704..2641765) 1 NC_017328.1 putative permease perM 2641765 yfgO 12318026 yfgO Shigella flexneri 2002017 putative permease perM YP_005728171.1 2640704 R 591020 CDS YP_005728172.1 384544109 12318027 2641978..2643441 1 NC_017328.1 putative Zn-dependent protease, contains TPR repeats 2643441 yfgC 12318027 yfgC Shigella flexneri 2002017 putative Zn-dependent protease, contains TPR repeats YP_005728172.1 2641978 D 591020 CDS YP_005728173.1 384544110 12318028 2643462..2643821 1 NC_017328.1 putative arsenate reductase 2643821 yfgD 12318028 yfgD Shigella flexneri 2002017 putative arsenate reductase YP_005728173.1 2643462 D 591020 CDS YP_005728174.1 384544111 12318029 complement(2643954..2644700) 1 NC_017328.1 DnaA-like protein hda 2644700 hda 12318029 hda Shigella flexneri 2002017 DnaA-like protein hda YP_005728174.1 2643954 R 591020 CDS YP_005728175.1 384544112 12318030 complement(2644750..2646039) 1 NC_017328.1 Uracil permease 2646039 uraA 12318030 uraA Shigella flexneri 2002017 Uracil permease YP_005728175.1 2644750 R 591020 CDS YP_005728176.1 384544113 12318031 complement(2646125..2646778) 1 NC_017328.1 uracil phosphoribosyltransferase 2646778 upp 12318031 upp Shigella flexneri 2002017 uracil phosphoribosyltransferase YP_005728176.1 2646125 R 591020 CDS YP_005728177.1 384544114 12318032 2647060..2648112 1 NC_017328.1 Phosphoribosylformylglycinamidine cyclo-ligase 2648112 purM 12318032 purM Shigella flexneri 2002017 Phosphoribosylformylglycinamidine cyclo-ligase YP_005728177.1 2647060 D 591020 CDS YP_005728178.1 384544115 12318033 2648112..2648750 1 NC_017328.1 Phosphoribosylglycinamide formyltransferase 1 2648750 purN 12318033 purN Shigella flexneri 2002017 Phosphoribosylglycinamide formyltransferase 1 YP_005728178.1 2648112 D 591020 CDS YP_005728179.1 384544116 12318034 2648922..2650988 1 NC_017328.1 polyphosphate kinase 2650988 ppk 12318034 ppk Shigella flexneri 2002017 polyphosphate kinase YP_005728179.1 2648922 D 591020 CDS YP_005728180.1 384544117 12318035 2650993..2652534 1 NC_017328.1 Exopolyphosphatase 2652534 ppx 12318035 ppx Shigella flexneri 2002017 Exopolyphosphatase YP_005728180.1 2650993 D 591020 CDS YP_005728181.1 384544118 12318037 2654086..2654904 1 NC_017328.1 IS600 orfB 2654904 12318037 SFxv_2802 Shigella flexneri 2002017 IS600 orfB YP_005728181.1 2654086 D 591020 CDS YP_005728182.1 384544119 12318038 complement(2656264..2656416) 1 NC_017328.1 hypothetical protein 2656416 12318038 SFxv_2804 Shigella flexneri 2002017 hypothetical protein YP_005728182.1 2656264 R 591020 CDS YP_005728183.1 384544120 12318039 2656434..2656625 1 NC_017328.1 putative inner membrane protein 2656625 yfgG 12318039 yfgG Shigella flexneri 2002017 putative inner membrane protein YP_005728183.1 2656434 D 591020 CDS YP_005728184.1 384544121 12318040 2656936..2657454 1 NC_017328.1 putative outer membrane lipoprotein 2657454 yfgH 12318040 yfgH Shigella flexneri 2002017 putative outer membrane lipoprotein YP_005728184.1 2656936 D 591020 CDS YP_005728185.1 384544122 12318041 2657470..2658009 1 NC_017328.1 hypothetical protein 2658009 12318041 SFxv_2807 Shigella flexneri 2002017 hypothetical protein YP_005728185.1 2657470 D 591020 CDS YP_005728186.1 384544123 12318042 complement(2658104..2659681) 1 NC_017328.1 GMP synthase 2659681 guaA 12318042 guaA Shigella flexneri 2002017 GMP synthase YP_005728186.1 2658104 R 591020 CDS YP_005728187.1 384544124 12318043 complement(2659750..2661222) 1 NC_017328.1 Inosine-5'-monophosphate dehydrogenase 2661222 guaB 12318043 guaB Shigella flexneri 2002017 Inosine-5'-monophosphate dehydrogenase YP_005728187.1 2659750 R 591020 CDS YP_005728188.1 384544125 12318044 2661378..2662748 1 NC_017328.1 exodeoxyribonuclease 7 large subunit 2662748 xseA 12318044 xseA Shigella flexneri 2002017 exodeoxyribonuclease 7 large subunit YP_005728188.1 2661378 D 591020 CDS YP_005728189.1 384544126 12318045 complement(2662745..2662996) 1 NC_017328.1 hypothetical protein 2662996 12318045 SFxv_2811 Shigella flexneri 2002017 hypothetical protein YP_005728189.1 2662745 R 591020 CDS YP_005728190.1 384544127 12318046 complement(2663030..2664502) 1 NC_017328.1 GTP-binding protein engA 2664502 der 12318046 der Shigella flexneri 2002017 GTP-binding protein engA YP_005728190.1 2663030 R 591020 CDS YP_005728191.1 384544128 12318047 complement(2664620..2665798) 1 NC_017328.1 putative dehydrogenase 2665798 bamB 12318047 bamB Shigella flexneri 2002017 putative dehydrogenase YP_005728191.1 2664620 R 591020 CDS YP_005728192.1 384544129 12318048 complement(2665809..2666429) 1 NC_017328.1 hypothetical protein 2666429 yfgM 12318048 yfgM Shigella flexneri 2002017 hypothetical protein YP_005728192.1 2665809 R 591020 CDS YP_005728193.1 384544130 12318049 complement(2666447..2667721) 1 NC_017328.1 histidyl-tRNA synthetase 2667721 hisS 12318049 hisS Shigella flexneri 2002017 histidyl-tRNA synthetase YP_005728193.1 2666447 R 591020 CDS YP_005728194.1 384544131 12318050 complement(2667824..2668951) 1 NC_017328.1 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 2668951 ispG 12318050 ispG Shigella flexneri 2002017 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_005728194.1 2667824 R 591020 CDS YP_005728195.1 384544132 12318051 complement(2668978..2669991) 1 NC_017328.1 hypothetical protein 2669991 yfgA 12318051 yfgA Shigella flexneri 2002017 hypothetical protein YP_005728195.1 2668978 R 591020 CDS YP_005728196.1 384544133 12318052 complement(2670276..2671298) 1 NC_017328.1 protein yfgB 2671298 rlmN 12318052 rlmN Shigella flexneri 2002017 protein yfgB YP_005728196.1 2670276 R 591020 CDS YP_005728197.1 384544134 12318053 complement(2671569..2672012) 1 NC_017328.1 nucleoside diphosphate kinase 2672012 ndk 12318053 ndk Shigella flexneri 2002017 nucleoside diphosphate kinase YP_005728197.1 2671569 R 591020 CDS YP_005728198.1 384544135 12318054 complement(2672161..2674275) 1 NC_017328.1 peptidoglycan synthetase; penicillin-binding protein 1B 2674275 pbpC 12318054 pbpC Shigella flexneri 2002017 peptidoglycan synthetase; penicillin-binding protein 1B YP_005728198.1 2672161 R 591020 CDS YP_005728199.1 384544136 12318055 complement(2674277..2675473) 1 NC_017328.1 ISSfl4 orf 2675473 12318055 SFxv_2821 Shigella flexneri 2002017 ISSfl4 orf YP_005728199.1 2674277 R 591020 CDS YP_005728200.1 384544137 12318056 2675799..2676185 1 NC_017328.1 putative thiosulfate sulfurtransferase 2676185 sseA 12318056 sseA Shigella flexneri 2002017 putative thiosulfate sulfurtransferase YP_005728200.1 2675799 D 591020 CDS YP_005728201.1 384544138 12318057 2676854..2676979 1 NC_017328.1 hypothetical protein 2676979 12318057 SFxv_2824 Shigella flexneri 2002017 hypothetical protein YP_005728201.1 2676854 D 591020 CDS YP_005728202.1 384544139 12318058 complement(2677011..2677796) 1 NC_017328.1 Enhanced serine sensitivity 2677796 sseB 12318058 sseB Shigella flexneri 2002017 Enhanced serine sensitivity YP_005728202.1 2677011 R 591020 CDS YP_005728203.1 384544140 12318059 complement(2677929..2679212) 1 NC_017328.1 Peptidase B 2679212 pepB 12318059 pepB Shigella flexneri 2002017 Peptidase B YP_005728203.1 2677929 R 591020 CDS YP_005728204.1 384544141 12318060 complement(2679271..2679471) 1 NC_017328.1 Protein iscX 2679471 iscX 12318060 iscX Shigella flexneri 2002017 Protein iscX YP_005728204.1 2679271 R 591020 CDS YP_005728205.1 384544142 12318061 complement(2679483..2679818) 1 NC_017328.1 2Fe-2S ferredoxin 2679818 fdx 12318061 fdx Shigella flexneri 2002017 2Fe-2S ferredoxin YP_005728205.1 2679483 R 591020 CDS YP_005728206.1 384544143 12318062 complement(2679820..2681670) 1 NC_017328.1 hscA-like chaperone protein 2681670 hscA 12318062 hscA Shigella flexneri 2002017 hscA-like chaperone protein YP_005728206.1 2679820 R 591020 CDS YP_005728207.1 384544144 12318063 complement(2681687..2682202) 1 NC_017328.1 Co-chaperone protein hscB 2682202 hscB 12318063 hscB Shigella flexneri 2002017 Co-chaperone protein hscB YP_005728207.1 2681687 R 591020 CDS YP_005728208.1 384544145 12318064 complement(2682298..2682627) 1 NC_017328.1 Iron-binding protein iscA 2682627 iscA 12318064 iscA Shigella flexneri 2002017 Iron-binding protein iscA YP_005728208.1 2682298 R 591020 CDS YP_005728209.1 384544146 12318065 complement(2682638..2683024) 1 NC_017328.1 NifU-like protein 2683024 iscU 12318065 iscU Shigella flexneri 2002017 NifU-like protein YP_005728209.1 2682638 R 591020 CDS YP_005728210.1 384544147 12318066 complement(2683052..2684290) 1 NC_017328.1 putative Cysteine sulfinate desulfinase/cysteine desulfurase-like enzyme 2684290 iscS 12318066 iscS Shigella flexneri 2002017 putative Cysteine sulfinate desulfinase/cysteine desulfurase-like enzyme YP_005728210.1 2683052 R 591020 CDS YP_005728211.1 384544148 12318067 complement(2684378..2684866) 1 NC_017328.1 HTH-type transcriptional regulator iscR 2684866 iscR 12318067 iscR Shigella flexneri 2002017 HTH-type transcriptional regulator iscR YP_005728211.1 2684378 R 591020 CDS YP_005728212.1 384544149 12318068 complement(2685136..2685876) 1 NC_017328.1 tRNA (cytidine/uridine-2'-O-)-methyltransferase trmJ 2685876 trmJ 12318068 trmJ Shigella flexneri 2002017 tRNA (cytidine/uridine-2'-O-)-methyltransferase trmJ YP_005728212.1 2685136 R 591020 CDS YP_005728213.1 384544150 12318069 2685995..2686798 1 NC_017328.1 Inositol-1-monophosphatase 2686798 suhB 12318069 suhB Shigella flexneri 2002017 Inositol-1-monophosphatase YP_005728213.1 2685995 D 591020 CDS YP_005728214.1 384544151 12318070 2686916..2687797 1 NC_017328.1 hypothetical protein 2687797 12318070 SFxv_2837 Shigella flexneri 2002017 hypothetical protein YP_005728214.1 2686916 D 591020 CDS YP_005728215.1 384544152 12318071 2687988..2689268 1 NC_017328.1 Stationary phase-inducible protein csiE 2689268 csiE 12318071 csiE Shigella flexneri 2002017 Stationary phase-inducible protein csiE YP_005728215.1 2687988 D 591020 CDS YP_005728216.1 384544153 12318072 complement(2689260..2690267) 1 NC_017328.1 MFS (Major facilitator superfamily) transporter 2690267 hcaT 12318072 hcaT Shigella flexneri 2002017 MFS (Major facilitator superfamily) transporter YP_005728216.1 2689260 R 591020 CDS YP_005728217.1 384544154 12318073 complement(2690559..2691449) 1 NC_017328.1 Transcriptional activator of hca cluster 2691449 hcaR 12318073 hcaR Shigella flexneri 2002017 Transcriptional activator of hca cluster YP_005728217.1 2690559 R 591020 CDS YP_005728218.1 384544155 12318074 2691585..2692946 1 NC_017328.1 Large terminal subunit of phenylpropionate dioxygenase 2692946 hcaE 12318074 hcaE Shigella flexneri 2002017 Large terminal subunit of phenylpropionate dioxygenase YP_005728218.1 2691585 D 591020 CDS YP_005728219.1 384544156 12318075 2692943..2693461 1 NC_017328.1 Small terminal subunit of phenylpropionate dioxygenase 2693461 hcaF 12318075 hcaF Shigella flexneri 2002017 Small terminal subunit of phenylpropionate dioxygenase YP_005728219.1 2692943 D 591020 CDS YP_005728220.1 384544157 12318076 2693461..2693781 1 NC_017328.1 putative Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenase 2693781 hcaC 12318076 hcaC Shigella flexneri 2002017 putative Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenase YP_005728220.1 2693461 D 591020 CDS YP_005728221.1 384544158 12318077 2693778..2694590 1 NC_017328.1 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase 2694590 hcaB 12318077 hcaB Shigella flexneri 2002017 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase YP_005728221.1 2693778 D 591020 CDS YP_005728222.1 384544159 12318078 2694600..2695817 1 NC_017328.1 Digoxigenin system ferredoxin--NAD(+) reductase component 2695817 hcaD 12318078 hcaD Shigella flexneri 2002017 Digoxigenin system ferredoxin--NAD(+) reductase component YP_005728222.1 2694600 D 591020 CDS YP_005728223.1 384544160 12318080 complement(2696385..2697257) 1 NC_017328.1 hypothetical protein 2697257 12318080 SFxv_2847 Shigella flexneri 2002017 hypothetical protein YP_005728223.1 2696385 R 591020 CDS YP_005728224.1 384544161 12318081 complement(2697269..2698363) 1 NC_017328.1 putative oxidoreductase 2698363 yphC 12318081 yphC Shigella flexneri 2002017 putative oxidoreductase YP_005728224.1 2697269 R 591020 CDS YP_005728225.1 384544162 12318082 complement(2698396..2699394) 1 NC_017328.1 putative Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 2699394 yphD 12318082 yphD Shigella flexneri 2002017 putative Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components YP_005728225.1 2698396 R 591020 CDS YP_005728226.1 384544163 12318083 complement(2699419..2700930) 1 NC_017328.1 ATPase 2700930 yphE 12318083 yphE Shigella flexneri 2002017 ATPase YP_005728226.1 2699419 R 591020 CDS YP_005728227.1 384544164 12318086 2705425..2706624 1 NC_017328.1 putative NAGC-like transcriptional regulator 2706624 yphH 12318086 yphH Shigella flexneri 2002017 putative NAGC-like transcriptional regulator YP_005728227.1 2705425 D 591020 CDS YP_005728228.1 384544165 12318087 complement(2706822..2708075) 1 NC_017328.1 Serine hydroxymethyltransferase 2708075 glyA 12318087 glyA Shigella flexneri 2002017 Serine hydroxymethyltransferase YP_005728228.1 2706822 R 591020 CDS YP_005728229.1 384544166 12318088 2708402..2709592 1 NC_017328.1 putative Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 2709592 hmp 12318088 hmp Shigella flexneri 2002017 putative Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 YP_005728229.1 2708402 D 591020 CDS YP_005728230.1 384544167 12318089 complement(2709637..2709975) 1 NC_017328.1 Nitrogen regulatory protein P-II 1 2709975 glnB 12318089 glnB Shigella flexneri 2002017 Nitrogen regulatory protein P-II 1 YP_005728230.1 2709637 R 591020 CDS YP_005728231.1 384544168 12318090 complement(2710036..2711370) 1 NC_017328.1 putative 2-component transcriptional regulator 2711370 yfhA 12318090 yfhA Shigella flexneri 2002017 putative 2-component transcriptional regulator YP_005728231.1 2710036 R 591020 CDS YP_005728232.1 384544169 12318091 complement(2711360..2712079) 1 NC_017328.1 putative lipoprotein 2712079 yfhG 12318091 yfhG Shigella flexneri 2002017 putative lipoprotein YP_005728232.1 2711360 R 591020 CDS YP_005728233.1 384544170 12318092 complement(2712238..2713728) 1 NC_017328.1 putative Sensor protein 2713728 yfhK 12318092 yfhK Shigella flexneri 2002017 putative Sensor protein YP_005728233.1 2712238 R 591020 CDS YP_005728234.1 384544171 12318093 complement(2714223..2718266) 1 NC_017328.1 Phosphoribosylformyl-glycineamide synthetase, FGAM synthetase 2718266 purL 12318093 purL Shigella flexneri 2002017 Phosphoribosylformyl-glycineamide synthetase, FGAM synthetase YP_005728234.1 2714223 R 591020 CDS YP_005728235.1 384544172 12318094 2718369..2719925 1 NC_017328.1 Lytic transglycosylase, catalytic precursor 2719925 yfhD 12318094 yfhD Shigella flexneri 2002017 Lytic transglycosylase, catalytic precursor YP_005728235.1 2718369 D 591020 CDS YP_005728236.1 384544173 12318095 complement(2719922..2720458) 1 NC_017328.1 tRNA-specific adenosine deaminase 2720458 tadA 12318095 tadA Shigella flexneri 2002017 tRNA-specific adenosine deaminase YP_005728236.1 2719922 R 591020 CDS YP_005728237.1 384544174 12318096 complement(2720483..2721118) 1 NC_017328.1 putative Phosphoserine phosphatase 2721118 yfhB 12318096 yfhB Shigella flexneri 2002017 putative Phosphoserine phosphatase YP_005728237.1 2720483 R 591020 CDS YP_005728238.1 384544175 12318097 2721255..2722175 1 NC_017328.1 putative DNA-binding transcriptional regulator 2722175 yfhH 12318097 yfhH Shigella flexneri 2002017 putative DNA-binding transcriptional regulator YP_005728238.1 2721255 D 591020 CDS YP_005728239.1 384544176 12318098 complement(2722628..2723068) 1 NC_017328.1 putative Site-specific recombinase, DNA invertase 2723068 12318098 SFxv_2866 Shigella flexneri 2002017 putative Site-specific recombinase, DNA invertase YP_005728239.1 2722628 R 591020 CDS YP_005728240.1 384544177 12318099 2723559..2725385 1 NC_017328.1 Invasion plasmid antigen 2725385 12318099 SFxv_2867 Shigella flexneri 2002017 Invasion plasmid antigen YP_005728240.1 2723559 D 591020 CDS YP_005728241.1 384544178 12318100 complement(2726140..2727360) 1 NC_017328.1 putative tail fiber protein 2727360 12318100 SFxv_2869 Shigella flexneri 2002017 putative tail fiber protein YP_005728241.1 2726140 R 591020 CDS YP_005728242.1 384544179 12318101 complement(2727432..2727977) 1 NC_017328.1 putative tail fiber assembly protein 2727977 12318101 SFxv_2870 Shigella flexneri 2002017 putative tail fiber assembly protein YP_005728242.1 2727432 R 591020 CDS YP_005728243.1 384544180 12318102 complement(2727980..2728498) 1 NC_017328.1 hypothetical protein 2728498 12318102 SFxv_2871 Shigella flexneri 2002017 hypothetical protein YP_005728243.1 2727980 R 591020 CDS YP_005728244.1 384544181 12318103 2728562..2728927 1 NC_017328.1 IS2 ORF1 2728927 12318103 SFxv_2872 Shigella flexneri 2002017 IS2 ORF1 YP_005728244.1 2728562 D 591020 CDS YP_005728245.1 384544182 12318104 2728885..2729790 1 NC_017328.1 IS2 ORF2 2729790 12318104 SFxv_2873 Shigella flexneri 2002017 IS2 ORF2 YP_005728245.1 2728885 D 591020 CDS YP_005728246.1 384544183 12318105 complement(2728930..2729361) 1 NC_017328.1 Insertion element IS2 protein 2729361 12318105 SFxv_2875 Shigella flexneri 2002017 Insertion element IS2 protein YP_005728246.1 2728930 R 591020 CDS YP_005728247.1 384544184 12318106 complement(2729715..2730701) 1 NC_017328.1 putative tail fiber protein 2730701 12318106 SFxv_2876 Shigella flexneri 2002017 putative tail fiber protein YP_005728247.1 2729715 R 591020 CDS YP_005728248.1 384544185 12318107 complement(2730688..2731293) 1 NC_017328.1 hypothetical protein 2731293 12318107 SFxv_2877 Shigella flexneri 2002017 hypothetical protein YP_005728248.1 2730688 R 591020 CDS YP_005728249.1 384544186 12318108 complement(2731295..2731762) 1 NC_017328.1 phage Mu-like protein 2731762 12318108 SFxv_2878 Shigella flexneri 2002017 phage Mu-like protein YP_005728249.1 2731295 R 591020 CDS YP_005728250.1 384544187 12318109 2732395..2733213 1 NC_017328.1 IS600 orfB 2733213 12318109 SFxv_2879 Shigella flexneri 2002017 IS600 orfB YP_005728250.1 2732395 D 591020 CDS YP_005728251.1 384544188 12318110 complement(2733254..2733910) 1 NC_017328.1 putative Integrase 2733910 12318110 SFxv_2880 Shigella flexneri 2002017 putative Integrase YP_005728251.1 2733254 R 591020 CDS YP_005728252.1 384544189 12318111 2734568..2734828 1 NC_017328.1 putative ferredoxin-like protein yfhL 2734828 yfhL 12318111 yfhL Shigella flexneri 2002017 putative ferredoxin-like protein yfhL YP_005728252.1 2734568 D 591020 CDS YP_005728253.1 384544190 12318112 complement(2735522..2735902) 1 NC_017328.1 Holo-[acyl-carrier-protein] synthase 2735902 acpS 12318112 acpS Shigella flexneri 2002017 Holo-[acyl-carrier-protein] synthase YP_005728253.1 2735522 R 591020 CDS YP_005728254.1 384544191 12318113 complement(2735902..2736633) 1 NC_017328.1 pyridoxine 5'-phosphate synthase 2736633 pdxJ 12318113 pdxJ Shigella flexneri 2002017 pyridoxine 5'-phosphate synthase YP_005728254.1 2735902 R 591020 CDS YP_005728255.1 384544192 12318114 complement(2736645..2737373) 1 NC_017328.1 DNA repair protein recO 2737373 recO 12318114 recO Shigella flexneri 2002017 DNA repair protein recO YP_005728255.1 2736645 R 591020 CDS YP_005728256.1 384544193 12318115 complement(2737385..2738290) 1 NC_017328.1 era-like GTP-binding protein 2738290 era 12318115 era Shigella flexneri 2002017 era-like GTP-binding protein YP_005728256.1 2737385 R 591020 CDS YP_005728257.1 384544194 12318116 complement(2738287..2738967) 1 NC_017328.1 ribonuclease 3 2738967 rnc 12318116 rnc Shigella flexneri 2002017 ribonuclease 3 YP_005728257.1 2738287 R 591020 CDS YP_005728258.1 384544195 12318117 complement(2739239..2740213) 1 NC_017328.1 Signal peptidase I 2740213 lepB 12318117 lepB Shigella flexneri 2002017 Signal peptidase I YP_005728258.1 2739239 R 591020 CDS YP_005728259.1 384544196 12318118 complement(2740229..2742028) 1 NC_017328.1 GTP-binding protein lepA 2742028 lepA 12318118 lepA Shigella flexneri 2002017 GTP-binding protein lepA YP_005728259.1 2740229 R 591020 CDS YP_005728260.1 384544197 12318119 complement(2742226..2742705) 1 NC_017328.1 Sigma-E factor, negative regulatory protein 2742705 rseC 12318119 rseC Shigella flexneri 2002017 Sigma-E factor, negative regulatory protein YP_005728260.1 2742226 R 591020 CDS YP_005728261.1 384544198 12318120 complement(2742702..2743658) 1 NC_017328.1 putative Negative regulator of sigma E activity 2743658 rseB 12318120 rseB Shigella flexneri 2002017 putative Negative regulator of sigma E activity YP_005728261.1 2742702 R 591020 CDS YP_005728262.1 384544199 12318121 complement(2743658..2744308) 1 NC_017328.1 sigma-E factor negative regulatory protein 2744308 rseA 12318121 rseA Shigella flexneri 2002017 sigma-E factor negative regulatory protein YP_005728262.1 2743658 R 591020 CDS YP_005728263.1 384544200 12318122 complement(2744341..2744916) 1 NC_017328.1 putative DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein 2744916 rpoE 12318122 rpoE Shigella flexneri 2002017 putative DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein YP_005728263.1 2744341 R 591020 CDS YP_005728264.1 384544201 12318124 complement(2746931..2747788) 1 NC_017328.1 hypothetical protein 2747788 12318124 SFxv_2894 Shigella flexneri 2002017 hypothetical protein YP_005728264.1 2746931 R 591020 CDS YP_005728265.1 384544202 12318125 2747800..2749134 1 NC_017328.1 ATP-dependent RNA helicase 2749134 srmB 12318125 srmB Shigella flexneri 2002017 ATP-dependent RNA helicase YP_005728265.1 2747800 D 591020 CDS YP_005728266.1 384544203 12318126 complement(2749169..2750095) 1 NC_017328.1 putative LYSR-type transcriptional regulator 2750095 yfiE 12318126 yfiE Shigella flexneri 2002017 putative LYSR-type transcriptional regulator YP_005728266.1 2749169 R 591020 CDS YP_005728267.1 384544204 12318127 2750303..2750740 1 NC_017328.1 putative threonine efflux protein 2750740 eamB 12318127 eamB Shigella flexneri 2002017 putative threonine efflux protein YP_005728267.1 2750303 D 591020 CDS YP_005728268.1 384544205 12318128 complement(2750796..2751179) 1 NC_017328.1 autonomous glycyl radical cofactor 2751179 yfiD 12318128 yfiD Shigella flexneri 2002017 autonomous glycyl radical cofactor YP_005728268.1 2750796 R 591020 CDS YP_005728269.1 384544206 12318129 2751484..2752173 1 NC_017328.1 uracil-DNA glycosylase 2752173 ung 12318129 ung Shigella flexneri 2002017 uracil-DNA glycosylase YP_005728269.1 2751484 D 591020 CDS YP_005728270.1 384544207 12318130 complement(2752221..2753258) 1 NC_017328.1 putative rRNA methylase 2753258 yfiF 12318130 yfiF Shigella flexneri 2002017 putative rRNA methylase YP_005728270.1 2752221 R 591020 CDS YP_005728271.1 384544208 12318131 2753465..2753884 1 NC_017328.1 Thioredoxin-2 2753884 trxC 12318131 trxC Shigella flexneri 2002017 Thioredoxin-2 YP_005728271.1 2753465 D 591020 CDS YP_005728272.1 384544209 12318132 2753902..2754651 1 NC_017328.1 DTW domain protein 2754651 yfiP 12318132 yfiP Shigella flexneri 2002017 DTW domain protein YP_005728272.1 2753902 D 591020 CDS YP_005728273.1 384544210 12318133 2754683..2757343 1 NC_017328.1 putative Acyl-CoA synthetase (NDP forming) 2757343 yfiQ 12318133 yfiQ Shigella flexneri 2002017 putative Acyl-CoA synthetase (NDP forming) YP_005728273.1 2754683 D 591020 CDS YP_005728274.1 384544211 12318134 2757454..2758812 1 NC_017328.1 CDP-diacylglycerol--serine O-phosphatidyltransferase 2758812 pssA 12318134 pssA Shigella flexneri 2002017 CDP-diacylglycerol--serine O-phosphatidyltransferase YP_005728274.1 2757454 D 591020 CDS YP_005728275.1 384544212 12318135 2758858..2759181 1 NC_017328.1 putative lipoprotein 2759181 yfiM 12318135 yfiM Shigella flexneri 2002017 putative lipoprotein YP_005728275.1 2758858 D 591020 CDS YP_005728276.1 384544213 12318136 complement(2759178..2760476) 1 NC_017328.1 Alpha-ketoglutarate permease 2760476 kgtP 12318136 kgtP Shigella flexneri 2002017 Alpha-ketoglutarate permease YP_005728276.1 2759178 R 591020 CDS YP_005728277.1 384544214 12318141 2766732..2768189 1 NC_017328.1 IS4 ORF 2768189 12318141 SFxv_2909 Shigella flexneri 2002017 IS4 ORF YP_005728277.1 2766732 D 591020 CDS YP_005728278.1 384544215 12318142 complement(2767710..2768447) 1 NC_017328.1 putative lipoprotein 2768447 bamD 12318142 bamD Shigella flexneri 2002017 putative lipoprotein YP_005728278.1 2767710 R 591020 CDS YP_005728279.1 384544216 12318143 2768582..2769562 1 NC_017328.1 Ribosomal large subunit pseudouridine synthase D 2769562 rluD 12318143 rluD Shigella flexneri 2002017 Ribosomal large subunit pseudouridine synthase D YP_005728279.1 2768582 D 591020 CDS YP_005728280.1 384544217 12318144 2769559..2770290 1 NC_017328.1 hypothetical protein 2770290 yfiH 12318144 yfiH Shigella flexneri 2002017 hypothetical protein YP_005728280.1 2769559 D 591020 CDS YP_005728281.1 384544218 12318145 2770420..2772993 1 NC_017328.1 Chaperone protein clpB 2772993 clpB 12318145 clpB Shigella flexneri 2002017 Chaperone protein clpB YP_005728281.1 2770420 D 591020 CDS YP_005728282.1 384544219 12318146 complement(2773030..2774040) 1 NC_017328.1 IS4 orf 2774040 12318146 SFxv_2914 Shigella flexneri 2002017 IS4 orf YP_005728282.1 2773030 R 591020 CDS YP_005728283.1 384544220 12318147 2774448..2774654 1 NC_017328.1 hypothetical protein 2774654 12318147 SFxv_2915 Shigella flexneri 2002017 hypothetical protein YP_005728283.1 2774448 D 591020 CDS YP_005728284.1 384544221 12318148 2774689..2775030 1 NC_017328.1 Ribosome-associated inhibitor A 2775030 raiA 12318148 raiA Shigella flexneri 2002017 Ribosome-associated inhibitor A YP_005728284.1 2774689 D 591020 CDS YP_005728285.1 384544222 12318149 2775280..2776440 1 NC_017328.1 bifunctional chorismate mutase/prephenate dehydratase 2776440 pheA 12318149 pheA Shigella flexneri 2002017 bifunctional chorismate mutase/prephenate dehydratase YP_005728285.1 2775280 D 591020 CDS YP_005728286.1 384544223 12318150 complement(2776483..2777604) 1 NC_017328.1 Chorismate mutase-T and prephenate dehydrogenase 2777604 tyrA 12318150 tyrA Shigella flexneri 2002017 Chorismate mutase-T and prephenate dehydrogenase YP_005728286.1 2776483 R 591020 CDS YP_005728287.1 384544224 12318151 complement(2777615..2778685) 1 NC_017328.1 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase 2778685 aroF 12318151 aroF Shigella flexneri 2002017 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase YP_005728287.1 2777615 R 591020 CDS YP_005728288.1 384544225 12318152 2778877..2779260 1 NC_017328.1 putative excinuclease ATPase subunit 2779260 yfiL 12318152 yfiL Shigella flexneri 2002017 putative excinuclease ATPase subunit YP_005728288.1 2778877 D 591020 CDS YP_005728289.1 384544226 12318153 2779410..2779928 1 NC_017328.1 hypothetical protein 2779928 12318153 SFxv_2921 Shigella flexneri 2002017 hypothetical protein YP_005728289.1 2779410 D 591020 CDS YP_005728290.1 384544227 12318154 2780457..2781143 1 NC_017328.1 Inner membrane protein yfiN 2781143 yfiN 12318154 yfiN Shigella flexneri 2002017 Inner membrane protein yfiN YP_005728290.1 2780457 D 591020 CDS YP_005728291.1 384544228 12318155 2781159..2781641 1 NC_017328.1 putative outer membrane protein 2781641 yfiB 12318155 yfiB Shigella flexneri 2002017 putative outer membrane protein YP_005728291.1 2781159 D 591020 CDS YP_005728292.1 384544229 12318156 complement(2781718..2782065) 1 NC_017328.1 50S ribosomal protein L19 2782065 rplS 12318156 rplS Shigella flexneri 2002017 50S ribosomal protein L19 YP_005728292.1 2781718 R 591020 CDS YP_005728293.1 384544230 12318157 complement(2782107..2782874) 1 NC_017328.1 tRNA (guanine-N(1)-)-methyltransferase 2782874 trmD 12318157 trmD Shigella flexneri 2002017 tRNA (guanine-N(1)-)-methyltransferase YP_005728293.1 2782107 R 591020 CDS YP_005728294.1 384544231 12318158 complement(2782905..2783399) 1 NC_017328.1 16S rRNA-processing protein rimM 2783399 rimM 12318158 rimM Shigella flexneri 2002017 16S rRNA-processing protein rimM YP_005728294.1 2782905 R 591020 CDS YP_005728295.1 384544232 12318159 complement(2783471..2783779) 1 NC_017328.1 30S ribosomal protein S16 2783779 rpsP 12318159 rpsP Shigella flexneri 2002017 30S ribosomal protein S16 YP_005728295.1 2783471 R 591020 CDS YP_005728296.1 384544233 12318160 complement(2783856..2785217) 1 NC_017328.1 GTP-binding export factor binds to signal sequence, GTP and RNA 2785217 ffh 12318160 ffh Shigella flexneri 2002017 GTP-binding export factor binds to signal sequence, GTP and RNA YP_005728296.1 2783856 R 591020 CDS YP_005728297.1 384544234 12318161 2785309..2786175 1 NC_017328.1 Inner membrane protein ypjD 2786175 ypjD 12318161 ypjD Shigella flexneri 2002017 Inner membrane protein ypjD YP_005728297.1 2785309 D 591020 CDS YP_005728298.1 384544235 12318162 2786220..2787482 1 NC_017328.1 putative CBS domain-containing protein 2787482 yfjD 12318162 yfjD Shigella flexneri 2002017 putative CBS domain-containing protein YP_005728298.1 2786220 D 591020 CDS YP_005728299.1 384544236 12318163 complement(2787537..2788130) 1 NC_017328.1 protein grpE 2788130 grpE 12318163 grpE Shigella flexneri 2002017 protein grpE YP_005728299.1 2787537 R 591020 CDS YP_005728300.1 384544237 12318164 2788095..2788256 1 NC_017328.1 hypothetical protein 2788256 12318164 SFxv_2931 Shigella flexneri 2002017 hypothetical protein YP_005728300.1 2788095 D 591020 CDS YP_005728301.1 384544238 12318165 2788253..2789131 1 NC_017328.1 putative inorganic polyphosphate/ATP-NAD kinase 2789131 nadK 12318165 nadK Shigella flexneri 2002017 putative inorganic polyphosphate/ATP-NAD kinase YP_005728301.1 2788253 D 591020 CDS YP_005728302.1 384544239 12318166 2789217..2790878 1 NC_017328.1 DNA repair protein RecN 2790878 recN 12318166 recN Shigella flexneri 2002017 DNA repair protein RecN YP_005728302.1 2789217 D 591020 CDS YP_005728303.1 384544240 12318167 2791027..2791368 1 NC_017328.1 Small protein A 2791368 smpA 12318167 smpA Shigella flexneri 2002017 Small protein A YP_005728303.1 2791027 D 591020 CDS YP_005728304.1 384544241 12318168 complement(2791430..2791804) 1 NC_017328.1 hypothetical protein 2791804 12318168 SFxv_2936 Shigella flexneri 2002017 hypothetical protein YP_005728304.1 2791430 R 591020 CDS YP_005728305.1 384544242 12318169 complement(2791710..2792186) 1 NC_017328.1 hypothetical protein 2792186 yfjG 12318169 yfjG Shigella flexneri 2002017 hypothetical protein YP_005728305.1 2791710 R 591020 CDS YP_005728306.1 384544243 12318170 2792318..2792800 1 NC_017328.1 SsrA-binding protein 2792800 smpB 12318170 smpB Shigella flexneri 2002017 SsrA-binding protein YP_005728306.1 2792318 D 591020 CDS YP_005728307.1 384544244 12318171 2793582..2794823 1 NC_017328.1 putative CP4-57-type integrase 2794823 intA 12318171 intA Shigella flexneri 2002017 putative CP4-57-type integrase YP_005728307.1 2793582 D 591020 CDS YP_005728308.1 384544245 12318172 2795325..2795720 1 NC_017328.1 IS1 transposase 2795720 12318172 SFxv_2940 Shigella flexneri 2002017 IS1 transposase YP_005728308.1 2795325 D 591020 CDS YP_005728309.1 384544246 12318173 2795830..2796138 1 NC_017328.1 putative transposase 2796138 12318173 SFxv_2941 Shigella flexneri 2002017 putative transposase YP_005728309.1 2795830 D 591020 CDS YP_005728310.1 384544247 12318174 2796135..2797001 1 NC_017328.1 IS3 ORF2 2797001 12318174 SFxv_2942 Shigella flexneri 2002017 IS3 ORF2 YP_005728310.1 2796135 D 591020 CDS YP_005728311.1 384544248 12318176 2797883..2800135 1 NC_017328.1 alpha amylase 2800135 12318176 SFxv_2944 Shigella flexneri 2002017 alpha amylase YP_005728311.1 2797883 D 591020 CDS YP_005728312.1 384544249 12318177 2800366..2801403 1 NC_017328.1 hypothetical protein 2801403 csiD 12318177 csiD Shigella flexneri 2002017 hypothetical protein YP_005728312.1 2800366 D 591020 CDS YP_005728313.1 384544250 12318178 2801357..2802691 1 NC_017328.1 FAD-dependent oxidoreductase 2802691 ygaF 12318178 ygaF Shigella flexneri 2002017 FAD-dependent oxidoreductase YP_005728313.1 2801357 D 591020 CDS YP_005728314.1 384544251 12318180 2804329..2805456 1 NC_017328.1 4-aminobutyrate aminotransferase 2805456 gabT 12318180 gabT Shigella flexneri 2002017 4-aminobutyrate aminotransferase YP_005728314.1 2804329 D 591020 CDS YP_005728315.1 384544252 12318181 2805694..2807094 1 NC_017328.1 Transport permease protein of gamma-aminobutyrate 2807094 gabP 12318181 gabP Shigella flexneri 2002017 Transport permease protein of gamma-aminobutyrate YP_005728315.1 2805694 D 591020 CDS YP_005728316.1 384544253 12318182 2807115..2807777 1 NC_017328.1 putative transcriptional regulator 2807777 csiR 12318182 csiR Shigella flexneri 2002017 putative transcriptional regulator YP_005728316.1 2807115 D 591020 CDS YP_005728317.1 384544254 12318183 complement(2807778..2808227) 1 NC_017328.1 phospholipid-binding protein 2808227 ygaU 12318183 ygaU Shigella flexneri 2002017 phospholipid-binding protein YP_005728317.1 2807778 R 591020 CDS YP_005728318.1 384544255 12318184 complement(2808311..2808469) 1 NC_017328.1 membrane protein yqaE 2808469 yqaE 12318184 yqaE Shigella flexneri 2002017 membrane protein yqaE YP_005728318.1 2808311 R 591020 CDS YP_005728319.1 384544256 12318186 2809099..2809431 1 NC_017328.1 putative IS2 ORF 2809431 12318186 SFxv_2953 Shigella flexneri 2002017 putative IS2 ORF YP_005728319.1 2809099 D 591020 CDS YP_005728320.1 384544257 12318187 complement(2809434..2809799) 1 NC_017328.1 IS2 ORF1 2809799 12318187 SFxv_2956 Shigella flexneri 2002017 IS2 ORF1 YP_005728320.1 2809434 R 591020 CDS YP_005728321.1 384544258 12318188 2809989..2810288 1 NC_017328.1 putative transcriptional regulator 2810288 ygaV 12318188 ygaV Shigella flexneri 2002017 putative transcriptional regulator YP_005728321.1 2809989 D 591020 CDS YP_005728322.1 384544259 12318189 2810298..2810822 1 NC_017328.1 putative inner membrane protein 2810822 ygaP 12318189 ygaP Shigella flexneri 2002017 putative inner membrane protein YP_005728322.1 2810298 D 591020 CDS YP_005728323.1 384544260 12318190 complement(2810869..2811273) 1 NC_017328.1 putative DNA-binding protein H-NS 2811273 stpA 12318190 stpA Shigella flexneri 2002017 putative DNA-binding protein H-NS YP_005728323.1 2810869 R 591020 CDS YP_005728324.1 384544261 12318191 2811941..2812390 1 NC_017328.1 hypothetical protein 2812390 12318191 SFxv_2960 Shigella flexneri 2002017 hypothetical protein YP_005728324.1 2811941 D 591020 CDS YP_005728325.1 384544262 12318192 complement(2812427..2812771) 1 NC_017328.1 hypothetical protein 2812771 12318192 SFxv_2961 Shigella flexneri 2002017 hypothetical protein YP_005728325.1 2812427 R 591020 CDS YP_005728326.1 384544263 12318194 2813500..2813745 1 NC_017328.1 Glutaredoxin-like protein nrdH 2813745 nrdH 12318194 nrdH Shigella flexneri 2002017 Glutaredoxin-like protein nrdH YP_005728326.1 2813500 D 591020 CDS YP_005728327.1 384544264 12318195 2813742..2814152 1 NC_017328.1 Protein nrdI 2814152 nrdI 12318195 nrdI Shigella flexneri 2002017 Protein nrdI YP_005728327.1 2813742 D 591020 CDS YP_005728328.1 384544265 12318196 2814125..2816269 1 NC_017328.1 ribonucleoside-diphosphate reductase 2816269 nrdE 12318196 nrdE Shigella flexneri 2002017 ribonucleoside-diphosphate reductase YP_005728328.1 2814125 D 591020 CDS YP_005728329.1 384544266 12318197 2816279..2817238 1 NC_017328.1 Ribonucleoside-diphosphate reductase 2, beta chain 2817238 nrdF 12318197 nrdF Shigella flexneri 2002017 Ribonucleoside-diphosphate reductase 2, beta chain YP_005728329.1 2816279 D 591020 CDS YP_005728330.1 384544267 12318198 2817392..2818795 1 NC_017328.1 Glycine betaine/L-proline transport ATP-binding protein 2818795 proV 12318198 proV Shigella flexneri 2002017 Glycine betaine/L-proline transport ATP-binding protein YP_005728330.1 2817392 D 591020 CDS YP_005728331.1 384544268 12318199 2818788..2819852 1 NC_017328.1 putative ABC-type proline/glycine betaine transport system, permease component 2819852 proW 12318199 proW Shigella flexneri 2002017 putative ABC-type proline/glycine betaine transport system, permease component YP_005728331.1 2818788 D 591020 CDS YP_005728332.1 384544269 12318200 2819910..2820902 1 NC_017328.1 Glycine betaine/L-proline transport system permease protein 2820902 proX 12318200 proX Shigella flexneri 2002017 Glycine betaine/L-proline transport system permease protein YP_005728332.1 2819910 D 591020 CDS YP_005728333.1 384544270 12318201 2820955..2821101 1 NC_017328.1 hypothetical protein 2821101 12318201 SFxv_2970 Shigella flexneri 2002017 hypothetical protein YP_005728333.1 2820955 D 591020 CDS YP_005728334.1 384544271 12318203 2822397..2823134 1 NC_017328.1 Transporter, branched chain amino acid exporter (LIV-E) family 2823134 ygaZ 12318203 ygaZ Shigella flexneri 2002017 Transporter, branched chain amino acid exporter (LIV-E) family YP_005728334.1 2822397 D 591020 CDS YP_005728335.1 384544272 12318204 2823124..2823459 1 NC_017328.1 inner membrane protein 2823459 ygaH 12318204 ygaH Shigella flexneri 2002017 inner membrane protein YP_005728335.1 2823124 D 591020 CDS YP_005728336.1 384544273 12318205 2823550..2824080 1 NC_017328.1 Regulator of plasmid mcrB operon 2824080 mprA 12318205 mprA Shigella flexneri 2002017 Regulator of plasmid mcrB operon YP_005728336.1 2823550 D 591020 CDS YP_005728337.1 384544274 12318207 2825396..2826934 1 NC_017328.1 Multidrug resistant protein emrB 2826934 emrB 12318207 emrB Shigella flexneri 2002017 Multidrug resistant protein emrB YP_005728337.1 2825396 D 591020 CDS YP_005728338.1 384544275 12318208 complement(2826998..2827513) 1 NC_017328.1 S-ribosylhomocysteine lyase 2827513 luxS 12318208 luxS Shigella flexneri 2002017 S-ribosylhomocysteine lyase YP_005728338.1 2826998 R 591020 CDS YP_005728339.1 384544276 12318209 complement(2827663..2829219) 1 NC_017328.1 putative Gamma-glutamylcysteine synthetase 2829219 gshA 12318209 gshA Shigella flexneri 2002017 putative Gamma-glutamylcysteine synthetase YP_005728339.1 2827663 R 591020 CDS YP_005728340.1 384544277 12318210 complement(2829292..2829720) 1 NC_017328.1 Inner membrane protein yqaA 2829720 yqaA 12318210 yqaA Shigella flexneri 2002017 Inner membrane protein yqaA YP_005728340.1 2829292 R 591020 CDS YP_005728341.1 384544278 12318211 complement(2829717..2830283) 1 NC_017328.1 putative phosphatase/phosphohexomutase 2830283 yqaB 12318211 yqaB Shigella flexneri 2002017 putative phosphatase/phosphohexomutase YP_005728341.1 2829717 R 591020 CDS YP_005728342.1 384544279 12318215 complement(2831060..2831245) 1 NC_017328.1 Carbon storage regulator 2831245 csrA 12318215 csrA Shigella flexneri 2002017 Carbon storage regulator YP_005728342.1 2831060 R 591020 CDS YP_005728343.1 384544280 12318216 complement(2831480..2834110) 1 NC_017328.1 alanyl-tRNA synthetase 2834110 alaS 12318216 alaS Shigella flexneri 2002017 alanyl-tRNA synthetase YP_005728343.1 2831480 R 591020 CDS YP_005728344.1 384544281 12318217 2834060..2834197 1 NC_017328.1 hypothetical protein 2834197 12318217 SFxv_2984 Shigella flexneri 2002017 hypothetical protein YP_005728344.1 2834060 D 591020 CDS YP_005728345.1 384544282 12318218 complement(2834238..2834738) 1 NC_017328.1 Regulatory protein 2834738 recX 12318218 recX Shigella flexneri 2002017 Regulatory protein YP_005728345.1 2834238 R 591020 CDS YP_005728346.1 384544283 12318219 complement(2834981..2836042) 1 NC_017328.1 recombinase A 2836042 recA 12318219 recA Shigella flexneri 2002017 recombinase A YP_005728346.1 2834981 R 591020 CDS YP_005728347.1 384544284 12318220 complement(2836122..2836619) 1 NC_017328.1 competence damage-inducible protein A 2836619 ygaD 12318220 ygaD Shigella flexneri 2002017 competence damage-inducible protein A YP_005728347.1 2836122 R 591020 CDS YP_005728348.1 384544285 12318221 complement(2836764..2837909) 1 NC_017328.1 Membrane-bound lytic murein transglycosylase B 2837909 mltB 12318221 mltB Shigella flexneri 2002017 Membrane-bound lytic murein transglycosylase B YP_005728348.1 2836764 R 591020 CDS YP_005728349.1 384544286 12318223 2838665..2839624 1 NC_017328.1 PTS system, glucitol/sorbitol-specific IIB component and second of two IIC components 2839624 srlE 12318223 srlE Shigella flexneri 2002017 PTS system, glucitol/sorbitol-specific IIB component and second of two IIC components YP_005728349.1 2838665 D 591020 CDS YP_005728350.1 384544287 12318224 2839635..2840006 1 NC_017328.1 Glucitol/sorbitol-specific phosphotransferase enzyme IIA component 2840006 srlB 12318224 srlB Shigella flexneri 2002017 Glucitol/sorbitol-specific phosphotransferase enzyme IIA component YP_005728350.1 2839635 D 591020 CDS YP_005728351.1 384544288 12318225 2840010..2840789 1 NC_017328.1 Glucitol (Sorbitol)-6-phosphate dehydrogenase 2840789 srlD 12318225 srlD Shigella flexneri 2002017 Glucitol (Sorbitol)-6-phosphate dehydrogenase YP_005728351.1 2840010 D 591020 CDS YP_005728352.1 384544289 12318226 2840894..2841253 1 NC_017328.1 glucitol operon activator 2841253 gutM 12318226 gutM Shigella flexneri 2002017 glucitol operon activator YP_005728352.1 2840894 D 591020 CDS YP_005728353.1 384544290 12318227 2841320..2842093 1 NC_017328.1 Regulator for gut (Srl), glucitol operon 2842093 srlR 12318227 srlR Shigella flexneri 2002017 Regulator for gut (Srl), glucitol operon YP_005728353.1 2841320 D 591020 CDS YP_005728354.1 384544291 12318228 2842086..2843051 1 NC_017328.1 putative sugar phosphate isomerase involved in capsule formation 2843051 gutQ 12318228 gutQ Shigella flexneri 2002017 putative sugar phosphate isomerase involved in capsule formation YP_005728354.1 2842086 D 591020 CDS YP_005728355.1 384544292 12318229 complement(2843048..2844562) 1 NC_017328.1 Anaerobic nitric oxide reductase transcription regulator norR 2844562 norR 12318229 norR Shigella flexneri 2002017 Anaerobic nitric oxide reductase transcription regulator norR YP_005728355.1 2843048 R 591020 CDS YP_005728356.1 384544293 12318230 2844749..2846188 1 NC_017328.1 anaerobic nitric oxide reductase flavorubredoxin 2846188 norV 12318230 norV Shigella flexneri 2002017 anaerobic nitric oxide reductase flavorubredoxin YP_005728356.1 2844749 D 591020 CDS YP_005728357.1 384544294 12318231 2846185..2847318 1 NC_017328.1 Nitric oxide reductase FlRd-NAD(+) reductase 2847318 norW 12318231 norW Shigella flexneri 2002017 Nitric oxide reductase FlRd-NAD(+) reductase YP_005728357.1 2846185 D 591020 CDS YP_005728358.1 384544295 12318232 complement(2847446..2849698) 1 NC_017328.1 putative hydrogenase maturation factor 2849698 hypF 12318232 hypF Shigella flexneri 2002017 putative hydrogenase maturation factor YP_005728358.1 2847446 R 591020 CDS YP_005728359.1 384544296 12318233 complement(2849851..2850378) 1 NC_017328.1 4Fe-4S binding protein 2850378 hydN 12318233 hydN Shigella flexneri 2002017 4Fe-4S binding protein YP_005728359.1 2849851 R 591020 CDS YP_005728360.1 384544297 12318234 complement(2850356..2850493) 1 NC_017328.1 hypothetical protein 2850493 12318234 SFxv_3001 Shigella flexneri 2002017 hypothetical protein YP_005728360.1 2850356 R 591020 CDS YP_005728361.1 384544298 12318235 complement(2850528..2851580) 1 NC_017328.1 putative transcriptional regulator 2851580 ascG 12318235 ascG Shigella flexneri 2002017 putative transcriptional regulator YP_005728361.1 2850528 R 591020 CDS YP_005728362.1 384544299 12318236 complement(2851552..2851671) 1 NC_017328.1 putative iron-sulfur protein of hydrogenase 3 2851671 hycF 12318236 hycF Shigella flexneri 2002017 putative iron-sulfur protein of hydrogenase 3 YP_005728362.1 2851552 R 591020 CDS YP_005728363.1 384544300 12318237 complement(2851681..2853411) 1 NC_017328.1 Large subunit of hydrogenase 3 2853411 hycE 12318237 hycE Shigella flexneri 2002017 Large subunit of hydrogenase 3 YP_005728363.1 2851681 R 591020 CDS YP_005728364.1 384544301 12318238 complement(2853408..2854331) 1 NC_017328.1 Membrane-spanning protein of hydrogenase 3 2854331 hycD 12318238 hycD Shigella flexneri 2002017 Membrane-spanning protein of hydrogenase 3 YP_005728364.1 2853408 R 591020 CDS YP_005728365.1 384544302 12318239 complement(2854334..2856151) 1 NC_017328.1 Membrane-spanning protein of hydrogenase 3 2856151 hycC 12318239 hycC Shigella flexneri 2002017 Membrane-spanning protein of hydrogenase 3 YP_005728365.1 2854334 R 591020 CDS YP_005728366.1 384544303 12318240 complement(2856188..2856799) 1 NC_017328.1 Formate hydrogenlyase subunit 2 2856799 hycB 12318240 hycB Shigella flexneri 2002017 Formate hydrogenlyase subunit 2 YP_005728366.1 2856188 R 591020 CDS YP_005728367.1 384544304 12318241 complement(2856924..2857385) 1 NC_017328.1 Formate hydrogenlyase regulatory protein hycA 2857385 hycA 12318241 hycA Shigella flexneri 2002017 Formate hydrogenlyase regulatory protein hycA YP_005728367.1 2856924 R 591020 CDS YP_005728368.1 384544305 12318242 2857585..2857947 1 NC_017328.1 putative Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) 2857947 hypA 12318242 hypA Shigella flexneri 2002017 putative Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) YP_005728368.1 2857585 D 591020 CDS YP_005728369.1 384544306 12318243 2857951..2858823 1 NC_017328.1 Guanine-nucleotide binding protein 2858823 hypB 12318243 hypB Shigella flexneri 2002017 Guanine-nucleotide binding protein YP_005728369.1 2857951 D 591020 CDS YP_005728370.1 384544307 12318244 2858814..2859086 1 NC_017328.1 Hydrogenase isoenzymes formation protein hypC 2859086 hypC 12318244 hypC Shigella flexneri 2002017 Hydrogenase isoenzymes formation protein hypC YP_005728370.1 2858814 D 591020 CDS YP_005728371.1 384544308 12318245 2859086..2860207 1 NC_017328.1 Hydrogenase isoenzyme HypD 2860207 hypD 12318245 hypD Shigella flexneri 2002017 Hydrogenase isoenzyme HypD YP_005728371.1 2859086 D 591020 CDS YP_005728372.1 384544309 12318246 2860204..2861214 1 NC_017328.1 putative hydrogenase maturation factor 2861214 hypE 12318246 hypE Shigella flexneri 2002017 putative hydrogenase maturation factor YP_005728372.1 2860204 D 591020 CDS YP_005728373.1 384544310 12318247 2861252..2863366 1 NC_017328.1 Formate hydrogenlyase transcriptional activator 2863366 fhlA 12318247 fhlA Shigella flexneri 2002017 Formate hydrogenlyase transcriptional activator YP_005728373.1 2861252 D 591020 CDS YP_005728374.1 384544311 12318248 complement(2863403..2863756) 1 NC_017328.1 hypothetical protein 2863756 12318248 SFxv_3015 Shigella flexneri 2002017 hypothetical protein YP_005728374.1 2863403 R 591020 CDS YP_005728375.1 384544312 12318249 complement(2863819..2864322) 1 NC_017328.1 IS1 ORF2 2864322 12318249 SFxv_3016 Shigella flexneri 2002017 IS1 ORF2 YP_005728375.1 2863819 R 591020 CDS YP_005728376.1 384544313 12318250 2864436..2864723 1 NC_017328.1 putative IS1 encoded protein 2864723 12318250 SFxv_3017 Shigella flexneri 2002017 putative IS1 encoded protein YP_005728376.1 2864436 D 591020 CDS YP_005728377.1 384544314 12318251 2864820..2867381 1 NC_017328.1 DNA mismatch repair protein mutS 2867381 mutS 12318251 mutS Shigella flexneri 2002017 DNA mismatch repair protein mutS YP_005728377.1 2864820 D 591020 CDS YP_005728378.1 384544315 12318253 complement(2868190..2868987) 1 NC_017328.1 putative DEOR-type transcriptional regulator 2868987 ygbI 12318253 ygbI Shigella flexneri 2002017 putative DEOR-type transcriptional regulator YP_005728378.1 2868190 R 591020 CDS YP_005728379.1 384544316 12318255 2870058..2870291 1 NC_017328.1 hypothetical protein 2870291 12318255 SFxv_3022 Shigella flexneri 2002017 hypothetical protein YP_005728379.1 2870058 D 591020 CDS YP_005728380.1 384544317 12318256 2870681..2871454 1 NC_017328.1 IS600 ORF2 2871454 12318256 SFxv_3023 Shigella flexneri 2002017 IS600 ORF2 YP_005728380.1 2870681 D 591020 CDS YP_005728381.1 384544318 12318257 2871854..2872672 1 NC_017328.1 IS600 ORF2 2872672 12318257 SFxv_3024 Shigella flexneri 2002017 IS600 ORF2 YP_005728381.1 2871854 D 591020 CDS YP_005728382.1 384544319 12318258 complement(2872906..2875002) 1 NC_017328.1 putative phage transposase 2875002 12318258 SFxv_3025 Shigella flexneri 2002017 putative phage transposase YP_005728382.1 2872906 R 591020 CDS YP_005728383.1 384544320 12318259 complement(2875004..2875255) 1 NC_017328.1 putative DNA-binding protein 2875255 12318259 SFxv_3026 Shigella flexneri 2002017 putative DNA-binding protein YP_005728383.1 2875004 R 591020 CDS YP_005728384.1 384544321 12318260 2875420..2875983 1 NC_017328.1 putative regulatory protein 2875983 12318260 SFxv_3027 Shigella flexneri 2002017 putative regulatory protein YP_005728384.1 2875420 D 591020 CDS YP_005728385.1 384544322 12318261 complement(2876253..2877203) 1 NC_017328.1 putative 3-polyprenyl-4-hydroxybenzoate decarboxylase-like decarboxylase 2877203 12318261 SFxv_3028 Shigella flexneri 2002017 putative 3-polyprenyl-4-hydroxybenzoate decarboxylase-like decarboxylase YP_005728385.1 2876253 R 591020 CDS YP_005728386.1 384544323 12318262 complement(2877203..2877796) 1 NC_017328.1 putative aromatic acid decarboxylase 2877796 12318262 SFxv_3029 Shigella flexneri 2002017 putative aromatic acid decarboxylase YP_005728386.1 2877203 R 591020 CDS YP_005728387.1 384544324 12318263 2877943..2878350 1 NC_017328.1 putative transcriptional regulator 2878350 12318263 SFxv_3030 Shigella flexneri 2002017 putative transcriptional regulator YP_005728387.1 2877943 D 591020 CDS YP_005728388.1 384544325 12318264 complement(2878470..2879498) 1 NC_017328.1 RNA polymerase sigma factor 2879498 rpoS 12318264 rpoS Shigella flexneri 2002017 RNA polymerase sigma factor YP_005728388.1 2878470 R 591020 CDS YP_005728389.1 384544326 12318265 complement(2879525..2880664) 1 NC_017328.1 Lipoprotein NlpD 2880664 nlpD 12318265 nlpD Shigella flexneri 2002017 Lipoprotein NlpD YP_005728389.1 2879525 R 591020 CDS YP_005728390.1 384544327 12318266 2880540..2880689 1 NC_017328.1 hypothetical protein 2880689 12318266 SFxv_3032 Shigella flexneri 2002017 hypothetical protein YP_005728390.1 2880540 D 591020 CDS YP_005728391.1 384544328 12318267 complement(2880804..2881430) 1 NC_017328.1 protein-L-isoaspartate O-methyltransferase 2881430 pcm 12318267 pcm Shigella flexneri 2002017 protein-L-isoaspartate O-methyltransferase YP_005728391.1 2880804 R 591020 CDS YP_005728392.1 384544329 12318268 complement(2881424..2882230) 1 NC_017328.1 stationary phase survival protein SurE 2882230 surE 12318268 surE Shigella flexneri 2002017 stationary phase survival protein SurE YP_005728392.1 2881424 R 591020 CDS YP_005728393.1 384544330 12318269 complement(2882166..2883215) 1 NC_017328.1 tRNA pseudouridine synthase D 2883215 truD 12318269 truD Shigella flexneri 2002017 tRNA pseudouridine synthase D YP_005728393.1 2882166 R 591020 CDS YP_005728394.1 384544331 12318270 complement(2883212..2883691) 1 NC_017328.1 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase 2883691 ispF 12318270 ispF Shigella flexneri 2002017 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase YP_005728394.1 2883212 R 591020 CDS YP_005728395.1 384544332 12318271 complement(2883691..2884401) 1 NC_017328.1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2884401 ispD 12318271 ispD Shigella flexneri 2002017 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_005728395.1 2883691 R 591020 CDS YP_005728396.1 384544333 12318272 complement(2884420..2884731) 1 NC_017328.1 ftsB-like cell division protein 2884731 ftsB 12318272 ftsB Shigella flexneri 2002017 ftsB-like cell division protein YP_005728396.1 2884420 R 591020 CDS YP_005728397.1 384544334 12318273 complement(2884925..2885248) 1 NC_017328.1 putative cytochrome oxidase subunit 2885248 ygbE 12318273 ygbE Shigella flexneri 2002017 putative cytochrome oxidase subunit YP_005728397.1 2884925 R 591020 CDS YP_005728398.1 384544335 12318274 complement(2885298..2885903) 1 NC_017328.1 Adenylyl-sulfate kinase 2885903 cysC 12318274 cysC Shigella flexneri 2002017 Adenylyl-sulfate kinase YP_005728398.1 2885298 R 591020 CDS YP_005728399.1 384544336 12318275 complement(2885903..2887330) 1 NC_017328.1 sulfate