-- dump date 20140620_062914 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 399741000001 SEQ_END SEQ_END NC_009829.1 46804 46804 DR NC_009829.1; contig end 46804..46804 Serratia proteamaculans 568 399741000002 SEQ_END SEQ_END NC_009832.1 5448853 5448853 DR NC_009832.1; contig end 5448853..5448853 Serratia proteamaculans 568 YP_001471678.1 CDS Spro_4910 NC_009829.1 15 1004 R PFAM: late control D family protein; KEGG: drm:Dred_1216 phage late control D family protein; late control D family protein complement(15..1004) Serratia proteamaculans 568 5602416 YP_001471679.1 CDS Spro_4911 NC_009829.1 1209 3653 R TIGRFAM: phage tail tape measure protein, TP901 family; KEGG: syc:syc0782_c putative bacteriophage protein; TP901 family phage tail tape measure protein complement(1209..3653) Serratia proteamaculans 568 5602448 YP_001471680.1 CDS Spro_4912 NC_009829.1 3821 4096 R KEGG: drm:Dred_1214 hypothetical protein; hypothetical protein complement(3821..4096) Serratia proteamaculans 568 5602423 YP_001471681.1 CDS Spro_4913 NC_009829.1 4110 4631 R PFAM: major tail tube protein; KEGG: drm:Dred_1213 phage major tail tube protein; major tail tube protein complement(4110..4631) Serratia proteamaculans 568 5602414 YP_001471682.1 CDS Spro_4914 NC_009829.1 4642 6102 R KEGG: drm:Dred_1212 hypothetical protein; hypothetical protein complement(4642..6102) Serratia proteamaculans 568 5602425 YP_001471683.1 CDS Spro_4915 NC_009829.1 6425 6901 R KEGG: drm:Dred_1210 hypothetical protein; hypothetical protein complement(6425..6901) Serratia proteamaculans 568 5602424 YP_001471684.1 CDS Spro_4916 NC_009829.1 6898 7242 R KEGG: dsy:DSY2180 hypothetical protein; hypothetical protein complement(6898..7242) Serratia proteamaculans 568 5602450 YP_001471685.1 CDS Spro_4917 NC_009829.1 7252 7812 R KEGG: spu:585658 hypothetical LOC585658; hypothetical protein complement(7252..7812) Serratia proteamaculans 568 5602406 YP_001471686.1 CDS Spro_4918 NC_009829.1 7813 8859 R PFAM: major capsid protein E; KEGG: drm:Dred_1207 hypothetical protein; major capsid protein E complement(7813..8859) Serratia proteamaculans 568 5602453 YP_001471687.1 CDS Spro_4919 NC_009829.1 8877 9257 R hypothetical protein complement(8877..9257) Serratia proteamaculans 568 5602422 YP_001471688.1 CDS Spro_4920 NC_009829.1 9268 10365 R PFAM: peptidase S14 ClpP; KEGG: bam:Bamb_1874 peptidase S14, ClpP; peptidase S14 ClpP complement(9268..10365) Serratia proteamaculans 568 5602408 YP_001471689.1 CDS Spro_4921 NC_009829.1 10367 11941 R TIGRFAM: phage portal protein, lambda family; PFAM: portal protein lambda; KEGG: drm:Dred_1204 phage portal protein, lambda family; lambda family phage portal protein complement(10367..11941) Serratia proteamaculans 568 5602430 YP_001471690.1 CDS Spro_4922 NC_009829.1 12199 14049 R PFAM: terminase GpA; KEGG: drm:Dred_1203 phage terminase GpA; terminase GpA complement(12199..14049) Serratia proteamaculans 568 5602451 YP_001471691.1 CDS Spro_4923 NC_009829.1 14052 14597 R KEGG: mgm:Mmc1_2754 hypothetical protein; hypothetical protein complement(14052..14597) Serratia proteamaculans 568 5602409 YP_001471692.1 CDS Spro_4924 NC_009829.1 14609 15199 R PFAM: ParB domain protein nuclease; KEGG: pde:Pden_2068 ParB domain protein nuclease; nuclease complement(14609..15199) Serratia proteamaculans 568 5602428 YP_001471693.1 CDS Spro_4925 NC_009829.1 15862 16578 R KEGG: xfa:XF0515 hypothetical protein; hypothetical protein complement(15862..16578) Serratia proteamaculans 568 5602420 YP_001471694.1 CDS Spro_4926 NC_009829.1 16621 18000 R PFAM: ParB domain protein nuclease; nuclease complement(16621..18000) Serratia proteamaculans 568 5602412 YP_001471695.1 CDS Spro_4927 NC_009829.1 17997 18608 R PFAM: ParB domain protein nuclease; KEGG: ecv:APECO1_517 putative transcriptional regulator; nuclease complement(17997..18608) Serratia proteamaculans 568 5602427 YP_001471696.1 CDS Spro_4928 NC_009829.1 20298 20852 R KEGG: ent:Ent638_0796 hypothetical protein; hypothetical protein complement(20298..20852) Serratia proteamaculans 568 5602429 YP_001471697.1 CDS Spro_4929 NC_009829.1 20849 21313 R KEGG: eci:UTI89_C0932 putative endolysin; hypothetical protein complement(20849..21313) Serratia proteamaculans 568 5602417 YP_001471698.1 CDS Spro_4930 NC_009829.1 21508 21891 R KEGG: rso:RSc1933 probable phage-related transmembrane protein; putative phage-related transmembrane protein complement(21508..21891) Serratia proteamaculans 568 5602419 YP_001471699.1 CDS Spro_4931 NC_009829.1 22141 23202 R KEGG: ypi:YpsIP31758_2212 hypothetical protein; prophage antirepressor-like protein complement(22141..23202) Serratia proteamaculans 568 5602434 YP_001471700.1 CDS Spro_4932 NC_009829.1 23616 23996 R KEGG: yps:YPTB1765 putative GP46 [bacteriophage N15] pir||T13133 protein GP46-...; putative GP46 complement(23616..23996) Serratia proteamaculans 568 5602410 YP_001471701.1 CDS Spro_4933 NC_009829.1 24285 25277 R PFAM: protein of unknown function DUF551; hypothetical protein complement(24285..25277) Serratia proteamaculans 568 5602452 YP_001471702.1 CDS Spro_4934 NC_009829.1 25316 25576 R KEGG: ecs:ECs1950 hypothetical protein; hypothetical protein complement(25316..25576) Serratia proteamaculans 568 5602431 YP_001471703.1 CDS Spro_4935 NC_009829.1 25804 26358 R hypothetical protein complement(25804..26358) Serratia proteamaculans 568 5602426 YP_001471704.1 CDS Spro_4936 NC_009829.1 26468 26746 R KEGG: pca:Pcar_0531 hypothetical protein; hypothetical protein complement(26468..26746) Serratia proteamaculans 568 5602441 YP_001471705.1 CDS Spro_4937 NC_009829.1 26779 27207 R PFAM: HNH endonuclease; KEGG: stm:PSLT094.1N hypothetical protein; HNH endonuclease complement(26779..27207) Serratia proteamaculans 568 5602439 YP_001471706.1 CDS Spro_4938 NC_009829.1 27200 27568 R PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: eci:UTI89_C5088 hypothetical protein; HNH endonuclease complement(27200..27568) Serratia proteamaculans 568 5602444 YP_001471707.1 CDS Spro_4939 NC_009829.1 27561 28067 R KEGG: stt:t1914 putative methyltransferase; putative methyltransferase complement(27561..28067) Serratia proteamaculans 568 5602456 YP_001471708.1 CDS Spro_4940 NC_009829.1 28067 28588 R KEGG: ana:all7370 hypothetical protein; hypothetical protein complement(28067..28588) Serratia proteamaculans 568 5602437 YP_001471709.1 CDS Spro_4941 NC_009829.1 28727 29533 R hypothetical protein complement(28727..29533) Serratia proteamaculans 568 5602413 YP_001471710.1 CDS Spro_4942 NC_009829.1 30647 30964 R KEGG: asa:ASA_P4G021 hypothetical protein; hypothetical protein complement(30647..30964) Serratia proteamaculans 568 5602442 YP_001471711.1 CDS Spro_4943 NC_009829.1 30985 31398 R hypothetical protein complement(30985..31398) Serratia proteamaculans 568 5602445 YP_001471712.1 CDS Spro_4944 NC_009829.1 31925 32323 R hypothetical protein complement(31925..32323) Serratia proteamaculans 568 5602435 YP_001471713.1 CDS Spro_4945 NC_009829.1 32326 32652 R PFAM: protein of unknown function DUF1064; KEGG: amt:Amet_2598 protein of unknown function DUF1064; hypothetical protein complement(32326..32652) Serratia proteamaculans 568 5602421 YP_001471714.1 CDS Spro_4946 NC_009829.1 33283 33717 R hypothetical protein complement(33283..33717) Serratia proteamaculans 568 5602432 YP_001471715.1 CDS Spro_4947 NC_009829.1 35620 36264 D KEGG: ypm:YP_pCRY27 ATPase involved in chromosome partitioning; ATPase involved in chromosome partitioning 35620..36264 Serratia proteamaculans 568 5602436 YP_001471716.1 CDS Spro_4948 NC_009829.1 37142 37366 R KEGG: ecs:ECs1505 hypothetical protein; hypothetical protein complement(37142..37366) Serratia proteamaculans 568 5602455 YP_001471717.1 CDS Spro_4949 NC_009829.1 37460 37825 R PFAM: helix-turn-helix domain protein; KEGG: pfl:PFL_5188 helix-turn-helix domain protein, putative; helix-turn-helix domain-containing protein complement(37460..37825) Serratia proteamaculans 568 5602449 YP_001471718.1 CDS Spro_4950 NC_009829.1 37825 38127 R KEGG: bbr:BB3160 hypothetical protein; hypothetical protein complement(37825..38127) Serratia proteamaculans 568 5602446 YP_001471719.1 CDS Spro_4951 NC_009829.1 38505 38771 R KEGG: sec:SC2625 putative bacteriophage protein; putative bacteriophage protein complement(38505..38771) Serratia proteamaculans 568 5602418 YP_001471720.1 CDS Spro_4952 NC_009829.1 38808 39086 R KEGG: reu:Reut_D6449 hypothetical protein; hypothetical protein complement(38808..39086) Serratia proteamaculans 568 5602411 YP_001471721.1 CDS Spro_4953 NC_009829.1 39729 40586 R PFAM: replication initiation protein; KEGG: sgl:SGP1_0012 replication associated protein RepA1; replication initiation protein complement(39729..40586) Serratia proteamaculans 568 5602443 YP_001471722.1 CDS Spro_4954 NC_009829.1 41333 41845 R PFAM: tail assembly chaperone gp38; KEGG: spt:SPA2605 putative phage gene; tail assembly chaperone gp38 complement(41333..41845) Serratia proteamaculans 568 5602447 YP_001471723.1 CDS Spro_4955 NC_009829.1 41849 43699 R KEGG: bte:BTH_II1333 phage-related tail fiber protein; hypothetical protein complement(41849..43699) Serratia proteamaculans 568 5602407 YP_001471724.1 CDS Spro_4956 NC_009829.1 43714 44190 R TIGRFAM: phage tail protein I; PFAM: tail protein I; KEGG: xft:PD1096 phage-related tail protein; phage tail protein I complement(43714..44190) Serratia proteamaculans 568 5602438 YP_001471725.1 CDS Spro_4957 NC_009829.1 44291 45409 R PFAM: Baseplate J family protein; KEGG: drm:Dred_1220 baseplate J family protein; baseplate J family protein complement(44291..45409) Serratia proteamaculans 568 5602415 YP_001471726.1 CDS Spro_4958 NC_009829.1 45406 45720 R hypothetical protein complement(45406..45720) Serratia proteamaculans 568 5602454 YP_001471727.1 CDS Spro_4959 NC_009829.1 45713 46174 R KEGG: drm:Dred_1218 hypothetical protein; hypothetical protein complement(45713..46174) Serratia proteamaculans 568 5602440 YP_001471728.1 CDS Spro_4960 NC_009829.1 46186 46704 R TIGRFAM: phage baseplate assembly protein V; KEGG: plu:plu3426 hypothetical protein; phage baseplate assembly protein V complement(46186..46704) Serratia proteamaculans 568 5602433 YP_001476239.1 CDS Spro_0001 NC_009832.1 565 948 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit I associates with the membrane and may be involved with cation translocation; F0F1 ATP synthase subunit I 565..948 Serratia proteamaculans 568 5607459 YP_001476240.1 CDS Spro_0002 NC_009832.1 969 1790 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 969..1790 Serratia proteamaculans 568 5604877 YP_001476241.1 CDS Spro_0003 NC_009832.1 1840 2079 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 1840..2079 Serratia proteamaculans 568 5604878 YP_001476242.1 CDS Spro_0004 NC_009832.1 2137 2607 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B 2137..2607 Serratia proteamaculans 568 5604879 YP_001476243.1 CDS Spro_0005 NC_009832.1 2622 3155 D Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta 2622..3155 Serratia proteamaculans 568 5604948 YP_001476244.1 CDS Spro_0006 NC_009832.1 3168 4709 D produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 3168..4709 Serratia proteamaculans 568 5603364 YP_001476245.1 CDS Spro_0007 NC_009832.1 4768 5631 D Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 4768..5631 Serratia proteamaculans 568 5603365 YP_001476246.1 CDS Spro_0008 NC_009832.1 5664 7046 D Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 5664..7046 Serratia proteamaculans 568 5603366 YP_001476247.1 CDS atpC NC_009832.1 7067 7486 D part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon 7067..7486 Serratia proteamaculans 568 5603367 YP_001476248.1 CDS glmU NC_009832.1 7783 9153 D forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 7783..9153 Serratia proteamaculans 568 5603655 YP_001476249.1 CDS Spro_0011 NC_009832.1 9365 11194 D Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 9365..11194 Serratia proteamaculans 568 5603656 YP_001476250.1 CDS Spro_0012 NC_009832.1 11524 12564 D TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: yen:YE4201 putative phosphate-binding periplasmic protein; phosphate ABC transporter periplasmic substrate-binding protein PstS 11524..12564 Serratia proteamaculans 568 5603657 YP_001476251.1 CDS pstC NC_009832.1 12657 13613 D part of the ATP-dependent phosphate uptake system PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions; phosphate transporter permease PstC 12657..13613 Serratia proteamaculans 568 5607086 YP_001476252.1 CDS pstA NC_009832.1 13624 14505 D Part of the ABC transporter complex PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions; phosphate transporter permease PtsA 13624..14505 Serratia proteamaculans 568 5607087 YP_001476253.1 CDS pstB NC_009832.1 14554 15330 D ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein 14554..15330 Serratia proteamaculans 568 5607088 YP_001476254.1 CDS Spro_0016 NC_009832.1 15342 16076 D regulates several genes involved in high affinity phosphate uptake; under conditions of high phosphate concentrations downregulates the PHO regulon; transcriptional regulator PhoU 15342..16076 Serratia proteamaculans 568 5607089 YP_001476255.1 CDS Spro_0017 NC_009832.1 16245 17084 D PFAM: extracellular solute-binding protein family 3; KEGG: yen:YE4193 putative periplasmic solute-binding protein; extracellular solute-binding protein 16245..17084 Serratia proteamaculans 568 5604076 YP_001476256.1 CDS Spro_0018 NC_009832.1 17162 17875 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yen:YE4191 ABC transporter permease; polar amino acid ABC transporter inner membrane subunit 17162..17875 Serratia proteamaculans 568 5604077 YP_001476257.1 CDS Spro_0019 NC_009832.1 17877 18617 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yen:YE4190 putative amino acid transport system permease; polar amino acid ABC transporter inner membrane subunit 17877..18617 Serratia proteamaculans 568 5604078 YP_001476258.1 CDS Spro_0020 NC_009832.1 18610 19275 R YieH; catalyzes the dephosphorylation of phosphoenolpyruvate, AMP and p-nitrophenyl phosphate; purine and pyrimidine nucleotides are secondary substrates; member of the haloacid dehalogenase-like hydrolases superfamily; 6-phosphogluconate phosphatase complement(18610..19275) Serratia proteamaculans 568 5606862 YP_001476259.1 CDS Spro_0021 NC_009832.1 19501 20838 D PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: yps:YPTB3953 xanthine/uracil permease family protein; xanthine/uracil/vitamin C permease 19501..20838 Serratia proteamaculans 568 5606863 YP_001476260.1 CDS Spro_0022 NC_009832.1 21100 22152 R KEGG: pfl:PFL_5500 hypothetical protein; hypothetical protein complement(21100..22152) Serratia proteamaculans 568 5606864 YP_001476261.1 CDS Spro_0023 NC_009832.1 22248 22814 R PFAM: NADPH-dependent FMN reductase; KEGG: yen:YE4184 putative NAD(P)H-dependent FMN reductase; NADPH-dependent FMN reductase complement(22248..22814) Serratia proteamaculans 568 5606865 YP_001476262.1 CDS Spro_0024 NC_009832.1 22989 23714 R KEGG: eca:ECA4463 hypothetical protein; hypothetical protein complement(22989..23714) Serratia proteamaculans 568 5606841 YP_001476263.1 CDS Spro_0025 NC_009832.1 23811 25124 R KEGG: sbo:SBO_4340 lysine:N6-hydroxylase; L-lysine 6-monooxygenase (NADPH) complement(23811..25124) Serratia proteamaculans 568 5606842 YP_001476264.1 CDS Spro_0026 NC_009832.1 25247 26047 R PFAM: beta-lactamase domain protein; KEGG: sec:SC2881 putative metal-dependent hydrolase of the beta-lactamase superfamily II; beta-lactamase domain-containing protein complement(25247..26047) Serratia proteamaculans 568 5606843 YP_001476265.1 CDS trmE NC_009832.1 26077 27441 R in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE complement(26077..27441) Serratia proteamaculans 568 5606326 YP_001476266.1 CDS Spro_0028 NC_009832.1 27544 29181 R functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; putative inner membrane protein translocase component YidC complement(27544..29181) Serratia proteamaculans 568 5606327 YP_001476267.1 CDS Spro_0029 NC_009832.1 29184 29441 R PFAM: protein of unknown function DUF37; KEGG: yps:YPTB3947 hypothetical protein; hypothetical protein complement(29184..29441) Serratia proteamaculans 568 5606328 YP_001476268.1 CDS rnpA NC_009832.1 29405 29764 R protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P complement(29405..29764) Serratia proteamaculans 568 5606329 YP_001476269.1 CDS rpmH NC_009832.1 29783 29923 R in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 complement(29783..29923) Serratia proteamaculans 568 5607342 YP_001476270.1 CDS dnaA NC_009832.1 30606 31997 D binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 30606..31997 Serratia proteamaculans 568 5607343 YP_001476271.1 CDS Spro_0033 NC_009832.1 32002 33102 D binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 32002..33102 Serratia proteamaculans 568 5607344 YP_001476272.1 CDS recF NC_009832.1 33271 34356 D Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F 33271..34356 Serratia proteamaculans 568 5603525 YP_001476273.1 CDS gyrB NC_009832.1 34375 36789 D negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 34375..36789 Serratia proteamaculans 568 5603526 YP_001476274.1 CDS Spro_0036 NC_009832.1 36913 37728 D YidA; catalyzes the dephosphorylation of erythrose 4-phosphate (preferred substrate), mannose 1-phosphate and p-nitrophenyl phosphate; hydrolyzes the alpha-D-glucose-1-phosphate but not the beta form; member of the haloacid dehalogenase-like hydrolases superfamily and Cof family of proteins; sugar phosphatase 36913..37728 Serratia proteamaculans 568 5603527 YP_001476275.1 CDS Spro_0037 NC_009832.1 37845 38813 R PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: yen:YE4167 pyridoxal-phosphate dependent enzyme; hypothetical protein complement(37845..38813) Serratia proteamaculans 568 5603528 YP_001476276.1 CDS Spro_0038 NC_009832.1 38810 39415 R PFAM: YheO domain protein; KEGG: bvi:Bcep1808_0785 transcriptional regulator, fis family; YheO domain-containing protein complement(38810..39415) Serratia proteamaculans 568 5607325 YP_001476277.1 CDS Spro_0039 NC_009832.1 39690 41006 D PFAM: major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_3541 major facilitator superfamily MFS_1; major facilitator transporter 39690..41006 Serratia proteamaculans 568 5607326 YP_001476278.1 CDS Spro_0040 NC_009832.1 40999 41946 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: pol:Bpro_3531 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 40999..41946 Serratia proteamaculans 568 5607327 YP_001476279.1 CDS Spro_0041 NC_009832.1 42130 42888 D PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: eca:ECA4419 galactonate operon transcriptional repressor; GntR domain-containing protein 42130..42888 Serratia proteamaculans 568 5607209 YP_001476280.1 CDS Spro_0042 NC_009832.1 42885 43778 D PFAM: 2-keto-3-deoxy-galactonokinase; KEGG: eca:ECA4418 2-dehydro-3-deoxygalactonokinase; 2-dehydro-3-deoxygalactonokinase 42885..43778 Serratia proteamaculans 568 5607210 YP_001476281.1 CDS Spro_0043 NC_009832.1 43762 44379 D catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate; functions in galactonate metabolism; 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 43762..44379 Serratia proteamaculans 568 5607211 YP_001476282.1 CDS Spro_0044 NC_009832.1 44376 45524 D PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: eca:ECA4416 DgoA protein [includes: 2-dehydro-3-deoxyphosphogalactonate aldolase; galactonate dehydratase]; galactonate dehydratase 44376..45524 Serratia proteamaculans 568 5607212 YP_001476283.1 CDS Spro_0045 NC_009832.1 45743 47035 D TIGRFAM: phosphoglycerate transporter; d-galactonate transporter; PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA4415 putative D-galactonate transporter; d-galactonate transporter 45743..47035 Serratia proteamaculans 568 5607319 YP_001476284.1 CDS Spro_0046 NC_009832.1 47082 48362 D KEGG: yen:YE4166 hypothetical protein; hypothetical protein 47082..48362 Serratia proteamaculans 568 5607320 YP_001476285.1 CDS Spro_0047 NC_009832.1 48397 48741 R PFAM: protein of unknown function DUF1375; KEGG: eca:ECA4404 putative lipoprotein; hypothetical protein complement(48397..48741) Serratia proteamaculans 568 5607321 YP_001476286.1 CDS Spro_0048 NC_009832.1 49046 49459 D with IbpB associates with aggregated proteins to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress; heat shock protein IbpA 49046..49459 Serratia proteamaculans 568 5606858 YP_001476287.1 CDS Spro_0049 NC_009832.1 49568 49996 D 16 kDa heat shock protein B; associates with aggregated proteins, together with ibpA, to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress; ATP-independent; heat shock chaperone IbpB 49568..49996 Serratia proteamaculans 568 5606859 YP_001476288.1 CDS Spro_0050 NC_009832.1 50164 51822 D TIGRFAM: YidE/YbjL duplication; PFAM: TrkA-C domain protein; YidE/YbjL duplication domain protein; KEGG: ypp:YPDSF_0014 membrane protein; hypothetical protein 50164..51822 Serratia proteamaculans 568 5606860 YP_001476289.1 CDS Spro_0051 NC_009832.1 51859 52239 R PFAM: PilT protein domain protein; KEGG: ret:RHE_PF00555 hypothetical protein; PilT domain-containing protein complement(51859..52239) Serratia proteamaculans 568 5606861 YP_001476290.1 CDS Spro_0052 NC_009832.1 52239 52448 R KEGG: ecs:ECs4816 hypothetical protein; hypothetical protein complement(52239..52448) Serratia proteamaculans 568 5607289 YP_001476291.1 CDS avtA NC_009832.1 52549 53871 R transaminase C; catalyzes transamination of alanine, valine, and 2-aminobutyrate with their respective 2-keto acids; also catalyzes terminal step in valine biosynthesis; valine--pyruvate transaminase complement(52549..53871) Serratia proteamaculans 568 5607290 YP_001476292.1 CDS malS NC_009832.1 53931 55997 R periplasmic enzyme that degrades maltodextrins that enter via the outer membrane porin LamB; hydrolyzes alpha-(1,4) glycosidic linkages; contains internal disulfide bonds; periplasmic alpha-amylase complement(53931..55997) Serratia proteamaculans 568 5607291 YP_001476293.1 CDS Spro_0055 NC_009832.1 56186 56434 D PFAM: CopG domain protein DNA-binding domain protein; KEGG: eca:ECA2757 hypothetical protein; CopG family transcriptional regulator 56186..56434 Serratia proteamaculans 568 5604822 YP_001476294.1 CDS Spro_0056 NC_009832.1 56424 56711 D PFAM: plasmid stabilization system; KEGG: eca:ECA2758 hypothetical protein; plasmid stabilization system protein 56424..56711 Serratia proteamaculans 568 5604823 YP_001476295.1 CDS Spro_0057 NC_009832.1 56756 57733 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: yen:YE4159 putative D-isomer specific 2-hydroxyacid dehydrogenase; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase complement(56756..57733) Serratia proteamaculans 568 5604824 YP_001476296.1 CDS Spro_0058 NC_009832.1 57838 59106 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: ent:Ent638_0168 major facilitator superfamily MFS_1; major facilitator transporter complement(57838..59106) Serratia proteamaculans 568 5604825 YP_001476297.1 CDS Spro_0059 NC_009832.1 59204 60163 R PFAM: PfkB domain protein; KEGG: kpn:KPN_03913 putative kinase; ribokinase-like domain-containing protein complement(59204..60163) Serratia proteamaculans 568 5603550 YP_001476298.1 CDS Spro_0060 NC_009832.1 60170 60922 R PFAM: Xylose isomerase domain protein TIM barrel; KEGG: kpn:KPN_03912 putative sugar phosphate isomerase/epimerase; xylose isomerase domain-containing protein complement(60170..60922) Serratia proteamaculans 568 5603551 YP_001476299.1 CDS Spro_0061 NC_009832.1 61106 62140 R PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: kpn:KPN_03911 putative transcriptional regulator; LacI family transcription regulator complement(61106..62140) Serratia proteamaculans 568 5603552 YP_001476300.1 CDS Spro_0062 NC_009832.1 62260 62922 R PFAM: OmpA/MotB domain protein; 17 kDa surface antigen; KEGG: yen:YE4156 putative lipoprotein; putative outer membrane lipoprotein complement(62260..62922) Serratia proteamaculans 568 5607270 YP_001476301.1 CDS Spro_0063 NC_009832.1 63191 63649 R PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA0081 putative GNAT-family acetyltransferase; hypothetical protein complement(63191..63649) Serratia proteamaculans 568 5607271 YP_001476302.1 CDS Spro_0064 NC_009832.1 63625 64188 R KEGG: yen:YE4152 DNA-3-methyladenine glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase; DNA-3-methyladenine glycosylase I complement(63625..64188) Serratia proteamaculans 568 5607272 YP_001476303.1 CDS Spro_0065 NC_009832.1 64387 66375 D KEGG: spt:SPA2157 outer membrane esterase; TIGRFAM: outer membrane autotransporter barrel domain; PFAM: lipolytic protein G-D-S-L family; Autotransporter beta- domain protein; outer membrane autotransporter 64387..66375 Serratia proteamaculans 568 5607273 YP_001476304.1 CDS Spro_0066 NC_009832.1 67169 67915 D PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; KEGG: yen:YE1026 LuxR-family transcriptional regulator; LuxR family transcriptional regulator 67169..67915 Serratia proteamaculans 568 5602839 YP_001476305.1 CDS Spro_0067 NC_009832.1 67874 68548 R PFAM: autoinducer synthesis protein; KEGG: eca:ECA0105 N-acylhomoserine lactone synthesis protein; autoinducer synthesis protein complement(67874..68548) Serratia proteamaculans 568 5602840 YP_001476306.1 CDS Spro_0068 NC_009832.1 68897 70240 R PFAM: major facilitator superfamily MFS_1; KEGG: bmb:BruAb1_1939 major facilitator family transporter; major facilitator transporter complement(68897..70240) Serratia proteamaculans 568 5602841 YP_001476307.1 CDS glyQ NC_009832.1 70502 71416 D glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 70502..71416 Serratia proteamaculans 568 5607264 YP_001476308.1 CDS glyS NC_009832.1 71426 73495 D glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta 71426..73495 Serratia proteamaculans 568 5607265 YP_001476309.1 CDS Spro_0071 NC_009832.1 73841 74560 D KEGG: yen:YE4149 hypothetical protein; hypothetical protein 73841..74560 Serratia proteamaculans 568 5607266 YP_001476310.1 CDS Spro_0072 NC_009832.1 75110 77029 D TIGRFAM: PTS system, mannitol-specific IIC subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; phosphotransferase system EIIC; phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: yen:YE4148 PTS system, mannitol-specific IIABC component; PTS system mannitol-specific transporter subunit IIC 75110..77029 Serratia proteamaculans 568 5607267 YP_001476311.1 CDS Spro_0073 NC_009832.1 77088 78239 D PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: yen:YE4147 mannitol-1-phosphate 5-dehydrogenase; mannitol-1-phosphate 5-dehydrogenase 77088..78239 Serratia proteamaculans 568 5606298 YP_001476312.1 CDS mtlR NC_009832.1 78334 78885 D Acts as a repressor of the mtlAD operon; mannitol repressor protein 78334..78885 Serratia proteamaculans 568 5606299 YP_001476313.1 CDS Spro_0075 NC_009832.1 78882 79490 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: yen:YE4145 putative inner membrane protein; lysine exporter protein LysE/YggA complement(78882..79490) Serratia proteamaculans 568 5606300 YP_001476314.1 CDS Spro_0076 NC_009832.1 79630 81096 D PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: yen:YE4144 putative transcriptional regulator; transcriptional regulator 79630..81096 Serratia proteamaculans 568 5606138 YP_001476315.1 CDS Spro_0077 NC_009832.1 81118 81531 D KEGG: yen:YE4143 hypothetical protein; hypothetical protein 81118..81531 Serratia proteamaculans 568 5606139 YP_001476316.1 CDS Spro_0078 NC_009832.1 81566 82345 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: pfo:Pfl_2883 hypothetical protein; type 11 methyltransferase complement(81566..82345) Serratia proteamaculans 568 5606140 YP_001476317.1 CDS Spro_0079 NC_009832.1 82460 83131 R PFAM: 3-alpha domain protein; MOSC domain containing protein; KEGG: yen:YE4140 hypothetical protein; hypothetical protein complement(82460..83131) Serratia proteamaculans 568 5606141 YP_001476318.1 CDS Spro_0080 NC_009832.1 83225 85153 R PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: yen:YE4139 methyl-accepting chemotaxis protein II; methyl-accepting chemotaxis sensory transducer complement(83225..85153) Serratia proteamaculans 568 5603897 YP_001476319.1 CDS Spro_0081 NC_009832.1 85281 85901 R SodA; manganese binding; only present under aerobic conditions; destroys free radicals; superoxide dismutase complement(85281..85901) Serratia proteamaculans 568 5603898 YP_001476320.1 CDS Spro_0082 NC_009832.1 86032 86868 R involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth; formate dehydrogenase accessory protein complement(86032..86868) Serratia proteamaculans 568 5603899 YP_001476321.1 CDS Spro_0083 NC_009832.1 87013 87600 D PFAM: molybdopterin oxidoreductase Fe4S4 region; KEGG: ypi:YpsIP31758_4119 aerobic formate dehydrogenase, alpha subunit, proteobacterial-type; molybdopterin oxidoreductase Fe4S4 region 87013..87600 Serratia proteamaculans 568 5607158 YP_001476322.1 CDS Spro_0084 NC_009832.1 87649 90060 D KEGG: yen:YE4135 formate dehydrogenase-o, major subunit; TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; formate dehydrogenase subunit alpha 87649..90060 Serratia proteamaculans 568 5607159 YP_001476323.1 CDS Spro_0085 NC_009832.1 90073 90972 D TIGRFAM: formate dehydrogenase, beta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Formate dehydrogenase transmembrane domain protein; KEGG: ypi:YpsIP31758_4118 putative aerobic formate dehydrogenase, iron-sulfur subunit; formate dehydrogenase subunit beta 90073..90972 Serratia proteamaculans 568 5607160 YP_001476324.1 CDS Spro_0086 NC_009832.1 90969 91604 D cytochrome b556(FDO) component; heme containing; formate dehydrogenase-O subunit gamma 90969..91604 Serratia proteamaculans 568 5607161 YP_001476325.1 CDS Spro_0087 NC_009832.1 91604 92533 D required for the formation of active formate dehydrogenase; formate dehydrogenase accessory protein FdhE 91604..92533 Serratia proteamaculans 568 5603723 YP_001476326.1 CDS Spro_0088 NC_009832.1 92673 93320 D KEGG: ypi:YpsIP31758_0230 putative lipoprotein; hypothetical protein 92673..93320 Serratia proteamaculans 568 5603724 YP_001476327.1 CDS Spro_0089 NC_009832.1 93355 93960 D PFAM: Glutathione S-transferase domain; KEGG: ent:Ent638_0139 glutathione S-transferase, C-terminal domain; putative glutathione S-transferase 93355..93960 Serratia proteamaculans 568 5603725 YP_001476328.1 CDS Spro_0090 NC_009832.1 94027 95418 D catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis; selenocysteine synthase 94027..95418 Serratia proteamaculans 568 5606985 YP_001476329.1 CDS Spro_0091 NC_009832.1 95415 97262 D TIGRFAM: selenocysteine-specific translation elongation