-- dump date   	20140620_063200
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
YP_006018546.1	KEGG: son:SO_A0023 plasmid maintenance system antidote protein HigA; TIGRFAM: Addiction module antidote protein, HigA; SMART: Helix-turn-helix type 3
YP_006018547.1	PFAM: Plasmid maintenance system killer; KEGG: son:SO_A0022 plasmid maintenance system toxin protein HigB
YP_006018548.1	KEGG: swd:Swoo_4020 beta-lactamase domain-containing protein
YP_006018551.1	KEGG: plm:Plim_3154 hypothetical protein
YP_006018552.1	KEGG: hypothetical protein
YP_006018553.1	KEGG: chy:CHY_0826 hypothetical protein
YP_006018554.1	PFAM: ParB protein family, C-terminal; KEGG: son:SO_A0096 plasmid partition protein ParB
YP_006018555.1	PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: son:SO_A0095 plasmid partition protein ParA
YP_006018556.1	KEGG: son:SO_A0094 hypothetical protein
YP_006018557.1	KEGG: son:SO_A0058 hypothetical protein
YP_006018559.1	PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal
YP_006018561.1	KEGG: vsa:VSAL_p840_02 conjugative transfer protein TraA, putative fimbrial protein precursor
YP_006018562.1	KEGG: vvy:VVP05 putative conjugative transfer protein TraL; TIGRFAM: Type IV conjugative transfer system protein TraL; PFAM: Type IV conjugative transfer system protein TraL, proteobacteria
YP_006018563.1	KEGG: vsa:VSAL_p840_04 conjugative transfer protein TraE; TIGRFAM: TraE; PFAM: TraE
YP_006018564.1	TIGRFAM: Type-F conjugative transfer system secretin TraK; KEGG: ppr:PBPRC0005 hypothetical protein
YP_006018565.1	KEGG: ppr:PBPRC0006 putative sex pilus assembly and synthesis protein TraB
YP_006018566.1	KEGG: ppr:PBPRC0007 hypothetical protein; TIGRFAM: Type IV secretion system, TraV; PFAM: Type IV secretion system, TraV
YP_006018567.1	TIGRFAM: Type-IV secretion system protein TraC; KEGG: ppr:PBPRC0008 putative sex pilus assembly and synthesis protein TraC
YP_006018568.1	PFAM: Type-F conjugative transfer system protein TrbI; KEGG: stm:PSLT089 conjugal transfer protein TrbI
YP_006018569.1	TIGRFAM: Type-F conjugative transfer system protein TraW; KEGG: ppr:PBPRC0010 sex pilus assembly and synthesis protein TraW
YP_006018570.1	PFAM: TraU; KEGG: ppr:PBPRC0011 putative sex pilus assembly and synthesis protein TraU
YP_006018571.1	KEGG: ppr:PBPRC0012 conjugative transfer protein TrbC; TIGRFAM: Type-F conjugative transfer system pilin assembly protein TrbC, subgroup; PFAM: Type-F conjugative transfer system pilin assembly protein TrbC
YP_006018572.1	TIGRFAM: Type-F conjugative transfer system mating-pair stabilisation protein TraN; KEGG: ppr:PBPRC0013 conjugal transfer mating pair stabilization protein TraN
YP_006018573.1	TIGRFAM: Type-F conjugative transfer system pilin assembly protein TraF; KEGG: ppr:PBPRC0014 sex pilus assembly and synthesis protein TraF
YP_006018575.1	TIGRFAM: Type-F conjugative transfer system pilin assembly thiol-disulphide isomerase TrbB; KEGG: ppr:PBPRC0015 putative thiol-disulfide isomerase
YP_006018577.1	PFAM: Type IV conjugative transfer system protein TraH; KEGG: vvu:VV2_0648 hypothetical protein
YP_006018578.1	PFAM: TraG-like, N-terminal; KEGG: ppr:PBPRC0016 putative sex pilus assembly and mating pair TraG
YP_006018580.1	KEGG: ppr:PBPRC0019 conjugative transfer protein TraD; TIGRFAM: Type IV conjugative transfer system coupling protein TraD; PFAM: Type IV secretion-system, TraD, DNA-binding domain
YP_006018582.1	KEGG: son:SO_A0051 hypothetical protein
YP_006018583.1	manually curated; PFAM: Helix-turn-helix type 3; KEGG: she:Shewmr4_3201 XRE family transcriptional regulator; SMART: Helix-turn-helix type 3
YP_006018584.1	PFAM: Restriction endonuclease, type II, BstXI; KEGG: cef:CE1494 hypothetical protein
YP_006018585.1	PFAM: DNA methylase N-4/N-6; KEGG: cef:CE1493 hypothetical protein
YP_006018586.1	PFAM: Integrase, catalytic core, phage; KEGG: son:SO_A0045 phage integrase family site specific recombinase
YP_006018587.1	PFAM: Integrase, catalytic core, phage; KEGG: son:SO_A0044 phage integrase family site specific recombinase
YP_006018588.1	KEGG: vsa:VSAL_p840_34 hypothetical protein
YP_006018589.1	PFAM: Domain of unknown function DUF1738; KEGG: sew:SeSA_B0128 antirestriction protein
YP_006018590.1	PFAM: Transposase, IS4-like; KEGG: sfr:Sfri_3147 transposase, IS4 family protein
YP_006018591.1	KEGG: sth:STH1871 hypothetical protein
YP_006018592.1	PFAM: GCN5-related N-acetyltransferase; KEGG: xne:XNC1_3899 hypothetical protein
YP_006018593.1	PFAM: Protein of unknown function DUF1778; KEGG: plu:plu0959 hypothetical protein
YP_006018595.1	KEGG: see:SNSL254_p_0132 hypothetical protein
YP_006018597.1	KEGG: son:SO_A0034 hypothetical protein
YP_006018598.1	KEGG: son:SO_A0033 hypothetical protein
YP_006018599.1	KEGG: son:SO_A0032 hypothetical protein
YP_006018600.1	KEGG: son:SO_A0031 ParB family partitioning protein; PFAM: ParB-like nuclease; SMART: ParB-like nuclease
YP_006018604.1	KEGG: asa:ASA_P5G016 hypothetical protein
YP_006018607.1	KEGG: hypothetical protein
YP_006018609.1	PFAM: DNA-repair protein, UmuC-like; KEGG: son:SO_A0012 SOS mutagenesis protein RulB
YP_006018610.1	PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: spl:Spea_2196 peptidase S24/S26 domain-containing protein
YP_006018611.1	KEGG: amc:MADE_00168 hypothetical protein
YP_006018612.1	PFAM: Resolvase, N-terminal; KEGG: son:SO_A0026 resolvase family site-specific recombinase
YP_006018613.1	SMART: Chromosomal replication initiator, DnaA C-terminal; ATPase, AAA+ type, core; TIGRFAM: Chromosomal replication control, initiator DnaA; KEGG: shw:Sputw3181_0001 chromosomal replication initiation protein; HAMAP: Chromosomal replication control, initiator DnaA; PFAM: Chromosomal replication control, initiator (DnaA)/regulator (Hda); Chromosomal replication initiator, DnaA C-terminal
YP_006018614.1	SMART: DNA polymerase III, beta chain; TIGRFAM: DNA polymerase III, beta chain; KEGG: shw:Sputw3181_0002 DNA polymerase III, beta subunit; PFAM: DNA polymerase III, beta chain
YP_006018615.1	TIGRFAM: DNA-binding, RecF; PFAM: RecF/RecN/SMC protein, N-terminal; KEGG: shw:Sputw3181_0003 recombination protein F; SMART: ATPase, AAA+ type, core
YP_006018616.1	TIGRFAM: DNA gyrase, subunit B; PFAM: DNA topoisomerase, type IIA, subunit B, region 2; ATP-binding region, ATPase-like; Toprim domain; DNA topoisomerase, type IIA, subunit B, C-terminal; KEGG: shw:Sputw3181_0004 DNA gyrase, B subunit; SMART: DNA topoisomerase, type IIA, subunit B or N-terminal; ATP-binding region, ATPase-like
YP_006018617.1	PFAM: Glutathione S-transferase, N-terminal; KEGG: son:SO_0012 glutathione S-transferase family protein
YP_006018618.1	KEGG: son:SO_0714 monoheme cytochrome c
YP_006018619.1	KEGG: son:SO_0715 oxidoreductase, molybdopterin-binding; PFAM: Oxidoreductase, molybdopterin binding; Moybdenum cofactor oxidoreductase, dimerisation
YP_006018620.1	KEGG: son:SO_0716 monoheme cytochrome c, putative
YP_006018621.1	KEGG: son:SO_0717 monoheme cytochrome c
YP_006018622.1	SMART: Allophanate hydrolase subunit 2; TIGRFAM: Allophanate hydrolase subunit 2; KEGG: saz:Sama_0022 UreA carboxylase; PFAM: Allophanate hydrolase subunit 2
YP_006018623.1	PFAM: Metal-dependent hydrolase HDOD; KEGG: spc:Sputcn32_0005 putative signal transduction protein
YP_006018624.1	TIGRFAM: Glycyl-tRNA synthetase, class IIc, beta subunit; HAMAP: Glycyl-tRNA synthetase beta subunit; KEGG: shw:Sputw3181_0006 glycyl-tRNA synthetase subunit beta
YP_006018625.1	PFAM: Glycyl-tRNA synthetase, class IIc, alpha subunit; TIGRFAM: Glycyl-tRNA synthetase, class IIc, alpha subunit; HAMAP: Glycyl-tRNA synthetase, class IIc, alpha subunit; KEGG: shw:Sputw3181_0007 glycyl-tRNA synthetase subunit alpha
YP_006018626.1	TIGRFAM: DNA-3-methyladenine glycosylase I; KEGG: spc:Sputcn32_0008 DNA-3-methyladenine glycosylase I; PFAM: Methyladenine glycosylase
YP_006018627.1	PFAM: Amidohydrolase 1; WD40-like Beta Propeller; KEGG: shw:Sputw3181_0009 amidohydrolase
YP_006018628.1	PFAM: Molybdenum cofactor sulfurase, C-terminal; KEGG: shw:Sputw3181_0010 hypothetical protein
YP_006018629.1	KEGG: shw:Sputw3181_0011 sulfur transfer protein SirA; HAMAP: Sulfurtransferase tusA; PFAM: SirA-like
YP_006018630.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: shn:Shewana3_0022 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_006018631.1	TIGRFAM: Acetyl-CoA C-acyltransferase FadA; Thiolase; HAMAP: Acetyl-CoA C-acyltransferase FadA; KEGG: spc:Sputcn32_0012 3-ketoacyl-CoA thiolase
YP_006018632.1	PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; Crotonase, core; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; TIGRFAM: Fatty oxidation complex, alpha subunit FadB; HAMAP: Fatty oxidation complex, alpha subunit FadB; KEGG: shw:Sputw3181_0013 multifunctional fatty acid oxidation complex subunit alpha
YP_006018633.1	KEGG: shw:Sputw3181_0014 proline dipeptidase; PFAM: Peptidase M24, structural domain
YP_006018634.1	KEGG: shm:Shewmr7_0018 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0029, Impact; PFAM: Uncharacterised protein family UPF0029, Impact, N-terminal; Uncharacterised protein family UPF0029, Impact, C-terminal
YP_006018635.1	KEGG: shn:Shewana3_0027 TrkH family potassium uptake protein; TIGRFAM: Potassium uptake protein TrkH; PFAM: Cation transporter
YP_006018636.1	KEGG: shw:Sputw3181_0017 protoporphyrinogen oxidase
YP_006018637.1	KEGG: shn:Shewana3_0029 ArsR family transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR
YP_006018638.1	KEGG: shn:Shewana3_0030 protoporphyrinogen oxidase; PFAM: Flavodoxin/nitric oxide synthase
YP_006018639.1	KEGG: shm:Shewmr7_0023 TrkH family potassium uptake protein; TIGRFAM: Potassium uptake protein TrkH; PFAM: Cation transporter
YP_006018640.1	PFAM: Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; KEGG: shw:Sputw3181_0021 potassium transporter peripheral membrane component
YP_006018641.1	KEGG: shw:Sputw3181_0022 sun protein; TIGRFAM: Fmu, rRNA SAM-dependent methyltransferase; PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; NusB/RsmB/TIM44
YP_006018642.1	PFAM: Formyl transferase, N-terminal; Formyl transferase, C-terminal; TIGRFAM: Methionyl-tRNA formyltransferase; HAMAP: Methionyl-tRNA formyltransferase; KEGG: shw:Sputw3181_0023 methionyl-tRNA formyltransferase
YP_006018643.1	TIGRFAM: Formylmethionine deformylase; HAMAP: Formylmethionine deformylase; KEGG: son:SO_0032 peptide deformylase; PFAM: Formylmethionine deformylase
YP_006018644.1	KEGG: shm:Shewmr7_0028 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup
YP_006018645.1	KEGG: shw:Sputw3181_0026 DNA protecting protein DprA; TIGRFAM: DNA recombination-mediator protein A; PFAM: DNA recombination-mediator protein A
YP_006018646.1	KEGG: shw:Sputw3181_0027 hypothetical protein; HAMAP: Protein smg; PFAM: Protein of unknown function DUF494
YP_006018647.1	PFAM: DNA topoisomerase, type IA, zn finger; KEGG: shw:Sputw3181_0028 DNA topoisomerase type IA Zn finger domain-containing protein
YP_006018648.1	TIGRFAM: Sua5/YciO/YrdC/YwlC; HAMAP: ribosome maturation factor rimN; KEGG: shw:Sputw3181_0029 SUA5/YciO/YrdC/YwlC family protein; PFAM: Sua5/YciO/YrdC, N-terminal
YP_006018649.1	HAMAP: Coproporphyrinogen-III oxidase, aerobic; KEGG: shw:Sputw3181_0030 coproporphyrinogen III oxidase; PFAM: Coproporphyrinogen III oxidase
YP_006018650.1	PFAM: Globin, truncated bacterial-like; KEGG: shw:Sputw3181_0031 globin
YP_006018651.1	TIGRFAM: Quinate/shikimate 5-dehydrogenase; HAMAP: Shikimate dehydrogenase; KEGG: shw:Sputw3181_0032 shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding, N-terminal; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase
YP_006018652.1	PFAM: Protein of unknown function DUF1488; KEGG: shw:Sputw3181_0033 hypothetical protein
YP_006018653.1	KEGG: shw:Sputw3181_0034 carbonic anhydrase
YP_006018654.1	PFAM: Uncharacterised protein family UPF0153; KEGG: shn:Shewana3_0046 hypothetical protein
YP_006018655.1	KEGG: shw:Sputw3181_4042 BadM/Rrf2 family transcriptional regulator; TIGRFAM: Transcriptional regulator, Rrf2; PFAM: Transcriptional regulator, Rrf2
YP_006018656.1	PFAM: Protein of unknown function DUF610, YibQ; KEGG: shm:Shewmr7_0040 protein of unknown function DUF610, YibQ
YP_006018657.1	TIGRFAM: Peptidase S41A, C-terminal protease; PFAM: Peptidase S41; PDZ/DHR/GLGF; KEGG: shn:Shewana3_0049 C-terminal processing peptidase-3; SMART: Peptidase S41; PDZ/DHR/GLGF
YP_006018658.1	PFAM: Peptidase M23; KEGG: shw:Sputw3181_4039 peptidase M23B
YP_006018659.1	PFAM: BPG-independent PGAM, N-terminal; Metalloenzyme; TIGRFAM: Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; HAMAP: Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; KEGG: spc:Sputcn32_0040 phosphoglyceromutase
YP_006018660.1	KEGG: shw:Sputw3181_4037 rhodanese domain-containing protein; PFAM: Rhodanese-like; SMART: Rhodanese-like
YP_006018661.1	TIGRFAM: Bacterial protein export chaperone SecB; HAMAP: Bacterial protein export chaperone SecB; KEGG: shw:Sputw3181_4036 preprotein translocase subunit SecB; PFAM: Bacterial protein export chaperone SecB
YP_006018662.1	PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal; NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal; KEGG: shw:Sputw3181_4035 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
YP_006018663.1	KEGG: shw:Sputw3181_4034 hypothetical protein; TIGRFAM: HI0933-like protein; PFAM: HI0933-like protein
YP_006018664.1	KEGG: she:Shewmr4_1443 hypothetical protein
YP_006018665.1	PFAM: Integrase, catalytic core; KEGG: sdn:Sden_2262 integrase catalytic subunit
YP_006018667.1	TIGRFAM: Potassium uptake protein TrkH; KEGG: she:Shewmr4_0051 TrkH family potassium uptake protein; PFAM: Cation transporter
YP_006018668.1	PFAM: Regulator of K+ conductance, N-terminal; KEGG: shw:Sputw3181_4031 TrkA domain-containing protein
YP_006018669.1	KEGG: shw:Sputw3181_4030 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region
YP_006018670.1	KEGG: shw:Sputw3181_4029 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_006018671.1	PFAM: Pirin, N-terminal; Pirin, C-terminal; KEGG: shw:Sputw3181_4028 pirin domain-containing protein
YP_006018672.1	KEGG: shm:Shewmr7_0054 signal transduction histidine kinase, LytS; PFAM: Signal transduction histidine kinase, internal region; Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region; ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like
YP_006018673.1	KEGG: shm:Shewmr7_0055 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; LytTr DNA-binding region; SMART: Signal transduction response regulator, receiver region
YP_006018674.1	PFAM: Major facilitator superfamily MFS-1; KEGG: shm:Shewmr7_0056 major facilitator transporter
YP_006018675.1	PFAM: Protein of unknown function DUF81; KEGG: shm:Shewmr7_0058 hypothetical protein
YP_006018676.1	PFAM: NLP/P60; KEGG: shn:Shewana3_0063 NLP/P60 protein
YP_006018677.1	PFAM: Major facilitator superfamily MFS-1; KEGG: shn:Shewana3_0064 major facilitator transporter
YP_006018678.1	KEGG: she:Shewmr4_0063 LacI family transcription regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; SMART: HTH transcriptional regulator, LacI
YP_006018679.1	SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; TIGRFAM: sucrose phosphorylase; KEGG: shn:Shewana3_0066 sucrose phosphorylase; PFAM: Glycosyl hydrolase, family 13, catalytic region
YP_006018680.1	PFAM: Major facilitator superfamily MFS-1; KEGG: she:Shewmr4_0065 major facilitator transporter
YP_006018681.1	PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: shn:Shewana3_0068 TonB-dependent receptor
YP_006018682.1	KEGG: shm:Shewmr7_0065 ribokinase-like domain-containing protein; PFAM: Carbohydrate/purine kinase
YP_006018683.1	KEGG: shw:Sputw3181_4025 molybdenum cofactor biosynthesis protein MogA; TIGRFAM: Molybdenum cofactor synthesis; PFAM: Molybdopterin binding
YP_006018684.1	PFAM: Alpha-2-macroglobulin, N-terminal; Alpha-2-macroglobulin, N-terminal 2; KEGG: son:SO_0066 hypothetical protein
YP_006018685.1	KEGG: son:SO_0067 penicillin-binding protein 1C, putative; TIGRFAM: Penicillin-binding protein 1C; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase; Penicillin-binding, C-terminal
YP_006018686.1	KEGG: shw:Sputw3181_4024 hypothetical protein
YP_006018687.1	KEGG: spc:Sputcn32_0055 transport protein, putative
YP_006018688.1	PFAM: ABC transporter-like; KEGG: shw:Sputw3181_4022 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_006018689.1	PFAM: Peptidase S33, tripeptidyl-peptidase C-terminal; Alpha/beta hydrolase fold-1; KEGG: shw:Sputw3181_4021 TAP domain-containing protein
YP_006018690.1	KEGG: shw:Sputw3181_4020 regulatory protein GntR, HTH; PFAM: HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR
YP_006018691.1	KEGG: shw:Sputw3181_4019 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core
YP_006018692.1	KEGG: shw:Sputw3181_4018 hypothetical protein
YP_006018693.1	KEGG: spc:Sputcn32_0061 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase
YP_006018694.1	KEGG: spc:Sputcn32_0062 MORN repeat-containing protein
YP_006018695.1	PFAM: Thioesterase superfamily; KEGG: shn:Shewana3_0082 thioesterase superfamily protein
YP_006018696.1	PFAM: HPP; KEGG: spc:Sputcn32_0064 HPP family protein+B94
YP_006018697.1	KEGG: slo:Shew_3773 hypothetical protein
YP_006018698.1	PFAM: Thioesterase superfamily; KEGG: shw:Sputw3181_4011 thioesterase superfamily protein
YP_006018699.1	PFAM: Glutathione-dependent formaldehyde-activating, GFA; KEGG: spc:Sputcn32_0067 glutathione-dependent formaldehyde-activating, GFA
YP_006018700.1	KEGG: son:SO_0082 MerR family transcriptional regulator; PFAM: HTH transcriptional regulator, MerR; Transcription regulator MerR, DNA binding; SMART: HTH transcriptional regulator, MerR
YP_006018701.1	PFAM: Carboxymuconolactone decarboxylase; KEGG: son:SO_0083 carboxymuconolactone decarboxylase family protein
YP_006018702.1	PFAM: Haloacid dehalogenase-like hydrolase; TIGRFAM: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 1; HAMAP: Enolase-phosphatase E1; KEGG: shw:Sputw3181_4008 2,3-diketo-5-methylthio-1-phosphopentane phosphatase
YP_006018703.1	KEGG: shw:Sputw3181_4007 hypothetical protein
YP_006018704.1	KEGG: shn:Shewana3_0091 hypothetical protein
YP_006018705.1	PFAM: Glycerophosphoryl diester phosphodiesterase; Glycerophosphoryl diester phosphodiesterase, membrane domain; KEGG: shw:Sputw3181_4006 glycerophosphoryl diester phosphodiesterase
YP_006018706.1	PFAM: Negative transcriptional regulator; KEGG: pat:Patl_2431 negative transcriptional regulator
YP_006018708.1	PFAM: Endonuclease I; Peptidase, C-terminal, archaeal/bacterial; KEGG: sdn:Sden_3289 endonuclease I
YP_006018709.1	KEGG: shw:Sputw3181_4002 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR
YP_006018710.1	PFAM: Siderophore-interacting protein; FAD-binding 9, siderophore-interacting; KEGG: shw:Sputw3181_4001 siderophore-interacting protein
YP_006018711.1	PFAM: Amidohydrolase 1; TIGRFAM: Imidazolonepropionase; HAMAP: Imidazolonepropionase; KEGG: spc:Sputcn32_0077 imidazolonepropionase
YP_006018712.1	TIGRFAM: Histidine utilization repressor; PFAM: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR; KEGG: shw:Sputw3181_3999 histidine utilization repressor; SMART: HTH transcriptional regulator, GntR
YP_006018713.1	PFAM: Urocanase; TIGRFAM: Urocanase; HAMAP: Urocanate hydratase; KEGG: shw:Sputw3181_3998 urocanate hydratase
YP_006018714.1	PFAM: Phenylalanine/histidine ammonia-lyase; TIGRFAM: Histidine ammonia-lyase; HAMAP: Histidine ammonia-lyase; KEGG: shw:Sputw3181_3997 histidine ammonia-lyase
YP_006018715.1	PFAM: Protein of unknown function DUF2257; KEGG: gvi:glr2602 hypothetical protein
YP_006018716.1	KEGG: lpf:lpl0212 hypothetical protein; PFAM: Aminotransferase, class I/II
YP_006018717.1	PFAM: AzlC-like; KEGG: cai:Caci_6337 AzlC family protein
YP_006018718.1	PFAM: Branched-chain amino acid transport; KEGG: ske:Sked_12380 putative branched-chain amino acid permease
YP_006018719.1	SMART: Helix-turn-helix, AraC domain; KEGG: sse:Ssed_1801 AraC family transcriptional regulator
YP_006018720.1	PFAM: Protein of unknown function DUF2000; KEGG: vfi:VF_1170 hypothetical protein
YP_006018721.1	PFAM: Peptidase M48, Ste24p; KEGG: shw:Sputw3181_3963 peptidase M48, Ste24p
YP_006018722.1	KEGG: shn:Shewana3_0112 hypothetical protein
YP_006018723.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: spc:Sputcn32_0109 glyoxalase/bleomycin resistance protein/dioxygenase
YP_006018724.1	PFAM: Peptidase M23; KEGG: sdn:Sden_2622 peptidase M23B
YP_006018725.1	KEGG: spc:Sputcn32_0110 hypothetical protein
YP_006018726.1	PFAM: Protein of unknown function DUF1090; KEGG: son:SO_0119 hypothetical protein
YP_006018727.1	KEGG: son:SO_0120 hypothetical protein
YP_006018728.1	PFAM: Mechanosensitive ion channel MscS; KEGG: shw:Sputw3181_3954 MscS mechanosensitive ion channel
YP_006018729.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: spc:Sputcn32_0119 lysine exporter protein LysE/YggA
YP_006018730.1	KEGG: shw:Sputw3181_3952 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase
YP_006018731.1	KEGG: shw:Sputw3181_3951 hypothetical protein
YP_006018732.1	PFAM: Protein of unknown function DUF833; KEGG: shw:Sputw3181_3950 hypothetical protein
YP_006018733.1	KEGG: shm:Shewmr7_0117 hypothetical protein
YP_006018734.1	KEGG: shl:Shal_0510 phage integrase family protein
YP_006018735.1	PFAM: Integrase, catalytic core, phage; KEGG: shm:Shewmr7_3888 phage integrase family protein
YP_006018736.1	KEGG: shl:Shal_0512 hypothetical protein
YP_006018737.1	PFAM: Conserved hypothetical protein CHP02293; KEGG: swp:swp_1016 hypothetical protein
YP_006018738.1	PFAM: Filamentation induced by cAMP/death on curing, related; KEGG: pat:Patl_1889 filamentation induced by cAMP protein Fic
YP_006018739.1	manually curated; PFAM: Helix-turn-helix type 3; KEGG: ppr:PBPRA1807 putative transcriptional regulator; SMART: Helix-turn-helix type 3
YP_006018740.1	KEGG: pin:Ping_0146 hypothetical protein
YP_006018741.1	KEGG: ttu:TERTU_3307 helix-turn-helix domain protein
YP_006018742.1	KEGG: vpa:VPA1261 putative ATP-binding protein
YP_006018743.1	KEGG: sfr:Sfri_4014 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911
YP_006018745.1	PFAM: Integrase, catalytic core, phage; KEGG: shw:Sputw3181_2729 phage integrase family protein
YP_006018746.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; KEGG: shn:Shewana3_4015 response regulator receiver modulated diguanylate cyclase; SMART: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region
YP_006018747.1	TIGRFAM: PAS; PFAM: CHASE; PAS fold-4; PAS fold; PAS fold-3; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; ATP-binding region, ATPase-like; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, phosphotransfer (Hpt) region; KEGG: shn:Shewana3_4016 putative PAS/PAC sensor protein; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; PAC motif; Signal transduction response regulator, receiver region
YP_006018748.1	PFAM: Integrase, catalytic core; KEGG: sdn:Sden_2262 integrase catalytic subunit
YP_006018749.1	PFAM: Transposase, IS4-like; KEGG: asa:ASA_P4G164 transposase
YP_006018750.1	KEGG: shn:Shewana3_2016 two component, sigma54 specific, fis family transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core
YP_006018751.1	TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold; HAMP linker domain; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, phosphotransfer (Hpt) region; KEGG: shn:Shewana3_2015 putative PAS/PAC sensor protein; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; HAMP linker domain; PAC motif; Signal transduction response regulator, receiver region
YP_006018752.1	TIGRFAM: Phosphonate-binding periplasmic protein; KEGG: shn:Shewana3_2014 phosphonate ABC transporter, periplasmic phosphonate-binding protein
YP_006018753.1	KEGG: shn:Shewana3_2013 response regulator receiver modulated serine phosphatase; PFAM: Sporulation stage II, protein E C-terminal; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; Protein phosphatase 2C-related
YP_006018754.1	KEGG: shn:Shewana3_2012 putative anti-sigma regulatory factor, serine/threonine protein kinase
YP_006018755.1	KEGG: shn:Shewana3_2011 anti-sigma-factor antagonist; TIGRFAM: Anti-sigma factor antagonist; PFAM: Sulphate transporter/antisigma-factor antagonist STAS
YP_006018756.1	PFAM: Polysaccharide export protein; KEGG: shn:Shewana3_2010 polysaccharide export protein
YP_006018757.1	KEGG: shn:Shewana3_2009 hypothetical protein
YP_006018758.1	KEGG: shn:Shewana3_2008 hypothetical protein
YP_006018759.1	PFAM: Polysaccharide biosynthesis protein; KEGG: shn:Shewana3_2007 polysaccharide biosynthesis protein
YP_006018760.1	PFAM: Glycosyl transferase, family 2; KEGG: shn:Shewana3_2006 glycosyl transferase family protein
YP_006018761.1	KEGG: shn:Shewana3_2005 WecB/TagA/CpsF family glycosyl transferase; TIGRFAM: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; Glycosyl transferase WecB/TagA/CpsF; PFAM: Bacterial sugar transferase; Glycosyl transferase WecB/TagA/CpsF
YP_006018762.1	PFAM: Nucleotidyl transferase; KEGG: shn:Shewana3_2004 nucleotidyl transferase
YP_006018763.1	TIGRFAM: Cytidyltransferase-related; KEGG: shn:Shewana3_2003 glycerol-3-phosphate cytidylyltransferase; PFAM: Cytidylyltransferase
YP_006018764.1	PFAM: CDP-glycerol glycerophosphotransferase; KEGG: shn:Shewana3_2002 peptidyl-dipeptidase A
YP_006018765.1	KEGG: shn:Shewana3_2001 hypothetical protein
YP_006018766.1	KEGG: vvy:VV1938 hypothetical protein
YP_006018767.1	TIGRFAM: M6 metalloprotease; Gammaproteobacterial enzyme, C-terminal transmembrane domain; PFAM: Peptidase M6, immune inhibitor A; PKD; KEGG: shw:Sputw3181_3947 peptidase M6, immune inhibitor A; SMART: PKD
YP_006018768.1	KEGG: shw:Sputw3181_3946 chorismate lyase; PFAM: Chorismate--pyruvate lyase
YP_006018769.1	PFAM: Flagellar basal body-associated protein FliL; KEGG: son:SO_0132 flagellar basal body-associated protein FliL-like protein
YP_006018770.1	HAMAP: Ribosomal RNA large subunit methyltransferase F; KEGG: shw:Sputw3181_3944 putative SAM-dependent methyltransferase; PFAM: S-adenosyl-L-methionine dependent methyltransferase, predicted
YP_006018771.1	PFAM: Protein of unknown function DUF333; KEGG: shn:Shewana3_0128 hypothetical protein
YP_006018772.1	KEGG: shw:Sputw3181_3943 hypothetical protein
YP_006018773.1	KEGG: shw:Sputw3181_3942 molybdopterin biosynthesis protein MoeB; TIGRFAM: Molybdopterin synthase sulfurylase MoeB; PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB
YP_006018774.1	KEGG: shw:Sputw3181_3941 molybdenum cofactor synthesis domain-containing protein; TIGRFAM: Molybdenum cofactor synthesis; PFAM: MoeA, N-terminal region, domain I/II; Molybdopterin binding; MoeA, C-terminal, domain IV
YP_006018775.1	KEGG: shw:Sputw3181_3940 ferritin, Dps family protein; PFAM: Ferritin/Dps protein
YP_006018776.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold; HAMP linker domain; KEGG: shn:Shewana3_0133 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS; PAC motif
YP_006018777.1	TIGRFAM: DHBP synthase RibB; HAMAP: 3,4-dihydroxy-2-butanone 4-phosphate synthase; KEGG: shm:Shewmr7_0129 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: DHBP synthase RibB
YP_006018778.1	KEGG: spc:Sputcn32_0135 oligopeptidase B; PFAM: Peptidase S9A, oligopeptidase, N-terminal beta-propeller; Peptidase S9, prolyl oligopeptidase, catalytic domain
YP_006018779.1	PFAM: Excinuclease ABC, C subunit, N-terminal; KEGG: she:Shewmr4_0137 excinuclease ABC subunit C
YP_006018780.1	PFAM: Protein of unknown function DUF541; KEGG: saz:Sama_3310 hypothetical protein
YP_006018781.1	KEGG: swd:Swoo_0681 phenylacetic acid degradation-related protein
YP_006018782.1	KEGG: shw:Sputw3181_3928 putative lipoprotein
YP_006018783.1	PFAM: Methyltransferase type 12; KEGG: shw:Sputw3181_3927 methyltransferase type 12
YP_006018784.1	KEGG: she:Shewmr4_0145 peptidase M14, carboxypeptidase A; PFAM: Peptidase M14, carboxypeptidase A; SMART: Peptidase M14, carboxypeptidase A
YP_006018785.1	KEGG: shw:Sputw3181_3925 hypothetical protein
YP_006018786.1	PFAM: Sodium:dicarboxylate symporter; KEGG: shw:Sputw3181_3924 sodium:dicarboxylate symporter
YP_006018787.1	PFAM: Phosphoenolpyruvate carboxykinase, ATP-utilising; TIGRFAM: Phosphoenolpyruvate carboxykinase, ATP-utilising; HAMAP: Phosphoenolpyruvate carboxykinase [ATP]; KEGG: shw:Sputw3181_3708 phosphoenolpyruvate carboxykinase
YP_006018788.1	KEGG: shw:Sputw3181_3707 HSP33-like chaperonin; HAMAP: Heat shock protein Hsp33 protein; PFAM: Heat shock protein Hsp33 protein
YP_006018789.1	KEGG: shw:Sputw3181_3706 RNA-binding S4 domain-containing protein; PFAM: RNA-binding S4; SMART: RNA-binding S4
YP_006018791.1	TIGRFAM: Type II secretion system protein C; KEGG: she:Shewmr4_0155 general secretion pathway protein C
YP_006018792.1	KEGG: shm:Shewmr7_0151 general secretion pathway protein D; TIGRFAM: Type II secretion system gspD; PFAM: Type II/III secretion system; NolW-like
YP_006018793.1	TIGRFAM: Type II secretion system gspE; PFAM: Type II secretion system protein E; KEGG: shw:Sputw3181_3703 general secretory pathway protein E; SMART: ATPase, AAA+ type, core
YP_006018794.1	KEGG: shw:Sputw3181_3702 general secretion pathway protein F; TIGRFAM: General secretion pathway protein F; PFAM: Type II secretion system F domain
YP_006018795.1	KEGG: shn:Shewana3_0154 general secretion pathway protein G; TIGRFAM: General secretion pathway protein G; Prepilin-type cleavage/methylation, N-terminal; PFAM: Type II secretion system protein G; Prepilin-type cleavage/methylation, N-terminal
YP_006018796.1	KEGG: son:SO_0170 general secretion pathway protein H; manually curated; TIGRFAM: General secretion pathway protein H; Prepilin-type cleavage/methylation, N-terminal
YP_006018797.1	KEGG: shm:Shewmr7_0156 general secretion pathway protein I; TIGRFAM: General secretion pathway protein I; Prepilin-type cleavage/methylation, N-terminal; PFAM: Type II secretion system protein I/J; Prepilin-type cleavage/methylation, N-terminal
YP_006018798.1	TIGRFAM: General secretion pathway protein J; Prepilin-type cleavage/methylation, N-terminal; KEGG: shm:Shewmr7_0157 general secretion pathway protein J
YP_006018799.1	KEGG: shn:Shewana3_0158 general secretion pathway protein K
YP_006018801.1	KEGG: shn:Shewana3_0159 general secretion pathway protein L; TIGRFAM: General secretion pathway L; PFAM: General secretion pathway L
YP_006018802.1	PFAM: General secretion pathway M protein; KEGG: shn:Shewana3_0160 general secretion pathway M protein
YP_006018803.1	PFAM: Type II secretion system protein N; KEGG: shn:Shewana3_0161 type II secretion system protein N
YP_006018804.1	KEGG: shw:Sputw3181_3693 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase
YP_006018805.1	PFAM: Aspartyl/Asparaginyl beta-hydroxylase; KEGG: shn:Shewana3_0163 aspartyl/asparaginyl beta-hydroxylase
YP_006018806.1	PFAM: Phytanoyl-CoA dioxygenase; KEGG: son:SO_0180 hypothetical protein
YP_006018807.1	KEGG: shn:Shewana3_0165 hypothetical protein
YP_006018808.1	PFAM: GCN5-related N-acetyltransferase; KEGG: spc:Sputcn32_3552 GCN5-related N-acetyltransferase
YP_006018809.1	PFAM: Phage Tail Collar; KEGG: spc:Sputcn32_3551 phage tail collar domain-containing protein
YP_006018810.1	TIGRFAM: VCBS repeat domain; PFAM: Putative Ig; Fibronectin, type III; Outer membrane protein, OmpA-like, transmembrane region; KEGG: spc:Sputcn32_3550 fibronectin, type III domain-containing protein; SMART: Fibronectin, type III; LamG-like jellyroll fold; Dystroglycan-type cadherin-like
YP_006018811.1	PFAM: NUDIX hydrolase domain; KEGG: shw:Sputw3181_3686 ADP-ribose diphosphatase NudE
YP_006018812.1	KEGG: spc:Sputcn32_3548 3'(2'),5'-bisphosphate nucleotidase; TIGRFAM: 3(2),5 -bisphosphate nucleotidase, bacterial; PFAM: Inositol monophosphatase
YP_006018813.1	PFAM: GCN5-related N-acetyltransferase; KEGG: shw:Sputw3181_3684 GCN5-related N-acetyltransferase
YP_006018814.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: shw:Sputw3181_3683 TetR family transcriptional regulator
YP_006018815.1	KEGG: shw:Sputw3181_3682 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase
YP_006018816.1	TIGRFAM: tRNA 2-selenouridine synthase; HAMAP: tRNA 2-selenouridine synthase; KEGG: shw:Sputw3181_3681 tRNA 2-selenouridine synthase; SMART: Rhodanese-like
YP_006018817.1	TIGRFAM: Selenide water dikinase; HAMAP: Selenide, water dikinase; KEGG: shw:Sputw3181_3680 selenophosphate synthetase; PFAM: AIR synthase related protein; AIR synthase related protein, C-terminal
YP_006018818.1	KEGG: shw:Sputw3181_3679 stearoyl-CoA 9-desaturase; PFAM: Fatty acid desaturase, type 1
YP_006018819.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: shw:Sputw3181_3678 DNA-binding transcriptional repressor FabR
YP_006018820.1	TIGRFAM: tRNA (uracil-5-)-methyltransferase; HAMAP: tRNA (uracil-5-)-methyltransferase; KEGG: shw:Sputw3181_3677 tRNA (uracil-5-)-methyltransferase; PFAM: (Uracil-5)-methyltransferase
YP_006018821.1	PFAM: Asp/Glu/hydantoin racemase; TIGRFAM: Glutamate racemase; HAMAP: Glutamate racemase; KEGG: shn:Shewana3_0180 glutamate racemase
YP_006018822.1	KEGG: shm:Shewmr7_0175 RNP-1 like RNA-binding protein; PFAM: RNA recognition motif, RNP-1; SMART: RNA recognition motif, RNP-1
YP_006018823.1	KEGG: son:SO_3573 hypothetical protein
YP_006018824.1	PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal; FAD linked oxidase, N-terminal; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; HAMAP: UDP-N-acetylenolpyruvoylglucosamine reductase; KEGG: shw:Sputw3181_0139 UDP-N-acetylenolpyruvoylglucosamine reductase
YP_006018825.1	TIGRFAM: Biotin--acetyl-CoA-carboxylase ligase; KEGG: shw:Sputw3181_0140 biotin--protein ligase; PFAM: Biotin/lipoate A/B protein ligase; Helix-turn-helix, type 11; Biotin protein ligase, C-terminal
YP_006018826.1	PFAM: Phosphoribulokinase/uridine kinase; TIGRFAM: Bacterial pantothenate kinase; HAMAP: Pantothenate kinase; KEGG: shw:Sputw3181_0141 pantothenate kinase
YP_006018827.1	KEGG: shw:Sputw3181_0154 elongation factor Tu; TIGRFAM: Translation elongation factor EFTu/EF1A, bacterial/organelle; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFTu/EF1A, C-terminal
YP_006018828.1	KEGG: shw:Sputw3181_0143 preprotein translocase subunit SecE; TIGRFAM: SecE subunit of protein translocation complex; PFAM: Protein secE/sec61-gamma protein
YP_006018829.1	TIGRFAM: Transcription antitermination protein, NusG; PFAM: Transcription antitermination protein, NusG, N-terminal; KOW; KEGG: shw:Sputw3181_0144 NusG antitermination factor; SMART: Transcription antitermination protein, NusG, N-terminal; KOW
YP_006018830.1	TIGRFAM: Ribosomal protein L11, bacterial-type; PFAM: Ribosomal protein L11, N-terminal; Ribosomal protein L11, C-terminal; KEGG: shn:Shewana3_0188 50S ribosomal protein L11; SMART: Ribosomal protein L11
YP_006018831.1	KEGG: son:SO_0221 50S ribosomal protein L1; TIGRFAM: Ribosomal protein L1, bacterial-type; PFAM: Ribosomal protein L1
YP_006018832.1	KEGG: shw:Sputw3181_0147 50S ribosomal protein L10; HAMAP: 50S ribosomal protein L10; PFAM: Ribosomal protein L10
YP_006018833.1	TIGRFAM: Ribosomal protein L7/L12; HAMAP: Ribosomal protein L7/L12; KEGG: shw:Sputw3181_0148 50S ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12, C-terminal
YP_006018834.1	TIGRFAM: DNA-directed RNA polymerase, beta subunit, bacterial-type; HAMAP: DNA-directed RNA polymerase subunit beta; KEGG: shw:Sputw3181_0149 DNA-directed RNA polymerase subunit beta; PFAM: DNA-directed RNA polymerase, subunit 2, domain 6; RNA polymerase Rpb2, domain 3; RNA polymerase, beta subunit, protrusion; RNA polymerase Rpb2, domain 2; DNA-directed RNA polymerase, beta subunit, external 1 domain; RNA polymerase Rpb2, domain 7
YP_006018835.1	SMART: RNA polymerase, N-terminal; TIGRFAM: DNA-directed RNA polymerase, subunit beta-prime; KEGG: shw:Sputw3181_0150 DNA-directed RNA polymerase subunit beta'; HAMAP: DNA-directed RNA polymerase subunit beta'; PFAM: RNA polymerase Rpb1, domain 1; RNA polymerase, alpha subunit; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 5
YP_006018836.1	KEGG: shm:Shewmr7_0189 30S ribosomal protein S12; TIGRFAM: Ribosomal protein S12, bacterial-type; PFAM: Ribosomal protein S12/S23
YP_006018837.1	KEGG: sfr:Sfri_0144 30S ribosomal protein S7; TIGRFAM: Ribosomal protein S7, bacterial-type; PFAM: Ribosomal protein S7
YP_006018838.1	KEGG: shw:Sputw3181_0153 elongation factor G; TIGRFAM: Translation elongation factor EFG/EF2; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal
YP_006018839.1	KEGG: shw:Sputw3181_0154 elongation factor Tu; TIGRFAM: Translation elongation factor EFTu/EF1A, bacterial/organelle; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFTu/EF1A, C-terminal
YP_006018840.1	TIGRFAM: Ribosomal protein S10, bacterial; HAMAP: 30S ribosomal protein S10; KEGG: shw:Sputw3181_0155 30S ribosomal protein S10; PFAM: Ribosomal protein S10
YP_006018841.1	KEGG: shw:Sputw3181_0156 50S ribosomal protein L3; TIGRFAM: Ribosomal protein L3, bacterial/organelle-type; PFAM: Ribosomal protein L3
YP_006018842.1	PFAM: Ribosomal protein L4/L1e; KEGG: shw:Sputw3181_0157 50S ribosomal protein L4
YP_006018843.1	PFAM: Ribosomal protein L25/L23; KEGG: shw:Sputw3181_0158 50S ribosomal protein L23
YP_006018844.1	KEGG: shw:Sputw3181_0159 50S ribosomal protein L2; TIGRFAM: Ribosomal protein L2, bacterial-type; PFAM: Ribosomal protein L2
YP_006018845.1	KEGG: svo:SVI_4158 30S ribosomal protein S19; TIGRFAM: Ribosomal protein S19, bacterial-type; PFAM: Ribosomal protein S19/S15
YP_006018846.1	KEGG: shw:Sputw3181_0161 50S ribosomal protein L22; TIGRFAM: Ribosomal protein L22, bacterial-type; PFAM: Ribosomal protein L22/L17
YP_006018847.1	TIGRFAM: Ribosomal protein S3, bacterial; PFAM: Ribosomal protein S3, C-terminal; Ribosomal protein S3, N-terminal; K Homology, type 2; KEGG: shw:Sputw3181_0162 30S ribosomal protein S3; SMART: K Homology
YP_006018848.1	TIGRFAM: Ribosomal protein L16; HAMAP: Ribosomal protein L16; KEGG: shw:Sputw3181_0163 50S ribosomal protein L16; PFAM: Ribosomal protein L10e/L16
YP_006018849.1	KEGG: sfr:Sfri_0156 50S ribosomal protein L29; TIGRFAM: Ribosomal protein L29; PFAM: Ribosomal protein L29
YP_006018850.1	KEGG: shw:Sputw3181_0165 30S ribosomal protein S17; TIGRFAM: Ribosomal protein S17, bacterial-type; PFAM: Ribosomal protein S17
YP_006018851.1	KEGG: shw:Sputw3181_0166 50S ribosomal protein L14; TIGRFAM: Ribosomal protein L14, bacterial-type; PFAM: Ribosomal protein L14b/L23e
YP_006018852.1	TIGRFAM: Ribosomal protein L24; PFAM: KOW; KEGG: shw:Sputw3181_0167 50S ribosomal protein L24; SMART: KOW
YP_006018853.1	PFAM: Ribosomal protein L5; KEGG: sfr:Sfri_0160 50S ribosomal protein L5
YP_006018854.1	KEGG: shn:Shewana3_0212 30S ribosomal protein S14; HAMAP: 30S ribosomal protein S14; PFAM: Ribosomal protein S14
YP_006018855.1	PFAM: Ribosomal protein S8; KEGG: shw:Sputw3181_0170 30S ribosomal protein S8
YP_006018856.1	KEGG: shw:Sputw3181_0171 50S ribosomal protein L6; TIGRFAM: Ribosomal protein L6, bacterial-type; PFAM: Ribosomal protein L6, alpha-beta domain
YP_006018857.1	KEGG: shw:Sputw3181_0172 50S ribosomal protein L18; TIGRFAM: Ribosomal protein L18, bacterial; PFAM: Ribosomal protein L18/L5
YP_006018858.1	KEGG: shw:Sputw3181_0173 30S ribosomal protein S5; TIGRFAM: Ribosomal protein S5, bacterial-type; PFAM: Ribosomal protein S5, N-terminal; Ribosomal protein S5, C-terminal
YP_006018859.1	KEGG: shw:Sputw3181_0174 50S ribosomal protein L30; TIGRFAM: Ribosomal protein L30, bacterial-type; PFAM: Ribosomal protein L30p/L7e, conserved region
YP_006018860.1	KEGG: shw:Sputw3181_0175 50S ribosomal protein L15; TIGRFAM: Ribosomal protein L15, bacterial-type; PFAM: Ribosomal protein L15
YP_006018861.1	KEGG: shn:Shewana3_0219 preprotein translocase subunit SecY; TIGRFAM: SecY protein; PFAM: SecY protein
YP_006018862.1	PFAM: Ribosomal protein L36; manually curated; TIGRFAM: Ribosomal protein L36; KEGG: swp:swp_2032 50S ribosomal protein L36; HAMAP: Ribosomal protein L36
YP_006018863.1	KEGG: shw:Sputw3181_0178 30S ribosomal protein S13; TIGRFAM: Ribosomal protein S13, bacterial-type; PFAM: Ribosomal protein S13
YP_006018864.1	KEGG: shw:Sputw3181_0179 30S ribosomal protein S11; TIGRFAM: Ribosomal protein S11, bacterial-type; PFAM: Ribosomal protein S11
YP_006018865.1	TIGRFAM: Ribosomal protein S4, bacterial-type; PFAM: Ribosomal protein S4; RNA-binding S4; KEGG: shw:Sputw3181_0180 30S ribosomal protein S4; SMART: RNA-binding S4
YP_006018866.1	SMART: DNA-directed RNA polymerase, RpoA/D/Rpb3-type; TIGRFAM: DNA-directed RNA polymerase, alpha subunit; KEGG: shw:Sputw3181_0181 DNA-directed RNA polymerase subunit alpha; HAMAP: DNA-directed RNA polymerase, alpha subunit; PFAM: DNA-directed RNA polymerase, insert; DNA-directed RNA polymerase, dimerisation; RNA polymerase, alpha subunit, C-terminal
YP_006018867.1	TIGRFAM: Ribosomal protein L17; HAMAP: 50S ribosomal protein L17; KEGG: shw:Sputw3181_0182 50S ribosomal protein L17; PFAM: Ribosomal protein L17
YP_006018868.1	PFAM: Transposase, IS4-like; KEGG: son:SO_1008 transposase, putative
YP_006018869.1	TIGRFAM: Formate dehydrogenase, gamma subunit; KEGG: shw:Sputw3181_3877 formate dehydrogenase, gamma subunit
YP_006018870.1	PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: shw:Sputw3181_3876 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_006018871.1	KEGG: shm:Shewmr7_3795 formate dehydrogenase alpha subunit; PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 region; Molydopterin dinucleotide-binding region
YP_006018872.1	TIGRFAM: Formate dehydrogenase, TAT signal-containing; Twin-arginine translocation pathway, signal sequence; KEGG: shn:Shewana3_3919 hypothetical protein
YP_006018873.1	TIGRFAM: Formate dehydrogenase, gamma subunit; KEGG: spc:Sputcn32_0335 formate dehydrogenase, gamma subunit
YP_006018874.1	PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: shn:Shewana3_3917 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_006018875.1	KEGG: she:Shewmr4_3720 formate dehydrogenase alpha subunit; PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 region; Molydopterin dinucleotide-binding region
YP_006018876.1	TIGRFAM: Formate dehydrogenase, TAT signal-containing; Twin-arginine translocation pathway, signal sequence; KEGG: shn:Shewana3_3915 hypothetical protein
YP_006018877.1	KEGG: shw:Sputw3181_3869 cytoplasmic chaperone TorD family protein
YP_006018878.1	PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: shw:Sputw3181_3868 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_006018879.1	KEGG: shw:Sputw3181_3867 hypothetical protein
YP_006018880.1	KEGG: shm:Shewmr7_3786 hypothetical protein
YP_006018881.1	PFAM: Formate dehydrogenase, subunit FdhD; KEGG: shw:Sputw3181_3865 formate dehydrogenase, subunit FdhD
YP_006018882.1	TIGRFAM: Excisionase/Xis, DNA-binding; KEGG: shw:Sputw3181_3864 DNA binding domain-containing protein
YP_006018883.1	PFAM: GCN5-related N-acetyltransferase; KEGG: asa:ASA_3887 acetyltransferase
YP_006018884.1	KEGG: son:SO_0272 competence/damage-inducible protein CinA; TIGRFAM: Competence-induced protein CinA; CinA, C-terminal; PFAM: CinA, C-terminal; Molybdopterin binding
YP_006018885.1	PFAM: Protein of unknown function DUF1439; KEGG: spc:Sputcn32_3719 hypothetical protein
YP_006018886.1	HAMAP: Phosphoenolpyruvate carboxylase; KEGG: spc:Sputcn32_3718 phosphoenolpyruvate carboxylase; PFAM: Phosphoenolpyruvate carboxylase
YP_006018887.1	PFAM: Semialdehyde dehydrogenase, NAD-binding; Semialdehyde dehydrogenase, dimerisation region; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; HAMAP: N-acetyl-gamma-glutamyl-phosphate reductase; KEGG: shw:Sputw3181_3860 N-acetyl-gamma-glutamyl-phosphate reductase
YP_006018888.1	TIGRFAM: Acetylglutamate kinase; KEGG: shw:Sputw3181_3859 acetylglutamate kinase; PFAM: Aspartate/glutamate/uridylate kinase
YP_006018889.1	TIGRFAM: Ornithine carbamoyltransferase; KEGG: shw:Sputw3181_3858 ornithine carbamoyltransferase; PFAM: Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding
YP_006018890.1	PFAM: Argininosuccinate synthase; TIGRFAM: Argininosuccinate synthase; HAMAP: Argininosuccinate synthase; KEGG: son:SO_0278 argininosuccinate synthase
YP_006018891.1	PFAM: Fumarate lyase; TIGRFAM: Argininosuccinate lyase; HAMAP: Argininosuccinate lyase; KEGG: shw:Sputw3181_3856 argininosuccinate lyase
YP_006018892.1	TIGRFAM: Penicillin-binding protein 1A; KEGG: shm:Shewmr7_0241 1A family penicillin-binding protein; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase
YP_006018893.1	KEGG: shm:Shewmr7_0242 type IV pilus assembly protein PilM; manually curated; TIGRFAM: Type IV pilus assembly protein PilM
YP_006018894.1	PFAM: Fimbrial assembly; KEGG: shm:Shewmr7_0243 fimbrial assembly family protein
YP_006018895.1	PFAM: Pilus assembly protein, PilO; KEGG: shw:Sputw3181_3850 pilus assembly protein, PilO
YP_006018896.1	PFAM: Pilus assembly protein PilP; KEGG: shn:Shewana3_3896 methyl-accepting chemotaxis sensory transducer
YP_006018897.1	KEGG: shn:Shewana3_3895 type IV pilus secretin PilQ; TIGRFAM: Type IV pilus secretin PilQ; PFAM: Type II/III secretion system; NolW-like; Secretin/TonB, short N-terminal
YP_006018898.1	HAMAP: Shikimate kinase; KEGG: shn:Shewana3_3894 shikimate kinase I; PFAM: Shikimate kinase
YP_006018899.1	PFAM: 3-dehydroquinate synthase AroB; TIGRFAM: 3-dehydroquinate synthase AroB, subgroup; HAMAP: 3-dehydroquinate synthase; KEGG: shw:Sputw3181_3846 3-dehydroquinate synthase
YP_006018900.1	PFAM: Sporulation/cell division region, bacteria; KEGG: spc:Sputcn32_3704 sporulation domain-containing protein
YP_006018901.1	KEGG: shw:Sputw3181_3844 DNA adenine methylase; TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase
YP_006018902.1	KEGG: son:SO_0290 hypothetical protein
YP_006018903.1	KEGG: shm:Shewmr7_0252 hypothetical protein
YP_006018904.1	TIGRFAM: Ribulose-phosphate 3-epimerase; KEGG: shw:Sputw3181_3842 ribulose-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3-epimerase
YP_006018905.1	PFAM: Haloacid dehalogenase-like hydrolase; TIGRFAM: 2-phosphoglycolate phosphatase, prokaryotic; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; HAMAP: Phosphoglycolate phosphatase; KEGG: shw:Sputw3181_3841 phosphoglycolate phosphatase
YP_006018906.1	TIGRFAM: Tryptophanyl-tRNA synthetase, class Ib; KEGG: shw:Sputw3181_3840 tryptophanyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ib
YP_006018907.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: shw:Sputw3181_3839 LysR family transcriptional regulator
YP_006018908.1	PFAM: Protein of unknown function DUF6, transmembrane; KEGG: shw:Sputw3181_3838 hypothetical protein
YP_006018909.1	PFAM: Transport-associated; KEGG: shw:Sputw3181_3837 transport-associated
YP_006018910.1	HAMAP: Phosphoheptose isomerase; KEGG: shw:Sputw3181_3836 phosphoheptose isomerase
YP_006018911.1	TIGRFAM: Uncharacterised protein family UPF0102; HAMAP: Uncharacterised protein family UPF0102; KEGG: shw:Sputw3181_3835 hypothetical protein; PFAM: Uncharacterised protein family UPF0102
YP_006018912.1	PFAM: LppC putative lipoprotein; KEGG: shm:Shewmr7_0261 LppC family lipoprotein
YP_006018913.1	TIGRFAM: Uncharacterised protein family UPF0011; HAMAP: Ribosomal RNA small subunit methyltransferase I; KEGG: shw:Sputw3181_3833 uroporphyrin-III C/tetrapyrrole methyltransferase; PFAM: Tetrapyrrole methylase
YP_006018914.1	PFAM: Protein of unknown function DUF883, ElaB; KEGG: spc:Sputcn32_3690 hypothetical protein
YP_006018915.1	KEGG: shw:Sputw3181_3831 putative orphan protein
YP_006018916.1	KEGG: spc:Sputcn32_3688 hypothetical protein
YP_006018917.1	KEGG: shn:Shewana3_3877 hypothetical protein
YP_006018918.1	KEGG: shn:Shewana3_3876 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF1212
YP_006018919.1	KEGG: shw:Sputw3181_3825 hypothetical protein
YP_006018920.1	HAMAP: UPF0313 protein ygiQ; PFAM: Radical SAM N-terminal; Radical SAM; KEGG: shw:Sputw3181_3824 hypothetical protein; SMART: Elongator protein 3/MiaB/NifB
YP_006018921.1	manually curated; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; KEGG: tau:Tola_0775 transcriptional regulator, LacI family; SMART: HTH transcriptional regulator, LacI
YP_006018922.1	KEGG: pha:PSHAb0479 low affinity gluconate transporter; TIGRFAM: Gluconate transporter; PFAM: Gluconate transporter
YP_006018923.1	TIGRFAM: Carbohydrate kinase, thermoresistant glucokinase; KEGG: dda:Dd703_1226 carbohydrate kinase, thermoresistant glucokinase family; PFAM: Shikimate kinase
YP_006018924.1	PFAM: Porin, Gram-negative type; KEGG: shn:Shewana3_3873 porin
YP_006018925.1	KEGG: shw:Sputw3181_3822 putrescine transporter; TIGRFAM: Arginine/ornithine antiporter; PFAM: Amino acid permease-associated region
YP_006018926.1	KEGG: shw:Sputw3181_3821 ornithine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase, major region; Orn/Lys/Arg decarboxylase, N-terminal; Orn/Lys/Arg decarboxylase, C-terminal
YP_006018927.1	manually curated; KEGG: shw:Sputw3181_3819 hypothetical protein
YP_006018929.1	KEGG: shn:Shewana3_3869 PBP family phospholipid-binding protein; TIGRFAM: YbhB/YbcL; PFAM: Phosphatidylethanolamine-binding protein PEBP
YP_006018930.1	KEGG: shm:Shewmr7_0281 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_006018931.1	PFAM: Protein of unknown function DUF1232; KEGG: shn:Shewana3_3867 hypothetical protein
YP_006018932.1	KEGG: shw:Sputw3181_3817 hypothetical protein
YP_006018933.1	PFAM: Acyltransferase 3; KEGG: she:Shewmr4_3653 acyltransferase 3
YP_006018934.1	KEGG: shw:Sputw3181_3815 hypothetical protein
YP_006018935.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pfl:PFL_2190 PhnO-related protein
YP_006018936.1	PFAM: Cytochrome c assembly protein, transmembrane region; KEGG: hch:HCH_03335 thiol:disulfide interchange protein
YP_006018937.1	PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: hch:HCH_03334 thiol-disulfide isomerase-like protein
YP_006018938.1	KEGG: axy:AXYL_03214 NADPH-dependent FMN reductase family protein 1; HAMAP: FMN-dependent NADH-azoreductase; PFAM: Flavodoxin-like fold
YP_006018939.1	KEGG: rlg:Rleg_0024 transcriptional regulator, GntR family with aminotransferase domain; PFAM: HTH transcriptional regulator, GntR; Aminotransferase, class I/II; SMART: HTH transcriptional regulator, GntR
YP_006018940.1	KEGG: pmr:PMI2151 hypothetical protein; TIGRFAM: Phenazine biosynthesis PhzC/PhzF protein; PFAM: Phenazine biosynthesis PhzC/PhzF protein
YP_006018941.1	KEGG: vsp:VS_1892 hypothetical protein
YP_006018942.1	KEGG: shw:Sputw3181_3806 hypothetical protein
YP_006018943.1	KEGG: spc:Sputcn32_3664 hypothetical protein
YP_006018944.1	KEGG: shw:Sputw3181_3804 hypothetical protein
YP_006018945.1	PFAM: Sulphur relay, DsrE-like protein; KEGG: shn:Shewana3_3844 DsrE family protein
YP_006018946.1	KEGG: shw:Sputw3181_3802 hypothetical protein
YP_006018947.1	KEGG: shw:Sputw3181_3801 hypothetical protein
YP_006018948.1	KEGG: spc:Sputcn32_3659 hypothetical protein; HAMAP: UPF0061 protein ydiU; PFAM: Uncharacterised protein family UPF0061
YP_006018949.1	KEGG: shw:Sputw3181_3799 hypothetical protein
YP_006018950.1	PFAM: Aminoglycoside phosphotransferase; KEGG: spc:Sputcn32_3657 serine/threonine protein kinase
YP_006018951.1	PFAM: DSBA oxidoreductase; KEGG: shm:Shewmr7_0302 DsbA oxidoreductase
YP_006018953.1	PFAM: Protein of unknown function DUF1107; KEGG: shw:Sputw3181_3796 hypothetical protein
YP_006018954.1	KEGG: shw:Sputw3181_3795 hypothetical protein; HAMAP: Cell division protein ZapB; PFAM: Cell division protein ZapB
YP_006018955.1	PFAM: Na+/H+ antiporter NhaC-like; KEGG: spc:Sputcn32_3653 Na+/H+ antiporter NhaC
YP_006018956.1	PFAM: Endoribonuclease L-PSP; KEGG: shw:Sputw3181_3793 endoribonuclease L-PSP
YP_006018957.1	KEGG: spc:Sputcn32_3651 hypothetical protein
YP_006018958.1	PFAM: Modulator of Rho-dependent transcription termination; KEGG: shw:Sputw3181_3791 transcriptional antiterminator, Rof
YP_006018959.1	TIGRFAM: Branched-chain amino acid aminotransferase II; KEGG: shw:Sputw3181_3790 branched-chain amino acid aminotransferase; PFAM: Aminotransferase, class IV
YP_006018960.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; Two component regulator three Y; Two component regulator propeller; PAS fold-3; PAS fold; KEGG: shw:Sputw3181_3789 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS; PAC motif
YP_006018961.1	PFAM: Isocitrate lyase/phosphorylmutase; KEGG: shw:Sputw3181_3788 isocitrate lyase family protein
YP_006018962.1	KEGG: shw:Sputw3181_3787 putative AcnD-accessory protein PrpF; TIGRFAM: PrpF, AcnD-accessory; PFAM: PrpF protein
YP_006018963.1	TIGRFAM: 2-methylisocitrate dehydratase AcnD, Fe/S-dependent; KEGG: spc:Sputcn32_3646 aconitate hydratase; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; Aconitase A/isopropylmalate dehydratase small subunit, swivel
YP_006018964.1	TIGRFAM: 2-methylcitrate synthase/citrate synthase type I; KEGG: shw:Sputw3181_3785 methylcitrate synthase; PFAM: Citrate synthase-like
YP_006018965.1	TIGRFAM: Methylisocitrate lyase; KEGG: shw:Sputw3181_3784 2-methylisocitrate lyase; PFAM: Isocitrate lyase/phosphorylmutase
YP_006018966.1	KEGG: shw:Sputw3181_3783 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR
YP_006018967.1	PFAM: Protein of unknown function DUF523; KEGG: shw:Sputw3181_3782 hypothetical protein
YP_006018968.1	KEGG: shw:Sputw3181_3781 putative acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase
YP_006018969.1	KEGG: shw:Sputw3181_3780 putative acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase
YP_006018970.1	TIGRFAM: Mg chelatase-related protein; PFAM: Magnesium chelatase, ChlI subunit; KEGG: spc:Sputcn32_3639 Mg chelatase, subunit ChlI; SMART: ATPase, AAA+ type, core
YP_006018971.1	PFAM: Protein of unknown function DUF1963; KEGG: shn:Shewana3_3819 hypothetical protein
YP_006018972.1	KEGG: shn:Shewana3_0349 periplasmic sugar-binding protein, putative
YP_006018973.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; GAF; KEGG: shn:Shewana3_0350 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_006018974.1	PFAM: Extracellular solute-binding protein, family 3; KEGG: shn:Shewana3_0352 amino acid ABC transporter periplasmic protein
YP_006018975.1	PFAM: Protein of unknown function DUF21; Cystathionine beta-synthase, core; Transporter-associated region; KEGG: shw:Sputw3181_3757 hypothetical protein
YP_006018976.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: shw:Sputw3181_3756 DNA-binding transcriptional regulator IlvY
YP_006018977.1	TIGRFAM: Acetohydroxy acid isomeroreductase; KEGG: spc:Sputcn32_3615 ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase C-terminal; Acetohydroxy acid isomeroreductase, catalytic
YP_006018978.1	TIGRFAM: Acetolactate synthase, large subunit, biosynthetic; KEGG: shw:Sputw3181_3754 acetolactate synthase 2 catalytic subunit; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding region; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Thiamine pyrophosphate enzyme, central region
YP_006018979.1	KEGG: shw:Sputw3181_3753 acetolactate synthase 2 regulatory subunit
YP_006018980.1	PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase; TIGRFAM: Dihydroxy-acid dehydratase; HAMAP: Dihydroxy-acid dehydratase; KEGG: spc:Sputcn32_3612 dihydroxy-acid dehydratase
YP_006018981.1	KEGG: spc:Sputcn32_3611 threonine dehydratase; TIGRFAM: Threonine dehydratase I; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; Threonine dehydratase, C-terminal
YP_006018982.1	KEGG: spc:Sputcn32_3610 alanine--glyoxylate transaminase; PFAM: Aminotransferase, class V/Cysteine desulfurase
YP_006018983.1	KEGG: son:SO_4342 hypothetical protein
YP_006018985.1	KEGG: hse:Hsero_1548 hypothetical protein
YP_006018986.1	KEGG: bam:Bamb_0911 hypothetical protein
YP_006018987.1	PFAM: Mitochondrial inner membrane translocase complex, subunit Tim44-related; KEGG: shw:Sputw3181_3746 import inner membrane translocase, subunit Tim44
YP_006018988.1	PFAM: Sodium:neurotransmitter symporter; KEGG: son:SO_4339 sodium-dependent transporter, putative
YP_006018989.1	KEGG: son:SO_4337 AsnC family transcriptional regulator; PFAM: Transcription regulator, AsnC-type, C-terminal; HTH transcriptional regulator, MarR; SMART: Transcription regulator, AsnC-type
YP_006018990.1	PFAM: Extracellular solute-binding protein, family 3; KEGG: saz:Sama_3276 ABC-type amino acid transport/signal transduction system
YP_006018991.1	KEGG: shw:Sputw3181_3745 phosphoesterase, PA-phosphatase related; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase
YP_006018992.1	PFAM: Uncharacterised protein family, inner membrane CreD; KEGG: spc:Sputcn32_3605 hypothetical protein
YP_006018993.1	KEGG: shn:Shewana3_0366 hypothetical protein
YP_006018994.1	PFAM: Protein of unknown function DUF1006; KEGG: she:Shewmr4_0372 hypothetical protein
YP_006018995.1	KEGG: she:Shewmr4_0373 hypothetical protein
YP_006018996.1	KEGG: spc:Sputcn32_3601 hypothetical protein
YP_006018997.1	PFAM: Protein of unknown function DUF526; KEGG: shw:Sputw3181_3740 hypothetical protein
YP_006018998.1	KEGG: spc:Sputcn32_3599 ATP-dependent DNA helicase Rep; TIGRFAM: DNA helicase, ATP-dependent, RepA type; PFAM: DNA helicase, UvrD/REP type
YP_006018999.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; GAF; Diguanylate phosphodiesterase, predicted; KEGG: shw:Sputw3181_3738 diguanylate cyclase/phosphodiesterase with GAF sensor; SMART: Diguanylate cyclase, predicted; GAF; Diguanylate phosphodiesterase, predicted
YP_006019000.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; HAMP linker domain; Diguanylate cyclase, predicted; KEGG: shw:Sputw3181_3737 diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; HAMP linker domain
YP_006019001.1	KEGG: shw:Sputw3181_3736 hypothetical protein
YP_006019002.1	PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: she:Shewmr4_0380 OmpA/MotB domain-containing protein
YP_006019003.1	KEGG: shm:Shewmr7_3645 TolC family type I secretion outer membrane protein; TIGRFAM: Type I secretion outer membrane protein, TolC; PFAM: Outer membrane efflux protein
YP_006019004.1	KEGG: spc:Sputcn32_3593 HlyD family type I secretion membrane fusion protein; TIGRFAM: Type I secretion membrane fusion protein, HlyD; PFAM: Secretion protein HlyD
YP_006019005.1	SMART: ATPase, AAA+ type, core; TIGRFAM: ATPase, type I secretion system; KEGG: she:Shewmr4_0383 ABC transporter related; PFAM: ABC transporter-like; ABC transporter, transmembrane region; Peptidase C39, bacteriocin processing
YP_006019006.1	TIGRFAM: VCBS repeat domain; Type 1 secretion, target domain, C-terminal; PFAM: von Willebrand factor, type A; Haemolysin-type calcium-binding region; KEGG: aha:AHA_3491 hypothetical protein; SMART: von Willebrand factor, type A
YP_006019007.1	TIGRFAM: VCBS repeat domain; KEGG: sdn:Sden_0384 hypothetical protein
YP_006019008.1	PFAM: HemY, N-terminal; KEGG: shw:Sputw3181_3729 HemY domain-containing protein
YP_006019009.1	KEGG: she:Shewmr4_0386 protein of unknown function DUF513, HemX; PFAM: HemX
YP_006019010.1	PFAM: Tetrapyrrole biosynthesis, uroporphyrinogen III synthase; KEGG: son:SO_4314 uroporphyrinogen-III synthase
YP_006019011.1	KEGG: son:SO_4313 porphobilinogen deaminase; TIGRFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; PFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase
YP_006019012.1	KEGG: shw:Sputw3181_3725 adenylate cyclase; PFAM: Adenylate cyclase, class-I
YP_006019013.1	TIGRFAM: Frataxin-like; HAMAP: Protein cyaY; KEGG: shw:Sputw3181_3724 frataxin family protein; PFAM: Frataxin-like
YP_006019014.1	KEGG: shw:Sputw3181_3723 hypothetical protein
YP_006019015.1	TIGRFAM: Diaminopimelate decarboxylase; KEGG: shw:Sputw3181_3722 diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2
YP_006019016.1	TIGRFAM: Diaminopimelate epimerase; HAMAP: Diaminopimelate epimerase; KEGG: shw:Sputw3181_3721 diaminopimelate epimerase; PFAM: Diaminopimelate epimerase
YP_006019017.1	PFAM: Protein of unknown function DUF484; KEGG: spc:Sputcn32_3581 hypothetical protein
YP_006019018.1	TIGRFAM: Tyrosine recombinase XerC; HAMAP: Tyrosine recombinase xerC; KEGG: shn:Shewana3_0393 tyrosine recombinase XerC; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage
YP_006019019.1	KEGG: shw:Sputw3181_3718 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase-like hydrolase
YP_006019020.1	KEGG: shw:Sputw3181_3717 HupE/UreJ protein
YP_006019021.1	PFAM: ATPase associated with various cellular activities, AAA-4; KEGG: shw:Sputw3181_3716 putative transcriptional regulator
YP_006019022.1	KEGG: spc:Sputcn32_3576 hypothetical protein; TIGRFAM: Iron-sulfur cluster repair di-iron protein; PFAM: Haemerythrin/HHE cation-binding motif
YP_006019023.1	KEGG: shw:Sputw3181_0454 flagellar biosynthesis protein FlhA; TIGRFAM: Flagellar biosynthesis protein FlhA; PFAM: Type III secretion system FHIPEP
YP_006019024.1	KEGG: shw:Sputw3181_0455 flagellar biosynthetic protein FlhB; TIGRFAM: Flagellar biosynthetic protein FlhB; PFAM: Type III secretion exporter
YP_006019025.1	KEGG: spc:Sputcn32_3483 flagellar biosynthetic protein FliR; TIGRFAM: Flagellar biosynthesis protein FliR; PFAM: Type III secretion system inner membrane R protein
YP_006019026.1	PFAM: Bacterial export protein FliQ, family 3; KEGG: shw:Sputw3181_0457 flagellar biosynthetic protein FliQ
YP_006019027.1	KEGG: shw:Sputw3181_0458 flagellar biosynthesis protein FliP; TIGRFAM: Flagellar transport protein FliP; PFAM: Type III secretion system inner membrane P protein
YP_006019028.1	KEGG: shw:Sputw3181_0459 flagellar motor switch protein FliN; TIGRFAM: Flagellar motor switch FliN; PFAM: Surface presentation of antigen (SpoA)
YP_006019029.1	PFAM: Surface presentation of antigen (SpoA); KEGG: shw:Sputw3181_0460 hypothetical protein
YP_006019030.1	KEGG: shw:Sputw3181_0461 sigma-54 dependent trancsriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core
YP_006019031.1	KEGG: shw:Sputw3181_0462 flagellar hook-basal body complex subunit FliE; TIGRFAM: Flagellar hook-basal body complex protein FliE; PFAM: Flagellar hook-basal body complex protein FliE
YP_006019032.1	KEGG: shw:Sputw3181_0463 flagellar MS-ring protein; TIGRFAM: Flagellar FliF M-ring protein; PFAM: Flagellar M-ring C-terminal; Secretory protein YscJ/FliF
YP_006019033.1	PFAM: Flagellar motor switch protein FliG; KEGG: shw:Sputw3181_0464 flagellar motor switch protein G
YP_006019034.1	PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE; KEGG: shw:Sputw3181_0465 flagellar assembly protein H
YP_006019035.1	TIGRFAM: ATPase, type III secretion system, FliI/YscN; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; KEGG: shw:Sputw3181_0466 FliI/YscN family ATPase; SMART: ATPase, AAA+ type, core
YP_006019036.1	KEGG: shw:Sputw3181_0467 hypothetical protein
YP_006019037.1	PFAM: FlgN; KEGG: shw:Sputw3181_0468 hypothetical protein
YP_006019038.1	KEGG: shw:Sputw3181_0469 hypothetical protein; TIGRFAM: flagellar biosynthesis anti-sigma factor protein FlgM; PFAM: Anti-sigma-28 factor, FlgM
YP_006019039.1	KEGG: shw:Sputw3181_0470 SAF domain-containing protein; TIGRFAM: Flagella basal body P-ring formation protein FlgA; PFAM: SAF domain
YP_006019040.1	TIGRFAM: Flagellar basal-body rod protein FlgB; KEGG: shw:Sputw3181_0471 flagellar basal body rod protein FlgB
YP_006019041.1	KEGG: shw:Sputw3181_0472 flagellar basal-body rod protein FlgC; TIGRFAM: Flagellar basal-body rod protein FlgC; PFAM: Protein of unknown function DUF1078, C-terminal
YP_006019042.1	PFAM: Flagellar hook capping protein; KEGG: shw:Sputw3181_0473 flagellar hook capping protein
YP_006019043.1	KEGG: shw:Sputw3181_0474 flagellar hook protein FlgE; TIGRFAM: Fagellar hook-basal body protein, FlgE/F/G; PFAM: Flagellar basal body FlaE; Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal
YP_006019044.1	KEGG: shw:Sputw3181_0475 flagellar basal-body rod protein FlgF; TIGRFAM: Fagellar hook-basal body protein, FlgE/F/G; PFAM: Flagellar basal body rod protein, N-terminal
YP_006019045.1	KEGG: shw:Sputw3181_0476 flagellar basal-body rod protein FlgG; TIGRFAM: Flagellar basal-body rod FlgG; Fagellar hook-basal body protein, FlgE/F/G; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal
YP_006019046.1	PFAM: Flagellar L-ring protein; KEGG: shw:Sputw3181_0477 flagellar basal body L-ring protein
YP_006019047.1	PFAM: Flagellar P-ring protein; KEGG: shw:Sputw3181_0478 flagellar basal body P-ring protein
YP_006019048.1	PFAM: Flagellar protein FlgJ, N-terminal; KEGG: shw:Sputw3181_0479 peptidoglycan hydrolase
YP_006019049.1	KEGG: shw:Sputw3181_0480 flagellar hook-associated protein FlgK; TIGRFAM: Flagellar hook-associated protein, FlgK; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal
YP_006019050.1	KEGG: spc:Sputcn32_3458 flagellar hook-associated protein 3; TIGRFAM: Flagellar hook-associated protein 3; PFAM: Flagellin, N-terminal
YP_006019051.1	KEGG: shw:Sputw3181_0482 hypothetical protein
YP_006019052.1	PFAM: Flagellin, N-terminal; Flagellin, C-terminal; KEGG: shw:Sputw3181_0484 flagellin domain-containing protein
YP_006019053.1	PFAM: Flagellin, N-terminal; Flagellin, C-terminal; KEGG: shw:Sputw3181_0483 flagellin domain-containing protein
YP_006019054.1	PFAM: Flagellin, N-terminal; Flagellin, C-terminal; KEGG: shw:Sputw3181_0483 flagellin domain-containing protein
YP_006019055.1	PFAM: Flagellin, N-terminal; Flagellin, C-terminal; KEGG: shw:Sputw3181_0484 flagellin domain-containing protein
YP_006019056.1	PFAM: Flagellar hook-associated 2, C-terminal; Flagellar hook-associated protein 2, N-terminal; KEGG: shw:Sputw3181_0485 flagellar hook-associated 2 domain-containing protein
YP_006019057.1	KEGG: shw:Sputw3181_0486 flagellar protein FliS; TIGRFAM: Flagellar protein FliS; PFAM: Flagellar protein FliS
YP_006019058.1	KEGG: shw:Sputw3181_0487 hypothetical protein
YP_006019059.1	PFAM: Flagellar hook-length control protein; KEGG: spc:Sputcn32_3451 flagellar hook-length control protein
YP_006019060.1	PFAM: Flagellar basal body-associated protein FliL; KEGG: shw:Sputw3181_0489 flagellar basal body-associated protein FliL
YP_006019061.1	KEGG: shw:Sputw3181_0490 flagellar biosynthesis sigma factor; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 3
YP_006019062.1	KEGG: shw:Sputw3181_0491 MotA/TolQ/ExbB proton channel; TIGRFAM: flagellar motor stator protein MotA; PFAM: MotA/TolQ/ExbB proton channel
YP_006019063.1	PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: shw:Sputw3181_0492 OmpA/MotB domain-containing protein
YP_006019064.1	KEGG: shw:Sputw3181_0493 type IV pilus assembly PilZ
YP_006019065.1	KEGG: shw:Sputw3181_0494 hypothetical protein
YP_006019066.1	PFAM: DNA helicase, UvrD/REP type; DNA topoisomerase, type IA, zn finger; KEGG: sfr:Sfri_0452 UvrD/REP helicase
YP_006019067.1	KEGG: shw:Sputw3181_0495 DNA-binding protein fis; HAMAP: DNA-binding protein fis; PFAM: Helix-turn-helix, Fis-type
YP_006019068.1	KEGG: shn:Shewana3_0399 nifR3 family TIM-barrel protein; TIGRFAM: tRNA-dihydrouridine synthase, TIM-barrel, NifR3; PFAM: tRNA-dihydrouridine synthase
YP_006019069.1	KEGG: shw:Sputw3181_0497 ribosomal protein L11 methyltransferase; TIGRFAM: Ribosomal protein L11 methyltransferase; PFAM: Ribosomal L11 methyltransferase
YP_006019070.1	PFAM: Fumarate reductase respiratory complex; KEGG: shw:Sputw3181_0498 fumarate reductase cytochrome b-556 subunit
YP_006019071.1	PFAM: Fumarate reductase respiratory complex; KEGG: shn:Shewana3_0402 fumarate reductase respiratory complex, transmembrane subunit
YP_006019072.1	TIGRFAM: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; KEGG: shw:Sputw3181_0500 fumarate reductase flavoprotein subunit; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal
YP_006019073.1	KEGG: spc:Sputcn32_3438 fumarate reductase iron-sulfur subunit; TIGRFAM: Succinate dehydrogenase/fumarate reductase iron-sulphur protein
YP_006019074.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: shw:Sputw3181_0502 antibiotic biosynthesis monooxygenase
YP_006019075.1	KEGG: spc:Sputcn32_3436 alcohol dehydrogenase; TIGRFAM: Alcohol dehydrogenase, zinc-binding type 1; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like
YP_006019076.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spc:Sputcn32_3435 LysR family transcriptional regulator
YP_006019077.1	TIGRFAM: Transcription termination factor Rho; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; Rho termination factor, RNA-binding; Rho termination factor, N-terminal; KEGG: shw:Sputw3181_0505 transcription termination factor Rho; SMART: Cold shock protein; ATPase, AAA+ type, core
YP_006019078.1	KEGG: shn:Shewana3_0409 thioredoxin; TIGRFAM: Thioredoxin; PFAM: Thioredoxin domain