adenylyltransferase 2887330 cysN 12318275 cysN Shigella flexneri 2002017 sulfate adenylyltransferase YP_005728399.1 2885903 R 591020 CDS YP_005728400.1 384544337 12318276 complement(2887332..2888174) 1 NC_017328.1 sulfate adenylyltransferase 2888174 cysD 12318276 cysD Shigella flexneri 2002017 sulfate adenylyltransferase YP_005728400.1 2887332 R 591020 CDS YP_005728401.1 384544338 12318277 2888493..2889530 1 NC_017328.1 Alkaline phosphatase isozyme conversion, aminopeptidase 2889530 iap 12318277 iap Shigella flexneri 2002017 Alkaline phosphatase isozyme conversion, aminopeptidase YP_005728401.1 2888493 D 591020 CDS YP_005728402.1 384544339 12318278 complement(2889616..2890725) 1 NC_017328.1 putative helicase 2890725 12318278 SFxv_3045 Shigella flexneri 2002017 putative helicase YP_005728402.1 2889616 R 591020 CDS YP_005728403.1 384544340 12318279 complement(2890961..2891113) 1 NC_017328.1 putative protein hokG 2891113 12318279 SFxv_3046 Shigella flexneri 2002017 putative protein hokG YP_005728403.1 2890961 R 591020 CDS YP_005728404.1 384544341 12318280 complement(2891377..2892111) 1 NC_017328.1 phosphoadenosine phosphosulfate reductase 2892111 cysH 12318280 cysH Shigella flexneri 2002017 phosphoadenosine phosphosulfate reductase YP_005728404.1 2891377 R 591020 CDS YP_005728405.1 384544342 12318281 complement(2892185..2893897) 1 NC_017328.1 Sulfite reductase [NADPH] hemoprotein beta-component 2893897 cysI 12318281 cysI Shigella flexneri 2002017 Sulfite reductase [NADPH] hemoprotein beta-component YP_005728405.1 2892185 R 591020 CDS YP_005728406.1 384544343 12318282 complement(2893897..2895696) 1 NC_017328.1 Sulfite reductase [NADPH] flavoprotein alpha-component 2895696 cysJ 12318282 cysJ Shigella flexneri 2002017 Sulfite reductase [NADPH] flavoprotein alpha-component YP_005728406.1 2893897 R 591020 CDS YP_005728407.1 384544344 12318283 2895928..2896377 1 NC_017328.1 putative 6-pyruvoyl tetrahydrobiopterin synthase 2896377 sscR 12318283 sscR Shigella flexneri 2002017 putative 6-pyruvoyl tetrahydrobiopterin synthase YP_005728407.1 2895928 D 591020 CDS YP_005728408.1 384544345 12318284 2896425..2897726 1 NC_017328.1 putative Dehydrogenases (flavoproteins) 2897726 ygcN 12318284 ygcN Shigella flexneri 2002017 putative Dehydrogenases (flavoproteins) YP_005728408.1 2896425 D 591020 CDS YP_005728409.1 384544346 12318285 2897681..2897977 1 NC_017328.1 putative Ferredoxin-like protein 2897977 ygcO 12318285 ygcO Shigella flexneri 2002017 putative Ferredoxin-like protein YP_005728409.1 2897681 D 591020 CDS YP_005728410.1 384544347 12318287 complement(2898717..2899610) 1 NC_017328.1 putative electron transfer flavoprotein subunit ygcQ 2899610 ygcQ 12318287 ygcQ Shigella flexneri 2002017 putative electron transfer flavoprotein subunit ygcQ YP_005728410.1 2898717 R 591020 CDS YP_005728411.1 384544348 12318288 complement(2899574..2900359) 1 NC_017328.1 putative electron transfer flavoprotein subunit ygcR 2900359 ygcR 12318288 ygcR Shigella flexneri 2002017 putative electron transfer flavoprotein subunit ygcR YP_005728411.1 2899574 R 591020 CDS YP_005728412.1 384544349 12318289 complement(2900331..2901740) 1 NC_017328.1 putative permeases of the major facilitator superfamily 2901740 ygcS 12318289 ygcS Shigella flexneri 2002017 putative permeases of the major facilitator superfamily YP_005728412.1 2900331 R 591020 CDS YP_005728413.1 384544350 12318290 complement(2901762..2902790) 1 NC_017328.1 FAD linked oxidase domain-containing protein 2902790 ygcU 12318290 ygcU Shigella flexneri 2002017 FAD linked oxidase domain-containing protein YP_005728413.1 2901762 R 591020 CDS YP_005728414.1 384544351 12318291 2902865..2903368 1 NC_017328.1 IS1 orfB 2903368 12318291 SFxv_3059 Shigella flexneri 2002017 IS1 orfB YP_005728414.1 2902865 D 591020 CDS YP_005728415.1 384544352 12318292 complement(2903407..2904078) 1 NC_017328.1 hypothetical protein 2904078 12318292 SFxv_3060 Shigella flexneri 2002017 hypothetical protein YP_005728415.1 2903407 R 591020 CDS YP_005728416.1 384544353 12318293 2904217..2904357 1 NC_017328.1 hypothetical protein 2904357 12318293 SFxv_3061 Shigella flexneri 2002017 hypothetical protein YP_005728416.1 2904217 D 591020 CDS YP_005728417.1 384544354 12318294 2904666..2905169 1 NC_017328.1 IS1 orfB 2905169 12318294 SFxv_3062 Shigella flexneri 2002017 IS1 orfB YP_005728417.1 2904666 D 591020 CDS YP_005728418.1 384544355 12318296 complement(2906040..2907338) 1 NC_017328.1 enolase 2907338 eno 12318296 eno Shigella flexneri 2002017 enolase YP_005728418.1 2906040 R 591020 CDS YP_005728419.1 384544356 12318297 complement(2907426..2909063) 1 NC_017328.1 putative CTP synthase (UTP-ammonia lyase) 2909063 pyrG 12318297 pyrG Shigella flexneri 2002017 putative CTP synthase (UTP-ammonia lyase) YP_005728419.1 2907426 R 591020 CDS YP_005728420.1 384544357 12318298 complement(2909291..2910082) 1 NC_017328.1 nucleoside triphosphate pyrophosphohydrolase 2910082 mazG 12318298 mazG Shigella flexneri 2002017 nucleoside triphosphate pyrophosphohydrolase YP_005728420.1 2909291 R 591020 CDS YP_005728421.1 384544358 12318299 complement(2910178..2912412) 1 NC_017328.1 GTP pyrophosphokinase 2912412 relA 12318299 relA Shigella flexneri 2002017 GTP pyrophosphokinase YP_005728421.1 2910178 R 591020 CDS YP_005728422.1 384544359 12318300 complement(2912460..2913761) 1 NC_017328.1 23S rRNA (uracil-5-)-methyltransferase rumA 2913761 rumA 12318300 rumA Shigella flexneri 2002017 23S rRNA (uracil-5-)-methyltransferase rumA YP_005728422.1 2912460 R 591020 CDS YP_005728423.1 384544360 12318301 2913818..2916574 1 NC_017328.1 Signal transduction histidine-protein kinase barA 2916574 barA 12318301 barA Shigella flexneri 2002017 Signal transduction histidine-protein kinase barA YP_005728423.1 2913818 D 591020 CDS YP_005728424.1 384544361 12318302 complement(2916806..2918146) 1 NC_017328.1 putative glucarate dehydratase 2918146 gudD 12318302 gudD Shigella flexneri 2002017 putative glucarate dehydratase YP_005728424.1 2916806 R 591020 CDS YP_005728425.1 384544362 12318303 complement(2918167..2919507) 1 NC_017328.1 putative glucarate dehydratase 2919507 gudX 12318303 gudX Shigella flexneri 2002017 putative glucarate dehydratase YP_005728425.1 2918167 R 591020 CDS YP_005728426.1 384544363 12318304 complement(2919509..2920861) 1 NC_017328.1 D-galactonate transporter 2920861 gudP 12318304 gudP Shigella flexneri 2002017 D-galactonate transporter YP_005728426.1 2919509 R 591020 CDS YP_005728427.1 384544364 12318305 complement(2921295..2921744) 1 NC_017328.1 Flavodoxin/nitric oxide synthase 2921744 yqcA 12318305 yqcA Shigella flexneri 2002017 Flavodoxin/nitric oxide synthase YP_005728427.1 2921295 R 591020 CDS YP_005728428.1 384544365 12318306 complement(2921762..2922544) 1 NC_017328.1 tRNA pseudouridine synthase C 2922544 truC 12318306 truC Shigella flexneri 2002017 tRNA pseudouridine synthase C YP_005728428.1 2921762 R 591020 CDS YP_005728429.1 384544366 12318307 complement(2922544..2922873) 1 NC_017328.1 hypothetical protein 2922873 12318307 SFxv_3077 Shigella flexneri 2002017 hypothetical protein YP_005728429.1 2922544 R 591020 CDS YP_005728430.1 384544367 12318308 complement(2923495..2924040) 1 NC_017328.1 hypothetical protein 2924040 syd 12318308 syd Shigella flexneri 2002017 hypothetical protein YP_005728430.1 2923495 R 591020 CDS YP_005728431.1 384544368 12318309 2924108..2924956 1 NC_017328.1 NADPH-dependent 7-cyano-7-deazaguanine reductase 2924956 queF 12318309 queF Shigella flexneri 2002017 NADPH-dependent 7-cyano-7-deazaguanine reductase YP_005728431.1 2924108 D 591020 CDS YP_005728432.1 384544369 12318310 2925068..2926432 1 NC_017328.1 hypothetical protein 2926432 12318310 SFxv_3080 Shigella flexneri 2002017 hypothetical protein YP_005728432.1 2925068 D 591020 CDS YP_005728433.1 384544370 12318312 2928424..2929713 1 NC_017328.1 Serine transporter 2929713 sdaC 12318312 sdaC Shigella flexneri 2002017 Serine transporter YP_005728433.1 2928424 D 591020 CDS YP_005728434.1 384544371 12318313 2929771..2931138 1 NC_017328.1 L-serine dehydratase (Deaminase), L-SD2 2931138 sdaB 12318313 sdaB Shigella flexneri 2002017 L-serine dehydratase (Deaminase), L-SD2 YP_005728434.1 2929771 D 591020 CDS YP_005728435.1 384544372 12318314 2931159..2932004 1 NC_017328.1 putative exonuclease xni 2932004 ygdG 12318314 ygdG Shigella flexneri 2002017 putative exonuclease xni YP_005728435.1 2931159 D 591020 CDS YP_005728436.1 384544373 12318315 complement(2932057..2933208) 1 NC_017328.1 L-1,2-propanediol oxidoreductase 2933208 fucO 12318315 fucO Shigella flexneri 2002017 L-1,2-propanediol oxidoreductase YP_005728436.1 2932057 R 591020 CDS YP_005728437.1 384544374 12318316 complement(2933233..2933880) 1 NC_017328.1 L-fuculose phosphate aldolase 2933880 fucA 12318316 fucA Shigella flexneri 2002017 L-fuculose phosphate aldolase YP_005728437.1 2933233 R 591020 CDS YP_005728438.1 384544375 12318317 2934070..2934207 1 NC_017328.1 hypothetical protein 2934207 12318317 SFxv_3087 Shigella flexneri 2002017 hypothetical protein YP_005728438.1 2934070 D 591020 CDS YP_005728439.1 384544376 12318318 2934476..2935744 1 NC_017328.1 Fucose permease 2935744 fucP 12318318 fucP Shigella flexneri 2002017 Fucose permease YP_005728439.1 2934476 D 591020 CDS YP_005728440.1 384544377 12318319 2935777..2937552 1 NC_017328.1 L-fucose isomerase 2937552 fucI 12318319 fucI Shigella flexneri 2002017 L-fucose isomerase YP_005728440.1 2935777 D 591020 CDS YP_005728441.1 384544378 12318321 2939082..2939504 1 NC_017328.1 Protein of fucose operon 2939504 fucU 12318321 fucU Shigella flexneri 2002017 Protein of fucose operon YP_005728441.1 2939082 D 591020 CDS YP_005728442.1 384544379 12318322 2939562..2940293 1 NC_017328.1 L-fucose operon activator 2940293 fucR 12318322 fucR Shigella flexneri 2002017 L-fucose operon activator YP_005728442.1 2939562 D 591020 CDS YP_005728443.1 384544380 12318323 complement(2940337..2941437) 1 NC_017328.1 putative RNA 2'-O-ribose methyltransferase mtfA 2941437 ygdE 12318323 ygdE Shigella flexneri 2002017 putative RNA 2'-O-ribose methyltransferase mtfA YP_005728443.1 2940337 R 591020 CDS YP_005728444.1 384544381 12318325 complement(2941845..2942762) 1 NC_017328.1 Positive regulator of gcv operon 2942762 gcvA 12318325 gcvA Shigella flexneri 2002017 Positive regulator of gcv operon YP_005728444.1 2941845 R 591020 CDS YP_005728445.1 384544382 12318326 complement(2943113..2943343) 1 NC_017328.1 putative lipoprotein 2943343 ygdI 12318326 ygdI Shigella flexneri 2002017 putative lipoprotein YP_005728445.1 2943113 R 591020 CDS YP_005728446.1 384544383 12318327 2943532..2944737 1 NC_017328.1 cysteine sulfinate desulfinase 2944737 csdA 12318327 csdA Shigella flexneri 2002017 cysteine sulfinate desulfinase YP_005728446.1 2943532 D 591020 CDS YP_005728447.1 384544384 12318328 2944737..2945180 1 NC_017328.1 putative sufE-like protein ygdK 2945180 csdE 12318328 csdE Shigella flexneri 2002017 putative sufE-like protein ygdK YP_005728447.1 2944737 D 591020 CDS YP_005728448.1 384544385 12318329 complement(2945231..2946037) 1 NC_017328.1 hypothetical protein 2946037 12318329 SFxv_3099 Shigella flexneri 2002017 hypothetical protein YP_005728448.1 2945231 R 591020 CDS YP_005728449.1 384544386 12318330 complement(2946275..2947372) 1 NC_017328.1 Membrane-bound lytic murein transglycosylase A 2947372 mltA 12318330 mltA Shigella flexneri 2002017 Membrane-bound lytic murein transglycosylase A YP_005728449.1 2946275 R 591020 CDS YP_005728450.1 384544387 12318333 complement(2947842..2949185) 1 NC_017328.1 N-acetylmuramoyl-L-alanine amidase AmiC 2949185 amiC 12318333 amiC Shigella flexneri 2002017 N-acetylmuramoyl-L-alanine amidase AmiC YP_005728450.1 2947842 R 591020 CDS YP_005728451.1 384544388 12318334 2949327..2950658 1 NC_017328.1 Amino-acid acetyltransferase 2950658 argA 12318334 argA Shigella flexneri 2002017 Amino-acid acetyltransferase YP_005728451.1 2949327 D 591020 CDS YP_005728452.1 384544389 12318335 complement(2950720..2952546) 1 NC_017328.1 DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease 2952546 recD 12318335 recD Shigella flexneri 2002017 DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease YP_005728452.1 2950720 R 591020 CDS YP_005728453.1 384544390 12318336 complement(2952546..2956088) 1 NC_017328.1 DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease 2956088 recB 12318336 recB Shigella flexneri 2002017 DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease YP_005728453.1 2952546 R 591020 CDS YP_005728454.1 384544391 12318337 complement(2956081..2958969) 1 NC_017328.1 putative Secreted/periplasmic Zn-dependent peptidase, insulinase-like protein 2958969 ptrA 12318337 ptrA Shigella flexneri 2002017 putative Secreted/periplasmic Zn-dependent peptidase, insulinase-like protein YP_005728454.1 2956081 R 591020 CDS YP_005728455.1 384544392 12318338 complement(2959145..2962513) 1 NC_017328.1 DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease 2962513 recC 12318338 recC Shigella flexneri 2002017 DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease YP_005728455.1 2959145 R 591020 CDS YP_005728456.1 384544393 12318339 complement(2962526..2962885) 1 NC_017328.1 Prepilin peptidase dependent protein C 2962885 ppdC 12318339 ppdC Shigella flexneri 2002017 Prepilin peptidase dependent protein C YP_005728456.1 2962526 R 591020 CDS YP_005728457.1 384544394 12318340 complement(2962870..2963277) 1 NC_017328.1 hypothetical protein 2963277 12318340 SFxv_3108 Shigella flexneri 2002017 hypothetical protein YP_005728457.1 2962870 R 591020 CDS YP_005728458.1 384544395 12318341 complement(2963274..2963837) 1 NC_017328.1 Prepilin peptidase dependent protein B 2963837 ppdB 12318341 ppdB Shigella flexneri 2002017 Prepilin peptidase dependent protein B YP_005728458.1 2963274 R 591020 CDS YP_005728459.1 384544396 12318343 complement(2964482..2965276) 1 NC_017328.1 Thymidylate synthase 2965276 thyA 12318343 thyA Shigella flexneri 2002017 Thymidylate synthase YP_005728459.1 2964482 R 591020 CDS YP_005728460.1 384544397 12318344 complement(2965283..2966158) 1 NC_017328.1 prolipoprotein diacylglyceryl transferase 2966158 lgt 12318344 lgt Shigella flexneri 2002017 prolipoprotein diacylglyceryl transferase YP_005728460.1 2965283 R 591020 CDS YP_005728461.1 384544398 12318345 complement(2966309..2968555) 1 NC_017328.1 Phosphoenolpyruvate-protein phosphotransferase ptsP 2968555 ptsP 12318345 ptsP Shigella flexneri 2002017 Phosphoenolpyruvate-protein phosphotransferase ptsP YP_005728461.1 2966309 R 591020 CDS YP_005728462.1 384544399 12318346 complement(2968568..2969098) 1 NC_017328.1 (Di)nucleoside polyphosphate hydrolase 2969098 rppH 12318346 rppH Shigella flexneri 2002017 (Di)nucleoside polyphosphate hydrolase YP_005728462.1 2968568 R 591020 CDS YP_005728463.1 384544400 12318347 complement(2969451..2969597) 1 NC_017328.1 hypothetical protein 2969597 ygdT 12318347 ygdT Shigella flexneri 2002017 hypothetical protein YP_005728463.1 2969451 R 591020 CDS YP_005728464.1 384544401 12318348 2969783..2970472 1 NC_017328.1 DNA mismatch repair protein mutH 2970472 mutH 12318348 mutH Shigella flexneri 2002017 DNA mismatch repair protein mutH YP_005728464.1 2969783 D 591020 CDS YP_005728465.1 384544402 12318349 2970541..2971254 1 NC_017328.1 putative: Membrane protein TerC, possibly involved in tellurium resistance 2971254 ygdQ 12318349 ygdQ Shigella flexneri 2002017 putative: Membrane protein TerC, possibly involved in tellurium resistance YP_005728465.1 2970541 D 591020 CDS YP_005728466.1 384544403 12318350 2971392..2971610 1 NC_017328.1 putative lipoprotein ygdR precursor 2971610 ygdR 12318350 ygdR Shigella flexneri 2002017 putative lipoprotein ygdR precursor YP_005728466.1 2971392 D 591020 CDS YP_005728467.1 384544404 12318351 2971718..2972758 1 NC_017328.1 NADP(H)-dependent aldo-keto reductase Tas 2972758 tas 12318351 tas Shigella flexneri 2002017 NADP(H)-dependent aldo-keto reductase Tas YP_005728467.1 2971718 D 591020 CDS YP_005728468.1 384544405 12318352 complement(2972791..2973981) 1 NC_017328.1 Lysophospholipid transporter lplT 2973981 lplT 12318352 lplT Shigella flexneri 2002017 Lysophospholipid transporter lplT YP_005728468.1 2972791 R 591020 CDS YP_005728469.1 384544406 12318353 complement(2973974..2976133) 1 NC_017328.1 Bifunctional protein Aas 2976133 aas 12318353 aas Shigella flexneri 2002017 Bifunctional protein Aas YP_005728469.1 2973974 R 591020 CDS YP_005728470.1 384544407 12318354 2976720..2977751 1 NC_017328.1 Repressor of galETK operon 2977751 galR 12318354 galR Shigella flexneri 2002017 Repressor of galETK operon YP_005728470.1 2976720 D 591020 CDS YP_005728471.1 384544408 12318355 complement(2977758..2979020) 1 NC_017328.1 diaminopimelate decarboxylase 2979020 lysA 12318355 lysA Shigella flexneri 2002017 diaminopimelate decarboxylase YP_005728471.1 2977758 R 591020 CDS YP_005728472.1 384544409 12318356 2979143..2980078 1 NC_017328.1 Positive regulator for lysine 2980078 lysR 12318356 lysR Shigella flexneri 2002017 Positive regulator for lysine YP_005728472.1 2979143 D 591020 CDS YP_005728473.1 384544410 12318357 complement(2980886..2982433) 1 NC_017328.1 Arabinose-proton symporter 2982433 araE 12318357 araE Shigella flexneri 2002017 Arabinose-proton symporter YP_005728473.1 2980886 R 591020 CDS YP_005728474.1 384544411 12318358 complement(2982619..2983380) 1 NC_017328.1 2-deoxy-D-gluconate 3-dehydrogenase 2983380 kduD 12318358 kduD Shigella flexneri 2002017 2-deoxy-D-gluconate 3-dehydrogenase YP_005728474.1 2982619 R 591020 CDS YP_005728475.1 384544412 12318359 complement(2983410..2984246) 1 NC_017328.1 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase 2984246 kduI 12318359 kduI Shigella flexneri 2002017 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase YP_005728475.1 2983410 R 591020 CDS YP_005728476.1 384544413 12318360 complement(2984533..2985714) 1 NC_017328.1 putative acyltransferase 2985714 yqeF 12318360 yqeF Shigella flexneri 2002017 putative acyltransferase YP_005728476.1 2984533 R 591020 CDS YP_005728477.1 384544414 12318361 2986080..2987198 1 NC_017328.1 putative Amino acid permease 2987198 yqeG 12318361 yqeG Shigella flexneri 2002017 putative Amino acid permease YP_005728477.1 2986080 D 591020 CDS YP_005728478.1 384544415 12318362 2987824..2988132 1 NC_017328.1 putative transposase 2988132 12318362 SFxv_3130 Shigella flexneri 2002017 putative transposase YP_005728478.1 2987824 D 591020 CDS YP_005728479.1 384544416 12318363 2988129..2988995 1 NC_017328.1 IS3 orfB 2988995 12318363 SFxv_3131 Shigella flexneri 2002017 IS3 orfB YP_005728479.1 2988129 D 591020 CDS YP_005728480.1 384544417 12318364 complement(2989009..2989602) 1 NC_017328.1 hypothetical protein 2989602 12318364 SFxv_3132 Shigella flexneri 2002017 hypothetical protein YP_005728480.1 2989009 R 591020 CDS YP_005728481.1 384544418 12318365 complement(2990234..2991223) 1 NC_017328.1 hypothetical protein 2991223 12318365 SFxv_3133 Shigella flexneri 2002017 hypothetical protein YP_005728481.1 2990234 R 591020 CDS YP_005728482.1 384544419 12318366 complement(2991307..2991612) 1 NC_017328.1 putative Chromosome segregation ATPase 2991612 12318366 SFxv_3134 Shigella flexneri 2002017 putative Chromosome segregation ATPase YP_005728482.1 2991307 R 591020 CDS YP_005728483.1 384544420 12318367 complement(2991609..2992448) 1 NC_017328.1 IS911 orfA 2992448 12318367 SFxv_3135 Shigella flexneri 2002017 IS911 orfA YP_005728483.1 2991609 R 591020 CDS YP_005728484.1 384544421 12318368 complement(2992847..2992993) 1 NC_017328.1 hypothetical protein 2992993 12318368 SFxv_3136 Shigella flexneri 2002017 hypothetical protein YP_005728484.1 2992847 R 591020 CDS YP_005728485.1 384544422 12318369 complement(2993291..2994037) 1 NC_017328.1 putative phage-encoded protein 2994037 12318369 SFxv_3137 Shigella flexneri 2002017 putative phage-encoded protein YP_005728485.1 2993291 R 591020 CDS YP_005728486.1 384544423 12318370 complement(2995156..2995488) 1 NC_017328.1 hypothetical protein 2995488 12318370 SFxv_3138 Shigella flexneri 2002017 hypothetical protein YP_005728486.1 2995156 R 591020 CDS YP_005728487.1 384544424 12318371 complement(2995599..2997218) 1 NC_017328.1 putative integrase 2997218 12318371 SFxv_3139 Shigella flexneri 2002017 putative integrase YP_005728487.1 2995599 R 591020 CDS YP_005728488.1 384544425 12318373 complement(2997505..2998284) 1 NC_017328.1 putative lipoprotein 2998284 ygeR 12318373 ygeR Shigella flexneri 2002017 putative lipoprotein YP_005728488.1 2997505 R 591020 CDS YP_005728489.1 384544426 12318375 3000983..3001861 1 NC_017328.1 Xanthine dehydrogenase FAD-binding subunit 3001861 xdhB 12318375 xdhB Shigella flexneri 2002017 Xanthine dehydrogenase FAD-binding subunit YP_005728489.1 3000983 D 591020 CDS YP_005728490.1 384544427 12318376 3001858..3002337 1 NC_017328.1 Xanthine dehydrogenase iron-sulfur-binding subunit 3002337 xdhC 12318376 xdhC Shigella flexneri 2002017 Xanthine dehydrogenase iron-sulfur-binding subunit YP_005728490.1 3001858 D 591020 CDS YP_005728491.1 384544428 12318377 complement(3002357..3002569) 1 NC_017328.1 putative integrase encoded by prophage CP-933K 3002569 12318377 SFxv_3145 Shigella flexneri 2002017 putative integrase encoded by prophage CP-933K YP_005728491.1 3002357 R 591020 CDS YP_005728492.1 384544429 12318378 3002450..3002725 1 NC_017328.1 IS1 orfB, A 3002725 12318378 SFxv_3144 Shigella flexneri 2002017 IS1 orfB, A YP_005728492.1 3002450 D 591020 CDS YP_005728493.1 384544430 12318379 3002644..3003126 1 NC_017328.1 IS1 orfB 3003126 12318379 SFxv_3146 Shigella flexneri 2002017 IS1 orfB YP_005728493.1 3002644 D 591020 CDS YP_005728494.1 384544431 12318380 complement(3002960..3003865) 1 NC_017328.1 IS2 ORF2 3003865 12318380 SFxv_3149 Shigella flexneri 2002017 IS2 ORF2 YP_005728494.1 3002960 R 591020 CDS YP_005728495.1 384544432 12318381 3003389..3003820 1 NC_017328.1 Insertion element IS2 protein 3003820 12318381 SFxv_3147 Shigella flexneri 2002017 Insertion element IS2 protein YP_005728495.1 3003389 D 591020 CDS YP_005728496.1 384544433 12318382 complement(3003823..3004188) 1 NC_017328.1 IS2 ORF1 3004188 12318382 SFxv_3150 Shigella flexneri 2002017 IS2 ORF1 YP_005728496.1 3003823 R 591020 CDS YP_005728497.1 384544434 12318383 3004915..3006432 1 NC_017328.1 putative purine permease ygfU 3006432 ygfU 12318383 ygfU Shigella flexneri 2002017 putative purine permease ygfU YP_005728497.1 3004915 D 591020 CDS YP_005728498.1 384544435 12318384 3006682..3007230 1 NC_017328.1 Isopentenyl-diphosphate Delta-isomerase 3007230 idi 12318384 idi Shigella flexneri 2002017 Isopentenyl-diphosphate Delta-isomerase YP_005728498.1 3006682 D 591020 CDS YP_005728499.1 384544436 12318385 complement(3007273..3008790) 1 NC_017328.1 lysyl-tRNA synthetase 3008790 lysS 12318385 lysS Shigella flexneri 2002017 lysyl-tRNA synthetase YP_005728499.1 3007273 R 591020 CDS YP_005728500.1 384544437 12318386 complement(3008800..3009681) 1 NC_017328.1 Peptide chain release factor 2 3009681 12318386 SFxv_3155 Shigella flexneri 2002017 Peptide chain release factor 2 YP_005728500.1 3008800 R 591020 CDS YP_005728501.1 384544438 12318387 3009682..3009837 1 NC_017328.1 hypothetical protein 3009837 12318387 SFxv_3156 Shigella flexneri 2002017 hypothetical protein YP_005728501.1 3009682 D 591020 CDS YP_005728502.1 384544439 12318388 complement(3009989..3011722) 1 NC_017328.1 SsDNA exonuclease 3011722 recJ 12318388 recJ Shigella flexneri 2002017 SsDNA exonuclease YP_005728502.1 3009989 R 591020 CDS YP_005728503.1 384544440 12318389 complement(3011728..3012438) 1 NC_017328.1 Thiol:disulfide interchange protein DsbC 3012438 dsbC 12318389 dsbC Shigella flexneri 2002017 Thiol:disulfide interchange protein DsbC YP_005728503.1 3011728 R 591020 CDS YP_005728504.1 384544441 12318390 complement(3012463..3013284) 1 NC_017328.1 tyrosine recombinase XerD 3013284 xerD 12318390 xerD Shigella flexneri 2002017 tyrosine recombinase XerD YP_005728504.1 3012463 R 591020 CDS YP_005728505.1 384544442 12318391 3013471..3013992 1 NC_017328.1 Flavodoxin 2 3013992 fldB 12318391 fldB Shigella flexneri 2002017 Flavodoxin 2 YP_005728505.1 3013471 D 591020 CDS YP_005728506.1 384544443 12318392 complement(3014032..3014439) 1 NC_017328.1 hypothetical protein 3014439 ygfX 12318392 ygfX Shigella flexneri 2002017 hypothetical protein YP_005728506.1 3014032 R 591020 CDS YP_005728507.1 384544444 12318393 complement(3014420..3014686) 1 NC_017328.1 hypothetical protein 3014686 12318393 SFxv_3162 Shigella flexneri 2002017 hypothetical protein YP_005728507.1 3014420 R 591020 CDS YP_005728508.1 384544445 12318394 3014992..3015909 1 NC_017328.1 tRNA-modifying protein ygfZ 3015909 ygfZ 12318394 ygfZ Shigella flexneri 2002017 tRNA-modifying protein ygfZ YP_005728508.1 3014992 D 591020 CDS YP_005728509.1 384544446 12318395 complement(3016105..3016764) 1 NC_017328.1 inner membrane protein yqfA 3016764 yqfA 12318395 yqfA Shigella flexneri 2002017 inner membrane protein yqfA YP_005728509.1 3016105 R 591020 CDS YP_005728510.1 384544447 12318396 complement(3016928..3017128) 1 NC_017328.1 hypothetical protein 3017128 12318396 SFxv_3165 Shigella flexneri 2002017 hypothetical protein YP_005728510.1 3016928 R 591020 CDS YP_005728511.1 384544448 12318397 3017277..3018716 1 NC_017328.1 6-phospho-beta-glucosidase 3018716 bglA 12318397 bglA Shigella flexneri 2002017 6-phospho-beta-glucosidase YP_005728511.1 3017277 D 591020 CDS YP_005728512.1 384544449 12318398 complement(3018773..3019516) 1 NC_017328.1 putative dehydrogenase 3019516 12318398 SFxv_3167 Shigella flexneri 2002017 putative dehydrogenase YP_005728512.1 3018773 R 591020 CDS YP_005728513.1 384544450 12318399 complement(3019783..3022656) 1 NC_017328.1 Glycine dehydrogenase 3022656 gcvP 12318399 gcvP Shigella flexneri 2002017 Glycine dehydrogenase YP_005728513.1 3019783 R 591020 CDS YP_005728514.1 384544451 12318400 complement(3022775..3023164) 1 NC_017328.1 Glycine cleavage system H protein 3023164 gcvH 12318400 gcvH Shigella flexneri 2002017 Glycine cleavage system H protein YP_005728514.1 3022775 R 591020 CDS YP_005728515.1 384544452 12318401 complement(3023188..3024282) 1 NC_017328.1 aminomethyltransferase 3024282 gcvT 12318401 gcvT Shigella flexneri 2002017 aminomethyltransferase YP_005728515.1 3023188 R 591020 CDS YP_005728516.1 384544453 12318402 complement(3024730..3025932) 1 NC_017328.1 hypothetical protein 3025932 12318402 SFxv_3171 Shigella flexneri 2002017 hypothetical protein YP_005728516.1 3024730 R 591020 CDS YP_005728517.1 384544454 12318403 complement(3025955..3027133) 1 NC_017328.1 2-octaprenyl-6-methoxyphenol 4-monooxygenase 3027133 ubiH 12318403 ubiH Shigella flexneri 2002017 2-octaprenyl-6-methoxyphenol 4-monooxygenase YP_005728517.1 3025955 R 591020 CDS YP_005728518.1 384544455 12318404 complement(3027130..3028455) 1 NC_017328.1 Proline aminopeptidase P II 3028455 pepP 12318404 pepP Shigella flexneri 2002017 Proline aminopeptidase P II YP_005728518.1 3027130 R 591020 CDS YP_005728519.1 384544456 12318405 complement(3028481..3029065) 1 NC_017328.1 hypothetical protein 3029065 12318405 SFxv_3174 Shigella flexneri 2002017 hypothetical protein YP_005728519.1 3028481 R 591020 CDS YP_005728520.1 384544457 12318406 3029227..3029556 1 NC_017328.1 Z-ring-associated protein 3029556 zapA 12318406 zapA Shigella flexneri 2002017 Z-ring-associated protein YP_005728520.1 3029227 D 591020 CDS YP_005728521.1 384544458 12318407 3029658..3030404 1 NC_017328.1 5,10-methenyltetrahydrofolate synthetase 3030404 ygfA 12318407 ygfA Shigella flexneri 2002017 5,10-methenyltetrahydrofolate synthetase YP_005728521.1 3029658 D 591020 CDS YP_005728522.1 384544459 12318408 complement(3031185..3032417) 1 NC_017328.1 D-3-phosphoglycerate dehydrogenase 3032417 serA 12318408 serA Shigella flexneri 2002017 D-3-phosphoglycerate dehydrogenase YP_005728522.1 3031185 R 591020 CDS YP_005728523.1 384544460 12318409 complement(3032673..3033332) 1 NC_017328.1 putative ribose 5-phosphate isomerase 3033332 rpiA 12318409 rpiA Shigella flexneri 2002017 putative ribose 5-phosphate isomerase YP_005728523.1 3032673 R 591020 CDS YP_005728524.1 384544461 12318410 3033649..3034608 1 NC_017328.1 Chromosome initiation inhibitor 3034608 argP 12318410 argP Shigella flexneri 2002017 Chromosome initiation inhibitor YP_005728524.1 3033649 D 591020 CDS YP_005728525.1 384544462 12318411 3034812..3036956 1 NC_017328.1 methylmalonyl-CoA mutase 3036956 scpA 12318411 scpA Shigella flexneri 2002017 methylmalonyl-CoA mutase YP_005728525.1 3034812 D 591020 CDS YP_005728526.1 384544463 12318412 3036949..3037944 1 NC_017328.1 putative nucleotide-binding protein 3037944 argK 12318412 argK Shigella flexneri 2002017 putative nucleotide-binding protein YP_005728526.1 3036949 D 591020 CDS YP_005728527.1 384544464 12318413 3037955..3038740 1 NC_017328.1 Methylmalonyl-CoA decarboxylase 3038740 scpB 12318413 scpB Shigella flexneri 2002017 Methylmalonyl-CoA decarboxylase YP_005728527.1 3037955 D 591020 CDS YP_005728528.1 384544465 12318415 complement(3040184..3041134) 1 NC_017328.1 putative LYSR-type transcriptional regulator 3041134 ygfI 12318415 ygfI Shigella flexneri 2002017 putative LYSR-type transcriptional regulator YP_005728528.1 3040184 R 591020 CDS YP_005728529.1 384544466 12318416 complement(3041301..3042041) 1 NC_017328.1 hypothetical protein 3042041 12318416 SFxv_3186 Shigella flexneri 2002017 hypothetical protein YP_005728529.1 3041301 R 591020 CDS YP_005728530.1 384544467 12318417 complement(3042134..3042769) 1 NC_017328.1 Arginine exporter protein argO 3042769 argO 12318417 argO Shigella flexneri 2002017 Arginine exporter protein argO YP_005728530.1 3042134 R 591020 CDS YP_005728531.1 384544468 12318418 complement(3042908..3043768) 1 NC_017328.1 Small-conductance mechanosensitive channel 3043768 mscS 12318418 mscS Shigella flexneri 2002017 Small-conductance mechanosensitive channel YP_005728531.1 3042908 R 591020 CDS YP_005728532.1 384544469 12318419 complement(3043959..3045122) 1 NC_017328.1 Fructose-bisphosphate aldolase class II 3045122 fbaA 12318419 fbaA Shigella flexneri 2002017 Fructose-bisphosphate aldolase class II YP_005728532.1 3043959 R 591020 CDS YP_005728533.1 384544470 12318420 complement(3045253..3046416) 1 NC_017328.1 phosphoglycerate kinase 3046416 pgk 12318420 pgk Shigella flexneri 2002017 phosphoglycerate kinase YP_005728533.1 3045253 R 591020 CDS YP_005728534.1 384544471 12318421 complement(3046466..3047485) 1 NC_017328.1 D-erythrose-4-phosphate dehydrogenase 3047485 epd 12318421 epd Shigella flexneri 2002017 D-erythrose-4-phosphate dehydrogenase YP_005728534.1 3046466 R 591020 CDS YP_005728535.1 384544472 12318422 3048019..3048288 1 NC_017328.1 putative DNA-binding protein with PD1-like DNA-binding motif 3048288 12318422 SFxv_3192 Shigella flexneri 2002017 putative DNA-binding protein with PD1-like DNA-binding motif YP_005728535.1 3048019 D 591020 CDS YP_005728536.1 384544473 12318423 3048311..3048889 1 NC_017328.1 putative inner membrane protein 3048889 12318423 SFxv_3193 Shigella flexneri 2002017 putative inner membrane protein YP_005728536.1 3048311 D 591020 CDS YP_005728537.1 384544474 12318425 3049585..3050262 1 NC_017328.1 putative ATP-binding protein of ABC transport system 3050262 12318425 SFxv_3195 Shigella flexneri 2002017 putative ATP-binding protein of ABC transport system YP_005728537.1 3049585 D 591020 CDS YP_005728538.1 384544475 12318426 3050223..3050933 1 NC_017328.1 putative ABC-type sulfate/molybdate transport systems, ATPase component 3050933 12318426 SFxv_3196 Shigella flexneri 2002017 putative ABC-type sulfate/molybdate transport systems, ATPase component YP_005728538.1 3050223 D 591020 CDS YP_005728539.1 384544476 12318427 complement(3050905..3051618) 1 NC_017328.1 pantothenate kinase 3051618 yggC 12318427 yggC Shigella flexneri 2002017 pantothenate kinase YP_005728539.1 3050905 R 591020 CDS YP_005728540.1 384544477 12318428 complement(3051615..3052124) 1 NC_017328.1 putative transcriptional regulator 3052124 yggD 12318428 yggD Shigella flexneri 2002017 putative transcriptional regulator YP_005728540.1 3051615 R 591020 CDS YP_005728541.1 384544478 12318429 complement(3052146..3053111) 1 NC_017328.1 putative Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase-like protein 3053111 yggF 12318429 yggF Shigella flexneri 2002017 putative Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase-like protein YP_005728541.1 3052146 R 591020 CDS YP_005728542.1 384544479 12318430 complement(3053108..3054349) 1 NC_017328.1 L-sorbose 1-phosphate reductase 3054349 yggP 12318430 yggP Shigella flexneri 2002017 L-sorbose 1-phosphate reductase YP_005728542.1 3053108 R 591020 CDS YP_005728543.1 384544480 12318431 complement(3054351..3054854) 1 NC_017328.1 IS1 ORF2 3054854 12318431 SFxv_3201 Shigella flexneri 2002017 IS1 ORF2 YP_005728543.1 3054351 R 591020 CDS YP_005728544.1 384544481 12318432 3054968..3055147 1 NC_017328.1 IS600 ORF2 3055147 12318432 SFxv_3202 Shigella flexneri 2002017 IS600 ORF2 YP_005728544.1 3054968 D 591020 CDS YP_005728545.1 384544482 12318433 3055539..3056447 1 NC_017328.1 putative serine protease 3056447 12318433 SFxv_3203 Shigella flexneri 2002017 putative serine protease YP_005728545.1 3055539 D 591020 CDS YP_005728546.1 384544483 12318434 complement(3056493..3058484) 1 NC_017328.1 Transketolase 1 isozyme 3058484 tktA 12318434 tktA Shigella flexneri 2002017 Transketolase 1 isozyme YP_005728546.1 3056493 R 591020 CDS YP_005728547.1 384544484 12318435 3058543..3059520 1 NC_017328.1 hypothetical protein 3059520 12318435 SFxv_3205 Shigella flexneri 2002017 hypothetical protein YP_005728547.1 3058543 D 591020 CDS YP_005728548.1 384544485 12318436 complement(3059726..3060646) 1 NC_017328.1 Agmatinase 3060646 speB 12318436 speB Shigella flexneri 2002017 Agmatinase YP_005728548.1 3059726 R 591020 CDS YP_005728549.1 384544486 12318437 complement(3060782..3061156) 1 NC_017328.1 putative lipoprotein 3061156 12318437 SFxv_3207 Shigella flexneri 2002017 putative lipoprotein YP_005728549.1 3060782 R 591020 CDS YP_005728550.1 384544487 12318438 complement(3061182..3061685) 1 NC_017328.1 IS1 ORF2 3061685 12318438 SFxv_3208 Shigella flexneri 2002017 IS1 ORF2 YP_005728550.1 3061182 R 591020 CDS YP_005728551.1 384544488 12318439 3061799..3061948 1 NC_017328.1 IS600 ORF2 3061948 12318439 SFxv_3209 Shigella flexneri 2002017 IS600 ORF2 YP_005728551.1 3061799 D 591020 CDS YP_005728552.1 384544489 12318440 complement(3062026..3064014) 1 NC_017328.1 biosynthetic arginine decarboxylase 3064014 speA 12318440 speA Shigella flexneri 2002017 biosynthetic arginine decarboxylase YP_005728552.1 3062026 R 591020 CDS YP_005728553.1 384544490 12318441 complement(3064011..3064157) 1 NC_017328.1 hypothetical protein 3064157 12318441 SFxv_3211 Shigella flexneri 2002017 hypothetical protein YP_005728553.1 3064011 R 591020 CDS YP_005728554.1 384544491 12318442 3064278..3064493 1 NC_017328.1 hypothetical protein 3064493 12318442 SFxv_3212 Shigella flexneri 2002017 hypothetical protein YP_005728554.1 3064278 D 591020 CDS YP_005728555.1 384544492 12318443 complement(3064490..3064741) 1 NC_017328.1 hypothetical protein 3064741 12318443 SFxv_3213 Shigella flexneri 2002017 hypothetical protein YP_005728555.1 3064490 R 591020 CDS YP_005728556.1 384544493 12318444 3064797..3065951 1 NC_017328.1 S-adenosylmethionine synthetase 3065951 metK 12318444 metK Shigella flexneri 2002017 S-adenosylmethionine synthetase YP_005728556.1 3064797 D 591020 CDS YP_005728557.1 384544494 12318445 3066388..3067782 1 NC_017328.1 Galactose-proton symporter 3067782 galP 12318445 galP Shigella flexneri 2002017 Galactose-proton symporter YP_005728557.1 3066388 D 591020 CDS YP_005728558.1 384544495 12318446 3067859..3068356 1 NC_017328.1 hypothetical protein 3068356 12318446 SFxv_3216 Shigella flexneri 2002017 hypothetical protein YP_005728558.1 3067859 D 591020 CDS YP_005728559.1 384544496 12318447 3068451..3069158 1 NC_017328.1 DNA-specific endonuclease I 3069158 endA 12318447 endA Shigella flexneri 2002017 DNA-specific endonuclease I YP_005728559.1 3068451 D 591020 CDS YP_005728560.1 384544497 12318448 3069211..3069969 1 NC_017328.1 hypothetical protein 3069969 12318448 SFxv_3218 Shigella flexneri 2002017 hypothetical protein YP_005728560.1 3069211 D 591020 CDS YP_005728561.1 384544498 12318449 3069982..3070932 1 NC_017328.1 Glutathione synthetase 3070932 gshB 12318449 gshB Shigella flexneri 2002017 Glutathione synthetase YP_005728561.1 3069982 D 591020 CDS YP_005728562.1 384544499 12318450 3070969..3071604 1 NC_017328.1 hypothetical protein 3071604 12318450 SFxv_3220 Shigella flexneri 2002017 hypothetical protein YP_005728562.1 3070969 D 591020 CDS YP_005728563.1 384544500 12318451 3071604..3072020 1 NC_017328.1 putative Holliday junction resolvase 3072020 yqgF 12318451 yqgF Shigella flexneri 2002017 putative Holliday junction resolvase YP_005728563.1 3071604 D 591020 CDS YP_005728564.1 384544501 12318452 complement(3072196..3073221) 1 NC_017328.1 putative transport protein 3073221 yggR 12318452 yggR Shigella flexneri 2002017 putative transport protein YP_005728564.1 3072196 R 591020 CDS YP_005728565.1 384544502 12318453 3073194..3073898 1 NC_017328.1 putative enzyme with a TIM-barrel fold 3073898 yggS 12318453 yggS Shigella flexneri 2002017 putative enzyme with a TIM-barrel fold YP_005728565.1 3073194 D 591020 CDS YP_005728566.1 384544503 12318454 3073916..3074482 1 NC_017328.1 hypothetical protein 3074482 yggT 12318454 yggT Shigella flexneri 2002017 hypothetical protein YP_005728566.1 3073916 D 591020 CDS YP_005728567.1 384544504 12318455 3074777..3075370 1 NC_017328.1 nucleoside-triphosphatase rdgB 3075370 rdgB 12318455 rdgB Shigella flexneri 2002017 nucleoside-triphosphatase rdgB YP_005728567.1 3074777 D 591020 CDS YP_005728568.1 384544505 12318456 3075363..3076499 1 NC_017328.1 putative Coproporphyrinogen III oxidase-like Fe-S oxidoreductase 3076499 yggW 12318456 yggW Shigella flexneri 2002017 putative Coproporphyrinogen III oxidase-like Fe-S oxidoreductase YP_005728568.1 3075363 D 591020 CDS YP_005728569.1 384544506 12318457 3077183..3077776 1 NC_017328.1 putative dicarboxylate-binding periplasmic protein 3077776 12318457 SFxv_3227 Shigella flexneri 2002017 putative dicarboxylate-binding periplasmic protein YP_005728569.1 3077183 D 591020 CDS YP_005728570.1 384544507 12318458 3077821..3078324 1 NC_017328.1 putative small integral C4-dicarboxylate membrane transport protein DctQ 3078324 12318458 SFxv_3228 Shigella flexneri 2002017 putative small integral C4-dicarboxylate membrane transport protein DctQ YP_005728570.1 3077821 D 591020 CDS YP_005728571.1 384544508 12318460 3078951..3079184 1 NC_017328.1 IS600 ORF2 3079184 12318460 SFxv_3230 Shigella flexneri 2002017 IS600 ORF2 YP_005728571.1 3078951 D 591020 CDS YP_005728572.1 384544509 12318461 3079088..3080389 1 NC_017328.1 hypothetical protein 3080389 12318461 SFxv_3231 Shigella flexneri 2002017 hypothetical protein YP_005728572.1 3079088 D 591020 CDS YP_005728573.1 384544510 12318462 complement(3080490..3081452) 1 NC_017328.1 putative alpha helix chain 3081452 yggM 12318462 yggM Shigella flexneri 2002017 putative alpha helix chain YP_005728573.1 3080490 R 591020 CDS YP_005728574.1 384544511 12319111 complement(3081569..3082615) 1 NC_017328.1 Periplasmic L-asparaginase II 3082615 ansB 12319111 ansB Shigella flexneri 2002017 Periplasmic L-asparaginase II YP_005728574.1 3081569 R 591020 CDS YP_005728575.1 384544512 12319112 complement(3082791..3083510) 1 NC_017328.1 hypothetical protein 3083510 yggN 12319112 yggN Shigella flexneri 2002017 hypothetical protein YP_005728575.1 3082791 R 591020 CDS YP_005728576.1 384544513 12319113 complement(3083694..3084020) 1 NC_017328.1 hypothetical protein 3084020 yggL 12319113 yggL Shigella flexneri 2002017 hypothetical protein YP_005728576.1 3083694 R 591020 CDS YP_005728577.1 384544514 12319114 complement(3084020..3084739) 1 NC_017328.1 tRNA (guanine-N(7)-)-methyltransferase 3084739 trmI 12319114 trmI Shigella flexneri 2002017 tRNA (guanine-N(7)-)-methyltransferase YP_005728577.1 3084020 R 591020 CDS YP_005728578.1 384544515 12319115 3084870..3085952 1 NC_017328.1 Adenine glycosylase 3085952 mutY 12319115 mutY Shigella flexneri 2002017 Adenine glycosylase YP_005728578.1 3084870 D 591020 CDS YP_005728579.1 384544516 12319116 3085980..3086255 1 NC_017328.1 putative Fe(2+)-trafficking protein 3086255 yggX 12319116 yggX Shigella flexneri 2002017 putative Fe(2+)-trafficking protein YP_005728579.1 3085980 D 591020 CDS YP_005728580.1 384544517 12319117 3086318..3087400 1 NC_017328.1 Membrane-bound lytic murein transglycosylase C 3087400 mltC 12319117 mltC Shigella flexneri 2002017 Membrane-bound lytic murein transglycosylase C YP_005728580.1 3086318 D 591020 CDS YP_005728581.1 384544518 12319118 3087554..3088858 1 NC_017328.1 Transport of nucleosides, permease protein 3088858 nupG 12319118 nupG Shigella flexneri 2002017 Transport of nucleosides, permease protein YP_005728581.1 3087554 D 591020 CDS YP_005728582.1 384544519 12319119 complement(3088907..3091102) 1 NC_017328.1 Ornithine decarboxylase isozyme 3091102 speC 12319119 speC Shigella flexneri 2002017 Ornithine decarboxylase isozyme YP_005728582.1 3088907 R 591020 CDS YP_005728583.1 384544520 12319120 3091440..3092147 1 NC_017328.1 Na+ channel or pump 3092147 yqgA 12319120 yqgA Shigella flexneri 2002017 Na+ channel or pump YP_005728583.1 3091440 D 591020 CDS YP_005728584.1 384544521 12319122 3092526..3093788 1 NC_017328.1 Site-specific recombinase, phage integrase family protein 3093788 12319122 SFxv_3245 Shigella flexneri 2002017 Site-specific recombinase, phage integrase family protein YP_005728584.1 3092526 D 591020 CDS YP_005728585.1 384544522 12319123 3094241..3097756 1 NC_017328.1 putative superfamily I DNA helicase 3097756 12319123 SFxv_3246 Shigella flexneri 2002017 putative superfamily I DNA helicase YP_005728585.1 3094241 D 591020 CDS YP_005728586.1 384544523 12319124 3098096..3098461 1 NC_017328.1 putative transposase 3098461 12319124 SFxv_3248 Shigella flexneri 2002017 putative transposase YP_005728586.1 3098096 D 591020 CDS YP_005728587.1 384544524 12319125 3099066..3099866 1 NC_017328.1 hypothetical protein 3099866 12319125 SFxv_3249 Shigella flexneri 2002017 hypothetical protein YP_005728587.1 3099066 D 591020 CDS YP_005728588.1 384544525 12319126 3100227..3104084 1 NC_017328.1 Serine protease 3104084 12319126 SFxv_3250 Shigella flexneri 2002017 Serine protease YP_005728588.1 3100227 D 591020 CDS YP_005728589.1 384544526 12319127 3104131..3104871 1 NC_017328.1 hypothetical protein 3104871 12319127 SFxv_3251 Shigella flexneri 2002017 hypothetical protein YP_005728589.1 3104131 D 591020 CDS YP_005728590.1 384544527 12319128 complement(3105114..3105521) 1 NC_017328.1 putative transposase 3105521 12319128 SFxv_3252 Shigella flexneri 2002017 putative transposase YP_005728590.1 3105114 R 591020 CDS YP_005728591.1 384544528 12319129 3105587..3106093 1 NC_017328.1 putative transposase 3106093 12319129 SFxv_3253 Shigella flexneri 2002017 putative transposase YP_005728591.1 3105587 D 591020 CDS YP_005728592.1 384544529 12319130 3106180..3107094 1 NC_017328.1 putative transposase 3107094 12319130 SFxv_3254 Shigella flexneri 2002017 putative transposase YP_005728592.1 3106180 D 591020 CDS YP_005728593.1 384544530 12319131 3107157..3107375 1 NC_017328.1 IS1414, transposase 3107375 12319131 SFxv_3255 Shigella flexneri 2002017 IS1414, transposase YP_005728593.1 3107157 D 591020 CDS YP_005728594.1 384544531 12319132 complement(3107526..3111644) 1 NC_017328.1 Serine protease pic precursor 3111644 12319132 SFxv_3258 Shigella flexneri 2002017 Serine protease pic precursor YP_005728594.1 3107526 R 591020 CDS YP_005728595.1 384544532 12319133 3109344..3109529 1 NC_017328.1 Toxin subunit Set1B 3109529 12319133 SFxv_3256 Shigella flexneri 2002017 Toxin subunit Set1B YP_005728595.1 3109344 D 591020 CDS YP_005728596.1 384544533 12319134 3109533..3110066 1 NC_017328.1 Toxin subunit Set1A 3110066 12319134 SFxv_3257 Shigella flexneri 2002017 Toxin subunit Set1A YP_005728596.1 3109533 D 591020 CDS YP_005728597.1 384544534 12319135 complement(3111809..3112195) 1 NC_017328.1 IS629 ORF2 3112195 12319135 SFxv_3259 Shigella flexneri 2002017 IS629 ORF2 YP_005728597.1 3111809 R 591020 CDS YP_005728598.1 384544535 12319136 complement(3112372..3113646) 1 NC_017328.1 Reverse transcriptase-like protein 3113646 12319136 SFxv_3260 Shigella flexneri 2002017 Reverse transcriptase-like protein YP_005728598.1 3112372 R 591020 CDS YP_005728599.1 384544536 12319137 3113852..3114277 1 NC_017328.1 hypothetical protein 3114277 12319137 SFxv_3262 Shigella flexneri 2002017 hypothetical protein YP_005728599.1 3113852 D 591020 CDS YP_005728600.1 384544537 12319138 3114312..3114563 1 NC_017328.1 hypothetical protein 3114563 12319138 SFxv_3263 Shigella flexneri 2002017 hypothetical protein YP_005728600.1 3114312 D 591020 CDS YP_005728601.1 384544538 12319139 complement(3114490..3114969) 1 NC_017328.1 IS629 ORF2 3114969 12319139 SFxv_3265 Shigella flexneri 2002017 IS629 ORF2 YP_005728601.1 3114490 R 591020 CDS YP_005728602.1 384544539 12319140 complement(3114969..3115295) 1 NC_017328.1 IS629 orfA 3115295 12319140 SFxv_3266 Shigella flexneri 2002017 IS629 orfA YP_005728602.1 3114969 R 591020 CDS YP_005728603.1 384544540 12319141 complement(3115578..3116003) 1 NC_017328.1 hypothetical protein 3116003 12319141 SFxv_3267 Shigella flexneri 2002017 hypothetical protein YP_005728603.1 3115578 R 591020 CDS YP_005728604.1 384544541 12319142 complement(3116000..3116383) 1 NC_017328.1 hypothetical protein 3116383 12319142 SFxv_3268 Shigella flexneri 2002017 hypothetical protein YP_005728604.1 3116000 R 591020 CDS YP_005728605.1 384544542 12319143 3117304..3117663 1 NC_017328.1 IS911 orfA 3117663 12319143 SFxv_3269 Shigella flexneri 2002017 IS911 orfA YP_005728605.1 3117304 D 591020 CDS YP_005728606.1 384544543 12319144 complement(3118008..3118607) 1 NC_017328.1 hypothetical protein 3118607 12319144 SFxv_3272 Shigella flexneri 2002017 hypothetical protein YP_005728606.1 3118008 R 591020 CDS YP_005728607.1 384544544 12319145 3119324..3119689 1 NC_017328.1 IS2 ORF1 3119689 12319145 SFxv_3273 Shigella flexneri 2002017 IS2 ORF1 YP_005728607.1 3119324 D 591020 CDS YP_005728608.1 384544545 12319146 complement(3119696..3120124) 1 NC_017328.1 Insertion element IS2 protein 3120124 12319146 SFxv_3276 Shigella flexneri 2002017 Insertion element IS2 protein YP_005728608.1 3119696 R 591020 CDS YP_005728609.1 384544546 12319147 3119714..3120553 1 NC_017328.1 IS2 orfB 3120553 12319147 SFxv_3275 Shigella flexneri 2002017 IS2 orfB YP_005728609.1 3119714 D 591020 CDS YP_005728610.1 384544547 12319148 3121236..3122150 1 NC_017328.1 hypothetical protein 3122150 12319148 SFxv_3277 Shigella flexneri 2002017 hypothetical protein YP_005728610.1 3121236 D 591020 CDS YP_005728611.1 384544548 12319149 3122412..3122618 1 NC_017328.1 Regulator of excision 3122618 12319149 SFxv_3278 Shigella flexneri 2002017 Regulator of excision YP_005728611.1 3122412 D 591020 CDS YP_005728612.1 384544549 12319150 3122704..3123276 1 NC_017328.1 hypothetical protein 3123276 12319150 SFxv_3279 Shigella flexneri 2002017 hypothetical protein YP_005728612.1 3122704 D 591020 CDS YP_005728613.1 384544550 12319151 complement(3123278..3123562) 1 NC_017328.1 hypothetical protein 3123562 12319151 SFxv_3282 Shigella flexneri 2002017 hypothetical protein YP_005728613.1 3123278 R 591020 CDS YP_005728614.1 384544551 12319152 3123512..3123676 1 NC_017328.1 Iso-IS1 ORF2 3123676 12319152 SFxv_3281 Shigella flexneri 2002017 Iso-IS1 ORF2 YP_005728614.1 3123512 D 591020 CDS YP_005728615.1 384544552 12319153 3124845..3125819 1 NC_017328.1 hypothetical protein 3125819 12319153 SFxv_3284 Shigella flexneri 2002017 hypothetical protein YP_005728615.1 3124845 D 591020 CDS YP_005728616.1 384544553 12319154 3125975..3126847 1 NC_017328.1 putative GTPase 3126847 12319154 SFxv_3285 Shigella flexneri 2002017 putative GTPase YP_005728616.1 3125975 D 591020 CDS YP_005728617.1 384544554 12319155 3127175..3130303 1 NC_017328.1 Outer membrane fluffing protein 3130303 flu 12319155 flu Shigella flexneri 2002017 Outer membrane fluffing protein YP_005728617.1 3127175 D 591020 CDS YP_005728618.1 384544555 12319156 3130424..3132940 1 NC_017328.1 hypothetical protein 3132940 12319156 SFxv_3287 Shigella flexneri 2002017 hypothetical protein YP_005728618.1 3130424 D 591020 CDS YP_005728619.1 384544556 12319157 3133016..3133471 1 NC_017328.1 hypothetical protein 3133471 12319157 SFxv_3288 Shigella flexneri 2002017 hypothetical protein YP_005728619.1 3133016 D 591020 CDS YP_005728620.1 384544557 12319158 3133489..3133617 1 NC_017328.1 hypothetical protein 3133617 12319158 SFxv_3289 Shigella flexneri 2002017 hypothetical protein YP_005728620.1 3133489 D 591020 CDS YP_005728621.1 384544558 12319159 complement(3133590..3133778) 1 NC_017328.1 hypothetical protein 3133778 12319159 SFxv_3290 Shigella flexneri 2002017 hypothetical protein YP_005728621.1 3133590 R 591020 CDS YP_005728622.1 384544559 12319160 3133882..3134700 1 NC_017328.1 hypothetical protein 3134700 12319160 SFxv_3291 Shigella flexneri 2002017 hypothetical protein YP_005728622.1 3133882 D 591020 CDS YP_005728623.1 384544560 12319161 3134970..3135515 1 NC_017328.1 hypothetical protein 3135515 12319161 SFxv_3292 Shigella flexneri 2002017 hypothetical protein YP_005728623.1 3134970 D 591020 CDS YP_005728624.1 384544561 12319162 3135516..3136007 1 NC_017328.1 putative RADC family DNA repair protein 3136007 12319162 SFxv_3293 Shigella flexneri 2002017 putative RADC family DNA repair protein YP_005728624.1 3135516 D 591020 CDS YP_005728625.1 384544562 12319163 3136094..3136315 1 NC_017328.1 YeeT 3136315 12319163 SFxv_3294 Shigella flexneri 2002017 YeeT YP_005728625.1 3136094 D 591020 CDS YP_005728626.1 384544563 12319164 3136395..3136772 1 NC_017328.1 Intergenic-region protein 3136772 12319164 SFxv_3295 Shigella flexneri 2002017 Intergenic-region protein YP_005728626.1 3136395 D 591020 CDS YP_005728627.1 384544564 12319165 3136819..3137196 1 NC_017328.1 hypothetical protein 3137196 12319165 SFxv_3296 Shigella flexneri 2002017 hypothetical protein YP_005728627.1 3136819 D 591020 CDS YP_005728628.1 384544565 12319166 3137193..3137681 1 NC_017328.1 hypothetical protein 3137681 12319166 SFxv_3297 Shigella flexneri 2002017 hypothetical protein YP_005728628.1 3137193 D 591020 CDS YP_005728629.1 384544566 12319167 3137701..3137898 1 NC_017328.1 hypothetical protein 3137898 12319167 SFxv_3298 Shigella flexneri 2002017 hypothetical protein YP_005728629.1 3137701 D 591020 CDS YP_005728630.1 384544567 12319168 3137983..3138825 1 NC_017328.1 hypothetical protein 3138825 12319168 SFxv_3299 Shigella flexneri 2002017 hypothetical protein YP_005728630.1 3137983 D 591020 CDS YP_005728631.1 384544568 12319169 3139557..3139847 1 NC_017328.1 hypothetical protein 3139847 12319169 SFxv_3300 Shigella flexneri 2002017 hypothetical protein YP_005728631.1 3139557 D 591020 CDS YP_005728632.1 384544569 12319170 3140241..3140549 1 NC_017328.1 putative transposase 3140549 12319170 SFxv_3301 Shigella flexneri 2002017 putative transposase YP_005728632.1 3140241 D 591020 CDS YP_005728633.1 384544570 12319171 3140546..3141412 1 NC_017328.1 IS3 orfB 3141412 12319171 SFxv_3302 Shigella flexneri 2002017 IS3 orfB YP_005728633.1 3140546 D 591020 CDS YP_005728634.1 384544571 12319172 complement(3141516..3141983) 1 NC_017328.1 putative tight adherance operon protein 3141983 12319172 SFxv_3303 Shigella flexneri 2002017 putative tight adherance operon protein YP_005728634.1 3141516 R 591020 CDS YP_005728635.1 384544572 12319173 complement(3142049..3142288) 1 NC_017328.1 hypothetical