factor; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 2; Elongation factor SelB winged helix 3; KEGG: yen:YE4130 selenocysteinyl-tRNA-specific translation factor; selenocysteinyl-tRNA-specific translation factor 95415..97262 Serratia proteamaculans 568 5606986 YP_001476330.1 CDS Spro_0092 NC_009832.1 97654 98901 R PFAM: major facilitator superfamily MFS_1; KEGG: ypi:YpsIP31758_4110 multidrug translocase MdfA; major facilitator transporter complement(97654..98901) Serratia proteamaculans 568 5606987 YP_001476331.1 CDS Spro_0093 NC_009832.1 99120 100112 D KEGG: yen:YE4126 hypothetical protein; hypothetical protein 99120..100112 Serratia proteamaculans 568 5606988 YP_001476332.1 CDS Spro_0094 NC_009832.1 100107 101030 R PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: yen:YE4125 putative transcriptional regulator; AraC family transcriptional regulator complement(100107..101030) Serratia proteamaculans 568 5606982 YP_001476333.1 CDS Spro_0095 NC_009832.1 101033 101584 R PFAM: isochorismatase hydrolase; KEGG: yen:YE4124 putative member of isochorismatase hydrolase family; isochorismatase hydrolase complement(101033..101584) Serratia proteamaculans 568 5606983 YP_001476334.1 CDS Spro_0096 NC_009832.1 101685 103079 R metallo-dependent hydrolase superfamily; deaminase with metallo-dependent hydrolase domain; putative deaminase complement(101685..103079) Serratia proteamaculans 568 5606984 YP_001476335.1 CDS Spro_0097 NC_009832.1 103226 104677 R TIGRFAM: xylulokinase; PFAM: carbohydrate kinase FGGY; KEGG: yen:YE4123 xylulose kinase; xylulokinase complement(103226..104677) Serratia proteamaculans 568 5605675 YP_001476336.1 CDS Spro_0098 NC_009832.1 104720 106039 R catalyzes the interconversion of D-xylose to D-xylulose; xylose isomerase complement(104720..106039) Serratia proteamaculans 568 5605676 YP_001476337.1 CDS xylF NC_009832.1 106406 107401 D periplasmic substrate-binding component of the ATP-dependent xylose transport system; high affinity; D-xylose transporter subunit XylF 106406..107401 Serratia proteamaculans 568 5605677 YP_001476338.1 CDS Spro_0100 NC_009832.1 107431 108972 D with XylFH is part of the high affinity xylose ABC transporter; xylose transporter ATP-binding subunit 107431..108972 Serratia proteamaculans 568 5605678 YP_001476339.1 CDS Spro_0101 NC_009832.1 108950 110134 D PFAM: inner-membrane translocator; KEGG: yen:YE4119 sugar transport system permease protein; monosaccharide-transporting ATPase 108950..110134 Serratia proteamaculans 568 5604681 YP_001476340.1 CDS Spro_0102 NC_009832.1 110239 111417 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: ypi:YpsIP31758_4098 xylose operon regulatory protein; AraC family transcriptional regulator 110239..111417 Serratia proteamaculans 568 5604682 YP_001476341.1 CDS Spro_0103 NC_009832.1 111485 112105 D PFAM: DNA polymerase beta domain protein region; KEGG: lpp:plpp0094 hypothetical protein; DNA polymerase subunit beta 111485..112105 Serratia proteamaculans 568 5604683 YP_001476342.1 CDS Spro_0104 NC_009832.1 112056 112496 D KEGG: lpp:plpp0093 hypothetical protein; hypothetical protein 112056..112496 Serratia proteamaculans 568 5605484 YP_001476343.1 CDS Spro_0105 NC_009832.1 112502 113356 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pap:PSPA7_2742 probable transcriptional regulator; LysR family transcriptional regulator complement(112502..113356) Serratia proteamaculans 568 5605485 YP_001476344.1 CDS cynX NC_009832.1 113483 114682 D MFS transporter family member induced in the presence of cyanate as part of a 3 gene operon; not essential; putative cyanate transporter 113483..114682 Serratia proteamaculans 568 5605486 YP_001476345.1 CDS Spro_0107 NC_009832.1 114759 116105 D KEGG: yps:YPTB3589 hypothetical protein; hypothetical protein 114759..116105 Serratia proteamaculans 568 5605487 YP_001476346.1 CDS Spro_0108 NC_009832.1 116464 117633 D PFAM: integrase family protein; KEGG: ypp:YPDSF_3775 phage integrase; integrase family protein 116464..117633 Serratia proteamaculans 568 5603187 YP_001476347.1 CDS Spro_0109 NC_009832.1 117630 119648 D KEGG: fps:FP1554 hypothetical protein; hypothetical protein 117630..119648 Serratia proteamaculans 568 5606448 YP_001476348.1 CDS Spro_0110 NC_009832.1 120134 120886 R KEGG: sus:Acid_2422 hypothetical protein; hypothetical protein complement(120134..120886) Serratia proteamaculans 568 5606449 YP_001476349.1 CDS Spro_0111 NC_009832.1 120891 121997 R KEGG: sus:Acid_2423 hypothetical protein; hypothetical protein complement(120891..121997) Serratia proteamaculans 568 5602761 YP_001476350.1 CDS Spro_0112 NC_009832.1 122132 123586 R PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: syf:Synpcc7942_1725 regulatory protein GntR, HTH; transcriptional regulator complement(122132..123586) Serratia proteamaculans 568 5602762 YP_001476351.1 CDS Spro_0113 NC_009832.1 123861 124433 D KEGG: sun:SUN_0924 acetyltransferase, GNAT family; acetyltransferase 123861..124433 Serratia proteamaculans 568 5602763 YP_001476352.1 CDS Spro_0114 NC_009832.1 124594 124917 D KEGG: ecs:ECs4463 hypothetical protein; hypothetical protein 124594..124917 Serratia proteamaculans 568 5602764 YP_001476353.1 CDS Spro_0115 NC_009832.1 124923 126059 D PFAM: secretion protein HlyD family protein; KEGG: ent:Ent638_0138 secretion protein HlyD family protein; secretion protein HlyD family protein 124923..126059 Serratia proteamaculans 568 5606743 YP_001476354.1 CDS Spro_0116 NC_009832.1 126205 126522 D PFAM: regulatory protein LuxR; KEGG: ypi:YpsIP31758_0720 transcriptional regulator, LuxR family; LuxR family transcriptional regulator 126205..126522 Serratia proteamaculans 568 5606744 YP_001476355.1 CDS Spro_0117 NC_009832.1 126588 127175 R KEGG: oan:Oant_1359 hypothetical protein; hypothetical protein complement(126588..127175) Serratia proteamaculans 568 5606745 YP_001476356.1 CDS Spro_0118 NC_009832.1 127320 127556 D KEGG: pat:Patl_3324 hypothetical protein; hypothetical protein 127320..127556 Serratia proteamaculans 568 5603776 YP_001476357.1 CDS Spro_0119 NC_009832.1 127593 128015 R PFAM: histidine triad (HIT) protein; KEGG: har:HEAR2858 conserved hypothetical protein; histidine triad (HIT) protein complement(127593..128015) Serratia proteamaculans 568 5603777 YP_001476358.1 CDS Spro_0120 NC_009832.1 128119 129174 R PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: pol:Bpro_4573 transcriptional regulator, LacI family; LacI family transcription regulator complement(128119..129174) Serratia proteamaculans 568 5603029 YP_001476359.1 CDS Spro_0121 NC_009832.1 129225 129986 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: csa:Csal_1758 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(129225..129986) Serratia proteamaculans 568 5603030 YP_001476360.1 CDS Spro_0122 NC_009832.1 130011 131882 R TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: bte:BTH_II0984 TRAP transporter, DctM subunit subfamily, putative; TRAP dicarboxylate transporter subunit DctM complement(130011..131882) Serratia proteamaculans 568 5603031 YP_001476361.1 CDS Spro_0123 NC_009832.1 131907 132920 R TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: bte:BTH_II0985 bacterial extracellular solute-binding protein, family 7 superfamily; TRAP dicarboxylate transporter subunit DctP complement(131907..132920) Serratia proteamaculans 568 5606631 YP_001476362.1 CDS Spro_0124 NC_009832.1 133243 134691 D KEGG: yen:YE4092 hypothetical protein; hypothetical protein 133243..134691 Serratia proteamaculans 568 5606632 YP_001476363.1 CDS Spro_0125 NC_009832.1 134688 135437 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; KEGG: pfl:PFL_4587 TDP-glucose-4,6-dehydratase-related protein; NAD-dependent epimerase/dehydratase complement(134688..135437) Serratia proteamaculans 568 5606633 YP_001476364.1 CDS Spro_0126 NC_009832.1 135531 136394 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bbt:BBta_7356 putative transcriptional regulator, LysR family; LysR family transcriptional regulator complement(135531..136394) Serratia proteamaculans 568 5605614 YP_001476365.1 CDS Spro_0127 NC_009832.1 136509 137267 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_B2157 putative short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 136509..137267 Serratia proteamaculans 568 5605615 YP_001476366.1 CDS Spro_0128 NC_009832.1 137280 137879 R SMART: metal-dependent phosphohydrolase HD region; KEGG: hch:HCH_02572 guanosine polyphosphate pyrophosphohydrolase/synthetases; metal dependent phosphohydrolase complement(137280..137879) Serratia proteamaculans 568 5605616 YP_001476367.1 CDS Spro_0129 NC_009832.1 137991 138455 D PFAM: regulatory protein MarR; KEGG: sgl:SG0020 transcriptional regulator; MarR family transcriptional regulator 137991..138455 Serratia proteamaculans 568 5602528 YP_001476368.1 CDS Spro_0130 NC_009832.1 138612 139037 D PFAM: OsmC family protein; KEGG: yen:YE4091 putative osmotic/stress related protein; OsmC family protein 138612..139037 Serratia proteamaculans 568 5602529 YP_001476369.1 CDS Spro_0131 NC_009832.1 139262 140956 D catalyzes the addition of a phosphoethanolamine group to the outer Kdo residue of lipopolysaccharide; phosphoethanolamine transferase 139262..140956 Serratia proteamaculans 568 5602530 YP_001476370.1 CDS Spro_0132 NC_009832.1 141077 141667 D PFAM: regulatory protein LuxR; response regulator receiver; KEGG: ypi:YpsIP31758_4080 transcriptional regulatory protein UhpA; two component LuxR family transcriptional regulator 141077..141667 Serratia proteamaculans 568 5606467 YP_001476371.1 CDS Spro_0133 NC_009832.1 141667 143208 D Member of the two-component regulatory system UhpB/UhpA involved in the regulation of the uptake of hexose ph; sensory histidine kinase UhpB 141667..143208 Serratia proteamaculans 568 5606468 YP_001476372.1 CDS Spro_0134 NC_009832.1 143303 144634 D membrane protein regulates uhpT expression; regulatory protein UhpC 143303..144634 Serratia proteamaculans 568 5606469 YP_001476373.1 CDS Spro_0135 NC_009832.1 145151 145483 R KEGG: gur:Gura_0613 hypothetical protein; hypothetical protein complement(145151..145483) Serratia proteamaculans 568 5606450 YP_001476374.1 CDS Spro_0136 NC_009832.1 145495 145791 R KEGG: gme:Gmet_2969 hypothetical protein; hypothetical protein complement(145495..145791) Serratia proteamaculans 568 5606407 YP_001476375.1 CDS Spro_0137 NC_009832.1 146170 147861 D KEGG: sbl:Sbal_3083 chitinase; PFAM: glycoside hydrolase family 18; Chitinase A domain protein; SMART: PKD domain containing protein; chitinase II; chitinase 146170..147861 Serratia proteamaculans 568 5606408 YP_001476376.1 CDS Spro_0138 NC_009832.1 148465 150072 D PFAM: extracellular solute-binding protein family 5; KEGG: yen:YE4083 periplasmic dipeptide transport protein; extracellular solute-binding protein 148465..150072 Serratia proteamaculans 568 5606342 YP_001476377.1 CDS Spro_0139 NC_009832.1 150179 151234 D transports peptides consisting of two or three amino acids; dipeptide transporter permease DppB 150179..151234 Serratia proteamaculans 568 5606343 YP_001476378.1 CDS Spro_0140 NC_009832.1 151246 152148 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yen:YE4081 dipeptide transport system permease protein; dipeptide transporter 151246..152148 Serratia proteamaculans 568 5606344 YP_001476379.1 CDS dppD NC_009832.1 152163 153143 D DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF; dipeptide transporter ATP-binding subunit 152163..153143 Serratia proteamaculans 568 5605949 YP_001476380.1 CDS dppF NC_009832.1 153140 154129 D Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides; dipeptide transporter ATP-binding subunit 153140..154129 Serratia proteamaculans 568 5605950 YP_001476381.1 CDS Spro_0143 NC_009832.1 154409 156061 R KEGG: yen:YE4078 putative inner membrane protein possibly involved in cellulose synthesis; hypothetical protein complement(154409..156061) Serratia proteamaculans 568 5605951 YP_001476382.1 CDS Spro_0144 NC_009832.1 156045 156257 R KEGG: eca:ECA4365 hypothetical protein; hypothetical protein complement(156045..156257) Serratia proteamaculans 568 5602956 YP_001476383.1 CDS Spro_0145 NC_009832.1 156247 157815 R KEGG: yen:YE4077 hypothetical protein; hypothetical protein complement(156247..157815) Serratia proteamaculans 568 5602957 YP_001476384.1 CDS Spro_0146 NC_009832.1 158014 158205 D KEGG: yen:YE4076 hypothetical protein; hypothetical protein 158014..158205 Serratia proteamaculans 568 5602958 YP_001476385.1 CDS Spro_0147 NC_009832.1 158209 158946 D PFAM: YhjQ family protein; KEGG: yen:YE4075 hypothetical protein; YhjQ family protein 158209..158946 Serratia proteamaculans 568 5606261 YP_001476386.1 CDS bcsA NC_009832.1 158943 161546 D polymerizes uridine 5'-diphosphate glucose to cellulose; acts with BcsB, BcsZ and BcsC in cellulose biosynthesis; cellulose synthase catalytic subunit 158943..161546 Serratia proteamaculans 568 5606262 YP_001476387.1 CDS Spro_0149 NC_009832.1 161602 163911 D binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); cellulose synthase regulator protein 161602..163911 Serratia proteamaculans 568 5606263 YP_001476388.1 CDS Spro_0150 NC_009832.1 163917 165029 D catalyzes the hydrolysis of 1,4-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans; endo-1,4-D-glucanase 163917..165029 Serratia proteamaculans 568 5604991 YP_001476389.1 CDS Spro_0151 NC_009832.1 165011 168484 D cellulose is produced by the multicellular morphotypes of E. coli and Salmonella typhimurium; the cellulose biosynthesis genes bcsA, bcsB, bcsZ and bcsC are constitutively transcribed, however, cellulose synthesis is dependent on the expression of adrA; cellulose synthase subunit BcsC 165011..168484 Serratia proteamaculans 568 5604992 YP_001476390.1 CDS Spro_0152 NC_009832.1 168775 170781 D HmsP in Yersinia pestis plays a role in invasion of epithelial cells; the EAL-domain portion of HmsP from Y. pestis shows phosphodiesterase activity which is required for the inhibition of biofilm formation; inner membrane protein; similar to a putative phosphodiesterase protein from E. coli; putative phosphodiesterase 168775..170781 Serratia proteamaculans 568 5604993 YP_001476391.1 CDS Spro_0153 NC_009832.1 171075 172364 D involved in the transport of C4-dicarboxylates across the membrane; C4-dicarboxylate transporter DctA 171075..172364 Serratia proteamaculans 568 5605098 YP_001476392.1 CDS Spro_0154 NC_009832.1 172647 174140 D PFAM: peptidase M16 domain protein; KEGG: yen:YE4066 putative insulinase family protease; peptidase M16 domain-containing protein 172647..174140 Serratia proteamaculans 568 5605099 YP_001476393.1 CDS Spro_0155 NC_009832.1 174168 174503 R PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: kpn:KPN_04275 peptidyl-prolyl cis-trans isomerase C (rotamase C); PpiC-type peptidyl-prolyl cis-trans isomerase complement(174168..174503) Serratia proteamaculans 568 5605154 YP_001476394.1 CDS Spro_0156 NC_009832.1 174559 176583 D single-stranded DNA-dependent ATPase; initiates unwinding at a nick in the DNA; involved in DNA replication; ATP-dependent DNA helicase Rep 174559..176583 Serratia proteamaculans 568 5605155 YP_001476395.1 CDS Spro_0157 NC_009832.1 176766 178262 R catalyzes the conversion of guanosine 5'-triphosphate,3'-diphosphate (pppGpp) to guanosine 5'-diphosphate,3'-diphosphate (ppGpp); pppGpp and ppGpp control the stringent response during amino acid starvation; guanosine pentaphosphate phosphohydrolase complement(176766..178262) Serratia proteamaculans 568 5605156 YP_001476396.1 CDS Spro_0158 NC_009832.1 178269 179555 R enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation; ATP-dependent RNA helicase RhlB complement(178269..179555) Serratia proteamaculans 568 5605160 YP_001476397.1 CDS Spro_0159 NC_009832.1 179673 179999 D TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: sdy:SDY_3968 thioredoxin 1; thioredoxin 179673..179999 Serratia proteamaculans 568 5605161 YP_001476398.1 CDS rho NC_009832.1 180578 181837 D An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 180578..181837 Serratia proteamaculans 568 5605162 YP_001476399.1 CDS Spro_0161 NC_009832.1 182166 183248 D TIGRFAM: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase; PFAM: glycosyl transferase family 4; KEGG: ypi:YpsIP31758_0182 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 182166..183248 Serratia proteamaculans 568 5605187 YP_001476400.1 CDS Spro_0162 NC_009832.1 183269 184321 D Enterobacterial Common Antigen (ECA) polysaccharide chain length modulation protein; lipopolysaccharide biosynthesis protein WzzE 183269..184321 Serratia proteamaculans 568 5605188 YP_001476401.1 CDS Spro_0163 NC_009832.1 184406 185536 D PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: yen:YE0171 UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase 184406..185536 Serratia proteamaculans 568 5605189 YP_001476402.1 CDS wecC NC_009832.1 185533 186795 D catalyzes the oxidation of UDP-N-acetyl-D-mannosamine to UDP-N-acetylmannosaminuronic acid; UDP-N-acetyl-D-mannosamine dehydrogenase 185533..186795 Serratia proteamaculans 568 5605232 YP_001476403.1 CDS Spro_0165 NC_009832.1 186792 187859 D TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: ypi:YpsIP31758_0186 dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase 186792..187859 Serratia proteamaculans 568 5605233 YP_001476404.1 CDS Spro_0166 NC_009832.1 187911 188792 D TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: ypi:YpsIP31758_0187 glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylyltransferase 187911..188792 Serratia proteamaculans 568 5605234 YP_001476405.1 CDS Spro_0167 NC_009832.1 188770 189501 D TIGRFAM: TDP-D-fucosamine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: ypi:YpsIP31758_0188 TDP-D-fucosamine acetyltransferase; TDP-fucosamine acetyltransferase 188770..189501 Serratia proteamaculans 568 5605287 YP_001476406.1 CDS Spro_0168 NC_009832.1 189488 190618 D catalyzes the formation of dTDP-D-fucosamine from dTDP-4-oxo-6-deoxy-D-glucose in enterobacterial common antigen biosynthesis; TDP-4-oxo-6-deoxy-D-glucose transaminase 189488..190618 Serratia proteamaculans 568 5605288 YP_001476407.1 CDS Spro_0169 NC_009832.1 190620 191870 D PFAM: polysaccharide biosynthesis protein; KEGG: yen:YE0177 putative lipopolysaccharide biosynthesis protein; polysaccharide biosynthesis protein 190620..191870 Serratia proteamaculans 568 5605301 YP_001476408.1 CDS Spro_0170 NC_009832.1 191867 192952 D catalyzes the synthesis of a lipid-linked intermediate involved in ECA synthesis; 4-alpha-L-fucosyltransferase 191867..192952 Serratia proteamaculans 568 5605302 YP_001476409.1 CDS Spro_0171 NC_009832.1 192949 194325 D enterobacterial common antigen polymerase; putative common antigen polymerase 192949..194325 Serratia proteamaculans 568 5605303 YP_001476410.1 CDS Spro_0172 NC_009832.1 194339 195079 D TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; KEGG: ypi:YpsIP31758_0193 glycosyl transferase, WecB/TagA/CpsF family; putative UDP-N-acetyl-D-mannosaminuronic acid transferase 194339..195079 Serratia proteamaculans 568 5605354 YP_001476411.1 CDS Spro_0173 NC_009832.1 195448 196851 D uncharacterized member of the amino acid-polyamine-organocation (APC) superfamily of amino acid transporters; unknown function; putative transport protein YifK 195448..196851 Serratia proteamaculans 568 5605355 YP_001476412.1 CDS Spro_0174 NC_009832.1 197585 197827 R hypothetical protein complement(197585..197827) Serratia proteamaculans 568 5605454 YP_001476413.1 CDS Spro_0175 NC_009832.1 198310 199506 R TIGRFAM: HemY protein; PFAM: HemY domain protein; Tetratricopeptide TPR_2 repeat protein; KEGG: yen:YE0184 putative protoheme IX biogenesis protein; putative protoheme IX biogenesis protein complement(198310..199506) Serratia proteamaculans 568 5605363 YP_001476414.1 CDS Spro_0176 NC_009832.1 199510 200634 R PFAM: protein of unknown function DUF513 hemX; KEGG: yen:YE0185 putative uroporphyrin-III C-methyltransferase; putative uroporphyrinogen III C-methyltransferase complement(199510..200634) Serratia proteamaculans 568 5605364 YP_001476415.1 CDS hemD NC_009832.1 200658 201398 R catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; functions in tetrapyrrole and heme biosynthesis; uroporphyrinogen-III synthase complement(200658..201398) Serratia proteamaculans 568 5605365 YP_001476416.1 CDS hemC NC_009832.1 201395 202336 R transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase complement(201395..202336) Serratia proteamaculans 568 5605368 YP_001476417.1 CDS cyaA NC_009832.1 202653 205205 D catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP; adenylate cyclase 202653..205205 Serratia proteamaculans 568 5605369 YP_001476418.1 CDS cyaY NC_009832.1 205252 205572 R defects in the mitochondrial frataxin protein cause Friedreich ataxis which is an autosomal recessive neurodegenerative disease; based on phylogenomic distribution this protein may have a role in iron-sulfur cluster protein assembly; frataxin-like protein complement(205252..205572) Serratia proteamaculans 568 5605409 YP_001476419.1 CDS Spro_0181 NC_009832.1 205645 205857 D KEGG: ypp:YPDSF_3463 lipoprotein; lipoprotein 205645..205857 Serratia proteamaculans 568 5605410 YP_001476420.1 CDS dapF NC_009832.1 205915 206739 D involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 205915..206739 Serratia proteamaculans 568 5605411 YP_001476421.1 CDS Spro_0183 NC_009832.1 206736 207440 D PFAM: protein of unknown function DUF484; KEGG: ypi:YpsIP31758_0206 hypothetical protein; hypothetical protein 206736..207440 Serratia proteamaculans 568 5605441 YP_001476422.1 CDS xerC NC_009832.1 207437 208348 D site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC 207437..208348 Serratia proteamaculans 568 5605442 YP_001476423.1 CDS Spro_0185 NC_009832.1 208348 209064 D YigB; member of the haloacid dehalogenase (HAD)-like hydrolases superfamily of protein; unknown function; flavin mononucleotide phosphatase 208348..209064 Serratia proteamaculans 568 5605443 YP_001476424.1 CDS uvrD NC_009832.1 209133 211304 D unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present; involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair.; DNA-dependent helicase II 209133..211304 Serratia proteamaculans 568 5605447 YP_001476425.1 CDS Spro_0187 NC_009832.1 211347 211826 R KEGG: kpn:KPN_02730 hypothetical protein; hypothetical protein complement(211347..211826) Serratia proteamaculans 568 5605448 YP_001476426.1 CDS Spro_0188 NC_009832.1 212272 213222 D responsible for the influx of magnesium ions; magnesium/nickel/cobalt transporter CorA 212272..213222 Serratia proteamaculans 568 5605449 YP_001476427.1 CDS Spro_0189 NC_009832.1 213334 214392 D PFAM: putative ammonia monooxygenase; KEGG: eca:ECA4176 putative membrane protein; putative ammonia monooxygenase 213334..214392 Serratia proteamaculans 568 5605572 YP_001476428.1 CDS Spro_0190 NC_009832.1 214401 215288 R TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane; KEGG: ypi:YpsIP31758_0215 RarD protein; transporter DMT superfamily protein complement(214401..215288) Serratia proteamaculans 568 5605573 YP_001476429.1 CDS Spro_0191 NC_009832.1 215353 215823 R PFAM: thioesterase superfamily protein; KEGG: ypi:YpsIP31758_0216 thioesterase family protein; hypothetical protein complement(215353..215823) Serratia proteamaculans 568 5605574 YP_001476430.1 CDS Spro_0192 NC_009832.1 216024 216902 D catalyzes the hydrolysis of phosphatidylcholine; phospholipase A 216024..216902 Serratia proteamaculans 568 5605584 YP_001476431.1 CDS Spro_0193 NC_009832.1 216939 218783 D functions in blocking illegitimate recombination, enhancing topoisomerase activity, initiating SOS signaling and clearing blocked replication forks; component of the RecF recombinational pathway; ATP-dependent DNA helicase RecQ 216939..218783 Serratia proteamaculans 568 5605585 YP_001476432.1 CDS Spro_0194 NC_009832.1 218796 219422 D TIGRFAM: homoserine/threonine efflux pump; PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: yen:YE0205 threonine efflux protein; threonine efflux system 218796..219422 Serratia proteamaculans 568 5605622 YP_001476433.1 CDS rhtB NC_009832.1 219475 220095 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: eca:ECA4170 homoserine/homoserine lactone efflux protein; homoserine/homoserine lactone efflux protein complement(219475..220095) Serratia proteamaculans 568 5605623 YP_001476434.1 CDS Spro_0196 NC_009832.1 220238 221275 D lecithinase B; catalyzes the conversion of 1-lysophosphatidylcholine to glycerophosphocholine; can also hydrolyze 2-acyl glycerophosphoethanolamine and other substrates; lysophospholipase L2 220238..221275 Serratia proteamaculans 568 5605624 YP_001476435.1 CDS Spro_0197 NC_009832.1 221287 222087 D purine and pyrimidine nucleotides are secondary substrates; yigL expression is regulated by heat shock, osmotic shock and starvation of glucose, phosphate or ammonium; putative sugar phosphatase 221287..222087 Serratia proteamaculans 568 5605634 YP_001476436.1 CDS glpQ NC_009832.1 222123 223202 R hydrolyzes deacylated phospholipids to glycerol 3-phosphate and the corresponding alcohols; periplasmic; glycerophosphodiester phosphodiesterase complement(222123..223202) Serratia proteamaculans 568 5605635 YP_001476437.1 CDS glpT NC_009832.1 223278 224633 R catalyzes the uptake of glycerol-3-phosphate into the cell with the simultaneous export of inorganic phosphate from the cell; sn-glycerol-3-phosphate transporter complement(223278..224633) Serratia proteamaculans 568 5605636 YP_001476438.1 CDS glpA NC_009832.1 224999 226642 D anaerobic, catalyzes the conversion of glycerol 3-phosphate to dihydroxyacetone using fumarate or nitrate as electron acceptor; sn-glycerol-3-phosphate dehydrogenase subunit A 224999..226642 Serratia proteamaculans 568 5605657 YP_001476439.1 CDS Spro_0201 NC_009832.1 226629 227903 D sn-glycerol-3-phosphate dehydrogenase (anaerobic); catalyzes the formation of dihydroxyacetone from glycerol 3-phosphate; part of GlpABC complex; presumably this subunit is responsible for membrane interactions and contains iron-sulfur clusters; anaerobic glycerol-3-phosphate dehydrogenase subunit B 226629..227903 Serratia proteamaculans 568 5605658 YP_001476440.1 CDS glpC NC_009832.1 227900 229099 D anaerobic; with GlpAB catalyzes the conversion of glycerol-3-phosphate to dihydroxyacetone phosphate; sn-glycerol-3-phosphate dehydrogenase subunit C 227900..229099 Serratia proteamaculans 568 5605659 YP_001476441.1 CDS Spro_0203 NC_009832.1 229135 229698 R KEGG: eca:ECA4355 putative lipoprotein; hypothetical protein complement(229135..229698) Serratia proteamaculans 568 5605662 YP_001476442.1 CDS Spro_0204 NC_009832.1 229834 230499 R TIGRFAM: conserved hypothetical integral membrane protein; PFAM: protein of unknown function DUF165; KEGG: yen:YE0216 hypothetical protein; hypothetical protein complement(229834..230499) Serratia proteamaculans 568 5605663 YP_001476443.1 CDS Spro_0205 NC_009832.1 230845 231090 D PFAM: SirA family protein; KEGG: ypi:YpsIP31758_0232 sulfurtransferase TusA; SirA family protein 230845..231090 Serratia proteamaculans 568 5605775 YP_001476444.1 CDS Spro_0206 NC_009832.1 231066 232232 R KEGG: plu:plu0508 hypothetical protein; hypothetical protein complement(231066..232232) Serratia proteamaculans 568 5605776 YP_001476445.1 CDS Spro_0207 NC_009832.1 232232 233368 R KEGG: plu:plu0509 hypothetical protein; hypothetical protein complement(232232..233368) Serratia proteamaculans 568 5605777 YP_001476446.1 CDS Spro_0208 NC_009832.1 233368 234438 R KEGG: stt:t3689 hypothetical protein; hypothetical protein complement(233368..234438) Serratia proteamaculans 568 5605821 YP_001476447.1 CDS zntA NC_009832.1 234592 236907 R P-type ATPase involved in the export of lead, cadmium, zinc and mercury; zinc/cadmium/mercury/lead-transporting ATPase complement(234592..236907) Serratia proteamaculans 568 5605822 YP_001476448.1 CDS Spro_0210 NC_009832.1 237472 238986 D KEGG: eca:ECA2785 metalloprotease; PFAM: Hemolysin-type calcium-binding region; peptidase M10A and M12B matrixin and adamalysin; Peptidase M10 serralysin; SMART: peptidase metallopeptidase; serralysin 237472..238986 Serratia proteamaculans 568 5605823 YP_001476449.1 CDS Spro_0211 NC_009832.1 239102 239416 D PFAM: metalloprotease inhibitor I38; KEGG: pap:PSPA7_4142 alkaline proteinase inhibitor AprI; metalloprotease inhibitor I38 239102..239416 Serratia proteamaculans 568 5605866 YP_001476450.1 CDS Spro_0212 NC_009832.1 239454 240080 R PFAM: YhhN family protein; KEGG: yen:YE0219 hypothetical protein; YhhN family protein complement(239454..240080) Serratia proteamaculans 568 5605867 YP_001476451.1 CDS Spro_0213 NC_009832.1 240272 241024 R PFAM: regulatory protein LuxR; LuxR family transcriptional regulator complement(240272..241024) Serratia proteamaculans 568 5605868 YP_001476452.1 CDS Spro_0214 NC_009832.1 241085 242242 R PFAM: CblD family pilus biogenesis initiator protein; KEGG: stt:t2547 putative fimbrail protein; CblD family pilus biogenesis initiator protein complement(241085..242242) Serratia proteamaculans 568 5605955 YP_001476453.1 CDS Spro_0215 NC_009832.1 242263 244890 R KEGG: spt:SPA2453 outermembrane fimbrial usher protein; outermembrane fimbrial usher protein complement(242263..244890) Serratia proteamaculans 568 5605956 YP_001476454.1 CDS Spro_0216 NC_009832.1 244975 245508 R PFAM: CS1 type fimbrial major subunit; KEGG: sec:SC0301 putative fimbrial subunit; CS1 type fimbrial major subunit complement(244975..245508) Serratia proteamaculans 568 5605957 YP_001476455.1 CDS Spro_0217 NC_009832.1 245518 246252 R KEGG: stt:t2550 putative fimbrial protein; putative fimbrial protein complement(245518..246252) Serratia proteamaculans 568 5606022 YP_001476456.1 CDS Spro_0218 NC_009832.1 246627 247202 R PFAM: integrase family protein; KEGG: stm:STM0716 putative phage integrase; integrase family protein complement(246627..247202) Serratia proteamaculans 568 5606023 YP_001476457.1 CDS Spro_0219 NC_009832.1 247450 247722 R PFAM: protein of unknown function DUF1145; KEGG: yen:YE0223 hypothetical protein; hypothetical protein complement(247450..247722) Serratia proteamaculans 568 5606077 YP_001476458.1 CDS rsmD NC_009832.1 247712 248332 R catalyzes the methylation of 16S rRNA at position G966; 16S rRNA m(2)G966-methyltransferase complement(247712..248332) Serratia proteamaculans 568 5606078 YP_001476459.1 CDS Spro_0221 NC_009832.1 248556 250163 D KEGG: yen:YE0225 cell division protein; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; signal recognition particle-docking protein FtsY 248556..250163 Serratia proteamaculans 568 5606079 YP_001476460.1 CDS Spro_0222 NC_009832.1 250169 250840 D putative ATP-binding protein of an ATP-binding cassette