YP_006019079.1	HAMAP: ATP-dependent RNA helicase rhlB; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; KEGG: shw:Sputw3181_0507 ATP-dependent RNA helicase RhlB; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal
YP_006019080.1	KEGG: shw:Sputw3181_0508 Ppx/GppA phosphatase; PFAM: Ppx/GppA phosphatase
YP_006019081.1	KEGG: shn:Shewana3_0412 hypothetical protein
YP_006019082.1	KEGG: shw:Sputw3181_0510 mutator MutT protein; TIGRFAM: Mutator MutT protein; PFAM: NUDIX hydrolase domain
YP_006019083.1	KEGG: spc:Sputcn32_3428 hypothetical protein; HAMAP: Uncharacterised protein family, zinc-binding; PFAM: Uncharacterised protein family, zinc-binding
YP_006019084.1	KEGG: shn:Shewana3_0415 hypothetical protein; HAMAP: UPF0289 protein yacF; PFAM: Protein of unknown function DUF1342
YP_006019085.1	TIGRFAM: Dephospho-CoA kinase; HAMAP: Dephospho-CoA kinase; KEGG: shw:Sputw3181_0513 dephospho-CoA kinase
YP_006019086.1	KEGG: she:Shewmr4_0418 Type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A; PFAM: Peptidase A24A, N-terminal; Peptidase A24A, prepilin type IV
YP_006019087.1	PFAM: Type II secretion system F domain; KEGG: shn:Shewana3_0418 type II secretion system protein
YP_006019088.1	KEGG: spc:Sputcn32_3423 type IV-A pilus assembly ATPase PilB; TIGRFAM: ATPase, type IV, pilus assembly, PilB; PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal
YP_006019089.1	KEGG: she:Shewmr4_0422 methylation site containing protein
YP_006019090.1	TIGRFAM: Nicotinate-nucleotide pyrophosphorylase; KEGG: shn:Shewana3_0422 nicotinate-nucleotide pyrophosphorylase [carboxylating]; PFAM: Quinolinate phosphoribosyl transferase
YP_006019091.1	KEGG: son:SO_0421 N-acetyl-anhydromuranmyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; SMART: N-acetylmuramoyl-L-alanine amidase, family 2
YP_006019092.1	KEGG: shw:Sputw3181_0524 regulatory protein AmpE
YP_006019093.1	KEGG: shn:Shewana3_0425 transcriptional regulator PdhR; PFAM: HTH transcriptional regulator, GntR; GntR, C-terminal; SMART: HTH transcriptional regulator, GntR
YP_006019094.1	TIGRFAM: 2-oxo-acid dehydrogenase E1 component homodimeric type; KEGG: shw:Sputw3181_0526 pyruvate dehydrogenase subunit E1; PFAM: Transketolase, N-terminal
YP_006019095.1	TIGRFAM: Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex; KEGG: shw:Sputw3181_0527 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; E3 binding; Biotin/lipoyl attachment
YP_006019096.1	TIGRFAM: Dihydrolipoamide dehydrogenase; KEGG: shn:Shewana3_0428 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; Pyridine nucleotide-disulphide oxidoreductase, dimerisation
YP_006019097.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold; PAS fold-3; Two component regulator propeller; KEGG: shw:Sputw3181_0529 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS; PAC motif
YP_006019098.1	PFAM: Patatin; Surface antigen variable number; KEGG: shw:Sputw3181_0530 patatin
YP_006019099.1	PFAM: Transposase, IS4-like; KEGG: asa:ASA_P4G164 transposase
YP_006019100.1	KEGG: shm:Shewmr7_3734 transposase
YP_006019101.1	PFAM: Integrase, catalytic core; KEGG: shm:Shewmr7_3980 integrase catalytic subunit
YP_006019102.1	KEGG: son:SO_0430 hypothetical protein
YP_006019103.1	KEGG: shn:Shewana3_0432 2-deoxyglucose-6-phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase-like hydrolase
YP_006019104.1	manually curated; TIGRFAM: Aconitase B, bacterial; KEGG: shm:Shewmr7_3592 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; PFAM: Aconitase B, N-terminal, bacterial; Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha
YP_006019105.1	KEGG: shw:Sputw3181_3673 delta-aminolevulinic acid dehydratase; PFAM: Tetrapyrrole biosynthesis, porphobilinogen synthase
YP_006019106.1	SMART: Diguanylate cyclase, predicted; TIGRFAM: Diguanylate cyclase, predicted; KEGG: spc:Sputcn32_0498 diguanylate cyclase; PFAM: Diguanylate cyclase, predicted; Diverse 7TM receptor, transmembrane region; Diverse 7TM receptor, extracellular region 2
YP_006019107.1	PFAM: Deoxyribonuclease, TatD-related; KEGG: shw:Sputw3181_3671 TatD-related deoxyribonuclease
YP_006019108.1	KEGG: shw:Sputw3181_3670 hypothetical protein
YP_006019109.1	KEGG: shw:Sputw3181_3669 sec-independent protein translocase, TatC subunit; TIGRFAM: Twin arginine-targeting protein translocase, TatC; PFAM: Sec-independent periplasmic protein translocase
YP_006019110.1	TIGRFAM: Twin-arginine translocation protein TatB; HAMAP: Twin-arginine translocation protein TatB; KEGG: shw:Sputw3181_3668 twin-arginine translocation protein, TatB subunit; PFAM: Bacterial sec-independent translocation protein mttA/Hcf106
YP_006019111.1	TIGRFAM: Twin-arginine translocation protein TatA/E; HAMAP: Twin-arginine translocation protein TatA/E; KEGG: shw:Sputw3181_3667 twin arginine-targeting protein translocase; PFAM: Bacterial sec-independent translocation protein mttA/Hcf106
YP_006019112.1	TIGRFAM: 2-polyprenylphenol 6-hydroxylase; HAMAP: ubiquinone biosynthesis protein ubiB; KEGG: shm:Shewmr7_0403 2-octaprenylphenol hydroxylase; PFAM: ABC-1
YP_006019113.1	PFAM: Sterol-binding; KEGG: shw:Sputw3181_3665 hypothetical protein
YP_006019114.1	TIGRFAM: UbiE/COQ5 methyltransferase; HAMAP: UbiE/COQ5 methyltransferase; KEGG: shw:Sputw3181_3664 ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase
YP_006019115.1	PFAM: Ureohydrolase; KEGG: spc:Sputcn32_0507 arginase/agmatinase/formiminoglutamase
YP_006019116.1	TIGRFAM: Ribonuclease E inhibitor RraA, gammaproteobacteria; Ribonuclease E inhibitor RraA; HAMAP: Ribonuclease E inhibitor RraA; KEGG: shw:Sputw3181_3662 ribonuclease activity regulator protein RraA; PFAM: Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase
YP_006019117.1	KEGG: shw:Sputw3181_3661 hypothetical protein
YP_006019118.1	KEGG: shw:Sputw3181_3660 phosphoesterase, PA-phosphatase related; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase
YP_006019119.1	TIGRFAM: Conserved hypothetical protein CHP00661; KEGG: spc:Sputcn32_0511 hypothetical protein
YP_006019120.1	KEGG: shw:Sputw3181_3658 hypothetical protein
YP_006019121.1	TIGRFAM: TonB, C-terminal; KEGG: swp:swp_3317 TonB
YP_006019122.1	PFAM: SNARE associated Golgi protein; KEGG: spc:Sputcn32_0514 DedA family protein
YP_006019123.1	KEGG: shm:Shewmr7_0413 putative manganese-dependent inorganic pyrophosphatase; PFAM: DHHA2; Phosphoesterase, RecJ-like
YP_006019124.1	KEGG: shn:Shewana3_3716 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00022; PFAM: Conserved hypothetical protein CHP00022
YP_006019125.1	PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: shm:Shewmr7_0415 TonB-dependent receptor
YP_006019126.1	KEGG: shn:Shewana3_3714 hypothetical protein
YP_006019127.1	PFAM: Peptidase S16, lon N-terminal; KEGG: shm:Shewmr7_0417 ATP-dependent protease La
YP_006019128.1	PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: shw:Sputw3181_3651 pseudouridine synthase
YP_006019129.1	KEGG: shn:Shewana3_3711 hypothetical protein
YP_006019130.1	KEGG: shn:Shewana3_3710 hypothetical protein
YP_006019131.1	PFAM: dTDP-4-dehydrorhamnose reductase; KEGG: son:SO_4174 NAD dependent epimerase/dehydratase family protein
YP_006019132.1	KEGG: she:Shewmr4_3530 periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like
YP_006019133.1	KEGG: son:SO_4172 DNA-binding response regulator; PFAM: Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region
YP_006019134.1	PFAM: Peptidase M4, thermolysin C-terminal; Peptidase M4, thermolysin; PKD; Peptidase M4, propeptide, PepSY; Peptidase, C-terminal, archaeal/bacterial; KEGG: sdn:Sden_3015 peptidase M4, thermolysin; SMART: PKD
YP_006019135.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: spc:Sputcn32_0523 C factor cell-cell signaling protein
YP_006019136.1	PFAM: Deoxyribodipyrimidine photolyase-related protein; KEGG: shw:Sputw3181_3646 deoxyribodipyrimidine photolyase-related protein
YP_006019137.1	KEGG: mmw:Mmwyl1_2680 hypothetical protein
YP_006019138.1	PFAM: Protein of unknown function DUF971; KEGG: shn:Shewana3_3701 hypothetical protein
YP_006019139.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Heat shock protein HslU; KEGG: spc:Sputcn32_0528 ATP-dependent protease ATP-binding subunit HslU; HAMAP: ATP-dependent hsl protease ATP-binding subunit hslU; PFAM: ATPase associated with various cellular activities, AAA-2
YP_006019140.1	TIGRFAM: ATP-dependent protease HslVU, peptidase subunit; HAMAP: ATP-dependent protease hslV; KEGG: shw:Sputw3181_3642 ATP-dependent protease peptidase subunit; PFAM: Proteasome, subunit alpha/beta
YP_006019141.1	PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; KEGG: spc:Sputcn32_0531 deaminase-reductase domain-containing protein
YP_006019142.1	KEGG: shw:Sputw3181_3639 hypothetical protein
YP_006019143.1	KEGG: spc:Sputcn32_0533 flagellar biosynthesis protein, putative
YP_006019144.1	KEGG: spc:Sputcn32_0534 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal
YP_006019145.1	KEGG: spc:Sputcn32_0535 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_006019146.1	PFAM: Sulphate transporter; KEGG: shm:Shewmr7_0438 sulphate transporter
YP_006019147.1	PFAM: Extracellular solute-binding protein, family 3; KEGG: shw:Sputw3181_3635 hypothetical protein
YP_006019148.1	KEGG: shw:Sputw3181_3634 hypothetical protein; PFAM: Sel1-like; SMART: Sel1-like
YP_006019149.1	PFAM: Mechanosensitive ion channel MscS; KEGG: shw:Sputw3181_3633 MscS mechanosensitive ion channel
YP_006019150.1	KEGG: shw:Sputw3181_3632 hypothetical protein
YP_006019151.1	KEGG: shw:Sputw3181_3631 diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2
YP_006019152.1	PFAM: Protein of unknown function DUF465; KEGG: shn:Shewana3_3681 hypothetical protein
YP_006019153.1	KEGG: son:SO_4133 uridine phosphorylase; TIGRFAM: Uridine phosphorylase; PFAM: Nucleoside phosphorylase
YP_006019154.1	PFAM: Nucleoside-specific channel-forming protein, Tsx-like; KEGG: shw:Sputw3181_3628 hypothetical protein
YP_006019155.1	PFAM: Nodulation efficiency, NfeD; KEGG: shn:Shewana3_3678 hypothetical protein
YP_006019156.1	KEGG: shw:Sputw3181_3626 band 7 protein; PFAM: Band 7 protein; SMART: Band 7 protein
YP_006019157.1	KEGG: son:SO_4128 SPFH domain-containing protein/band 7 family protein; PFAM: Band 7 protein; SMART: Band 7 protein
YP_006019158.1	KEGG: shw:Sputw3181_3624 hypothetical protein
YP_006019159.1	PFAM: Sporulation/cell division region, bacteria; KEGG: shw:Sputw3181_3623 sporulation domain-containing protein
YP_006019160.1	TIGRFAM: Arginyl-tRNA synthetase, class Ic; HAMAP: Arginyl-tRNA synthetase, class Ic; KEGG: shw:Sputw3181_3622 arginyl-tRNA synthetase
YP_006019161.1	TIGRFAM: Primosomal protein n; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; KEGG: shw:Sputw3181_3621 primosomal protein N'; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal
YP_006019162.1	TIGRFAM: Motility protein FimV, N-terminal; KEGG: she:Shewmr4_3494 hypothetical protein
YP_006019163.1	TIGRFAM: Ribosomal protein L31; HAMAP: 50S ribosomal protein L31; KEGG: shw:Sputw3181_3619 50S ribosomal protein L31; PFAM: Ribosomal protein L31
YP_006019164.1	PFAM: Malic enzyme, NAD-binding; Malic enzyme, N-terminal; KEGG: shw:Sputw3181_3618 malate dehydrogenase
YP_006019165.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; KEGG: shn:Shewana3_3668 regulatory protein CsrD; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted
YP_006019166.1	KEGG: son:SO_4114.2 biogenesis protein MshI
YP_006019167.1	KEGG: she:Shewmr4_3489 hypothetical protein
YP_006019168.1	KEGG: spc:Sputcn32_0558 MSHA biogenesis protein MshJ
YP_006019169.1	KEGG: shw:Sputw3181_3613 MSHA biogenesis protein MshK
YP_006019170.1	KEGG: shw:Sputw3181_3612 pilus (MSHA type) biogenesis protein MshL; TIGRFAM: Pilus biogenesis, MshL; PFAM: Type II/III secretion system; Secretin, N-terminal; Secretin/TonB, short N-terminal
YP_006019171.1	KEGG: son:SO_4111 MSHA biogenesis protein MshM
YP_006019172.1	KEGG: son:SO_4110 MSHA biogenesis protein MshN, putative; PFAM: Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat
YP_006019173.1	PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal; KEGG: shw:Sputw3181_3609 type II secretion system protein E
YP_006019174.1	PFAM: Type II secretion system F domain; KEGG: shw:Sputw3181_3608 type II secretion system protein
YP_006019175.1	KEGG: spc:Sputcn32_0565 hypothetical protein
YP_006019176.1	KEGG: son:SO_4106 MSHA pilin protein MshB
YP_006019177.1	KEGG: slo:Shew_0396 methylation site containing protein
YP_006019178.1	KEGG: shw:Sputw3181_3604 methylation site containing protein
YP_006019179.1	KEGG: son:SO_4104 MSHA pilin protein MshC
YP_006019180.1	KEGG: shm:Shewmr7_0475 methylation site containing protein
YP_006019181.1	KEGG: she:Shewmr4_3475 methylation site containing protein
YP_006019182.1	KEGG: spc:Sputcn32_0572 MSHA biogenesis protein MshP
YP_006019183.1	KEGG: sfr:Sfri_3739 hypothetical protein
YP_006019184.1	KEGG: shn:Shewana3_3648 rod shape-determining protein MreB; TIGRFAM: Cell shape determining protein MreB/Mrl; PFAM: Cell shape determining protein MreB/Mrl
YP_006019185.1	KEGG: shm:Shewmr7_0480 rod shape-determining protein MreC; TIGRFAM: Rod shape-determining protein MreC, subtype; PFAM: Rod shape-determining protein MreC
YP_006019186.1	KEGG: shw:Sputw3181_3596 rod shape-determining protein MreD; TIGRFAM: Cell shape-determining protein MreD; PFAM: Cell shape-determining protein MreD
YP_006019187.1	TIGRFAM: Maf-like protein; HAMAP: Maf-like protein; KEGG: she:Shewmr4_3469 maf protein; PFAM: Maf-like protein
YP_006019188.1	KEGG: shw:Sputw3181_3594 ribonuclease G; TIGRFAM: Ribonuclease E/G; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; Ribosomal protein S1, RNA binding domain
YP_006019189.1	TIGRFAM: Conserved hypothetical protein CHP02099; KEGG: shw:Sputw3181_3593 hypothetical protein
YP_006019190.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: spc:Sputcn32_0580 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_006019191.1	PFAM: Peptidase U62, modulator of DNA gyrase; KEGG: shw:Sputw3181_3591 peptidase U62, modulator of DNA gyrase
YP_006019192.1	PFAM: Outer membrane efflux protein; KEGG: shm:Shewmr7_0487 outer membrane efflux protein
YP_006019193.1	PFAM: Secretion protein HlyD; KEGG: shw:Sputw3181_3589 secretion protein HlyD family protein
YP_006019194.1	PFAM: ABC-2 type transporter; KEGG: shw:Sputw3181_3588 ABC-2 type transporter
YP_006019195.1	PFAM: ABC-2 type transporter; KEGG: spc:Sputcn32_0585 ABC-2 type transporter
YP_006019196.1	KEGG: shn:Shewana3_3636 hypothetical protein
YP_006019198.1	PFAM: Amino acid permease-associated region; KEGG: spc:Sputcn32_0587 amino acid permease-associated region
YP_006019199.1	KEGG: shw:Sputw3181_3580 Ig domain-containing protein; PFAM: Bacterial Ig-like, group 1; SMART: Bacterial Ig-like, group 1
YP_006019200.1	PFAM: Uncharacterised protein family UPF0307; KEGG: shw:Sputw3181_3579 hypothetical protein
YP_006019201.1	PFAM: Peptidase U62, modulator of DNA gyrase; KEGG: shw:Sputw3181_3578 peptidase U62, modulator of DNA gyrase
YP_006019202.1	PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: shw:Sputw3181_3577 TonB-dependent receptor
YP_006019203.1	KEGG: shm:Shewmr7_0497 hypothetical protein
YP_006019204.1	PFAM: Protein of unknown function DUF331; KEGG: shw:Sputw3181_3575 hypothetical protein
YP_006019205.1	PFAM: Fumarate lyase; Fumarase C, C-terminal; TIGRFAM: Fumarate hydratase, class II; HAMAP: Fumarate hydratase class II; KEGG: spc:Sputcn32_0598 fumarate hydratase, class II
YP_006019206.1	SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: Ribosomal protein S12 methylthiotransferase RimO; Methylthiotransferase; KEGG: shw:Sputw3181_3573 ribosomal protein S12 methylthiotransferase; HAMAP: Ribosomal protein S12 methylthiotransferase RimO; PFAM: Methylthiotransferase, N-terminal; Radical SAM
YP_006019207.1	PFAM: Protein of unknown function DUF541; KEGG: shw:Sputw3181_3572 hypothetical protein
YP_006019208.1	KEGG: spc:Sputcn32_0601 diguanylate phosphodiesterase; PFAM: Diguanylate phosphodiesterase, predicted; SMART: Diguanylate phosphodiesterase, predicted
YP_006019209.1	KEGG: sdn:Sden_1944 hypothetical protein
YP_006019210.1	PFAM: Methyltransferase type 11; KEGG: shw:Sputw3181_3570 methyltransferase type 11
YP_006019211.1	KEGG: ppr:PBPRA1430 putative nicotinamide mononucleotide transporter; TIGRFAM: Nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC
YP_006019212.1	KEGG: N-ribosylnicotinamide phosphorylase; PFAM: Nucleoside phosphorylase
YP_006019213.1	KEGG: vex:VEA_000333 predicted N-ribosylNicotinamide CRP-like regulator; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding
YP_006019214.1	KEGG: saz:Sama_1558 hypothetical protein
YP_006019215.1	KEGG: shw:Sputw3181_3568 OmpA domain-containing protein
YP_006019216.1	PFAM: RNA-directed DNA polymerase (reverse transcriptase); KEGG: kpu:KP1_0613 hypothetical protein
YP_006019217.1	PFAM: SAICAR synthetase; TIGRFAM: Phosphoribosylaminoimidazole-succinocarboxamide synthase; HAMAP: Phosphoribosylaminoimidazole-succinocarboxamide synthase; KEGG: spc:Sputcn32_0608 phosphoribosylaminoimidazole-succinocarboxamide synthase
YP_006019218.1	manually curated; KEGG: spc:Sputcn32_0609 hypothetical protein
YP_006019219.1	PFAM: Activator of Hsp90 ATPase homologue 1-like; KEGG: smd:Smed_0005 activator of HSP90 ATPase 1 family protein
YP_006019220.1	PFAM: Pentapeptide repeat; KEGG: shw:Sputw3181_3561 pentapeptide repeat-containing protein
YP_006019221.1	KEGG: son:SO_4062 polysulfide reductase, subunit A; PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 region; Twin-arginine translocation pathway, signal sequence, subgroup; Molydopterin dinucleotide-binding region
YP_006019222.1	PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: shw:Sputw3181_3558 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_006019223.1	PFAM: Polysulphide reductase, NrfD; KEGG: shw:Sputw3181_3557 polysulphide reductase, NrfD
YP_006019224.1	PFAM: Protein of unknown function DUF81; KEGG: shw:Sputw3181_3556 hypothetical protein
YP_006019225.1	PFAM: Methionine repressor MetJ; KEGG: shw:Sputw3181_3555 transcriptional repressor protein MetJ
YP_006019226.1	KEGG: spc:Sputcn32_0616 O-succinylhomoserine (thiol)-lyase; TIGRFAM: O-succinylhomoserine (thiol)-lyase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme
YP_006019227.1	KEGG: shw:Sputw3181_3553 bifunctional aspartate kinase II/homoserine dehydrogenase II; TIGRFAM: Aspartate kinase region; PFAM: Homoserine dehydrogenase, catalytic; Aspartate/glutamate/uridylate kinase; Aspartate/homoserine dehydrogenase, NAD-binding
YP_006019228.1	TIGRFAM: 5,10-methylenetetrahydrofolate reductase; KEGG: shw:Sputw3181_3552 5,10-methylenetetrahydrofolate reductase; PFAM: Methylenetetrahydrofolate reductase
YP_006019229.1	KEGG: shw:Sputw3181_3550 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR
YP_006019230.1	PFAM: Secretion protein HlyD; KEGG: shw:Sputw3181_3549 secretion protein HlyD family protein
YP_006019231.1	KEGG: spc:Sputcn32_0622 hypothetical protein
YP_006019232.1	PFAM: Cytochrome c, class I; KEGG: shw:Sputw3181_3547 cytochrome c family protein
YP_006019233.1	PFAM: Cytochrome c, class I; KEGG: shw:Sputw3181_3546 cytochrome c, class I
YP_006019234.1	KEGG: cch:Cag_0532 hypothetical protein
YP_006019236.1	KEGG: spc:Sputcn32_0631 hypothetical protein
YP_006019237.1	TIGRFAM: TonB, C-terminal; KEGG: shw:Sputw3181_3542 TonB family protein
YP_006019238.1	KEGG: spc:Sputcn32_0633 hydratase/decarboxylase family protein
YP_006019240.1	PFAM: Protein of unknown function DUF6, transmembrane; KEGG: shw:Sputw3181_3540 hypothetical protein
YP_006019241.1	KEGG: shw:Sputw3181_3539 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase
YP_006019242.1	KEGG: shw:Sputw3181_3538 hypothetical protein
YP_006019243.1	KEGG: svo:SVI_0453 pilin
YP_006019244.1	KEGG: shw:Sputw3181_3537 DEAD/DEAH box helicase domain-containing protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DbpA, RNA-binding; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal
YP_006019245.1	PFAM: Peptidase M28; KEGG: shn:Shewana3_3594 peptidase M28
YP_006019246.1	KEGG: shw:Sputw3181_3536 excinuclease ABC, A subunit; TIGRFAM: Excinuclease ABC, A subunit; PFAM: ABC transporter-like
YP_006019247.1	PFAM: Major facilitator superfamily MFS-1; KEGG: shn:Shewana3_3591 major facilitator transporter
YP_006019248.1	KEGG: shw:Sputw3181_3534 single-strand binding protein; TIGRFAM: Single-strand DNA-binding; PFAM: Primosome PriB/single-strand DNA-binding
YP_006019249.1	PFAM: Integrase, catalytic core, phage; KEGG: gca:Galf_2422 integrase family protein
YP_006019250.1	PFAM: Integrase, catalytic core, phage; KEGG: xac:XAC2903 hypothetical protein
YP_006019251.1	KEGG: gca:Galf_2407 hypothetical protein
YP_006019252.1	KEGG: gca:Galf_2419 hypothetical protein
YP_006019253.1	KEGG: shn:Shewana3_2918 hypothetical protein
YP_006019254.1	SMART: ATPase, AAA+ type, core; KEGG: shn:Shewana3_2919 DNA helicase/exodeoxyribonuclease V, alpha subunit
YP_006019255.1	KEGG: asa:ASA_2567 hypothetical protein
YP_006019256.1	PFAM: Transposase, IS4-like; KEGG: asa:ASA_P4G164 transposase
YP_006019257.1	PFAM: Protein of unknown function DUF823; KEGG: svo:SVI_2842 hypothetical protein
YP_006019258.1	TIGRFAM: Nucleotide sugar dehydrogenase; KEGG: spl:Spea_1418 UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation
YP_006019261.1	PFAM: Protein of unknown function DUF1835
YP_006019262.1	PFAM: Transposase, IS4-like; KEGG: asa:ASA_P4G164 transposase
YP_006019264.1	KEGG: xne:XNC1_1132 conserved hypothetical protein; putative exported protein
YP_006019265.1	KEGG: eok:G2583_pO550050 ToxR-regulated lipoprotein
YP_006019266.1	PFAM: Insecticidal toxin complex/plasmid viulence protein; KEGG: plu:plu0971 insecticidal toxin complex protein TcdA5
YP_006019267.1	PFAM: Salmonella virulence plasmid 65kDa B protein; FG-GAP; KEGG: brh:RBRH_00598 insecticidal toxin complex protein TcaC
YP_006019268.1	KEGG: ypi:YpsIP31758_1823 putative toxin protein
YP_006019269.1	TIGRFAM: RHS repeat-associated core domain; YD repeat; KEGG: ypi:YpsIP31758_1823 putative toxin protein
YP_006019270.1	PFAM: Resolvase, N-terminal; Resolvase, helix-turn-helix region; KEGG: sed:SeD_B0011 RlgA
YP_006019271.1	KEGG: sed:SeD_B0014 type II secretion system protein
YP_006019273.1	KEGG: ppr:PBPRA2822 hypothetical protein
YP_006019274.1	KEGG: vha:VIBHAR_01641 hypothetical protein; PFAM: Bacterial Ig-like, group 1; Protein of unknown function DUF823; SMART: Bacterial Ig-like, group 1
YP_006019275.1	KEGG: vha:VIBHAR_01641 hypothetical protein
YP_006019278.1	KEGG: spl:Spea_2708 hypothetical protein
YP_006019279.1	KEGG: svo:SVI_3012 hypothetical protein
YP_006019280.1	KEGG: svo:SVI_3011 hypothetical protein
YP_006019282.1	PFAM: Transposase, IS4-like; KEGG: asa:ASA_P4G164 transposase
YP_006019283.1	KEGG: vha:VIBHAR_05976 hypothetical protein; PFAM: Bacterial Ig-like, group 1; Protein of unknown function DUF823; SMART: Bacterial Ig-like, group 1
YP_006019285.1	KEGG: swd:Swoo_1909 OmpA domain-containing protein
YP_006019286.1	KEGG: son:SO_A0033 hypothetical protein
YP_006019288.1	PFAM: Transposase IS3/IS911; KEGG: son:SO_4581 ISSod1, transposase OrfA
YP_006019289.1	KEGG: mmw:Mmwyl1_2458 SMC domain-containing protein
YP_006019290.1	PFAM: Porin, Gram-negative type; KEGG: sfr:Sfri_0677 porin
YP_006019291.1	KEGG: sfr:Sfri_0678 fumarate reductase iron-sulfur subunit; TIGRFAM: Succinate dehydrogenase/fumarate reductase iron-sulphur protein
YP_006019292.1	TIGRFAM: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; KEGG: sfr:Sfri_0679 fumarate reductase flavoprotein subunit; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal
YP_006019293.1	PFAM: Fumarate reductase respiratory complex; KEGG: sfr:Sfri_0680 fumarate reductase cytochrome b-556 subunit
YP_006019294.1	KEGG: sfr:Sfri_0681 anaerobic C4-dicarboxylate antiporter, Dcu family protein; TIGRFAM: Anaerobic c4-dicarboxylate membrane transporter; PFAM: Anaerobic c4-dicarboxylate membrane transporter
YP_006019295.1	TIGRFAM: Aspartate ammonia-lyase; KEGG: sfr:Sfri_0682 aspartate ammonia-lyase; PFAM: Fumarate lyase; Fumarase C, C-terminal
YP_006019296.1	TIGRFAM: L-asparaginase, type II; KEGG: asa:ASA_0472 L-asparaginase II; PFAM: Asparaginase/glutaminase
YP_006019297.1	SMART: Extracellular solute-binding protein, family 3; TIGRFAM: Chorismate mutase, periplasmic; KEGG: pap:PSPA7_1651 cyclohexadienyl dehydratase precursor; PFAM: Extracellular solute-binding protein, family 3; Chorismate mutase, type II
YP_006019298.1	PFAM: Peptidase M16, N-terminal; Peptidase M16, C-terminal; KEGG: shw:Sputw3181_0679 peptidase M16 domain-containing protein
YP_006019299.1	KEGG: son:SO_4019 hypothetical protein
YP_006019300.1	KEGG: shw:Sputw3181_0683 hypothetical protein
YP_006019301.1	PFAM: Fatty acid hydroxylase; KEGG: psm:PSM_A1397 transmembrane protein
YP_006019302.1	KEGG: son:SO_4017 Slt family transglycosylase; PFAM: MLTD-N; Lytic transglycosylase-like, catalytic; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup
YP_006019303.1	KEGG: son:SO_4016 hypothetical protein; PFAM: Serine/threonine-protein kinase-like domain; Leucine-rich repeat; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain; Leucine-rich repeat, typical subtype
YP_006019304.1	KEGG: son:SO_4015 hypothetical protein; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_006019305.1	PFAM: Acriflavin resistance protein; KEGG: son:SO_4014 AcrB/AcrD/AcrF family protein
YP_006019306.1	KEGG: she:Shewmr4_3412 Sel1 domain-containing protein; PFAM: Sel1-like; SMART: Sel1-like
YP_006019307.1	KEGG: son:SO_0639 collagenase family protein; PFAM: Peptidase M9A/M9B, collagenase C-terminal; Peptidase M9A/M9B, N-terminal; Peptidase, C-terminal, archaeal/bacterial
YP_006019308.1	TIGRFAM: Quinone oxidoreductase putative, PIG3; KEGG: shw:Sputw3181_0689 alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like
YP_006019309.1	KEGG: shw:Sputw3181_0690 hypothetical protein
YP_006019310.1	KEGG: shw:Sputw3181_0691 aldose 1-epimerase; PFAM: Aldose 1-epimerase
YP_006019311.1	TIGRFAM: Galactokinase; KEGG: spc:Sputcn32_3249 galactokinase; PFAM: Galactokinase galactose-binding domain; GHMP kinase; GHMP kinase, C-terminal
YP_006019312.1	PFAM: Cation/H+ exchanger; Regulator of K+ conductance, N-terminal; KEGG: son:SO_0695 glutathione-regulated potassium-efflux system protein KefC, putative
YP_006019313.1	HAMAP: Thiol:disulfide interchange protein dsbD; KEGG: shm:Shewmr7_0546 thiol:disulfide interchange protein precursor; PFAM: Cytochrome c assembly protein, transmembrane region; Thioredoxin domain
YP_006019314.1	PFAM: Divalent ion tolerance protein, CutA1; KEGG: shw:Sputw3181_0695 CutA1 divalent ion tolerance protein
YP_006019315.1	PFAM: FxsA cytoplasmic membrane protein; KEGG: shm:Shewmr7_0548 FxsA cytoplasmic membrane protein
YP_006019316.1	KEGG: saz:Sama_3127 hypothetical protein
YP_006019317.1	PFAM: Acriflavin resistance protein; KEGG: shw:Sputw3181_3474 acriflavin resistance protein
YP_006019318.1	KEGG: spc:Sputcn32_0697 RND family efflux transporter MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_006019319.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spc:Sputcn32_0698 LysR family transcriptional regulator
YP_006019320.1	KEGG: shn:Shewana3_3569 MATE efflux family protein; TIGRFAM: Multi antimicrobial extrusion protein MatE; PFAM: Multi antimicrobial extrusion protein MatE
YP_006019321.1	KEGG: shw:Sputw3181_3470 co-chaperonin GroES; HAMAP: Chaperonin Cpn10, subgroup; PFAM: Chaperonin Cpn10
YP_006019322.1	TIGRFAM: Chaperonin Cpn60; HAMAP: 60 kDa chaperonin; KEGG: spc:Sputcn32_0701 chaperonin GroEL; PFAM: Chaperonin Cpn60/TCP-1
YP_006019323.1	PFAM: Helix-turn-helix type 3; KEGG: son:SO_0705 Cro/CI family transcriptional regulator
YP_006019324.1	KEGG: she:Shewmr4_3395 HipA domain-containing protein; TIGRFAM: HipA, N-terminal; PFAM: HipA-like, N-terminal; HipA-like, C-terminal
YP_006019325.1	KEGG: ent:Ent638_0069 hypothetical protein
YP_006019326.1	KEGG: shn:Shewana3_3552 4-carboxymuconolactone decarboxylase
YP_006019327.1	KEGG: son:SO_0721 hypothetical protein
YP_006019328.1	KEGG: shn:Shewana3_3547 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core
YP_006019329.1	KEGG: xcv:XCV3148 putative aminopeptidase precursor
YP_006019330.1	KEGG: shw:Sputw3181_3483 hypothetical protein; HAMAP: UPF0251 protein; PFAM: Uncharacterised protein family UPF0251
YP_006019331.1	KEGG: spc:Sputcn32_0688 hypothetical protein
YP_006019332.1	KEGG: spc:Sputcn32_0689 thioredoxin domain-containing protein
YP_006019333.1	KEGG: she:Shewmr4_3373 cold-shock DNA-binding protein family protein; PFAM: Excalibur calcium-binding domain; Cold-shock protein, DNA-binding; SMART: Cold shock protein
YP_006019334.1	KEGG: sdn:Sden_2458 hypothetical protein
YP_006019335.1	PFAM: Transcriptional regulator PadR N-terminal-like; KEGG: spc:Sputcn32_0690 PadR-like family transcriptional regulator
YP_006019336.1	KEGG: son:SO_0735 hypothetical protein
YP_006019337.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate cyclase, predicted; PAS fold; KEGG: shn:Shewana3_3543 diguanylate cyclase with PAS/PAC sensor; SMART: Diguanylate cyclase, predicted; PAS
YP_006019338.1	KEGG: shn:Shewana3_3540 peptidoglycan glycosyltransferase; PFAM: Alkaline phosphatase; SMART: Alkaline phosphatase
YP_006019339.1	KEGG: shn:Shewana3_3539 alkaline phosphatase; PFAM: Alkaline phosphatase; SMART: Alkaline phosphatase
YP_006019340.1	KEGG: shn:Shewana3_3538 hypothetical protein
YP_006019341.1	KEGG: shw:Sputw3181_3477 AraC family transcriptional regulator; PFAM: AraC protein, arabinose-binding/dimerisation; Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_006019342.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: spc:Sputcn32_0694 lysine exporter protein LysE/YggA
YP_006019343.1	KEGG: shw:Sputw3181_3475 hypothetical protein
YP_006019344.1	KEGG: swd:Swoo_4630 TIR protein; PFAM: Toll-Interleukin receptor; SMART: Toll-Interleukin receptor
YP_006019346.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; GAF; KEGG: shn:Shewana3_0659 diguanylate cyclase/phosphodiesterase with GAF sensor; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; GAF
YP_006019347.1	KEGG: shm:Shewmr7_3361 hypothetical protein
YP_006019348.1	KEGG: shn:Shewana3_0661 hypothetical protein
YP_006019349.1	KEGG: shn:Shewana3_0662 hypothetical protein
YP_006019350.1	KEGG: shw:Sputw3181_3467 protein of unknown function RIO1; PFAM: RIO-like kinase; SMART: RIO kinase
YP_006019351.1	KEGG: shw:Sputw3181_3466 transposase IS3/IS911 family protein
YP_006019352.1	PFAM: Outer membrane protein, OmpA/MotB, C-terminal; Rickettsia 17kDa surface antigen; KEGG: son:SO_3969 OmpA family protein
YP_006019353.1	KEGG: son:SO_3966 magnesium transporter; TIGRFAM: Divalent cation transporter; PFAM: Magnesium transporter, MgtE intracellular region; Cystathionine beta-synthase, core; MgtE integral membrane region
YP_006019354.1	KEGG: shw:Sputw3181_3462 phosphotransferase system, phosphocarrier protein HPr; TIGRFAM: Phosphotransferase system, phosphocarrier HPr protein; PFAM: Phosphotransferase system, phosphocarrier HPr protein
YP_006019355.1	HAMAP: ATPase, P-loop-containing; KEGG: spc:Sputcn32_0712 hypothetical protein
YP_006019356.1	KEGG: shw:Sputw3181_3460 PTS IIA-like nitrogen-regulatory protein PtsN; TIGRFAM: Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN; PFAM: Phosphotransferase system, phosphoenolpyruvate-dependent sugar EIIA 2
YP_006019357.1	KEGG: shn:Shewana3_0671 sigma 54 modulation protein / SSU ribosomal protein S30P; TIGRFAM: Ribosomal protein S30Ae/sigma 54 modulation protein; PFAM: Ribosomal protein S30Ae/sigma 54 modulation protein
YP_006019358.1	KEGG: spc:Sputcn32_0715 RNA polymerase factor sigma-54; TIGRFAM: RNA polymerase sigma factor 54; PFAM: RNA polymerase sigma factor 54, core-binding; RNA polymerase sigma factor 54; RNA polymerase sigma factor 54, DNA-binding
YP_006019359.1	PFAM: ABC transporter-like; KEGG: shn:Shewana3_0673 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_006019360.1	KEGG: shn:Shewana3_0674 OstA family protein; TIGRFAM: Cell envelope biogenesis YhbN; PFAM: OstA-like protein
YP_006019361.1	PFAM: Protein of unknown function DUF1239; KEGG: spc:Sputcn32_0718 hypothetical protein
YP_006019362.1	TIGRFAM: Phosphatase KdsC; HAD-superfamily hydrolase, subfamily IIIA; KEGG: shn:Shewana3_0676 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; PFAM: HAD superfamily hydrolase-like, type 3
YP_006019363.1	SMART: Cystathionine beta-synthase, core; TIGRFAM: KpsF/GutQ; KEGG: she:Shewmr4_0678 KpsF/GutQ family protein; PFAM: Sugar isomerase (SIS); Cystathionine beta-synthase, core
YP_006019364.1	PFAM: ABC transporter-like; KEGG: shw:Sputw3181_3452 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_006019365.1	KEGG: shn:Shewana3_0679 hypothetical protein; TIGRFAM: Protein of unknown function DUF140; PFAM: Protein of unknown function DUF140
YP_006019366.1	PFAM: Mammalian cell entry related; KEGG: shw:Sputw3181_3450 hypothetical protein
YP_006019367.1	PFAM: Toluene tolerance; KEGG: shw:Sputw3181_3449 toluene tolerance family protein
YP_006019368.1	KEGG: shm:Shewmr7_3339 SpoIIAA family protein
YP_006019369.1	PFAM: BolA-like protein; KEGG: shw:Sputw3181_3447 BolA family protein
YP_006019370.1	PFAM: 3-phosphoshikimate 1-carboxyvinyltransferase, core; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; HAMAP: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; KEGG: shw:Sputw3181_3446 UDP-N-acetylglucosamine 1-carboxyvinyltransferase
YP_006019371.1	TIGRFAM: Peptidase S1C, DegS; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; KEGG: shw:Sputw3181_3434 periplasmic serine protease DegS; SMART: PDZ/DHR/GLGF
YP_006019372.1	SMART: PDZ/DHR/GLGF; TIGRFAM: Peptidase S1C, Do; KEGG: shn:Shewana3_0690 peptidase Do; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF
YP_006019373.1	PFAM: ATPase, AFG1-like; KEGG: she:Shewmr4_3270 AFG1 family ATPase
YP_006019374.1	KEGG: shw:Sputw3181_3431 50S ribosomal protein L13; TIGRFAM: Ribosomal protein L13, bacterial-type; PFAM: Ribosomal protein L13
YP_006019375.1	PFAM: Ribosomal protein S9; KEGG: shw:Sputw3181_3430 30S ribosomal protein S9
YP_006019376.1	PFAM: Protein of unknown function DUF2065; KEGG: shw:Sputw3181_3429 hypothetical protein
YP_006019377.1	SMART: Adenylosuccinate synthetase; TIGRFAM: Adenylosuccinate synthetase; KEGG: shw:Sputw3181_3428 adenylosuccinate synthetase; PFAM: Adenylosuccinate synthetase
YP_006019378.1	KEGG: spc:Sputcn32_0748 Sel1 domain-containing protein; PFAM: Sel1-like; SMART: Sel1-like
YP_006019379.1	KEGG: shw:Sputw3181_3426 ribonuclease R; TIGRFAM: Ribonuclease R, bacterial; Ribonuclease II/ribonuclease R, bacteria; PFAM: Ribonuclease II/R; Ribonuclease B, OB region N-terminal; Ribonuclease R winged-helix domain; Ribosomal protein S1, RNA binding domain
YP_006019380.1	KEGG: shw:Sputw3181_3425 23S rRNA (guanosine-2'-O-)-methyltransferase; TIGRFAM: RNA methyltransferase TrmH, group 3; PFAM: tRNA/rRNA methyltransferase, SpoU; RNA 2-O ribose methyltransferase, substrate binding
YP_006019381.1	PFAM: Major facilitator superfamily MFS-1; KEGG: shn:Shewana3_0699 major facilitator transporter
YP_006019382.1	PFAM: Protein of unknown function DUF481; KEGG: shn:Shewana3_0700 hypothetical protein
YP_006019383.1	TIGRFAM: Ribosomal protein S6; HAMAP: Ribosomal protein S6, bacterial-like; KEGG: shw:Sputw3181_3422 30S ribosomal protein S6; PFAM: Ribosomal protein S6, bacterial-like
YP_006019384.1	KEGG: son:SO_3929 primosomal replication protein N; HAMAP: Primosomal replication protein n; PFAM: Primosome PriB/single-strand DNA-binding
YP_006019385.1	TIGRFAM: Ribosomal protein S18; HAMAP: 30S ribosomal protein S18; KEGG: shw:Sputw3181_3420 30S ribosomal protein S18; PFAM: Ribosomal protein S18
YP_006019386.1	KEGG: shw:Sputw3181_3419 50S ribosomal protein L9; TIGRFAM: Ribosomal protein L9, bacteria/chloroplast; PFAM: Ribosomal protein L9, C-terminal; Ribosomal protein L9, N-terminal
YP_006019387.1	PFAM: Peptidase S46; KEGG: shm:Shewmr7_0691 dipeptidyl-peptidase 7
YP_006019388.1	TIGRFAM: DNA helicase, DnaB type; PFAM: DNA helicase, DnaB-like, C-terminal; DNA helicase, DnaB-like, N-terminal; KEGG: son:SO_3917 replicative DNA helicase; SMART: ATPase, AAA+ type, core
YP_006019389.1	PFAM: Alanine racemase, N-terminal; Alanine racemase, C-terminal; TIGRFAM: Alanine racemase; HAMAP: Alanine racemase; KEGG: spc:Sputcn32_0759 alanine racemase
YP_006019390.1	PFAM: CheC-like protein; KEGG: shn:Shewana3_0715 putative chemotaxis protein CheX
YP_006019391.1	KEGG: shn:Shewana3_0716 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug
YP_006019392.1	HAMAP: PKHD-type hydroxylase ybiX; PFAM: Oxoglutarate/iron-dependent oxygenase; KEGG: shn:Shewana3_0717 putative hydroxylase; SMART: Prolyl 4-hydroxylase, alpha subunit
YP_006019393.1	KEGG: shw:Sputw3181_3414 tRNA-dihydrouridine synthase A; TIGRFAM: tRNA-dihydrouridine synthase, TIM-barrel, YjbN; PFAM: tRNA-dihydrouridine synthase
YP_006019394.1	KEGG: shn:Shewana3_0719 hypothetical protein
YP_006019395.1	PFAM: PspC; KEGG: shn:Shewana3_0720 phage shock protein C, PspC
YP_006019396.1	PFAM: Crotonase, core; KEGG: shn:Shewana3_0721 enoyl-CoA hydratase
YP_006019397.1	KEGG: shw:Sputw3181_3410 hypothetical protein; manually curated; PFAM: DR1885-like metal-binding protein
YP_006019398.1	PFAM: Uncharacterised conserved protein UCP029693; KEGG: shn:Shewana3_0723 hypothetical protein
YP_006019399.1	KEGG: shw:Sputw3181_3408 hypothetical protein
YP_006019400.1	KEGG: shn:Shewana3_0725 outer membrane channel protein; TIGRFAM: Type I secretion outer membrane protein, TolC; PFAM: Outer membrane efflux protein
YP_006019401.1	TIGRFAM: Nucleoside diphosphate pyrophosphatase; KEGG: son:SO_3903 MutT/NUDIX family protein; PFAM: NUDIX hydrolase domain
YP_006019402.1	PFAM: Protein of unknown function DUF1249; KEGG: shw:Sputw3181_3405 hypothetical protein
YP_006019403.1	PFAM: Calcineurin-like phosphoesterase C-terminal; Metallophosphoesterase; KEGG: shw:Sputw3181_3404 calcineurin phosphoesterase C-terminal domain-containing protein
YP_006019404.1	PFAM: Uncharacterised protein family UPF0227; KEGG: she:Shewmr4_3232 hypothetical protein
YP_006019405.1	SMART: DNA topoisomerase, type IIA, subunit B or N-terminal; ATP-binding region, ATPase-like; TIGRFAM: DNA topoisomerase IV, subunit B, Gram-negative; KEGG: shw:Sputw3181_3402 DNA topoisomerase IV subunit B; PFAM: DNA topoisomerase, type IIA, subunit B, region 2; ATP-binding region, ATPase-like; DNA topoisomerase, type IIA, subunit B, C-terminal
YP_006019406.1	KEGG: shm:Shewmr7_0759 L-sorbosone dehydrogenase, putative
YP_006019407.1	SMART: DNA topoisomerase, type IIA, subunit A or C-terminal; TIGRFAM: DNA topoisomerase IV, subunit A, Gram-negative; KEGG: spc:Sputcn32_0775 DNA topoisomerase IV subunit A; PFAM: DNA topoisomerase, type IIA, subunit A or C-terminal; DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel
YP_006019408.1	PFAM: Porin, Gram-negative type; KEGG: slo:Shew_3260 porin
YP_006019409.1	KEGG: shn:Shewana3_0734 porin
YP_006019411.1	PFAM: UBA/THIF-type NAD/FAD binding fold; KEGG: she:Shewmr4_3226 UBA/ThiF-type NAD/FAD binding protein
YP_006019412.1	manually curated; PFAM: ATP-binding region, ATPase-like; KEGG: shm:Shewmr7_0764 periplasmic sensor signal transduction histidine kinase; SMART: ATP-binding region, ATPase-like
YP_006019413.1	KEGG: shw:Sputw3181_3397 hypothetical protein
YP_006019414.1	KEGG: shw:Sputw3181_3398 hypothetical protein
YP_006019415.1	TIGRFAM: Haemerythrin-like, metal-binding; PFAM: Chemotaxis methyl-accepting receptor, signalling; Haemerythrin/HHE cation-binding motif; KEGG: son:SO_3890 methyl-accepting chemotaxis protein; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_006019416.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Molybdate ABC transporter, ATP-binding protein; KEGG: shn:Shewana3_0741 molybdate transporter ATP-binding protein; PFAM: ABC transporter-like; Transport-associated OB, type 1
YP_006019417.1	KEGG: shn:Shewana3_0742 molybdate ABC transporter permease protein; TIGRFAM: Molybdate ABC transporter, permease protein; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_006019418.1	KEGG: shm:Shewmr7_0769 molybdenum ABC transporter, periplasmic molybdate-binding protein; TIGRFAM: Molybdenum ABC transporter, periplasmic binding protein; PFAM: Bacterial extracellular solute-binding, family 1
YP_006019419.1	KEGG: shn:Shewana3_0744 ModE family transcriptional regulator; TIGRFAM: Molybdenum-binding protein, N-terminal; Molybdenum-pterin binding; PFAM: HTH transcriptional regulator, LysR; Transport-associated OB, type 1
YP_006019420.1	KEGG: son:SO_0820 HlyD family secretion protein; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_006019421.1	PFAM: ABC transporter-like; Protein of unknown function DUF214, permase predicted; KEGG: shn:Shewana3_3455 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_006019422.1	KEGG: shw:Sputw3181_0774 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein
YP_006019423.1	PFAM: Peptidase M50; KEGG: spc:Sputcn32_3167 peptidase M50
YP_006019424.1	KEGG: shw:Sputw3181_0777 hypothetical protein
YP_006019425.1	PFAM: Protein of unknown function DUF342; KEGG: shw:Sputw3181_0778 hypothetical protein
YP_006019426.1	KEGG: shw:Sputw3181_0779 rRNA (guanine-N(2)-)-methyltransferase; HAMAP: Ribosomal RNA small subunit methyltransferase C; PFAM: Methyltransferase small; Methyltransferase small, N-terminal
YP_006019427.1	PFAM: Alkaline phosphatase; KEGG: shw:Sputw3181_0780 alkaline phosphatase; SMART: Alkaline phosphatase
YP_006019428.1	PFAM: Prokaryotic glutathione synthetase, ATP-binding; Prokaryotic glutathione synthetase, N-terminal; TIGRFAM: Glutathione synthetase, prokaryotic; HAMAP: Glutathione synthetase, prokaryotic; KEGG: shw:Sputw3181_0781 glutathione synthetase
YP_006019429.1	KEGG: shw:Sputw3181_0782 16S ribosomal RNA methyltransferase RsmE; TIGRFAM: Ribosomal RNA small subunit methyltransferase E; PFAM: Ribosomal RNA small subunit methyltransferase E
YP_006019430.1	KEGG: shw:Sputw3181_0783 deoxyribonuclease I; PFAM: Endonuclease I
YP_006019431.1	KEGG: shw:Sputw3181_0784 protein of unknown function DUF335, SprT; HAMAP: Protein sprT; SMART: Protein of unknown function SprT
YP_006019432.1	KEGG: shw:Sputw3181_0785 hypothetical protein
YP_006019433.1	KEGG: shw:Sputw3181_0786 beta-lactamase; PFAM: Penicillin-binding protein, transpeptidase
YP_006019434.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: shw:Sputw3181_0787 LysR family transcriptional regulator
YP_006019435.1	KEGG: shw:Sputw3181_0788 carbamoyl-phosphate synthase L chain, ATP-binding; PFAM: Carbamoyl phosphate synthetase, large subunit, ATP-binding; Biotin carboxylase, C-terminal; Carbamoyl phosphate synthase, large subunit, N-terminal; Biotin/lipoyl attachment; SMART: Biotin carboxylase, C-terminal
YP_006019436.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; Extracellular solute-binding protein, family 3; KEGG: son:SO_0841 GGDEF domain-containing protein; SMART: Diguanylate cyclase, predicted; Extracellular solute-binding protein, family 3
YP_006019437.1	KEGG: shm:Shewmr7_3324 elongation factor G; TIGRFAM: Translation elongation factor EFG/EF2; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal
YP_006019438.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: shw:Sputw3181_0790 LysR family transcriptional regulator
YP_006019439.1	manually curated; KEGG: she:Shewmr4_0700 hypothetical protein
YP_006019440.1	PFAM: Nitrate reductase cytochrome c-type subunit (NapB); KEGG: shm:Shewmr7_3321 periplasmic nitrate reductase subunit NapB
YP_006019441.1	PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 region; Molydopterin dinucleotide-binding region; TIGRFAM: Nitrate reductase, large subunit, periplasmic; Twin-arginine translocation pathway, signal sequence; HAMAP: Nitrate reductase, large subunit, periplasmic; KEGG: shn:Shewana3_3430 nitrate reductase catalytic subunit
YP_006019442.1	PFAM: NapD; KEGG: shw:Sputw3181_0796 NapD family protein
YP_006019443.1	PFAM: Protein of unknown function DUF2006; KEGG: shw:Sputw3181_0797 hypothetical protein
YP_006019444.1	PFAM: Protein of unknown function DUF214, permase predicted; KEGG: shw:Sputw3181_0798 hypothetical protein
YP_006019445.1	PFAM: ABC transporter-like; KEGG: shw:Sputw3181_0799 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_006019446.1	KEGG: shw:Sputw3181_0800 amino acid carrier protein; TIGRFAM: Sodium:alanine symporter; PFAM: Sodium:alanine symporter
YP_006019447.1	TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold-3; HAMP linker domain; PAS fold-4; PAS fold; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, phosphotransfer (Hpt) region; KEGG: shw:Sputw3181_0801 multi-sensor hybrid histidine kinase; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; PAC motif; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, phosphotransfer (Hpt) region
YP_006019448.1	KEGG: shw:Sputw3181_0802 response regulator receiver modulated metal dependent phosphohydrolase; PFAM: Signal transduction response regulator, receiver region; Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Signal transduction response regulator, receiver region; Metal-dependent phosphohydrolase, HD region
YP_006019449.1	KEGG: spc:Sputcn32_3140 glycine cleavage T protein (aminomethyl transferase); TIGRFAM: Folate-binding, YgfZ; PFAM: Glycine cleavage T-protein, N-terminal
YP_006019450.1	KEGG: shw:Sputw3181_0804 D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; Amino acid-binding ACT
YP_006019451.1	PFAM: Uncharacterised conserved protein UCP020606; KEGG: she:Shewmr4_0719 hypothetical protein
YP_006019452.1	KEGG: shw:Sputw3181_0806 response regulator receiver protein; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal
YP_006019453.1	PFAM: Curlin associated; KEGG: shw:Sputw3181_0807 curlin-associated protein
YP_006019454.1	PFAM: Curlin associated; KEGG: shw:Sputw3181_0808 curlin-associated protein
YP_006019455.1	KEGG: shw:Sputw3181_0809 hypothetical protein
YP_006019456.1	TIGRFAM: Pantoate-beta-alanine ligase; Cytidyltransferase-related; HAMAP: Pantoate-beta-alanine ligase; KEGG: shw:Sputw3181_0810 pantoate--beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase
YP_006019457.1	PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: Ketopantoate hydroxymethyltransferase; HAMAP: Ketopantoate hydroxymethyltransferase; KEGG: shw:Sputw3181_0811 3-methyl-2-oxobutanoate hydroxymethyltransferase
YP_006019458.1	TIGRFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; KEGG: shw:Sputw3181_0812 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK
YP_006019459.1	TIGRFAM: Poly(A) polymerase, PcnB; KEGG: shw:Sputw3181_0813 poly(A) polymerase; PFAM: Polynucleotide adenylyltransferase region
YP_006019460.1	TIGRFAM: glutamyl-queuosine tRNA(Asp) synthetase; HAMAP: Glutamyl-Q tRNA(Asp) synthetase; KEGG: spc:Sputcn32_3129 glutamate--tRNA ligase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain
YP_006019461.1	TIGRFAM: RNA polymerase-binding, DksA; KEGG: shw:Sputw3181_0815 TraR/DksA family transcriptional regulator
YP_006019462.1	TIGRFAM: Sugar fermentation stimulation protein; HAMAP: Sugar fermentation stimulation protein; KEGG: shm:Shewmr7_3291 sugar fermentation stimulation protein A; PFAM: Sugar fermentation stimulation protein
YP_006019463.1	KEGG: shw:Sputw3181_0817 aminopeptidase B; PFAM: Peptidase M17, leucyl aminopeptidase, C-terminal
YP_006019464.1	PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO_0877 acetyltransferase
YP_006019465.1	KEGG: shn:Shewana3_3400 phosphoribulokinase/uridine kinase; PFAM: Phosphoribulokinase/uridine kinase
YP_006019466.1	KEGG: shw:Sputw3181_0820 hypothetical protein
YP_006019467.1	KEGG: spc:Sputcn32_3122 alpha/beta hydrolase fold
YP_006019468.1	KEGG: shn:Shewana3_3397 hypothetical protein
YP_006019469.1	PFAM: Glucose-methanol-choline oxidoreductase, N-terminal; Glucose-methanol-choline oxidoreductase, C-terminal; KEGG: shn:Shewana3_3396 glucose-methanol-choline oxidoreductase
YP_006019470.1	KEGG: vex:VEA_000607 hypothetical protein
YP_006019471.1	KEGG: sfr:Sfri_3600 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR
YP_006019472.1	PFAM: Helix-turn-helix, HxlR type; KEGG: sfr:Sfri_3601 transcriptional regulator, HxlR family protein
YP_006019473.1	PFAM: Glutathione-dependent formaldehyde-activating, GFA; KEGG: shw:Sputw3181_0824 glutathione-dependent formaldehyde-activating, GFA
YP_006019474.1	KEGG: shn:Shewana3_3394 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02444; PFAM: Conserved hypothetical protein CHP02444
YP_006019475.1	KEGG: spc:Sputcn32_3117 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core
YP_006019476.1	KEGG: shw:Sputw3181_0827 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02443; PFAM: Conserved hypothetical protein CHP02443
YP_006019477.1	KEGG: son:SO_0116 hypothetical protein
YP_006019478.1	KEGG: she:Shewmr4_2555 hypothetical protein
YP_006019479.1	KEGG: btl:BALH_0979 hypothetical protein
YP_006019480.1	KEGG: mmw:Mmwyl1_1518 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_006019481.1	TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; Helix-turn-helix, AraC type; KEGG: mmw:Mmwyl1_1519 methylated-DNA--protein-cysteine methyltransferase; SMART: Helix-turn-helix, AraC domain
YP_006019482.1	PFAM: Pirin, N-terminal; Pirin, C-terminal; KEGG: shw:Sputw3181_0833 pirin domain-containing protein
YP_006019483.1	KEGG: spc:Sputcn32_3110 ATP-dependent RNA helicase DbpA; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; DbpA, RNA-binding; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal
YP_006019484.1	KEGG: lpn:lpg0198 hypothetical protein
YP_006019485.1	KEGG: shw:Sputw3181_0836 DEAD/DEAH box helicase domain-containing protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal
YP_006019486.1	KEGG: shm:Shewmr7_0839 hypothetical protein
YP_006019487.1	KEGG: son:SO_3781 hypothetical protein
YP_006019488.1	SMART: ATPase, AAA+ type, core; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; KEGG: shw:Sputw3181_0838 cysteine/glutathione ABC transporter membrane/ATP-binding component; PFAM: ABC transporter-like; ABC transporter, transmembrane region
YP_006019489.1	SMART: ATPase, AAA+ type, core; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; KEGG: shw:Sputw3181_0839 cysteine/glutathione ABC transporter membrane/ATP-binding component; PFAM: ABC transporter-like
YP_006019490.1	KEGG: shw:Sputw3181_0840 putative adenylyl cyclase CyaB; TIGRFAM: Adenylyl cyclase CyaB; PFAM: Adenylate cyclase
YP_006019491.1	KEGG: shn:Shewana3_0816 DNA binding domain-containing protein
YP_006019492.1	PFAM: Protein of unknown function DUF599; KEGG: shm:Shewmr7_0844 hypothetical protein
YP_006019493.1	KEGG: fps:FP1380 hypothetical protein
YP_006019494.1	KEGG: shw:Sputw3181_0845 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; TIGRFAM: Delta-1-pyrroline-5-carboxylate dehydrogenase 3; PFAM: Aldehyde dehydrogenase; Proline dehydrogenase
YP_006019495.1	KEGG: spc:Sputcn32_3098 SH3 type 3 domain-containing protein; PFAM: SH3, type 3; SMART: Bacterial SH3-like region
YP_006019496.1	PFAM: Phosphate transporter; KEGG: shw:Sputw3181_0847 phosphate transporter
YP_006019497.1	KEGG: shw:Sputw3181_0848 hypothetical protein; TIGRFAM: Protein of unknown function DUF47; PFAM: Putitive phosphate transport regulator
YP_006019498.1	PFAM: Adenylate cyclase; KEGG: shw:Sputw3181_0849 adenylate cyclase
YP_006019499.1	PFAM: Ion transport 2; KEGG: shn:Shewana3_0824 ion transport 2 domain-containing protein
YP_006019500.1	KEGG: shw:Sputw3181_0851 hypothetical protein
YP_006019501.1	KEGG: shn:Shewana3_0826 hypothetical protein
YP_006019502.1	PFAM: PspA/IM30; KEGG: shw:Sputw3181_0853 phage shock protein A, PspA
YP_006019503.1	PFAM: Protein of unknown function DUF2170; KEGG: shn:Shewana3_0828 hypothetical protein
YP_006019504.1	KEGG: shw:Sputw3181_0855 spermidine synthase; HAMAP: Spermidine synthase; PFAM: Spermine synthase
YP_006019505.1	PFAM: Protein of unknown function DUF350; KEGG: spc:Sputcn32_3088 hypothetical protein
YP_006019506.1	KEGG: spc:Sputcn32_3087 hypothetical protein
YP_006019507.1	HAMAP: Glutamate-ammonia-ligase adenylyltransferase; KEGG: shw:Sputw3181_0858 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase; PFAM: Glutamate-ammonia ligase adenylyltransferase; PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase
YP_006019508.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; GAF; KEGG: shw:Sputw3181_0859 diguanylate cyclase; SMART: Diguanylate cyclase, predicted; GAF
YP_006019509.1	PFAM: Protein of unknown function DUF897; KEGG: shw:Sputw3181_0860 hypothetical protein
YP_006019510.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: shw:Sputw3181_0861 LysR family transcriptional regulator
YP_006019511.1	KEGG: shw:Sputw3181_1958 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_006019512.1	PFAM: ATPase, AFG1-like; KEGG: shw:Sputw3181_0869 AFG1 family ATPase
YP_006019513.1	PFAM: Protein of unknown function DUF583; KEGG: she:Shewmr4_3101 hypothetical protein
YP_006019514.1	PFAM: Phosphate-selective porin O/P; KEGG: shm:Shewmr7_0872 phosphate-selective porin O and P
YP_006019515.1	KEGG: shm:Shewmr7_0873 hypothetical protein
YP_006019516.1	KEGG: she:Shewmr4_3098 putative tricarboxylic transport membrane protein
YP_006019517.1	PFAM: Protein of unknown function DUF112, transmembrane; KEGG: she:Shewmr4_3097 hypothetical protein
YP_006019518.1	KEGG: she:Shewmr4_3096 signal transduction histidine kinase regulating citrate/malate metabolism; PFAM: ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like
YP_006019520.1	KEGG: she:Shewmr4_3095 response regulator receiver/unknown domain-containing protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region
YP_006019521.1	PFAM: Peptidase M16, C-terminal; KEGG: shm:Shewmr7_0878 peptidase M16 domain-containing protein
YP_006019522.1	PFAM: Peptidase M16, N-terminal; Peptidase M16, C-terminal; KEGG: shn:Shewana3_0842 peptidase M16 domain-containing protein
YP_006019523.1	manually curated; KEGG: shn:Shewana3_0843 hypothetical protein
YP_006019524.1	KEGG: shw:Sputw3181_0871 ErfK/YbiS/YcfS/YnhG family protein; PFAM: YkuD domain; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup
YP_006019525.1	KEGG: shw:Sputw3181_0874 potassium/proton antiporter; HAMAP: Cell volume regulation protein A; PFAM: Cation/H+ exchanger; Regulator of K+ conductance, C-terminal; Transporter-associated region
YP_006019526.1	KEGG: shm:Shewmr7_0885 lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase; TIGRFAM: Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase; PFAM: Bacterial lipid A biosynthesis acyltransferase
YP_006019527.1	TIGRFAM: RfaE bifunctional protein, domain I; RfaE bifunctional protein, domain II; Cytidyltransferase-related; HAMAP: Bifunctional protein hldE; KEGG: spc:Sputcn32_3069 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; PFAM: Carbohydrate/purine kinase; Cytidylyltransferase
YP_006019528.1	KEGG: spc:Sputcn32_3068 hypothetical protein
YP_006019529.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: shw:Sputw3181_0878 TetR family transcriptional regulator
YP_006019530.1	KEGG: swp:swp_0844 hypothetical protein
YP_006019531.1	KEGG: shw:Sputw3181_0879 pyridine nucleotide transhydrogenase; PFAM: NAD(P) transhydrogenase, beta subunit
YP_006019532.1	KEGG: shw:Sputw3181_0880 NAD(P) transhydrogenase subunit alpha; TIGRFAM: NAD(P) transhydrogenase, alpha subunit; PFAM: Alanine dehydrogenase/PNT, C-terminal; Alanine dehydrogenase/PNT, N-terminal
YP_006019533.1	TIGRFAM: Sulphite reductase [NADPH] flavoprotein, alpha chain; KEGG: spc:Sputcn32_3064 sulfite reductase (NADPH) flavoprotein, alpha chain; PFAM: FAD-binding, type 1; Flavodoxin/nitric oxide synthase; Oxidoreductase FAD/NAD(P)-binding
YP_006019534.1	PFAM: Nitrite/sulphite reductase 4Fe-4S region; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; TIGRFAM: Sulphite reductase (NADPH) hemoprotein, beta subunit; HAMAP: Sulfite reductase [NADPH] hemoprotein beta-component; KEGG: shw:Sputw3181_0882 sulfite reductase subunit beta
YP_006019535.1	PFAM: Phosphoadenosine phosphosulphate reductase; TIGRFAM: Phosphoadenosine phosphosulphate reductase thioredoxin; Phosphoadenosine phosphosulphate reductase CysH-type; HAMAP: Phosphoadenosine phosphosulfate reductase; KEGG: shw:Sputw3181_0883 phosphoadenosine phosphosulfate reductase
YP_006019537.1	TIGRFAM: Monofunctional biosynthetic peptidoglycan transglycosylase; HAMAP: Monofunctional biosynthetic peptidoglycan transglycosylase; KEGG: shm:Shewmr7_0895 monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: Glycosyl transferase, family 51
YP_006019538.1	SMART: Prolyl 4-hydroxylase, alpha subunit; KEGG: son:SO_3733.1 proline hydroxylase
YP_006019539.1	KEGG: shw:Sputw3181_0885 hypothetical protein
YP_006019540.1	KEGG: she:Shewmr4_3075 hypothetical protein
YP_006019541.1	KEGG: shm:Shewmr7_0898 phospholipase A(1); PFAM: Phospholipase A1
YP_006019542.1	TIGRFAM: Uroporphyrin-III C-methyltransferase, C-terminal; KEGG: spc:Sputcn32_3044 uroporphyrin-III C-methyltransferase; PFAM: Tetrapyrrole methylase
YP_006019543.1	PFAM: Phosphoadenosine phosphosulphate reductase; TIGRFAM: Sulphate adenylyltransferase, small subunit; HAMAP: Sulfate adenylyltransferase subunit 2; KEGG: shw:Sputw3181_0902 sulfate adenylyltransferase subunit 2
YP_006019544.1	PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; TIGRFAM: Sulphate adenylyltransferase, large subunit; HAMAP: Sulfate adenylyltransferase subunit 1; KEGG: shw:Sputw3181_0903 sulfate adenylyltransferase subunit 1
YP_006019545.1	PFAM: Regulator of K+ conductance, C-terminal; Divalent ion symporter; KEGG: shw:Sputw3181_0904 TrkA domain-containing protein
YP_006019546.1	PFAM: Adenylylsulphate kinase, C-terminal; TIGRFAM: Adenylylsulphate kinase, C-terminal; HAMAP: Adenylyl-sulfate kinase; KEGG: shw:Sputw3181_0905 adenylylsulfate kinase
YP_006019547.1	KEGG: shn:Shewana3_0867 ATPase domain-containing protein; PFAM: ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like
YP_006019548.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; KEGG: shn:Shewana3_0868 diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region
YP_006019549.1	KEGG: spc:Sputcn32_3039 hypothetical protein
YP_006019550.1	PFAM: Major facilitator superfamily MFS-1; KEGG: she:Shewmr4_3067 major facilitator transporter
YP_006019551.1	KEGG: shw:Sputw3181_0907 protoporphyrinogen oxidase; PFAM: Flavodoxin/nitric oxide synthase
YP_006019552.1	KEGG: son:SO_3719 hypothetical protein
YP_006019553.1	PFAM: DSBA oxidoreductase; KEGG: shn:Shewana3_0874 DsbA oxidoreductase
YP_006019555.1	KEGG: son:SO_3716 DnaJ domain-containing protein; PFAM: Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal
YP_006019556.1	KEGG: shw:Sputw3181_0911 dihydropteridine reductase; PFAM: Nitroreductase-like
YP_006019557.1	KEGG: shn:Shewana3_3935 hypothetical protein
YP_006019559.1	KEGG: pol:Bpro_5210 hypothetical protein
YP_006019560.1	PFAM: ABC transporter-like; KEGG: shw:Sputw3181_0916 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_006019561.1	KEGG: shw:Sputw3181_0917 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_006019562.1	KEGG: shw:Sputw3181_0918 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3
YP_006019563.1	KEGG: shn:Shewana3_0883 hypothetical protein
YP_006019564.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: shm:Shewmr7_0921 LysR family transcriptional regulator
YP_006019565.1	PFAM: LrgA; KEGG: shn:Shewana3_0885 LrgA family protein
YP_006019566.1	PFAM: LrgB-like protein; KEGG: shw:Sputw3181_0921 LrgB family protein
YP_006019567.1	PFAM: GCN5-related N-acetyltransferase; KEGG: shn:Shewana3_0887 GCN5-related N-acetyltransferase
YP_006019568.1	PFAM: Peptidase S11, D-alanyl-D-alanine carboxypeptidase A; KEGG: she:Shewmr4_0828 D-alanyl-D-alanine endopeptidase
YP_006019569.1	PFAM: Peptidase S54, rhomboid; KEGG: shw:Sputw3181_3263 rhomboid family protein
YP_006019570.1	PFAM: Sodium/calcium exchanger membrane region; KEGG: shw:Sputw3181_3262 sodium/calcium exchanger membrane region
YP_006019571.1	KEGG: shm:Shewmr7_3193 hypothetical protein
YP_006019572.1	PFAM: MORN variant; KEGG: shn:Shewana3_3288 MORN repeat-containing protein
YP_006019573.1	KEGG: son:SO_1004 hypothetical protein
YP_006019574.1	PFAM: Na dependent nucleoside transporter, C-terminal; Na dependent nucleoside transporter; Nucleoside recognition; KEGG: swd:Swoo_2675 Na+ dependent nucleoside transporter
YP_006019575.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: swd:Swoo_2676 LysR family transcriptional regulator
YP_006019576.1	PFAM: Dienelactone hydrolase; KEGG: she:Shewmr4_0833 twin-arginine translocation pathway signal
YP_006019577.1	KEGG: sfr:Sfri_0858 cytochrome c, class I; PFAM: Cytochrome c, class I
YP_006019578.1	PFAM: [2Fe-2S]-binding; Ferredoxin; KEGG: sfr:Sfri_0859 2Fe-2S iron-sulfur cluster binding domain-containing protein
YP_006019579.1	KEGG: sfr:Sfri_0860 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding
YP_006019580.1	KEGG: gsu:GSU0763 helicase
YP_006019581.1	KEGG: spc:Sputcn32_2967 hypothetical protein
YP_006019582.1	KEGG: spc:Sputcn32_2966 hypothetical protein
YP_006019583.1	TIGRFAM: PAS; PFAM: Chemotaxis methyl-accepting receptor, signalling; PAS fold-3; KEGG: spc:Sputcn32_2969 methyl-accepting chemotaxis sensory transducer; SMART: Chemotaxis methyl-accepting receptor, signalling; PAC motif
YP_006019585.1	KEGG: bid:Bind_1276 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_006019586.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: swd:Swoo_2966 LysR family transcriptional regulator
YP_006019587.1	TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase; KEGG: shw:Sputw3181_0982 B12-dependent methionine synthase; PFAM: Homocysteine S-methyltransferase; Dihydropteroate synthase, DHPS; Methionine synthase, cobalamin (vitamin B12)-binding module, cap; Cobalamin (vitamin B12)-binding; Vitamin B12 dependent methionine synthase, activation region
YP_006019588.1	PFAM: Phosphoglycerate mutase; KEGG: shw:Sputw3181_0983 phosphoglycerate mutase
YP_006019589.1	PFAM: ABC transporter-like; KEGG: spc:Sputcn32_2963 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_006019590.1	KEGG: spc:Sputcn32_2962 transport system permease protein; manually curated; PFAM: Bacterial transport system permease protein
YP_006019591.1	PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like, core; TIGRFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, core, prokaryotic; HAMAP: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, core, prokaryotic; KEGG: spc:Sputcn32_2961 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
YP_006019592.1	TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobS, cobalamin-5-phosphate synthase; HAMAP: Cobalamin (vitamin B12) biosynthesis CobS, cobalamin-5-phosphate synthase; KEGG: shw:Sputw3181_0987 cobalamin synthase; PFAM: Cobalamin (vitamin B12) biosynthesis CobS, cobalamin-5-phosphate synthase
YP_006019593.1	KEGG: spc:Sputcn32_2959 cobalbumin biosynthesis enzyme; PFAM: Cobinamide kinase/cobinamide phosphate guanyltransferase
YP_006019594.1	TIGRFAM: Cobyric acid synthase CobQ; HAMAP: Cobyric acid synthase CobQ; KEGG: spc:Sputcn32_2958 cobyric acid synthase; PFAM: CobB/CobQ-like glutamine amidotransferase; Cobyrinic acid a,c-diamide synthase
YP_006019595.1	TIGRFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR; KEGG: spc:Sputcn32_2957 cob(I)yrinic acid a,c-diamide adenosyltransferase; PFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR
YP_006019596.1	PFAM: Protein of unknown function DUF2235; KEGG: shw:Sputw3181_0994 hypothetical protein
YP_006019597.1	PFAM: Periplasmic binding protein; KEGG: spc:Sputcn32_2947 periplasmic binding protein
YP_006019598.1	KEGG: shw:Sputw3181_0996 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase
YP_006019599.1	KEGG: spc:Sputcn32_2945 glycerol dehydrogenase; PFAM: Alcohol dehydrogenase, iron-type
YP_006019600.1	KEGG: sfr:Sfri_4014 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911
YP_006019601.1	PFAM: FRG domain; KEGG: spc:Sputcn32_2997 hypothetical protein
YP_006019602.1	PFAM: Asp/Glu/hydantoin racemase; TIGRFAM: Glutamate racemase; HAMAP: Glutamate racemase; KEGG: shw:Sputw3181_0949 glutamate racemase
YP_006019603.1	PFAM: Protein of unknown function DUF1486; KEGG: shn:Shewana3_3265 hypothetical protein
YP_006019604.1	KEGG: shw:Sputw3181_0952 hypothetical protein
YP_006019605.1	PFAM: Amidohydrolase 1; TIGRFAM: Dihydroorotase homodimeric type; HAMAP: Dihydroorotase; KEGG: spc:Sputcn32_2994 dihydroorotase
YP_006019606.1	TIGRFAM: Secretion protein HlyD; KEGG: shw:Sputw3181_0954 RND family efflux transporter MFP subunit
YP_006019607.1	KEGG: shw:Sputw3181_0955 hypothetical protein
YP_006019608.1	PFAM: ABC transporter-like; KEGG: spc:Sputcn32_2991 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_006019609.1	PFAM: Protein of unknown function DUF214, permase predicted; KEGG: spc:Sputcn32_2990 hypothetical protein
YP_006019610.1	PFAM: Protein of unknown function DUF214, permase predicted; KEGG: shw:Sputw3181_0958 hypothetical protein
YP_006019611.1	KEGG: shw:Sputw3181_0959 two component, sigma54 specific, fis family transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core
YP_006019612.1	KEGG: spc:Sputcn32_2987 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; SMART: ATP-binding region, ATPase-like
YP_006019613.1	PFAM: Curli assembly protein CsgE; KEGG: shw:Sputw3181_0961 curli production assembly/transport component CsgE, putative
YP_006019614.1	PFAM: Curli production assembly/transport component CsgF; KEGG: shw:Sputw3181_0962 curli production assembly/transport component CsgF, putative
YP_006019615.1	PFAM: Curli production assembly/transport component CsgG; KEGG: shw:Sputw3181_0963 curli production assembly/transport component CsgG
YP_006019616.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: shw:Sputw3181_0964 TetR family transcriptional regulator
YP_006019617.1	KEGG: spc:Sputcn32_2982 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase
YP_006019618.1	KEGG: shw:Sputw3181_0966 hypothetical protein
YP_006019619.1	PFAM: UspA; KEGG: shm:Shewmr7_3148 UspA domain-containing protein
YP_006019620.1	PFAM: UspA; KEGG: son:SO_3680 universal stress protein
YP_006019621.1	KEGG: shw:Sputw3181_0968 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3
YP_006019622.1	PFAM: Protein of unknown function DUF924, bacterial; KEGG: shn:Shewana3_3246 hypothetical protein
YP_006019623.1	PFAM: Uncharacterised conserved protein UCP037266; KEGG: shw:Sputw3181_0969 hypothetical protein
YP_006019625.1	PFAM: Xanthine/uracil/vitamin C permease; KEGG: shn:Shewana3_0953 xanthine/uracil/vitamin C permease
YP_006019626.1	SMART: Pseudouridine synthase/archaeosine transglycosylase; TIGRFAM: Glutamate 5-kinase, ProB-related; KEGG: shw:Sputw3181_0971 gamma-glutamyl kinase; HAMAP: Glutamate 5-kinase; PFAM: Aspartate/glutamate/uridylate kinase; Pseudouridine synthase/archaeosine transglycosylase
YP_006019627.1	PFAM: Aldehyde dehydrogenase; TIGRFAM: Gamma-glutamyl phosphate reductase GPR; HAMAP: Glutamate-5-semialdehyde dehydrogenase; KEGG: spc:Sputcn32_2975 gamma-glutamyl phosphate reductase
YP_006019628.1	KEGG: spc:Sputcn32_2974 hypothetical protein
YP_006019629.1	KEGG: shw:Sputw3181_0974 YbaK/EbsC protein; TIGRFAM: Conserved hypothetical protein CHP00011; PFAM: YbaK/aminoacyl-tRNA synthetase associated region
YP_006019631.1	PFAM: Protein of unknown function DUF6, transmembrane; KEGG: shw:Sputw3181_0975 hypothetical protein
YP_006019632.1	KEGG: shw:Sputw3181_0976 molecular chaperone DnaK; TIGRFAM: Chaperone DnaK; PFAM: Heat shock protein 70
YP_006019633.1	SMART: Heat shock protein DnaJ, N-terminal; TIGRFAM: Chaperone DnaJ; KEGG: spc:Sputcn32_2970 chaperone protein DnaJ; HAMAP: Chaperone protein dnaJ; PFAM: Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, cysteine-rich region; Heat shock protein DnaJ, N-terminal
YP_006019634.1	KEGG: vex:VEA_000390 phenazine biosynthesis protein PhzF; TIGRFAM: Phenazine biosynthesis PhzC/PhzF protein; PFAM: Phenazine biosynthesis PhzC/PhzF protein
YP_006019636.1	KEGG: svo:SVI_0372 hypothetical protein
YP_006019637.1	KEGG: spc:Sputcn32_2944 DEAD/DEAH box helicase domain-containing protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal
YP_006019638.1	PFAM: GCN5-related N-acetyltransferase; KEGG: shn:Shewana3_0963 GCN5-related N-acetyltransferase
YP_006019639.1	PFAM: Peptidase M48, Ste24p; KEGG: shw:Sputw3181_0999 peptidase M48, Ste24p
YP_006019640.1	PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal; Peptidyl-prolyl cis-trans isomerase, FKBP-type; KEGG: shw:Sputw3181_1000 peptidylprolyl isomerase, FKBP-type