protein 3142288 12319173 SFxv_3304 Shigella flexneri 2002017 hypothetical protein YP_005728635.1 3142049 R 591020 CDS YP_005728636.1 384544573 12319174 complement(3142423..3143028) 1 NC_017328.1 Membrane protein 3143028 12319174 SFxv_3305 Shigella flexneri 2002017 Membrane protein YP_005728636.1 3142423 R 591020 CDS YP_005728637.1 384544574 12319176 3143760..3144023 1 NC_017328.1 putative IS1 encoded protein 3144023 12319176 SFxv_3306 Shigella flexneri 2002017 putative IS1 encoded protein YP_005728637.1 3143760 D 591020 CDS YP_005728638.1 384544575 12319177 complement(3145297..3146883) 1 NC_017328.1 putative permease 3146883 glcA 12319177 glcA Shigella flexneri 2002017 putative permease YP_005728638.1 3145297 R 591020 CDS YP_005728639.1 384544576 12319178 complement(3147238..3149409) 1 NC_017328.1 Malate synthase G 3149409 glcB 12319178 glcB Shigella flexneri 2002017 Malate synthase G YP_005728639.1 3147238 R 591020 CDS YP_005728640.1 384544577 12319179 complement(3149431..3149835) 1 NC_017328.1 hypothetical protein 3149835 glcG 12319179 glcG Shigella flexneri 2002017 hypothetical protein YP_005728640.1 3149431 R 591020 CDS YP_005728641.1 384544578 12319182 3153873..3154643 1 NC_017328.1 Transcriptional activator for glc operon 3154643 glcC 12319182 glcC Shigella flexneri 2002017 Transcriptional activator for glc operon YP_005728641.1 3153873 D 591020 CDS YP_005728642.1 384544579 12319184 3156312..3158000 1 NC_017328.1 putative saframycin Mx1 synthetase B 3158000 12319184 SFxv_3316 Shigella flexneri 2002017 putative saframycin Mx1 synthetase B YP_005728642.1 3156312 D 591020 CDS YP_005728643.1 384544580 12319185 3158015..3158911 1 NC_017328.1 NAD-dependent epimerase/dehydratase 3158911 12319185 SFxv_3317 Shigella flexneri 2002017 NAD-dependent epimerase/dehydratase YP_005728643.1 3158015 D 591020 CDS YP_005728644.1 384544581 12319186 3158944..3159192 1 NC_017328.1 putative acyl carrier protein 3159192 12319186 SFxv_3318 Shigella flexneri 2002017 putative acyl carrier protein YP_005728644.1 3158944 D 591020 CDS YP_005728645.1 384544582 12319187 3159192..3159542 1 NC_017328.1 putative class II aminotransferase 3159542 12319187 SFxv_3319 Shigella flexneri 2002017 putative class II aminotransferase YP_005728645.1 3159192 D 591020 CDS YP_005728646.1 384544583 12319188 3159575..3160363 1 NC_017328.1 putative 7-keto-8-aminopelargonate synthetase-like enzyme 3160363 12319188 SFxv_3320 Shigella flexneri 2002017 putative 7-keto-8-aminopelargonate synthetase-like enzyme YP_005728646.1 3159575 D 591020 CDS YP_005728647.1 384544584 12319189 complement(3160399..3161478) 1 NC_017328.1 putative permease, YjgP/YjgQ family 3161478 12319189 SFxv_3321 Shigella flexneri 2002017 putative permease, YjgP/YjgQ family YP_005728647.1 3160399 R 591020 CDS YP_005728648.1 384544585 12319190 complement(3161475..3162545) 1 NC_017328.1 putative permease 3162545 12319190 SFxv_3322 Shigella flexneri 2002017 putative permease YP_005728648.1 3161475 R 591020 CDS YP_005728649.1 384544586 12319191 complement(3162576..3163136) 1 NC_017328.1 putative transcriptional regulator 3163136 12319191 SFxv_3323 Shigella flexneri 2002017 putative transcriptional regulator YP_005728649.1 3162576 R 591020 CDS YP_005728650.1 384544587 12319192 complement(3163148..3163972) 1 NC_017328.1 putative FOG: TPR repeat protein 3163972 12319192 SFxv_3324 Shigella flexneri 2002017 putative FOG: TPR repeat protein YP_005728650.1 3163148 R 591020 CDS YP_005728651.1 384544588 12319193 complement(3163972..3165321) 1 NC_017328.1 putative Membrane protein involved in the export of O-antigen and teichoic acid 3165321 yghQ 12319193 yghQ Shigella flexneri 2002017 putative Membrane protein involved in the export of O-antigen and teichoic acid YP_005728651.1 3163972 R 591020 CDS YP_005728652.1 384544589 12319194 complement(3165367..3166125) 1 NC_017328.1 ATP-binding protein YghR 3166125 yghR 12319194 yghR Shigella flexneri 2002017 ATP-binding protein YghR YP_005728652.1 3165367 R 591020 CDS YP_005728653.1 384544590 12319195 complement(3166157..3166870) 1 NC_017328.1 putative ATP-binding protein yghS 3166870 yghS 12319195 yghS Shigella flexneri 2002017 putative ATP-binding protein yghS YP_005728653.1 3166157 R 591020 CDS YP_005728654.1 384544591 12319196 3167341..3167736 1 NC_017328.1 putative ATP-binding protein yghT 3167736 yghT 12319196 yghT Shigella flexneri 2002017 putative ATP-binding protein yghT YP_005728654.1 3167341 D 591020 CDS YP_005728655.1 384544592 12319197 complement(3167785..3169284) 1 NC_017328.1 putative phosphate/sulfate permease 3169284 pitB 12319197 pitB Shigella flexneri 2002017 putative phosphate/sulfate permease YP_005728655.1 3167785 R 591020 CDS YP_005728656.1 384544593 12319198 complement(3169576..3171438) 1 NC_017328.1 Bifunctional glutathionylspermidine synthetase/amidase 3171438 gsp 12319198 gsp Shigella flexneri 2002017 Bifunctional glutathionylspermidine synthetase/amidase YP_005728656.1 3169576 R 591020 CDS YP_005728657.1 384544594 12319199 3171592..3172506 1 NC_017328.1 putative glutathione S-transferase YghU 3172506 yghU 12319199 yghU Shigella flexneri 2002017 putative glutathione S-transferase YghU YP_005728657.1 3171592 D 591020 CDS YP_005728658.1 384544595 12319200 complement(3172629..3172877) 1 NC_017328.1 Hydrogenase-2 operon protein hybG 3172877 hybG 12319200 hybG Shigella flexneri 2002017 Hydrogenase-2 operon protein hybG YP_005728658.1 3172629 R 591020 CDS YP_005728659.1 384544596 12319201 complement(3173011..3173352) 1 NC_017328.1 putative hydrogenase nickel incorporation protein hybF 3173352 hybF 12319201 hybF Shigella flexneri 2002017 putative hydrogenase nickel incorporation protein hybF YP_005728659.1 3173011 R 591020 CDS YP_005728660.1 384544597 12319202 complement(3173345..3173833) 1 NC_017328.1 Hydrogenase-2 component 3173833 hybE 12319202 hybE Shigella flexneri 2002017 Hydrogenase-2 component YP_005728660.1 3173345 R 591020 CDS YP_005728661.1 384544598 12319203 complement(3173826..3174320) 1 NC_017328.1 Hydrogenase 2 maturation protease 3174320 hybD 12319203 hybD Shigella flexneri 2002017 Hydrogenase 2 maturation protease YP_005728661.1 3173826 R 591020 CDS YP_005728662.1 384544599 12319204 complement(3174320..3176023) 1 NC_017328.1 Hydrogenase-2 large chain precursor 3176023 hybC 12319204 hybC Shigella flexneri 2002017 Hydrogenase-2 large chain precursor YP_005728662.1 3174320 R 591020 CDS YP_005728663.1 384544600 12319205 complement(3176020..3177198) 1 NC_017328.1 Cytochrome Ni/Fe component of hydrogenase-2 3177198 hybB 12319205 hybB Shigella flexneri 2002017 Cytochrome Ni/Fe component of hydrogenase-2 YP_005728663.1 3176020 R 591020 CDS YP_005728664.1 384544601 12319206 complement(3177188..3178174) 1 NC_017328.1 Hydrogenase-2 operon protein hybA precursor 3178174 hybA 12319206 hybA Shigella flexneri 2002017 Hydrogenase-2 operon protein hybA precursor YP_005728664.1 3177188 R 591020 CDS YP_005728665.1 384544602 12319207 complement(3178177..3179295) 1 NC_017328.1 putative hydrogenase subunit 3179295 hybO 12319207 hybO Shigella flexneri 2002017 putative hydrogenase subunit YP_005728665.1 3178177 R 591020 CDS YP_005728666.1 384544603 12319208 complement(3179484..3179771) 1 NC_017328.1 hypothetical protein 3179771 12319208 SFxv_3341 Shigella flexneri 2002017 hypothetical protein YP_005728666.1 3179484 R 591020 CDS YP_005728667.1 384544604 12319209 complement(3179890..3180816) 1 NC_017328.1 hydrolase 3180816 12319209 SFxv_3342 Shigella flexneri 2002017 hydrolase YP_005728667.1 3179890 R 591020 CDS YP_005728668.1 384544605 12319210 3180934..3181974 1 NC_017328.1 aldo/keto reductase 3181974 yghZ 12319210 yghZ Shigella flexneri 2002017 aldo/keto reductase YP_005728668.1 3180934 D 591020 CDS YP_005728669.1 384544606 12319211 complement(3182014..3182538) 1 NC_017328.1 hypothetical protein 3182538 12319211 SFxv_3344 Shigella flexneri 2002017 hypothetical protein YP_005728669.1 3182014 R 591020 CDS YP_005728670.1 384544607 12319212 3182699..3183583 1 NC_017328.1 Oxidoreductase, short chain dehydrogenase/reductase family 3183583 yghA 12319212 yghA Shigella flexneri 2002017 Oxidoreductase, short chain dehydrogenase/reductase family YP_005728670.1 3182699 D 591020 CDS YP_005728671.1 384544608 12319213 3183759..3184004 1 NC_017328.1 hypothetical protein 3184004 12319213 SFxv_3346 Shigella flexneri 2002017 hypothetical protein YP_005728671.1 3183759 D 591020 CDS YP_005728672.1 384544609 12319214 complement(3183855..3184280) 1 NC_017328.1 Biopolymer transport protein exbD 3184280 exbD 12319214 exbD Shigella flexneri 2002017 Biopolymer transport protein exbD YP_005728672.1 3183855 R 591020 CDS YP_005728673.1 384544610 12319215 complement(3184287..3185021) 1 NC_017328.1 Biopolymer transport protein exbB 3185021 exbB 12319215 exbB Shigella flexneri 2002017 Biopolymer transport protein exbB YP_005728673.1 3184287 R 591020 CDS YP_005728674.1 384544611 12319216 complement(3185014..3185169) 1 NC_017328.1 hypothetical protein 3185169 12319216 SFxv_3350 Shigella flexneri 2002017 hypothetical protein YP_005728674.1 3185014 R 591020 CDS YP_005728675.1 384544612 12319217 3185138..3186460 1 NC_017328.1 Cystathionine beta-lyase 3186460 metC 12319217 metC Shigella flexneri 2002017 Cystathionine beta-lyase YP_005728675.1 3185138 D 591020 CDS YP_005728676.1 384544613 12319218 3186600..3187259 1 NC_017328.1 Inner membrane protein yghB 3187259 yghB 12319218 yghB Shigella flexneri 2002017 Inner membrane protein yghB YP_005728676.1 3186600 D 591020 CDS YP_005728677.1 384544614 12319219 complement(3187299..3188426) 1 NC_017328.1 putative ARAC-type regulatory protein 3188426 yqhC 12319219 yqhC Shigella flexneri 2002017 putative ARAC-type regulatory protein YP_005728677.1 3187299 R 591020 CDS YP_005728679.1 384544615 12319220 3188392..3189555 1 NC_017328.1 Alcohol dehydrogenase yqhD 3189555 yqhD 12319220 yqhD Shigella flexneri 2002017 Alcohol dehydrogenase yqhD YP_005728679.1 3188392 D 591020 CDS YP_005728680.1 384544616 12319221 3189660..3190487 1 NC_017328.1 2,5-diketo-D-gluconate reductase A 3190487 dkgA 12319221 dkgA Shigella flexneri 2002017 2,5-diketo-D-gluconate reductase A YP_005728680.1 3189660 D 591020 CDS YP_005728681.1 384544617 12319222 3190687..3191613 1 NC_017328.1 hypothetical protein 3191613 12319222 SFxv_3357 Shigella flexneri 2002017 hypothetical protein YP_005728681.1 3190687 D 591020 CDS YP_005728682.1 384544618 12319223 3191664..3191921 1 NC_017328.1 putative lipoprotein yqhH precursor 3191921 yqhH 12319223 yqhH Shigella flexneri 2002017 putative lipoprotein yqhH precursor YP_005728682.1 3191664 D 591020 CDS YP_005728683.1 384544619 12319224 complement(3191964..3194183) 1 NC_017328.1 protein ygiQ 3194183 ygiQ 12319224 ygiQ Shigella flexneri 2002017 protein ygiQ YP_005728683.1 3191964 R 591020 CDS YP_005728684.1 384544620 12319225 complement(3194294..3195706) 1 NC_017328.1 Suppressor of ftsI 3195706 ftsP 12319225 ftsP Shigella flexneri 2002017 Suppressor of ftsI YP_005728684.1 3194294 R 591020 CDS YP_005728685.1 384544621 12319226 complement(3195781..3196518) 1 NC_017328.1 1-acyl-sn-glycerol-3-phosphate acyltransferase 3196518 plsC 12319226 plsC Shigella flexneri 2002017 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_005728685.1 3195781 R 591020 CDS YP_005728686.1 384544622 12319227 complement(3196752..3199010) 1 NC_017328.1 DNA topoisomerase 4 subunit A 3199010 parC 12319227 parC Shigella flexneri 2002017 DNA topoisomerase 4 subunit A YP_005728686.1 3196752 R 591020 CDS YP_005728687.1 384544623 12319228 complement(3199556..3200038) 1 NC_017328.1 putative transcriptional regulator 3200038 ygiV 12319228 ygiV Shigella flexneri 2002017 putative transcriptional regulator YP_005728687.1 3199556 R 591020 CDS YP_005728688.1 384544624 12319229 complement(3200091..3200483) 1 NC_017328.1 Protein ygiW precursor 3200483 ygiW 12319229 ygiW Shigella flexneri 2002017 Protein ygiW precursor YP_005728688.1 3200091 R 591020 CDS YP_005728689.1 384544625 12319230 3200635..3201294 1 NC_017328.1 Two component transcriptional regulator, winged helix family precursor 3201294 qseB 12319230 qseB Shigella flexneri 2002017 Two component transcriptional regulator, winged helix family precursor YP_005728689.1 3200635 D 591020 CDS YP_005728690.1 384544626 12319231 3201291..3202565 1 NC_017328.1 putative Sensor protein 3202565 qseC 12319231 qseC Shigella flexneri 2002017 putative Sensor protein YP_005728690.1 3201291 D 591020 CDS YP_005728691.1 384544627 12319232 complement(3202611..3202943) 1 NC_017328.1 Inner membrane protein ygiZ 3202943 ygiZ 12319232 ygiZ Shigella flexneri 2002017 Inner membrane protein ygiZ YP_005728691.1 3202611 R 591020 CDS YP_005728692.1 384544628 12319233 3203262..3203843 1 NC_017328.1 Modulator of drug activity B 3203843 mdaB 12319233 mdaB Shigella flexneri 2002017 Modulator of drug activity B YP_005728692.1 3203262 D 591020 CDS YP_005728693.1 384544629 12319234 3203874..3204188 1 NC_017328.1 hypothetical protein 3204188 12319234 SFxv_3370 Shigella flexneri 2002017 hypothetical protein YP_005728693.1 3203874 D 591020 CDS YP_005728694.1 384544630 12319235 complement(3204236..3206128) 1 NC_017328.1 DNA topoisomerase IV subunit B 3206128 parE 12319235 parE Shigella flexneri 2002017 DNA topoisomerase IV subunit B YP_005728694.1 3204236 R 591020 CDS YP_005728695.1 384544631 12319236 complement(3206157..3206738) 1 NC_017328.1 Esterase yqiA 3206738 yqiA 12319236 yqiA Shigella flexneri 2002017 Esterase yqiA YP_005728695.1 3206157 R 591020 CDS YP_005728696.1 384544632 12319237 complement(3206738..3207565) 1 NC_017328.1 Regulator of lacZ 3207565 cpdA 12319237 cpdA Shigella flexneri 2002017 Regulator of lacZ YP_005728696.1 3206738 R 591020 CDS YP_005728697.1 384544633 12319238 complement(3207590..3208012) 1 NC_017328.1 hypothetical protein 3208012 12319238 SFxv_3374 Shigella flexneri 2002017 hypothetical protein YP_005728697.1 3207590 R 591020 CDS YP_005728698.1 384544634 12319239 complement(3208013..3208642) 1 NC_017328.1 ADP-ribose pyrophosphatase 3208642 nudF 12319239 nudF Shigella flexneri 2002017 ADP-ribose pyrophosphatase YP_005728698.1 3208013 R 591020 CDS YP_005728699.1 384544635 12319240 3208983..3210329 1 NC_017328.1 Outer membrane channel TolC 3210329 tolC 12319240 tolC Shigella flexneri 2002017 Outer membrane channel TolC YP_005728699.1 3208983 D 591020 CDS YP_005728700.1 384544636 12319241 3210477..3211148 1 NC_017328.1 hypothetical protein 3211148 12319241 SFxv_3377 Shigella flexneri 2002017 hypothetical protein YP_005728700.1 3210477 D 591020 CDS YP_005728701.1 384544637 12319242 3211154..3212314 1 NC_017328.1 putative synthetase/amidase 3212314 ygiC 12319242 ygiC Shigella flexneri 2002017 putative synthetase/amidase YP_005728701.1 3211154 D 591020 CDS YP_005728702.1 384544638 12319243 complement(3212352..3213167) 1 NC_017328.1 dioxygenase 3213167 ygiD 12319243 ygiD Shigella flexneri 2002017 dioxygenase YP_005728702.1 3212352 R 591020 CDS YP_005728703.1 384544639 12319244 3213283..3214056 1 NC_017328.1 Zinc transporter zupT 3214056 zupT 12319244 zupT Shigella flexneri 2002017 Zinc transporter zupT YP_005728703.1 3213283 D 591020 CDS YP_005728704.1 384544640 12319245 complement(3214114..3214284) 1 NC_017328.1 hypothetical protein 3214284 12319245 SFxv_3381 Shigella flexneri 2002017 hypothetical protein YP_005728704.1 3214114 R 591020 CDS YP_005728705.1 384544641 12319246 complement(3214545..3215198) 1 NC_017328.1 3,4-dihydroxy-2-butanone 4-phosphate synthase 3215198 ribB 12319246 ribB Shigella flexneri 2002017 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_005728705.1 3214545 R 591020 CDS YP_005728706.1 384544642 12319247 3215512..3215862 1 NC_017328.1 hypothetical protein 3215862 12319247 SFxv_3383 Shigella flexneri 2002017 hypothetical protein YP_005728706.1 3215512 D 591020 CDS YP_005728707.1 384544643 12319248 3216118..3216483 1 NC_017328.1 IS2 ORF1 3216483 12319248 SFxv_3384 Shigella flexneri 2002017 IS2 ORF1 YP_005728707.1 3216118 D 591020 CDS YP_005728708.1 384544644 12319249 3216441..3217292 1 NC_017328.1 IS2 ORF2 3217292 12319249 SFxv_3385 Shigella flexneri 2002017 IS2 ORF2 YP_005728708.1 3216441 D 591020 CDS YP_005728709.1 384544645 12319250 complement(3216486..3216917) 1 NC_017328.1 Insertion element IS2 protein 3216917 12319250 SFxv_3387 Shigella flexneri 2002017 Insertion element IS2 protein YP_005728709.1 3216486 R 591020 CDS YP_005728710.1 384544646 12319252 3218065..3218325 1 NC_017328.1 IS4 ORF 3218325 12319252 SFxv_3389 Shigella flexneri 2002017 IS4 ORF YP_005728710.1 3218065 D 591020 CDS YP_005728711.1 384544647 12319253 3218367..3218669 1 NC_017328.1 hypothetical protein 3218669 12319253 SFxv_3390 Shigella flexneri 2002017 hypothetical protein YP_005728711.1 3218367 D 591020 CDS YP_005728712.1 384544648 12319254 complement(3218712..3218912) 1 NC_017328.1 Glycogen synthesis protein glgS 3218912 glgS 12319254 glgS Shigella flexneri 2002017 Glycogen synthesis protein glgS YP_005728712.1 3218712 R 591020 CDS YP_005728713.1 384544649 12319255 complement(3219105..3219353) 1 NC_017328.1 IS600 ORF2 3219353 12319255 SFxv_3392 Shigella flexneri 2002017 IS600 ORF2 YP_005728713.1 3219105 R 591020 CDS YP_005728714.1 384544650 12319256 3219638..3219931 1 NC_017328.1 IS1 transposase 3219931 12319256 SFxv_3393 Shigella flexneri 2002017 IS1 transposase YP_005728714.1 3219638 D 591020 CDS YP_005728715.1 384544651 12319257 3219965..3220873 1 NC_017328.1 hypothetical protein 3220873 yqiK 12319257 yqiK Shigella flexneri 2002017 hypothetical protein YP_005728715.1 3219965 D 591020 CDS YP_005728716.1 384544652 12319258 3220973..3221224 1 NC_017328.1 hypothetical protein 3221224 12319258 SFxv_3395 Shigella flexneri 2002017 hypothetical protein YP_005728716.1 3220973 D 591020 CDS YP_005728717.1 384544653 12319259 3221724..3221975 1 NC_017328.1 hypothetical protein 3221975 12319259 SFxv_3396 Shigella flexneri 2002017 hypothetical protein YP_005728717.1 3221724 D 591020 CDS YP_005728718.1 384544654 12319260 complement(3222042..3223475) 1 NC_017328.1 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase 3223475 rfaE 12319260 rfaE Shigella flexneri 2002017 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase YP_005728718.1 3222042 R 591020 CDS YP_005728719.1 384544655 12319261 complement(3223523..3226450) 1 NC_017328.1 glutamate-ammonia-ligase adenylyltransferase 3226450 glnE 12319261 glnE Shigella flexneri 2002017 glutamate-ammonia-ligase adenylyltransferase YP_005728719.1 3223523 R 591020 CDS YP_005728720.1 384544656 12319262 complement(3226386..3227687) 1 NC_017328.1 adenylate cyclase 3227687 ygiF 12319262 ygiF Shigella flexneri 2002017 adenylate cyclase YP_005728720.1 3226386 R 591020 CDS YP_005728721.1 384544657 12319263 3227929..3228549 1 NC_017328.1 putative signal transduction protein 3228549 htrG 12319263 htrG Shigella flexneri 2002017 putative signal transduction protein YP_005728721.1 3227929 D 591020 CDS YP_005728722.1 384544658 12319264 3228613..3229851 1 NC_017328.1 Multifunctional CCA protein 3229851 cca 12319264 cca Shigella flexneri 2002017 Multifunctional CCA protein YP_005728722.1 3228613 D 591020 CDS YP_005728723.1 384544659 12319265 complement(3230014..3230835) 1 NC_017328.1 undecaprenyl-diphosphatase 3230835 bacA 12319265 bacA Shigella flexneri 2002017 undecaprenyl-diphosphatase YP_005728723.1 3230014 R 591020 CDS YP_005728724.1 384544660 12319266 complement(3230926..3231297) 1 NC_017328.1 Dihydroneopterin aldolase 3231297 folB 12319266 folB Shigella flexneri 2002017 Dihydroneopterin aldolase YP_005728724.1 3230926 R 591020 CDS YP_005728725.1 384544661 12319268 complement(3231960..3232961) 1 NC_017328.1 putative LYSR-type transcriptional regulator 3232961 ttdR 12319268 ttdR Shigella flexneri 2002017 putative LYSR-type transcriptional regulator YP_005728725.1 3231960 R 591020 CDS YP_005728726.1 384544662 12319269 3232992..3233114 1 NC_017328.1 hypothetical protein 3233114 12319269 SFxv_3406 Shigella flexneri 2002017 hypothetical protein YP_005728726.1 3232992 D 591020 CDS YP_005728727.1 384544663 12319270 3233168..3233980 1 NC_017328.1 L(+)-tartrate dehydratase subunit alpha 3233980 ttdA 12319270 ttdA Shigella flexneri 2002017 L(+)-tartrate dehydratase subunit alpha YP_005728727.1 3233168 D 591020 CDS YP_005728728.1 384544664 12319271 3234008..3234613 1 NC_017328.1 L(+)-tartrate dehydratase subunit beta 3234613 ttdB 12319271 ttdB Shigella flexneri 2002017 L(+)-tartrate dehydratase subunit beta YP_005728728.1 3234008 D 591020 CDS YP_005728729.1 384544665 12319272 3234661..3236124 1 NC_017328.1 L-tartrate/succinate antiporter 3236124 ttdT 12319272 ttdT Shigella flexneri 2002017 L-tartrate/succinate antiporter YP_005728729.1 3234661 D 591020 CDS YP_005728730.1 384544666 12319273 complement(3236167..3237180) 1 NC_017328.1 putative O-sialoglycoprotein endopeptidase 3237180 ygjD 12319273 ygjD Shigella flexneri 2002017 putative O-sialoglycoprotein endopeptidase YP_005728730.1 3236167 R 591020 CDS YP_005728731.1 384544667 12319274 3237418..3237633 1 NC_017328.1 30S ribosomal protein S21 3237633 rpsU 12319274 rpsU Shigella flexneri 2002017 30S ribosomal protein S21 YP_005728731.1 3237418 D 591020 CDS YP_005728732.1 384544668 12319275 3237744..3239489 1 NC_017328.1 DNA primase 3239489 dnaG 12319275 dnaG Shigella flexneri 2002017 DNA primase YP_005728732.1 3237744 D 591020 CDS YP_005728733.1 384544669 12319276 3239684..3241525 1 NC_017328.1 putative DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) 3241525 rpoD 12319276 rpoD Shigella flexneri 2002017 putative DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_005728733.1 3239684 D 591020 CDS YP_005728734.1 384544670 12319277 3241663..3243009 1 NC_017328.1 IS4 ORF 3243009 12319277 SFxv_3414 Shigella flexneri 2002017 IS4 ORF YP_005728734.1 3241663 D 591020 CDS YP_005728735.1 384544671 12319278 complement(3243194..3243547) 1 NC_017328.1 G/U mismatch-specific DNA glycosylase 3243547 mug 12319278 mug Shigella flexneri 2002017 G/U mismatch-specific DNA glycosylase YP_005728735.1 3243194 R 591020 CDS YP_005728736.1 384544672 12319281 3244823..3245446 1 NC_017328.1 putative transcriptional regulator 3245446 yqjI 12319281 yqjI Shigella flexneri 2002017 putative transcriptional regulator YP_005728736.1 3244823 D 591020 CDS YP_005728737.1 384544673 12319283 3247511..3248917 1 NC_017328.1 putrescine--2-oxoglutarate aminotransferase 3248917 ygjG 12319283 ygjG Shigella flexneri 2002017 putrescine--2-oxoglutarate aminotransferase YP_005728737.1 3247511 D 591020 CDS YP_005728738.1 384544674 12319285 3249508..3250491 1 NC_017328.1 Regulator of ebg operon 3250491 ebgR 12319285 ebgR Shigella flexneri 2002017 Regulator of ebg operon YP_005728738.1 3249508 D 591020 CDS YP_005728739.1 384544675 12319286 3250674..3253760 1 NC_017328.1 Evolved beta-D-galactosidase, alpha subunit 3253760 ebgA 12319286 ebgA Shigella flexneri 2002017 Evolved beta-D-galactosidase, alpha subunit YP_005728739.1 3250674 D 591020 CDS YP_005728740.1 384544676 12319287 3253757..3254206 1 NC_017328.1 Evolved beta-D-galactosidase, beta subunit 3254206 ebgC 12319287 ebgC Shigella flexneri 2002017 Evolved beta-D-galactosidase, beta subunit YP_005728740.1 3253757 D 591020 CDS YP_005728741.1 384544677 12319288 3254269..3255702 1 NC_017328.1 putative oxidoreductase 3255702 ygjI 12319288 ygjI Shigella flexneri 2002017 putative oxidoreductase YP_005728741.1 3254269 D 591020 CDS YP_005728742.1 384544678 12319290 3256924..3259275 1 NC_017328.1 putative isomerase 3259275 ygjK 12319290 ygjK Shigella flexneri 2002017 putative isomerase YP_005728742.1 3256924 D 591020 CDS YP_005728743.1 384544679 12319291 3259501..3261519 1 NC_017328.1 putative NADPH dehydrogenase 3261519 fadH 12319291 fadH Shigella flexneri 2002017 putative NADPH dehydrogenase YP_005728743.1 3259501 D 591020 CDS YP_005728744.1 384544680 12319292 complement(3261564..3261980) 1 NC_017328.1 putative HTH-type transcriptional regulator ygjM 3261980 ygjM 12319292 ygjM Shigella flexneri 2002017 putative HTH-type transcriptional regulator ygjM YP_005728744.1 3261564 R 591020 CDS YP_005728745.1 384544681 12319293 complement(3261977..3262291) 1 NC_017328.1 hypothetical protein 3262291 ygjN 12319293 ygjN Shigella flexneri 2002017 hypothetical protein YP_005728745.1 3261977 R 591020 CDS YP_005728746.1 384544682 12319294 complement(3262576..3264021) 1 NC_017328.1 hypothetical protein 3264021 12319294 SFxv_3432 Shigella flexneri 2002017 hypothetical protein YP_005728746.1 3262576 R 591020 CDS YP_005728747.1 384544683 12319295 3263761..3264300 1 NC_017328.1 hypothetical protein 3264300 12319295 SFxv_3431 Shigella flexneri 2002017 hypothetical protein YP_005728747.1 3263761 D 591020 CDS YP_005728748.1 384544684 12319296 3264377..3265069 1 NC_017328.1 hypothetical protein 3265069 ygjQ 12319296 ygjQ Shigella flexneri 2002017 hypothetical protein YP_005728748.1 3264377 D 591020 CDS YP_005728749.1 384544685 12319297 3265130..3266146 1 NC_017328.1 putative dehydrogenases-like protein 3266146 ygjR 12319297 ygjR Shigella flexneri 2002017 putative dehydrogenases-like protein YP_005728749.1 3265130 D 591020 CDS YP_005728750.1 384544686 12319298 3266417..3267382 1 NC_017328.1 putative Membrane protein TerC, possibly involved in tellurium resistance 3267382 alx 12319298 alx Shigella flexneri 2002017 putative Membrane protein TerC, possibly involved in tellurium resistance YP_005728750.1 3266417 D 591020 CDS YP_005728751.1 384544687 12319299 3267978..3269222 1 NC_017328.1 Serine/threonine transporter sstT (Na(+)/serine-threonine symporter) 3269222 sstT 12319299 sstT Shigella flexneri 2002017 Serine/threonine transporter sstT (Na(+)/serine-threonine symporter) YP_005728751.1 3267978 D 591020 CDS YP_005728752.1 384544688 12319300 complement(3269227..3269778) 1 NC_017328.1 putative inner membrane protein 3269778 ygjV 12319300 ygjV Shigella flexneri 2002017 putative inner membrane protein YP_005728752.1 3269227 R 591020 CDS YP_005728753.1 384544689 12319301 complement(3269861..3271348) 1 NC_017328.1 altronate hydrolase 3271348 uxaA 12319301 uxaA Shigella flexneri 2002017 altronate hydrolase YP_005728753.1 3269861 R 591020 CDS YP_005728754.1 384544690 12319302 complement(3271363..3272775) 1 NC_017328.1 uronate isomerase 3272775 uxaC 12319302 uxaC Shigella flexneri 2002017 uronate isomerase YP_005728754.1 3271363 R 591020 CDS YP_005728755.1 384544691 12319303 3273091..3274557 1 NC_017328.1 Transport of hexuronates 3274557 exuT 12319303 exuT Shigella flexneri 2002017 Transport of hexuronates YP_005728755.1 3273091 D 591020 CDS YP_005728756.1 384544692 12319304 complement(3274645..3275733) 1 NC_017328.1 putative pilus biogenesis initiator protein 3275733 12319304 SFxv_3441 Shigella flexneri 2002017 putative pilus biogenesis initiator protein YP_005728756.1 3274645 R 591020 CDS YP_005728757.1 384544693 12319305 complement(3275730..3278006) 1 NC_017328.1 Outer membrane fimbrial user protein 3278006 12319305 SFxv_3442 Shigella flexneri 2002017 Outer membrane fimbrial user protein YP_005728757.1 3275730 R 591020 CDS YP_005728758.1 384544694 12319306 3278081..3278584 1 NC_017328.1 IS1 orfB 3278584 12319306 SFxv_3443 Shigella flexneri 2002017 IS1 orfB YP_005728758.1 3278081 D 591020 CDS YP_005728759.1 384544695 12319307 3278692..3279468 1 NC_017328.1 Exu regulon transcriptional regulator 3279468 exuR 12319307 exuR Shigella flexneri 2002017 Exu regulon transcriptional regulator YP_005728759.1 3278692 D 591020 CDS YP_005728760.1 384544696 12319308 3279813..3280475 1 NC_017328.1 putative DedA family membrane protein 3280475 yqjA 12319308 yqjA Shigella flexneri 2002017 putative DedA family membrane protein YP_005728760.1 3279813 D 591020 CDS YP_005728761.1 384544697 12319309 3280479..3280862 1 NC_017328.1 hypothetical protein 3280862 12319309 SFxv_3446 Shigella flexneri 2002017 hypothetical protein YP_005728761.1 3280479 D 591020 CDS YP_005728762.1 384544698 12319310 3281009..3281443 1 NC_017328.1 hypothetical protein 3281443 12319310 SFxv_3447 Shigella flexneri 2002017 hypothetical protein YP_005728762.1 3281009 D 591020 CDS YP_005728763.1 384544699 12319311 3281401..3281706 1 NC_017328.1 hypothetical protein 3281706 12319311 SFxv_3448 Shigella flexneri 2002017 hypothetical protein YP_005728763.1 3281401 D 591020 CDS YP_005728764.1 384544700 12319312 3281709..3282113 1 NC_017328.1 Inner membrane protein yqjE 3282113 yqjE 12319312 yqjE Shigella flexneri 2002017 Inner membrane protein yqjE YP_005728764.1 3281709 D 591020 CDS YP_005728765.1 384544701 12319313 3282103..3282402 1 NC_017328.1 hypothetical protein 3282402 12319313 SFxv_3450 Shigella flexneri 2002017 hypothetical protein YP_005728765.1 3282103 D 591020 CDS YP_005728766.1 384544702 12319314 3282498..3282884 1 NC_017328.1 hypothetical protein 3282884 12319314 SFxv_3451 Shigella flexneri 2002017 hypothetical protein YP_005728766.1 3282498 D 591020 CDS YP_005728767.1 384544703 12319315 3282954..3283940 1 NC_017328.1 putative transferase 3283940 yqjG 12319315 yqjG Shigella flexneri 2002017 putative transferase YP_005728767.1 3282954 D 591020 CDS YP_005728768.1 384544704 12319316 3284212..3284601 1 NC_017328.1 putative cytochrome 3284601 yhaH 12319316 yhaH Shigella flexneri 2002017 putative cytochrome YP_005728768.1 3284212 D 591020 CDS YP_005728769.1 384544705 12319317 complement(3284808..3285704) 1 NC_017328.1 putative LYSR-type transcriptional regulator 3285704 yhaJ 12319317 yhaJ Shigella flexneri 2002017 putative LYSR-type transcriptional regulator YP_005728769.1 3284808 R 591020 CDS YP_005728770.1 384544706 12319318 3285809..3286510 1 NC_017328.1 Pirin-like protein yhaK 3286510 yhaK 12319318 yhaK Shigella flexneri 2002017 Pirin-like protein yhaK YP_005728770.1 3285809 D 591020 CDS YP_005728771.1 384544707 12319319 3286527..3286697 1 NC_017328.1 hypothetical protein 3286697 12319319 SFxv_3456 Shigella flexneri 2002017 hypothetical protein YP_005728771.1 3286527 D 591020 CDS YP_005728772.1 384544708 12319320 complement(3286909..3288219) 1 NC_017328.1 hypothetical protein 3288219 12319320 SFxv_3457 Shigella flexneri 2002017 hypothetical protein YP_005728772.1 3286909 R 591020 CDS YP_005728773.1 384544709 12319321 complement(3288247..3289578) 1 NC_017328.1 putative transport system permease 3289578 yhaO 12319321 yhaO Shigella flexneri 2002017 putative transport system permease YP_005728773.1 3288247 R 591020 CDS YP_005728774.1 384544710 12319322 complement(3289853..3291223) 1 NC_017328.1 putative L-serine deaminase 3291223 tdcG 12319322 tdcG Shigella flexneri 2002017 putative L-serine deaminase YP_005728774.1 3289853 R 591020 CDS YP_005728775.1 384544711 12319323 complement(3291289..3291741) 1 NC_017328.1 hypothetical protein 3291741 12319323 SFxv_3460 Shigella flexneri 2002017 hypothetical protein YP_005728775.1 3291289 R 591020 CDS YP_005728776.1 384544712 12319324 complement(3291692..3293986) 1 NC_017328.1 Keto-acid formate acetyltransferase 3293986 tdcE 12319324 tdcE Shigella flexneri 2002017 Keto-acid formate acetyltransferase YP_005728776.1 3291692 R 591020 CDS YP_005728777.1 384544713 12319325 complement(3294020..3295240) 1 NC_017328.1 putative kinase 3295240 tdcD 12319325 tdcD Shigella flexneri 2002017 putative kinase YP_005728777.1 3294020 R 591020 CDS YP_005728778.1 384544714 12319326 complement(3295254..3296585) 1 NC_017328.1 Threonine/serine transporter tdcC (H(+)/threonine-serine symporter) 3296585 tdcC 12319326 tdcC Shigella flexneri 2002017 Threonine/serine transporter tdcC (H(+)/threonine-serine symporter) YP_005728778.1 3295254 R 591020 CDS YP_005728779.1 384544715 12319327 complement(3296607..3297596) 1 NC_017328.1 Threonine dehydratase catabolic 3297596 tdcB 12319327 tdcB Shigella flexneri 2002017 Threonine dehydratase catabolic YP_005728779.1 3296607 R 591020 CDS YP_005728780.1 384544716 12319328 complement(3297695..3298633) 1 NC_017328.1 HTH-type transcriptional regulator tdcA 3298633 tdcA 12319328 tdcA Shigella flexneri 2002017 HTH-type transcriptional regulator tdcA YP_005728780.1 3297695 R 591020 CDS YP_005728781.1 384544717 12319329 3298823..3299167 1 NC_017328.1 Threonine dehydratase operon activator protein 3299167 tdcR 12319329 tdcR Shigella flexneri 2002017 Threonine dehydratase operon activator protein YP_005728781.1 3298823 D 591020 CDS YP_005728782.1 384544718 12319332 3301219..3301383 1 NC_017328.1 hypothetical protein 3301383 12319332 SFxv_3469 Shigella flexneri 2002017 hypothetical protein YP_005728782.1 3301219 D 591020 CDS YP_005728783.1 384544719 12319333 3301774..3302253 1 NC_017328.1 hypothetical protein 3302253 12319333 SFxv_3470 Shigella flexneri 2002017 hypothetical protein YP_005728783.1 3301774 D 591020 CDS YP_005728784.1 384544720 12319334 complement(3302181..3303407) 1 NC_017328.1 glycerate kinase 3303407 garK 12319334 garK Shigella flexneri 2002017 glycerate kinase YP_005728784.1 3302181 R 591020 CDS YP_005728785.1 384544721 12319335 complement(3303423..3304229) 1 NC_017328.1 putative dehydrogenase 3304229 garR 12319335 garR Shigella flexneri 2002017 putative dehydrogenase YP_005728785.1 3303423 R 591020 CDS YP_005728786.1 384544722 12319337 complement(3305130..3306464) 1 NC_017328.1 putative galactarate transporter 3306464 garP 12319337 garP Shigella flexneri 2002017 putative galactarate transporter YP_005728786.1 3305130 R 591020 CDS YP_005728787.1 384544723 12319338 3306673..3306792 1 NC_017328.1 hypothetical protein 3306792 12319338 SFxv_3475 Shigella flexneri 2002017 hypothetical protein YP_005728787.1 3306673 D 591020 CDS YP_005728788.1 384544724 12319339 3306839..3308410 1 NC_017328.1 putative hydrolase 3308410 garD 12319339 garD Shigella flexneri 2002017 putative hydrolase YP_005728788.1 3306839 D 591020 CDS YP_005728789.1 384544725 12319340 complement(3308462..3309286) 1 NC_017328.1 putative DEOR-type transcriptional regulator of aga operon 3309286 agaR 12319340 agaR Shigella flexneri 2002017 putative DEOR-type transcriptional regulator of aga operon YP_005728789.1 3308462 R 591020 CDS YP_005728790.1 384544726 12319341 3309535..3310815 1 NC_017328.1 putative tagatose 6-phosphate kinase 2 3310815 kbaZ 12319341 kbaZ Shigella flexneri 2002017 putative tagatose 6-phosphate kinase 2 YP_005728790.1 3309535 D 591020 CDS YP_005728791.1 384544727 12319342 3310802..3311311 1 NC_017328.1 PTS system, cytoplasmic, N-acetylgalactosamine-specific IIB component 2 3311311 agaV 12319342 agaV Shigella flexneri 2002017 PTS system, cytoplasmic, N-acetylgalactosamine-specific IIB component 2 YP_005728791.1 3310802 D 591020 CDS YP_005728792.1 384544728 12319343 3311322..3312779 1 NC_017328.1 PTS system N-acetylgalactosamine-specific transporter subunit IID 3312779 12319343 SFxv_3480 Shigella flexneri 2002017 PTS system N-acetylgalactosamine-specific transporter subunit IID YP_005728792.1 3311322 D 591020 CDS YP_005728793.1 384544729 12319344 3312957..3313391 1 NC_017328.1 PTS system fructose subfamily transporter subunit IIA 3313391 12319344 SFxv_3481 Shigella flexneri 2002017 PTS system fructose subfamily transporter subunit IIA YP_005728793.1 3312957 D 591020 CDS YP_005728794.1 384544730 12319345 3313388..3313831 1 NC_017328.1 N-acetylglucosamine-6-phosphate deacetylase 3313831 12319345 SFxv_3482 Shigella flexneri 2002017 N-acetylglucosamine-6-phosphate deacetylase YP_005728794.1 3313388 D 591020 CDS YP_005728795.1 384544731 12319346 3314054..3314557 1 NC_017328.1 IS1 orfB 3314557 12319346 SFxv_3483 Shigella flexneri 2002017 IS1 orfB YP_005728795.1 3314054 D 591020 CDS YP_005728796.1 384544732 12319347 3314579..3314773 1 NC_017328.1 PTS system mannose/fructose/sorbose family transporter subunit IIB 3314773 agaB 12319347 agaB Shigella flexneri 2002017 PTS system mannose/fructose/sorbose family transporter subunit IIB YP_005728796.1 3314579 D 591020 CDS YP_005728797.1 384544733 12319348 3314812..3315615 1 NC_017328.1 N-acetylgalactosamine-specific transport IIC component 1 3315615 agaC 12319348 agaC Shigella flexneri 2002017 N-acetylgalactosamine-specific transport IIC component 1 YP_005728797.1 3314812 D 591020 CDS YP_005728798.1 384544734 12319349 3315605..3316396 1 NC_017328.1 N-acetylgalactosamine permease IID component 3316396 agaD 12319349 agaD Shigella flexneri 2002017 N-acetylgalactosamine permease IID component YP_005728798.1 3315605 D 591020 CDS YP_005728799.1 384544735 12319350 3316397..3317152 1 NC_017328.1 Glucosamine/galactosamine-6-phosphate isomerase 3317152 agaI 12319350 agaI Shigella flexneri 2002017 Glucosamine/galactosamine-6-phosphate isomerase YP_005728799.1 3316397 D 591020 CDS YP_005728800.1 384544736 12319351 complement(3317661..3318164) 1 NC_017328.1 IS1 orfB 3318164 12319351 SFxv_3488 Shigella flexneri 2002017 IS1 orfB YP_005728800.1 3317661 R 591020 CDS YP_005728801.1 384544737 12319352 3318278..3318418 1 NC_017328.1 IS600 ORF2 3318418 12319352 SFxv_3489 Shigella flexneri 2002017 IS600 ORF2 YP_005728801.1 3318278 D 591020 CDS YP_005728802.1 384544738 12319353 3318567..3318914 1 NC_017328.1 Fimbrial protein 3318914 yraH 12319353 yraH Shigella flexneri 2002017 Fimbrial protein YP_005728802.1 3318567 D 591020 CDS YP_005728803.1 384544739 12319354 3318994..3319689 1 NC_017328.1 putative chaperone 3319689 yraI 12319354 yraI Shigella flexneri 2002017 putative chaperone YP_005728803.1 3318994 D 591020 CDS YP_005728804.1 384544740 12319357 complement(3322315..3322680) 1 NC_017328.1 IS2 ORF1 3322680 12319357 SFxv_3496 Shigella flexneri 2002017 IS2 ORF1 YP_005728804.1 3322315 R 591020 CDS YP_005728805.1 384544741 12319358 3323579..3324670 1 NC_017328.1 putative fimbrial protein 3324670 yraK 12319358 yraK Shigella flexneri 2002017 putative fimbrial protein YP_005728805.1 3323579 D 591020 CDS YP_005728806.1 384544742 12319359 complement(3324713..3325573) 1 NC_017328.1 hypothetical protein 3325573 12319359 SFxv_3499 Shigella flexneri 2002017 hypothetical protein YP_005728806.1 3324713 R 591020 CDS YP_005728807.1 384544743 12319360 3325608..3327674 1 NC_017328.1 putative glycosylase 3327674 yraM 12319360 yraM Shigella flexneri 2002017 putative glycosylase YP_005728807.1 3325608 D 591020 CDS YP_005728808.1 384544744 12319361 3327632..3328027 1 NC_017328.1 hypothetical protein 3328027 12319361 SFxv_3501 Shigella flexneri 2002017 hypothetical protein YP_005728808.1 3327632 D 591020 CDS YP_005728809.1 384544745 12319362 3328047..3328637 1 NC_017328.1 DnaA initiator-associating protein diaA 3328637 diaA 12319362 diaA Shigella flexneri 2002017 DnaA initiator-associating protein diaA YP_005728809.1 3328047 D 591020 CDS YP_005728810.1 384544746 12319363 3328647..3329222 1 NC_017328.1 hypothetical protein 3329222 yraP 12319363 yraP Shigella flexneri 2002017 hypothetical protein YP_005728810.1 3328647 D 591020 CDS YP_005728811.1 384544747 12319364 complement(3329336..3330376) 1 NC_017328.1 putative permease 3330376 yraQ 12319364 yraQ Shigella flexneri 2002017 putative permease YP_005728811.1 3329336 R 591020 CDS YP_005728812.1 384544748 12319365 complement(3330449..3331129) 1 NC_017328.1 hypothetical protein 3331129 12319365 SFxv_3505 Shigella flexneri 2002017 hypothetical protein YP_005728812.1 3330449 R 591020 CDS YP_005728813.1 384544749 12319366 3331170..3331730 1 NC_017328.1 hypothetical protein 3331730 12319366 SFxv_3506 Shigella flexneri 2002017 hypothetical protein YP_005728813.1 3331170 D 591020 CDS YP_005728814.1 384544750 12319367 complement(3331710..3332153) 1 NC_017328.1 hypothetical protein 3332153 yhbP 12319367 yhbP Shigella flexneri 2002017 hypothetical protein YP_005728814.1 3331710 R 591020 CDS YP_005728815.1 384544751 12319368 3332195..3332506 1 NC_017328.1 endonuclease 3332506 yhbQ 12319368 yhbQ Shigella flexneri 2002017 endonuclease YP_005728815.1 3332195 D 591020 CDS YP_005728816.1 384544752 12319369 complement(3332493..3332996) 1 NC_017328.1 putative acetyltransferase yhbS 3332996 yhbS 12319369 yhbS Shigella flexneri 2002017 putative acetyltransferase yhbS YP_005728816.1 3332493 R 591020 CDS YP_005728817.1 384544753 12319370 complement(3332990..3333514) 1 NC_017328.1 hypothetical protein 3333514 12319370 SFxv_3510 Shigella flexneri 2002017 hypothetical protein YP_005728817.1 3332990 R 591020 CDS YP_005728818.1 384544754 12319371 3333723..3334718 1 NC_017328.1 putative collagenase 3334718 yhbU 12319371 yhbU Shigella flexneri 2002017 putative collagenase YP_005728818.1 3333723 D 591020 CDS YP_005728819.1 384544755 12319372 3334709..3335605 1 NC_017328.1 Peptidase U32 3335605 yhbV 12319372 yhbV Shigella flexneri 2002017 Peptidase U32 YP_005728819.1 3334709 D 591020 CDS YP_005728820.1 384544756 12319373 3335686..3336693 1 NC_017328.1 hypothetical protein 3336693 12319373 SFxv_3513 Shigella flexneri 2002017 hypothetical protein YP_005728820.1 3335686 D 591020 CDS YP_005728821.1 384544757 12319374 complement(3336811..3337971) 1 NC_017328.1 Tryptophan-specific transport protein 3337971 mtr 12319374 mtr Shigella flexneri 2002017 Tryptophan-specific transport protein YP_005728821.1 3336811 R 591020 CDS YP_005728822.1 384544758 12319375 3338071..3338208 1 NC_017328.1 hypothetical protein 3338208 12319375 SFxv_3515 Shigella flexneri 2002017 hypothetical protein YP_005728822.1 3338071 D 591020 CDS YP_005728823.1 384544759 12319376 complement(3338209..3340164) 1 NC_017328.1 cold-shock DEAD-box protein A 3340164 deaD 12319376 deaD Shigella flexneri 2002017 cold-shock DEAD-box protein A YP_005728823.1 3338209 R 591020 CDS YP_005728824.1 384544760 12319377 complement(3340278..3341162) 1 NC_017328.1 Lipoprotein nlpI precursor 3341162 nlpI 12319377 nlpI Shigella flexneri 2002017 Lipoprotein nlpI precursor YP_005728824.1 3340278 R 591020 CDS YP_005728825.1 384544761 12319378 complement(3341271..3343475) 1 NC_017328.1 polynucleotide phosphorylase 3343475 pnp 12319378 pnp Shigella flexneri 2002017 polynucleotide phosphorylase YP_005728825.1 3341271 R 591020 CDS YP_005728826.1 384544762 12319379 complement(3343653..3343922) 1 NC_017328.1 30S ribosomal protein S15 3343922 rpsO 12319379 rpsO Shigella flexneri 2002017 30S ribosomal protein S15 YP_005728826.1 3343653 R 591020 CDS YP_005728827.1 384544763 12319380 complement(3344071..3345015) 1 NC_017328.1 tRNA pseudouridine synthase B 3345015 truB 12319380 truB Shigella flexneri 2002017 tRNA pseudouridine synthase B YP_005728827.1 3344071 R 591020 CDS YP_005728828.1 384544764 12319381 complement(3345015..3345416) 1 NC_017328.1 Ribosome-binding factor A 3345416 rbfA 12319381 rbfA Shigella flexneri 2002017 Ribosome-binding factor A YP_005728828.1 3345015 R 591020 CDS YP_005728829.1 384544765 12319382 complement(3345580..3348228) 1 NC_017328.1 translation initiation factor IF-2 3348228 infB 12319382 infB Shigella flexneri 2002017 translation initiation factor IF-2 YP_005728829.1 3345580 R 591020 CDS YP_005728830.1 384544766 12319383 complement(3348253..3349740) 1 NC_017328.1 Transcription elongation protein nusA 3349740 nusA 12319383 nusA Shigella flexneri 2002017 Transcription elongation protein nusA YP_005728830.1 3348253 R 591020 CDS YP_005728831.1 384544767 12319384 complement(3349768..3350226) 1 NC_017328.1 hypothetical protein 3350226 12319384 SFxv_3524 Shigella flexneri 2002017 hypothetical protein YP_005728831.1 3349768 R 591020 CDS YP_005728832.1 384544768 12319386 3350619..3350765 1 NC_017328.1 hypothetical protein 3350765 12319386 SFxv_3525 Shigella flexneri 2002017 hypothetical protein YP_005728832.1 3350619 D 591020 CDS YP_005728833.1 384544769 12319387 3350851..3352194 1 NC_017328.1 argininosuccinate synthase 3352194 argG 12319387 argG Shigella flexneri 2002017 argininosuccinate synthase YP_005728833.1 3350851 D 591020 CDS YP_005728834.1 384544770 12319388 complement(3352202..3353200) 1 NC_017328.1 Sulfatase precursor 3353200 yhbX 12319388 yhbX Shigella flexneri 2002017 Sulfatase precursor YP_005728834.1 3352202 R 591020 CDS YP_005728835.1 384544771 12319390 complement(3354388..3354768) 1 NC_017328.1 Preprotein translocase IISP family, auxillary membrane component 3354768 secG 12319390 secG Shigella flexneri 2002017 Preprotein translocase IISP family, auxillary membrane component YP_005728835.1 3354388 R 591020 CDS YP_005728836.1 384544772 12319391 complement(3354948..3356285) 1 NC_017328.1 phosphoglucosamine mutase 3356285 glmM 12319391 glmM Shigella flexneri 2002017 phosphoglucosamine mutase YP_005728836.1 3354948 R 591020 CDS YP_005728837.1 384544773 12319392 complement(3356278..3357126) 1 NC_017328.1 7,8-dihydropteroate synthase 3357126 folP 12319392 folP Shigella flexneri 2002017 7,8-dihydropteroate synthase YP_005728837.1 3356278 R 591020 CDS YP_005728838.1 384544774 12319393 complement(3357216..3359150) 1 NC_017328.1 Cell division protease ftsH 3359150 hflB 12319393 hflB Shigella flexneri 2002017 Cell division protease ftsH YP_005728838.1 3357216 R 591020 CDS YP_005728839.1 384544775 12319394 complement(3359250..3359879) 1 NC_017328.1 Ribosomal RNA large subunit methyltransferase J 3359879 rrmJ 12319394 rrmJ Shigella flexneri 2002017 Ribosomal RNA large subunit methyltransferase J YP_005728839.1 3359250 R 591020 CDS YP_005728840.1 384544776 12319395 3360005..3360298 1 NC_017328.1 RNA-binding protein yhbY 3360298 yhbY 12319395 yhbY Shigella flexneri 2002017 RNA-binding protein yhbY YP_005728840.1 3360005 D 591020 CDS YP_005728841.1 384544777 12319396 complement(3360454..3360930) 1 NC_017328.1 Transcription elongation factor greA 3360930 greA 12319396 greA Shigella flexneri 2002017 Transcription elongation factor greA YP_005728841.1 3360454 R 591020 CDS YP_005728842.1 384544778 12319397 3361178..3362611 1 NC_017328.1 D-alanyl-D-alanine carboxypeptidase, fraction B, penicillin-binding protein 4 3362611 dacB 12319397 dacB Shigella flexneri 2002017 D-alanyl-D-alanine carboxypeptidase, fraction B, penicillin-binding protein 4 YP_005728842.1 3361178 D 591020 CDS YP_005728843.1 384544779 12319398 complement(3362797..3363969) 1 NC_017328.1 GTPase involved in cell partioning and DNA repair 3363969 obgE 12319398 obgE Shigella flexneri 2002017 GTPase involved in cell partioning and DNA repair YP_005728843.1 3362797 R 591020 CDS YP_005728844.1 384544780 12319399 complement(3363985..3364950) 1 NC_017328.1 putative inner membrane transporter yhbE 3364950 yhbE 12319399 yhbE Shigella flexneri 2002017 putative inner membrane transporter yhbE YP_005728844.1 3363985 R 591020 CDS YP_005728845.1 384544781 12319400 complement(3365077..3365334) 1 NC_017328.1 50S ribosomal protein L27 3365334 rpmA 12319400 rpmA Shigella flexneri 2002017 50S ribosomal protein L27 YP_005728845.1 3365077 R 591020 CDS YP_005728846.1 384544782 12319401 complement(3365355..3365666) 1 NC_017328.1 50S ribosomal protein L21 3365666 rplU 12319401 rplU Shigella flexneri 2002017 50S ribosomal protein L21 YP_005728846.1 3365355 R 591020 CDS YP_005728847.1 384544783 12319402 3365924..3366895 1 NC_017328.1 octaprenyl-diphosphate synthase 3366895 ispB 12319402 ispB Shigella flexneri 2002017 octaprenyl-diphosphate synthase YP_005728847.1 3365924 D 591020 CDS YP_005728848.1 384544784 12319403 3367122..3367400 1 NC_017328.1 Regulatory factor of maltose metabolism 3367400 sfsB 12319403 sfsB Shigella flexneri 2002017 Regulatory factor of maltose metabolism YP_005728848.1 3367122 D 591020 CDS YP_005728849.1 384544785 12319404 complement(3367448..3368707) 1 NC_017328.