transporter; when bound to FtsX, FtsEX localizes to the cell division site and plays a role in the assembly or stability of the septal ring under low-salt growth conditions; cell division protein FtsE 250169..250840 Serratia proteamaculans 568 5606109 YP_001476461.1 CDS ftsX NC_009832.1 250830 251783 D putative ABC transporter, membrane protein; cell division protein FtsX 250830..251783 Serratia proteamaculans 568 5606110 YP_001476462.1 CDS Spro_0224 NC_009832.1 252100 252957 D binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32 252100..252957 Serratia proteamaculans 568 5606111 YP_001476463.1 CDS Spro_0225 NC_009832.1 253017 255074 R KEGG: pen:PSEEN2727 hypothetical protein; hypothetical protein complement(253017..255074) Serratia proteamaculans 568 5606213 YP_001476464.1 CDS Spro_0226 NC_009832.1 255061 256278 R KEGG: pen:PSEEN2726 hypothetical protein; hypothetical protein complement(255061..256278) Serratia proteamaculans 568 5606214 YP_001476465.1 CDS Spro_0227 NC_009832.1 256275 256667 R PFAM: GCN5-related N-acetyltransferase; KEGG: yps:YPTB0225 putative acetyltransferase; GCN5-like N-acetyltransferase complement(256275..256667) Serratia proteamaculans 568 5606215 YP_001476466.1 CDS Spro_0228 NC_009832.1 257074 258189 D PFAM: Extracellular ligand-binding receptor; KEGG: yen:YE0230 branched-chain amino acid-binding protein; extracellular ligand-binding receptor 257074..258189 Serratia proteamaculans 568 5606222 YP_001476467.1 CDS Spro_0229 NC_009832.1 258306 259232 D LivHMGF is the membrane component of the LIV-I/LS branched-chain amino acid transporter; branched-chain amino acid transporter permease LivH 258306..259232 Serratia proteamaculans 568 5606223 YP_001476468.1 CDS livM NC_009832.1 259229 260512 D Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; leucine/isoleucine/valine transporter permease 259229..260512 Serratia proteamaculans 568 5606336 YP_001476469.1 CDS livG NC_009832.1 260509 261276 D Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; leucine/isoleucine/valine transporter ATP-binding subunit 260509..261276 Serratia proteamaculans 568 5606337 YP_001476470.1 CDS livF NC_009832.1 261280 261981 D with LivGHMJ and LivGHMK is part of the high-affinity branched-chain amino acid transport system; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; leucine/isoleucine/valine transporter ATP-binding subunit 261280..261981 Serratia proteamaculans 568 5606338 YP_001476471.1 CDS Spro_0233 NC_009832.1 262024 263211 D PFAM: aminotransferase class I and II; KEGG: eca:ECA4336 putative aminotransferase; GntR family transcriptional regulator 262024..263211 Serratia proteamaculans 568 5606421 YP_001476472.1 CDS Spro_0234 NC_009832.1 263403 264722 D with UgpACE is involved in the uptake of glycerol-3-phosphate; glycerol-3-phosphate transporter periplasmic binding protein 263403..264722 Serratia proteamaculans 568 5606422 YP_001476473.1 CDS Spro_0235 NC_009832.1 264837 265724 D with UgpEC is involved in the uptake of glycerol-3-phosphate; glycerol-3-phosphate transporter permease 264837..265724 Serratia proteamaculans 568 5606423 YP_001476474.1 CDS Spro_0236 NC_009832.1 265721 266566 D with UgpABC is involved in uptake of glycerol-3-phosphate; glycerol-3-phosphate transporter membrane protein 265721..266566 Serratia proteamaculans 568 5606433 YP_001476475.1 CDS ugpC NC_009832.1 266571 267644 D part of the UgpABCE glycerol-3-phosphate uptake system; glycerol-3-phosphate transporter ATP-binding subunit 266571..267644 Serratia proteamaculans 568 5606434 YP_001476476.1 CDS ugpQ NC_009832.1 267641 268390 D hydrolyzes diesters during transport at the inner face of the cytoplasmic membrane to glycerol-3-phosphate and alcohol; induced when cells are starved for inorganic phosphate; cytoplasmic glycerophosphodiester phosphodiesterase 267641..268390 Serratia proteamaculans 568 5606435 YP_001476477.1 CDS Spro_0239 NC_009832.1 268387 268716 R hypothetical protein complement(268387..268716) Serratia proteamaculans 568 5606444 YP_001476478.1 CDS Spro_0240 NC_009832.1 268869 269732 D TIGRFAM: carboxylate/amino acid/amine transporter; PFAM: protein of unknown function DUF6 transmembrane; KEGG: ypp:YPDSF_3407 membrane protein; carboxylate/amino acid/amine transporter 268869..269732 Serratia proteamaculans 568 5606445 YP_001476479.1 CDS Spro_0241 NC_009832.1 269766 270716 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ypi:YpsIP31758_0262 transcriptional regulator MetR; LysR family transcriptional regulator complement(269766..270716) Serratia proteamaculans 568 5606446 YP_001476480.1 CDS Spro_0242 NC_009832.1 270822 273098 D catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase 270822..273098 Serratia proteamaculans 568 5606482 YP_001476481.1 CDS Spro_0243 NC_009832.1 273203 274039 R PFAM: dienelactone hydrolase; KEGG: ypi:YpsIP31758_0265 dienelactone hydrolase family protein; carboxymethylenebutenolidase complement(273203..274039) Serratia proteamaculans 568 5606483 YP_001476482.1 CDS Spro_0244 NC_009832.1 274546 275307 D catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate; involved in the pyrimidine salvage pathway; uridine phosphorylase 274546..275307 Serratia proteamaculans 568 5606544 YP_001476483.1 CDS Spro_0245 NC_009832.1 275478 276260 D KEGG: yen:YE0252 hypothetical protein; protein tyrosine/serine phosphatase 275478..276260 Serratia proteamaculans 568 5606545 YP_001476484.1 CDS Spro_0246 NC_009832.1 276348 276878 D KEGG: ypi:YpsIP31758_0269 DedA family protein; DedA family protein 276348..276878 Serratia proteamaculans 568 5606546 YP_001476485.1 CDS Spro_0247 NC_009832.1 277019 278566 D PFAM: protein of unknown function DUF195; KEGG: ypi:YpsIP31758_0270 RmuC domain protein; hypothetical protein 277019..278566 Serratia proteamaculans 568 5606557 YP_001476486.1 CDS ubiE NC_009832.1 278646 279401 D Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase 278646..279401 Serratia proteamaculans 568 5606558 YP_001476487.1 CDS Spro_0249 NC_009832.1 279403 280023 D PFAM: Sterol-binding domain protein; KEGG: yen:YE0257 hypothetical protein; sterol-binding domain-containing protein 279403..280023 Serratia proteamaculans 568 5606559 YP_001476488.1 CDS ubiB NC_009832.1 280020 281651 D an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone; functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis; similar to eukaryotic proteins that exhibit kinase functions; putative ubiquinone biosynthesis protein UbiB 280020..281651 Serratia proteamaculans 568 5606593 YP_001476489.1 CDS Spro_0251 NC_009832.1 281732 281995 D TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: plu:plu4410 sec-independent protein translocase protein; twin arginine-targeting protein translocase 281732..281995 Serratia proteamaculans 568 5606594 YP_001476490.1 CDS Spro_0252 NC_009832.1 281999 282565 D TIGRFAM: twin-arginine translocation protein, TatB subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: yps:YPTB0259 sec-independent protein translocase protein TatB; twin-arginine translocation protein, TatB subunit 281999..282565 Serratia proteamaculans 568 5606595 YP_001476491.1 CDS Spro_0253 NC_009832.1 282569 283339 D with TatABE forms the twin-arginine translocation complex which is involved in the transport of proteins across the cytoplasmic membrane; twin-arginine protein translocation system subunit TatC 282569..283339 Serratia proteamaculans 568 5606602 YP_001476492.1 CDS Spro_0254 NC_009832.1 283392 284174 D magnesium dependent; not involved in the Sec-independent protein export system; DNase TatD 283392..284174 Serratia proteamaculans 568 5606603 YP_001476493.1 CDS Spro_0255 NC_009832.1 284189 285211 D catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 284189..285211 Serratia proteamaculans 568 5606604 YP_001476494.1 CDS rfaH NC_009832.1 285258 285746 R TIGRFAM: transcriptional activator RfaH; PFAM: NGN domain protein; KEGG: eca:ECA0204 transcriptional activator; transcriptional activator RfaH complement(285258..285746) Serratia proteamaculans 568 5606605 YP_001476495.1 CDS Spro_0257 NC_009832.1 285991 286716 D alpha-aspartyl dipeptidase; catalyzes the hydrolysis of dipeptides with an N-terminal aspartate residue; belongs to peptidase S51 family; peptidase E 285991..286716 Serratia proteamaculans 568 5606606 YP_001476496.1 CDS Spro_0258 NC_009832.1 286781 288301 D catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol; 3-octaprenyl-4-hydroxybenzoate decarboxylase 286781..288301 Serratia proteamaculans 568 5606610 YP_001476497.1 CDS fre NC_009832.1 288352 289053 D NAD(P)H-flavin reductase; catalyzes the reversible oxidation/reduction of NAD(P) and flavine mononucleotide; in Salmonella and E. coli this protein also reduces aquacob(III)alamin to cob(II)alamin; FMN reductase 288352..289053 Serratia proteamaculans 568 5606611 YP_001476498.1 CDS fadA NC_009832.1 289224 290387 R FadA; fatty acid oxidation complex component beta; functions in a heterotetramer with FadB; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids; 3-ketoacyl-CoA thiolase complement(289224..290387) Serratia proteamaculans 568 5606612 YP_001476499.1 CDS fadB NC_009832.1 290398 292587 R includes enoyl-CoA hydratase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, 3-hydroxyacyl-CoA dehydrogenase, and 3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities; forms a heterotetramer with FadA; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids; multifunctional fatty acid oxidation complex subunit alpha complement(290398..292587) Serratia proteamaculans 568 5606613 YP_001476500.1 CDS Spro_0262 NC_009832.1 292821 294017 D PFAM: major facilitator superfamily MFS_1; KEGG: aha:AHA_1632 probable MFS transporter; major facilitator transporter 292821..294017 Serratia proteamaculans 568 5606614 YP_001476501.1 CDS Spro_0263 NC_009832.1 294135 295466 D catalyzes the hydrolysis of dipeptides with a proline at the C-terminal; also catalyzes the low efficiency hydrolysis of organophosphate di- and tri-esters; proline dipeptidase 294135..295466 Serratia proteamaculans 568 5606615 YP_001476502.1 CDS Spro_0264 NC_009832.1 295466 296080 D PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: ypi:YpsIP31758_0285 hypothetical protein; hypothetical protein 295466..296080 Serratia proteamaculans 568 5606697 YP_001476503.1 CDS Spro_0265 NC_009832.1 296115 297566 D TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter; KEGG: yps:YPTB0270 Trk system potassium uptake protein TrkH; potassium transporter 296115..297566 Serratia proteamaculans 568 5606698 YP_001476504.1 CDS hemG NC_009832.1 297589 298122 D catalyzes the oxidation of protoporphyrinogen IX to form protoporphyrin IX; protoporphyrinogen oxidase 297589..298122 Serratia proteamaculans 568 5606699 YP_001476505.1 CDS Spro_0267 NC_009832.1 304136 305173 D KEGG: eca:ECA0213 UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: FAD linked oxidase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase 304136..305173 Serratia proteamaculans 568 5603409 YP_001476506.1 CDS Spro_0268 NC_009832.1 305170 306132 D catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon; biotin--protein ligase 305170..306132 Serratia proteamaculans 568 5606782 YP_001476507.1 CDS Spro_0269 NC_009832.1 306179 307129 R catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis; pantothenate kinase complement(306179..307129) Serratia proteamaculans 568 5606919 YP_001476508.1 CDS Spro_0270 NC_009832.1 308218 309402 D EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 308218..309402 Serratia proteamaculans 568 5606033 YP_001476509.1 CDS secE NC_009832.1 309660 310043 D forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 309660..310043 Serratia proteamaculans 568 5606921 YP_001476510.1 CDS nusG NC_009832.1 310045 310590 D Modulates Rho-dependent transcription termination; transcription antitermination protein NusG 310045..310590 Serratia proteamaculans 568 5606953 YP_001476511.1 CDS Spro_0273 NC_009832.1 310749 311177 D PFAM: ribosomal protein L11; KEGG: sgl:SG0130 50S ribosomal protein L11; 50S ribosomal protein L11 310749..311177 Serratia proteamaculans 568 5606954 YP_001476512.1 CDS rplA NC_009832.1 311181 311885 D in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 311181..311885 Serratia proteamaculans 568 5606955 YP_001476513.1 CDS rplJ NC_009832.1 312228 312725 D binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 312228..312725 Serratia proteamaculans 568 5606962 YP_001476514.1 CDS rplL NC_009832.1 312788 313153 D present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 312788..313153 Serratia proteamaculans 568 5606963 YP_001476515.1 CDS rpoB NC_009832.1 313487 317515 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 313487..317515 Serratia proteamaculans 568 5606964 YP_001476516.1 CDS Spro_0278 NC_009832.1 317634 321860 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 317634..321860 Serratia proteamaculans 568 5607012 YP_001476517.1 CDS thiH NC_009832.1 322193 323326 R in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center; thiamine biosynthesis protein ThiH complement(322193..323326) Serratia proteamaculans 568 5607013 YP_001476518.1 CDS thiG NC_009832.1 323326 324105 R functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase complement(323326..324105) Serratia proteamaculans 568 5607020 YP_001476519.1 CDS Spro_0281 NC_009832.1 324107 324307 R with ThiF, ThiG, and ThiO catalyzes the formation of the thiazole moiety of thiamine pyrophosphate; sulfur carrier protein ThiS complement(324107..324307) Serratia proteamaculans 568 5607021 YP_001476520.1 CDS Spro_0282 NC_009832.1 324304 325053 R PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: eca:ECA0230 thiamine biosynthesis adenylyltransferase; UBA/THIF-type NAD/FAD binding protein complement(324304..325053) Serratia proteamaculans 568 5607022 YP_001476521.1 CDS Spro_0283 NC_009832.1 325058 325696 R catalyzes the formation of thiamine monophosphate from 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate; thiamine-phosphate pyrophosphorylase complement(325058..325696) Serratia proteamaculans 568 5607050 YP_001476522.1 CDS Spro_0284 NC_009832.1 325689 327632 R required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC complement(325689..327632) Serratia proteamaculans 568 5607051 YP_001476523.1 CDS Spro_0285 NC_009832.1 327912 328415 R binds specifically to the major sigma factor sigma 70; active in stationary phase; anti-RNA polymerase sigma 70 factor complement(327912..328415) Serratia proteamaculans 568 5607052 YP_001476524.1 CDS nudC NC_009832.1 328515 329282 D can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH; requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5'-phosphates; NADH pyrophosphatase 328515..329282 Serratia proteamaculans 568 5607062 YP_001476525.1 CDS hemE NC_009832.1 329323 330387 D catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 329323..330387 Serratia proteamaculans 568 5607063 YP_001476526.1 CDS Spro_0288 NC_009832.1 330397 331083 D Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA; cleaves DNA containing urea residues, AP sites, base mismatches, insertion/deletion mismatches, flaps, and pseudo-Y structures; endonuclease V 330397..331083 Serratia proteamaculans 568 5607064 YP_001476527.1 CDS Spro_0289 NC_009832.1 331132 331722 D PFAM: protein of unknown function DUF416; KEGG: yen:YE0299 hypothetical protein; hypothetical protein 331132..331722 Serratia proteamaculans 568 5607111 YP_001476528.1 CDS Spro_0290 NC_009832.1 331911 332183 D histone-like DNA-binding protein; transcriptional regulator HU subunit alpha 331911..332183 Serratia proteamaculans 568 5607112 YP_001476529.1 CDS Spro_0291 NC_009832.1 332253 332891 D PFAM: protein of unknown function DUF1481; KEGG: yen:YE0301 hypothetical protein; hypothetical protein 332253..332891 Serratia proteamaculans 568 5607113 YP_001476530.1 CDS Spro_0292 NC_009832.1 332937 334220 R catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase complement(332937..334220) Serratia proteamaculans 568 5607181 YP_001476531.1 CDS purH NC_009832.1 334269 335858 R involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase complement(334269..335858) Serratia proteamaculans 568 5607182 YP_001476532.1 CDS Spro_0294 NC_009832.1 341925 347828 D PFAM: coagulation factor 5/8 type domain protein; type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: fno:Fnod_0251 hypothetical protein; coagulation factor 5/8 type domain-containing protein 341925..347828 Serratia proteamaculans 568 5607232 YP_001476533.1 CDS actP NC_009832.1 347914 349566 R member of the sodium:solute symporter family; cotranscribed with the acs gene which encodes acetyl coenzyme A synthase; mutations affect acetate uptake; acetate permease complement(347914..349566) Serratia proteamaculans 568 5607196 YP_001476534.1 CDS Spro_0296 NC_009832.1 349563 349874 R PFAM: protein of unknown function DUF485; KEGG: yen:YE0308 hypothetical protein; hypothetical protein complement(349563..349874) Serratia proteamaculans 568 5607197 YP_001476535.1 CDS Spro_0297 NC_009832.1 349967 351925 R Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase complement(349967..351925) Serratia proteamaculans 568 5607236 YP_001476536.1 CDS Spro_0298 NC_009832.1 352747 354063 D PFAM: sodium:dicarboxylate symporter; KEGG: yen:YE0310 proton glutamate symport protein; sodium:dicarboxylate symporter 352747..354063 Serratia proteamaculans 568 5607237 YP_001476537.1 CDS Spro_0299 NC_009832.1 354129 354878 R PFAM: Peptidoglycan-binding LysM; peptidase M23B; KEGG: yen:YE2451 putative lipoprotein; peptidase M23B complement(354129..354878) Serratia proteamaculans 568 5607238 YP_001476538.1 CDS Spro_0300 NC_009832.1 355043 355789 D PFAM: protein of unknown function DUF81; KEGG: yen:YE3446 hypothetical protein; hypothetical protein 355043..355789 Serratia proteamaculans 568 5607246 YP_001476539.1 CDS Spro_0301 NC_009832.1 356010 356936 D KEGG: eca:ECA0516 hypothetical protein; hypothetical protein 356010..356936 Serratia proteamaculans 568 5606946 YP_001476540.1 CDS Spro_0302 NC_009832.1 356933 358288 D TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; KEGG: plu:plu1031 unnamed protein product; similar to DNA helicase; replicative DNA helicase 356933..358288 Serratia proteamaculans 568 5607248 YP_001476541.1 CDS Spro_0303 NC_009832.1 358291 360027 D KEGG: stt:t4228 hypothetical protein; hypothetical protein 358291..360027 Serratia proteamaculans 568 5607268 YP_001476542.1 CDS Spro_0304 NC_009832.1 360027 360572 D KEGG: eca:ECA0552 hypothetical protein; hypothetical protein 360027..360572 Serratia proteamaculans 568 5607269 YP_001476543.1 CDS Spro_0305 NC_009832.1 360736 361365 D KEGG: plu:plu1034 hypothetical protein; hypothetical protein 360736..361365 Serratia proteamaculans 568 5605994 YP_001476544.1 CDS Spro_0306 NC_009832.1 361362 361625 D KEGG: eca:ECA0522A hypothetical protein; hypothetical protein 361362..361625 Serratia proteamaculans 568 5605995 YP_001476545.1 CDS Spro_0307 NC_009832.1 361740 363011 D KEGG: plu:plu1035 hypothetical protein; hypothetical protein 361740..363011 Serratia proteamaculans 568 5605996 YP_001476546.1 CDS Spro_0308 NC_009832.1 363199 363942 D PFAM: Domain of unknown function DUF1845; KEGG: plu:plu1036 hypothetical protein; hypothetical protein 363199..363942 Serratia proteamaculans 568 5605904 YP_001476547.1 CDS Spro_0309 NC_009832.1 363939 364514 D hypothetical protein 363939..364514 Serratia proteamaculans 568 5605905 YP_001476548.1 CDS Spro_0310 NC_009832.1 364529 366568 D decatenates replicating daughter chromosomes; DNA topoisomerase III 364529..366568 Serratia proteamaculans 568 5605906 YP_001476549.1 CDS Spro_0311 NC_009832.1 367237 367704 D KEGG: plu:plu1038 hypothetical protein; hypothetical protein 367237..367704 Serratia proteamaculans 568 5603632 YP_001476550.1 CDS Spro_0312 NC_009832.1 367777 368283 D TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: yen:YE3844 single-strand binding protein; single-strand binding protein 367777..368283 Serratia proteamaculans 568 5603633 YP_001476551.1 CDS Spro_0313 NC_009832.1 368618 368785 R KEGG: ent:Ent638_1532 helix-turn-helix-domain containing protein, AraC type; hypothetical protein complement(368618..368785) Serratia proteamaculans 568 5603634 YP_001476552.1 CDS Spro_0314 NC_009832.1 368807 369052 D hypothetical protein 368807..369052 Serratia proteamaculans 568 5604858 YP_001476553.1 CDS Spro_0315 NC_009832.1 369227 369493 R KEGG: dra:DR_1587 hypothetical protein; hypothetical protein complement(369227..369493) Serratia proteamaculans 568 5604859 YP_001476554.1 CDS Spro_0316 NC_009832.1 369639 369965 D KEGG: mca:MCA0276 killer suppression protein HigA, putative; killer suppression protein HigA 369639..369965 Serratia proteamaculans 568 5604860 YP_001476555.1 CDS Spro_0317 NC_009832.1 369962 371044 D PFAM: protein of unknown function DUF955; KEGG: bxe:Bxe_A0212 hypothetical protein; hypothetical protein 369962..371044 Serratia proteamaculans 568 5604829 YP_001476556.1 CDS Spro_0318 NC_009832.1 371047 371991 R KEGG: bxe:Bxe_A0213 hypothetical protein; hypothetical protein complement(371047..371991) Serratia proteamaculans 568 5604830 YP_001476557.1 CDS Spro_0319 NC_009832.1 371991 372968 R PFAM: thymidylate synthase; KEGG: bxe:Bxe_A0214 putative thymidylate synthase; thymidylate synthase complement(371991..372968) Serratia proteamaculans 568 5604747 YP_001476558.1 CDS Spro_0320 NC_009832.1 373757 374401 D KEGG: pap:PSPA7_4470 type IV B pilus protein; type IV B pilus protein 373757..374401 Serratia proteamaculans 568 5604748 YP_001476559.1 CDS Spro_0321 NC_009832.1 374398 375141 D KEGG: stt:t4255 hypothetical protein; hypothetical protein 374398..375141 Serratia proteamaculans 568 5604749 YP_001476560.1 CDS Spro_0322 NC_009832.1 375152 375862 D KEGG: eca:ECA0555 hypothetical protein; hypothetical protein 375152..375862 Serratia proteamaculans 568 5604708 YP_001476561.1 CDS Spro_0323 NC_009832.1 375841 376533 D PFAM: Lytic transglycosylase catalytic; KEGG: eca:ECA0556 hypothetical protein; lytic transglycosylase 375841..376533 Serratia proteamaculans 568 5604709 YP_001476562.1 CDS Spro_0324 NC_009832.1 376536 377060 D KEGG: eca:ECA0557 hypothetical protein; hypothetical protein 376536..377060 Serratia proteamaculans 568 5604710 YP_001476563.1 CDS Spro_0325 NC_009832.1 377057 377647 D PFAM: restriction endonuclease; KEGG: eca:ECA0558 hypothetical protein; restriction endonuclease 377057..377647 Serratia proteamaculans 568 5604648 YP_001476564.1 CDS Spro_0326 NC_009832.1 377644 379758 D KEGG: eca:ECA0560 putative plasmid transfer protein; putative plasmid transfer protein 377644..379758 Serratia proteamaculans 568 5604649 YP_001476565.1 CDS Spro_0327 NC_009832.1 379739 380497 D KEGG: eca:ECA0561 hypothetical protein; hypothetical protein 379739..380497 Serratia proteamaculans 568 5604650 YP_001476566.1 CDS Spro_0328 NC_009832.1 380724 381341 R KEGG: eca:ECA0563 hypothetical protein; hypothetical protein complement(380724..381341) Serratia proteamaculans 568 5604646 YP_001476567.1 CDS Spro_0329 NC_009832.1 381523 381855 D PFAM: plasmid conserved hypothetical protein RAQPRD; KEGG: eca:ECA0564 hypothetical protein; hypothetical protein 381523..381855 Serratia proteamaculans 568 5604647 YP_001476568.1 CDS Spro_0330 NC_009832.1 381855 382097 D KEGG: eca:ECA0565 hypothetical protein; hypothetical protein 381855..382097 Serratia proteamaculans 568 5604424 YP_001476569.1 CDS Spro_0331 NC_009832.1 382153 382518 D KEGG: plu:plu1080 hypothetical protein; hypothetical protein 382153..382518 Serratia proteamaculans 568 5604425 YP_001476570.1 CDS Spro_0332 NC_009832.1 382530 382895 D KEGG: eca:ECA0567 hypothetical protein; hypothetical protein 382530..382895 Serratia proteamaculans 568 5604426 YP_001476571.1 CDS Spro_0333 NC_009832.1 382892 383563 D KEGG: eca:ECA0568 hypothetical protein; hypothetical protein 382892..383563 Serratia proteamaculans 568 5604372 YP_001476572.1 CDS Spro_0334 NC_009832.1 383560 384471 D KEGG: eca:ECA0569 hypothetical protein; hypothetical protein 383560..384471 Serratia proteamaculans 568 5604373 YP_001476573.1 CDS Spro_0335 NC_009832.1 384464 385960 D KEGG: eca:ECA0570 hypothetical protein; hypothetical protein 384464..385960 Serratia proteamaculans 568 5604374 YP_001476574.1 CDS Spro_0336 NC_009832.1 386110 386535 D KEGG: eca:ECA0572 putative lipoprotein; putative lipoprotein 386110..386535 Serratia proteamaculans 568 5604269 YP_001476575.1 CDS Spro_0337 NC_009832.1 386535 389393 D KEGG: eca:ECA0573 putative plasmid-related protein; putative plasmid-like protein 386535..389393 Serratia proteamaculans 568 5604270 YP_001476576.1 CDS Spro_0338 NC_009832.1 389390 389794 D KEGG: eca:ECA0574 hypothetical protein; hypothetical protein 389390..389794 Serratia proteamaculans 568 5604271 YP_001476577.1 CDS Spro_0339 NC_009832.1 389917 390909 D PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: pst:PSPTO_2960 pyridoxal-phosphate dependent enzyme family/ornithine cyclodeaminase family protein; pyridoxal-5'-phosphate-dependent protein subunit beta 389917..390909 Serratia proteamaculans 568 5604228 YP_001476578.1 CDS Spro_0340 NC_009832.1 390902 391936 D PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: vei:Veis_1206 ornithine cyclodeaminase/mu-crystallin; ornithine cyclodeaminase/mu-crystallin 390902..391936 Serratia proteamaculans 568 5604229 YP_001476579.1 CDS Spro_0341 NC_009832.1 391940 392929 D PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: ava:Ava_C0007 condensation domain; taurine catabolism dioxygenase TauD/TfdA 391940..392929 Serratia proteamaculans 568 5604230 YP_001476580.1 CDS Spro_0342 NC_009832.1 392916 394655 D TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; KEGG: bce:BC2456 peptide synthetase; amino acid adenylation domain-containing protein 392916..394655 Serratia proteamaculans 568 5604226 YP_001476581.1 CDS Spro_0343 NC_009832.1 394655 395380 D PFAM: Thioesterase; KEGG: bte:BTH_I2357 thioesterase type II; thioesterase 394655..395380 Serratia proteamaculans 568 5604227 YP_001476582.1 CDS Spro_0344 NC_009832.1 395402 396676 D PFAM: phosphoribosylglycinamide synthetase; KEGG: ypm:YP_3384 acetyl-CoA carboxylase; phosphoribosylglycinamide synthetase 395402..396676 Serratia proteamaculans 568 5604214 YP_001476583.1 CDS Spro_0345 NC_009832.1 396687 397859 D coenzyme F390 synthetase-like protein 396687..397859 Serratia proteamaculans 568 5604215 YP_001476584.1 CDS Spro_0346 NC_009832.1 397882 399714 D TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase class-II; asparagine synthase; KEGG: sus:Acid_4624 asparagine synthase (glutamine-hydrolyzing); asparagine synthase 397882..399714 Serratia proteamaculans 568 5604216 YP_001476585.1 CDS Spro_0347 NC_009832.1 399715 400665 D KEGG: bja:blr2082 hypothetical protein; hypothetical protein 399715..400665 Serratia proteamaculans 568 5604208 YP_001476586.1 CDS Spro_0348 NC_009832.1 400801 401205 D PFAM: protein of unknown function DUF1525; KEGG: eca:ECA0576 hypothetical protein; hypothetical protein 400801..401205 Serratia proteamaculans 568 5604209 YP_001476587.1 CDS Spro_0349 NC_009832.1 401207 402214 D PFAM: protein of unknown function DUF1527; KEGG: eca:ECA0577 hypothetical protein; hypothetical protein 401207..402214 Serratia proteamaculans 568 5604210 YP_001476588.1 CDS Spro_0350 NC_009832.1 402225 403709 D KEGG: eca:ECA0578 hypothetical protein; hypothetical protein 402225..403709 Serratia proteamaculans 568 5604179 YP_001476589.1 CDS Spro_0351 NC_009832.1 403726 404097 D KEGG: eca:ECA0579 hypothetical protein; hypothetical protein 403726..404097 Serratia proteamaculans 568 5604180 YP_001476590.1 CDS Spro_0352 NC_009832.1 404094 405611 D KEGG: eca:ECA0580 hypothetical protein; hypothetical protein 404094..405611 Serratia proteamaculans 568 5604181 YP_001476591.1 CDS Spro_0353 NC_009832.1 405612 405986 R KEGG: eca:ECA0581 hypothetical protein; hypothetical protein complement(405612..405986) Serratia proteamaculans 568 5604010 YP_001476592.1 CDS Spro_0354 NC_009832.1 406249 406821 D KEGG: osa:4352161 Os12g0450200; hypothetical protein 406249..406821 Serratia proteamaculans 568 5604011 YP_001476593.1 CDS Spro_0355 NC_009832.1 406808 407482 R KEGG: kpn:KPN_pKPN3p05885 transposase; transposase complement(406808..407482) Serratia proteamaculans 568 5603942 YP_001476594.1 CDS Spro_0356 NC_009832.1 407515 408558 D PFAM: Integrase catalytic region; KEGG: bvi:Bcep1808_7234 integrase, catalytic region; Integrase catalytic subunit 407515..408558 Serratia proteamaculans 568 5603943 YP_001476595.1 CDS Spro_0357 NC_009832.1 408555 409343 D PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: pst:PSPTO_B0039 transposase/IS protein; transposase/IS protein 408555..409343 Serratia proteamaculans 568 5603944 YP_001476596.1 CDS Spro_0358 NC_009832.1 409383 410204 R PFAM: transposase Tn3 family protein; KEGG: ent:Ent638_4224 transposase Tn3 family protein; transposase Tn3 family protein complement(409383..410204) Serratia proteamaculans 568 5603912 YP_001476597.1 CDS Spro_0361 NC_009832.1 411176 411460 R PFAM: transposase IS3/IS911 family protein; KEGG: pae:PA0983 hypothetical protein; transposase IS3/IS911 family protein complement(411176..411460) Serratia proteamaculans 568 5603914 YP_001476598.1 CDS Spro_0362 NC_009832.1 411840 412328 R PFAM: DinB family protein; KEGG: eca:ECA0612 hypothetical protein; DinB family protein complement(411840..412328) Serratia proteamaculans 568 5603839 YP_001476599.1 CDS Spro_0363 NC_009832.1 412613 412945 R KEGG: sen:SACE_4169 esterase/lipase; hypothetical protein complement(412613..412945) Serratia proteamaculans 568 5603840 YP_001476600.1 CDS Spro_0364 NC_009832.1 413017 413646 D PFAM: regulatory protein TetR; KEGG: fal:FRAAL5169 putative TetR-family transcriptional regulator; TetR family transcriptional regulator 413017..413646 Serratia proteamaculans 568 5603841 YP_001476601.1 CDS Spro_0365 NC_009832.1 413848 415095 D TIGRFAM: integral membrane protein, PqiA family; PFAM: Paraquat-inducible protein A; KEGG: ypi:YpsIP31758_2550 paraquat-inducible protein A; PqiA family integral membrane protein 413848..415095 Serratia proteamaculans 568 5603830 YP_001476602.1 CDS Spro_0366 NC_009832.1 415079 416722 D PFAM: Mammalian cell entry related domain protein; KEGG: yen:YE1574 putative paraquat-inducible protein B; paraquat-inducible protein B 415079..416722 Serratia proteamaculans 568 5603831 YP_001476603.1 CDS Spro_0367 NC_009832.1 416719 417267 D PFAM: protein of unknown function DUF330; KEGG: yen:YE1575 putative lipoprotein protein; hypothetical protein 416719..417267 Serratia proteamaculans 568 5603832 YP_001476604.1 CDS Spro_0368 NC_009832.1 417843 418454 D PFAM: plasmid conserved hypothetical protein RAQPRD; KEGG: eca:ECA0564 hypothetical protein; hypothetical protein 