YP_006019641.1	PFAM: Dihydrodipicolinate reductase; TIGRFAM: Dihydrodipicolinate reductase, bacterial/plant; HAMAP: Dihydrodipicolinate reductase; KEGG: son:SO_1140 dihydrodipicolinate reductase
YP_006019642.1	TIGRFAM: Carbamoyl phosphate synthase, small subunit; KEGG: shn:Shewana3_0967 carbamoyl phosphate synthase small subunit; PFAM: Carbamoyl phosphate synthase, small subunit, N-terminal; Glutamine amidotransferase class-I, C-terminal
YP_006019643.1	TIGRFAM: Carbamoyl phosphate synthase, large subunit, glutamine-dependent; KEGG: shw:Sputw3181_1003 carbamoyl phosphate synthase large subunit; PFAM: Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Carbamoyl phosphate synthetase, large subunit, oligomerisation; MGS-like
YP_006019644.1	PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: shw:Sputw3181_1004 pseudouridine synthase
YP_006019645.1	KEGG: spc:Sputcn32_2937 hypothetical protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3
YP_006019646.1	KEGG: son:SO_1144 methyl-accepting chemotaxis protein; PFAM: Chemotaxis methyl-accepting receptor, signalling; SMART: Chemotaxis methyl-accepting receptor, signalling
YP_006019647.1	KEGG: shw:Sputw3181_1007 magnesium transporter; TIGRFAM: Divalent cation transporter; PFAM: MgtE integral membrane region; Magnesium transporter, MgtE intracellular region; Cystathionine beta-synthase, core
YP_006019648.1	KEGG: shw:Sputw3181_1008 hypothetical protein
YP_006019649.1	PFAM: Endonuclease/exonuclease/phosphatase; KEGG: spc:Sputcn32_2933 endonuclease/exonuclease/phosphatase
YP_006019650.1	PFAM: Protein of unknown function DUF2063; KEGG: shn:Shewana3_0974 hypothetical protein
YP_006019651.1	KEGG: shn:Shewana3_0975 hypothetical protein; HAMAP: UPF0276 protein; PFAM: Protein of unknown function DUF692
YP_006019652.1	KEGG: shm:Shewmr7_1010 putative lipoprotein
YP_006019653.1	KEGG: shw:Sputw3181_1012 PUA domain-containing protein; HAMAP: Ribosomal RNA large subunit methyltransferase I; SMART: Pseudouridine synthase/archaeosine transglycosylase
YP_006019654.1	PFAM: Ribose 5-phosphate isomerase; TIGRFAM: Ribose 5-phosphate isomerase; HAMAP: Ribose-5-phosphate isomerase, subgroup; KEGG: spc:Sputcn32_2931 ribose-5-phosphate isomerase A
YP_006019655.1	PFAM: Protein of unknown function DUF808; KEGG: spc:Sputcn32_2930 hypothetical protein
YP_006019656.1	KEGG: shw:Sputw3181_1015 3'-5' exonuclease; PFAM: 3'-5' exonuclease; SMART: 3'-5' exonuclease
YP_006019658.1	KEGG: shw:Sputw3181_1016 hypothetical protein
YP_006019659.1	PFAM: SEC-C motif; KEGG: spc:Sputcn32_2927 SecC motif-containing protein
YP_006019660.1	KEGG: shw:Sputw3181_1021 hypothetical protein
YP_006019661.1	KEGG: spc:Sputcn32_2881 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug
YP_006019662.1	KEGG: shw:Sputw3181_1023 hypothetical protein
YP_006019663.1	PFAM: Ferritin/Dps protein; KEGG: shw:Sputw3181_1024 ferritin, Dps family protein
YP_006019664.1	KEGG: shw:Sputw3181_1025 hypothetical protein
YP_006019665.1	KEGG: shm:Shewmr7_1048 SSU ribosomal protein S18P alanine acetyltransferase; TIGRFAM: Ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase
YP_006019666.1	KEGG: shw:Sputw3181_1027 lipoyl synthase; PFAM: Radical SAM; TIGRFAM: Lipoate synthase; HAMAP: Lipoate synthase; SMART: Elongator protein 3/MiaB/NifB
YP_006019667.1	PFAM: Biotin/lipoate A/B protein ligase; TIGRFAM: Octanoyltransferase; HAMAP: Octanoyltransferase; KEGG: spc:Sputcn32_2875 lipoate-protein ligase B
YP_006019668.1	KEGG: shw:Sputw3181_1029 hypothetical protein; HAMAP: Protein of unknown function DUF493; PFAM: Protein of unknown function DUF493
YP_006019669.1	KEGG: shm:Shewmr7_1052 penicillin-binding protein 6; PFAM: Peptidase S11, D-alanyl-D-alanine carboxypeptidase A; Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal
YP_006019670.1	KEGG: shw:Sputw3181_1031 rare lipoprotein A; TIGRFAM: Rare lipoprotein A, bacterial; PFAM: Rare lipoprotein A; Sporulation/cell division region, bacteria
YP_006019671.1	TIGRFAM: Lytic murein transglycosylase B; KEGG: spc:Sputcn32_2871 lytic murein transglycosylase B
YP_006019672.1	KEGG: shm:Shewmr7_1055 rod shape-determining protein RodA; TIGRFAM: Rod shape-determining protein RodA; PFAM: Cell cycle protein
YP_006019673.1	PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; manually curated; KEGG: shn:Shewana3_0995 peptidoglycan glycosyltransferase; TIGRFAM: Penicillin-binding protein 2
YP_006019674.1	PFAM: SPOUT methyltransferase, predicted; manually curated; TIGRFAM: Conserved hypothetical protein CHP00246; KEGG: shw:Sputw3181_1035 rRNA large subunit methyltransferase; HAMAP: Ribosomal RNA large subunit methyltransferase H
YP_006019675.1	KEGG: shw:Sputw3181_1036 iojap-like protein; TIGRFAM: Iojap-related protein; PFAM: Iojap-related protein
YP_006019676.1	PFAM: Cytidylyltransferase; TIGRFAM: Probable nicotinate-nucleotide adenylyltransferase; Cytidyltransferase-related; HAMAP: nicotinate-nucleotide adenylyltransferase; KEGG: spc:Sputcn32_2866 nicotinate (nicotinamide) nucleotide adenylyltransferase
YP_006019677.1	TIGRFAM: DNA polymerase III, delta subunit; KEGG: spc:Sputcn32_2865 DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta
YP_006019678.1	PFAM: Rare lipoprotein B; KEGG: shn:Shewana3_1000 rare lipoprotein B
YP_006019679.1	TIGRFAM: Leucyl-tRNA synthetase, class Ia, bacterial/mitochondrial; KEGG: spc:Sputcn32_2863 leucyl-tRNA synthetase
YP_006019680.1	PFAM: Protein of unknown function DUF1451; KEGG: shn:Shewana3_1002 hypothetical protein
YP_006019681.1	PFAM: Methyltransferase-16, putative; KEGG: shw:Sputw3181_1042 histidine kinase
YP_006019682.1	KEGG: spc:Sputcn32_2860 methylation site containing protein
YP_006019683.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; manually curated; TIGRFAM: Apolipoprotein N-acyltransferase; KEGG: shw:Sputw3181_1045 apolipoprotein N-acyltransferase; HAMAP: Apolipoprotein N-acyltransferase
YP_006019684.1	PFAM: Cystathionine beta-synthase, core; Transporter-associated region; KEGG: shw:Sputw3181_1046 CBS domain-containing protein
YP_006019685.1	KEGG: she:Shewmr4_1002 putative metalloprotease; TIGRFAM: Uncharacterised protein family UPF0054; PFAM: Uncharacterised protein family UPF0054
YP_006019686.1	PFAM: PhoH-like protein; KEGG: shw:Sputw3181_1048 PhoH family protein
YP_006019687.1	SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: tRNA-i(6)A37 modification enzyme MiaB; Methylthiotransferase; KEGG: shw:Sputw3181_1049 (dimethylallyl)adenosine tRNA methylthiotransferase; HAMAP: tRNA-i(6)A37 modification enzyme MiaB; PFAM: Methylthiotransferase, N-terminal; Radical SAM; Deoxyribonuclease/rho motif-related TRAM
YP_006019688.1	KEGG: shm:Shewmr7_1070 hypothetical protein
YP_006019689.1	KEGG: spc:Sputcn32_2854 UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6; PFAM: FAD dependent oxidoreductase
YP_006019690.1	PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: Peptidyl-tRNA hydrolase; HAMAP: Peptidyl-tRNA hydrolase; KEGG: son:SO_1184 peptidyl-tRNA hydrolase
YP_006019691.1	KEGG: shw:Sputw3181_1052 GTP-dependent nucleic acid-binding protein EngD; TIGRFAM: Conserved hypothetical protein CHP00092; PFAM: Protein of unknown function DUF933; GTP-binding protein, HSR1-related
YP_006019693.1	KEGG: son:SO_1187 hypothetical protein
YP_006019694.1	PFAM: PepSY-associated TM helix; KEGG: spc:Sputcn32_2850 PepSY-associated TM helix domain-containing protein
YP_006019695.1	PFAM: Uncharacterised conserved protein UCP014995; KEGG: son:SO_1189 hypothetical protein
YP_006019696.1	PFAM: Nickel transport complex, NikM subunit, transmembrane; KEGG: shn:Shewana3_1016 hypothetical protein
YP_006019697.1	TIGRFAM: Prokaryotic transcription elongation factor GreA; HAMAP: Transcription elongation factor greA; KEGG: shw:Sputw3181_1057 transcription elongation factor GreA; PFAM: Transcription elongation factor, GreA/GreB region, prokaryotic
YP_006019698.1	KEGG: spc:Sputcn32_2846 hypothetical protein
YP_006019699.1	KEGG: shw:Sputw3181_1059 preprotein translocase subunit SecD; TIGRFAM: SecD export membrane protein; SecD/SecF/SecDF export membrane protein; PFAM: SecD/SecF/SecDF export membrane protein
YP_006019700.1	KEGG: shn:Shewana3_1020 preprotein translocase subunit SecF; TIGRFAM: SecF protein; SecD/SecF/SecDF export membrane protein; PFAM: SecD/SecF/SecDF export membrane protein
YP_006019701.1	KEGG: shw:Sputw3181_1061 hypothetical protein; TIGRFAM: RNA-binding, CRM domain, prokaryote; PFAM: RNA-binding, CRM domain
YP_006019702.1	KEGG: shm:Shewmr7_1083 23S rRNA methyltransferase J; HAMAP: Ribosomal RNA large subunit methyltransferase E; PFAM: Ribosomal RNA methyltransferase RrmJ/FtsJ
YP_006019703.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Peptidase M41, FtsH; KEGG: spc:Sputcn32_2841 ATP-dependent metalloprotease FtsH; PFAM: Peptidase M41; ATPase, AAA-type, core; Peptidase M41, FtsH extracellular
YP_006019704.1	TIGRFAM: Dihydropteroate synthase; KEGG: shw:Sputw3181_1064 dihydropteroate synthase; PFAM: Dihydropteroate synthase, DHPS
YP_006019705.1	TIGRFAM: Phosphoglucosamine mutase; KEGG: spc:Sputcn32_2839 phosphoglucosamine mutase; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal
YP_006019706.1	TIGRFAM: Triosephosphate isomerase; KEGG: shw:Sputw3181_1066 triosephosphate isomerase; PFAM: Triosephosphate isomerase
YP_006019707.1	KEGG: son:SO_1201 preprotein translocase subunit SecG; TIGRFAM: Preprotein translocase SecG subunit; PFAM: Preprotein translocase SecG subunit
YP_006019708.1	KEGG: shn:Shewana3_1028 hypothetical protein; HAMAP: Uncharacterised protein family UPF0090, bacteria; PFAM: Uncharacterised protein family UPF0090
YP_006019709.1	KEGG: shw:Sputw3181_1069 transcription elongation factor NusA; TIGRFAM: Transcription termination factor NusA; Transcription termination factor NusA, C-terminal duplication; PFAM: Transcription factor NusA, N-terminal; Ribosomal protein S1, RNA binding domain
YP_006019710.1	KEGG: shw:Sputw3181_1070 translation initiation factor IF-2; TIGRFAM: Initiation factor 2; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation initiation factor IF-2, N-terminal; Initiation factor 2 associated region, bacterial; Translation elongation factor EFTu/EF1A, domain 2
YP_006019711.1	TIGRFAM: Ribosome-binding factor A; HAMAP: Ribosome-binding factor A; KEGG: shw:Sputw3181_1071 ribosome-binding factor A; PFAM: Ribosome-binding factor A
YP_006019712.1	TIGRFAM: Pseudouridine synthase II, TruB, N-terminal, bacterial-type; HAMAP: tRNA pseudouridine synthase B; KEGG: shw:Sputw3181_1072 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II, TruB, N-terminal; Pseudouridine synthase II, TruB, subfamily 1, C-terminal, bacterial-type
YP_006019713.1	manually curated; TIGRFAM: Ribosomal protein S15, bacterial-type; KEGG: sfr:Sfri_0993 30S ribosomal protein S15; PFAM: Ribosomal protein S15
YP_006019714.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; HAMP linker domain; KEGG: shm:Shewmr7_1095 diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted
YP_006019715.1	PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; K Homology, type 1, subgroup; Ribosomal protein S1, RNA binding domain; TIGRFAM: Polyribonucleotide nucleotidyltransferase; HAMAP: Polyribonucleotide nucleotidyltransferase; KEGG: shw:Sputw3181_1075 polynucleotide phosphorylase/polyadenylase
YP_006019716.1	PFAM: Tetratricopeptide TPR-1; KEGG: son:SO_1210 lipoprotein NlpI
YP_006019717.1	KEGG: spc:Sputcn32_2827 peptide chain release factor 3; TIGRFAM: Peptide chain release factor 3; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2
YP_006019718.1	KEGG: shw:Sputw3181_1185 hypothetical protein
YP_006019719.1	PFAM: Deoxyribonuclease, TatD-related; KEGG: shw:Sputw3181_1186 TatD-related deoxyribonuclease
YP_006019720.1	KEGG: shw:Sputw3181_1187 nucleoside transporter; TIGRFAM: Concentrative nucleoside transporter, metazoan/bacterial; PFAM: Na dependent nucleoside transporter, C-terminal; Na dependent nucleoside transporter; Nucleoside recognition
YP_006019721.1	PFAM: Nucleoside-specific channel-forming protein, Tsx-like; KEGG: sdn:Sden_1024 nucleoside-specific channel-forming protein, Tsx
YP_006019722.1	PFAM: Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; TIGRFAM: Deoxyribose-phosphate aldolase; HAMAP: Deoxyribose-phosphate aldolase; KEGG: shw:Sputw3181_1189 deoxyribose-phosphate aldolase
YP_006019723.1	PFAM: Glycosyl transferase, family 3; Glycosyl transferase, family 3, N-terminal; Pyrimidine nucleoside phosphorylase, C-terminal; TIGRFAM: Thymidine phosphorylase; Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic; HAMAP: Thymidine phosphorylase; KEGG: shw:Sputw3181_1190 thymidine phosphorylase
YP_006019724.1	TIGRFAM: Phosphopentomutase; HAMAP: Phosphopentomutase; KEGG: shw:Sputw3181_1191 phosphopentomutase
YP_006019725.1	TIGRFAM: Purine nucleoside phosphorylase; KEGG: spc:Sputcn32_2819 purine nucleoside phosphorylase; PFAM: Nucleoside phosphorylase
YP_006019726.1	PFAM: Virulence factor, haemolysin regulator; KEGG: shw:Sputw3181_1193 membrane protein
YP_006019727.1	TIGRFAM: Phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB, PSPase-like; KEGG: spc:Sputcn32_2817 phosphoserine phosphatase SerB; PFAM: Haloacid dehalogenase-like hydrolase
YP_006019728.1	manually curated; KEGG: spc:Sputcn32_2816 alpha/beta hydrolase fold
YP_006019729.1	PFAM: Type IV pilus assembly PilZ; KEGG: shw:Sputw3181_1196 type IV pilus assembly PilZ
YP_006019730.1	KEGG: shw:Sputw3181_1197 DNA repair protein RadA; TIGRFAM: DNA repair protein RadA; SMART: ATPase, AAA+ type, core
YP_006019731.1	PFAM: Type IV pilus assembly PilZ; KEGG: shw:Sputw3181_1198 type IV pilus assembly PilZ
YP_006019732.1	KEGG: she:Shewmr4_1047 DNA-binding transcriptional regulator TorR; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region
YP_006019733.1	KEGG: she:Shewmr4_1048 TMAO reductase system periplasmic protein TorT; TIGRFAM: TMAO reductase system periplasmic, TorT; PFAM: Periplasmic binding protein/LacI transcriptional regulator
YP_006019734.1	TIGRFAM: Signal transduction histidine kinase, TMAO sensor TorS; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, phosphotransfer (Hpt) region; KEGG: she:Shewmr4_1049 multi-sensor hybrid histidine kinase; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; Signal transduction response regulator, receiver region
YP_006019735.1	HAMAP: Chaperone protein torD; KEGG: shn:Shewana3_1054 chaperone protein TorD
YP_006019736.1	TIGRFAM: Trimethylamine-N-oxide reductase TorA; Twin-arginine translocation pathway, signal sequence; KEGG: shm:Shewmr7_1116 trimethylamine-N-oxide reductase TorA; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide-binding region
YP_006019737.1	KEGG: shm:Shewmr7_1117 trimethylamine-N-oxide reductase C-type cytochrome TorC; TIGRFAM: Membrane-bound tetrahaem cytochrome TorC/YecK; PFAM: NapC/NirT cytochrome c, N-terminal
YP_006019738.1	KEGG: shn:Shewana3_1057 periplasmic nitrate reductase NapE; TIGRFAM: Trimethylamine N-oxide reductase system, TorE; PFAM: Nitrate/trimethylamine N-oxide reductase NapE/TorE
YP_006019739.1	PFAM: Xanthine/uracil/vitamin C permease; KEGG: shw:Sputw3181_1199 xanthine/uracil/vitamin C permease
YP_006019740.1	KEGG: shw:Sputw3181_1200 CBS domain-containing protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core
YP_006019741.1	KEGG: spc:Sputcn32_2810 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase
YP_006019742.1	PFAM: Metallophosphoesterase; KEGG: spc:Sputcn32_2809 metallophosphoesterase
YP_006019744.1	manually curated; KEGG: shw:Sputw3181_0120 hypothetical protein
YP_006019745.1	PFAM: Nucleoside recognition; KEGG: shn:Shewana3_1062 nucleoside recognition domain-containing protein
YP_006019746.1	KEGG: shw:Sputw3181_1205 hypothetical protein
YP_006019747.1	PFAM: Peptidase U32; KEGG: son:SO_1248 peptidase
YP_006019748.1	PFAM: Peptidase U32; KEGG: shw:Sputw3181_1207 peptidase U32
YP_006019749.1	PFAM: Sterol-binding; KEGG: shw:Sputw3181_1208 sterol-binding domain-containing protein
YP_006019750.1	KEGG: swd:Swoo_2373 peptidase S8/S53 subtilisin kexin sedolisin; PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; Proteinase inhibitor I9, subtilisin propeptide; Peptidase, C-terminal, archaeal/bacterial
YP_006019751.1	PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: shm:Shewmr7_1135 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_006019752.1	PFAM: Peptidase U32; KEGG: shw:Sputw3181_1210 peptidase U32
YP_006019753.1	PFAM: Metal-dependent hydrolase HDOD; KEGG: shm:Shewmr7_1137 putative signal transduction protein
YP_006019754.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; KEGG: spc:Sputcn32_2800 diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted
YP_006019755.1	PFAM: Thioesterase superfamily; KEGG: spc:Sputcn32_2799 thioesterase superfamily protein
YP_006019756.1	KEGG: spc:Sputcn32_2798 putative CheW protein; PFAM: Signal transduction response regulator, receiver region; CheW-like protein; SMART: Signal transduction response regulator, receiver region; CheW-like protein
YP_006019757.1	SMART: Adenylosuccinate synthetase; HAMAP: Adenylosuccinate synthetase; KEGG: shw:Sputw3181_1215 adenylosuccinate synthase; PFAM: Adenylosuccinate synthetase
YP_006019758.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: shw:Sputw3181_1216 LysR family transcriptional regulator
YP_006019759.1	PFAM: Extracellular solute-binding protein, family 3; KEGG: shw:Sputw3181_1217 extracellular solute-binding protein
YP_006019760.1	PFAM: Transmembrane pair, bacterial; KEGG: vha:VIBHAR_01850 hypothetical protein
YP_006019761.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: cps:CPS_0421 LysR family transcriptional regulator
YP_006019762.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: spc:Sputcn32_2793 TetR family transcriptional regulator
YP_006019763.1	KEGG: shw:Sputw3181_1220 RND family efflux transporter MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_006019764.1	KEGG: shw:Sputw3181_1221 hydrophobe/amphiphile efflux-1 (HAE1) family protein; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; PFAM: Acriflavin resistance protein
YP_006019765.1	KEGG: she:Shewmr4_1076 hypothetical protein
YP_006019766.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; HAMP linker domain; KEGG: she:Shewmr4_1077 diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; HAMP linker domain
YP_006019767.1	KEGG: she:Shewmr4_1078 hypothetical protein
YP_006019768.1	PFAM: Globin, truncated bacterial-like; KEGG: she:Shewmr4_1079 globin
YP_006019769.1	PFAM: Protein of unknown function DUF88; KEGG: spc:Sputcn32_2790 hypothetical protein
YP_006019770.1	KEGG: svo:SVI_2415 AraC-type DNA-binding domain-containing protein; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_006019771.1	PFAM: Protein of unknown function DUF6, transmembrane; KEGG: swd:Swoo_2094 hypothetical protein
YP_006019772.1	KEGG: spc:Sputcn32_2789 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_006019773.1	KEGG: shw:Sputw3181_1224 Bcr/CflA subfamily drug resistance transporter; TIGRFAM: Drug resistance transporter Bcr/CflA subfamily; PFAM: Major facilitator superfamily MFS-1
YP_006019774.1	PFAM: Acriflavin resistance protein; KEGG: shw:Sputw3181_1225 acriflavin resistance protein
YP_006019775.1	KEGG: shw:Sputw3181_1226 RND family efflux transporter MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_006019776.1	PFAM: Extracellular solute-binding protein, family 3; KEGG: son:SO_3481 hypothetical protein
YP_006019777.1	KEGG: shn:Shewana3_1086 metallophosphoesterase; PFAM: Metallophosphoesterase; SMART: Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase
YP_006019778.1	KEGG: spc:Sputcn32_2785 ketosteroid isomerase-like protein
YP_006019779.1	KEGG: spc:Sputcn32_2784 putative protein-disulfide isomerase
YP_006019780.1	KEGG: shw:Sputw3181_1229 beta-lactamase domain-containing protein
YP_006019781.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: shw:Sputw3181_1230 LysR family transcriptional regulator
YP_006019782.1	TIGRFAM: ATP-binding cassette protein, ChvD family; PFAM: ABC transporter-like; KEGG: shw:Sputw3181_1231 putative ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core
YP_006019783.1	KEGG: shw:Sputw3181_1232 serine hydroxymethyltransferase; PFAM: Serine hydroxymethyltransferase
YP_006019784.1	TIGRFAM: Ribonucleotide reductase regulator NrdR-like; HAMAP: Transcriptional repressor nrdR; KEGG: shw:Sputw3181_1233 transcriptional regulator NrdR; PFAM: ATP-cone
YP_006019785.1	TIGRFAM: Riboflavin biosynthesis protein RibD; Riboflavin-specific deaminase, C-terminal; KEGG: spc:Sputcn32_2778 riboflavin biosynthesis protein RibD; PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; CMP/dCMP deaminase, zinc-binding
YP_006019786.1	TIGRFAM: Lumazine-binding protein; KEGG: spc:Sputcn32_2777 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein
YP_006019787.1	TIGRFAM: DHBP synthase RibB; HAMAP: 3,4-dihydroxy-2-butanone 4-phosphate synthase; KEGG: shm:Shewmr7_1164 GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: DHBP synthase RibB; GTP cyclohydrolase II
YP_006019788.1	TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; HAMAP: 6,7-dimethyl-8-ribityllumazine synthase; KEGG: shw:Sputw3181_1237 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 6,7-dimethyl-8-ribityllumazine synthase
YP_006019789.1	TIGRFAM: NusB antitermination factor; HAMAP: N utilization substance protein B-like protein; KEGG: spc:Sputcn32_2774 transcription antitermination protein NusB; PFAM: NusB/RsmB/TIM44
YP_006019790.1	TIGRFAM: Thiamine-monophosphate kinase; KEGG: shw:Sputw3181_1239 thiamine-monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein, C-terminal
YP_006019791.1	KEGG: spc:Sputcn32_2772 phosphatidylglycerophosphatase; PFAM: Phosphatidylglycerophosphatase A
YP_006019792.1	KEGG: spc:Sputcn32_2771 recombination and repair protein; TIGRFAM: DNA recombination/repair protein RecN; PFAM: RecF/RecN/SMC protein, N-terminal
YP_006019793.1	PFAM: Auxin efflux carrier; KEGG: shw:Sputw3181_1242 auxin efflux carrier
YP_006019794.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: shw:Sputw3181_1243 LysR family transcriptional regulator
YP_006019795.1	KEGG: son:SO_3459 hypothetical protein
YP_006019796.1	PFAM: Protein of unknown function DUF416; KEGG: shw:Sputw3181_1244 hypothetical protein
YP_006019797.1	KEGG: shw:Sputw3181_1245 hybrid sensory histidine kinase BarA; PFAM: Protein of unknown function DUF2222; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; ATP-binding region, ATPase-like; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, phosphotransfer (Hpt) region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, phosphotransfer (Hpt) region
YP_006019798.1	TIGRFAM: 23S rRNA methyltransferase/RumA; HAMAP: 23S rRNA (uracil-5-)-methyltransferase rumA; KEGG: shw:Sputw3181_1246 23S rRNA 5-methyluridine methyltransferase; PFAM: Deoxyribonuclease/rho motif-related TRAM; Methyltransferase type 11
YP_006019799.1	TIGRFAM: RelA/SpoT protein; KEGG: shw:Sputw3181_1247 (p)ppGpp synthetase I, SpoT/RelA; PFAM: RelA/SpoT; TGS; Amino acid-binding ACT
YP_006019800.1	KEGG: sdn:Sden_2463 hypothetical protein
YP_006019801.1	KEGG: shw:Sputw3181_1248 hypothetical protein
YP_006019802.1	PFAM: Protein of unknown function DUF1852; KEGG: shw:Sputw3181_1249 hypothetical protein
YP_006019803.1	KEGG: shw:Sputw3181_1250 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; PFAM: Methionine synthase, vitamin-B12 independent
YP_006019804.1	PFAM: Amidase; KEGG: shm:Shewmr7_0660 amidase
YP_006019805.1	PFAM: Peptidyl-arginine deiminase, Porphyromonas-type; TIGRFAM: Agmatine deiminase; HAMAP: Agmatine deiminase; KEGG: shw:Sputw3181_1252 agmatine deiminase
YP_006019806.1	KEGG: shw:Sputw3181_1253 nucleoside triphosphate pyrophosphohydrolase; TIGRFAM: NTP pyrophosphohydrolase MazG, bacterial; PFAM: NTP pyrophosphohydrolase MazG, putative catalytic core
YP_006019807.1	PFAM: CTP synthase, N-terminal; Glutamine amidotransferase class-I, C-terminal; TIGRFAM: CTP synthase; HAMAP: CTP synthase; KEGG: shw:Sputw3181_1254 CTP synthetase
YP_006019808.1	PFAM: Enolase, C-terminal; Enolase, N-terminal; TIGRFAM: Enolase; HAMAP: Enolase; KEGG: shw:Sputw3181_1255 phosphopyruvate hydratase
YP_006019809.1	KEGG: spc:Sputcn32_2756 septum formation initiator; HAMAP: Cell division protein ftsB-like protein; PFAM: Septum formation initiator
YP_006019810.1	PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; HAMAP: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; KEGG: shw:Sputw3181_1257 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
YP_006019811.1	TIGRFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; HAMAP: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; KEGG: shn:Shewana3_1119 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core
YP_006019812.1	TIGRFAM: Pseudouridine synthase, TruD; HAMAP: tRNA pseudouridine synthase D; KEGG: shw:Sputw3181_1259 pseudouridylate synthase; PFAM: Pseudouridine synthase, TruD
YP_006019813.1	PFAM: Survival protein SurE-like phosphatase/nucleotidase; TIGRFAM: Survival protein SurE-like phosphatase/nucleotidase; HAMAP: Multifunctional protein surE; KEGG: shw:Sputw3181_1260 stationary phase survival protein SurE
YP_006019814.1	PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; TIGRFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; HAMAP: Protein-L-isoaspartate O-methyltransferase; KEGG: shw:Sputw3181_1261 protein-L-isoaspartate O-methyltransferase
YP_006019815.1	KEGG: shn:Shewana3_1123 peptidase M23B; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup
YP_006019816.1	KEGG: shn:Shewana3_1124 RNA polymerase, sigma 38 subunit, RpoS; TIGRFAM: RNA polymerase sigma factor RpoS, proteobacteria; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 3; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 1.2; RNA polymerase sigma-70 region 4
YP_006019817.1	SMART: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS, core; TIGRFAM: DNA mismatch repair protein MutS, type 1; KEGG: shw:Sputw3181_1264 DNA mismatch repair protein MutS; HAMAP: DNA mismatch repair protein MutS, type 1; PFAM: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS, core; DNA mismatch repair protein MutS-like, N-terminal; DNA mismatch repair protein MutS, connector; DNA mismatch repair protein MutS, clamp
YP_006019818.1	TIGRFAM: DNA recombination and repair protein RecA; PFAM: DNA recombination and repair protein RecA; KEGG: shw:Sputw3181_1265 recombinase A; SMART: ATPase, AAA+ type, core
YP_006019819.1	PFAM: Regulatory protein RecX; KEGG: shw:Sputw3181_1266 regulatory protein RecX
YP_006019820.1	KEGG: shw:Sputw3181_1267 alanyl-tRNA synthetase; TIGRFAM: Alanyl-tRNA synthetase, class IIc; PFAM: Alanyl-tRNA synthetase, class IIc, N-terminal; Threonyl/alanyl tRNA synthetase, SAD; Phosphoesterase, DHHA1
YP_006019821.1	KEGG: son:SO_3427 aspartokinase; TIGRFAM: Aspartate kinase region; PFAM: Aspartate/glutamate/uridylate kinase
YP_006019822.1	TIGRFAM: Carbon storage regulator; HAMAP: Carbon storage regulator; KEGG: shl:Shal_1234 carbon storage regulator; PFAM: Carbon storage regulator
YP_006019823.1	TIGRFAM: Valyl-tRNA synthetase, class Ia; HAMAP: Valyl-tRNA synthetase; KEGG: shw:Sputw3181_1270 valyl-tRNA synthetase
YP_006019824.1	PFAM: DNA polymerase III chi subunit, HolC; KEGG: shw:Sputw3181_1271 DNA polymerase III chi subunit, HolC
YP_006019825.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate cyclase, predicted; PAS fold-3; KEGG: sdn:Sden_1829 GGDEF domain-containing protein; SMART: Diguanylate cyclase, predicted; PAS
YP_006019826.1	KEGG: shn:Shewana3_3006 leucyl aminopeptidase; PFAM: Peptidase M17, leucyl aminopeptidase, C-terminal; Peptidase M17, leucyl aminopeptidase, N-terminal
YP_006019827.1	PFAM: Permease YjgP/YjgQ, predicted; KEGG: shn:Shewana3_3005 permease YjgP/YjgQ family protein
YP_006019828.1	PFAM: Permease YjgP/YjgQ, predicted; KEGG: shw:Sputw3181_2984 permease YjgP/YjgQ family protein
YP_006019829.1	PFAM: RDD; KEGG: shn:Shewana3_3003 RDD domain-containing protein
YP_006019830.1	KEGG: spc:Sputcn32_1182 hypothetical protein
YP_006019831.1	PFAM: Protein of unknown function DUF486; KEGG: shw:Sputw3181_2981 hypothetical protein
YP_006019832.1	PFAM: GCN5-related N-acetyltransferase; KEGG: shw:Sputw3181_2980 GCN5-related N-acetyltransferase
YP_006019833.1	KEGG: shm:Shewmr7_2902 carboxypeptidase Taq; PFAM: Peptidase M32, carboxypeptidase Taq metallopeptidase
YP_006019834.1	KEGG: she:Shewmr4_2818 hypothetical protein
YP_006019835.1	PFAM: Protein of unknown function DUF1449; KEGG: shw:Sputw3181_2979 hypothetical protein
YP_006019836.1	KEGG: shw:Sputw3181_2978 band 7 protein; PFAM: Band 7 protein; SMART: Band 7 protein
YP_006019837.1	TIGRFAM: Decahaem cytochrome, c-type, OmcA/MtrC; KEGG: shw:Sputw3181_2977 hypothetical protein
YP_006019838.1	PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: shw:Sputw3181_2976 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_006019839.1	PFAM: Aldehyde ferredoxin oxidoreductase, N-terminal; Aldehyde ferredoxin oxidoreductase, C-terminal; KEGG: shw:Sputw3181_2975 putative oxidoreductase; SMART: Aldehyde ferredoxin oxidoreductase, N-terminal
YP_006019840.1	KEGG: shw:Sputw3181_2974 hypothetical protein
YP_006019841.1	PFAM: Extracellular solute-binding protein, family 3; KEGG: shm:Shewmr7_2896 hypothetical protein
YP_006019842.1	KEGG: shw:Sputw3181_2971 hypothetical protein
YP_006019843.1	PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: shn:Shewana3_2991 redoxin domain-containing protein
YP_006019844.1	KEGG: sdn:Sden_3555 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02450, tryptophan-rich; PFAM: Conserved hypothetical protein CHP02450, tryptophan-rich
YP_006019845.1	PFAM: Homocysteine S-methyltransferase; KEGG: asa:ASA_1525 homocysteine S-methyltransferase
YP_006019846.1	PFAM: Amino acid permease-associated region; KEGG: spc:Sputcn32_3864 amino acid permease-associated region
YP_006019847.1	KEGG: spc:Sputcn32_1195 DEAD/DEAH box helicase domain-containing protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal
YP_006019848.1	TIGRFAM: PAS; PFAM: Chemotaxis methyl-accepting receptor, signalling; PAS fold-3; KEGG: shw:Sputw3181_2968 methyl-accepting chemotaxis sensory transducer; SMART: Chemotaxis methyl-accepting receptor, signalling
YP_006019849.1	KEGG: son:SO_1387 HD domain-containing protein; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region
YP_006019850.1	PFAM: Peptidase M24, structural domain; Creatinase; KEGG: shn:Shewana3_2986 peptidase M24
YP_006019851.1	PFAM: ROK; KEGG: son:SO_1389 ROK family protein
YP_006019852.1	KEGG: sdn:Sden_2136 chitinase; PFAM: Glycoside hydrolase, family 18, catalytic domain; Chitinase A N-terminal; PKD; Carbohydrate-binding domain, family 5/12; SMART: Chitinase II; PKD; Carbohydrate-binding domain, family 5/12
YP_006019853.1	PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal; KEGG: shw:Sputw3181_2964 peptidylprolyl isomerase, FKBP-type
YP_006019854.1	PFAM: Short chain fatty acid transporter; KEGG: shw:Sputw3181_2963 short chain fatty acid transporter
YP_006019855.1	PFAM: HPP; KEGG: son:SO_1392 hypothetical protein
YP_006019856.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: son:SO_1393 TetR family transcriptional regulator
YP_006019857.1	PFAM: Protein of unknown function DUF1294; KEGG: son:SO_1395 membrane protein,putative
YP_006019858.1	KEGG: shw:Sputw3181_2961 hypothetical protein
YP_006019859.1	KEGG: spc:Sputcn32_1204 cytosine deaminase; PFAM: CMP/dCMP deaminase, zinc-binding
YP_006019860.1	KEGG: shn:Shewana3_2976 hypothetical protein
YP_006019861.1	PFAM: Protein of unknown function DUF368; KEGG: shw:Sputw3181_2958 hypothetical protein
YP_006019862.1	PFAM: YheO-like; KEGG: shn:Shewana3_2973 YheO domain-containing protein
YP_006019863.1	HAMAP: Uncharacterised protein family UPF0597; KEGG: shw:Sputw3181_2955 hypothetical protein
YP_006019864.1	KEGG: shn:Shewana3_2971 putative endoribonuclease L-PSP; TIGRFAM: YjgF-like protein; PFAM: Endoribonuclease L-PSP
YP_006019865.1	KEGG: she:Shewmr4_2791 HAAAP family transport protein
YP_006019866.1	KEGG: saz:Sama_0622 putative methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_006019867.1	KEGG: saz:Sama_0621 hypothetical protein
YP_006019868.1	KEGG: sdn:Sden_0607 hypothetical protein
YP_006019869.1	KEGG: shm:Shewmr7_2873 twin-arginine translocation pathway signal; PFAM: Transglutaminase-like; SMART: Transglutaminase-like
YP_006019870.1	KEGG: shm:Shewmr7_2872 mercuric transport protein MerT, putative
YP_006019871.1	PFAM: Heavy metal transport/detoxification protein; KEGG: son:SO_1407 mercuric transport periplasmic protein MerP, putative
YP_006019872.1	KEGG: she:Shewmr4_1162 hypothetical protein
YP_006019873.1	PFAM: Protein of unknown function DUF523; Protein of unknown function DUF1722; KEGG: shw:Sputw3181_1296 hypothetical protein
YP_006019874.1	KEGG: shw:Sputw3181_1297 MerR family transcriptional regulator; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR
YP_006019875.1	KEGG: spc:Sputcn32_2714 deoxyribodipyrimidine photo-lyase; PFAM: DNA photolyase, FAD-binding/Cryptochrome, C-terminal; DNA photolyase, N-terminal
YP_006019876.1	KEGG: shw:Sputw3181_1299 transcriptional regulator-related protein
YP_006019877.1	PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: spc:Sputcn32_2712 short-chain dehydrogenase/reductase SDR
YP_006019878.1	PFAM: Amine oxidase; KEGG: shw:Sputw3181_1301 amine oxidase
YP_006019879.1	PFAM: Protein of unknown function DUF1365; KEGG: shw:Sputw3181_1302 hypothetical protein
YP_006019880.1	KEGG: spc:Sputcn32_2709 cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase
YP_006019881.1	KEGG: shw:Sputw3181_1304 hypothetical protein
YP_006019882.1	KEGG: shw:Sputw3181_1305 hypothetical protein
YP_006019883.1	KEGG: shw:Sputw3181_1306 hypothetical protein
YP_006019884.1	KEGG: shn:Shewana3_1175 hypothetical protein
YP_006019885.1	KEGG: spc:Sputcn32_2705 hypothetical protein
YP_006019886.1	KEGG: shn:Shewana3_1177 hypothetical protein
YP_006019887.1	KEGG: shw:Sputw3181_1308 cytochrome b561
YP_006019888.1	KEGG: spc:Sputcn32_2702 hypothetical protein; HAMAP: Protein yceI; PFAM: Lipid/polyisoprenoid-binding, YceI-like
YP_006019889.1	KEGG: spc:Sputcn32_2701 hypothetical protein; HAMAP: Fe(II) trafficking protein YggX; PFAM: Fe(II) trafficking protein YggX
YP_006019890.1	TIGRFAM: A/G-specific adenine glycosylase MutY, bacterial form; PFAM: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif; KEGG: shw:Sputw3181_1311 A/G-specific adenine glycosylase; SMART: HhH-GPD domain
YP_006019891.1	TIGRFAM: tRNA (guanine-N-7) methyltransferase; HAMAP: tRNA (guanine-N(7)-)-methyltransferase; KEGG: spc:Sputcn32_2699 tRNA (guanine-N(7)-)-methyltransferase; PFAM: tRNA (guanine-N-7) methyltransferase
YP_006019892.1	PFAM: Protein of unknown function DUF469; KEGG: shw:Sputw3181_1313 hypothetical protein
YP_006019893.1	PFAM: Glutaminase, core; TIGRFAM: glutaminase A; HAMAP: Glutaminase, core; KEGG: shw:Sputw3181_1314 glutaminase
YP_006019894.1	KEGG: shn:Shewana3_1185 hypothetical protein
YP_006019895.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: shw:Sputw3181_1316 LysR family transcriptional regulator
YP_006019896.1	PFAM: Protein of unknown function DUF885, bacterial; KEGG: she:Shewmr4_1186 hypothetical protein
YP_006019897.1	TIGRFAM: Putative oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN, C-terminal; Radical SAM; KEGG: shm:Shewmr7_1258 putative oxygen-independent coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB
YP_006019898.1	PFAM: Ham1-like protein; TIGRFAM: Ham1-like protein; HAMAP: Nucleoside-triphosphatase rdgB; KEGG: she:Shewmr4_1188 putative deoxyribonucleotide triphosphate pyrophosphatase
YP_006019899.1	KEGG: shm:Shewmr7_1260 hypothetical protein
YP_006019900.1	TIGRFAM: Conserved hypothetical protein CHP00251; HAMAP: Protein of unknown function DUF167; KEGG: shw:Sputw3181_1321 hypothetical protein; PFAM: Protein of unknown function DUF167
YP_006019901.1	PFAM: Protein of unknown function YGGT; KEGG: shw:Sputw3181_1322 protein of unknown function YGGT
YP_006019902.1	TIGRFAM: Delta 1-pyrroline-5-carboxylate reductase; KEGG: shw:Sputw3181_1323 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent
YP_006019903.1	KEGG: shw:Sputw3181_1324 alanine racemase domain-containing protein; TIGRFAM: pyridoxal phosphate-dependent enzyme, YBL036C type; PFAM: Alanine racemase, N-terminal
YP_006019904.1	KEGG: son:SO_3351 twitching motility protein PilT; TIGRFAM: Pilus retraction protein PilT; PFAM: Type II secretion system protein E
YP_006019905.1	TIGRFAM: Pilus retraction protein PilT; PFAM: Type II secretion system protein E; KEGG: shw:Sputw3181_1326 twitching motility protein; SMART: ATPase, AAA+ type, core
YP_006019906.1	PFAM: Glutathione peroxidase; KEGG: shw:Sputw3181_1327 glutathione peroxidase
YP_006019907.1	PFAM: Ferrochelatase; TIGRFAM: Ferrochelatase; HAMAP: Ferrochelatase; KEGG: spc:Sputcn32_2683 ferrochelatase
YP_006019908.1	SMART: Resolvase, RNase H-like fold; TIGRFAM: Resolvase, holliday junction-type, YqgF-like; KEGG: spc:Sputcn32_2682 Holliday junction resolvase-like protein; HAMAP: Holliday junction resolvase; PFAM: Resolvase, holliday junction-type, YqgF-like
YP_006019909.1	KEGG: shw:Sputw3181_1330 hypothetical protein; HAMAP: Protein of unknown function DUF179; PFAM: Protein of unknown function DUF179
YP_006019910.1	PFAM: Translation initiation factor SUI1; KEGG: shw:Sputw3181_1331 translation initiation factor SUI1
YP_006019911.1	KEGG: shw:Sputw3181_1332 hypothetical protein
YP_006019912.1	KEGG: son:SO_3343 hypothetical protein
YP_006019913.1	PFAM: Uncharacterised protein family UPF0126; KEGG: shw:Sputw3181_1334 hypothetical protein
YP_006019914.1	PFAM: Redoxin; KEGG: shm:Shewmr7_1275 thiol peroxidase (atypical 2-Cys peroxiredoxin)
YP_006019915.1	PFAM: Mechanosensitive ion channel MscS; KEGG: shn:Shewana3_1206 MscS mechanosensitive ion channel
YP_006019916.1	PFAM: Outer membrane protein, OmpA/MotB, C-terminal; Thrombospondin, type 3-like repeat; KEGG: shw:Sputw3181_1337 OmpA/MotB domain-containing protein
YP_006019917.1	KEGG: spc:Sputcn32_2673 threonine aldolase; PFAM: Aromatic amino acid beta-eliminating lyase/threonine aldolase
YP_006019918.1	PFAM: Metal-dependent hydrolase HDOD; GAF; KEGG: she:Shewmr4_1208 putative signal transduction protein
YP_006019919.1	KEGG: shm:Shewmr7_1280 hypothetical protein
YP_006019920.1	PFAM: Protein of unknown function DUF980; KEGG: spc:Sputcn32_2672 hypothetical protein
YP_006019921.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: shw:Sputw3181_1340 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_006019922.1	PFAM: Bacterial extracellular solute-binding, family 1; KEGG: she:Shewmr4_1212 extracellular solute-binding protein
YP_006019923.1	KEGG: she:Shewmr4_1213 CopG family transcriptional regulator
YP_006019924.1	KEGG: she:Shewmr4_1214 hypothetical protein
YP_006019925.1	PFAM: GCN5-related N-acetyltransferase; KEGG: shw:Sputw3181_1342 GCN5-related N-acetyltransferase
YP_006019926.1	KEGG: shw:Sputw3181_1343 hypothetical protein
YP_006019927.1	KEGG: shw:Sputw3181_1344 NrfJ-related protein
YP_006019928.1	PFAM: GCN5-related N-acetyltransferase; KEGG: spc:Sputcn32_2666 GCN5-related N-acetyltransferase
YP_006019929.1	PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO_3323 acetyltransferase
YP_006019930.1	PFAM: Pirin, N-terminal; KEGG: shw:Sputw3181_1347 pirin domain-containing protein
YP_006019931.1	PFAM: DoxX; KEGG: shw:Sputw3181_1348 DoxX family protein
YP_006019932.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: shn:Shewana3_1223 LysR family transcriptional regulator
YP_006019933.1	KEGG: shw:Sputw3181_1350 5'-nucleotidase domain-containing protein; PFAM: Metallophosphoesterase; 5'-Nucleotidase, C-terminal
YP_006019934.1	PFAM: Protein of unknown function DUF21; Cystathionine beta-synthase, core; KEGG: shn:Shewana3_1225 hypothetical protein
YP_006019935.1	TIGRFAM: Ribosomal RNA large subunit methyltransferase RlmN; HAMAP: Ribosomal RNA large subunit methyltransferase RlmN; KEGG: shw:Sputw3181_1352 ribosomal RNA large subunit methyltransferase N; PFAM: Radical SAM
YP_006019936.1	TIGRFAM: Pilus biogenesis/stability type IV, PilW; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; KEGG: shw:Sputw3181_1353 type IV pilus biogenesis/stability protein PilW; SMART: Tetratricopeptide repeat
YP_006019937.1	KEGG: shw:Sputw3181_1354 hypothetical protein
YP_006019938.1	TIGRFAM: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type; HAMAP: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type; KEGG: shw:Sputw3181_1355 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; PFAM: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type
YP_006019939.1	PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Anticodon-binding; TIGRFAM: Histidyl-tRNA synthetase, class IIa, subgroup; HAMAP: Histidyl-tRNA synthetase, class IIa, subgroup; KEGG: shw:Sputw3181_1356 histidyl-tRNA synthetase
YP_006019940.1	PFAM: Protein of unknown function DUF2133; KEGG: spc:Sputcn32_2650 hypothetical protein
YP_006019941.1	TIGRFAM: Outer membrane assembly lipoprotein YfgL; PFAM: Pyrrolo-quinoline quinone repeat; KEGG: shn:Shewana3_1232 outer membrane protein assembly complex subunit YfgL; SMART: Pyrrolo-quinoline quinone beta-propeller repeat
YP_006019942.1	TIGRFAM: GTP-binding, EngA; Small GTP-binding protein; HAMAP: GTP-binding, EngA; KEGG: spc:Sputcn32_2648 GTP-binding protein EngA; PFAM: GTP-binding protein, HSR1-related
YP_006019943.1	TIGRFAM: Exonuclease VII, large subunit; HAMAP: Exodeoxyribonuclease 7 large subunit; KEGG: shw:Sputw3181_1360 exodeoxyribonuclease VII large subunit; PFAM: Exonuclease VII, large subunit, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type
YP_006019944.1	SMART: Cystathionine beta-synthase, core; TIGRFAM: IMP dehydrogenase; KEGG: son:SO_3293 inosine 5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; Cystathionine beta-synthase, core
YP_006019945.1	PFAM: GMP synthase, C-terminal; Glutamine amidotransferase class-I, C-terminal; tRNA methyl transferase-like; TIGRFAM: GMP synthase, C-terminal; GMP synthase, N-terminal; HAMAP: GMP synthase [glutamine-hydrolyzing]; KEGG: shw:Sputw3181_1362 GMP synthase
YP_006019946.1	PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: shw:Sputw3181_1363 CMP/dCMP deaminase, zinc-binding
YP_006019947.1	HAMAP: Membrane-bound lytic murein transglycosylase F; PFAM: Extracellular solute-binding protein, family 3; Lytic transglycosylase-like, catalytic; KEGG: she:Shewmr4_1237 putative transglycosylase; SMART: Extracellular solute-binding protein, family 3
YP_006019948.1	PFAM: AIR synthase related protein, C-terminal; AIR synthase related protein; TIGRFAM: Phosphoribosylformylglycinamidine synthase, eukaryote/proteobacteria; HAMAP: Phosphoribosylformylglycinamidine synthase; KEGG: shw:Sputw3181_1365 phosphoribosylformylglycinamidine synthase
YP_006019949.1	PFAM: Integrase, catalytic core; KEGG: shm:Shewmr7_3980 integrase catalytic subunit
YP_006019950.1	KEGG: shm:Shewmr7_3734 transposase
YP_006019951.1	PFAM: Cytochrome bd ubiquinol oxidase, subunit I; KEGG: shw:Sputw3181_1366 cytochrome bd ubiquinol oxidase, subunit I
YP_006019952.1	KEGG: shw:Sputw3181_1367 cytochrome d ubiquinol oxidase, subunit II; TIGRFAM: Cytochrome bd ubiquinol oxidase, subunit II; PFAM: Cytochrome bd ubiquinol oxidase, subunit II
YP_006019953.1	KEGG: shw:Sputw3181_1368 cyd operon protein YbgT; TIGRFAM: Cyd operon protein YbgT; PFAM: Membrane bound YbgT-like
YP_006019954.1	KEGG: shn:Shewana3_1293 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_006019955.1	PFAM: Protein of unknown function DUF465; KEGG: son:SO_3280 hypothetical protein
YP_006019956.1	PFAM: Acriflavin resistance protein; KEGG: shn:Shewana3_1295 acriflavin resistance protein
YP_006019957.1	KEGG: spc:Sputcn32_2635 RND family efflux transporter MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_006019958.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: shw:Sputw3181_1373 TetR family transcriptional regulator
YP_006019959.1	KEGG: spc:Sputcn32_2633 hypothetical protein
YP_006019960.1	KEGG: shn:Shewana3_1299 hypothetical protein
YP_006019961.1	KEGG: shm:Shewmr7_1320 hypothetical protein
YP_006019962.1	PFAM: Protein of unknown function DUF115; KEGG: son:SO_3273 hypothetical protein
YP_006019963.1	KEGG: son:SO_3271 polysaccharide biosynthesis protein; TIGRFAM: Pseudaminic acid biosynthesis, PseB; PFAM: Polysaccharide biosynthesis protein CapD-like
YP_006019964.1	KEGG: son:SO_3270 polysaccharide biosynthesis protein; TIGRFAM: Pseudaminic acid biosynthesis, PseC; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase
YP_006019965.1	PFAM: Acylneuraminate cytidylyltransferase; KEGG: son:SO_3269 cytidyltransferase-like protein
YP_006019966.1	PFAM: Glycoside hydrolase, family 57, core; KEGG: son:SO_3268 alpha amylase domain-containing protein
YP_006019967.1	PFAM: Methyltransferase type 12; KEGG: son:SO_3267 hypothetical protein
YP_006019968.1	PFAM: Methyltransferase type 11; KEGG: son:SO_3266 hypothetical protein
YP_006019969.1	KEGG: shl:Shal_1400 transketolase central region; PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal
YP_006019970.1	KEGG: shl:Shal_1401 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR
YP_006019971.1	PFAM: ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type; KEGG: shl:Shal_1402 hypothetical protein
YP_006019972.1	PFAM: N-acetylneuraminic acid synthase, N-terminal; KEGG: son:SO_3261 polysaccharide biosynthesis related-protein
YP_006019973.1	KEGG: son:SO_3260 hypothetical protein
YP_006019974.1	PFAM: Protein of unknown function DUF115; KEGG: son:SO_3259 hypothetical protein
YP_006019975.1	PFAM: Integrase, catalytic core, phage; KEGG: spc:Sputcn32_2612 phage integrase family protein
YP_006019976.1	PFAM: DNA methylase, adenine-specific; KEGG: nde:NIDE0139 type I restriction endonuclease, M subunit
YP_006019977.1	PFAM: Restriction endonuclease, type I, S subunit, EcoBI; KEGG: cur:cur_0268 type I restriction-modification system, specificity subunit
YP_006019978.1	KEGG: nde:NIDE0136 putative type I restriction endonuclease, R subunit; PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; Restriction endonuclease, type I, EcoEI, R subunit/Type III, Res subunit, C-terminal; SMART: DEAD-like helicase, N-terminal
YP_006019979.1	PFAM: Replication endonuclease, probable, phage; KEGG: spc:Sputcn32_2609 bacteriophage replication gene A
YP_006019980.1	KEGG: spc:Sputcn32_2608 hypothetical protein
YP_006019981.1	KEGG: spc:Sputcn32_2607 hypothetical protein
YP_006019982.1	KEGG: hypothetical protein
YP_006019983.1	KEGG: spc:Sputcn32_2606 hypothetical protein
YP_006019984.1	KEGG: shw:Sputw3181_1398 hypothetical protein
YP_006019985.1	KEGG: spc:Sputcn32_2604 hypothetical protein
YP_006019986.1	PFAM: Protein of unknown function DUF400; KEGG: son:SO_3256 hypothetical protein
YP_006019987.1	PFAM: FlgN; KEGG: shw:Sputw3181_1401 FlgN family protein
YP_006019988.1	KEGG: shw:Sputw3181_1402 anti-sigma-28 factor, FlgM; TIGRFAM: flagellar biosynthesis anti-sigma factor protein FlgM; PFAM: Anti-sigma-28 factor, FlgM
YP_006019989.1	KEGG: shw:Sputw3181_1403 flagellar basal body P-ring biosynthesis protein FlgA; TIGRFAM: Flagella basal body P-ring formation protein FlgA; PFAM: SAF domain
YP_006019990.1	KEGG: son:SO_3252 chemotaxis protein CheV; PFAM: CheW-like protein; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; CheW-like protein
YP_006019991.1	PFAM: MCP methyltransferase, CheR-type; KEGG: spc:Sputcn32_2598 protein-glutamate O-methyltransferase; SMART: MCP methyltransferase, CheR-type
YP_006019992.1	KEGG: shw:Sputw3181_1406 flagellar basal body rod protein FlgB; TIGRFAM: Flagellar basal-body rod protein FlgB; PFAM: Flagellar basal body rod protein, N-terminal
YP_006019993.1	KEGG: shm:Shewmr7_1330 flagellar basal body rod protein FlgC; TIGRFAM: Flagellar basal-body rod protein FlgC; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal
YP_006019994.1	PFAM: Flagellar hook capping protein; KEGG: shm:Shewmr7_1331 flagellar basal body rod modification protein
YP_006019995.1	KEGG: she:Shewmr4_1262 flagellar hook protein FlgE; TIGRFAM: Fagellar hook-basal body protein, FlgE/F/G; PFAM: Flagellar basal body FlaE; Flagellar basal body rod protein, N-terminal; Protein of unknown function DUF1078, C-terminal
YP_006019996.1	KEGG: shn:Shewana3_1325 flagellar basal body rod protein FlgF; TIGRFAM: Flagellar basal-body rod FlgF; Fagellar hook-basal body protein, FlgE/F/G; PFAM: Flagellar basal body rod protein, N-terminal; Protein of unknown function DUF1078, C-terminal
YP_006019997.1	KEGG: she:Shewmr4_1264 flagellar basal body rod protein FlgG; TIGRFAM: Flagellar basal-body rod FlgG; Fagellar hook-basal body protein, FlgE/F/G; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal
YP_006019998.1	KEGG: shm:Shewmr7_1335 flagellar basal body L-ring protein; HAMAP: Flagellar L-ring protein; PFAM: Flagellar L-ring protein
YP_006019999.1	KEGG: she:Shewmr4_1266 flagellar basal body P-ring protein; HAMAP: Flagellar P-ring protein; PFAM: Flagellar P-ring protein
YP_006020000.1	KEGG: shm:Shewmr7_1337 flagellar rod assembly protein/muramidase FlgJ; TIGRFAM: Flagellar protein FlgJ type-2; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; Flagellar protein FlgJ, N-terminal
YP_006020001.1	KEGG: shw:Sputw3181_1415 flagellar hook-associated protein FlgK; TIGRFAM: Flagellar hook-associated protein, FlgK; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal
YP_006020002.1	KEGG: spc:Sputcn32_2587 flagellar hook-associated protein FlgL; TIGRFAM: Flagellar hook-associated protein 3; PFAM: Flagellin, N-terminal
YP_006020003.1	PFAM: Flagellin, N-terminal; Flagellin, C-terminal; KEGG: shl:Shal_1438 flagellin domain-containing protein
YP_006020004.1	PFAM: Flagellin, N-terminal; Flagellin, C-terminal; KEGG: slo:Shew_1357 flagellin domain-containing protein
YP_006020005.1	PFAM: Flagellar protein FlaG protein; KEGG: shn:Shewana3_1334 flagellar protein FlaG protein
YP_006020006.1	PFAM: Flagellar hook-associated 2, C-terminal; Flagellar hook-associated protein 2, N-terminal; Flagellin hook, IN motif; KEGG: shw:Sputw3181_1420 flagellar hook-associated 2 domain-containing protein
YP_006020007.1	KEGG: shw:Sputw3181_1421 hypothetical protein
YP_006020008.1	KEGG: shw:Sputw3181_1422 flagellar protein FliS; TIGRFAM: Flagellar protein FliS; PFAM: Flagellar protein FliS
YP_006020009.1	KEGG: shn:Shewana3_1338 sigma-54 dependent trancsriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; Flagellar regulatory FleQ; SMART: ATPase, AAA+ type, core
YP_006020010.1	KEGG: shw:Sputw3181_1424 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS
YP_006020011.1	KEGG: shm:Shewmr7_1347 two component, sigma54 specific, fis family transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core
YP_006020012.1	TIGRFAM: Flagellar hook-basal body complex protein FliE; HAMAP: Flagellar hook-basal body complex protein FliE; KEGG: shw:Sputw3181_1426 flagellar hook-basal body complex subunit FliE; PFAM: Flagellar hook-basal body complex protein FliE
YP_006020013.1	KEGG: shn:Shewana3_1342 flagellar MS-ring protein; TIGRFAM: Flagellar FliF M-ring protein; PFAM: Flagellar M-ring C-terminal; Secretory protein YscJ/FliF
YP_006020014.1	KEGG: shm:Shewmr7_1350 flagellar motor switch protein G; TIGRFAM: Flagellar motor switch protein FliG; PFAM: Flagellar motor switch protein FliG; Magnesium transporter, MgtE intracellular region
YP_006020015.1	PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE; KEGG: spc:Sputcn32_2574 flagellar assembly protein H
YP_006020016.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Flagellar protein export ATPase, FliI; ATPase, type III secretion system, FliI/YscN; KEGG: shn:Shewana3_1345 flagellum-specific ATP synthase; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain
YP_006020017.1	TIGRFAM: Flagellar export FliJ; KEGG: spc:Sputcn32_2572 flagellar export protein FliJ
YP_006020018.1	PFAM: Flagellar hook-length control protein; KEGG: shm:Shewmr7_1354 flagellar hook-length control protein
YP_006020019.1	PFAM: Flagellar basal body-associated protein FliL; KEGG: she:Shewmr4_1288 flagellar basal body-associated protein FliL
YP_006020020.1	KEGG: shw:Sputw3181_1434 flagellar motor switch protein FliM; TIGRFAM: Flagellar motor switch protein FliM; PFAM: Flagellar motor switch protein FliM; Surface presentation of antigen (SpoA)
YP_006020021.1	KEGG: shm:Shewmr7_1357 flagellar motor switch protein; TIGRFAM: Flagellar motor switch FliN; PFAM: Surface presentation of antigen (SpoA)
YP_006020022.1	KEGG: shw:Sputw3181_1436 flagellar biosynthesis protein, FliO; TIGRFAM: Flagellar biosynthesis protein, FliO; PFAM: Flagellar biosynthesis protein, FliO
YP_006020023.1	KEGG: shw:Sputw3181_1437 flagellar biosynthesis protein FliP; TIGRFAM: Flagellar transport protein FliP; PFAM: Type III secretion system inner membrane P protein
YP_006020024.1	KEGG: shw:Sputw3181_1438 flagellar biosynthetic protein FliQ; TIGRFAM: Flagellar biosynthesis protein FliQ; PFAM: Bacterial export protein FliQ, family 3
YP_006020025.1	KEGG: shw:Sputw3181_1439 flagellar biosynthesis protein FliR; TIGRFAM: Flagellar biosynthesis protein FliR; PFAM: Type III secretion system inner membrane R protein
YP_006020026.1	KEGG: spc:Sputcn32_2563 flagellar biosynthesis protein FlhB; TIGRFAM: Flagellar biosynthetic protein FlhB; PFAM: Type III secretion exporter
YP_006020027.1	KEGG: shw:Sputw3181_1441 flagellar biosynthesis protein FlhA; TIGRFAM: Flagellar biosynthesis protein FlhA; PFAM: Type III secretion system FHIPEP
YP_006020028.1	TIGRFAM: Signal-recognition particle (SRP)-type GTPase; PFAM: Signal recognition particle, SRP54 subunit, GTPase; KEGG: shw:Sputw3181_1442 flagellar biosynthesis regulator FlhF; SMART: ATPase, AAA+ type, core
YP_006020029.1	PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: spc:Sputcn32_2560 cobyrinic acid a,c-diamide synthase
YP_006020030.1	KEGG: spc:Sputcn32_2559 flagellar biosynthesis sigma factor; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 3; RNA polymerase sigma-70 region 4
YP_006020031.1	KEGG: shn:Shewana3_1360 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region
YP_006020032.1	PFAM: Chemotaxis phosphatase, CheZ; KEGG: shw:Sputw3181_1446 chemotaxis phosphatase, CheZ
YP_006020033.1	KEGG: she:Shewmr4_1302 CheA signal transduction histidine kinases; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup, homodimeric; Signal transduction histidine kinase, phosphotransfer (Hpt) region; CheW-like protein; SMART: CheW-like protein; ATP-binding region, ATPase-like; Signal transduction histidine kinase, phosphotransfer (Hpt) region
YP_006020034.1	HAMAP: Chemotaxis response regulator protein-glutamate methylesterase; PFAM: Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase; Signal transduction response regulator, receiver region; KEGG: spc:Sputcn32_2555 chemotaxis-specific methylesterase; SMART: Signal transduction response regulator, receiver region
YP_006020035.1	KEGG: shn:Shewana3_1364 hypothetical protein
YP_006020036.1	PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: shw:Sputw3181_1450 cobyrinic acid a,c-diamide synthase
YP_006020037.1	KEGG: she:Shewmr4_1306 CheW protein; PFAM: CheW-like protein; SMART: CheW-like protein
YP_006020038.1	KEGG: shw:Sputw3181_1452 putative CheW protein; PFAM: CheW-like protein; SMART: CheW-like protein
YP_006020039.1	KEGG: shn:Shewana3_1368 hypothetical protein
YP_006020040.1	PFAM: Type III secretion exporter; KEGG: shn:Shewana3_1369 FlhB domain-containing protein
YP_006020041.1	KEGG: shn:Shewana3_1370 hypothetical protein
YP_006020042.1	PFAM: VacJ-like lipoprotein; KEGG: shn:Shewana3_1371 VacJ family lipoprotein
YP_006020043.1	KEGG: shm:Shewmr7_1379 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region
YP_006020044.1	KEGG: spc:Sputcn32_2545 amino acid/peptide transporter; TIGRFAM: Amino acid/peptide transporter; PFAM: Oligopeptide transporter
YP_006020045.1	TIGRFAM: Transcription activator RfaH; PFAM: Transcription antitermination protein, NusG, N-terminal; KEGG: spc:Sputcn32_2544 NusG antitermination factor; SMART: Transcription antitermination protein, NusG, N-terminal
YP_006020046.1	PFAM: Polysaccharide export protein; Soluble ligand binding domain; KEGG: spc:Sputcn32_2543 polysaccharide export protein
YP_006020047.1	PFAM: Lipopolysaccharide biosynthesis; KEGG: son:SO_3191 chain length determinant protein
YP_006020048.1	TIGRFAM: dTDP-glucose 4,6-dehydratase; KEGG: shw:Sputw3181_1463 dTDP-glucose 4,6 dehydratase; PFAM: NAD-dependent epimerase/dehydratase
YP_006020049.1	TIGRFAM: Glucose-1-phosphate thymidylyltransferase, long form; KEGG: pmr:PMI3321 glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase
YP_006020050.1	TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related; KEGG: vfi:VF_0168 dTDP-4-deoxyrhamnose-3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related
YP_006020051.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: ent:Ent638_2650 NAD-dependent epimerase/dehydratase
YP_006020052.1	KEGG: ent:Ent638_2654 hexapaptide repeat-containing transferase
YP_006020053.1	KEGG: bpy:Bphyt_6269 putative acetyltransferase
YP_006020054.1	PFAM: Glycosyl transferase, family 2; KEGG: gur:Gura_3185 glycosyl transferase family protein
YP_006020055.1	KEGG: psm:PSM_A0453 capsular polysaccharide polymerase
YP_006020056.1	PFAM: Glycosyl transferase, group 1; KEGG: cac:CA_C2313 glycosyltransferase
YP_006020058.1	PFAM: Glycosyl transferase, group 1; KEGG: cpi:Cpin_1089 glycosyl transferase group 1
YP_006020059.1	PFAM: GHMP kinase; GHMP kinase, C-terminal; KEGG: plu:plu4822 WblW protein
YP_006020060.1	HAMAP: Phosphoheptose isomerase; KEGG: paa:Paes_1745 phosphoheptose isomerase
YP_006020061.1	PFAM: Nucleotidyl transferase; KEGG: paa:Paes_1744 nucleotidyl transferase
YP_006020062.1	KEGG: ppr:PBPRA2939 D,D-heptose 1,7-bisphosphate phosphatase; TIGRFAM: D,D-heptose 1,7-bisphosphate phosphatase; Histidinol-phosphate phosphatase; HAD-superfamily hydrolase, subfamily IIIA; PFAM: Haloacid dehalogenase-like hydrolase
YP_006020063.1	KEGG: shm:Shewmr7_1397 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase; TIGRFAM: Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase; PFAM: Glycosyl transferase, family 4, conserved region
YP_006020064.1	TIGRFAM: Phosphoglucosamine mutase; KEGG: shm:Shewmr7_1398 phosphoglucosamine mutase; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal
YP_006020065.1	PFAM: HutD; KEGG: son:SO_3164 hypothetical protein
YP_006020066.1	KEGG: shw:Sputw3181_1481 copper resistance lipoprotein NlpE
YP_006020067.1	KEGG: sdn:Sden_2546 metal-dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; Signal transduction response regulator, receiver region; SMART: Metal-dependent phosphohydrolase, HD region; Signal transduction response regulator, receiver region
YP_006020068.1	KEGG: son:SO_3162 sensor histidine kinase; PFAM: ATP-binding region, ATPase-like; GAF; SMART: ATP-binding region, ATPase-like; GAF
YP_006020069.1	TIGRFAM: Glucose-1-phosphate thymidylyltransferase, long form; KEGG: shm:Shewmr7_1403 glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase
YP_006020070.1	TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related; KEGG: she:Shewmr4_1339 dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related
YP_006020071.1	KEGG: psm:PSM_B0316 putative NADH-dependent flavin oxidoreductase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal
YP_006020072.1	PFAM: Protein of unknown function DUF940, bacterial membrane lipoprotein putative; KEGG: shw:Sputw3181_1485 protein of unknown function DUF940, membrane lipoprotein putative
YP_006020073.1	PFAM: Protein of unknown function DUF1017; KEGG: spc:Sputcn32_2522 hypothetical protein
YP_006020074.1	KEGG: spc:Sputcn32_2521 putative lipoprotein
YP_006020075.1	KEGG: spc:Sputcn32_2520 hypothetical protein
YP_006020076.1	PFAM: Patatin; KEGG: she:Shewmr4_1344 patatin
YP_006020077.1	PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: Ketopantoate hydroxymethyltransferase; HAMAP: Ketopantoate hydroxymethyltransferase; KEGG: hch:HCH_00810 3-methyl-2-oxobutanoate hydroxymethyltransferase
YP_006020078.1	KEGG: swd:Swoo_3997 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_006020079.1	TIGRFAM: Prolyl-tRNA synthetase, class IIa, bacterial; HAMAP: Prolyl-tRNA synthetase; KEGG: shw:Sputw3181_1490 prolyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; YbaK/aminoacyl-tRNA synthetase associated region; Anticodon-binding
YP_006020080.1	KEGG: shw:Sputw3181_1491 hexapaptide repeat-containing transferase
YP_006020081.1	KEGG: spc:Sputcn32_2516 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0066; PFAM: Uncharacterised protein family UPF0066
YP_006020082.1	KEGG: shw:Sputw3181_1493 putative lipoprotein
YP_006020083.1	PFAM: Amidohydrolase 3; KEGG: shw:Sputw3181_1494 hypothetical protein
YP_006020084.1	PFAM: Amidohydrolase 3; Amidohydrolase 1; KEGG: spc:Sputcn32_2513 amidohydrolase
YP_006020085.1	KEGG: shm:Shewmr7_1416 histone family protein nucleoid-structuring protein H-NS; PFAM: Histone-like nucleoid-structuring protein H-NS; SMART: Histone-like nucleoid-structuring protein H-NS
YP_006020086.1	PFAM: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; KEGG: shn:Shewana3_1405 electron transfer flavoprotein beta-subunit
YP_006020087.1	PFAM: Electron transfer flavoprotein, alpha subunit, C-terminal; Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; KEGG: shw:Sputw3181_1498 electron transfer flavoprotein, alpha subunit
YP_006020088.1	PFAM: Na+/H+ antiporter NhaC-like; KEGG: shm:Shewmr7_1419 Na+/H+ antiporter NhaC
YP_006020089.1	KEGG: spc:Sputcn32_2508 peptidyl-dipeptidase DCP; PFAM: Peptidase M3A/M3B, thimet/oligopeptidase F
YP_006020090.1	KEGG: shn:Shewana3_1409 hypothetical protein
YP_006020091.1	PFAM: Thymidine kinase; manually curated; KEGG: shw:Sputw3181_1502 thymidine kinase; HAMAP: Thymidine kinase, subgroup
YP_006020092.1	KEGG: shw:Sputw3181_1503 hypothetical protein
YP_006020094.1	KEGG: spc:Sputcn32_1707 glucose sorbosone dehydrogenase
YP_006020095.1	PFAM: Protein of unknown function DUF81; KEGG: spc:Sputcn32_1708 hypothetical protein
YP_006020096.1	KEGG: shw:Sputw3181_2316 hypothetical protein
YP_006020097.1	PFAM: ThiJ/PfpI; KEGG: spc:Sputcn32_1710 ThiJ/PfpI domain-containing protein
YP_006020099.1	TIGRFAM: 3-oxoacid CoA-transferase, subunit B; KEGG: shw:Sputw3181_2312 3-oxoacid CoA-transferase, B subunit; PFAM: Coenzyme A transferase
YP_006020100.1	TIGRFAM: 3-oxoacid CoA-transferase, subunit A; KEGG: spc:Sputcn32_1714 3-oxoacid CoA-transferase, A subunit; PFAM: Coenzyme A transferase
YP_006020101.1	KEGG: shn:Shewana3_1668 hydroxymethylglutaryl-CoA lyase; PFAM: Pyruvate carboxyltransferase
YP_006020102.1	KEGG: shm:Shewmr7_2397 3-methylcrotonoyl-CoA carboxylase, alpha subunit; PFAM: Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; Biotin/lipoyl attachment
YP_006020103.1	PFAM: Crotonase, core; KEGG: shm:Shewmr7_2396 methylglutaconyl-CoA hydratase
YP_006020104.1	KEGG: shw:Sputw3181_2307 propionyl-CoA carboxylase; PFAM: Carboxyl transferase
YP_006020105.1	KEGG: son:SO_1897 isovaleryl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central region
YP_006020106.1	KEGG: shn:Shewana3_1673 MerR family transcriptional regulator; PFAM: Transcription regulator MerR, DNA binding; HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR
YP_006020107.1	KEGG: spc:Sputcn32_1721 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase
YP_006020108.1	PFAM: Small multidrug resistance protein; KEGG: shw:Sputw3181_2303 small multidrug resistance protein
YP_006020109.1	TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; KEGG: spc:Sputcn32_1723 6-phosphogluconate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase, C-terminal; 6-phosphogluconate dehydrogenase, NAD-binding
YP_006020110.1	PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: shw:Sputw3181_2301 LysR family transcriptional regulator
YP_006020111.1	PFAM: DoxX; KEGG: shn:Shewana3_1684 hypothetical protein
YP_006020112.1	PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; KEGG: shw:Sputw3181_2300 extradiol ring-cleavage dioxygenase III subunit B
YP_006020113.1	KEGG: son:SO_1910 1,4-dihydroxy-2-naphthoate octaprenyltransferase, putative; TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; PFAM: UbiA prenyltransferase
YP_006020114.1	KEGG: shw:Sputw3181_2298 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR
YP_006020115.1	TIGRFAM: Acyl-CoA thioesterase; KEGG: shw:Sputw3181_2297 acyl-CoA thioesterase II; PFAM: Acyl-CoA thioesterase
YP_006020116.1	KEGG: shw:Sputw3181_2296 hypothetical protein
YP_006020117.1	KEGG: son:SO_1915 serine protease; PFAM: Protease-associated PA; Peptidase S8/S53, subtilisin/kexin/sedolisin; Proteinase inhibitor I9, subtilisin propeptide; Peptidase, C-terminal, archaeal/bacterial
YP_006020118.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: shn:Shewana3_1691 LysR family transcriptional regulator
YP_006020119.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spc:Sputcn32_1731 major facilitator transporter
YP_006020120.1	PFAM: Integrase, catalytic core; KEGG: shm:Shewmr7_3980 integrase catalytic subunit
YP_006020121.1	KEGG: shm:Shewmr7_3734 transposase
YP_006020122.1	KEGG: ebi:EbC_27830 transcriptional regulator, LysR family; manually curated; PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR
YP_006020123.1	PFAM: Protein of unknown function DUF606; KEGG: ebi:EbC_27840 conserved uncharacterized protein
YP_006020124.1	PFAM: Protein of unknown function DUF606; KEGG: abb:ABBFA_001661 hypothetical protein
YP_006020125.1	KEGG: shw:Sputw3181_1504 two component, sigma54 specific, fis family transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core
YP_006020126.1	KEGG: shw:Sputw3181_1505 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_006020127.1	KEGG: she:Shewmr4_1361 TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit
YP_006020128.1	PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: shn:Shewana3_1415 tripartite ATP-independent periplasmic transporter DctQ
YP_006020129.1	KEGG: she:Shewmr4_1363 TRAP dicarboxylate transporter, DctP subunit; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7, bacteria
YP_006020130.1	KEGG: shn:Shewana3_1417 hypothetical protein
YP_006020131.1	TIGRFAM: Glutamyl-tRNA synthetase, class Ic, bacterial/mitochondrial; KEGG: shw:Sputw3181_1509 glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain
YP_006020132.1	PFAM: ABC transporter-like; ABC transporter, transmembrane region; KEGG: shw:Sputw3181_1510 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_006020133.1	manually curated; PFAM: AlkA, N-terminal; Ada DNA repair, metal-binding; Helix-turn-helix, AraC type; HhH-GPD domain; KEGG: shw:Sputw3181_1511 alcohol dehydrogenase; SMART: Helix-turn-helix, AraC domain; HhH-GPD domain
YP_006020134.1	KEGG: spc:Sputcn32_2496 methylated-DNA--protein-cysteine methyltransferase; TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding
YP_006020135.1	KEGG: shw:Sputw3181_1513 DEAD/DEAH box helicase domain-containing protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal
YP_006020136.1	PFAM: Dual specificity phosphatase, catalytic domain; KEGG: shw:Sputw3181_1514 dual specificity protein phosphatase
YP_006020137.1	KEGG: shw:Sputw3181_1515 putative CheW protein; PFAM: CheW-like protein; Signal transduction response regulator, receiver region; SMART: CheW-like protein; Signal transduction response regulator, receiver region
YP_006020138.1	KEGG: shn:Shewana3_1426 serine/threonine transporter SstT; HAMAP: Serine/threonine transporter sstT; PFAM: Sodium:dicarboxylate symporter
YP_006020139.1	PFAM: NADH:ubiquinone oxidoreductase intermediate-associated protein 30; KEGG: spc:Sputcn32_2491 NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30
YP_006020140.1	KEGG: shw:Sputw3181_1518 oxidoreductase domain-containing protein; PFAM: Oxidoreductase, N-terminal; Twin-arginine translocation pathway, signal sequence, subgroup
YP_006020141.1	KEGG: shw:Sputw3181_1519 hypothetical protein
YP_006020142.1	PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: spc:Sputcn32_2488 pseudouridylate synthase
YP_006020143.1	PFAM: Acyl carrier protein phosphodiesterase; KEGG: shw:Sputw3181_1521 hypothetical protein
YP_006020144.1	KEGG: shw:Sputw3181_1522 hypothetical protein
YP_006020145.1	TIGRFAM: Queuosine biosynthesis protein; HAMAP: S-adenosylmethionine:tRNA ribosyltransferase-isomerase; KEGG: shw:Sputw3181_1523 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein
YP_006020146.1	PFAM: Queuine/other tRNA-ribosyltransferase; TIGRFAM: Queuine tRNA-ribosyltransferase; Queuine/other tRNA-ribosyltransferase; HAMAP: Queuine tRNA-ribosyltransferase; KEGG: shw:Sputw3181_1524 queuine tRNA-ribosyltransferase
YP_006020147.1	KEGG: shw:Sputw3181_1525 preprotein translocase subunit YajC; TIGRFAM: YajC; PFAM: YajC
YP_006020148.1	manually curated; TIGRFAM: SecD export membrane protein; SecD/SecF/SecDF export membrane protein; KEGG: shm:Shewmr7_1449 preprotein translocase subunit SecD; PFAM: SecD/SecF/SecDF export membrane protein
YP_006020149.1	KEGG: shw:Sputw3181_1527 preprotein translocase subunit SecF; TIGRFAM: SecF protein; SecD/SecF/SecDF export membrane protein; PFAM: SecD/SecF/SecDF export membrane protein
YP_006020150.1	KEGG: shw:Sputw3181_1528 hypothetical protein
YP_006020151.1	KEGG: she:Shewmr4_1387 rhodanese domain-containing protein; PFAM: Rhodanese-like; SMART: Rhodanese-like
YP_006020152.1	KEGG: shw:Sputw3181_1529 siroheme synthase; TIGRFAM: Sirohaem synthase, N-terminal; PFAM: Sirohaem synthase, dimerisation domain
YP_006020153.1	PFAM: YaeQ; KEGG: spc:Sputcn32_2478 YaeQ family protein
YP_006020154.1	PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; Proteinase inhibitor I9, subtilisin propeptide; Protease-associated PA; Peptidase, C-terminal, archaeal/bacterial; Proprotein convertase, P; KEGG: shn:Shewana3_1443 peptidase S8/S53 subtilisin kexin sedolisin
YP_006020156.1	PFAM: GCN5-related N-acetyltransferase; KEGG: sdn:Sden_2619 GCN5-related N-acetyltransferase
YP_006020157.1	KEGG: shn:Shewana3_1444 rhodanese domain-containing protein; PFAM: Rhodanese-like; SMART: Rhodanese-like
YP_006020158.1	KEGG: shw:Sputw3181_1533 hypothetical protein
YP_006020159.1	PFAM: Acriflavin resistance protein; KEGG: shm:Shewmr7_1458 acriflavin resistance protein
YP_006020160.1	KEGG: she:Shewmr4_1394 RND family efflux transporter MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_006020161.1	PFAM: Protein of unknown function DUF541; KEGG: shw:Sputw3181_1536 hypothetical protein
YP_006020162.1	KEGG: she:Shewmr4_1396 hypothetical protein
YP_006020163.1	PFAM: Membrane protein, aromatic hydrocarbon degradation; KEGG: saz:Sama_2178 aromatic hydrocarbon degradation membrane protein
YP_006020164.1	KEGG: shn:Shewana3_1451 sodium/proline symporter; TIGRFAM: Sodium/proline symporter; Sodium/solute symporter, subgroup; PFAM: Sodium/solute symporter
YP_006020165.1	KEGG: shn:Shewana3_1452 hypothetical protein
YP_006020166.1	KEGG: shw:Sputw3181_1541 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2
YP_006020167.1	KEGG: shm:Shewmr7_1466 hypothetical protein
YP_006020168.1	KEGG: spc:Sputcn32_2465 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; SMART: von Willebrand factor, type A; Tetratricopeptide repeat
YP_006020169.1	KEGG: shw:Sputw3181_1544 von Willebrand factor, type A; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A
YP_006020170.1	KEGG: shw:Sputw3181_1545 hypothetical protein
YP_006020171.1	PFAM: Protein of unknown function DUF58; KEGG: shw:Sputw3181_1546 hypothetical protein
YP_006020172.1	PFAM: ATPase associated with various cellular activities, AAA-3; KEGG: shw:Sputw3181_1547 ATPase
YP_006020173.1	TIGRFAM: Acetyl-CoA C-acyltransferase FadI; Thiolase; HAMAP: Acetyl-CoA C-acyltransferase FadI; KEGG: shw:Sputw3181_1548 3-ketoacyl-CoA thiolase
YP_006020174.1	PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; Crotonase, core; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; TIGRFAM: Fatty oxidation complex, alpha subunit FadJ; HAMAP: Fatty oxidation complex, alpha subunit FadJ; KEGG: spc:Sputcn32_2459 multifunctional fatty acid oxidation complex subunit alpha
YP_006020175.1	KEGG: shw:Sputw3181_1550 hypothetical protein
YP_006020176.1	KEGG: swp:swp_3137 hypothetical protein
YP_006020177.1	KEGG: shm:Shewmr7_1475 hypothetical protein
YP_006020178.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold-3; Two component regulator three Y; Two component regulator propeller; PAS fold; KEGG: shm:Shewmr7_1476 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS; PAC motif
YP_006020179.1	KEGG: shw:Sputw3181_1553 peptidase M16 domain-containing protein; PFAM: Peptidase M16, N-terminal; Peptidase M16, C-terminal
YP_006020180.1	KEGG: shw:Sputw3181_1554 phosphohistidine phosphatase, SixA; TIGRFAM: Phosphohistidine phosphatase SixA, subgroup; PFAM: Phosphoglycerate mutase
YP_006020181.1	HAMAP: UPF0115 protein yfcN; PFAM: Smr protein/MutS2 C-terminal; KEGG: son:SO_3081 hypothetical protein; SMART: Smr protein/MutS2 C-terminal
YP_006020182.1	TIGRFAM: Ribosomal protein L3-specific, glutamine-N5-methyltransferase; Modification methylase HemK; KEGG: shw:Sputw3181_1556 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; PFAM: Methyltransferase small
YP_006020183.1	TIGRFAM: Chorismate synthase; KEGG: shw:Sputw3181_1557 chorismate synthase; PFAM: Chorismate synthase
YP_006020184.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spc:Sputcn32_2450 major facilitator transporter
YP_006020185.1	PFAM: ATP-NAD/AcoX kinase; KEGG: shw:Sputw3181_1559 ATP-NAD/AcoX kinase
YP_006020186.1	PFAM: Uncharacterised protein family YfcL; KEGG: shw:Sputw3181_1560 hypothetical protein
YP_006020187.1	PFAM: tRNA/rRNA methyltransferase, SpoU; KEGG: shw:Sputw3181_1561 tRNA/rRNA methyltransferase (SpoU)
YP_006020188.1	TIGRFAM: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal; HAMAP: tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmC; KEGG: spc:Sputcn32_2446 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; Protein of unknown function DUF752
YP_006020189.1	KEGG: shw:Sputw3181_1563 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal
YP_006020190.1	HAMAP: Erythronate-4-phosphate dehydrogenase; KEGG: spc:Sputcn32_2444 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region
YP_006020191.1	TIGRFAM: Aspartate-semialdehyde dehydrogenase, bacterial; KEGG: shw:Sputw3181_1565 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase, dimerisation region; Semialdehyde dehydrogenase, NAD-binding
YP_006020192.1	TIGRFAM: Motility protein FimV, N-terminal; Motility protein FimV, C-terminal; KEGG: son:SO_3069 hypothetical protein
YP_006020193.1	TIGRFAM: Pseudouridine synthase I, TruA; HAMAP: Pseudouridine synthase I, TruA; KEGG: spc:Sputcn32_2441 tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain
YP_006020194.1	TIGRFAM: Folylpolyglutamate synthetase; KEGG: shw:Sputw3181_1568 FolC bifunctional protein; PFAM: Mur ligase, C-terminal; Mur ligase, central
YP_006020195.1	PFAM: Sporulation/cell division region, bacteria; KEGG: shw:Sputw3181_1569 sporulation domain-containing protein
YP_006020196.1	PFAM: Colicin V production protein; KEGG: shw:Sputw3181_1570 colicin V production protein
YP_006020197.1	TIGRFAM: Amidophosphoribosyl transferase; KEGG: shw:Sputw3181_1571 amidophosphoribosyltransferase; PFAM: Glutamine amidotransferase, class-II; Phosphoribosyltransferase
YP_006020198.1	KEGG: spc:Sputcn32_2436 hypothetical protein
YP_006020199.1	SMART: DNA topoisomerase, type IA, DNA-binding; DNA topoisomerase, type IA, domain 2; Toprim domain, subgroup; TIGRFAM: DNA topoisomerase III, bacterial-type; KEGG: shw:Sputw3181_1573 DNA topoisomerase III; PFAM: DNA topoisomerase, type IA, central; Toprim domain
YP_006020200.1	KEGG: shw:Sputw3181_1579 alpha/beta hydrolase fold; PFAM: Alpha/beta hydrolase fold-1
YP_006020201.1	KEGG: shw:Sputw3181_1580 beta-lactamase domain-containing protein
YP_006020202.1	KEGG: son:SO_3052 methyl-accepting chemotaxis protein; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling
YP_006020203.1	PFAM: XdhC- CoxI; KEGG: shw:Sputw3181_1581 hypothetical protein
YP_006020204.1	KEGG: shw:Sputw3181_1582 hypothetical protein
YP_006020205.1	KEGG: shw:Sputw3181_1583 2Fe-2S iron-sulfur cluster binding domain-containing protein; PFAM: [2Fe-2S]-binding; Ferredoxin
YP_006020206.1	KEGG: shw:Sputw3181_1584 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Twin-arginine translocation pathway, signal sequence, subgroup
YP_006020207.1	PFAM: Protein of unknown function DUF1097; KEGG: son:SO_3047 hypothetical protein
YP_006020208.1	KEGG: she:Shewmr4_1442 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling
YP_006020209.1	PFAM: DSBA oxidoreductase; KEGG: cps:CPS_1239 DsbA-like thioredoxin domain-containing protein
YP_006020210.1	KEGG: pin:Ping_2355 hypothetical protein
YP_006020211.1	KEGG: pin:Ping_3099 hypothetical protein
YP_006020212.1	KEGG: mmw:Mmwyl1_1963 CRP/FNR family transcriptional regulator; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp
YP_006020213.1	KEGG: rfr:Rfer_4032 hypothetical protein
YP_006020214.1	KEGG: mmw:Mmwyl1_1966 hypothetical protein
YP_006020215.1	TIGRFAM: AP endonuclease, family 1; Exodeoxyribonuclease III xth; KEGG: shw:Sputw3181_1590 exonuclease III; PFAM: Endonuclease/exonuclease/phosphatase
YP_006020216.1	PFAM: YCII-related; KEGG: shn:Shewana3_1504 YciI-like protein
YP_006020217.1	TIGRFAM: Intracellular septation protein A; HAMAP: Intracellular septation protein A; KEGG: shw:Sputw3181_1592 intracellular septation protein A; PFAM: Intracellular septation protein A
YP_006020218.1	PFAM: Ferric iron reductase; KEGG: shw:Sputw3181_1593 ferric iron reductase
YP_006020219.1	KEGG: spc:Sputcn32_2414 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug
YP_006020220.1	PFAM: IucA/IucC; KEGG: shw:Sputw3181_1595 IucA/IucC family protein
YP_006020221.1	PFAM: Siderophore biosynthesis protein, conserved region; KEGG: shw:Sputw3181_1596 siderophore biosynthesis protein, putative
YP_006020222.1	KEGG: shw:Sputw3181_1597 L-lysine 6-monooxygenase (NADPH)
YP_006020223.1	KEGG: shw:Sputw3181_1598 hypothetical protein
YP_006020224.1	PFAM: Tryptophan synthase, alpha chain; TIGRFAM: Tryptophan synthase, alpha chain; HAMAP: Tryptophan synthase, alpha chain; KEGG: shw:Sputw3181_1600 tryptophan synthase subunit alpha
YP_006020225.1	PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; TIGRFAM: Tryptophan synthase, beta chain; HAMAP: Tryptophan synthase beta chain; KEGG: shw:Sputw3181_1601 tryptophan synthase subunit beta
YP_006020226.1	KEGG: spc:Sputcn32_2406 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase; PFAM: Indole-3-glycerol phosphate synthase; N-(5'phosphoribosyl)anthranilate isomerase (PRAI)
YP_006020227.1	PFAM: Glycosyl transferase, family 3; Glycosyl transferase, family 3, N-terminal; TIGRFAM: Anthranilate phosphoribosyl transferase; HAMAP: Anthranilate phosphoribosyl transferase; KEGG: spc:Sputcn32_2405 anthranilate phosphoribosyltransferase
YP_006020228.1	TIGRFAM: Glutamine amidotransferase of anthranilate synthase; KEGG: shw:Sputw3181_1604 anthranilate synthase component II; PFAM: Glutamine amidotransferase class-I, C-terminal
YP_006020229.1	TIGRFAM: Anthranilate synthase component I, TrpE; KEGG: shw:Sputw3181_1605 anthranilate synthase component I; PFAM: Chorismate binding, C-terminal; Anthranilate synthase component I, N-terminal
YP_006020230.1	KEGG: shw:Sputw3181_1606 phosphotransferase domain-containing protein; PFAM: PHP, C-terminal; SMART: Polymerase/histidinol phosphatase, N-terminal
YP_006020231.1	KEGG: shw:Sputw3181_1607 SUA5/YciO/YrdC/YwlC family protein; TIGRFAM: Sua5/YciO/YrdC/YwlC; PFAM: Sua5/YciO/YrdC, N-terminal
YP_006020232.1	KEGG: shw:Sputw3181_1608 chromosome segregation and condensation protein ScpA; HAMAP: Segregation and condensation protein A; PFAM: Prokaryotic chromosome segregation/condensation protein ScpA
YP_006020233.1	KEGG: shw:Sputw3181_1609 putative transcriptional regulator; TIGRFAM: Chromosome segregation/condensation protein ScpB, prokaryote; PFAM: Chromosome segregation/condensation protein ScpB, prokaryote
YP_006020234.1	TIGRFAM: Pseudouridine synthase, RsuA and RluB/E/F; PFAM: RNA-binding S4; Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: shw:Sputw3181_1610 pseudouridine synthase; SMART: RNA-binding S4
YP_006020235.1	KEGG: spc:Sputcn32_2397 hypothetical protein
YP_006020236.1	PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: shm:Shewmr7_1534 short chain dehydrogenase
YP_006020237.1	TIGRFAM: Lipase, Pla-1/cef, extracellular; KEGG: she:Shewmr4_1469 hypothetical protein
YP_006020238.1	PFAM: Peptidase S49, N-terminal proteobacteria; Peptidase S49; KEGG: shn:Shewana3_1530 putative periplasmic protease
YP_006020239.1	KEGG: shn:Shewana3_1534 hypothetical protein
YP_006020240.1	PFAM: Bacterial virulence; KEGG: shn:Shewana3_1535 type IV secretory pathway VirJ component-like protein
YP_006020241.1	KEGG: shw:Sputw3181_1615 hypothetical protein
YP_006020242.1	KEGG: shw:Sputw3181_1616 arylesterase; PFAM: Lipase, GDSL
YP_006020243.1	PFAM: ABC transporter-like; KEGG: shw:Sputw3181_1617 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_006020244.1	PFAM: Protein of unknown function DUF214, permase predicted; KEGG: shw:Sputw3181_1618 hypothetical protein
YP_006020245.1	TIGRFAM: Peptidase S26A, signal peptidase I; KEGG: son:SO_2924 signal peptidase I family protein; PFAM: Peptidase S24/S26A/S26B, conserved region
YP_006020246.1	KEGG: shw:Sputw3181_1619 sodium/glutamate symporter; TIGRFAM: Sodium/glutamate symporter; PFAM: Sodium/glutamate symporter
YP_006020247.1	PFAM: Domain of unknown function DUF1731, C-terminal; NAD-dependent epimerase/dehydratase; KEGG: shw:Sputw3181_1620 hypothetical protein
YP_006020248.1	KEGG: shw:Sputw3181_1621 D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase; TIGRFAM: Dihydroneopterin aldolase; PFAM: Dihydroneopterin aldolase
YP_006020249.1	PFAM: Uncharacterised protein family UPF0118; KEGG: shm:Shewmr7_1550 hypothetical protein
YP_006020250.1	PFAM: S-adenosylmethionine-dependent methyltransferase; KEGG: spc:Sputcn32_2385 hypothetical protein
YP_006020251.1	KEGG: shn:Shewana3_1546 hypothetical protein
YP_006020252.1	KEGG: shw:Sputw3181_1624 hypothetical protein
YP_006020253.1	KEGG: shn:Shewana3_1548 hypothetical protein
YP_006020254.1	TIGRFAM: Phosphate acetyltransferase; KEGG: shw:Sputw3181_1627 phosphate acetyltransferase; PFAM: Phosphate acetyl/butaryl transferase; DRTGG
YP_006020255.1	PFAM: Acetate/butyrate kinase; TIGRFAM: Acetate kinase; HAMAP: Acetate kinase; KEGG: shw:Sputw3181_1628 acetate kinase
YP_006020256.1	PFAM: Uncharacterised protein family UPF0208; KEGG: shw:Sputw3181_1629 hypothetical protein
YP_006020257.1	TIGRFAM: Pyruvate formate-lyase activating; KEGG: shw:Sputw3181_1630 pyruvate formate lyase-activating enzyme 1; PFAM: Radical SAM
YP_006020258.1	TIGRFAM: Formate acetyltransferase; KEGG: shw:Sputw3181_1631 formate acetyltransferase; PFAM: Pyruvate formate-lyase, PFL; Formate C-acetyltransferase glycine radical
YP_006020259.1	KEGG: shn:Shewana3_1556 methionine gamma-lyase; TIGRFAM: Formate/nitrite transporter; PFAM: Formate/nitrite transporter
YP_006020260.1	PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: sdn:Sden_2404 TonB-dependent receptor
YP_006020261.1	PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: shw:Sputw3181_1637 C4-dicarboxylate transporter/malic acid transport protein
YP_006020262.1	PFAM: O-methyltransferase, family 2; KEGG: spc:Sputcn32_2371 O-methyltransferase family protein
YP_006020263.1	TIGRFAM: Cysteine synthase A; Cysteine synthase K/M; KEGG: shw:Sputw3181_1639 cysteine synthase A; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit
YP_006020264.1	PFAM: RDD; KEGG: shw:Sputw3181_1640 RDD domain-containing protein
YP_006020265.1	KEGG: shw:Sputw3181_1641 3-oxoacyl-(acyl carrier protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
YP_006020266.1	PFAM: Protein of unknown function DUF540; KEGG: shm:Shewmr7_1572 putative sulfate transport protein CysZ
YP_006020267.1	KEGG: shw:Sputw3181_1643 chromosome segregation protein SMC; TIGRFAM: Chromosome segregation protein SMC; PFAM: RecF/RecN/SMC protein, N-terminal
YP_006020268.1	SMART: ZipA, C-terminal FtsZ-binding region; TIGRFAM: Cell division protein ZipA; KEGG: she:Shewmr4_1507 cell division protein ZipA; HAMAP: Cell division protein zipA-like protein; PFAM: ZipA, C-terminal FtsZ-binding region
YP_006020269.1	SMART: NAD-dependent DNA ligase, N-terminal; Helix-hairpin-helix DNA-binding motif, class 1; BRCT; TIGRFAM: NAD-dependent DNA ligase; KEGG: shw:Sputw3181_1645 DNA ligase, NAD-dependent; HAMAP: DNA ligase; PFAM: NAD-dependent DNA ligase, adenylation; NAD-dependent DNA ligase, OB-fold; Zinc-finger, NAD-dependent DNA ligase C4-type; Helix-hairpin-helix motif; BRCT
YP_006020270.1	KEGG: shn:Shewana3_1570 hypothetical protein
YP_006020271.1	KEGG: she:Shewmr4_1510 metal dependent phosphohydrolase; TIGRFAM: HDIG; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain
YP_006020272.1	PFAM: NADP oxidoreductase, coenzyme F420-dependent; KEGG: spc:Sputcn32_2361 NAD-dependent epimerase/dehydratase
YP_006020273.1	PFAM: DSBA oxidoreductase; KEGG: shn:Shewana3_1573 DsbA oxidoreductase
YP_006020274.1	TIGRFAM: Probable solute:sodium symporter, small subunit; KEGG: son:SO_2858 hypothetical protein
YP_006020275.1	KEGG: shm:Shewmr7_1581 Na+/solute symporter; TIGRFAM: Sodium/solute symporter, VC2705 subfamily; PFAM: Sodium/solute symporter
YP_006020276.1	KEGG: shw:Sputw3181_1652 cyclic nucleotide-binding protein; PFAM: Protein of unknown function DUF294, nucleotidyltransferase putative; Cystathionine beta-synthase, core; Cyclic nucleotide-binding; Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding; SMART: Cystathionine beta-synthase, core
YP_006020277.1	KEGG: spc:Sputcn32_2356 exonuclease, RNase T and DNA polymerase III; PFAM: Exonuclease, RNase T/DNA polymerase III; SMART: Exonuclease
YP_006020278.1	KEGG: she:Shewmr4_1519 hypothetical protein
YP_006020279.1	PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: Beta-ketoacyl-acyl carrier protein synthase III (FabH); HAMAP: Beta-ketoacyl-acyl carrier protein synthase III (FabH); KEGG: shm:Shewmr7_1587 3-oxoacyl-(acyl carrier protein) synthase III
YP_006020280.1	KEGG: shw:Sputw3181_1655 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR
YP_006020281.1	KEGG: shw:Sputw3181_1656 D,D-heptose 1,7-bisphosphate phosphatase; TIGRFAM: D,D-heptose 1,7-bisphosphate phosphatase; Histidinol-phosphate phosphatase; HAD-superfamily hydrolase, subfamily IIIA; PFAM: Haloacid dehalogenase-like hydrolase
YP_006020282.1	KEGG: spc:Sputcn32_1610 hypothetical protein; HAMAP: UPF0319 protein yccT; PFAM: Protein of unknown function DUF2057
YP_006020283.1	TIGRFAM: 2 ,3 -cyclic-nucleotide 2 -phosphodiesterase; KEGG: shw:Sputw3181_2411 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; PFAM: 5'-Nucleotidase, C-terminal; Metallophosphoesterase
YP_006020284.1	KEGG: shw:Sputw3181_2410 peptidyl-dipeptidase DCP; PFAM: Peptidase M3A/M3B, thimet/oligopeptidase F
YP_006020285.1	KEGG: shw:Sputw3181_3078 hypothetical protein
YP_006020286.1	PFAM: GCN5-related N-acetyltransferase; KEGG: spc:Sputcn32_2949 GCN5-related N-acetyltransferase
YP_006020289.1	KEGG: she:Shewmr4_2302 peptidyl-dipeptidase DCP; PFAM: Peptidase M3A/M3B, thimet/oligopeptidase F
YP_006020290.1	KEGG: she:Shewmr4_2301 hypothetical protein; TIGRFAM: Peptidase M20A, peptidase V related; PFAM: Peptidase M20; Peptidase M20, dimerisation
YP_006020291.1	KEGG: vfm:VFMJ11_A0645 hypothetical protein
YP_006020292.1	TIGRFAM: Gamma-glutamyltranspeptidase; KEGG: shn:Shewana3_2487 gamma-glutamyltransferase 1; PFAM: Gamma-glutamyltranspeptidase
YP_006020293.1	PFAM: Protein of unknown function DUF482; KEGG: shw:Sputw3181_2357 hypothetical protein
YP_006020294.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: shm:Shewmr7_2367 lysine exporter protein LysE/YggA
YP_006020295.1	KEGG: son:SO_1961 maltose O-acetyltransferase; PFAM: Bacterial transferase hexapeptide repeat
YP_006020296.1	TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; KEGG: spc:Sputcn32_1670 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase
YP_006020297.1	PFAM: Homogentisate 1,2-dioxygenase; KEGG: spc:Sputcn32_1671 homogentisate 1,2-dioxygenase
YP_006020298.1	PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: shw:Sputw3181_2353 LysR family transcriptional regulator
YP_006020299.1	KEGG: shw:Sputw3181_2352 hypothetical protein; TIGRFAM: Protein of unknown function DUF124; PFAM: Protein of unknown function DUF124
YP_006020300.1	KEGG: son:SO_1967 hypothetical protein
YP_006020301.1	KEGG: shn:Shewana3_2478 hypothetical protein
YP_006020302.1	PFAM: Uncharacterised protein family UPF0310; KEGG: shm:Shewmr7_2359 hypothetical protein
YP_006020303.1	KEGG: shw:Sputw3181_2347 hypothetical protein
YP_006020304.1	KEGG: shw:Sputw3181_2346 AMP-binding domain protein; PFAM: AMP-dependent synthetase/ligase
YP_006020305.1	PFAM: Protein of unknown function, PGPGW, transmembrane; KEGG: shn:Shewana3_2474 hypothetical protein
YP_006020306.1	KEGG: shm:Shewmr7_2355 ABC transporter
YP_006020307.1	PFAM: Peptidase M14, carboxypeptidase A; KEGG: she:Shewmr4_2282 zinc carboxypeptidase-related protein
YP_006020308.1	PFAM: Alpha/beta hydrolase fold-1; KEGG: shm:Shewmr7_2353 alpha/beta hydrolase fold
YP_006020309.1	PFAM: Protein of unknown function DUF307; KEGG: shw:Sputw3181_1678 hypothetical protein
YP_006020310.1	KEGG: spc:Sputcn32_2329 hypothetical protein
YP_006020311.1	KEGG: shw:Sputw3181_1684 hypothetical protein
YP_006020313.1	TIGRFAM: Anti-sigma factor ChrR, putative; KEGG: shw:Sputw3181_1685 anti-ECFsigma factor, ChrR
YP_006020314.1	KEGG: shw:Sputw3181_1686 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 4
YP_006020315.1	KEGG: she:Shewmr4_2274 peptidase S16, lon domain-containing protein; PFAM: Peptidase S16, lon N-terminal; SMART: Peptidase S16, lon N-terminal
YP_006020316.1	PFAM: Methyltransferase type 11; KEGG: shm:Shewmr7_2345 methyltransferase type 11
YP_006020317.1	KEGG: shw:Sputw3181_1689 putative CheW protein; PFAM: CheW-like protein; Signal transduction response regulator, receiver region; SMART: CheW-like protein; Signal transduction response regulator, receiver region
YP_006020318.1	KEGG: shw:Sputw3181_1690 hypothetical protein
YP_006020319.1	KEGG: shw:Sputw3181_1691 hypothetical protein
YP_006020320.1	KEGG: shw:Sputw3181_1692 lytic murein transglycosylase; TIGRFAM: Lytic murein transglycosylase; PFAM: Peptidoglycan binding-like
YP_006020321.1	PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; KEGG: shn:Shewana3_2458 peptidylprolyl isomerase, FKBP-type
YP_006020322.1	KEGG: shw:Sputw3181_1694 peptidase M1, membrane alanine aminopeptidase; PFAM: Peptidase M1, membrane alanine aminopeptidase, N-terminal; Peptidase M1, leukotriene A4 hydrolase, aminopeptidase C-terminal
YP_006020323.1	KEGG: shw:Sputw3181_1695 hypothetical protein
YP_006020324.1	KEGG: shw:Sputw3181_1696 carboxylesterase; PFAM: Phospholipase/carboxylesterase
YP_006020325.1	KEGG: she:Shewmr4_2264 bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; PFAM: 5'-Nucleotidase, C-terminal; Metallophosphoesterase
YP_006020326.1	KEGG: shw:Sputw3181_1698 TraR/DksA family transcriptional regulator
YP_006020327.1	KEGG: shw:Sputw3181_1699 dihydrouridine synthase, DuS; manually curated; PFAM: tRNA-dihydrouridine synthase
YP_006020328.1	KEGG: she:Shewmr4_2260 hypothetical protein
YP_006020329.1	KEGG: spc:Sputcn32_2307 hypothetical protein; HAMAP: UPF0276 protein; PFAM: Protein of unknown function DUF692
YP_006020330.1	PFAM: Protein of unknown function DUF2063; KEGG: shw:Sputw3181_1702 hypothetical protein
YP_006020331.1	KEGG: shm:Shewmr7_2329 hypothetical protein
YP_006020332.1	PFAM: Protein of unknown function DUF454; KEGG: shw:Sputw3181_1704 hypothetical protein
YP_006020333.1	TIGRFAM: Adenine phosphoribosyl transferase; HAMAP: Adenine phosphoribosyl transferase; KEGG: shw:Sputw3181_1705 adenine phosphoribosyltransferase; PFAM: Phosphoribosyltransferase
YP_006020334.1	TIGRFAM: DNA polymerase III, subunit gamma/ tau; PFAM: ATPase, AAA-type, core; KEGG: she:Shewmr4_2254 DNA polymerase III, subunits gamma and tau; SMART: ATPase, AAA+ type, core
YP_006020335.1	KEGG: shw:Sputw3181_1707 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0133; PFAM: Uncharacterised protein family UPF0133
YP_006020336.1	SMART: Toprim domain, subgroup; TIGRFAM: RecR protein; KEGG: shw:Sputw3181_1708 recombination protein RecR; HAMAP: Recombination protein recR; PFAM: Toprim domain; Zinc finger C4-type, RecR
YP_006020337.1	PFAM: GCN5-related N-acetyltransferase; KEGG: spc:Sputcn32_1266 GCN5-related N-acetyltransferase
YP_006020338.1	KEGG: pat:Patl_1925 hypothetical protein
YP_006020339.1	KEGG: shw:Sputw3181_2393 23S rRNA m(2)G2445 methyltransferase; PFAM: Putative RNA methylase; Protein of unknown function methylase putative
YP_006020340.1	PFAM: Glutaredoxin 2; KEGG: son:SO_1852 hypothetical protein
YP_006020341.1	KEGG: spc:Sputcn32_1634 ABC transporter ATPase component; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core
YP_006020342.1	KEGG: spc:Sputcn32_1635 hypothetical protein
YP_006020343.1	PFAM: Ribosome modulation factor; KEGG: shw:Sputw3181_2389 ribosome modulation factor
YP_006020344.1	PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; TIGRFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA; HAMAP: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase; KEGG: shw:Sputw3181_2388 3-hydroxydecanoyl-(acyl carrier protein) dehydratase
YP_006020345.1	KEGG: shw:Sputw3181_2387 ATP-dependent protease
YP_006020346.1	KEGG: pfl:PFL_2312 methyl-accepting chemotaxis transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; Cache; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_006020347.1	KEGG: shn:Shewana3_1608 response regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal
YP_006020348.1	SMART: Excinuclease ABC, C subunit, N-terminal; Helix-hairpin-helix DNA-binding motif, class 1; TIGRFAM: Excinuclease ABC, C subunit; KEGG: shw:Sputw3181_2385 excinuclease ABC subunit C; HAMAP: UvrABC system protein C; PFAM: Excinuclease ABC, C subunit, C-terminal; Excinuclease ABC, C subunit, N-terminal; UvrB/UvrC protein; Helix-hairpin-helix motif
YP_006020349.1	TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; KEGG: shw:Sputw3181_2384 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase
YP_006020350.1	PFAM: Glucan biosynthesis, periplasmic, MdoG C-terminal; KEGG: shm:Shewmr7_2425 glucan biosynthesis protein G
YP_006020351.1	HAMAP: Peptidase E; KEGG: shn:Shewana3_2513 peptidase E; PFAM: Peptidase S51, dipeptidase E
YP_006020352.1	HAMAP: protease htpX; KEGG: shm:Shewmr7_2423 heat shock protein HtpX
YP_006020353.1	KEGG: son:SO_2866 chromosome replication initiation inhibitor protein; TIGRFAM: Transcriptional regulator, ArgP; PFAM: HTH transcriptional regulator, LysR
YP_006020354.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: shm:Shewmr7_2415 lysine exporter protein LysE/YggA
YP_006020355.1	PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: shn:Shewana3_1654 thioredoxin-dependent thiol peroxidase
YP_006020356.1	KEGG: son:SO_1878 glycine cleavage system transcriptional repressor, putative
YP_006020357.1	PFAM: Dihydrodipicolinate synthetase; TIGRFAM: Dihydrodipicolinate synthase subfamily; HAMAP: Dihydrodipicolinate synthase; KEGG: shm:Shewmr7_2412 dihydrodipicolinate synthase
YP_006020358.1	PFAM: NlpBDapX lipoprotein; KEGG: she:Shewmr4_2339 NlpB/DapX family lipoprotein
YP_006020359.1	KEGG: shm:Shewmr7_2410 RND family efflux transporter MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_006020360.1	PFAM: Acriflavin resistance protein; KEGG: shm:Shewmr7_2409 acriflavin resistance protein
YP_006020361.1	HAMAP: Chaperone protein htpG; PFAM: Heat shock protein Hsp90, C-terminal; ATP-binding region, ATPase-like; KEGG: she:Shewmr4_2251 heat shock protein 90; SMART: ATP-binding region, ATPase-like
YP_006020362.1	PFAM: Thioredoxin domain; KEGG: shw:Sputw3181_1710 thioredoxin domain-containing protein
YP_006020363.1	TIGRFAM: Adenylate kinase, subfamily; HAMAP: Adenylate kinase; KEGG: shw:Sputw3181_1711 adenylate kinase; PFAM: Adenylate kinase; Adenylate kinase, zinc-finger lid region
YP_006020364.1	PFAM: Ferrochelatase; TIGRFAM: Ferrochelatase; HAMAP: Ferrochelatase; KEGG: shw:Sputw3181_1712 ferrochelatase
YP_006020365.1	KEGG: shw:Sputw3181_1713 inosine kinase; PFAM: Carbohydrate/purine kinase
YP_006020366.1	TIGRFAM: NAD+ synthase; HAMAP: NH(3)-dependent NAD(+) synthetase; KEGG: son:SO_2021 NAD synthetase; PFAM: NAD+ synthase
YP_006020367.1	KEGG: shw:Sputw3181_1715 hypothetical protein
YP_006020368.1	KEGG: shm:Shewmr7_2316 hypothetical protein
YP_006020369.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: shm:Shewmr7_2315 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_006020370.1	KEGG: plu:plu2947 hypothetical protein
YP_006020371.1	KEGG: plu:plu2946 hypothetical protein
YP_006020372.1	KEGG: sdn:Sden_3275 GP46
YP_006020373.1	KEGG: sfr:Sfri_1641 hypothetical protein
YP_006020374.1	KEGG: sdn:Sden_3277 hypothetical protein
YP_006020375.1	KEGG: sdn:Sden_3276 hypothetical protein
YP_006020376.1	KEGG: sdn:Sden_3274 hypothetical protein
YP_006020377.1	KEGG: sdn:Sden_3273 hypothetical protein
YP_006020378.1	KEGG: sdn:Sden_3272 hypothetical protein
YP_006020381.1	PFAM: Nucleotide-binding protein, predicted, TIR-like; KEGG: dar:Daro_1916 nucleic acid-binding protein
YP_006020383.1	PFAM: Abortive phage infection; KEGG: bbr:BB2490 abortive infection phage resistance protein
YP_006020384.1	KEGG: sdn:Sden_3268 transciptional regulator; PFAM: Helix-turn-helix type 3; Peptidase S24/S26A/S26B, conserved region; SMART: Helix-turn-helix type 3
YP_006020385.1	KEGG: sdn:Sden_3267 hypothetical protein
YP_006020386.1	KEGG: sdn:Sden_3266 hypothetical protein
YP_006020389.1	KEGG: sdn:Sden_3265 hypothetical protein
YP_006020390.1	PFAM: Replication P; KEGG: sdn:Sden_3262 replication P
YP_006020392.1	PFAM: Integrase, catalytic core, phage; KEGG: sdn:Sden_3261 phage integrase
YP_006020393.1	KEGG: sfr:Sfri_1656 transcriptional regulator, XRE family protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3
YP_006020394.1	KEGG: sdn:Sden_3259 hypothetical protein
YP_006020395.1	SMART: ATPase, AAA+ type, core; KEGG: xac:XAC2215 hypothetical protein
YP_006020396.1	KEGG: xac:XAC2214 hypothetical protein
YP_006020397.1	KEGG: HipA N-terminal domain protein; TIGRFAM: HipA, N-terminal; PFAM: HipA-like, C-terminal; HipA-like, N-terminal
YP_006020398.1	KEGG: helix-turn-helix domain protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3
YP_006020400.1	KEGG: sdn:Sden_2809 hypothetical protein
YP_006020404.1	KEGG: dps:DP2340 hypothetical protein
YP_006020405.1	PFAM: Ion transport 2; KEGG: dat:HRM2_10380 putative potassium channel
YP_006020406.1	PFAM: Protein of unknown function DUF952; KEGG: hel:HELO_4221 hypothetical protein
YP_006020408.1	PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: sdn:Sden_3236 peptidase S24, S26A and S26B
YP_006020409.1	manually curated; KEGG: sdn:Sden_3235 DNA-directed DNA polymerase; PFAM: DNA-repair protein, UmuC-like
YP_006020411.1	KEGG: afe:Lferr_0255 hypothetical protein
YP_006020413.1	KEGG: cvi:CV_0650 hypothetical protein
YP_006020414.1	KEGG: sdn:Sden_3237 hypothetical protein
YP_006020415.1	KEGG: ppr:PBPRA1526 hypothetical protein; HAMAP: Protein of unknown function DUF358; PFAM: Protein of unknown function DUF358
YP_006020416.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: shw:Sputw3181_1716 LysR family transcriptional regulator
YP_006020417.1	KEGG: shw:Sputw3181_1717 NADH:flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal
YP_006020418.1	PFAM: Sulfatase; KEGG: shn:Shewana3_2428 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
YP_006020419.1	KEGG: shw:Sputw3181_1719 hypothetical protein; HAMAP: Uncharacterised protein family UPF0352; PFAM: Uncharacterised protein family UPF0352
YP_006020420.1	KEGG: shw:Sputw3181_1720 nucleoid-associated protein NdpA; HAMAP: Nucleoid-associated protein ndpA; PFAM: 37kDa nucleoid-associated bacterial protein
YP_006020421.1	KEGG: shw:Sputw3181_1721 cytochrome-c peroxidase; PFAM: Di-haem cytochrome c peroxidase
YP_006020422.1	PFAM: 6-pyruvoyl tetrahydropterin synthase-related; KEGG: shn:Shewana3_2424 isocitrate dehydrogenase (NADP(+))
YP_006020423.1	PFAM: Peptidase M23; KEGG: shw:Sputw3181_1723 peptidase M23B
YP_006020424.1	KEGG: shw:Sputw3181_1724 hypothetical protein
YP_006020425.1	PFAM: Protein of unknown function DUF991; KEGG: spc:Sputcn32_2283 hypothetical protein
YP_006020426.1	PFAM: YkuD domain; KEGG: shw:Sputw3181_1726 ErfK/YbiS/YcfS/YnhG family protein
YP_006020427.1	PFAM: Ion transport; KEGG: shn:Shewana3_2419 ion transport protein
YP_006020428.1	KEGG: shw:Sputw3181_1728 MATE efflux family protein; TIGRFAM: Multi antimicrobial extrusion protein MatE; PFAM: Multi antimicrobial extrusion protein MatE
YP_006020429.1	KEGG: son:SO_1921 hypothetical protein
YP_006020430.1	KEGG: shw:Sputw3181_1730 hypothetical protein; HAMAP: Uncharacterised conserved protein UCP029143; PFAM: ASCH domain
YP_006020431.1	PFAM: Acriflavin resistance protein; KEGG: shw:Sputw3181_1731 acriflavin resistance protein
YP_006020432.1	PFAM: Acriflavin resistance protein; KEGG: shn:Shewana3_1703 acriflavin resistance protein
YP_006020433.1	KEGG: shn:Shewana3_1704 RND family efflux transporter MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_006020434.1	KEGG: shm:Shewmr7_1705 type II citrate synthase; TIGRFAM: Citrate synthase, type II; PFAM: Citrate synthase-like
YP_006020435.1	KEGG: shn:Shewana3_1706 succinate dehydrogenase subunit C; TIGRFAM: Succinate dehydrogenase, cytochrome b556 subunit; PFAM: Succinate dehydrogenase, cytochrome b subunit
YP_006020436.1	TIGRFAM: Succinate dehydrogenase, hydrophobic membrane anchor; KEGG: shw:Sputw3181_1736 putative succinate dehydrogenase, hydrophobic subunit
YP_006020437.1	TIGRFAM: Succinate dehydrogenase, flavoprotein subunit; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; KEGG: shw:Sputw3181_1737 succinate dehydrogenase flavoprotein subunit; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal
YP_006020438.1	KEGG: spc:Sputcn32_2270 succinate dehydrogenase iron-sulfur subunit; TIGRFAM: Succinate dehydrogenase/fumarate reductase iron-sulphur protein
YP_006020439.1	TIGRFAM: 2-oxoglutarate dehydrogenase, E1 component; KEGG: shw:Sputw3181_1739 2-oxoglutarate dehydrogenase E1 component; PFAM: Transketolase-like, pyrimidine-binding domain; Dehydrogenase, E1 component
YP_006020440.1	TIGRFAM: Dihydrolipoamide succinyltransferase; KEGG: shw:Sputw3181_1740 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding
YP_006020441.1	PFAM: ATP-grasp fold, succinyl-CoA synthetase-type; ATP-citrate lyase/succinyl-CoA ligase; TIGRFAM: Succinyl-CoA synthetase, beta subunit; HAMAP: Succinyl-CoA ligase [ADP-forming] subunit beta; KEGG: shm:Shewmr7_1712 succinyl-CoA synthetase subunit beta
YP_006020442.1	TIGRFAM: Succinyl-CoA ligase, alpha subunit; KEGG: son:SO_1933 succinyl-CoA synthase, alpha subunit; PFAM: ATP-citrate lyase/succinyl-CoA ligase; CoA-binding
YP_006020443.1	PFAM: Transcription elongation factor, GreA/GreB region, prokaryotic; KEGG: shn:Shewana3_1714 GreA/GreB family elongation factor
YP_006020444.1	PFAM: GCN5-related N-acetyltransferase; KEGG: shw:Sputw3181_1744 GCN5-related N-acetyltransferase
YP_006020445.1	PFAM: Ferric-uptake regulator; KEGG: shw:Sputw3181_1745 ferric uptake regulator
YP_006020446.1	KEGG: shn:Shewana3_1717 NAD-dependent deacetylase; HAMAP: NAD-dependent deacetylase; PFAM: NAD-dependent histone deacetylase, silent information regulator Sir2
YP_006020447.1	KEGG: she:Shewmr4_1643 hypothetical protein
YP_006020448.1	KEGG: shw:Sputw3181_1748 hypothetical protein
YP_006020449.1	KEGG: shw:Sputw3181_1749 magnesium and cobalt transport protein CorA; TIGRFAM: Magnesium/cobalt transport protein CorA; PFAM: Mg2+ transporter protein, CorA-like
YP_006020450.1	KEGG: shn:Shewana3_1721 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region
YP_006020451.1	SMART: Prolyl 4-hydroxylase, alpha subunit; KEGG: shn:Shewana3_1722 prolyl 4-hydroxylase, alpha subunit
YP_006020452.1	KEGG: son:SO_1945 sensor protein PhoQ; PFAM: ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like
YP_006020453.1	KEGG: shw:Sputw3181_1753 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal
YP_006020454.1	KEGG: shw:Sputw3181_1754 hypothetical protein
YP_006020455.1	PFAM: Sodium:dicarboxylate symporter; KEGG: shm:Shewmr7_1657 sodium:dicarboxylate symporter
YP_006020456.1	KEGG: sfr:Sfri_2480 Ig domain-containing protein; PFAM: Bacterial Ig-like, group 1; SMART: Bacterial Ig-like, group 1
YP_006020457.1	PFAM: Succinylarginine dihydrolase; TIGRFAM: Succinylarginine dihydrolase; HAMAP: N-succinylarginine dihydrolase; KEGG: shw:Sputw3181_1757 succinylarginine dihydrolase
YP_006020458.1	SMART: DNA topoisomerase, type IA, DNA-binding; DNA topoisomerase, type IA, domain 2; Toprim domain, subgroup; TIGRFAM: DNA topoisomerase I, bacterial-type; KEGG: spc:Sputcn32_2250 DNA topoisomerase I; PFAM: DNA topoisomerase, type IA, central; Toprim domain; DNA topoisomerase, type IA, zn finger; DNA topoisomerase I, zinc ribbon-like, bacterial-type
YP_006020459.1	KEGG: shw:Sputw3181_1759 hypothetical protein
YP_006020460.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: son:SO_2649 transcriptional regulator CysB
YP_006020461.1	KEGG: son:SO_2648 LuxR family DNA-binding response regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region
YP_006020462.1	PFAM: Thioesterase superfamily; KEGG: shn:Shewana3_1733 thioesterase superfamily protein
YP_006020463.1	PFAM: Glycoside hydrolase, family 18, catalytic domain; Carbohydrate-binding domain, family 5/12; Chitinase, C-terminal; KEGG: swd:Swoo_2719 glycoside hydrolase family protein; SMART: Chitinase II; Carbohydrate-binding domain, family 5/12
YP_006020464.1	TIGRFAM: DHAP synthase, class 1; KEGG: shn:Shewana3_1734 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA
YP_006020465.1	KEGG: shw:Sputw3181_1764 hypothetical protein; HAMAP: Protein of unknown function DUF299, phosphotransferase, predicted; PFAM: Protein of unknown function DUF299, phosphotransferase, predicted
YP_006020466.1	TIGRFAM: Phosphoenolpyruvate synthase; KEGG: shw:Sputw3181_1765 phosphoenolpyruvate synthase; PFAM: Pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising enzyme, mobile region; PEP-utilising enzyme
YP_006020467.1	KEGG: shw:Sputw3181_1766 FAD linked oxidase domain-containing protein; PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal
YP_006020468.1	PFAM: Protein of unknown function DUF1285; KEGG: shw:Sputw3181_1768 hypothetical protein
YP_006020469.1	KEGG: shw:Sputw3181_1769 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR
YP_006020470.1	KEGG: shw:Sputw3181_1770 hypothetical protein
YP_006020471.1	KEGG: shw:Sputw3181_1771 Glu/Leu/Phe/Val dehydrogenase, dimerisation region; PFAM: Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation region; Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal
YP_006020472.1	KEGG: shw:Sputw3181_1772 hypothetical protein
YP_006020473.1	KEGG: spc:Sputcn32_2236 cupin 4 family protein; PFAM: Cupin 4; SMART: Transcription factor jumonji/aspartyl beta-hydroxylase
YP_006020474.1	TIGRFAM: Adenylosuccinate lyase; KEGG: shw:Sputw3181_1774 adenylosuccinate lyase; PFAM: Adenylosuccinate lyase C-terminal; Fumarate lyase
YP_006020475.1	KEGG: shw:Sputw3181_1775 hypothetical protein; HAMAP: Uncharacterised protein family UPF0274; PFAM: Uncharacterised protein family UPF0274
YP_006020476.1	TIGRFAM: tRNA-specific 2-thiouridylase; HAMAP: tRNA-specific 2-thiouridylase; KEGG: spc:Sputcn32_2233 tRNA-specific 2-thiouridylase MnmA; PFAM: tRNA methyl transferase-like
YP_006020477.1	PFAM: NUDIX hydrolase domain; KEGG: shw:Sputw3181_1777 NUDIX hydrolase
YP_006020478.1	KEGG: shw:Sputw3181_1778 pseudouridylate synthase; TIGRFAM: Pseudouridine synthase, RsuA and RluB/E/F; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F
YP_006020479.1	TIGRFAM: Isocitrate dehydrogenase NADP-dependent, monomeric type; KEGG: shw:Sputw3181_1779 isocitrate dehydrogenase, NADP-dependent; PFAM: Isocitrate dehydrogenase NADP-dependent, monomeric type
YP_006020480.1	TIGRFAM: CspD, cold shock; PFAM: Cold-shock protein, DNA-binding; KEGG: shn:Shewana3_1751 cold-shock DNA-binding protein family protein; SMART: Cold shock protein
YP_006020481.1	KEGG: shw:Sputw3181_1781 ATP-dependent Clp protease adaptor protein ClpS; HAMAP: ATP-dependent Clp protease adapter protein clpS; PFAM: Adaptor protein ClpS, core
YP_006020482.1	TIGRFAM: ATP-dependent Clp protease ATP-binding subunit clpA; PFAM: ATPase associated with various cellular activities, AAA-2; Clp, N-terminal; ATPase, AAA-type, core; Clp ATPase, C-terminal; KEGG: spc:Sputcn32_2227 ATP-dependent Clp protease, ATP-binding subunit ClpA; SMART: ATPase, AAA+ type, core
YP_006020483.1	TIGRFAM: Translation initiation factor IF-1; HAMAP: Translation initiation factor IF-1; KEGG: shw:Sputw3181_1783 translation initiation factor IF-1; PFAM: S1, IF1 type
YP_006020484.1	KEGG: shn:Shewana3_1755 arginyl-tRNA-protein transferase; HAMAP: Arginine-tRNA-protein transferase, predicted, prokaryotic; PFAM: Arginine-tRNA-protein transferase, C-terminal; Arginine-tRNA-protein transferase, N-terminal
YP_006020485.1	PFAM: Leucyl/phenylalanyl-tRNA-protein transferase; TIGRFAM: Leucyl/phenylalanyl-tRNA-protein transferase; HAMAP: Leucyl/phenylalanyl-tRNA-protein transferase; KEGG: son:SO_2623 leucyl/phenylalanyl-tRNA--protein transferase
YP_006020486.1	PFAM: Rickettsia 17kDa surface antigen; KEGG: shw:Sputw3181_1786 17 kDa surface antigen
YP_006020487.1	KEGG: shw:Sputw3181_1787 hypothetical protein; TIGRFAM: NGG1p interacting factor 3, NIF3; PFAM: NGG1p interacting factor 3, NIF3
YP_006020488.1	PFAM: Auxin efflux carrier; KEGG: shw:Sputw3181_1788 auxin efflux carrier
YP_006020489.1	PFAM: Aminoacyl-tRNA synthetase, class I (M); tRNA-binding region; TIGRFAM: Methionyl-tRNA synthetase, class Ia; Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal; HAMAP: Methionyl-tRNA synthetase; KEGG: shw:Sputw3181_1789 methionyl-tRNA synthetase
YP_006020490.1	PFAM: ATPase-like, ParA/MinD; KEGG: spc:Sputcn32_2219 ATP-binding Mrp/Nbp35 family protein
YP_006020491.1	PFAM: Phosphoribulokinase/uridine kinase; TIGRFAM: Uridine kinase; HAMAP: Uridine kinase; KEGG: shw:Sputw3181_1791 uridine kinase
YP_006020492.1	TIGRFAM: Deoxycytidine triphosphate deaminase; HAMAP: Deoxycytidine triphosphate deaminase; KEGG: shw:Sputw3181_1792 deoxycytidine triphosphate deaminase; PFAM: DeoxyUTP pyrophosphatase domain
YP_006020493.1	TIGRFAM: Aminodeoxychorismate lyase, class IV; KEGG: shn:Shewana3_1764 aminodeoxychorismate lyase apoprotein; PFAM: Aminotransferase, class IV
YP_006020494.1	KEGG: shw:Sputw3181_1794 aminodeoxychorismate lyase; TIGRFAM: Uncharacterised protein family YceG-like; PFAM: Uncharacterised protein family YceG-like
YP_006020495.1	PFAM: Thymidylate kinase-like; TIGRFAM: Thymidylate kinase; HAMAP: Thymidylate kinase; KEGG: shw:Sputw3181_1795 thymidylate kinase
YP_006020496.1	TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: shw:Sputw3181_1796 DNA polymerase III, delta prime subunit
YP_006020497.1	PFAM: Type IV pilus assembly PilZ; KEGG: shw:Sputw3181_1797 type IV pilus biogenesis protein PilZ
YP_006020498.1	KEGG: shw:Sputw3181_1798 TatD family hydrolase; TIGRFAM: Deoxyribonuclease, TatD Mg-dependent, prokaryote; PFAM: Deoxyribonuclease, TatD-related
YP_006020499.1	TIGRFAM: Nop2p; HAMAP: Ribosomal RNA small subunit methyltransferase F; KEGG: shw:Sputw3181_1799 rRNA (cytosine-C(5)-)-methyltransferase RsmF; PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p
YP_006020500.1	PFAM: Nucleoside recognition; KEGG: shw:Sputw3181_1800 nucleoside recognition domain-containing protein
YP_006020501.1	PFAM: Mammalian cell entry related; KEGG: shw:Sputw3181_1801 hypothetical protein
YP_006020502.1	PFAM: Paraquat-inducible protein A; KEGG: shn:Shewana3_1773 paraquat-inducible protein A
YP_006020503.1	PFAM: Paraquat-inducible protein A; KEGG: shw:Sputw3181_1803 paraquat-inducible protein A
YP_006020504.1	PFAM: YebG; KEGG: shw:Sputw3181_1804 YebG family protein
YP_006020505.1	PFAM: GAF; KEGG: shw:Sputw3181_1805 putative GAF sensor protein
YP_006020506.1	PFAM: Fertility inhibition FinO-like; KEGG: shw:Sputw3181_1806 putative solute/DNA competence effector
YP_006020507.1	SMART: Peptidase S41; PDZ/DHR/GLGF; TIGRFAM: Peptidase S41A, C-terminal protease; KEGG: shn:Shewana3_1778 carboxy-terminal protease; PFAM: Peptidase S41; PDZ/DHR/GLGF
YP_006020508.1	KEGG: spc:Sputcn32_2201 aminopeptidase N; TIGRFAM: Peptidase M1, alanyl aminopeptidase; PFAM: Peptidase M1, membrane alanine aminopeptidase, N-terminal
YP_006020509.1	KEGG: son:SO_2598 hypothetical protein
YP_006020510.1	PFAM: Protein of unknown function DUF1302; KEGG: spc:Sputcn32_2199 hypothetical protein
YP_006020511.1	PFAM: Protein of unknown function DUF1329; KEGG: she:Shewmr4_1677 hypothetical protein
YP_006020512.1	KEGG: shw:Sputw3181_1812 BNR repeat-containing protein
YP_006020513.1	KEGG: shw:Sputw3181_1813 hypothetical protein
YP_006020514.1	PFAM: Bacterial NAD-glutamate dehydrogenase; KEGG: shw:Sputw3181_1814 NAD-glutamate dehydrogenase
YP_006020515.1	PFAM: Dihydroorotate dehydrogenase, class 1/ 2; TIGRFAM: Dihydroorotate dehydrogenase, class 2; HAMAP: Dihydroorotate dehydrogenase; KEGG: shw:Sputw3181_1815 dihydroorotate dehydrogenase 2
YP_006020516.1	PFAM: Protein of unknown function DUF1379; KEGG: shw:Sputw3181_1816 hypothetical protein
YP_006020517.1	KEGG: azl:AZL_005550 hypothetical protein
YP_006020518.1	PFAM: Uncharacterised conserved protein UCP025560; KEGG: shw:Sputw3181_1820 hypothetical protein
YP_006020519.1	KEGG: spc:Sputcn32_2188 hypothetical protein
YP_006020520.1	KEGG: spc:Sputcn32_2187 hypothetical protein
YP_006020521.1	KEGG: shw:Sputw3181_1823 aromatic amino acid transporter; TIGRFAM: Tryptophan/tyrosine transporter; PFAM: Tryptophan/tyrosine permease
YP_006020522.1	TIGRFAM: Phosphoribosyl-ATP pyrophosphohydrolase; HAMAP: Histidine biosynthesis bifunctional protein hisIE; KEGG: shw:Sputw3181_1824 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein; PFAM: Phosphoribosyl-AMP cyclohydrolase; Phosphoribosyl-ATP pyrophosphohydrolase
YP_006020523.1	TIGRFAM: Histidine biosynthesis, HisF; HAMAP: Imidazole glycerol phosphate synthase subunit hisF; KEGG: shw:Sputw3181_1825 imidazole glycerol phosphate synthase subunit HisF; PFAM: Histidine biosynthesis
YP_006020524.1	PFAM: Histidine biosynthesis; TIGRFAM: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; HAMAP: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; KEGG: shw:Sputw3181_1826 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
YP_006020525.1	TIGRFAM: Imidazole glycerol phosphate synthase, subunit H; HAMAP: Imidazole glycerol phosphate synthase, subunit H; KEGG: spc:Sputcn32_2182 imidazole glycerol phosphate synthase subunit HisH; PFAM: Glutamine amidotransferase class-I, C-terminal
YP_006020526.1	PFAM: Imidazoleglycerol-phosphate dehydratase; TIGRFAM: Histidinol-phosphatase; Histidinol-phosphate phosphatase; HAD-superfamily hydrolase, subfamily IIIA; HAMAP: Imidazoleglycerol-phosphate dehydratase; Histidine biosynthesis bifunctional protein hisB; KEGG: spc:Sputcn32_2181 imidazole glycerol-phosphate dehydratase/histidinol phosphatase
YP_006020527.1	TIGRFAM: Histidinol-phosphate aminotransferase; KEGG: shw:Sputw3181_1829 histidinol-phosphate aminotransferase; PFAM: Aminotransferase, class I/II
YP_006020528.1	PFAM: Histidinol dehydrogenase, prokaryotic-type; TIGRFAM: Histidinol dehydrogenase, prokaryotic-type; HAMAP: Histidinol dehydrogenase, prokaryotic-type; KEGG: spc:Sputcn32_2179 histidinol dehydrogenase
YP_006020529.1	PFAM: ATP phosphoribosyltransferase, catalytic region; Histidine biosynthesis HisG, C-terminal; TIGRFAM: ATP phosphoribosyltransferase, catalytic region; Histidine biosynthesis HisG, C-terminal; HAMAP: Histidine biosynthesis HisG, ATP phosphoribosyltransferase, subgroup; KEGG: shw:Sputw3181_1831 ATP phosphoribosyltransferase
YP_006020530.1	SMART: Helicase, ATP-dependent, c2 type; KEGG: shw:Sputw3181_2185 helicase C2
YP_006020531.1	PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: shn:Shewana3_1861 TonB-dependent receptor
YP_006020533.1	KEGG: sdn:Sden_2845 hypothetical protein
YP_006020534.1	PFAM: Protein of unknown function DUF938; KEGG: shw:Sputw3181_1832 hypothetical protein
YP_006020535.1	PFAM: FAD dependent oxidoreductase; KEGG: shw:Sputw3181_1833 FAD dependent oxidoreductase
YP_006020536.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: shw:Sputw3181_1834 LysR family transcriptional regulator
YP_006020537.1	KEGG: spc:Sputcn32_2174 alcohol dehydrogenase; TIGRFAM: Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like
YP_006020538.1	TIGRFAM: S-formylglutathione hydrolase; KEGG: shw:Sputw3181_1836 carboxylesterase; PFAM: Putative esterase
YP_006020539.1	TIGRFAM: Iron-sulphur-dependent L-serine dehydratase single chain form; KEGG: shw:Sputw3181_1837 L-serine dehydratase 1; PFAM: Serine dehydratase alpha chain; Serine dehydratase beta chain
YP_006020540.1	PFAM: Glycoside hydrolase, family 3, N-terminal; KEGG: she:Shewmr4_1726 beta-hexosaminidase
YP_006020541.1	PFAM: Uncharacterised protein family UPF0227; KEGG: shw:Sputw3181_1840 hypothetical protein
YP_006020542.1	manually curated
YP_006020543.1	KEGG: shn:Shewana3_3200 hypothetical protein
YP_006020544.1	KEGG: shn:Shewana3_4168 hypothetical protein
YP_006020547.1	KEGG: spc:Sputcn32_2162 hypothetical protein
YP_006020548.1	PFAM: MORN variant; KEGG: shw:Sputw3181_1849 hypothetical protein
YP_006020549.1	KEGG: bal:BACI_c51970 spermidine synthase
YP_006020550.1	KEGG: shw:Sputw3181_1851 acylphosphatase; HAMAP: Acylphosphatase; PFAM: Acylphosphatase-like
YP_006020551.1	KEGG: shw:Sputw3181_1852 hypothetical protein
YP_006020552.1	TIGRFAM: Transcription-repair coupling factor; PFAM: Transcription-repair-coupling factor; Transcription factor CarD; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; KEGG: spc:Sputcn32_2158 transcription-repair coupling factor; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal
YP_006020553.1	KEGG: son:SO_2256 hypothetical protein
YP_006020554.1	KEGG: shw:Sputw3181_1855 LolC/E family lipoprotein releasing system, transmembrane protein; TIGRFAM: Lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: Protein of unknown function DUF214, permase predicted
YP_006020555.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Lipoprotein releasing system, ATP-binding protein; KEGG: spc:Sputcn32_2155 lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter-like
YP_006020556.1	KEGG: shw:Sputw3181_1857 LolC/E family lipoprotein releasing system, transmembrane protein; TIGRFAM: Lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: Protein of unknown function DUF214, permase predicted
YP_006020557.1	KEGG: shw:Sputw3181_1858 inositol-phosphate phosphatase; PFAM: Inositol monophosphatase
YP_006020558.1	KEGG: shw:Sputw3181_1859 RNA methyltransferase; TIGRFAM: RNA methyltransferase TrmH, group 1; PFAM: tRNA/rRNA methyltransferase, SpoU
YP_006020559.1	KEGG: shw:Sputw3181_1860 serine O-acetyltransferase; TIGRFAM: Serine O-acetyltransferase
YP_006020560.1	KEGG: shn:Shewana3_2281 BadM/Rrf2 family transcriptional regulator; TIGRFAM: ISC system FeS cluster assembly, IscR transcription factor; Transcriptional regulator, Rrf2; PFAM: Transcriptional regulator, Rrf2
YP_006020561.1	PFAM: Aminotransferase, class V/Cysteine desulfurase; TIGRFAM: Cysteine desulfurase; HAMAP: Cysteine desulfurase; KEGG: shw:Sputw3181_1862 cysteine desulfurase
YP_006020562.1	KEGG: shn:Shewana3_2279 scaffold protein; TIGRFAM: ISC system FeS cluster assembly, IscU scaffold; PFAM: NIF system FeS cluster assembly, NifU, N-terminal
YP_006020563.1	KEGG: shw:Sputw3181_1864 iron-sulfur cluster assembly protein IscA; TIGRFAM: ISC system FeS cluster assembly, IscA scaffold; FeS cluster insertion; PFAM: FeS cluster biogenesis
YP_006020564.1	SMART: Heat shock protein DnaJ, N-terminal; TIGRFAM: Co-chaperone Hsc20; KEGG: she:Shewmr4_1742 co-chaperone HscB; HAMAP: Co-chaperone protein hscB; PFAM: Heat shock cognate protein B, C-terminal oligomerisation; Heat shock protein DnaJ, N-terminal
YP_006020565.1	TIGRFAM: ISC system FeS cluster assembly, HscA chaperone; HAMAP: ISC system FeS cluster assembly, HscA chaperone; KEGG: shw:Sputw3181_1866 chaperone protein HscA; PFAM: Heat shock protein 70
YP_006020566.1	KEGG: shw:Sputw3181_1867 ferredoxin, 2Fe-2S type, ISC system; TIGRFAM: Ferredoxin, 2Fe-2S type; PFAM: Ferredoxin
YP_006020567.1	TIGRFAM: S6 modification enzyme RimK; HAMAP: Ribosomal protein S6 modification protein; KEGG: shw:Sputw3181_1868 alpha-L-glutamate ligase; PFAM: ATP-grasp fold, RimK-type
YP_006020568.1	KEGG: shn:Shewana3_2273 hypothetical protein; TIGRFAM: ISC system FeS cluster assembly, IscX; PFAM: ISC system FeS cluster assembly, IscX
YP_006020569.1	KEGG: swp:swp_1703 hypothetical protein
YP_006020570.1	SMART: Nucleoside diphosphate kinase, core; HAMAP: Nucleoside diphosphate kinase; KEGG: shw:Sputw3181_1870 nucleoside diphosphate kinase; PFAM: Nucleoside diphosphate kinase, core
YP_006020571.1	PFAM: Heat shock protein Hsp20; KEGG: son:SO_2277 16 kDa heat shock protein A
YP_006020572.1	KEGG: shw:Sputw3181_1872 acetolactate synthase 3 regulatory subunit; TIGRFAM: Acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit, C-terminal; Amino acid-binding ACT
YP_006020573.1	TIGRFAM: Acetolactate synthase, large subunit, biosynthetic; KEGG: spc:Sputcn32_2138 acetolactate synthase 3 catalytic subunit; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding region; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Thiamine pyrophosphate enzyme, central region
YP_006020574.1	KEGG: shw:Sputw3181_1875 Bcr/CflA subfamily drug resistance transporter; TIGRFAM: Drug resistance transporter Bcr/CflA subfamily; PFAM: Major facilitator superfamily MFS-1
YP_006020575.1	KEGG: shw:Sputw3181_1876 alkaline phosphatase
YP_006020576.1	KEGG: shn:Shewana3_2266 GntR family transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; Aminotransferase, class I/II; SMART: HTH transcriptional regulator, GntR
YP_006020577.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: shn:Shewana3_2265 lysine exporter protein LysE/YggA
YP_006020578.1	PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS; KEGG: shw:Sputw3181_1879 sulphate transporter
YP_006020579.1	KEGG: shw:Sputw3181_1880 hypothetical protein
YP_006020580.1	PFAM: Glutathione S-transferase, C-terminal; Glutathione S-transferase, N-terminal; KEGG: shn:Shewana3_2262 glutathione S-transferase domain-containing protein
YP_006020581.1	KEGG: shw:Sputw3181_1881 hypothetical protein; PFAM: Rhodanese-like; SMART: Rhodanese-like
YP_006020582.1	KEGG: shw:Sputw3181_1882 hypothetical protein
YP_006020583.1	KEGG: shw:Sputw3181_1883 hypothetical protein
YP_006020584.1	PFAM: Acylneuraminate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; HAMAP: 3-deoxy-D-manno-octulosonate cytidylyltransferase; KEGG: son:SO_2478 3-deoxy-manno-octulosonate cytidylyltransferase
YP_006020585.1	PFAM: Alcohol dehydrogenase, iron-type; KEGG: she:Shewmr4_1852 iron-containing alcohol dehydrogenase
YP_006020586.1	KEGG: shn:Shewana3_1908 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase
YP_006020587.1	KEGG: shw:Sputw3181_1885 carbonate dehydratase; PFAM: Carbonic anhydrase
YP_006020588.1	KEGG: saz:Sama_1643 hypothetical protein
YP_006020589.1	KEGG: sfr:Sfri_4014 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911
YP_006020590.1	PFAM: Alpha/beta hydrolase fold-1; KEGG: spc:Sputcn32_2125 alpha/beta hydrolase fold
YP_006020591.1	PFAM: Peptidase M15B/M15C, D,D-carboxypeptidase VanY/endolysins; KEGG: shw:Sputw3181_1887 peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysin
YP_006020592.1	TIGRFAM: Succinyl-diaminopimelate desuccinylase, proteobacteria; HAMAP: Succinyl-diaminopimelate desuccinylase, proteobacteria; KEGG: spc:Sputcn32_2123 succinyl-diaminopimelate desuccinylase; PFAM: Peptidase M20; Peptidase M20, dimerisation
YP_006020593.1	KEGG: son:SO_2470 hypothetical protein; TIGRFAM: Conserved hypothetical protein, ArsC related; PFAM: Arsenate reductase-like
YP_006020595.1	PFAM: Porin, Gram-negative type; KEGG: she:Shewmr4_3663 porin
YP_006020596.1	KEGG: shw:Sputw3181_1890 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; Chemotaxis methyl-accepting receptor, subgroup, N-terminal; Cache; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_006020597.1	PFAM: Major facilitator superfamily MFS-1; KEGG: sfr:Sfri_0854 major facilitator transporter
YP_006020598.1	KEGG: shn:Shewana3_2258 PTS system glucose-specific transporter subunit; TIGRFAM: Phosphotransferase system, sugar-specific permease EIIA 1 domain; PFAM: Phosphotransferase system, sugar-specific permease EIIA 1 domain
YP_006020599.1	TIGRFAM: Phosphoenolpyruvate-protein phosphotransferase; KEGG: she:Shewmr4_1764 phosphoenolpyruvate--protein phosphotransferase; PFAM: PEP-utilising enzyme; PEP-utilising enzyme, mobile region; Phosphotransferase system, PEP-utilising enzyme, N-terminal
YP_006020600.1	KEGG: shm:Shewmr7_1843 HPr family phosphocarrier protein; TIGRFAM: Phosphotransferase system, phosphocarrier HPr protein; PFAM: Phosphotransferase system, phosphocarrier HPr protein
YP_006020601.1	KEGG: shn:Shewana3_2255 hypothetical protein
YP_006020602.1	KEGG: shn:Shewana3_2254 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; Cache, type 2; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_006020603.1	KEGG: shw:Sputw3181_1897 hypothetical protein
YP_006020604.1	KEGG: shm:Shewmr7_1847 LacI family transcription regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI
YP_006020605.1	SMART: Exonuclease; TIGRFAM: DNA polymerase III, epsilon subunit; KEGG: spc:Sputcn32_2114 DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T/DNA polymerase III
YP_006020606.1	KEGG: shw:Sputw3181_2100 cupin 4 family protein; PFAM: Cupin 4; SMART: Transcription factor jumonji/aspartyl beta-hydroxylase
YP_006020607.1	PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: pmr:PMI2484 DNA repair protein
YP_006020608.1	PFAM: Divalent ion symporter; KEGG: shw:Sputw3181_2099 sodium/sulphate symporter
YP_006020609.1	KEGG: spc:Sputcn32_1910 helix-turn-helix domain-containing protein; PFAM: Helix-turn-helix, AraC type; AraC protein, arabinose-binding/dimerisation; SMART: Helix-turn-helix, AraC domain
YP_006020610.1	KEGG: shm:Shewmr7_2109 glucan 1,4-alpha-glucosidase; PFAM: Glucodextranase N; Glycoside hydrolase 15-related
YP_006020611.1	PFAM: Major facilitator superfamily MFS-1; KEGG: son:SO_2458 transporter, putative
YP_006020614.1	KEGG: ttu:TERTU_1449 hypothetical protein
YP_006020615.1	KEGG: sfr:Sfri_2378 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain
YP_006020616.1	KEGG: sfr:Sfri_2377 FHA domain-containing protein; TIGRFAM: Type VI secretion system, FHA domain-containing; PFAM: Forkhead-associated
YP_006020617.1	TIGRFAM: Type VI secretion system, lipoprotein VCA0113; KEGG: sfr:Sfri_2376 hypothetical protein
YP_006020618.1	KEGG: ppr:PBPRA0660 hypothetical protein; TIGRFAM: Protein of unknown function DUF876, bacterial; PFAM: Protein of unknown function DUF876, bacterial
YP_006020619.1	KEGG: sfr:Sfri_2374 OmpA/MotB domain-containing protein; TIGRFAM: Type IV / VI secretion system, DotU; Type VI secretion system, OmpA/MotB; PFAM: Type IV / VI secretion system, DotU; Outer membrane protein, OmpA/MotB, C-terminal
YP_006020620.1	KEGG: ppr:PBPRA0662 hypothetical protein; TIGRFAM: Type VI secretion system, IcmF; PFAM: ImcF-related; Protein of unknown function DUF1215
YP_006020621.1	KEGG: ppr:PBPRA0663 hypothetical protein; TIGRFAM: Type VI secretion system-associated, BMAA0400; PFAM: Type VI secretion system-associated, BMAA0400
YP_006020622.1	KEGG: sfr:Sfri_2371 protein serine/threonine phosphatase; PFAM: Protein phosphatase 2C, N-terminal; SMART: Protein phosphatase 2C-related
YP_006020623.1	KEGG: ppr:PBPRA0665 hypothetical protein; TIGRFAM: Type VI secretion system-associated, ImpA; PFAM: ImpA, N-terminal
YP_006020624.1	KEGG: vpa:VPA1035 hypothetical protein; TIGRFAM: Uncharacterised conserved protein UCP028301; PFAM: Uncharacterised conserved protein UCP028301
YP_006020625.1	KEGG: vex:VEA_000021 uncharacterized protein ImpC; TIGRFAM: Protein of unknown function DUF877; PFAM: Protein of unknown function DUF877
YP_006020626.1	KEGG: sfr:Sfri_2367 hypothetical protein; TIGRFAM: Protein of unknown function DUF877; PFAM: Protein of unknown function DUF877
YP_006020627.1	PFAM: virulence protein, SciE type; KEGG: sfr:Sfri_2366 virulence protein, SciE type
YP_006020628.1	KEGG: sfr:Sfri_2365 hypothetical protein; TIGRFAM: Type VI secretion system, lysozyme-related; PFAM: GPW/gp25
YP_006020629.1	KEGG: sfr:Sfri_2364 hypothetical protein; TIGRFAM: Type VI secretion system, VCA0110; PFAM: Type VI secretion system, VCA0110
YP_006020630.1	KEGG: sfr:Sfri_2363 hypothetical protein; TIGRFAM: Protein of unknown function DUF1305; PFAM: Protein of unknown function DUF1305
YP_006020631.1	TIGRFAM: ATPase, type VI secretion system, ClpV1; PFAM: ATPase associated with various cellular activities, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; KEGG: psm:PSM_B0219 ATPase; SMART: ATPase, AAA+ type, core
YP_006020632.1	PFAM: Virulence factor, secretion apparatus; KEGG: sfr:Sfri_2361 hypothetical protein
YP_006020633.1	KEGG: psm:PSM_B0221 rhs element Vgr protein; TIGRFAM: Rhs element Vgr protein, subgroup; Rhs element Vgr protein; PFAM: Rhs element Vgr protein
YP_006020634.1	PFAM: PAAR motif; KEGG: vpa:VPA1025 hypothetical protein
YP_006020636.1	KEGG: sfr:Sfri_2356 hypothetical protein
YP_006020637.1	KEGG: ppr:PBPRA0678 nucleotidyltransferase; TIGRFAM: RHS repeat-associated core domain; YD repeat; PFAM: RHS protein; YD repeat
YP_006020639.1	KEGG: ppr:PBPRA0678 nucleotidyltransferase; TIGRFAM: RHS repeat-associated core domain; YD repeat; PFAM: RHS protein; YD repeat
YP_006020641.1	KEGG: pmu:PM1462 hypothetical protein
YP_006020642.1	KEGG: ppr:PBPRA0678 nucleotidyltransferase; TIGRFAM: YD repeat; PFAM: RHS protein; YD repeat
YP_006020643.1	PFAM: Lipase, class 3; KEGG: psm:PSM_B0235 predicted lipase
YP_006020644.1	KEGG: sfr:Sfri_3131 hypothetical protein
YP_006020645.1	PFAM: YCII-related; KEGG: shw:Sputw3181_2097 YCII-related protein
YP_006020646.1	KEGG: shw:Sputw3181_2096 hypothetical protein
YP_006020647.1	KEGG: spc:Sputcn32_1913 alkylhydroperoxidase; TIGRFAM: Alkylhydroperoxidase AhpD core; PFAM: Carboxymuconolactone decarboxylase
YP_006020648.1	KEGG: shw:Sputw3181_2094 helix-turn-helix domain-containing protein; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_006020649.1	PFAM: Glycoside hydrolase 97; KEGG: son:SO_2450 alpha-glucosidase
YP_006020650.1	KEGG: spc:Sputcn32_1916 hypothetical protein
YP_006020651.1	PFAM: NUDIX hydrolase domain; KEGG: shw:Sputw3181_2090 NUDIX hydrolase
YP_006020652.1	PFAM: DTW; KEGG: shw:Sputw3181_2089 DTW domain-containing protein
YP_006020653.1	KEGG: spc:Sputcn32_1920 hemolysin III family channel protein; TIGRFAM: HylII; PFAM: Hly-III related
YP_006020654.1	KEGG: shw:Sputw3181_2087 hypothetical protein
YP_006020655.1	TIGRFAM: Thiamine biosynthesis protein ThiC; HAMAP: Thiamine biosynthesis protein ThiC; KEGG: spc:Sputcn32_1922 thiamine biosynthesis protein ThiC; PFAM: Thiamine biosynthesis protein ThiC
YP_006020656.1	PFAM: Thiamine monophosphate synthase; Phosphomethylpyrimidine kinase type-1; TIGRFAM: Thiamine monophosphate synthase; HAMAP: Thiamine-phosphate pyrophosphorylase; KEGG: spc:Sputcn32_1923 thiamine-phosphate pyrophosphorylase
YP_006020657.1	PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB; KEGG: shw:Sputw3181_2084 UBA/ThiF-type NAD/FAD binding protein
YP_006020658.1	KEGG: spc:Sputcn32_1925 thiamine biosynthesis protein ThiS; TIGRFAM: ThiS, thiamine-biosynthesis; PFAM: ThiamineS
YP_006020659.1	KEGG: spc:Sputcn32_1926 thiazole synthase; HAMAP: Thiazole biosynthesis; PFAM: Thiazole biosynthesis
YP_006020660.1	KEGG: spc:Sputcn32_1927 thiamine biosynthesis protein ThiH; TIGRFAM: Thiazole biosynthesis ThiH; PFAM: Biotin/thiamin synthesis-associated protein; Radical SAM
YP_006020661.1	KEGG: shm:Shewmr7_2091 methyl-accepting chemotaxis protein
YP_006020662.1	KEGG: shn:Shewana3_1943 protein-glutamate O-methyltransferase
YP_006020663.1	PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: shw:Sputw3181_2078 LysR family transcriptional regulator
YP_006020664.1	PFAM: Peptidase M3A/M3B, thimet/oligopeptidase F; KEGG: shn:Shewana3_1946 response regulator receiver protein
YP_006020665.1	TIGRFAM: Alpha-L-glutamate ligase-related protein; KEGG: she:Shewmr4_1892 alpha-L-glutamate ligase-like protein
YP_006020666.1	KEGG: shm:Shewmr7_2085 gonadoliberin III-related protein
YP_006020667.1	PFAM: Protein of unknown function DUF785; KEGG: shn:Shewana3_1949 hypothetical protein
YP_006020668.1	TIGRFAM: tRNA (mo5U34)-methyltransferase; HAMAP: tRNA (mo5U34)-methyltransferase; KEGG: spc:Sputcn32_1932 putative methyltransferase; PFAM: tRNA (mo5U34)-methyltransferase
YP_006020669.1	TIGRFAM: tRNA (cmo5U34)-methyltransferase; HAMAP: tRNA (cmo5U34)-methyltransferase; KEGG: spc:Sputcn32_1933 putative methyltransferase; PFAM: Methyltransferase type 11
YP_006020670.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; Extracellular solute-binding protein, family 3; KEGG: spc:Sputcn32_1934 diguanylate cyclase; SMART: Diguanylate cyclase, predicted; Extracellular solute-binding protein, family 3
YP_006020671.1	TIGRFAM: Aspartyl-tRNA synthetase, class IIb, bacterial/mitochondrial type; KEGG: shw:Sputw3181_2073 aspartyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); GAD domain; Nucleic acid binding, OB-fold, tRNA/helicase-type
YP_006020672.1	TIGRFAM: Protein of unknown function DUF28; HAMAP: Protein of unknown function DUF28; KEGG: spc:Sputcn32_1936 hypothetical protein; PFAM: Protein of unknown function DUF28
YP_006020673.1	PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: Crossover junction endodeoxyribonuclease RuvC; HAMAP: Crossover junction endodeoxyribonuclease RuvC; KEGG: shw:Sputw3181_2071 Holliday junction resolvase
YP_006020674.1	TIGRFAM: Bacterial DNA recombination protein RuvA; HAMAP: Holliday junction ATP-dependent DNA helicase ruvA; KEGG: shw:Sputw3181_2070 Holliday junction DNA helicase RuvA; PFAM: DNA helicase, Holliday junction RuvA type, domain I, bacterial; DNA helicase, Holliday junction RuvA type, domain III, C-terminal
YP_006020675.1	TIGRFAM: DNA helicase, Holliday junction RuvB type; PFAM: DNA helicase, Holliday junction RuvB type, C-terminal; ATPase, AAA-type, core; DNA helicase, Holliday junction RuvB type, N-terminal; KEGG: shw:Sputw3181_2069 Holliday junction DNA helicase RuvB; SMART: ATPase, AAA+ type, core
YP_006020676.1	PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: spc:Sputcn32_1940 TonB-dependent receptor
YP_006020677.1	KEGG: shw:Sputw3181_2064 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region
YP_006020678.1	KEGG: shn:Shewana3_1960 peptidase M14, carboxypeptidase A; PFAM: Peptidase M14, carboxypeptidase A; SMART: Peptidase M14, carboxypeptidase A
YP_006020679.1	KEGG: shw:Sputw3181_2062 hypothetical protein
YP_006020680.1	PFAM: Protein of unknown function DUF1315; KEGG: shw:Sputw3181_2061 hypothetical protein
YP_006020681.1	TIGRFAM: L-asparaginase, type I; KEGG: shw:Sputw3181_1933 cytoplasmic asparaginase I; PFAM: Asparaginase/glutaminase
YP_006020682.1	KEGG: shw:Sputw3181_1934 signal peptide peptidase SppA, 67K type; TIGRFAM: Peptidase S49, protease IV; Peptidase S49, SppA; PFAM: Peptidase S49
YP_006020683.1	KEGG: she:Shewmr4_1910 2,4-dienoyl-CoA reductase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal; FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_006020684.1	PFAM: Ferredoxin; KEGG: shn:Shewana3_1967 ferredoxin
YP_006020685.1	KEGG: shw:Sputw3181_1938 ribonucleotide-diphosphate reductase subunit beta; PFAM: Ribonucleotide reductase
YP_006020686.1	KEGG: spc:Sputcn32_2073 ribonucleotide-diphosphate reductase subunit alpha; TIGRFAM: Ribonucleoside-diphosphate reductase, alpha subunit; PFAM: Ribonucleotide reductase large subunit, C-terminal; Ribonucleotide reductase large subunit, N-terminal; ATP-cone
YP_006020687.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; KEGG: shw:Sputw3181_1940 HAD family hydrolase; PFAM: Haloacid dehalogenase-like hydrolase
YP_006020688.1	PFAM: Methyltransferase type 11; TIGRFAM: Ubiquinone biosynthesis O-methyltransferase; HAMAP: 3-demethylubiquinone-9 3-methyltransferase; KEGG: spc:Sputcn32_2071 3-demethylubiquinone-9 3-methyltransferase
YP_006020689.1	SMART: DNA topoisomerase, type IIA, subunit A or C-terminal; TIGRFAM: DNA gyrase, subunit A; KEGG: shw:Sputw3181_1942 DNA gyrase, A subunit; PFAM: DNA topoisomerase, type IIA, subunit A or C-terminal; DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel
YP_006020690.1	PFAM: Aminotransferase, class V/Cysteine desulfurase; TIGRFAM: Phosphoserine aminotransferase; HAMAP: Phosphoserine aminotransferase; KEGG: shw:Sputw3181_1943 phosphoserine aminotransferase
YP_006020692.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: son:SO_2409 LysR family transcriptional regulator
YP_006020693.1	PFAM: Radical SAM; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: son:SO_2408 radical activating enzyme
YP_006020694.1	KEGG: son:SO_2407 hypothetical protein
YP_006020695.1	KEGG: shw:Sputw3181_1967 aromatic amino acid aminotransferase; PFAM: Aminotransferase, class I/II
YP_006020696.1	PFAM: 3-phosphoshikimate 1-carboxyvinyltransferase, core; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase, subgroup; HAMAP: 3-phosphoshikimate 1-carboxyvinyltransferase, subgroup; KEGG: spc:Sputcn32_2044 3-phosphoshikimate 1-carboxyvinyltransferase
YP_006020697.1	PFAM: Cytidylate kinase region; TIGRFAM: Cytidylate kinase; HAMAP: Cytidylate kinase; KEGG: spc:Sputcn32_2043 cytidylate kinase
YP_006020698.1	KEGG: shn:Shewana3_1977 30S ribosomal protein S1; TIGRFAM: Ribosomal S1 synthesis/modification protein; PFAM: Ribosomal protein S1, RNA binding domain
YP_006020699.1	SMART: Histone-like bacterial DNA-binding protein; TIGRFAM: Integration host factor, beta subunit; KEGG: shn:Shewana3_1978 integration host factor subunit beta; HAMAP: Integration host factor, beta subunit; PFAM: Histone-like bacterial DNA-binding protein
YP_006020700.1	PFAM: Protein of unknown function DUF1049; KEGG: shw:Sputw3181_1973 hypothetical protein
YP_006020701.1	KEGG: son:SO_2399 tetratricopeptide repeat protein
YP_006020702.1	TIGRFAM: Orotidine 5'-phosphate decarboxylase, subfamily 1, core; KEGG: she:Shewmr4_1928 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase, core
YP_006020703.1	KEGG: shw:Sputw3181_1976 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_006020704.1	PFAM: Protein of unknown function DUF2058; KEGG: shw:Sputw3181_1977 hypothetical protein
YP_006020705.1	KEGG: spc:Sputcn32_2035 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central region; Acyl-CoA dehydrogenase, N-terminal
YP_006020706.1	TIGRFAM: Peptidase S13, D-Ala-D-Ala carboxypeptidase C; KEGG: shw:Sputw3181_1979 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: Peptidase S13, D-Ala-D-Ala carboxypeptidase C
YP_006020707.1	KEGG: shw:Sputw3181_1980 hypothetical protein
YP_006020708.1	PFAM: Protein of unknown function DUF1904; KEGG: shw:Sputw3181_1981 hypothetical protein
YP_006020709.1	PFAM: Phospholipase D/Transphosphatidylase; KEGG: shn:Shewana3_1988 phosphatidylserine synthase; SMART: Phospholipase D/Transphosphatidylase
YP_006020710.1	PFAM: Major facilitator superfamily MFS-1; KEGG: son:SO_2389 multidrug resistance protein D
YP_006020711.1	KEGG: shw:Sputw3181_1984 beta-lactamase; PFAM: Beta-lactamase-related
YP_006020712.1	PFAM: DTW; KEGG: shw:Sputw3181_1985 DTW domain-containing protein
YP_006020713.1	PFAM: Protein of unknown function DUF839, bacterial; Twin-arginine translocation pathway, signal sequence, subgroup; KEGG: shw:Sputw3181_1986 hypothetical protein
YP_006020714.1	PFAM: Integrase, catalytic core, phage; KEGG: shn:Shewana3_1996 phage integrase family protein
YP_006020715.1	KEGG: shn:Shewana3_1997 hypothetical protein
YP_006020716.1	KEGG: shw:Sputw3181_1987 hypothetical protein
YP_006020717.1	TIGRFAM: DNA helicase, ATP-dependent, RecQ type, N-terminal; PFAM: DNA/RNA helicase, C-terminal; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; KEGG: shw:Sputw3181_1988 ATP-dependent DNA helicase RecQ; SMART: DNA/RNA helicase, C-terminal; DEAD-like helicase, N-terminal
YP_006020718.1	KEGG: shw:Sputw3181_1989 hypothetical protein
YP_006020719.1	PFAM: Proteinase inhibitor I11, ecotin; KEGG: shn:Shewana3_2000 ecotin
YP_006020720.1	KEGG: shw:Sputw3181_1912 cation diffusion facilitator family transporter; TIGRFAM: Cation efflux protein; PFAM: Cation efflux protein
YP_006020721.1	KEGG: shw:Sputw3181_1913 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR
YP_006020722.1	KEGG: shw:Sputw3181_1914 prolyl oligopeptidase
YP_006020723.1	PFAM: Protein of unknown function DUF1705; Sulfatase; KEGG: she:Shewmr4_2103 sulfatase
YP_006020724.1	SMART: Diguanylate cyclase, predicted; TIGRFAM: Diguanylate cyclase, predicted; KEGG: shm:Shewmr7_1872 diguanylate cyclase; PFAM: Diguanylate cyclase, predicted
YP_006020725.1	PFAM: CoA-binding; GCN5-related N-acetyltransferase; KEGG: shm:Shewmr7_1876 CoA-binding domain-containing protein
YP_006020726.1	KEGG: son:SO_2117 methyl-accepting chemotaxis protein; PFAM: Chemotaxis methyl-accepting receptor, signalling; SMART: Chemotaxis methyl-accepting receptor, signalling
YP_006020727.1	KEGG: son:SO_2118 SpoIIAA family protein
YP_006020728.1	KEGG: son:SO_2119 response regulator; PFAM: Sporulation stage II, protein E C-terminal; Signal transduction response regulator, receiver region; ATP-binding region, ATPase-like; SMART: Signal transduction response regulator, receiver region; Protein phosphatase 2C-related
YP_006020729.1	KEGG: shm:Shewmr7_1880 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region
YP_006020730.1	KEGG: shn:Shewana3_2218 CheA signal transduction histidine kinases; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, phosphotransfer (Hpt) region; Signal transduction histidine kinase, subgroup, homodimeric; CheW-like protein; SMART: CheW-like protein; Signal transduction histidine kinase, phosphotransfer (Hpt) region; ATP-binding region, ATPase-like
YP_006020731.1	KEGG: shn:Shewana3_2217 CheW protein; PFAM: CheW-like protein; SMART: CheW-like protein
YP_006020732.1	KEGG: shm:Shewmr7_1883 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; PAS fold; SMART: Chemotaxis methyl-accepting receptor, signalling; PAS
YP_006020733.1	PFAM: MCP methyltransferase, CheR-type; KEGG: she:Shewmr4_2090 MCP methyltransferase, CheR-type; SMART: MCP methyltransferase, CheR-type
YP_006020734.1	HAMAP: Chemoreceptor glutamine deamidase cheD; KEGG: she:Shewmr4_2089 chemoreceptor glutamine deamidase CheD; PFAM: Chemoreceptor glutamine deamidase cheD
YP_006020735.1	SMART: Signal transduction response regulator, receiver region; HAMAP: Chemotaxis response regulator protein-glutamate methylesterase; KEGG: shn:Shewana3_2213 response regulator receiver modulated CheB methylesterase; PFAM: Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase; Signal transduction response regulator, receiver region
YP_006020736.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; Signal transduction histidine kinase, phosphotransfer (Hpt) region; Signal transduction response regulator, receiver region; KEGG: shn:Shewana3_2212 response regulator receiver modulated diguanylate cyclase; SMART: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region
YP_006020737.1	PFAM: Methyltransferase type 12; KEGG: sse:Ssed_2265 methyltransferase type 12
YP_006020738.1	SMART: HNH nuclease; KEGG: sse:Ssed_2264 HNH nuclease
YP_006020739.1	PFAM: NERD; KEGG: sfr:Sfri_3140 hypothetical protein
YP_006020740.1	KEGG: shw:Sputw3181_2170 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core
YP_006020741.1	PFAM: Protein of unknown function DUF2132; KEGG: sdn:Sden_1749 hypothetical protein
YP_006020743.1	KEGG: shn:Shewana3_2202 XRE family transcriptional regulator
YP_006020744.1	KEGG: shn:Shewana3_2201 response regulator receiver modulated diguanylate phosphodiesterase; PFAM: Diguanylate phosphodiesterase, predicted; Signal transduction response regulator, receiver region; SMART: Diguanylate phosphodiesterase, predicted; Signal transduction response regulator, receiver region
YP_006020746.1	KEGG: shn:Shewana3_2200 response regulator receiver protein; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region
YP_006020747.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; PAS fold-4; KEGG: sfr:Sfri_0198 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_006020748.1	KEGG: shm:Shewmr7_1896 hypothetical protein
YP_006020749.1	KEGG: shn:Shewana3_2198 hypothetical protein
YP_006020750.1	KEGG: shw:Sputw3181_2168 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug
YP_006020751.1	KEGG: she:Shewmr4_2076 PepSY-associated TM helix domain-containing protein
YP_006020752.1	KEGG: shw:Sputw3181_2166 hypothetical protein
YP_006020753.1	KEGG: shw:Sputw3181_0090 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug
YP_006020754.1	KEGG: ilo:IL1219 hypothetical protein
YP_006020755.1	PFAM: CsbD-like; KEGG: dac:Daci_3473 CsbD family protein
YP_006020756.1	KEGG: meh:M301_0971 hypothetical protein
YP_006020757.1	KEGG: kko:Kkor_0109 hypothetical protein
YP_006020758.1	KEGG: shw:Sputw3181_1991 MATE efflux family protein; TIGRFAM: Multi antimicrobial extrusion protein MatE; PFAM: Multi antimicrobial extrusion protein MatE
YP_006020759.1	TIGRFAM: Lumazine-binding protein; KEGG: shw:Sputw3181_1992 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein
YP_006020760.1	KEGG: shw:Sputw3181_1993 hypothetical protein
YP_006020762.1	KEGG: spc:Sputcn32_2018 threonyl-tRNA synthetase; TIGRFAM: Threonyl-tRNA synthetase, class IIa; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Threonyl/alanyl tRNA synthetase, SAD; TGS; Anticodon-binding
YP_006020763.1	PFAM: Translation initiation factor 3, C-terminal; Translation initiation factor 3, N-terminal; manually curated; TIGRFAM: Translation initiation factor 3; KEGG: swd:Swoo_2490 translation initiation factor IF-3; HAMAP: Translation initiation factor IF-3
YP_006020764.1	TIGRFAM: Ribosomal protein L35; HAMAP: Ribosomal protein L35; KEGG: svo:SVI_2301 50S ribosomal protein L35; PFAM: Ribosomal protein L35
YP_006020765.1	TIGRFAM: Ribosomal protein L20; HAMAP: Ribosomal protein L20; KEGG: shw:Sputw3181_1997 50S ribosomal protein L20; PFAM: Ribosomal protein L20
YP_006020766.1	TIGRFAM: Thioredoxin reductase; KEGG: shw:Sputw3181_1998 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_006020767.1	TIGRFAM: Alanine dehydrogenase/pyridine nucleotide transhydrogenase; KEGG: shw:Sputw3181_1999 alanine dehydrogenase; PFAM: Alanine dehydrogenase/PNT, C-terminal; Alanine dehydrogenase/PNT, N-terminal
YP_006020768.1	KEGG: shw:Sputw3181_2000 leucine-responsive transcriptional regulator; PFAM: Transcription regulator, AsnC-type, C-terminal; SMART: Transcription regulator, AsnC-type
YP_006020769.1	PFAM: Cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; KEGG: spc:Sputcn32_2011 cell divisionFtsK/SpoIIIE
YP_006020770.1	TIGRFAM: Outer membrane lipoprotein carrier protein LolA, Proteobacteria; HAMAP: Outer membrane lipoprotein carrier protein LolA, Proteobacteria; KEGG: shw:Sputw3181_2002 outer membrane lipoprotein carrier protein LolA; PFAM: Outer membrane lipoprotein carrier protein LolA
YP_006020771.1	KEGG: shn:Shewana3_2052 recombination factor protein RarA; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core
YP_006020772.1	TIGRFAM: Camphor resistance CrcB protein; HAMAP: CrcB-like protein; KEGG: shn:Shewana3_2053 camphor resistance protein CrcB; PFAM: Camphor resistance CrcB protein
YP_006020773.1	PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Seryl-tRNA synthetase, class IIa, N-terminal; TIGRFAM: Seryl-tRNA synthetase, class IIa; HAMAP: Seryl-tRNA synthetase; KEGG: shn:Shewana3_2054 seryl-tRNA synthetase
YP_006020774.1	manually curated; KEGG: shn:Shewana3_2055 hypothetical protein
YP_006020775.1	KEGG: shw:Sputw3181_2007 DsrC family protein; TIGRFAM: DsrC-like protein; PFAM: DsrC-like protein
YP_006020776.1	KEGG: shw:Sputw3181_2008 DsrH family protein; TIGRFAM: Sulphur relay, TusB/DsrH; PFAM: Sulphur relay, TusB/DsrH
YP_006020777.1	KEGG: shw:Sputw3181_2009 DsrE family protein; TIGRFAM: Sulphur relay, TusC/DsrF; PFAM: Sulphur relay, DsrE-like protein
YP_006020778.1	KEGG: shw:Sputw3181_2010 DsrE family protein; TIGRFAM: Sulphur relay, TusD/DsrE; PFAM: Sulphur relay, DsrE-like protein
YP_006020779.1	PFAM: Uncharacterised protein family UPF0005; KEGG: shw:Sputw3181_2011 hypothetical protein
YP_006020780.1	KEGG: shw:Sputw3181_2012 putative DNA-binding transcriptional regulator; manually curated; PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR
YP_006020781.1	manually curated; TIGRFAM: Drug resistance transporter Bcr/CflA subfamily; KEGG: shw:Sputw3181_2013 inner membrane transport protein YdhC; PFAM: Major facilitator superfamily MFS-1
YP_006020782.1	KEGG: shn:Shewana3_2063 hypothetical protein
YP_006020783.1	PFAM: Multi antimicrobial extrusion protein MatE; KEGG: bha:BH2163 hypothetical protein
YP_006020784.1	PFAM: Protein of unknown function DUF81; KEGG: shw:Sputw3181_1963 hypothetical protein
YP_006020785.1	KEGG: vfi:VF_1462 hypothetical protein
YP_006020786.1	KEGG: dap:Dacet_2665 hypothetical protein
YP_006020787.1	KEGG: son:SO_A0150 hypothetical protein
YP_006020788.1	KEGG: son:SO_A0149 hypothetical protein
YP_006020789.1	KEGG: swp:swp_3473 histone-like nucleoid-structuring protein H-NS; PFAM: Histone-like nucleoid-structuring protein H-NS; SMART: Histone-like nucleoid-structuring protein H-NS
YP_006020790.1	KEGG: csa:Csal_2377 hypothetical protein
YP_006020791.1	KEGG: swd:Swoo_1065 hypothetical protein
YP_006020792.1	PFAM: Integrase, catalytic core; KEGG: sdn:Sden_2262 integrase catalytic subunit
YP_006020793.1	PFAM: Integrase, catalytic core; KEGG: sdn:Sden_2262 integrase catalytic subunit
YP_006020797.1	KEGG: vpa:VPA0347 hypothetical protein
YP_006020800.1	KEGG: psm:PSM_A2069 TnsA endonuclease N-terminal domain family protein
YP_006020801.1	PFAM: Integrase, catalytic core; KEGG: cps:CPS_1631 hypothetical protein
YP_006020802.1	KEGG: cps:CPS_1630 hypothetical protein
YP_006020803.1	KEGG: cps:CPS_1629 hypothetical protein
YP_006020804.1	PFAM: Integrase, catalytic core, phage; KEGG: shn:Shewana3_2104 phage integrase family protein
YP_006020805.1	KEGG: shm:Shewmr7_1972 hypothetical protein
YP_006020806.1	KEGG: shm:Shewmr7_1971 response regulator receiver modulated metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region
YP_006020807.1	KEGG: shw:Sputw3181_2045 hypothetical protein
YP_006020808.1	TIGRFAM: Cytochrome c oxidase cbb3-type, subunit I; KEGG: shw:Sputw3181_2046 cbb3-type cytochrome c oxidase subunit I; PFAM: Cytochrome c oxidase, subunit I
YP_006020809.1	KEGG: shn:Shewana3_2108 cbb3-type cytochrome c oxidase subunit II; TIGRFAM: Cytochrome C oxidase, monohaem subunit/FixO; PFAM: Cytochrome C oxidase, monohaem subunit/FixO
YP_006020810.1	KEGG: shn:Shewana3_2109 Cbb3-type cytochrome oxidase component
YP_006020811.1	KEGG: son:SO_2361 cytochrome c oxidase, cbb3-type, subunit III; TIGRFAM: Cytochrome c oxidase cbb3-type, subunit III; PFAM: Cytochrome c, class I
YP_006020812.1	PFAM: FixH; KEGG: shw:Sputw3181_2050 hypothetical protein
YP_006020813.1	TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P type, cation/copper-transporter; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: shn:Shewana3_2112 heavy metal translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated region; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase
YP_006020814.1	KEGG: son:SO_2358 cytochrome oxidase maturation protein, cbb3-type; TIGRFAM: Cytochrome oxidase maturation protein cbb3-type; PFAM: Cytochrome oxidase maturation protein cbb3-type
YP_006020815.1	KEGG: shw:Sputw3181_2053 hypothetical protein
YP_006020816.1	KEGG: shw:Sputw3181_2054 fumarate/nitrate reduction transcriptional regulator; PFAM: HTH transcriptional regulator, Crp; Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp
YP_006020817.1	PFAM: UspA; KEGG: shn:Shewana3_2116 universal stress protein UspE
YP_006020818.1	KEGG: shn:Shewana3_2117 C32 tRNA thiolase; HAMAP: tRNA 2-thiocytidine biosynthesis protein TtcA; PFAM: PP-loop
YP_006020819.1	KEGG: shw:Sputw3181_2057 hypothetical protein
YP_006020820.1	KEGG: shm:Shewmr7_1957 bax protein, putative
YP_006020821.1	KEGG: shw:Sputw3181_2059 protein of unknown function UPF0052 and CofD; TIGRFAM: Uncharacterised protein family UPF0052; PFAM: LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052
YP_006020822.1	KEGG: shm:Shewmr7_1955 aromatic amino acid aminotransferase; PFAM: Aminotransferase, class I/II
YP_006020823.1	TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: shw:Sputw3181_2117 glyceraldehyde-3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain
YP_006020824.1	KEGG: she:Shewmr4_2022 hypothetical protein
YP_006020825.1	TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: spc:Sputcn32_1889 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain
YP_006020826.1	PFAM: Quinolinate synthetase A; TIGRFAM: Quinolinate synthetase A; HAMAP: Quinolinate synthase A; KEGG: shw:Sputw3181_2120 quinolinate synthetase
YP_006020827.1	KEGG: spc:Sputcn32_1887 dihydrolipoamide acetyltransferase; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding
YP_006020828.1	KEGG: spc:Sputcn32_1886 transketolase, central region; PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal
YP_006020829.1	KEGG: shw:Sputw3181_2123 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring); PFAM: Dehydrogenase, E1 component
YP_006020830.1	PFAM: Succinylglutamate desuccinylase/aspartoacylase; TIGRFAM: Succinylglutamate desuccinylase; HAMAP: Succinylglutamate desuccinylase; KEGG: shw:Sputw3181_2124 succinylglutamate desuccinylase
YP_006020831.1	PFAM: Peptide methionine sulphoxide reductase MsrA; TIGRFAM: Peptide methionine sulphoxide reductase MsrA; HAMAP: Peptide methionine sulphoxide reductase MsrA; KEGG: spc:Sputcn32_1883 peptide methionine sulfoxide reductase
YP_006020832.1	TIGRFAM: Phosphoglucomutase, alpha-D-glucose specific; KEGG: spc:Sputcn32_1882 phosphoglucomutase; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal
YP_006020833.1	PFAM: Regulation modulator SeqA; KEGG: shm:Shewmr7_1943 replication initiation regulator SeqA
YP_006020834.1	PFAM: Alpha/beta hydrolase fold-1; KEGG: shw:Sputw3181_2128 alpha/beta hydrolase fold
YP_006020835.1	KEGG: shw:Sputw3181_2129 hypothetical protein
YP_006020836.1	PFAM: CopG-like DNA-binding; KEGG: shw:Sputw3181_2130 LexA regulated protein
YP_006020837.1	KEGG: shw:Sputw3181_2131 flavodoxin FldA; TIGRFAM: Flavodoxin, long chain; PFAM: Flavodoxin/nitric oxide synthase
YP_006020838.1	PFAM: Uncharacterised conserved protein UCP015557; KEGG: shw:Sputw3181_2132 hypothetical protein
YP_006020839.1	TIGRFAM: Translation elongation factor P; HAMAP: Translation elongation factor P; KEGG: shw:Sputw3181_2133 elongation factor P; PFAM: Elongation factor P, C-terminal; Translation elongation factor P/YeiP, central; Translation elongation factor, KOW-like
YP_006020840.1	manually curated; KEGG: cvi:CV_4298 glutamine synthetase; PFAM: Glutamine synthetase, catalytic region
YP_006020841.1	PFAM: Na+/H+ antiporter NhaC-like; KEGG: shm:Shewmr7_1936 Na+/H+ antiporter NhaC
YP_006020842.1	KEGG: shw:Sputw3181_2136 aminotransferase AlaT; PFAM: Aminotransferase, class I/II
YP_006020843.1	KEGG: shw:Sputw3181_2137 hypothetical protein; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain
YP_006020844.1	KEGG: shw:Sputw3181_2138 deoxyguanosinetriphosphate triphosphohydrolase-like protein; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; TIGRFAM: Deoxyguanosinetriphosphate triphosphohydrolase; HAMAP: Deoxyguanosinetriphosphate triphosphohydrolase-like protein; SMART: Metal-dependent phosphohydrolase, HD region
YP_006020845.1	TIGRFAM: KDPG/KHG aldolase; KEGG: son:SO_2486 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; PFAM: KDPG/KHG aldolase
YP_006020846.1	TIGRFAM: 6-phosphogluconate dehydratase; KEGG: spc:Sputcn32_1868 phosphogluconate dehydratase; PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase
YP_006020847.1	KEGG: spc:Sputcn32_1867 6-phosphogluconolactonase; TIGRFAM: 6-phosphogluconolactonase
YP_006020848.1	TIGRFAM: Glucose-6-phosphate dehydrogenase; KEGG: shw:Sputw3181_2142 glucose-6-phosphate 1-dehydrogenase; PFAM: Glucose-6-phosphate dehydrogenase
YP_006020849.1	PFAM: Helix-turn-helix protein RpiR; Sugar isomerase (SIS); KEGG: shw:Sputw3181_2143 DNA-binding transcriptional regulator HexR
YP_006020850.1	TIGRFAM: Pyruvate kinase; KEGG: shw:Sputw3181_2144 pyruvate kinase; PFAM: Pyruvate kinase, barrel; Pyruvate kinase, alpha/beta
YP_006020851.1	KEGG: she:Shewmr4_2336 transposase IS200-family protein; manually curated; PFAM: Transposase IS200-like
YP_006020852.1	PFAM: Protein of unknown function DUF1974; Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; KEGG: shw:Sputw3181_2146 acyl-CoA dehydrogenase
YP_006020853.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: shn:Shewana3_2155 TetR family transcriptional regulator
YP_006020854.1	KEGG: she:Shewmr4_2051 peptidyl-dipeptidase A; PFAM: Peptidase M2, peptidyl-dipeptidase A
YP_006020855.1	KEGG: she:Shewmr4_2052 Smr protein/MutS2; PFAM: Smr protein/MutS2 C-terminal; SMART: Smr protein/MutS2 C-terminal
YP_006020856.1	KEGG: shn:Shewana3_2158 hypothetical protein
YP_006020857.1	KEGG: she:Shewmr4_2054 SecC motif-containing protein; HAMAP: UPF0225 protein ychJ; PFAM: SEC-C motif
YP_006020858.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; GAF; Diguanylate cyclase, predicted; KEGG: shw:Sputw3181_2151 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; GAF; PAS
YP_006020859.1	KEGG: shw:Sputw3181_2152 hypothetical protein
YP_006020860.1	KEGG: shm:Shewmr7_1918 hypothetical protein
YP_006020861.1	KEGG: saz:Sama_1824 pyridoxal-5'-phosphate-dependent enzyme, beta subunit; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit
YP_006020862.1	PFAM: Radical SAM; KEGG: spc:Sputcn32_1855 radical activating enzyme
YP_006020863.1	KEGG: shw:Sputw3181_2155 queuosine biosynthesis protein QueC; TIGRFAM: Exoenzyme S synthesis protein B/queuosine synthesis; PFAM: Queuosine synthesis-like
YP_006020864.1	PFAM: Peptidase S54, rhomboid; KEGG: shw:Sputw3181_2156 rhomboid family protein
YP_006020865.1	SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; TIGRFAM: Excinuclease ABC, B subunit; KEGG: shw:Sputw3181_2157 excinuclease ABC subunit B; HAMAP: Excinuclease ABC, B subunit; PFAM: DNA/RNA helicase, C-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; UvrB/UvrC protein
YP_006020867.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; KEGG: shm:Shewmr7_1912 diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted
YP_006020868.1	TIGRFAM: Electron transport complex, RnfA; HAMAP: Electron transport complex protein rnfA; KEGG: shw:Sputw3181_2159 Na(+)-translocating NADH-quinone reductase subunit E; PFAM: Electron transport complex, Rnf/Nqr
YP_006020869.1	TIGRFAM: Electron transport complex, RnfB; HAMAP: Electron transport complex, RnfB, subgroup; KEGG: shw:Sputw3181_2160 electron transport complex protein RnfB; PFAM: Putative Fe-S cluster; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup
YP_006020870.1	TIGRFAM: Electron transport complex, RnfC; HAMAP: Electron transport complex protein rnfC; KEGG: she:Shewmr4_2066 electron transport complex protein RnfC; PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; Soluble ligand binding domain; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup
YP_006020871.1	KEGG: shn:Shewana3_2171 electron transport complex protein RnfD; TIGRFAM: Electron transport complex, RnfD; PFAM: NADH-quinone reductase NQR2/RnfD
YP_006020872.1	TIGRFAM: Electron transport complex, RnfG; HAMAP: Electron transport complex protein rnfG; KEGG: shn:Shewana3_2172 electron transport complex protein RnfG; PFAM: FMN-binding
YP_006020873.1	TIGRFAM: Electron transport complex, RnfE; HAMAP: Electron transport complex protein rnfE; KEGG: shw:Sputw3181_2164 electron transport complex RsxE subunit; PFAM: Electron transport complex, Rnf/Nqr
YP_006020874.1	SMART: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif; Helix-hairpin-helix DNA-binding motif, class 1; TIGRFAM: Endonuclease III/Nth; KEGG: shm:Shewmr7_1905 endonuclease III / DNA-(apurinic or apyrimidinic site) lyase; PFAM: HhH-GPD domain; Helix-hairpin-helix motif; Endonuclease III-like, iron-sulphur cluster loop motif
YP_006020875.1	KEGG: shn:Shewana3_2194 hypothetical protein
YP_006020876.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: pap:PSPA7_1265 putative transcriptional regulator
YP_006020877.1	KEGG: bpr:GBP346_A1575 hypothetical protein
YP_006020878.1	TIGRFAM: Glyoxalase I; KEGG: shw:Sputw3181_1911 lactoylglutathione lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase
YP_006020879.1	KEGG: shw:Sputw3181_1910 putative sulfite oxidase subunit YedZ; HAMAP: Sulfoxide reductase heme-binding subunit yedZ; PFAM: Ferric reductase-like transmembrane component, N-terminal
YP_006020880.1	KEGG: shw:Sputw3181_1909 putative sulfite oxidase subunit YedY; HAMAP: Sulfoxide reductase catalytic subunit yedY; PFAM: Oxidoreductase, molybdopterin binding
YP_006020881.1	PFAM: RmuC; KEGG: shw:Sputw3181_1908 hypothetical protein
YP_006020882.1	PFAM: Lytic transglycosylase-like, catalytic; KEGG: shw:Sputw3181_1907 lytic transglycosylase, catalytic
YP_006020883.1	KEGG: spc:Sputcn32_2106 diguanylate phosphodiesterase; PFAM: Diguanylate phosphodiesterase, predicted; SMART: Diguanylate phosphodiesterase, predicted
YP_006020884.1	PFAM: ATPase associated with various cellular activities, AAA-3; KEGG: shn:Shewana3_2242 ATPase
YP_006020885.1	PFAM: Protein of unknown function DUF58; KEGG: shm:Shewmr7_1855 hypothetical protein
YP_006020886.1	KEGG: shn:Shewana3_2244 transglutaminase domain-containing protein; PFAM: Transglutaminase-like; SMART: Transglutaminase-like
YP_006020887.1	TIGRFAM: Exodeoxyribonuclease V, RecC subunit; KEGG: shw:Sputw3181_1902 exodeoxyribonuclease V, gamma subunit; PFAM: Exodeoxyribonuclease V, RecC subunit
YP_006020888.1	KEGG: shw:Sputw3181_1901 exodeoxyribonuclease V, beta subunit; TIGRFAM: Exodeoxyribonuclease V, beta subunit; PFAM: DNA helicase, UvrD/REP type
YP_006020889.1	KEGG: shw:Sputw3181_1900 exodeoxyribonuclease V, alpha subunit; TIGRFAM: Exodeoxyribonuclease V, alpha subunit
YP_006020890.1	PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO_1883 acetyltransferase
YP_006020891.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: saz:Sama_1668 GGDEF domain-containing protein; SMART: Diguanylate cyclase, predicted
YP_006020892.1	PFAM: D-alanine--D-alanine ligase, C-terminal; D-alanine--D-alanine ligase, N-terminal; TIGRFAM: D-alanine--D-alanine ligase; HAMAP: D-alanine--D-alanine ligase; KEGG: she:Shewmr4_2129 D-alanyl-alanine synthetase A
YP_006020893.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; GAF; KEGG: spc:Sputcn32_1800 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; GAF
YP_006020894.1	PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; KEGG: spc:Sputcn32_1799 Fmu (Sun) domain-containing protein
YP_006020895.1	KEGG: shn:Shewana3_2310 glucose/galactose transporter; TIGRFAM: Bacterial glucose/galactose transporter; PFAM: Major facilitator superfamily MFS-1
YP_006020896.1	KEGG: shm:Shewmr7_2209 alpha amylase, catalytic region; PFAM: Glycosyl hydrolase, family 13, catalytic region; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region
YP_006020897.1	KEGG: she:Shewmr4_2134 TonB-dependent receptor; TIGRFAM: Bacterial TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug
YP_006020898.1	PFAM: Cyclomaltodextrinase, N-terminal; Glycosyl hydrolase, family 13, catalytic region; Cyclo-malto-dextrinase, C-terminal; KEGG: shm:Shewmr7_2211 alpha amylase, catalytic region; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region
YP_006020899.1	KEGG: she:Shewmr4_2136 alpha amylase, catalytic region; PFAM: Glycosyl hydrolase, family 13, catalytic region; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region
YP_006020900.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: shm:Shewmr7_2213 glyoxalase/bleomycin resistance protein/dioxygenase
YP_006020901.1	KEGG: shm:Shewmr7_2214 hypothetical protein
YP_006020902.1	KEGG: zpr:ZPR_2086 ferredoxin-dependent glutamate synthase; PFAM: Glutamate synthase, central-C
YP_006020903.1	KEGG: zpr:ZPR_1657 thiamine pyrophosphate protein domain protein TPP-binding; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Thiamine pyrophosphate enzyme, central region; Thiamine pyrophosphate enzyme, N-terminal TPP binding region
YP_006020904.1	PFAM: FAD dependent oxidoreductase; KEGG: cyn:Cyan7425_3962 polyprenyl synthetase
YP_006020905.1	PFAM: PRC-barrel; KEGG: mmw:Mmwyl1_1966 hypothetical protein
YP_006020906.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Glycine betaine/L-proline transport ATP-binding subunit; KEGG: sfr:Sfri_1817 glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter-like; Cystathionine beta-synthase, core
YP_006020907.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: sfr:Sfri_1818 binding-protein-dependent transport systems inner membrane component
YP_006020908.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: vcj:VCD_000930 hypothetical protein
YP_006020909.1	PFAM: Delta endotoxin, C-terminal; KEGG: spc:Sputcn32_1796 hypothetical protein
YP_006020910.1	TIGRFAM: Formylmethionine deformylase; HAMAP: Formylmethionine deformylase; KEGG: shw:Sputw3181_2230 peptide deformylase; PFAM: Formylmethionine deformylase
YP_006020911.1	PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; KEGG: shm:Shewmr7_2220 methylated-DNA-(protein)-cysteine S-methyltransferase
YP_006020912.1	KEGG: shw:Sputw3181_2232 hypothetical protein
YP_006020913.1	PFAM: Glutamine amidotransferase, class-II; KEGG: son:SO_2535 amidotransferase
YP_006020914.1	PFAM: Protein of unknown function DUF1974; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, type 1; KEGG: shw:Sputw3181_2234 acyl-CoA dehydrogenase
YP_006020915.1	PFAM: Acetamidase/Formamidase; KEGG: acetamidase/formamidase
YP_006020916.1	PFAM: Cation/H+ exchanger; KEGG: shn:Shewana3_2324 sodium/hydrogen exchanger
YP_006020917.1	TIGRFAM: Conserved hypothetical protein, CHP03503; KEGG: shw:Sputw3181_2244 hypothetical protein
YP_006020918.1	SMART: Exonuclease; TIGRFAM: DNA polymerase 3, epsilon subunit; DNA polymerase III, epsilon subunit; KEGG: shm:Shewmr7_2234 DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T/DNA polymerase III
YP_006020919.1	HAMAP: Ribonuclease H; KEGG: shw:Sputw3181_2246 ribonuclease H; PFAM: Ribonuclease H
YP_006020920.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: shm:Shewmr7_2236 LysR family transcriptional regulator
YP_006020921.1	PFAM: Methyltransferase type 11; KEGG: shw:Sputw3181_2248 methyltransferase type 11
YP_006020922.1	TIGRFAM: Hydroxyacylglutathione hydrolase; HAMAP: Hydroxyacylglutathione hydrolase; KEGG: shw:Sputw3181_2249 hydroxyacylglutathione hydrolase
YP_006020923.1	KEGG: shn:Shewana3_2370 MltD domain-containing protein; PFAM: MLTD-N; Lytic transglycosylase-like, catalytic; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup
YP_006020924.1	KEGG: shw:Sputw3181_2251 intracellular proteinase inhibitor domain-containing protein
YP_006020925.1	PFAM: AsmA; KEGG: shn:Shewana3_2372 AsmA protein
YP_006020926.1	TIGRFAM: Ribonuclease E inhibitor RraA; HAMAP: Ribonuclease E inhibitor RraA; KEGG: shw:Sputw3181_2253 ribonuclease activity regulator protein RraA; PFAM: Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase
YP_006020927.1	KEGG: shn:Shewana3_2374 hypothetical protein
YP_006020928.1	PFAM: Protein of unknown function DUF885, bacterial; KEGG: shw:Sputw3181_2255 hypothetical protein
YP_006020929.1	KEGG: shw:Sputw3181_2256 DEAD/DEAH box helicase domain-containing protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal
YP_006020930.1	PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; KEGG: shw:Sputw3181_2257 peptidyl-prolyl cis-trans isomerase, cyclophilin type
YP_006020931.1	KEGG: saz:Sama_2394 cyanophycinase-related exopeptidase-like protein
YP_006020932.1	PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: saz:Sama_2393 TonB-dependent receptor
YP_006020933.1	PFAM: C4-dicarboxylate anaerobic carrier-like; KEGG: saz:Sama_2392 hypothetical protein
YP_006020934.1	KEGG: saz:Sama_2391 isoaspartyl dipeptidase; TIGRFAM: Peptidase M38, beta-aspartyl dipeptidase; PFAM: Amidohydrolase 3
YP_006020935.1	KEGG: sfr:Sfri_2502 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF6, transmembrane
YP_006020936.1	KEGG: fph:Fphi_1734 lipoprotein
YP_006020937.1	PFAM: FAD dependent oxidoreductase; Glucose-methanol-choline oxidoreductase, N-terminal; KEGG: cja:CJA_3096 hypothetical protein
YP_006020938.1	KEGG: cja:CJA_3095 hypothetical protein
YP_006020939.1	KEGG: cja:CJA_3094 hypothetical protein
YP_006020940.1	PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: syn:slr5088 hypothetical protein
YP_006020941.1	KEGG: vpa:VPA0786 hypothetical protein
YP_006020942.1	KEGG: vex:VEA_000248 transcriptional regulator; PFAM: HTH transcriptional regulator, MerR; Transcription regulator MerR, DNA binding; SMART: HTH transcriptional regulator, MerR
YP_006020943.1	PFAM: Cupin 2, conserved barrel; KEGG: plu:plu2249 hypothetical protein
YP_006020945.1	KEGG: svo:SVI_2227 type III secretion system EscU protein; TIGRFAM: Type III secretion protein HrpY/HrcU; PFAM: Type III secretion exporter
YP_006020946.1	KEGG: svo:SVI_2228 type III secretion system apparatus protein, SpaR/YscT family; TIGRFAM: Type III secretion protein SpaR/YscT; PFAM: Type III secretion system inner membrane R protein
YP_006020947.1	KEGG: svo:SVI_2229 type III secretion system EscS protein; TIGRFAM: Type III secretion protein HrpO; PFAM: Bacterial export protein FliQ, family 3
YP_006020948.1	KEGG: svo:SVI_2230 type III secretion system EscR protein; TIGRFAM: Yop virulence translocation protein R; PFAM: Type III secretion system inner membrane P protein
YP_006020949.1	KEGG: svo:SVI_2231 hypothetical protein
YP_006020950.1	KEGG: svo:SVI_2232 hypothetical protein
YP_006020951.1	KEGG: svo:SVI_2233 hypothetical protein
YP_006020952.1	SMART: ATPase, AAA+ type, core; TIGRFAM: ATPase, type III secretion system, FliI/YscN; KEGG: svo:SVI_2234 ATPase; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain
YP_006020953.1	KEGG: svo:SVI_2235 type III secretion system apparatus protein, HrcV family; TIGRFAM: Type III secretion protein HrcV; PFAM: Type III secretion system FHIPEP
YP_006020954.1	KEGG: svo:SVI_2236 hypothetical protein
YP_006020955.1	PFAM: SicP binding; KEGG: svo:SVI_2237 hypothetical protein
YP_006020956.1	PFAM: Tir chaperone; KEGG: sew:SeSA_A3032 secretion chaparone
YP_006020957.1	TIGRFAM: Type III secretion system effector delivery regulator TyeA; KEGG: svo:SVI_2238 secretion system apparatus protein SsaL
YP_006020958.1	KEGG: svo:SVI_2239 hypothetical protein
YP_006020959.1	KEGG: svo:SVI_2240 hypothetical protein
YP_006020960.1	KEGG: svo:SVI_2241 type III secretion system apparatus lipoprotein; TIGRFAM: Type III secretion system lipoprotein HrcJ/YscJ; PFAM: Secretory protein YscJ/FliF
YP_006020961.1	KEGG: svo:SVI_2242 hypothetical protein; TIGRFAM: Type III secretion system, YscI/HrpB; PFAM: Type III secretion system, YscI/HrpB-like
YP_006020962.1	KEGG: svo:SVI_2243 hypothetical protein; TIGRFAM: Type III secretion system SsaH; PFAM: Type III secretion system SsaH
YP_006020963.1	KEGG: svo:SVI_2244 type III secretion system apparatus protein; TIGRFAM: Type III secretion system needle protein; PFAM: Type III secretion system needle protein
YP_006020964.1	SMART: Helix-turn-helix, AraC domain; KEGG: svo:SVI_2245 AraC-type DNA-binding domain-containing protein
YP_006020965.1	KEGG: etr:ETAE_0866 hypothetical protein
YP_006020966.1	TIGRFAM: Type III secretion system, low calcium response, chaperone LcrH/SycD; KEGG: svo:SVI_2248 type III secretion chaperone
YP_006020967.1	KEGG: hde:HDEF_0865 hypothetical protein
YP_006020968.1	KEGG: svo:SVI_2251 hypothetical protein
YP_006020969.1	KEGG: svo:SVI_2252 hypothetical protein
YP_006020970.1	KEGG: svo:SVI_2253 secretion system effector
YP_006020971.1	TIGRFAM: Type III secretion system, low calcium response, chaperone LcrH/SycD; KEGG: svo:SVI_2254 type III secretion system chaperone, SycD family
YP_006020972.1	PFAM: EspA-like secreted protein; KEGG: svo:SVI_2255 hypothetical protein
YP_006020973.1	PFAM: EspA-like secreted protein; KEGG: svo:SVI_2256 secreted protein EspA
YP_006020974.1	KEGG: svo:SVI_2257 hypothetical protein
YP_006020975.1	KEGG: svo:SVI_2258 hypothetical protein
YP_006020976.1	TIGRFAM: Type III secretion system YscD/HrpQ; KEGG: svo:SVI_2259 type III secretion system apparatus protein, YscD/HrpQ family
YP_006020977.1	KEGG: svo:SVI_2260 type III secretion system EscC protein; TIGRFAM: Type III secretion system outer membrane pore YscC/HrcC; PFAM: Type II/III secretion system; NolW-like
YP_006020978.1	KEGG: svo:SVI_2261 hypothetical protein
YP_006020979.1	KEGG: svo:SVI_2262 sensor histidine kinase/response regulator; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain
YP_006020980.1	KEGG: svo:SVI_2263 LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal
YP_006020981.1	KEGG: rso:RSc2322 transcription regulator protein; PFAM: Transcription regulator MerR, DNA binding; HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR
YP_006020982.1	PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: rso:RSc2321 dehydrogenase/reductase oxidoreductase protein
YP_006020983.1	KEGG: smd:Smed_4100 MerR family transcriptional regulator; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR
YP_006020984.1	KEGG: sfr:Sfri_4014 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911
YP_006020985.1	PFAM: Integrase, catalytic core, phage; KEGG: shm:Shewmr7_1761 phage integrase family protein
YP_006020986.1	KEGG: spc:Sputcn32_1813 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; Nitrate/nitrite sensing protein NIT; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling
YP_006020987.1	KEGG: son:SO_2137 hypothetical protein; TIGRFAM: Multiple antibiotic resistance (MarC)-related; PFAM: Multiple antibiotic resistance (MarC)-related
YP_006020988.1	KEGG: shw:Sputw3181_2214 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, iron-type; Aldehyde dehydrogenase
YP_006020989.1	PFAM: Peptidase M14, carboxypeptidase A; KEGG: shw:Sputw3181_2215 hypothetical protein
YP_006020990.1	PFAM: GCN5-related N-acetyltransferase; KEGG: shw:Sputw3181_2216 GCN5-related N-acetyltransferase
YP_006020991.1	KEGG: shw:Sputw3181_2217 peptidase S9 prolyl oligopeptidase
YP_006020992.1	TIGRFAM: Fe-S type hydro-lyases tartrate/fumarate alpha region; Fe-S type hydro-lyases tartrate/fumarate beta region; KEGG: spc:Sputcn32_1807 tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit; PFAM: Fe-S type hydro-lyases tartrate/fumarate beta region; Fe-S type hydro-lyases tartrate/fumarate alpha region
YP_006020993.1	TIGRFAM: Para-aminobenzoate synthase, component I; KEGG: shw:Sputw3181_2219 para-aminobenzoate synthase, subunit I; PFAM: Chorismate binding, C-terminal; Anthranilate synthase component I, N-terminal
YP_006020994.1	PFAM: NUDIX hydrolase domain; KEGG: shw:Sputw3181_2220 NUDIX hydrolase
YP_006020995.1	KEGG: shm:Shewmr7_2203 hypothetical protein
YP_006020996.1	TIGRFAM: Asparaginyl-tRNA synthetase, class IIb; KEGG: shw:Sputw3181_2222 asparaginyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type
YP_006020997.1	PFAM: Protein of unknown function DUF1801; KEGG: shw:Sputw3181_2102 hypothetical protein
YP_006020998.1	KEGG: shn:Shewana3_1902 periplasmic nitrate reductase subunit NapC; TIGRFAM: Periplasmic nitrate reductase c-type cytochrome, NapC/NirT; PFAM: NapC/NirT cytochrome c, N-terminal
YP_006020999.1	PFAM: Nitrate reductase cytochrome c-type subunit (NapB); KEGG: shw:Sputw3181_2104 nitrate reductase cytochrome c-type subunit (NapB)
YP_006021000.1	PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 region; Twin-arginine translocation pathway, signal sequence, subgroup; Molydopterin dinucleotide-binding region; TIGRFAM: Nitrate reductase, large subunit, periplasmic; Twin-arginine translocation pathway, signal sequence; HAMAP: Nitrate reductase, large subunit, periplasmic; KEGG: shm:Shewmr7_2135 nitrate reductase catalytic subunit
YP_006021001.1	PFAM: NapD; KEGG: shw:Sputw3181_2106 NapD family protein
YP_006021002.1	PFAM: Nitrate/trimethylamine N-oxide reductase NapE/TorE; KEGG: shw:Sputw3181_2107 periplasmic nitrate reductase NapE
YP_006021003.1	TIGRFAM: RNA helicase, ATP-dependent DEAH box, HrpA type; PFAM: Domain of unknown function DUF1605; Helicase-associated region; DNA/RNA helicase, C-terminal; KEGG: spc:Sputcn32_1900 ATP-dependent helicase HrpA; SMART: DEAD-like helicase, N-terminal; ATPase, AAA+ type, core; DNA/RNA helicase, C-terminal
YP_006021004.1	KEGG: shm:Shewmr7_2139 signal transduction protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core
YP_006021005.1	PFAM: Protein of unknown function DUF2254, membrane; KEGG: dba:Dbac_1190 membrane protein
YP_006021006.1	KEGG: shm:Shewmr7_2140 peptidase T2, asparaginase 2; PFAM: Peptidase T2, asparaginase 2
YP_006021007.1	PFAM: Bacterial surface antigen (D15); Surface antigen variable number; KEGG: shw:Sputw3181_2111 surface antigen (D15)
YP_006021008.1	PFAM: Protein of unknown function DUF490; KEGG: shw:Sputw3181_2112 hypothetical protein
YP_006021009.1	KEGG: shw:Sputw3181_2113 50S ribosomal protein L25; HAMAP: 50S ribosomal protein L25; PFAM: Ribosomal protein L25, N-terminal
YP_006021011.1	KEGG: shw:Sputw3181_2114 hypothetical protein
YP_006021012.1	PFAM: Protein of unknown function DUF882, bacterial; KEGG: shw:Sputw3181_2115 hypothetical protein
YP_006021013.1	PFAM: YkuD domain; Peptidoglycan binding-like; KEGG: spc:Sputcn32_1892 peptidoglycan binding domain-containing protein
YP_006021014.1	KEGG: shw:Sputw3181_1932 glucosyltransferase MdoH; HAMAP: Glucans biosynthesis glucosyltransferase H; PFAM: Glycosyl transferase, family 2
YP_006021015.1	KEGG: shw:Sputw3181_1931 glucan biosynthesis protein G; HAMAP: Glucans biosynthesis protein G; PFAM: Glucan biosynthesis, periplasmic, MdoG C-terminal
YP_006021016.1	KEGG: son:SO_2105 sensor protein YgiY, putative; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_006021017.1	KEGG: shw:Sputw3181_1929 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region
YP_006021018.1	PFAM: ApbE-like lipoprotein; KEGG: she:Shewmr4_1826 ApbE family lipoprotein
YP_006021019.1	KEGG: she:Shewmr4_1825 hypothetical protein
YP_006021020.1	KEGG: shw:Sputw3181_1926 putative lipoprotein
YP_006021021.1	PFAM: Redoxin; KEGG: shm:Shewmr7_2154 redoxin domain-containing protein
YP_006021022.1	TIGRFAM: [Ni-Fe]-hydrogenase, small subunit; Twin-arginine translocation pathway, signal sequence; KEGG: son:SO_2099 quinone-reactive Ni/Fe hydrogenase, small subunit precursor; PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit
YP_006021023.1	KEGG: son:SO_2098 quinone-reactive Ni/Fe hydrogenase, large subunit; PFAM: Nickel-dependent hydrogenase, large subunit
YP_006021024.1	TIGRFAM: Nickel-dependent hydrogenase b-type cytochrome subunit; KEGG: shn:Shewana3_1878 Ni/Fe-hydrogenase, b-type cytochrome subunit
YP_006021025.1	KEGG: shn:Shewana3_1877 hydrogenase expression/formation protein; TIGRFAM: Peptidase A31, hydrogenase expression/formation protein; Peptidase A31, hydrogen uptake protein; PFAM: Peptidase A31, hydrogen uptake protein
YP_006021026.1	KEGG: shw:Sputw3181_1920 hypothetical protein
YP_006021027.1	KEGG: shw:Sputw3181_1919 (NiFe) hydrogenase maturation protein HypF; TIGRFAM: Hydrogenase maturation factor, HypF-type; PFAM: Sua5/YciO/YrdC, N-terminal; Acylphosphatase-like; Zinc finger, HypF-type
YP_006021028.1	KEGG: shw:Sputw3181_2173 hydrogenase accessory protein HypB; TIGRFAM: Hydrogenase accessory protein HypB; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like
YP_006021029.1	KEGG: shw:Sputw3181_2174 hydrogenase assembly chaperone HypC/HupF; TIGRFAM: Hydrogenase expression/formation protein, HupF/HypC; PFAM: Hydrogenase expression/formation protein, HupF/HypC
YP_006021030.1	KEGG: shw:Sputw3181_2175 hydrogenase expression/formation protein HypD; TIGRFAM: Hydrogenase formation HypD protein; PFAM: Hydrogenase formation HypD protein
YP_006021031.1	KEGG: shw:Sputw3181_2176 hydrogenase expression/formation protein HypE; TIGRFAM: Hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein, C-terminal; AIR synthase related protein
YP_006021032.1	TIGRFAM: Hydrogenase nickel incorporation protein HypA/HybF; HAMAP: Hydrogenase nickel incorporation protein HypA/HybF; KEGG: shw:Sputw3181_2177 hydrogenase nickel insertion protein HypA; PFAM: Hydrogenase nickel incorporation protein HypA/HybF
YP_006021033.1	PFAM: Glutathione-dependent formaldehyde-activating, GFA; KEGG: bpy:Bphyt_4603 glutathione-dependent formaldehyde-activating GFA
YP_006021034.1	KEGG: azc:AZC_1240 putative phenazine biosynthesis PhzC/PhzF protein; TIGRFAM: Phenazine biosynthesis PhzC/PhzF protein; PFAM: Phenazine biosynthesis PhzC/PhzF protein
YP_006021035.1	KEGG: she:Shewmr4_1811 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; TIGRFAM: Lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; PFAM: Bacterial lipid A biosynthesis acyltransferase
YP_006021036.1	SMART: Histone-like bacterial DNA-binding protein; TIGRFAM: Integration host factor, alpha subunit; KEGG: shw:Sputw3181_2179 integration host factor subunit alpha; HAMAP: Integration host factor, alpha subunit; PFAM: Histone-like bacterial DNA-binding protein
YP_006021037.1	TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; HAMAP: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; KEGG: shw:Sputw3181_2180 phenylalanyl-tRNA synthetase subunit beta
YP_006021038.1	KEGG: shw:Sputw3181_2181 phenylalanyl-tRNA synthetase subunit alpha; TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, alpha subunit; PFAM: Phenylalanyl-tRNA synthetase alpha chain; Phenylalanyl-tRNA synthetase, class II, N-terminal
YP_006021039.1	KEGG: shw:Sputw3181_2182 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling
YP_006021040.1	KEGG: shw:Sputw3181_2258 hypothetical protein; HAMAP: Uncharacterised conserved protein UCP006173; PFAM: Uncharacterised protein family UPF0153
YP_006021041.1	TIGRFAM: Lytic murein transglycosylase; KEGG: shm:Shewmr7_2248 putative transglycosylase
YP_006021042.1	KEGG: shm:Shewmr7_2249 hypothetical protein; HAMAP: YcgL domain; PFAM: YcgL domain
YP_006021043.1	TIGRFAM: Septum formation inhibitor MinC; HAMAP: Septum formation inhibitor MinC; KEGG: shw:Sputw3181_2260 septum formation inhibitor; PFAM: Septum formation inhibitor MinC, C-terminal; Septum formation inhibitor MinC, N-terminal
YP_006021044.1	KEGG: shw:Sputw3181_2261 septum site-determining protein MinD; TIGRFAM: Septum site-determining protein MinD; PFAM: Cobyrinic acid a,c-diamide synthase
YP_006021045.1	TIGRFAM: Septum formation topological specificity factor MinE; HAMAP: Septum formation topological specificity factor MinE; KEGG: shw:Sputw3181_2262 cell division topological specificity factor MinE; PFAM: Septum formation topological specificity factor MinE
YP_006021046.1	SMART: 3'-5' exonuclease; Helicase/RNase D C-terminal, HRDC domain; TIGRFAM: Ribonuclease D; KEGG: spc:Sputcn32_1762 ribonuclease D; PFAM: 3'-5' exonuclease; Helicase/RNase D C-terminal, HRDC domain
YP_006021047.1	KEGG: shm:Shewmr7_2254 long-chain-fatty-acid--CoA ligase; PFAM: AMP-dependent synthetase/ligase
YP_006021048.1	PFAM: Alpha/beta hydrolase fold-1; KEGG: shm:Shewmr7_2255 alpha/beta hydrolase fold
YP_006021049.1	KEGG: spc:Sputcn32_1759 hypothetical protein
YP_006021050.1	KEGG: she:Shewmr4_2180 hypothetical protein
YP_006021051.1	KEGG: shw:Sputw3181_2268 hypothetical protein
YP_006021052.1	PFAM: Peptidase M22, glycoprotease; KEGG: shw:Sputw3181_2269 peptidase M22, glycoprotease
YP_006021053.1	KEGG: shw:Sputw3181_2270 delta-aminolevulinic acid dehydratase; PFAM: Tetrapyrrole biosynthesis, porphobilinogen synthase
YP_006021054.1	PFAM: Peptide methionine sulphoxide reductase MsrA; Methionine sulphoxide reductase B; TIGRFAM: Peptide methionine sulphoxide reductase MsrA; HAMAP: Peptide methionine sulphoxide reductase MsrA; KEGG: shw:Sputw3181_2271 bifunctional methionine sulfoxide reductase B/A protein
YP_006021055.1	PFAM: Oxoglutarate/iron-dependent oxygenase; KEGG: spc:Sputcn32_1753 2OG-Fe(II) oxygenase
YP_006021056.1	KEGG: shw:Sputw3181_2273 ribosomal biogenesis GTPase; TIGRFAM: GTP-binding protein, ribosome biogenesis, YlqF; PFAM: GTP-binding protein, HSR1-related
YP_006021057.1	KEGG: spc:Sputcn32_1749 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight
YP_006021058.1	KEGG: shm:Shewmr7_2268 DNA ligase; PFAM: ATP dependent DNA ligase, central
YP_006021059.1	PFAM: Diacylglycerol kinase, prokaryotic; KEGG: shn:Shewana3_2402 diacylglycerol kinase
YP_006021060.1	PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: shn:Shewana3_2403 LysR family transcriptional regulator
YP_006021061.1	PFAM: Protein of unknown function DUF413; KEGG: shw:Sputw3181_2280 hypothetical protein
YP_006021062.1	KEGG: shw:Sputw3181_2281 alpha-L-glutamate ligase; TIGRFAM: S6 modification enzyme RimK; PFAM: ATP-grasp fold, RimK-type
YP_006021063.1	KEGG: shm:Shewmr7_2273 hypothetical protein
YP_006021064.1	PFAM: Peptidase M28; KEGG: she:Shewmr4_2197 peptidase M28
YP_006021065.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: shw:Sputw3181_2284 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_006021066.1	KEGG: spc:Sputcn32_1740 sortase family protein; TIGRFAM: sortase; Peptidase C60, sortase A/B; PFAM: Peptidase C60, sortase A/B
YP_006021067.1	TIGRFAM: sortase target protein; LPXTG-motif cell wall anchor; PFAM: Vault protein inter-alpha-trypsin; von Willebrand factor, type A; KEGG: shw:Sputw3181_2286 cell wall anchor domain-containing protein; SMART: von Willebrand factor, type A; Vault protein inter-alpha-trypsin, metazoa
YP_006021068.1	KEGG: shn:Shewana3_2411 OmpA/MotB domain-containing protein; TIGRFAM: sortase system OmpA family protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal
YP_006021069.1	TIGRFAM: dedicated sortase system response regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; KEGG: shw:Sputw3181_2287 two component transcriptional regulator; SMART: Signal transduction response regulator, receiver region
YP_006021070.1	TIGRFAM: dedicated sortase system histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; KEGG: shn:Shewana3_2413 ATPase domain-containing protein; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_006021071.1	TIGRFAM: Cystathionine beta-lyase, bacterial; KEGG: spc:Sputcn32_1736 cystathionine beta-lyase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme
YP_006021072.1	PFAM: CreA; KEGG: shw:Sputw3181_2290 CreA family protein
YP_006021073.1	KEGG: shw:Sputw3181_2291 putative chaperone
YP_006021074.1	PFAM: Polyphosphate kinase; TIGRFAM: polyphosphate kinase 1; HAMAP: Polyphosphate kinase; KEGG: shw:Sputw3181_2292 polyphosphate kinase
YP_006021075.1	TIGRFAM: exopolyphosphatase; KEGG: shn:Shewana3_2418 Ppx/GppA phosphatase; PFAM: Ppx/GppA phosphatase
YP_006021076.1	KEGG: shw:Sputw3181_2394 heat shock protein DnaJ domain-containing protein; PFAM: Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal
YP_006021077.1	KEGG: shw:Sputw3181_2395 hypothetical protein
YP_006021078.1	KEGG: shw:Sputw3181_2396 hypothetical protein
YP_006021079.1	KEGG: shw:Sputw3181_2397 hypothetical protein
YP_006021080.1	manually curated
YP_006021081.1	KEGG: pnu:Pnuc_1126 hypothetical protein
YP_006021082.1	PFAM: GCN5-related N-acetyltransferase; KEGG: swd:Swoo_4269 GCN5-related N-acetyltransferase
YP_006021083.1	KEGG: shw:Sputw3181_2400 endonuclease/exonuclease/phosphatase; PFAM: PKD; Endonuclease/exonuclease/phosphatase; SMART: PKD
YP_006021084.1	KEGG: spc:Sputcn32_1621 hypothetical protein
YP_006021085.1	KEGG: spc:Sputcn32_1620 hypothetical protein
YP_006021086.1	PFAM: Protein of unknown function DUF2157, membrane; KEGG: spc:Sputcn32_1619 hypothetical protein
YP_006021087.1	KEGG: shw:Sputw3181_2404 hypothetical protein
YP_006021088.1	KEGG: shw:Sputw3181_2405 hypothetical protein
YP_006021089.1	KEGG: she:Shewmr4_1529 hypothetical protein
YP_006021090.1	PFAM: GCN5-related N-acetyltransferase; KEGG: shw:Sputw3181_2407 GCN5-related N-acetyltransferase
YP_006021091.1	PFAM: GCN5-related N-acetyltransferase; KEGG: shm:Shewmr7_1594 GCN5-related N-acetyltransferase
YP_006021092.1	SMART: Prolyl 4-hydroxylase, alpha subunit; KEGG: shm:Shewmr7_1593 prolyl 4-hydroxylase, alpha subunit
YP_006021093.1	PFAM: GCN5-related N-acetyltransferase; KEGG: spc:Sputcn32_1666 GCN5-related N-acetyltransferase
YP_006021094.1	PFAM: Nitroreductase-like; KEGG: spc:Sputcn32_1665 nitroreductase
YP_006021095.1	PFAM: DoxX; KEGG: shn:Shewana3_2495 DoxX family protein
YP_006021096.1	KEGG: spc:Sputcn32_1664 hypothetical protein
YP_006021097.1	PFAM: Aminoglycoside phosphotransferase; KEGG: spc:Sputcn32_1663 aminoglycoside phosphotransferase
YP_006021098.1	KEGG: shn:Shewana3_2498 nicotinamide mononucleotide transporter PnuC; TIGRFAM: Nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC
YP_006021099.1	KEGG: spc:Sputcn32_1661 hypothetical protein
YP_006021100.1	PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: she:Shewmr4_2310 TonB-dependent receptor
YP_006021101.1	PFAM: Protein of unknown function DUF1425; KEGG: shw:Sputw3181_2370 hypothetical protein
YP_006021102.1	KEGG: shw:Sputw3181_2371 hypothetical protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily
YP_006021103.1	KEGG: shm:Shewmr7_2383 hypothetical protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily
YP_006021104.1	PFAM: Histidine triad (HIT) protein; KEGG: shn:Shewana3_2507 histidine triad (HIT) protein
YP_006021105.1	PFAM: Peptidase M61; KEGG: shw:Sputw3181_2373 peptidase M61 domain-containing protein
YP_006021106.1	KEGG: shn:Shewana3_2509 LuxR family transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal
YP_006021107.1	KEGG: shn:Shewana3_2510 cytochrome b561
YP_006021108.1	KEGG: shn:Shewana3_2511 cytochrome c3
YP_006021109.1	PFAM: Uncharacterised protein family UPF0118; KEGG: shw:Sputw3181_2328 hypothetical protein
YP_006021110.1	PFAM: SirA-like; KEGG: shw:Sputw3181_2329 SirA family protein
YP_006021111.1	PFAM: Peptidase M48, Ste24p; KEGG: she:Shewmr4_2347 peptidase M48, Ste24p
YP_006021112.1	KEGG: shn:Shewana3_1648 arsenate reductase; TIGRFAM: Arsenate reductase; PFAM: Arsenate reductase-like
YP_006021113.1	PFAM: Protein of unknown function DUF2069, membrane; KEGG: son:SO_2872 hypothetical protein
YP_006021114.1	KEGG: spc:Sputcn32_1692 hypothetical protein
YP_006021115.1	KEGG: shw:Sputw3181_2334 DNA replication initiation factor; TIGRFAM: Chromosomal replication control, regulator Hda; PFAM: Chromosomal replication control, initiator (DnaA)/regulator (Hda)
YP_006021116.1	PFAM: Protein of unknown function DUF2066; KEGG: spc:Sputcn32_1690 hypothetical protein
YP_006021117.1	KEGG: shw:Sputw3181_2336 uracil-xanthine permease; TIGRFAM: Xanthine/uracil permease; PFAM: Xanthine/uracil/vitamin C permease
YP_006021118.1	KEGG: shw:Sputw3181_2337 glutaredoxin-like protein; TIGRFAM: Glutaredoxin-related protein; PFAM: Glutaredoxin
YP_006021119.1	KEGG: shn:Shewana3_1639 manganese and iron superoxide dismutase; PFAM: Manganese/iron superoxide dismutase, C-terminal; Manganese/iron superoxide dismutase, N-terminal
YP_006021120.1	KEGG: shm:Shewmr7_1646 putative serine protein kinase, PrkA; PFAM: PrkA AAA; PrkA serine kinase; SMART: PrkA AAA
YP_006021121.1	PFAM: Protein of unknown function DUF444; KEGG: shm:Shewmr7_1645 hypothetical protein
YP_006021122.1	PFAM: Sporulation stage V, protein R; KEGG: shm:Shewmr7_1644 SpoVR family protein
YP_006021123.1	SMART: HTH transcriptional regulator, GntR; TIGRFAM: Fatty acid response transcription factor FadR; KEGG: shw:Sputw3181_2342 fatty acid metabolism regulator; HAMAP: Fatty acid metabolism regulator protein; PFAM: Fatty acid responsive transcription factor FadR, C-terminal; HTH transcriptional regulator, GntR
YP_006021124.1	TIGRFAM: Na+/H+ antiporter NhaB; HAMAP: Na+/H+ antiporter NhaB; KEGG: son:SO_2886 sodium/proton antiporter; PFAM: Na+/H+ antiporter NhaB
YP_006021125.1	KEGG: shm:Shewmr7_1641 disulfide bond formation protein B; HAMAP: Disulfide bond formation protein B; PFAM: Disulphide bond formation protein DsbB
YP_006021126.1	TIGRFAM: PAS; PFAM: PAS fold-4; Cache; ATP-binding region, ATPase-like; KEGG: spc:Sputcn32_1680 putative PAS/PAC sensor protein; SMART: PAS
YP_006021127.1	KEGG: spc:Sputcn32_2331 hypothetical protein
YP_006021128.1	KEGG: shm:Shewmr7_1637 hypothetical protein
YP_006021129.1	PFAM: Lipid/polyisoprenoid-binding, YceI-like; KEGG: shn:Shewana3_1628 YceI family protein
YP_006021130.1	KEGG: shw:Sputw3181_2376 hypothetical protein; HAMAP: Protein of unknown function DUF188; PFAM: Protein of unknown function DUF188
YP_006021131.1	PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal; TIGRFAM: Pyridoxamine 5'-phosphate oxidase; HAMAP: Pyridoxamine 5'-phosphate oxidase; KEGG: shw:Sputw3181_2377 pyridoxamine 5'-phosphate oxidase
YP_006021132.1	KEGG: shw:Sputw3181_2378 adenosylmethionine decarboxylase; PFAM: S-adenosylmethionine decarboxylase
YP_006021133.1	PFAM: Orn/DAP/Arg decarboxylase 2; TIGRFAM: Arginine decarboxylase; HAMAP: Biosynthetic arginine decarboxylase; KEGG: shw:Sputw3181_2379 arginine decarboxylase
YP_006021134.1	manually curated; KEGG: shm:Shewmr7_1631 hypothetical protein
YP_006021135.1	KEGG: shw:Sputw3181_2380 hypothetical protein
YP_006021136.1	PFAM: Protein of unknown function DUF480; KEGG: shw:Sputw3181_2381 hypothetical protein
YP_006021137.1	KEGG: shw:Sputw3181_2382 hypothetical protein
YP_006021138.1	PFAM: ABC transporter-like; KEGG: shw:Sputw3181_2383 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_006021139.1	KEGG: she:Shewmr4_1550 histone family protein DNA-binding protein; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein
YP_006021140.1	KEGG: shw:Sputw3181_1666 dithiobiotin synthetase; TIGRFAM: Dethiobiotin synthase; HAMAP: Dethiobiotin synthase
YP_006021141.1	PFAM: Methyltransferase type 11; KEGG: shw:Sputw3181_1665 biotin biosynthesis protein BioC
YP_006021142.1	KEGG: shw:Sputw3181_1664 8-amino-7-oxononanoate synthase; PFAM: Aminotransferase, class I/II
YP_006021143.1	KEGG: shw:Sputw3181_1663 biotin synthase; PFAM: Biotin/thiamin synthesis-associated protein; Radical SAM; TIGRFAM: Biotin synthase; HAMAP: Biotin synthase; SMART: Elongator protein 3/MiaB/NifB
YP_006021144.1	TIGRFAM: Adenosylmethionine--8-amino-7-oxononanoate aminotransferase; KEGG: shw:Sputw3181_1662 adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: Aminotransferase class-III
YP_006021145.1	KEGG: spc:Sputcn32_2347 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; Cache, type 2; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_006021146.1	KEGG: shn:Shewana3_2522 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region
YP_006021147.1	PFAM: AMP-dependent synthetase/ligase; TIGRFAM: Acetate--CoA ligase; HAMAP: Acetyl-coenzyme A synthetase; KEGG: shw:Sputw3181_1659 acetyl-CoA synthetase
YP_006021148.1	KEGG: shw:Sputw3181_1658 type III restriction enzyme, res subunit; PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal
YP_006021149.1	KEGG: shw:Sputw3181_1657 glutaredoxin 1; TIGRFAM: Glutaredoxin, GrxA; PFAM: Glutaredoxin
YP_006021150.1	PFAM: Porin, alpha proteobacteria type; KEGG: shm:Shewmr7_2437 hypothetical protein
YP_006021151.1	TIGRFAM: Tol-Pal system, YbgF; KEGG: shw:Sputw3181_2413 tetratricopeptide domain-containing protein
YP_006021152.1	KEGG: shw:Sputw3181_2414 OmpA domain-containing protein; TIGRFAM: Peptidoglycan-associated lipoprotein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal
YP_006021153.1	TIGRFAM: Tol-Pal system beta propeller repeat-containing protein, TolB; HAMAP: Tol-Pal system beta propeller repeat-containing protein, TolB; KEGG: shw:Sputw3181_2415 translocation protein TolB; PFAM: TolB, N-terminal; WD40-like Beta Propeller
YP_006021154.1	KEGG: son:SO_2749 TolA protein; TIGRFAM: Tol-Pal system, TolA; PFAM: Tol-Pal system, TolA
YP_006021155.1	KEGG: shw:Sputw3181_2417 biopolymer transport protein ExbD/TolR; TIGRFAM: Biopolymer transport, TolR; PFAM: Biopolymer transport protein ExbD/TolR
YP_006021156.1	KEGG: shw:Sputw3181_2418 MotA/TolQ/ExbB proton channel; TIGRFAM: Tol-Pal system, TolQ; PFAM: MotA/TolQ/ExbB proton channel
YP_006021157.1	KEGG: shw:Sputw3181_2419 4-hydroxybenzoyl-CoA thioesterase; TIGRFAM: Tol-Pal system-associated acyl-CoA thioesterase; 4-hydroxybenzoyl-CoA thioesterase; PFAM: Thioesterase superfamily
YP_006021158.1	KEGG: shm:Shewmr7_2445 prolyl oligopeptidase; PFAM: Peptidase S9A, oligopeptidase, N-terminal beta-propeller; Peptidase S9, prolyl oligopeptidase, catalytic domain
YP_006021159.1	PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: shm:Shewmr7_2446 OmpA/MotB domain-containing protein
YP_006021160.1	TIGRFAM: Ribonuclease T; PFAM: Exonuclease, RNase T/DNA polymerase III; KEGG: son:SO_2755 ribonuclease T; SMART: Exonuclease
YP_006021161.1	KEGG: shw:Sputw3181_2423 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin, C-terminal
YP_006021162.1	PFAM: Na+/H+ antiporter NhaC-like; KEGG: shn:Shewana3_2542 Na+/H+ antiporter NhaC
YP_006021163.1	KEGG: shw:Sputw3181_2425 uracil phosphoribosyltransferase; TIGRFAM: Uracil phosphoribosyl transferase; PFAM: Phosphoribosyltransferase
YP_006021164.1	TIGRFAM: Phosphoribosylformylglycinamidine cyclo-ligase; KEGG: spc:Sputcn32_1596 phosphoribosylaminoimidazole synthetase; PFAM: AIR synthase related protein, C-terminal; AIR synthase related protein
YP_006021165.1	TIGRFAM: Phosphoribosylglycinamide formyltransferase; KEGG: shw:Sputw3181_2427 phosphoribosylglycinamide formyltransferase; PFAM: Formyl transferase, N-terminal
YP_006021166.1	KEGG: son:SO_2762 UMP phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase-like hydrolase
YP_006021167.1	PFAM: Peptidase M28; KEGG: shw:Sputw3181_2429 peptidase M28
YP_006021168.1	TIGRFAM: Asparagine synthase, glutamine-hydrolyzing; KEGG: shw:Sputw3181_2430 asparagine synthetase B; PFAM: Asparagine synthase; Glutamine amidotransferase, class-II
YP_006021169.1	PFAM: Patatin; KEGG: spc:Sputcn32_1591 patatin
YP_006021170.1	KEGG: shw:Sputw3181_2432 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug
YP_006021171.1	KEGG: shw:Sputw3181_2433 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central region; Acyl-CoA dehydrogenase, N-terminal
YP_006021172.1	PFAM: Aldose 1-epimerase; KEGG: spc:Sputcn32_1588 aldose 1-epimerase
YP_006021173.1	KEGG: shw:Sputw3181_2435 6-phosphogluconate dehydrogenase, NAD-binding; PFAM: 6-phosphogluconate dehydrogenase, NAD-binding
YP_006021174.1	PFAM: Thioesterase superfamily; KEGG: shw:Sputw3181_2436 thioesterase superfamily protein
YP_006021175.1	KEGG: shn:Shewana3_2556 hypothetical protein
YP_006021176.1	TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; KEGG: shw:Sputw3181_2438 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal
YP_006021177.1	TIGRFAM: Acyl carrier protein (ACP); HAMAP: Acyl carrier protein (ACP); KEGG: shw:Sputw3181_2439 acyl carrier protein; PFAM: Phosphopantetheine-binding
YP_006021178.1	KEGG: shw:Sputw3181_2440 3-oxoacyl-(acyl-carrier-protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_006021179.1	TIGRFAM: Malonyl CoA-acyl carrier protein transacylase; KEGG: shw:Sputw3181_2441 malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase
YP_006021180.1	PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: Beta-ketoacyl-acyl carrier protein synthase III (FabH); HAMAP: Beta-ketoacyl-acyl carrier protein synthase III (FabH); KEGG: shw:Sputw3181_2442 3-oxoacyl-(acyl carrier protein) synthase III
YP_006021181.1	TIGRFAM: Phospholipid biosynthesis protein, PlsX like; HAMAP: Phospholipid biosynthesis protein, PlsX like; KEGG: shw:Sputw3181_2443 putative glycerol-3-phosphate acyltransferase PlsX; PFAM: Fatty acid synthesis plsX protein
YP_006021182.1	TIGRFAM: Ribosomal protein L32p; HAMAP: Ribosomal protein L32p; KEGG: shw:Sputw3181_2444 50S ribosomal protein L32; PFAM: Ribosomal protein L32p
YP_006021183.1	PFAM: Protein of unknown function DUF177; KEGG: shw:Sputw3181_2445 hypothetical protein
YP_006021184.1	TIGRFAM: Maf-like protein; HAMAP: Maf-like protein; KEGG: shw:Sputw3181_2446 maf protein; PFAM: Maf-like protein
YP_006021185.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; KEGG: shw:Sputw3181_2447 HAD family hydrolase; PFAM: Haloacid dehalogenase-like hydrolase
YP_006021186.1	TIGRFAM: Pseudouridine synthase, RluC/RluD; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: shw:Sputw3181_2448 RluA family pseudouridine synthase; SMART: RNA-binding S4
YP_006021187.1	KEGG: shw:Sputw3181_2449 ribonuclease; TIGRFAM: Ribonuclease E/G; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; Ribosomal protein S1, RNA binding domain
YP_006021188.1	PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS; KEGG: shn:Shewana3_2568 sulphate transporter
YP_006021189.1	KEGG: shw:Sputw3181_2450 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein
YP_006021190.1	KEGG: shm:Shewmr7_2478 23S rRNA methyltransferase A; PFAM: Methyltransferase type 11
YP_006021191.1	KEGG: she:Shewmr4_2409 hypothetical protein
YP_006021192.1	PFAM: DinB; KEGG: maq:Maqu_1078 DinB family protein
YP_006021193.1	PFAM: Glutathione-dependent formaldehyde-activating, GFA; KEGG: syp:SYNPCC7002_G0119 glutathione-dependent formaldehyde activating enzyme
YP_006021194.1	PFAM: Sulfotransferase, Stf0; KEGG: sil:SPO3420 hypothetical protein
YP_006021195.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pen:PSEEN2698 hypothetical protein
YP_006021198.1	KEGG: shw:Sputw3181_2530 exonuclease I; PFAM: Exonuclease C-terminal; Exonuclease, RNase T/DNA polymerase III
YP_006021199.1	HAMAP: Cytidine deaminase, bacteria; KEGG: shw:Sputw3181_2531 cytidine deaminase; PFAM: Cytidine/deoxycytidylate deaminase, zinc-binding region; CMP/dCMP deaminase, zinc-binding
YP_006021200.1	KEGG: shw:Sputw3181_2532 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF1289
YP_006021201.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: shw:Sputw3181_2533 glyoxalase/bleomycin resistance protein/dioxygenase
YP_006021202.1	KEGG: she:Shewmr4_2414 hypothetical protein
YP_006021203.1	KEGG: son:SO_2795 glyoxalase family protein
YP_006021204.1	PFAM: Protein of unknown function DUF748; KEGG: shw:Sputw3181_2536 hypothetical protein
YP_006021205.1	PFAM: Glutaredoxin; KEGG: shn:Shewana3_2579 glutaredoxin
YP_006021206.1	KEGG: she:Shewmr4_2418 hypothetical protein
YP_006021207.1	KEGG: she:Shewmr4_2419 putative lipoprotein
YP_006021208.1	KEGG: shn:Shewana3_2582 hypothetical protein; HAMAP: UPF0434 protein ycaR; PFAM: Protein of unknown function DUF343
YP_006021209.1	PFAM: Tetraacyldisaccharide 4'-kinase; TIGRFAM: Tetraacyldisaccharide 4'-kinase; HAMAP: Tetraacyldisaccharide 4'-kinase; KEGG: shw:Sputw3181_2541 tetraacyldisaccharide 4'-kinase
YP_006021210.1	SMART: ATPase, AAA+ type, core; TIGRFAM: ABC transporter, lipid A export, MsbA; KEGG: shw:Sputw3181_2542 lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; PFAM: ABC transporter-like; ABC transporter, transmembrane region
YP_006021211.1	manually curated; TIGRFAM: Competence protein ComEC/Rec2; ComEC/Rec2-related protein; KEGG: shw:Sputw3181_2543 DNA internalization-related competence protein ComEC/Rec2; PFAM: ComEC/Rec2-related protein
YP_006021212.1	PFAM: Protein of unknown function DUF2062; KEGG: son:SO_2804 hypothetical protein
YP_006021213.1	PFAM: NnrS; KEGG: shn:Shewana3_2587 NnrS family protein
YP_006021214.1	PFAM: Phosphate-starvation-inducible E; KEGG: shn:Shewana3_2588 phosphate-starvation-inducible E
YP_006021215.1	PFAM: Type IV pilus assembly PilZ; KEGG: son:SO_2807 hypothetical protein
YP_006021216.1	KEGG: shn:Shewana3_2590 hypothetical protein
YP_006021217.1	KEGG: shm:Shewmr7_2499 RepA domain-containing protein
YP_006021218.1	KEGG: shm:Shewmr7_2500 hypothetical protein; TIGRFAM: putative metal-binding protein; PFAM: Protein of unknown function DUF2492
YP_006021219.1	PFAM: Signal transduction histidine kinase, internal region; Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region; GAF; ATP-binding region, ATPase-like; KEGG: shn:Shewana3_2593 signal transduction histidine kinase, LytS
YP_006021220.1	KEGG: shn:Shewana3_2594 putative two-component response-regulatory protein YehT; PFAM: Signal transduction response regulator, receiver region; LytTr DNA-binding region; SMART: Signal transduction response regulator, receiver region
YP_006021221.1	PFAM: Carbon starvation protein CstA; KEGG: shw:Sputw3181_2552 carbon starvation protein CstA
YP_006021222.1	PFAM: Protein of unknown function DUF2132; KEGG: shw:Sputw3181_2553 hypothetical protein
YP_006021223.1	KEGG: shw:Sputw3181_2554 hypothetical protein
YP_006021224.1	KEGG: shm:Shewmr7_2507 hypothetical protein
YP_006021225.1	PFAM: GTP cyclohydrolase II; TIGRFAM: GTP cyclohydrolase II; HAMAP: GTP cyclohydrolase-2; KEGG: shw:Sputw3181_2556 GTP cyclohydrolase II