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase 3368707 murA 12319404 murA Shigella flexneri 2002017 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_005728849.1 3367448 R 591020 CDS YP_005728850.1 384544786 12319405 complement(3368762..3369031) 1 NC_017328.1 BolA superfamily transcriptional regulator 3369031 yrbA 12319405 yrbA Shigella flexneri 2002017 BolA superfamily transcriptional regulator YP_005728850.1 3368762 R 591020 CDS YP_005728851.1 384544787 12319406 complement(3369176..3369565) 1 NC_017328.1 putative NTP binding protein (contains STAS domain) 3369565 yrbB 12319406 yrbB Shigella flexneri 2002017 putative NTP binding protein (contains STAS domain) YP_005728851.1 3369176 R 591020 CDS YP_005728852.1 384544788 12319407 complement(3369469..3370104) 1 NC_017328.1 Protein yrbC precursor 3370104 yrbC 12319407 yrbC Shigella flexneri 2002017 Protein yrbC precursor YP_005728852.1 3369469 R 591020 CDS YP_005728853.1 384544789 12319408 complement(3370123..3370674) 1 NC_017328.1 cytoplasmic membrane protein 3370674 yrbD 12319408 yrbD Shigella flexneri 2002017 cytoplasmic membrane protein YP_005728853.1 3370123 R 591020 CDS YP_005728854.1 384544790 12319409 complement(3370679..3371461) 1 NC_017328.1 inner membrane protein yrbE 3371461 yrbE 12319409 yrbE Shigella flexneri 2002017 inner membrane protein yrbE YP_005728854.1 3370679 R 591020 CDS YP_005728855.1 384544791 12319410 complement(3371469..3372278) 1 NC_017328.1 ATPase 3372278 yrbF 12319410 yrbF Shigella flexneri 2002017 ATPase YP_005728855.1 3371469 R 591020 CDS YP_005728856.1 384544792 12319411 3372527..3373453 1 NC_017328.1 putative calcium/sodium:proton antiporter 3373453 yrbG 12319411 yrbG Shigella flexneri 2002017 putative calcium/sodium:proton antiporter YP_005728856.1 3372527 D 591020 CDS YP_005728857.1 384544793 12319412 3373446..3374453 1 NC_017328.1 arabinose 5-phosphate isomerase 3374453 kdsD 12319412 kdsD Shigella flexneri 2002017 arabinose 5-phosphate isomerase YP_005728857.1 3373446 D 591020 CDS YP_005728858.1 384544794 12319413 3374474..3375040 1 NC_017328.1 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 3375040 kdsC 12319413 kdsC Shigella flexneri 2002017 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase YP_005728858.1 3374474 D 591020 CDS YP_005728859.1 384544795 12319414 3375037..3375612 1 NC_017328.1 hypothetical protein 3375612 12319414 SFxv_3552 Shigella flexneri 2002017 hypothetical protein YP_005728859.1 3375037 D 591020 CDS YP_005728860.1 384544796 12319415 3375560..3376138 1 NC_017328.1 putative ABC superfamily transport protein 3376138 lptA 12319415 lptA Shigella flexneri 2002017 putative ABC superfamily transport protein YP_005728860.1 3375560 D 591020 CDS YP_005728861.1 384544797 12319416 3376145..3376870 1 NC_017328.1 putative ABC transporter ATP-binding protein yhbG 3376870 lptB 12319416 lptB Shigella flexneri 2002017 putative ABC transporter ATP-binding protein yhbG YP_005728861.1 3376145 D 591020 CDS YP_005728862.1 384544798 12319417 3376918..3378351 1 NC_017328.1 DNA-directed RNA polymerase subunit N 3378351 rpoN 12319417 rpoN Shigella flexneri 2002017 DNA-directed RNA polymerase subunit N YP_005728862.1 3376918 D 591020 CDS YP_005728863.1 384544799 12319418 3378374..3378661 1 NC_017328.1 putative sigma(54) modulation protein 3378661 hpf 12319418 hpf Shigella flexneri 2002017 putative sigma(54) modulation protein YP_005728863.1 3378374 D 591020 CDS YP_005728864.1 384544800 12319419 3378779..3379270 1 NC_017328.1 Nitrogen regulatory protein (Enzyme IIA-NTR) 3379270 ptsN 12319419 ptsN Shigella flexneri 2002017 Nitrogen regulatory protein (Enzyme IIA-NTR) YP_005728864.1 3378779 D 591020 CDS YP_005728865.1 384544801 12319420 3379316..3380170 1 NC_017328.1 hypothetical protein 3380170 12319420 SFxv_3558 Shigella flexneri 2002017 hypothetical protein YP_005728865.1 3379316 D 591020 CDS YP_005728866.1 384544802 12319421 3380167..3380439 1 NC_017328.1 Phosphocarrier protein NPr 3380439 npr 12319421 npr Shigella flexneri 2002017 Phosphocarrier protein NPr YP_005728866.1 3380167 D 591020 CDS YP_005728867.1 384544803 12319422 3380652..3381284 1 NC_017328.1 hypothetical protein 3381284 yrbL 12319422 yrbL Shigella flexneri 2002017 hypothetical protein YP_005728867.1 3380652 D 591020 CDS YP_005728868.1 384544804 12319424 complement(3382005..3382667) 1 NC_017328.1 Enhancing lycopene biosynthesis protein 2 3382667 elbB 12319424 elbB Shigella flexneri 2002017 Enhancing lycopene biosynthesis protein 2 YP_005728868.1 3382005 R 591020 CDS YP_005728869.1 384544805 12319425 complement(3382888..3385224) 1 NC_017328.1 Aerobic respiration control sensor protein arcB 3385224 arcB 12319425 arcB Shigella flexneri 2002017 Aerobic respiration control sensor protein arcB YP_005728869.1 3382888 R 591020 CDS YP_005728870.1 384544806 12319426 complement(3385320..3386249) 1 NC_017328.1 putative Fe-S oxidoreductase 3386249 yhcC 12319426 yhcC Shigella flexneri 2002017 putative Fe-S oxidoreductase YP_005728870.1 3385320 R 591020 CDS YP_005728871.1 384544807 12319427 3386831..3391384 1 NC_017328.1 Glutamate synthase (NADPH), large subunit 3391384 gltB 12319427 gltB Shigella flexneri 2002017 Glutamate synthase (NADPH), large subunit YP_005728871.1 3386831 D 591020 CDS YP_005728872.1 384544808 12319428 3391397..3392815 1 NC_017328.1 glutamate synthase small chain 3392815 gltD 12319428 gltD Shigella flexneri 2002017 glutamate synthase small chain YP_005728872.1 3391397 D 591020 CDS YP_005728873.1 384544809 12319429 3392999..3393478 1 NC_017328.1 hypothetical protein 3393478 yhcG 12319429 yhcG Shigella flexneri 2002017 hypothetical protein YP_005728873.1 3392999 D 591020 CDS YP_005728874.1 384544810 12319430 3393856..3395031 1 NC_017328.1 IS600 orf 3395031 12319430 SFxv_3568 Shigella flexneri 2002017 IS600 orf YP_005728874.1 3393856 D 591020 CDS YP_005728875.1 384544811 12319431 complement(3395107..3395571) 1 NC_017328.1 hypothetical protein 3395571 12319431 SFxv_3569 Shigella flexneri 2002017 hypothetical protein YP_005728875.1 3395107 R 591020 CDS YP_005728876.1 384544812 12319432 complement(3395568..3396443) 1 NC_017328.1 putative N-acetylmannosamine kinase 3396443 nanK 12319432 nanK Shigella flexneri 2002017 putative N-acetylmannosamine kinase YP_005728876.1 3395568 R 591020 CDS YP_005728877.1 384544813 12319433 complement(3396440..3397129) 1 NC_017328.1 putative N-acetylmannosamine-6-phosphate 2-epimerase 3397129 nanE 12319433 nanE Shigella flexneri 2002017 putative N-acetylmannosamine-6-phosphate 2-epimerase YP_005728877.1 3396440 R 591020 CDS YP_005728878.1 384544814 12319434 complement(3397177..3398667) 1 NC_017328.1 Sialic acid transporter 3398667 nanT 12319434 nanT Shigella flexneri 2002017 Sialic acid transporter YP_005728878.1 3397177 R 591020 CDS YP_005728879.1 384544815 12319435 complement(3398777..3399670) 1 NC_017328.1 N-acetylneuraminate lyase 3399670 nanA 12319435 nanA Shigella flexneri 2002017 N-acetylneuraminate lyase YP_005728879.1 3398777 R 591020 CDS YP_005728880.1 384544816 12319436 complement(3399792..3400583) 1 NC_017328.1 transcriptional regulator nanR 3400583 nanR 12319436 nanR Shigella flexneri 2002017 transcriptional regulator nanR YP_005728880.1 3399792 R 591020 CDS YP_005728881.1 384544817 12319437 complement(3400853..3401140) 1 NC_017328.1 putative IS1 encoded protein 3401140 12319437 SFxv_3575 Shigella flexneri 2002017 putative IS1 encoded protein YP_005728881.1 3400853 R 591020 CDS YP_005728882.1 384544818 12319438 3401215..3401718 1 NC_017328.1 IS1 orfB 3401718 12319438 SFxv_3576 Shigella flexneri 2002017 IS1 orfB YP_005728882.1 3401215 D 591020 CDS YP_005728883.1 384544819 12319439 3401739..3403106 1 NC_017328.1 putative C4-dicarboxylate transporter 3403106 dcuD 12319439 dcuD Shigella flexneri 2002017 putative C4-dicarboxylate transporter YP_005728883.1 3401739 D 591020 CDS YP_005728884.1 384544820 12319440 complement(3403149..3403646) 1 NC_017328.1 putative Stringent starvation protein B 3403646 sspB 12319440 sspB Shigella flexneri 2002017 putative Stringent starvation protein B YP_005728884.1 3403149 R 591020 CDS YP_005728885.1 384544821 12319441 complement(3403652..3404290) 1 NC_017328.1 Stringent starvation protein A 3404290 sspA 12319441 sspA Shigella flexneri 2002017 Stringent starvation protein A YP_005728885.1 3403652 R 591020 CDS YP_005728886.1 384544822 12319442 complement(3404685..3405077) 1 NC_017328.1 30S ribosomal protein S9 3405077 rpsI 12319442 rpsI Shigella flexneri 2002017 30S ribosomal protein S9 YP_005728886.1 3404685 R 591020 CDS YP_005728887.1 384544823 12319443 complement(3405093..3405575) 1 NC_017328.1 50S ribosomal protein L13 3405575 rplM 12319443 rplM Shigella flexneri 2002017 50S ribosomal protein L13 YP_005728887.1 3405093 R 591020 CDS YP_005728888.1 384544824 12319444 complement(3405739..3406866) 1 NC_017328.1 ATPase 3406866 yhcM 12319444 yhcM Shigella flexneri 2002017 ATPase YP_005728888.1 3405739 R 591020 CDS YP_005728889.1 384544825 12319445 3407054..3407458 1 NC_017328.1 cytochrome d ubiquinol oxidase subunit III 3407458 yhcB 12319445 yhcB Shigella flexneri 2002017 cytochrome d ubiquinol oxidase subunit III YP_005728889.1 3407054 D 591020 CDS YP_005728890.1 384544826 12319447 3409049..3410116 1 NC_017328.1 Protease 3410116 degS 12319447 degS Shigella flexneri 2002017 Protease YP_005728890.1 3409049 D 591020 CDS YP_005728891.1 384544827 12319448 complement(3410178..3411182) 1 NC_017328.1 malate dehydrogenase 3411182 mdh 12319448 mdh Shigella flexneri 2002017 malate dehydrogenase YP_005728891.1 3410178 R 591020 CDS YP_005728892.1 384544828 12319449 3411551..3412021 1 NC_017328.1 Arginine repressor 3412021 argR 12319449 argR Shigella flexneri 2002017 Arginine repressor YP_005728892.1 3411551 D 591020 CDS YP_005728893.1 384544829 12319450 3412335..3412649 1 NC_017328.1 hypothetical protein 3412649 12319450 SFxv_3589 Shigella flexneri 2002017 hypothetical protein YP_005728893.1 3412335 D 591020 CDS YP_005728894.1 384544830 12319451 complement(3412705..3412977) 1 NC_017328.1 hypothetical protein 3412977 12319451 SFxv_3590 Shigella flexneri 2002017 hypothetical protein YP_005728894.1 3412705 R 591020 CDS YP_005728895.1 384544831 12319452 complement(3413069..3415036) 1 NC_017328.1 p-hydroxybenzoic acid efflux pump subunit aaeB 3415036 aaeB 12319452 aaeB Shigella flexneri 2002017 p-hydroxybenzoic acid efflux pump subunit aaeB YP_005728895.1 3413069 R 591020 CDS YP_005728896.1 384544832 12319453 complement(3415042..3415974) 1 NC_017328.1 p-hydroxybenzoic acid efflux pump subunit aaeA 3415974 aaeA 12319453 aaeA Shigella flexneri 2002017 p-hydroxybenzoic acid efflux pump subunit aaeA YP_005728896.1 3415042 R 591020 CDS YP_005728897.1 384544833 12319454 complement(3415982..3416254) 1 NC_017328.1 Protein AaeX 3416254 aaeX 12319454 aaeX Shigella flexneri 2002017 Protein AaeX YP_005728897.1 3415982 R 591020 CDS YP_005728898.1 384544834 12319455 3416368..3417297 1 NC_017328.1 Quorum sensing Escherichia coli regulator A; Quorum sensing regulator A 3417297 aaeR 12319455 aaeR Shigella flexneri 2002017 Quorum sensing regulator A YP_005728898.1 3416368 D 591020 CDS YP_005728899.1 384544835 12319456 complement(3417425..3418870) 1 NC_017328.1 Suppresses inhibitory activity of CsrA 3418870 tldD 12319456 tldD Shigella flexneri 2002017 Suppresses inhibitory activity of CsrA YP_005728899.1 3417425 R 591020 CDS YP_005728900.1 384544836 12319457 complement(3419026..3422826) 1 NC_017328.1 hypothetical protein 3422826 yhdP 12319457 yhdP Shigella flexneri 2002017 hypothetical protein YP_005728900.1 3419026 R 591020 CDS YP_005728901.1 384544837 12319458 complement(3422894..3424363) 1 NC_017328.1 Ribonuclease G 3424363 rng 12319458 rng Shigella flexneri 2002017 Ribonuclease G YP_005728901.1 3422894 R 591020 CDS YP_005728902.1 384544838 12319459 complement(3424353..3424946) 1 NC_017328.1 Maf-like protein yhdE 3424946 yhdE 12319459 yhdE Shigella flexneri 2002017 Maf-like protein yhdE YP_005728902.1 3424353 R 591020 CDS YP_005728903.1 384544839 12319460 complement(3424955..3425443) 1 NC_017328.1 Rod shape-determining protein 3425443 mreD 12319460 mreD Shigella flexneri 2002017 Rod shape-determining protein YP_005728903.1 3424955 R 591020 CDS YP_005728904.1 384544840 12319461 complement(3425443..3426546) 1 NC_017328.1 Rod shape-determining protein MreC 3426546 mreC 12319461 mreC Shigella flexneri 2002017 Rod shape-determining protein MreC YP_005728904.1 3425443 R 591020 CDS YP_005728905.1 384544841 12319462 complement(3426612..3427715) 1 NC_017328.1 Rod shape-determining protein mreB 3427715 mreB 12319462 mreB Shigella flexneri 2002017 Rod shape-determining protein mreB YP_005728905.1 3426612 R 591020 CDS YP_005728906.1 384544842 12319463 complement(3427960..3429900) 1 NC_017328.1 regulatory protein CsrD 3429900 csrD 12319463 csrD Shigella flexneri 2002017 regulatory protein CsrD YP_005728906.1 3427960 R 591020 CDS YP_005728907.1 384544843 12319464 3430052..3431026 1 NC_017328.1 putative dehydrogenase 3431026 yhdH 12319464 yhdH Shigella flexneri 2002017 putative dehydrogenase YP_005728907.1 3430052 D 591020 CDS YP_005728908.1 384544844 12319465 complement(3431084..3431185) 1 NC_017328.1 hypothetical protein 3431185 12319465 SFxv_3604 Shigella flexneri 2002017 hypothetical protein YP_005728908.1 3431084 R 591020 CDS YP_005728909.1 384544845 12319466 3432004..3432474 1 NC_017328.1 acetyl-CoA carboxylase biotin carboxyl carrier protein 3432474 accB 12319466 accB Shigella flexneri 2002017 acetyl-CoA carboxylase biotin carboxyl carrier protein YP_005728909.1 3432004 D 591020 CDS YP_005728910.1 384544846 12319467 3432485..3433834 1 NC_017328.1 Acetyl CoA carboxylase, biotin carboxylase subunit 3433834 accC 12319467 accC Shigella flexneri 2002017 Acetyl CoA carboxylase, biotin carboxylase subunit YP_005728910.1 3432485 D 591020 CDS YP_005728911.1 384544847 12319468 3433943..3434185 1 NC_017328.1 hypothetical protein 3434185 yhdT 12319468 yhdT Shigella flexneri 2002017 hypothetical protein YP_005728911.1 3433943 D 591020 CDS YP_005728912.1 384544848 12319469 3434175..3435626 1 NC_017328.1 Sodium/pantothenate symporter 3435626 panF 12319469 panF Shigella flexneri 2002017 Sodium/pantothenate symporter YP_005728912.1 3434175 D 591020 CDS YP_005728913.1 384544849 12319470 3435638..3436519 1 NC_017328.1 50S ribosomal protein L11 methyltransferase 3436519 prmA 12319470 prmA Shigella flexneri 2002017 50S ribosomal protein L11 methyltransferase YP_005728913.1 3435638 D 591020 CDS YP_005728914.1 384544850 12319471 3436848..3437813 1 NC_017328.1 tRNA-dihydrouridine synthase B 3437813 dusB 12319471 dusB Shigella flexneri 2002017 tRNA-dihydrouridine synthase B YP_005728914.1 3436848 D 591020 CDS YP_005728915.1 384544851 12319472 3437839..3438135 1 NC_017328.1 DNA-binding protein fis 3438135 fis 12319472 fis Shigella flexneri 2002017 DNA-binding protein fis YP_005728915.1 3437839 D 591020 CDS YP_005728916.1 384544852 12319473 3438221..3439105 1 NC_017328.1 putative methyltransferase 3439105 yhdJ 12319473 yhdJ Shigella flexneri 2002017 putative methyltransferase YP_005728916.1 3438221 D 591020 CDS YP_005728917.1 384544853 12319474 3439162..3439389 1 NC_017328.1 hypothetical protein 3439389 12319474 SFxv_3614 Shigella flexneri 2002017 hypothetical protein YP_005728917.1 3439162 D 591020 CDS YP_005728918.1 384544854 12319475 complement(3439383..3439886) 1 NC_017328.1 IS1 orfB 3439886 12319475 SFxv_3615 Shigella flexneri 2002017 IS1 orfB YP_005728918.1 3439383 R 591020 CDS YP_005728919.1 384544855 12319476 3440000..3440287 1 NC_017328.1 putative IS1 encoded protein 3440287 12319476 SFxv_3616 Shigella flexneri 2002017 putative IS1 encoded protein YP_005728919.1 3440000 D 591020 CDS YP_005728920.1 384544856 12319477 3440316..3441341 1 NC_017328.1 putative periplasmic binding transport protein 3441341 12319477 SFxv_3617 Shigella flexneri 2002017 putative periplasmic binding transport protein YP_005728920.1 3440316 D 591020 CDS YP_005728921.1 384544857 12319479 complement(3441970..3442473) 1 NC_017328.1 IS1 orfB 3442473 12319479 SFxv_3619 Shigella flexneri 2002017 IS1 orfB YP_005728921.1 3441970 R 591020 CDS YP_005728922.1 384544858 12319480 3442587..3442781 1 NC_017328.1 putative IS1 encoded protein 3442781 12319480 SFxv_3620 Shigella flexneri 2002017 putative IS1 encoded protein YP_005728922.1 3442587 D 591020 CDS YP_005728923.1 384544859 12319481 3443362..3444468 1 NC_017328.1 putative transport system permease 3444468 yhdY 12319481 yhdY Shigella flexneri 2002017 putative transport system permease YP_005728923.1 3443362 D 591020 CDS YP_005728924.1 384544860 12319482 3444476..3445234 1 NC_017328.1 ATPase 3445234 yhdZ 12319482 yhdZ Shigella flexneri 2002017 ATPase YP_005728924.1 3444476 D 591020 CDS YP_005728925.1 384544861 12319490 3450899..3451669 1 NC_017328.1 putative transferase 3451669 yrdA 12319490 yrdA Shigella flexneri 2002017 putative transferase YP_005728925.1 3450899 D 591020 CDS YP_005728926.1 384544862 12319491 complement(3451645..3451902) 1 NC_017328.1 hypothetical protein 3451902 yrdB 12319491 yrdB Shigella flexneri 2002017 hypothetical protein YP_005728926.1 3451645 R 591020 CDS YP_005728927.1 384544863 12319492 complement(3451899..3452717) 1 NC_017328.1 shikimate dehydrogenase 3452717 aroE 12319492 aroE Shigella flexneri 2002017 shikimate dehydrogenase YP_005728927.1 3451899 R 591020 CDS YP_005728928.1 384544864 12319493 complement(3452722..3453339) 1 NC_017328.1 putative ribosome maturation factor 3453339 rimN 12319493 rimN Shigella flexneri 2002017 putative ribosome maturation factor YP_005728928.1 3452722 R 591020 CDS YP_005728929.1 384544865 12319494 complement(3453299..3453841) 1 NC_017328.1 Topoisomerase DNA-binding C4 zinc finger domain protein 3453841 yrdD 12319494 yrdD Shigella flexneri 2002017 Topoisomerase DNA-binding C4 zinc finger domain protein YP_005728929.1 3453299 R 591020 CDS YP_005728930.1 384544866 12319495 complement(3453870..3454343) 1 NC_017328.1 hypothetical protein 3454343 smg 12319495 smg Shigella flexneri 2002017 hypothetical protein YP_005728930.1 3453870 R 591020 CDS YP_005728931.1 384544867 12319496 complement(3454315..3455439) 1 NC_017328.1 putative Rossmann fold nucleotide-binding protein involved in DNA uptake 3455439 smf 12319496 smf Shigella flexneri 2002017 putative Rossmann fold nucleotide-binding protein involved in DNA uptake YP_005728931.1 3454315 R 591020 CDS YP_005728932.1 384544868 12319497 3455604..3456113 1 NC_017328.1 putative N-formylmethionyl-tRNA deformylase 3456113 def 12319497 def Shigella flexneri 2002017 putative N-formylmethionyl-tRNA deformylase YP_005728932.1 3455604 D 591020 CDS YP_005728933.1 384544869 12319498 3456128..3457075 1 NC_017328.1 Methionyl-tRNA formyltransferase 3457075 fmt 12319498 fmt Shigella flexneri 2002017 Methionyl-tRNA formyltransferase YP_005728933.1 3456128 D 591020 CDS YP_005728934.1 384544870 12319499 3457100..3458410 1 NC_017328.1 Ribosomal RNA small subunit methyltransferase B 3458410 rsmB 12319499 rsmB Shigella flexneri 2002017 Ribosomal RNA small subunit methyltransferase B YP_005728934.1 3457100 D 591020 CDS YP_005728935.1 384544871 12319500 3458432..3459808 1 NC_017328.1 Trk system potassium uptake protein trkA (K(+)-uptake protein trkA) 3459808 trkA 12319500 trkA Shigella flexneri 2002017 Trk system potassium uptake protein trkA (K(+)-uptake protein trkA) YP_005728935.1 3458432 D 591020 CDS YP_005728936.1 384544872 12319501 complement(3460014..3460397) 1 NC_017328.1 50S ribosomal protein L17 3460397 rplQ 12319501 rplQ Shigella flexneri 2002017 50S ribosomal protein L17 YP_005728936.1 3460014 R 591020 CDS YP_005728937.1 384544873 12319502 complement(3460438..3461427) 1 NC_017328.1 DNA-directed RNA polymerase subunit alpha 3461427 rpoA 12319502 rpoA Shigella flexneri 2002017 DNA-directed RNA polymerase subunit alpha YP_005728937.1 3460438 R 591020 CDS YP_005728938.1 384544874 12319503 complement(3461453..3462073) 1 NC_017328.1 30S ribosomal protein S4 3462073 rpsD 12319503 rpsD Shigella flexneri 2002017 30S ribosomal protein S4 YP_005728938.1 3461453 R 591020 CDS YP_005728939.1 384544875 12319504 complement(3462107..3462496) 1 NC_017328.1 30S ribosomal protein S11 3462496 rpsK 12319504 rpsK Shigella flexneri 2002017 30S ribosomal protein S11 YP_005728939.1 3462107 R 591020 CDS YP_005728940.1 384544876 12319505 complement(3462513..3462869) 1 NC_017328.1 30S ribosomal protein S13 3462869 rpsM 12319505 rpsM Shigella flexneri 2002017 30S ribosomal protein S13 YP_005728940.1 3462513 R 591020 CDS YP_005728941.1 384544877 12319506 complement(3463016..3463132) 1 NC_017328.1 Ribosomal protein L36 3463132 rpmJ 12319506 rpmJ Shigella flexneri 2002017 Ribosomal protein L36 YP_005728941.1 3463016 R 591020 CDS YP_005728942.1 384544878 12319507 complement(3463164..3464495) 1 NC_017328.1 Preprotein translocase subunit secY 3464495 secY 12319507 secY Shigella flexneri 2002017 Preprotein translocase subunit secY YP_005728942.1 3463164 R 591020 CDS YP_005728943.1 384544879 12319508 complement(3464503..3464937) 1 NC_017328.1 50S ribosomal protein L15 3464937 rplO 12319508 rplO Shigella flexneri 2002017 50S ribosomal protein L15 YP_005728943.1 3464503 R 591020 CDS YP_005728944.1 384544880 12319509 complement(3464941..3465120) 1 NC_017328.1 50S ribosomal protein L30 3465120 rpmD 12319509 rpmD Shigella flexneri 2002017 50S ribosomal protein L30 YP_005728944.1 3464941 R 591020 CDS YP_005728945.1 384544881 12319510 complement(3465124..3465627) 1 NC_017328.1 30S ribosomal protein S5 3465627 rpsE 12319510 rpsE Shigella flexneri 2002017 30S ribosomal protein S5 YP_005728945.1 3465124 R 591020 CDS YP_005728946.1 384544882 12319511 complement(3465642..3465995) 1 NC_017328.1 50S ribosomal protein L18 3465995 rplR 12319511 rplR Shigella flexneri 2002017 50S ribosomal protein L18 YP_005728946.1 3465642 R 591020 CDS YP_005728947.1 384544883 12319512 complement(3466005..3466538) 1 NC_017328.1 50S ribosomal protein L6 3466538 rplF 12319512 rplF Shigella flexneri 2002017 50S ribosomal protein L6 YP_005728947.1 3466005 R 591020 CDS YP_005728948.1 384544884 12319513 complement(3466551..3466943) 1 NC_017328.1 30S ribosomal protein S8 3466943 rpsH 12319513 rpsH Shigella flexneri 2002017 30S ribosomal protein S8 YP_005728948.1 3466551 R 591020 CDS YP_005728949.1 384544885 12319514 complement(3466977..3467282) 1 NC_017328.1 30S ribosomal protein S14 3467282 rpsN 12319514 rpsN Shigella flexneri 2002017 30S ribosomal protein S14 YP_005728949.1 3466977 R 591020 CDS YP_005728950.1 384544886 12319515 complement(3467297..3467836) 1 NC_017328.1 50S ribosomal protein L5 3467836 rplE 12319515 rplE Shigella flexneri 2002017 50S ribosomal protein L5 YP_005728950.1 3467297 R 591020 CDS YP_005728951.1 384544887 12319516 complement(3467851..3468165) 1 NC_017328.1 50S ribosomal protein L24 3468165 rplX 12319516 rplX Shigella flexneri 2002017 50S ribosomal protein L24 YP_005728951.1 3467851 R 591020 CDS YP_005728952.1 384544888 12319517 complement(3468176..3468547) 1 NC_017328.1 50S ribosomal protein L14 3468547 rplN 12319517 rplN Shigella flexneri 2002017 50S ribosomal protein L14 YP_005728952.1 3468176 R 591020 CDS YP_005728953.1 384544889 12319518 complement(3468712..3468966) 1 NC_017328.1 30S ribosomal protein S17 3468966 rpsQ 12319518 rpsQ Shigella flexneri 2002017 30S ribosomal protein S17 YP_005728953.1 3468712 R 591020 CDS YP_005728954.1 384544890 12319519 complement(3468966..3469157) 1 NC_017328.1 50S ribosomal protein L29 3469157 rpmC 12319519 rpmC Shigella flexneri 2002017 50S ribosomal protein L29 YP_005728954.1 3468966 R 591020 CDS YP_005728955.1 384544891 12319520 complement(3469157..3469567) 1 NC_017328.1 50S ribosomal protein L16 3469567 rplP 12319520 rplP Shigella flexneri 2002017 50S ribosomal protein L16 YP_005728955.1 3469157 R 591020 CDS YP_005728956.1 384544892 12319521 complement(3469608..3470282) 1 NC_017328.1 30S ribosomal protein S3 3470282 rpsC 12319521 rpsC Shigella flexneri 2002017 30S ribosomal protein S3 YP_005728956.1 3469608 R 591020 CDS YP_005728957.1 384544893 12319522 complement(3470300..3470632) 1 NC_017328.1 50S ribosomal protein L22 3470632 rplV 12319522 rplV Shigella flexneri 2002017 50S ribosomal protein L22 YP_005728957.1 3470300 R 591020 CDS YP_005728958.1 384544894 12319523 complement(3470647..3470925) 1 NC_017328.1 30S ribosomal protein S19 3470925 rpsS 12319523 rpsS Shigella flexneri 2002017 30S ribosomal protein S19 YP_005728958.1 3470647 R 591020 CDS YP_005728959.1 384544895 12319524 complement(3470942..3471763) 1 NC_017328.1 50S ribosomal protein L2 3471763 rplB 12319524 rplB Shigella flexneri 2002017 50S ribosomal protein L2 YP_005728959.1 3470942 R 591020 CDS YP_005728960.1 384544896 12319525 complement(3471781..3472083) 1 NC_017328.1 50S ribosomal protein L23 3472083 rplW 12319525 rplW Shigella flexneri 2002017 50S ribosomal protein L23 YP_005728960.1 3471781 R 591020 CDS YP_005728961.1 384544897 12319526 complement(3472080..3472685) 1 NC_017328.1 50S ribosomal protein L4 3472685 rplD 12319526 rplD Shigella flexneri 2002017 50S ribosomal protein L4 YP_005728961.1 3472080 R 591020 CDS YP_005728962.1 384544898 12319527 complement(3472696..3473325) 1 NC_017328.1 50S ribosomal protein L3 3473325 rplC 12319527 rplC Shigella flexneri 2002017 50S ribosomal protein L3 YP_005728962.1 3472696 R 591020 CDS YP_005728963.1 384544899 12319528 complement(3473358..3473669) 1 NC_017328.1 Ribosomal protein S10 3473669 rpsJ 12319528 rpsJ Shigella flexneri 2002017 Ribosomal protein S10 YP_005728963.1 3473358 R 591020 CDS YP_005728964.1 384544900 12319530 complement(3474512..3474988) 1 NC_017328.1 Bacterioferritin 3474988 12319530 SFxv_3667 Shigella flexneri 2002017 Bacterioferritin YP_005728964.1 3474512 R 591020 CDS YP_005728965.1 384544901 12319531 complement(3475061..3475255) 1 NC_017328.1 Bacterioferritin-associated ferredoxin 3475255 12319531 SFxv_3668 Shigella flexneri 2002017 Bacterioferritin-associated ferredoxin YP_005728965.1 3475061 R 591020 CDS YP_005728966.1 384544902 12319532 complement(3475438..3476622) 1 NC_017328.1 Translation elongation factor EF-Tu 3476622 tufA 12319532 tufA Shigella flexneri 2002017 Translation elongation factor EF-Tu YP_005728966.1 3475438 R 591020 CDS YP_005728967.1 384544903 12319533 complement(3476693..3478807) 1 NC_017328.1 Elongation factor G 3478807 fusA 12319533 fusA Shigella flexneri 2002017 Elongation factor G YP_005728967.1 3476693 R 591020 CDS YP_005728968.1 384544904 12319534 complement(3478904..3479374) 1 NC_017328.1 30S ribosomal protein S7 3479374 rpsG 12319534 rpsG Shigella flexneri 2002017 30S ribosomal protein S7 YP_005728968.1 3478904 R 591020 CDS YP_005728969.1 384544905 12319535 complement(3479471..3479845) 1 NC_017328.1 Ribosomal protein S12 3479845 rpsL 12319535 rpsL Shigella flexneri 2002017 Ribosomal protein S12 YP_005728969.1 3479471 R 591020 CDS YP_005728970.1 384544906 12319536 complement(3479971..3480258) 1 NC_017328.1 Protein tusB 3480258 yheL 12319536 yheL Shigella flexneri 2002017 Protein tusB YP_005728970.1 3479971 R 591020 CDS YP_005728971.1 384544907 12319537 complement(3480266..3480625) 1 NC_017328.1 Protein tusC 3480625 yheM 12319537 yheM Shigella flexneri 2002017 Protein tusC YP_005728971.1 3480266 R 591020 CDS YP_005728972.1 384544908 12319538 complement(3480625..3481011) 1 NC_017328.1 Sulfurtransferase tusD 3481011 yheN 12319538 yheN Shigella flexneri 2002017 Sulfurtransferase tusD YP_005728972.1 3480625 R 591020 CDS YP_005728973.1 384544909 12319539 complement(3481011..3481733) 1 NC_017328.1 hypothetical protein 3481733 12319539 SFxv_3676 Shigella flexneri 2002017 hypothetical protein YP_005728973.1 3481011 R 591020 CDS YP_005728974.1 384544910 12319540 complement(3481900..3482712) 1 NC_017328.1 FKBP-type peptidyl-prolyl cis-trans isomerase fkpA precursor 3482712 fkpA 12319540 fkpA Shigella flexneri 2002017 FKBP-type peptidyl-prolyl cis-trans isomerase fkpA precursor YP_005728974.1 3481900 R 591020 CDS YP_005728975.1 384544911 12319541 3482933..3483151 1 NC_017328.1 hypothetical protein 3483151 12319541 SFxv_3678 Shigella flexneri 2002017 hypothetical protein YP_005728975.1 3482933 D 591020 CDS YP_005728976.1 384544912 12319542 complement(3483885..3484085) 1 NC_017328.1 putative cytoplasmic protein 3484085 yheV 12319542 yheV Shigella flexneri 2002017 putative cytoplasmic protein YP_005728976.1 3483885 R 591020 CDS YP_005728977.1 384544913 12319543 complement(3484095..3485768) 1 NC_017328.1 putative glutathione-regulated potassium-efflux system protein kefB (K(+)/H(+) antiporter) (NEM-activable K(+)/H(+) antiporter) 3485768 kefB 12319543 kefB Shigella flexneri 2002017 putative glutathione-regulated potassium-efflux system protein kefB (K(+)/H(+) antiporter) (NEM-activable K(+)/H(+) antiporter) YP_005728977.1 3484095 R 591020 CDS YP_005728978.1 384544914 12319544 complement(3485832..3486386) 1 NC_017328.1 putative NAD(P)H oxidoreductase 3486386 kefG 12319544 kefG Shigella flexneri 2002017 putative NAD(P)H oxidoreductase YP_005728978.1 3485832 R 591020 CDS YP_005728979.1 384544915 12319545 3486514..3488427 1 NC_017328.1 ATPase 3488427 yheS 12319545 yheS Shigella flexneri 2002017 ATPase YP_005728979.1 3486514 D 591020 CDS YP_005728980.1 384544916 12319546 3488427..3489449 1 NC_017328.1 alpha/beta fold family hydrolase 3489449 yheT 12319546 yheT Shigella flexneri 2002017 alpha/beta fold family hydrolase YP_005728980.1 3488427 D 591020 CDS YP_005728981.1 384544917 12319547 3489443..3489661 1 NC_017328.1 hypothetical protein 3489661 12319547 SFxv_3684 Shigella flexneri 2002017 hypothetical protein YP_005728981.1 3489443 D 591020 CDS YP_005728982.1 384544918 12319548 3489715..3490584 1 NC_017328.1 putative phosphoribulokinase 3490584 prkB 12319548 prkB Shigella flexneri 2002017 putative phosphoribulokinase YP_005728982.1 3489715 D 591020 CDS YP_005728983.1 384544919 12319549 complement(3490639..3491043) 1 NC_017328.1 OsmC family protein 3491043 yhfA 12319549 yhfA Shigella flexneri 2002017 OsmC family protein YP_005728983.1 3490639 R 591020 CDS YP_005728984.1 384544920 12319550 3491345..3491977 1 NC_017328.1 Catabolite gene activator 3491977 crp 12319550 crp Shigella flexneri 2002017 Catabolite gene activator YP_005728984.1 3491345 D 591020 CDS YP_005728985.1 384544921 12319551 3492016..3494118 1 NC_017328.1 hypothetical protein 3494118 yhfK 12319551 yhfK Shigella flexneri 2002017 hypothetical protein YP_005728985.1 3492016 D 591020 CDS YP_005728986.1 384544922 12319552 complement(3494185..3495405) 1 NC_017328.1 Acetylornithine/succinyldiaminopimelate aminotransferase 3495405 argD 12319552 argD Shigella flexneri 2002017 Acetylornithine/succinyldiaminopimelate aminotransferase YP_005728986.1 3494185 R 591020 CDS YP_005728987.1 384544923 12319553 complement(3495491..3496054) 1 NC_017328.1 P-aminobenzoate synthetase, component II 3496054 pabA 12319553 pabA Shigella flexneri 2002017 P-aminobenzoate synthetase, component II YP_005728987.1 3495491 R 591020 CDS YP_005728988.1 384544924 12319554 complement(3496086..3496688) 1 NC_017328.1 Protein induced in stationary phase 3496688 fic 12319554 fic Shigella flexneri 2002017 Protein induced in stationary phase YP_005728988.1 3496086 R 591020 CDS YP_005728989.1 384544925 12319555 complement(3496678..3496845) 1 NC_017328.1 hypothetical protein 3496845 yhfG 12319555 yhfG Shigella flexneri 2002017 hypothetical protein YP_005728989.1 3496678 R 591020 CDS YP_005728990.1 384544926 12319556 complement(3496950..3497531) 1 NC_017328.1 peptidyl-prolyl cis-trans isomerase 3497531 ppiA 12319556 ppiA Shigella flexneri 2002017 peptidyl-prolyl cis-trans isomerase YP_005728990.1 3496950 R 591020 CDS YP_005728991.1 384544927 12319557 3497802..3498983 1 NC_017328.1 putative transport 3498983 tsgA 12319557 tsgA Shigella flexneri 2002017 putative transport YP_005728991.1 3497802 D 591020 CDS YP_005728992.1 384544928 12319558 3499563..3501788 1 NC_017328.1 Nitrite reductase (NAD(P)H) subunit 3501788 nirB 12319558 nirB Shigella flexneri 2002017 Nitrite reductase (NAD(P)H) subunit YP_005728992.1 3499563 D 591020 CDS YP_005728993.1 384544929 12319559 3501785..3502111 1 NC_017328.1 Nitrite reductase (NAD(P)H) subunit 3502111 nirD 12319559 nirD Shigella flexneri 2002017 Nitrite reductase (NAD(P)H) subunit YP_005728993.1 3501785 D 591020 CDS YP_005728994.1 384544930 12319560 3502237..3503043 1 NC_017328.1 putative nitrite transporter 3503043 nirC 12319560 nirC Shigella flexneri 2002017 putative nitrite transporter YP_005728994.1 3502237 D 591020 CDS YP_005728995.1 384544931 12319561 3503062..3504435 1 NC_017328.1 uroporphyrinogen III methylase 3504435 cysG 12319561 cysG Shigella flexneri 2002017 uroporphyrinogen III methylase YP_005728995.1 3503062 D 591020 CDS YP_005728996.1 384544932 12319562 3504682..3504849 1 NC_017328.1 hypothetical protein 3504849 12319562 SFxv_3699 Shigella flexneri 2002017 hypothetical protein YP_005728996.1 3504682 D 591020 CDS YP_005728997.1 384544933 12319564 3506481..3507524 1 NC_017328.1 SIS family protein 3507524 frlB 12319564 frlB Shigella flexneri 2002017 SIS family protein YP_005728997.1 3506481 D 591020 CDS YP_005728998.1 384544934 12319565 3507574..3508404 1 NC_017328.1 putative Sugar phosphate isomerase/epimerase 3508404 frlC 12319565 frlC Shigella flexneri 2002017 putative Sugar phosphate isomerase/epimerase YP_005728998.1 3507574 D 591020 CDS YP_005728999.1 384544935 12319566 3508401..3509186 1 NC_017328.1 Fructoselysine kinase 3509186 frlD 12319566 frlD Shigella flexneri 2002017 Fructoselysine kinase YP_005728999.1 3508401 D 591020 CDS YP_005729000.1 384544936 12319567 3509220..3510017 1 NC_017328.1 putative transcriptional regulator 3510017 frlR 12319567 frlR Shigella flexneri 2002017 putative transcriptional regulator YP_005729000.1 3509220 D 591020 CDS YP_005729001.1 384544937 12319568 complement(3510177..3511262) 1 NC_017328.1 hypothetical protein 3511262 12319568 SFxv_3705 Shigella flexneri 2002017 hypothetical protein YP_005729001.1 3510177 R 591020 CDS YP_005729002.1 384544938 12319569 complement(3511274..3512578) 1 NC_017328.1 putative transport system permease 3512578 yhfT 12319569 yhfT Shigella flexneri 2002017 putative transport system permease YP_005729002.1 3511274 R 591020 CDS YP_005729003.1 384544939 12319570 complement(3512590..3512982) 1 NC_017328.1 hypothetical protein 3512982 12319570 SFxv_3707 Shigella flexneri 2002017 hypothetical protein YP_005729003.1 3512590 R 591020 CDS YP_005729004.1 384544940 12319571 complement(3512954..3513832) 1 NC_017328.1 putative hydrolase 3513832 php 12319571 php Shigella flexneri 2002017 putative hydrolase YP_005729004.1 3512954 R 591020 CDS YP_005729005.1 384544941 12319572 complement(3513829..3515055) 1 NC_017328.1 putative Phosphopentomutase 3515055 yhfW 12319572 yhfW Shigella flexneri 2002017 putative Phosphopentomutase YP_005729005.1 3513829 R 591020 CDS YP_005729006.1 384544942 12319573 complement(3515056..3516219) 1 NC_017328.1 Alanine racemase domain protein 3516219 yhfX 12319573 yhfX Shigella flexneri 2002017 Alanine racemase domain protein YP_005729006.1 3515056 R 591020 CDS YP_005729007.1 384544943 12319574 complement(3516303..3516707) 1 NC_017328.1 hypothetical protein 3516707 12319574 SFxv_3711 Shigella flexneri 2002017 hypothetical protein YP_005729007.1 3516303 R 591020 CDS YP_005729008.1 384544944 12319575 complement(3516682..3517587) 1 NC_017328.1 hypothetical protein 3517587 12319575 SFxv_3712 Shigella flexneri 2002017 hypothetical protein YP_005729008.1 3516682 R 591020 CDS YP_005729009.1 384544945 12319576 complement(3517857..3518861) 1 NC_017328.1 tryptophanyl-tRNA synthetase 3518861 trpS 12319576 trpS Shigella flexneri 2002017 tryptophanyl-tRNA synthetase YP_005729009.1 3517857 R 591020 CDS YP_005729010.1 384544946 12319577 complement(3518854..3519612) 1 NC_017328.1 phosphoglycolate phosphatase 3519612 gph 12319577 gph Shigella flexneri 2002017 phosphoglycolate phosphatase YP_005729010.1 3518854 R 591020 CDS YP_005729011.1 384544947 12319578 complement(3519605..3520282) 1 NC_017328.1 D-ribulose-5-phosphate 3-epimerase 3520282 rpe 12319578 rpe Shigella flexneri 2002017 D-ribulose-5-phosphate 3-epimerase YP_005729011.1 3519605 R 591020 CDS YP_005729012.1 384544948 12319579 complement(3520300..3521136) 1 NC_017328.1 DNA adenine methylase 3521136 dam 12319579 dam Shigella flexneri 2002017 DNA adenine methylase YP_005729012.1 3520300 R 591020 CDS YP_005729013.1 384544949 12319580 complement(3521243..3522535) 1 NC_017328.1 hypothetical protein 3522535 damX 12319580 damX Shigella flexneri 2002017 hypothetical protein YP_005729013.1 3521243 R 591020 CDS YP_005729014.1 384544950 12319581 complement(3522627..3523715) 1 NC_017328.1 3-dehydroquinate synthase 3523715 aroB 12319581 aroB Shigella flexneri 2002017 3-dehydroquinate synthase YP_005729014.1 3522627 R 591020 CDS YP_005729015.1 384544951 12319582 complement(3523772..3524293) 1 NC_017328.1 Shikimate kinase 1 3524293 aroK 12319582 aroK Shigella flexneri 2002017 Shikimate kinase 1 YP_005729015.1 3523772 R 591020 CDS YP_005729016.1 384544952 12319583 complement(3524694..3525932) 1 NC_017328.1 putative transport protein 3525932 hofQ 12319583 hofQ Shigella flexneri 2002017 putative transport protein YP_005729016.1 3524694 R 591020 CDS YP_005729017.1 384544953 12319584 complement(3525844..3526122) 1 NC_017328.1 hypothetical protein 3526122 12319584 SFxv_3721 Shigella flexneri 2002017 hypothetical protein YP_005729017.1 3525844 R 591020 CDS YP_005729018.1 384544954 12319585 complement(3526240..3526680) 1 NC_017328.1 hypothetical protein 3526680 12319585 SFxv_3722 Shigella flexneri 2002017 hypothetical protein YP_005729018.1 3526240 R 591020 CDS YP_005729019.1 384544955 12319586 complement(3526664..3527203) 1 NC_017328.1 Fimbrial assembly family protein 3527203 hofN 12319586 hofN Shigella flexneri 2002017 Fimbrial assembly family protein YP_005729019.1 3526664 R 591020 CDS YP_005729020.1 384544956 12319587 complement(3527203..3528009) 1 NC_017328.1 hypothetical protein 3528009 12319587 SFxv_3724 Shigella flexneri 2002017 hypothetical protein YP_005729020.1 3527203 R 591020 CDS YP_005729021.1 384544957 12319588 3528078..3530654 1 NC_017328.1 peptidoglycan synthetase 3530654 mrcA 12319588 mrcA Shigella flexneri 2002017 peptidoglycan synthetase YP_005729021.1 3528078 D 591020 CDS YP_005729022.1 384544958 12319589 complement(3530819..3531379) 1 NC_017328.1 ADP compounds hydrolase nudE 3531379 nudE 12319589 nudE Shigella flexneri 2002017 ADP compounds hydrolase nudE YP_005729022.1 3530819 R 591020 CDS YP_005729023.1 384544959 12319590 3531699..3533834 1 NC_017328.1 putative dehydrogenase 3533834 yrfF 12319590 yrfF Shigella flexneri 2002017 putative dehydrogenase YP_005729023.1 3531699 D 591020 CDS YP_005729024.1 384544960 12319591 3533854..3534567 1 NC_017328.1 putative phosphatase 3534567 yrfG 12319591 yrfG Shigella flexneri 2002017 putative phosphatase YP_005729024.1 3533854 D 591020 CDS YP_005729025.1 384544961 12319592 3534578..3534979 1 NC_017328.1 ribosome-associated heat shock protein 3534979 hslR 12319592 hslR Shigella flexneri 2002017 ribosome-associated heat shock protein YP_005729025.1 3534578 D 591020 CDS YP_005729026.1 384544962 12319593 3535004..3535873 1 NC_017328.1 chaperonin 3535873 hslO 12319593 hslO Shigella flexneri 2002017 chaperonin YP_005729026.1 3535004 D 591020 CDS YP_005729027.1 384544963 12319594 complement(3536045..3537769) 1 NC_017328.1 putative transport protein 3537769 yhgE 12319594 yhgE Shigella flexneri 2002017 putative transport protein YP_005729027.1 3536045 R 591020 CDS YP_005729028.1 384544964 12319595 complement(3537775..3537903) 1 NC_017328.1 hypothetical protein 3537903 12319595 SFxv_3733 Shigella flexneri 2002017 hypothetical protein YP_005729028.1 3537775 R 591020 CDS YP_005729029.1 384544965 12319596 complement(3537845..3537976) 1 NC_017328.1 hypothetical protein 3537976 12319596 SFxv_3734 Shigella flexneri 2002017 hypothetical protein YP_005729029.1 3537845 R 591020 CDS YP_005729030.1 384544966 12319597 3538148..3539770 1 NC_017328.1 phosphoenolpyruvate carboxykinase 3539770 pck 12319597 pck Shigella flexneri 2002017 phosphoenolpyruvate carboxykinase YP_005729030.1 3538148 D 591020 CDS YP_005729031.1 384544967 12319598 complement(3539846..3541198) 1 NC_017328.1 Osmolarity sensor protein envZ 3541198 envZ 12319598 envZ Shigella flexneri 2002017 Osmolarity sensor protein envZ YP_005729031.1 3539846 R 591020 CDS YP_005729032.1 384544968 12319599 complement(3541195..3541914) 1 NC_017328.1 transcriptional regulatory protein ompR 3541914 ompR 12319599 ompR Shigella flexneri 2002017 transcriptional regulatory protein ompR YP_005729032.1 3541195 R 591020 CDS YP_005729033.1 384544969 12319600 3542142..3542618 1 NC_017328.1 Transcription elongation factor and transcript cleavage factor 3542618 greB 12319600 greB Shigella flexneri 2002017 Transcription elongation factor and transcript cleavage factor YP_005729033.1 3542142 D 591020 CDS YP_005729034.1 384544970 12319601 3542715..3545036 1 NC_017328.1 putative Transcriptional accessory protein 3545036 yhgF 12319601 yhgF Shigella flexneri 2002017 putative Transcriptional accessory protein YP_005729034.1 3542715 D 591020 CDS YP_005729035.1 384544971 12319602 3545474..3545701 1 NC_017328.1 Ferrous iron transport protein A 3545701 feoA 12319602 feoA Shigella flexneri 2002017 Ferrous iron transport protein A YP_005729035.1 3545474 D 591020 CDS YP_005729036.1 384544972 12319603 3545718..3548039 1 NC_017328.1 Ferrous iron transport protein B 3548039 feoB 12319603 feoB Shigella flexneri 2002017 Ferrous iron transport protein B YP_005729036.1 3545718 D 591020 CDS YP_005729037.1 384544973 12319604 3548030..3548275 1 NC_017328.1 Ferrous iron transport protein C 3548275 feoC 12319604 feoC Shigella flexneri 2002017 Ferrous iron transport protein C YP_005729037.1 3548030 D 591020 CDS YP_005729038.1 384544974 12319605 3548478..3549365 1 NC_017328.1 hypothetical protein 3549365 12319605 SFxv_3744 Shigella flexneri 2002017 hypothetical protein YP_005729038.1 3548478 D 591020 CDS YP_005729039.1 384544975 12319606 3549441..3549806 1 NC_017328.1 Insertion element IS2A putative protein 3549806 12319606 SFxv_3745 Shigella flexneri 2002017 Insertion element IS2A putative protein YP_005729039.1 3549441 D 591020 CDS YP_005729040.1 384544976 12319607 3549764..3550669 1 NC_017328.1 IS2 ORF2 3550669 12319607 SFxv_3746 Shigella flexneri 2002017 IS2 ORF2 YP_005729040.1 3549764 D 591020 CDS YP_005729041.1 384544977 12319608 complement(3549809..3550240) 1 NC_017328.1 putative IS2 ORF 3550240 12319608 SFxv_3748 Shigella flexneri 2002017 putative IS2 ORF YP_005729041.1 3549809 R 591020 CDS YP_005729042.1 384544978 12319609 3550765..3551034 1 NC_017328.1 hypothetical protein 3551034 12319609 SFxv_3749 Shigella flexneri 2002017 hypothetical protein YP_005729042.1 3550765 D 591020 CDS YP_005729043.1 384544979 12319610 3551028..3551393 1 NC_017328.1 putative Growth inhibitor 3551393 12319610 SFxv_3750 Shigella flexneri 2002017 putative Growth inhibitor YP_005729043.1 3551028 D 591020 CDS YP_005729044.1 384544980 12319611 complement(3551394..3552182) 1 NC_017328.1 Carboxylesterase bioH 3552182 bioH 12319611 bioH Shigella flexneri 2002017 Carboxylesterase bioH YP_005729044.1 3551394 R 591020 CDS YP_005729045.1 384544981 12319612 3552172..3552903 1 NC_017328.1 gluconate periplasmic binding protein 3552903 gntX 12319612 gntX Shigella flexneri 2002017 gluconate periplasmic binding protein YP_005729045.1 3552172 D 591020 CDS YP_005729046.1 384544982 12319613 3552962..3553537 1 NC_017328.1 gluconate transport-associated protein 3553537 gntY 12319613 gntY Shigella flexneri 2002017 gluconate transport-associated protein YP_005729046.1 3552962 D 591020 CDS YP_005729047.1 384544983 12319614 3553898..3555214 1 NC_017328.1 High-affinity gluconate transporter 3555214 gntT 12319614 gntT Shigella flexneri 2002017 High-affinity gluconate transporter YP_005729047.1 3553898 D 591020 CDS YP_005729048.1 384544984 12319615 complement(3555259..3557343) 1 NC_017328.1 4-alpha-glucanotransferase 3557343 malQ 12319615 malQ Shigella flexneri 2002017 4-alpha-glucanotransferase YP_005729048.1 3555259 R 591020 CDS YP_005729049.1 384544985 12319616 complement(3557353..3559746) 1 NC_017328.1 Maltodextrin phosphorylase 3559746 malP 12319616 malP Shigella flexneri 2002017 Maltodextrin phosphorylase YP_005729049.1 3557353 R 591020 CDS YP_005729050.1 384544986 12319618 complement(3563106..3564125) 1 NC_017328.1 putative RNA 3'-terminal phosphate cyclase 3564125 rtcA 12319618 rtcA Shigella flexneri 2002017 putative RNA 3'-terminal phosphate cyclase YP_005729050.1 3563106 R 591020 CDS YP_005729051.1 384544987 12319619 complement(3564126..3565352) 1 NC_017328.1 hypothetical protein 3565352 12319619 SFxv_3759 Shigella flexneri 2002017 hypothetical protein YP_005729051.1 3564126 R 591020 CDS YP_005729052.1 384544988 12319620 3565533..3567131 1 NC_017328.1 putative 2-component regulator 3567131 rtcR 12319620 rtcR Shigella flexneri 2002017 putative 2-component regulator YP_005729052.1 3565533 D 591020 CDS YP_005729053.1 384544989 12319621 complement(3567113..3567871) 1 NC_017328.1 Glycerol-3-phosphate regulon repressor 3567871 glpR 12319621 glpR Shigella flexneri 2002017 Glycerol-3-phosphate regulon repressor YP_005729053.1 3567113 R 591020 CDS YP_005729054.1 384544990 12319622 complement(3567888..3568718) 1 NC_017328.1 Protein of glp regulon 3568718 glpG 12319622 glpG Shigella flexneri 2002017 Protein of glp regulon YP_005729054.1 3567888 R 591020 CDS YP_005729055.1 384544991 12319623 complement(3568763..3569089) 1 NC_017328.1 Thiosulfate sulfurtransferase GlpE 3569089 glpE 12319623 glpE Shigella flexneri 2002017 Thiosulfate sulfurtransferase GlpE YP_005729055.1 3568763 R 591020 CDS YP_005729056.1 384544992 12319624 3569279..3570784 1 NC_017328.1 Sn-glycerol-3-phosphate dehydrogenase 3570784 glpD 12319624 glpD Shigella flexneri 2002017 Sn-glycerol-3-phosphate dehydrogenase YP_005729056.1 3569279 D 591020 CDS YP_005729057.1 384544993 12319625 complement(3570990..3571283) 1 NC_017328.1 hypothetical protein 3571283 12319625 SFxv_3766 Shigella flexneri 2002017 hypothetical protein YP_005729057.1 3570990 R 591020 CDS YP_005729058.1 384544994 12319626 complement(3571391..3572737) 1 NC_017328.1 IS4 ORF 3572737 12319626 SFxv_3767 Shigella flexneri 2002017 IS4 ORF YP_005729058.1 3571391 R 591020 CDS YP_005729059.1 384544995 12319627 complement(3572837..3575284) 1 NC_017328.1 Glycogen/starch/alpha-glucan phosphorylase 3575284 glgP 12319627 glgP Shigella flexneri 2002017 Glycogen/starch/alpha-glucan phosphorylase YP_005729059.1 3572837 R 591020 CDS YP_005729060.1 384544996 12319628 complement(3575303..3576736) 1 NC_017328.1 Glycogen synthase 3576736 glgA 12319628 glgA Shigella flexneri 2002017 Glycogen synthase YP_005729060.1 3575303 R 591020 CDS YP_005729061.1 384544997 12319629 complement(3576736..3578031) 1 NC_017328.1 glucose-1-phosphate adenylyltransferase 3578031 glgC 12319629 glgC Shigella flexneri 2002017 glucose-1-phosphate adenylyltransferase YP_005729061.1 3576736 R 591020 CDS YP_005729062.1 384544998 12319630 complement(3578050..3580023) 1 NC_017328.1 Glycogen debranching enzyme 3580023 glgX 12319630 glgX Shigella flexneri 2002017 Glycogen debranching enzyme YP_005729062.1 3578050 R 591020 CDS YP_005729063.1 384544999 12319631 complement(3580020..3582206) 1 NC_017328.1 1,4-alpha-glucan-branching protein 3582206 glgB 12319631 glgB Shigella flexneri 2002017 1,4-alpha-glucan-branching protein YP_005729063.1 3580020 R 591020 CDS YP_005729064.1 384545000 12319632 complement(3582479..3583582) 1 NC_017328.1 Aspartate-semialdehyde dehydrogenase 3583582 asd 12319632 asd Shigella flexneri 2002017 Aspartate-semialdehyde dehydrogenase YP_005729064.1 3582479 R 591020 CDS YP_005729065.1 384545001 12319633 3583774..3584367 1 NC_017328.1 inner membrane protein yhgN 3584367 yhgN 12319633 yhgN Shigella flexneri 2002017 inner membrane protein yhgN YP_005729065.1 3583774 D 591020 CDS YP_005729066.1 384545002 12319634 complement(3584424..3585764) 1 NC_017328.1 Low-affinity gluconate transport permease protein 3585764 gntU 12319634 gntU Shigella flexneri 2002017 Low-affinity gluconate transport permease protein YP_005729066.1 3584424 R 591020 CDS YP_005729067.1 384545003 12319635 complement(3585768..3586295) 1 NC_017328.1 Thermoresistant gluconokinase 3586295 gntK 12319635 gntK Shigella flexneri 2002017 Thermoresistant gluconokinase YP_005729067.1 3585768 R 591020 CDS YP_005729068.1 384545004 12319636 complement(3586434..3587429) 1 NC_017328.1 HTH-type transcriptional regulator gntR 3587429 gntR 12319636 gntR Shigella flexneri 2002017 HTH-type transcriptional regulator gntR YP_005729068.1 3586434 R 591020 CDS YP_005729069.1 384545005 12319637 complement(3587653..3588348) 1 NC_017328.1 hypothetical protein 3588348 yhhW 12319637 yhhW Shigella flexneri 2002017 hypothetical protein YP_005729069.1 3587653 R 591020 CDS YP_005729070.1 384545006 12319638 complement(3588471..3589508) 1 NC_017328.1 putative regulator 3589508 yhhX 12319638 yhhX Shigella flexneri 2002017 putative regulator YP_005729070.1 3588471 R 591020 CDS YP_005729071.1 384545007 12319639 3589763..3590329 1 NC_017328.1 putative acetyltransferase yhhY 3590329 yhhY 12319639 yhhY Shigella flexneri 2002017 putative acetyltransferase yhhY YP_005729071.1 3589763 D 591020 CDS YP_005729072.1 384545008 12319640 complement(3590388..3592130) 1 NC_017328.1 gamma-glutamyltranspeptidase 3592130 ggt 12319640 ggt Shigella flexneri 2002017 gamma-glutamyltranspeptidase YP_005729072.1 3590388 R 591020 CDS YP_005729073.1 384545009 12319641 3592250..3592690 1 NC_017328.1 hypothetical protein 3592690 yhhA 12319641 yhhA Shigella flexneri 2002017 hypothetical protein YP_005729073.1 3592250 D 591020 CDS YP_005729074.1 384545010 12319642 complement(3592677..3593420) 1 NC_017328.1 Glycerophosphodiester phosphodiesterase 3593420 ugpQ 12319642 ugpQ Shigella flexneri 2002017 Glycerophosphodiester phosphodiesterase YP_005729074.1 3592677 R 591020 CDS YP_005729075.1 384545011 12319643 complement(3593442..3594329) 1 NC_017328.1 sn-glycerol-3-phosphate transport ATP-binding protein 3594329 ugpC 12319643 ugpC Shigella flexneri 2002017 sn-glycerol-3-phosphate transport ATP-binding protein YP_005729075.1 3593442 R 591020 CDS YP_005729076.1 384545012 12319644 complement(3594409..3595254) 1 NC_017328.1 sn-glycerol-3-phosphate transport system permease protein ugpE 3595254 ugpE 12319644 ugpE Shigella flexneri 2002017 sn-glycerol-3-phosphate transport system permease protein ugpE YP_005729076.1 3594409 R 591020 CDS YP_005729077.1 384545013 12319645 complement(3595251..3596138) 1 NC_017328.1 sn-glycerol-3-phosphate transport system permease protein ugpA 3596138 ugpA 12319645 ugpA Shigella flexneri 2002017 sn-glycerol-3-phosphate transport system permease protein ugpA YP_005729077.1 3595251 R 591020 CDS YP_005729078.1 384545014 12319646 complement(3596236..3597552) 1 NC_017328.1 sn-glycerol 3-phosphate ABC transporter substrate-binding protein 3597552 ugpB 12319646 ugpB Shigella flexneri 2002017 sn-glycerol 3-phosphate ABC transporter substrate-binding protein YP_005729078.1 3596236 R 591020 CDS YP_005729079.1 384545015 12319647 complement(3597949..3598662) 1 NC_017328.1 high-affinity branched-chain amino acid transport ATP-binding protein livF 3598662 livF 12319647 livF Shigella flexneri 2002017 high-affinity branched-chain amino acid transport ATP-binding protein livF YP_005729079.1 3597949 R 591020 CDS YP_005729080.1 384545016 12319648 complement(3598664..3599431) 1 NC_017328.1 High-affinity branched-chain amino acid transport ATP-binding protein livG 3599431 livG 12319648 livG Shigella flexneri 2002017 High-affinity branched-chain amino acid transport ATP-binding protein livG YP_005729080.1 3598664 R 591020 CDS YP_005729081.1 384545017 12319649 complement(3599428..3600705) 1 NC_017328.1 High-affinity branched-chain amino acid transport protein, membrane component 3600705 livM 12319649 livM Shigella flexneri 2002017 High-affinity branched-chain amino acid transport protein, membrane component YP_005729081.1 3599428 R 591020 CDS YP_005729082.1 384545018 12319650 complement(3600702..3601628) 1 NC_017328.1 High-affinity branched-chain amino acid transport protein, membrane component 3601628 livH 12319650 livH Shigella flexneri 2002017 High-affinity branched-chain amino acid transport protein, membrane component YP_005729082.1 3600702 R 591020 CDS YP_005729083.1 384545019 12319651 complement(3601676..3602839) 1 NC_017328.1 High-affinity leucine-specific transport protein, periplasmic binding protein 3602839 livK 12319651 livK Shigella flexneri 2002017 High-affinity leucine-specific transport protein, periplasmic binding protein YP_005729083.1 3601676 R 591020 CDS YP_005729084.1 384545020 12319652 3603209..3603592 1 NC_017328.1 N-acetyltransferase GCN5 3603592 yhhK 12319652 yhhK Shigella flexneri 2002017 N-acetyltransferase GCN5 YP_005729084.1 3603209 D 591020 CDS YP_005729085.1 384545021 12319653 complement(3603791..3604951) 1 NC_017328.1 High-affinity amino acid transport protein, periplasmic binding protein 3604951 livJ 12319653 livJ Shigella flexneri 2002017 High-affinity amino acid transport protein, periplasmic binding protein YP_005729085.1 3603791 R 591020 CDS YP_005729086.1 384545022 12319654 complement(3605165..3606019) 1 NC_017328.1 Sigma(32) factor of RNA polymerase 3606019 rpoH 12319654 rpoH Shigella flexneri 2002017 Sigma(32) factor of RNA polymerase YP_005729086.1 3605165 R 591020 CDS YP_005729087.1 384545023 12319655 complement(3606264..3607322) 1 NC_017328.1 Cell division protein ftsX 3607322 ftsX 12319655 ftsX Shigella flexneri 2002017 Cell division protein ftsX YP_005729087.1 3606264 R 591020 CDS YP_005729088.1 384545024 12319656 complement(3607315..3607983) 1 NC_017328.1 Cell division ATP-binding protein ftsE 3607983 ftsE 12319656 ftsE Shigella flexneri 2002017 Cell division ATP-binding protein ftsE YP_005729088.1 3607315 R 591020 CDS YP_005729089.1 384545025 12319657 complement(3607986..3609482) 1 NC_017328.1 Cell division membrane protein 3609482 ftsY 12319657 ftsY Shigella flexneri 2002017 Cell division membrane protein YP_005729089.1 3607986 R 591020 CDS YP_005729090.1 384545026 12319658 3609632..3610228 1 NC_017328.1 putative N6-adenine-specific methylase 3610228 rsmD 12319658 rsmD Shigella flexneri 2002017 putative N6-adenine-specific methylase YP_005729090.1 3609632 D 591020 CDS YP_005729091.1 384545027 12319659 3610218..3610487 1 NC_017328.1 overlaps previous ORF, probably uses downstream start 3610487 yhhL 12319659 yhhL Shigella flexneri 2002017 overlaps previous ORF, probably uses downstream start YP_005729091.1 3610218 D 591020 CDS YP_005729092.1 384545028 12319660 complement(3610490..3610849) 1 NC_017328.1 hypothetical protein 3610849 yhhM 12319660 yhhM Shigella flexneri 2002017 hypothetical protein YP_005729092.1 3610490 R 591020 CDS YP_005729093.1 384545029 12319661 3610990..3611616 1 NC_017328.1 putative membrane protein yhhN 3611616 yhhN 12319661 yhhN Shigella flexneri 2002017 putative membrane protein yhhN YP_005729093.1 3610990 D 591020 CDS YP_005729094.1 384545030 12319662 3611690..3613888 1 NC_017328.1 Zinc-transporting ATPase 3613888 zntA 12319662 zntA Shigella flexneri 2002017 Zinc-transporting ATPase YP_005729094.1 3611690 D 591020 CDS YP_005729095.1 384545031 12319663 complement(3613990..3614235) 1 NC_017328.1 Sulfurtransferase tusA 3614235 sirA 12319663 sirA Shigella flexneri 2002017 Sulfurtransferase tusA YP_005729095.1 3613990 R 591020 CDS YP_005729096.1 384545032 12319664 3614456..3615121 1 NC_017328.1 Inner membrane protein yhhQ 3615121 yhhQ 12319664 yhhQ Shigella flexneri 2002017 Inner membrane protein yhhQ YP_005729096.1 3614456 D 591020 CDS YP_005729097.1 384545033 12319665 3615194..3615751 1 NC_017328.1 hypothetical protein 3615751 12319665 SFxv_3806 Shigella flexneri 2002017 hypothetical protein YP_005729097.1 3615194 D 591020 CDS YP_005729098.1 384545034 12319666 complement(3615755..3617014) 1 NC_017328.1 putative transport 3617014 yhhS 12319666 yhhS Shigella flexneri 2002017 putative transport YP_005729098.1 3615755 R 591020 CDS YP_005729099.1 384545035 12319667 3617106..3618155 1 NC_017328.1 hypothetical protein 3618155 12319667 