417843..418454 Serratia proteamaculans 568 5603697 YP_001476605.1 CDS Spro_0369 NC_009832.1 418454 418615 D KEGG: ppu:PP_5396 ISPpu14, transposase Orf3; hypothetical protein 418454..418615 Serratia proteamaculans 568 5603698 YP_001476606.1 CDS Spro_0370 NC_009832.1 418716 418871 D hypothetical protein 418716..418871 Serratia proteamaculans 568 5603608 YP_001476607.1 CDS Spro_0371 NC_009832.1 418937 419143 D KEGG: pfl:PFL_2517 hypothetical protein; hypothetical protein 418937..419143 Serratia proteamaculans 568 5603609 YP_001476608.1 CDS Spro_0372 NC_009832.1 419335 420297 D KEGG: rha:RHA1_ro01207 hypothetical protein; hypothetical protein 419335..420297 Serratia proteamaculans 568 5603610 YP_001476609.1 CDS Spro_0373 NC_009832.1 420594 421613 R PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: psp:PSPPH_3647 lipase; alpha/beta hydrolase domain-containing protein complement(420594..421613) Serratia proteamaculans 568 5603589 YP_001476610.1 CDS Spro_0374 NC_009832.1 422431 422853 D PFAM: regulatory protein MarR; KEGG: sfr:Sfri_0578 transcriptional regulator, MarR family protein; MarR family transcriptional regulator 422431..422853 Serratia proteamaculans 568 5603590 YP_001476611.1 CDS Spro_0375 NC_009832.1 423041 423304 D PFAM: transposase IS3/IS911 family protein; KEGG: yen:YE1810 insertion element protein; transposase IS3/IS911 family protein 423041..423304 Serratia proteamaculans 568 5603591 YP_001476612.1 CDS Spro_0376 NC_009832.1 423337 424161 D PFAM: Integrase catalytic region; KEGG: sec:SC173 hypothetical protein B; Integrase catalytic subunit 423337..424161 Serratia proteamaculans 568 5603577 YP_001476613.1 CDS Spro_0377 NC_009832.1 424320 425852 D PFAM: Catalase domain protein; KEGG: bch:Bcen2424_3898 catalase; catalase 424320..425852 Serratia proteamaculans 568 5603578 YP_001476614.1 CDS Spro_0378 NC_009832.1 425890 426450 D PFAM: Ankyrin; KEGG: xcb:XC_4036 ankyrin-like protein; ankyrin 425890..426450 Serratia proteamaculans 568 5603579 YP_001476615.1 CDS Spro_0379 NC_009832.1 426582 426866 R KEGG: kpn:KPN_pKPN5p08239 hypothetical protein; hypothetical protein complement(426582..426866) Serratia proteamaculans 568 5603559 YP_001476616.1 CDS Spro_0380 NC_009832.1 426863 426967 R hypothetical protein complement(426863..426967) Serratia proteamaculans 568 5603560 YP_001476617.1 CDS Spro_0381 NC_009832.1 426993 427436 R PFAM: Resolvase domain; KEGG: psp:PSPPH_A0101 DNA invertase; resolvase domain-containing protein complement(426993..427436) Serratia proteamaculans 568 5603448 YP_001476618.1 CDS Spro_0382 NC_009832.1 427534 430092 D TIGRFAM: YD repeat protein; KEGG: sbm:Shew185_0579 YD repeat protein; YD repeat-containing protein 427534..430092 Serratia proteamaculans 568 5603449 YP_001476619.1 CDS Spro_0383 NC_009832.1 430865 431011 D hypothetical protein 430865..431011 Serratia proteamaculans 568 5603450 YP_001476620.1 CDS Spro_0384 NC_009832.1 431324 432442 D PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: xfa:XF1743 esterase; alpha/beta hydrolase domain-containing protein 431324..432442 Serratia proteamaculans 568 5603130 YP_001476621.1 CDS Spro_0385 NC_009832.1 432434 433564 R KEGG: sco:SCO7479 integral membrane protein; hypothetical protein complement(432434..433564) Serratia proteamaculans 568 5603131 YP_001476622.1 CDS Spro_0386 NC_009832.1 433817 434737 D KEGG: psp:PSPPH_B0058 site-specific recombinase, phage integrase family; phage integrase family site specific recombinase 433817..434737 Serratia proteamaculans 568 5603132 YP_001476623.1 CDS Spro_0387 NC_009832.1 434715 435566 R PFAM: Integrase catalytic region; KEGG: psa:PST_1859 transposase, IS3 family; Integrase catalytic subunit complement(434715..435566) Serratia proteamaculans 568 5603115 YP_001476624.1 CDS Spro_0388 NC_009832.1 435587 435865 R PFAM: transposase IS3/IS911 family protein; KEGG: psa:PST_3402 ISxac3 transposase; transposase IS3/IS911 family protein complement(435587..435865) Serratia proteamaculans 568 5603116 YP_001476625.1 CDS Spro_0389 NC_009832.1 436410 437447 D hypothetical protein 436410..437447 Serratia proteamaculans 568 5603117 YP_001476626.1 CDS Spro_0390 NC_009832.1 438505 439392 D KEGG: plu:plu1152 hypothetical protein; hypothetical protein 438505..439392 Serratia proteamaculans 568 5602970 YP_001476627.1 CDS Spro_0391 NC_009832.1 439697 440668 D KEGG: sty:HCM2.0043 hypothetical protein; hypothetical protein 439697..440668 Serratia proteamaculans 568 5602971 YP_001476628.1 CDS Spro_0392 NC_009832.1 441073 441267 R hypothetical protein complement(441073..441267) Serratia proteamaculans 568 5602972 YP_001476629.1 CDS Spro_0393 NC_009832.1 442052 442411 D hypothetical protein 442052..442411 Serratia proteamaculans 568 5602938 YP_001476630.1 CDS Spro_0394 NC_009832.1 442525 443127 D KEGG: stt:t4289 hypothetical protein; hypothetical protein 442525..443127 Serratia proteamaculans 568 5602939 YP_001476631.1 CDS Spro_0395 NC_009832.1 443174 444208 D PFAM: domain of unknown function DUF1738; KEGG: yen:YE3460 hypothetical protein; hypothetical protein 443174..444208 Serratia proteamaculans 568 5602912 YP_001476632.1 CDS Spro_0396 NC_009832.1 444220 444483 D KEGG: yen:YE3459 hypothetical protein; hypothetical protein 444220..444483 Serratia proteamaculans 568 5602913 YP_001476633.1 CDS Spro_0397 NC_009832.1 444600 445523 D PFAM: protein of unknown function DUF1281; KEGG: ypi:YpsIP31758_3689 hypothetical protein; hypothetical protein 444600..445523 Serratia proteamaculans 568 5602914 YP_001476634.1 CDS Spro_0398 NC_009832.1 445792 446544 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ypi:YpsIP31758_2523 oxidoreductase, short chain dehydrogenase/reductase family protein; short-chain dehydrogenase/reductase SDR complement(445792..446544) Serratia proteamaculans 568 5602770 YP_001476635.1 CDS Spro_0399 NC_009832.1 446810 447493 D PFAM: regulatory protein LuxR; KEGG: asa:ASA_P5G023 hypothetical protein; LuxR family transcriptional regulator 446810..447493 Serratia proteamaculans 568 5602771 YP_001476636.1 CDS Spro_0400 NC_009832.1 448292 450004 D PFAM: protein of unknown function DUF1528; Relaxase; KEGG: eca:ECA0613 hypothetical protein; relaxase 448292..450004 Serratia proteamaculans 568 5602772 YP_001476637.1 CDS Spro_0401 NC_009832.1 450072 451085 D PFAM: integrase family protein; KEGG: plu:plu1166 hypothetical protein; integrase family protein 450072..451085 Serratia proteamaculans 568 5602765 YP_001476638.1 CDS Spro_0402 NC_009832.1 451519 452109 R PFAM: regulatory protein TetR; KEGG: ypk:y0598 hypothetical protein; putative transcriptional regulator complement(451519..452109) Serratia proteamaculans 568 5606591 YP_001476639.1 CDS dipZ NC_009832.1 452135 453820 R two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm; DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm; thiol:disulfide interchange protein complement(452135..453820) Serratia proteamaculans 568 5602767 YP_001476640.1 CDS Spro_0404 NC_009832.1 453817 454140 R copper binding protein required for copper tolerance; involved in resistance toward heavy metals; divalent-cation tolerance protein CutA complement(453817..454140) Serratia proteamaculans 568 5602737 YP_001476641.1 CDS Spro_0405 NC_009832.1 454263 455564 R functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to dcuB; anaerobic C4-dicarboxylate transporter complement(454263..455564) Serratia proteamaculans 568 5602738 YP_001476642.1 CDS aspA NC_009832.1 455690 457126 R catalyzes the formation of fumarate from aspartate; aspartate ammonia-lyase complement(455690..457126) Serratia proteamaculans 568 5602704 YP_001476643.1 CDS Spro_0407 NC_009832.1 457427 457963 D PFAM: FxsA cytoplasmic membrane protein; KEGG: yen:YE0352 hypothetical protein; FxsA cytoplasmic membrane protein 457427..457963 Serratia proteamaculans 568 5602705 YP_001476644.1 CDS groES NC_009832.1 458149 458442 D 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 458149..458442 Serratia proteamaculans 568 5602706 YP_001476645.1 CDS Spro_0409 NC_009832.1 458487 460133 D TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: stm:STM4330 chaperone Hsp60 with peptide-dependent ATPase activity, affects cell division; chaperonin GroEL 458487..460133 Serratia proteamaculans 568 5602689 YP_001476646.1 CDS Spro_0410 NC_009832.1 460376 460720 D KEGG: ypi:YpsIP31758_3674 hypothetical protein; hypothetical protein 460376..460720 Serratia proteamaculans 568 5602690 YP_001476647.1 CDS Spro_0411 NC_009832.1 460800 461828 R KEGG: yen:YE0356 hypothetical protein; TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein; lysine 2,3-aminomutase YodO family protein complement(460800..461828) Serratia proteamaculans 568 5602691 YP_001476648.1 CDS Spro_0412 NC_009832.1 461871 462437 D Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 461871..462437 Serratia proteamaculans 568 5602637 YP_001476649.1 CDS Spro_0413 NC_009832.1 462508 462636 D PFAM: Entericidin EcnAB; KEGG: sec:SC4214 putative entericidin A precursor; entericidin EcnAB 462508..462636 Serratia proteamaculans 568 5602638 YP_001476650.1 CDS Spro_0414 NC_009832.1 462759 462890 D PFAM: Entericidin EcnAB; KEGG: eca:ECA3975 entericidin B; entericidin EcnAB 462759..462890 Serratia proteamaculans 568 5602639 YP_001476651.1 CDS Spro_0415 NC_009832.1 463108 463434 D PFAM: small multidrug resistance protein; KEGG: stm:STM4338 putative DMT superfamily transport protein; small multidrug resistance protein 463108..463434 Serratia proteamaculans 568 5602591 YP_001476652.1 CDS Spro_0416 NC_009832.1 463478 463837 R in conjunction with FrdC acts to anchor the catalytic components of the fumarate reductase to the cytoplasmic membrane; fumarate reductase subunit D complement(463478..463837) Serratia proteamaculans 568 5602592 YP_001476653.1 CDS Spro_0417 NC_009832.1 463850 464242 R part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase subunit C complement(463850..464242) Serratia proteamaculans 568 5602593 YP_001476654.1 CDS Spro_0418 NC_009832.1 464258 464992 R part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase iron-sulfur subunit complement(464258..464992) Serratia proteamaculans 568 5602517 YP_001476655.1 CDS Spro_0419 NC_009832.1 464985 466781 R part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase flavoprotein subunit complement(464985..466781) Serratia proteamaculans 568 5602518 YP_001476656.1 CDS Spro_0420 NC_009832.1 467167 468144 D lysine--tRNA ligase beta chain; poxA; class II aminoacyl tRNA synthetase; catalyzes a two-step reaction; first charging a lysine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; lysyl-tRNA synthetase 467167..468144 Serratia proteamaculans 568 5602500 YP_001476657.1 CDS Spro_0421 NC_009832.1 468327 471674 R PFAM: MscS Mechanosensitive ion channel; KEGG: ypi:YpsIP31758_3664 mechanosensitive ion channel domain protein; hypothetical protein complement(468327..471674) Serratia proteamaculans 568 5602501 YP_001476658.1 CDS psd NC_009832.1 471688 472638 R catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine; phosphatidylserine decarboxylase complement(471688..472638) Serratia proteamaculans 568 5602502 YP_001476659.1 CDS Spro_0423 NC_009832.1 472660 473709 R EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; ribosome-associated GTPase complement(472660..473709) Serratia proteamaculans 568 5602464 YP_001476660.1 CDS Spro_0424 NC_009832.1 473893 474438 D 3'-5' exoribonuclease specific for small oligoribonuclotides; oligoribonuclease 473893..474438 Serratia proteamaculans 568 5602465 YP_001476661.1 CDS Spro_0425 NC_009832.1 475289 476428 R TIGRFAM: putative iron-sulfur cluster binding protein; PFAM: domain of unknown function DUF1730; KEGG: eca:ECA3940 putative 4Fe-4S binding protein; putative iron-sulfur cluster binding protein complement(475289..476428) Serratia proteamaculans 568 5606130 YP_001476662.1 CDS Spro_0426 NC_009832.1 476550 477938 D TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein; KEGG: yen:YE0372 hypothetical protein; hypothetical protein 476550..477938 Serratia proteamaculans 568 5606922 YP_001476663.1 CDS Spro_0427 NC_009832.1 477953 478423 D possibly involved in cell wall synthesis; putative ATPase 477953..478423 Serratia proteamaculans 568 5606923 YP_001476664.1 CDS Spro_0428 NC_009832.1 478431 480224 D PFAM: Peptidoglycan-binding LysM; cell wall hydrolase/autolysin; KEGG: yen:YE0374 putative N-acetylmuramoyl-L-alanine amidase-family protein; N-acetylmuramoyl-L-alanine amidase 478431..480224 Serratia proteamaculans 568 5606924 YP_001476665.1 CDS mutL NC_009832.1 480246 482120 D This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein 480246..482120 Serratia proteamaculans 568 5603683 YP_001476666.1 CDS miaA NC_009832.1 482113 483054 D IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 482113..483054 Serratia proteamaculans 568 5603684 YP_001476667.1 CDS hfq NC_009832.1 483169 483477 D Stimulates the elongation of poly(A) tails; RNA-binding protein Hfq 483169..483477 Serratia proteamaculans 568 5602862 YP_001476668.1 CDS Spro_0432 NC_009832.1 483573 484853 D involved in modulation of proteins HflK and HflC; part of the hflA locus (high frequency of lysogenization) which governs the lysis-lysogeny decision of bacteriophage lambda by controlling stability of the phage cII protein; putative GTPase HflX 483573..484853 Serratia proteamaculans 568 5602863 YP_001476669.1 CDS Spro_0433 NC_009832.1 484922 486181 D with HflC inhibits proteolysis of lambda cII protein by FtsH; FtsH protease regulator HflK 484922..486181 Serratia proteamaculans 568 5602864 YP_001476670.1 CDS Spro_0434 NC_009832.1 486185 487192 D with HflK inhibits proteolysis of lambda cII protein by FtsH; FtsH protease regulator HflC 486185..487192 Serratia proteamaculans 568 5605412 YP_001476671.1 CDS Spro_0435 NC_009832.1 487253 487456 D KEGG: ypi:YpsIP31758_3649 hypothetical protein; hypothetical protein 487253..487456 Serratia proteamaculans 568 5605413 YP_001476672.1 CDS Spro_0436 NC_009832.1 487554 488852 D catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 487554..488852 Serratia proteamaculans 568 5605414 YP_001476673.1 CDS Spro_0437 NC_009832.1 489086 489511 D negatively regulates the transcription of genes upregulated by nitrosative stress; transcriptional repressor NsrR 489086..489511 Serratia proteamaculans 568 5604675 YP_001476674.1 CDS Spro_0438 NC_009832.1 489571 492057 D 3'-5'exoribonuclease that acts nonspecifically on poly(A), poly(U) and ribosomal RNAs; exoribonuclease R 489571..492057 Serratia proteamaculans 568 5604676 YP_001476675.1 CDS Spro_0439 NC_009832.1 492117 492848 D Specifically methylates the ribose of guanosine 2251 in 23S rRNA; 23S rRNA (guanosine-2'-O-)-methyltransferase 492117..492848 Serratia proteamaculans 568 5604677 YP_001476676.1 CDS Spro_0440 NC_009832.1 492978 494612 D catalyzes the formation of 3-methylcrotonyl-CoA from isovaleryl-CoA; isovaleryl CoA dehydrogenase 492978..494612 Serratia proteamaculans 568 5603629 YP_001476677.1 CDS Spro_0441 NC_009832.1 494700 495098 D PFAM: protein of unknown function DUF350; KEGG: eca:ECA3620 hypothetical protein; hypothetical protein 494700..495098 Serratia proteamaculans 568 5603630 YP_001476678.1 CDS Spro_0442 NC_009832.1 495095 495370 R PFAM: protein of unknown function DUF1471; KEGG: ent:Ent638_0367 protein of unknown function DUF1471; hypothetical protein complement(495095..495370) Serratia proteamaculans 568 5603631 YP_001476679.1 CDS Spro_0443 NC_009832.1 495493 495801 R in Escherichia coli, mutation of this gene affects biofilm maturation, stress response, and motility; putative biofilm stress and motility protein A complement(495493..495801) Serratia proteamaculans 568 5603192 YP_001476680.1 CDS Spro_0444 NC_009832.1 495928 496680 D YjfP; esterase activity towards palmitoyl-CoA and pNP-butyrate in vitro; unknown function and substrate in vivo; esterase 495928..496680 Serratia proteamaculans 568 5603193 YP_001476681.1 CDS Spro_0445 NC_009832.1 496774 497040 R PFAM: protein of unknown function DUF1471; KEGG: yen:YE0389 hypothetical protein; hypothetical protein complement(496774..497040) Serratia proteamaculans 568 5603232 YP_001476682.1 CDS rpsF NC_009832.1 497498 497896 D binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 497498..497896 Serratia proteamaculans 568 5603233 YP_001476683.1 CDS Spro_0447 NC_009832.1 497903 498220 D binds single-stranded DNA at the primosome assembly site; primosomal replication protein N 497903..498220 Serratia proteamaculans 568 5603234 YP_001476684.1 CDS rpsR NC_009832.1 498225 498452 D binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 498225..498452 Serratia proteamaculans 568 5603243 YP_001476685.1 CDS rplI NC_009832.1 498492 498944 D in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 498492..498944 Serratia proteamaculans 568 5603244 YP_001476686.1 CDS Spro_0450 NC_009832.1 499055 499414 D PFAM: protein of unknown function DUF488; KEGG: yen:YE2509 hypothetical protein; hypothetical protein 499055..499414 Serratia proteamaculans 568 5603245 YP_001476687.1 CDS Spro_0451 NC_009832.1 499411 500085 R PFAM: Opacity-associated protein A; Opacity-associated protein A domain protein; KEGG: yen:YE0397 hypothetical protein; opacity-associated protein A complement(499411..500085) Serratia proteamaculans 568 5603246 YP_001476688.1 CDS Spro_0452 NC_009832.1 500372 500992 D FKBP-type; rotamase; catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; peptidyl-prolyl cis-trans isomerase 500372..500992 Serratia proteamaculans 568 5603247 YP_001476689.1 CDS cpdB NC_009832.1 501039 502991 R periplasmic enzyme; functions during ribonucleic acid degradation; 2',3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate; bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic protein complement(501039..502991) Serratia proteamaculans 568 5603248 YP_001476690.1 CDS Spro_0454 NC_009832.1 503245 503988 D catalyzes the formation of AMP from adenosine-3',5'-bisphosphate; adenosine-3'(2'),5'-bisphosphate nucleotidase 503245..503988 Serratia proteamaculans 568 5603249 YP_001476691.1 CDS Spro_0455 NC_009832.1 503990 504547 R PFAM: conserved hypothetical protein; KEGG: yen:YE0401 hypothetical protein; hypothetical protein complement(503990..504547) Serratia proteamaculans 568 5603250 YP_001476692.1 CDS Spro_0456 NC_009832.1 504874 505080 D PFAM: protein of unknown function DUF1107; KEGG: ent:Ent638_0395 protein of unknown function DUF1107; hypothetical protein 504874..505080 Serratia proteamaculans 568 5603251 YP_001476693.1 CDS Spro_0457 NC_009832.1 505347 506690 R PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: ypi:YpsIP31758_3627 CBS/transporter associated domain protein; hypothetical protein complement(505347..506690) Serratia proteamaculans 568 5603267 YP_001476694.1 CDS Spro_0458 NC_009832.1 506868 507509 R this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A complement(506868..507509) Serratia proteamaculans 568 5603268 YP_001476695.1 CDS Spro_0459 NC_009832.1 507797 509533 D PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: ypi:YpsIP31758_3625 surface antigen/outer membrane protein, OMP85 family; surface antigen (D15) 507797..509533 Serratia proteamaculans 568 5603413 YP_001476696.1 CDS Spro_0460 NC_009832.1 509578 513348 D PFAM: protein of unknown function DUF490; KEGG: yen:YE0406 hypothetical protein; hypothetical protein 509578..513348 Serratia proteamaculans 568 5603414 YP_001476697.1 CDS Spro_0461 NC_009832.1 513405 513698 D PFAM: AIG2 family protein; KEGG: yen:YE0407 hypothetical protein; AIG2 family protein 513405..513698 Serratia proteamaculans 568 5603415 YP_001476698.1 CDS Spro_0462 NC_009832.1 513750 514280 R catalyzes the hydrolysis of pyrophosphate to phosphate; inorganic pyrophosphatase complement(513750..514280) Serratia proteamaculans 568 5603422 YP_001476699.1 CDS Spro_0463 NC_009832.1 514537 516090 D PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: yen:YE0409 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 514537..516090 Serratia proteamaculans 568 5603423 YP_001476700.1 CDS Spro_0464 NC_009832.1 516128 517132 R catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase complement(516128..517132) Serratia proteamaculans 568 5603424 YP_001476701.1 CDS Spro_0465 NC_009832.1 517301 518680 D TIGRFAM: UDP-N-acetylmuramate; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: yps:YPTB0457 UDP-N-acetylmuramate:L-Ala-D-Glu-meso- diaminopime late ligase; UDP-N-acetylmuramate 517301..518680 Serratia proteamaculans 568 5603428 YP_001476702.1 CDS Spro_0466 NC_009832.1 519049 519312 R PFAM: protein of unknown function DUF1471; KEGG: yen:YE0412 hypothetical protein; hypothetical protein complement(519049..519312) Serratia proteamaculans 568 5603429 YP_001476703.1 CDS Spro_0467 NC_009832.1 519436 519699 R PFAM: protein of unknown function DUF1471; KEGG: yen:YE0412 hypothetical protein; hypothetical protein complement(519436..519699) Serratia proteamaculans 568 5603430 YP_001476704.1 CDS Spro_0468 NC_009832.1 520105 520575 R regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes; arginine repressor complement(520105..520575) Serratia proteamaculans 568 5603479 YP_001476705.1 CDS Spro_0469 NC_009832.1 521042 521980 D oxidizes malate to oxaloacetate; malate dehydrogenase 521042..521980 Serratia proteamaculans 568 5603480 YP_001476706.1 CDS Spro_0470 NC_009832.1 522049 522309 R KEGG: ypi:YpsIP31758_3615 sugar fermentation stimulation protein B; putative transcriptional regulator Nlp complement(522049..522309) Serratia proteamaculans 568 5603481 YP_001476707.1 CDS Spro_0471 NC_009832.1 522570 522842 D KEGG: ypi:YpsIP31758_3614 hypothetical protein; hypothetical protein 522570..522842 Serratia proteamaculans 568 5603503 YP_001476708.1 CDS Spro_0472 NC_009832.1 522892 523863 R PFAM: Polyprenyl synthetase; KEGG: eca:ECA0689 octaprenyl-diphosphate synthase; octaprenyl diphosphate synthase complement(522892..523863) Serratia proteamaculans 568 5603504 YP_001476709.1 CDS rplU NC_009832.1 524133 524444 D PFAM: ribosomal protein L21; KEGG: eca:ECA0690 50S ribosomal protein L21; 50S ribosomal protein L21 524133..524444 Serratia proteamaculans 568 5607336 YP_001476710.1 CDS rpmA NC_009832.1 524462 524719 D involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 524462..524719 Serratia proteamaculans 568 5607337 YP_001476711.1 CDS Spro_0475 NC_009832.1 524792 525796 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: ypi:YpsIP31758_3610 integral membrane protein; hypothetical protein 524792..525796 Serratia proteamaculans 568 5607338 YP_001476712.1 CDS obgE NC_009832.1 525813 526985 D essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 525813..526985 Serratia proteamaculans 568 5607298 YP_001476713.1 CDS Spro_0477 NC_009832.1 527026 528087 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: yen:YE0422 two-component system sensor protein; sensor protein BasS/PmrB complement(527026..528087) Serratia proteamaculans 568 5607299 YP_001476714.1 CDS Spro_0478 NC_009832.1 528084 528746 R response regulator in two-component regulatory system with BasS; DNA-binding transcriptional regulator BasR complement(528084..528746) Serratia proteamaculans 568 5607300 YP_001476715.1 CDS Spro_0479 NC_009832.1 528755 530188 R penicillin binding protein 4; penicillin sensitive; catalyzes the formation of D-alanine from D-alanyl-D-alanine; one of four, DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains; D-alanyl-D-alanine carboxypeptidase/endopeptidase complement(528755..530188) Serratia proteamaculans 568 5604772 YP_001476716.1 CDS Spro_0480 NC_009832.1 530445 530921 D TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: yen:YE0425 transcription elongation factor; transcription elongation factor GreA 530445..530921 Serratia proteamaculans 568 5604773 YP_001476717.1 CDS Spro_0481 NC_009832.1 531036 531329 R PFAM: protein of unknown function UPF0044; KEGG: stm:STM3298.S putative RNA-binding protein; hypothetical protein complement(531036..531329) Serratia proteamaculans 568 5604774 YP_001476718.1 CDS rrmJ NC_009832.1 531474 532103 D Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit; 23S rRNA methyltransferase J 531474..532103 Serratia proteamaculans 568 5606237 YP_001476719.1 CDS hflB NC_009832.1 532160 534091 D inner membrane metalloprotease; may be involved in degradation of aberrant cytoplasmic and membrane proteins; ATP-dependent metalloprotease 532160..534091 Serratia proteamaculans 568 5606238 YP_001476720.1 CDS folP NC_009832.1 534184 535017 D catalyzes the formation of dihydropteroate from 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine diphosphate and 4-aminobenzoate; dihydropteroate synthase 534184..535017 Serratia proteamaculans 568 5606239 YP_001476721.1 CDS glmM NC_009832.1 535025 536362 D catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 535025..536362 Serratia proteamaculans 568 5603446 YP_001476722.1 CDS secG NC_009832.1 536614 536949 D TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: yen:YE0431 protein-export membrane protein; preprotein translocase subunit SecG 536614..536949 Serratia proteamaculans 568 5603447 YP_001476723.2 CDS Spro_0487 NC_009832.1 537469 537921 D in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein 537469..537921 Serratia proteamaculans 568 5605711 YP_001476724.1 CDS nusA NC_009832.1 537943 539451 D modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 537943..539451 Serratia proteamaculans 568 5603837 YP_001476725.1 CDS infB NC_009832.1 539476 542163 D Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 539476..542163 Serratia proteamaculans 568 5603838 YP_001476726.1 CDS rbfA NC_009832.1 542232 542642 D associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 542232..542642 Serratia proteamaculans 568 5606536 YP_001476727.1 CDS truB NC_009832.1 542642 543586 D catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 542642..543586 Serratia proteamaculans 568 5606537 YP_001476728.1 CDS rpsO NC_009832.1 543710 543979 D primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 543710..543979 Serratia proteamaculans 568 5606538 YP_001476729.1 CDS Spro_0493 NC_009832.1 544235 546352 D KEGG: yen:YE0438 polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH type 1 domain protein; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; SMART: KH domain protein; polynucleotide phosphorylase/polyadenylase 544235..546352 Serratia proteamaculans 568 5607233 YP_001476730.1 CDS Spro_0494 NC_009832.1 546481 547365 D lipoprotein that appears to be involved in cell division; interacts with the periplasmic protease Prc and may be activated by protease processing; lipoprotein NlpI 546481..547365 Serratia proteamaculans 568 5607234 YP_001476731.1 CDS Spro_0495 NC_009832.1 547552 549513 D participates in the assembly of the large subunit of the ribosome; plays a key role in optimal cell growth at low temperature and is required for normal cell division; ATP-dependent RNA helicase DeaD 547552..549513 Serratia proteamaculans 568 5607235 YP_001476732.1 CDS Spro_0496 NC_009832.1 549660 550874 D PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: ypi:YpsIP31758_3810 YeeE/YedE family protein; hypothetical protein 549660..550874 Serratia proteamaculans 568 5607213 YP_001476733.1 CDS Spro_0497 NC_009832.1 550871 551110 D PFAM: SirA family protein; KEGG: net:Neut_1003 SirA family protein; hypothetical protein 550871..551110 Serratia proteamaculans 568 5607214 YP_001476734.1 CDS Spro_0498 NC_009832.1 551145 552170 R PFAM: luciferase family protein; KEGG: yen:YE0442 hypothetical protein; hypothetical protein complement(551145..552170) Serratia proteamaculans 568 5607215 YP_001476735.1 CDS Spro_0499 NC_009832.1 552383 553354 D PFAM: secretion protein HlyD family protein; KEGG: plu:plu4516 unnamed protein product; highly similar to membrane fusion protein (MFP) of ABC transport system; secretion protein HlyD family protein 552383..553354 Serratia proteamaculans 568 5607136 YP_001476736.1 CDS Spro_0500 NC_009832.1 553336 554490 D PFAM: ABC-2 type transporter; KEGG: plu:plu4515 unnamed protein product; similar to permease protein of ABC transport system; ABC-2 type transporter 553336..554490 Serratia proteamaculans 568 5607137 YP_001476737.1 CDS Spro_0501 NC_009832.1 554487 555626 D PFAM: ABC-2 type transporter; KEGG: plu:plu4514 unnamed protein product; similar to permease protein of ABC transport system; ABC-2 type transporter 554487..555626 Serratia proteamaculans 568 5607080 YP_001476738.1 CDS Spro_0502 NC_009832.1 555728 556849 D PFAM: Cupin 4 family protein; SMART: transcription factor jumonji jmjC domain protein; KEGG: ent:Ent638_0491 cupin 4 family protein; cupin 4 family protein 555728..556849 Serratia proteamaculans 568 5607081 YP_001476739.1 CDS Spro_0503 NC_009832.1 556936 557814 R PFAM: peptidase U32; KEGG: yen:YE0449 hypothetical protein; peptidase U32 complement(556936..557814) Serratia proteamaculans 568 5607082 YP_001476740.1 CDS Spro_0504 NC_009832.1 557826 558821 R PFAM: peptidase U32; KEGG: ent:Ent638_3595 peptidase U32; peptidase U32 complement(557826..558821) Serratia proteamaculans 568 5607044 YP_001476741.1 CDS Spro_0505 NC_009832.1 559043 559564 D PFAM: Sterol-binding domain protein; KEGG: yen:YE0451 putative lipid carrier protein; sterol-binding domain-containing protein 559043..559564 Serratia proteamaculans 568 5607045 YP_001476742.1 CDS Spro_0506 NC_009832.1 559558 560061 D PFAM: GCN5-related N-acetyltransferase; KEGG: yen:YE0452 putative acetyltransferase; GCN5-like N-acetyltransferase 559558..560061 Serratia proteamaculans 568 5607046 YP_001476743.1 CDS Spro_0507 NC_009832.1 560048 560401 R PFAM: Excinuclease ABC C subunit domain protein; KEGG: yen:YE0453 hypothetical protein; excinuclease ABC subunit C complement(560048..560401) Serratia proteamaculans 568 5607036 YP_001476744.1 CDS potE NC_009832.1 560448 561770 R catalyzes the uptake of putrescine via a proton symport mechanism, as well as the efflux of putrescine by a putrescine/ornithine antiport system; putrescine transporter complement(560448..561770) Serratia proteamaculans 568 5607037 YP_001476745.1 CDS Spro_0509 NC_009832.1 561828 563999 R PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: yen:YE0455 ornithine decarboxylase, inducible; ornithine decarboxylase complement(561828..563999) Serratia proteamaculans 568 5607038 YP_001476746.1 CDS Spro_0510 NC_009832.1 564804 565238 D KEGG: ypp:YPDSF_3277 hypothetical protein; hypothetical protein 564804..565238 Serratia proteamaculans 568 5607023 YP_001476747.1 CDS Spro_0511 NC_009832.1 565484 566122 D KEGG: ypi:YpsIP31758_3569 hypothetical protein; hypothetical protein 565484..566122 Serratia proteamaculans 568 5607024 YP_001476748.1 CDS phnP NC_009832.1 566073 566855 R required for the use of phosphonates and phosphite as phosphorus sources; carbon-phosphorus lyase