YP_006021226.1	KEGG: shw:Sputw3181_2557 hypothetical protein
YP_006021227.1	TIGRFAM: Ribonucleoside-triphosphate reductase activating, anaerobic; KEGG: shw:Sputw3181_2558 anaerobic ribonucleotide reductase-activating protein
YP_006021228.1	TIGRFAM: Ribonucleoside-triphosphate reductase, anaerobic; KEGG: shw:Sputw3181_2559 anaerobic ribonucleoside triphosphate reductase; PFAM: Formate C-acetyltransferase glycine radical; ATP-cone
YP_006021229.1	KEGG: shw:Sputw3181_2560 hypothetical protein
YP_006021230.1	KEGG: spl:Spea_2621 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR
YP_006021231.1	KEGG: swp:swp_3169 zinc-containing alcohol dehydrogenase superfamily; PFAM: Alcohol dehydrogenase, zinc-binding
YP_006021232.1	PFAM: Patatin; KEGG: shw:Sputw3181_2561 patatin
YP_006021233.1	KEGG: shw:Sputw3181_2562 DEAD/DEAH box helicase domain-containing protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal
YP_006021234.1	KEGG: shw:Sputw3181_2563 hypothetical protein
YP_006021235.1	PFAM: Protein of unknown function DUF45; KEGG: shw:Sputw3181_2564 hypothetical protein
YP_006021236.1	KEGG: shw:Sputw3181_2565 hypothetical protein
YP_006021237.1	PFAM: Peptidase M23; KEGG: shw:Sputw3181_2566 peptidase M23B
YP_006021238.1	PFAM: RecF/RecN/SMC protein, N-terminal; KEGG: spc:Sputcn32_1532 SMC domain-containing protein
YP_006021239.1	KEGG: shw:Sputw3181_2568 nuclease SbcCD, D subunit; TIGRFAM: Exonuclease SbcD; PFAM: Metallophosphoesterase
YP_006021240.1	PFAM: Protein of unknown function DUF81; KEGG: shw:Sputw3181_2569 hypothetical protein
YP_006021241.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: shw:Sputw3181_2570 LysR family transcriptional regulator
YP_006021242.1	PFAM: Protein of unknown function DUF1260; KEGG: spc:Sputcn32_1528 hypothetical protein
YP_006021243.1	KEGG: shw:Sputw3181_2573 RNA-binding S4 domain-containing protein
YP_006021244.1	PFAM: GCN5-related N-acetyltransferase; KEGG: shw:Sputw3181_2574 GCN5-related N-acetyltransferase
YP_006021245.1	PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; KEGG: shw:Sputw3181_2575 PpiC-type peptidyl-prolyl cis-trans isomerase
YP_006021246.1	PFAM: Protein of unknown function DUF885, bacterial; KEGG: shn:Shewana3_2619 hypothetical protein
YP_006021247.1	KEGG: son:SO_1830 GGDEF domain-containing protein; PFAM: Diguanylate cyclase, predicted; SMART: Diguanylate cyclase, predicted
YP_006021248.1	PFAM: Tetratricopeptide TPR-1; KEGG: shn:Shewana3_2621 TPR repeat-containing protein
YP_006021249.1	KEGG: shw:Sputw3181_2579 TonB family protein; TIGRFAM: TonB, C-terminal; PFAM: Gram-negative bacterial tonB protein
YP_006021250.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: shn:Shewana3_2623 biopolymer transport protein ExbD/TolR
YP_006021251.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: shw:Sputw3181_2581 MotA/TolQ/ExbB proton channel
YP_006021252.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: shn:Shewana3_2625 MotA/TolQ/ExbB proton channel
YP_006021253.1	KEGG: shw:Sputw3181_2583 hypothetical protein
YP_006021254.1	PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: shw:Sputw3181_2584 TonB-dependent receptor
YP_006021256.1	PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: pat:Patl_2993 TonB-dependent receptor
YP_006021257.1	PFAM: Porin, Gram-negative type; KEGG: shw:Sputw3181_2585 porin
YP_006021258.1	KEGG: shw:Sputw3181_2586 DNA polymerase II; PFAM: DNA-directed DNA polymerase, family B, conserved region; DNA-directed DNA polymerase, family B, exonuclease domain; SMART: DNA-directed DNA polymerase, family B
YP_006021259.1	SMART: Helicase, ATP-dependent, c2 type; KEGG: shm:Shewmr7_2538 ATP-dependent DNA helicase DinG
YP_006021260.1	PFAM: Protein of unknown function DUF81; KEGG: shw:Sputw3181_2588 hypothetical protein
YP_006021261.1	KEGG: shw:Sputw3181_2589 primosomal replication protein N'', putative
YP_006021262.1	KEGG: shn:Shewana3_2633 hypothetical protein; HAMAP: UPF0319 protein yccT; PFAM: Protein of unknown function DUF2057
YP_006021263.1	PFAM: Histone deacetylase superfamily; KEGG: son:SO_1815 histone deacetylase/AcuC/AphA family protein
YP_006021264.1	PFAM: Late competence development protein ComFB; KEGG: shw:Sputw3181_2592 hypothetical protein
YP_006021265.1	KEGG: she:Shewmr4_2476 helix-hairpin-helix repeat-containing competence protein ComEA; TIGRFAM: Competence protein ComEA, helix-hairpin-helix region; SMART: Helix-hairpin-helix DNA-binding motif, class 1
YP_006021266.1	TIGRFAM: Methionine gamma-lyase; KEGG: shw:Sputw3181_2594 methionine gamma-lyase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme
YP_006021267.1	KEGG: shw:Sputw3181_2595 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP01620; PFAM: Conserved hypothetical protein CHP01620
YP_006021268.1	PFAM: Protein of unknown function DUF463, YcjX-like protein; KEGG: spc:Sputcn32_1505 protein of unknown function DUF463, YcjX family protein
YP_006021269.1	KEGG: shw:Sputw3181_2597 phage shock protein C, PspC; TIGRFAM: Phage shock protein C; PFAM: PspC
YP_006021270.1	KEGG: son:SO_1808 phage shock protein B; TIGRFAM: Phage shock B; PFAM: Phage shock B
YP_006021271.1	KEGG: shw:Sputw3181_2599 phage shock protein A, PspA; TIGRFAM: Phage shock protein A; PFAM: PspA/IM30
YP_006021272.1	TIGRFAM: Transcription activator PspF; PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; KEGG: shw:Sputw3181_2600 fis family transcriptional regulator; SMART: ATPase, AAA+ type, core
YP_006021273.1	KEGG: spc:Sputcn32_1500 extracellular solute-binding protein; manually curated; PFAM: Bacterial extracellular solute-binding protein, family 5
YP_006021274.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: shn:Shewana3_2651 binding-protein-dependent transport systems inner membrane component
YP_006021275.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: shn:Shewana3_2652 binding-protein-dependent transport systems inner membrane component
YP_006021276.1	TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: son:SO_1802 peptide ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal
YP_006021277.1	PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; KEGG: shw:Sputw3181_2605 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_006021278.1	HAMAP: Uncharacterised protein family, TER reductase; KEGG: shw:Sputw3181_2606 trans-2-enoyl-CoA reductase; PFAM: Uncharacterised protein family, TER reductase
YP_006021279.1	KEGG: shn:Shewana3_2656 molybdenum-pterin binding; TIGRFAM: Molybdenum-pterin binding; PFAM: Transport-associated OB, type 1
YP_006021280.1	PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; SurA N-terminal; KEGG: shn:Shewana3_2657 PpiC-type peptidyl-prolyl cis-trans isomerase
YP_006021281.1	KEGG: shw:Sputw3181_2608 histone family protein DNA-binding protein; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein
YP_006021282.1	SMART: Peptidase S16, lon N-terminal; ATPase, AAA+ type, core; TIGRFAM: Peptidase S16, ATP-dependent protease La; KEGG: shw:Sputw3181_2609 ATP-dependent protease La; PFAM: Peptidase S16, lon C-terminal; Peptidase S16, lon N-terminal; ATPase, AAA-type, core
YP_006021283.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Clp protease, ATP-binding subunit ClpX; KEGG: shw:Sputw3181_2610 ATP-dependent protease ATP-binding subunit ClpX; HAMAP: Clp protease, ATP-binding subunit ClpX; PFAM: ATPase associated with various cellular activities, AAA-2; Zinc finger, C4-type; Clp ATPase, C-terminal
YP_006021284.1	PFAM: Peptidase S14, ClpP; TIGRFAM: Peptidase S14, ClpP; HAMAP: ATP-dependent Clp protease proteolytic subunit; KEGG: son:SO_1794 ATP-dependent Clp protease proteolytic subunit
YP_006021285.1	TIGRFAM: Trigger factor; HAMAP: Trigger factor; KEGG: shw:Sputw3181_2612 trigger factor; PFAM: Trigger factor, ribosome-binding, bacterial; Peptidyl-prolyl cis-trans isomerase, FKBP-type; Trigger factor, C-terminal, bacterial
YP_006021286.1	HAMAP: Tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: shw:Sputw3181_2613 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
YP_006021287.1	SMART: Cysteinyl-tRNA synthetase, class Ia, DALR; TIGRFAM: Cysteinyl-tRNA synthetase, class Ia; KEGG: shw:Sputw3181_2614 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase, class Ia, N-terminal; Cysteinyl-tRNA synthetase, class Ia, DALR
YP_006021288.1	KEGG: shw:Sputw3181_2615 peptidyl-prolyl cis-trans isomerase, cyclophilin type; PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type
YP_006021289.1	TIGRFAM: UDP-2,3-diacylglucosamine hydrolase; HAMAP: UDP-2,3-diacylglucosamine hydrolase; KEGG: shw:Sputw3181_2616 UDP-2,3-diacylglucosamine hydrolase; PFAM: Metallophosphoesterase
YP_006021290.1	PFAM: tRNA--hydroxylase; KEGG: shn:Shewana3_2667 tRNA hydroxylase
YP_006021291.1	PFAM: Protein of unknown function DUF1282; KEGG: she:Shewmr4_2502 hypothetical protein
YP_006021292.1	PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain; TIGRFAM: Glutaminyl-tRNA synthetase, class Ic; HAMAP: Glutaminyl-tRNA synthetase; KEGG: shw:Sputw3181_2619 glutaminyl-tRNA synthetase
YP_006021293.1	KEGG: shm:Shewmr7_2572 ferrous iron transport protein B; TIGRFAM: Ferrous iron transport protein B; Small GTP-binding protein; PFAM: Ferrous iron transport protein B, N-terminal; GTP-binding protein, HSR1-related; Nucleoside recognition; Ferrous iron transport protein B, C-terminal
YP_006021294.1	PFAM: Ferrous iron transporter, FeoA subunit; KEGG: shw:Sputw3181_2621 FeoA family protein
YP_006021295.1	KEGG: shn:Shewana3_2672 cytochrome c family protein; TIGRFAM: Decaheme cytochrome, c-type, DmsE; Doubled CXXCH motif; PFAM: Doubled CXXCH motif
YP_006021296.1	TIGRFAM: Decahaem-associated outer membrane protein, MtrB/PioB; KEGG: she:Shewmr4_2507 outer membrane protein, putative
YP_006021297.1	TIGRFAM: Decahaem cytochrome, c-type, OmcA/MtrC; KEGG: shn:Shewana3_2674 decaheme cytochrome c MtrF
YP_006021298.1	TIGRFAM: Decahaem cytochrome, c-type, OmcA/MtrC; KEGG: shn:Shewana3_2675 decaheme cytochrome c
YP_006021300.1	TIGRFAM: Decahaem cytochrome, c-type, OmcA/MtrC; KEGG: shn:Shewana3_2676 decaheme cytochrome c
YP_006021301.1	KEGG: son:SO_1777 decaheme cytochrome c MtrA; TIGRFAM: Decaheme cytochrome, c-type, DmsE; Doubled CXXCH motif; PFAM: Doubled CXXCH motif
YP_006021302.1	TIGRFAM: Decahaem-associated outer membrane protein, MtrB/PioB; KEGG: shw:Sputw3181_2625 outer membrane protein precursor MtrB
YP_006021303.1	KEGG: shw:Sputw3181_2626 hypothetical protein
YP_006021304.1	KEGG: shw:Sputw3181_2627 phage SPO1 DNA polymerase domain-containing protein
YP_006021305.1	PFAM: Putative sugar diacid recognition; KEGG: she:Shewmr4_2516 CdaR family transcriptional regulator
YP_006021306.1	PFAM: Catalase related subgroup; KEGG: shw:Sputw3181_2629 catalase domain-containing protein
YP_006021307.1	PFAM: Gluconate transporter; KEGG: shm:Shewmr7_2586 gluconate transporter
YP_006021308.1	TIGRFAM: Glycerate kinase; KEGG: spc:Sputcn32_1470 glycerate kinase; PFAM: Glycerate kinase
YP_006021309.1	TIGRFAM: putative pyridoxal-dependent aspartate 1-decarboxylase; KEGG: spc:Sputcn32_1469 pyridoxal-dependent decarboxylase; PFAM: Pyridoxal phosphate-dependent decarboxylase
YP_006021310.1	KEGG: swd:Swoo_0411 hypothetical protein
YP_006021311.1	KEGG: shw:Sputw3181_2636 hypothetical protein
YP_006021313.1	KEGG: spc:Sputcn32_1463 hypothetical protein
YP_006021314.1	KEGG: spc:Sputcn32_1461 hexapaptide repeat-containing transferase; PFAM: Bacterial transferase hexapeptide repeat
YP_006021315.1	KEGG: shw:Sputw3181_2642 AraC family transcriptional regulator; PFAM: AraC protein, arabinose-binding/dimerisation; Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_006021316.1	PFAM: AzlC-like; KEGG: shw:Sputw3181_2643 AzlC family protein
YP_006021317.1	PFAM: Branched-chain amino acid transport; KEGG: shw:Sputw3181_2644 branched-chain amino acid transport
YP_006021318.1	PFAM: Aerolysin/haemolysin/leukocidin toxin; KEGG: sdn:Sden_2258 aerolysin/hemolysin/leukocidin toxin
YP_006021319.1	KEGG: shw:Sputw3181_2645 helix-turn-helix, type 11 domain-containing protein
YP_006021320.1	PFAM: Bacterial transcription activator, effector binding; KEGG: shw:Sputw3181_2646 transcription activator, effector binding
YP_006021321.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: spc:Sputcn32_1455 glyoxalase/bleomycin resistance protein/dioxygenase
YP_006021322.1	PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, C-terminal; KEGG: shw:Sputw3181_2648 phosphoglucomutase/phosphomannomutase alpha/beta/subunit
YP_006021323.1	KEGG: shn:Shewana3_2709 hypothetical protein
YP_006021324.1	PFAM: Integral membrane protein TerC; KEGG: son:SO_1747 hypothetical protein
YP_006021325.1	KEGG: svo:SVI_3041 hypothetical protein
YP_006021326.1	KEGG: sdn:Sden_0945 amino acid/peptide transporter; TIGRFAM: Amino acid/peptide transporter; PFAM: Oligopeptide transporter
YP_006021327.1	manually curated; KEGG: shn:Shewana3_2711 hypothetical protein
YP_006021328.1	KEGG: spc:Sputcn32_1448 3-beta hydroxysteroid dehydrogenase/isomerase; PFAM: 3-beta hydroxysteroid dehydrogenase/isomerase
YP_006021329.1	PFAM: AMP-dependent synthetase/ligase; KEGG: shw:Sputw3181_2652 peptide synthase
YP_006021330.1	KEGG: shw:Sputw3181_2653 alpha/beta hydrolase fold; PFAM: Alpha/beta hydrolase fold-1
YP_006021331.1	PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; KEGG: shw:Sputw3181_2654 3-oxoacyl-(acyl carrier protein) synthase III
YP_006021332.1	KEGG: shw:Sputw3181_2655 hypothetical protein
YP_006021333.1	PFAM: Protein of unknown function DUF1289; KEGG: shm:Shewmr7_2617 hypothetical protein
YP_006021334.1	KEGG: shw:Sputw3181_2657 hypothetical protein; PFAM: HNH endonuclease; SMART: HNH nuclease
YP_006021335.1	KEGG: shw:Sputw3181_2658 choline/carnitine/betaine transporter; TIGRFAM: BCCT transporter; PFAM: BCCT transporter
YP_006021336.1	PFAM: Protein of unknown function DUF502; KEGG: shm:Shewmr7_2620 hypothetical protein
YP_006021337.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: shw:Sputw3181_2660 glyoxalase/bleomycin resistance protein/dioxygenase
YP_006021338.1	KEGG: eay:EAM_2113 phage protein
YP_006021339.1	KEGG: she:Shewmr4_2556 hypothetical protein
YP_006021340.1	KEGG: shw:Sputw3181_2662 transcriptional regulator PhoU; TIGRFAM: PhoU; PFAM: PhoU
YP_006021341.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Phosphate transport system permease protein 1; KEGG: shn:Shewana3_2732 phosphate transporter ATP-binding protein; PFAM: ABC transporter-like
YP_006021342.1	KEGG: she:Shewmr4_2559 phosphate ABC transporter, inner membrane subunit PstA; TIGRFAM: Phosphate transport system permease protein 2; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_006021343.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: shw:Sputw3181_2665 binding-protein-dependent transport systems inner membrane component
YP_006021344.1	PFAM: Amino acid-binding ACT; KEGG: spc:Sputcn32_1433 amino acid-binding ACT domain-containing protein
YP_006021345.1	PFAM: Protein of unknown function DUF6, transmembrane; KEGG: she:Shewmr4_2562 hypothetical protein
YP_006021346.1	PFAM: Putative esterase; KEGG: shn:Shewana3_2737 putative esterase
YP_006021347.1	KEGG: she:Shewmr4_2564 hypothetical protein
YP_006021348.1	KEGG: she:Shewmr4_2566 hypothetical protein
YP_006021349.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: shw:Sputw3181_2671 lysine exporter protein LysE/YggA
YP_006021350.1	PFAM: Protein of unknown function DUF1415; KEGG: spc:Sputcn32_1428 hypothetical protein
YP_006021351.1	KEGG: sfr:Sfri_3971 hypothetical protein
YP_006021352.1	PFAM: Beta-lactamase-related; KEGG: sus:Acid_1314 beta-lactamase
YP_006021354.1	KEGG: shn:Shewana3_2746 hypothetical protein
YP_006021355.1	PFAM: Acetyl-CoA hydrolase/transferase; KEGG: shw:Sputw3181_2677 acetyl-CoA hydrolase/transferase
YP_006021356.1	TIGRFAM: Peptidase S26A, signal peptidase I; KEGG: spl:Spea_1036 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region
YP_006021357.1	PFAM: ABC-2 type transporter; KEGG: spc:Sputcn32_1422 ABC-2 type transporter
YP_006021358.1	PFAM: ABC transporter-like; KEGG: spc:Sputcn32_1421 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_006021359.1	PFAM: Secretion protein HlyD; KEGG: shw:Sputw3181_2680 secretion protein HlyD family protein
YP_006021360.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: shw:Sputw3181_2681 TetR family transcriptional regulator
YP_006021361.1	KEGG: shw:Sputw3181_2682 hypothetical protein
YP_006021362.1	KEGG: shn:Shewana3_2753 hypothetical protein
YP_006021363.1	KEGG: spc:Sputcn32_1416 hypothetical protein
YP_006021364.1	PFAM: Signal transduction response regulator, C-terminal; KEGG: son:SO_1699 transcriptional regulator
YP_006021365.1	PFAM: Protein of unknown function DUF1888; KEGG: shn:Shewana3_2756 hypothetical protein
YP_006021366.1	KEGG: son:SO_1697 hypothetical protein
YP_006021367.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate cyclase, predicted; KEGG: shw:Sputw3181_2689 diguanylate cyclase with PAS/PAC sensor; SMART: Diguanylate cyclase, predicted; PAS
YP_006021368.1	PFAM: FAD linked oxidase, N-terminal; Berberine/berberine-like; KEGG: shw:Sputw3181_2690 FAD linked oxidase domain-containing protein
YP_006021369.1	PFAM: Protein of unknown function DUF6, transmembrane; KEGG: shn:Shewana3_2759 hypothetical protein
YP_006021370.1	PFAM: Lipocalin-like; KEGG: son:SO_1691 lipoprotein Blc
YP_006021371.1	KEGG: shw:Sputw3181_2692 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core
YP_006021372.1	TIGRFAM: ATPase, P type, cation/copper-transporter; ATPase, P-type, heavy metal translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: spc:Sputcn32_1408 copper-translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated region; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase
YP_006021373.1	KEGG: shm:Shewmr7_2655 MerR family transcriptional regulator; PFAM: Transcription regulator MerR, DNA binding; HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR
YP_006021374.1	KEGG: spc:Sputcn32_1406 peptidase S9 prolyl oligopeptidase
YP_006021375.1	KEGG: shw:Sputw3181_2696 hypothetical protein
YP_006021376.1	PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: spc:Sputcn32_1403 3-ketoacyl-(acyl-carrier-protein) reductase
YP_006021377.1	TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; KEGG: shw:Sputw3181_2699 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase, NAD-binding
YP_006021378.1	KEGG: spc:Sputcn32_1401 enoyl-CoA hydratase/isomerase; PFAM: Crotonase, core
YP_006021379.1	PFAM: Crotonase, core; KEGG: shw:Sputw3181_2701 enoyl-CoA hydratase
YP_006021380.1	KEGG: shw:Sputw3181_2702 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central region
YP_006021381.1	TIGRFAM: Methylmalonate-semialdehyde dehydrogenase; KEGG: spc:Sputcn32_1398 methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde dehydrogenase
YP_006021382.1	KEGG: spc:Sputcn32_1397 acetyl-CoA acetyltransferase; TIGRFAM: Thiolase
YP_006021384.1	KEGG: spc:Sputcn32_1396 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling
YP_006021385.1	PFAM: Homoserine O-succinyltransferase; TIGRFAM: Homoserine O-succinyltransferase; HAMAP: Homoserine O-succinyltransferase; KEGG: shw:Sputw3181_2706 homoserine O-succinyltransferase
YP_006021386.1	KEGG: spc:Sputcn32_1394 hypothetical protein
YP_006021387.1	PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: shw:Sputw3181_2708 short-chain dehydrogenase/reductase SDR
YP_006021388.1	PFAM: Outer membrane protein, OmpW; KEGG: shn:Shewana3_2775 outer membrane protein W
YP_006021389.1	PFAM: Protein of unknown function DUF925, bacterial; KEGG: spc:Sputcn32_1391 hypothetical protein
YP_006021390.1	TIGRFAM: Maleylacetoacetate isomerase; KEGG: shn:Shewana3_2777 maleylacetoacetate isomerase; PFAM: Glutathione S-transferase, C-terminal; Glutathione S-transferase, N-terminal
YP_006021391.1	PFAM: Fumarylacetoacetase, C-terminal-like; KEGG: spc:Sputcn32_1389 fumarylacetoacetate (FAA) hydrolase
YP_006021392.1	KEGG: spc:Sputcn32_1388 transcriptional regulator, TyrR; PFAM: RNA polymerase sigma factor 54, interaction; Amino acid-binding ACT; PAS fold; SMART: ATPase, AAA+ type, core
YP_006021393.1	KEGG: she:Shewmr4_2606 pterin-4-alpha-carbinolamine dehydratase; HAMAP: pterin-4-alpha-carbinolamine dehydratase; PFAM: Transcriptional coactivator/pterin dehydratase
YP_006021394.1	TIGRFAM: Phenylalanine-4-hydroxylase, monomeric form; KEGG: shm:Shewmr7_2674 phenylalanine 4-monooxygenase; PFAM: Aromatic amino acid hydroxylase, C-terminal
YP_006021395.1	TIGRFAM: UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal type; KEGG: shw:Sputw3181_2716 UTP-glucose-1-phosphate uridylyltransferase GalU; PFAM: Nucleotidyl transferase
YP_006021396.1	TIGRFAM: UDP-glucose 4-epimerase; KEGG: spc:Sputcn32_1384 UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase
YP_006021397.1	KEGG: shw:Sputw3181_2718 ferredoxin-type protein NapF; TIGRFAM: Ferredoxin-type protein NapF; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup
YP_006021398.1	PFAM: Protein of unknown function DUF583; KEGG: shw:Sputw3181_2719 hypothetical protein
YP_006021399.1	PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: spc:Sputcn32_1381 LysR family transcriptional regulator
YP_006021400.1	TIGRFAM: Decahaem cytochrome, c-type, OmcA/MtrC; KEGG: shn:Shewana3_2787 decaheme cytochrome c
YP_006021401.1	KEGG: shw:Sputw3181_2730 hypothetical protein
YP_006021402.1	PFAM: Protein of unknown function DUF218; KEGG: spc:Sputcn32_1372 hypothetical protein
YP_006021403.1	KEGG: shw:Sputw3181_2732 fructokinase; PFAM: ROK
YP_006021404.1	KEGG: shm:Shewmr7_2684 3'(2'),5'-bisphosphate nucleotidase; TIGRFAM: 3(2),5 -bisphosphate nucleotidase, bacterial; PFAM: Inositol monophosphatase
YP_006021405.1	TIGRFAM: dTDP-4-dehydrorhamnose reductase; KEGG: she:Shewmr4_2618 dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase
YP_006021406.1	HAMAP: hydrolase ycdX; PFAM: PHP, C-terminal; KEGG: shw:Sputw3181_2734 putative hydrolase; SMART: Polymerase/histidinol phosphatase, N-terminal
YP_006021407.1	KEGG: shw:Sputw3181_2735 SNF2-related protein; PFAM: SNF2-related; Zinc finger, SWIM-type; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal
YP_006021408.1	PFAM: Protein of unknown function DUF885, bacterial; KEGG: shn:Shewana3_2796 hypothetical protein
YP_006021409.1	KEGG: shw:Sputw3181_2737 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein
YP_006021410.1	KEGG: shn:Shewana3_2797 potassium efflux system protein; TIGRFAM: K+/H+ exchanger; PFAM: Cation/H+ exchanger; Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal
YP_006021411.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: she:Shewmr4_2624 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_006021412.1	TIGRFAM: Lysidine-tRNA(Ile) synthetase, N-terminal; Lysidine-tRNA(Ile) synthetase, C-terminal; HAMAP: tRNA(Ile)-lysidine synthase; KEGG: spc:Sputcn32_1364 tRNA(Ile)-lysidine synthetase; PFAM: Lysidine-tRNA(Ile) synthetase, substrate-binding domain; PP-loop
YP_006021413.1	SMART: Polymerase/histidinol phosphatase, N-terminal; TIGRFAM: DNA polymerase III, alpha subunit; KEGG: spc:Sputcn32_1363 DNA polymerase III subunit alpha; PFAM: Bacterial DNA polymerase III, alpha subunit; PHP, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type
YP_006021414.1	KEGG: shw:Sputw3181_2741 ribonuclease HII; PFAM: Ribonuclease HII/HIII
YP_006021415.1	PFAM: Glycosyl transferase, family 19; TIGRFAM: Glycosyl transferase, family 19; HAMAP: Lipid-A-disaccharide synthase; KEGG: shw:Sputw3181_2742 lipid-A-disaccharide synthase
YP_006021416.1	PFAM: Bacterial transferase hexapeptide repeat; TIGRFAM: Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; HAMAP: Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; KEGG: shn:Shewana3_2803 UDP-N-acetylglucosamine acyltransferase
YP_006021417.1	TIGRFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; HAMAP: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; KEGG: shm:Shewmr7_2697 (3R)-hydroxymyristoyl-ACP dehydratase; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ
YP_006021418.1	KEGG: shw:Sputw3181_2745 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region; Bacterial transferase hexapeptide repeat
YP_006021419.1	PFAM: Outer membrane chaperone Skp (OmpH); KEGG: shw:Sputw3181_2746 outer membrane chaperone Skp (OmpH)
YP_006021420.1	KEGG: shm:Shewmr7_2700 surface antigen (D15); TIGRFAM: Outer membrane assembly protein, YaeT; PFAM: Bacterial surface antigen (D15); Surface antigen variable number
YP_006021421.1	KEGG: shn:Shewana3_2808 peptidase RseP; TIGRFAM: Peptidase M50, putative membrane-associated zinc metallopeptidase; PFAM: Peptidase M50; PDZ/DHR/GLGF
YP_006021422.1	PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal; 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; HAMAP: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; KEGG: shw:Sputw3181_2749 1-deoxy-D-xylulose 5-phosphate reductoisomerase
YP_006021423.1	PFAM: Phosphatidate cytidylyltransferase; KEGG: shw:Sputw3181_2750 phosphatidate cytidylyltransferase
YP_006021424.1	PFAM: Di-trans-poly-cis-decaprenylcistransferase-like; TIGRFAM: Di-trans-poly-cis-decaprenylcistransferase-like; HAMAP: Undecaprenyl pyrophosphate synthase; KEGG: shw:Sputw3181_2751 undecaprenyl diphosphate synthase
YP_006021425.1	TIGRFAM: Ribosome recycling factor; HAMAP: Ribosome recycling factor, bacterial-like; KEGG: shw:Sputw3181_2752 ribosome recycling factor; PFAM: Ribosome recycling factor
YP_006021426.1	KEGG: shw:Sputw3181_2753 uridylate kinase; TIGRFAM: Uridylate kinase, bacteria; PFAM: Aspartate/glutamate/uridylate kinase
YP_006021427.1	TIGRFAM: Translation elongation factor EFTs/EF1B; HAMAP: Elongation factor Ts; KEGG: sdn:Sden_1555 elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B, dimerisation; Ubiquitin-associated/translation elongation factor EF1B, N-terminal
YP_006021428.1	KEGG: shw:Sputw3181_2755 30S ribosomal protein S2; TIGRFAM: Ribosomal protein S2, bacteria/mitochondria/plastid; PFAM: Ribosomal protein S2
YP_006021429.1	TIGRFAM: Peptidase M24A, methionine aminopeptidase, subfamily 1; KEGG: shw:Sputw3181_2756 methionine aminopeptidase; PFAM: Peptidase M24, structural domain
YP_006021430.1	SMART: Metal-dependent phosphohydrolase, HD region; TIGRFAM: Protein-PII uridylyltransferase; KEGG: shw:Sputw3181_2757 PII uridylyl-transferase; PFAM: PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase; Nucleotidyltransferase; Amino acid-binding ACT; Metal-dependent phosphohydrolase, HD region, subdomain
YP_006021431.1	TIGRFAM: 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; HAMAP: 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; KEGG: shn:Shewana3_2818 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase
YP_006021432.1	KEGG: shw:Sputw3181_2759 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; GAF; Cystathionine beta-synthase, core; SMART: Metal-dependent phosphohydrolase, HD region; GAF
YP_006021433.1	TIGRFAM: Formyltetrahydrofolate deformylase; KEGG: spc:Sputcn32_1343 formyltetrahydrofolate deformylase; PFAM: Formyl transferase, N-terminal; Amino acid-binding ACT
YP_006021434.1	KEGG: she:Shewmr4_2648 PTS system, glucose-like IIB subunint; TIGRFAM: Phosphotransferase system, glucose-like IIB component; PFAM: Phosphotransferase system, EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site
YP_006021435.1	PFAM: Flavodoxin/nitric oxide synthase; KEGG: shw:Sputw3181_2762 flavodoxin
YP_006021436.1	KEGG: shw:Sputw3181_2763 hypothetical protein
YP_006021437.1	PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: shm:Shewmr7_2717 tRNA pseudouridine synthase C
YP_006021438.1	PFAM: Protein of unknown function DUF446; KEGG: shw:Sputw3181_2765 hypothetical protein
YP_006021439.1	KEGG: shw:Sputw3181_2766 hypothetical protein
YP_006021440.1	KEGG: son:SO_1617 hypothetical protein
YP_006021443.1	KEGG: son:SO_1615 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF2253, membrane
YP_006021444.1	PFAM: GCN5-related N-acetyltransferase; KEGG: shw:Sputw3181_2768 GCN5-related N-acetyltransferase
YP_006021445.1	manually curated; KEGG: shw:Sputw3181_2769 hypothetical protein
YP_006021446.1	KEGG: son:SO_1612 hypothetical protein
YP_006021447.1	KEGG: shw:Sputw3181_2771 hypothetical protein
YP_006021448.1	PFAM: Uncharacterised conserved protein UCP029037; KEGG: spc:Sputcn32_1331 hypothetical protein
YP_006021449.1	KEGG: shw:Sputw3181_2773 SecY interacting protein Syd; HAMAP: Protein syd; PFAM: Syd
YP_006021450.1	TIGRFAM: Nitrile oxidoreductase, NADPH-dependent, YqcD; KEGG: spc:Sputcn32_1329 7-cyano-7-deazaguanine reductase; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase
YP_006021451.1	PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: son:SO_1607 LysR family transcriptional regulator
YP_006021452.1	KEGG: son:SO_1606 metallo-beta-lactamase superfamily protein
YP_006021453.1	KEGG: shn:Shewana3_2837 putative lipoprotein
YP_006021454.1	PFAM: 4'-phosphopantetheinyl transferase; KEGG: spc:Sputcn32_1328 4'-phosphopantetheinyl transferase
YP_006021455.1	KEGG: spc:Sputcn32_1327 transcriptional regulator, putative
YP_006021456.1	TIGRFAM: Polyketide-type polyunsaturated fatty acid synthase, PfaA; KEGG: shw:Sputw3181_2777 erythronolide synthase; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; Acyl transferase; Phosphopantetheine-binding; Polyketide synthase, KR
YP_006021457.1	TIGRFAM: Omega-3 polyunsaturated fatty acid synthase-like; KEGG: shw:Sputw3181_2778 omega-3 polyunsaturated fatty acid synthase PfaB
YP_006021458.1	KEGG: shw:Sputw3181_2779 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; Beta-ketoacyl synthase, C-terminal; Beta-ketoacyl synthase, N-terminal
YP_006021459.1	TIGRFAM: PfaD family protein; KEGG: shw:Sputw3181_2780 2-nitropropane dioxygenase, NPD
YP_006021460.1	PFAM: Protein of unknown function DUF1328; KEGG: shm:Shewmr7_2739 hypothetical protein
YP_006021461.1	KEGG: shw:Sputw3181_2782 hypothetical protein
YP_006021462.1	KEGG: shw:Sputw3181_2783 hypothetical protein; PFAM: Diacylglycerol kinase, catalytic region; Dual specificity phosphatase, catalytic domain; SMART: Dual specificity phosphatase, subgroup, catalytic domain; Diacylglycerol kinase, catalytic region
YP_006021463.1	KEGG: son:SO_1592 hypothetical protein
YP_006021464.1	PFAM: Major royal jelly-related; KEGG: cyp:PCC8801_3892 major royal jelly protein
YP_006021465.1	KEGG: shw:Sputw3181_2784 sigma-54 dependent trancsriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core
YP_006021466.1	KEGG: shw:Sputw3181_2785 hypothetical protein
YP_006021467.1	PFAM: Transport-associated; KEGG: shw:Sputw3181_2786 transport-associated
YP_006021468.1	KEGG: son:SO_1590 hypothetical protein
YP_006021469.1	KEGG: shw:Sputw3181_2787 hypothetical protein
YP_006021470.1	PFAM: Polysaccharide deacetylase; KEGG: swd:Swoo_0564 polysaccharide deacetylase
YP_006021471.1	KEGG: swp:swp_3712 TonB-dependent receptor; TIGRFAM: Bacterial TonB-dependent receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel
YP_006021472.1	PFAM: Tryptophan halogenase; KEGG: swp:swp_3710 NAD(FAD)-dependent dehydrogenase
YP_006021473.1	KEGG: swd:Swoo_0565 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_006021474.1	PFAM: Major facilitator superfamily MFS-1; KEGG: swd:Swoo_0563 major facilitator transporter
YP_006021475.1	PFAM: ROK; KEGG: swd:Swoo_0562 ROK family protein
YP_006021476.1	KEGG: swd:Swoo_0561 beta-N-acetylhexosaminidase; PFAM: Glycoside hydrolase, family 20, catalytic core; Carbohydrate-binding, chitobiase/hexosaminidase-type, N-terminal; Beta-N-acetylhexosaminidase-like; Glycoside hydrolase, family 20, C-terminal
YP_006021477.1	KEGG: shw:Sputw3181_2788 hypothetical protein
YP_006021478.1	PFAM: Protein of unknown function, inner membrane,YgjV; KEGG: son:SO_1587 hypothetical protein
YP_006021479.1	PFAM: Cyclic nucleotide-binding; KEGG: son:SO_1586 hypothetical protein
YP_006021480.1	PFAM: Fumarylacetoacetase, C-terminal-like; KEGG: shw:Sputw3181_2789 fumarylacetoacetate (FAA) hydrolase
YP_006021481.1	KEGG: shw:Sputw3181_2790 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_006021482.1	PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: shw:Sputw3181_2791 succinylglutamate desuccinylase/aspartoacylase
YP_006021483.1	KEGG: shw:Sputw3181_2792 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR
YP_006021484.1	PFAM: Major facilitator superfamily MFS-1; KEGG: shw:Sputw3181_2793 major facilitator superfamily transporter
YP_006021485.1	KEGG: shw:Sputw3181_2794 putative PhnA protein; PFAM: PhnA protein, C-terminal; PhnA protein, N-terminal; SMART: PhnA protein N-terminal, proteobacterial
YP_006021486.1	KEGG: spc:Sputcn32_1308 TonB-dependent heme/hemoglobin receptor family protein; TIGRFAM: TonB-dependent haem/haemoglobin receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel
YP_006021487.1	KEGG: shw:Sputw3181_2796 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02453; PFAM: Conserved hypothetical protein CHP02453
YP_006021488.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: son:SO_1578 TetR family transcriptional regulator
YP_006021489.1	PFAM: Glutathione S-transferase, C-terminal; Glutathione S-transferase, N-terminal; KEGG: shn:Shewana3_2865 glutathione S-transferase domain-containing protein
YP_006021490.1	PFAM: Glutathione S-transferase, N-terminal; Glutathione S-transferase, C-terminal; KEGG: shw:Sputw3181_2797 glutathione S-transferase domain-containing protein
YP_006021491.1	PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; KEGG: spc:Sputcn32_1305 Fmu (Sun) domain-containing protein
YP_006021492.1	KEGG: shw:Sputw3181_2799 hypothetical protein
YP_006021493.1	PFAM: Acetoacetate decarboxylase; KEGG: she:Shewmr4_2699 hypothetical protein
YP_006021494.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diverse 7TM receptor, transmembrane region; Diverse 7TM receptor, extracellular region 2; Diguanylate cyclase, predicted; KEGG: shn:Shewana3_2870 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_006021495.1	PFAM: Protein of unknown function DUF6, transmembrane; KEGG: shn:Shewana3_2871 hypothetical protein
YP_006021496.1	PFAM: YfaZ; KEGG: spc:Sputcn32_1303 YfaZ family protein
YP_006021497.1	PFAM: GCN5-related N-acetyltransferase; KEGG: spc:Sputcn32_1302 GCN5-related N-acetyltransferase
YP_006021498.1	manually curated; TIGRFAM: Divalent cation transporter; KEGG: she:Shewmr4_2704 MgtE intracellular region; PFAM: Magnesium transporter, MgtE intracellular region; Cystathionine beta-synthase, core; MgtE integral membrane region
YP_006021499.1	KEGG: shw:Sputw3181_2803 glutathione peroxidase; PFAM: Glutathione peroxidase
YP_006021500.1	KEGG: shw:Sputw3181_2804 peptidase M1, membrane alanine aminopeptidase; PFAM: Peptidase M1, membrane alanine aminopeptidase, N-terminal; Peptidase M1, leukotriene A4 hydrolase, aminopeptidase C-terminal
YP_006021501.1	TIGRFAM: Phosphate binding protein; KEGG: shm:Shewmr7_2775 phosphate binding protein
YP_006021502.1	SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; manually curated; KEGG: shw:Sputw3181_2806 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: Signal transduction histidine kinase, phosphate regulon sensor PhoR; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold
YP_006021503.1	TIGRFAM: Signal transduction response regulator, phosphate regulon transcriptional regulatory protein phoB; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; KEGG: shw:Sputw3181_2807 two component transcriptional regulator; SMART: Signal transduction response regulator, receiver region
YP_006021504.1	PFAM: Porin, Gram-negative type; KEGG: she:Shewmr4_2710 porin
YP_006021505.1	KEGG: shw:Sputw3181_2809 recombination associated protein; HAMAP: Recombination-associated protein rdgC; PFAM: Putative exonuclease, RdgC
YP_006021506.1	KEGG: shn:Shewana3_2882 peptidase M61 domain-containing protein; PFAM: Peptidase M61; SMART: PDZ/DHR/GLGF
YP_006021507.1	PFAM: Tetratricopeptide TPR-1; KEGG: shw:Sputw3181_2811 TPR repeat-containing protein
YP_006021508.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: shm:Shewmr7_2782 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_006021509.1	PFAM: Conserved hypothetical protein CHP00730; KEGG: shw:Sputw3181_2813 hypothetical protein
YP_006021510.1	HAMAP: Uncharacterized exonuclease xni; PFAM: 5'-3' exonuclease, SAM-fold domain; 5'-3' exonuclease, N-terminal resolvase-like domain; KEGG: spc:Sputcn32_1289 exonuclease IX; SMART: 5'-3' exonuclease, N-terminal; Helix-hairpin-helix motif, class 2
YP_006021511.1	KEGG: she:Shewmr4_2717 hypothetical protein
YP_006021512.1	KEGG: spc:Sputcn32_1287 peptidase S9 prolyl oligopeptidase
YP_006021514.1	KEGG: shw:Sputw3181_2820 isocitrate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase
YP_006021515.1	HAMAP: YdgE, putative RNA 2'-O-ribose methyltranserase; KEGG: shw:Sputw3181_2821 putative RNA 2'-O-ribose methyltransferase
YP_006021516.1	PFAM: Protein of unknown function DUF423; KEGG: shw:Sputw3181_2822 hypothetical protein
YP_006021517.1	KEGG: shw:Sputw3181_2823 hypothetical protein
YP_006021518.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: shw:Sputw3181_2824 DNA-binding transcriptional activator GcvA
YP_006021519.1	KEGG: shm:Shewmr7_2796 hypothetical protein
YP_006021520.1	TIGRFAM: Thiamine biosynthesis protein; HAMAP: Thiamine biosynthesis protein; KEGG: shw:Sputw3181_2826 thiamine biosynthesis protein ThiI; PFAM: Thiamine biosynthesis protein, C-terminal; THUMP
YP_006021521.1	PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: shn:Shewana3_2897 flagellar motor protein MotB
YP_006021522.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: shn:Shewana3_2898 flagellar motor protein PomA
YP_006021523.1	TIGRFAM: Exonuclease VII, small subunit; HAMAP: Exonuclease VII, small subunit; KEGG: shn:Shewana3_2899 exodeoxyribonuclease VII small subunit; PFAM: Exonuclease VII, small subunit
YP_006021524.1	KEGG: son:SO_1526 geranyltranstransferase; PFAM: Polyprenyl synthetase
YP_006021525.1	PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; TIGRFAM: Deoxyxylulose-5-phosphate synthase; HAMAP: Deoxyxylulose-5-phosphate synthase; KEGG: shw:Sputw3181_2831 1-deoxy-D-xylulose-5-phosphate synthase
YP_006021526.1	KEGG: shw:Sputw3181_2832 heat shock protein GrpE; HAMAP: GrpE nucleotide exchange factor; PFAM: GrpE nucleotide exchange factor
YP_006021527.1	PFAM: ATP-NAD/AcoX kinase; KEGG: shw:Sputw3181_2833 inorganic polyphosphate/ATP-NAD kinase
YP_006021528.1	PFAM: L-lactate permease; KEGG: shm:Shewmr7_2807 L-lactate permease
YP_006021529.1	KEGG: shn:Shewana3_2905 FAD linked oxidase domain-containing protein; PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup
YP_006021530.1	PFAM: Cysteine-rich region, CCG; KEGG: she:Shewmr4_2736 hypothetical protein
YP_006021531.1	PFAM: Protein of unknown function DUF162; KEGG: shw:Sputw3181_2837 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_006021532.1	PFAM: Protein of unknown function DUF162; KEGG: shw:Sputw3181_2838 hypothetical protein
YP_006021533.1	KEGG: spc:Sputcn32_1267 ATPase central domain-containing protein; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core
YP_006021535.1	KEGG: shm:Shewmr7_2813 hypothetical protein
YP_006021536.1	KEGG: son:SO_1508 hypothetical protein
YP_006021537.1	KEGG: shw:Sputw3181_2844 hypothetical protein
YP_006021539.1	PFAM: Multi antimicrobial extrusion protein MatE; KEGG: son:SO_1506 MATE efflux family protein
YP_006021540.1	PFAM: Major facilitator superfamily MFS-1; KEGG: shw:Sputw3181_2846 major facilitator superfamily transporter
YP_006021541.1	KEGG: shw:Sputw3181_2847 hypothetical protein
YP_006021542.1	KEGG: shw:Sputw3181_2848 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3
YP_006021543.1	PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; KEGG: shw:Sputw3181_2849 cobalamin synthesis protein, P47K
YP_006021544.1	KEGG: shw:Sputw3181_2850 DEAD/DEAH box helicase domain-containing protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal
YP_006021545.1	SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS; PAC motif; TIGRFAM: Diguanylate cyclase, predicted; PAS; KEGG: shw:Sputw3181_2851 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region; PAS fold-3; PAS fold
YP_006021546.1	KEGG: shw:Sputw3181_2852 starch synthase; PFAM: Starch synthase catalytic region; Glycosyl transferase, group 1
YP_006021547.1	PFAM: Nucleotidyl transferase; TIGRFAM: Glucose-1-phosphate adenylyltransferase; HAMAP: Glucose-1-phosphate adenylyltransferase; KEGG: shm:Shewmr7_2833 glucose-1-phosphate adenylyltransferase
YP_006021549.1	KEGG: shw:Sputw3181_2854 glycogen/starch/alpha-glucan phosphorylase; TIGRFAM: Glycogen/starch/alpha-glucan phosphorylase; PFAM: Glycosyl transferase, family 35
YP_006021550.1	SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; TIGRFAM: Glycogen debranching enzyme GlgX; KEGG: shw:Sputw3181_2855 glycogen debranching enzyme GlgX; PFAM: Glycoside hydrolase, family 13, N-terminal; Glycosyl hydrolase, family 13, catalytic region
YP_006021551.1	KEGG: shw:Sputw3181_2856 glycogen branching enzyme; PFAM: Alpha-amylase, C-terminal all beta; Glycosyl hydrolase, family 13, catalytic region; Glycoside hydrolase, family 13, N-terminal; TIGRFAM: 1,4-alpha-glucan branching enzyme, core region; HAMAP: 1,4-alpha-glucan branching enzyme, core region; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region
YP_006021552.1	TIGRFAM: Glycoside hydrolase, family 77; KEGG: shn:Shewana3_2935 4-alpha-glucanotransferase; PFAM: Glycoside hydrolase, family 77
YP_006021553.1	PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; KEGG: shn:Shewana3_2936 peptidyl-prolyl cis-trans isomerase, cyclophilin type
YP_006021554.1	KEGG: shw:Sputw3181_2859 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR
YP_006021555.1	KEGG: sse:Ssed_1117 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02001; PFAM: Conserved hypothetical protein CHP02001
YP_006021556.1	KEGG: swd:Swoo_1195 putative transporter, BCCT family protein
YP_006021557.1	TIGRFAM: Choline dehydrogenase; KEGG: svo:SVI_1654 choline dehydrogenase; PFAM: Glucose-methanol-choline oxidoreductase, N-terminal; Glucose-methanol-choline oxidoreductase, C-terminal
YP_006021558.1	TIGRFAM: Betaine aldehyde dehydrogenase; KEGG: sdn:Sden_0714 betaine aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase
YP_006021559.1	TIGRFAM: Transcriptional repressor BetI; HAMAP: HTH-type transcriptional regulator betI; KEGG: sdn:Sden_0713 transcriptional regulator BetI; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal
YP_006021560.1	KEGG: shw:Sputw3181_2860 iron-containing alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, iron-type
YP_006021561.1	KEGG: shw:Sputw3181_2861 hypothetical protein
YP_006021562.1	KEGG: shw:Sputw3181_2863 hypothetical protein
YP_006021563.1	PFAM: Thioesterase superfamily; KEGG: shw:Sputw3181_2864 thioesterase superfamily protein
YP_006021564.1	TIGRFAM: Isocitrate lyase; KEGG: shw:Sputw3181_2865 isocitrate lyase; PFAM: Isocitrate lyase/phosphorylmutase
YP_006021565.1	TIGRFAM: Malate synthase A; KEGG: shw:Sputw3181_2866 malate synthase; PFAM: Malate synthase-like, core
YP_006021566.1	PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; KEGG: shn:Shewana3_2944 TonB-dependent receptor
YP_006021567.1	KEGG: son:SO_1481 glutathione-regulated potassium-efflux system protein; TIGRFAM: K+/H+ exchanger; PFAM: Cation/H+ exchanger; Regulator of K+ conductance, N-terminal
YP_006021568.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: son:SO_1480 GGDEF family protein; SMART: Diguanylate cyclase, predicted
YP_006021569.1	KEGG: son:SO_1479 hypothetical protein
YP_006021570.1	PFAM: Tetrapyrrole methylase; KEGG: shn:Shewana3_2948 uroporphyrin-III C/tetrapyrrole methyltransferase
YP_006021571.1	PFAM: SmpA/OmlA; KEGG: son:SO_1476 small protein A
YP_006021572.1	KEGG: shn:Shewana3_2950 hypothetical protein; HAMAP: Protein rnfH; PFAM: Uncharacterised protein family UPF0125
YP_006021573.1	PFAM: Streptomyces cyclase/dehydrase; KEGG: shw:Sputw3181_2875 cyclase/dehydrase
YP_006021574.1	TIGRFAM: SsrA-binding protein; HAMAP: SsrA-binding protein; KEGG: shw:Sputw3181_2876 SsrA-binding protein; PFAM: SsrA-binding protein
YP_006021575.1	KEGG: shm:Shewmr7_3658 hypothetical protein
YP_006021576.1	KEGG: shw:Sputw3181_1294 DEAD/DEAH box helicase domain-containing protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal
YP_006021577.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold; PAS fold-4; KEGG: shn:Shewana3_1161 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS; PAC motif
YP_006021578.1	KEGG: shw:Sputw3181_1293 peptidase S16, lon domain-containing protein
YP_006021579.1	KEGG: spc:Sputcn32_2720 NADH:flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal
YP_006021580.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: shw:Sputw3181_1291 TetR family transcriptional regulator
YP_006021581.1	KEGG: shn:Shewana3_1157 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02922; PFAM: Conserved hypothetical protein CHP02922
YP_006021582.1	KEGG: spc:Sputcn32_2723 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; SMART: Chemotaxis methyl-accepting receptor, signalling
YP_006021583.1	KEGG: shw:Sputw3181_1288 hypothetical protein; HAMAP: Protein of unknown function DUF28; PFAM: Protein of unknown function DUF28
YP_006021584.1	PFAM: Carotenoid oxygenase; KEGG: sdn:Sden_3052 carotenoid oxygenase
YP_006021585.1	PFAM: Protein of unknown function DUF2141; KEGG: sdn:Sden_3053 hypothetical protein
YP_006021586.1	KEGG: shn:Shewana3_1153 putative signal transduction histidine kinase; PFAM: Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like
YP_006021587.1	KEGG: shn:Shewana3_1152 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal
YP_006021588.1	KEGG: ant:Arnit_2026 hypothetical protein
YP_006021589.1	KEGG: shw:Sputw3181_1287 sigma 54 modulation protein/ribosomal protein S30EA; TIGRFAM: Ribosomal protein S30Ae/sigma 54 modulation protein; PFAM: Ribosomal protein S30Ae/sigma 54 modulation protein
YP_006021590.1	TIGRFAM: PAS; PFAM: Chemotaxis methyl-accepting receptor, signalling; PAS fold-3; KEGG: shn:Shewana3_1150 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; SMART: Chemotaxis methyl-accepting receptor, signalling; PAC motif
YP_006021591.1	KEGG: shw:Sputw3181_1285 hypothetical protein
YP_006021592.1	KEGG: shw:Sputw3181_1284 PepSY-associated TM helix domain-containing protein
YP_006021593.1	KEGG: shw:Sputw3181_1283 hypothetical protein
YP_006021594.1	PFAM: Peroxiredoxin, OsmC-like protein; KEGG: shm:Shewmr7_1216 OsmC family protein
YP_006021595.1	KEGG: shm:Shewmr7_1215 hypothetical protein
YP_006021596.1	KEGG: spc:Sputcn32_2731 peptidase S41; PFAM: Peptidase S41; WD40-like Beta Propeller; SMART: Peptidase S41; PDZ/DHR/GLGF
YP_006021597.1	KEGG: spc:Sputcn32_2732 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3
YP_006021598.1	KEGG: shm:Shewmr7_1212 hypothetical protein
YP_006021599.1	TIGRFAM: Threonine synthase; KEGG: spc:Sputcn32_2733 threonine synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit
YP_006021600.1	KEGG: shw:Sputw3181_1278 homoserine kinase; TIGRFAM: Homoserine kinase; PFAM: GHMP kinase; GHMP kinase, C-terminal
YP_006021601.1	TIGRFAM: Aspartate kinase region; KEGG: shw:Sputw3181_1277 bifunctional aspartokinase I/homeserine dehydrogenase I; PFAM: Homoserine dehydrogenase, catalytic; Aspartate/glutamate/uridylate kinase; Amino acid-binding ACT; Aspartate/homoserine dehydrogenase, NAD-binding
YP_006021602.1	KEGG: shw:Sputw3181_1276 peptidylprolyl isomerase, FKBP-type; PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type
YP_006021603.1	KEGG: shn:Shewana3_1137 hypothetical protein
YP_006021604.1	KEGG: shn:Shewana3_1136 Trp operon repressor; TIGRFAM: Trp repressor, bacterial; PFAM: Trp repressor
YP_006021605.1	PFAM: Cytochrome c prime; KEGG: shn:Shewana3_1135 cytochrome c, class II
YP_006021606.1	KEGG: she:Shewmr4_1133 cytochrome b561
YP_006021607.1	KEGG: shn:Shewana3_1133 SSU ribosomal protein S30P / sigma 54 modulation protein; TIGRFAM: Ribosomal protein S30Ae/sigma 54 modulation protein; PFAM: Ribosomal protein S30Ae/sigma 54 modulation protein
YP_006021608.1	SMART: Chorismate mutase; TIGRFAM: Chorismate mutase, gammaproteobacteria; KEGG: spc:Sputcn32_1177 chorismate mutase; PFAM: Prephenate dehydratase; Chorismate mutase, type II
YP_006021609.1	PFAM: Cation/H+ exchanger; KEGG: shm:Shewmr7_2911 sodium/hydrogen exchanger
YP_006021610.1	KEGG: shn:Shewana3_3009 hypothetical protein
YP_006021611.1	KEGG: shm:Shewmr7_2913 oxidoreductase FAD-binding subunit; PFAM: Oxidoreductase FAD-binding region; Ferredoxin; Oxidoreductase FAD/NAD(P)-binding
YP_006021612.1	KEGG: shw:Sputw3181_2990 hydroxylamine reductase; TIGRFAM: Hybrid cluster protein; PFAM: Prismane
YP_006021613.1	TIGRFAM: Chorismate mutase, T-protein; KEGG: shw:Sputw3181_2991 bifunctional chorismate mutase/prephenate dehydrogenase; PFAM: Chorismate mutase, type II; Prephenate dehydrogenase
YP_006021614.1	TIGRFAM: DHAP synthase, class 1; KEGG: spc:Sputcn32_1172 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA
YP_006021615.1	TIGRFAM: Ribosomal protein L19; HAMAP: Ribosomal protein L19; KEGG: shw:Sputw3181_2993 50S ribosomal protein L19; PFAM: Ribosomal protein L19
YP_006021616.1	PFAM: tRNA (guanine-N1-)-methyltransferase; TIGRFAM: tRNA (guanine-N1-)-methyltransferase, bacteria; HAMAP: tRNA (guanine-N1-)-methyltransferase, bacteria; KEGG: shw:Sputw3181_2994 tRNA (guanine-N(1)-)-methyltransferase
YP_006021617.1	TIGRFAM: 16S rRNA processing protein RimM; HAMAP: 16S rRNA processing protein RimM; KEGG: shw:Sputw3181_2995 16S rRNA-processing protein RimM; PFAM: RimM protein; PRC-barrel
YP_006021618.1	TIGRFAM: Ribosomal protein S16; HAMAP: Ribosomal protein S16; KEGG: shw:Sputw3181_2996 30S ribosomal protein S16; PFAM: Ribosomal protein S16
YP_006021619.1	TIGRFAM: Signal recognition particle, SRP; PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, M-domain; Signal recognition particle, SRP54 subunit, helical bundle; KEGG: shw:Sputw3181_2997 signal recognition particle protein; SMART: ATPase, AAA+ type, core
YP_006021620.1	PFAM: Cytochrome c assembly protein; KEGG: shn:Shewana3_3019 cytochrome c assembly protein
YP_006021621.1	PFAM: Protein of unknown function DUF21; Cystathionine beta-synthase, core; Transporter-associated region; KEGG: shw:Sputw3181_2999 hypothetical protein
YP_006021622.1	KEGG: shw:Sputw3181_3000 hypothetical protein
YP_006021623.1	TIGRFAM: Holo-[acyl carrier protein] synthase; Phosphopantethiene-protein transferase; HAMAP: Holo-[acyl-carrier-protein] synthase; KEGG: shw:Sputw3181_3001 4'-phosphopantetheinyl transferase; PFAM: 4'-phosphopantetheinyl transferase
YP_006021624.1	TIGRFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; KEGG: spc:Sputcn32_1162 pyridoxine 5'-phosphate synthase; PFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ
YP_006021625.1	KEGG: shw:Sputw3181_3003 DNA repair protein RecO; TIGRFAM: Recombination protein O, RecO; PFAM: Recombination protein O, RecO
YP_006021626.1	KEGG: shw:Sputw3181_3004 GTP-binding protein Era; TIGRFAM: GTP-binding protein Era; Small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; K Homology, type 2
YP_006021627.1	KEGG: shw:Sputw3181_3005 ribonuclease III; PFAM: Ribonuclease III; Double-stranded RNA binding; TIGRFAM: Ribonuclease III, bacterial; HAMAP: Ribonuclease III, bacterial; SMART: Ribonuclease III; Double-stranded RNA binding
YP_006021628.1	KEGG: shn:Shewana3_3027 signal peptidase I; TIGRFAM: Peptidase S26A, signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; Peptidase S26, conserved region
YP_006021629.1	TIGRFAM: GTP-binding protein LepA; Small GTP-binding protein; HAMAP: GTP-binding protein lepA; KEGG: shw:Sputw3181_3007 GTP-binding protein LepA; PFAM: GTP-binding protein LepA, C-terminal; Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal
YP_006021630.1	PFAM: Positive regulator of sigma(E), RseC/MucC; KEGG: spc:Sputcn32_1156 positive regulator of sigma E, RseC/MucC
YP_006021631.1	PFAM: MucB/RseB; KEGG: shw:Sputw3181_3009 sigma E regulatory protein, MucB/RseB
YP_006021632.1	PFAM: Anti sigma-E protein RseA, N-terminal; Anti sigma-E protein RseA, C-terminal; KEGG: she:Shewmr4_2853 anti sigma-E protein, RseA
YP_006021633.1	KEGG: shw:Sputw3181_3011 RNA polymerase sigma factor RpoE; TIGRFAM: RNA polymerase sigma-70 RpoE type; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2
YP_006021634.1	TIGRFAM: L-aspartate oxidase; KEGG: shw:Sputw3181_3012 L-aspartate oxidase; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal
YP_006021635.1	manually curated; KEGG: shn:Shewana3_3034 hypothetical protein
YP_006021636.1	PFAM: Protein of unknown function DUF339; KEGG: son:SO_1339 hypothetical protein
YP_006021637.1	PFAM: HTH transcriptional regulator, LysR; KEGG: shn:Shewana3_3036 transcriptional activator NhaR
YP_006021638.1	KEGG: shn:Shewana3_3037 hypothetical protein
YP_006021639.1	TIGRFAM: Na+/H+ antiporter NhaA; HAMAP: Na+/H+ antiporter NhaA; KEGG: she:Shewmr4_2860 pH-dependent sodium/proton antiporter; PFAM: Na+/H+ antiporter NhaA
YP_006021640.1	TIGRFAM: Thymidylate synthase, C-terminal; KEGG: shw:Sputw3181_3018 thymidylate synthase; PFAM: Thymidylate synthase, C-terminal
YP_006021641.1	KEGG: shm:Shewmr7_2944 prolipoprotein diacylglyceryl transferase; TIGRFAM: Prolipoprotein diacylglyceryl transferase; PFAM: Prolipoprotein diacylglyceryl transferase
YP_006021642.1	PFAM: Protein of unknown function DUF81; KEGG: shm:Shewmr7_2945 hypothetical protein
YP_006021643.1	SMART: GAF; TIGRFAM: Phosphoenolpyruvate-protein phosphotransferase; KEGG: shw:Sputw3181_3021 phosphoenolpyruvate-protein phosphotransferase PtsP; PFAM: PEP-utilising enzyme; GAF; Phosphotransferase system, PEP-utilising enzyme, N-terminal; PEP-utilising enzyme, mobile region
YP_006021644.1	KEGG: shw:Sputw3181_3022 dinucleoside polyphosphate hydrolase; HAMAP: RNA pyrophosphohydrolase; PFAM: NUDIX hydrolase domain
YP_006021645.1	TIGRFAM: DNA mismatch repair protein MutH; HAMAP: DNA mismatch repair protein MutH; KEGG: shm:Shewmr7_2948 DNA mismatch repair protein; PFAM: DNA mismatch repair protein MutH, conserved region
YP_006021646.1	KEGG: shw:Sputw3181_3024 putative adenylate/guanylate cyclase
YP_006021647.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: shw:Sputw3181_3025 LysR family transcriptional regulator
YP_006021648.1	PFAM: Signal transduction histidine kinase, phosphotransfer (Hpt) region; KEGG: shn:Shewana3_3047 Hpt protein
YP_006021649.1	TIGRFAM: Conserved hypothetical protein CHP01212; PFAM: Radical SAM; KEGG: spc:Sputcn32_1137 putative radical SAM protein; SMART: Elongator protein 3/MiaB/NifB
YP_006021650.1	KEGG: shw:Sputw3181_3028 glutamate synthase subunit alpha; PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal
YP_006021651.1	TIGRFAM: Glutamate synthase, NADH/NADPH, small subunit 2; KEGG: spc:Sputcn32_1135 glutamate synthase subunit beta; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_006021652.1	PFAM: Nucleoside phosphorylase; TIGRFAM: MTA/SAH nucleosidase; HAMAP: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; KEGG: spc:Sputcn32_1134 adenosylhomocysteine nucleosidase
YP_006021653.1	PFAM: Cobalamin (vitamin B12) biosynthesis CbiB; KEGG: shn:Shewana3_3053 cobalamin biosynthesis protein CbiB
YP_006021654.1	KEGG: son:SO_1320 hypothetical protein
YP_006021655.1	PFAM: Uncharacterised protein family UPF0126; KEGG: shw:Sputw3181_3033 hypothetical protein
YP_006021656.1	KEGG: she:Shewmr4_2878 hypothetical protein
YP_006021657.1	KEGG: spc:Sputcn32_1129 hypothetical protein
YP_006021658.1	TIGRFAM: Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial; HAMAP: Tyrosyl-tRNA synthetase; KEGG: shw:Sputw3181_3036 tyrosyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ib
YP_006021659.1	PFAM: Peptidase M23; Opacity-associated protein A, N-terminal; KEGG: shw:Sputw3181_3037 peptidase M23B
YP_006021660.1	KEGG: shw:Sputw3181_3038 anhydro-N-acetylmuramic acid kinase; HAMAP: Anhydro-N-acetylmuramic acid kinase; PFAM: Anhydro-N-acetylmuramic acid kinase
YP_006021661.1	TIGRFAM: Aquaporin; HAMAP: Aquaporin Z; KEGG: shn:Shewana3_3064 aquaporin Z; PFAM: Major intrinsic protein
YP_006021662.1	KEGG: shw:Sputw3181_3039 hypothetical protein
YP_006021663.1	KEGG: she:Shewmr4_2888 hypothetical protein
YP_006021664.1	TIGRFAM: FeS cluster insertion; HAMAP: Iron--sulfur cluster insertion protein erpA; KEGG: shw:Sputw3181_3041 iron-sulfur cluster insertion protein ErpA; PFAM: FeS cluster biogenesis
YP_006021665.1	KEGG: she:Shewmr4_2890 hypothetical protein
YP_006021666.1	PFAM: Chloride channel, voltage gated; KEGG: shw:Sputw3181_3043 Cl-channel, voltage-gated family protein
YP_006021667.1	TIGRFAM: Aspartate carbamoyltransferase, eukaryotic; KEGG: shw:Sputw3181_3044 aspartate carbamoyltransferase; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region
YP_006021668.1	TIGRFAM: Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase; KEGG: shw:Sputw3181_3045 glutamate-1-semialdehyde aminotransferase; PFAM: Aminotransferase class-III
YP_006021669.1	KEGG: shn:Shewana3_3072 hypothetical protein
YP_006021670.1	PFAM: Divalent ion symporter; KEGG: shn:Shewana3_3073 citrate transporter
YP_006021671.1	KEGG: shm:Shewmr7_2977 general secretion pathway protein B
YP_006021672.1	KEGG: shw:Sputw3181_3048 peptidoglycan binding domain-containing protein; PFAM: Peptidoglycan binding-like; SMART: ATPase, AAA+ type, core
YP_006021673.1	HAMAP: Multifunctional CCA protein; KEGG: shn:Shewana3_3076 metal dependent phosphohydrolase; PFAM: Polynucleotide adenylyltransferase region; Metal-dependent phosphohydrolase, HD region, subdomain
YP_006021674.1	KEGG: shw:Sputw3181_3050 major outer membrane lipoprotein, putative
YP_006021675.1	KEGG: shw:Sputw3181_3051 ribosomal RNA large subunit methyltransferase A, putative
YP_006021676.1	TIGRFAM: Bacitracin resistance protein BacA; HAMAP: Undecaprenyl-diphosphatase; KEGG: son:SO_1293 undecaprenyl pyrophosphate phosphatase; PFAM: Bacitracin resistance protein BacA
YP_006021677.1	KEGG: shw:Sputw3181_3053 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; PFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK
YP_006021678.1	KEGG: son:SO_1291 dihydroneopterin aldolase; TIGRFAM: Dihydroneopterin aldolase; Dihydroneopterin aldolase subgroup; PFAM: Dihydroneopterin aldolase
YP_006021679.1	TIGRFAM: Membrane protein YgiH; HAMAP: Protein of unknown function DUF205; KEGG: shn:Shewana3_3082 putative glycerol-3-phosphate acyltransferase PlsY; PFAM: Protein of unknown function DUF205
YP_006021680.1	PFAM: Peptidase M22, glycoprotease; TIGRFAM: putative glycoprotease GCP; Peptidase M22, glycoprotease, subgroup; HAMAP: O-sialoglycoprotein endopeptidase; KEGG: shn:Shewana3_3083 putative DNA-binding/iron metalloprotein/AP endonuclease
YP_006021681.1	TIGRFAM: Ribosomal protein S21; HAMAP: Ribosomal protein S21; KEGG: shl:Shal_1007 30S ribosomal protein S21; PFAM: Ribosomal protein S21
YP_006021682.1	KEGG: shw:Sputw3181_3058 GatB/YqeY domain-containing protein
YP_006021683.1	KEGG: shw:Sputw3181_3059 DNA primase; TIGRFAM: DNA primase, DnaG; PFAM: DNA primase, catalytic core, N-terminal; Zinc finger, CHC2-type; Toprim domain; DNA primase, DnaB-helicase binding domain; DNA primase DnaG, DnaB-binding
YP_006021684.1	KEGG: shw:Sputw3181_3060 RpoD family RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor RpoD, C-terminal; RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, non-essential region; RNA polymerase sigma factor 70, region 1.1; RNA polymerase sigma-70 region 1.2; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 3; RNA polymerase sigma-70 region 4
YP_006021685.1	KEGG: shw:Sputw3181_3061 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_006021686.1	PFAM: ROK; KEGG: sfr:Sfri_1321 fructokinase
YP_006021687.1	PFAM: Glycoside hydrolase, family 3, N-terminal; Glycoside hydrolase, family 3, C-terminal; KEGG: sfr:Sfri_1318 beta-glucosidase
YP_006021688.1	KEGG: swd:Swoo_1148 glucose/galactose transporter; TIGRFAM: Bacterial glucose/galactose transporter; PFAM: Major facilitator superfamily MFS-1
YP_006021689.1	TIGRFAM: Glycoside hydrolase, family 1, beta-glucosidase; KEGG: sdn:Sden_2607 beta-glucosidase; PFAM: Glycoside hydrolase, family 1
YP_006021690.1	KEGG: sfr:Sfri_1315 sugar (glycoside-pentoside-hexuronide) transporter; TIGRFAM: Sodium:galactoside symporter; PFAM: Major facilitator superfamily MFS-1
YP_006021691.1	KEGG: sdn:Sden_2609 periplasmic binding protein/LacI transcriptional regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI
YP_006021693.1	KEGG: swd:Swoo_1144 TonB-dependent receptor; TIGRFAM: Bacterial TonB-dependent receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel
YP_006021694.1	PFAM: Tryptophan halogenase; KEGG: sfr:Sfri_1312 tryptophan halogenase
YP_006021695.1	PFAM: SapC; KEGG: sfr:Sfri_1311 SapC family protein
YP_006021696.1	SMART: Transcription factor jumonji/aspartyl beta-hydroxylase; KEGG: sfr:Sfri_1310 transcription factor jumonji domain-containing protein
YP_006021697.1	PFAM: Tryptophan halogenase; KEGG: sfr:Sfri_1309 tryptophan halogenase
YP_006021698.1	KEGG: sfr:Sfri_1308 hypothetical protein
YP_006021699.1	KEGG: shw:Sputw3181_3062 amino acid/peptide transporter; TIGRFAM: Amino acid/peptide transporter; PFAM: Oligopeptide transporter
YP_006021700.1	KEGG: spc:Sputcn32_1101 luciferase family protein; TIGRFAM: Luciferase family oxidoreductase, group 1; PFAM: Luciferase-like, subgroup
YP_006021701.1	TIGRFAM: 4-aminobutyrate aminotransferase, bacterial; KEGG: shw:Sputw3181_3064 4-aminobutyrate aminotransferase; PFAM: Aminotransferase class-III
YP_006021702.1	TIGRFAM: Succinic semialdehyde dehydrogenase; KEGG: shw:Sputw3181_3065 succinic semialdehyde dehydrogenase; PFAM: Aldehyde dehydrogenase
YP_006021703.1	PFAM: FAD dependent oxidoreductase; KEGG: spc:Sputcn32_1098 FAD dependent oxidoreductase
YP_006021704.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: shw:Sputw3181_3067 binding-protein-dependent transport systems inner membrane component
YP_006021705.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: shm:Shewmr7_2998 binding-protein-dependent transport systems inner membrane component
YP_006021706.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Spermidine/putrescine ABC transporter ATP-binding subunit; KEGG: shw:Sputw3181_3069 spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter-like; Transport-associated OB, type 2
YP_006021707.1	PFAM: Bacterial extracellular solute-binding, family 1; KEGG: shm:Shewmr7_3000 extracellular solute-binding protein
YP_006021708.1	KEGG: shw:Sputw3181_3071 glutamate--ammonia ligase; PFAM: Glutamine synthetase, catalytic region
YP_006021709.1	KEGG: shn:Shewana3_3099 peptidase C26; PFAM: Peptidase C26
YP_006021710.1	KEGG: shn:Shewana3_3100 XRE family transcriptional regulator; PFAM: Cupin 2, conserved barrel; Helix-turn-helix type 3; SMART: Helix-turn-helix type 3
YP_006021711.1	PFAM: FAD dependent oxidoreductase; KEGG: shw:Sputw3181_3074 FAD dependent oxidoreductase
YP_006021712.1	KEGG: spc:Sputcn32_1089 hypothetical protein
YP_006021713.1	PFAM: Rhodanese-like; KEGG: spc:Sputcn32_1088 3-mercaptopyruvate sulfurtransferase; SMART: Rhodanese-like
YP_006021714.1	KEGG: spc:Sputcn32_1087 rare lipoprotein A; TIGRFAM: Rare lipoprotein A, bacterial; PFAM: Rare lipoprotein A
YP_006021715.1	KEGG: vch:VCA0433 hypothetical protein
YP_006021716.1	PFAM: NERD; DNA topoisomerase, type IA, zn finger; KEGG: saz:Sama_0313 DNA topoisomerase I
YP_006021718.1	KEGG: spl:Spea_3460 hypothetical protein
YP_006021719.1	KEGG: sfr:Sfri_4014 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911
YP_006021720.1	PFAM: Aldehyde dehydrogenase; KEGG: shw:Sputw3181_3079 aldehyde dehydrogenase
YP_006021721.1	KEGG: shw:Sputw3181_3080 beta alanine--pyruvate transaminase; PFAM: Aminotransferase class-III
YP_006021722.1	TIGRFAM: Methylmalonate-semialdehyde dehydrogenase; KEGG: shw:Sputw3181_3081 methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde dehydrogenase
YP_006021723.1	PFAM: Protein of unknown function DUF861, cupin-3; KEGG: shw:Sputw3181_3082 protein of unknown function DUF861, cupin_3
YP_006021724.1	KEGG: shn:Shewana3_3109 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02001; PFAM: Conserved hypothetical protein CHP02001
YP_006021725.1	KEGG: shw:Sputw3181_3084 glucose/galactose transporter; TIGRFAM: Bacterial glucose/galactose transporter; PFAM: Major facilitator superfamily MFS-1
YP_006021726.1	PFAM: Protein of unknown function DUF2261, transmembrane; KEGG: spc:Sputcn32_1079 hypothetical protein
YP_006021727.1	TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; KEGG: shw:Sputw3181_3087 N-acetylglucosamine-6-phosphate deacetylase; PFAM: Amidohydrolase 1
YP_006021728.1	KEGG: spc:Sputcn32_1077 glutamine--fructose-6-phosphate transaminase (isomerizing); PFAM: Sugar isomerase (SIS)
YP_006021729.1	PFAM: ATPase, BadF/BadG/BcrA/BcrD type; KEGG: shw:Sputw3181_3089 ATPase, BadF/BadG/BcrA/BcrD type
YP_006021730.1	KEGG: shn:Shewana3_3115 beta-N-acetylhexosaminidase; PFAM: Glycoside hydrolase, family 20, catalytic core; Carbohydrate-binding, chitobiase/hexosaminidase-type, N-terminal; Beta-N-acetylhexosaminidase-like; Glycoside hydrolase, family 20, C-terminal
YP_006021731.1	KEGG: shn:Shewana3_3116 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_006021732.1	KEGG: shn:Shewana3_3117 hypothetical protein
YP_006021734.1	PFAM: Protein of unknown function DUF81; KEGG: shm:Shewmr7_3021 hypothetical protein
YP_006021735.1	PFAM: Tryptophan halogenase; KEGG: fbl:Fbal_2924 tryptophan halogenase
YP_006021736.1	PFAM: Tryptophan halogenase; KEGG: fbl:Fbal_2925 tryptophan halogenase
YP_006021737.1	PFAM: SapC; KEGG: sfr:Sfri_2877 SapC family protein
YP_006021738.1	KEGG: fbl:Fbal_2927 TonB-dependent receptor; TIGRFAM: Bacterial TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug
YP_006021739.1	KEGG: shw:Sputw3181_3092 regulatory protein, LacI; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI
YP_006021740.1	KEGG: shm:Shewmr7_3026 NADH dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_006021741.1	PFAM: Nitrogen regulatory protein PII; KEGG: saz:Sama_0935 nitrogen regulatory protein P-II
YP_006021742.1	KEGG: son:SO_3520 type IV pilus biogenesis protein, putative
YP_006021743.1	KEGG: son:SO_3521 type IV pilus biogenesis protein, putative
YP_006021744.1	KEGG: son:SO_3523 hypothetical protein
YP_006021745.1	KEGG: son:SO_3524 type IV pilus biogenesis protein PilE
YP_006021746.1	KEGG: shn:Shewana3_3129 type IV pilin biogenesis protein, putative
YP_006021747.1	KEGG: son:SO_3526 hypothetical protein
YP_006021748.1	KEGG: son:SO_3527 hypothetical protein
YP_006021749.1	TIGRFAM: Pilus modification type IV, PilV; Prepilin-type cleavage/methylation, N-terminal; KEGG: son:SO_3528 hypothetical protein
YP_006021750.1	PFAM: LytB protein; TIGRFAM: LytB protein; HAMAP: LytB protein; KEGG: shw:Sputw3181_3103 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
YP_006021751.1	KEGG: shw:Sputw3181_3104 peptidylprolyl isomerase, FKBP-type
YP_006021752.1	TIGRFAM: Peptidase A8, signal peptidase II; KEGG: shw:Sputw3181_3105 lipoprotein signal peptidase; PFAM: Peptidase A8, signal peptidase II
YP_006021753.1	TIGRFAM: Isoleucyl-tRNA synthetase, class Ia; HAMAP: Isoleucyl-tRNA synthetase; KEGG: spc:Sputcn32_1059 isoleucyl-tRNA synthetase
YP_006021754.1	TIGRFAM: Riboflavin kinase/FAD synthetase; KEGG: spc:Sputcn32_1058 riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflavin kinase
YP_006021755.1	manually curated; TIGRFAM: Flagellin assembly, membrane protein MviN; KEGG: shw:Sputw3181_3108 integral membrane protein MviN; PFAM: Flagellin assembly, membrane protein MviN
YP_006021756.1	manually curated; KEGG: shn:Shewana3_3139 hypothetical protein
YP_006021757.1	TIGRFAM: Ribosomal protein S20; HAMAP: Ribosomal protein S20; KEGG: shw:Sputw3181_3109 30S ribosomal protein S20; PFAM: Ribosomal protein S20
YP_006021758.1	KEGG: shw:Sputw3181_3110 regulatory protein, ArsR; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR
YP_006021759.1	PFAM: Peptidase M28; KEGG: she:Shewmr4_2962 peptidase M28
YP_006021760.1	KEGG: shm:Shewmr7_3045 hypothetical protein; HAMAP: UPF0246 protein yaaA; PFAM: Protein of unknown function DUF328
YP_006021761.1	KEGG: shw:Sputw3181_3113 amino acid carrier protein; TIGRFAM: Sodium:alanine symporter; PFAM: Sodium:alanine symporter
YP_006021762.1	KEGG: shw:Sputw3181_3114 putative phosphoketolase; PFAM: Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal; Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase; Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal
YP_006021763.1	PFAM: Outer membrane protein, OmpA/MotB, C-terminal; Outer membrane protein, OmpA-like, transmembrane region; KEGG: son:SO_3545 OmpA family protein
YP_006021764.1	TIGRFAM: Transaldolase AB; HAMAP: Transaldolase; KEGG: she:Shewmr4_2967 transaldolase B; PFAM: Transaldolase
YP_006021765.1	HAMAP: Phosphoglucose isomerase (PGI); KEGG: shw:Sputw3181_3117 glucose-6-phosphate isomerase; PFAM: Phosphoglucose isomerase (PGI)
YP_006021766.1	KEGG: shn:Shewana3_3149 hypothetical protein
YP_006021767.1	PFAM: Haemerythrin/HHE cation-binding motif; KEGG: shw:Sputw3181_3119 hemerythrin HHE cation binding domain-containing protein
YP_006021768.1	KEGG: son:SO_3550 hypothetical protein
YP_006021769.1	KEGG: shw:Sputw3181_3121 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2
YP_006021770.1	KEGG: shw:Sputw3181_3122 von Willebrand factor, type A; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A
YP_006021771.1	KEGG: spc:Sputcn32_1042 putative sulfate transporter YchM; TIGRFAM: Sulphate anion transporter; PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS
YP_006021772.1	TIGRFAM: 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; KEGG: shn:Shewana3_3155 phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase
YP_006021773.1	TIGRFAM: Phosphoribosylaminoimidazole carboxylase, ATPase subunit; KEGG: son:SO_3555 phosphoribosylaminoimidazole carboxylase ATPase subunit; PFAM: ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type
YP_006021774.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; GAF; KEGG: shm:Shewmr7_3059 diguanylate cyclase with GAF sensor; SMART: Diguanylate cyclase, predicted; GAF
YP_006021775.1	KEGG: shm:Shewmr7_3060 hypothetical protein
YP_006021776.1	KEGG: shn:Shewana3_3159 hypothetical protein
YP_006021777.1	TIGRFAM: Glutamate--cysteine ligase, monofunctional; HAMAP: Glutamate--cysteine ligase; KEGG: shw:Sputw3181_3129 glutamate--cysteine ligase; PFAM: Glutamate--cysteine ligase
YP_006021778.1	PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; KEGG: shn:Shewana3_3161 peptidase M16 domain-containing protein
YP_006021779.1	KEGG: she:Shewmr4_2982 hypothetical protein
YP_006021780.1	PFAM: Sodium:dicarboxylate symporter; KEGG: shw:Sputw3181_3132 sodium:dicarboxylate symporter
YP_006021781.1	KEGG: shw:Sputw3181_3133 hypothetical protein
YP_006021782.1	TIGRFAM: Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit; KEGG: shm:Shewmr7_3067 sodium ion-translocating decarboxylase, beta subunit; PFAM: Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit
YP_006021783.1	TIGRFAM: Oxaloacetate decarboxylase, alpha subunit; KEGG: shw:Sputw3181_3135 oxaloacetate decarboxylase; PFAM: Conserved carboxylase region; Pyruvate carboxyltransferase; Biotin/lipoyl attachment
YP_006021784.1	TIGRFAM: Sodium ion-translocating decarboxylase; HAMAP: oxaloacetate decarboxylase gamma chain; KEGG: shw:Sputw3181_3136 sodium pump decarboxylases, gamma subunit; PFAM: Sodium ion-translocating decarboxylase
YP_006021785.1	KEGG: shw:Sputw3181_3139 CDP-diacylglycerol--serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase
YP_006021786.1	KEGG: shw:Sputw3181_3140 hypothetical protein
YP_006021787.1	TIGRFAM: Chaperonin ClpB; PFAM: ATPase associated with various cellular activities, AAA-2; Clp, N-terminal; ATPase, AAA-type, core; Clp ATPase, C-terminal; KEGG: shw:Sputw3181_3141 ATPase; SMART: ATPase, AAA+ type, core
YP_006021788.1	KEGG: shw:Sputw3181_3142 hypothetical protein; TIGRFAM: Multi-copper polyphenol oxidoreductase, laccase; PFAM: Multi-copper polyphenol oxidoreductase, laccase
YP_006021789.1	TIGRFAM: Pseudouridine synthase, RluC/RluD; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: shw:Sputw3181_3143 RluA family pseudouridine synthase; SMART: RNA-binding S4
YP_006021790.1	TIGRFAM: Outer membrane assembly lipoprotein YfiO; KEGG: shw:Sputw3181_3144 putative lipoprotein
YP_006021791.1	KEGG: shn:Shewana3_3173 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_006021792.1	HAMAP: Flavohemoprotein; KEGG: shn:Shewana3_3174 globin; PFAM: Globin, subset; Oxidoreductase FAD-binding region; Oxidoreductase FAD/NAD(P)-binding
YP_006021793.1	TIGRFAM: Pseudouridine synthase, RsuA and RluB/E/F; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: shw:Sputw3181_3146 pseudouridine synthase; SMART: RNA-binding S4
YP_006021794.1	PFAM: Tetratricopeptide TPR-1; KEGG: slo:Shew_0934 TPR repeat-containing protein
YP_006021795.1	KEGG: shw:Sputw3181_3147 putative transcriptional regulator
YP_006021796.1	PFAM: NADPH-dependent FMN reductase; KEGG: shw:Sputw3181_3148 NADPH-dependent FMN reductase
YP_006021797.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: shw:Sputw3181_3149 glyoxalase/bleomycin resistance protein/dioxygenase
YP_006021798.1	PFAM: Protein of unknown function DUF1971; KEGG: shl:Shal_0936 hypothetical protein
YP_006021799.1	KEGG: shw:Sputw3181_3150 hypothetical protein
YP_006021800.1	PFAM: GPR1/FUN34/yaaH; KEGG: shw:Sputw3181_3151 GPR1/FUN34/YaaH family protein
YP_006021801.1	KEGG: shn:Shewana3_3181 hypothetical protein
YP_006021802.1	PFAM: MltA-interacting MipA; KEGG: shn:Shewana3_3182 MltA-interacting MipA family protein
YP_006021803.1	KEGG: shw:Sputw3181_3154 hypothetical protein
YP_006021804.1	KEGG: shw:Sputw3181_3155 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region
YP_006021805.1	KEGG: spc:Sputcn32_1009 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_006021806.1	PFAM: Protein of unknown function DUF1289; KEGG: spc:Sputcn32_1008 hypothetical protein
YP_006021807.1	KEGG: spc:Sputcn32_1007 hypothetical protein
YP_006021808.1	TIGRFAM: Cysteine synthase B; Cysteine synthase K/M; KEGG: shw:Sputw3181_3159 cysteine synthase B; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit
YP_006021809.1	KEGG: spc:Sputcn32_1005 sulfate ABC transporter, periplasmic sulfate-binding protein; TIGRFAM: Thiosulphate-binding protein; PFAM: Bacterial extracellular solute-binding, family 1
YP_006021810.1	manually curated; TIGRFAM: Sulphate ABC transporter, permease protein CysT; Sulphate ABC transporter permease protein 2; KEGG: shw:Sputw3181_3161 sulfate ABC transporter, inner membrane subunit CysT; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_006021811.1	KEGG: shw:Sputw3181_3162 sulfate ABC transporter, inner membrane subunit CysW; TIGRFAM: Sulphate ABC transporter, permease protein CysW; Sulphate ABC transporter permease protein 2; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_006021812.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Sulphate transport system permease protein 1; KEGG: shw:Sputw3181_3163 sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter-like
YP_006021813.1	KEGG: bur:Bcep18194_B1831 hypothetical protein
YP_006021814.1	KEGG: she:Shewmr4_3019 ATPase central domain-containing protein; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core
YP_006021815.1	PFAM: Secretion protein HlyD; KEGG: shm:Shewmr7_3096 secretion protein HlyD family protein
YP_006021816.1	KEGG: shn:Shewana3_3194 hypothetical protein
YP_006021817.1	PFAM: ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type; TIGRFAM: Phosphoribosylglycinamide formyltransferase 2; HAMAP: Phosphoribosylglycinamide formyltransferase 2; KEGG: spc:Sputcn32_1001 phosphoribosylglycinamide formyltransferase 2
YP_006021818.1	PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: spc:Sputcn32_1000 pseudouridine synthase
YP_006021819.1	KEGG: shw:Sputw3181_3166 hypothetical protein
YP_006021820.1	SMART: Tetratricopeptide repeat; KEGG: spc:Sputcn32_0998 TPR repeat-containing protein
YP_006021821.1	KEGG: spc:Sputcn32_0997 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region
YP_006021822.1	KEGG: shw:Sputw3181_3171 hypothetical protein
YP_006021823.1	HAMAP: DnaJ-like protein djlA; PFAM: Heat shock protein DnaJ, N-terminal; KEGG: shw:Sputw3181_3172 Dna-J like membrane chaperone protein; SMART: Heat shock protein DnaJ, N-terminal
YP_006021824.1	PFAM: Nucleotidyl transferase; KEGG: shw:Sputw3181_3173 nucleotidyl transferase
YP_006021825.1	PFAM: Aminoglycoside phosphotransferase; KEGG: shw:Sputw3181_3174 aminoglycoside phosphotransferase
YP_006021826.1	KEGG: shn:Shewana3_3206 organic solvent tolerance protein; HAMAP: LPS-assembly protein lptD; PFAM: Organic solvent tolerance protein; OstA-like protein
YP_006021827.1	KEGG: shn:Shewana3_3207 PpiC-type peptidyl-prolyl cis-trans isomerase; HAMAP: Chaperone surA; PFAM: SurA N-terminal; Peptidyl-prolyl cis-trans isomerase, PpiC-type
YP_006021828.1	PFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; TIGRFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; HAMAP: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; KEGG: shm:Shewmr7_3114 4-hydroxythreonine-4-phosphate dehydrogenase
YP_006021829.1	SMART: Ribosomal RNA adenine methylase transferase, N-terminal; TIGRFAM: Ribosomal RNA adenine dimethylase; KEGG: shw:Sputw3181_3178 dimethyladenosine transferase; HAMAP: Ribosomal RNA adenine dimethylase; PFAM: Ribosomal RNA adenine methylase transferase
YP_006021830.1	KEGG: shw:Sputw3181_3179 ApaG; HAMAP: Protein ApaG; PFAM: ApaG
YP_006021831.1	PFAM: Metallophosphoesterase; TIGRFAM: Bis(5'-nucleosyl)-tetraphosphatase (symmetrical); KEGG: spc:Sputcn32_0987 diadenosine tetraphosphatase; HAMAP: Bis(5'-nucleosyl)-tetraphosphatase, symmetrical
YP_006021832.1	KEGG: shn:Shewana3_3212 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_006021833.1	KEGG: shm:Shewmr7_3119 hypothetical protein
YP_006021834.1	KEGG: shw:Sputw3181_3183 dihydrofolate reductase; PFAM: Dihydrofolate reductase region
YP_006021835.1	KEGG: son:SO_3647 hypothetical protein
YP_006021836.1	PFAM: Protein of unknown function DUF1212; KEGG: shw:Sputw3181_3185 hypothetical protein
YP_006021837.1	TIGRFAM: GTP-binding protein Obg/CgtA; HAMAP: GTPase obg; KEGG: shw:Sputw3181_3186 GTPase ObgE; PFAM: GTP1/OBG subdomain; GTP-binding protein, HSR1-related
YP_006021838.1	TIGRFAM: Ribosomal protein L27; HAMAP: Ribosomal protein L27; KEGG: shw:Sputw3181_3187 50S ribosomal protein L27; PFAM: Ribosomal protein L27
YP_006021839.1	TIGRFAM: Ribosomal protein L21; HAMAP: Ribosomal protein L21; KEGG: shw:Sputw3181_3188 50S ribosomal protein L21; PFAM: Ribosomal protein L21
YP_006021840.1	KEGG: shw:Sputw3181_3189 trans-hexaprenyltranstransferase; PFAM: Polyprenyl synthetase
YP_006021841.1	TIGRFAM: Uracil-DNA glycosylase; HAMAP: Uracil-DNA glycosylase; KEGG: shn:Shewana3_3221 uracil-DNA glycosylase; PFAM: Uracil-DNA glycosylase-like
YP_006021842.1	KEGG: son:SO_3655 pilin, putative
YP_006021843.1	KEGG: son:SO_3656 hypothetical protein
YP_006021844.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: shn:Shewana3_3224 lysine exporter protein LysE/YggA
YP_006021845.1	PFAM: Peptidase S10, serine carboxypeptidase; KEGG: shn:Shewana3_3225 peptidase S10, serine carboxypeptidase
YP_006021846.1	KEGG: shw:Sputw3181_3194 thiol:disulfide interchange protein, putative
YP_006021847.1	PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: slo:Shew_3081 TonB-dependent receptor
YP_006021848.1	TIGRFAM: PAS; PFAM: RNA polymerase sigma factor 54, interaction; PAS fold; Helix-turn-helix, Fis-type; KEGG: shw:Sputw3181_3195 fis family transcriptional regulator; SMART: ATPase, AAA+ type, core; PAS; PAC motif
YP_006021849.1	KEGG: spc:Sputcn32_0971 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; TIGRFAM: Cytochrome c oxidase cbb3 type, accessory protein FixG; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup
YP_006021850.1	KEGG: shw:Sputw3181_3197 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase
YP_006021851.1	SMART: ATPase, AAA+ type, core; TIGRFAM: ABC transporter, ATP-binding/permease protein; KEGG: shw:Sputw3181_3198 lipid ABC transporter ATPase/inner membrane protein; PFAM: ABC transporter-like; ABC transporter, transmembrane region
YP_006021852.1	PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; KEGG: shw:Sputw3181_3199 pyridoxamine 5'-phosphate oxidase-related, FMN-binding
YP_006021853.1	PFAM: Protein of unknown function DUF1008; KEGG: spc:Sputcn32_0967 hypothetical protein
YP_006021854.1	KEGG: shw:Sputw3181_3201 TonB-dependent heme/hemoglobin receptor family protein; TIGRFAM: TonB-dependent haem/haemoglobin receptor; TonB-dependent haemoglobin/transferrin/lactoferrin receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug
YP_006021855.1	TIGRFAM: TonB, C-terminal; KEGG: shw:Sputw3181_3202 TonB family protein
YP_006021856.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: shw:Sputw3181_3203 MotA/TolQ/ExbB proton channel
YP_006021857.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: spc:Sputcn32_0963 biopolymer transport protein ExbD/TolR
YP_006021858.1	PFAM: Periplasmic binding protein; KEGG: shw:Sputw3181_3214 periplasmic binding protein
YP_006021859.1	PFAM: Bacterial transport system permease protein; KEGG: shw:Sputw3181_3215 transport system permease protein
YP_006021860.1	PFAM: ABC transporter-like; KEGG: spc:Sputcn32_0960 hemin importer ATP-binding subunit; SMART: ATPase, AAA+ type, core
YP_006021861.1	KEGG: shw:Sputw3181_3217 hypothetical protein
YP_006021862.1	KEGG: shn:Shewana3_3243 hypothetical protein
YP_006021863.1	manually curated; KEGG: shw:Sputw3181_3220 hypothetical protein
YP_006021864.1	KEGG: spc:Sputcn32_0955 peptidase M17, leucyl aminopeptidase domain-containing protein; PFAM: Peptidase M17, leucyl aminopeptidase, C-terminal
YP_006021865.1	TIGRFAM: Peptidase M20C, Xaa-His dipeptidase; KEGG: spc:Sputcn32_0954 aminoacyl-histidine dipeptidase; PFAM: Peptidase M20, dimerisation; Peptidase M20
YP_006021866.1	KEGG: alv:Alvin_0351 hypothetical protein
YP_006021867.1	KEGG: ilo:IL2343 methyl-accepting chemotaxis protein; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_006021868.1	PFAM: Protein of unknown function DUF6, transmembrane; KEGG: shw:Sputw3181_3223 hypothetical protein
YP_006021869.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: shw:Sputw3181_3224 LysR family transcriptional regulator
YP_006021870.1	HAMAP: DNA polymerase IV; KEGG: spc:Sputcn32_0951 DNA polymerase IV; PFAM: DNA-repair protein, UmuC-like
YP_006021871.1	KEGG: spc:Sputcn32_0950 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_006021872.1	KEGG: spc:Sputcn32_0949 bacterioferritin; TIGRFAM: Bacterioferritin; PFAM: Ferritin/Dps protein
YP_006021873.1	KEGG: shn:Shewana3_0946 bacterioferritin; TIGRFAM: Bacterioferritin; PFAM: Ferritin/Dps protein
YP_006021874.1	PFAM: Protein of unknown function DUF539; KEGG: shw:Sputw3181_3229 hypothetical protein
YP_006021875.1	PFAM: ApbE-like lipoprotein; KEGG: shw:Sputw3181_3230 ApbE family lipoprotein
YP_006021876.1	PFAM: Oxidoreductase FAD/NAD(P)-binding; Ferredoxin; Oxidoreductase FAD-binding region; TIGRFAM: NADH-quinone reductase, Na(+)-translocating, F subunit; HAMAP: Na(+)-translocating NADH-quinone reductase subunit F; KEGG: son:SO_1108 Na(+)-translocating NADH-quinone reductase subunit F
YP_006021877.1	TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit; HAMAP: Na(+)-translocating NADH-quinone reductase subunit E; KEGG: shn:Shewana3_0942 Na(+)-translocating NADH-quinone reductase subunit E; PFAM: Electron transport complex, Rnf/Nqr
YP_006021878.1	TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit; HAMAP: Na(+)-translocating NADH-quinone reductase subunit D; KEGG: son:SO_1106 Na(+)-translocating NADH-quinone reductase subunit D; PFAM: Electron transport complex, Rnf/Nqr
YP_006021879.1	KEGG: shn:Shewana3_0940 Na(+)-translocating NADH-quinone reductase subunit C; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit; PFAM: FMN-binding
YP_006021880.1	TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit; HAMAP: Na(+)-translocating NADH-quinone reductase subunit B; KEGG: shn:Shewana3_0939 Na(+)-translocating NADH-quinone reductase subunit B; PFAM: NADH-quinone reductase NQR2/RnfD
YP_006021881.1	TIGRFAM: Na-translocating NADH-quinone reductase subunit A; HAMAP: Na(+)-translocating NADH-quinone reductase subunit A; KEGG: shw:Sputw3181_3236 Na(+)-translocating NADH-quinone reductase subunit A; PFAM: Na-translocating NADH-quinone reductase subunit A
YP_006021882.1	PFAM: TonB-dependent receptor, beta-barrel; KEGG: spc:Sputcn32_0939 TonB-dependent receptor
YP_006021883.1	HAMAP: S-ribosylhomocysteinase (LuxS); KEGG: shn:Shewana3_0936 S-ribosylhomocysteinase; PFAM: S-ribosylhomocysteinase (LuxS)
YP_006021884.1	PFAM: Extracellular solute-binding protein, family 7, bacteria; KEGG: she:Shewmr4_0933 TRAP dicarboxylate transporter-DctP subunit
YP_006021885.1	PFAM: BolA-like protein; KEGG: shm:Shewmr7_0970 transcriptional regulator BolA
YP_006021886.1	KEGG: shw:Sputw3181_3241 2OG-Fe(II) oxygenase
YP_006021887.1	KEGG: shw:Sputw3181_3242 rRNA (guanine-N(2)-)-methyltransferase; HAMAP: rRNA (guanine-N2-)-methyltransferase, RsmD; PFAM: Methyltransferase small
YP_006021889.1	PFAM: Protein of unknown function DUF2339, transmembrane; KEGG: spc:Sputcn32_0933 hypothetical protein
YP_006021890.1	TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: spc:Sputcn32_0932 O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme
YP_006021891.1	PFAM: HTH transcriptional regulator, GntR; Aminotransferase, class I/II; KEGG: shw:Sputw3181_3245 GntR family transcriptional regulator; SMART: HTH transcriptional regulator, GntR
YP_006021892.1	PFAM: Cytochrome bd ubiquinol oxidase, subunit I; KEGG: shw:Sputw3181_3246 cytochrome bd ubiquinol oxidase, subunit I
YP_006021893.1	KEGG: shw:Sputw3181_3247 cytochrome d ubiquinol oxidase, subunit II; TIGRFAM: Cytochrome bd ubiquinol oxidase, subunit II; PFAM: Cytochrome bd ubiquinol oxidase, subunit II
YP_006021894.1	PFAM: Protein of unknown function DUF2474
YP_006021895.1	KEGG: shn:Shewana3_0926 GreA/GreB family elongation factor
YP_006021897.1	KEGG: shm:Shewmr7_0961 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_006021898.1	PFAM: Protein of unknown function DUF6, transmembrane; KEGG: spc:Sputcn32_0926 hypothetical protein
YP_006021899.1	KEGG: shn:Shewana3_0923 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_006021900.1	manually curated; KEGG: shn:Shewana3_0922 hypothetical protein
YP_006021901.1	PFAM: ApbE-like lipoprotein; KEGG: shm:Shewmr7_0957 ApbE family protein, putative
YP_006021902.1	PFAM: FMN-binding; KEGG: shn:Shewana3_0920 FMN-binding domain-containing protein
YP_006021903.1	KEGG: shn:Shewana3_0919 hypothetical protein
YP_006021904.1	PFAM: Na+/H+ antiporter NhaC-like; KEGG: spc:Sputcn32_0924 Na+/H+ antiporter NhaC
YP_006021905.1	TIGRFAM: Pseudouridine synthase, RsuA and RluB/E/F; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: shw:Sputw3181_3254 pseudouridine synthase; SMART: RNA-binding S4
YP_006021906.1	KEGG: slt:Slit_1101 hypothetical protein
YP_006021907.1	KEGG: slt:Slit_1100 hypothetical protein
YP_006021908.1	KEGG: slt:Slit_1099 hypothetical protein
YP_006021909.1	PFAM: Peptidase S46; KEGG: shw:Sputw3181_3257 hypothetical protein
YP_006021910.1	PFAM: Tryptophan/tyrosine permease; KEGG: shw:Sputw3181_3258 aromatic amino acid permease
YP_006021911.1	KEGG: son:SO_1072 N-acetylglucosamine-binding protein A; HAMAP: GlcNAc-binding protein A; PFAM: Chitin-binding, domain 3
YP_006021912.1	PFAM: Uncharacterised protein family UPF0016; KEGG: shn:Shewana3_0909 hypothetical protein
YP_006021913.1	KEGG: shn:Shewana3_0908 catalase domain-containing protein; PFAM: Catalase related subgroup; Catalase-related immune responsive
YP_006021915.1	KEGG: shw:Sputw3181_0942 hypothetical protein
YP_006021916.1	KEGG: shm:Shewmr7_0943 hypothetical protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily
YP_006021917.1	KEGG: she:Shewmr4_3032 hypothetical protein
YP_006021918.1	PFAM: Endonuclease/exonuclease/phosphatase; KEGG: she:Shewmr4_3033 endonuclease/exonuclease/phosphatase
YP_006021919.1	KEGG: she:Shewmr4_3034 peptidylprolyl isomerase, FKBP-type; PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal; Peptidyl-prolyl cis-trans isomerase, FKBP-type
YP_006021920.1	PFAM: WD40 repeat, subgroup; KEGG: spc:Sputcn32_3011 WD-40 repeat-containing protein
YP_006021921.1	KEGG: son:SO_1063 SlyX protein; HAMAP: Protein slyX; PFAM: SlyX
YP_006021922.1	PFAM: Formylmethionine deformylase; TIGRFAM: Formylmethionine deformylase; HAMAP: Formylmethionine deformylase; KEGG: shm:Shewmr7_0937 peptide deformylase
YP_006021923.1	PFAM: Tetratricopeptide TPR2; KEGG: spc:Sputcn32_3014 TPR repeat-containing protein
YP_006021924.1	TIGRFAM: Uncharacterised conserved lipoprotein, UCP02722; KEGG: shn:Shewana3_0898 hypothetical protein
YP_006021925.1	TIGRFAM: Peptidase M1, aminopeptidase N actinomycete-type; KEGG: shm:Shewmr7_0932 aminopeptidase N; PFAM: Peptidase M1, membrane alanine aminopeptidase, N-terminal
YP_006021926.1	KEGG: spc:Sputcn32_3017 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; Cache; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_006021927.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate cyclase, predicted; GAF; PAS fold-3; KEGG: shw:Sputw3181_0929 diguanylate cyclase with PAS/PAC sensor; SMART: Diguanylate cyclase, predicted; PAS; GAF
YP_006021928.1	PFAM: Protein of unknown function DUF72; KEGG: shw:Sputw3181_0928 hypothetical protein
YP_006021929.1	KEGG: son:SO_1053 hypothetical protein
YP_006021930.1	PFAM: Phosphate transporter; KEGG: shn:Shewana3_0892 phosphate transporter
YP_006021931.1	KEGG: shw:Sputw3181_0926 helix-turn-helix domain-containing protein; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_006021932.1	PFAM: Glutamine amidotransferase class-I, C-terminal; KEGG: shw:Sputw3181_0925 glutamine amidotransferase
YP_006021933.1	KEGG: shw:Sputw3181_0924 glucan biosynthesis protein D; HAMAP: Glucans biosynthesis protein D; PFAM: Glucan biosynthesis, periplasmic, MdoG C-terminal
YP_006021934.1	KEGG: sfr:Sfri_1868 hypothetical protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily
YP_006021935.1	PFAM: Haem peroxidase, plant/fungal/bacterial; TIGRFAM: Catalase-peroxidase haem; HAMAP: Catalase-peroxidase haem; KEGG: hch:HCH_03207 catalase/peroxidase HPI
YP_006021936.1	PFAM: Carbon starvation protein CstA; KEGG: shw:Sputw3181_0923 carbon starvation protein CstA
YP_006021937.1	PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; TIGRFAM: Lysyl-tRNA synthetase, class II; HAMAP: Lysyl-tRNA synthetase; KEGG: shn:Shewana3_3296 lysyl-tRNA synthetase
YP_006021939.1	TIGRFAM: Formate dehydrogenase, alpha subunit; KEGG: spc:Sputcn32_3051 formate dehydrogenase, alpha subunit; PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Molydopterin dinucleotide-binding region
YP_006021940.1	KEGG: shm:Shewmr7_3199 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; Cache, type 2; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_006021941.1	KEGG: shw:Sputw3181_0892 chromate transporter; TIGRFAM: Chromate transporter; PFAM: Chromate transporter region
YP_006021942.1	TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumB; HAMAP: 23S rRNA (uracil-5-)-methyltransferase rumB; KEGG: shw:Sputw3181_0891 23S rRNA methyluridine methyltransferase; PFAM: (Uracil-5)-methyltransferase
YP_006021943.1	KEGG: spc:Sputcn32_3055 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase
YP_006021944.1	KEGG: shw:Sputw3181_0889 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR
YP_006021945.1	KEGG: shm:Shewmr7_3209 OsmC family protein; TIGRFAM: Peroxiredoxin, organic hydroperoxide resistance-related; PFAM: Peroxiredoxin, OsmC-like protein
YP_006021946.1	KEGG: shm:Shewmr7_3210 hypothetical protein
YP_006021947.1	KEGG: shn:Shewana3_3314 hypothetical protein
YP_006021948.1	KEGG: shw:Sputw3181_3264 hypothetical protein
YP_006021949.1	PFAM: Methyltransferase type 12; KEGG: shm:Shewmr7_3213 methyltransferase type 12
YP_006021950.1	KEGG: she:Shewmr4_0809 hypothetical protein
YP_006021951.1	TIGRFAM: Flavocytochrome c; KEGG: shn:Shewana3_3318 flavocytochrome c; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal
YP_006021952.1	KEGG: shn:Shewana3_3319 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region
YP_006021953.1	PFAM: Dienelactone hydrolase; KEGG: spc:Sputcn32_0903 dienelactone hydrolase
YP_006021955.1	KEGG: sdn:Sden_3531 hypothetical protein
YP_006021956.1	PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: ilo:IL1228 outer membrane protein
YP_006021957.1	KEGG: fbl:Fbal_0171 hypothetical protein
YP_006021958.1	PFAM: PepSY-associated TM helix; KEGG: sfr:Sfri_0270 hypothetical protein
YP_006021959.1	KEGG: she:Shewmr4_0805 hypothetical protein
YP_006021960.1	PFAM: Mechanosensitive ion channel MscS; KEGG: shw:Sputw3181_3273 hypothetical protein
YP_006021961.1	PFAM: Spermine synthase; KEGG: spc:Sputcn32_0898 spermine synthase
YP_006021962.1	KEGG: shm:Shewmr7_3221 leucyl aminopeptidase; HAMAP: cytosol aminopeptidase; PFAM: Peptidase M17, leucyl aminopeptidase, C-terminal; Peptidase M17, leucyl aminopeptidase, N-terminal
YP_006021963.1	TIGRFAM: Peroxiredoxin; KEGG: shw:Sputw3181_3276 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin, C-terminal
YP_006021964.1	TIGRFAM: Alkyl hydroperoxide reductase, subunit F; KEGG: shw:Sputw3181_3277 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_006021965.1	KEGG: hypothetical protein
YP_006021966.1	KEGG: sdn:Sden_1933 hypothetical protein
YP_006021967.1	PFAM: GCN5-related N-acetyltransferase; KEGG: spc:Sputcn32_0894 GCN5-related N-acetyltransferase
YP_006021968.1	KEGG: spc:Sputcn32_0892 single-stranded-DNA-specific exonuclease RecJ; TIGRFAM: Bacterial RecJ exonuclease; PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1
YP_006021969.1	PFAM: Disulphide bond isomerase, DsbC/G, N-terminal; KEGG: shm:Shewmr7_3227 thiol:disulfide interchange protein DsbC
YP_006021970.1	TIGRFAM: Tyrosine recombinase XerD; HAMAP: Tyrosine recombinase xerD; KEGG: shw:Sputw3181_3283 tyrosine recombinase XerD; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage
YP_006021971.1	KEGG: shn:Shewana3_3332 branched-chain amino acid transport system II carrier protein; TIGRFAM: Branched-chain amino acid transport system II carrier protein; PFAM: Branched-chain amino acid transport system II carrier protein
YP_006021972.1	KEGG: spc:Sputcn32_0888 methyltransferase type 12; HAMAP: tRNA (adenine-N(6)-)-methyltransferase; PFAM: Methyltransferase type 11
YP_006021973.1	KEGG: shw:Sputw3181_3286 ATP-dependent RNA helicase SrmB; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal
YP_006021974.1	KEGG: shw:Sputw3181_3287 RND family efflux transporter MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_006021975.1	PFAM: Acriflavin resistance protein; KEGG: shw:Sputw3181_3288 acriflavin resistance protein
YP_006021976.1	PFAM: Radical SAM; KEGG: shm:Shewmr7_3236 radical SAM domain-containing protein
YP_006021977.1	PFAM: PAS fold; KEGG: shw:Sputw3181_3290 putative PAS/PAC sensor protein
YP_006021978.1	KEGG: shw:Sputw3181_3291 hypothetical protein
YP_006021979.1	KEGG: shw:Sputw3181_3292 hypothetical protein
YP_006021980.1	PFAM: Signal transduction response regulator, C-terminal; KEGG: shm:Shewmr7_3240 lysine decarboxylase transcriptional regulator, CadC
YP_006021981.1	PFAM: Divalent ion symporter; KEGG: shn:Shewana3_3348 Na+/H+ antiporter
YP_006021982.1	PFAM: Protein of unknown function DUF481; KEGG: shn:Shewana3_3349 hypothetical protein
YP_006021983.1	TIGRFAM: Fructose-bisphosphate aldolase, class II, Calvin cycle subtype; Ketose-bisphosphate aldolase, class-II; KEGG: shw:Sputw3181_3298 fructose-1,6-bisphosphate aldolase; PFAM: Ketose-bisphosphate aldolase, class-II
YP_006021984.1	KEGG: son:SO_0932 phosphoglycerate kinase; PFAM: Phosphoglycerate kinase
YP_006021985.1	PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; TIGRFAM: D-erythrose-4-phosphate dehydrogenase; HAMAP: D-erythrose-4-phosphate dehydrogenase; KEGG: shw:Sputw3181_3300 erythrose 4-phosphate dehydrogenase
YP_006021986.1	SMART: Transketolase-like, pyrimidine-binding domain; TIGRFAM: Transketolase, bacterial-like; KEGG: spc:Sputcn32_0872 transketolase; PFAM: Transketolase, N-terminal; Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal
YP_006021987.1	PFAM: S-adenosylmethionine synthetase; TIGRFAM: S-adenosylmethionine synthetase; HAMAP: S-adenosylmethionine synthase; KEGG: sdn:Sden_1082 S-adenosylmethionine synthetase
YP_006021989.1	PFAM: GCN5-related N-acetyltransferase; KEGG: sdn:Sden_1378 GCN5-related N-acetyltransferase
YP_006021990.1	KEGG: shw:Sputw3181_3308 hypothetical protein
YP_006021991.1	KEGG: shw:Sputw3181_3309 acetyltransferase
YP_006021992.1	KEGG: shm:Shewmr7_3256 GGDEF domain-containing protein
YP_006021993.1	KEGG: shm:Shewmr7_3257 hypothetical protein
YP_006021994.1	PFAM: Domain of unknown function DUF306, Meta/HslJ; KEGG: shm:Shewmr7_3258 protein of unknown function DUF306, MetA and HslJ
YP_006021995.1	PFAM: Sodium:dicarboxylate symporter; KEGG: shw:Sputw3181_3312 sodium:dicarboxylate symporter
YP_006021996.1	KEGG: son:SO_0921 hypothetical protein
YP_006021997.1	PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO_0920 acetyltransferase
YP_006021998.1	PFAM: Tryptophan/tyrosine permease; KEGG: shw:Sputw3181_3314 aromatic amino acid permease
YP_006021999.1	KEGG: shm:Shewmr7_3263 peptidase S45, penicillin amidase; PFAM: Peptidase S45, penicillin amidase
YP_006022000.1	TIGRFAM: Protein of unknown function DUF84; HAMAP: Protein of unknown function DUF84; KEGG: shw:Sputw3181_3316 NTPase; PFAM: Protein of unknown function DUF84
YP_006022001.1	KEGG: shw:Sputw3181_3317 MarR family transcriptional regulator; PFAM: GCN5-related N-acetyltransferase; HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR
YP_006022002.1	PFAM: Transposase, IS4-like; KEGG: spc:Sputcn32_2918 transposase, IS4 family protein
YP_006022004.1	TIGRFAM: NADH-quinone reductase, Na(+)-translocating, F subunit; KEGG: spc:Sputcn32_0854 Na(+)-translocating NADH-quinone reductase subunit F; PFAM: Oxidoreductase FAD/NAD(P)-binding; Oxidoreductase FAD-binding region; Ferredoxin
YP_006022005.1	TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit; HAMAP: Na(+)-translocating NADH-quinone reductase subunit E; KEGG: shn:Shewana3_3374 Na(+)-translocating NADH-quinone reductase subunit E; PFAM: Electron transport complex, Rnf/Nqr
YP_006022006.1	KEGG: shn:Shewana3_3375 Na(+)-translocating NADH-quinone reductase subunit D; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit; PFAM: Electron transport complex, Rnf/Nqr
YP_006022007.1	KEGG: shn:Shewana3_3376 Na(+)-translocating NADH-quinone reductase subunit C; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit; PFAM: FMN-binding
YP_006022008.1	KEGG: shw:Sputw3181_3323 Na(+)-translocating NADH-quinone reductase subunit B; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit; PFAM: NADH-quinone reductase NQR2/RnfD
YP_006022009.1	TIGRFAM: Na-translocating NADH-quinone reductase subunit A; HAMAP: Na(+)-translocating NADH-quinone reductase subunit A; KEGG: shn:Shewana3_3378 Na(+)-translocating NADH-quinone reductase subunit A; PFAM: Na-translocating NADH-quinone reductase subunit A
YP_006022010.1	PFAM: Aldo/keto reductase; KEGG: shw:Sputw3181_3325 aldo/keto reductase
YP_006022011.1	PFAM: MltA-interacting MipA; KEGG: shw:Sputw3181_3326 MltA-interacting MipA family protein
YP_006022012.1	KEGG: spc:Sputcn32_0846 hypothetical protein
YP_006022013.1	KEGG: shw:Sputw3181_3328 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain
YP_006022014.1	KEGG: shw:Sputw3181_3330 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region
YP_006022015.1	KEGG: shw:Sputw3181_3331 hypothetical protein
YP_006022016.1	PFAM: MltA-interacting MipA; KEGG: shw:Sputw3181_3332 MltA-interacting MipA family protein
YP_006022017.1	KEGG: svo:SVI_2208 hypothetical protein
YP_006022018.1	KEGG: shn:Shewana3_3383 TonB-dependent receptor, plug; TIGRFAM: Outer membrane insertion C-terminal signal, omp85; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel
YP_006022020.1	PFAM: Integrase, catalytic core; KEGG: sdn:Sden_2262 integrase catalytic subunit
YP_006022022.1	PFAM: Stringent starvation protein B; KEGG: csa:Csal_2204 stringent starvation protein B
YP_006022023.1	KEGG: shn:Shewana3_0809 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_006022024.1	TIGRFAM: Cysteine desulfurase, SufS; KEGG: shw:Sputw3181_3333 SufS subfamily cysteine desulfurase; PFAM: Aminotransferase, class V/Cysteine desulfurase
YP_006022025.1	PFAM: Fe-S metabolism associated SufE; KEGG: shw:Sputw3181_3334 Fe-S metabolism associated SufE
YP_006022026.1	PFAM: Peptidase M19, renal dipeptidase; KEGG: shw:Sputw3181_3335 peptidase M19, renal dipeptidase
YP_006022027.1	PFAM: RecF/RecN/SMC protein, N-terminal; KEGG: she:Shewmr4_3134 hypothetical protein
YP_006022028.1	KEGG: shw:Sputw3181_3336 cupin 2 domain-containing protein; manually curated; PFAM: Cupin 2, conserved barrel
YP_006022029.1	PFAM: MORN variant; KEGG: shw:Sputw3181_3337 hypothetical protein
YP_006022030.1	PFAM: Abortive infection protein; KEGG: shn:Shewana3_0802 abortive infection protein
YP_006022031.1	PFAM: Protein of unknown function DUF1696; KEGG: shm:Shewmr7_0829 hypothetical protein
YP_006022032.1	PFAM: Peptidase U32; KEGG: shw:Sputw3181_3338 peptidase U32
YP_006022034.1	PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: spc:Sputcn32_0834 pseudouridylate synthase
YP_006022035.1	KEGG: shw:Sputw3181_3340 DNA-binding transcriptional regulator AsnC; PFAM: Transcription regulator, AsnC-type, C-terminal; SMART: Transcription regulator, AsnC-type
YP_006022036.1	KEGG: spc:Sputcn32_0832 peptidase S8/S53 subtilisin kexin sedolisin; PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; Proteinase inhibitor I9, subtilisin propeptide; Protease-associated PA; Bacterial Ig-like, group 2; PKD; SMART: PKD
YP_006022037.1	KEGG: sfr:Sfri_4014 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911
YP_006022038.1	PFAM: ABC-2 type transporter; KEGG: spc:Sputcn32_0831 ABC-2 type transporter
YP_006022039.1	PFAM: ABC transporter-like; KEGG: son:SO_3802 ABC transporter, ATP-binding protein; SMART: ATPase, AAA+ type, core
YP_006022040.1	TIGRFAM: Hypoxanthine phosphoribosyl transferase; KEGG: shw:Sputw3181_3344 hypoxanthine phosphoribosyltransferase; PFAM: Phosphoribosyltransferase
YP_006022041.1	KEGG: spc:Sputcn32_0828 aromatic acid decarboxylase; TIGRFAM: Phenylacrylic acid decarboxylase; PFAM: Flavoprotein
YP_006022042.1	TIGRFAM: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase; KEGG: shw:Sputw3181_3346 UDP-N-acetylmuramate; PFAM: Mur ligase, N-terminal; Mur ligase, central; Mur ligase, C-terminal
YP_006022043.1	KEGG: shw:Sputw3181_3347 hypothetical protein
YP_006022044.1	PFAM: Fatty acid hydroxylase; KEGG: shw:Sputw3181_3348 sterol desaturase family protein
YP_006022045.1	KEGG: shw:Sputw3181_3349 hypothetical protein
YP_006022046.1	KEGG: son:SO_3810 OmpA-like transmembrane domain-containing protein
YP_006022047.1	PFAM: Uncharacterised protein family, YajG; KEGG: shm:Shewmr7_0815 hypothetical protein
YP_006022048.1	PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; KEGG: shw:Sputw3181_3352 peptidyl-prolyl cis-trans isomerase, cyclophilin type
YP_006022049.1	KEGG: shw:Sputw3181_3353 hypothetical protein
YP_006022050.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spc:Sputcn32_0819 major facilitator transporter
YP_006022051.1	KEGG: swp:swp_1151 putative nucleotide-binding protein; HAMAP: UPF0234 protein yajQ; PFAM: Protein of unknown function DUF520
YP_006022053.1	PFAM: VanZ like protein; KEGG: shw:Sputw3181_3356 VanZ family protein
YP_006022054.1	TIGRFAM: Ketopantoate reductase ApbA/PanE; KEGG: shw:Sputw3181_3357 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE, C-terminal; Ketopantoate reductase ApbA/PanE, N-terminal
YP_006022055.1	PFAM: Nitrogen regulatory protein PII; KEGG: son:SO_3819 nitrogen regulatory protein P-II
YP_006022056.1	KEGG: shm:Shewmr7_0807 ammonium transporter; TIGRFAM: Ammonium transporter; PFAM: Ammonium transporter
YP_006022057.1	KEGG: spc:Sputcn32_0814 EAL domain-containing protein; PFAM: Diguanylate phosphodiesterase, predicted; SMART: Diguanylate phosphodiesterase, predicted
YP_006022058.1	KEGG: son:SO_3822 hypothetical protein
YP_006022059.1	PFAM: DAHP synthetase I/KDSA; TIGRFAM: 3-deoxy-8-phosphooctulonate synthase; HAMAP: 3-deoxy-8-phosphooctulonate synthase; KEGG: shw:Sputw3181_3365 2-dehydro-3-deoxyphosphooctonate aldolase
YP_006022060.1	PFAM: Protein of unknown function DUF819; KEGG: shw:Sputw3181_3366 hypothetical protein
YP_006022061.1	KEGG: shm:Shewmr7_0801 hypothetical protein
YP_006022062.1	PFAM: Invasion gene expression up-regulator, SirB; KEGG: shw:Sputw3181_3368 invasion gene expression up-regulator, SirB
YP_006022063.1	PFAM: GCN5-related N-acetyltransferase; KEGG: spc:Sputcn32_0805 GCN5-related N-acetyltransferase
YP_006022064.1	KEGG: slo:Shew_3816 OmpA domain-containing protein
YP_006022065.1	KEGG: shw:Sputw3181_3373 HemK family modification methylase; TIGRFAM: Protein-(glutamine-N5) methyltransferase, release factor-specific; Modification methylase HemK; PFAM: Methyltransferase small
YP_006022066.1	TIGRFAM: Peptide chain release factor 1; HAMAP: Peptide chain release factor 1; KEGG: shw:Sputw3181_3374 peptide chain release factor 1; PFAM: Peptide chain release factor; Class I peptide chain release factor
YP_006022067.1	TIGRFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase; HAMAP: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase; KEGG: shw:Sputw3181_3375 glutamyl-tRNA reductase; PFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, C-terminal
YP_006022068.1	TIGRFAM: Outer membrane lipoprotein LolB; HAMAP: Outer-membrane lipoprotein lolB; KEGG: son:SO_3835 outer membrane lipoprotein LolB; PFAM: Outer membrane lipoprotein LolB
YP_006022069.1	TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; KEGG: shw:Sputw3181_3377 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase, C-terminal
YP_006022070.1	TIGRFAM: Phosphoribosyl pyrophosphokinase; KEGG: shw:Sputw3181_3378 ribose-phosphate pyrophosphokinase; PFAM: Phosphoribosyltransferase
YP_006022071.1	KEGG: shn:Shewana3_0764 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_006022072.1	KEGG: shw:Sputw3181_3380 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2
YP_006022073.1	KEGG: shn:Shewana3_0762 hypothetical protein
YP_006022074.1	KEGG: shm:Shewmr7_0789 hypothetical protein
YP_006022075.1	TIGRFAM: Pseudouridine synthase, RsuA and RluB/E/F; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: she:Shewmr4_3178 ribosomal small subunit pseudouridine synthase A; SMART: RNA-binding S4
YP_006022076.1	KEGG: sse:Ssed_3508 nodulation protein L
YP_006022077.1	KEGG: she:Shewmr4_3179 endothelin-converting protein 1; PFAM: Peptidase M13; Peptidase M13, neprilysin, C-terminal
YP_006022078.1	KEGG: shw:Sputw3181_3385 hypothetical protein
YP_006022079.1	PFAM: Cell wall assembly/cell proliferation coordinating protein, KNR4-like; KEGG: shw:Sputw3181_3386 hypothetical protein
YP_006022080.1	KEGG: shm:Shewmr7_0784 hypothetical protein
YP_006022081.1	PFAM: Glutathione S-transferase, N-terminal; Glutathione S-transferase, C-terminal; KEGG: shm:Shewmr7_0783 glutathione S-transferase domain-containing protein
YP_006022082.1	PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: shn:Shewana3_0754 TonB-dependent receptor
YP_006022083.1	PFAM: Protein of unknown function DUF304, prokaryotic transmembrane adjacent region; KEGG: spc:Sputcn32_0787 membrane-flanked domain-containing protein
YP_006022084.1	KEGG: spc:Sputcn32_0786 putative manganese transporter
YP_006022085.1	PFAM: Protein of unknown function DUF1456; KEGG: shw:Sputw3181_3390 hypothetical protein
YP_006022086.1	HAMAP: NAD-dependent malic enzyme; KEGG: shw:Sputw3181_3391 malate dehydrogenase; PFAM: Malic enzyme, NAD-binding; Malic enzyme, N-terminal
YP_006022087.1	KEGG: son:SO_3856 hypothetical protein
YP_006022088.1	KEGG: she:Shewmr4_3190 phosphoesterase, PA-phosphatase related; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase
YP_006022089.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: shn:Shewana3_0747 diguanylate cyclase; SMART: Diguanylate cyclase, predicted; Tetratricopeptide repeat
YP_006022090.1	KEGG: she:Shewmr4_3192 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3
YP_006022091.1	KEGG: shn:Shewana3_0745 putative iron-sulfur cluster binding protein; TIGRFAM: 4Fe-4S cluster binding; PFAM: Domain of unknown function DUF1730
YP_006022092.1	KEGG: eca:ECA1971 hypothetical protein
YP_006022093.1	PFAM: Methionine synthase, vitamin-B12 independent; Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal; TIGRFAM: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; HAMAP: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; KEGG: shw:Sputw3181_0771 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase
YP_006022094.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: shw:Sputw3181_0770 LysR family transcriptional regulator
YP_006022095.1	PFAM: Metal-dependent hydrolase HDOD; KEGG: shw:Sputw3181_0769 putative signal transduction protein
YP_006022096.1	PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; KEGG: she:Shewmr4_3302 TonB-dependent siderophore receptor
YP_006022097.1	KEGG: shw:Sputw3181_0766 hypothetical protein
YP_006022098.1	HAMAP: Pyrimidine-specific ribonucleoside hydrolase rihA; KEGG: shw:Sputw3181_0765 ribonucleoside hydrolase 1; PFAM: Inosine/uridine-preferring nucleoside hydrolase
YP_006022099.1	TIGRFAM: Ribokinase, bacterial; KEGG: spc:Sputcn32_3179 ribokinase; PFAM: Carbohydrate/purine kinase
YP_006022100.1	KEGG: shn:Shewana3_3478 blue (type1) copper domain-containing protein; TIGRFAM: Azurin, proteobacteria; PFAM: Blue (type 1) copper domain
YP_006022101.1	KEGG: shw:Sputw3181_0762 hypothetical protein
YP_006022103.1	KEGG: shw:Sputw3181_0761 hypothetical protein
YP_006022104.1	PFAM: Glycerophosphoryl diester phosphodiesterase; KEGG: she:Shewmr4_3310 glycerophosphoryl diester phosphodiesterase
YP_006022105.1	KEGG: shw:Sputw3181_0760 hypoxanthine-guanine phosphoribosyltransferase
YP_006022106.1	KEGG: shn:Shewana3_3482 alkaline phosphatase; PFAM: Alkaline phosphatase D-related
YP_006022107.1	KEGG: shn:Shewana3_3483 CBS domain-containing protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core
YP_006022108.1	KEGG: shn:Shewana3_3484 hypothetical protein
YP_006022109.1	KEGG: shw:Sputw3181_0756 MATE efflux family protein; TIGRFAM: Multi antimicrobial extrusion protein MatE; PFAM: Multi antimicrobial extrusion protein MatE
YP_006022110.1	KEGG: spc:Sputcn32_3188 alpha/beta hydrolase domain-containing protein
YP_006022111.1	TIGRFAM: Prolipoprotein diacylglyceryl transferase; HAMAP: Prolipoprotein diacylglyceryl transferase; KEGG: shw:Sputw3181_0754 prolipoprotein diacylglyceryl transferase; PFAM: Prolipoprotein diacylglyceryl transferase
YP_006022112.1	PFAM: Protein of unknown function DUF985; KEGG: spc:Sputcn32_3190 hypothetical protein
YP_006022113.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: shn:Shewana3_3488 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_006022114.1	KEGG: shw:Sputw3181_0744 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP03549; YcaO-like; PFAM: YcaO-like; Peroxiredoxin, OsmC-like protein
YP_006022115.1	KEGG: shl:Shal_3327 hypothetical protein
YP_006022116.1	KEGG: she:Shewmr4_3323 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; Cache, type 2; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_006022117.1	KEGG: shw:Sputw3181_0742 hypothetical protein
YP_006022118.1	manually curated; KEGG: spc:Sputcn32_3202 hypothetical protein
YP_006022119.1	KEGG: spc:Sputcn32_3203 hypothetical protein
YP_006022120.1	KEGG: slo:Shew_3054 hypothetical protein
YP_006022121.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: pha:PSHAa2463 hypothetical protein; SMART: Diguanylate cyclase, predicted
YP_006022122.1	KEGG: rso:RSc0206 putative signal peptide protein
YP_006022123.1	KEGG: ank:AnaeK_3353 hypothetical protein
YP_006022124.1	KEGG: rsl:RPSI07_mp0936 zinc-type alcohol dehydrogenase-like protein yahk; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like
YP_006022125.1	PFAM: Major facilitator superfamily MFS-1; KEGG: ent:Ent638_0048 major facilitator transporter
YP_006022126.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: bpy:Bphyt_0040 transcriptional regulator, LysR family
YP_006022127.1	PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Anticodon-binding; KEGG: vha:VIBHAR_06960 threonyl-tRNA synthetase
YP_006022128.1	TIGRFAM: Glycine cleavage system P-protein; HAMAP: Glycine cleavage system P-protein; KEGG: shw:Sputw3181_0732 glycine dehydrogenase; PFAM: Glycine cleavage system P-protein, N-terminal
YP_006022129.1	TIGRFAM: Glycine cleavage H-protein, subgroup; HAMAP: Glycine cleavage H-protein; KEGG: shn:Shewana3_3500 glycine cleavage system protein H; PFAM: Glycine cleavage H-protein
YP_006022130.1	PFAM: Glycine cleavage T-protein, N-terminal; Glycine cleavage T-protein, C-terminal barrel; TIGRFAM: Glycine cleavage system T protein; HAMAP: Aminomethyltransferase; KEGG: shw:Sputw3181_0730 glycine cleavage system aminomethyltransferase T
YP_006022131.1	KEGG: son:SO_0778 FAD-binding, UbiH/COQ6 family oxidoreductase; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6; PFAM: FAD dependent oxidoreductase
YP_006022132.1	KEGG: shw:Sputw3181_0728 2-polyprenyl-6-methoxyphenol 4-hydroxylase; TIGRFAM: 2-polyprenyl-6-methoxyphenol 4-hydroxylase; Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6; PFAM: FAD dependent oxidoreductase
YP_006022133.1	TIGRFAM: YgfB/YecA protein; KEGG: shw:Sputw3181_0727 YecA family protein
YP_006022134.1	PFAM: Cell division protein ZapA-like; KEGG: shn:Shewana3_3505 cell division protein ZapA
YP_006022135.1	KEGG: spc:Sputcn32_3216 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase
YP_006022136.1	KEGG: spc:Sputcn32_3217 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_006022137.1	PFAM: Putative thiol-disulphide oxidoreductase DCC; KEGG: shw:Sputw3181_0723 putative thiol-disulphide oxidoreductase DCC
YP_006022138.1	KEGG: shw:Sputw3181_0722 malate dehydrogenase; TIGRFAM: Malate dehydrogenase, NAD-dependent, eukaryote/gamma proteobacteria; PFAM: Lactate/malate dehydrogenase
YP_006022139.1	TIGRFAM: Arginine repressor; HAMAP: Arginine repressor; KEGG: shw:Sputw3181_0721 arginine repressor; PFAM: Arginine repressor
YP_006022140.1	KEGG: shw:Sputw3181_0720 NAD-dependent epimerase/dehydratase
YP_006022141.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: shw:Sputw3181_0719 LysR family transcriptional regulator
YP_006022142.1	KEGG: shw:Sputw3181_0718 Dyp-type peroxidase family protein; TIGRFAM: Dyp-type peroxidase; PFAM: Dyp-type peroxidase
YP_006022143.1	TIGRFAM: Gamma-glutamyltranspeptidase; KEGG: shn:Shewana3_3514 gamma-glutamyltransferase 2; PFAM: Gamma-glutamyltranspeptidase
YP_006022144.1	PFAM: ABC transporter-like; Transport-associated OB, type 2; KEGG: shw:Sputw3181_0716 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_006022145.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: shm:Shewmr7_0607 binding-protein-dependent transport systems inner membrane component
YP_006022146.1	PFAM: Bacterial extracellular solute-binding, family 1; KEGG: shn:Shewana3_3517 extracellular solute-binding protein
YP_006022147.1	KEGG: shm:Shewmr7_0605 hypothetical protein
YP_006022148.1	PFAM: Glutathione S-transferase, N-terminal; KEGG: shn:Shewana3_3519 glutathione S-transferase domain-containing protein
YP_006022149.1	KEGG: she:Shewmr4_3350 oxidoreductase FAD/NAD(P)-binding subunit; PFAM: Oxidoreductase FAD/NAD(P)-binding; Oxidoreductase FAD-binding region
YP_006022150.1	KEGG: son:SO_0748 hypothetical protein
YP_006022151.1	PFAM: Phosphoglycerate mutase; KEGG: spc:Sputcn32_3232 phosphoglycerate mutase
YP_006022152.1	KEGG: shm:Shewmr7_0600 ferredoxin-dependent glutamate synthase; PFAM: Glutamate synthase, central-C
YP_006022153.1	KEGG: shw:Sputw3181_0707 hypothetical protein
YP_006022154.1	KEGG: shw:Sputw3181_0706 hypothetical protein
YP_006022155.1	PFAM: ABC transporter-like; ABC transporter, transmembrane region; KEGG: spc:Sputcn32_3236 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_006022156.1	KEGG: shw:Sputw3181_0704 hypothetical protein
YP_006022157.1	TIGRFAM: DHAP synthase, class 1; KEGG: spc:Sputcn32_3238 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA
YP_006022158.1	PFAM: Tetratricopeptide TPR-1; KEGG: shm:Shewmr7_0594 TPR repeat-containing protein
YP_006022159.1	KEGG: shm:Shewmr7_0593 hypothetical protein
YP_006022160.1	KEGG: shw:Sputw3181_0701 Rh family protein/ammonium transporter; TIGRFAM: Probable ammonium transporter, marine subtype; Ammonium transporter; PFAM: Ammonium transporter
YP_006022161.1	PFAM: Nitrogen regulatory protein PII; KEGG: son:SO_0761 nitrogen regulatory protein P-II 1
YP_006022162.1	PFAM: Isochorismatase-like; KEGG: shw:Sputw3181_0699 isochorismatase hydrolase
YP_006022163.1	KEGG: slo:Shew_2714 hypothetical protein
YP_006022164.1	TIGRFAM: Formate-dependent cytochrome c nitrite reductase, c552 subunit; KEGG: shm:Shewmr7_3363 cytochrome c552; PFAM: Cytochrome c552
YP_006022165.1	PFAM: Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; HAMP linker domain; ATP-binding region, ATPase-like; KEGG: shn:Shewana3_0657 nitrate/nitrite sensor protein NarQ
YP_006022166.1	KEGG: shn:Shewana3_0656 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal
YP_006022167.1	PFAM: Uncharacterised conserved protein UCP006287; KEGG: son:SO_3983 hypothetical protein
YP_006022168.1	PFAM: Mg2+ transporter protein, CorA-like; KEGG: shw:Sputw3181_3490 Mg2+ transporter protein, CorA family protein
YP_006022169.1	PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: son:SO_3985 hypothetical protein
YP_006022170.1	TIGRFAM: Aspartate kinase region; Aspartate kinase, monofunctional class; KEGG: shw:Sputw3181_3491 aspartate kinase III; PFAM: Aspartate/glutamate/uridylate kinase
YP_006022171.1	KEGG: spc:Sputcn32_0679 hypothetical protein
YP_006022172.1	KEGG: shw:Sputw3181_3493 two-component response regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region
YP_006022173.1	KEGG: sfr:Sfri_4014 transposase IS3/IS911 family protein; manually curated; PFAM: Transposase IS3/IS911
YP_006022174.1	KEGG: spc:Sputcn32_0677 peptidase S9B dipeptidylpeptidase IV subunit; PFAM: Peptidase S9B, dipeptidylpeptidase IV N-terminal; Peptidase S9, prolyl oligopeptidase, catalytic domain
YP_006022175.1	HAMAP: Fructose-1,6-bisphosphatase; KEGG: shw:Sputw3181_3495 fructose-1,6-bisphosphatase; PFAM: Fructose-1,6-bisphosphatase
YP_006022178.1	KEGG: son:SO_3996 hypothetical protein
YP_006022179.1	TIGRFAM: Uncharacterised protein family UPF0114, bacteria; HAMAP: Uncharacterised protein family UPF0114, gammaproteobacteria; KEGG: son:SO_3997 hypothetical protein; PFAM: Uncharacterised protein family UPF0114, prokaryotic
YP_006022180.1	PFAM: Sodium:dicarboxylate symporter; KEGG: spc:Sputcn32_0671 sodium:dicarboxylate symporter
YP_006022181.1	KEGG: shw:Sputw3181_3504 hypothetical protein
YP_006022182.1	KEGG: shw:Sputw3181_3505 hypothetical protein
YP_006022183.1	KEGG: spc:Sputcn32_0668 hypothetical protein
YP_006022184.1	KEGG: spc:Sputcn32_0667 hypothetical protein
YP_006022185.1	KEGG: shw:Sputw3181_3508 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal
YP_006022186.1	KEGG: spc:Sputcn32_0665 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_006022187.1	PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: shw:Sputw3181_3510 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_006022188.1	PFAM: Polysulphide reductase, NrfD; KEGG: shw:Sputw3181_3511 polysulphide reductase, NrfD
YP_006022189.1	PFAM: Molydopterin dinucleotide-binding region; Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 region; KEGG: shw:Sputw3181_3512 molydopterin dinucleotide-binding region
YP_006022190.1	TIGRFAM: PAS; PFAM: Chemotaxis methyl-accepting receptor, signalling; PAS fold-3; KEGG: shn:Shewana3_0632 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; SMART: Chemotaxis methyl-accepting receptor, signalling; PAS; PAC motif
YP_006022191.1	KEGG: shw:Sputw3181_3514 hypothetical protein
YP_006022192.1	KEGG: spc:Sputcn32_0659 hypothetical protein
YP_006022193.1	KEGG: shw:Sputw3181_3516 hypothetical protein
YP_006022194.1	PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; KEGG: shw:Sputw3181_3517 PpiC-type peptidyl-prolyl cis-trans isomerase
YP_006022195.1	TIGRFAM: Penicillin-binding protein 1B; KEGG: shw:Sputw3181_3518 penicillin-binding protein 1B; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase
YP_006022196.1	TIGRFAM: RNA helicase, ATP-dependent DEAH box, HrpB type; PFAM: RNA helicase, ATP-dependent, HrpB type, C-terminal; DNA/RNA helicase, C-terminal; Helicase-associated region; KEGG: shw:Sputw3181_3519 ATP-dependent helicase HrpB; SMART: DNA/RNA helicase, C-terminal; DEAD-like helicase, N-terminal
YP_006022197.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; KEGG: spc:Sputcn32_0654 diguanylate cyclase/phosphodiesterase; SMART: Diguanylate cyclase, predicted; Diguanylate phosphodiesterase, predicted
YP_006022198.1	KEGG: shm:Shewmr7_3410 2'-5' RNA ligase; TIGRFAM: 2',5' RNA ligase; PFAM: Phosphoesterase, HXTX
YP_006022199.1	KEGG: son:SO_0625 hypothetical protein; PFAM: Sel1-like; SMART: Sel1-like
YP_006022200.1	KEGG: shw:Sputw3181_3522 cAMP-regulatory protein; PFAM: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp; SMART: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp
YP_006022201.1	KEGG: shn:Shewana3_0616 hypothetical protein
YP_006022202.1	KEGG: shw:Sputw3181_3524 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region
YP_006022203.1	KEGG: shw:Sputw3181_3525 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; SMART: ATP-binding region, ATPase-like
YP_006022204.1	KEGG: spc:Sputcn32_0648 hypothetical protein
YP_006022205.1	PFAM: Aldehyde dehydrogenase; TIGRFAM: Succinylglutamic semialdehyde dehydrogenase; HAMAP: Succinylglutamic semialdehyde dehydrogenase; KEGG: shw:Sputw3181_3527 succinylglutamic semialdehyde dehydrogenase
YP_006022206.1	TIGRFAM: Arginine N-succinyltransferase AstA; Arginine N-succinyltransferase Ast/AOST; KEGG: shw:Sputw3181_3528 arginine N-succinyltransferase; PFAM: Arginine N-succinyltransferase Ast/AOST
YP_006022207.1	PFAM: Aminotransferase class-III; TIGRFAM: Succinylornithine transaminase family; Acetylornithine/succinylornithine aminotransferase; HAMAP: Acetylornithine/succinyldiaminopimelate aminotransferase; KEGG: son:SO_0617 bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein
YP_006022208.1	KEGG: spc:Sputcn32_0644 alpha/beta hydrolase domain-containing protein
YP_006022209.1	PFAM: Metal-dependent hydrolase HDOD; KEGG: son:SO_0615 hypothetical protein
YP_006022210.1	KEGG: shn:Shewana3_0607 peptidase S9 prolyl oligopeptidase
YP_006022211.1	TIGRFAM: Glutamine amidotransferase of anthranilate synthase; KEGG: she:Shewmr4_0607 aminodeoxychorismate synthase, glutamine amidotransferase subunit; PFAM: Glutamine amidotransferase class-I, C-terminal
YP_006022212.1	PFAM: Stringent starvation protein B; KEGG: shm:Shewmr7_3424 ClpXP protease specificity-enhancing factor
YP_006022213.1	PFAM: Glutathione S-transferase, N-terminal; Glutathione S-transferase, C-terminal; KEGG: shw:Sputw3181_0668 stringent starvation protein A
YP_006022214.1	PFAM: Cytochrome c1; KEGG: shm:Shewmr7_3426 cytochrome c1
YP_006022215.1	PFAM: Cytochrome b/b6, N-terminal; Cytochrome b/b6, C-terminal; KEGG: son:SO_0609 ubiquinol-cytochrome c reductase, cytochrome b
YP_006022216.1	TIGRFAM: Ubiquinol-cytochrome c reductase, iron-sulphur subunit; Twin-arginine translocation pathway, signal sequence; KEGG: shn:Shewana3_0601 ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal; Rieske [2Fe-2S] iron-sulphur domain
YP_006022217.1	TIGRFAM: HflC; PFAM: Band 7 protein; KEGG: shm:Shewmr7_3429 HflC protein; SMART: Band 7 protein
YP_006022218.1	TIGRFAM: HflK; PFAM: Band 7 protein; KEGG: shw:Sputw3181_0663 HflK protein; SMART: Band 7 protein
YP_006022219.1	KEGG: shw:Sputw3181_0662 GTP-binding protein, HSR1-related; TIGRFAM: GTP-binding protein, HflX; PFAM: GTP-binding protein, HSR1-related
YP_006022220.1	TIGRFAM: Host factor Hfq; HAMAP: Protein hfq; KEGG: shw:Sputw3181_0661 RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein, core
YP_006022221.1	PFAM: tRNA isopentenyltransferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; KEGG: son:SO_0602 tRNA delta(2)-isopentenylpyrophosphate transferase; HAMAP: tRNA dimethylallyltransferase
YP_006022222.1	TIGRFAM: DNA mismatch repair protein, N-terminal; HAMAP: DNA mismatch repair protein mutL; KEGG: shw:Sputw3181_0659 DNA mismatch repair protein; PFAM: DNA mismatch repair protein, C-terminal; ATP-binding region, ATPase-like; MutL, C-terminal, dimerisation
YP_006022223.1	KEGG: she:Shewmr4_0595 N-acetylmuramoyl-L-alanine amidase; PFAM: Cell wall hydrolase/autolysin, catalytic; Peptidoglycan-binding lysin domain; SMART: Cell wall hydrolase/autolysin, catalytic; Peptidoglycan-binding Lysin subgroup
YP_006022224.1	KEGG: shw:Sputw3181_0657 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0079, ATPase bacteria; PFAM: Uncharacterised protein family UPF0079, ATPase bacteria
YP_006022225.1	KEGG: shw:Sputw3181_0656 carbohydrate kinase, YjeF related protein; TIGRFAM: Uncharacterised protein family, carbohydrate kinase-related; YjeF-related protein, N-terminal; PFAM: Uncharacterised protein family, carbohydrate kinase-related; YjeF-related protein, N-terminal
YP_006022226.1	KEGG: shw:Sputw3181_0655 hypothetical protein
YP_006022227.1	HAMAP: Oligoribonuclease; PFAM: Exonuclease, RNase T/DNA polymerase III; KEGG: shn:Shewana3_0590 oligoribonuclease; SMART: Exonuclease
YP_006022228.1	TIGRFAM: GTPase EngC; HAMAP: ribosome biogenesis GTPase RsgA; KEGG: shw:Sputw3181_0653 ribosome-associated GTPase; PFAM: GTPase EngC
YP_006022229.1	TIGRFAM: Phosphatidylserine decarboxylase; HAMAP: Phosphatidylserine decarboxylase proenzyme; KEGG: she:Shewmr4_0589 phosphatidylserine decarboxylase; PFAM: Phosphatidylserine decarboxylase-related
YP_006022230.1	PFAM: Protein of unknown function DUF6, transmembrane; KEGG: shn:Shewana3_0587 hypothetical protein
YP_006022231.1	PFAM: Mechanosensitive ion channel MscS; KEGG: shm:Shewmr7_3443 MscS mechanosensitive ion channel
YP_006022232.1	PFAM: Glycerophosphoryl diester phosphodiesterase; KEGG: shw:Sputw3181_0649 glycerophosphoryl diester phosphodiesterase
YP_006022233.1	KEGG: shn:Shewana3_0584 hypothetical protein
YP_006022234.1	KEGG: son:SO_0585 D-isomer specific 2-hydroxyacid dehydrogenase family protein; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
YP_006022235.1	TIGRFAM: PAS; PFAM: Chemotaxis methyl-accepting receptor, signalling; PAS fold-3; KEGG: spc:Sputcn32_3294 methyl-accepting chemotaxis sensory transducer; SMART: Chemotaxis methyl-accepting receptor, signalling
YP_006022236.1	PFAM: BFD-like [2Fe-2S]-binding region; KEGG: shn:Shewana3_0581 BFD/(2Fe-2S)-binding domain-containing protein
YP_006022237.1	PFAM: Thiopurine S-methyltransferase; TIGRFAM: thiopurine S-methyltransferase, Se/Te detoxification family; KEGG: shw:Sputw3181_0645 thiopurine S-methyltransferase; HAMAP: Thiopurine S-methyltransferase
YP_006022238.1	KEGG: shw:Sputw3181_0644 hypothetical protein
YP_006022239.1	KEGG: shm:Shewmr7_3451 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: Serine/threonine-protein kinase domain
YP_006022240.1	PFAM: Peptidase M10A/M12B, matrixin/adamalysin; KEGG: shw:Sputw3181_0642 hypothetical protein
YP_006022241.1	TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold-3; PAS fold-4; Cache; Signal transduction response regulator, receiver region; KEGG: shm:Shewmr7_3453 multi-sensor hybrid histidine kinase; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; PAC motif; Signal transduction response regulator, receiver region
YP_006022242.1	KEGG: shn:Shewana3_0575 PhoH family protein; PFAM: PhoH-like protein; SMART: Nucleotide binding protein, PINc; ATPase, AAA+ type, core
YP_006022243.1	HAMAP: RNA polymerase-associated protein rapA; PFAM: SNF2-related; DNA/RNA helicase, C-terminal; KEGG: shw:Sputw3181_0639 ATP-dependent helicase HepA; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal
YP_006022244.1	KEGG: shw:Sputw3181_0638 hypothetical protein
YP_006022245.1	PFAM: Crotonase, core; KEGG: shw:Sputw3181_0637 enoyl-CoA hydratase
YP_006022246.1	KEGG: shm:Shewmr7_3458 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region
YP_006022247.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: spc:Sputcn32_3306 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_006022248.1	PFAM: Protein of unknown function DUF1260; KEGG: shw:Sputw3181_0634 hypothetical protein
YP_006022249.1	TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; KEGG: shw:Sputw3181_0633 1-acyl-sn-glycerol-3-phosphate acyltransferase; SMART: Phospholipid/glycerol acyltransferase
YP_006022250.1	PFAM: ABC-3; KEGG: shw:Sputw3181_0632 ABC-3 protein
YP_006022251.1	PFAM: ABC transporter metal-binding lipoprotein; KEGG: shw:Sputw3181_0631 periplasmic solute binding protein
YP_006022252.1	KEGG: spc:Sputcn32_3311 hypothetical protein
YP_006022253.1	KEGG: spc:Sputcn32_3312 hypothetical protein
YP_006022254.1	KEGG: son:SO_0563 hypothetical protein
YP_006022256.1	KEGG: son:SO_0562 hypothetical protein
YP_006022257.1	PFAM: Mechanosensitive ion channel MscS; KEGG: shn:Shewana3_0561 MscS mechanosensitive ion channel
YP_006022258.1	HAMAP: Formate-tetrahydrofolate ligase, FTHFS; KEGG: spc:Sputcn32_3314 formate--tetrahydrofolate ligase; PFAM: Formate-tetrahydrofolate ligase, FTHFS
YP_006022259.1	PFAM: Aldo/keto reductase; KEGG: she:Shewmr4_0560 aldo/keto reductase
YP_006022260.1	PFAM: MaoC-like dehydratase; KEGG: shn:Shewana3_0558 dehydratase
YP_006022261.1	PFAM: Methyltransferase type 11; KEGG: son:SO_0558 SmtA protein
YP_006022262.1	PFAM: GumN; KEGG: shw:Sputw3181_0624 GumN family protein
YP_006022263.1	KEGG: shn:Shewana3_0555 hypothetical protein
YP_006022264.1	KEGG: shn:Shewana3_0554 diguanylate cyclase/phosphodiesterase; PFAM: Diguanylate phosphodiesterase, predicted; Cystathionine beta-synthase, core; Diguanylate cyclase, predicted; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted
YP_006022265.1	KEGG: shm:Shewmr7_3476 hypothetical protein
YP_006022266.1	KEGG: shm:Shewmr7_3477 hypothetical protein
YP_006022267.1	KEGG: son:SO_0552 hypothetical protein
YP_006022268.1	KEGG: shw:Sputw3181_0619 hypothetical protein
YP_006022269.1	KEGG: shw:Sputw3181_0618 hypothetical protein
YP_006022270.1	KEGG: shw:Sputw3181_0617 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region
YP_006022271.1	KEGG: shw:Sputw3181_0616 histone family protein DNA-binding protein; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein
YP_006022272.1	KEGG: shw:Sputw3181_0615 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02001; PFAM: Conserved hypothetical protein CHP02001
YP_006022273.1	TIGRFAM: S6 modification enzyme RimK; HAMAP: Ribosomal protein S6 modification protein; KEGG: shw:Sputw3181_0614 alpha-L-glutamate ligase; PFAM: ATP-grasp fold, RimK-type
YP_006022274.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; KEGG: shw:Sputw3181_0613 response regulator receiver modulated diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region
YP_006022275.1	KEGG: shw:Sputw3181_0612 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region
YP_006022276.1	TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; CHASE; PAS fold; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; KEGG: shw:Sputw3181_0611 multi-sensor signal transduction histidine kinase; SMART: ATP-binding region, ATPase-like; PAS; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_006022277.1	KEGG: shm:Shewmr7_3488 hypothetical protein
YP_006022278.1	KEGG: shn:Shewana3_0540 hypothetical protein
YP_006022279.1	KEGG: shw:Sputw3181_0609 hypothetical protein; TIGRFAM: Conserved hypothetical protein QEGLA; PFAM: Protein of unknown function DUF1704
YP_006022280.1	KEGG: shw:Sputw3181_0608 amino acid carrier protein; TIGRFAM: Sodium:alanine symporter; PFAM: Sodium:alanine symporter
YP_006022281.1	PFAM: RNA-metabolising metallo-beta-lactamase; KEGG: son:SO_0541 metallo-beta-lactamase family protein
YP_006022282.1	KEGG: son:SO_0540 hypothetical protein
YP_006022283.1	PFAM: Major facilitator superfamily MFS-1; KEGG: son:SO_0539 transporter, putative
YP_006022284.1	SMART: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: son:SO_0538 glyceraldehyde-3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain
YP_006022285.1	KEGG: son:SO_0536 redox-active disulfide protein 2
YP_006022286.1	PFAM: Protein of unknown function DUF318, transmembrane; KEGG: she:Shewmr4_0534 permease
YP_006022287.1	KEGG: son:SO_0532 arsenical resistence operon repressor; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR
YP_006022288.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: shn:Shewana3_0531 lysine exporter protein LysE/YggA
YP_006022289.1	PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: shn:Shewana3_0530 LysR family transcriptional regulator
YP_006022290.1	KEGG: ebi:EbC_27590 transcriptional regulator, AraC family; PFAM: Helix-turn-helix, AraC type; ThiJ/PfpI; SMART: Helix-turn-helix, AraC domain
YP_006022291.1	PFAM: Isochorismatase-like; KEGG: spe:Spro_3108 isochorismatase hydrolase
YP_006022292.1	KEGG: shm:Shewmr7_3501 radical SAM domain-containing protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB
YP_006022293.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: shw:Sputw3181_0604 antibiotic biosynthesis monooxygenase
YP_006022294.1	PFAM: GCN5-related N-acetyltransferase; KEGG: shw:Sputw3181_0603 GCN5-related N-acetyltransferase
YP_006022295.1	KEGG: shm:Shewmr7_3508 EmrB/QacA family drug resistance transporter; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1
YP_006022296.1	PFAM: Secretion protein HlyD; KEGG: shm:Shewmr7_3509 secretion protein HlyD family protein
YP_006022297.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: shn:Shewana3_0521 LysR family transcriptional regulator
YP_006022298.1	TIGRFAM: Large-conductance mechanosensitive channel; HAMAP: Large-conductance mechanosensitive channel; KEGG: shn:Shewana3_0520 large-conductance mechanosensitive channel; PFAM: Large-conductance mechanosensitive channel
YP_006022299.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: shw:Sputw3181_0601 antibiotic biosynthesis monooxygenase
YP_006022300.1	KEGG: spc:Sputcn32_3341 CzcA family heavy metal efflux protein; TIGRFAM: Heavy metal efflux pump CzcA; PFAM: Acriflavin resistance protein
YP_006022301.1	TIGRFAM: Secretion protein HlyD; KEGG: shw:Sputw3181_0599 RND family efflux transporter MFP subunit
YP_006022302.1	KEGG: shw:Sputw3181_0598 outer membrane efflux protein
YP_006022303.1	KEGG: shw:Sputw3181_0597 hypothetical protein
YP_006022304.1	KEGG: shn:Shewana3_0514 hypothetical protein
YP_006022305.1	KEGG: shw:Sputw3181_0595 hypothetical protein
YP_006022306.1	PFAM: Class I peptide chain release factor; KEGG: shw:Sputw3181_0594 peptidyl-tRNA hydrolase domain protein
YP_006022307.1	PFAM: Dehydroquinase, class II; TIGRFAM: Dehydroquinase, class II; HAMAP: Dehydroquinase, class II; KEGG: shw:Sputw3181_0593 3-dehydroquinate dehydratase
YP_006022308.1	KEGG: son:SO_0511 acetyl-CoA carboxylase, biotin carboxyl carrier protein; TIGRFAM: Acetyl-CoA biotin carboxyl carrier; PFAM: Biotin/lipoyl attachment
YP_006022309.1	PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: shw:Sputw3181_0592 short-chain dehydrogenase/reductase SDR
YP_006022310.1	PFAM: Major facilitator superfamily MFS-1; KEGG: she:Shewmr4_0508 major facilitator transporter
YP_006022311.1	KEGG: she:Shewmr4_0507 hypothetical protein
YP_006022312.1	TIGRFAM: Carboxylyase-related; HAMAP: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; KEGG: shw:Sputw3181_0589 UbiD family decarboxylase; PFAM: Carboxylyase-related
YP_006022313.1	KEGG: shw:Sputw3181_0588 FMN reductase; PFAM: Oxidoreductase FAD/NAD(P)-binding
YP_006022314.1	KEGG: spl:Spea_3416 hypothetical protein
YP_006022315.1	PFAM: Amidohydrolase 3; KEGG: son:SO_0990 urease domain-containing protein
YP_006022316.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: son:SO_0989 LysR family transcriptional regulator
YP_006022317.1	PFAM: Flavin reductase-like, FMN-binding; KEGG: spc:Sputcn32_3355 flavoprotein oxygenase
YP_006022318.1	KEGG: eic:NT01EI_1515 hypothetical protein
YP_006022319.1	KEGG: she:Shewmr4_0503 hypothetical protein
YP_006022320.1	PFAM: Flavin reductase-like, FMN-binding; KEGG: spc:Sputcn32_3355 flavoprotein oxygenase
YP_006022321.1	PFAM: Fatty acid cis-trans isomerase; KEGG: shm:Shewmr7_3530 fatty acid cistrans isomerase
YP_006022322.1	KEGG: she:Shewmr4_0499 endothelin-converting protein 1; PFAM: Peptidase M13; Peptidase M13, neprilysin, C-terminal