SFxv_3808 Shigella flexneri 2002017 hypothetical protein YP_005729099.1 3617106 D 591020 CDS YP_005729100.1 384545036 12319668 3618210..3618797 1 NC_017328.1 4'-phosphopantetheinyl transferase 3618797 acpT 12319668 acpT Shigella flexneri 2002017 4'-phosphopantetheinyl transferase YP_005729100.1 3618210 D 591020 CDS YP_005729101.1 384545037 12319669 3618908..3620482 1 NC_017328.1 Periplasmic binding protein for nickel 3620482 nikA 12319669 nikA Shigella flexneri 2002017 Periplasmic binding protein for nickel YP_005729101.1 3618908 D 591020 CDS YP_005729102.1 384545038 12319670 3620482..3621426 1 NC_017328.1 Transport of nickel, membrane protein 3621426 nikB 12319670 nikB Shigella flexneri 2002017 Transport of nickel, membrane protein YP_005729102.1 3620482 D 591020 CDS YP_005729103.1 384545039 12319671 3621423..3622256 1 NC_017328.1 Transport of nickel, membrane protein 3622256 nikC 12319671 nikC Shigella flexneri 2002017 Transport of nickel, membrane protein YP_005729103.1 3621423 D 591020 CDS YP_005729104.1 384545040 12319672 3622256..3623020 1 NC_017328.1 Nickel import ATP-binding protein nikD 3623020 nikD 12319672 nikD Shigella flexneri 2002017 Nickel import ATP-binding protein nikD YP_005729104.1 3622256 D 591020 CDS YP_005729105.1 384545041 12319673 3623017..3623823 1 NC_017328.1 Nickel import ATP-binding protein nikE 3623823 nikE 12319673 nikE Shigella flexneri 2002017 Nickel import ATP-binding protein nikE YP_005729105.1 3623017 D 591020 CDS YP_005729106.1 384545042 12319674 3623829..3624230 1 NC_017328.1 Nickel-responsive regulator 3624230 nikR 12319674 nikR Shigella flexneri 2002017 Nickel-responsive regulator YP_005729106.1 3623829 D 591020 CDS YP_005729107.1 384545043 12319675 complement(3624350..3624709) 1 NC_017328.1 HicB family protein 3624709 12319675 SFxv_3816 Shigella flexneri 2002017 HicB family protein YP_005729107.1 3624350 R 591020 CDS YP_005729108.1 384545044 12319676 complement(3625040..3626167) 1 NC_017328.1 ABC transporter ATP-binding protein 3626167 yhhJ 12319676 yhhJ Shigella flexneri 2002017 ABC transporter ATP-binding protein YP_005729108.1 3625040 R 591020 CDS YP_005729109.1 384545045 12319677 complement(3626164..3628899) 1 NC_017328.1 ATPase 3628899 rbbA 12319677 rbbA Shigella flexneri 2002017 ATPase YP_005729109.1 3626164 R 591020 CDS YP_005729110.1 384545046 12319678 complement(3628896..3629963) 1 NC_017328.1 Auxiliary transport protein, membrane fusion protein (MFP) family 3629963 yhiI 12319678 yhiI Shigella flexneri 2002017 Auxiliary transport protein, membrane fusion protein (MFP) family YP_005729110.1 3628896 R 591020 CDS YP_005729111.1 384545047 12319679 complement(3630329..3631951) 1 NC_017328.1 hypothetical protein 3631951 12319679 SFxv_3820 Shigella flexneri 2002017 hypothetical protein YP_005729111.1 3630329 R 591020 CDS YP_005729112.1 384545048 12319680 complement(3632213..3633916) 1 NC_017328.1 hypothetical protein 3633916 12319680 SFxv_3821 Shigella flexneri 2002017 hypothetical protein YP_005729112.1 3632213 R 591020 CDS YP_005729113.1 384545049 12319682 complement(3635304..3635780) 1 NC_017328.1 hypothetical protein 3635780 12319682 SFxv_3823 Shigella flexneri 2002017 hypothetical protein YP_005729113.1 3635304 R 591020 CDS YP_005729114.1 384545050 12319683 complement(3635773..3636537) 1 NC_017328.1 Transcriptional regulator, CadC 3636537 12319683 SFxv_3824 Shigella flexneri 2002017 Transcriptional regulator, CadC YP_005729114.1 3635773 R 591020 CDS YP_005729115.1 384545051 12319685 complement(3637651..3638163) 1 NC_017328.1 hypothetical protein 3638163 12319685 SFxv_3826 Shigella flexneri 2002017 hypothetical protein YP_005729115.1 3637651 R 591020 CDS YP_005729116.1 384545052 12319686 complement(3638302..3639450) 1 NC_017328.1 putative fimbriae usher 3639450 12319686 SFxv_3827 Shigella flexneri 2002017 putative fimbriae usher YP_005729116.1 3638302 R 591020 CDS YP_005729117.1 384545053 12319689 complement(3639911..3640243) 1 NC_017328.1 putative IS2 ORF 3640243 12319689 SFxv_3830 Shigella flexneri 2002017 putative IS2 ORF YP_005729117.1 3639911 R 591020 CDS YP_005729118.1 384545054 12319690 complement(3641011..3642090) 1 NC_017328.1 putative fimbrial protein remnant 3642090 12319690 SFxv_3831 Shigella flexneri 2002017 putative fimbrial protein remnant YP_005729118.1 3641011 R 591020 CDS YP_005729119.1 384545055 12319691 complement(3642134..3642937) 1 NC_017328.1 Possible chaperone 3642937 12319691 SFxv_3832 Shigella flexneri 2002017 Possible chaperone YP_005729119.1 3642134 R 591020 CDS YP_005729120.1 384545056 12319692 complement(3643362..3644096) 1 NC_017328.1 hypothetical protein 3644096 12319692 SFxv_3833 Shigella flexneri 2002017 hypothetical protein YP_005729120.1 3643362 R 591020 CDS YP_005729121.1 384545057 12319693 complement(3644096..3645370) 1 NC_017328.1 hypothetical protein 3645370 12319693 SFxv_3834 Shigella flexneri 2002017 hypothetical protein YP_005729121.1 3644096 R 591020 CDS YP_005729122.1 384545058 12319694 3645386..3645685 1 NC_017328.1 ISSd1, transposase orfA/B, fusion 3645685 12319694 SFxv_3835 Shigella flexneri 2002017 ISSd1, transposase orfA/B, fusion YP_005729122.1 3645386 D 591020 CDS YP_005729123.1 384545059 12319695 complement(3645696..3646199) 1 NC_017328.1 IS1 orfB 3646199 12319695 SFxv_3836 Shigella flexneri 2002017 IS1 orfB YP_005729123.1 3645696 R 591020 CDS YP_005729124.1 384545060 12319696 3646313..3646516 1 NC_017328.1 IS150 ORF1 3646516 12319696 SFxv_3837 Shigella flexneri 2002017 IS150 ORF1 YP_005729124.1 3646313 D 591020 CDS YP_005729125.1 384545061 12319697 complement(3646922..3648121) 1 NC_017328.1 hypothetical protein 3648121 12319697 SFxv_3839 Shigella flexneri 2002017 hypothetical protein YP_005729125.1 3646922 R 591020 CDS YP_005729126.1 384545062 12319698 3648353..3649852 1 NC_017328.1 Low-affinity phosphate transport protein 3649852 pitA 12319698 pitA Shigella flexneri 2002017 Low-affinity phosphate transport protein YP_005729126.1 3648353 D 591020 CDS YP_005729127.1 384545063 12319699 complement(3649923..3650258) 1 NC_017328.1 Universal stress protein B 3650258 uspB 12319699 uspB Shigella flexneri 2002017 Universal stress protein B YP_005729127.1 3649923 R 591020 CDS YP_005729128.1 384545064 12319700 3650652..3651086 1 NC_017328.1 Universal stress protein A 3651086 uspA 12319700 uspA Shigella flexneri 2002017 Universal stress protein A YP_005729128.1 3650652 D 591020 CDS YP_005729129.1 384545065 12319701 3651422..3652570 1 NC_017328.1 Amino acid/peptide transporter 3652570 yhiP 12319701 yhiP Shigella flexneri 2002017 Amino acid/peptide transporter YP_005729129.1 3651422 D 591020 CDS YP_005729130.1 384545066 12319702 complement(3652922..3653674) 1 NC_017328.1 putative methyltransferase 3653674 yhiQ 12319702 yhiQ Shigella flexneri 2002017 putative methyltransferase YP_005729130.1 3652922 R 591020 CDS YP_005729131.1 384545067 12319703 complement(3653682..3655724) 1 NC_017328.1 putative Zn-dependent oligopeptidase 3655724 prlC 12319703 prlC Shigella flexneri 2002017 putative Zn-dependent oligopeptidase YP_005729131.1 3653682 R 591020 CDS YP_005729132.1 384545068 12319704 3655876..3656769 1 NC_017328.1 DNA utilization protein YhiR 3656769 yhiR 12319704 yhiR Shigella flexneri 2002017 DNA utilization protein YhiR YP_005729132.1 3655876 D 591020 CDS YP_005729133.1 384545069 12319705 3656841..3658193 1 NC_017328.1 Glutathione oxidoreductase 3658193 gor 12319705 gor Shigella flexneri 2002017 Glutathione oxidoreductase YP_005729133.1 3656841 D 591020 CDS YP_005729134.1 384545070 12319706 3658358..3658531 1 NC_017328.1 hypothetical protein 3658531 12319706 SFxv_3849 Shigella flexneri 2002017 hypothetical protein YP_005729134.1 3658358 D 591020 CDS YP_005729135.1 384545071 12319707 complement(3659106..3659609) 1 NC_017328.1 IS1 orfB 3659609 12319707 SFxv_3850 Shigella flexneri 2002017 IS1 orfB YP_005729135.1 3659106 R 591020 CDS YP_005729136.1 384545072 12319708 3659723..3660127 1 NC_017328.1 putative alpha-mannosidase 3660127 12319708 SFxv_3851 Shigella flexneri 2002017 putative alpha-mannosidase YP_005729136.1 3659723 D 591020 CDS YP_005729137.1 384545073 12319709 complement(3659959..3660384) 1 NC_017328.1 Arsenate reductase 3660384 12319709 SFxv_3852 Shigella flexneri 2002017 Arsenate reductase YP_005729137.1 3659959 R 591020 CDS YP_005729138.1 384545074 12319710 complement(3660397..3661707) 1 NC_017328.1 putative Na+/H+ antiporter NhaD-like arsenite permease 3661707 12319710 SFxv_3853 Shigella flexneri 2002017 putative Na+/H+ antiporter NhaD-like arsenite permease YP_005729138.1 3660397 R 591020 CDS YP_005729139.1 384545075 12319711 complement(3662050..3662259) 1 NC_017328.1 IS150 ORF1 3662259 12319711 SFxv_3854 Shigella flexneri 2002017 IS150 ORF1 YP_005729139.1 3662050 R 591020 CDS YP_005729140.1 384545076 12319712 3662334..3662837 1 NC_017328.1 IS1 orfB 3662837 12319712 SFxv_3855 Shigella flexneri 2002017 IS1 orfB YP_005729140.1 3662334 D 591020 CDS YP_005729141.1 384545077 12319713 3662862..3663824 1 NC_017328.1 putative membrane transport protein 3663824 12319713 SFxv_3856 Shigella flexneri 2002017 putative membrane transport protein YP_005729141.1 3662862 D 591020 CDS YP_005729142.1 384545078 12319714 3664405..3665628 1 NC_017328.1 hypothetical protein 3665628 12319714 SFxv_3858 Shigella flexneri 2002017 hypothetical protein YP_005729142.1 3664405 D 591020 CDS YP_005729143.1 384545079 12319715 3665710..3666441 1 NC_017328.1 Outer membrane protein induced after carbon starvation 3666441 slp 12319715 slp Shigella flexneri 2002017 Outer membrane protein induced after carbon starvation YP_005729143.1 3665710 D 591020 CDS YP_005729144.1 384545080 12319716 3666597..3667127 1 NC_017328.1 HTH-type transcriptional regulator dctR 3667127 dctR 12319716 dctR Shigella flexneri 2002017 HTH-type transcriptional regulator dctR YP_005729144.1 3666597 D 591020 CDS YP_005729145.1 384545081 12319718 complement(3667879..3668217) 1 NC_017328.1 acid-resistance protein 3668217 hdeB 12319718 hdeB Shigella flexneri 2002017 acid-resistance protein YP_005729145.1 3667879 R 591020 CDS YP_005729146.1 384545082 12319719 complement(3668321..3668653) 1 NC_017328.1 Hns-dependent expression protein HdeA 3668653 hdeA 12319719 hdeA Shigella flexneri 2002017 Hns-dependent expression protein HdeA YP_005729146.1 3668321 R 591020 CDS YP_005729147.1 384545083 12319720 3668908..3669480 1 NC_017328.1 acid-resistance membrane protein 3669480 hdeD 12319720 hdeD Shigella flexneri 2002017 acid-resistance membrane protein YP_005729147.1 3668908 D 591020 CDS YP_005729148.1 384545084 12319721 3670279..3670806 1 NC_017328.1 Transcriptional regulator gadE 3670806 gadE 12319721 gadE Shigella flexneri 2002017 Transcriptional regulator gadE YP_005729148.1 3670279 D 591020 CDS YP_005729149.1 384545085 12319722 3671145..3672062 1 NC_017328.1 Multidrug resistance protein mdtE precursor 3672062 mdtE-1 12319722 mdtE-1 Shigella flexneri 2002017 Multidrug resistance protein mdtE precursor YP_005729149.1 3671145 D 591020 CDS YP_005729150.1 384545086 12319723 complement(3672203..3672706) 1 NC_017328.1 IS1 ORF2 3672706 12319723 SFxv_3867 Shigella flexneri 2002017 IS1 ORF2 YP_005729150.1 3672203 R 591020 CDS YP_005729151.1 384545087 12319724 3672820..3672960 1 NC_017328.1 IS600 ORF2 3672960 12319724 SFxv_3868 Shigella flexneri 2002017 IS600 ORF2 YP_005729151.1 3672820 D 591020 CDS YP_005729152.1 384545088 12319725 3673171..3674820 1 NC_017328.1 Cytoplasmic trehalase 3674820 treF 12319725 treF Shigella flexneri 2002017 Cytoplasmic trehalase YP_005729152.1 3673171 D 591020 CDS YP_005729153.1 384545089 12319726 3674947..3676293 1 NC_017328.1 IS4 ORF 3676293 12319726 SFxv_3870 Shigella flexneri 2002017 IS4 ORF YP_005729153.1 3674947 D 591020 CDS YP_005729154.1 384545090 12319727 complement(3676309..3676911) 1 NC_017328.1 putative HTH-type transcriptional regulator yhjB 3676911 yhjB 12319727 yhjB Shigella flexneri 2002017 putative HTH-type transcriptional regulator yhjB YP_005729154.1 3676309 R 591020 CDS YP_005729155.1 384545091 12319728 3677359..3678330 1 NC_017328.1 putative transcriptional regulator LYSR-type 3678330 yhjC 12319728 yhjC Shigella flexneri 2002017 putative transcriptional regulator LYSR-type YP_005729155.1 3677359 D 591020 CDS YP_005729156.1 384545092 12319729 3678379..3679392 1 NC_017328.1 hypothetical protein 3679392 yhjD 12319729 yhjD Shigella flexneri 2002017 hypothetical protein YP_005729156.1 3678379 D 591020 CDS YP_005729157.1 384545093 12319730 3679803..3681125 1 NC_017328.1 putative transport protein 3681125 yhjE 12319730 yhjE Shigella flexneri 2002017 putative transport protein YP_005729157.1 3679803 D 591020 CDS YP_005729158.1 384545094 12319731 complement(3681344..3683368) 1 NC_017328.1 outer membrane biogenesis protein 3683368 yhjG 12319731 yhjG Shigella flexneri 2002017 outer membrane biogenesis protein YP_005729158.1 3681344 R 591020 CDS YP_005729159.1 384545095 12319732 complement(3683438..3684208) 1 NC_017328.1 EAL domain containing protein involved in flagellar function 3684208 yhjH 12319732 yhjH Shigella flexneri 2002017 EAL domain containing protein involved in flagellar function YP_005729159.1 3683438 R 591020 CDS YP_005729160.1 384545096 12319733 3684218..3685366 1 NC_017328.1 Ketodeoxygluconokinase 3685366 kdgK 12319733 kdgK Shigella flexneri 2002017 Ketodeoxygluconokinase YP_005729160.1 3684218 D 591020 CDS YP_005729161.1 384545097 12319734 complement(3685462..3686958) 1 NC_017328.1 putative Zn-dependent peptidase 3686958 yhjJ 12319734 yhjJ Shigella flexneri 2002017 putative Zn-dependent peptidase YP_005729161.1 3685462 R 591020 CDS YP_005729162.1 384545098 12319735 complement(3687179..3688465) 1 NC_017328.1 Aerobic C4-dicarboxylate transport protein 3688465 dctA 12319735 dctA Shigella flexneri 2002017 Aerobic C4-dicarboxylate transport protein YP_005729162.1 3687179 R 591020 CDS YP_005729163.1 384545099 12319736 complement(3688656..3690644) 1 NC_017328.1 diguanylate cyclase/phosphodiesterase 3690644 yhjK 12319736 yhjK Shigella flexneri 2002017 diguanylate cyclase/phosphodiesterase YP_005729163.1 3688656 R 591020 CDS YP_005729164.1 384545100 12319737 complement(3690726..3690839) 1 NC_017328.1 cellulose synthase subunit BcsC 3690839 bcsC 12319737 bcsC Shigella flexneri 2002017 cellulose synthase subunit BcsC YP_005729164.1 3690726 R 591020 CDS YP_005729165.1 384545101 12319738 complement(3690892..3691233) 1 NC_017328.1 cellulose synthase subunit BcsC 3691233 12319738 SFxv_3884 Shigella flexneri 2002017 cellulose synthase subunit BcsC YP_005729165.1 3690892 R 591020 CDS YP_005729166.1 384545102 12319739 complement(3691310..3692416) 1 NC_017328.1 putative endoglucanase 3692416 bcsZ 12319739 bcsZ Shigella flexneri 2002017 putative endoglucanase YP_005729166.1 3691310 R 591020 CDS YP_005729167.1 384545103 12319740 complement(3692423..3694762) 1 NC_017328.1 Cellulose synthase, subunit B precursor 3694762 bcsB 12319740 bcsB Shigella flexneri 2002017 Cellulose synthase, subunit B precursor YP_005729167.1 3692423 R 591020 CDS YP_005729168.1 384545104 12319742 complement(3697387..3698115) 1 NC_017328.1 putative ATPases involved in chromosome partitioning 3698115 12319742 SFxv_3888 Shigella flexneri 2002017 putative ATPases involved in chromosome partitioning YP_005729168.1 3697387 R 591020 CDS YP_005729169.1 384545105 12319743 complement(3698151..3698339) 1 NC_017328.1 hypothetical protein 3698339 yhjR 12319743 yhjR Shigella flexneri 2002017 hypothetical protein YP_005729169.1 3698151 R 591020 CDS YP_005729170.1 384545106 12319744 3698612..3700183 1 NC_017328.1 putative protease 3700183 bcsE 12319744 bcsE Shigella flexneri 2002017 putative protease YP_005729170.1 3698612 D 591020 CDS YP_005729171.1 384545107 12319745 3700180..3700371 1 NC_017328.1 hypothetical protein 3700371 12319745 SFxv_3891 Shigella flexneri 2002017 hypothetical protein YP_005729171.1 3700180 D 591020 CDS YP_005729172.1 384545108 12319746 3700368..3702047 1 NC_017328.1 hypothetical protein 3702047 12319746 SFxv_3892 Shigella flexneri 2002017 hypothetical protein YP_005729172.1 3700368 D 591020 CDS YP_005729173.1 384545109 12319747 complement(3702134..3702301) 1 NC_017328.1 hypothetical protein 3702301 12319747 SFxv_3893 Shigella flexneri 2002017 hypothetical protein YP_005729173.1 3702134 R 591020 CDS YP_005729174.1 384545110 12319748 complement(3702617..3702784) 1 NC_017328.1 hypothetical protein 3702784 12319748 SFxv_3894 Shigella flexneri 2002017 hypothetical protein YP_005729174.1 3702617 R 591020 CDS YP_005729175.1 384545111 12319749 3704103..3705437 1 NC_017328.1 putative transporter protein 3705437 yhjV 12319749 yhjV Shigella flexneri 2002017 putative transporter protein YP_005729175.1 3704103 D 591020 CDS YP_005729176.1 384545112 12319750 complement(3705467..3706471) 1 NC_017328.1 putative ATP-binding component of dipeptide transport system 3706471 dppF 12319750 dppF Shigella flexneri 2002017 putative ATP-binding component of dipeptide transport system YP_005729176.1 3705467 R 591020 CDS YP_005729177.1 384545113 12319751 complement(3706468..3707451) 1 NC_017328.1 Dipeptide transport ATP-binding protein dppD 3707451 dppD 12319751 dppD Shigella flexneri 2002017 Dipeptide transport ATP-binding protein dppD YP_005729177.1 3706468 R 591020 CDS YP_005729178.1 384545114 12319752 complement(3707462..3708364) 1 NC_017328.1 Dipeptide transport system permease protein 2 3708364 dppC 12319752 dppC Shigella flexneri 2002017 Dipeptide transport system permease protein 2 YP_005729178.1 3707462 R 591020 CDS YP_005729179.1 384545115 12319753 complement(3708374..3709393) 1 NC_017328.1 Dipeptide transport system permease protein 1 3709393 dppB 12319753 dppB Shigella flexneri 2002017 Dipeptide transport system permease protein 1 YP_005729179.1 3708374 R 591020 CDS YP_005729180.1 384545116 12319754 3709498..3709638 1 NC_017328.1 hypothetical protein 3709638 12319754 SFxv_3901 Shigella flexneri 2002017 hypothetical protein YP_005729180.1 3709498 D 591020 CDS YP_005729181.1 384545117 12319755 complement(3709701..3711308) 1 NC_017328.1 Periplasmic dipeptide transport protein precursor 3711308 dppA 12319755 dppA Shigella flexneri 2002017 Periplasmic dipeptide transport protein precursor YP_005729181.1 3709701 R 591020 CDS YP_005729182.1 384545118 12319756 complement(3711660..3711785) 1 NC_017328.1 hypothetical protein 3711785 12319756 SFxv_3903 Shigella flexneri 2002017 hypothetical protein YP_005729182.1 3711660 R 591020 CDS YP_005729183.1 384545119 12319758 complement(3712220..3713911) 1 NC_017328.1 phosphoethanolamine transferase 3713911 eptB 12319758 eptB Shigella flexneri 2002017 phosphoethanolamine transferase YP_005729183.1 3712220 R 591020 CDS YP_005729184.1 384545120 12316600 complement(3714235..3715443) 1 NC_017328.1 putative permeases of the major facilitator superfamily 3715443 yhjX 12316600 yhjX Shigella flexneri 2002017 putative permeases of the major facilitator superfamily YP_005729184.1 3714235 R 591020 CDS YP_005729185.1 384545121 12316601 complement(3715672..3716376) 1 NC_017328.1 putative lipase 3716376 yhjY 12316601 yhjY Shigella flexneri 2002017 putative lipase YP_005729185.1 3715672 R 591020 CDS YP_005729186.1 384545122 12316602 3716363..3717091 1 NC_017328.1 3-methyladenine DNA glycosylase 3717091 tag 12316602 tag Shigella flexneri 2002017 3-methyladenine DNA glycosylase YP_005729186.1 3716363 D 591020 CDS YP_005729187.1 384545123 12316603 3717088..3717528 1 NC_017328.1 N-acetyltransferase GCN5 3717528 yiaC 12316603 yiaC Shigella flexneri 2002017 N-acetyltransferase GCN5 YP_005729187.1 3717088 D 591020 CDS YP_005729188.1 384545124 12316604 complement(3717497..3719695) 1 NC_017328.1 biotin sulfoxide reductase 3719695 bisC 12316604 bisC Shigella flexneri 2002017 biotin sulfoxide reductase YP_005729188.1 3717497 R 591020 CDS YP_005729189.1 384545125 12316605 3719858..3720508 1 NC_017328.1 putative outer membrane protein 3720508 yiaD 12316605 yiaD Shigella flexneri 2002017 putative outer membrane protein YP_005729189.1 3719858 D 591020 CDS YP_005729190.1 384545126 12316606 3720612..3721586 1 NC_017328.1 putative dehydrogenase 3721586 ghrB 12316606 ghrB Shigella flexneri 2002017 putative dehydrogenase YP_005729190.1 3720612 D 591020 CDS YP_005729191.1 384545127 12316607 complement(3721636..3722466) 1 NC_017328.1 putative lipoprotein 3722466 yiaF 12316607 yiaF Shigella flexneri 2002017 putative lipoprotein YP_005729191.1 3721636 R 591020 CDS YP_005729192.1 384545128 12316608 3723351..3723563 1 NC_017328.1 Cold-shock DNA-binding protein family 3723563 cspA 12316608 cspA Shigella flexneri 2002017 Cold-shock DNA-binding protein family YP_005729192.1 3723351 D 591020 CDS YP_005729193.1 384545129 12316609 complement(3723750..3723902) 1 NC_017328.1 putative membrane permeability altering protein 3723902 hokA 12316609 hokA Shigella flexneri 2002017 putative membrane permeability altering protein YP_005729193.1 3723750 R 591020 CDS YP_005729194.1 384545130 12316610 complement(3724004..3724855) 1 NC_017328.1 IS150 ORF2 3724855 12316610 SFxv_3915 Shigella flexneri 2002017 IS150 ORF2 YP_005729194.1 3724004 R 591020 CDS YP_005729195.1 384545131 12316611 complement(3724852..3725520) 1 NC_017328.1 IS150 ORF1 3725520 12316611 SFxv_3916 Shigella flexneri 2002017 IS150 ORF1 YP_005729195.1 3724852 R 591020 CDS YP_005729196.1 384545132 12316612 3725595..3726098 1 NC_017328.1 IS1 ORF2 3726098 12316612 SFxv_3917 Shigella flexneri 2002017 IS1 ORF2 YP_005729196.1 3725595 D 591020 CDS YP_005729197.1 384545133 12316613 3726157..3727554 1 NC_017328.1 putative cytochrome C peroxidase 3727554 yhjA 12316613 yhjA Shigella flexneri 2002017 putative cytochrome C peroxidase YP_005729197.1 3726157 D 591020 CDS YP_005729198.1 384545134 12316614 3727765..3729165 1 NC_017328.1 Glutamate decarboxylase alpha 3729165 gadA 12316614 gadA Shigella flexneri 2002017 Glutamate decarboxylase alpha YP_005729198.1 3727765 D 591020 CDS YP_005729199.1 384545135 12316615 3729535..3730359 1 NC_017328.1 HTH-type transcriptional regulator gadX 3730359 gadX 12316615 gadX Shigella flexneri 2002017 HTH-type transcriptional regulator gadX YP_005729199.1 3729535 D 591020 CDS YP_005729200.1 384545136 12316616 3730727..3731455 1 NC_017328.1 HTH-type transcriptional regulator gadW 3731455 gadW 12316616 gadW Shigella flexneri 2002017 HTH-type transcriptional regulator gadW YP_005729200.1 3730727 D 591020 CDS YP_005729201.1 384545137 12316618 complement(3734956..3735252) 1 NC_017328.1 Multidrug resistance protein mdtE precursor 3735252 mdtE-2 12316618 mdtE-2 Shigella flexneri 2002017 Multidrug resistance protein mdtE precursor YP_005729201.1 3734956 R 591020 CDS YP_005729202.1 384545138 12316619 complement(3735376..3735597) 1 NC_017328.1 IS150 ORF1 3735597 12316619 SFxv_3924 Shigella flexneri 2002017 IS150 ORF1 YP_005729202.1 3735376 R 591020 CDS YP_005729203.1 384545139 12316620 3735672..3736175 1 NC_017328.1 IS1 ORF2 3736175 12316620 SFxv_3925 Shigella flexneri 2002017 IS1 ORF2 YP_005729203.1 3735672 D 591020 CDS YP_005729204.1 384545140 12316621 complement(3736233..3738302) 1 NC_017328.1 glycyl-tRNA synthetase subunit beta 3738302 glyS 12316621 glyS Shigella flexneri 2002017 glycyl-tRNA synthetase subunit beta YP_005729204.1 3736233 R 591020 CDS YP_005729205.1 384545141 12316622 complement(3738312..3739223) 1 NC_017328.1 glycyl-tRNA synthetase subunit alpha 3739223 glyQ 12316622 glyQ Shigella flexneri 2002017 glycyl-tRNA synthetase subunit alpha YP_005729205.1 3738312 R 591020 CDS YP_005729206.1 384545142 12316623 complement(3739318..3739617) 1 NC_017328.1 putative lipoprotein ysaB precursor 3739617 ysaB 12316623 ysaB Shigella flexneri 2002017 putative lipoprotein ysaB precursor YP_005729206.1 3739318 R 591020 CDS YP_005729207.1 384545143 12316624 3739792..3740787 1 NC_017328.1 Inner membrane protein yiaH 3740787 wecH 12316624 wecH Shigella flexneri 2002017 Inner membrane protein yiaH YP_005729207.1 3739792 D 591020 CDS YP_005729208.1 384545144 12316625 complement(3740829..3741269) 1 NC_017328.1 Inner membrane protein yiaA 3741269 yiaA 12316625 yiaA Shigella flexneri 2002017 Inner membrane protein yiaA YP_005729208.1 3740829 R 591020 CDS YP_005729209.1 384545145 12316626 complement(3741312..3741665) 1 NC_017328.1 hypothetical protein 3741665 yiaB 12316626 yiaB Shigella flexneri 2002017 hypothetical protein YP_005729209.1 3741312 R 591020 CDS YP_005729210.1 384545146 12316627 complement(3741822..3743276) 1 NC_017328.1 Xylulokinase 3743276 xylB 12316627 xylB Shigella flexneri 2002017 Xylulokinase YP_005729210.1 3741822 R 591020 CDS YP_005729211.1 384545147 12316629 3744958..3746028 1 NC_017328.1 Xylose binding protein transport system 3746028 xylF 12316629 xylF Shigella flexneri 2002017 Xylose binding protein transport system YP_005729211.1 3744958 D 591020 CDS YP_005729212.1 384545148 12316631 3747624..3748805 1 NC_017328.1 Xylose transport system permease protein xylH 3748805 xylH 12316631 xylH Shigella flexneri 2002017 Xylose transport system permease protein xylH YP_005729212.1 3747624 D 591020 CDS YP_005729213.1 384545149 12316633 complement(3750169..3750993) 1 NC_017328.1 putative ATP-binding protein 3750993 bax 12316633 bax Shigella flexneri 2002017 putative ATP-binding protein YP_005729213.1 3750169 R 591020 CDS YP_005729214.1 384545150 12316634 3751313..3753343 1 NC_017328.1 Alpha-amylase 3753343 malS 12316634 malS Shigella flexneri 2002017 Alpha-amylase YP_005729214.1 3751313 D 591020 CDS YP_005729215.1 384545151 12316636 complement(3754924..3755397) 1 NC_017328.1 4Fe-4S binding protein 3755397 ysaA 12316636 ysaA Shigella flexneri 2002017 4Fe-4S binding protein YP_005729215.1 3754924 R 591020 CDS YP_005729216.1 384545152 12316637 complement(3755499..3756347) 1 NC_017328.1 HTH-type transcriptional regulator yiaJ 3756347 yiaJ 12316637 yiaJ Shigella flexneri 2002017 HTH-type transcriptional regulator yiaJ YP_005729216.1 3755499 R 591020 CDS YP_005729217.1 384545153 12316638 3756547..3757545 1 NC_017328.1 2,3-diketo-L-gulonate reductase 3757545 yiaK 12316638 yiaK Shigella flexneri 2002017 2,3-diketo-L-gulonate reductase YP_005729217.1 3756547 D 591020 CDS YP_005729218.1 384545154 12316639 3757557..3757709 1 NC_017328.1 putative Beta-galactosidase, beta subunit 3757709 yiaL 12316639 yiaL Shigella flexneri 2002017 putative Beta-galactosidase, beta subunit YP_005729218.1 3757557 D 591020 CDS YP_005729219.1 384545155 12316640 3757954..3758457 1 NC_017328.1 IS1 ORF2 3758457 12316640 SFxv_3945 Shigella flexneri 2002017 IS1 ORF2 YP_005729219.1 3757954 D 591020 CDS YP_005729220.1 384545156 12316641 3758487..3758789 1 NC_017328.1 2,3-diketo-L-gulonate TRAP transporter small permease protein yiaM 3758789 yiaM 12316641 yiaM Shigella flexneri 2002017 2,3-diketo-L-gulonate TRAP transporter small permease protein yiaM YP_005729220.1 3758487 D 591020 CDS YP_005729221.1 384545157 12316642 3758792..3760084 1 NC_017328.1 hypothetical protein 3760084 yiaN 12316642 yiaN Shigella flexneri 2002017 hypothetical protein YP_005729221.1 3758792 D 591020 CDS YP_005729222.1 384545158 12316643 complement(3760010..3760237) 1 NC_017328.1 IS600 ORF2 3760237 12316643 SFxv_3948 Shigella flexneri 2002017 IS600 ORF2 YP_005729222.1 3760010 R 591020 CDS YP_005729223.1 384545159 12316644 3760312..3760815 1 NC_017328.1 IS1 ORF2 3760815 12316644 SFxv_3949 Shigella flexneri 2002017 IS1 ORF2 YP_005729223.1 3760312 D 591020 CDS YP_005729224.1 384545160 12316645 complement(3760826..3760966) 1 NC_017328.1 Inner membrane protein yiaW 3760966 yiaW 12316645 yiaW Shigella flexneri 2002017 Inner membrane protein yiaW YP_005729224.1 3760826 R 591020 CDS YP_005729225.1 384545161 12316646 3761080..3761292 1 NC_017328.1 hypothetical protein 3761292 12316646 SFxv_3951 Shigella flexneri 2002017 hypothetical protein YP_005729225.1 3761080 D 591020 CDS YP_005729226.1 384545162 12316647 complement(3761511..3763139) 1 NC_017328.1 Aldehyde dehydrogenase B 3763139 aldB 12316647 aldB Shigella flexneri 2002017 Aldehyde dehydrogenase B YP_005729226.1 3761511 R 591020 CDS YP_005729227.1 384545163 12316648 complement(3763214..3764365) 1 NC_017328.1 putative oxidoreductase 3764365 yiaY 12316648 yiaY Shigella flexneri 2002017 putative oxidoreductase YP_005729227.1 3763214 R 591020 CDS YP_005729228.1 384545164 12316649 complement(3764555..3766399) 1 NC_017328.1 Selenocysteinyl-tRNA-specific translation factor 3766399 selB 12316649 selB Shigella flexneri 2002017 Selenocysteinyl-tRNA-specific translation factor YP_005729228.1 3764555 R 591020 CDS YP_005729229.1 384545165 12316650 complement(3766396..3767787) 1 NC_017328.1 L-seryl-tRNA(Sec) selenium transferase 3767787 selA 12316650 selA Shigella flexneri 2002017 L-seryl-tRNA(Sec) selenium transferase YP_005729229.1 3766396 R 591020 CDS YP_005729230.1 384545166 12316651 complement(3767885..3768493) 1 NC_017328.1 putative S-transferase 3768493 yibF 12316651 yibF Shigella flexneri 2002017 putative S-transferase YP_005729230.1 3767885 R 591020 CDS YP_005729231.1 384545167 12316652 complement(3768564..3769649) 1 NC_017328.1 Inner membrane protein yibH 3769649 yibH 12316652 yibH Shigella flexneri 2002017 Inner membrane protein yibH YP_005729231.1 3768564 R 591020 CDS YP_005729232.1 384545168 12316653 complement(3769652..3770014) 1 NC_017328.1 Inner membrane protein yiaW 3770014 yibI 12316653 yibI Shigella flexneri 2002017 Inner membrane protein yiaW YP_005729232.1 3769652 R 591020 CDS YP_005729233.1 384545169 12316654 3770551..3772464 1 NC_017328.1 putative Phosphotransferase system, mannitol-specific IIBC component 3772464 mtlA 12316654 mtlA Shigella flexneri 2002017 putative Phosphotransferase system, mannitol-specific IIBC component YP_005729233.1 3770551 D 591020 CDS YP_005729234.1 384545170 12316655 3772385..3773707 1 NC_017328.1 Mannitol-1-phosphate 5-dehydrogenase 3773707 mtlD 12316655 mtlD Shigella flexneri 2002017 Mannitol-1-phosphate 5-dehydrogenase YP_005729234.1 3772385 D 591020 CDS YP_005729235.1 384545171 12316656 3773707..3774294 1 NC_017328.1 Repressor for mtl 3774294 mtlR 12316656 mtlR Shigella flexneri 2002017 Repressor for mtl YP_005729235.1 3773707 D 591020 CDS YP_005729236.1 384545172 12316657 complement(3774306..3774515) 1 NC_017328.1 putative cytoplasmic protein 3774515 yibT 12316657 yibT Shigella flexneri 2002017 putative cytoplasmic protein YP_005729236.1 3774306 R 591020 CDS YP_005729237.1 384545173 12316658 3774799..3775161 1 NC_017328.1 hypothetical protein 3775161 12316658 SFxv_3964 Shigella flexneri 2002017 hypothetical protein YP_005729237.1 3774799 D 591020 CDS YP_005729238.1 384545174 12316659 complement(3775280..3775783) 1 NC_017328.1 IS1 ORF2 3775783 12316659 SFxv_3965 Shigella flexneri 2002017 IS1 ORF2 YP_005729238.1 3775280 R 591020 CDS YP_005729239.1 384545175 12316660 3775897..3776079 1 NC_017328.1 IS600 ORF2 3776079 12316660 SFxv_3966 Shigella flexneri 2002017 IS600 ORF2 YP_005729239.1 3775897 D 591020 CDS YP_005729240.1 384545176 12316661 complement(3776267..3776410) 1 NC_017328.1 hypothetical protein 3776410 12316661 SFxv_3967 Shigella flexneri 2002017 hypothetical protein YP_005729240.1 3776267 R 591020 CDS YP_005729241.1 384545177 12316662 3776481..3777164 1 NC_017328.1 putative lipoprotein 3777164 12316662 SFxv_3968 Shigella flexneri 2002017 putative lipoprotein YP_005729241.1 3776481 D 591020 CDS YP_005729242.1 384545178 12316664 3782238..3783893 1 NC_017328.1 L-lactate permease 3783893 lldP 12316664 lldP Shigella flexneri 2002017 L-lactate permease YP_005729242.1 3782238 D 591020 CDS YP_005729243.1 384545179 12316665 3783878..3784669 1 NC_017328.1 putative L-lactate dehydrogenase operon regulatory protein 3784669 lldR 12316665 lldR Shigella flexneri 2002017 putative L-lactate dehydrogenase operon regulatory protein YP_005729243.1 3783878 D 591020 CDS YP_005729244.1 384545180 12316666 3784666..3785856 1 NC_017328.1 L-lactate dehydrogenase 3785856 lldD 12316666 lldD Shigella flexneri 2002017 L-lactate dehydrogenase YP_005729244.1 3784666 D 591020 CDS YP_005729245.1 384545181 12316667 3786051..3786524 1 NC_017328.1 putative tRNA/rRNA methyltransferase yibK 3786524 yibK 12316667 yibK Shigella flexneri 2002017 putative tRNA/rRNA methyltransferase yibK YP_005729245.1 3786051 D 591020 CDS YP_005729246.1 384545182 12316668 complement(3786577..3787398) 1 NC_017328.1 Serine acetyltransferase 3787398 cysE 12316668 cysE Shigella flexneri 2002017 Serine acetyltransferase YP_005729246.1 3786577 R 591020 CDS YP_005729247.1 384545183 12316669 complement(3787478..3788497) 1 NC_017328.1 NAD(P)H- dependent glycerol-3-phosphate dehydrogenase 3788497 gpsA 12316669 gpsA Shigella flexneri 2002017 NAD(P)H- dependent glycerol-3-phosphate dehydrogenase YP_005729247.1 3787478 R 591020 CDS YP_005729248.1 384545184 12316670 complement(3788497..3788964) 1 NC_017328.1 Protein-export protein SecB 3788964 secB 12316670 secB Shigella flexneri 2002017 Protein-export protein SecB YP_005729248.1 3788497 R 591020 CDS YP_005729249.1 384545185 12316671 complement(3789027..3789278) 1 NC_017328.1 glutaredoxin 3789278 grxC 12316671 grxC Shigella flexneri 2002017 glutaredoxin YP_005729249.1 3789027 R 591020 CDS YP_005729250.1 384545186 12316672 complement(3789420..3789851) 1 NC_017328.1 Rhodanese domain-containing protein 3789851 yibN 12316672 yibN Shigella flexneri 2002017 Rhodanese domain-containing protein YP_005729250.1 3789420 R 591020 CDS YP_005729251.1 384545187 12316673 3789994..3791640 1 NC_017328.1 putative 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 3791640 gpmM 12316673 gpmM Shigella flexneri 2002017 putative 2,3-bisphosphoglycerate-independent phosphoglycerate mutase YP_005729251.1 3789994 D 591020 CDS YP_005729252.1 384545188 12316674 3791650..3792933 1 NC_017328.1 hypothetical protein 3792933 envC 12316674 envC Shigella flexneri 2002017 hypothetical protein YP_005729252.1 3791650 D 591020 CDS YP_005729253.1 384545189 12316675 3792937..3793896 1 NC_017328.1 Polysaccharide deacetylase family protein 3793896 yibQ 12316675 yibQ Shigella flexneri 2002017 Polysaccharide deacetylase family protein YP_005729253.1 3792937 D 591020 CDS YP_005729254.1 384545190 12316676 complement(3793883..3794023) 1 NC_017328.1 putative glycosyltransferase 3794023 yibD 12316676 yibD Shigella flexneri 2002017 putative glycosyltransferase YP_005729254.1 3793883 R 591020 CDS YP_005729255.1 384545191 12316677 complement(3794105..3794608) 1 NC_017328.1 IS1 ORF2 3794608 12316677 SFxv_3983 Shigella flexneri 2002017 IS1 ORF2 YP_005729255.1 3794105 R 591020 CDS YP_005729256.1 384545192 12316678 3794722..3794865 1 NC_017328.1 putative integrase encoded by prophage CP-933K 3794865 12316678 SFxv_3984 Shigella flexneri 2002017 putative integrase encoded by prophage CP-933K YP_005729256.1 3794722 D 591020 CDS YP_005729257.1 384545193 12316679 complement(3795032..3796057) 1 NC_017328.1 L-threonine 3-dehydrogenase 3796057 tdh 12316679 tdh Shigella flexneri 2002017 L-threonine 3-dehydrogenase YP_005729257.1 3795032 R 591020 CDS YP_005729258.1 384545194 12316680 complement(3796067..3797263) 1 NC_017328.1 2-amino-3-ketobutyrate CoA ligase 3797263 kbl 12316680 kbl Shigella flexneri 2002017 2-amino-3-ketobutyrate CoA ligase YP_005729258.1 3796067 R 591020 CDS YP_005729259.1 384545195 12316762 complement(3797538..3798410) 1 NC_017328.1 Involved in lipopolysaccharide biosynthesis 3798410 htrL 12316762 htrL Shigella flexneri 2002017 Involved in lipopolysaccharide biosynthesis YP_005729259.1 3797538 R 591020 CDS YP_005729260.1 384545196 12316763 3798699..3799631 1 NC_017328.1 ADP-L-glycero-D-manno-heptose-6-epimerase 3799631 rfaD 12316763 rfaD Shigella flexneri 2002017 ADP-L-glycero-D-manno-heptose-6-epimerase YP_005729260.1 3798699 D 591020 CDS YP_005729261.1 384545197 12316764 3799641..3800687 1 NC_017328.1 ADP-heptose--lps heptosyltransferase II 3800687 rfaF 12316764 rfaF Shigella flexneri 2002017 ADP-heptose--lps heptosyltransferase II YP_005729261.1 3799641 D 591020 CDS YP_005729262.1 384545198 12316765 3800691..3801683 1 NC_017328.1 putative ADP-heptose:LPS heptosyltransferase 3801683 rfaC 12316765 rfaC Shigella flexneri 2002017 putative ADP-heptose:LPS heptosyltransferase YP_005729262.1 3800691 D 591020 CDS YP_005729263.1 384545199 12316766 3801680..3802888 1 NC_017328.1 Lipid A-core, surface polymer ligase 3802888 12316766 SFxv_3991 Shigella flexneri 2002017 Lipid A-core, surface polymer ligase YP_005729263.1 3801680 D 591020 CDS YP_005729264.1 384545200 12316767 complement(3802924..3804066) 1 NC_017328.1 Lipopolysaccharide 1,2-N-acetylglucosaminetransferase 3804066 12316767 SFxv_3992 Shigella flexneri 2002017 Lipopolysaccharide 1,2-N-acetylglucosaminetransferase YP_005729264.1 3802924 R 591020 CDS YP_005729265.1 384545201 12316768 complement(3804075..3805088) 1 NC_017328.1 Lipopolysaccharide 1,2-glucosyltransferase 3805088 12316768 SFxv_3993 Shigella flexneri 2002017 Lipopolysaccharide 1,2-glucosyltransferase YP_005729265.1 3804075 R 591020 CDS YP_005729266.1 384545202 12316769 complement(3805113..3805508) 1 NC_017328.1 putative LPS biosynthesis protein 3805508 12316769 SFxv_3994 Shigella flexneri 2002017 putative LPS biosynthesis protein YP_005729266.1 3805113 R 591020 CDS YP_005729267.1 384545203 12316770 complement(3805846..3806853) 1 NC_017328.1 UDP-D-galactose:(Glucosyl)lipopolysaccharide- alpha-1, 3-D- galactosyltransferase 3806853 12316770 SFxv_3995 Shigella flexneri 2002017 UDP-D-galactose:(Glucosyl)lipopolysaccharide- alpha-1, 3-D- galactosyltransferase YP_005729267.1 3805846 R 591020 CDS YP_005729268.1 384545204 12316771 complement(3806896..3807702) 1 NC_017328.1 Lipopolysaccharide core biosynthesis protein 3807702 12316771 SFxv_3996 Shigella flexneri 2002017 Lipopolysaccharide core biosynthesis protein YP_005729268.1 3806896 R 591020 CDS YP_005729269.1 384545205 12316772 complement(3807686..3808810) 1 NC_017328.1 LPS alpha1,3-glucosyltransferase 3808810 12316772 SFxv_3997 Shigella flexneri 2002017 LPS alpha1,3-glucosyltransferase YP_005729269.1 3807686 R 591020 CDS YP_005729270.1 384545206 12316773 complement(3808807..3809865) 1 NC_017328.1 putative ADP-heptose:LPS heptosyltransferase 3809865 12316773 SFxv_3998 Shigella flexneri 2002017 putative ADP-heptose:LPS heptosyltransferase YP_005729270.1 3808807 R 591020 CDS YP_005729271.1 384545207 12316774 complement(3810223..3810726) 1 NC_017328.1 IS1 orfB 3810726 12316774 SFxv_3999 Shigella flexneri 2002017 IS1 orfB YP_005729271.1 3810223 R 591020 CDS YP_005729272.1 384545208 12316775 3810840..3811019 1 NC_017328.1 putative integrase encoded by prophage CP-933K 3811019 12316775 SFxv_4000 Shigella flexneri 2002017 putative integrase encoded by prophage CP-933K YP_005729272.1 3810840 D 591020 CDS YP_005729273.1 384545209 12316776 3811054..3812331 1 NC_017328.1 3-deoxy-D-manno-octulosonic-acid transferase 3812331 waaA 12316776 waaA Shigella flexneri 2002017 3-deoxy-D-manno-octulosonic-acid transferase YP_005729273.1 3811054 D 591020 CDS YP_005729274.1 384545210 12316777 3812339..3812818 1 NC_017328.1 Phosphopantetheine adenylyltransferase 3812818 coaD 12316777 coaD Shigella flexneri 2002017 Phosphopantetheine adenylyltransferase YP_005729274.1 3812339 D 591020 CDS YP_005729275.1 384545211 12316778 complement(3812857..3813666) 1 NC_017328.1 Formamidopyrimidine-DNA glycosylase 3813666 mutM 12316778 mutM Shigella flexneri 2002017 Formamidopyrimidine-DNA glycosylase YP_005729275.1 3812857 R 591020 CDS YP_005729276.1 384545212 12316779 complement(3813764..3813931) 1 NC_017328.1 50S ribosomal protein L33 3813931 rpmG 12316779 rpmG Shigella flexneri 2002017 50S ribosomal protein L33 YP_005729276.1 3813764 R 591020 CDS YP_005729277.1 384545213 12316780 complement(3813952..3814188) 1 NC_017328.1 50S ribosomal protein L28 3814188 rpmB 12316780 rpmB Shigella flexneri 2002017 50S ribosomal protein L28 YP_005729277.1 3813952 R 591020 CDS YP_005729278.1 384545214 12316781 complement(3814405..3815079) 1 NC_017328.1 DNA repair protein 3815079 yicR 12316781 yicR Shigella flexneri 2002017 DNA repair protein YP_005729278.1 3814405 R 591020 CDS YP_005729279.1 384545215 12316782 3815245..3816465 1 NC_017328.1 Flavoprotein affecting synthesis of DNA and pantothenate metabolism 3816465 dfp 12316782 dfp Shigella flexneri 2002017 Flavoprotein affecting synthesis of DNA and pantothenate metabolism YP_005729279.1 3815245 D 591020 CDS YP_005729280.1 384545216 12316783 3816443..3816901 1 NC_017328.1 deoxyuridine 5'-triphosphate nucleotidohydrolase 3816901 dut 12316783 dut Shigella flexneri 2002017 deoxyuridine 5'-triphosphate nucleotidohydrolase YP_005729280.1 3816443 D 591020 CDS YP_005729281.1 384545217 12316784 3817008..3817604 1 NC_017328.1 putative transcriptional regulator 3817604 slmA 12316784 slmA Shigella flexneri 2002017 putative transcriptional regulator YP_005729281.1 3817008 D 591020 CDS YP_005729282.1 384545218 12316785 complement(3817641..3818282) 1 NC_017328.1 orotate phosphoribosyltransferase 3818282 pyrE 12316785 pyrE Shigella flexneri 2002017 orotate phosphoribosyltransferase YP_005729282.1 3817641 R 591020 CDS YP_005729283.1 384545219 12316786 complement(3818348..3819064) 1 NC_017328.1 Ribonuclease PH 3819064 rph 12316786 rph Shigella flexneri 2002017 Ribonuclease PH YP_005729283.1 3818348 R 591020 CDS YP_005729284.1 384545220 12316787 3819191..3820054 1 NC_017328.1 putative stress-induced protein 3820054 yicC 12316787 yicC Shigella flexneri 2002017 putative stress-induced protein YP_005729284.1 3819191 D 591020 CDS YP_005729285.1 384545221 12316788 3820263..3821099 1 NC_017328.1 DNA-damage-inducible protein 3821099 dinD 12316788 dinD Shigella flexneri 2002017 DNA-damage-inducible protein YP_005729285.1 3820263 D 591020 CDS YP_005729286.1 384545222 12316789 3821336..3822007 1 NC_017328.1 inner membrane protein yicG 3822007 yicG 12316789 yicG Shigella flexneri 2002017 inner membrane protein yicG YP_005729286.1 3821336 D 591020 CDS YP_005729287.1 384545223 12316790 complement(3822004..3823692) 1 NC_017328.1 DNA ligase B 3823692 ligB 12316790 ligB Shigella flexneri 2002017 DNA ligase B YP_005729287.1 3822004 R 591020 CDS YP_005729288.1 384545224 12316791 3823887..3824567 1 NC_017328.1 guanylate kinase 3824567 gmk 12316791 gmk Shigella flexneri 2002017 guanylate kinase YP_005729288.1 3823887 D 591020 CDS YP_005729289.1 384545225 12316792 3824622..3824897 1 NC_017328.1 putative DNA-directed RNA polymerase, subunit K/omega 3824897 rpoZ 12316792 rpoZ Shigella flexneri 2002017 putative DNA-directed RNA polymerase, subunit K/omega YP_005729289.1 3824622 D 591020 CDS YP_005729290.1 384545226 12316793 3824916..3827024 1 NC_017328.1 Guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase 3827024 spoT 12316793 spoT Shigella flexneri 2002017 Guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase YP_005729290.1 3824916 D 591020 CDS YP_005729291.1 384545227 12316794 3827031..3827720 1 NC_017328.1 tRNA guanosine-2'-O-methyltransferase 3827720 trmH 12316794 trmH Shigella flexneri 2002017 tRNA guanosine-2'-O-methyltransferase YP_005729291.1 3827031 D 591020 CDS YP_005729292.1 384545228 12316795 3827726..3829807 1 NC_017328.1 ATP-dependent DNA helicase recG 3829807 recG 12316795 recG Shigella flexneri 2002017 ATP-dependent DNA helicase recG YP_005729292.1 3827726 D 591020 CDS YP_005729293.1 384545229 12316796 complement(3829841..3831046) 1 NC_017328.1 glutamate permease 3831046 gltS 12316796 gltS Shigella flexneri 2002017 glutamate permease YP_005729293.1 3829841 R 591020 CDS YP_005729294.1 384545230 12316797 3831326..3832717 1 NC_017328.1 putative Xanthine/uracil permease 3832717 yicE 12316797 yicE Shigella flexneri 2002017 putative Xanthine/uracil permease YP_005729294.1 3831326 D 591020 CDS YP_005729295.1 384545231 12316798 3832838..3834547 1 NC_017328.1 hypothetical protein 3834547 12316798 SFxv_4023 Shigella flexneri 2002017 hypothetical protein YP_005729295.1 3832838 D 591020 CDS YP_005729296.1 384545232 12316799 complement(3834600..3836918) 1 NC_017328.1 alpha-xylosidase 3836918 yicI 12316799 yicI Shigella flexneri 2002017 alpha-xylosidase YP_005729296.1 3834600 R 591020 CDS YP_005729297.1 384545233 12316802 3838970..3840181 1 NC_017328.1 Sai integrase 3840181 12316802 SFxv_4026 Shigella flexneri 2002017 Sai integrase YP_005729297.1 3838970 D 591020 CDS YP_005729298.1 384545234 12316803 3840593..3841636 1 NC_017328.1 ShiA-like protein 3841636 12316803 SFxv_4027 Shigella flexneri 2002017 ShiA-like protein YP_005729298.1 3840593 D 591020 CDS YP_005729299.1 384545235 12316804 3842151..3842612 1 NC_017328.1 hypothetical protein 3842612 12316804 SFxv_4028 Shigella flexneri 2002017 hypothetical protein YP_005729299.1 3842151 D 591020 CDS YP_005729300.1 384545236 12316805 complement(3842609..3843316) 1 NC_017328.1 TnpA protein 3843316 12316805 SFxv_4029 Shigella flexneri 2002017 TnpA protein YP_005729300.1 3842609 R 591020 CDS YP_005729301.1 384545237 12316806 complement(3843461..3843760) 1 NC_017328.1 putative transposase 3843760 12316806 SFxv_4030 Shigella flexneri 2002017 putative transposase YP_005729301.1 3843461 R 591020 CDS YP_005729302.1 384545238 12316807 3843945..3844463 1 NC_017328.1 ShiC 3844463 12316807 SFxv_4031 Shigella flexneri 2002017 ShiC YP_005729302.1 3843945 D 591020 CDS YP_005729303.1 384545239 12316809 complement(3845428..3845754) 1 NC_017328.1 IS629 orfA 3845754 12316809 SFxv_4034 Shigella flexneri 2002017 IS629 orfA YP_005729303.1 3845428 R 591020 CDS YP_005729304.1 384545240 12316810 complement(3846424..3846696) 1 NC_017328.1 hypothetical protein 3846696 12316810 SFxv_4035 Shigella flexneri 2002017 hypothetical protein YP_005729304.1 3846424 R 591020 CDS YP_005729305.1 384545241 12316811 complement(3846757..3847662) 1 NC_017328.1 IS2 ORF2 3847662 12316811 SFxv_4038 Shigella flexneri 2002017 IS2 ORF2 YP_005729305.1 3846757 R 591020 CDS YP_005729306.1 384545242 12316812 3847186..3847617 1 NC_017328.1 putative IS2 ORF 3847617 12316812 SFxv_4036 Shigella flexneri 2002017 putative IS2 ORF YP_005729306.1 3847186 D 591020 CDS YP_005729307.1 384545243 12316813 complement(3847620..3847985) 1 NC_017328.1 IS2 ORF1 3847985 12316813 SFxv_4039 Shigella flexneri 2002017 IS2 ORF1 YP_005729307.1 3847620 R 591020 CDS YP_005729308.1 384545244 12316814 3848352..3848546 1 NC_017328.1 hypothetical protein 3848546 12316814 SFxv_4040 Shigella flexneri 2002017 hypothetical protein YP_005729308.1 3848352 D 591020 CDS YP_005729309.1 384545245 12316815 3849304..3849702 1 NC_017328.1 ShiD 3849702 12316815 SFxv_4043 Shigella flexneri 2002017 ShiD YP_005729309.1 3849304 D 591020 CDS YP_005729310.1 384545246 12316816 complement(3850223..3850726) 1 NC_017328.1 IS1 orfB 3850726 12316816 SFxv_4044 Shigella flexneri 2002017 IS1 orfB YP_005729310.1 3850223 R 591020 CDS YP_005729311.1 384545247 12316817 3850819..3851772 1 NC_017328.1 IS600 ORF2 3851772 12316817 SFxv_4045 Shigella flexneri 2002017 IS600 ORF2 YP_005729311.1 3850819 D 591020 CDS YP_005729312.1 384545248 12316818 complement(3851722..3852915) 1 NC_017328.1 ShiF 3852915 12316818 SFxv_4047 Shigella flexneri 2002017 ShiF YP_005729312.1 3851722 R 591020 CDS YP_005729313.1 384545249 12316819 3852985..3854775 1 NC_017328.1 putative Siderophore synthetase component 3854775 12316819 SFxv_4048 Shigella flexneri 2002017 putative Siderophore synthetase component YP_005729313.1 3852985 D 591020 CDS YP_005729314.1 384545250 12316820 3854776..3855681 1 NC_017328.1 IucB 3855681 12316820 SFxv_4049 Shigella flexneri 2002017 IucB YP_005729314.1 3854776 D 591020 CDS YP_005729315.1 384545251 12316821 3855722..3857464 1 NC_017328.1 Siderophore biosynthesis protein 3857464 12316821 SFxv_4050 Shigella flexneri 2002017 Siderophore biosynthesis protein YP_005729315.1 3855722 D 591020 CDS YP_005729316.1 384545252 12316822 3857461..3858798 1 NC_017328.1 Lysine:N6-hydroxylase 3858798 12316822 SFxv_4051 Shigella flexneri 2002017 Lysine:N6-hydroxylase YP_005729316.1 3857461 D 591020 CDS YP_005729317.1 384545253 12316823 3858801..3860999 1 NC_017328.1 putative ferric siderophore receptor 3860999 12316823 SFxv_4052 Shigella flexneri 2002017 putative ferric siderophore receptor YP_005729317.1 3858801 D 591020 CDS YP_005729318.1 384545254 12316824 complement(3861550..3861678) 1 NC_017328.1 hypothetical protein 3861678 12316824 SFxv_4053 Shigella flexneri 2002017 hypothetical protein YP_005729318.1 3861550 R 591020 CDS YP_005729319.1 384545255 12316825 3861920..3862678 1 NC_017328.1 serine protease 3862678 12316825 SFxv_4054 Shigella flexneri 2002017 serine protease YP_005729319.1 3861920 D 591020 CDS YP_005729320.1 384545256 12316826 complement(3862649..3863554) 1 NC_017328.1 IS2 ORF2 3863554 12316826 SFxv_4057 Shigella flexneri 2002017 IS2 ORF2 YP_005729320.1 3862649 R 591020 CDS YP_005729321.1 384545257 12316827 3863078..3863509 1 NC_017328.1 putative IS2 ORF 3863509 12316827 SFxv_4055 Shigella flexneri 2002017 putative IS2 ORF YP_005729321.1 3863078 D 591020 CDS YP_005729322.1 384545258 12316828 complement(3863512..3863877) 1 NC_017328.1 IS2 ORF1 3863877 12316828 SFxv_4058 Shigella flexneri 2002017 IS2 ORF1 YP_005729322.1 3863512 R 591020 CDS YP_005729323.1 384545259 12316829 3864023..3866545 1 NC_017328.1 putative long polar fimbriae 3866545 12316829 SFxv_4059 Shigella flexneri 2002017 putative long polar fimbriae YP_005729323.1 3864023 D 591020 CDS YP_005729324.1 384545260 12316830 complement(3866703..3867206) 1 NC_017328.1 IS1 ORF2 3867206 12316830 SFxv_4060 Shigella flexneri 2002017 IS1 ORF2 YP_005729324.1 3866703 R 591020 CDS YP_005729325.1 384545261 12316831 3867711..3868406 1 NC_017328.1 putative fimbrial protein 3868406 12316831 SFxv_4061 Shigella flexneri 2002017 putative fimbrial protein YP_005729325.1 3867711 D 591020 CDS YP_005729326.1 384545262 12316832 3868654..3869694 1 NC_017328.1 Phosphate-binding periplasmic protein 3869694 pstS 12316832 pstS Shigella flexneri 2002017 Phosphate-binding periplasmic protein YP_005729326.1 3868654 D 591020 CDS YP_005729327.1 384545263 12316833 3869781..3870740 1 NC_017328.1 phosphate transport system permease PstC 3870740 pstC 12316833 pstC Shigella flexneri 2002017 phosphate transport system permease PstC YP_005729327.1 3869781 D 591020 CDS YP_005729328.1 384545264 12316834 3870740..3871630 1 NC_017328.1 High-affinity phosphate-specific transport protein 3871630 pstA 12316834 pstA Shigella flexneri 2002017 High-affinity phosphate-specific transport protein YP_005729328.1 3870740 D 591020 CDS YP_005729329.1 384545265 12316835 3871722..3872495 1 NC_017328.1 phosphate import ATP-binding protein pstB 3872495 pstB 12316835 pstB Shigella flexneri 2002017 phosphate import ATP-binding protein pstB YP_005729329.1 3871722 D 591020 CDS YP_005729330.1 384545266 12316836 3872510..3873235 1 NC_017328.1 Negative regulator for pho regulon 3873235 phoU 12316836 phoU Shigella flexneri 2002017 Negative regulator for pho regulon YP_005729330.1 3872510 D 591020 CDS YP_005729331.1 384545267 12316837 3873522..3874343 1 NC_017328.1 Positive regulation of bgl operon 3874343 bglG 12316837 bglG Shigella flexneri 2002017 Positive regulation of bgl operon YP_005729331.1 3873522 D 591020 CDS YP_005729332.1 384545268 12316838 3874477..3876354 1 NC_017328.1 putative Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 3876354 bglF 12316838 bglF Shigella flexneri 2002017 putative Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific YP_005729332.1 3874477 D 591020 CDS YP_005729333.1 384545269 12316839 3876373..3877422 1 NC_017328.1 Phospho-beta-glucosidase B cryptic 3877422 bglB 12316839 bglB Shigella flexneri 2002017 Phospho-beta-glucosidase B cryptic YP_005729333.1 3876373 D 591020 CDS YP_005729334.1 384545270 12316840 3877650..3878153 1 NC_017328.1 IS1 ORF2 3878153 12316840 SFxv_4070 Shigella flexneri 2002017 IS1 ORF2 YP_005729334.1 3877650 D 591020 CDS YP_005729335.1 384545271 12316841 complement(3878164..3878307) 