complex accessory protein complement(566073..566855) Serratia proteamaculans 568 5607025 YP_001476749.1 CDS Spro_0513 NC_009832.1 566870 567472 R KEGG: rpe:RPE_3116 putative acetyltransferase (virginiamycin, streptogramin A, chloramphenicol); putative acetyltransferase complement(566870..567472) Serratia proteamaculans 568 5607004 YP_001476750.1 CDS Spro_0514 NC_009832.1 567469 568038 R TIGRFAM: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; SMART: guanylate kinase/L-type calcium channel region; KEGG: ypi:YpsIP31758_3567 putative phosphonate metabolism ribose 1,5-bisphosphokinase PhnN; ribose 1,5-bisphosphokinase complement(567469..568038) Serratia proteamaculans 568 5607005 YP_001476751.1 CDS Spro_0515 NC_009832.1 568038 569174 R TIGRFAM: phosphonate metabolism protein PhnM; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: ypn:YPN_0624 PhnM protein; phosphonate metabolism protein PhnM complement(568038..569174) Serratia proteamaculans 568 5607001 YP_001476752.1 CDS Spro_0516 NC_009832.1 569174 569878 R KEGG: ypp:YPDSF_3272 phosphonates transport ATP-binding protein; TIGRFAM: phosphonate C-P lyase system protein PhnL; PFAM: ABC transporter related; SMART: AAA ATPase; phosphonate C-P lyase system protein PhnL complement(569174..569878) Serratia proteamaculans 568 5607002 YP_001476753.1 CDS phnK NC_009832.1 569895 570683 R KEGG: yen:YE0473 phosphonates transport ATP-binding protein; TIGRFAM: phosphonate C-P lyase system protein PhnK; PFAM: ABC transporter related; SMART: AAA ATPase; phosphonate C-P lyase system protein PhnK complement(569895..570683) Serratia proteamaculans 568 5607003 YP_001476754.1 CDS Spro_0518 NC_009832.1 570683 571543 R PFAM: phosphonate metabolism PhnJ; KEGG: ypi:YpsIP31758_3563 phosphonate metabolism protein PhnJ; phosphonate metabolism protein PhnJ complement(570683..571543) Serratia proteamaculans 568 5606998 YP_001476755.1 CDS Spro_0519 NC_009832.1 571536 572621 R PFAM: phosphonate metabolism; KEGG: ypi:YpsIP31758_3562 phosphonate metabolism protein PhnI; phosphonate metabolism protein PhnI complement(571536..572621) Serratia proteamaculans 568 5606999 YP_001476756.1 CDS phnH NC_009832.1 572621 573202 R PFAM: phosphonate metabolism; KEGG: yen:YE0476 PhnH protein; carbon-phosphorus lyase complex subunit complement(572621..573202) Serratia proteamaculans 568 5607000 YP_001476757.1 CDS Spro_0521 NC_009832.1 573206 573649 R PFAM: phosphonate metabolism PhnG; KEGG: yen:YE0477 PhnG protein; phosphonate metabolism protein PhnG complement(573206..573649) Serratia proteamaculans 568 5606286 YP_001476758.1 CDS Spro_0522 NC_009832.1 573650 574378 R may be involved in phosphonate uptake and biodegradation; phosphonate metabolism transcriptional regulator PhnF complement(573650..574378) Serratia proteamaculans 568 5606287 YP_001476759.1 CDS Spro_0523 NC_009832.1 574538 575659 D PFAM: permease; KEGG: ssn:SSON_3297 hypothetical protein; permease 574538..575659 Serratia proteamaculans 568 5606288 YP_001476760.1 CDS nrdG NC_009832.1 575731 576195 R activates anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions; anaerobic ribonucleotide reductase-activating protein complement(575731..576195) Serratia proteamaculans 568 5606947 YP_001476761.1 CDS Spro_0525 NC_009832.1 576256 578394 R Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase complement(576256..578394) Serratia proteamaculans 568 5606948 YP_001476762.1 CDS Spro_0526 NC_009832.1 578667 579575 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: yen:YE0483 putative LysR-family transcriptional regulatory protein; LysR family transcriptional regulator complement(578667..579575) Serratia proteamaculans 568 5606949 YP_001476763.1 CDS Spro_0527 NC_009832.1 579680 580204 D PFAM: NAD(P)H dehydrogenase (quinone); KEGG: yen:YE0484 putative oxidoreductase; NAD(P)H dehydrogenase (quinone) 579680..580204 Serratia proteamaculans 568 5606914 YP_001476764.1 CDS Spro_0528 NC_009832.1 580232 581896 R KEGG: yen:YE3773 putative trehalose-6-phosphate hydrolase; TIGRFAM: alpha,alpha-phosphotrehalase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; trehalose-6-phosphate hydrolase complement(580232..581896) Serratia proteamaculans 568 5606915 YP_001476765.1 CDS Spro_0529 NC_009832.1 581942 583357 R phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system trehalose(maltose)-specific transporter subunits IIBC complement(581942..583357) Serratia proteamaculans 568 5606893 YP_001476766.1 CDS Spro_0530 NC_009832.1 583679 584092 D KEGG: ssn:SSON_PB07 entry exclusion protein 2; entry exclusion protein 2 583679..584092 Serratia proteamaculans 568 5606894 YP_001476767.1 CDS Spro_0531 NC_009832.1 584203 584460 R PFAM: Colicin D; KEGG: ypm:YP_3568 putative colicin immunity protein; colicin D complement(584203..584460) Serratia proteamaculans 568 5606895 YP_001476768.1 CDS Spro_0532 NC_009832.1 584466 586424 R PFAM: S-type Pyocin domain protein; KEGG: pap:PSPA7_3037 killer protein of pyocin S3; S-type pyocin domain-containing protein complement(584466..586424) Serratia proteamaculans 568 5606884 YP_001476769.1 CDS Spro_0533 NC_009832.1 586523 587659 R KEGG: sgl:SG1235 hypothetical protein; hypothetical protein complement(586523..587659) Serratia proteamaculans 568 5606885 YP_001476770.1 CDS treR NC_009832.1 587957 588904 R regulates genes involved in trehalose metabolism; binds the intermediate trehalose-6-phosphate; binds a dimer; regulates treBC operon; trehalose repressor complement(587957..588904) Serratia proteamaculans 568 5606886 YP_001476771.1 CDS Spro_0535 NC_009832.1 589380 592088 D P-type ATPase involved in magnesium influx; magnesium-transporting ATPase MgtA 589380..592088 Serratia proteamaculans 568 5606869 YP_001476772.1 CDS Spro_0536 NC_009832.1 592234 594627 D PFAM: Beta-N-acetylhexosaminidase-like; Glycoside hydrolase, family 20, catalytic core; KEGG: ent:Ent638_0442 beta-N-acetylhexosaminidase; beta-N-acetylhexosaminidase 592234..594627 Serratia proteamaculans 568 5606870 YP_001476773.1 CDS Spro_0537 NC_009832.1 594688 595416 R PFAM: 20S proteasome A and B subunits; KEGG: yen:YE3772 hypothetical protein; 20S proteasome subunits A and B complement(594688..595416) Serratia proteamaculans 568 5606871 YP_001476774.1 CDS Spro_0538 NC_009832.1 595492 596286 R PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: yen:YE3771 hypothetical protein; transglutaminase domain-containing protein complement(595492..596286) Serratia proteamaculans 568 5606852 YP_001476775.1 CDS Spro_0539 NC_009832.1 596283 597212 R PFAM: protein of unknown function DUF403; KEGG: yen:YE3770 hypothetical protein; hypothetical protein complement(596283..597212) Serratia proteamaculans 568 5606853 YP_001476776.1 CDS Spro_0540 NC_009832.1 597206 598684 R PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: yen:YE3769 hypothetical protein; hypothetical protein complement(597206..598684) Serratia proteamaculans 568 5606854 YP_001476777.1 CDS Spro_0543 NC_009832.1 602093 602479 R TIGRFAM: putative endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: yen:YE3768 hypothetical protein; putative endoribonuclease L-PSP complement(602093..602479) Serratia proteamaculans 568 5606840 YP_001476778.1 CDS Spro_0544 NC_009832.1 602578 603042 R involved in the allosteric regulation of aspartate carbamoyltransferase; aspartate carbamoyltransferase regulatory subunit complement(602578..603042) Serratia proteamaculans 568 5606810 YP_001476779.1 CDS pyrB NC_009832.1 603055 603990 R catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit complement(603055..603990) Serratia proteamaculans 568 5606811 YP_001476780.1 CDS Spro_0546 NC_009832.1 604294 605298 R PFAM: transport system permease protein; KEGG: eca:ECA4256 putative iron(III) ABC transporter permease protein; transport system permease complement(604294..605298) Serratia proteamaculans 568 5606812 YP_001476781.1 CDS Spro_0547 NC_009832.1 605298 606254 R PFAM: periplasmic binding protein; KEGG: eca:ECA4255 putative iron(III) ABC transporter, periplasmic-binding protein; periplasmic binding protein complement(605298..606254) Serratia proteamaculans 568 5606789 YP_001476782.1 CDS Spro_0548 NC_009832.1 606376 607173 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA4254 putative iron(III) ABC transporter ATP-binding protein; ABC transporter-like protein complement(606376..607173) Serratia proteamaculans 568 5606790 YP_001476783.1 CDS Spro_0549 NC_009832.1 607193 608434 R KEGG: kpn:KPN_04792 hypothetical protein; hypothetical protein complement(607193..608434) Serratia proteamaculans 568 5606791 YP_001476784.1 CDS Spro_0550 NC_009832.1 608628 609491 D PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: kpn:KPN_04798 putative transcriptional regulator (N-terminal); putative sugar-binding domain of regulator protein (C-terminal); RpiR family transcriptional regulator 608628..609491 Serratia proteamaculans 568 5606761 YP_001476785.1 CDS Spro_0551 NC_009832.1 609529 610968 D PFAM: amidohydrolase; D-aminoacylase domain protein; Amidohydrolase 3; KEGG: kpn:KPN_04793 hypothetical protein; N-acyl-D-amino-acid deacylase 609529..610968 Serratia proteamaculans 568 5606762 YP_001476786.1 CDS Spro_0552 NC_009832.1 610986 611384 D PFAM: Endoribonuclease L-PSP; KEGG: kpn:KPN_04794 hypothetical protein; endoribonuclease L-PSP 610986..611384 Serratia proteamaculans 568 5606763 YP_001476787.1 CDS Spro_0553 NC_009832.1 611437 613005 R PFAM: extracellular solute-binding protein family 5; KEGG: yen:YE0491 ABC transporter, substrate binding protein; extracellular solute-binding protein complement(611437..613005) Serratia proteamaculans 568 5606731 YP_001476788.1 CDS Spro_0554 NC_009832.1 613267 614286 R TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; KEGG: yen:YE0494 ornithine carbamoyltransferase chain I; ornithine carbamoyltransferase complement(613267..614286) Serratia proteamaculans 568 5606732 YP_001476789.1 CDS Spro_0555 NC_009832.1 614450 614878 D PFAM: protein of unknown function DUF1260; KEGG: yen:YE0495 hypothetical protein; hypothetical protein 614450..614878 Serratia proteamaculans 568 5606733 YP_001476790.1 CDS Spro_0556 NC_009832.1 614934 615698 D PFAM: tRNA--hydroxylase; KEGG: ent:Ent638_0461 tRNA--hydroxylase; tRNA--hydroxylase 614934..615698 Serratia proteamaculans 568 5606728 YP_001476791.1 CDS Spro_0557 NC_009832.1 615720 617327 R PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: bte:BTH_II0331 GMC oxidoreductase; glucose-methanol-choline oxidoreductase complement(615720..617327) Serratia proteamaculans 568 5606729 YP_001476792.1 CDS Spro_0558 NC_009832.1 617680 618687 D PFAM: acyltransferase 3; KEGG: apl:APL_1465 hypothetical protein; acyltransferase 3 617680..618687 Serratia proteamaculans 568 5606714 YP_001476793.1 CDS Spro_0559 NC_009832.1 618845 619378 R PFAM: GCN5-related N-acetyltransferase; KEGG: ypp:YPDSF_3254 acetyltransferase; GCN5-like N-acetyltransferase complement(618845..619378) Serratia proteamaculans 568 5606715 YP_001476794.1 CDS valS NC_009832.1 619545 622421 R valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase complement(619545..622421) Serratia proteamaculans 568 5606716 YP_001476795.1 CDS Spro_0561 NC_009832.1 622435 622884 R binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB; DNA polymerase III subunit chi complement(622435..622884) Serratia proteamaculans 568 5606705 YP_001476796.1 CDS Spro_0562 NC_009832.1 622969 624480 R catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase complement(622969..624480) Serratia proteamaculans 568 5606706 YP_001476797.1 CDS Spro_0563 NC_009832.1 624761 625855 D PFAM: permease YjgP/YjgQ family protein; KEGG: ypi:YpsIP31758_3542 putative permease; permease YjgP/YjgQ family protein 624761..625855 Serratia proteamaculans 568 5606707 YP_001476798.1 CDS Spro_0564 NC_009832.1 625855 626925 D PFAM: permease YjgP/YjgQ family protein; KEGG: yen:YE0502 hypothetical protein; permease YjgP/YjgQ family protein 625855..626925 Serratia proteamaculans 568 5606680 YP_001476799.1 CDS Spro_0565 NC_009832.1 627797 628873 D PFAM: filamentation induced by cAMP protein Fic; KEGG: shn:Shewana3_2962 filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein Fic 627797..628873 Serratia proteamaculans 568 5607204 YP_001476800.1 CDS Spro_0566 NC_009832.1 629129 629764 D PFAM: carbonic anhydrase; KEGG: kpn:KPN_02014 putative carbonic anhydrase; carbonate dehydratase 629129..629764 Serratia proteamaculans 568 5606682 YP_001476801.1 CDS Spro_0567 NC_009832.1 629991 630239 D PFAM: helix-turn-helix domain protein; KEGG: ent:Ent638_2034 putative transcriptional regulator, XRE family; XRE family transcriptional regulator 629991..630239 Serratia proteamaculans 568 5606651 YP_001476802.1 CDS Spro_0568 NC_009832.1 630242 630592 D KEGG: kpn:KPN_04693 hypothetical protein; hypothetical protein 630242..630592 Serratia proteamaculans 568 5606652 YP_001476803.1 CDS Spro_0569 NC_009832.1 630641 631708 R response regulator receiver protein complement(630641..631708) Serratia proteamaculans 568 5606653 YP_001476804.1 CDS Spro_0570 NC_009832.1 631710 633872 R PFAM: ATP-binding region ATPase domain protein; KEGG: azo:azo0358 putative two-component sensor kinase; ATPase domain-containing protein complement(631710..633872) Serratia proteamaculans 568 5606643 YP_001476805.1 CDS Spro_0571 NC_009832.1 634208 635422 R PFAM: Restriction endonuclease EcoRII; KEGG: acr:Acry_3581 hypothetical protein; Type II site-specific deoxyribonuclease complement(634208..635422) Serratia proteamaculans 568 5606644 YP_001476806.1 CDS Spro_0572 NC_009832.1 635584 636057 R PFAM: DNA mismatch endonuclease vsr; KEGG: plu:plu0339 very short patch repair protein (DNA mismatch endonuclease) (Vsr mismatch endonuclease) (V.EcoKDcm); DNA mismatch endonuclease vsr complement(635584..636057) Serratia proteamaculans 568 5606640 YP_001476807.1 CDS Spro_0573 NC_009832.1 636066 637541 R KEGG: plu:plu0338 DNA-cytosine methyltransferase; TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; DNA cytosine methylase complement(636066..637541) Serratia proteamaculans 568 5606641 YP_001476808.1 CDS Spro_0574 NC_009832.1 637675 638016 R KEGG: eca:ECA0128 hypothetical protein; hypothetical protein complement(637675..638016) Serratia proteamaculans 568 5606642 YP_001476809.1 CDS Spro_0575 NC_009832.1 638360 639790 R PFAM: glycoside hydrolase family 1; KEGG: sdy:SDY_2912 6-phospho-beta-glucosidase; cryptic 6-phospho-beta-glucosidase complement(638360..639790) Serratia proteamaculans 568 5606637 YP_001476810.1 CDS Spro_0576 NC_009832.1 639807 641249 R phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system cellobiose/arbutin/salicin-specific transporter subunits IIBC complement(639807..641249) Serratia proteamaculans 568 5606638 YP_001476811.1 CDS Spro_0577 NC_009832.1 641536 642570 D PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: ent:Ent638_3187 regulatory protein, LacI; LacI family transcription regulator 641536..642570 Serratia proteamaculans 568 5606639 YP_001476812.1 CDS Spro_0578 NC_009832.1 642567 643334 R PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: mmw:Mmwyl1_0262 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(642567..643334) Serratia proteamaculans 568 5606574 YP_001476813.1 CDS Spro_0579 NC_009832.1 643439 644626 D TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: mmw:Mmwyl1_0263 drug resistance transporter, Bcr/CflA subfamily; Bcr/CflA subfamily drug resistance transporter 643439..644626 Serratia proteamaculans 568 5606575 YP_001476814.1 CDS Spro_0580 NC_009832.1 644582 645544 R PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: eca:ECA1189 hypothetical protein; putative GTP-binding protein YjiA complement(644582..645544) Serratia proteamaculans 568 5606576 YP_001476815.1 CDS Spro_0581 NC_009832.1 645557 645760 R PFAM: protein of unknown function DUF466; KEGG: eca:ECA1188 hypothetical protein; hypothetical protein complement(645557..645760) Serratia proteamaculans 568 5606569 YP_001476816.1 CDS Spro_0582 NC_009832.1 645827 648007 R PFAM: carbon starvation protein CstA; KEGG: eca:ECA1187 putative carbon starvation protein; carbon starvation protein CstA complement(645827..648007) Serratia proteamaculans 568 5606570 YP_001476817.1 CDS Spro_0583 NC_009832.1 648308 648955 R PFAM: glycosyl transferase family 20; KEGG: pol:Bpro_3918 alpha,alpha-trehalose-phosphate synthase; glycosyl transferase family protein complement(648308..648955) Serratia proteamaculans 568 5606571 YP_001476818.1 CDS Spro_0584 NC_009832.1 649019 650416 R PFAM: glutamine synthetase catalytic region; KEGG: kpn:KPN_01021 putative glutamine synthetase; glutamine synthetase catalytic region complement(649019..650416) Serratia proteamaculans 568 5606542 YP_001476819.1 CDS Spro_0585 NC_009832.1 650587 650922 D KEGG: pap:PSPA7_2489 hypothetical protein; hypothetical protein 650587..650922 Serratia proteamaculans 568 5606543 YP_001476820.1 CDS Spro_0586 NC_009832.1 651091 652167 R KEGG: kpn:KPN_01908 putative receptor; putative receptor complement(651091..652167) Serratia proteamaculans 568 5606004 YP_001476821.1 CDS Spro_0587 NC_009832.1 652513 652908 R hypothetical protein complement(652513..652908) Serratia proteamaculans 568 5606005 YP_001476822.1 CDS Spro_0588 NC_009832.1 653275 653700 R KEGG: stt:t4360 hypothetical protein; hypothetical protein complement(653275..653700) Serratia proteamaculans 568 5606006 YP_001476823.1 CDS Spro_0589 NC_009832.1 653756 654649 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: kpn:KPN_02052 putative transcriptional regulator (LysR family); LysR family transcriptional regulator complement(653756..654649) Serratia proteamaculans 568 5606464 YP_001476824.1 CDS Spro_0590 NC_009832.1 654825 655523 D KEGG: pap:PSPA7_3295 probable CoA transferase, subunit A; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit A 654825..655523 Serratia proteamaculans 568 5606465 YP_001476825.1 CDS Spro_0591 NC_009832.1 655534 656187 D KEGG: pap:PSPA7_3294 probable CoA transferase, subunit B; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit B 655534..656187 Serratia proteamaculans 568 5606466 YP_001476826.1 CDS Spro_0592 NC_009832.1 656187 657392 D KEGG: ppu:PP_4636 beta-ketothiolase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase 656187..657392 Serratia proteamaculans 568 5606455 YP_001476827.1 CDS Spro_0593 NC_009832.1 657409 658332 D PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: kpn:KPN_02056 3-hydroxybutyryl-CoA dehydrogenase; NAD-binding 3-hydroxyacyl-CoA dehydrogenase 657409..658332 Serratia proteamaculans 568 5606456 YP_001476828.1 CDS Spro_0594 NC_009832.1 658408 659799 D PFAM: Citrate transporter; KEGG: pfl:PFL_3575 hypothetical protein; citrate transporter 658408..659799 Serratia proteamaculans 568 5606457 YP_001476829.1 CDS Spro_0595 NC_009832.1 659812 660582 D catalyzes the formation of acetoacetate from 3-hydroxybutyrate; 3-hydroxybutyrate dehydrogenase 659812..660582 Serratia proteamaculans 568 5606142 YP_001476830.1 CDS Spro_0596 NC_009832.1 660603 661457 R PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mmw:Mmwyl1_3814 helix-turn-helix-domain containing protein AraC type; AraC family transcriptional regulator complement(660603..661457) Serratia proteamaculans 568 5606143 YP_001476831.1 CDS Spro_0597 NC_009832.1 661544 662422 D PFAM: helix-turn-helix- domain containing protein AraC type; transcription activator effector binding; KEGG: yen:YE0593 putative right origin-binding protein; AraC family transcriptional regulator 661544..662422 Serratia proteamaculans 568 5606144 YP_001476832.1 CDS Spro_0598 NC_009832.1 662589 663509 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: sgl:SG1042 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 662589..663509 Serratia proteamaculans 568 5602915 YP_001476833.1 CDS Spro_0599 NC_009832.1 663927 664883 D PFAM: putative transposase YhgA family protein; KEGG: stm:PSLT051 putative cytoplasmic protein; putative transposase YhgA family protein 663927..664883 Serratia proteamaculans 568 5602916 YP_001476834.1 CDS Spro_0600 NC_009832.1 665181 665588 D PFAM: Biopolymer transport protein ExbD/TolR; KEGG: eca:ECA0929 biopolymer transport protein; biopolymer transport protein ExbD/TolR 665181..665588 Serratia proteamaculans 568 5606345 YP_001476835.1 CDS Spro_0601 NC_009832.1 665590 666336 D TIGRFAM: TonB family protein; KEGG: eca:ECA0928 TonB-like protein; TonB family protein 665590..666336 Serratia proteamaculans 568 5606346 YP_001476836.1 CDS Spro_0602 NC_009832.1 666376 668619 D PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: eca:ECA0927 TonB-dependent receptor; TonB-dependent receptor 666376..668619 Serratia proteamaculans 568 5606347 YP_001476837.1 CDS Spro_0603 NC_009832.1 668636 669289 D PFAM: MotA/TolQ/ExbB proton channel; KEGG: eca:ECA0926 putative biopolymer transport protein; MotA/TolQ/ExbB proton channel 668636..669289 Serratia proteamaculans 568 5606313 YP_001476838.1 CDS Spro_0604 NC_009832.1 669282 670532 D PFAM: phospholipase D/Transphosphatidylase; KEGG: eca:ECA0925 putative phospholipase; phospholipase D/transphosphatidylase 669282..670532 Serratia proteamaculans 568 5606314 YP_001476839.1 CDS Spro_0605 NC_009832.1 670567 671676 R PFAM: peptidase S58 DmpA; KEGG: pfo:Pfl_3533 peptidase S58, DmpA; peptidase S58 DmpA complement(670567..671676) Serratia proteamaculans 568 5606315 YP_001476840.1 CDS Spro_0606 NC_009832.1 671793 673301 R TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: aav:Aave_4746 methylmalonate-semialdehyde dehydrogenase; methylmalonate-semialdehyde dehydrogenase complement(671793..673301) Serratia proteamaculans 568 5606045 YP_001476841.1 CDS Spro_0607 NC_009832.1 673317 674657 R catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate; beta alanine--pyruvate transaminase complement(673317..674657) Serratia proteamaculans 568 5606046 YP_001476842.1 CDS Spro_0608 NC_009832.1 674788 675717 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rfr:Rfer_0374 transcriptional regulator, LysR family; LysR family transcriptional regulator 674788..675717 Serratia proteamaculans 568 5606047 YP_001476843.1 CDS Spro_0609 NC_009832.1 675866 676144 D PFAM: transposase IS3/IS911 family protein; KEGG: psa:PST_3402 ISxac3 transposase; transposase IS3/IS911 family protein 675866..676144 Serratia proteamaculans 568 5606304 YP_001476844.1 CDS Spro_0610 NC_009832.1 676165 677016 D PFAM: Integrase catalytic region; KEGG: psa:PST_1859 transposase, IS3 family; Integrase catalytic subunit 676165..677016 Serratia proteamaculans 568 5606305 YP_001476845.1 CDS Spro_0611 NC_009832.1 677089 678216 R PFAM: iron-containing alcohol dehydrogenase; KEGG: cte:CT0951 alcohol dehydrogenase, iron-containing; iron-containing alcohol dehydrogenase complement(677089..678216) Serratia proteamaculans 568 5606306 YP_001476846.1 CDS Spro_0612 NC_009832.1 678483 679241 D PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; KEGG: plu:plu4288 hypothetical protein; LuxR family transcriptional regulator 678483..679241 Serratia proteamaculans 568 5606275 YP_001476847.1 CDS Spro_0613 NC_009832.1 679278 680642 D PFAM: FAD dependent oxidoreductase; KEGG: plu:plu4287 unnamed protein product; highly similar to probable oxidoreductase; FAD dependent oxidoreductase 679278..680642 Serratia proteamaculans 568 5606276 YP_001476848.1 CDS Spro_0614 NC_009832.1 680664 681029 D PFAM: protein of unknown function DUF861 cupin_3; KEGG: plu:plu4286 hypothetical protein; hypothetical protein 680664..681029 Serratia proteamaculans 568 5606201 YP_001476849.1 CDS Spro_0615 NC_009832.1 681067 681873 R PFAM: alpha/beta hydrolase fold; KEGG: sco:SCO6966 lipase; alpha/beta hydrolase fold domain-containing protein complement(681067..681873) Serratia proteamaculans 568 5606202 YP_001476850.1 CDS Spro_0616 NC_009832.1 681963 683075 R PFAM: histone deacetylase superfamily; KEGG: kpn:KPN_00530 putative deacetylase; histone deacetylase superfamily protein complement(681963..683075) Serratia proteamaculans 568 5606203 YP_001476851.1 CDS Spro_0617 NC_009832.1 683089 684261 R PFAM: major facilitator superfamily MFS_1; KEGG: pau:PA14_15270 putative permease; major facilitator transporter complement(683089..684261) Serratia proteamaculans 568 5606177 YP_001476852.1 CDS Spro_0618 NC_009832.1 684402 685049 R PFAM: regulatory protein LuxR; KEGG: plu:plu4274 hypothetical protein; LuxR family transcriptional regulator complement(684402..685049) Serratia proteamaculans 568 5606178 YP_001476853.1 CDS Spro_0619 NC_009832.1 685816 687309 D PFAM: amino acid permease-associated region; KEGG: plu:plu4273 hypothetical protein; amino acid permease-associated protein 685816..687309 Serratia proteamaculans 568 5606179 YP_001476854.1 CDS Spro_0620 NC_009832.1 687284 687871 D KEGG: plu:plu4272 hypothetical protein; hypothetical protein 687284..687871 Serratia proteamaculans 568 5606171 YP_001476855.1 CDS Spro_0621 NC_009832.1 687864 688646 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: kpn:KPN_00526 putative 3-ketoacyl-(acyl-carrier-protein) reductase; short-chain dehydrogenase/reductase SDR 687864..688646 Serratia proteamaculans 568 5606172 YP_001476856.1 CDS Spro_0622 NC_009832.1 688657 689454 D KEGG: bpm:BURPS1710b_A2463 MoaF; MoaF 688657..689454 Serratia proteamaculans 568 5606173 YP_001476857.1 CDS Spro_0623 NC_009832.1 689459 690241 D Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-(acyl-carrier-protein) reductase 689459..690241 Serratia proteamaculans 568 5605851 YP_001476858.1 CDS Spro_0624 NC_009832.1 690291 690746 R TIGRFAM: homoprotocatechuate degradation operon regulator, HpaR; PFAM: regulatory protein MarR; KEGG: plu:plu0991 homoprotocatechuate degradation operon regulator; MarR family transcriptional regulator complement(690291..690746) Serratia proteamaculans 568 5605852 YP_001476859.1 CDS Spro_0625 NC_009832.1 691072 691704 D KEGG: plu:plu0990 hypothetical protein; TIGRFAM: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, HpaG1 subunit; PFAM: fumarylacetoacetate (FAA) hydrolase; 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase subunit HpaG1 691072..691704 Serratia proteamaculans 568 5605853 YP_001476860.1 CDS Spro_0626 NC_009832.1 691701 692465 D KEGG: plu:plu0989 similar to C-terminal region of 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase HpaG [includes: 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (HHDD isomerase); 5-carboxymethyl-2-oxo-hex-3-ene-1,7-dioate decarboxylase (OPET decarboxylase)]; TIGRFAM: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, HpaG2 subunit; PFAM: fumarylacetoacetate (FAA) hydrolase; 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase subunit HpaG2 691701..692465 Serratia proteamaculans 568 5606080 YP_001476861.1 CDS Spro_0627 NC_009832.1 692462 693916 D TIGRFAM: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: kpn:KPN_04787 4-hydroxyphenylacetate catabolism; 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase 692462..693916 Serratia proteamaculans 568 5606081 YP_001476862.1 CDS Spro_0628 NC_009832.1 693926 694783 D KEGG: kpn:KPN_04786 4-hydroxyphenylacetate catabolism; TIGRFAM: 3,4-dihydroxyphenylacetate 2,3-dioxygenase; PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; 3,4-dihydroxyphenylacetate 2,3-dioxygenase 693926..694783 Serratia proteamaculans 568 5606074 YP_001476863.1 CDS Spro_0629 NC_009832.1 694793 695179 D PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase; KEGG: plu:plu0986 5-carboxymethyl-2-hydroxy-muconic acid isomerase; 5-carboxymethyl-2-hydroxymuconate isomerase 694793..695179 Serratia proteamaculans 568 5606075 YP_001476864.1 CDS Spro_0630 NC_009832.1 695190 695993 D KEGG: ssn:SSON_4495 2-oxo-hept-3-ene-1,7-dioate hydratase; TIGRFAM: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; PFAM: Hydratase/decarboxylase; 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 695190..695993 Serratia proteamaculans 568 5606076 YP_001476865.1 CDS Spro_0631 NC_009832.1 696210 697004 D KEGG: ssn:SSON_4494 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (HHED aldolase); TIGRFAM: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; PFAM: HpcH/HpaI aldolase; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 696210..697004 Serratia proteamaculans 568 5606062 YP_001476866.1 CDS Spro_0632 NC_009832.1 697035 698405 D TIGRFAM: 4-hydroxyphenylacetate transporter; PFAM: major facilitator superfamily MFS_1; KEGG: sbo:SBO_4406 putative 4-hydroxyphenylacetate permease; 4-hydroxyphenylacetate transporter 697035..698405 Serratia proteamaculans 568 5606063 YP_001476867.1 CDS Spro_0633 NC_009832.1 698465 699361 D TIGRFAM: 4-hydroxyphenylacetate catabolism regulatory protein HpaA; PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: kpn:KPN_04781 4-hydroxyphenylacetate catabolism; AraC family transcriptional regulator 698465..699361 Serratia proteamaculans 568 5606064 YP_001476868.1 CDS Spro_0634 NC_009832.1 699541 701103 D TIGRFAM: 4-hydroxyphenylacetate 3-monooxygenase, oxygenase subunit; PFAM: 4-hydroxyphenylacetate 3-hydroxylase; KEGG: stm:STM1099 4-hydroxyphenylacetate catabolism; 4-hydroxyphenylacetate 3-monooxygenase, oxygenase subunit 699541..701103 Serratia proteamaculans 568 5606053 YP_001476869.1 CDS Spro_0635 NC_009832.1 701121 701636 D TIGRFAM: 4-hydroxyphenylacetate 3-monooxygenase, reductase subunit; PFAM: flavin reductase domain protein FMN-binding; KEGG: plu:plu0974 4-hydroxyphenylacetic acid hydroxylase; 4-hydroxyphenylacetate 3-monooxygenase, reductase subunit 701121..701636 Serratia proteamaculans 568 5606054 YP_001476870.1 CDS Spro_0636 NC_009832.1 701674 702816 R this protein has no known enzymatic function; beta-lactam binding protein AmpH complement(701674..702816) Serratia proteamaculans 568 5606055 YP_001476871.1 CDS Spro_0637 NC_009832.1 702978 703736 R PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bvi:Bcep1808_3378 GntR domain protein; GntR domain-containing protein complement(702978..703736) Serratia proteamaculans 568 5606042 YP_001476872.1 CDS Spro_0638 NC_009832.1 703972 704712 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ypi:YpsIP31758_2412 oxidoreductase, short chain dehydrogenase/reductase family protein; short-chain dehydrogenase/reductase SDR 703972..704712 Serratia proteamaculans 568 5606043 YP_001476873.1 CDS Spro_0639 NC_009832.1 704747 705592 D PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: ypi:YpsIP31758_2411 fumarylacetoacetate hydrolase family protein; 5-carboxymethyl-2-hydroxymuconate delta-isomerase 704747..705592 Serratia proteamaculans 568 5606044 YP_001476874.1 CDS Spro_0640 NC_009832.1 705606 706883 D PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: ypi:YpsIP31758_2410 mandelate racemase/muconate lactonizing enzyme family protein; mandelate racemase/muconate lactonizing protein 705606..706883 Serratia proteamaculans 568 5606020 YP_001476875.1 