YP_006022323.1	PFAM: Protein of unknown function DUF2166; KEGG: shw:Sputw3181_0573 hypothetical protein
YP_006022324.1	KEGG: shw:Sputw3181_0572 putative mitomycin resistance protein
YP_006022325.1	PFAM: Uncharacterised protein family UPF0118; KEGG: shw:Sputw3181_0571 hypothetical protein
YP_006022326.1	PFAM: Redoxin; KEGG: shm:Shewmr7_3552 redoxin domain-containing protein
YP_006022327.1	KEGG: shw:Sputw3181_0570 2-nitropropane dioxygenase, NPD; PFAM: 2-nitropropane dioxygenase, NPD
YP_006022328.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mca:MCA2808 hypothetical protein
YP_006022329.1	TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; HAMAP: 4-hydroxybenzoate octaprenyltransferase; KEGG: shw:Sputw3181_0569 4-hydroxybenzoate octaprenyltransferase; PFAM: UbiA prenyltransferase
YP_006022330.1	KEGG: shw:Sputw3181_0568 DNA-dependent helicase II; TIGRFAM: DNA helicase, ATP-dependent, UvrD type; PFAM: DNA helicase, UvrD/REP type
YP_006022331.1	KEGG: aav:Aave_0246 hypothetical protein
YP_006022332.1	KEGG: shw:Sputw3181_0566 hypothetical protein
YP_006022333.1	PFAM: NUDIX hydrolase domain; KEGG: shw:Sputw3181_0565 NUDIX hydrolase
YP_006022334.1	PFAM: Protein of unknown function, zinc metallopeptidase putative; KEGG: shn:Shewana3_0462 protein of unknown function, zinc metallopeptidase putative
YP_006022335.1	KEGG: she:Shewmr4_0465 hypothetical protein
YP_006022336.1	KEGG: son:SO_0461 hypothetical protein
YP_006022337.1	PFAM: Protein of unknown function DUF853, nucleotide triphosphate hydrolase, putative; KEGG: shw:Sputw3181_0564 protein of unknown function DUF853, NPT hydrolase putative
YP_006022338.1	KEGG: shw:Sputw3181_0563 hypothetical protein
YP_006022339.1	TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: shn:Shewana3_0457 response regulator receiver protein
YP_006022340.1	KEGG: spc:Sputcn32_3382 TRAP transporter, 4TM/12TM fusion protein; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit
YP_006022341.1	PFAM: Protein of unknown function DUF1850; KEGG: spc:Sputcn32_3383 hypothetical protein
YP_006022342.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate cyclase, predicted; PAS fold-3; KEGG: she:Shewmr4_0458 diguanylate cyclase with PAS/PAC sensor; SMART: Diguanylate cyclase, predicted; PAC motif
YP_006022343.1	PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; KEGG: son:SO_0453 peptidyl-prolyl cis-trans isomerase FkbP
YP_006022344.1	TIGRFAM: Thioredoxin; KEGG: shw:Sputw3181_0551 thioredoxin; PFAM: Thioredoxin domain
YP_006022345.1	KEGG: shw:Sputw3181_0550 anion transporter; TIGRFAM: Sodium/sulphate symporter; PFAM: Sodium/sulphate symporter
YP_006022346.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spc:Sputcn32_3394 major facilitator transporter
YP_006022347.1	TIGRFAM: Pseudouridine synthase, RsuA and RluB/E/F; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: sse:Ssed_3265 putative ribosomal small subunit pseudouridine synthase A; SMART: RNA-binding S4
YP_006022348.1	KEGG: shn:Shewana3_0444 band 7 protein; PFAM: Band 7 protein; SMART: Band 7 protein
YP_006022349.1	PFAM: Protein of unknown function DUF318, transmembrane; KEGG: she:Shewmr4_0447 permease
YP_006022350.1	TIGRFAM: Zn(II)-responsive transcriptional regulator; PFAM: Transcription regulator MerR, DNA binding; HTH transcriptional regulator, MerR; KEGG: shm:Shewmr7_3583 zinc-responsive transcriptional regulator; SMART: HTH transcriptional regulator, MerR
YP_006022351.1	KEGG: shw:Sputw3181_0542 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme, formylation region; MGS-like; TIGRFAM: AICARFT/IMPCHase bienzyme; HAMAP: Bifunctional purine biosynthesis protein purH; SMART: AICARFT/IMPCHase bienzyme, formylation region
YP_006022352.1	PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain; TIGRFAM: Phosphoribosylglycinamide synthetase; HAMAP: Phosphoribosylglycinamide synthetase; KEGG: shw:Sputw3181_0541 phosphoribosylamine--glycine ligase
YP_006022353.1	KEGG: son:SO_0440 hypothetical protein
YP_006022354.1	KEGG: son:SO_0439 hypothetical protein
YP_006022355.1	KEGG: shn:Shewana3_0437 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_006022357.1	PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: Uroporphyrinogen decarboxylase HemE; HAMAP: Uroporphyrinogen decarboxylase HemE; KEGG: shw:Sputw3181_0537 uroporphyrinogen decarboxylase
YP_006022358.1	PFAM: Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ; KEGG: shn:Shewana3_0434 anti-RNA polymerase sigma 70 factor
YP_006022359.1	TIGRFAM: SecA protein; HAMAP: Protein translocase subunit secA; KEGG: shw:Sputw3181_0398 preprotein translocase subunit SecA; PFAM: SecA DEAD-like; SecA preprotein cross-linking region; SecA Wing/Scaffold; SEC-C motif
YP_006022360.1	PFAM: Peptidase M23; KEGG: shw:Sputw3181_0397 peptidase M23B
YP_006022361.1	PFAM: Protein of unknown function DUF721; KEGG: shw:Sputw3181_0396 hypothetical protein
YP_006022362.1	PFAM: UDP-3-O-acyl N-acetylglucosamine deacetylase; manually curated; TIGRFAM: UDP-3-O-acyl N-acetylglucosamine deacetylase; KEGG: shn:Shewana3_3738 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; HAMAP: UDP-3-O-acyl N-acetylglucosamine deacetylase
YP_006022363.1	KEGG: son:SO_4215 cell division protein FtsZ; TIGRFAM: Cell division protein FtsZ, N-terminal; PFAM: Tubulin/FtsZ, GTPase domain; Tubulin/FtsZ, 2-layer sandwich domain
YP_006022364.1	KEGG: shw:Sputw3181_0393 cell division protein FtsA; TIGRFAM: Cell division protein family FtsA; PFAM: Cell division protein FtsA domain
YP_006022365.1	PFAM: Cell division protein FtsQ; Polypeptide-transport-associated, FtsQ-type; KEGG: shn:Shewana3_3741 polypeptide-transport-associated domain-containing protein
YP_006022366.1	PFAM: Mur ligase, N-terminal; Mur ligase, central; Mur ligase, C-terminal; TIGRFAM: UDP-N-acetylmuramate-alanine ligase; HAMAP: UDP-N-acetylmuramate-alanine ligase; KEGG: shw:Sputw3181_0391 UDP-N-acetylmuramate--L-alanine ligase
YP_006022367.1	KEGG: shw:Sputw3181_0390 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; TIGRFAM: N-acetylglucosaminyltransferase, MurG; PFAM: Glycosyl transferase, family 28; Glycosyl transferase, family 28, C-terminal
YP_006022368.1	KEGG: shn:Shewana3_3744 cell division protein FtsW; TIGRFAM: Cell division protein FtsW; PFAM: Cell cycle protein
YP_006022369.1	TIGRFAM: UDP-N-acetylmuramoylalanine-D-glutamate ligase; HAMAP: UDP-N-acetylmuramoylalanine-D-glutamate ligase; KEGG: son:SO_4221 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; PFAM: Mur ligase, central; Mur ligase, C-terminal
YP_006022370.1	TIGRFAM: Phospho-N-acetylmuramoyl-pentapeptide transferase; HAMAP: Phospho-N-acetylmuramoyl-pentapeptide transferase; KEGG: shw:Sputw3181_0387 phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: Glycosyl transferase, family 4, conserved region; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site
YP_006022371.1	TIGRFAM: UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase; KEGG: shw:Sputw3181_0386 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase; PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal
YP_006022372.1	PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal; TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase; HAMAP: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase; KEGG: shw:Sputw3181_0385 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase
YP_006022373.1	KEGG: shn:Shewana3_3749 peptidoglycan synthetase FtsI; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain
YP_006022374.1	KEGG: she:Shewmr4_3577 cell division protein FtsL; TIGRFAM: Cell division protein, FtsL -like; PFAM: Cell division protein FtsL
YP_006022375.1	TIGRFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW; HAMAP: S-adenosyl-L-methionine-dependent methyltransferase, MraW; KEGG: she:Shewmr4_3578 S-adenosyl-methyltransferase MraW; PFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW
YP_006022376.1	TIGRFAM: MraZ; HAMAP: MraZ; KEGG: shw:Sputw3181_0381 cell division protein MraZ; PFAM: MraZ domain
YP_006022377.1	KEGG: shw:Sputw3181_0380 hypothetical protein
YP_006022378.1	PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal; TIGRFAM: Glycerol kinase; HAMAP: Glycerol kinase; KEGG: shw:Sputw3181_0379 glycerol kinase
YP_006022379.1	PFAM: Membrane protein, aromatic hydrocarbon degradation; KEGG: shw:Sputw3181_0378 aromatic hydrocarbon degradation membrane protein
YP_006022380.1	TIGRFAM: 3-isopropylmalate dehydratase, small subunit region; HAMAP: 3-isopropylmalate dehydratase, small subunit region; KEGG: shw:Sputw3181_0377 isopropylmalate isomerase small subunit; PFAM: Aconitase A/isopropylmalate dehydratase small subunit, swivel
YP_006022381.1	TIGRFAM: 3-isopropylmalate dehydratase, large subunit region; HAMAP: 3-isopropylmalate dehydratase, large subunit region; KEGG: shw:Sputw3181_0376 isopropylmalate isomerase large subunit; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha
YP_006022382.1	PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: Isopropylmalate dehydrogenase; HAMAP: Isopropylmalate dehydrogenase; KEGG: shw:Sputw3181_0375 3-isopropylmalate dehydrogenase
YP_006022383.1	TIGRFAM: Bacterial 2-isopropylmalate synthase; KEGG: shw:Sputw3181_0374 2-isopropylmalate synthase; PFAM: Pyruvate carboxyltransferase; 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
YP_006022384.1	KEGG: shw:Sputw3181_0373 tetratricopeptide domain-containing protein
YP_006022385.1	TIGRFAM: DNA helicase, ATP-dependent, RecQ type, bacterial; DNA helicase, ATP-dependent, RecQ type, N-terminal; PFAM: RQC domain; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; Helicase/RNase D C-terminal, HRDC domain; KEGG: shw:Sputw3181_0372 ATP-dependent DNA helicase RecQ; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; Helicase/RNase D C-terminal, HRDC domain
YP_006022386.1	KEGG: shw:Sputw3181_0371 hypothetical protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily
YP_006022387.1	KEGG: shw:Sputw3181_0370 transporter DMT superfamily protein; TIGRFAM: RarD protein; PFAM: Protein of unknown function DUF6, transmembrane
YP_006022388.1	KEGG: shw:Sputw3181_0369 hypothetical protein
YP_006022389.1	PFAM: Aspartate/glutamate/uridylate kinase; GCN5-related N-acetyltransferase; TIGRFAM: Amino-acid N-acetyltransferase (ArgA); HAMAP: Amino-acid acetyltransferase; KEGG: shw:Sputw3181_0368 N-acetylglutamate synthase
YP_006022390.1	TIGRFAM: Ribosomal protein L33; HAMAP: Ribosomal protein L33; KEGG: shn:Shewana3_3768 50S ribosomal protein L33; PFAM: Ribosomal protein L33
YP_006022391.1	TIGRFAM: Ribosomal protein L28; HAMAP: Ribosomal protein L28; KEGG: shw:Sputw3181_0339 50S ribosomal protein L28; PFAM: Ribosomal protein L28
YP_006022392.1	KEGG: shw:Sputw3181_0338 DNA repair protein RadC; TIGRFAM: DNA repair, RadC-like; PFAM: DNA repair, RadC-like
YP_006022393.1	TIGRFAM: Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; KEGG: spc:Sputcn32_0461 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: DNA/pantothenate metabolism flavoprotein, C-terminal; Flavoprotein
YP_006022394.1	TIGRFAM: DeoxyUTP pyrophosphatase domain, subfamily 1,; KEGG: shn:Shewana3_3772 deoxyuridine 5'-triphosphate nucleotidohydrolase; PFAM: DeoxyUTP pyrophosphatase domain
YP_006022395.1	KEGG: shw:Sputw3181_0335 nucleoid occlusion protein; HAMAP: HTH-type protein slmA; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal
YP_006022396.1	KEGG: shm:Shewmr7_0355 peptidase S9 prolyl oligopeptidase
YP_006022397.1	PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; TIGRFAM: GTP cyclohydrolase I; HAMAP: GTP cyclohydrolase I; KEGG: shw:Sputw3181_0334 GTP cyclohydrolase I
YP_006022398.1	PFAM: Phosphoribosyltransferase; TIGRFAM: Orotate phosphoribosyl transferase; HAMAP: Orotate phosphoribosyltransferase; KEGG: shw:Sputw3181_0333 orotate phosphoribosyltransferase
YP_006022399.1	PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; HAMAP: Ribonuclease phosphorolytic, bacterial-type; KEGG: shw:Sputw3181_0332 ribonuclease PH
YP_006022400.1	KEGG: shw:Sputw3181_0331 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00255; PFAM: YicC-like, N-terminal; Domain of unknown function DUF1732
YP_006022402.1	KEGG: sdn:Sden_0307 HipA-like protein; TIGRFAM: HipA, N-terminal; PFAM: HipA-like, C-terminal; HipA-like, N-terminal
YP_006022403.1	KEGG: sdn:Sden_0306 transciptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3
YP_006022404.1	KEGG: xne:XNC1_0015 hypothetical protein
YP_006022405.1	PFAM: ERCC4 domain; Helix-hairpin-helix motif; KEGG: spc:Sputcn32_3619 ERCC4 domain-containing protein
YP_006022406.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB; HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; KEGG: spc:Sputcn32_3620 nucleotidase; PFAM: Haloacid dehalogenase-like hydrolase
YP_006022407.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: shn:Shewana3_3800 LysR family transcriptional regulator
YP_006022408.1	KEGG: she:Shewmr4_3199 hypothetical protein
YP_006022409.1	KEGG: cch:Cag_1630 hypothetical protein
YP_006022410.1	PFAM: Protein of unknown function DUF262; KEGG: alv:Alvin_1459 hypothetical protein
YP_006022411.1	KEGG: bsu:BSU06060 DNA-methyltransferase (cytosine-specific); TIGRFAM: DNA methylase, C-5 cytosine-specific; PFAM: DNA methylase, C-5 cytosine-specific
YP_006022412.1	PFAM: Filamentation induced by cAMP/death on curing, related; KEGG: spc:Sputcn32_3625 filamentation induced by cAMP protein Fic
YP_006022413.1	KEGG: shw:Sputw3181_3766 hypothetical protein
YP_006022414.1	PFAM: Major facilitator superfamily MFS-1; KEGG: she:Shewmr4_3609 twin-arginine translocation pathway signal
YP_006022415.1	PFAM: Aminoglycoside phosphotransferase; KEGG: shw:Sputw3181_3767 aminoglycoside phosphotransferase
YP_006022416.1	KEGG: she:Shewmr4_3611 hypothetical protein
YP_006022417.1	KEGG: shm:Shewmr7_0331 hypothetical protein
YP_006022418.1	KEGG: shw:Sputw3181_3770 guanylate kinase; PFAM: Guanylate kinase; TIGRFAM: Guanylate kinase, sub-group; HAMAP: Guanylate kinase, sub-group; SMART: Guanylate kinase/L-type calcium channel region
YP_006022419.1	TIGRFAM: DNA-directed RNA polymerase, omega subunit; HAMAP: DNA-directed RNA polymerase, omega subunit; KEGG: shw:Sputw3181_3771 DNA-directed RNA polymerase subunit omega; PFAM: RNA polymerase Rpb6
YP_006022420.1	SMART: Metal-dependent phosphohydrolase, HD region; TIGRFAM: RelA/SpoT protein; KEGG: shw:Sputw3181_3772 bifunctional (p)ppGpp synthetase II/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase; PFAM: RelA/SpoT; Metal-dependent phosphohydrolase, HD region, subdomain; TGS; Amino acid-binding ACT
YP_006022421.1	KEGG: shn:Shewana3_3813 putative endoribonuclease L-PSP; TIGRFAM: YjgF-like protein; PFAM: Endoribonuclease L-PSP
YP_006022422.1	KEGG: son:SO_0355 AMP-binding protein; PFAM: AMP-dependent synthetase/ligase
YP_006022423.1	KEGG: shw:Sputw3181_3775 CaCA family Na(+)/Ca(+) antiporter; TIGRFAM: K+-dependent Na+/Ca+ exchanger-like; PFAM: Sodium/calcium exchanger membrane region
YP_006022424.1	PFAM: Tetratricopeptide TPR-1; KEGG: son:SO_0353 TPR domain-containing protein
YP_006022425.1	PFAM: Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; ATP-binding region, ATPase-like; KEGG: shn:Shewana3_3817 putative signal transduction histidine kinase
YP_006022426.1	KEGG: son:SO_0351 LuxR family DNA-binding response regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal
YP_006022427.1	TIGRFAM: DNA helicase, ATP-dependent, RecG; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; DNA/RNA helicase, C-terminal; KEGG: shw:Sputw3181_0304 ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal
YP_006022428.1	KEGG: shw:Sputw3181_0303 hypothetical protein
YP_006022429.1	KEGG: shw:Sputw3181_0302 hypothetical protein
YP_006022430.1	KEGG: spc:Sputcn32_0447 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase
YP_006022431.1	KEGG: shw:Sputw3181_0300 acyl carrier protein, putative
YP_006022432.1	KEGG: shm:Shewmr7_3677 acyl carrier protein; HAMAP: Acyl carrier protein (ACP); PFAM: Phosphopantetheine-binding
YP_006022433.1	KEGG: shw:Sputw3181_0298 hypothetical protein
YP_006022434.1	PFAM: AMP-dependent synthetase/ligase; KEGG: spc:Sputcn32_0443 hypothetical protein
YP_006022435.1	PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; KEGG: shw:Sputw3181_0296 thioester dehydrase family protein
YP_006022436.1	PFAM: Glycosyl transferase, family 2; Bacterial lipid A biosynthesis acyltransferase; KEGG: spc:Sputcn32_0441 glycosyl transferase family protein
YP_006022437.1	KEGG: spc:Sputcn32_0440 histidine ammonia-lyase; PFAM: Phenylalanine/histidine ammonia-lyase
YP_006022438.1	PFAM: Thioesterase superfamily; KEGG: spc:Sputcn32_0439 thioesterase superfamily protein
YP_006022439.1	KEGG: spc:Sputcn32_0438 hypothetical protein
YP_006022440.1	KEGG: shw:Sputw3181_0291 hypothetical protein
YP_006022441.1	PFAM: Monooxygenase, FAD-binding; KEGG: shw:Sputw3181_0290 monooxygenase, FAD-binding
YP_006022442.1	KEGG: spc:Sputcn32_0435 hypothetical protein
YP_006022443.1	KEGG: spc:Sputcn32_0434 3-oxoacyl-(acyl carrier protein) synthase I; PFAM: Beta-ketoacyl synthase, C-terminal; Beta-ketoacyl synthase, N-terminal
YP_006022444.1	PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; KEGG: spc:Sputcn32_0433 thioester dehydrase family protein
YP_006022445.1	TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase, putative; KEGG: shw:Sputw3181_0286 3-ketoacyl-(acyl-carrier-protein) reductase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_006022446.1	KEGG: spc:Sputcn32_0431 3-oxoacyl-(acyl carrier protein) synthase II; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal
YP_006022447.1	KEGG: shw:Sputw3181_0284 hypothetical protein
YP_006022448.1	TIGRFAM: Prevent-host-death protein; KEGG: shw:Sputw3181_0283 prevent-host-death family protein
YP_006022449.1	PFAM: Plasmid stabilisation system; KEGG: shw:Sputw3181_0282 plasmid stabilization system protein
YP_006022450.1	KEGG: sfr:Sfri_2495 hypothetical protein
YP_006022451.1	KEGG: tdn:Suden_0778 hypothetical protein
YP_006022452.1	PFAM: GCN5-related N-acetyltransferase; KEGG: shw:Sputw3181_0280 GCN5-related N-acetyltransferase
YP_006022453.1	KEGG: shw:Sputw3181_0279 benzoate transporter; TIGRFAM: Benzoate membrane transport protein; PFAM: Benzoate membrane transport protein
YP_006022454.1	KEGG: spc:Sputcn32_0424 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; Cupin 2, conserved barrel; SMART: Helix-turn-helix type 3
YP_006022455.1	KEGG: shn:Shewana3_0318 rhodanese domain-containing protein; PFAM: Rhodanese-like; SMART: Rhodanese-like
YP_006022456.1	KEGG: son:SO_4395 hypothetical protein
YP_006022457.1	PFAM: Flavodoxin-like fold; KEGG: shw:Sputw3181_0277 azoreductase
YP_006022458.1	KEGG: she:Shewmr4_0320 thioesterase domain-containing protein; TIGRFAM: Thioesterase, putative; PFAM: Thioesterase, putative
YP_006022459.1	TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; HAMAP: D-tyrosyl-tRNA(Tyr) deacylase; KEGG: shw:Sputw3181_0273 D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase
YP_006022460.1	KEGG: son:SO_4399 hypothetical protein
YP_006022461.1	KEGG: son:SO_4400 proline iminopeptidase, putative; PFAM: Alpha/beta hydrolase fold-1
YP_006022462.1	TIGRFAM: Ribonuclease BN; HAMAP: UPF0761 membrane protein yihY; KEGG: shm:Shewmr7_3708 ribonuclease BN; PFAM: Ribonuclease BN-related
YP_006022463.1	KEGG: she:Shewmr4_0315 hypothetical protein
YP_006022464.1	KEGG: shn:Shewana3_0309 hypothetical protein
YP_006022465.1	KEGG: shw:Sputw3181_3444 methionine gamma-lyase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme
YP_006022466.1	PFAM: Oxoglutarate/iron-dependent oxygenase; KEGG: shw:Sputw3181_3445 2OG-Fe(II) oxygenase
YP_006022467.1	PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: shw:Sputw3181_0270 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_006022468.1	PFAM: Sulfatase; KEGG: sku:Sulku_2137 sulfatase
YP_006022469.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: shw:Sputw3181_0268 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_006022470.1	KEGG: shw:Sputw3181_0267 GTP-binding protein TypA; TIGRFAM: GTP-binding protein TypA; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal
YP_006022471.1	KEGG: shw:Sputw3181_0266 glutamine synthetase; TIGRFAM: Glutamine synthetase type I; PFAM: Glutamine synthetase, catalytic region; Glutamine synthetase, beta-Grasp
YP_006022472.1	PFAM: Sodium:dicarboxylate symporter; KEGG: shm:Shewmr7_3722 sodium:dicarboxylate symporter
YP_006022473.1	PFAM: Aminotransferase, class V/Cysteine desulfurase; KEGG: shw:Sputw3181_0261 aminotransferase, class V
YP_006022474.1	PFAM: Protein of unknown function DUF1864; KEGG: son:SO_4414 hypothetical protein
YP_006022475.1	KEGG: son:SO_4417 anaerobic C4-dicarboxylate transporter; TIGRFAM: Anaerobic c4-dicarboxylate membrane transporter; PFAM: Anaerobic c4-dicarboxylate membrane transporter
YP_006022476.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: shm:Shewmr7_3727 TetR family transcriptional regulator
YP_006022477.1	KEGG: shn:Shewana3_0291 Zn-dependent hydrolase of the beta-lactamase fold
YP_006022478.1	KEGG: spc:Sputcn32_0404 hypothetical protein
YP_006022479.1	PFAM: Peptidase M23; KEGG: spc:Sputcn32_0403 peptidase M23B
YP_006022480.1	manually curated; KEGG: shw:Sputw3181_0256 hypothetical protein
YP_006022481.1	PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: spc:Sputcn32_0401 TonB-dependent receptor
YP_006022482.1	PFAM: Uncharacterised protein family UPF0057; KEGG: shw:Sputw3181_0254 hypothetical protein
YP_006022483.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: son:SO_4425 GGDEF family protein; SMART: Diguanylate cyclase, predicted
YP_006022484.1	KEGG: spc:Sputcn32_0399 pseudouridine synthase Rlu family protein; TIGRFAM: Pseudouridine synthase, RluA-like; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F
YP_006022485.1	KEGG: son:SO_4427 sensor histidine kinase; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_006022486.1	KEGG: shw:Sputw3181_0251 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region
YP_006022487.1	KEGG: shn:Shewana3_0281 hypothetical protein
YP_006022488.1	KEGG: son:SO_4430 hypothetical protein
YP_006022489.1	PFAM: ABC transporter-like; KEGG: shw:Sputw3181_0249 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_006022490.1	KEGG: shw:Sputw3181_0248 molybdate ABC transporter, inner membrane subunit; TIGRFAM: Molybdate ABC transporter, permease protein; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_006022491.1	TIGRFAM: Molybdenum ABC transporter, periplasmic binding protein; KEGG: she:Shewmr4_0277 molybdenum ABC transporter, periplasmic molybdate-binding protein
YP_006022492.1	PFAM: Molybdopterin biosynthesis MoaE; KEGG: shw:Sputw3181_0246 molybdopterin biosynthesis MoaE
YP_006022493.1	KEGG: shw:Sputw3181_0245 molybdopterin converting factor, subunit 1; TIGRFAM: Molybdopterin converting factor, subunit 1; PFAM: ThiamineS
YP_006022494.1	KEGG: shw:Sputw3181_0244 molybdenum cofactor biosynthesis protein MoaC; TIGRFAM: Molybdopterin cofactor biosynthesis MoaC region; PFAM: Molybdopterin cofactor biosynthesis MoaC region
YP_006022495.1	TIGRFAM: Molybdenum cofactor biosynthesis protein A; PFAM: Molybdenum cofactor synthesis C-terminal; Radical SAM; KEGG: shw:Sputw3181_0243 molybdenum cofactor biosynthesis protein A; SMART: Elongator protein 3/MiaB/NifB
YP_006022496.1	KEGG: spc:Sputcn32_0388 electron-transferring-flavoprotein dehydrogenase; PFAM: Electron transfer flavoprotein-ubiquinone oxidoreductase; FAD dependent oxidoreductase
YP_006022497.1	KEGG: shw:Sputw3181_0241 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; Cache; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_006022498.1	KEGG: shw:Sputw3181_0240 hypothetical protein
YP_006022499.1	PFAM: Molybdenum cofactor sulfurase, C-terminal; Protein of unknown function 3-alpha region; KEGG: shw:Sputw3181_0239 MOSC domain-containing protein
YP_006022500.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: shw:Sputw3181_0238 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_006022501.1	PFAM: Carbohydrate/purine kinase; KEGG: shw:Sputw3181_0237 ribokinase-like domain-containing protein
YP_006022502.1	KEGG: son:SO_4461 hypothetical protein
YP_006022503.1	KEGG: shw:Sputw3181_0236 hypothetical protein
YP_006022504.1	PFAM: Sulphatase-modifying factor; Methyltransferase type 12; KEGG: spc:Sputcn32_0381 hypothetical protein
YP_006022505.1	KEGG: spc:Sputcn32_0380 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; SMART: Chemotaxis methyl-accepting receptor, signalling
YP_006022506.1	PFAM: Protein of unknown function DUF1255; KEGG: shw:Sputw3181_0229 hypothetical protein
YP_006022507.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: shw:Sputw3181_0228 TetR family transcriptional regulator
YP_006022508.1	KEGG: shw:Sputw3181_0227 iron-containing alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, iron-type
YP_006022509.1	PFAM: ThiJ/PfpI; KEGG: shw:Sputw3181_0226 ThiJ/PfpI domain-containing protein
YP_006022510.1	PFAM: Glutathione S-transferase, N-terminal; Glutathione S-transferase, C-terminal; KEGG: svo:SVI_3945 glutathione S-transferase family protein
YP_006022511.1	KEGG: son:SO_4470 hypothetical protein
YP_006022512.1	KEGG: shn:Shewana3_0259 signal transduction histidine kinase, nitrogen specific, NtrB; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold-4; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_006022513.1	TIGRFAM: Signal transduction response regulator, nitrogen regulation NR(I); PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; KEGG: shw:Sputw3181_0221 nitrogen metabolism transcriptional regulator, NtrC, fis family; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core
YP_006022514.1	KEGG: shm:Shewmr7_3765 OmpA domain-containing protein
YP_006022515.1	KEGG: shw:Sputw3181_0220 hypothetical protein
YP_006022516.1	KEGG: shw:Sputw3181_0219 cation diffusion facilitator family transporter; TIGRFAM: Cation efflux protein; PFAM: Cation efflux protein
YP_006022517.1	PFAM: Domain of unknown function, Spy-related; KEGG: she:Shewmr4_0253 protein of unknown function, Spy-related
YP_006022518.1	KEGG: shn:Shewana3_0253 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal
YP_006022519.1	KEGG: son:SO_4478 sensor protein CpxA; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_006022520.1	KEGG: spc:Sputcn32_3530 alcohol dehydrogenase; TIGRFAM: Quinone oxidoreductase putative, YhdH/YhfP; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like
YP_006022521.1	KEGG: spl:Spea_0126 ankyrin
YP_006022522.1	KEGG: swd:Swoo_3394 catalase; PFAM: Catalase related subgroup; Catalase-related immune responsive
YP_006022523.1	KEGG: shw:Sputw3181_0215 fis family GAF modulated sigma54 specific transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; GAF; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core
YP_006022524.1	PFAM: Aldehyde dehydrogenase; KEGG: shw:Sputw3181_0214 aldehyde dehydrogenase
YP_006022525.1	KEGG: shm:Shewmr7_3773 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR
YP_006022526.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: shm:Shewmr7_3774 LysR family transcriptional regulator
YP_006022527.1	KEGG: spc:Sputcn32_0363 hypothetical protein
YP_006022528.1	KEGG: spc:Sputcn32_0362 hypothetical protein
YP_006022529.1	KEGG: shw:Sputw3181_0211 cytochrome b561
YP_006022530.1	PFAM: Protein of unknown function DUF1924; KEGG: shw:Sputw3181_0210 cytochrome c-type protein Shp
YP_006022531.1	PFAM: Dihaem cytochrome c; KEGG: shw:Sputw3181_0209 diheme cytochrome c
YP_006022532.1	PFAM: Peptidase M4, propeptide, PepSY; KEGG: shn:Shewana3_0242 peptidase
YP_006022533.1	KEGG: spc:Sputcn32_0357 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region
YP_006022534.1	KEGG: spc:Sputcn32_0356 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like
YP_006022535.1	PFAM: GCN5-related N-acetyltransferase; KEGG: shw:Sputw3181_0205 GCN5-related N-acetyltransferase
YP_006022536.1	KEGG: shw:Sputw3181_0196 hypothetical protein
YP_006022537.1	PFAM: Domain of unknown function DUF1993; KEGG: shw:Sputw3181_0195 hypothetical protein
YP_006022538.1	PFAM: Redoxin; KEGG: shn:Shewana3_0237 redoxin domain-containing protein
YP_006022539.1	KEGG: shn:Shewana3_0236 cytochrome c biogenesis protein; TIGRFAM: Formate-dependent nitrite reductase complex, subunit nrfF; PFAM: Cytochrome C biogenesis protein CcmH
YP_006022540.1	KEGG: son:SO_0267 thiol:disulfide interchange protein DsbE; TIGRFAM: Periplasmic protein thiol:disulphide oxidoreductase DsbE; PFAM: Redoxin
YP_006022541.1	KEGG: shm:Shewmr7_0229 cytochrome c-type biogenesis protein CcmF; TIGRFAM: Cytochrome c-type biogenesis protein CcmF; PFAM: Cytochrome c assembly protein
YP_006022542.1	KEGG: she:Shewmr4_0233 TPR repeat-containing protein; TIGRFAM: Cytochrome c-type biogenesis protein CcmI; SMART: Tetratricopeptide repeat
YP_006022543.1	PFAM: Cytochrome c, class I; KEGG: shn:Shewana3_0232 cytochrome c, class I
YP_006022544.1	SMART: ATPase, AAA+ type, core; TIGRFAM: ABC transporter, haem export, CcmA; KEGG: shm:Shewmr7_0226 cytochrome c biogenesis protein CcmA; PFAM: ABC transporter-like
YP_006022545.1	KEGG: son:SO_0262 heme exporter protein CcmB; TIGRFAM: Cytochrome c-type biogenesis protein CcmB; PFAM: Cytochrome c-type biogenesis protein CcmB
YP_006022546.1	KEGG: son:SO_0261 heme exporter protein CcmC; TIGRFAM: Cytochrome c-type biogenesis protein CcmC; PFAM: Cytochrome c assembly protein
YP_006022547.1	KEGG: shn:Shewana3_0228 heme exporter protein D (CcmD); TIGRFAM: Haem exporter protein D (CcmD); PFAM: Haem exporter protein D (CcmD)
YP_006022548.1	KEGG: shw:Sputw3181_0184 cytochrome c-type biogenesis protein CcmE; HAMAP: CcmE/CycJ protein; PFAM: CcmE/CycJ protein
YP_006022549.1	KEGG: abo:ABO_1733 hypothetical protein
YP_006022550.1	KEGG: abo:ABO_1732 hypothetical protein
YP_006022551.1	KEGG: hch:HCH_06539 TPR repeat-containing protein; PFAM: Sel1-like; SMART: Sel1-like
YP_006022552.1	PFAM: Bile acid:sodium symporter; KEGG: spc:Sputcn32_3507 bile acid:sodium symporter
YP_006022553.1	KEGG: spc:Sputcn32_3506 coproporphyrinogen III oxidase; PFAM: Radical SAM; HemN, C-terminal; SMART: Elongator protein 3/MiaB/NifB
YP_006022554.1	KEGG: shw:Sputw3181_0401 hypothetical protein
YP_006022555.1	KEGG: son:SO_4522 hypothetical protein
YP_006022556.1	PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: spc:Sputcn32_3503 enterobactin receptor protein
YP_006022557.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: shw:Sputw3181_0404 LysR family transcriptional regulator
YP_006022558.1	PFAM: Patatin; KEGG: shw:Sputw3181_0405 patatin
YP_006022559.1	PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: shw:Sputw3181_0406 LysR family transcriptional regulator
YP_006022560.1	PFAM: Protein of unknown function DUF6, transmembrane; KEGG: spc:Sputcn32_3499 hypothetical protein
YP_006022561.1	KEGG: son:SO_4528 hypothetical protein
YP_006022562.1	KEGG: shw:Sputw3181_0443 RNA methyltransferase; TIGRFAM: RNA methyltransferase TrmH, group 2; PFAM: tRNA/rRNA methyltransferase, SpoU
YP_006022563.1	KEGG: shn:Shewana3_3937 hypothetical protein
YP_006022564.1	KEGG: shw:Sputw3181_0447 peptidase S9 prolyl oligopeptidase
YP_006022565.1	PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; KEGG: shw:Sputw3181_0448 peptidase M16 domain-containing protein
YP_006022566.1	KEGG: shw:Sputw3181_0449 peptidase M16 domain-containing protein; PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal
YP_006022567.1	TIGRFAM: Peptidase M20D, amidohydrolase; KEGG: shn:Shewana3_3941 carboxypeptidase; PFAM: Peptidase M20; Peptidase M20, dimerisation
YP_006022570.1	KEGG: hch:HCH_05536 transcriptional regulator; manually curated; SMART: HTH transcriptional regulator, ArsR
YP_006022571.1	PFAM: NIPSNAP; KEGG: sse:Ssed_1304 NIPSNAP family protein
YP_006022572.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: hch:HCH_05533 extracellular polysaccharide biosynthesis protein
YP_006022573.1	KEGG: svo:SVI_1722 hypothetical protein
YP_006022574.1	PFAM: Methyltransferase type 11; KEGG: shn:Shewana3_3944 methyltransferase type 11
YP_006022575.1	KEGG: she:Shewmr4_3747 hypothetical protein
YP_006022576.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold; KEGG: shw:Sputw3181_3881 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS
YP_006022577.1	PFAM: DTW; KEGG: shw:Sputw3181_3882 DTW domain-containing protein
YP_006022578.1	KEGG: shw:Sputw3181_3883 Bcr/CflA subfamily drug resistance transporter; TIGRFAM: Drug resistance transporter Bcr/CflA subfamily; PFAM: Major facilitator superfamily MFS-1
YP_006022579.1	PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: shw:Sputw3181_3884 LysR family transcriptional regulator
YP_006022580.1	KEGG: shm:Shewmr7_3825 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; Cache; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_006022581.1	KEGG: shm:Shewmr7_3825 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; Cache; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_006022582.1	KEGG: shw:Sputw3181_3886 hypothetical protein
YP_006022583.1	KEGG: shw:Sputw3181_3887 Sel1 domain-containing protein; PFAM: Sel1-like; SMART: Sel1-like
YP_006022584.1	KEGG: shw:Sputw3181_3888 hypothetical protein
YP_006022585.1	KEGG: she:Shewmr4_3756 hypothetical protein
YP_006022586.1	KEGG: shw:Sputw3181_3890 hypothetical protein
YP_006022587.1	PFAM: Metal-dependent hydrolase HDOD; KEGG: shn:Shewana3_3956 putative signal transduction protein
YP_006022588.1	KEGG: spc:Sputcn32_0317 inner membrane protein YjeH; manually curated; PFAM: Amino acid permease-associated region
YP_006022589.1	KEGG: shn:Shewana3_3959 AsnC family transcriptional regulator; PFAM: Transcription regulator, AsnC-type, C-terminal; SMART: Transcription regulator, AsnC-type
YP_006022591.1	KEGG: shw:Sputw3181_3893 polysulphide reductase, NrfD; TIGRFAM: Cytochrome c nitrite reductase, NrfD subunit; PFAM: Polysulphide reductase, NrfD
YP_006022592.1	PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: she:Shewmr4_3763 twin-arginine translocation pathway signal
YP_006022593.1	KEGG: she:Shewmr4_3764 formate-dependent nitrite reductase
YP_006022594.1	KEGG: shw:Sputw3181_3896 hypothetical protein
YP_006022595.1	PFAM: HTH transcriptional regulator, LysR; KEGG: shn:Shewana3_3964 LysR family transcriptional regulator
YP_006022596.1	TIGRFAM: Menaquinone biosynthesis protein MenD; HAMAP: Menaquinone biosynthesis protein MenD; KEGG: spc:Sputcn32_0310 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylate synthase; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding region
YP_006022597.1	TIGRFAM: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; KEGG: shw:Sputw3181_3899 alpha/beta hydrolase fold; PFAM: Alpha/beta hydrolase fold-1
YP_006022598.1	KEGG: spc:Sputcn32_0308 O-succinylbenzoate synthase; TIGRFAM: O-succinylbenzoic acid (OSB) synthetase, gamma proteobacteria/archaea
YP_006022599.1	TIGRFAM: O-succinylbenzoate-CoA ligase; KEGG: shw:Sputw3181_3901 O-succinylbenzoate-CoA ligase; PFAM: AMP-dependent synthetase/ligase
YP_006022600.1	KEGG: shw:Sputw3181_3910 RNA polymerase factor sigma-32; TIGRFAM: RNA polymerase sigma factor RpoH, proteobacteria; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 4
YP_006022601.1	PFAM: Protein of unknown function DUF214, permase predicted; KEGG: son:SO_4584 cell division ABC transporter, permease protein FtsX
YP_006022602.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Cell division ATP-binding protein FtsE; KEGG: shw:Sputw3181_3912 cell division ATP-binding protein FtsE; PFAM: ABC transporter-like
YP_006022603.1	TIGRFAM: Cell division transporter substrate-binding protein FtsY; PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; KEGG: shn:Shewana3_3972 signal recognition particle-docking protein FtsY; SMART: ATPase, AAA+ type, core
YP_006022604.1	TIGRFAM: Conserved hypothetical protein CHP00095; KEGG: spc:Sputcn32_0288 putative methyltransferase; PFAM: Protein of unknown function methylase putative
YP_006022605.1	PFAM: Protein of unknown function DUF1145; KEGG: shw:Sputw3181_3915 hypothetical protein
YP_006022606.1	PFAM: NapC/NirT cytochrome c, N-terminal; KEGG: saz:Sama_3471 tetraheme cytochrome c
YP_006022607.1	KEGG: son:SO_A0158 hypothetical protein
YP_006022608.1	PFAM: Protein of unknown function DUF2057; KEGG: son:SO_A0157 hypothetical protein
YP_006022609.1	KEGG: son:SO_A0156 hypothetical protein
YP_006022610.1	KEGG: son:SO_A0155 hypothetical protein
YP_006022611.1	TIGRFAM: Secretion protein HlyD; KEGG: son:SO_A0154 heavy metal efflux protein, putative
YP_006022612.1	KEGG: son:SO_A0153 CzcA family heavy metal efflux protein; TIGRFAM: Heavy metal efflux pump CzcA; PFAM: Acriflavin resistance protein
YP_006022613.1	PFAM: Ribonuclease T2; KEGG: spc:Sputcn32_3777 ribonuclease T2
YP_006022614.1	KEGG: shn:Shewana3_3985 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_006022615.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: shm:Shewmr7_3859 glyoxalase/bleomycin resistance protein/dioxygenase
YP_006022616.1	KEGG: she:Shewmr4_3787 aromatic amino acid transporter; TIGRFAM: Tryptophan/tyrosine transporter; PFAM: Tryptophan/tyrosine permease
YP_006022617.1	KEGG: she:Shewmr4_3788 glycerol-3-phosphate acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; TIGRFAM: glycerol-3-phosphate O-acyltransferase; HAMAP: Glycerol-3-phosphate acyltransferase; SMART: Phospholipid/glycerol acyltransferase
YP_006022618.1	TIGRFAM: Peptidase S24, LexA repressor; HAMAP: LexA repressor; KEGG: shm:Shewmr7_3862 LexA repressor; PFAM: LexA DNA-binding region; Peptidase S24/S26A/S26B, conserved region
YP_006022619.1	KEGG: shw:Sputw3181_0134 hypothetical protein
YP_006022620.1	KEGG: shm:Shewmr7_3864 cytochrome c oxidase, subunit II; TIGRFAM: Cytochrome c oxidase, subunit II; PFAM: Cytochrome c oxidase subunit II C-terminal; Cytochrome C oxidase subunit II, transmembrane region; Cytochrome c, class I
YP_006022621.1	KEGG: son:SO_4607 cytochrome c oxidase, subunit I; TIGRFAM: Cytochrome c oxidase, subunit I bacterial type; PFAM: Cytochrome c oxidase, subunit I
YP_006022622.1	PFAM: Cytochrome c oxidase assembly protein CtaG/Cox11; KEGG: she:Shewmr4_3793 cytochrome c oxidase assembly protein
YP_006022623.1	PFAM: Cytochrome c oxidase, subunit III; KEGG: shm:Shewmr7_3867 cytochrome c oxidase, subunit III
YP_006022624.1	manually curated; KEGG: swp:swp_4827 hypothetical protein
YP_006022625.1	KEGG: spc:Sputcn32_3786 hypothetical protein
YP_006022626.1	KEGG: son:SO_4612 hypothetical protein
YP_006022627.1	PFAM: Cytochrome oxidase assembly; KEGG: son:SO_4613 cytochrome oxidase assembly protein, putative
YP_006022628.1	TIGRFAM: Protohaem IX farnesyltransferase; HAMAP: Protohaem IX farnesyltransferase; KEGG: shw:Sputw3181_0126 protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase
YP_006022629.1	PFAM: Copper chaperone SCO1/SenC; KEGG: shw:Sputw3181_0125 electron transport protein SCO1/SenC
YP_006022630.1	PFAM: Polysaccharide deacetylase; KEGG: she:Shewmr4_3801 polysaccharide deacetylase
YP_006022631.1	KEGG: spc:Sputcn32_3792 MATE efflux family protein; TIGRFAM: Multi antimicrobial extrusion protein MatE; PFAM: Multi antimicrobial extrusion protein MatE
YP_006022632.1	KEGG: she:Shewmr4_3803 peptidase S9 prolyl oligopeptidase
YP_006022633.1	TIGRFAM: Fe/S biogenesis protein, nfuA; HAMAP: Fe/S biogenesis protein, nfuA; KEGG: shw:Sputw3181_0119 putative DNA uptake protein; PFAM: FeS cluster biogenesis; NIF system FeS cluster assembly, NifU, C-terminal
YP_006022634.1	KEGG: spc:Sputcn32_3800 competence protein ComF
YP_006022635.1	PFAM: Alpha/beta hydrolase fold-1; TIGRFAM: BioH; HAMAP: Carboxylesterase bioH; KEGG: shn:Shewana3_4010 BioH protein
YP_006022636.1	KEGG: she:Shewmr4_3807 hypothetical protein
YP_006022637.1	PFAM: Sulfatase; KEGG: son:SO_4628 sulfatase
YP_006022638.1	KEGG: spc:Sputcn32_3804 RNA-binding S1 domain-containing protein; PFAM: Tex-like protein, N-terminal; Ribosomal protein S1, RNA binding domain; SMART: Resolvase, RNase H-like fold
YP_006022639.1	TIGRFAM: Transcription elongation factor GreB, prokaryotic; HAMAP: Transcription elongation factor greA; KEGG: she:Shewmr4_3810 transcription elongation factor GreB; PFAM: Transcription elongation factor, GreA/GreB region, prokaryotic
YP_006022640.1	PFAM: Cytotoxic necrotizing factor; KEGG: yen:YE2091 hypothetical protein
YP_006022641.1	PFAM: Lipase, GDSL; KEGG: cvi:CV_2266 SPI2 translocated effector
YP_006022642.1	PFAM: Transposase, IS4-like; KEGG: asa:ASA_P4G164 transposase
YP_006022643.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: esc:Entcl_3275 transcriptional regulator, LysR family
YP_006022644.1	PFAM: Signal transduction response regulator, C-terminal; KEGG: vpa:VPA1348 putative transcriptional activator ToxR
YP_006022645.1	PFAM: Surface presentation of antigen (SpoA); KEGG: pay:PAU_03444 hypothetical protein
YP_006022646.1	KEGG: vpa:VPA1350 hypothetical protein
YP_006022647.1	KEGG: pay:PAU_03446 hypothetical protein
YP_006022648.1	KEGG: pay:PAU_03447 hypothetical protein
YP_006022649.1	PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: vpa:VPA1353 putative outer membrane protein
YP_006022650.1	PFAM: Type III secretion exporter; KEGG: vpa:VPA1354 putative type III secretion system EscU protein
YP_006022651.1	PFAM: Type III secretion system FHIPEP; KEGG: vpa:VPA1355 putative type III secretion system EscV protein
YP_006022652.1	KEGG: vpa:VPA1356 hypothetical protein
YP_006022653.1	KEGG: hsa:4583 mucin 2, oligomeric mucus/gel-forming
YP_006022655.1	KEGG: pay:PAU_03453 hypothetical protein
YP_006022656.1	KEGG: vpa:VPA1359 hypothetical protein
YP_006022657.1	KEGG: vpa:VPA1360 hypothetical protein
YP_006022658.1	KEGG: vpa:VPA1361 hypothetical protein
YP_006022659.1	KEGG: pay:PAU_03457 hypothetical protein
YP_006022660.1	KEGG: pay:PAU_03458 hypothetical protein
YP_006022661.1	KEGG: vpa:VPA1345 hypothetical protein
YP_006022662.1	KEGG: pay:PAU_03460 putative two-component response regulator
YP_006022663.1	KEGG: pay:PAU_03461 putative two-component response regulator
YP_006022664.1	KEGG: vpa:VPA1367 putative type III secretion system lipoprotein precursor EprK
YP_006022665.1	KEGG: pay:PAU_03463 hypothetical protein; TIGRFAM: Type III secretion system, YscI/HrpB; PFAM: Type III secretion system, YscI/HrpB-like
YP_006022666.1	KEGG: hde:HDEF_1175 hypothetical protein
YP_006022667.1	KEGG: vpa:VPA1334 hypothetical protein
YP_006022668.1	KEGG: vpa:VPA1335 putative type III secretion apparatus protein
YP_006022669.1	KEGG: api:100169432 hypothetical protein LOC100169432
YP_006022670.1	manually curated; KEGG: pay:PAU_03468 hypothetical protein
YP_006022671.1	KEGG: vpa:VPA1338 putative ATPase YscN; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; SMART: ATPase, AAA+ type, core
YP_006022672.1	PFAM: Type II/III secretion system; NolW-like; KEGG: vpa:VPA1339 putative type III secretion system EscC protein
YP_006022674.1	KEGG: vpa:VPA1341 putative Spa29, component of the Mxi-Spa secretion machinery
YP_006022675.1	PFAM: Type III secretion system inner membrane P protein; KEGG: vpa:VPA1342 type III secretion system protein
YP_006022676.1	KEGG: pay:PAU_03474 hypothetical protein
YP_006022677.1	PFAM: Peptidase C58, Yersinia/Haemophilus virulence surface antigen
YP_006022678.1	KEGG: vpa:VPA1328 hypothetical protein
YP_006022680.1	PFAM: Signal transduction response regulator, C-terminal; KEGG: vpa:VPA1348 putative transcriptional activator ToxR
YP_006022681.1	KEGG: vpa:VPA1370 hypothetical protein; PFAM: Actin-binding WH2; SMART: Actin-binding WH2
YP_006022682.1	KEGG: hde:HDEF_0883 hypothetical protein
YP_006022683.1	PFAM: Transcription elongation factor, GreA/GreB region, prokaryotic; KEGG: shn:Shewana3_4014 transcription elongation factor GreB
YP_006022684.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; KEGG: shn:Shewana3_4015 response regulator receiver modulated diguanylate cyclase; SMART: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region
YP_006022685.1	TIGRFAM: PAS; PFAM: CHASE; PAS fold-4; PAS fold; PAS fold-3; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; ATP-binding region, ATPase-like; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, phosphotransfer (Hpt) region; KEGG: shn:Shewana3_4016 putative PAS/PAC sensor protein; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; PAC motif; Signal transduction response regulator, receiver region
YP_006022686.1	KEGG: son:SO_4633 osmolarity response regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region
YP_006022687.1	KEGG: she:Shewmr4_3812 osmolarity sensor protein; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain
YP_006022688.1	KEGG: shn:Shewana3_4019 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_006022689.1	PFAM: Redoxin; KEGG: shn:Shewana3_4020 redoxin domain-containing protein
YP_006022690.1	KEGG: shm:Shewmr7_3906 hypothetical protein
YP_006022691.1	PFAM: Peptidase M4, propeptide, PepSY; KEGG: shn:Shewana3_4024 peptidase
YP_006022692.1	KEGG: spc:Sputcn32_3852 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region
YP_006022693.1	KEGG: spc:Sputcn32_3853 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like
YP_006022694.1	KEGG: shw:Sputw3181_0099 hypothetical protein
YP_006022695.1	KEGG: she:Shewmr4_3820 hypothetical protein
YP_006022696.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold; MASE1; CHASE; PAS fold-4; KEGG: shw:Sputw3181_0097 diguanylate cyclase/phosphodiesterase with PAS/PAC and CHASE sensor(s); SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS; PAC motif
YP_006022697.1	KEGG: shw:Sputw3181_0096 hypothetical protein
YP_006022698.1	KEGG: shw:Sputw3181_0095 ubiquinol oxidase, subunit II; TIGRFAM: Cytochrome o ubiquinol oxidase subunit II; PFAM: COX aromatic rich; Cytochrome c oxidase subunit II C-terminal
YP_006022699.1	KEGG: shn:Shewana3_4032 cytochrome c oxidase, subunit I; TIGRFAM: Cytochrome o ubiquinol oxidase, subunit I; PFAM: Cytochrome c oxidase, subunit I
YP_006022700.1	KEGG: shw:Sputw3181_0093 cytochrome c oxidase, subunit III; TIGRFAM: Cytochrome o ubiquinol oxidase, subunit III; PFAM: Cytochrome c oxidase, subunit III
YP_006022701.1	KEGG: shw:Sputw3181_0092 cytochrome c oxidase subunit IV; TIGRFAM: Cytochrome o ubiquinol oxidase subunit IV; PFAM: Cytochrome C oxidase subunit IV prokaryotic
YP_006022702.1	TIGRFAM: Protohaem IX farnesyltransferase; HAMAP: Protohaem IX farnesyltransferase; KEGG: shw:Sputw3181_0091 protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase
YP_006022703.1	PFAM: Methyltransferase type 11; KEGG: pdi:BDI_3911 putative methyltransferase
YP_006022704.1	PFAM: Redoxin; KEGG: shw:Sputw3181_3956 redoxin domain-containing protein
YP_006022705.1	PFAM: DSBA oxidoreductase; KEGG: shw:Sputw3181_3957 DsbA oxidoreductase
YP_006022706.1	KEGG: shw:Sputw3181_3958 putative suppressor for copper-sensitivity B precursor
YP_006022707.1	KEGG: spc:Sputcn32_0112 3-ketoacyl-(acyl-carrier-protein) reductase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_006022708.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spc:Sputcn32_0111 LysR family transcriptional regulator
YP_006022709.1	KEGG: vsp:VS_II0508 acetyltransferase
YP_006022710.1	KEGG: hch:HCH_02014 amino acid ABC transporter periplasmic protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3
YP_006022712.1	KEGG: ppg:PputGB1_0695 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2
YP_006022713.1	PFAM: FecR protein; KEGG: bur:Bcep18194_A5452 putative FecR
YP_006022714.1	PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal; KEGG: oan:Oant_3795 TonB-dependent receptor
YP_006022716.1	PFAM: PepSY-associated TM helix; KEGG: nha:Nham_3721 PepSY-associated TM helix
YP_006022717.1	KEGG: dac:Daci_3076 hypothetical protein
YP_006022718.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: tkm:TK90_0438 MotA/TolQ/ExbB proton channel
YP_006022719.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: tkm:TK90_0439 biopolymer transport protein ExbD/TolR
YP_006022720.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: tkm:TK90_0440 biopolymer transport protein ExbD/TolR
YP_006022721.1	KEGG: gpb:HDN1F_36930 TonB-like protein; TIGRFAM: TonB, C-terminal; PFAM: Gram-negative bacterial tonB protein
YP_006022722.1	KEGG: shw:Sputw3181_3966 hypothetical protein; HAMAP: Protein of unknown function DUF548; PFAM: Protein of unknown function DUF548
YP_006022723.1	PFAM: Protein of unknown function DUF519; KEGG: spc:Sputcn32_0098 hypothetical protein
YP_006022724.1	PFAM: Lytic transglycosylase-like, catalytic; KEGG: shw:Sputw3181_3969 lytic transglycosylase, catalytic
YP_006022725.1	KEGG: son:SO_4661 hypothetical protein
YP_006022726.1	PFAM: LemA; KEGG: son:SO_4662 hypothetical protein
YP_006022727.1	PFAM: AbgT putative transporter; KEGG: she:Shewmr4_3833 AbgT putative transporter
YP_006022728.1	KEGG: shm:Shewmr7_3927 hypothetical protein
YP_006022729.1	KEGG: shn:Shewana3_4044 hypothetical protein
YP_006022730.1	KEGG: shw:Sputw3181_3974 hydrophobe/amphiphile efflux-1 (HAE1) family protein; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; PFAM: Acriflavin resistance protein
YP_006022731.1	KEGG: shw:Sputw3181_3975 RND family efflux transporter MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_006022732.1	KEGG: shn:Shewana3_4047 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02001; PFAM: Conserved hypothetical protein CHP02001
YP_006022733.1	PFAM: Methyladenine glycosylase; KEGG: shm:Shewmr7_3932 3-methyladenine DNA glycosylase
YP_006022734.1	PFAM: Glutathione S-transferase, C-terminal; Glutathione S-transferase, N-terminal; KEGG: spc:Sputcn32_0089 glutathione S-transferase domain-containing protein
YP_006022735.1	KEGG: shw:Sputw3181_3977 hypothetical protein
YP_006022736.1	KEGG: shw:Sputw3181_3978 oligopeptidase A; PFAM: Peptidase M3A/M3B, thimet/oligopeptidase F
YP_006022737.1	KEGG: shw:Sputw3181_3979 hypothetical protein
YP_006022738.1	KEGG: spc:Sputcn32_0085 hypothetical protein
YP_006022739.1	TIGRFAM: Glutathione reductase, animal/bacterial; KEGG: shw:Sputw3181_3981 glutathione reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation
YP_006022740.1	PFAM: Protein of unknown function DUF1656; KEGG: mmw:Mmwyl1_1290 hypothetical protein
YP_006022741.1	PFAM: Secretion protein HlyD; KEGG: abo:ABO_1136 efflux transporter, membrane fusion protein, putative
YP_006022742.1	PFAM: Fusaric acid resistance protein conserved region; KEGG: mmw:Mmwyl1_1292 fusaric acid resistance protein region
YP_006022744.1	KEGG: shw:Sputw3181_3994 sodium/proline symporter; TIGRFAM: Sodium/proline symporter; Sodium/solute symporter, subgroup; PFAM: Sodium/solute symporter
YP_006022745.1	TIGRFAM: Glutamate 5-kinase, ProB-related; HAMAP: Glutamate 5-kinase; KEGG: shw:Sputw3181_3995 gamma-glutamyl kinase; PFAM: Aspartate/glutamate/uridylate kinase
YP_006022746.1	PFAM: Aldehyde dehydrogenase; TIGRFAM: Gamma-glutamyl phosphate reductase GPR; HAMAP: Glutamate-5-semialdehyde dehydrogenase; KEGG: spc:Sputcn32_0081 gamma-glutamyl phosphate reductase
YP_006022747.1	KEGG: shw:Sputw3181_0087 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3
YP_006022748.1	PFAM: Malate synthase-like, core; KEGG: shw:Sputw3181_0086 malate synthase
YP_006022749.1	PFAM: Uncharacterised protein family UPF0324, prokaryote; KEGG: shw:Sputw3181_0085 hypothetical protein
YP_006022750.1	manually curated; KEGG: spc:Sputcn32_3869 hypothetical protein
YP_006022751.1	SMART: Transcription regulator LuxR, C-terminal; KEGG: shn:Shewana3_4063 LuxR family transcriptional regulator
YP_006022752.1	KEGG: shm:Shewmr7_3949 hypothetical protein
YP_006022753.1	KEGG: shn:Shewana3_4065 hypothetical protein
YP_006022754.1	KEGG: shn:Shewana3_4066 CzcA family heavy metal efflux protein; TIGRFAM: Heavy metal efflux pump CzcA; PFAM: Acriflavin resistance protein
YP_006022755.1	KEGG: shn:Shewana3_4067 hypothetical protein
YP_006022756.1	PFAM: Paraquat-inducible protein A; KEGG: shw:Sputw3181_0083 paraquat-inducible protein A
YP_006022757.1	KEGG: son:SO_4711 HD domain-containing protein; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region
YP_006022758.1	KEGG: shm:Shewmr7_3955 hypothetical protein
YP_006022759.1	KEGG: she:Shewmr4_3863 hypothetical protein
YP_006022760.1	KEGG: shm:Shewmr7_3957 hypothetical protein
YP_006022761.1	PFAM: Cobalt transport protein; KEGG: she:Shewmr4_3865 cobalt transport protein
YP_006022762.1	KEGG: shm:Shewmr7_3959 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core
YP_006022763.1	PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; KEGG: she:Shewmr4_3867 TonB-dependent receptor, plug
YP_006022764.1	TIGRFAM: Isochorismate synthase; KEGG: shw:Sputw3181_0080 isochorismate synthase; PFAM: Chorismate binding, C-terminal
YP_006022765.1	KEGG: spc:Sputcn32_3874 hypothetical protein
YP_006022766.1	KEGG: shw:Sputw3181_0078 hypothetical protein; TIGRFAM: Protein of unknown function DUF165; PFAM: Protein of unknown function DUF165
YP_006022767.1	KEGG: she:Shewmr4_3871 acetyltransferase
YP_006022768.1	KEGG: shn:Shewana3_4075 ATPase domain-containing protein; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_006022769.1	KEGG: shw:Sputw3181_0075 two component, sigma54 specific, fis family transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core
YP_006022770.1	PFAM: Bacterial extracellular solute-binding, family 1; KEGG: shn:Shewana3_4077 extracellular solute-binding protein
YP_006022771.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: shw:Sputw3181_0073 binding-protein-dependent transport systems inner membrane component
YP_006022772.1	KEGG: shw:Sputw3181_0072 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core
YP_006022773.1	KEGG: shw:Sputw3181_0071 molybdopterin-guanine dinucleotide biosynthesis protein A; TIGRFAM: Molybdopterin-guanine dinucleotide biosynthesis protein A; HAMAP: Molybdopterin-guanine dinucleotide biosynthesis protein A
YP_006022774.1	KEGG: shw:Sputw3181_0070 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MoeA; TIGRFAM: Molybdopterin-guanine dinucleotide biosynthesis MobB region; Molybdenum cofactor synthesis; PFAM: MoeA, N-terminal region, domain I/II; Molybdopterin-guanine dinucleotide biosynthesis MobB region; Molybdopterin binding; MoeA, C-terminal, domain IV
YP_006022775.1	TIGRFAM: Molybdenum cofactor biosynthesis protein A; PFAM: Molybdenum cofactor synthesis C-terminal; Radical SAM; KEGG: shw:Sputw3181_0069 molybdenum cofactor biosynthesis protein A; SMART: Elongator protein 3/MiaB/NifB
YP_006022776.1	KEGG: shw:Sputw3181_0068 hypothetical protein
YP_006022777.1	PFAM: DNA glycosylase/AP lyase, catalytic domain; DNA glycosylase/AP lyase, H2TH DNA-binding; TIGRFAM: DNA glycosylase/AP lyase; HAMAP: Formamidopyrimidine-DNA glycosylase; KEGG: shw:Sputw3181_0067 formamidopyrimidine-DNA glycosylase
YP_006022778.1	PFAM: Glycosyl transferase, family 2; KEGG: shw:Sputw3181_0064 glycosyl transferase family protein
YP_006022779.1	TIGRFAM: Nucleotide sugar dehydrogenase; KEGG: shw:Sputw3181_0063 UDP-glucose/GDP-mannose dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, C-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation
YP_006022780.1	KEGG: shw:Sputw3181_0062 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase
YP_006022781.1	KEGG: shw:Sputw3181_0061 hypothetical protein
YP_006022782.1	TIGRFAM: Coenzyme A biosynthesis protein; Cytidyltransferase-related; KEGG: son:SO_4684 phosphopantetheine adenylyltransferase; PFAM: Cytidylyltransferase
YP_006022783.1	TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: tmz:Tmz1t_3778 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase
YP_006022784.1	PFAM: Glycosyl transferase, group 1; KEGG: pha:PSHAa2452 glycosyl transferase
YP_006022785.1	PFAM: Glycosyl transferase, family 2; KEGG: swd:Swoo_0073 glycosyl transferase family protein
YP_006022786.1	KEGG: rba:RB9243 glycosyltransferase
YP_006022787.1	KEGG: saz:Sama_0103 hypothetical protein
YP_006022788.1	PFAM: Glycosyl transferase, family 9; KEGG: spc:Sputcn32_3897 glycosyl transferase family protein
YP_006022789.1	KEGG: spc:Sputcn32_3898 3-deoxy-D-manno-octulosonic-acid kinase; HAMAP: 3-deoxy-D-manno-octulosonic acid kinase; PFAM: Lipopolysaccharide kinase
YP_006022790.1	PFAM: Three-deoxy-D-manno-octulosonic-acid transferase, N-terminal; KEGG: shw:Sputw3181_0052 3-deoxy-D-manno-octulosonic-acid transferase domain-containing protein
YP_006022791.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: spc:Sputcn32_3900 TetR family transcriptional regulator
YP_006022792.1	TIGRFAM: 2-amino-3-ketobutyrate coenzyme A ligase; KEGG: shw:Sputw3181_0050 2-amino-3-ketobutyrate coenzyme A ligase; PFAM: Aminotransferase, class I/II
YP_006022793.1	PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, zinc-binding; TIGRFAM: L-threonine 3-dehydrogenase; HAMAP: L-threonine 3-dehydrogenase; KEGG: shw:Sputw3181_0049 L-threonine 3-dehydrogenase
YP_006022794.1	PFAM: Rhodanese-like; KEGG: shw:Sputw3181_0048 rhodanese domain-containing protein; SMART: Rhodanese-like
YP_006022795.1	KEGG: spc:Sputcn32_3904 rhomboid family protein; PFAM: Peptidase S54, rhomboid
YP_006022796.1	PFAM: ThiJ/PfpI; KEGG: shw:Sputw3181_0046 isoprenoid biosynthesis protein with amidotransferase-like domain
YP_006022797.1	TIGRFAM: DNA polymerase 1; PFAM: DNA-directed DNA polymerase, family A, palm domain; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; 3'-5' exonuclease; KEGG: spc:Sputcn32_3906 DNA polymerase I; SMART: 5'-3' exonuclease, N-terminal; Helix-hairpin-helix motif, class 2; 3'-5' exonuclease; DNA-directed DNA polymerase, family A, palm domain
YP_006022798.1	TIGRFAM: GTP-binding protein, ribosome biogenesis, YsxC; HAMAP: GTP-binding protein, ribosome biogenesis, YsxC; KEGG: spc:Sputcn32_3907 ribosome biogenesis GTP-binding protein YsxC; PFAM: GTP-binding protein, HSR1-related
YP_006022799.1	PFAM: Cytochrome c, class I; KEGG: shn:Shewana3_4111 cytochrome c, class I
YP_006022800.1	KEGG: shw:Sputw3181_0042 hypothetical protein
YP_006022801.1	KEGG: spc:Sputcn32_3911 hypothetical protein; HAMAP: UPF0241 protein yihI; PFAM: Protein of unknown function DUF414
YP_006022802.1	PFAM: Domain of unknown function DUF2489; KEGG: shw:Sputw3181_0040 hypothetical protein
YP_006022803.1	TIGRFAM: Oxygen-independent coproporphyrinogen III oxidase HemN; PFAM: HemN, C-terminal; Radical SAM; KEGG: son:SO_4730 coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB
YP_006022804.1	PFAM: Adenosine/AMP deaminase; TIGRFAM: Adenosine deaminase; HAMAP: Adenosine deaminase; KEGG: shw:Sputw3181_0038 adenosine deaminase
YP_006022805.1	PFAM: Protein of unknown function DUF885, bacterial; KEGG: shw:Sputw3181_0037 hypothetical protein
YP_006022806.1	KEGG: shw:Sputw3181_0036 alpha/beta hydrolase fold; PFAM: Alpha/beta hydrolase fold-1
YP_006022807.1	TIGRFAM: PAS; PFAM: Diguanylate phosphodiesterase, predicted; PAS fold-3; HAMP linker domain; Diguanylate cyclase, predicted; KEGG: spc:Sputcn32_3917 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, predicted; PAC motif; PAS; Diguanylate cyclase, predicted
YP_006022808.1	KEGG: she:Shewmr4_3916 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; TIGRFAM: Cytochrome c oxidase cbb3 type, accessory protein FixG; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup
YP_006022809.1	KEGG: shw:Sputw3181_4045 hypothetical protein
YP_006022810.1	TIGRFAM: Naphthoate synthase; KEGG: shw:Sputw3181_4046 naphthoate synthase; PFAM: Crotonase, core
YP_006022811.1	PFAM: Protein of unknown function DUF2061, membrane; KEGG: shw:Sputw3181_4047 hypothetical protein
YP_006022812.1	PFAM: Glutamine amidotransferase, class-II; Sugar isomerase (SIS); TIGRFAM: Glucosamine-fructose-6-phosphate aminotransferase, isomerising; HAMAP: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; KEGG: shw:Sputw3181_4048 glucosamine--fructose-6-phosphate aminotransferase
YP_006022813.1	KEGG: shw:Sputw3181_4049 DeoR family transcriptional regulator; PFAM: HTH transcriptional regulator, DeoR; HTH transcriptional regulator, DeoR N-terminal; SMART: HTH transcriptional regulator, DeoR N-terminal
YP_006022814.1	KEGG: shw:Sputw3181_4050 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug
YP_006022815.1	PFAM: Nucleotidyl transferase; Bacterial transferase hexapeptide repeat; TIGRFAM: Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase; HAMAP: Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase; KEGG: shw:Sputw3181_4051 UDP-N-acetylglucosamine pyrophosphorylase
YP_006022816.1	TIGRFAM: ATPase, F1 complex, delta/epsilon subunit; HAMAP: ATPase, F1 complex, delta/epsilon subunit; KEGG: shn:Shewana3_4129 F0F1 ATP synthase subunit epsilon; PFAM: ATPase, F1 complex, delta/epsilon subunit, N-terminal; ATPase, F1 complex, delta/epsilon subunit, C-terminal
YP_006022817.1	SMART: ATPase, AAA+ type, core; TIGRFAM: ATPase, F1 complex, beta subunit; KEGG: shw:Sputw3181_4053 F0F1 ATP synthase subunit beta; HAMAP: ATPase, F1 complex, beta subunit; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal
YP_006022818.1	TIGRFAM: ATPase, F1 complex, gamma subunit; HAMAP: ATP synthase gamma chain; KEGG: shn:Shewana3_4131 F0F1 ATP synthase subunit gamma; PFAM: ATPase, F1 complex, gamma subunit
YP_006022819.1	TIGRFAM: ATPase, F1 complex, alpha subunit; HAMAP: ATPase, F1 complex, alpha subunit; KEGG: shw:Sputw3181_4055 F0F1 ATP synthase subunit alpha; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal
YP_006022820.1	TIGRFAM: ATPase, F1 complex, OSCP/delta subunit; HAMAP: ATPase, F1 complex, OSCP/delta subunit; KEGG: son:SO_4750 F0F1 ATP synthase subunit delta; PFAM: ATPase, F1 complex, OSCP/delta subunit
YP_006022821.1	TIGRFAM: ATPase, F0 complex, subunit B, bacterial; HAMAP: ATP synthase subunit b; KEGG: son:SO_4751 F0F1 ATP synthase subunit B; PFAM: ATPase, F0 complex, subunit B/B', bacterial/chloroplast
YP_006022822.1	TIGRFAM: ATPase, F0 complex, subunit C, bacterial/chloroplast; HAMAP: ATPase, F0 complex, subunit C; KEGG: shn:Shewana3_4135 F0F1 ATP synthase subunit C; PFAM: ATPase, F0/V0 complex, subunit C
YP_006022823.1	TIGRFAM: ATPase, F0 complex, subunit A; HAMAP: ATP synthase subunit a; KEGG: shm:Shewmr7_4023 F0F1 ATP synthase subunit A; PFAM: ATPase, F0 complex, subunit A
YP_006022824.1	PFAM: ATPase, F0 complex, subunit I, proteobacteria-type; KEGG: son:SO_4754 ATP synthase protein I
YP_006022825.1	TIGRFAM: ParB-like partition protein; PFAM: ParB-like nuclease; KEGG: shw:Sputw3181_4061 ParB-like partition protein; SMART: ParB-like nuclease
YP_006022826.1	PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: shw:Sputw3181_4062 cobyrinic acid a,c-diamide synthase
YP_006022827.1	TIGRFAM: rRNA small subunit methyltransferase G; HAMAP: rRNA small subunit methyltransferase G; KEGG: son:SO_4757 16S rRNA methyltransferase GidB; PFAM: rRNA small subunit methyltransferase G
YP_006022828.1	TIGRFAM: Glucose-inhibited division protein A; HAMAP: Glucose-inhibited division protein A; KEGG: shw:Sputw3181_4064 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; PFAM: Glucose-inhibited division protein A-related
YP_006022830.1	PFAM: Flavodoxin/nitric oxide synthase; KEGG: slo:Shew_3857 flavodoxin
YP_006022831.1	TIGRFAM: tRNA modification GTPase TrmE; Small GTP-binding protein; HAMAP: tRNA modification GTPase TrmE; KEGG: son:SO_0003 tRNA modification GTPase TrmE; PFAM: GTP-binding protein TrmE, N-terminal; GTP-binding protein, HSR1-related
YP_006022832.1	TIGRFAM: Membrane insertion protein, OxoA/YidC, N-terminal; Membrane insertion protein, OxaA/YidC, core; HAMAP: Membrane protein oxaA; KEGG: shw:Sputw3181_4092 60 kDa inner membrane insertion protein; PFAM: Membrane insertion protein, OxaA/YidC
YP_006022833.1	PFAM: Protein of unknown function DUF37; manually curated; TIGRFAM: Protein of unknown function DUF37; KEGG: shw:Sputw3181_4093 hypothetical protein; HAMAP: Protein of unknown function DUF37
YP_006022834.1	PFAM: Ribonuclease P; manually curated; TIGRFAM: Ribonuclease P; KEGG: shn:Shewana3_0008 ribonuclease P; HAMAP: Ribonuclease P
YP_006022835.1	TIGRFAM: Ribosomal protein L34; HAMAP: 50S ribosomal protein L34; KEGG: svo:SVI_0030 50S ribosomal protein L34; PFAM: Ribosomal protein L34
YP_006022836.1	KEGG: fjo:Fjoh_3534 hypothetical protein
YP_006022837.1	KEGG: fjo:Fjoh_3535 hypothetical protein
YP_006022839.1	KEGG: fbc:FB2170_01990 hypothetical protein
YP_006022840.1	KEGG: shw:Sputw3181_1496 histone family protein nucleoid-structuring protein H-NS; PFAM: Histone-like nucleoid-structuring protein H-NS; SMART: Histone-like nucleoid-structuring protein H-NS
YP_006022841.1	PFAM: ParB-like nuclease; KEGG: son:SO_A0031 ParB family partitioning protein
YP_006022842.1	KEGG: maq:Maqu_2667 HicA protein
YP_006022843.1	KEGG: maq:Maqu_2668 HicB family protein
YP_006022844.1	KEGG: son:SO_A0033 hypothetical protein
YP_006022845.1	PFAM: Domain of unknown function DUF1738; KEGG: sew:SeSA_B0128 antirestriction protein
YP_006022846.1	KEGG: vha:VIBHAR_p08169 type I restriction-modification system methyltransferase subunit
YP_006022847.1	KEGG: son:SO_A0051 hypothetical protein
YP_006022848.1	KEGG: son:SO_A0051 hypothetical protein
YP_006022849.1	KEGG: ppr:PBPRC0022 DNA helicase TraI; TIGRFAM: Conjugative transfer relaxase protein TraI; Conjugative relaxase region, N-terminal; PFAM: TrwC relaxase
YP_006022851.1	KEGG: ppr:PBPRC0019 conjugative transfer protein TraD; TIGRFAM: Type IV conjugative transfer system coupling protein TraD; PFAM: Type IV secretion-system, TraD, DNA-binding domain
YP_006022852.1	PFAM: Excalibur calcium-binding domain; KEGG: pha:PSHAa1600 cold shock DNA-binding domain-containing protein
YP_006022854.1	PFAM: TraG-like, N-terminal; KEGG: ppr:PBPRC0016 putative sex pilus assembly and mating pair TraG
YP_006022855.1	PFAM: Type IV conjugative transfer system protein TraH; KEGG: vvu:VV2_0648 hypothetical protein
YP_006022857.1	TIGRFAM: Type-F conjugative transfer system pilin assembly thiol-disulphide isomerase TrbB; KEGG: ppr:PBPRC0015 putative thiol-disulfide isomerase
YP_006022859.1	TIGRFAM: Type-F conjugative transfer system pilin assembly protein TraF; KEGG: ppr:PBPRC0014 sex pilus assembly and synthesis protein TraF
YP_006022860.1	TIGRFAM: Type-F conjugative transfer system mating-pair stabilisation protein TraN; KEGG: ppr:PBPRC0013 conjugal transfer mating pair stabilization protein TraN
YP_006022861.1	KEGG: ppr:PBPRC0012 conjugative transfer protein TrbC; TIGRFAM: Type-F conjugative transfer system pilin assembly protein TrbC, subgroup; PFAM: Type-F conjugative transfer system pilin assembly protein TrbC
YP_006022862.1	PFAM: TraU; KEGG: ppr:PBPRC0011 putative sex pilus assembly and synthesis protein TraU
YP_006022863.1	TIGRFAM: Type-F conjugative transfer system protein TraW; KEGG: ppr:PBPRC0010 sex pilus assembly and synthesis protein TraW
YP_006022864.1	PFAM: Type-F conjugative transfer system protein TrbI; KEGG: stm:PSLT089 conjugal transfer protein TrbI
YP_006022865.1	TIGRFAM: Type-IV secretion system protein TraC; KEGG: ppr:PBPRC0008 putative sex pilus assembly and synthesis protein TraC
YP_006022866.1	KEGG: ppr:PBPRC0007 hypothetical protein; TIGRFAM: Type IV secretion system, TraV; PFAM: Type IV secretion system, TraV
YP_006022867.1	KEGG: ppr:PBPRC0006 putative sex pilus assembly and synthesis protein TraB
YP_006022868.1	TIGRFAM: Type-F conjugative transfer system secretin TraK; KEGG: ppr:PBPRC0005 hypothetical protein
YP_006022869.1	KEGG: vsa:VSAL_p840_04 conjugative transfer protein TraE; TIGRFAM: TraE; PFAM: TraE
YP_006022870.1	KEGG: vvy:VVP05 putative conjugative transfer protein TraL; TIGRFAM: Type IV conjugative transfer system protein TraL; PFAM: Type IV conjugative transfer system protein TraL, proteobacteria
YP_006022871.1	KEGG: vsa:VSAL_p840_02 conjugative transfer protein TraA, putative fimbrial protein precursor
YP_006022872.1	PFAM: TraY
YP_006022874.1	KEGG: vfi:VF_B0018 DNA-binding protein RdgA; PFAM: Helix-turn-helix type 3; Peptidase S24/S26A/S26B, conserved region; SMART: Helix-turn-helix type 3
YP_006022875.1	KEGG: son:SO_A0058 hypothetical protein
YP_006022876.1	PFAM: Hok/gef cell toxic protein
YP_006022877.1	KEGG: neu:NE2574 QacE-like protein; integron orf
YP_006022880.1	KEGG: cch:Cag_0719 hypothetical protein
YP_006022882.1	PFAM: Resolvase, N-terminal; KEGG: vfi:VF_B0015 resolvease/recombinase
YP_006022883.1	KEGG: dps:DP1171 hypothetical protein
YP_006022884.1	KEGG: psm:PSM_A2030 hypothetical protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core
YP_006022885.1	KEGG: svo:SVI_3798 hypothetical protein
YP_006022886.1	KEGG: xom:XOO_1597 hypothetical protein
YP_006022887.1	KEGG: swd:Swoo_0901 hypothetical protein
YP_006022888.1	KEGG: ttu:TERTU_0534 hypothetical protein
YP_006022889.1	KEGG: ppr:PBPRC0031 hypothetical protein