1 NC_017328.1 putative phosphatase 3878307 yieH 12316841 yieH Shigella flexneri 2002017 putative phosphatase YP_005729335.1 3878164 R 591020 CDS YP_005729336.1 384545272 12316842 3878472..3879809 1 NC_017328.1 putative membrane / transport protein 3879809 yieG 12316842 yieG Shigella flexneri 2002017 putative membrane / transport protein YP_005729336.1 3878472 D 591020 CDS YP_005729337.1 384545273 12316924 complement(3879863..3880429) 1 NC_017328.1 putative flavoprotein 3880429 yieF 12316924 yieF Shigella flexneri 2002017 putative flavoprotein YP_005729337.1 3879863 R 591020 CDS YP_005729338.1 384545274 12316925 complement(3880451..3881212) 1 NC_017328.1 hypothetical protein 3881212 12316925 SFxv_4075 Shigella flexneri 2002017 hypothetical protein YP_005729338.1 3880451 R 591020 CDS YP_005729339.1 384545275 12316927 complement(3883558..3884733) 1 NC_017328.1 Multidrug resistance protein mdtL 3884733 mdtL 12316927 mdtL Shigella flexneri 2002017 Multidrug resistance protein mdtL YP_005729339.1 3883558 R 591020 CDS YP_005729340.1 384545276 12316928 complement(3884865..3886112) 1 NC_017328.1 Low-affinity tryptophan permease 3886112 tnaB 12316928 tnaB Shigella flexneri 2002017 Low-affinity tryptophan permease YP_005729340.1 3884865 R 591020 CDS YP_005729341.1 384545277 12316929 complement(3886203..3887618) 1 NC_017328.1 tryptophanase 3887618 tnaA 12316929 tnaA Shigella flexneri 2002017 tryptophanase YP_005729341.1 3886203 R 591020 CDS YP_005729342.1 384545278 12316930 complement(3887942..3888139) 1 NC_017328.1 putative integrase encoded by prophage CP-933K 3888139 12316930 SFxv_4083 Shigella flexneri 2002017 putative integrase encoded by prophage CP-933K YP_005729342.1 3887942 R 591020 CDS YP_005729343.1 384545279 12316931 3888214..3888717 1 NC_017328.1 IS1 ORF2 3888717 12316931 SFxv_4084 Shigella flexneri 2002017 IS1 ORF2 YP_005729343.1 3888214 D 591020 CDS YP_005729344.1 384545280 12316932 complement(3888931..3890295) 1 NC_017328.1 tRNA modification GTPase trmE 3890295 mnmE 12316932 mnmE Shigella flexneri 2002017 tRNA modification GTPase trmE YP_005729344.1 3888931 R 591020 CDS YP_005729345.1 384545281 12316933 complement(3890401..3892047) 1 NC_017328.1 Inner membrane protein oxaA 3892047 yidC 12316933 yidC Shigella flexneri 2002017 Inner membrane protein oxaA YP_005729345.1 3890401 R 591020 CDS YP_005729346.1 384545282 12316934 complement(3892050..3892307) 1 NC_017328.1 protein yidD 3892307 yidD 12316934 yidD Shigella flexneri 2002017 protein yidD YP_005729346.1 3892050 R 591020 CDS YP_005729347.1 384545283 12316935 complement(3892271..3892630) 1 NC_017328.1 RNase P, protein component (Protein C5), processes tRNA, 45S RNA 3892630 rnpA 12316935 rnpA Shigella flexneri 2002017 RNase P, protein component (Protein C5), processes tRNA, 45S RNA YP_005729347.1 3892271 R 591020 CDS YP_005729348.1 384545284 12316936 3893394..3894797 1 NC_017328.1 chromosomal replication initiator protein dnaA 3894797 dnaA 12316936 dnaA Shigella flexneri 2002017 chromosomal replication initiator protein dnaA YP_005729348.1 3893394 D 591020 CDS YP_005729349.1 384545285 12316937 3894802..3895902 1 NC_017328.1 DNA polymerase III subunit beta 3895902 dnaN 12316937 dnaN Shigella flexneri 2002017 DNA polymerase III subunit beta YP_005729349.1 3894802 D 591020 CDS YP_005729350.1 384545286 12316938 3895902..3896975 1 NC_017328.1 DNA replication and repair protein RecF 3896975 recF 12316938 recF Shigella flexneri 2002017 DNA replication and repair protein RecF YP_005729350.1 3895902 D 591020 CDS YP_005729351.1 384545287 12316939 3897004..3899418 1 NC_017328.1 DNA gyrase subunit B 3899418 gyrB 12316939 gyrB Shigella flexneri 2002017 DNA gyrase subunit B YP_005729351.1 3897004 D 591020 CDS YP_005729352.1 384545288 12316940 3899649..3900056 1 NC_017328.1 hypothetical protein 3900056 12316940 SFxv_4094 Shigella flexneri 2002017 hypothetical protein YP_005729352.1 3899649 D 591020 CDS YP_005729353.1 384545289 12316941 3900170..3900982 1 NC_017328.1 Phosphatase yidA 3900982 yidA 12316941 yidA Shigella flexneri 2002017 Phosphatase yidA YP_005729353.1 3900170 D 591020 CDS YP_005729354.1 384545290 12316942 complement(3901028..3901789) 1 NC_017328.1 putative replicase 3901789 yidX 12316942 yidX Shigella flexneri 2002017 putative replicase YP_005729354.1 3901028 R 591020 CDS YP_005729355.1 384545291 12316943 3901962..3902651 1 NC_017328.1 Galactonate operon transcriptional repressor 3902651 dgoR 12316943 dgoR Shigella flexneri 2002017 Galactonate operon transcriptional repressor YP_005729355.1 3901962 D 591020 CDS YP_005729356.1 384545292 12316944 3902648..3903526 1 NC_017328.1 2-oxo-3-deoxygalactonate kinase 3903526 dgoK 12316944 dgoK Shigella flexneri 2002017 2-oxo-3-deoxygalactonate kinase YP_005729356.1 3902648 D 591020 CDS YP_005729357.1 384545293 12316946 3905347..3906684 1 NC_017328.1 D-galactonate transport protein 3906684 dgoT 12316946 dgoT Shigella flexneri 2002017 D-galactonate transport protein YP_005729357.1 3905347 D 591020 CDS YP_005729358.1 384545294 12316947 complement(3906645..3907745) 1 NC_017328.1 putative oxidoreductase 3907745 cbrA 12316947 cbrA Shigella flexneri 2002017 putative oxidoreductase YP_005729358.1 3906645 R 591020 CDS YP_005729359.1 384545295 12316948 3907810..3909078 1 NC_017328.1 putative Dipeptidyl aminopeptidases/acylaminoacyl-peptidase 3909078 yidR 12316948 yidR Shigella flexneri 2002017 putative Dipeptidyl aminopeptidases/acylaminoacyl-peptidase YP_005729359.1 3907810 D 591020 CDS YP_005729360.1 384545296 12316949 complement(3909080..3909487) 1 NC_017328.1 hypothetical protein 3909487 12316949 SFxv_4104 Shigella flexneri 2002017 hypothetical protein YP_005729360.1 3909080 R 591020 CDS YP_005729361.1 384545297 12316950 3909717..3910130 1 NC_017328.1 Small heat shock protein ibpA 3910130 ibpA 12316950 ibpA Shigella flexneri 2002017 Small heat shock protein ibpA YP_005729361.1 3909717 D 591020 CDS YP_005729362.1 384545298 12316951 3910242..3910670 1 NC_017328.1 Small heat shock protein ibpB 3910670 ibpB 12316951 ibpB Shigella flexneri 2002017 Small heat shock protein ibpB YP_005729362.1 3910242 D 591020 CDS YP_005729363.1 384545299 12316952 complement(3910675..3910824) 1 NC_017328.1 hypothetical protein 3910824 12316952 SFxv_4107 Shigella flexneri 2002017 hypothetical protein YP_005729363.1 3910675 R 591020 CDS YP_005729364.1 384545300 12316953 3910866..3912527 1 NC_017328.1 putative transport protein yidE 3912527 yidE 12316953 yidE Shigella flexneri 2002017 putative transport protein yidE YP_005729364.1 3910866 D 591020 CDS YP_005729365.1 384545301 12316954 complement(3912566..3913240) 1 NC_017328.1 putative transcriptional regulator 3913240 yidP 12316954 yidP Shigella flexneri 2002017 putative transcriptional regulator YP_005729365.1 3912566 R 591020 CDS YP_005729366.1 384545302 12316955 3913328..3915151 1 NC_017328.1 PTS system arbutin-like IIC component 3915151 12316955 SFxv_4110 Shigella flexneri 2002017 PTS system arbutin-like IIC component YP_005729366.1 3913328 D 591020 CDS YP_005729367.1 384545303 12316957 complement(3915962..3916885) 1 NC_017328.1 putative ARAC-type regulatory protein 3916885 yidL 12316957 yidL Shigella flexneri 2002017 putative ARAC-type regulatory protein YP_005729367.1 3915962 R 591020 CDS YP_005729368.1 384545304 12316958 3917022..3918737 1 NC_017328.1 putative cotransporter 3918737 yidK 12316958 yidK Shigella flexneri 2002017 putative cotransporter YP_005729368.1 3917022 D 591020 CDS YP_005729369.1 384545305 12316960 complement(3920261..3920674) 1 NC_017328.1 hypothetical protein 3920674 12316960 SFxv_4115 Shigella flexneri 2002017 hypothetical protein YP_005729369.1 3920261 R 591020 CDS YP_005729370.1 384545306 12316961 3921120..3921482 1 NC_017328.1 Inner membrane protein yidG 3921482 yidG 12316961 yidG Shigella flexneri 2002017 Inner membrane protein yidG YP_005729370.1 3921120 D 591020 CDS YP_005729371.1 384545307 12316962 3921479..3921976 1 NC_017328.1 putative transcriptional regulator 3921976 yidF 12316962 yidF Shigella flexneri 2002017 putative transcriptional regulator YP_005729371.1 3921479 D 591020 CDS YP_005729372.1 384545308 12316963 complement(3921984..3923174) 1 NC_017328.1 Multidrug resistance protein D 3923174 emrD 12316963 emrD Shigella flexneri 2002017 Multidrug resistance protein D YP_005729372.1 3921984 R 591020 CDS YP_005729373.1 384545309 12316964 3923427..3923573 1 NC_017328.1 hypothetical protein 3923573 12316964 SFxv_4120 Shigella flexneri 2002017 hypothetical protein YP_005729373.1 3923427 D 591020 CDS YP_005729374.1 384545310 12316965 complement(3923534..3923647) 1 NC_017328.1 LexA-regulated protein tisA 3923647 tisA 12316965 tisA Shigella flexneri 2002017 LexA-regulated protein tisA YP_005729374.1 3923534 R 591020 CDS YP_005729375.1 384545311 12316966 3924306..3925994 1 NC_017328.1 Acetolactate synthase 3925994 ilvB 12316966 ilvB Shigella flexneri 2002017 Acetolactate synthase YP_005729375.1 3924306 D 591020 CDS YP_005729376.1 384545312 12316967 3925998..3926288 1 NC_017328.1 Acetolactate synthase I, valine sensitive, small subunit 3926288 ilvN 12316967 ilvN Shigella flexneri 2002017 Acetolactate synthase I, valine sensitive, small subunit YP_005729376.1 3925998 D 591020 CDS YP_005729377.1 384545313 12316968 3926363..3926953 1 NC_017328.1 transcriptional regulatory protein uhpA 3926953 uhpA 12316968 uhpA Shigella flexneri 2002017 transcriptional regulatory protein uhpA YP_005729377.1 3926363 D 591020 CDS YP_005729378.1 384545314 12316969 3926950..3928455 1 NC_017328.1 Sensor histidine protein kinase, phosphorylates UhpA 3928455 uhpB 12316969 uhpB Shigella flexneri 2002017 Sensor histidine protein kinase, phosphorylates UhpA YP_005729378.1 3926950 D 591020 CDS YP_005729379.1 384545315 12316970 3928462..3929784 1 NC_017328.1 Regulator of uhpT 3929784 uhpC 12316970 uhpC Shigella flexneri 2002017 Regulator of uhpT YP_005729379.1 3928462 D 591020 CDS YP_005729380.1 384545316 12316971 3929922..3931313 1 NC_017328.1 Hexose phosphate transport protein 3931313 uhpT 12316971 uhpT Shigella flexneri 2002017 Hexose phosphate transport protein YP_005729380.1 3929922 D 591020 CDS YP_005729381.1 384545317 12316972 complement(3931359..3933125) 1 NC_017328.1 adenine deaminase 3933125 ade 12316972 ade Shigella flexneri 2002017 adenine deaminase YP_005729381.1 3931359 R 591020 CDS YP_005729382.1 384545318 12316973 3933222..3934634 1 NC_017328.1 Inorganic anion transporter, sulfate permease (SulP) family 3934634 yicO 12316973 yicO Shigella flexneri 2002017 Inorganic anion transporter, sulfate permease (SulP) family YP_005729382.1 3933222 D 591020 CDS YP_005729383.1 384545319 12316974 3934660..3935139 1 NC_017328.1 hypothetical protein 3935139 12316974 SFxv_4130 Shigella flexneri 2002017 hypothetical protein YP_005729383.1 3934660 D 591020 CDS YP_005729384.1 384545320 12316975 3935185..3936540 1 NC_017328.1 putative Arabinose efflux permease 3936540 nepI 12316975 nepI Shigella flexneri 2002017 putative Arabinose efflux permease YP_005729384.1 3935185 D 591020 CDS YP_005729385.1 384545321 12316976 complement(3936581..3936874) 1 NC_017328.1 putative transport protein 3936874 yicS 12316976 yicS Shigella flexneri 2002017 putative transport protein YP_005729385.1 3936581 R 591020 CDS YP_005729386.1 384545322 12316977 3937467..3938285 1 NC_017328.1 IS600 orfB 3938285 12316977 SFxv_4133 Shigella flexneri 2002017 IS600 orfB YP_005729386.1 3937467 D 591020 CDS YP_005729387.1 384545323 12316978 complement(3938326..3939282) 1 NC_017328.1 Serine protease sat precursor 3939282 12316978 SFxv_4134 Shigella flexneri 2002017 Serine protease sat precursor YP_005729387.1 3938326 R 591020 CDS YP_005729388.1 384545324 12316979 complement(3939370..3940359) 1 NC_017328.1 Serine protease sat precursor 3940359 12316979 SFxv_4135 Shigella flexneri 2002017 Serine protease sat precursor YP_005729388.1 3939370 R 591020 CDS YP_005729389.1 384545325 12316980 3940416..3940826 1 NC_017328.1 IS2 orfA 3940826 12316980 SFxv_4136 Shigella flexneri 2002017 IS2 orfA YP_005729389.1 3940416 D 591020 CDS YP_005729390.1 384545326 12316983 complement(3942457..3943029) 1 NC_017328.1 putative major fimbrial subunit 3943029 12316983 SFxv_4140 Shigella flexneri 2002017 putative major fimbrial subunit YP_005729390.1 3942457 R 591020 CDS YP_005729391.1 384545327 12316984 complement(3943321..3944649) 1 NC_017328.1 IS4 ORF 3944649 12316984 SFxv_4141 Shigella flexneri 2002017 IS4 ORF YP_005729391.1 3943321 R 591020 CDS YP_005729392.1 384545328 12316986 3946993..3947466 1 NC_017328.1 trimethoprim resistance protein,type I dihydrofolate reductase 3947466 12316986 SFxv_4142a Shigella flexneri 2002017 trimethoprim resistance protein,type I dihydrofolate reductase YP_005729392.1 3946993 D 591020 CDS YP_005729393.1 384545329 12316987 3947561..3948085 1 NC_017328.1 streptothricin acetyltransferase 3948085 12316987 SFxv_4142b Shigella flexneri 2002017 streptothricin acetyltransferase YP_005729393.1 3947561 D 591020 CDS YP_005729394.1 384545330 12316988 3948143..3948931 1 NC_017328.1 Streptomycin 3''-adenylyltransferase 3948931 12316988 SFxv_4143 Shigella flexneri 2002017 Streptomycin 3''-adenylyltransferase YP_005729394.1 3948143 D 591020 CDS YP_005729395.1 384545331 12316989 3949007..3949504 1 NC_017328.1 hypothetical protein 3949504 12316989 SFxv_4143a Shigella flexneri 2002017 hypothetical protein YP_005729395.1 3949007 D 591020 CDS YP_005729396.1 384545332 12316990 3949565..3949936 1 NC_017328.1 hypothetical protein 3949936 12316990 SFxv_4143b Shigella flexneri 2002017 hypothetical protein YP_005729396.1 3949565 D 591020 CDS YP_005729397.1 384545333 12316991 3949969..3950292 1 NC_017328.1 hypothetical protein 3950292 12316991 SFxv_4143c Shigella flexneri 2002017 hypothetical protein YP_005729397.1 3949969 D 591020 CDS YP_005729398.1 384545334 12316992 3950346..3950723 1 NC_017328.1 hypothetical protein 3950723 12316992 SFxv_4143d Shigella flexneri 2002017 hypothetical protein YP_005729398.1 3950346 D 591020 CDS YP_005729399.1 384545335 12316993 complement(3950954..3952570) 1 NC_017328.1 Transposon Tn7 transposition protein tnsE 3952570 12316993 SFxv_4146 Shigella flexneri 2002017 Transposon Tn7 transposition protein tnsE YP_005729399.1 3950954 R 591020 CDS YP_005729400.1 384545336 12316994 complement(3952571..3954097) 1 NC_017328.1 Transposon Tn7 transposition protein tnsD 3954097 12316994 SFxv_4147 Shigella flexneri 2002017 Transposon Tn7 transposition protein tnsD YP_005729400.1 3952571 R 591020 CDS YP_005729401.1 384545337 12316995 complement(3954100..3955767) 1 NC_017328.1 Transposon Tn7 transposition protein tnsC 3955767 12316995 SFxv_4148 Shigella flexneri 2002017 Transposon Tn7 transposition protein tnsC YP_005729401.1 3954100 R 591020 CDS YP_005729402.1 384545338 12316996 complement(3955764..3957872) 1 NC_017328.1 Transposon Tn7 transposition protein tnsB 3957872 12316996 SFxv_4149 Shigella flexneri 2002017 Transposon Tn7 transposition protein tnsB YP_005729402.1 3955764 R 591020 CDS YP_005729403.1 384545339 12316997 complement(3957859..3958680) 1 NC_017328.1 Transposon Tn7 transposition protein tnsA 3958680 12316997 SFxv_4150 Shigella flexneri 2002017 Transposon Tn7 transposition protein tnsA YP_005729403.1 3957859 R 591020 CDS YP_005729404.1 384545340 12316998 complement(3958843..3960672) 1 NC_017328.1 L-glutamine:D-fructose-6-phosphate aminotransferase 3960672 glmS 12316998 glmS Shigella flexneri 2002017 L-glutamine:D-fructose-6-phosphate aminotransferase YP_005729404.1 3958843 R 591020 CDS YP_005729405.1 384545341 12316999 complement(3960834..3962204) 1 NC_017328.1 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 3962204 glmU 12316999 glmU Shigella flexneri 2002017 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase YP_005729405.1 3960834 R 591020 CDS YP_005729406.1 384545342 12317000 complement(3962555..3962974) 1 NC_017328.1 ATP synthase subunit epsilon 3962974 atpC 12317000 atpC Shigella flexneri 2002017 ATP synthase subunit epsilon YP_005729406.1 3962555 R 591020 CDS YP_005729407.1 384545343 12317001 complement(3962995..3964377) 1 NC_017328.1 ATP synthase subunit beta 3964377 atpD 12317001 atpD Shigella flexneri 2002017 ATP synthase subunit beta YP_005729407.1 3962995 R 591020 CDS YP_005729408.1 384545344 12317002 complement(3964404..3965267) 1 NC_017328.1 ATP synthase subunit gamma 3965267 atpG 12317002 atpG Shigella flexneri 2002017 ATP synthase subunit gamma YP_005729408.1 3964404 R 591020 CDS YP_005729409.1 384545345 12317003 complement(3965318..3966859) 1 NC_017328.1 ATP synthase subunit alpha 3966859 atpA 12317003 atpA Shigella flexneri 2002017 ATP synthase subunit alpha YP_005729409.1 3965318 R 591020 CDS YP_005729410.1 384545346 12317004 complement(3966872..3967405) 1 NC_017328.1 ATP synthase subunit delta 3967405 atpH 12317004 atpH Shigella flexneri 2002017 ATP synthase subunit delta YP_005729410.1 3966872 R 591020 CDS YP_005729411.1 384545347 12317086 complement(3967420..3967890) 1 NC_017328.1 ATP synthase subunit B 3967890 atpF 12317086 atpF Shigella flexneri 2002017 ATP synthase subunit B YP_005729411.1 3967420 R 591020 CDS YP_005729412.1 384545348 12317087 complement(3967952..3968191) 1 NC_017328.1 ATP synthase subunit C 3968191 atpE 12317087 atpE Shigella flexneri 2002017 ATP synthase subunit C YP_005729412.1 3967952 R 591020 CDS YP_005729413.1 384545349 12317088 complement(3968238..3969053) 1 NC_017328.1 ATP synthase subunit A 3969053 atpB 12317088 atpB Shigella flexneri 2002017 ATP synthase subunit A YP_005729413.1 3968238 R 591020 CDS YP_005729414.1 384545350 12317089 complement(3969062..3969442) 1 NC_017328.1 ATP synthase protein I 3969442 atpI 12317089 atpI Shigella flexneri 2002017 ATP synthase protein I YP_005729414.1 3969062 R 591020 CDS YP_005729415.1 384545351 12317090 complement(3970059..3970682) 1 NC_017328.1 putative S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division 3970682 gidB 12317090 gidB Shigella flexneri 2002017 putative S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division YP_005729415.1 3970059 R 591020 CDS YP_005729416.1 384545352 12317091 complement(3970746..3972635) 1 NC_017328.1 tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA 3972635 mnmG 12317091 mnmG Shigella flexneri 2002017 tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA YP_005729416.1 3970746 R 591020 CDS YP_005729417.1 384545353 12317092 complement(3973014..3973457) 1 NC_017328.1 Initiation of chromosome replication 3973457 mioC 12317092 mioC Shigella flexneri 2002017 Initiation of chromosome replication YP_005729417.1 3973014 R 591020 CDS YP_005729418.1 384545354 12317093 complement(3973547..3974005) 1 NC_017328.1 Regulatory protein asnC 3974005 asnC 12317093 asnC Shigella flexneri 2002017 Regulatory protein asnC YP_005729418.1 3973547 R 591020 CDS YP_005729419.1 384545355 12317094 3974157..3975149 1 NC_017328.1 Aspartate--ammonia ligase 3975149 asnA 12317094 asnA Shigella flexneri 2002017 Aspartate--ammonia ligase YP_005729419.1 3974157 D 591020 CDS YP_005729420.1 384545356 12317095 complement(3975154..3976605) 1 NC_017328.1 hypothetical protein 3976605 12317095 SFxv_4168 Shigella flexneri 2002017 hypothetical protein YP_005729420.1 3975154 R 591020 CDS YP_005729421.1 384545357 12317096 complement(3976599..3978119) 1 NC_017328.1 ATPase ravA 3978119 ravA 12317096 ravA Shigella flexneri 2002017 ATPase ravA YP_005729421.1 3976599 R 591020 CDS YP_005729422.1 384545358 12317097 3978252..3979598 1 NC_017328.1 IS4 ORF 3979598 12317097 SFxv_4170 Shigella flexneri 2002017 IS4 ORF YP_005729422.1 3978252 D 591020 CDS YP_005729423.1 384545359 12317098 3979756..3981624 1 NC_017328.1 Low affinity potassium transport system protein kup 3981624 kup 12317098 kup Shigella flexneri 2002017 Low affinity potassium transport system protein kup YP_005729423.1 3979756 D 591020 CDS YP_005729424.1 384545360 12317099 3981779..3982210 1 NC_017328.1 D-ribose high-affinity transport system; membrane-associated protein 3982210 rbsD 12317099 rbsD Shigella flexneri 2002017 D-ribose high-affinity transport system; membrane-associated protein YP_005729424.1 3981779 D 591020 CDS YP_005729425.1 384545361 12317100 3982218..3982574 1 NC_017328.1 Ribose import ATP-binding protein rbsA 1 3982574 rbsA-1 12317100 rbsA-1 Shigella flexneri 2002017 Ribose import ATP-binding protein rbsA 1 YP_005729425.1 3982218 D 591020 CDS YP_005729426.1 384545362 12317101 complement(3982472..3982744) 1 NC_017328.1 IS600 ORF2 3982744 12317101 SFxv_4174 Shigella flexneri 2002017 IS600 ORF2 YP_005729426.1 3982472 R 591020 CDS YP_005729427.1 384545363 12317102 3982819..3983322 1 NC_017328.1 IS1 orfB 3983322 12317102 SFxv_4175 Shigella flexneri 2002017 IS1 orfB YP_005729427.1 3982819 D 591020 CDS YP_005729428.1 384545364 12317103 3983346..3984245 1 NC_017328.1 Ribose ABC transporter, ATP-binding protein 3984245 rbsA-2 12317103 rbsA-2 Shigella flexneri 2002017 Ribose ABC transporter, ATP-binding protein YP_005729428.1 3983346 D 591020 CDS YP_005729429.1 384545365 12317104 3984242..3984499 1 NC_017328.1 Ribose import ATP-binding protein rbsA 3984499 rbsA-3 12317104 rbsA-3 Shigella flexneri 2002017 Ribose import ATP-binding protein rbsA YP_005729429.1 3984242 D 591020 CDS YP_005729430.1 384545366 12317105 3984504..3985469 1 NC_017328.1 D-ribose high-affinity transport protein 3985469 rbsC 12317105 rbsC Shigella flexneri 2002017 D-ribose high-affinity transport protein YP_005729430.1 3984504 D 591020 CDS YP_005729431.1 384545367 12317107 3986495..3987439 1 NC_017328.1 putative Sugar kinase, ribokinase family 3987439 12317107 SFxv_4180 Shigella flexneri 2002017 putative Sugar kinase, ribokinase family YP_005729431.1 3986495 D 591020 CDS YP_005729432.1 384545368 12317108 3987443..3988435 1 NC_017328.1 Ribose operon repressor 3988435 rbsR 12317108 rbsR Shigella flexneri 2002017 Ribose operon repressor YP_005729432.1 3987443 D 591020 CDS YP_005729433.1 384545369 12317109 complement(3988401..3989360) 1 NC_017328.1 Drug resistance MFS transporter, drug:H+ antiporter-1 (DHA2) family 3989360 hsrA 12317109 hsrA Shigella flexneri 2002017 Drug resistance MFS transporter, drug:H+ antiporter-1 (DHA2) family YP_005729433.1 3988401 R 591020 CDS YP_005729434.1 384545370 12317110 complement(3989851..3990543) 1 NC_017328.1 putative HTH-type transcriptional regulator yieP 3990543 yieP 12317110 yieP Shigella flexneri 2002017 putative HTH-type transcriptional regulator yieP YP_005729434.1 3989851 R 591020 CDS YP_005729435.1 384545371 12317117 complement(3996350..3997189) 1 NC_017328.1 HTH-type transcriptional regulator hdfR 3997189 hdfR 12317117 hdfR Shigella flexneri 2002017 HTH-type transcriptional regulator hdfR YP_005729435.1 3996350 R 591020 CDS YP_005729436.1 384545372 12317118 3997308..3997646 1 NC_017328.1 hypothetical protein 3997646 12317118 SFxv_4187 Shigella flexneri 2002017 hypothetical protein YP_005729436.1 3997308 D 591020 CDS YP_005729437.1 384545373 12317120 3999738..4001384 1 NC_017328.1 Acetolactate synthase 4001384 12317120 SFxv_4189 Shigella flexneri 2002017 Acetolactate synthase YP_005729437.1 3999738 D 591020 CDS YP_005729438.1 384545374 12317121 4001381..4001644 1 NC_017328.1 Acetolactate synthase isozyme 2 small subunit 4001644 ilvM 12317121 ilvM Shigella flexneri 2002017 Acetolactate synthase isozyme 2 small subunit YP_005729438.1 4001381 D 591020 CDS YP_005729439.1 384545375 12317122 4001664..4002593 1 NC_017328.1 Branched-chain amino-acid aminotransferase 4002593 ilvE 12317122 ilvE Shigella flexneri 2002017 Branched-chain amino-acid aminotransferase YP_005729439.1 4001664 D 591020 CDS YP_005729440.1 384545376 12317123 4002658..4004508 1 NC_017328.1 Dihydroxy-acid dehydratase 4004508 ilvD 12317123 ilvD Shigella flexneri 2002017 Dihydroxy-acid dehydratase YP_005729440.1 4002658 D 591020 CDS YP_005729441.1 384545377 12317124 4004511..4006055 1 NC_017328.1 Threonine deaminase 4006055 ilvA 12317124 ilvA Shigella flexneri 2002017 Threonine deaminase YP_005729441.1 4004511 D 591020 CDS YP_005729442.1 384545378 12317125 complement(4006052..4007011) 1 NC_017328.1 IlvC positive regulator 4007011 ilvY 12317125 ilvY Shigella flexneri 2002017 IlvC positive regulator YP_005729442.1 4006052 R 591020 CDS YP_005729443.1 384545379 12317126 4006957..4008567 1 NC_017328.1 ketol-acid reductoisomerase 4008567 ilvC 12317126 ilvC Shigella flexneri 2002017 ketol-acid reductoisomerase YP_005729443.1 4006957 D 591020 CDS YP_005729444.1 384545380 12317127 complement(4008613..4008894) 1 NC_017328.1 Peptidyl-prolyl cis-trans isomerase C 4008894 12317127 SFxv_4196 Shigella flexneri 2002017 Peptidyl-prolyl cis-trans isomerase C YP_005729444.1 4008613 R 591020 CDS YP_005729445.1 384545381 12317128 4008966..4011002 1 NC_017328.1 ATP-dependent DNA helicase rep 4011002 rep 12317128 rep Shigella flexneri 2002017 ATP-dependent DNA helicase rep YP_005729445.1 4008966 D 591020 CDS YP_005729446.1 384545382 12317129 complement(4011049..4012533) 1 NC_017328.1 Guanosine-5-triphosphate,3-diphosphate pyrophosphatase 4012533 gpp 12317129 gpp Shigella flexneri 2002017 Guanosine-5-triphosphate,3-diphosphate pyrophosphatase YP_005729446.1 4011049 R 591020 CDS YP_005729447.1 384545383 12317130 complement(4012667..4013932) 1 NC_017328.1 putative Superfamily II DNA and RNA helicase 4013932 rhlB 12317130 rhlB Shigella flexneri 2002017 putative Superfamily II DNA and RNA helicase YP_005729447.1 4012667 R 591020 CDS YP_005729448.1 384545384 12317131 4013958..4014392 1 NC_017328.1 Thioredoxin 1 4014392 trxA 12317131 trxA Shigella flexneri 2002017 Thioredoxin 1 YP_005729448.1 4013958 D 591020 CDS YP_005729449.1 384545385 12317132 4014647..4015978 1 NC_017328.1 Transcription termination factor rho 4015978 rho 12317132 rho Shigella flexneri 2002017 Transcription termination factor rho YP_005729449.1 4014647 D 591020 CDS YP_005729450.1 384545386 12317133 4015988..4016206 1 NC_017328.1 hypothetical protein 4016206 12317133 SFxv_4203 Shigella flexneri 2002017 hypothetical protein YP_005729450.1 4015988 D 591020 CDS YP_005729451.1 384545387 12317134 4016218..4017321 1 NC_017328.1 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase 4017321 rfe 12317134 rfe Shigella flexneri 2002017 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase YP_005729451.1 4016218 D 591020 CDS YP_005729452.1 384545388 12317135 4017330..4018379 1 NC_017328.1 Lipopolysaccharide biosynthesis protein wzzE 4018379 wzzE 12317135 wzzE Shigella flexneri 2002017 Lipopolysaccharide biosynthesis protein wzzE YP_005729452.1 4017330 D 591020 CDS YP_005729453.1 384545389 12317136 4018393..4019565 1 NC_017328.1 UDP-N-acetylglucosamine 2-epimerase 4019565 rffE 12317136 rffE Shigella flexneri 2002017 UDP-N-acetylglucosamine 2-epimerase YP_005729453.1 4018393 D 591020 CDS YP_005729454.1 384545390 12317137 4019562..4020824 1 NC_017328.1 UDP-N-acetyl-D-mannosamine dehydrogenase 4020824 rffD 12317137 rffD Shigella flexneri 2002017 UDP-N-acetyl-D-mannosamine dehydrogenase YP_005729454.1 4019562 D 591020 CDS YP_005729455.1 384545391 12317138 4020875..4021891 1 NC_017328.1 DTDP-glucose 4,6-dehydratase 4021891 rffG 12317138 rffG Shigella flexneri 2002017 DTDP-glucose 4,6-dehydratase YP_005729455.1 4020875 D 591020 CDS YP_005729456.1 384545392 12317139 4021910..4022791 1 NC_017328.1 Glucose-1-phosphate thymidylyltransferase 2 4022791 rffH 12317139 rffH Shigella flexneri 2002017 Glucose-1-phosphate thymidylyltransferase 2 YP_005729456.1 4021910 D 591020 CDS YP_005729457.1 384545393 12317140 4022769..4023443 1 NC_017328.1 Lipopolysaccharide biosynthesis protein RffC 4023443 rffC 12317140 rffC Shigella flexneri 2002017 Lipopolysaccharide biosynthesis protein RffC YP_005729457.1 4022769 D 591020 CDS YP_005729458.1 384545394 12317141 4023448..4024578 1 NC_017328.1 putative regulator 4024578 rffA 12317141 rffA Shigella flexneri 2002017 putative regulator YP_005729458.1 4023448 D 591020 CDS YP_005729459.1 384545395 12317142 4024580..4025830 1 NC_017328.1 putative cytochrome 4025830 wzxE 12317142 wzxE Shigella flexneri 2002017 putative cytochrome YP_005729459.1 4024580 D 591020 CDS YP_005729460.1 384545396 12317143 4025827..4026906 1 NC_017328.1 4-alpha-L-fucosyltransferase 4026906 rffT 12317143 rffT Shigella flexneri 2002017 4-alpha-L-fucosyltransferase YP_005729460.1 4025827 D 591020 CDS YP_005729461.1 384545397 12317144 4026903..4028255 1 NC_017328.1 putative ECA polymerase 4028255 wzyE 12317144 wzyE Shigella flexneri 2002017 putative ECA polymerase YP_005729461.1 4026903 D 591020 CDS YP_005729462.1 384545398 12317145 4028258..4028998 1 NC_017328.1 putative UDP-N-acetyl-D-mannosaminuronic acid transferase 4028998 rffM 12317145 rffM Shigella flexneri 2002017 putative UDP-N-acetyl-D-mannosaminuronic acid transferase YP_005729462.1 4028258 D 591020 CDS YP_005729463.1 384545399 12317146 4029305..4030573 1 NC_017328.1 putative Gamma-aminobutyrate permease-like permease 4030573 yifK 12317146 yifK Shigella flexneri 2002017 putative Gamma-aminobutyrate permease-like permease YP_005729463.1 4029305 D 591020 CDS YP_005729464.1 384545400 12317151 4031391..4032494 1 NC_017328.1 putative arylsulfatase regulator 4032494 aslB 12317151 aslB Shigella flexneri 2002017 putative arylsulfatase regulator YP_005729464.1 4031391 D 591020 CDS YP_005729465.1 384545401 12317152 complement(4032664..4033569) 1 NC_017328.1 IS2 ORF2 4033569 12317152 SFxv_4220 Shigella flexneri 2002017 IS2 ORF2 YP_005729465.1 4032664 R 591020 CDS YP_005729466.1 384545402 12317153 4033093..4033524 1 NC_017328.1 putative IS2 ORF 4033524 12317153 SFxv_4218 Shigella flexneri 2002017 putative IS2 ORF YP_005729466.1 4033093 D 591020 CDS YP_005729467.1 384545403 12317154 complement(4033527..4033937) 1 NC_017328.1 IS2 ORF1 4033937 12317154 SFxv_4221 Shigella flexneri 2002017 IS2 ORF1 YP_005729467.1 4033527 R 591020 CDS YP_005729468.1 384545404 12317155 complement(4034754..4035950) 1 NC_017328.1 A late step of protoheme IX synthesis 4035950 hemY 12317155 hemY Shigella flexneri 2002017 A late step of protoheme IX synthesis YP_005729468.1 4034754 R 591020 CDS YP_005729469.1 384545405 12317156 complement(4035953..4037164) 1 NC_017328.1 putative uroporphyrin-III C-methyltransferase 4037164 hemX 12317156 hemX Shigella flexneri 2002017 putative uroporphyrin-III C-methyltransferase YP_005729469.1 4035953 R 591020 CDS YP_005729470.1 384545406 12317157 complement(4037186..4037926) 1 NC_017328.1 Uroporphyrinogen III synthase 4037926 hemD 12317157 hemD Shigella flexneri 2002017 Uroporphyrinogen III synthase YP_005729470.1 4037186 R 591020 CDS YP_005729471.1 384545407 12317158 complement(4037923..4038885) 1 NC_017328.1 porphobilinogen deaminase 4038885 hemC 12317158 hemC Shigella flexneri 2002017 porphobilinogen deaminase YP_005729471.1 4037923 R 591020 CDS YP_005729472.1 384545408 12317159 4039251..4041797 1 NC_017328.1 adenylate cyclase 4041797 cyaA 12317159 cyaA Shigella flexneri 2002017 adenylate cyclase YP_005729472.1 4039251 D 591020 CDS YP_005729473.1 384545409 12317160 complement(4041837..4042157) 1 NC_017328.1 putative Protein implicated in iron transport, frataxin-like protein 4042157 cyaY 12317160 cyaY Shigella flexneri 2002017 putative Protein implicated in iron transport, frataxin-like protein YP_005729473.1 4041837 R 591020 CDS YP_005729474.1 384545410 12317161 4041948..4042286 1 NC_017328.1 hypothetical protein 4042286 12317161 SFxv_4227a Shigella flexneri 2002017 hypothetical protein YP_005729474.1 4041948 D 591020 CDS YP_005729475.1 384545411 12317162 complement(4042590..4042805) 1 NC_017328.1 IS600 ORF2 4042805 12317162 SFxv_4228 Shigella flexneri 2002017 IS600 ORF2 YP_005729475.1 4042590 R 591020 CDS YP_005729476.1 384545412 12317163 4042880..4043383 1 NC_017328.1 IS1 orfB 4043383 12317163 SFxv_4229 Shigella flexneri 2002017 IS1 orfB YP_005729476.1 4042880 D 591020 CDS YP_005729477.1 384545413 12317165 complement(4044619..4045800) 1 NC_017328.1 putative lipoprotein 4045800 12317165 SFxv_4232 Shigella flexneri 2002017 putative lipoprotein YP_005729477.1 4044619 R 591020 CDS YP_005729478.1 384545414 12317166 4045959..4046162 1 NC_017328.1 hypothetical protein 4046162 12317166 SFxv_4233 Shigella flexneri 2002017 hypothetical protein YP_005729478.1 4045959 D 591020 CDS YP_005729479.1 384545415 12317248 4046196..4047023 1 NC_017328.1 diaminopimelate epimerase 4047023 dapF 12317248 dapF Shigella flexneri 2002017 diaminopimelate epimerase YP_005729479.1 4046196 D 591020 CDS YP_005729480.1 384545416 12317249 4047020..4047727 1 NC_017328.1 hypothetical protein 4047727 yigA 12317249 yigA Shigella flexneri 2002017 hypothetical protein YP_005729480.1 4047020 D 591020 CDS YP_005729481.1 384545417 12317250 4047724..4048620 1 NC_017328.1 tyrosine recombinase XerC 4048620 xerC 12317250 xerC Shigella flexneri 2002017 tyrosine recombinase XerC YP_005729481.1 4047724 D 591020 CDS YP_005729482.1 384545418 12317251 4048620..4049336 1 NC_017328.1 putative hydrolase (HAD superfamily) 4049336 yigB 12317251 yigB Shigella flexneri 2002017 putative hydrolase (HAD superfamily) YP_005729482.1 4048620 D 591020 CDS YP_005729483.1 384545419 12317252 4049420..4051582 1 NC_017328.1 DNA-dependent ATPase I and helicase II 4051582 uvrD 12317252 uvrD Shigella flexneri 2002017 DNA-dependent ATPase I and helicase II YP_005729483.1 4049420 D 591020 CDS YP_005729484.1 384545420 12317253 complement(4051729..4052160) 1 NC_017328.1 hypothetical protein 4052160 yigE-1 12317253 yigE-1 Shigella flexneri 2002017 hypothetical protein YP_005729484.1 4051729 R 591020 CDS YP_005729485.1 384545421 12317254 4052236..4053582 1 NC_017328.1 IS4 ORF 4053582 12317254 SFxv_4241 Shigella flexneri 2002017 IS4 ORF YP_005729485.1 4052236 D 591020 CDS YP_005729486.1 384545422 12317255 complement(4053593..4053931) 1 NC_017328.1 hypothetical protein 4053931 yigE-2 12317255 yigE-2 Shigella flexneri 2002017 hypothetical protein YP_005729486.1 4053593 R 591020 CDS YP_005729487.1 384545423 12317256 4053944..4054057 1 NC_017328.1 hypothetical protein 4054057 12317256 SFxv_4243 Shigella flexneri 2002017 hypothetical protein YP_005729487.1 4053944 D 591020 CDS YP_005729488.1 384545424 12317257 4054301..4055251 1 NC_017328.1 Magnesium and cobalt transport protein 4055251 corA 12317257 corA Shigella flexneri 2002017 Magnesium and cobalt transport protein YP_005729488.1 4054301 D 591020 CDS YP_005729489.1 384545425 12317258 complement(4055292..4055672) 1 NC_017328.1 hypothetical protein 4055672 12317258 SFxv_4245 Shigella flexneri 2002017 hypothetical protein YP_005729489.1 4055292 R 591020 CDS YP_005729490.1 384545426 12317259 complement(4055686..4056102) 1 NC_017328.1 Inner membrane protein yigG 4056102 yigG 12317259 yigG Shigella flexneri 2002017 Inner membrane protein yigG YP_005729490.1 4055686 R 591020 CDS YP_005729491.1 384545427 12317260 complement(4056161..4057051) 1 NC_017328.1 putative permease 4057051 rarD 12317260 rarD Shigella flexneri 2002017 putative permease YP_005729491.1 4056161 R 591020 CDS YP_005729492.1 384545428 12317261 complement(4057103..4057588) 1 NC_017328.1 Thioesterase family protein 4057588 yigI 12317261 yigI Shigella flexneri 2002017 Thioesterase family protein YP_005729492.1 4057103 R 591020 CDS YP_005729493.1 384545429 12317262 4057735..4058604 1 NC_017328.1 Phospholipase A1 precursor 4058604 pldA 12317262 pldA Shigella flexneri 2002017 Phospholipase A1 precursor YP_005729493.1 4057735 D 591020 CDS YP_005729494.1 384545430 12317263 4058731..4060566 1 NC_017328.1 ATP-dependent DNA helicase 4060566 recQ 12317263 recQ Shigella flexneri 2002017 ATP-dependent DNA helicase YP_005729494.1 4058731 D 591020 CDS YP_005729495.1 384545431 12317264 4060630..4061250 1 NC_017328.1 Threonine efflux system protein RhtC 4061250 rhtC 12317264 rhtC Shigella flexneri 2002017 Threonine efflux system protein RhtC YP_005729495.1 4060630 D 591020 CDS YP_005729496.1 384545432 12317265 complement(4061312..4061932) 1 NC_017328.1 Homoserine/homoserine lactone efflux protein 4061932 rhtB 12317265 rhtB Shigella flexneri 2002017 Homoserine/homoserine lactone efflux protein YP_005729496.1 4061312 R 591020 CDS YP_005729497.1 384545433 12317266 4062043..4063065 1 NC_017328.1 Lysophospholipase L 4063065 pldB 12317266 pldB Shigella flexneri 2002017 Lysophospholipase L YP_005729497.1 4062043 D 591020 CDS YP_005729498.1 384545434 12317267 4063010..4063873 1 NC_017328.1 hydrolase 4063873 yigL 12317267 yigL Shigella flexneri 2002017 hydrolase YP_005729498.1 4063010 D 591020 CDS YP_005729499.1 384545435 12317268 4063949..4064848 1 NC_017328.1 putative membrane protein yigM 4064848 yigM 12317268 yigM Shigella flexneri 2002017 putative membrane protein yigM YP_005729499.1 4063949 D 591020 CDS YP_005729500.1 384545436 12317269 complement(4064736..4065689) 1 NC_017328.1 HTH-type transcriptional regulator metR 4065689 metR 12317269 metR Shigella flexneri 2002017 HTH-type transcriptional regulator metR YP_005729500.1 4064736 R 591020 CDS YP_005729501.1 384545437 12317270 4065925..4068186 1 NC_017328.1 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 4068186 metE 12317270 metE Shigella flexneri 2002017 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase YP_005729501.1 4065925 D 591020 CDS YP_005729502.1 384545438 12317271 complement(4068225..4069106) 1 NC_017328.1 putative dienelactone hydrolase-like enzyme 4069106 ysgA 12317271 ysgA Shigella flexneri 2002017 putative dienelactone hydrolase-like enzyme YP_005729502.1 4068225 R 591020 CDS YP_005729503.1 384545439 12317272 4069302..4070063 1 NC_017328.1 Uridine phosphorylase 4070063 udp 12317272 udp Shigella flexneri 2002017 Uridine phosphorylase YP_005729503.1 4069302 D 591020 CDS YP_005729504.1 384545440 12317273 4070204..4071631 1 NC_017328.1 DNA recombination protein rmuC 4071631 rmuC 12317273 rmuC Shigella flexneri 2002017 DNA recombination protein rmuC YP_005729504.1 4070204 D 591020 CDS YP_005729505.1 384545441 12317274 4071726..4072481 1 NC_017328.1 putative Methylase involved in ubiquinone/menaquinone biosynthesis 4072481 ubiE 12317274 ubiE Shigella flexneri 2002017 putative Methylase involved in ubiquinone/menaquinone biosynthesis YP_005729505.1 4071726 D 591020 CDS YP_005729506.1 384545442 12317275 4072495..4073100 1 NC_017328.1 hypothetical protein 4073100 yigP 12317275 yigP Shigella flexneri 2002017 hypothetical protein YP_005729506.1 4072495 D 591020 CDS YP_005729507.1 384545443 12317276 4073097..4074737 1 NC_017328.1 putative ubiquinone biosynthesis protein ubiB 4074737 ubiB 12317276 ubiB Shigella flexneri 2002017 putative ubiquinone biosynthesis protein ubiB YP_005729507.1 4073097 D 591020 CDS YP_005729508.1 384545444 12317277 4074774..4075085 1 NC_017328.1 Sec-independent twin-arginine translocase subunit TatA 4075085 tatA 12317277 tatA Shigella flexneri 2002017 Sec-independent twin-arginine translocase subunit TatA YP_005729508.1 4074774 D 591020 CDS YP_005729509.1 384545445 12317278 4075089..4075604 1 NC_017328.1 sec-independent translocase 4075604 tatB 12317278 tatB Shigella flexneri 2002017 sec-independent translocase YP_005729509.1 4075089 D 591020 CDS YP_005729510.1 384545446 12317279 4075607..4076383 1 NC_017328.1 Sec-independent protein translocase protein tatC 4076383 tatC 12317279 tatC Shigella flexneri 2002017 Sec-independent protein translocase protein tatC YP_005729510.1 4075607 D 591020 CDS YP_005729511.1 384545447 12317280 4076413..4077207 1 NC_017328.1 putative Mg-dependent DNase 4077207 tatD 12317280 tatD Shigella flexneri 2002017 putative Mg-dependent DNase YP_005729511.1 4076413 D 591020 CDS YP_005729512.1 384545448 12317281 complement(4077204..4077692) 1 NC_017328.1 transcriptional activator rfaH 4077692 rfaH 12317281 rfaH Shigella flexneri 2002017 transcriptional activator rfaH YP_005729512.1 4077204 R 591020 CDS YP_005729513.1 384545449 12317282 4077859..4079352 1 NC_017328.1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 4079352 ubiD 12317282 ubiD Shigella flexneri 2002017 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_005729513.1 4077859 D 591020 CDS YP_005729514.1 384545450 12317283 4079365..4080099 1 NC_017328.1 Ferrisiderophore reductase, flavin reductase 4080099 fre 12317283 fre Shigella flexneri 2002017 Ferrisiderophore reductase, flavin reductase YP_005729514.1 4079365 D 591020 CDS YP_005729515.1 384545451 12317284 complement(4080291..4081454) 1 NC_017328.1 3-ketoacyl-CoA thiolase 4081454 fadA 12317284 fadA Shigella flexneri 2002017 3-ketoacyl-CoA thiolase YP_005729515.1 4080291 R 591020 CDS YP_005729516.1 384545452 12317285 complement(4081464..4083653) 1 NC_017328.1 Fatty acid oxidation complex subunit alpha 4083653 fadB 12317285 fadB Shigella flexneri 2002017 Fatty acid oxidation complex subunit alpha YP_005729516.1 4081464 R 591020 CDS YP_005729517.1 384545453 12317286 4083843..4085174 1 NC_017328.1 Xaa-Pro dipeptidase 4085174 pepQ 12317286 pepQ Shigella flexneri 2002017 Xaa-Pro dipeptidase YP_005729517.1 4083843 D 591020 CDS YP_005729518.1 384545454 12317287 4085171..4085788 1 NC_017328.1 hypothetical protein 4085788 12317287 SFxv_4277 Shigella flexneri 2002017 hypothetical protein YP_005729518.1 4085171 D 591020 CDS YP_005729519.1 384545455 12317288 4085827..4087278 1 NC_017328.1 putative Trk-type K+ transport system, membrane component 4087278 trkH 12317288 trkH Shigella flexneri 2002017 putative Trk-type K+ transport system, membrane component YP_005729519.1 4085827 D 591020 CDS YP_005729520.1 384545456 12317289 4087290..4087835 1 NC_017328.1 Protoporphyrin oxidase 4087835 hemG 12317289 hemG Shigella flexneri 2002017 Protoporphyrin oxidase YP_005729520.1 4087290 D 591020 CDS YP_005729521.1 384545457 12317295 complement(4093417..4093944) 1 NC_017328.1 molybdopterin-guanine dinucleotide biosynthesis protein MobB 4093944 mobB 12317295 mobB Shigella flexneri 2002017 molybdopterin-guanine dinucleotide biosynthesis protein MobB YP_005729521.1 4093417 R 591020 CDS YP_005729522.1 384545458 12317296 complement(4093926..4094510) 1 NC_017328.1 molybdopterin-guanine dinucleotide biosynthesis protein A 4094510 mobA 12317296 mobA Shigella flexneri 2002017 molybdopterin-guanine dinucleotide biosynthesis protein A YP_005729522.1 4093926 R 591020 CDS YP_005729523.1 384545459 12317297 4094580..4094849 1 NC_017328.1 Protein yihD 4094849 yihD 12317297 yihD Shigella flexneri 2002017 Protein yihD YP_005729523.1 4094580 D 591020 CDS YP_005729524.1 384545460 12317298 4094926..4095912 1 NC_017328.1 putative homoserine kinase type II (protein kinase fold) 4095912 rdoA 12317298 rdoA Shigella flexneri 2002017 putative homoserine kinase type II (protein kinase fold) YP_005729524.1 4094926 D 591020 CDS YP_005729525.1 384545461 12317299 4095929..4096555 1 NC_017328.1 Thiol:disulfide interchange protein dsbA precursor 4096555 dsbA 12317299 dsbA Shigella flexneri 2002017 Thiol:disulfide interchange protein dsbA precursor YP_005729525.1 4095929 D 591020 CDS YP_005729526.1 384545462 12317300 4096668..4098140 1 NC_017328.1 putative GTP-binding protein 4098140 yihF 12317300 yihF Shigella flexneri 2002017 putative GTP-binding protein YP_005729526.1 4096668 D 591020 CDS YP_005729527.1 384545463 12317301 complement(4098181..4099137) 1 NC_017328.1 putative endonuclease 4099137 yihG 12317301 yihG Shigella flexneri 2002017 putative endonuclease YP_005729527.1 4098181 R 591020 CDS YP_005729528.1 384545464 12317302 complement(4099233..4099352) 1 NC_017328.1 hypothetical protein 4099352 12317302 SFxv_4289 Shigella flexneri 2002017 hypothetical protein YP_005729528.1 4099233 R 591020 CDS YP_005729529.1 384545465 12317303 4099477..4102263 1 NC_017328.1 DNA polymerase I, 3--> 5 polymerase, 5--> 3 and 3--> 5 exonuclease 4102263 polA 12317303 polA Shigella flexneri 2002017 DNA polymerase I, 3--> 5 polymerase, 5--> 3 and 3--> 5 exonuclease YP_005729529.1 4099477 D 591020 CDS YP_005729530.1 384545466 12317304 complement(4102645..4103277) 1 NC_017328.1 putative GTP-binding protein engB 4103277 yihA 12317304 yihA Shigella flexneri 2002017 putative GTP-binding protein engB YP_005729530.1 4102645 R 591020 CDS YP_005729531.1 384545467 12317305 4103796..4104368 1 NC_017328.1 hypothetical protein 4104368 yihI 12317305 yihI Shigella flexneri 2002017 hypothetical protein YP_005729531.1 4103796 D 591020 CDS YP_005729532.1 384545468 12317306 4104557..4105930 1 NC_017328.1 O2-independent coproporphyrinogen III oxidase 4105930 hemN 12317306 hemN Shigella flexneri 2002017 O2-independent coproporphyrinogen III oxidase YP_005729532.1 4104557 D 591020 CDS YP_005729533.1 384545469 12317307 complement(4106381..4107790) 1 NC_017328.1 Nitrogen metabolism transcriptional regulator, NtrC, Fis Family 4107790 glnG 12317307 glnG Shigella flexneri 2002017 Nitrogen metabolism transcriptional regulator, NtrC, Fis Family YP_005729533.1 4106381 R 591020 CDS YP_005729534.1 384545470 12317308 complement(4107802..4108851) 1 NC_017328.1 putative Signal transduction histidine kinase, nitrogen specific 4108851 glnL 12317308 glnL Shigella flexneri 2002017 putative Signal transduction histidine kinase, nitrogen specific YP_005729534.1 4107802 R 591020 CDS YP_005729535.1 384545471 12317309 complement(4109024..4110433) 1 NC_017328.1 glutamine synthetase 4110433 glnA 12317309 glnA Shigella flexneri 2002017 glutamine synthetase YP_005729535.1 4109024 R 591020 CDS YP_005729536.1 384545472 12317310 4110806..4112629 1 NC_017328.1 GTP-binding protein typA/bipA 4112629 typA 12317310 typA Shigella flexneri 2002017 GTP-binding protein typA/bipA YP_005729536.1 4110806 D 591020 CDS YP_005729537.1 384545473 12317311 4112846..4113556 1 NC_017328.1 putative HTH-type transcriptional regulator yihL 4113556 yihL 12317311 yihL Shigella flexneri 2002017 putative HTH-type transcriptional regulator yihL YP_005729537.1 4112846 D 591020 CDS YP_005729538.1 384545474 12317312 4113564..4114544 1 NC_017328.1 xylose isomerase domain-containing protein 4114544 yihM 12317312 yihM Shigella flexneri 2002017 xylose isomerase domain-containing protein YP_005729538.1 4113564 D 591020 CDS YP_005729539.1 384545475 12317313 4114646..4115704 1 NC_017328.1 Transporter, major facilitator family 4115704 yihN 12317313 yihN Shigella flexneri 2002017 Transporter, major facilitator family YP_005729539.1 4114646 D 591020 CDS YP_005729540.1 384545476 12317314 4116138..4116431 1 NC_017328.1 IS1 ORF2 4116431 12317314 SFxv_4301 Shigella flexneri 2002017 IS1 ORF2 YP_005729540.1 4116138 D 591020 CDS YP_005729541.1 384545477 12317315 complement(4116366..4116812) 1 NC_017328.1 Oligogalacturonate-specific porin protein KdgM 4116812 ompL 12317315 ompL Shigella flexneri 2002017 Oligogalacturonate-specific porin protein KdgM YP_005729541.1 4116366 R 591020 CDS YP_005729542.1 384545478 12317316 complement(4116844..4118253) 1 NC_017328.1 Sugar (Glycoside-Pentoside-Hexuronide) transporter family protein 4118253 yihO 12317316 yihO Shigella flexneri 2002017 Sugar (Glycoside-Pentoside-Hexuronide) transporter family protein YP_005729542.1 4116844 R 591020 CDS YP_005729543.1 384545479 12317317 complement(4119710..4121746) 1 NC_017328.1 Alpha-glucosidase yihQ 4121746 yihQ 12317317 yihQ Shigella flexneri 2002017 Alpha-glucosidase yihQ YP_005729543.1 4119710 R 591020 CDS YP_005729544.1 384545480 12317318 complement(4121945..4122871) 1 NC_017328.1 putative aldose-1-epimerase 4122871 yihR 12317318 yihR Shigella flexneri 2002017 putative aldose-1-epimerase YP_005729544.1 4121945 R 591020 CDS YP_005729545.1 384545481 12317319 complement(4122985..4124226) 1 NC_017328.1 putative sugar isomerase yihS 4124226 yihS 12317319 yihS Shigella flexneri 2002017 putative sugar isomerase yihS YP_005729545.1 4122985 R 591020 CDS YP_005729546.1 384545482 12317320 complement(4124243..4125121) 1 NC_017328.1 putative aldolase yihT 4125121 yihT 12317320 yihT Shigella flexneri 2002017 putative aldolase yihT YP_005729546.1 4124243 R 591020 CDS YP_005729547.1 384545483 12317321 complement(4125145..4126041) 1 NC_017328.1 3-hydroxyisobutyrate dehydrogenase 4126041 yihU 12317321 yihU Shigella flexneri 2002017 3-hydroxyisobutyrate dehydrogenase YP_005729547.1 4125145 R 591020 CDS YP_005729548.1 384545484 12317322 4126209..4127105 1 NC_017328.1 putative sugar kinase yihV 4127105 yihV 12317322 yihV Shigella flexneri 2002017 putative sugar kinase yihV YP_005729548.1 4126209 D 591020 CDS YP_005729549.1 384545485 12317323 4127139..4127924 1 NC_017328.1 putative DEOR-type transcriptional regulator 4127924 yihW 12317323 yihW Shigella flexneri 2002017 putative DEOR-type transcriptional regulator YP_005729549.1 4127139 D 591020 CDS YP_005729550.1 384545486 12317324 4128023..4128622 1 NC_017328.1 Phosphatase yihX 4128622 yihX 12317324 yihX Shigella flexneri 2002017 Phosphatase yihX YP_005729550.1 4128023 D 591020 CDS YP_005729551.1 384545487 12317325 4128616..4129488 1 NC_017328.1 tRNA-processing ribonuclease BN 4129488 yihY 12317325 yihY Shigella flexneri 2002017 tRNA-processing ribonuclease BN YP_005729551.1 4128616 D 591020 CDS YP_005729552.1 384545488 12317326 4129485..4129922 1 NC_017328.1 D-tyrosyl-tRNA(Tyr) deacylase 4129922 dtd 12317326 dtd Shigella flexneri 2002017 D-tyrosyl-tRNA(Tyr) deacylase YP_005729552.1 4129485 D 591020 CDS YP_005729553.1 384545489 12317327 4129919..4130908 1 NC_017328.1 putative acetyltransferase 4130908 yiiD 12317327 yiiD Shigella flexneri 2002017 putative acetyltransferase YP_005729553.1 4129919 D 591020 CDS YP_005729554.1 384545490 12317328 complement(4130938..4131441) 1 NC_017328.1 IS1 ORF2 4131441 12317328 SFxv_4315 Shigella flexneri 2002017 IS1 ORF2 YP_005729554.1 4130938 R 591020 CDS YP_005729555.1 384545491 12317410 4131555..4131848 1 NC_017328.1 putative alpha-mannosidase 4131848 12317410 SFxv_4316 Shigella flexneri 2002017 putative alpha-mannosidase YP_005729555.1 4131555 D 591020 CDS YP_005729556.1 384545492 12317411 complement(4131783..4132286) 1 NC_017328.1 IS1 ORF2 4132286 12317411 SFxv_4317 Shigella flexneri 2002017 IS1 ORF2 YP_005729556.1 4131783 R 591020 CDS YP_005729557.1 384545493 12317412 4132550..4133695 1 NC_017328.1 IS600 ORF2 4133695 12317412 SFxv_4318 Shigella flexneri 2002017 IS600 ORF2 YP_005729557.1 4132550 D 591020 CDS YP_005729558.1 384545494 12317413 complement(4133718..4134089) 1 NC_017328.1 hypothetical protein 4134089 12317413 SFxv_4319 Shigella flexneri 2002017 hypothetical protein YP_005729558.1 4133718 R 591020 CDS YP_005729559.1 384545495 12317414 complement(4134176..4134340) 1 NC_017328.1 hypothetical protein 4134340 12317414 SFxv_4321 Shigella flexneri 2002017 hypothetical protein YP_005729559.1 4134176 R 591020 CDS YP_005729560.1 384545496 12317415 4134230..4134592 1 NC_017328.1 ribbon-helix-helix protein, copG family 4134592 yiiE 12317415 yiiE Shigella flexneri 2002017 ribbon-helix-helix protein, copG family YP_005729560.1 4134230 D 591020 CDS YP_005729561.1 384545497 12317416 4134810..4135052 1 NC_017328.1 hypothetical protein 4135052 12317416 SFxv_4322 Shigella flexneri 2002017 hypothetical protein YP_005729561.1 4134810 D 591020 CDS YP_005729562.1 384545498 12317417 complement(4135382..4136311) 1 NC_017328.1 fdhE-like protein 4136311 fdhE 12317417 fdhE Shigella flexneri 2002017 fdhE-like protein YP_005729562.1 4135382 R 591020 CDS YP_005729563.1 384545499 12317418 complement(4136308..4136943) 1 NC_017328.1 Formate dehydrogenase, cytochrome B556 (FDO) subunit 4136943 fdoI 12317418 fdoI Shigella flexneri 2002017 Formate dehydrogenase, cytochrome B556 (FDO) subunit YP_005729563.1 4136308 R 591020 CDS YP_005729564.1 384545500 12317419 complement(4136940..4137842) 1 NC_017328.1 Formate dehydrogenase-O, iron-sulfur subunit 4137842 fdoH 12317419 fdoH Shigella flexneri 2002017 Formate dehydrogenase-O, iron-sulfur subunit YP_005729564.1 4136940 R 591020 CDS YP_005729565.1 384545501 12317421 4141099..4141932 1 NC_017328.1 formate dehydrogenase accessory protein 4141932 fdhD 12317421 fdhD Shigella