CDS Spro_0641 NC_009832.1 706898 707761 D PFAM: amidohydrolase 2; KEGG: bvi:Bcep1808_3379 amidohydrolase 2; amidohydrolase 2 706898..707761 Serratia proteamaculans 568 5606021 YP_001476876.1 CDS Spro_0642 NC_009832.1 707739 708515 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bvi:Bcep1808_3383 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase 707739..708515 Serratia proteamaculans 568 5605886 YP_001476877.1 CDS Spro_0643 NC_009832.1 708512 708871 D KEGG: rfr:Rfer_3138 hypothetical protein; hypothetical protein 708512..708871 Serratia proteamaculans 568 5605887 YP_001476878.1 CDS Spro_0644 NC_009832.1 708895 710124 D TIGRFAM: L-fucose transporter; PFAM: major facilitator superfamily MFS_1; KEGG: cff:CFF8240_1066 L-fucose:H+ symporter permease; L-fucose transporter 708895..710124 Serratia proteamaculans 568 5605888 YP_001476879.1 CDS Spro_0645 NC_009832.1 710142 711215 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: yen:YE0557 HmsT protein; diguanylate cyclase complement(710142..711215) Serratia proteamaculans 568 5605812 YP_001476880.1 CDS Spro_0646 NC_009832.1 711479 711763 D PFAM: protein of unknown function DUF1435; KEGG: eca:ECA0738 hypothetical protein; hypothetical protein 711479..711763 Serratia proteamaculans 568 5605813 YP_001476881.1 CDS Spro_0647 NC_009832.1 712258 713202 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: yen:YE0559 LysR-family regulatory protein; LysR family transcriptional regulator complement(712258..713202) Serratia proteamaculans 568 5606730 YP_001476882.1 CDS Spro_0648 NC_009832.1 713333 714325 D PFAM: aldo/keto reductase; KEGG: eca:ECA0736 putative aldo/keto reductase; aldo/keto reductase 713333..714325 Serratia proteamaculans 568 5605797 YP_001476883.1 CDS rsmC NC_009832.1 714386 715429 R 16S rRNA M2G1207 methyltransferase; one of many enzymes that modify bases of the ribosomal RNA; this enzyme methylates the G at position 1207 of the small ribosomal subunit; 16S ribosomal RNA m2G1207 methyltransferase complement(714386..715429) Serratia proteamaculans 568 5605798 YP_001476884.1 CDS Spro_0650 NC_009832.1 715586 716023 D with the chi subunit binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB; DNA polymerase III subunit psi 715586..716023 Serratia proteamaculans 568 5605799 YP_001476885.1 CDS rimI NC_009832.1 715968 716411 D alanine acetyltransferase that specifically acetylates ribosomal protein S18; ribosomal-protein-alanine N-acetyltransferase 715968..716411 Serratia proteamaculans 568 5605778 YP_001476886.1 CDS prfC NC_009832.1 716580 718169 D stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein; peptide chain release factor 3 716580..718169 Serratia proteamaculans 568 5605779 YP_001476887.1 CDS Spro_0653 NC_009832.1 718704 719318 D PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: ypi:YpsIP31758_3503 osmotically induced periplasmic protein OsmY; periplasmic protein 718704..719318 Serratia proteamaculans 568 5605780 YP_001476888.1 CDS Spro_0654 NC_009832.1 719380 719637 D PFAM: protein of unknown function DUF1328; KEGG: kpn:KPN_04833 putative amino acid/amine transport protein; hypothetical protein 719380..719637 Serratia proteamaculans 568 5605749 YP_001476889.1 CDS Spro_0655 NC_009832.1 719696 719881 D KEGG: eca:ECA0471 hypothetical protein; hypothetical protein 719696..719881 Serratia proteamaculans 568 5605750 YP_001476890.1 CDS Spro_0656 NC_009832.1 719892 721013 D PFAM: Patatin; KEGG: yen:YE0567 hypothetical protein; patatin 719892..721013 Serratia proteamaculans 568 5605746 YP_001476891.1 CDS Spro_0657 NC_009832.1 721013 721786 D PFAM: TatD-related deoxyribonuclease; KEGG: ypp:YPDSF_3199 metalloenzyme; TatD-related deoxyribonuclease 721013..721786 Serratia proteamaculans 568 5605747 YP_001476892.1 CDS Spro_0658 NC_009832.1 722150 723703 D PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: ecv:APECO1_2528 hypothetical protein; 5'-nucleotidase domain-containing protein 722150..723703 Serratia proteamaculans 568 5605748 YP_001476893.1 CDS Spro_0659 NC_009832.1 723924 725201 D TIGRFAM: nucleoside transporter; PFAM: Na+ dependent nucleoside transporter; nucleoside recognition domain protein; Na+ dependent nucleoside transporter domain protein; KEGG: ypm:YP_3746 putative Na+ dependent nucleosidetransporter-family protein; nucleoside transporter 723924..725201 Serratia proteamaculans 568 5605712 YP_001476894.1 CDS Spro_0660 NC_009832.1 725574 726353 D catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase 725574..726353 Serratia proteamaculans 568 5605713 YP_001476895.1 CDS deoA NC_009832.1 726423 727745 D Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate; thymidine phosphorylase 726423..727745 Serratia proteamaculans 568 5605714 YP_001476896.1 CDS Spro_0662 NC_009832.1 727815 729038 D catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose; phosphopentomutase 727815..729038 Serratia proteamaculans 568 5605688 YP_001476897.1 CDS Spro_0663 NC_009832.1 729110 729841 D TIGRFAM: purine nucleoside phosphorylase; PFAM: purine or other phosphorylase family 1; KEGG: yen:YE0574 purine nucleoside phosphorylase; purine nucleoside phosphorylase 729110..729841 Serratia proteamaculans 568 5605689 YP_001476898.1 CDS Spro_0664 NC_009832.1 729982 731325 D PFAM: HipA domain protein; KEGG: yen:YE0575 putative DNA-binding protein; hypothetical protein 729982..731325 Serratia proteamaculans 568 5605690 YP_001476899.1 CDS Spro_0665 NC_009832.1 731322 732026 R KEGG: yps:YPTB0585 membrane protein, transcribed divergently from SerB; hypothetical protein complement(731322..732026) Serratia proteamaculans 568 5605679 YP_001476900.1 CDS serB NC_009832.1 732131 733108 D catalyzes the formation of serine from O-phosphoserine; phosphoserine phosphatase 732131..733108 Serratia proteamaculans 568 5605680 YP_001476901.1 CDS Spro_0667 NC_009832.1 733171 734556 D Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 733171..734556 Serratia proteamaculans 568 5605681 YP_001476902.1 CDS Spro_0668 NC_009832.1 734613 735872 D catalyzes the formation of NAD(+) from nicotinamide ribonucleotide; nicotinamide-nucleotide adenylyltransferase 734613..735872 Serratia proteamaculans 568 5605660 YP_001476903.1 CDS Spro_0669 NC_009832.1 735909 736910 R TIGRFAM: Alcohol dehydrogenase. zinc-binding type 1; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: yen:YE0581 putative oxidoreductase; zinc-binding alcohol dehydrogenase complement(735909..736910) Serratia proteamaculans 568 5605661 YP_001476904.1 CDS Spro_0670 NC_009832.1 737009 737920 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: yen:YE0582 putative LysR-family transcriptional regulatory protein; LysR family transcriptional regulator 737009..737920 Serratia proteamaculans 568 5605643 YP_001476905.1 CDS Spro_0671 NC_009832.1 738101 739768 R ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; putative ABC transporter ATP-binding protein complement(738101..739768) Serratia proteamaculans 568 5605644 YP_001476906.1 CDS Spro_0672 NC_009832.1 739909 740406 R PFAM: OmpA/MotB domain protein; KEGG: ypi:YpsIP31758_3488 OmpA family protein; OmpA/MotB domain-containing protein complement(739909..740406) Serratia proteamaculans 568 5605645 YP_001476907.1 CDS Spro_0673 NC_009832.1 740443 741690 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: yen:YE0586 hypothetical protein; diguanylate cyclase complement(740443..741690) Serratia proteamaculans 568 5605640 YP_001476908.1 CDS Spro_0674 NC_009832.1 741687 742301 R KEGG: yen:YE0587 hypothetical protein; hypothetical protein complement(741687..742301) Serratia proteamaculans 568 5605641 YP_001476909.1 CDS Spro_0675 NC_009832.1 743047 744975 D catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine residues in peptidoglycan; lytic murein transglycosylase 743047..744975 Serratia proteamaculans 568 5605642 YP_001476910.1 CDS Spro_0676 NC_009832.1 745031 745360 D When complexed with L-tryptophan it binds the operator region of the trp operon and prevents the initiation of transcription; Trp operon repressor 745031..745360 Serratia proteamaculans 568 5605631 YP_001476911.1 CDS Spro_0677 NC_009832.1 745379 745918 R pyrophosphatase; has activity against dUTP and dITP; the crystal structure of the Vibrio protein showed similarity to Methanococcus janaschii Mj0226; in Vibrio cholerae this gene is part of the Mba operon that is involved in regulation and maintenance of biofilms; in Escherichia coli overexpression of this gene leads to resistance to an HMP analog; NTPase complement(745379..745918) Serratia proteamaculans 568 5605632 YP_001476912.1 CDS Spro_0678 NC_009832.1 746030 746677 D catalyzes reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate; phosphoglycerate mutase 746030..746677 Serratia proteamaculans 568 5605633 YP_001476913.1 CDS Spro_0679 NC_009832.1 746674 747543 R PFAM: helix-turn-helix- domain containing protein AraC type; transcription activator effector binding; KEGG: yen:YE0593 putative right origin-binding protein; AraC family transcriptional regulator complement(746674..747543) Serratia proteamaculans 568 5605619 YP_001476914.1 CDS Spro_0680 NC_009832.1 747885 748364 D PFAM: CreA family protein; KEGG: ypi:YpsIP31758_3479 CreA protein; hypothetical protein 747885..748364 Serratia proteamaculans 568 5605620 YP_001476915.1 CDS Spro_0681 NC_009832.1 748413 749129 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: yen:YE0595 aerobic respiration control protein; two-component response regulator complement(748413..749129) Serratia proteamaculans 568 5605621 YP_001476916.1 CDS Spro_0682 NC_009832.1 749763 750449 D member of the SPOUT superfamily of methyltransferases; putative RNA methyltransferase 749763..750449 Serratia proteamaculans 568 5605617 YP_001476917.1 CDS thrA NC_009832.1 750813 753272 D multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; bifunctional aspartokinase I/homoserine dehydrogenase I 750813..753272 Serratia proteamaculans 568 5605618 YP_001476918.1 CDS Spro_0684 NC_009832.1 753274 754203 D catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase 753274..754203 Serratia proteamaculans 568 5605602 YP_001476919.1 CDS Spro_0685 NC_009832.1 754207 755496 D catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 754207..755496 Serratia proteamaculans 568 5605603 YP_001476920.1 CDS Spro_0686 NC_009832.1 755711 756484 R PFAM: protein of unknown function DUF328; KEGG: yen:YE0603 hypothetical protein; hypothetical protein complement(755711..756484) Serratia proteamaculans 568 5605604 YP_001476921.1 CDS Spro_0687 NC_009832.1 756589 758013 R TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: plu:plu2791 unnamed protein product; highly similar to probable amino acid transport protein YaaJ, sodium-dependent of Escherichia coli; amino acid carrier protein complement(756589..758013) Serratia proteamaculans 568 5605569 YP_001476922.1 CDS Spro_0688 NC_009832.1 758395 759348 D KEGG: yen:YE0604 transaldolase B; TIGRFAM: transaldolase; PFAM: Transaldolase; transaldolase B 758395..759348 Serratia proteamaculans 568 5605570 YP_001476923.1 CDS mogA NC_009832.1 759499 760086 D forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MogA 759499..760086 Serratia proteamaculans 568 5605571 YP_001476924.1 CDS Spro_0690 NC_009832.1 760211 761518 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: yen:YE0606 putative transport protein; major facilitator transporter 760211..761518 Serratia proteamaculans 568 5605566 YP_001476925.1 CDS Spro_0691 NC_009832.1 761571 762170 R PFAM: GPR1/FUN34/yaaH family protein; KEGG: yen:YE0608 hypothetical protein; hypothetical protein complement(761571..762170) Serratia proteamaculans 568 5605567 YP_001476926.1 CDS dnaK NC_009832.1 762495 764408 D heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 762495..764408 Serratia proteamaculans 568 5605568 YP_001476927.1 CDS Spro_0693 NC_009832.1 764515 765642 D chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ 764515..765642 Serratia proteamaculans 568 5605534 YP_001476928.1 CDS nhaA NC_009832.1 765849 767045 D exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH; pH-dependent sodium/proton antiporter 765849..767045 Serratia proteamaculans 568 5605535 YP_001476929.1 CDS nhaR NC_009832.1 767251 768144 D Na+/H+ antiporter regulatory protein; activates the genes nhaA and osmC; transcriptional activator NhaR 767251..768144 Serratia proteamaculans 568 5605536 YP_001476930.1 CDS Spro_0696 NC_009832.1 768214 768474 R PFAM: ribosomal protein S20; KEGG: eca:ECA3878 30S ribosomal protein S20; 30S ribosomal protein S20 complement(768214..768474) Serratia proteamaculans 568 5605529 YP_001476931.1 CDS Spro_0697 NC_009832.1 768865 769803 D catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase 768865..769803 Serratia proteamaculans 568 5605530 YP_001476932.1 CDS ileS NC_009832.1 769836 772652 D IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 769836..772652 Serratia proteamaculans 568 5605478 YP_001476933.1 CDS lspA NC_009832.1 772652 773161 D lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 772652..773161 Serratia proteamaculans 568 5605479 YP_001476934.1 CDS Spro_0700 NC_009832.1 773163 773633 D PFAM: peptidylprolyl isomerase FKBP-type; KEGG: ypp:YPDSF_3155 FKBP-type peptidyl-prolyl cis-trans isomerase; FKBP-type peptidylprolyl isomerase 773163..773633 Serratia proteamaculans 568 5605480 YP_001476935.1 CDS ispH NC_009832.1 773614 774567 D catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 773614..774567 Serratia proteamaculans 568 5605464 YP_001476936.1 CDS Spro_0702 NC_009832.1 774875 775798 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pmy:Pmen_0810 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(774875..775798) Serratia proteamaculans 568 5605465 YP_001476937.1 CDS Spro_0703 NC_009832.1 776068 776955 D PFAM: Pyoverdine biosynthesis protein; KEGG: eca:ECA3381 pyoverdine biosynthesis protein; pyoverdine biosynthesis protein 776068..776955 Serratia proteamaculans 568 5605466 YP_001476938.1 CDS Spro_0704 NC_009832.1 777046 777909 D PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: eca:ECA3380 pyoverdine biosynthesis protein; taurine catabolism dioxygenase TauD/TfdA 777046..777909 Serratia proteamaculans 568 5605458 YP_001476939.1 CDS Spro_0705 NC_009832.1 777915 779186 D TIGRFAM: glycosyltransferase, MGT family; PFAM: glycosyl transferase family 28; KEGG: eca:ECA3379 putative glycosyltransferase; glycosyl transferase family protein 777915..779186 Serratia proteamaculans 568 5605459 YP_001476940.1 CDS Spro_0706 NC_009832.1 779240 780022 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_A0545 putative short-chain dehydrogenase/reductase, FabG-like; short-chain dehydrogenase/reductase SDR complement(779240..780022) Serratia proteamaculans 568 5605460 YP_001476941.1 CDS Spro_0707 NC_009832.1 780048 780950 R PFAM: dihydrodipicolinate synthetase; KEGG: vvy:VVA1582 putative dihydrodipicolinate synthase; dihydrodipicolinate synthetase complement(780048..780950) Serratia proteamaculans 568 5605284 YP_001476942.1 CDS Spro_0708 NC_009832.1 780950 782662 R KEGG: vvy:VVA1581 putative dihydroxy-acid dehydratase; TIGRFAM: dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; dihydroxy-acid dehydratase complement(780950..782662) Serratia proteamaculans 568 5605285 YP_001476943.1 CDS Spro_0709 NC_009832.1 782665 784053 R PFAM: major facilitator superfamily MFS_1; KEGG: rso:RSc2352 probable permease transmembrane protein; major facilitator transporter complement(782665..784053) Serratia proteamaculans 568 5605286 YP_001476944.1 CDS Spro_0710 NC_009832.1 784082 785512 R KEGG: ecs:ECs3819 galactose-proton symport of transport system; TIGRFAM: sugar transporter; PFAM: General substrate transporter; major facilitator superfamily MFS_1; sugar transporter complement(784082..785512) Serratia proteamaculans 568 5605276 YP_001476945.1 CDS Spro_0711 NC_009832.1 785718 786449 R PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: vvy:VVA1573 hypothetical protein; GntR domain-containing protein complement(785718..786449) Serratia proteamaculans 568 5605277 YP_001476946.1 CDS Spro_0712 NC_009832.1 786770 787591 D PFAM: dihydrodipicolinate reductase; KEGG: eca:ECA3872 dihydrodipicolinate reductase; dihydrodipicolinate reductase 786770..787591 Serratia proteamaculans 568 5605226 YP_001476947.1 CDS Spro_0713 NC_009832.1 788062 789210 D catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 788062..789210 Serratia proteamaculans 568 5605227 YP_001476948.1 CDS carB NC_009832.1 789226 792450 D four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 789226..792450 Serratia proteamaculans 568 5605228 YP_001476949.1 CDS Spro_0715 NC_009832.1 792631 793188 D Required for full activity of KefC, a potassium-proton antiporter; glutathione-regulated potassium-efflux system ancillary protein KefF 792631..793188 Serratia proteamaculans 568 5605139 YP_001476950.1 CDS Spro_0716 NC_009832.1 793181 795034 D transport system that facilitates potassium-efflux; glutathione-regulated potassium-efflux system protein KefC 793181..795034 Serratia proteamaculans 568 5605140 YP_001476951.1 CDS Spro_0717 NC_009832.1 795078 795692 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: eca:ECA3867 putative LysE-type translocator; lysine exporter protein LysE/YggA complement(795078..795692) Serratia proteamaculans 568 5605141 YP_001476952.1 CDS Spro_0718 NC_009832.1 795821 796621 D PFAM: protein of unknown function DUF1212; KEGG: yps:YPTB0626 putative transmembrane protein; hypothetical protein 795821..796621 Serratia proteamaculans 568 5605133 YP_001476953.2 CDS Spro_0719 NC_009832.1 796612 797082 D KEGG: ypi:YpsIP31758_3450 hypothetical protein; hypothetical protein 796612..797082 Serratia proteamaculans 568 5605134 YP_001476954.1 CDS folA NC_009832.1 797226 797708 D catalyzes the reduction of dihydrofolate to tetrahydrofolate; dihydrofolate reductase 797226..797708 Serratia proteamaculans 568 5605135 YP_001476955.1 CDS Spro_0721 NC_009832.1 797902 799791 D PFAM: protein of unknown function DUF839; KEGG: pfl:PFL_5696 Tat (twin-arginine translocation) pathway signal sequence domain protein; hypothetical protein 797902..799791 Serratia proteamaculans 568 5605109 YP_001476956.1 CDS apaH NC_009832.1 799830 800681 R hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP; diadenosine tetraphosphatase complement(799830..800681) Serratia proteamaculans 568 5605110 YP_001476957.1 CDS apaG NC_009832.1 800684 801061 R protein associated with Co2+ and Mg2+ efflux; ApaG protein complement(800684..801061) Serratia proteamaculans 568 5605111 YP_001476958.1 CDS ksgA NC_009832.1 801074 801892 R catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase complement(801074..801892) Serratia proteamaculans 568 5605068 YP_001476959.1 CDS pdxA NC_009832.1 801885 802877 R catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase complement(801885..802877) Serratia proteamaculans 568 5605069 YP_001476960.1 CDS Spro_0726 NC_009832.1 802864 804162 R Chaperone involved in the folding of extracytoplasmic proteins, especially OmpA, OmpF and LamB; peptidyl-prolyl cis-trans isomerase SurA complement(802864..804162) Serratia proteamaculans 568 5605014 YP_001476961.1 CDS Spro_0727 NC_009832.1 804228 806591 R determines N-hexane tolerance and is involved in outer membrane permeability; organic solvent tolerance protein complement(804228..806591) Serratia proteamaculans 568 5605015 YP_001476962.1 CDS djlA NC_009832.1 806820 807641 D functions as a co-chaperone with DnaK; involved in regulation of colanic acid capsule; inner membrane protein; dimerized via transmembrane domain; J-like domain is cytoplasmic and can functionally substitute for DnaJ; stimulates synthesis of colanic acid mucoid capsule through the RcsB/C signal transduction system; Dna-J like membrane chaperone protein 806820..807641 Serratia proteamaculans 568 5605016 YP_001476963.1 CDS Spro_0729 NC_009832.1 807690 808340 R PFAM: pseudouridine synthase; KEGG: eca:ECA3854 ribosomal large subunit pseudouridine synthase A; pseudouridine synthase complement(807690..808340) Serratia proteamaculans 568 5605005 YP_001476964.1 CDS Spro_0730 NC_009832.1 808397 811303 R transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA; ATP-dependent helicase HepA complement(808397..811303) Serratia proteamaculans 568 5605006 YP_001476965.1 CDS Spro_0731 NC_009832.1 811689 814052 R Has polymerase, DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C; DNA polymerase II complement(811689..814052) Serratia proteamaculans 568 5605007 YP_001476966.1 CDS Spro_0732 NC_009832.1 814236 815006 D PFAM: SNARE associated Golgi protein; KEGG: yen:YE0639 putative DedA-family membrane protein; hypothetical protein 814236..815006 Serratia proteamaculans 568 5603773 YP_001476967.1 CDS Spro_0733 NC_009832.1 815034 815327 R with IlvB catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase small subunit; acetolactate synthase 1 regulatory subunit complement(815034..815327) Serratia proteamaculans 568 5603774 YP_001476968.1 CDS Spro_0734 NC_009832.1 815331 817025 R TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: eca:ECA3848 acetolactate synthase isozyme I large subunit; acetolactate synthase catalytic subunit complement(815331..817025) Serratia proteamaculans 568 5603775 YP_001476969.1 CDS thiQ NC_009832.1 817342 818046 R with TbpA and ThiP is part of the thiamine and TPP transport system; thiamine transporter ATP-binding subunit complement(817342..818046) Serratia proteamaculans 568 5604942 YP_001476970.1 CDS thiP NC_009832.1 818033 819640 R permease; with TbpA and ThiQ functions in transport of thiamine and thiamine pyrophosphate into the cell; repressed in presence of exogenous thiamine; thiamine transporter membrane protein complement(818033..819640) Serratia proteamaculans 568 5604943 YP_001476971.1 CDS tbpA NC_009832.1 819616 820602 R part of the thiamine and TPP transport system tbpA-thiPQ; thiamine transporter substrate binding subunit complement(819616..820602) Serratia proteamaculans 568 5604944 YP_001476972.1 CDS Spro_0738 NC_009832.1 820804 822465 R activates sgrS under glucose-phosphate stress conditions; transcriptional regulator SgrR complement(820804..822465) Serratia proteamaculans 568 5604910 YP_001476973.1 CDS Spro_0739 NC_009832.1 822556 822729 D hypothetical protein 822556..822729 Serratia proteamaculans 568 5604911 YP_001476974.1 CDS Spro_0740 NC_009832.1 822886 824085 D TIGRFAM: sugar efflux transporter; PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE0648 sugar efflux transporter; sugar efflux transporter 822886..824085 Serratia proteamaculans 568 5604901 YP_001476975.1 CDS Spro_0741 NC_009832.1 824227 825699 D TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rfr:Rfer_1465 anion transporter; anion transporter 824227..825699 Serratia proteamaculans 568 5604902 YP_001476976.1 CDS leuD NC_009832.1 825749 826351 R catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit complement(825749..826351) Serratia proteamaculans 568 5604903 YP_001476977.1 CDS Spro_0743 NC_009832.1 826363 827763 R dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit complement(826363..827763) Serratia proteamaculans 568 5604886 YP_001476978.1 CDS Spro_0744 NC_009832.1 827765 828856 R catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase complement(827765..828856) Serratia proteamaculans 568 5604887 YP_001476979.1 CDS Spro_0745 NC_009832.1 828859 830433 R catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase complement(828859..830433) Serratia proteamaculans 568 5604888 YP_001476980.1 CDS leuO NC_009832.1 831312 832259 D activator for leuABCD operon; member of LysR family of transcriptional activators; leucine transcriptional activator 831312..832259 Serratia proteamaculans 568 5604883 YP_001476981.1 CDS Spro_0747 NC_009832.1 832725 834533 D PFAM: AMP-dependent synthetase and ligase; KEGG: ypi:YpsIP31758_3402 AMP binding protein; AMP-dependent synthetase and ligase 832725..834533 Serratia proteamaculans 568 5604884 YP_001476982.1 CDS Spro_0748 NC_009832.1 834851 836569 D catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; acetolactate synthase 3 catalytic subunit 834851..836569 Serratia proteamaculans 568 5604885 YP_001476983.1 CDS ilvH NC_009832.1 836572 837063 D with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit 836572..837063 Serratia proteamaculans 568 5604819 YP_001476984.1 CDS Spro_0750 NC_009832.1 837280 838284 D binds D-fructose as an inducer; involved in regulation of operons for central pathways of carbon metabolism; DNA-binding transcriptional regulator FruR 837280..838284 Serratia proteamaculans 568 5604820 YP_001476985.1 CDS Spro_0751 NC_009832.1 838318 838758 R PFAM: protein of unknown function DUF1144; KEGG: ypi:YpsIP31758_3397 hypothetical protein; hypothetical protein complement(838318..838758) Serratia proteamaculans 568 5604821 YP_001476986.1 CDS Spro_0752 NC_009832.1 839629 840087 D MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ 839629..840087 Serratia proteamaculans 568 5604770 YP_001476987.1 CDS mraW NC_009832.1 840090 841031 D TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: ypi:YpsIP31758_3395 S-adenosyl-methyltransferase MraW; S-adenosyl-methyltransferase MraW 840090..841031 Serratia proteamaculans 568 5604771 YP_001476988.1 CDS Spro_0754 NC_009832.1 841028 841348 D membrane bound cell division protein at septum containing leucine zipper motif; cell division protein FtsL 841028..841348 Serratia proteamaculans 568 5603485 YP_001476989.1 CDS Spro_0755 NC_009832.1 841391 843154 D PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: yen:YE0666 penicillin-binding protein 3; peptidoglycan glycosyltransferase 841391..843154 Serratia proteamaculans 568 5603486 YP_001476990.1 CDS murE NC_009832.1 843141 844628 D involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 843141..844628 Serratia proteamaculans 568 5603487 YP_001476991.1 CDS murF NC_009832.1 844625 845986 D TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: ypp:YPDSF_3091 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamino pimelate--D-alanyl-D-alanyl ligase; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 844625..845986 Serratia proteamaculans 568 5604741 YP_001476992.1 CDS mraY NC_009832.1 845980 847062 D First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 845980..847062 Serratia proteamaculans 568 5604742 YP_001476993.1 CDS murD NC_009832.1 847065 848384 D UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 847065..848384 Serratia proteamaculans 568 5604743 YP_001476994.1 CDS Spro_0760 NC_009832.1 848381 849583 D integral membrane protein involved in stabilizing FstZ ring during cell division; cell division protein FtsW 848381..849583 Serratia proteamaculans 568 5604637 YP_001476995.1 CDS murG NC_009832.1 849587 850651 D UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 849587..850651 Serratia proteamaculans 568 5604638 YP_001476996.1 CDS murC NC_009832.1 850735 852213 D Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 850735..852213 Serratia proteamaculans 568 5604639 YP_001476997.1 CDS ddl NC_009832.1 852203 853123 D D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase 852203..853123 Serratia proteamaculans 568 5604562 YP_001476998.1 CDS Spro_0764 NC_009832.1 853125 853976 D involved in septum formation; cell division protein FtsQ 853125..853976 Serratia proteamaculans 568 5604563 YP_001476999.1 CDS ftsA NC_009832.1 853973 855229 D ATP-binding involved in recruitment of FtsK to Z ring; essential cell division protein; colocalizes with FtsZ through direct interaction to the septal ring structure; structurally similar to eukaryotic actin; binds directly to the cell membrane; cell division protein FtsA 853973..855229 Serratia proteamaculans 568 5604564 YP_001477000.1 CDS Spro_0766 NC_009832.1 855304 856458 D GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 855304..856458 Serratia proteamaculans 568 5604551 YP_001477001.1 CDS lpxC NC_009832.1 856514 857479 D zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 856514..857479 Serratia proteamaculans 568 5604552 YP_001477002.1 CDS Spro_0768 NC_009832.1 857494 858018 R KEGG: ypi:YpsIP31758_3380 hypothetical protein; hypothetical protein complement(857494..858018) Serratia proteamaculans 568 5604534 YP_001477003.1 CDS Spro_0769 NC_009832.1 858114 858578 D secM translational pause allows for the initiation of secA translation; SecA regulator SecM 858114..858578 Serratia proteamaculans 568 5604535 YP_001477004.1 CDS Spro_0770 NC_009832.1 858645 861377 D functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 858645..861377 Serratia proteamaculans 568 5604536 YP_001477005.1 CDS Spro_0771 NC_009832.1 861479 861883 D TIGRFAM: mutator MutT protein; PFAM: NUDIX hydrolase; KEGG: yen:YE0682 mutator protein MutT; nucleoside triphosphate pyrophosphohydrolase 861479..861883 Serratia proteamaculans 568 5604410 YP_001477006.1 CDS Spro_0772 NC_009832.1 861991 862194 R PFAM: protein of unknown function DUF329; KEGG: ecc:c0121 zinc-binding protein; hypothetical protein complement(861991..862194) Serratia proteamaculans 568 5604411 YP_001477007.1 CDS Spro_0773 NC_009832.1 862245 862997 R PFAM: protein of unknown function DUF1342; KEGG: yen:YE0684 hypothetical protein; hypothetical protein complement(862245..862997) Serratia proteamaculans 568 5604412 YP_001477008.1 CDS coaE NC_009832.1 863003 863617 R catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase complement(863003..863617) Serratia proteamaculans 568 5604324 YP_001477009.1 CDS Spro_0775 NC_009832.1 863949 864992 D catalyzes the NADPH-dependent deamination of GMP to inosine monophosphate; guanosine 5'-monophosphate oxidoreductase 863949..864992 Serratia proteamaculans 568 5604325 YP_001477010.1 CDS Spro_0776 NC_009832.1 865060 866259 R PFAM: type II secretion system protein; KEGG: ypi:YpsIP31758_3372 putative protein transport protein HofC; type IV pilin biogenesis protein complement(865060..866259) Serratia proteamaculans 568 5604326 YP_001477011.1 CDS Spro_0777 NC_009832.1 866256 867701 R PFAM: type II secretion system protein E; KEGG: eca:ECA3799 protein transport protein; hypothetical protein complement(866256..867701) Serratia proteamaculans 568 5604278 YP_001477012.1 CDS Spro_0778 NC_009832.1 867698 868147 R KEGG: yen:YE0690 putative prepilin peptidase dependent protein D precursor; putative major pilin subunit complement(867698..868147) Serratia proteamaculans 568 5604279 YP_001477013.1 CDS Spro_0779 NC_009832.1 868346 869236 R catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide; quinolinate phosphoribosyltransferase complement(868346..869236) Serratia proteamaculans 568 5604280 YP_001477014.1 CDS Spro_0780 NC_009832.1 869452 870306 D involved in regulation of beta-lactamase; putative signaling protein; regulatory protein AmpE 