flexneri 2002017 formate dehydrogenase accessory protein YP_005729565.1 4141099 D 591020 CDS YP_005729566.1 384545502 12317422 complement(4142004..4142507) 1 NC_017328.1 IS1 ORF2 4142507 12317422 SFxv_4329 Shigella flexneri 2002017 IS1 ORF2 YP_005729566.1 4142004 R 591020 CDS YP_005729567.1 384545503 12317423 4142621..4142878 1 NC_017328.1 putative alpha-mannosidase 4142878 12317423 SFxv_4330 Shigella flexneri 2002017 putative alpha-mannosidase YP_005729567.1 4142621 D 591020 CDS YP_005729568.1 384545504 12317424 complement(4142735..4143385) 1 NC_017328.1 putative frv operon regulatory protein 4143385 frvR 12317424 frvR Shigella flexneri 2002017 putative frv operon regulatory protein YP_005729568.1 4142735 R 591020 CDS YP_005729569.1 384545505 12317425 complement(4143385..4144455) 1 NC_017328.1 Frv operon protein 4144455 frvX 12317425 frvX Shigella flexneri 2002017 Frv operon protein YP_005729569.1 4143385 R 591020 CDS YP_005729570.1 384545506 12317426 complement(4144445..4145902) 1 NC_017328.1 PTS system, fructose-like enzyme IIBC component 4145902 frvB 12317426 frvB Shigella flexneri 2002017 PTS system, fructose-like enzyme IIBC component YP_005729570.1 4144445 R 591020 CDS YP_005729571.1 384545507 12317427 complement(4145907..4146353) 1 NC_017328.1 PTS system fructose-specific transporter subunit IIA 4146353 frvA 12317427 frvA Shigella flexneri 2002017 PTS system fructose-specific transporter subunit IIA YP_005729571.1 4145907 R 591020 CDS YP_005729572.1 384545508 12317428 complement(4146654..4146968) 1 NC_017328.1 L-rhamnose 1-epimerase 4146968 rhaM 12317428 rhaM Shigella flexneri 2002017 L-rhamnose 1-epimerase YP_005729572.1 4146654 R 591020 CDS YP_005729573.1 384545509 12317429 complement(4146978..4147619) 1 NC_017328.1 putative ribulose-5-phosphate 4-epimerase-like epimerase and aldolase 4147619 rhaD 12317429 rhaD Shigella flexneri 2002017 putative ribulose-5-phosphate 4-epimerase-like epimerase and aldolase YP_005729573.1 4146978 R 591020 CDS YP_005729574.1 384545510 12317430 complement(4148044..4149303) 1 NC_017328.1 L-rhamnose isomerase 4149303 rhaA 12317430 rhaA Shigella flexneri 2002017 L-rhamnose isomerase YP_005729574.1 4148044 R 591020 CDS YP_005729575.1 384545511 12317431 complement(4149300..4150769) 1 NC_017328.1 Rhamnulokinase 4150769 rhaB 12317431 rhaB Shigella flexneri 2002017 Rhamnulokinase YP_005729575.1 4149300 R 591020 CDS YP_005729576.1 384545512 12317432 4150848..4150997 1 NC_017328.1 hypothetical protein 4150997 12317432 SFxv_4340 Shigella flexneri 2002017 hypothetical protein YP_005729576.1 4150848 D 591020 CDS YP_005729577.1 384545513 12317433 4151057..4151893 1 NC_017328.1 Positive regulator for rhaBAD operon 4151893 rhaS 12317433 rhaS Shigella flexneri 2002017 Positive regulator for rhaBAD operon YP_005729577.1 4151057 D 591020 CDS YP_005729578.1 384545514 12317434 4151967..4152815 1 NC_017328.1 putative AraC-type DNA-binding domain-containing protein 4152815 rhaR 12317434 rhaR Shigella flexneri 2002017 putative AraC-type DNA-binding domain-containing protein YP_005729578.1 4151967 D 591020 CDS YP_005729579.1 384545515 12317435 complement(4153013..4153846) 1 NC_017328.1 L-rhamnose-proton symporter (L-rhamnose-H(+) transport protein) 4153846 rhaT 12317435 rhaT Shigella flexneri 2002017 L-rhamnose-proton symporter (L-rhamnose-H(+) transport protein) YP_005729579.1 4153013 R 591020 CDS YP_005729580.1 384545516 12317436 4154131..4154751 1 NC_017328.1 Superoxide dismutase 4154751 sodA 12317436 sodA Shigella flexneri 2002017 Superoxide dismutase YP_005729580.1 4154131 D 591020 CDS YP_005729581.1 384545517 12317438 complement(4156024..4156929) 1 NC_017328.1 IS2 ORF2 4156929 12317438 SFxv_4348 Shigella flexneri 2002017 IS2 ORF2 YP_005729581.1 4156024 R 591020 CDS YP_005729582.1 384545518 12317439 4156453..4156884 1 NC_017328.1 putative IS2 ORF 4156884 12317439 SFxv_4346 Shigella flexneri 2002017 putative IS2 ORF YP_005729582.1 4156453 D 591020 CDS YP_005729583.1 384545519 12317440 complement(4156887..4157252) 1 NC_017328.1 IS2 ORF1 4157252 12317440 SFxv_4349 Shigella flexneri 2002017 IS2 ORF1 YP_005729583.1 4156887 R 591020 CDS YP_005729584.1 384545520 12317441 4157479..4158153 1 NC_017328.1 MOSC domain-containing protein 4158153 yiiM 12317441 yiiM Shigella flexneri 2002017 MOSC domain-containing protein YP_005729584.1 4157479 D 591020 CDS YP_005729585.1 384545521 12317442 complement(4158259..4159632) 1 NC_017328.1 putative Signal transduction histidine kinase 4159632 cpxA 12317442 cpxA Shigella flexneri 2002017 putative Signal transduction histidine kinase YP_005729585.1 4158259 R 591020 CDS YP_005729586.1 384545522 12317443 complement(4159629..4160327) 1 NC_017328.1 transcriptional regulatory protein cpxR 4160327 cpxR 12317443 cpxR Shigella flexneri 2002017 transcriptional regulatory protein cpxR YP_005729586.1 4159629 R 591020 CDS YP_005729587.1 384545523 12317444 4160477..4160977 1 NC_017328.1 putative P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein 4160977 cpxP 12317444 cpxP Shigella flexneri 2002017 putative P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein YP_005729587.1 4160477 D 591020 CDS YP_005729588.1 384545524 12317445 4161125..4162027 1 NC_017328.1 Ferrous-iron efflux pump fieF 4162027 fieF 12317445 fieF Shigella flexneri 2002017 Ferrous-iron efflux pump fieF YP_005729588.1 4161125 D 591020 CDS YP_005729589.1 384545525 12317446 4162148..4163170 1 NC_017328.1 6-phosphofructokinase 4163170 pfkA 12317446 pfkA Shigella flexneri 2002017 6-phosphofructokinase YP_005729589.1 4162148 D 591020 CDS YP_005729590.1 384545526 12317447 4163490..4164479 1 NC_017328.1 Sulfate-binding protein precursor 4164479 sbp 12317447 sbp Shigella flexneri 2002017 Sulfate-binding protein precursor YP_005729590.1 4163490 D 591020 CDS YP_005729591.1 384545527 12317448 4164394..4165341 1 NC_017328.1 CDP-diacylglycerol pyrophosphatase 4165341 cdh 12317448 cdh Shigella flexneri 2002017 CDP-diacylglycerol pyrophosphatase YP_005729591.1 4164394 D 591020 CDS YP_005729592.1 384545528 12317449 complement(4165396..4166163) 1 NC_017328.1 triosephosphate isomerase 4166163 tpiA 12317449 tpiA Shigella flexneri 2002017 triosephosphate isomerase YP_005729592.1 4165396 R 591020 CDS YP_005729593.1 384545529 12317450 complement(4166271..4166870) 1 NC_017328.1 hypothetical protein 4166870 12317450 SFxv_4359 Shigella flexneri 2002017 hypothetical protein YP_005729593.1 4166271 R 591020 CDS YP_005729594.1 384545530 12317452 4167623..4167922 1 NC_017328.1 hypothetical protein 4167922 12317452 SFxv_4361 Shigella flexneri 2002017 hypothetical protein YP_005729594.1 4167623 D 591020 CDS YP_005729595.1 384545531 12317453 4167949..4168377 1 NC_017328.1 Universal stress protein D 4168377 uspD 12317453 uspD Shigella flexneri 2002017 Universal stress protein D YP_005729595.1 4167949 D 591020 CDS YP_005729596.1 384545532 12317454 complement(4168382..4169128) 1 NC_017328.1 ferredoxin--NADP reductase 4169128 fpr 12317454 fpr Shigella flexneri 2002017 ferredoxin--NADP reductase YP_005729596.1 4168382 R 591020 CDS YP_005729597.1 384545533 12317455 complement(4169225..4170235) 1 NC_017328.1 Fructose-1,6-bisphosphatase, class II 4170235 glpX 12317455 glpX Shigella flexneri 2002017 Fructose-1,6-bisphosphatase, class II YP_005729597.1 4169225 R 591020 CDS YP_005729598.1 384545534 12317456 complement(4170465..4171910) 1 NC_017328.1 glycerol kinase 4171910 glpK 12317456 glpK Shigella flexneri 2002017 glycerol kinase YP_005729598.1 4170465 R 591020 CDS YP_005729599.1 384545535 12317457 complement(4172196..4172840) 1 NC_017328.1 Glycerol uptake facilitator protein 4172840 glpF 12317457 glpF Shigella flexneri 2002017 Glycerol uptake facilitator protein YP_005729599.1 4172196 R 591020 CDS YP_005729600.1 384545536 12317458 complement(4173596..4174081) 1 NC_017328.1 Regulator of ribonuclease activity A 4174081 rraA 12317458 rraA Shigella flexneri 2002017 Regulator of ribonuclease activity A YP_005729600.1 4173596 R 591020 CDS YP_005729601.1 384545537 12317459 complement(4174174..4175112) 1 NC_017328.1 1,4-dihydroxy-2-naphthoate octaprenyltransferase 4175112 menA 12317459 menA Shigella flexneri 2002017 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_005729601.1 4174174 R 591020 CDS YP_005729602.1 384545538 12317460 complement(4175167..4176498) 1 NC_017328.1 ATP-dependent protease ATP-binding subunit HslU 4176498 hslU 12317460 hslU Shigella flexneri 2002017 ATP-dependent protease ATP-binding subunit HslU YP_005729602.1 4175167 R 591020 CDS YP_005729603.1 384545539 12317461 complement(4176508..4177038) 1 NC_017328.1 ATP-dependent protease hslV 4177038 hslV 12317461 hslV Shigella flexneri 2002017 ATP-dependent protease hslV YP_005729603.1 4176508 R 591020 CDS YP_005729604.1 384545540 12317462 complement(4177131..4178090) 1 NC_017328.1 Cell division protein ftsN 4178090 ftsN 12317462 ftsN Shigella flexneri 2002017 Cell division protein ftsN YP_005729604.1 4177131 R 591020 CDS YP_005729605.1 384545541 12317463 complement(4178182..4179213) 1 NC_017328.1 Transcriptional repressor CytR 4179213 cytR 12317463 cytR Shigella flexneri 2002017 Transcriptional repressor CytR YP_005729605.1 4178182 R 591020 CDS YP_005729606.1 384545542 12317464 complement(4179363..4181633) 1 NC_017328.1 Primosome assembly protein PriA 4181633 priA 12317464 priA Shigella flexneri 2002017 Primosome assembly protein PriA YP_005729606.1 4179363 R 591020 CDS YP_005729607.1 384545543 12317465 4181764..4181976 1 NC_017328.1 50S ribosomal protein L31 4181976 rpmE 12317465 rpmE Shigella flexneri 2002017 50S ribosomal protein L31 YP_005729607.1 4181764 D 591020 CDS YP_005729608.1 384545544 12317466 complement(4182037..4182645) 1 NC_017328.1 hypothetical protein 4182645 12317466 SFxv_4376 Shigella flexneri 2002017 hypothetical protein YP_005729608.1 4182037 R 591020 CDS YP_005729609.1 384545545 12317467 complement(4182829..4183191) 1 NC_017328.1 Transcriptional repressor 4183191 metJ 12317467 metJ Shigella flexneri 2002017 Transcriptional repressor YP_005729609.1 4182829 R 591020 CDS YP_005729610.1 384545546 12317468 4183279..4184583 1 NC_017328.1 cystathionine gamma-synthase 4184583 metB 12317468 metB Shigella flexneri 2002017 cystathionine gamma-synthase YP_005729610.1 4183279 D 591020 CDS YP_005729611.1 384545547 12317469 4184586..4187018 1 NC_017328.1 Aspartokinase II and homoserine dehydrogenase II 4187018 metL 12317469 metL Shigella flexneri 2002017 Aspartokinase II and homoserine dehydrogenase II YP_005729611.1 4184586 D 591020 CDS YP_005729612.1 384545548 12317470 4187367..4188257 1 NC_017328.1 5,10-methylenetetrahydrofolate reductase 4188257 metF 12317470 metF Shigella flexneri 2002017 5,10-methylenetetrahydrofolate reductase YP_005729612.1 4187367 D 591020 CDS YP_005729613.1 384545549 12317471 4188586..4190766 1 NC_017328.1 Peroxidase/catalase 4190766 katG 12317471 katG Shigella flexneri 2002017 Peroxidase/catalase YP_005729613.1 4188586 D 591020 CDS YP_005729614.1 384545550 12317472 4190827..4191765 1 NC_017328.1 hypothetical protein 4191765 12317472 SFxv_4383 Shigella flexneri 2002017 hypothetical protein YP_005729614.1 4190827 D 591020 CDS YP_005729615.1 384545551 12317473 complement(4191792..4192427) 1 NC_017328.1 hypothetical protein 4192427 12317473 SFxv_4384 Shigella flexneri 2002017 hypothetical protein YP_005729615.1 4191792 R 591020 CDS YP_005729616.1 384545552 12317477 4197270..4198349 1 NC_017328.1 PTS system, fructose-like-2 IIC component 4198349 frwC 12317477 frwC Shigella flexneri 2002017 PTS system, fructose-like-2 IIC component YP_005729616.1 4197270 D 591020 CDS YP_005729617.1 384545553 12317478 4198364..4198684 1 NC_017328.1 PTS system fructose-like IIB component 1 4198684 frwB 12317478 frwB Shigella flexneri 2002017 PTS system fructose-like IIB component 1 YP_005729617.1 4198364 D 591020 CDS YP_005729618.1 384545554 12317479 4198735..4201020 1 NC_017328.1 Formate acetyltransferase 2 4201020 pflD 12317479 pflD Shigella flexneri 2002017 Formate acetyltransferase 2 YP_005729618.1 4198735 D 591020 CDS YP_005729619.1 384545555 12317480 4200986..4201864 1 NC_017328.1 Glycyl-radical enzyme activating protein family 4201864 pflC 12317480 pflC Shigella flexneri 2002017 Glycyl-radical enzyme activating protein family YP_005729619.1 4200986 D 591020 CDS YP_005729620.1 384545556 12317481 4201866..4202207 1 NC_017328.1 PTS system fructose-like IIB component 2 4202207 frwD 12317481 frwD Shigella flexneri 2002017 PTS system fructose-like IIB component 2 YP_005729620.1 4201866 D 591020 CDS YP_005729621.1 384545557 12317482 complement(4202194..4203045) 1 NC_017328.1 AraC family transcriptional regulator 4203045 yijO 12317482 yijO Shigella flexneri 2002017 AraC family transcriptional regulator YP_005729621.1 4202194 R 591020 CDS YP_005729622.1 384545558 12317483 complement(4203194..4204927) 1 NC_017328.1 sulfatase 4204927 yijP 12317483 yijP Shigella flexneri 2002017 sulfatase YP_005729622.1 4203194 R 591020 CDS YP_005729623.1 384545559 12317484 complement(4205110..4207761) 1 NC_017328.1 phosphoenolpyruvate carboxylase 4207761 ppc 12317484 ppc Shigella flexneri 2002017 phosphoenolpyruvate carboxylase YP_005729623.1 4205110 R 591020 CDS YP_005729624.1 384545560 12317485 complement(4208113..4209264) 1 NC_017328.1 Acetylornithine deacetylase 4209264 argE 12317485 argE Shigella flexneri 2002017 Acetylornithine deacetylase YP_005729624.1 4208113 R 591020 CDS YP_005729625.1 384545561 12317486 4209418..4210422 1 NC_017328.1 N-acetyl-gamma-glutamyl-phosphate reductase 4210422 argC 12317486 argC Shigella flexneri 2002017 N-acetyl-gamma-glutamyl-phosphate reductase YP_005729625.1 4209418 D 591020 CDS YP_005729626.1 384545562 12317487 4210397..4211206 1 NC_017328.1 Acetylglutamate kinase 4211206 argB 12317487 argB Shigella flexneri 2002017 Acetylglutamate kinase YP_005729626.1 4210397 D 591020 CDS YP_005729627.1 384545563 12317488 4211267..4212640 1 NC_017328.1 argininosuccinate lyase 4212640 argH 12317488 argH Shigella flexneri 2002017 argininosuccinate lyase YP_005729627.1 4211267 D 591020 CDS YP_005729628.1 384545564 12317489 4212824..4214170 1 NC_017328.1 IS4 ORF 4214170 12317489 SFxv_4401 Shigella flexneri 2002017 IS4 ORF YP_005729628.1 4212824 D 591020 CDS YP_005729629.1 384545565 12317490 4214578..4215792 1 NC_017328.1 Starvation-sensing protein 4215792 12317490 SFxv_4402 Shigella flexneri 2002017 Starvation-sensing protein YP_005729629.1 4214578 D 591020 CDS YP_005729630.1 384545566 12317573 complement(4216199..4216399) 1 NC_017328.1 IS600 ORF2 4216399 12317573 SFxv_4403 Shigella flexneri 2002017 IS600 ORF2 YP_005729630.1 4216199 R 591020 CDS YP_005729631.1 384545567 12317574 4216474..4216977 1 NC_017328.1 IS1 orfB 4216977 12317574 SFxv_4404 Shigella flexneri 2002017 IS1 orfB YP_005729631.1 4216474 D 591020 CDS YP_005729632.1 384545568 12317575 4218172..4219089 1 NC_017328.1 Activator of hydrogen peroxide-inducible genes OxyR 4219089 oxyR 12317575 oxyR Shigella flexneri 2002017 Activator of hydrogen peroxide-inducible genes OxyR YP_005729632.1 4218172 D 591020 CDS YP_005729633.1 384545569 12317576 complement(4219072..4220472) 1 NC_017328.1 pyridine nucleotide transhydrogenase 4220472 sthA 12317576 sthA Shigella flexneri 2002017 pyridine nucleotide transhydrogenase YP_005729633.1 4219072 R 591020 CDS YP_005729634.1 384545570 12317577 4220580..4221443 1 NC_017328.1 putative transcriptional regulator 4221443 fabR 12317577 fabR Shigella flexneri 2002017 putative transcriptional regulator YP_005729634.1 4220580 D 591020 CDS YP_005729635.1 384545571 12317578 4221443..4221802 1 NC_017328.1 Inner membrane protein yijD 4221802 yijD 12317578 yijD Shigella flexneri 2002017 Inner membrane protein yijD YP_005729635.1 4221443 D 591020 CDS YP_005729636.1 384545572 12317579 complement(4221842..4222942) 1 NC_017328.1 tRNA (uracil-5-)-methyltransferase 4222942 trmA 12317579 trmA Shigella flexneri 2002017 tRNA (uracil-5-)-methyltransferase YP_005729636.1 4221842 R 591020 CDS YP_005729637.1 384545573 12317580 4223266..4225155 1 NC_017328.1 Vitamin B12 transporter btuB precursor 4225155 btuB 12317580 btuB Shigella flexneri 2002017 Vitamin B12 transporter btuB precursor YP_005729637.1 4223266 D 591020 CDS YP_005729638.1 384545574 12317581 4225100..4225957 1 NC_017328.1 putative Glutamate racemase 4225957 murI 12317581 murI Shigella flexneri 2002017 putative Glutamate racemase YP_005729638.1 4225100 D 591020 CDS YP_005729639.1 384545575 12317586 4231469..4232497 1 NC_017328.1 UDP-N-acetylenolpyruvoylglucosamine reductase 4232497 murB 12317586 murB Shigella flexneri 2002017 UDP-N-acetylenolpyruvoylglucosamine reductase YP_005729639.1 4231469 D 591020 CDS YP_005729640.1 384545576 12317587 4232494..4233459 1 NC_017328.1 Biotin-[acetyl CoA carboxylase] holoenzyme synthetase and biotin operon repressor 4233459 birA 12317587 birA Shigella flexneri 2002017 Biotin-[acetyl CoA carboxylase] holoenzyme synthetase and biotin operon repressor YP_005729640.1 4232494 D 591020 CDS YP_005729641.1 384545577 12317588 complement(4233488..4234594) 1 NC_017328.1 Pantothenate kinase 4234594 coaA 12317588 coaA Shigella flexneri 2002017 Pantothenate kinase YP_005729641.1 4233488 R 591020 CDS YP_005729642.1 384545578 12317589 complement(4234625..4234780) 1 NC_017328.1 hypothetical protein 4234780 12317589 SFxv_4419 Shigella flexneri 2002017 hypothetical protein YP_005729642.1 4234625 R 591020 CDS YP_005729643.1 384545579 12317594 4235356..4236540 1 NC_017328.1 Elongation factor Tu 4236540 tufB 12317594 tufB Shigella flexneri 2002017 Elongation factor Tu YP_005729643.1 4235356 D 591020 CDS YP_005729644.1 384545580 12317595 4236770..4237153 1 NC_017328.1 Preprotein translocase 4237153 secE 12317595 secE Shigella flexneri 2002017 Preprotein translocase YP_005729644.1 4236770 D 591020 CDS YP_005729645.1 384545581 12317596 4237155..4237700 1 NC_017328.1 Transcription antitermination protein nusG 4237700 nusG 12317596 nusG Shigella flexneri 2002017 Transcription antitermination protein nusG YP_005729645.1 4237155 D 591020 CDS YP_005729646.1 384545582 12317597 4237859..4238287 1 NC_017328.1 50S ribosomal protein L11 4238287 rplK 12317597 rplK Shigella flexneri 2002017 50S ribosomal protein L11 YP_005729646.1 4237859 D 591020 CDS YP_005729647.1 384545583 12317598 4238291..4238995 1 NC_017328.1 50S ribosomal protein L1 4238995 rplA 12317598 rplA Shigella flexneri 2002017 50S ribosomal protein L1 YP_005729647.1 4238291 D 591020 CDS YP_005729648.1 384545584 12317599 4239408..4239905 1 NC_017328.1 50S ribosomal protein L10 4239905 rplJ 12317599 rplJ Shigella flexneri 2002017 50S ribosomal protein L10 YP_005729648.1 4239408 D 591020 CDS YP_005729649.1 384545585 12317600 4239972..4240337 1 NC_017328.1 50S ribosomal protein L7/L12 4240337 rplL 12317600 rplL Shigella flexneri 2002017 50S ribosomal protein L7/L12 YP_005729649.1 4239972 D 591020 CDS YP_005729650.1 384545586 12317601 4240657..4244685 1 NC_017328.1 DNA-directed RNA polymerase subunit beta 4244685 rpoB 12317601 rpoB Shigella flexneri 2002017 DNA-directed RNA polymerase subunit beta YP_005729650.1 4240657 D 591020 CDS YP_005729651.1 384545587 12317602 4244762..4248985 1 NC_017328.1 DNA-directed RNA polymerase subunit beta 4248985 rpoC 12317602 rpoC Shigella flexneri 2002017 DNA-directed RNA polymerase subunit beta YP_005729651.1 4244762 D 591020 CDS YP_005729652.1 384545588 12317603 complement(4249227..4250360) 1 NC_017328.1 Thiamin biosynthesis protein, thiazole moiety 4250360 thiH 12317603 thiH Shigella flexneri 2002017 Thiamin biosynthesis protein, thiazole moiety YP_005729652.1 4249227 R 591020 CDS YP_005729653.1 384545589 12317604 complement(4250357..4251385) 1 NC_017328.1 Thiazole biosynthesis protein ThiG 4251385 thiG 12317604 thiG Shigella flexneri 2002017 Thiazole biosynthesis protein ThiG YP_005729653.1 4250357 R 591020 CDS YP_005729654.1 384545590 12317605 complement(4251313..4252068) 1 NC_017328.1 Thiamin biosynthesis protein, thiazole moiety 4252068 thiF 12317605 thiF Shigella flexneri 2002017 Thiamin biosynthesis protein, thiazole moiety YP_005729654.1 4251313 R 591020 CDS YP_005729655.1 384545591 12317606 complement(4252061..4252696) 1 NC_017328.1 thiamine-phosphate pyrophosphorylase 4252696 thiE 12317606 thiE Shigella flexneri 2002017 thiamine-phosphate pyrophosphorylase YP_005729655.1 4252061 R 591020 CDS YP_005729656.1 384545592 12317607 complement(4252696..4254591) 1 NC_017328.1 Thiamine biosynthesis protein thiC 4254591 thiC 12317607 thiC Shigella flexneri 2002017 Thiamine biosynthesis protein thiC YP_005729656.1 4252696 R 591020 CDS YP_005729657.1 384545593 12317608 complement(4254825..4255301) 1 NC_017328.1 Regulator of sigma D 4255301 rsd 12317608 rsd Shigella flexneri 2002017 Regulator of sigma D YP_005729657.1 4254825 R 591020 CDS YP_005729658.1 384545594 12317609 4255396..4256169 1 NC_017328.1 NADH pyrophosphatase 4256169 nudC 12317609 nudC Shigella flexneri 2002017 NADH pyrophosphatase YP_005729658.1 4255396 D 591020 CDS YP_005729659.1 384545595 12317611 4257429..4258100 1 NC_017328.1 Endonuclease V 4258100 nfi 12317611 nfi Shigella flexneri 2002017 Endonuclease V YP_005729659.1 4257429 D 591020 CDS YP_005729660.1 384545596 12317612 4258143..4258733 1 NC_017328.1 hypothetical protein 4258733 yjaG 12317612 yjaG Shigella flexneri 2002017 hypothetical protein YP_005729660.1 4258143 D 591020 CDS YP_005729661.1 384545597 12317613 4258920..4259192 1 NC_017328.1 DNA-binding protein HU-alpha 4259192 hupA 12317613 hupA Shigella flexneri 2002017 DNA-binding protein HU-alpha YP_005729661.1 4258920 D 591020 CDS YP_005729662.1 384545598 12317614 4259205..4259900 1 NC_017328.1 hypothetical protein 4259900 12317614 SFxv_4440 Shigella flexneri 2002017 hypothetical protein YP_005729662.1 4259205 D 591020 CDS YP_005729663.1 384545599 12317615 complement(4259902..4260468) 1 NC_017328.1 Periplasmic zinc resistance-associated protein 4260468 zraP 12317615 zraP Shigella flexneri 2002017 Periplasmic zinc resistance-associated protein YP_005729663.1 4259902 R 591020 CDS YP_005729664.1 384545600 12317616 4260565..4261941 1 NC_017328.1 Sensor histidine kinase ZraS 4261941 zraS 12317616 zraS Shigella flexneri 2002017 Sensor histidine kinase ZraS YP_005729664.1 4260565 D 591020 CDS YP_005729665.1 384545601 12317617 4261938..4263263 1 NC_017328.1 Two component, sigma54 specific, transcriptional regulator, Fis family 4263263 zraR 12317617 zraR Shigella flexneri 2002017 Two component, sigma54 specific, transcriptional regulator, Fis family YP_005729665.1 4261938 D 591020 CDS YP_005729666.1 384545602 12317618 complement(4263260..4264549) 1 NC_017328.1 Phosphoribosylglycinamide synthetase, GAR synthetase 4264549 purD 12317618 purD Shigella flexneri 2002017 Phosphoribosylglycinamide synthetase, GAR synthetase YP_005729666.1 4263260 R 591020 CDS YP_005729667.1 384545603 12317619 complement(4264561..4266150) 1 NC_017328.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 4266150 purH 12317619 purH Shigella flexneri 2002017 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_005729667.1 4264561 R 591020 CDS YP_005729668.1 384545604 12317624 complement(4271892..4272335) 1 NC_017328.1 putative histone acetyltransferase HPA2-like acetyltransferase 4272335 yjaB 12317624 yjaB Shigella flexneri 2002017 putative histone acetyltransferase HPA2-like acetyltransferase YP_005729668.1 4271892 R 591020 CDS YP_005729669.1 384545605 12317625 4272492..4273421 1 NC_017328.1 Homoserine O-succinyltransferase 4273421 metA 12317625 metA Shigella flexneri 2002017 Homoserine O-succinyltransferase YP_005729669.1 4272492 D 591020 CDS YP_005729670.1 384545606 12317627 4275321..4276625 1 NC_017328.1 Isocitrate lyase 4276625 aceA 12317627 aceA Shigella flexneri 2002017 Isocitrate lyase YP_005729670.1 4275321 D 591020 CDS YP_005729671.1 384545607 12317629 complement(4278868..4280274) 1 NC_017328.1 Regulator of acetyl CoA synthetase 4280274 arpA 12317629 arpA Shigella flexneri 2002017 Regulator of acetyl CoA synthetase YP_005729671.1 4278868 R 591020 CDS YP_005729672.1 384545608 12317630 complement(4281016..4281840) 1 NC_017328.1 Repressor of aceBA operon 4281840 iclR 12317630 iclR Shigella flexneri 2002017 Repressor of aceBA operon YP_005729672.1 4281016 R 591020 CDS YP_005729673.1 384545609 12317631 4282040..4285723 1 NC_017328.1 B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase 4285723 metH 12317631 metH Shigella flexneri 2002017 B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase YP_005729673.1 4282040 D 591020 CDS YP_005729674.1 384545610 12317633 4285943..4287574 1 NC_017328.1 putative Na+/phosphate symporter 4287574 yjbB 12317633 yjbB Shigella flexneri 2002017 putative Na+/phosphate symporter YP_005729674.1 4285943 D 591020 CDS YP_005729675.1 384545611 12317634 complement(4287665..4288354) 1 NC_017328.1 Peptidase E 4288354 pepE 12317634 pepE Shigella flexneri 2002017 Peptidase E YP_005729675.1 4287665 R 591020 CDS YP_005729676.1 384545612 12317635 complement(4288736..4289965) 1 NC_017328.1 putative L-sorbose-1-P-reductase 4289965 12317635 SFxv_4458 Shigella flexneri 2002017 putative L-sorbose-1-P-reductase YP_005729676.1 4288736 R 591020 CDS YP_005729677.1 384545613 12317636 complement(4290017..4290805) 1 NC_017328.1 putative sorbose-permease PTS system IID component 4290805 12317636 SFxv_4459 Shigella flexneri 2002017 putative sorbose-permease PTS system IID component YP_005729677.1 4290017 R 591020 CDS YP_005729678.1 384545614 12317637 complement(4290816..4291613) 1 NC_017328.1 putative sorbose-permease PTS system IIC component 4291613 12317637 SFxv_4460 Shigella flexneri 2002017 putative sorbose-permease PTS system IIC component YP_005729678.1 4290816 R 591020 CDS YP_005729679.1 384545615 12317638 complement(4291679..4292173) 1 NC_017328.1 PTS system, sorbose-specific IIB component 4292173 12317638 SFxv_4461 Shigella flexneri 2002017 PTS system, sorbose-specific IIB component YP_005729679.1 4291679 R 591020 CDS YP_005729680.1 384545616 12317639 complement(4292173..4292580) 1 NC_017328.1 putative sorbose-permease PTS system IIA component 4292580 12317639 SFxv_4462 Shigella flexneri 2002017 putative sorbose-permease PTS system IIA component YP_005729680.1 4292173 R 591020 CDS YP_005729681.1 384545617 12317640 complement(4292590..4293396) 1 NC_017328.1 putative sorbitol-6-phosphate 2-dehydrogenase 4293396 12317640 SFxv_4463 Shigella flexneri 2002017 putative sorbitol-6-phosphate 2-dehydrogenase YP_005729681.1 4292590 R 591020 CDS YP_005729682.1 384545618 12317641 complement(4293466..4294413) 1 NC_017328.1 putative sor-operon regulator 4294413 12317641 SFxv_4464 Shigella flexneri 2002017 putative sor-operon regulator YP_005729682.1 4293466 R 591020 CDS YP_005729683.1 384545619 12317642 4294761..4295633 1 NC_017328.1 Ribosomal large subunit pseudouridine synthase F 4295633 12317642 SFxv_4465 Shigella flexneri 2002017 Ribosomal large subunit pseudouridine synthase F YP_005729683.1 4294761 D 591020 CDS YP_005729684.1 384545620 12317643 complement(4295959..4296864) 1 NC_017328.1 IS2 ORF2 4296864 12317643 SFxv_4469 Shigella flexneri 2002017 IS2 ORF2 YP_005729684.1 4295959 R 591020 CDS YP_005729685.1 384545621 12317644 4296388..4296819 1 NC_017328.1 putative IS2 ORF 4296819 12317644 SFxv_4467 Shigella flexneri 2002017 putative IS2 ORF YP_005729685.1 4296388 D 591020 CDS YP_005729686.1 384545622 12317645 complement(4296822..4297187) 1 NC_017328.1 IS2 ORF1 4297187 12317645 SFxv_4470 Shigella flexneri 2002017 IS2 ORF1 YP_005729686.1 4296822 R 591020 CDS YP_005729687.1 384545623 12317646 complement(4297476..4297610) 1 NC_017328.1 hypothetical protein 4297610 12317646 SFxv_4472 Shigella flexneri 2002017 hypothetical protein YP_005729687.1 4297476 R 591020 CDS YP_005729688.1 384545624 12317647 4297602..4299233 1 NC_017328.1 Sensory box sensor histidine kinase DcuS 4299233 dcuS 12317647 dcuS Shigella flexneri 2002017 Sensory box sensor histidine kinase DcuS YP_005729688.1 4297602 D 591020 CDS YP_005729689.1 384545625 12317648 4299230..4299949 1 NC_017328.1 putative Response regulator of citrate/malate metabolism 4299949 dcuR 12317648 dcuR Shigella flexneri 2002017 putative Response regulator of citrate/malate metabolism YP_005729689.1 4299230 D 591020 CDS YP_005729690.1 384545626 12317649 4300520..4301860 1 NC_017328.1 Anaerobic C4-dicarboxylate transporter dcuB 4301860 dcuB 12317649 dcuB Shigella flexneri 2002017 Anaerobic C4-dicarboxylate transporter dcuB YP_005729690.1 4300520 D 591020 CDS YP_005729691.1 384545627 12317650 4301938..4303584 1 NC_017328.1 Fumarase B, fumarate hydratase Class I 4303584 fumB 12317650 fumB Shigella flexneri 2002017 Fumarase B, fumarate hydratase Class I YP_005729691.1 4301938 D 591020 CDS YP_005729692.1 384545628 12317651 4303707..4304336 1 NC_017328.1 hypothetical protein 4304336 yjdF 12317651 yjdF Shigella flexneri 2002017 hypothetical protein YP_005729692.1 4303707 D 591020 CDS YP_005729693.1 384545629 12317652 complement(4304475..4305884) 1 NC_017328.1 Melibiose permease II 4305884 melB 12317652 melB Shigella flexneri 2002017 Melibiose permease II YP_005729693.1 4304475 R 591020 CDS YP_005729694.1 384545630 12317734 complement(4305999..4307354) 1 NC_017328.1 alpha-galactosidase 4307354 melA 12317734 melA Shigella flexneri 2002017 alpha-galactosidase YP_005729694.1 4305999 R 591020 CDS YP_005729695.1 384545631 12317735 4307637..4308545 1 NC_017328.1 Regulator of melibiose operon 4308545 melR 12317735 melR Shigella flexneri 2002017 Regulator of melibiose operon YP_005729695.1 4307637 D 591020 CDS YP_005729696.1 384545632 12317736 4308741..4311011 1 NC_017328.1 Biodegradative arginine decarboxylase 4311011 adiA 12317736 adiA Shigella flexneri 2002017 Biodegradative arginine decarboxylase YP_005729696.1 4308741 D 591020 CDS YP_005729697.1 384545633 12317737 4311336..4312097 1 NC_017328.1 AraC family transcriptional regulator 4312097 adiY 12317737 adiY Shigella flexneri 2002017 AraC family transcriptional regulator YP_005729697.1 4311336 D 591020 CDS YP_005729698.1 384545634 12317738 4312234..4313571 1 NC_017328.1 Arginine/agmatine antiporter 4313571 adiC 12317738 adiC Shigella flexneri 2002017 Arginine/agmatine antiporter YP_005729698.1 4312234 D 591020 CDS YP_005729699.1 384545635 12317739 4313630..4315318 1 NC_017328.1 sulfatase 4315318 eptA 12317739 eptA Shigella flexneri 2002017 sulfatase YP_005729699.1 4313630 D 591020 CDS YP_005729700.1 384545636 12317740 4315315..4315983 1 NC_017328.1 transcriptional regulatory protein 4315983 basR 12317740 basR Shigella flexneri 2002017 transcriptional regulatory protein YP_005729700.1 4315315 D 591020 CDS YP_005729701.1 384545637 12317741 4315984..4317084 1 NC_017328.1 putative Sensor protein 4317084 basS 12317741 basS Shigella flexneri 2002017 putative Sensor protein YP_005729701.1 4315984 D 591020 CDS YP_005729702.1 384545638 12317742 complement(4317261..4318763) 1 NC_017328.1 Proline/betaine transporter 4318763 proP 12317742 proP Shigella flexneri 2002017 Proline/betaine transporter YP_005729702.1 4317261 R 591020 CDS YP_005729703.1 384545639 12317743 complement(4319027..4319905) 1 NC_017328.1 hypothetical protein 4319905 12317743 SFxv_4487 Shigella flexneri 2002017 hypothetical protein YP_005729703.1 4319027 R 591020 CDS YP_005729704.1 384545640 12317744 complement(4319902..4322130) 1 NC_017328.1 putative vimentin 4322130 yjdA 12317744 yjdA Shigella flexneri 2002017 putative vimentin YP_005729704.1 4319902 R 591020 CDS YP_005729705.1 384545641 12317745 4322386..4322868 1 NC_017328.1 hypothetical protein 4322868 12317745 SFxv_4489 Shigella flexneri 2002017 hypothetical protein YP_005729705.1 4322386 D 591020 CDS YP_005729706.1 384545642 12317746 4323026..4323469 1 NC_017328.1 hypothetical protein 4323469 12317746 SFxv_4490 Shigella flexneri 2002017 hypothetical protein YP_005729706.1 4323026 D 591020 CDS YP_005729707.1 384545643 12317747 4323602..4324390 1 NC_017328.1 Phosphonates import ATP-binding protein phnC 4324390 phnC 12317747 phnC Shigella flexneri 2002017 Phosphonates import ATP-binding protein phnC YP_005729707.1 4323602 D 591020 CDS YP_005729708.1 384545644 12317748 4324415..4325431 1 NC_017328.1 Periplasmic binding protein component of phosphonate transporter 4325431 phnD 12317748 phnD Shigella flexneri 2002017 Periplasmic binding protein component of phosphonate transporter YP_005729708.1 4324415 D 591020 CDS YP_005729709.1 384545645 12317749 4325483..4325710 1 NC_017328.1 Membrane channel protein component of phosphonate transporter 4325710 12317749 SFxv_4493 Shigella flexneri 2002017 Membrane channel protein component of phosphonate transporter YP_005729709.1 4325483 D 591020 CDS YP_005729710.1 384545646 12317750 complement(4325704..4326207) 1 NC_017328.1 IS1 orfB 4326207 12317750 SFxv_4494 Shigella flexneri 2002017 IS1 orfB YP_005729710.1 4325704 R 591020 CDS YP_005729711.1 384545647 12317751 4326321..4326857 1 NC_017328.1 putative integrase encoded by prophage CP-933K 4326857 12317751 SFxv_4495 Shigella flexneri 2002017 putative integrase encoded by prophage CP-933K YP_005729711.1 4326321 D 591020 CDS YP_005729712.1 384545648 12317753 complement(4328761..4329084) 1 NC_017328.1 Regulation of superoxide response regulon 4329084 soxS 12317753 soxS Shigella flexneri 2002017 Regulation of superoxide response regulon YP_005729712.1 4328761 R 591020 CDS YP_005729713.1 384545649 12317754 4329170..4329634 1 NC_017328.1 Redox-sensitive transcriptional activator soxR 4329634 soxR 12317754 soxR Shigella flexneri 2002017 Redox-sensitive transcriptional activator soxR YP_005729713.1 4329170 D 591020 CDS YP_005729714.1 384545650 12317755 4330340..4331689 1 NC_017328.1 Inorganic anion transporter, sulfate permease (SulP) family 4331689 yjcD 12317755 yjcD Shigella flexneri 2002017 Inorganic anion transporter, sulfate permease (SulP) family YP_005729714.1 4330340 D 591020 CDS YP_005729715.1 384545651 12317756 4331840..4333489 1 NC_017328.1 Na+/H+ antiporter 4333489 yjcE 12317756 yjcE Shigella flexneri 2002017 Na+/H+ antiporter YP_005729715.1 4331840 D 591020 CDS YP_005729716.1 384545652 12317757 complement(4333643..4334935) 1 NC_017328.1 Pentapeptide repeat protein 4334935 yjcF 12317757 yjcF Shigella flexneri 2002017 Pentapeptide repeat protein YP_005729716.1 4333643 R 591020 CDS YP_005729717.1 384545653 12317758 complement(4335113..4336762) 1 NC_017328.1 Cation/acetate symporter actP 4336762 actP 12317758 actP Shigella flexneri 2002017 Cation/acetate symporter actP YP_005729717.1 4335113 R 591020 CDS YP_005729718.1 384545654 12317759 complement(4336759..4337073) 1 NC_017328.1 Inner membrane protein yjcH 4337073 yjcH 12317759 yjcH Shigella flexneri 2002017 Inner membrane protein yjcH YP_005729718.1 4336759 R 591020 CDS YP_005729719.1 384545655 12317761 4339591..4341060 1 NC_017328.1 Cytochrome c-552 precursor 4341060 nrfA 12317761 nrfA Shigella flexneri 2002017 Cytochrome c-552 precursor YP_005729719.1 4339591 D 591020 CDS YP_005729720.1 384545656 12317762 4341099..4341671 1 NC_017328.1 Formate-dependent nitrite reductase 4341671 nrfB 12317762 nrfB Shigella flexneri 2002017 Formate-dependent nitrite reductase YP_005729720.1 4341099 D 591020 CDS YP_005729721.1 384545657 12317763 4341668..4342339 1 NC_017328.1 putative Fe-S-cluster-containing hydrogenase components 1 4342339 nrfC 12317763 nrfC Shigella flexneri 2002017 putative Fe-S-cluster-containing hydrogenase components 1 YP_005729721.1 4341668 D 591020 CDS YP_005729722.1 384545658 12317764 4342336..4343292 1 NC_017328.1 Formate-dependent nitrate reductase, transmembrane protein 4343292 nrfD 12317764 nrfD Shigella flexneri 2002017 Formate-dependent nitrate reductase, transmembrane protein YP_005729722.1 4342336 D 591020 CDS YP_005729723.1 384545659 12317765 4343372..4345030 1 NC_017328.1 Formate-dependent nitrite reductase 4345030 nrfE 12317765 nrfE Shigella flexneri 2002017 Formate-dependent nitrite reductase YP_005729723.1 4343372 D 591020 CDS YP_005729724.1 384545660 12317766 4345403..4345999 1 NC_017328.1 Formate-dependent nitrite reductase complex NrfG subunit 4345999 nrfG 12317766 nrfG Shigella flexneri 2002017 Formate-dependent nitrite reductase complex NrfG subunit YP_005729724.1 4345403 D 591020 CDS YP_005729725.1 384545661 12317767 complement(4346133..4346261) 1 NC_017328.1 hypothetical protein 4346261 12317767 SFxv_4513 Shigella flexneri 2002017 hypothetical protein YP_005729725.1 4346133 R 591020 CDS YP_005729726.1 384545662 12317768 4346341..4347654 1 NC_017328.1 Glutamate-aspartate symport protein 4347654 gltP 12317768 gltP Shigella flexneri 2002017 Glutamate-aspartate symport protein YP_005729726.1 4346341 D 591020 CDS YP_005729727.1 384545663 12317769 complement(4347732..4348421) 1 NC_017328.1 hypothetical protein 4348421 12317769 SFxv_4515 Shigella flexneri 2002017 hypothetical protein YP_005729727.1 4347732 R 591020 CDS YP_005729728.1 384545664 12317771 complement(4350860..4352326) 1 NC_017328.1 Multidrug resistance outer membrane protein mdtP precursor 4352326 mdtP 12317771 mdtP Shigella flexneri 2002017 Multidrug resistance outer membrane protein mdtP precursor YP_005729728.1 4350860 R 591020 CDS YP_005729729.1 384545665 12317772 complement(4352465..4354297) 1 NC_017328.1 Multidrug resistance protein mdtO 4354297 mdtO 12317772 mdtO Shigella flexneri 2002017 Multidrug resistance protein mdtO YP_005729729.1 4352465 R 591020 CDS YP_005729730.1 384545666 12317773 complement(4354297..4355328) 1 NC_017328.1 Multidrug resistance protein mdtN 4355328 mdtN 12317773 mdtN Shigella flexneri 2002017 Multidrug resistance protein mdtN YP_005729730.1 4354297 R 591020 CDS YP_005729731.1 384545667 12317774 complement(4355294..4355614) 1 NC_017328.1 putative integrase encoded by prophage CP-933K 4355614 12317774 SFxv_4520 Shigella flexneri 2002017 putative integrase encoded by prophage CP-933K YP_005729731.1 4355294 R 591020 CDS YP_005729732.1 384545668 12317775 4355689..4356192 1 NC_017328.1 IS1 orfB 4356192 12317775 SFxv_4521 Shigella flexneri 2002017 IS1 orfB YP_005729732.1 4355689 D 591020 CDS YP_005729733.1 384545669 12317776 4357090..4359912 1 NC_017328.1 UvrABC system protein A 4359912 uvrA 12317776 uvrA Shigella flexneri 2002017 UvrABC system protein A YP_005729733.1 4357090 D 591020 CDS YP_005729734.1 384545670 12317777 complement(4359947..4360303) 1 NC_017328.1 hypothetical protein 4360303 12317777 SFxv_4523 Shigella flexneri 2002017 hypothetical protein YP_005729734.1 4359947 R 591020 CDS YP_005729735.1 384545671 12317778 complement(4360307..4360723) 1 NC_017328.1 hypothetical protein 4360723 12317778 SFxv_4524 Shigella flexneri 2002017 hypothetical protein YP_005729735.1 4360307 R 591020 CDS YP_005729736.1 384545672 12317779 complement(4360834..4361787) 1 NC_017328.1 diadenosine tetraphosphatase 4361787 aphA 12317779 aphA Shigella flexneri 2002017 diadenosine tetraphosphatase YP_005729736.1 4360834 R 591020 CDS YP_005729737.1 384545673 12317780 4361949..4362317 1 NC_017328.1 hypothetical protein 4362317 12317780 SFxv_4526 Shigella flexneri 2002017 hypothetical protein YP_005729737.1 4361949 D 591020 CDS YP_005729738.1 384545674 12317781 complement(4362656..4363849) 1 NC_017328.1 Tyrosine aminotransferase 4363849 tyrB 12317781 tyrB Shigella flexneri 2002017 Tyrosine aminotransferase YP_005729738.1 4362656 R 591020 CDS YP_005729739.1 384545675 12317782 complement(4364102..4365181) 1 NC_017328.1 alanine racemase 4365181 alr 12317782 alr Shigella flexneri 2002017 alanine racemase YP_005729739.1 4364102 R 591020 CDS YP_005729740.1 384545676 12317783 complement(4365234..4366649) 1 NC_017328.1 Replicative DNA helicase 4366649 dnaB 12317783 dnaB Shigella flexneri 2002017 Replicative DNA helicase YP_005729740.1 4365234 R 591020 CDS YP_005729741.1 384545677 12317784 4366732..4367715 1 NC_017328.1 Quinone oxidoreductase 4367715 qor 12317784 qor Shigella flexneri 2002017 Quinone oxidoreductase YP_005729741.1 4366732 D 591020 CDS YP_005729742.1 384545678 12317785 complement(4367881..4368333) 1 NC_017328.1 phage shock protein G 4368333 pspG 12317785 pspG Shigella flexneri 2002017 phage shock protein G YP_005729742.1 4367881 R 591020 CDS YP_005729743.1 384545679 12317786 complement(4368257..4369300) 1 NC_017328.1 yjbN family TIM-barrel protein 4369300 dusA 12317786 dusA Shigella flexneri 2002017 yjbN family TIM-barrel protein YP_005729743.1 4368257 R 591020 CDS YP_005729744.1 384545680 12317787 complement(4369657..4370397) 1 NC_017328.1 hypothetical protein 4370397 12317787 SFxv_4533 Shigella flexneri 2002017 hypothetical protein YP_005729744.1 4369657 R 591020 CDS YP_005729745.1 384545681 12317788 complement(4370388..4370642) 1 NC_017328.1 hypothetical protein 4370642 12317788 SFxv_4534 Shigella flexneri 2002017 hypothetical protein YP_005729745.1 4370388 R 591020 CDS YP_005729746.1 384545682 12317789 4370900..4371475 1 NC_017328.1 putative zinc uptake regulation protein 4371475 zur 12317789 zur Shigella flexneri 2002017 putative zinc uptake regulation protein YP_005729746.1 4370900 D 591020 CDS YP_005729747.1 384545683 12317790 complement(4371517..4371726) 1 NC_017328.1 putative stress-response protein 4371726 yjbJ 12317790 yjbJ Shigella flexneri 2002017 putative stress-response protein YP_005729747.1 4371517 R 591020 CDS YP_005729748.1 384545684 12317791 complement(4371842..4373221) 1 NC_017328.1 MATE efflux family protein 4373221 dinF 12317791 dinF Shigella flexneri 2002017 MATE efflux family protein YP_005729748.1 4371842 R 591020 CDS YP_005729749.1 384545685 12317792 complement(4373240..4373848) 1 NC_017328.1 LexA repressor 4373848 lexA 12317792 lexA Shigella flexneri 2002017 LexA repressor YP_005729749.1 4373240 R 591020 CDS YP_005729750.1 384545686 12317793 complement(4373958..4374326) 1 NC_017328.1 Diacylglycerol kinase 4374326 dgkA 12317793 dgkA Shigella flexneri 2002017 Diacylglycerol kinase YP_005729750.1 4373958 R 591020 CDS YP_005729751.1 384545687 12317794 4374437..4376920 1 NC_017328.1 Glycerol-3-phosphate acyltransferase 4376920 plsB 12317794 plsB Shigella flexneri 2002017 Glycerol-3-phosphate acyltransferase YP_005729751.1 4374437 D 591020 CDS YP_005729752.1 384545688 12317795 complement(4377075..4377947) 1 NC_017328.1 4-hydroxybenzoate octaprenyltransferase 4377947 ubiA 12317795 ubiA Shigella flexneri 2002017 4-hydroxybenzoate octaprenyltransferase YP_005729752.1 4377075 R 591020 CDS YP_005729753.1 384545689 12317796 complement(4377959..4378567) 1 NC_017328.1 chorismate--pyruvate lyase 4378567 ubiC 12317796 ubiC Shigella flexneri 2002017 chorismate--pyruvate lyase YP_005729753.1 4377959 R 591020 CDS YP_005729754.1 384545690 12317798 complement(4380488..4381408) 1 NC_017328.1 Periplasmic protein of mal regulon 4381408 malM 12317798 malM Shigella flexneri 2002017 Periplasmic protein of mal regulon YP_005729754.1 4380488 R 591020 CDS YP_005729755.1 384545691 12317799 complement(4381560..4382900) 1 NC_017328.1 putative Maltoporin (phage lambda and maltose receptor) 4382900 lamB 12317799 lamB Shigella flexneri 2002017 putative Maltoporin (phage lambda and maltose receptor) YP_005729755.1 4381560 R 591020 CDS YP_005729756.1 384545692 12317800 complement(4382972..4384177) 1 NC_017328.1 maltose/maltodextrin transport ATP-binding protein MalK 4384177 malK 12317800 malK Shigella flexneri 2002017 maltose/maltodextrin transport ATP-binding protein MalK YP_005729756.1 4382972 R 591020 CDS YP_005729757.1 384545693 12317801 4384452..4385642 1 NC_017328.1 Periplasmic maltose-binding protein 4385642 malE 12317801 malE Shigella flexneri 2002017 Periplasmic maltose-binding protein YP_005729757.1 4384452 D 591020 CDS YP_005729758.1 384545694 12317802 4385781..4387340 1 NC_017328.1 Maltose transport system permease protein malF 4387340 malF 12317802 malF Shigella flexneri 2002017 Maltose transport system permease protein malF YP_005729758.1 4385781 D 591020 CDS YP_005729759.1 384545695 12317803 4387355..4388245 1 NC_017328.1 Part of maltose permease, inner membrane protein 4388245 malG 12317803 malG Shigella flexneri 2002017 Part of maltose permease, inner membrane protein YP_005729759.1 4387355 D 591020 CDS YP_005729760.1 384545696 12317804 4388616..4390091 1 NC_017328.1 Xylose-proton symportor 4390091 xylE 12317804 xylE Shigella flexneri 2002017 Xylose-proton symportor YP_005729760.1 4388616 D 591020 CDS YP_005729761.1 384545697 12317805 complement(4390135..4390545) 1 NC_017328.1 Phosphate-starvation-inducible E 4390545 psiE 12317805 psiE Shigella flexneri 2002017 Phosphate-starvation-inducible E YP_005729761.1 4390135 R 591020 CDS YP_005729762.1 384545698 12317806 4390815..4391093 1 NC_017328.1 hypothetical protein 4391093 yjbT 12317806 yjbT Shigella flexneri 2002017 hypothetical protein YP_005729762.1 4390815 D 591020 CDS YP_005729763.1 384545699 12317807 complement(4390975..4391136) 1 NC_017328.1 hypothetical protein 4391136 12317807 SFxv_4553 Shigella flexneri 2002017 hypothetical protein YP_005729763.1 4390975 R 591020 CDS YP_005729764.1 384545700 12317808 complement(4391140..4393236) 1 NC_017328.1 hypothetical protein 4393236 12317808 SFxv_4554 Shigella flexneri 2002017 hypothetical protein YP_005729764.1 4391140 R 591020 CDS YP_005729765.1 384545701 12317809 complement(4393236..4393973) 1 NC_017328.1 hypothetical protein 4393973 12317809 SFxv_4555 Shigella flexneri 2002017 hypothetical protein YP_005729765.1 4393236 R 591020 CDS YP_005729766.1 384545702 12317810 complement(4393970..4394638) 1 NC_017328.1 hypothetical protein 4394638 12317810 SFxv_4556 Shigella flexneri 2002017 hypothetical protein YP_005729766.1 4393970 R 591020 CDS YP_005729767.1 384545703 12317811 complement(4395427..4397076) 1 NC_017328.1 glucose-6-phosphate isomerase 4397076 pgi 12317811 pgi Shigella flexneri 2002017 glucose-6-phosphate isomerase YP_005729767.1 4395427 R 591020 CDS YP_005729768.1 384545704 12317812 4397601..4398950 1 NC_017328.1 Aspartokinase 4398950 lysC 12317812 lysC Shigella flexneri 2002017 Aspartokinase YP_005729768.1 4397601 D 591020 CDS YP_005729769.1 384545705 12317813 complement(4400219..4401037) 1 NC_017328.1 IS600 ORF2 4401037 12317813 SFxv_4559 Shigella flexneri 2002017 IS600 ORF2 YP_005729769.1 4400219 R 591020 CDS YP_005729770.1 384545706 12317814 complement(4401427..4401984) 1 NC_017328.1 ISSfl4 ORF3 4401984 12317814 SFxv_4560 Shigella flexneri 2002017 ISSfl4 ORF3 YP_005729770.1 4401427 R 591020 CDS YP_005729771.1 384545707 12320324 complement(4401981..4402331) 1 NC_017328.1 ISSfl3 orfB 4402331 12320324 SFxv_4561 Shigella flexneri 2002017 ISSfl3 orfB YP_005729771.1 4401981 R 591020 CDS YP_005729772.1 384545708 12320325 complement(4402328..4403002) 1 NC_017328.1 ISSfl3 orfA 4403002 12320325 SFxv_4562 Shigella flexneri 2002017 ISSfl3 orfA YP_005729772.1 4402328 R 591020 CDS YP_005729773.1 384545709 12320326 4403162..4403527 1 NC_017328.1 IS2 ORF1 4403527 12320326 SFxv_4563 Shigella flexneri 2002017 IS2 ORF1 YP_005729773.1 4403162 D 591020 CDS YP_005729774.1 384545710 12320327 4403485..4404390 1 NC_017328.1 IS2 ORF2 4404390 12320327 SFxv_4564 Shigella flexneri 2002017 IS2 ORF2 YP_005729774.1 4403485 D 591020 CDS YP_005729775.1 384545711 12320328 complement(4403530..4403961) 1 NC_017328.1 putative IS2 ORF 4403961 12320328 SFxv_4566 Shigella flexneri 2002017 putative IS2 ORF YP_005729775.1 4403530 R 591020 CDS YP_005729776.1 384545712 12320329 complement(4404589..4405224) 1 NC_017328.1 RNA 2'-phosphotransferase-like protein 4405224 kptA 12320329 kptA Shigella flexneri 2002017 RNA 2'-phosphotransferase-like protein YP_005729776.1 4404589 R 591020 CDS YP_005729777.1 384545713 12320330 complement(4405202..4405393) 1 NC_017328.1 hypothetical protein 4405393 12320330 SFxv_4568 Shigella flexneri 2002017 hypothetical protein YP_005729777.1 4405202 R 591020 CDS YP_005729778.1 384545714 12320331 4405411..4406106 1 NC_017328.1 hypothetical protein 4406106 12320331 SFxv_4569 Shigella flexneri 2002017 hypothetical protein YP_005729778.1 4405411 D 591020 CDS YP_005729779.1 384545715 12320332 4406103..4406564 1 NC_017328.1 Inner membrane protein yjiG 4406564 yjiG 12320332 yjiG Shigella flexneri 2002017 Inner membrane protein yjiG YP_005729779.1 4406103 D 591020 CDS YP_005729780.1 384545716 12320333 4406577..4407749 1 NC_017328.1 Isoaspartyl dipeptidase 4407749 iadA 12320333 iadA Shigella flexneri 2002017 Isoaspartyl dipeptidase YP_005729780.1 4406577 D 591020 CDS YP_005729781.1 384545717 12320334 4407814..4408725 1 NC_017328.1 putative LYSR-type transcriptional regulator 4408725 yjiE 12320334 yjiE Shigella flexneri 2002017 putative LYSR-type transcriptional regulator YP_005729781.1 4407814 D 591020 CDS YP_005729782.1 384545718 12320335 complement(4408718..4409119) 1 NC_017328.1 hypothetical protein 4409119 12320335 SFxv_4573 Shigella flexneri 2002017 hypothetical protein YP_005729782.1 4408718 R 591020 CDS YP_005729783.1 384545719 12320336 complement(4409076..4409210) 1 NC_017328.1 hypothetical protein 4409210 12320336 SFxv_4574 Shigella flexneri 2002017 hypothetical protein YP_005729783.1 4409076 R 591020 CDS YP_005729784.1 384545720 12320337 complement(4409818..4410093) 1 NC_017328.1 IS1 orfB, A 4410093 12320337 SFxv_4576 Shigella flexneri 2002017 IS1 orfB, A YP_005729784.1 4409818 R 591020 CDS YP_005729785.1 384545721 12320338 4410013..4410237 1 NC_017328.1 putative integrase encoded by prophage CP-933K 4410237 12320338 SFxv_4575 Shigella flexneri 2002017 putative integrase encoded by prophage CP-933K YP_005729785.1 4410013 D 591020 CDS YP_005729786.1 384545722 12320339 4410560..4411390 1 NC_017328.1 hypothetical protein 4411390 12320339 SFxv_4577 Shigella flexneri 2002017 hypothetical protein YP_005729786.1 4410560 D 591020 CDS YP_005729787.1 384545723 12320340 complement(4411531..4412304) 1 NC_017328.1 Regulator for uxu operon 4412304 uxuR 12320340 uxuR Shigella flexneri 2002017 Regulator for uxu operon YP_005729787.1 4411531 R 591020 CDS YP_005729788.1 384545724 12320341 4412303..4412497 1 NC_017328.1 hypothetical protein 4412497 12320341 SFxv_4578 Shigella flexneri 2002017 hypothetical protein YP_005729788.1 4412303 D 591020 CDS YP_005729789.1 384545725 12320342 complement(4412519..4413979) 1 NC_017328.1 D-mannonate oxidoreductase 4413979 uxuB 12320342 uxuB Shigella flexneri 2002017 D-mannonate oxidoreductase YP_005729789.1 4412519 R 591020 CDS YP_005729790.1 384545726 12320343 complement(4414060..4414947) 1 NC_017328.1 mannonate dehydratase 4414947 uxuA 12320343 uxuA Shigella flexneri 2002017 mannonate dehydratase YP_005729790.1 4414060 R 591020 CDS YP_005729791.1 384545727 12320344 4415584..4416927 1 NC_017328.1 putative H+/gluconate symporter-like permease 4416927 gntP 12320344 gntP Shigella flexneri 2002017 putative H+/gluconate symporter-like permease YP_005729791.1 4415584 D 591020 CDS YP_005729792.1 384545728 12320345 complement(4417179..4418081) 1 NC_017328.1 minor fimbrial subunit, D-mannose specific adhesin 4418081 fimH 12320345 fimH Shigella flexneri 2002017 minor fimbrial subunit, D-mannose specific adhesin YP_005729792.1 4417179 R 591020 CDS YP_005729793.1 384545729 12320347 complement(4418616..4419146) 1 NC_017328.1 Minor fimbrial subunit, polypeptide 4419146 fimF 12320347 fimF Shigella flexneri 2002017 Minor fimbrial subunit, polypeptide YP_005729793.1 4418616 R 591020 CDS YP_005729794.1 384545730 12320349 4421837..4422040 1 NC_017328.1 putative integrase encoded by prophage CP-933K 4422040 12320349 SFxv_4588 Shigella flexneri 2002017 putative integrase encoded by prophage CP-933K YP_005729794.1 4421837 D 591020 CDS YP_005729795.1 384545731 12320350 complement(4422635..4423360) 1 NC_017328.1 Type I fimbrial chaperone 4423360 fimC 12320350 fimC Shigella flexneri 2002017 Type I fimbrial chaperone YP_005729795.1 4422635 R 591020 CDS YP_005729796.1 384545732 12320351 complement(4423397..4424035) 1 NC_017328.1 FimI fimbrial protein 4424035 fimI 12320351 