869452..870306 Serratia proteamaculans 568 5604206 YP_001477015.1 CDS Spro_0781 NC_009832.1 870367 871656 R Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase complement(870367..871656) Serratia proteamaculans 568 5604207 YP_001477016.1 CDS Spro_0782 NC_009832.1 871835 873274 D Acts as an electrical shunt for an outwardly-directed proton pump that is linked to amino acid decarboxylation; chloride channel protein 871835..873274 Serratia proteamaculans 568 5604130 YP_001477017.1 CDS Spro_0783 NC_009832.1 873364 873708 D TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: ent:Ent638_0696 iron-sulfur cluster assembly accessory protein; iron-sulfur cluster assembly accessory protein 873364..873708 Serratia proteamaculans 568 5604131 YP_001477018.1 CDS Spro_0784 NC_009832.1 873767 874030 R KEGG: eca:ECA3305 putative lipoprotein; putative lipoprotein complement(873767..874030) Serratia proteamaculans 568 5604132 YP_001477019.1 CDS Spro_0785 NC_009832.1 874242 874856 R PFAM: protein of unknown function UPF0126; KEGG: yen:YE0737 hypothetical protein; hypothetical protein complement(874242..874856) Serratia proteamaculans 568 5604127 YP_001477020.1 CDS Spro_0786 NC_009832.1 874856 875662 R solute binding component of the vitamin B12 transport system BtuCDF; vitamin B12-transporter protein BtuF complement(874856..875662) Serratia proteamaculans 568 5604128 YP_001477021.1 CDS Spro_0787 NC_009832.1 875664 876365 R enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase complement(875664..876365) Serratia proteamaculans 568 5604129 YP_001477022.1 CDS dgt NC_009832.1 876495 878012 D forms a homotetramer; requires magnesium for activity; catalyzes the hydrolysis of dGTP to form deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase 876495..878012 Serratia proteamaculans 568 5604064 YP_001477023.1 CDS Spro_0789 NC_009832.1 878203 879633 D protease Do; required at high temperature; degrades damaged proteins; serine endoprotease 878203..879633 Serratia proteamaculans 568 5604065 YP_001477024.1 CDS Spro_0790 NC_009832.1 879700 882420 R part of the two-component regulatory system with UvrY; involved in the regulation of carbon metabolism via the csrA/csrB regulatory system; hybrid sensory histidine kinase BarA complement(879700..882420) Serratia proteamaculans 568 5604066 YP_001477025.1 CDS Spro_0791 NC_009832.1 882633 882803 D KEGG: pmy:Pmen_1734 RNA methyltransferase, TrmA family; RNA methyltransferase 882633..882803 Serratia proteamaculans 568 5604056 YP_001477026.1 CDS relA NC_009832.1 882936 885167 D (p)ppGpp synthetase; catalyzes the formation of pppGpp and ppGpp from ATP and GTP or GDP; GDP/GTP pyrophosphokinase 882936..885167 Serratia proteamaculans 568 5604057 YP_001477027.1 CDS mazG NC_009832.1 885228 886022 D functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era; nucleoside triphosphate pyrophosphohydrolase 885228..886022 Serratia proteamaculans 568 5604058 YP_001477028.1 CDS pyrG NC_009832.1 886390 888027 D CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 886390..888027 Serratia proteamaculans 568 5603945 YP_001477029.1 CDS eno NC_009832.1 888109 889404 D enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 888109..889404 Serratia proteamaculans 568 5603946 YP_001477030.1 CDS Spro_0796 NC_009832.1 889719 890909 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pap:PSPA7_2666 hypothetical protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 889719..890909 Serratia proteamaculans 568 5603808 YP_001477031.1 CDS Spro_0797 NC_009832.1 890920 891291 D KEGG: pfl:PFL_1327 hypothetical protein; hypothetical protein 890920..891291 Serratia proteamaculans 568 5603809 YP_001477032.1 CDS Spro_0798 NC_009832.1 891338 892528 D KEGG: pfl:PFL_3514 methionine gamma-lyase; TIGRFAM: methionine gamma-lyase; PFAM: aminotransferase class V; Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; Aluminium resistance family protein; methionine gamma-lyase 891338..892528 Serratia proteamaculans 568 5603810 YP_001477033.1 CDS Spro_0799 NC_009832.1 892579 894102 R KEGG: psb:Psyr_4832 histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase; histidine ammonia-lyase complement(892579..894102) Serratia proteamaculans 568 5603752 YP_001477034.1 CDS Spro_0800 NC_009832.1 894113 894970 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pae:PA5094 putative glycine betaine/proline transport system ATP-binding protein; ABC transporter-like protein complement(894113..894970) Serratia proteamaculans 568 5603753 YP_001477035.1 CDS Spro_0801 NC_009832.1 894976 895821 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pau:PA14_67280 putative amino acid transporter permease protein; binding-protein-dependent transport systems inner membrane component complement(894976..895821) Serratia proteamaculans 568 5603754 YP_001477036.1 CDS Spro_0802 NC_009832.1 895890 896855 R PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: pfo:Pfl_0362 substrate-binding region of ABC-type glycine betaine transport system; glycine betaine ABC transporter substrate-binding protein complement(895890..896855) Serratia proteamaculans 568 5603738 YP_001477037.1 CDS Spro_0803 NC_009832.1 896908 898299 R PFAM: amino acid permease-associated region; KEGG: yen:YE4093 amino acid permease; amino acid permease-associated protein complement(896908..898299) Serratia proteamaculans 568 5603739 YP_001477038.1 CDS Spro_0804 NC_009832.1 898400 899935 R catalyzes the degradation of histidine to urocanate and ammmonia; histidine ammonia-lyase complement(898400..899935) Serratia proteamaculans 568 5603740 YP_001477039.1 CDS Spro_0805 NC_009832.1 899932 901713 R catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism; urocanate hydratase complement(899932..901713) Serratia proteamaculans 568 5603675 YP_001477040.1 CDS Spro_0806 NC_009832.1 901999 902175 R hypothetical protein complement(901999..902175) Serratia proteamaculans 568 5603676 YP_001477041.1 CDS Spro_0807 NC_009832.1 902176 903336 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: reh:H16_B2293 4-hydroxybenzoate transporter, MFS-type AAHS family; major facilitator transporter complement(902176..903336) Serratia proteamaculans 568 5603677 YP_001477042.1 CDS Spro_0808 NC_009832.1 903660 904331 D PFAM: Radical SAM domain protein; KEGG: ypi:YpsIP31758_3313 radical SAM domain protein; radical SAM domain-containing protein 903660..904331 Serratia proteamaculans 568 5603638 YP_001477043.1 CDS Spro_0809 NC_009832.1 904550 904909 R PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: ypi:YpsIP31758_3312 putative 6-pyruvoyl tetrahydrobiopterin synthase; putative 6-pyruvoyl tetrahydropterin synthase complement(904550..904909) Serratia proteamaculans 568 5603639 YP_001477044.1 CDS cysJ NC_009832.1 905347 907146 D catalyzes the reduction of sulfite to sulfide in the biosynthesis of L-cysteine from sulfate; a flavoprotein with flavin reductase activity; sulfite reductase subunit alpha 905347..907146 Serratia proteamaculans 568 5603583 YP_001477045.1 CDS Spro_0811 NC_009832.1 907146 908861 D hemoprotein; NADPH dependent; with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide; sulfite reductase subunit beta 907146..908861 Serratia proteamaculans 568 5603584 YP_001477046.1 CDS Spro_0812 NC_009832.1 908933 909667 D catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite; phosphoadenosine phosphosulfate reductase 908933..909667 Serratia proteamaculans 568 5603585 YP_001477047.1 CDS Spro_0813 NC_009832.1 909713 910039 R KEGG: asa:ASA_P5G104 hypothetical protein; hypothetical protein complement(909713..910039) Serratia proteamaculans 568 5603566 YP_001477048.1 CDS Spro_0814 NC_009832.1 910051 910326 R KEGG: yen:YE0485 hypothetical protein; hypothetical protein complement(910051..910326) Serratia proteamaculans 568 5603567 YP_001477049.1 CDS Spro_0815 NC_009832.1 910418 911491 R catalyzes the sequential removal of 2 amino-terminal arginines from alkaline phosphatase isozyme 1 to form isozymes 2 and 3; alkaline phosphatase isozyme conversion aminopeptidase complement(910418..911491) Serratia proteamaculans 568 5603568 YP_001477050.1 CDS Spro_0816 NC_009832.1 911768 912058 D hypothetical protein 911768..912058 Serratia proteamaculans 568 5603443 YP_001477051.1 CDS Spro_0817 NC_009832.1 912246 913676 D TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: yen:YE0761 siroheme synthase; uroporphyrin-III C-methyltransferase 912246..913676 Serratia proteamaculans 568 5603444 YP_001477052.1 CDS Spro_0818 NC_009832.1 913686 914594 D with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 913686..914594 Serratia proteamaculans 568 5603445 YP_001477053.1 CDS cysN NC_009832.1 914606 916051 D may be GTPase that regulates ATP sulfurylase activity that is involved in converting ATP and sulfate to diphosphate and adenylylsulfate; in Escherichia coli this enzyme functions in cysteine biosynthesis in the first step; forms a heterodimer with CysD; part of the GTP-binding elongation factor family CysN/NodQ; sulfate adenylyltransferase subunit 1 914606..916051 Serratia proteamaculans 568 5603269 YP_001477054.1 CDS Spro_0820 NC_009832.1 916053 916682 D PFAM: adenylylsulfate kinase; KEGG: yps:YPTB0767 adenylylsulfate kinase; adenylyl-sulfate kinase 916053..916682 Serratia proteamaculans 568 5603270 YP_001477055.1 CDS Spro_0821 NC_009832.1 916768 917085 D KEGG: yen:YE0766 hypothetical protein; hypothetical protein 916768..917085 Serratia proteamaculans 568 5603271 YP_001477056.1 CDS Spro_0822 NC_009832.1 917138 917860 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA3539 amino acid ABC transporter, ATP-binding protein; ABC transporter-like protein complement(917138..917860) Serratia proteamaculans 568 5603086 YP_001477057.1 CDS Spro_0823 NC_009832.1 917844 918608 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA3538 amino acid ABC transporter; polar amino acid ABC transporter inner membrane subunit complement(917844..918608) Serratia proteamaculans 568 5603087 YP_001477058.1 CDS Spro_0824 NC_009832.1 918680 919450 R PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: eca:ECA3537 amino acid-binding protein; extracellular solute-binding protein complement(918680..919450) Serratia proteamaculans 568 5603078 YP_001477059.1 CDS ftsB NC_009832.1 919857 920177 D forms a complex with FtsL and FtsQ; colocalizes to the septal region of the dividing cell; membrane protein; cell division protein FtsB 919857..920177 Serratia proteamaculans 568 5603079 YP_001477060.1 CDS Spro_0826 NC_009832.1 920181 920888 D TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: ypi:YpsIP31758_3299 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 920181..920888 Serratia proteamaculans 568 5603080 YP_001477061.1 CDS ispF NC_009832.1 920899 921372 D catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 920899..921372 Serratia proteamaculans 568 5603032 YP_001477062.1 CDS truD NC_009832.1 921377 922423 D catalyzes the modification of U13 in tRNA(Glu); tRNA pseudouridine synthase D 921377..922423 Serratia proteamaculans 568 5603033 YP_001477063.1 CDS surE NC_009832.1 922695 923456 D catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 922695..923456 Serratia proteamaculans 568 5603034 YP_001477064.1 CDS pcm NC_009832.1 923450 924076 D catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins; protein-L-isoaspartate O-methyltransferase 923450..924076 Serratia proteamaculans 568 5602884 YP_001477065.1 CDS nlpD NC_009832.1 924401 925387 D outer membrane lipoprotein involved in stationary-phase cell survival; similar to LppB virulence determinant from Haemophilus somnus; lipoprotein NlpD 924401..925387 Serratia proteamaculans 568 5602885 YP_001477066.1 CDS Spro_0832 NC_009832.1 925441 926439 D sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor controls a regulon of genes required for protection against external stresses; RNA polymerase sigma factor RpoS 925441..926439 Serratia proteamaculans 568 5602886 YP_001477067.1 CDS Spro_0833 NC_009832.1 926520 929075 R This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS complement(926520..929075) Serratia proteamaculans 568 5602830 YP_001477068.1 CDS Spro_0834 NC_009832.1 929828 930208 D catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; involved in N,N'-diacetylchitobiose transport; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake; PTS system N,N'-diacetylchitobiose-specific transporter subunit IIB 929828..930208 Serratia proteamaculans 568 5602831 YP_001477069.1 CDS Spro_0835 NC_009832.1 930220 931581 D catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; involved in N,N'-diacetylchitobiose transport; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake; PTS system N,N'-diacetylchitobiose-specific transporter subunit IIC 930220..931581 Serratia proteamaculans 568 5602832 YP_001477070.1 CDS Spro_0836 NC_009832.1 931630 933015 D PFAM: glycoside hydrolase family 1; KEGG: yen:YE0969 putative glycosyl hydrolase; beta-glucosidase 931630..933015 Serratia proteamaculans 568 5602807 YP_001477071.1 CDS Spro_0837 NC_009832.1 933015 933878 D represses the celABCDF-ydjC operon involved in carbon uptake; DNA-binding transcriptional regulator ChbR 933015..933878 Serratia proteamaculans 568 5602808 YP_001477072.1 CDS Spro_0838 NC_009832.1 934020 934793 D PFAM: YdjC family protein; KEGG: ypi:YpsIP31758_1095 UPF0249 protein ChbG; hypothetical protein 934020..934793 Serratia proteamaculans 568 5602719 YP_001477073.1 CDS Spro_0839 NC_009832.1 934824 936218 R PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE0827 hypothetical protein; major facilitator transporter complement(934824..936218) Serratia proteamaculans 568 5602720 YP_001477074.1 CDS Spro_0840 NC_009832.1 936469 936957 D PFAM: CinA domain protein; KEGG: ypi:YpsIP31758_3241 competence/damage-inducible protein CinA domain protein; competence damage-inducible protein A 936469..936957 Serratia proteamaculans 568 5602721 YP_001477075.1 CDS recA NC_009832.1 937070 938131 D catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 937070..938131 Serratia proteamaculans 568 5602707 YP_001477076.1 CDS recX NC_009832.1 938196 938702 D binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; recombination regulator RecX 938196..938702 Serratia proteamaculans 568 5602708 YP_001477077.1 CDS alaS NC_009832.1 938785 941463 D Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 938785..941463 Serratia proteamaculans 568 5602709 YP_001477078.1 CDS Spro_0844 NC_009832.1 941752 941901 D PFAM: carbon storage regulator; KEGG: plu:plu1251 carbon storage regulator homolog; carbon starvation protein CstA 941752..941901 Serratia proteamaculans 568 5602658 YP_001477079.1 CDS Spro_0845 NC_009832.1 942877 943443 D YqaB; catalyzes the dephosphorylation of fructose 1-phosphate, 6-phosphogluconate and p-nitrophenyl phosphate (pNPP); presents beta-phosphoglucomutase activity at a lower extent; fructose-1-phosphatase 942877..943443 Serratia proteamaculans 568 5607378 YP_001477080.1 CDS Spro_0846 NC_009832.1 943440 943868 D KEGG: yen:YE0837 hypothetical protein; hypothetical protein 943440..943868 Serratia proteamaculans 568 5602660 YP_001477081.1 CDS Spro_0847 NC_009832.1 943951 945513 D involved in the first step of glutathione biosynthesis; glutamate--cysteine ligase 943951..945513 Serratia proteamaculans 568 5602614 YP_001477082.1 CDS Spro_0848 NC_009832.1 945680 946195 D catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2; S-ribosylhomocysteinase 945680..946195 Serratia proteamaculans 568 5602615 YP_001477083.1 CDS Spro_0849 NC_009832.1 946264 947553 R PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: yen:YE0840 hypothetical protein; hypothetical protein complement(946264..947553) Serratia proteamaculans 568 5602616 YP_001477084.1 CDS Spro_0850 NC_009832.1 947594 948448 R PFAM: cytochrome c assembly protein; KEGG: yps:YPTB0832 hypothetical protein; cytochrome c assembly protein complement(947594..948448) Serratia proteamaculans 568 5602612 YP_001477085.1 CDS Spro_0851 NC_009832.1 948555 949916 D with 4.5S RNA forms a signal recognition particle involved in targeting and integration of inner membrane proteins; signal recognition particle protein 948555..949916 Serratia proteamaculans 568 5602613 YP_001477086.1 CDS rpsP NC_009832.1 950133 950381 D binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 950133..950381 Serratia proteamaculans 568 5602494 YP_001477087.1 CDS rimM NC_009832.1 950400 950948 D Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 950400..950948 Serratia proteamaculans 568 5602495 YP_001477088.1 CDS trmD NC_009832.1 951001 951768 D methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 951001..951768 Serratia proteamaculans 568 5602496 YP_001477089.1 CDS rplS NC_009832.1 951823 952179 D this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 951823..952179 Serratia proteamaculans 568 5602473 YP_001477090.1 CDS Spro_0856 NC_009832.1 952334 952552 R PFAM: transcriptional activator Ogr/delta; KEGG: ecv:APECO1_14 Ogr; transcriptional activator Ogr/delta complement(952334..952552) Serratia proteamaculans 568 5602474 YP_001477091.1 CDS Spro_0857 NC_009832.1 952641 953732 R PFAM: late control D family protein; KEGG: yps:YPTB1739 similar to D protein bacteriophage 186 and P2; late control D family protein complement(952641..953732) Serratia proteamaculans 568 5602475 YP_001477092.1 CDS Spro_0858 NC_009832.1 953729 954202 R PFAM: P2 GpU family protein; KEGG: yps:YPTB1740 putative phage tail protein; P2 GpU family protein complement(953729..954202) Serratia proteamaculans 568 5605415 YP_001477093.1 CDS Spro_0859 NC_009832.1 954219 956324 R TIGRFAM: phage tail tape measure protein, TP901 family; KEGG: ent:Ent638_1357 phage tail-like protein; TP901 family phage tail tape measure protein complement(954219..956324) Serratia proteamaculans 568 5605416 YP_001477094.1 CDS Spro_0860 NC_009832.1 956317 956451 R PFAM: P2 GpE family protein; KEGG: kpn:KPN_04861 putative prophage tail protein; P2 GpE family protein complement(956317..956451) Serratia proteamaculans 568 5605417 YP_001477095.1 CDS Spro_0861 NC_009832.1 956472 956759 R PFAM: tail E family protein; KEGG: yps:YPTB1743 putative tail protein gpE P2 bacteriophage; tail E family protein complement(956472..956759) Serratia proteamaculans 568 5603103 YP_001477096.1 CDS Spro_0862 NC_009832.1 956824 957333 R TIGRFAM: phage major tail tube protein; PFAM: major tail tube protein; KEGG: yps:YPTB1744 putative tail tube protein FII (bacteriophage P2); phage major tail tube protein complement(956824..957333) Serratia proteamaculans 568 5603104 YP_001477097.1 CDS Spro_0863 NC_009832.1 957347 958516 R PFAM: tail sheath protein; KEGG: yps:YPTB1745 putative tail sheath protein (P2 and 186 bacteriophage); tail sheath protein complement(957347..958516) Serratia proteamaculans 568 5603105 YP_001477098.1 CDS Spro_0864 NC_009832.1 958660 959214 R PFAM: tail assembly chaperone gp38; KEGG: sgl:SG0710 hypothetical protein; tail assembly chaperone gp38 complement(958660..959214) Serratia proteamaculans 568 5602768 YP_001477099.1 CDS Spro_0865 NC_009832.1 959216 960880 R PFAM: tail fiber repeat 2 protein; KEGG: plu:plu0021 hypothetical protein; tail fiber repeat 2-containing protein complement(959216..960880) Serratia proteamaculans 568 5602769 YP_001477100.1 CDS Spro_0866 NC_009832.1 960877 964170 R TIGRFAM: phage tail protein I; PFAM: tail protein I; KEGG: yen:YE1663 phage tail protein; phage tail protein I complement(960877..964170) Serratia proteamaculans 568 5602582 YP_001477101.1 CDS Spro_0867 NC_009832.1 964163 965071 R PFAM: Baseplate J family protein; KEGG: yps:YPTB1749 probable bacteriophage protein; baseplate J family protein complement(964163..965071) Serratia proteamaculans 568 5602583 YP_001477102.1 CDS Spro_0868 NC_009832.1 965076 965426 R PFAM: GPW/gp25 family protein; KEGG: yps:YPTB1750 possible phage-related protein; GPW/gp25 family protein complement(965076..965426) Serratia proteamaculans 568 5602584 YP_001477103.1 CDS Spro_0869 NC_009832.1 965423 966058 R TIGRFAM: phage baseplate assembly protein V; PFAM: baseplate assembly protein V; KEGG: yps:YPTB1751 putative phage-related baseplate assembly protein; phage baseplate assembly protein V complement(965423..966058) Serratia proteamaculans 568 5602649 YP_001477104.1 CDS Spro_0870 NC_009832.1 966147 966611 R PFAM: P2 phage tail completion R family protein; KEGG: yps:YPTB1850 gpR [Enterobacteria phage P2]; P2 phage tail completion R family protein complement(966147..966611) Serratia proteamaculans 568 5602650 YP_001477105.1 CDS Spro_0871 NC_009832.1 966651 967163 R PFAM: glycoside hydrolase family 24; KEGG: yps:YPTB1755 putative phage lysozyme; glycoside hydrolase family protein complement(966651..967163) Serratia proteamaculans 568 5602651 YP_001477106.1 CDS Spro_0872 NC_009832.1 967147 967365 R KEGG: yps:YPTB1756 putative prophage Hp1 family holin; prophage Hp1 family holin complement(967147..967365) Serratia proteamaculans 568 5602567 YP_001477107.1 CDS Spro_0873 NC_009832.1 967369 967572 R PFAM: tail X family protein; KEGG: yps:YPTB1757 putative phage-related tail protein; tail X family protein complement(967369..967572) Serratia proteamaculans 568 5602568 YP_001477108.1 CDS Spro_0874 NC_009832.1 968036 970099 R PFAM: replication gene A; KEGG: ecv:APECO1_4464 putative phage replication initiation protein; replication gene A complement(968036..970099) Serratia proteamaculans 568 5602569 YP_001477109.1 CDS Spro_0875 NC_009832.1 970104 970325 R TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family; PFAM: zinc finger DksA/TraR C4-type; KEGG: yen:YE1687 hypothetical 8.2 kDa protein in gpa 5'region; TraR/DksA family transcriptional regulator complement(970104..970325) Serratia proteamaculans 568 5602710 YP_001477110.1 CDS Spro_0876 NC_009832.1 970400 970705 R KEGG: yps:YPTB1768 similar to gpB bacteriophage P2; gpB bacteriophage P2-like protein complement(970400..970705) Serratia proteamaculans 568 5602711 YP_001477111.1 CDS Spro_0877 NC_009832.1 970971 971837 D PFAM: CI repressor; KEGG: ecc:c0934 hypothetical protein; CI repressor 970971..971837 Serratia proteamaculans 568 5602712 YP_001477112.1 CDS Spro_0878 NC_009832.1 971892 972656 R PFAM: protein of unknown function DUF481; KEGG: ypi:YpsIP31758_3223 hypothetical protein; hypothetical protein complement(971892..972656) Serratia proteamaculans 568 5602519 YP_001477113.1 CDS Spro_0879 NC_009832.1 973241 974314 D catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, tyrosine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 973241..974314 Serratia proteamaculans 568 5602520 YP_001477114.1 CDS tyrA NC_009832.1 974321 975442 D catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis; bifunctional chorismate mutase/prephenate dehydrogenase 974321..975442 Serratia proteamaculans 568 5602521 YP_001477115.1 CDS pheA NC_009832.1 975484 976641 R catalyzing the formation of prephenate from chorismate and the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis; bifunctional chorismate mutase/prephenate dehydratase complement(975484..976641) Serratia proteamaculans 568 5602930 YP_001477116.1 CDS Spro_0882 NC_009832.1 976933 977274 R TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: ypi:YpsIP31758_3216 ribosomal subunit interface protein; sigma 54 modulation protein/30S ribosomal protein S30EA complement(976933..977274) Serratia proteamaculans 568 5602931 YP_001477117.1 CDS Spro_0883 NC_009832.1 977587 978318 R with YaeT, NlpB and YfgL forms a complex involved in the proper assembly and/or targeting of OMPs to the outer membrane; involved in resistance to ampicillin and tetracycline; outer membrane protein assembly complex subunit YfiO complement(977587..978318) Serratia proteamaculans 568 5602953 YP_001477118.1 CDS rluD NC_009832.1 978450 979427 D responsible for synthesis of pseudouridine from uracil at positions 1911, 1915 and 1917 in 23S ribosomal RNA; 23S rRNA pseudouridine synthase D 978450..979427 Serratia proteamaculans 568 5602954 YP_001477119.1 CDS Spro_0885 NC_009832.1 979427 980158 D PFAM: protein of unknown function DUF152; KEGG: yen:YE0892 hypothetical protein; hypothetical protein 979427..980158 Serratia proteamaculans 568 5602955 YP_001477120.1 CDS Spro_0886 NC_009832.1 980289 982862 D PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: yen:YE0893 Clp ATPase; protein disaggregation chaperone 980289..982862 Serratia proteamaculans 568 5603145 YP_001477121.1 CDS Spro_0887 NC_009832.1 988922 989323 R KEGG: yen:YE0895 putative lipoprotein; putative lipoprotein complement(988922..989323) Serratia proteamaculans 568 5607143 YP_001477122.1 CDS Spro_0888 NC_009832.1 989633 990313 D KEGG: yen:YE0896 hypothetical protein; hypothetical protein 989633..990313 Serratia proteamaculans 568 5603147 YP_001477123.1 CDS Spro_0889 NC_009832.1 990313 991131 D PFAM: phospholipid/glycerol acyltransferase; KEGG: yen:YE0897 putative acyltransferase; phospholipid/glycerol acyltransferase 990313..991131 Serratia proteamaculans 568 5603382 YP_001477124.1 CDS Spro_0890 NC_009832.1 991121 991396 D KEGG: yen:YE0898 putative acyl carrier protein; putative acyl carrier protein 991121..991396 Serratia proteamaculans 568 5603383 YP_001477125.1 CDS Spro_0891 NC_009832.1 991406 991657 D carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 991406..991657 Serratia proteamaculans 568 5603384 YP_001477126.1 CDS Spro_0892 NC_009832.1 991700 992257 D KEGG: yen:YE0900 putative inner membrane protein; hypothetical protein 991700..992257 Serratia proteamaculans 568 5603470 YP_001477127.1 CDS Spro_0893 NC_009832.1 992224 993597 D KEGG: yen:YE0901 putative AMP-binding protein; putative AMP-binding protein 992224..993597 Serratia proteamaculans 568 5603471 YP_001477128.1 CDS Spro_0894 NC_009832.1 993594 993938 D PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: yen:YE0902 putative dehydratase; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ 993594..993938 Serratia proteamaculans 568 5603472 YP_001477129.1 CDS Spro_0895 NC_009832.1 993929 995647 D PFAM: glycosyl transferase family 2; KEGG: yen:YE0903 putative bifunctional glycosyl transferase/acyl transferase; glycosyl transferase family protein 993929..995647 Serratia proteamaculans 568 5603488 YP_001477130.1 CDS Spro_0896 NC_009832.1 995644 996072 D PFAM: thioesterase superfamily protein; KEGG: yen:YE0904 putative thioesterase; thioesterase superfamily protein 995644..996072 Serratia proteamaculans 568 5603489 YP_001477131.1 CDS Spro_0897 NC_009832.1 996069 996674 D KEGG: yen:YE0905 putative outer-membrane lipoprotein carrier protein; putative outer-membrane lipoprotein carrier protein 996069..996674 Serratia proteamaculans 568 5603490 YP_001477132.1 CDS Spro_0898 NC_009832.1 996664 998970 D KEGG: yen:YE0906 putative inner membrane protein; hypothetical protein 996664..998970 Serratia proteamaculans 568 5603514 YP_001477133.1 CDS Spro_0899 NC_009832.1 998970 999542 D KEGG: yen:YE0907 putative lipoprotein; putative lipoprotein 998970..999542 Serratia proteamaculans 568 5603515 YP_001477134.1 CDS Spro_0900 NC_009832.1 999542 1000711 D FabB; beta-ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase I 999542..1000711 Serratia proteamaculans 568 5602996 YP_001477135.1 CDS Spro_0901 NC_009832.1 1000708 1001181 D PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: yen:YE0909 putative dehydratase; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ 1000708..1001181 Serratia proteamaculans 568 5602997 YP_001477136.1 CDS fabG NC_009832.1 1001178 1001909 D Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-(acyl-carrier-protein) reductase 1001178..1001909 Serratia proteamaculans 568 5602998 YP_001477137.1 CDS Spro_0903 NC_009832.1 1001906 1003135 D FabB; beta-ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II 1001906..1003135 Serratia proteamaculans 568 5603646 YP_001477138.1 CDS dkgB NC_009832.1 1003277 1004080 D catalyzes the reduction of 2,5-diketo-D-gluconic acid to 2-keto-L-gulonic acid; 2,5-diketo-D-gluconate reductase B 1003277..1004080 Serratia proteamaculans 568 5603647 YP_001477139.1 CDS Spro_0905 NC_009832.1 1004125 1005012 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: yen:YE0914 putative LysR-family transcriptional regulatory protein; LysR family transcriptional regulator complement(1004125..1005012) Serratia proteamaculans 568 5603648 YP_001477140.1 CDS Spro_0906 NC_009832.1 1005118 1006293 D PFAM: major facilitator superfamily MFS_1; KEGG: kpn:KPN_00223 putative drug efflux protein; major facilitator transporter 1005118..1006293 Serratia proteamaculans 568 5603761 YP_001477141.1 CDS Spro_0907 NC_009832.1 1006557 1007330 D PFAM: Endonuclease/exonuclease/phosphatase; KEGG: sgl:SG0587 hypothetical protein; hypothetical protein 1006557..1007330 Serratia proteamaculans 568 5603762 YP_001477142.1 CDS mltD NC_009832.1 1007395 1008822 R catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues; may play a role in recycling muropeptides during cell division and/or cell elongation; in Helicobacter pylori MltD is a endolytic transglycosylase involved mainly in the rearrangement of the peptidoglycan layer of the bacterial cell wall; membrane-bound lytic murein transglycosylase D complement(1007395..1008822) Serratia proteamaculans 568 5603763 YP_001477143.1 CDS Spro_0909 NC_009832.1 1008855 1009610 R PFAM: beta-lactamase domain protein; KEGG: ypi:YpsIP31758_1052 metallo-beta-lactamase family protein; hydroxyacylglutathione hydrolase complement(1008855..1009610) Serratia proteamaculans 568 5603796 YP_001477144.1 CDS Spro_0910 NC_009832.1 1009655 1010374 D PFAM: Methyltransferase type 11; KEGG: yen:YE0920 hypothetical protein; type 11 methyltransferase 1009655..1010374 Serratia proteamaculans 568 5603797 YP_001477145.1 CDS Spro_0911 NC_009832.1 1010371 1010838 R PFAM: ribonuclease H; KEGG: ypi:YpsIP31758_1054 RNase H; ribonuclease H complement(1010371..1010838) Serratia proteamaculans 568 5603798 YP_001477146.1 CDS Spro_0912 NC_009832.1 1010911 1011651 D 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 1010911..1011651 Serratia proteamaculans 568 5603971 YP_001477147.1 CDS Spro_0913 NC_009832.1 1011921 1013381 R PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: kpn:KPN_01790 putative allantoin permease; cytosine/purines uracil thiamine allantoin permease complement(1011921..1013381) Serratia proteamaculans 568 5605918 YP_001477148.1 CDS Spro_0914 NC_009832.1 1013548 1014297 D PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: kpn:KPN_01789 hypothetical transcriptional regulator; GntR family transcriptional regulator 1013548..1014297 Serratia proteamaculans 568 5603973 YP_001477149.1 CDS Spro_0915 NC_009832.1 1014294 1015037 D PFAM: Asp/Glu racemase; KEGG: kpn:KPN_01788 putative hydantoin racemase; Asp/Glu racemase 1014294..1015037 Serratia proteamaculans 568 