fimI Shigella flexneri 2002017 FimI fimbrial protein YP_005729796.1 4423397 R 591020 CDS YP_005729797.1 384545733 12320352 complement(4424001..4424549) 1 NC_017328.1 Type-1 fimbrial major subunit 4424549 fimA 12320352 fimA Shigella flexneri 2002017 Type-1 fimbrial major subunit YP_005729797.1 4424001 R 591020 CDS YP_005729798.1 384545734 12320353 complement(4425030..4425626) 1 NC_017328.1 Type 1 fimbriae regulatory protein fimE 4425626 fimE 12320353 fimE Shigella flexneri 2002017 Type 1 fimbriae regulatory protein fimE YP_005729798.1 4425030 R 591020 CDS YP_005729799.1 384545735 12320354 complement(4426221..4426706) 1 NC_017328.1 Recombinase; regulator for fimA 4426706 fimB 12320354 fimB Shigella flexneri 2002017 Recombinase; regulator for fimA YP_005729799.1 4426221 R 591020 CDS YP_005729800.1 384545736 12320355 4428151..4428876 1 NC_017328.1 putative N-acetylneuraminic acid outer membrane channel protein nanC precursor 4428876 nanC 12320355 nanC Shigella flexneri 2002017 putative N-acetylneuraminic acid outer membrane channel protein nanC precursor YP_005729800.1 4428151 D 591020 CDS YP_005729801.1 384545737 12320356 4428788..4430002 1 NC_017328.1 hypothetical protein 4430002 12320356 SFxv_4595 Shigella flexneri 2002017 hypothetical protein YP_005729801.1 4428788 D 591020 CDS YP_005729802.1 384545738 12320357 4430067..4431047 1 NC_017328.1 hypothetical protein 4431047 12320357 SFxv_4596 Shigella flexneri 2002017 hypothetical protein YP_005729802.1 4430067 D 591020 CDS YP_005729803.1 384545739 12320358 complement(4431516..4432019) 1 NC_017328.1 IS1 orfB 4432019 12320358 SFxv_4597 Shigella flexneri 2002017 IS1 orfB YP_005729803.1 4431516 R 591020 CDS YP_005729804.1 384545740 12320359 4432133..4432360 1 NC_017328.1 IS600 ORF2 4432360 12320359 SFxv_4598 Shigella flexneri 2002017 IS600 ORF2 YP_005729804.1 4432133 D 591020 CDS YP_005729805.1 384545741 12320360 4432308..4433003 1 NC_017328.1 putative transcriptional regulator 4433003 12320360 SFxv_4599 Shigella flexneri 2002017 putative transcriptional regulator YP_005729805.1 4432308 D 591020 CDS YP_005729806.1 384545742 12320361 4433473..4433757 1 NC_017328.1 putative transposase ykgN 4433757 12320361 SFxv_4600 Shigella flexneri 2002017 putative transposase ykgN YP_005729806.1 4433473 D 591020 CDS YP_005729807.1 384545743 12320362 4434164..4434982 1 NC_017328.1 IS600 ORF2 4434982 12320362 SFxv_4601 Shigella flexneri 2002017 IS600 ORF2 YP_005729807.1 4434164 D 591020 CDS YP_005729808.1 384545744 12320363 4434994..4435893 1 NC_017328.1 ISEhe3, transposase orfB 4435893 12320363 SFxv_4602 Shigella flexneri 2002017 ISEhe3, transposase orfB YP_005729808.1 4434994 D 591020 CDS YP_005729809.1 384545745 12320364 complement(4436213..4436536) 1 NC_017328.1 IS600 ORF2 4436536 12320364 SFxv_4603 Shigella flexneri 2002017 IS600 ORF2 YP_005729809.1 4436213 R 591020 CDS YP_005729810.1 384545746 12320365 4436718..4437113 1 NC_017328.1 IS1 orfB 4437113 12320365 SFxv_4604 Shigella flexneri 2002017 IS1 orfB YP_005729810.1 4436718 D 591020 CDS YP_005729811.1 384545747 12320366 4438115..4438474 1 NC_017328.1 IS911 orfA 4438474 12320366 SFxv_4605 Shigella flexneri 2002017 IS911 orfA YP_005729811.1 4438115 D 591020 CDS YP_005729812.1 384545748 12320367 complement(4438449..4439660) 1 NC_017328.1 putative P4-type integrase 4439660 12320367 SFxv_4606 Shigella flexneri 2002017 putative P4-type integrase YP_005729812.1 4438449 R 591020 CDS YP_005729813.1 384545749 12320369 4440097..4441158 1 NC_017328.1 putative Zn-dependent alcohol dehydrogenase 4441158 12320369 SFxv_4607 Shigella flexneri 2002017 putative Zn-dependent alcohol dehydrogenase YP_005729813.1 4440097 D 591020 CDS YP_005729814.1 384545750 12320370 4441239..4442789 1 NC_017328.1 hypothetical protein 4442789 12320370 SFxv_4608 Shigella flexneri 2002017 hypothetical protein YP_005729814.1 4441239 D 591020 CDS YP_005729815.1 384545751 12320371 complement(4442908..4443993) 1 NC_017328.1 Inner membrane protein yjgQ 4443993 yjgQ 12320371 yjgQ Shigella flexneri 2002017 Inner membrane protein yjgQ YP_005729815.1 4442908 R 591020 CDS YP_005729816.1 384545752 12320372 complement(4443990..4445090) 1 NC_017328.1 hypothetical protein 4445090 12320372 SFxv_4611 Shigella flexneri 2002017 hypothetical protein YP_005729816.1 4443990 R 591020 CDS YP_005729817.1 384545753 12320373 4445004..4445132 1 NC_017328.1 hypothetical protein 4445132 12320373 SFxv_4610 Shigella flexneri 2002017 hypothetical protein YP_005729817.1 4445004 D 591020 CDS YP_005729818.1 384545754 12320374 4445357..4446868 1 NC_017328.1 putative cytosol aminopeptidase 4446868 pepA 12320374 pepA Shigella flexneri 2002017 putative cytosol aminopeptidase YP_005729818.1 4445357 D 591020 CDS YP_005729819.1 384545755 12320375 4446963..4447445 1 NC_017328.1 DNA polymerase III subunit chi 4447445 holC 12320375 holC Shigella flexneri 2002017 DNA polymerase III subunit chi YP_005729819.1 4446963 D 591020 CDS YP_005729820.1 384545756 12320376 4447445..4450300 1 NC_017328.1 valyl-tRNA synthetase 4450300 valS 12320376 valS Shigella flexneri 2002017 valyl-tRNA synthetase YP_005729820.1 4447445 D 591020 CDS YP_005729821.1 384545757 12320378 complement(4450354..4451550) 1 NC_017328.1 hypothetical protein 4451550 12320378 SFxv_4615 Shigella flexneri 2002017 hypothetical protein YP_005729821.1 4450354 R 591020 CDS YP_005729822.1 384545758 12320379 4451743..4452246 1 NC_017328.1 putative acetyltransferase yjgM 4452246 yjgM 12320379 yjgM Shigella flexneri 2002017 putative acetyltransferase yjgM YP_005729822.1 4451743 D 591020 CDS YP_005729823.1 384545759 12320380 complement(4452292..4452708) 1 NC_017328.1 hypothetical protein 4452708 12320380 SFxv_4617 Shigella flexneri 2002017 hypothetical protein YP_005729823.1 4452292 R 591020 CDS YP_005729824.1 384545760 12320381 4452870..4453883 1 NC_017328.1 ornithine carbamoyltransferase 4453883 argI 12320381 argI Shigella flexneri 2002017 ornithine carbamoyltransferase YP_005729824.1 4452870 D 591020 CDS YP_005729825.1 384545761 12320382 4454149..4454652 1 NC_017328.1 IS1 ORF2 4454652 12320382 SFxv_4619 Shigella flexneri 2002017 IS1 ORF2 YP_005729825.1 4454149 D 591020 CDS YP_005729826.1 384545762 12320383 complement(4454663..4455391) 1 NC_017328.1 hypothetical protein 4455391 12320383 SFxv_4620 Shigella flexneri 2002017 hypothetical protein YP_005729826.1 4454663 R 591020 CDS YP_005729827.1 384545763 12320384 complement(4455513..4455974) 1 NC_017328.1 putative Beta-galactosidase, beta subunit 4455974 yjgK 12320384 yjgK Shigella flexneri 2002017 putative Beta-galactosidase, beta subunit YP_005729827.1 4455513 R 591020 CDS YP_005729828.1 384545764 12320385 complement(4456110..4456703) 1 NC_017328.1 TetR family transcriptional regulator 4456703 yjgJ 12320385 yjgJ Shigella flexneri 2002017 TetR family transcriptional regulator YP_005729828.1 4456110 R 591020 CDS YP_005729829.1 384545765 12320386 4456774..4457487 1 NC_017328.1 putative oxidoreductase 4457487 yjgI 12320386 yjgI Shigella flexneri 2002017 putative oxidoreductase YP_005729829.1 4456774 D 591020 CDS YP_005729830.1 384545766 12320387 4457535..4458014 1 NC_017328.1 endoribonuclease L-PSP family protein 4458014 yjgH 12320387 yjgH Shigella flexneri 2002017 endoribonuclease L-PSP family protein YP_005729830.1 4457535 D 591020 CDS YP_005729831.1 384545767 12320388 complement(4457983..4458315) 1 NC_017328.1 hypothetical protein 4458315 12320388 SFxv_4627 Shigella flexneri 2002017 hypothetical protein YP_005729831.1 4457983 R 591020 CDS YP_005729832.1 384545768 12320389 4458295..4458429 1 NC_017328.1 PyrBI operon leader peptide 4458429 pyrL 12320389 pyrL Shigella flexneri 2002017 PyrBI operon leader peptide YP_005729832.1 4458295 D 591020 CDS YP_005729833.1 384545769 12320390 4458433..4459368 1 NC_017328.1 Aspartate carbamoyltransferase catalytic chain 4459368 pyrB 12320390 pyrB Shigella flexneri 2002017 Aspartate carbamoyltransferase catalytic chain YP_005729833.1 4458433 D 591020 CDS YP_005729834.1 384545770 12320391 4459381..4459842 1 NC_017328.1 Aspartate carbamoyltransferase regulatory chain 4459842 pyrI 12320391 pyrI Shigella flexneri 2002017 Aspartate carbamoyltransferase regulatory chain YP_005729834.1 4459381 D 591020 CDS YP_005729835.1 384545771 12320392 4459876..4460301 1 NC_017328.1 hypothetical protein 4460301 12320392 SFxv_4630 Shigella flexneri 2002017 hypothetical protein YP_005729835.1 4459876 D 591020 CDS YP_005729836.1 384545772 12320393 complement(4460507..4463203) 1 NC_017328.1 Mg2+ transport ATPase, P-type 1 4463203 mgtA 12320393 mgtA Shigella flexneri 2002017 Mg2+ transport ATPase, P-type 1 YP_005729836.1 4460507 R 591020 CDS YP_005729837.1 384545773 12320394 4463582..4464529 1 NC_017328.1 Repressor of treA,B,C 4464529 treR 12320394 treR Shigella flexneri 2002017 Repressor of treA,B,C YP_005729837.1 4463582 D 591020 CDS YP_005729838.1 384545774 12320396 4465973..4467775 1 NC_017328.1 Trehalase 6-P hydrolase 4467775 treC 12320396 treC Shigella flexneri 2002017 Trehalase 6-P hydrolase YP_005729838.1 4465973 D 591020 CDS YP_005729839.1 384545775 12320397 complement(4467848..4467964) 1 NC_017328.1 hypothetical protein 4467964 12320397 SFxv_4635 Shigella flexneri 2002017 hypothetical protein YP_005729839.1 4467848 R 591020 CDS YP_005729840.1 384545776 12320398 4468169..4470307 1 NC_017328.1 Anaerobic ribonucleoside-triphosphate reductase 4470307 nrdD 12320398 nrdD Shigella flexneri 2002017 Anaerobic ribonucleoside-triphosphate reductase YP_005729840.1 4468169 D 591020 CDS YP_005729841.1 384545777 12320399 4470465..4470929 1 NC_017328.1 Anaerobic ribonucleotide reductase activating protein 4470929 nrdG 12320399 nrdG Shigella flexneri 2002017 Anaerobic ribonucleotide reductase activating protein YP_005729841.1 4470465 D 591020 CDS YP_005729842.1 384545778 12320400 complement(4471539..4472891) 1 NC_017328.1 putative peptide maturation protein 4472891 pmbA 12320400 pmbA Shigella flexneri 2002017 putative peptide maturation protein YP_005729842.1 4471539 R 591020 CDS YP_005729843.1 384545779 12320401 4472985..4473536 1 NC_017328.1 hypothetical protein 4473536 12320401 SFxv_4640 Shigella flexneri 2002017 hypothetical protein YP_005729843.1 4472985 D 591020 CDS YP_005729844.1 384545780 12320402 complement(4473619..4474992) 1 NC_017328.1 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 4474992 mpl 12320402 mpl Shigella flexneri 2002017 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase YP_005729844.1 4473619 R 591020 CDS YP_005729845.1 384545781 12320403 complement(4474974..4475105) 1 NC_017328.1 hypothetical protein 4475105 12320403 SFxv_4642 Shigella flexneri 2002017 hypothetical protein YP_005729845.1 4474974 R 591020 CDS YP_005729846.1 384545782 12320404 4475168..4476166 1 NC_017328.1 Fructose-1,6-bisphosphatase 4476166 fbp 12320404 fbp Shigella flexneri 2002017 Fructose-1,6-bisphosphatase YP_005729846.1 4475168 D 591020 CDS YP_005729847.1 384545783 12320405 complement(4476204..4477550) 1 NC_017328.1 IS4 ORF 4477550 12320405 SFxv_4644 Shigella flexneri 2002017 IS4 ORF YP_005729847.1 4476204 R 591020 CDS YP_005729848.1 384545784 12320407 complement(4478803..4479645) 1 NC_017328.1 ABC transporter permease protein ytfT 4479645 ytfT 12320407 ytfT Shigella flexneri 2002017 ABC transporter permease protein ytfT YP_005729848.1 4478803 R 591020 CDS YP_005729849.1 384545785 12320408 complement(4479656..4481158) 1 NC_017328.1 ATPase 4481158 ytfR 12320408 ytfR Shigella flexneri 2002017 ATPase YP_005729849.1 4479656 R 591020 CDS YP_005729850.1 384545786 12320410 4482564..4483094 1 NC_017328.1 inorganic pyrophosphatase 4483094 ppa 12320410 ppa Shigella flexneri 2002017 inorganic pyrophosphatase YP_005729850.1 4482564 D 591020 CDS YP_005729851.1 384545787 12320411 complement(4483474..4483815) 1 NC_017328.1 hypothetical protein 4483815 12320411 SFxv_4652 Shigella flexneri 2002017 hypothetical protein YP_005729851.1 4483474 R 591020 CDS YP_005729852.1 384545788 12320412 complement(4483818..4487597) 1 NC_017328.1 hypothetical protein 4487597 12320412 SFxv_4653 Shigella flexneri 2002017 hypothetical protein YP_005729852.1 4483818 R 591020 CDS YP_005729853.1 384545789 12320413 complement(4487594..4489327) 1 NC_017328.1 putative Outer membrane protein 4489327 ytfM 12320413 ytfM Shigella flexneri 2002017 putative Outer membrane protein YP_005729853.1 4487594 R 591020 CDS YP_005729854.1 384545790 12320414 4489533..4490171 1 NC_017328.1 Peptide methionine sulfoxide reductase msrA 4490171 msrA 12320414 msrA Shigella flexneri 2002017 Peptide methionine sulfoxide reductase msrA YP_005729854.1 4489533 D 591020 CDS YP_005729855.1 384545791 12320415 4490494..4491837 1 NC_017328.1 putative transport protein 4491837 ytfL 12320415 ytfL Shigella flexneri 2002017 putative transport protein YP_005729855.1 4490494 D 591020 CDS YP_005729856.1 384545792 12320416 complement(4491899..4492144) 1 NC_017328.1 hypothetical protein 4492144 12320416 SFxv_4658 Shigella flexneri 2002017 hypothetical protein YP_005729856.1 4491899 R 591020 CDS YP_005729857.1 384545793 12320417 4492429..4492983 1 NC_017328.1 hypothetical protein 4492983 12320417 SFxv_4659 Shigella flexneri 2002017 hypothetical protein YP_005729857.1 4492429 D 591020 CDS YP_005729858.1 384545794 12320418 complement(4493046..4493984) 1 NC_017328.1 hypothetical protein 4493984 12320418 SFxv_4660 Shigella flexneri 2002017 hypothetical protein YP_005729858.1 4493046 R 591020 CDS YP_005729859.1 384545795 12320419 complement(4494196..4494936) 1 NC_017328.1 3'(2'),5'-bisphosphate nucleotidase 4494936 cysQ 12320419 cysQ Shigella flexneri 2002017 3'(2'),5'-bisphosphate nucleotidase YP_005729859.1 4494196 R 591020 CDS YP_005729860.1 384545796 12320420 4495126..4497069 1 NC_017328.1 2:3-cyclic-nucleotide 2-phosphodiesterase 4497069 cpdB 12320420 cpdB Shigella flexneri 2002017 2:3-cyclic-nucleotide 2-phosphodiesterase YP_005729860.1 4495126 D 591020 CDS YP_005729861.1 384545797 12320421 complement(4497195..4497686) 1 NC_017328.1 HxlR family transcriptional regulator 4497686 ytfH 12320421 ytfH Shigella flexneri 2002017 HxlR family transcriptional regulator YP_005729861.1 4497195 R 591020 CDS YP_005729862.1 384545798 12320422 4497664..4498524 1 NC_017328.1 putative oxidoreductase 4498524 ytfG 12320422 ytfG Shigella flexneri 2002017 putative oxidoreductase YP_005729862.1 4497664 D 591020 CDS YP_005729863.1 384545799 12320423 4498624..4499598 1 NC_017328.1 putative transmembrane subunit 4499598 ytfF 12320423 ytfF Shigella flexneri 2002017 putative transmembrane subunit YP_005729863.1 4498624 D 591020 CDS YP_005729864.1 384545800 12320424 4499706..4500368 1 NC_017328.1 Regulator of cell morphogenesis and NO signaling 4500368 ytfE 12320424 ytfE Shigella flexneri 2002017 Regulator of cell morphogenesis and NO signaling YP_005729864.1 4499706 D 591020 CDS YP_005729865.1 384545801 12320425 complement(4500413..4501825) 1 NC_017328.1 Transport protein for D-alanine, D-serine, and glycine 4501825 cycA 12320425 cycA Shigella flexneri 2002017 Transport protein for D-alanine, D-serine, and glycine YP_005729865.1 4500413 R 591020 CDS YP_005729866.1 384545802 12320426 complement(4502133..4502753) 1 NC_017328.1 peptidyl-prolyl cis-trans isomerase 4502753 fklB 12320426 fklB Shigella flexneri 2002017 peptidyl-prolyl cis-trans isomerase YP_005729866.1 4502133 R 591020 CDS YP_005729867.1 384545803 12320427 4502936..4503517 1 NC_017328.1 hypothetical protein 4503517 12320427 SFxv_4669 Shigella flexneri 2002017 hypothetical protein YP_005729867.1 4502936 D 591020 CDS YP_005729868.1 384545804 12320428 complement(4503501..4504148) 1 NC_017328.1 TetR family transcriptional regulator 4504148 12320428 SFxv_4670 Shigella flexneri 2002017 TetR family transcriptional regulator YP_005729868.1 4503501 R 591020 CDS YP_005729869.1 384545805 12320429 4504255..4505151 1 NC_017328.1 3-ketoacyl-ACP reductase 4505151 12320429 SFxv_4671 Shigella flexneri 2002017 3-ketoacyl-ACP reductase YP_005729869.1 4504255 D 591020 CDS YP_005729870.1 384545806 12320430 4505161..4506045 1 NC_017328.1 hypothetical protein 4506045 12320430 SFxv_4672 Shigella flexneri 2002017 hypothetical protein YP_005729870.1 4505161 D 591020 CDS YP_005729871.1 384545807 12320431 complement(4505980..4506483) 1 NC_017328.1 IS1 ORF2 4506483 12320431 SFxv_4673 Shigella flexneri 2002017 IS1 ORF2 YP_005729871.1 4505980 R 591020 CDS YP_005729872.1 384545808 12320432 4507365..4507553 1 NC_017328.1 IS600 ORF2 4507553 12320432 SFxv_4674 Shigella flexneri 2002017 IS600 ORF2 YP_005729872.1 4507365 D 591020 CDS YP_005729873.1 384545809 12320433 complement(4507594..4508646) 1 NC_017328.1 putative cadaverine/lysine antiporter 4508646 12320433 SFxv_4675 Shigella flexneri 2002017 putative cadaverine/lysine antiporter YP_005729873.1 4507594 R 591020 CDS YP_005729874.1 384545810 12320434 complement(4508686..4508940) 1 NC_017328.1 putative IS1 encoded protein 4508940 12320434 SFxv_4676 Shigella flexneri 2002017 putative IS1 encoded protein YP_005729874.1 4508686 R 591020 CDS YP_005729875.1 384545811 12320435 4509015..4509518 1 NC_017328.1 IS1 ORF2 4509518 12320435 SFxv_4677 Shigella flexneri 2002017 IS1 ORF2 YP_005729875.1 4509015 D 591020 CDS YP_005729876.1 384545812 12320437 complement(4510063..4510662) 1 NC_017328.1 HTH-type transcriptional regulator yjdC 4510662 yjdC 12320437 yjdC Shigella flexneri 2002017 HTH-type transcriptional regulator yjdC YP_005729876.1 4510063 R 591020 CDS YP_005729877.1 384545813 12320438 complement(4510675..4512372) 1 NC_017328.1 Thiol:disulfide interchange protein 4512372 dipZ 12320438 dipZ Shigella flexneri 2002017 Thiol:disulfide interchange protein YP_005729877.1 4510675 R 591020 CDS YP_005729878.1 384545814 12320439 complement(4512348..4512686) 1 NC_017328.1 Divalent-cation tolerance protein cutA 4512686 cutA 12320439 cutA Shigella flexneri 2002017 Divalent-cation tolerance protein cutA YP_005729878.1 4512348 R 591020 CDS YP_005729879.1 384545815 12320440 complement(4512802..4514010) 1 NC_017328.1 Anaerobic C4-dicarboxylate transporter dcuA 4514010 dcuA 12320440 dcuA Shigella flexneri 2002017 Anaerobic C4-dicarboxylate transporter dcuA YP_005729879.1 4512802 R 591020 CDS YP_005729880.1 384545816 12320441 complement(4514221..4515702) 1 NC_017328.1 Aspartate ammonia-lyase 4515702 aspA 12320441 aspA Shigella flexneri 2002017 Aspartate ammonia-lyase YP_005729880.1 4514221 R 591020 CDS YP_005729881.1 384545817 12320442 4515994..4516470 1 NC_017328.1 FxsA protein 4516470 fxsA 12320442 fxsA Shigella flexneri 2002017 FxsA protein YP_005729881.1 4515994 D 591020 CDS YP_005729882.1 384545818 12320443 complement(4516486..4517742) 1 NC_017328.1 putative Amino acid transporter 4517742 yjeH 12320443 yjeH Shigella flexneri 2002017 putative Amino acid transporter YP_005729882.1 4516486 R 591020 CDS YP_005729883.1 384545819 12320444 4518018..4518311 1 NC_017328.1 chaperonin 4518311 groS 12320444 groS Shigella flexneri 2002017 chaperonin YP_005729883.1 4518018 D 591020 CDS YP_005729884.1 384545820 12320446 4518355..4520001 1 NC_017328.1 chaperonin 4520001 groL 12320446 groL Shigella flexneri 2002017 chaperonin YP_005729884.1 4518355 D 591020 CDS YP_005729885.1 384545821 12320447 4520106..4520492 1 NC_017328.1 hypothetical protein 4520492 yjeI 12320447 yjeI Shigella flexneri 2002017 hypothetical protein YP_005729885.1 4520106 D 591020 CDS YP_005729886.1 384545822 12320448 complement(4520695..4521564) 1 NC_017328.1 hypothetical protein 4521564 12320448 SFxv_4688 Shigella flexneri 2002017 hypothetical protein YP_005729886.1 4520695 R 591020 CDS YP_005729887.1 384545823 12320449 complement(4521591..4521869) 1 NC_017328.1 putative IS1 encoded protein 4521869 12320449 SFxv_4689 Shigella flexneri 2002017 putative IS1 encoded protein YP_005729887.1 4521591 R 591020 CDS YP_005729888.1 384545824 12320450 4521944..4522447 1 NC_017328.1 IS1 orfB 4522447 12320450 SFxv_4690 Shigella flexneri 2002017 IS1 orfB YP_005729888.1 4521944 D 591020 CDS YP_005729889.1 384545825 12320451 complement(4522726..4523754) 1 NC_017328.1 KamA family protein 4523754 yjeK 12320451 yjeK Shigella flexneri 2002017 KamA family protein YP_005729889.1 4522726 R 591020 CDS YP_005729890.1 384545826 12320452 4523796..4524362 1 NC_017328.1 elongation factor P 4524362 efp 12320452 efp Shigella flexneri 2002017 elongation factor P YP_005729890.1 4523796 D 591020 CDS YP_005729891.1 384545827 12320453 4524650..4524796 1 NC_017328.1 Entericidin B 4524796 ecnB 12320453 ecnB Shigella flexneri 2002017 Entericidin B YP_005729891.1 4524650 D 591020 CDS YP_005729892.1 384545828 12320454 4524822..4525289 1 NC_017328.1 Suppresses groEL, may be chaperone 4525289 sugE 12320454 sugE Shigella flexneri 2002017 Suppresses groEL, may be chaperone YP_005729892.1 4524822 D 591020 CDS YP_005729893.1 384545829 12320455 complement(4525286..4525819) 1 NC_017328.1 Outer membrane lipoprotein 4525819 blc 12320455 blc Shigella flexneri 2002017 Outer membrane lipoprotein YP_005729893.1 4525286 R 591020 CDS YP_005729894.1 384545830 12320456 complement(4525907..4527073) 1 NC_017328.1 Beta-lactamase; penicillin resistance 4527073 ampC 12320456 ampC Shigella flexneri 2002017 Beta-lactamase; penicillin resistance YP_005729894.1 4525907 R 591020 CDS YP_005729895.1 384545831 12320457 complement(4527103..4527462) 1 NC_017328.1 Fumarate reductase subunit D 4527462 frdD 12320457 frdD Shigella flexneri 2002017 Fumarate reductase subunit D YP_005729895.1 4527103 R 591020 CDS YP_005729896.1 384545832 12320458 complement(4527473..4527868) 1 NC_017328.1 Fumarate reductase subunit C 4527868 frdC 12320458 frdC Shigella flexneri 2002017 Fumarate reductase subunit C YP_005729896.1 4527473 R 591020 CDS YP_005729897.1 384545833 12320459 complement(4527879..4528613) 1 NC_017328.1 Fumarate reductase iron-sulfur subunit 4528613 frdB 12320459 frdB Shigella flexneri 2002017 Fumarate reductase iron-sulfur subunit YP_005729897.1 4527879 R 591020 CDS YP_005729898.1 384545834 12320460 complement(4528606..4530414) 1 NC_017328.1 Fumarate reductase, anaerobic, flavoprotein subunit 4530414 frdA 12320460 frdA Shigella flexneri 2002017 Fumarate reductase, anaerobic, flavoprotein subunit YP_005729898.1 4528606 R 591020 CDS YP_005729899.1 384545835 12320461 4530739..4531716 1 NC_017328.1 putative lysyl-tRNA synthetase 4531716 poxA 12320461 poxA Shigella flexneri 2002017 putative lysyl-tRNA synthetase YP_005729899.1 4530739 D 591020 CDS YP_005729900.1 384545836 12320463 4532700..4532843 1 NC_017328.1 IS600 ORF2 4532843 12320463 SFxv_4703 Shigella flexneri 2002017 IS600 ORF2 YP_005729900.1 4532700 D 591020 CDS YP_005729901.1 384545837 12320465 complement(4534321..4537632) 1 NC_017328.1 putative periplasmic binding protein 4537632 yjeP 12320465 yjeP Shigella flexneri 2002017 putative periplasmic binding protein YP_005729901.1 4534321 R 591020 CDS YP_005729902.1 384545838 12320466 complement(4537654..4538622) 1 NC_017328.1 phosphatidylserine decarboxylase 4538622 psd 12320466 psd Shigella flexneri 2002017 phosphatidylserine decarboxylase YP_005729902.1 4537654 R 591020 CDS YP_005729903.1 384545839 12320467 complement(4538719..4539771) 1 NC_017328.1 putative GTPase engC precursor 4539771 rsgA 12320467 rsgA Shigella flexneri 2002017 putative GTPase engC precursor YP_005729903.1 4538719 R 591020 CDS YP_005729904.1 384545840 12320468 4539797..4540411 1 NC_017328.1 oligoribonuclease 4540411 orn 12320468 orn Shigella flexneri 2002017 oligoribonuclease YP_005729904.1 4539797 D 591020 CDS YP_005729905.1 384545841 12320473 complement(4541420..4542604) 1 NC_017328.1 putative electron transport protein yjeS 4542604 yjeS 12320473 yjeS Shigella flexneri 2002017 putative electron transport protein yjeS YP_005729905.1 4541420 R 591020 CDS YP_005729906.1 384545842 12320474 4542558..4544105 1 NC_017328.1 hypothetical protein 4544105 12320474 SFxv_4710 Shigella flexneri 2002017 hypothetical protein YP_005729906.1 4542558 D 591020 CDS YP_005729907.1 384545843 12320475 4544077..4544538 1 NC_017328.1 ATP-binding protein yjeE 4544538 yjeE 12320475 yjeE Shigella flexneri 2002017 ATP-binding protein yjeE YP_005729907.1 4544077 D 591020 CDS YP_005729908.1 384545844 12320476 4544557..4545894 1 NC_017328.1 N-acetylmuramoyl-l-alanine amidase II, murein hydrolase 4545894 amiB 12320476 amiB Shigella flexneri 2002017 N-acetylmuramoyl-l-alanine amidase II, murein hydrolase YP_005729908.1 4544557 D 591020 CDS YP_005729909.1 384545845 12320477 4545904..4547751 1 NC_017328.1 DNA mismatch repair protein mutL 4547751 mutL 12320477 mutL Shigella flexneri 2002017 DNA mismatch repair protein mutL YP_005729909.1 4545904 D 591020 CDS YP_005729910.1 384545846 12320479 4547744..4548694 1 NC_017328.1 tRNA delta(2)-isopentenylpyrophosphate transferase 4548694 miaA 12320479 miaA Shigella flexneri 2002017 tRNA delta(2)-isopentenylpyrophosphate transferase YP_005729910.1 4547744 D 591020 CDS YP_005729911.1 384545847 12320481 4548780..4549088 1 NC_017328.1 RNA-binding protein Hfq 4549088 hfq 12320481 hfq Shigella flexneri 2002017 RNA-binding protein Hfq YP_005729911.1 4548780 D 591020 CDS YP_005729912.1 384545848 12320483 4549164..4550444 1 NC_017328.1 GTP-binding subunit of protease specific for phage lambda cII repressor 4550444 hflX 12320483 hflX Shigella flexneri 2002017 GTP-binding subunit of protease specific for phage lambda cII repressor YP_005729912.1 4549164 D 591020 CDS YP_005729913.1 384545849 12320485 4550530..4551789 1 NC_017328.1 Protease specific for phage lambda cII repressor 4551789 hflK 12320485 hflK Shigella flexneri 2002017 Protease specific for phage lambda cII repressor YP_005729913.1 4550530 D 591020 CDS YP_005729914.1 384545850 12320486 4551792..4552796 1 NC_017328.1 Protease specific for phage lambda cII repressor 4552796 hflC 12320486 hflC Shigella flexneri 2002017 Protease specific for phage lambda cII repressor YP_005729914.1 4551792 D 591020 CDS YP_005729915.1 384545851 12320487 4552878..4553075 1 NC_017328.1 putative membrane protein YjeT 4553075 yjeT 12320487 yjeT Shigella flexneri 2002017 putative membrane protein YjeT YP_005729915.1 4552878 D 591020 CDS YP_005729916.1 384545852 12320488 4553179..4554477 1 NC_017328.1 adenylosuccinate synthetase 4554477 purA 12320488 purA Shigella flexneri 2002017 adenylosuccinate synthetase YP_005729916.1 4553179 D 591020 CDS YP_005729917.1 384545853 12320489 4554682..4555107 1 NC_017328.1 HTH-type transcriptional repressor nsrR 4555107 nsrR 12320489 nsrR Shigella flexneri 2002017 HTH-type transcriptional repressor nsrR YP_005729917.1 4554682 D 591020 CDS YP_005729918.1 384545854 12320490 4555146..4557587 1 NC_017328.1 putative Exoribonuclease R 4557587 rnr 12320490 rnr Shigella flexneri 2002017 putative Exoribonuclease R YP_005729918.1 4555146 D 591020 CDS YP_005729919.1 384545855 12320491 4557767..4558498 1 NC_017328.1 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB 4558498 rlmB 12320491 rlmB Shigella flexneri 2002017 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB YP_005729919.1 4557767 D 591020 CDS YP_005729920.1 384545856 12320492 complement(4558509..4558718) 1 NC_017328.1 IS600 ORF2 4558718 12320492 SFxv_4725 Shigella flexneri 2002017 IS600 ORF2 YP_005729920.1 4558509 R 591020 CDS YP_005729921.1 384545857 12320493 4558793..4559296 1 NC_017328.1 IS1 ORF2 4559296 12320493 SFxv_4726 Shigella flexneri 2002017 IS1 ORF2 YP_005729921.1 4558793 D 591020 CDS YP_005729922.1 384545858 12320494 4559298..4559552 1 NC_017328.1 Inner membrane protein yjfL 4559552 yjfL 12320494 yjfL Shigella flexneri 2002017 Inner membrane protein yjfL YP_005729922.1 4559298 D 591020 CDS YP_005729923.1 384545859 12320495 4559562..4560200 1 NC_017328.1 hypothetical protein 4560200 yjfM 12320495 yjfM Shigella flexneri 2002017 hypothetical protein YP_005729923.1 4559562 D 591020 CDS YP_005729924.1 384545860 12320496 4560203..4561366 1 NC_017328.1 Glutathionylspermidine synthase domain protein 4561366 yjfC 12320496 yjfC Shigella flexneri 2002017 Glutathionylspermidine synthase domain protein YP_005729924.1 4560203 D 591020 CDS YP_005729925.1 384545861 12320498 complement(4562749..4563252) 1 NC_017328.1 IS1 orfB 4563252 12320498 SFxv_4731 Shigella flexneri 2002017 IS1 orfB YP_005729925.1 4562749 R 591020 CDS YP_005729926.1 384545862 12320499 4563366..4563548 1 NC_017328.1 putative integrase encoded by prophage CP-933K 4563548 12320499 SFxv_4732 Shigella flexneri 2002017 putative integrase encoded by prophage CP-933K YP_005729926.1 4563366 D 591020 CDS YP_005729927.1 384545863 12320500 complement(4563969..4564271) 1 NC_017328.1 hypothetical protein 4564271 12320500 SFxv_4734 Shigella flexneri 2002017 hypothetical protein YP_005729927.1 4563969 R 591020 CDS YP_005729928.1 384545864 12320501 complement(4564393..4564821) 1 NC_017328.1 hypothetical protein 4564821 12320501 SFxv_4735 Shigella flexneri 2002017 hypothetical protein YP_005729928.1 4564393 R 591020 CDS YP_005729929.1 384545865 12320502 4564904..4565653 1 NC_017328.1 Phospholipase/carboxylesterase 4565653 yjfP 12320502 yjfP Shigella flexneri 2002017 Phospholipase/carboxylesterase YP_005729929.1 4564904 D 591020 CDS YP_005729930.1 384545866 12320503 complement(4565650..4566405) 1 NC_017328.1 HTH-type transcriptional regulator ulaR 4566405 ulaR 12320503 ulaR Shigella flexneri 2002017 HTH-type transcriptional regulator ulaR YP_005729930.1 4565650 R 591020 CDS YP_005729931.1 384545867 12320504 complement(4566513..4567583) 1 NC_017328.1 putative Zn-dependent hydrolase of the beta-lactamase fold family 4567583 ulaG 12320504 ulaG Shigella flexneri 2002017 putative Zn-dependent hydrolase of the beta-lactamase fold family YP_005729931.1 4566513 R 591020 CDS YP_005729932.1 384545868 12320505 4567875..4569329 1 NC_017328.1 Ascorbate-specific permease IIC component ulaA 4569329 ulaA 12320505 ulaA Shigella flexneri 2002017 Ascorbate-specific permease IIC component ulaA YP_005729932.1 4567875 D 591020 CDS YP_005729933.1 384545869 12320506 4569345..4569650 1 NC_017328.1 Ascorbate-specific phosphotransferase enzyme IIB component 4569650 ulaB 12320506 ulaB Shigella flexneri 2002017 Ascorbate-specific phosphotransferase enzyme IIB component YP_005729933.1 4569345 D 591020 CDS YP_005729934.1 384545870 12320507 4569660..4570124 1 NC_017328.1 Ascorbate-specific phosphotransferase enzyme IIA component 4570124 ulaC 12320507 ulaC Shigella flexneri 2002017 Ascorbate-specific phosphotransferase enzyme IIA component YP_005729934.1 4569660 D 591020 CDS YP_005729935.1 384545871 12320508 4570138..4570788 1 NC_017328.1 3-keto-L-gulonate-6-phosphate decarboxylase ulaD 4570788 ulaD 12320508 ulaD Shigella flexneri 2002017 3-keto-L-gulonate-6-phosphate decarboxylase ulaD YP_005729935.1 4570138 D 591020 CDS YP_005729936.1 384545872 12320509 4570798..4571652 1 NC_017328.1 L-ribulose-5-phosphate 3-epimerase ulaE 4571652 ulaE 12320509 ulaE Shigella flexneri 2002017 L-ribulose-5-phosphate 3-epimerase ulaE YP_005729936.1 4570798 D 591020 CDS YP_005729937.1 384545873 12320510 4571652..4572338 1 NC_017328.1 L-ribulose-5-phosphate 4-epimerase ulaF 4572338 ulaF 12320510 ulaF Shigella flexneri 2002017 L-ribulose-5-phosphate 4-epimerase ulaF YP_005729937.1 4571652 D 591020 CDS YP_005729938.1 384545874 12320511 complement(4572467..4572742) 1 NC_017328.1 hypothetical protein 4572742 12320511 SFxv_4745 Shigella flexneri 2002017 hypothetical protein YP_005729938.1 4572467 R 591020 CDS YP_005729939.1 384545875 12320512 4573092..4573463 1 NC_017328.1 30S ribosomal protein S6 4573463 rpsF 12320512 rpsF Shigella flexneri 2002017 30S ribosomal protein S6 YP_005729939.1 4573092 D 591020 CDS YP_005729940.1 384545876 12320513 4573470..4573784 1 NC_017328.1 primosomal replication protein n 4573784 priB 12320513 priB Shigella flexneri 2002017 primosomal replication protein n YP_005729940.1 4573470 D 591020 CDS YP_005729941.1 384545877 12320514 complement(4573699..4574031) 1 NC_017328.1 hypothetical protein 4574031 12320514 SFxv_4749 Shigella flexneri 2002017 hypothetical protein YP_005729941.1 4573699 R 591020 CDS YP_005729942.1 384545878 12320515 4573789..4574016 1 NC_017328.1 30S ribosomal protein S18 4574016 rpsR 12320515 rpsR Shigella flexneri 2002017 30S ribosomal protein S18 YP_005729942.1 4573789 D 591020 CDS YP_005729943.1 384545879 12320516 4574058..4574507 1 NC_017328.1 50S ribosomal protein L9 4574507 rplI 12320516 rplI Shigella flexneri 2002017 50S ribosomal protein L9 YP_005729943.1 4574058 D 591020 CDS YP_005729944.1 384545880 12320517 complement(4574578..4575135) 1 NC_017328.1 hypothetical protein 4575135 12320517 SFxv_4751 Shigella flexneri 2002017 hypothetical protein YP_005729944.1 4574578 R 591020 CDS YP_005729945.1 384545881 12320518 4575199..4575483 1 NC_017328.1 Transposase IS3/IS911 family protein 4575483 12320518 SFxv_4752 Shigella flexneri 2002017 Transposase IS3/IS911 family protein YP_005729945.1 4575199 D 591020 CDS YP_005729946.1 384545882 12320519 4575540..4576121 1 NC_017328.1 ISEhe3, transposase orfB 4576121 12320519 SFxv_4753 Shigella flexneri 2002017 ISEhe3, transposase orfB YP_005729946.1 4575540 D 591020 CDS YP_005729947.1 384545883 12320520 complement(4576162..4576980) 1 NC_017328.1 IS600 orfB 4576980 12320520 SFxv_4754 Shigella flexneri 2002017 IS600 orfB YP_005729947.1 4576162 R 591020 CDS YP_005729948.1 384545884 12320521 4577383..4577703 1 NC_017328.1 hypothetical protein 4577703 12320521 SFxv_4755 Shigella flexneri 2002017 hypothetical protein YP_005729948.1 4577383 D 591020 CDS YP_005729949.1 384545885 12320522 complement(4577750..4578091) 1 NC_017328.1 Endoribonuclease symE 4578091 12320522 SFxv_4756 Shigella flexneri 2002017 Endoribonuclease symE YP_005729949.1 4577750 R 591020 CDS YP_005729950.1 384545886 12320523 complement(4578312..4579973) 1 NC_017328.1 hypothetical protein 4579973 12320523 SFxv_4757 Shigella flexneri 2002017 hypothetical protein YP_005729950.1 4578312 R 591020 CDS YP_005729951.1 384545887 12320524 complement(4579973..4581478) 1 NC_017328.1 putative restriction modification enzyme M subunit 4581478 12320524 SFxv_4758 Shigella flexneri 2002017 putative restriction modification enzyme M subunit YP_005729951.1 4579973 R 591020 CDS YP_005729952.1 384545888 12320525 complement(4581509..4583941) 1 NC_017328.1 Type I restriction enzyme EcoAI R protein 4583941 12320525 SFxv_4759 Shigella flexneri 2002017 Type I restriction enzyme EcoAI R protein YP_005729952.1 4581509 R 591020 CDS YP_005729953.1 384545889 12320526 complement(4584076..4584357) 1 NC_017328.1 IS600 ORF2 4584357 12320526 SFxv_4760 Shigella flexneri 2002017 IS600 ORF2 YP_005729953.1 4584076 R 591020 CDS YP_005729954.1 384545890 12320527 4584432..4584935 1 NC_017328.1 IS1 ORF2 4584935 12320527 SFxv_4761 Shigella flexneri 2002017 IS1 ORF2 YP_005729954.1 4584432 D 591020 CDS YP_005729955.1 384545891 12320528 4585056..4585712 1 NC_017328.1 hypothetical protein 4585712 12320528 SFxv_4762 Shigella flexneri 2002017 hypothetical protein YP_005729955.1 4585056 D 591020 CDS YP_005729956.1 384545892 12320529 complement(4585781..4586737) 1 NC_017328.1 putative GTPase 4586737 yjiA 12320529 yjiA Shigella flexneri 2002017 putative GTPase YP_005729956.1 4585781 R 591020 CDS YP_005729957.1 384545893 12320530 complement(4586748..4586951) 1 NC_017328.1 hypothetical protein 4586951 12320530 SFxv_4764 Shigella flexneri 2002017 hypothetical protein YP_005729957.1 4586748 R 591020 CDS YP_005729958.1 384545894 12320531 complement(4587001..4589166) 1 NC_017328.1 Carbon starvation family protein 4589166 yjiY 12320531 yjiY Shigella flexneri 2002017 Carbon starvation family protein YP_005729958.1 4587001 R 591020 CDS YP_005729959.1 384545895 12320532 complement(4589544..4590056) 1 NC_017328.1 4-hydroxyphenylacetate 3-monooxygenase reductase component 4590056 12320532 SFxv_4767 Shigella flexneri 2002017 4-hydroxyphenylacetate 3-monooxygenase reductase component YP_005729959.1 4589544 R 591020 CDS YP_005729960.1 384545896 12320534 complement(4591885..4592715) 1 NC_017328.1 hypothetical protein 4592715 12320534 SFxv_4769 Shigella flexneri 2002017 hypothetical protein YP_005729960.1 4591885 R 591020 CDS YP_005729961.1 384545897 12320535 complement(4592823..4593713) 1 NC_017328.1 putative 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein 4593713 12320535 SFxv_4771 Shigella flexneri 2002017 putative 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein YP_005729961.1 4592823 R 591020 CDS YP_005729962.1 384545898 12320536 complement(4593723..4595078) 1 NC_017328.1 putative 4-hydroxyphenylacetate permease 4595078 12320536 SFxv_4772 Shigella flexneri 2002017 putative 4-hydroxyphenylacetate permease YP_005729962.1 4593723 R 591020 CDS YP_005729963.1 384545899 12320537 complement(4595100..4595903) 1 NC_017328.1 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 4595903 12320537 SFxv_4773 Shigella flexneri 2002017 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase YP_005729963.1 4595100 R 591020 CDS YP_005729964.1 384545900 12320538 complement(4595914..4596717) 1 NC_017328.1 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 4596717 12320538 SFxv_4774 Shigella flexneri 2002017 2-oxo-hepta-3-ene-1,7-dioic acid hydratase YP_005729964.1 4595914 R 591020 CDS YP_005729965.1 384545901 12320539 complement(4596785..4597165) 1 NC_017328.1 5-carboxymethyl-2-hydroxymuconate delta-isomerase 4597165 12320539 SFxv_4775 Shigella flexneri 2002017 5-carboxymethyl-2-hydroxymuconate delta-isomerase YP_005729965.1 4596785 R 591020 CDS YP_005729966.1 384545902 12320540 complement(4597175..4598026) 1 NC_017328.1 Homoprotocatechuate dyoxygenase 4598026 12320540 SFxv_4776 Shigella flexneri 2002017 Homoprotocatechuate dyoxygenase YP_005729966.1 4597175 R 591020 CDS YP_005729967.1 384545903 12320541 complement(4598028..4599494) 1 NC_017328.1 5-carboxy-2-hydroxymuconate semialdehyde dehydrogenase 4599494 12320541 SFxv_4777 Shigella flexneri 2002017 5-carboxy-2-hydroxymuconate semialdehyde dehydrogenase YP_005729967.1 4598028 R 591020 CDS YP_005729968.1 384545904 12320542 complement(4599491..4600780) 1 NC_017328.1 5-oxo-1,2,5-tricarboxilic-3-penten acid decarboxylase/isomerase 4600780 12320542 SFxv_4778 Shigella flexneri 2002017 5-oxo-1,2,5-tricarboxilic-3-penten acid decarboxylase/isomerase YP_005729968.1 4599491 R 591020 CDS YP_005729969.1 384545905 12320543 4601052..4601498 1 NC_017328.1 Homoprotocatechuate degradative operon repressor 4601498 12320543 SFxv_4779 Shigella flexneri 2002017 Homoprotocatechuate degradative operon repressor YP_005729969.1 4601052 D 591020 CDS YP_005729970.1 384545906 12320544 4601617..4603281 1 NC_017328.1 Methyl-accepting chemotaxis protein I, serine sensor receptor 4603281 tsr 12320544 tsr Shigella flexneri 2002017 Methyl-accepting chemotaxis protein I, serine sensor receptor YP_005729970.1 4601617 D 591020 CDS YP_005729971.1 384545907 12320545 complement(4603330..4604691) 1 NC_017328.1 putative transport protein 4604691 yjjL 12320545 yjjL Shigella flexneri 2002017 putative transport protein YP_005729971.1 4603330 R 591020 CDS YP_005729972.1 384545908 12320546 complement(4604906..4605820) 1 NC_017328.1 GntR family transcriptional regulator 4605820 yjjM 12320546 yjjM Shigella flexneri 2002017 GntR family transcriptional regulator YP_005729972.1 4604906 R 591020 CDS YP_005729973.1 384545909 12320547 4606214..4606981 1 NC_017328.1 alcohol dehydrogenase GroES domain-containing protein 4606981 12320547 SFxv_4783 Shigella flexneri 2002017 alcohol dehydrogenase GroES domain-containing protein YP_005729973.1 4606214 D 591020 CDS YP_005729974.1 384545910 12320548 complement(4607119..4609410) 1 NC_017328.1 Phosphoglycerol transferase I 4609410 mdoB 12320548 mdoB Shigella flexneri 2002017 Phosphoglycerol transferase I YP_005729974.1 4607119 R 591020 CDS YP_005729975.1 384545911 12320549 complement(4609650..4610147) 1 NC_017328.1 putative glycoprotein/receptor 4610147 yjjA 12320549 yjjA Shigella flexneri 2002017 putative glycoprotein/receptor YP_005729975.1 4609650 R 591020 CDS YP_005729976.1 384545912 12320550 complement(4610193..4610930) 1 NC_017328.1 Chromosome replication 4610930 dnaC 12320550 dnaC Shigella flexneri 2002017 Chromosome replication YP_005729976.1 4610193 R 591020 CDS YP_005729977.1 384545913 12320551 complement(4610933..4611484) 1 NC_017328.1 Primosomal protein 1 4611484 dnaT 12320551 dnaT Shigella flexneri 2002017 Primosomal protein 1 YP_005729977.1 4610933 R 591020 CDS YP_005729978.1 384545914 12320552 complement(4611579..4612052) 1 NC_017328.1 hypothetical protein 4612052 yjjB 12320552 yjjB Shigella flexneri 2002017 hypothetical protein YP_005729978.1 4611579 R 591020 CDS YP_005729979.1 384545915 12320553 complement(4612043..4612876) 1 NC_017328.1 hypothetical protein 4612876 yjjP 12320553 yjjP Shigella flexneri 2002017 hypothetical protein YP_005729979.1 4612043 R 591020 CDS YP_005729980.1 384545916 12320554 4613631..4614134 1 NC_017328.1 IS1 ORF2 4614134 12320554 SFxv_4790 Shigella flexneri 2002017 IS1 ORF2 YP_005729980.1 4613631 D 591020 CDS YP_005729981.1 384545917 12320555 4614136..4614720 1 NC_017328.1 Global regulator 4614720 yjjQ 12320555 yjjQ Shigella flexneri 2002017 Global regulator YP_005729981.1 4614136 D 591020 CDS YP_005729982.1 384545918 12320556 4614678..4615355 1 NC_017328.1 LuxR family transcriptional regulator 4615355 bglJ 12320556 bglJ Shigella flexneri 2002017 LuxR family transcriptional regulator YP_005729982.1 4614678 D 591020 CDS YP_005729983.1 384545919 12320557 complement(4615393..4616181) 1 NC_017328.1 Ferric iron reductase 4616181 fhuF 12320557 fhuF Shigella flexneri 2002017 Ferric iron reductase YP_005729983.1 4615393 R 591020 CDS YP_005729984.1 384545920 12320558 4616283..4616558 1 NC_017328.1 putative inner membrane protein 4616558 yjjZ 12320558 yjjZ Shigella flexneri 2002017 putative inner membrane protein YP_005729984.1 4616283 D 591020 CDS YP_005729985.1 384545921 12320562 complement(4617196..4618227) 1 NC_017328.1 RRNA (Guanine-N(2)-)-methyltransferase 4618227 rsmC 12320562 rsmC Shigella flexneri 2002017 RRNA (Guanine-N(2)-)-methyltransferase YP_005729985.1 4617196 R 591020 CDS YP_005729986.1 384545922 12320563 4618330..4618743 1 NC_017328.1 DNA polymerase III subunit psi 4618743 holD 12320563 holD Shigella flexneri 2002017 DNA polymerase III subunit psi YP_005729986.1 4618330 D 591020 CDS YP_005729987.1 384545923 12320564 4618712..4619158 1 NC_017328.1 Ribosomal-protein-alanine acetyltransferase 4619158 rimI 12320564 rimI Shigella flexneri 2002017 Ribosomal-protein-alanine acetyltransferase YP_005729987.1 4618712 D 591020 CDS YP_005729988.1 384545924 12320565 4619173..4619850 1 NC_017328.1 putative phosphatase 4619850 yjjG 12320565 yjjG Shigella flexneri 2002017 putative phosphatase YP_005729988.1 4619173 D 591020 CDS YP_005729989.1 384545925 12320566 4619941..4621530 1 NC_017328.1 Peptide chain release factor 3 4621530 prfC 12320566 prfC Shigella flexneri 2002017 Peptide chain release factor 3 YP_005729989.1 4619941 D 591020 CDS YP_005729990.1 384545926 12320567 4621923..4622528 1 NC_017328.1 Hyperosmotically inducible periplasmic protein 4622528 osmY 12320567 osmY Shigella flexneri 2002017 Hyperosmotically inducible periplasmic protein YP_005729990.1 4621923 D 591020 CDS YP_005729991.1 384545927 12320569 4622928..4624001 1 NC_017328.1 Phospholipase, patatin family 4624001 yjjU 12320569 yjjU Shigella flexneri 2002017 Phospholipase, patatin family YP_005729991.1 4622928 D 591020 CDS YP_005729992.1 384545928 12320571 4623998..4624780 1 NC_017328.1 Mg-dependent DNase 4624780 yjjV 12320571 yjjV Shigella flexneri 2002017 Mg-dependent DNase YP_005729992.1 4623998 D 591020 CDS YP_005729993.1 384545929 12320572 complement(4624994..4625857) 1 NC_017328.1 putative Pyruvate-formate lyase-activating enzyme 4625857 yjjW 12320572 yjjW Shigella flexneri 2002017 putative Pyruvate-formate lyase-activating enzyme YP_005729993.1 4624994 R 591020 CDS YP_005729994.1 384545930 12320573 complement(4625829..4627370) 1 NC_017328.1 hypothetical protein 4627370 12320573 SFxv_4805 Shigella flexneri 2002017 hypothetical protein YP_005729994.1 4625829 R 591020 CDS YP_005729995.1 384545931 12320574 4627346..4627471 1 NC_017328.1 hypothetical protein 4627471 12320574 SFxv_4804 Shigella flexneri 2002017 hypothetical protein YP_005729995.1 4627346 D 591020 CDS YP_005729996.1 384545932 12320575 4627628..4628407 1 NC_017328.1 2-deoxyribose-5-phosphate aldolase 4628407 deoC 12320575 deoC Shigella flexneri 2002017 2-deoxyribose-5-phosphate aldolase YP_005729996.1 4627628 D 591020 CDS YP_005729997.1 384545933 12320576 4628534..4629856 1 NC_017328.1 thymidine phosphorylase 4629856 deoA 12320576 deoA Shigella flexneri 2002017 thymidine phosphorylase YP_005729997.1 4628534 D 591020 CDS YP_005729998.1 384545934 12320577 4629908..4631131 1 NC_017328.1 Phosphopentomutase 4631131 deoB 12320577 deoB Shigella flexneri 2002017 Phosphopentomutase YP_005729998.1 4629908 D 591020 CDS YP_005729999.1 384545935 12320578 4631188..4631907 1 NC_017328.1 purine nucleoside phosphorylase 4631907 deoD 12320578 deoD Shigella flexneri 2002017 purine nucleoside phosphorylase YP_005729999.1 4631188 D 591020 CDS YP_005730000.1 384545936 12320579 complement(4632068..4632331) 1 NC_017328.1 XRE family transcriptional regulator 4632331 12320579 SFxv_4810 Shigella flexneri 2002017 XRE family transcriptional regulator YP_005730000.1 4632068 R 591020 CDS YP_005730001.1 384545937 12320581 complement(4633406..4634050) 1 NC_017328.1 putative membrane protein affecting hemolysin expression 4634050 ytjB 12320581 ytjB Shigella flexneri 2002017 putative membrane protein affecting hemolysin expression YP_005730001.1 4633406 R 591020 CDS YP_005730002.1 384545938 12320582 4634156..4635124 1 NC_017328.1 phosphoserine phosphatase 4635124 serB 12320582 serB Shigella flexneri 2002017 phosphoserine phosphatase YP_005730002.1 4634156 D 591020 CDS YP_005730003.1 384545939 12320583 4635173..4636555 1 NC_017328.1 DNA repair protein radA 4636555 radA 12320583 radA Shigella flexneri 2002017 DNA repair protein radA YP_005730003.1 4635173 D 591020 CDS YP_005730004.1 384545940 12320584 4636576..4637808 1 NC_017328.1 putative nadAB transcriptional regulator 4637808 nadR 12320584 nadR Shigella flexneri 2002017 putative nadAB transcriptional regulator YP_005730004.1 4636576 D 591020 CDS YP_005730005.1 384545941 12320585 complement(4638116..4639783) 1 NC_017328.1 putative ABC transporter ATP-binding protein yjjK 4639783 yjjK 12320585 yjjK Shigella flexneri 2002017 putative ABC transporter ATP-binding protein yjjK YP_005730005.1 4638116 R 591020 CDS YP_005730006.1 384545942 12320586 4639994..4641931 1 NC_017328.1 lytic murein transglycosylase 4641931 slt 12320586 slt Shigella flexneri 2002017 lytic murein transglycosylase YP_005730006.1 4639994 D 591020 CDS YP_005730007.1 384545943 12320587 4642021..4642347 1 NC_017328.1 Trp operon repressor 4642347 trpR 12320587 trpR Shigella flexneri 2002017 Trp operon repressor YP_005730007.1 4642021 D 591020 CDS YP_005730008.1 384545944 12320588 complement(4642583..4642951) 1 NC_017328.1 hypothetical protein 4642951 yjjX 12320588 yjjX Shigella flexneri 2002017 hypothetical protein YP_005730008.1 4642583 R 591020 CDS YP_005730009.1 384545945 12320589 4643003..4643650 1 NC_017328.1 putative phosphoglycerate mutase gpmB 4643650 ytjC 12320589 ytjC Shigella flexneri 2002017 putative phosphoglycerate mutase gpmB YP_005730009.1 4643003 D 591020 CDS YP_005730010.1 384545946 12320590 complement(4643647..4644516) 1 NC_017328.1 Right origin-binding protein 4644516 rob 12320590 rob Shigella flexneri 2002017 Right origin-binding protein YP_005730010.1 4643647 R 591020 CDS YP_005730011.1 384545947 12320591 4644727..4645200 1 NC_017328.1 CreA family protein precursor 4645200 creA 12320591 creA Shigella flexneri 2002017 CreA family protein precursor YP_005730011.1 4644727 D 591020 CDS YP_005730012.1 384545948 12320592 4645213..4645902 1 NC_017328.1 Catabolic regulation response regulator 4645902 creB 12320592 creB Shigella flexneri 2002017 Catabolic regulation response regulator YP_005730012.1 4645213 D 591020 CDS YP_005730013.1 384545949 12320593 4645902..4647326 1 NC_017328.1 putative Sensor protein 4647326 creC 12320593 creC Shigella flexneri 2002017 putative Sensor protein YP_005730013.1 4645902 D 591020 CDS YP_005730014.1 384545950 12320594 4647384..4648736 1 NC_017328.1 Inner membrane protein CreD 4648736 creD 12320594 creD Shigella flexneri 2002017 Inner membrane protein CreD YP_005730014.1 4647384 D 591020 CDS YP_005730015.1 384545951 12320595 complement(4648795..4649511) 1 NC_017328.1 Aerobic respiration control protein arcA 4649511 arcA 12320595 arcA Shigella flexneri 2002017 Aerobic respiration control protein arcA YP_005730015.1 4648795 R 591020 CDS YP_005730016.1 384545952 12320596 4649607..4649747 1 NC_017328.1 hypothetical protein 4649747 yjjY 12320596 yjjY Shigella flexneri 2002017 hypothetical protein YP_005730016.1 4649607 D 591020 CDS YP_005730017.1 384545953 12320597 4650147..4650833 1 NC_017328.1 putative rRNA methylase 4650833 yjtD 12320597 yjtD Shigella flexneri 2002017 putative rRNA methylase YP_005730017.1 4650147 D 591020 CDS YP_005730018.1 384541561 12228425 complement(278..673) 1 NC_017329.1 hypothetical protein 673 12228425 SFxv_5143 Shigella flexneri 2002017 hypothetical protein YP_005730018.1 278 R 591020 CDS YP_005730019.1 384541562 12228426 807..956 1 NC_017329.1 hypothetical protein 956 12228426 SFxv_5144 Shigella flexneri 2002017 hypothetical protein YP_005730019.1 807 D 591020 CDS YP_005730020.1 384541563 12228427 complement(1701..2189) 1 NC_017329.1 hypothetical protein 2189 12228427 SFxv_5145 Shigella flexneri 2002017 hypothetical protein YP_005730020.1 1701 R 591020 CDS YP_005730021.1 384541564 12228428 2359..2748 1 NC_017329.1 hypothetical protein 2748 12228428 SFxv_5146 Shigella flexneri 2002017 hypothetical protein YP_005730021.1 2359 D 591020 CDS YP_005730022.1 384541565 12228429 2792..3331 1 NC_017329.1 putative trasposase 3331 12228429 SFxv_5147 Shigella flexneri 2002017 putative trasposase YP_005730022.1 2792 D 591020 CDS YP_005730023.1 384541566 12228430 complement(3303..4148) 1 NC_017329.1 Streptomycin 3''-kinase 4148 12228430 SFxv_5148 Shigella flexneri 2002017 Streptomycin 3''-kinase YP_005730023.1 3303 R 591020 CDS YP_005730024.1 384541567 12228431 complement(4139..4942) 1 NC_017329.1 putative trasposase 4942 12228431 SFxv_5149 Shigella flexneri 2002017 putative trasposase YP_005730024.1 4139 R 591020 CDS YP_005730025.1 384541568 12228432 complement(5003..5818) 1 NC_017329.1 dihydropteroate synthase 5818 12228432 SFxv_5150 Shigella flexneri 2002017 dihydropteroate synthase YP_005730025.1 5003 R 591020 CDS YP_005730026.1 384545960 12228434 complement(169..333) 1 NC_017330.1 putative Rom-like protein 333 12228434 SFxv_5155 Shigella flexneri 2002017 putative Rom-like protein YP_005730026.1 169 R 591020 CDS YP_005730027.1 384545961 12228435 453..662 1 NC_017330.1 hypothetical protein 662 12228435 SFxv_5156 Shigella flexneri 2002017 hypothetical protein YP_005730027.1 453 D 591020 CDS YP_005730028.1 384545962 12228436 complement(807..980) 1 NC_017330.1 hypothetical protein 980 12228436 SFxv_5157 Shigella flexneri 2002017 hypothetical protein YP_005730028.1 807 R 591020 CDS YP_005730029.1 384545963 12228437 complement(977..1114) 1 NC_017330.1 hypothetical protein 1114 12228437 SFxv_5158 Shigella flexneri 2002017 hypothetical protein YP_005730029.1 977 R 591020 CDS YP_005730030.1 384545964 12228438 1214..2323 1 NC_017330.1 ferric enterobactin transport 2323 12228438 SFxv_5159 Shigella flexneri 2002017 ferric enterobactin transport YP_005730030.1 1214 D 591020 CDS YP_005730031.1 384545965 12228439 complement(2657..2824) 1 NC_017330.1 hypothetical protein 2824 12228439 SFxv_5160 Shigella flexneri 2002017 hypothetical protein YP_005730031.1 2657 R 591020 CDS