5604304 YP_001477150.1 CDS Spro_0916 NC_009832.1 1015058 1015996 D PFAM: polysaccharide deacetylase; KEGG: ypi:YpsIP31758_1058 polysaccharide deacetylase family protein; chitin deacetylase 1015058..1015996 Serratia proteamaculans 568 5604305 YP_001477151.1 CDS Spro_0917 NC_009832.1 1016024 1016353 R KEGG: nmu:Nmul_D2814 transcriptional regulator, XRE family; XRE family transcriptional regulator complement(1016024..1016353) Serratia proteamaculans 568 5604390 YP_001477152.1 CDS Spro_0918 NC_009832.1 1016515 1018755 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ypi:YpsIP31758_0710 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor complement(1016515..1018755) Serratia proteamaculans 568 5604391 YP_001477153.1 CDS Spro_0919 NC_009832.1 1018789 1020117 R KEGG: ypi:YpsIP31758_0711 aerobactin siderophore biosynthesis protein IucD; L-lysine 6-monooxygenase (NADPH) complement(1018789..1020117) Serratia proteamaculans 568 5604392 YP_001477154.1 CDS Spro_0920 NC_009832.1 1020114 1021862 R PFAM: IucA/IucC family protein; KEGG: ypp:YPDSF_0526 siderophore biosynthesis protein IucC; IucA/IucC family protein complement(1020114..1021862) Serratia proteamaculans 568 5604454 YP_001477155.1 CDS Spro_0921 NC_009832.1 1021859 1022809 R KEGG: ypi:YpsIP31758_0713 aerobactin siderophore biosynthesis protein IucB; aerobactin siderophore biosynthesis protein IucB complement(1021859..1022809) Serratia proteamaculans 568 5604455 YP_001477156.1 CDS Spro_0922 NC_009832.1 1022806 1024551 R PFAM: IucA/IucC family protein; KEGG: ypi:YpsIP31758_0714 aerobactin siderophore biosynthesis protein IucA; IucA/IucC family protein complement(1022806..1024551) Serratia proteamaculans 568 5604456 YP_001477157.1 CDS Spro_0923 NC_009832.1 1024689 1025912 D PFAM: major facilitator superfamily MFS_1; KEGG: ypp:YPDSF_0530 membrane protein; major facilitator transporter 1024689..1025912 Serratia proteamaculans 568 5603075 YP_001477158.1 CDS Spro_0924 NC_009832.1 1025918 1026802 D PFAM: Siderophore-interacting protein; FAD-binding 9 siderophore-interacting domain protein; KEGG: eca:ECA0065 hypothetical protein; FAD-binding 9 siderophore-interacting domain-containing protein 1025918..1026802 Serratia proteamaculans 568 5603076 YP_001477159.1 CDS Spro_0925 NC_009832.1 1026812 1027102 R PFAM: plasmid stabilization system; KEGG: plu:plu2306 hypothetical protein; plasmid stabilization system protein complement(1026812..1027102) Serratia proteamaculans 568 5603077 YP_001477160.1 CDS Spro_0926 NC_009832.1 1027090 1027368 R PFAM: CopG domain protein DNA-binding domain protein; KEGG: plu:plu2305 hypothetical protein; CopG family transcriptional regulator complement(1027090..1027368) Serratia proteamaculans 568 5604619 YP_001477161.1 CDS Spro_0927 NC_009832.1 1027454 1027840 R KEGG: ypi:YpsIP31758_3195 hypothetical protein; hypothetical protein complement(1027454..1027840) Serratia proteamaculans 568 5604620 YP_001477162.1 CDS Spro_0928 NC_009832.1 1027844 1029244 R catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase complement(1027844..1029244) Serratia proteamaculans 568 5604621 YP_001477163.1 CDS Spro_0929 NC_009832.1 1029241 1029432 R KEGG: ypi:YpsIP31758_3193 hypothetical protein; hypothetical protein complement(1029241..1029432) Serratia proteamaculans 568 5603553 YP_001477164.1 CDS Spro_0930 NC_009832.1 1029458 1031044 R PFAM: gamma-glutamyltranspeptidase; KEGG: eca:ECA3497 putative gamma-glutamyltranspeptidase; gamma-glutamyltransferase complement(1029458..1031044) Serratia proteamaculans 568 5603554 YP_001477165.1 CDS Spro_0931 NC_009832.1 1031190 1032029 D PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: eca:ECA3496 putative transcriptional regulator; RpiR family transcriptional regulator 1031190..1032029 Serratia proteamaculans 568 5603555 YP_001477166.1 CDS Spro_0932 NC_009832.1 1032248 1033039 D PFAM: extracellular solute-binding protein family 3; KEGG: ypi:YpsIP31758_3190 amino acid ABC transporter, periplasmic amino acid-binding protein; extracellular solute-binding protein 1032248..1033039 Serratia proteamaculans 568 5604867 YP_001477167.1 CDS Spro_0933 NC_009832.1 1033052 1033717 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA3494 putative amino acid ABC transporter, permease protein; polar amino acid ABC transporter inner membrane subunit 1033052..1033717 Serratia proteamaculans 568 5604868 YP_001477168.1 CDS Spro_0934 NC_009832.1 1033717 1034373 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypi:YpsIP31758_3188 amino acid ABC transporter, permease protein; polar amino acid ABC transporter inner membrane subunit 1033717..1034373 Serratia proteamaculans 568 5604969 YP_001477169.1 CDS Spro_0935 NC_009832.1 1034354 1035097 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA3492 putative amino acid ABC transporter, ATP-binding protein; ABC transporter-like protein 1034354..1035097 Serratia proteamaculans 568 5604970 YP_001477170.1 CDS Spro_0936 NC_009832.1 1035141 1036382 D PFAM: aminotransferase class V; KEGG: eca:ECA3491 purine catabolism protein; class V aminotransferase 1035141..1036382 Serratia proteamaculans 568 5604971 YP_001477171.1 CDS Spro_0937 NC_009832.1 1036382 1037638 D allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase 1036382..1037638 Serratia proteamaculans 568 5604978 YP_001477172.1 CDS Spro_0938 NC_009832.1 1037638 1038138 D KEGG: nca:Noca_1144 putative urate oxidase, N-terminal; putative urate oxidase, N-terminal 1037638..1038138 Serratia proteamaculans 568 5604979 YP_001477173.1 CDS Spro_0939 NC_009832.1 1038131 1038466 D PFAM: Transthyretin; KEGG: sen:SACE_6735 transthyretin; transthyretin 1038131..1038466 Serratia proteamaculans 568 5604980 YP_001477174.1 CDS Spro_0940 NC_009832.1 1038512 1039285 R PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: ypi:YpsIP31758_3184 hydrolase, carbon-nitrogen family; hypothetical protein complement(1038512..1039285) Serratia proteamaculans 568 5605017 YP_001477175.1 CDS Spro_0941 NC_009832.1 1039273 1040433 R catalyzes the transfer of an amino moiety; putative aminotransferase complement(1039273..1040433) Serratia proteamaculans 568 5605018 YP_001477176.1 CDS Spro_0942 NC_009832.1 1040588 1041208 D catalyzes the formation of diketo methylthiopentyl phosphate from methylribulose phosphate in the methionine salvage pathway; methylthioribulose-1-phosphate dehydratase 1040588..1041208 Serratia proteamaculans 568 5605019 YP_001477177.1 CDS Spro_0943 NC_009832.1 1041205 1041894 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: eca:ECA3486 enolase-phosphatase; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 1041205..1041894 Serratia proteamaculans 568 5605062 YP_001477178.1 CDS Spro_0944 NC_009832.1 1041891 1042433 D PFAM: Acireductone dioxygenase ARD; KEGG: yen:YE3231 dioxygenase; acireductone dioxygenase ARD 1041891..1042433 Serratia proteamaculans 568 5605063 YP_001477179.1 CDS Spro_0945 NC_009832.1 1042451 1043479 R KEGG: eca:ECA3477 methylthioribose-1-phosphate isomerase; TIGRFAM: eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: initiation factor 2B related; eIF-2B alpha/beta/delta-like protein complement(1042451..1043479) Serratia proteamaculans 568 5605064 YP_001477180.1 CDS mtnK NC_009832.1 1043623 1044822 D phosphorylates methylthioribose to form methylthioribose-1-phosphate; involved in methionine salvage pathway; methylthioribose kinase 1043623..1044822 Serratia proteamaculans 568 5603764 YP_001477181.1 CDS Spro_0947 NC_009832.1 1044908 1045060 R PFAM: Hok/gef cell toxic protein; KEGG: sty:HCM1.290c putative stable plasmid inheritance protein; Hok/gef cell toxic protein complement(1044908..1045060) Serratia proteamaculans 568 5603765 YP_001477182.1 CDS Spro_0948 NC_009832.1 1045412 1045564 R PFAM: Hok/gef cell toxic protein; KEGG: sty:HCM1.290c putative stable plasmid inheritance protein; Hok/gef cell toxic protein complement(1045412..1045564) Serratia proteamaculans 568 5603766 YP_001477183.1 CDS fadE NC_009832.1 1045853 1048309 R functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; acyl-CoA dehydrogenase complement(1045853..1048309) Serratia proteamaculans 568 5605087 YP_001477184.1 CDS gmhA NC_009832.1 1048555 1049136 D catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate; phosphoheptose isomerase 1048555..1049136 Serratia proteamaculans 568 5605088 YP_001477185.1 CDS Spro_0951 NC_009832.1 1049234 1050040 D PFAM: glutamine amidotransferase class-II; KEGG: yps:YPTB0885 hypothetical protein; glutamine amidotransferase class-II 1049234..1050040 Serratia proteamaculans 568 5603694 YP_001477186.1 CDS Spro_0952 NC_009832.1 1049972 1050742 R PFAM: protein of unknown function DUF949; KEGG: ypi:YpsIP31758_3169 hypothetical protein; hypothetical protein complement(1049972..1050742) Serratia proteamaculans 568 5603695 YP_001477187.1 CDS Spro_0953 NC_009832.1 1051227 1052576 D uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit A 1051227..1052576 Serratia proteamaculans 568 5603696 YP_001477188.1 CDS Spro_0954 NC_009832.1 1052580 1053821 D uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit B 1052580..1053821 Serratia proteamaculans 568 5604169 YP_001477189.1 CDS Spro_0955 NC_009832.1 1053811 1054605 D uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit C 1053811..1054605 Serratia proteamaculans 568 5604170 YP_001477190.1 CDS Spro_0956 NC_009832.1 1054598 1055227 D Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit D 1054598..1055227 Serratia proteamaculans 568 5604171 YP_001477191.1 CDS Spro_0957 NC_009832.1 1055234 1055830 D Part of the NQR complex which consists of NqrA, NqrB, NqrC, NqrD, NqrE and NqrF; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; NqrE is probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.; Na(+)-translocating NADH-quinone reductase subunit E 1055234..1055830 Serratia proteamaculans 568 5605181 YP_001477192.1 CDS Spro_0958 NC_009832.1 1055846 1057069 D uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit F 1055846..1057069 Serratia proteamaculans 568 5605182 YP_001477193.1 CDS Spro_0959 NC_009832.1 1057070 1058101 D PFAM: ApbE family lipoprotein; KEGG: yen:YE3214 thiamine biosynthesis lipoprotein; ApbE family lipoprotein 1057070..1058101 Serratia proteamaculans 568 5605183 YP_001477194.1 CDS Spro_0960 NC_009832.1 1058109 1058336 D PFAM: protein of unknown function DUF539; KEGG: yen:YE3213 hypothetical protein; hypothetical protein 1058109..1058336 Serratia proteamaculans 568 5605307 YP_001477195.1 CDS Spro_0961 NC_009832.1 1058384 1059268 R PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: kpn:KPN_00246 hypothetical protein; glycerophosphoryl diester phosphodiesterase complement(1058384..1059268) Serratia proteamaculans 568 5605308 YP_001477196.1 CDS Spro_0962 NC_009832.1 1059466 1060527 D involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV 1059466..1060527 Serratia proteamaculans 568 5605309 YP_001477197.1 CDS Spro_0963 NC_009832.1 1060583 1062043 R KEGG: yen:YE3206 aminoacyl-histidine dipeptidase; TIGRFAM: aminoacyl-histidine dipeptidase; PFAM: peptidase M20; peptidase dimerisation domain protein; aminoacyl-histidine dipeptidase complement(1060583..1062043) Serratia proteamaculans 568 5603112 YP_001477198.1 CDS Spro_0964 NC_009832.1 1062368 1062826 D catalyzes the conversion of guanine, xanthine and, to a lesser extent, hypoxanthine to GMP, XMP and IMP, respectively; xanthine-guanine phosphoribosyltransferase 1062368..1062826 Serratia proteamaculans 568 5603113 YP_001477199.1 CDS frsA NC_009832.1 1063004 1064251 D forms a 1:1 complex with the unphosphorylated from of enzyme IIAGlc; FrsA may promote fermentation; fermentation/respiration switch protein 1063004..1064251 Serratia proteamaculans 568 5603114 YP_001477200.1 CDS Spro_0966 NC_009832.1 1064311 1064712 D involved in the expression of csgBA which is involved in curli formation; interacts with sigmaS; DNA-binding transcriptional regulator Crl 1064311..1064712 Serratia proteamaculans 568 5603744 YP_001477201.1 CDS Spro_0967 NC_009832.1 1064828 1065931 D catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 1064828..1065931 Serratia proteamaculans 568 5603745 YP_001477202.1 CDS proA NC_009832.1 1065941 1067194 D Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 1065941..1067194 Serratia proteamaculans 568 5605339 YP_001477203.1 CDS Spro_0969 NC_009832.1 1067412 1067882 R PFAM: GCN5-related N-acetyltransferase; KEGG: stm:STM3653 putative acetyltransferase; GCN5-like N-acetyltransferase complement(1067412..1067882) Serratia proteamaculans 568 5605340 YP_001477204.1 CDS Spro_0970 NC_009832.1 1068134 1068373 R hypothetical protein complement(1068134..1068373) Serratia proteamaculans 568 5605341 YP_001477205.1 CDS Spro_0971 NC_009832.1 1068535 1069074 R KEGG: eca:ECA3962 hypothetical protein; hypothetical protein complement(1068535..1069074) Serratia proteamaculans 568 5603005 YP_001477206.1 CDS Spro_0972 NC_009832.1 1069458 1069982 R PFAM: cytochrome B561; KEGG: eca:ECA0823 cytochrome B561; cytochrome B561 complement(1069458..1069982) Serratia proteamaculans 568 5603006 YP_001477207.1 CDS Spro_0973 NC_009832.1 1070100 1071698 R PFAM: extracellular solute-binding protein family 5; KEGG: kpn:KPN_01918 dipeptide transport protein; extracellular solute-binding protein complement(1070100..1071698) Serratia proteamaculans 568 5603007 YP_001477208.1 CDS Spro_0974 NC_009832.1 1072185 1073531 D PFAM: condensation domain protein; KEGG: bme:BMEII0076 enterobactin synthetase component F; condensation domain-containing protein 1072185..1073531 Serratia proteamaculans 568 5605398 YP_001477209.1 CDS Spro_0977 NC_009832.1 1078899 1081022 D TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: vvy:VVA1309 ferric vulnibactin outer membrane receptor; TonB-dependent siderophore receptor 1078899..1081022 Serratia proteamaculans 568 5605400 YP_001477210.1 CDS Spro_0978 NC_009832.1 1081087 1084047 D PFAM: condensation domain protein; phosphopantetheine-binding; KEGG: vvu:VV2_0830 non-ribosomal peptide synthetase modules; condensation domain-containing protein 1081087..1084047 Serratia proteamaculans 568 5605435 YP_001477211.1 CDS Spro_0979 NC_009832.1 1084094 1085326 D KEGG: kpn:KPN_01908 putative receptor; hypothetical protein 1084094..1085326 Serratia proteamaculans 568 5605436 YP_001477212.1 CDS Spro_0980 NC_009832.1 1085532 1086116 D PFAM: flavin reductase domain protein FMN-binding; KEGG: ent:Ent638_2072 flavin reductase domain protein, FMN-binding; flavin reductase domain-containing protein 1085532..1086116 Serratia proteamaculans 568 5605437 YP_001477213.1 CDS Spro_0981 NC_009832.1 1086201 1086554 R hypothetical protein complement(1086201..1086554) Serratia proteamaculans 568 5605506 YP_001477214.1 CDS Spro_0982 NC_009832.1 1086781 1087029 R hypothetical protein complement(1086781..1087029) Serratia proteamaculans 568 5605507 YP_001477215.1 CDS Spro_0983 NC_009832.1 1087251 1087892 D PFAM: DSBA oxidoreductase; KEGG: sgl:SG2236 thiol:disulfide interchange protein; DSBA oxidoreductase 1087251..1087892 Serratia proteamaculans 568 5605508 YP_001477216.1 CDS Spro_0984 NC_009832.1 1088084 1088992 D activator of genes involved in phenylacetic acid catabolism; DNA-binding transcriptional activator FeaR 1088084..1088992 Serratia proteamaculans 568 5605626 YP_001477217.1 CDS Spro_0985 NC_009832.1 1089029 1090528 R PFAM: aldehyde dehydrogenase; KEGG: kpn:KPN_01455 phenylacetaldehyde dehydrogenase; phenylacetaldehyde dehydrogenase complement(1089029..1090528) Serratia proteamaculans 568 5605627 YP_001477218.1 CDS Spro_0986 NC_009832.1 1090673 1091350 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: aha:AHA_0057 lysine exporter protein; leucine export protein LeuE complement(1090673..1091350) Serratia proteamaculans 568 5605651 YP_001477219.1 CDS Spro_0987 NC_009832.1 1091465 1092325 R with TehA confers resistance to tellurite; tellurite resistance protein TehB complement(1091465..1092325) Serratia proteamaculans 568 5605652 YP_001477220.1 CDS Spro_0988 NC_009832.1 1092532 1093635 D PFAM: protein of unknown function DUF1615; KEGG: eca:ECA0433 putative lipoprotein; hypothetical protein 1092532..1093635 Serratia proteamaculans 568 5605653 YP_001477221.1 CDS Spro_0989 NC_009832.1 1093632 1094240 R PFAM: Glutathione S-transferase domain; KEGG: bxe:Bxe_A4031 putative glutathione S-transferase; glutathione S-transferase domain-containing protein complement(1093632..1094240) Serratia proteamaculans 568 5604289 YP_001477222.1 CDS Spro_0990 NC_009832.1 1094256 1095152 R PFAM: alpha/beta hydrolase fold; KEGG: sen:SACE_1904 alpha/beta hydrolase; alpha/beta hydrolase fold domain-containing protein complement(1094256..1095152) Serratia proteamaculans 568 5604290 YP_001477223.1 CDS Spro_0991 NC_009832.1 1095181 1096089 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rsq:Rsph17025_3347 hypothetical protein; LysR family transcriptional regulator 1095181..1096089 Serratia proteamaculans 568 5604291 YP_001477224.1 CDS Spro_0992 NC_009832.1 1096106 1097782 R PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: bxe:Bxe_B0109 putative pyruvate decarboxylase; thiamine pyrophosphate binding domain-containing protein complement(1096106..1097782) Serratia proteamaculans 568 5605833 YP_001477225.1 CDS pagP NC_009832.1 1098585 1099178 D catalyzes the transfer of palmitate to lipid A; palmitoyl transferase 1098585..1099178 Serratia proteamaculans 568 5605834 YP_001477226.1 CDS Spro_0994 NC_009832.1 1099415 1099900 D KEGG: yen:YE0521 hypothetical protein; hypothetical protein 1099415..1099900 Serratia proteamaculans 568 5605835 YP_001477227.1 CDS Spro_0995 NC_009832.1 1099960 1100223 D PFAM: protein of unknown function DUF333; KEGG: sfx:S1546 hypothetical protein; hypothetical protein 1099960..1100223 Serratia proteamaculans 568 5605940 YP_001477228.1 CDS Spro_0996 NC_009832.1 1100233 1100850 R KEGG: psb:Psyr_4917 heat shock protein DnaJ, N-terminal; hypothetical protein complement(1100233..1100850) Serratia proteamaculans 568 5605941 YP_001477229.1 CDS Spro_0997 NC_009832.1 1101074 1101886 D PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: rsp:RSP_3064 transcriptional regulator, DeoR family; DeoR family transcriptional regulator 1101074..1101886 Serratia proteamaculans 568 5605942 YP_001477230.1 CDS Spro_0998 NC_009832.1 1101888 1102271 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ent:Ent638_0487 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 1101888..1102271 Serratia proteamaculans 568 5605988 YP_001477231.1 CDS Spro_0999 NC_009832.1 1102272 1103180 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_B1922 transcriptional regulator, LysR-family; LysR family transcriptional regulator complement(1102272..1103180) Serratia proteamaculans 568 5605989 YP_001477232.1 CDS Spro_1000 NC_009832.1 1103307 1104188 D PFAM: Pirin domain protein; KEGG: bte:BTH_I1747 pirin family protein; pirin domain-containing protein 1103307..1104188 Serratia proteamaculans 568 5605990 YP_001477233.1 CDS Spro_1001 NC_009832.1 1104328 1104954 D PFAM: isochorismatase hydrolase; KEGG: pfl:PFL_4072 hydrolase, isochorismatase family; isochorismatase hydrolase 1104328..1104954 Serratia proteamaculans 568 5602629 YP_001477234.1 CDS Spro_1002 NC_009832.1 1105129 1105461 D KEGG: kpn:KPN_02155 hypothetical protein; hypothetical protein 1105129..1105461 Serratia proteamaculans 568 5602630 YP_001477235.1 CDS Spro_1003 NC_009832.1 1105525 1105968 D PFAM: putative thiol-disulphide oxidoreductase DCC; KEGG: pfl:PFL_2261 protein of unknown function, DUF393 family; putative thiol-disulfide oxidoreductase DCC 1105525..1105968 Serratia proteamaculans 568 5606112 YP_001477236.1 CDS Spro_1004 NC_009832.1 1106064 1106321 D KEGG: ypi:YpsIP31758_3147 hypothetical protein; hypothetical protein 1106064..1106321 Serratia proteamaculans 568 5606113 YP_001477237.1 CDS Spro_1005 NC_009832.1 1106315 1106866 R PFAM: GCN5-related N-acetyltransferase; KEGG: pfl:PFL_3320 acetyltransferase, GNAT family; GCN5-like N-acetyltransferase complement(1106315..1106866) Serratia proteamaculans 568 5606114 YP_001477238.1 CDS Spro_1006 NC_009832.1 1106967 1107719 R KEGG: pap:PSPA7_1156 hypothetical protein; putative periplasmic ligand-binding sensor protein complement(1106967..1107719) Serratia proteamaculans 568 5606174 YP_001477239.1 CDS Spro_1007 NC_009832.1 1107846 1108700 R SMART: helix-turn-helix domain protein; KEGG: eca:ECA3469 putative DNA-binding protein; XRE family transcriptional regulator complement(1107846..1108700) Serratia proteamaculans 568 5606175 YP_001477240.1 CDS Spro_1008 NC_009832.1 1108749 1109519 D PFAM: UbiE/COQ5 methyltransferase; methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; KEGG: yen:YE3193 hypothetical protein; type 11 methyltransferase 1108749..1109519 Serratia proteamaculans 568 5606176 YP_001477241.1 CDS Spro_1009 NC_009832.1 1109619 1110314 R porin involved in osmoregulation allowing water to move into and out of the cell in response to osmotic pressure; aquaporin Z complement(1109619..1110314) Serratia proteamaculans 568 5606198 YP_001477242.1 CDS Spro_1010 NC_009832.1 1110764 1112128 D KEGG: eca:ECA0924 hypothetical protein; hypothetical protein 1110764..1112128 Serratia proteamaculans 568 5606199 YP_001477243.1 CDS Spro_1011 NC_009832.1 1112389 1113570 R PFAM: low temperature requirement A; KEGG: oan:Oant_2126 low temperature requirement A; low temperature requirement A complement(1112389..1113570) Serratia proteamaculans 568 5606200 YP_001477244.1 CDS Spro_1012 NC_009832.1 1113880 1114164 D PFAM: protein of unknown function DUF1471; KEGG: yen:YE3192 hypothetical protein; hypothetical protein 1113880..1114164 Serratia proteamaculans 568 5606207 YP_001477245.1 CDS Spro_1013 NC_009832.1 1114406 1114963 D KEGG: ypp:YPDSF_2845 methyltransferase; methyltransferase 1114406..1114963 Serratia proteamaculans 568 5606208 YP_001477246.1 CDS Spro_1014 NC_009832.1 1114964 1115425 R PFAM: GCN5-related N-acetyltransferase; KEGG: oan:Oant_1313 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase complement(1114964..1115425) Serratia proteamaculans 568 5606209 YP_001477247.1 CDS Spro_1015 NC_009832.1 1115646 1116761 D PFAM: periplasmic binding protein; KEGG: yen:YE3190 hypothetical protein; periplasmic binding protein 1115646..1116761 Serratia proteamaculans 568 5606224 YP_001477248.1 CDS Spro_1016 NC_009832.1 1116754 1118877 D TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: yen:YE3189 putative hydroxamate-type ferrisiderophore receptor; TonB-dependent siderophore receptor 1116754..1118877 Serratia proteamaculans 568 5606225 YP_001477249.1 CDS Spro_1017 NC_009832.1 1118967 1119485 D PFAM: GCN5-related N-acetyltransferase; KEGG: pap:PSPA7_2969 probable acetyltransferase; GCN5-like N-acetyltransferase 1118967..1119485 Serratia proteamaculans 568 5606226 YP_001477250.1 CDS aroL NC_009832.1 1119602 1120126 D type II enzyme similar to type I but differentially regulated and with a lower Km; catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase II 1119602..1120126 Serratia proteamaculans 568 5603038 YP_001477251.1 CDS Spro_1019 NC_009832.1 1120146 1120919 R PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_B1773 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(1120146..1120919) Serratia proteamaculans 568 5603039 YP_001477252.1 CDS Spro_1020 NC_009832.1 1121020 1121424 D KEGG: cvi:CV_3714 hypothetical protein; hypothetical protein 1121020..1121424 Serratia proteamaculans 568 5606400 YP_001477253.1 CDS Spro_1021 NC_009832.1 1121543 1121671 D KEGG: kpn:KPN_00333 hypothetical protein; hypothetical protein 1121543..1121671 Serratia proteamaculans 568 5606401 YP_001477254.1 CDS Spro_1022 NC_009832.1 1121975 1122748 D PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bja:bll3245 transcriptional regulatory protein; IclR family transcriptional regulator 1121975..1122748 Serratia proteamaculans 568 5606402 YP_001477255.1 CDS Spro_1023 NC_009832.1 1122935 1124509 D PFAM: Oligopeptide transporter OPT superfamily protein; KEGG: vei:Veis_1103 oligopeptide transporter OPT superfamily protein; oligopeptide transporter OPT superfamily protein 1122935..1124509 Serratia proteamaculans 568 5606436 YP_001477256.1 CDS Spro_1024 NC_009832.1 1124542 1125471 D PFAM: protein of unknown function DUF1177; KEGG: vei:Veis_1102 protein of unknown function DUF1177; hypothetical protein 1124542..1125471 Serratia proteamaculans 568 5606437 YP_001477257.1 CDS Spro_1025 NC_009832.1 1125476 1126153 D PFAM: AroM family protein; KEGG: ssn:SSON_0366 protein of aro operon, regulated by AroR; hypothetical protein 1125476..1126153 Serratia proteamaculans 568 5606438 YP_001477258.1 CDS Spro_1026 NC_009832.1 1126365 1126655 D PFAM: protein of unknown function DUF1255; KEGG: ypi:YpsIP31758_3142 hypothetical protein; hypothetical protein 1126365..1126655 Serratia proteamaculans 568 5606476 YP_001477259.1 CDS rdgC NC_009832.1 1127367 1128278 R Required for efficient pilin antigenic variation; recombination associated protein complement(1127367..1128278) Serratia proteamaculans 568 5606477 YP_001477260.1 CDS Spro_1028 NC_009832.1 1128367 1130979 R TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: ypi:YpsIP31758_4031 sensory box histidine kinase/response regulator; multi-sensor hybrid histidine kinase complement(1128367..1130979) Serratia proteamaculans 568 5606478 YP_001477261.1 CDS Spro_1029 NC_009832.1 1131121 1132641 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ent:Ent638_0289 ABC transporter related; ABC transporter-like protein 1131121..1132641 Serratia proteamaculans 568 5606499 YP_001477262.1 CDS Spro_1030 NC_009832.1 1132634 1133659 D PFAM: inner-membrane translocator; KEGG: kpn:KPN_04488 putative carbohydrate ABC transport system permease; monosaccharide-transporting ATPase 1132634..1133659 Serratia proteamaculans 568 5606500 YP_001477263.1 CDS Spro_1031 NC_009832.1 1133759 1134703 D PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: kpn:KPN_04487 D-ribose periplasmic binding protein; periplasmic binding protein/LacI transcriptional regulator 1133759..1134703 Serratia proteamaculans 568 5606501 YP_001477264.1 CDS Spro_1032 NC_009832.1 1134767 1135453 D PFAM: protein of unknown function DUF1498; KEGG: yps:YPTB3804 hypothetical protein; hypothetical protein 1134767..1135453 Serratia proteamaculans 568 5602728 YP_001477265.1 CDS Spro_1033 NC_009832.1 1135465 1136325 D KEGG: ypi:YpsIP31758_4026 putative fructose-bisphosphate aldolase; TIGRFAM: ketose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II; hypothetical protein 1135465..1136325 Serratia proteamaculans 568 5602729 YP_001477266.1 CDS Spro_1034 NC_009832.1 1136325 1137338 D PFAM: PfkB domain protein; KEGG: yps:YPTB3802 PfkB family carbohydrate kinase; ribokinase-like domain-containing protein 1136325..1137338 Serratia proteamaculans 568 5602730 YP_001477267.1 CDS Spro_1035 NC_009832.1 1137313 1138053 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ent:Ent638_0283 two component transcriptional regulator, winged helix family; two component transcriptional regulator complement(1137313..1138053) Serratia proteamaculans 568 5606549 YP_001477268.1 CDS Spro_1036 NC_009832.1 1138264 1139172 D PFAM: ROK family protein; KEGG: kpn:KPN_00337 possible NAGC-like transcriptional regulator; ROK family protein 1138264..1139172 Serratia proteamaculans 568 5606550 YP_001477269.1 CDS Spro_1037 NC_009832.1 1139278 1139511 D KEGG: ypi:YpsIP31758_3738 prevent-host-death family protein; prevent-host-death family protein 1139278..1139511 Serratia proteamaculans 568 5606583 YP_001477270.1 CDS Spro_1038 NC_009832.1 1139508 1139894 D PFAM: PilT protein domain protein; KEGG: nmc:NMC1584 hypothetical protein; PilT domain-containing protein 1139508..1139894 Serratia proteamaculans 568 5606584 YP_001477271.1 CDS Spro_1039 NC_009832.1 1139974 1143225 R TIGRFAM: exonuclease SbcC; PFAM: SMC domain protein; KEGG: ypp:YPDSF_2840 hypothetical protein; exonuclease SbcC complement(1139974..1143225) Serratia proteamaculans 568 5606585 YP_001477272.1 CDS Spro_1040 NC_009832.1 1143222 1144454 R with SbcC cleaves DNA hairpin structure, also has 5' single-strand endonuclease activity; exonuclease subunit SbcD complement(1143222..1144454) Serratia proteamaculans 568 5606599 YP_001477273.1 CDS Spro_1041 NC_009832.1 1144656 1145345 D TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ypi:YpsIP31758_3136 phosphate regulon transcriptional regulatory protein PhoB; two component transcriptional regulator 1144656..1145345 Serratia proteamaculans 568 5606600 YP_001477274.1 CDS phoR NC_009832.1 1145370 1146686 D membrane-associated histidine protein kinase that phosphorylates phoB in response to environmental signals as part of the two-component phosphate regulatory system phoR/phoB; phosphate regulon sensor protein 1145370..1146686 Serratia proteamaculans 568 5606601 YP_001477275.1 CDS Spro_1043 NC_009832.1 1146703 1147641 D TIGRFAM: phosphate binding protein; KEGG: eca:ECA1112 putative phosphate binding protein; phosphate binding protein 1146703..1147641 Serratia proteamaculans 568 5602570 YP_001477276.1 CDS Spro_1044 NC_009832.1 1147850 1148956 D catalyzes the formation of tetrahydropteroyl-L-glutamate and methionine from L-homocysteine and 5-methyltetrahydropteroyltri-L-glutamate; 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase 1147850..1148956 Serratia proteamaculans 568 5602571 YP_001477277.1 CDS Spro_1045 NC_009832.1 1149404 1150723 D PFAM: branched-chain amino acid transport system II carrier protein; KEGG: yen:YE3179 branched-chain amino acid transport system II carrier protein; branched-chain amino acid transport system II carrier protein 1149404..1150723 Serratia proteamaculans 568 5602572 YP_001477278.1 CDS proY NC_009832.1 1150795 1152201 D cryptic permease that may be involved in the transport of proline across the inner membrane; in Salmonella typhimurium, the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation; putative proline-specific permease 1150795..1152201 Serratia proteamaculans 568 5606085 YP_001477279.1 CDS Spro_1047 NC_009832.1 1152424 1152687 R hypothetical protein complement(1152424..1152687) Serratia proteamaculans 568 5606086 YP_001477280.1 CDS Spro_1048 NC_009832.1 1152819 1154084 R PFAM: MscS Mechanosensitive ion channel; KEGG: ypi:YpsIP31758_1534 transporter, small conductance mechanosensitive ion channel (MscS) family; mechanosensitive ion channel MscS complement(1152819..1154084) Serratia proteamaculans 568 5606087 YP_001477281.1 CDS Spro_1049 NC_009832.1 1154333 1156156 D PFAM: glycoside hydrolase family 13 domain protein Ig domain protein region domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: yen:YE3177 putative maltodextrin glucosidase; maltodextrin glucosidase 1154333..1156156 Serratia proteamaculans 568 5606692 YP_001477282.1 CDS Spro_1050 NC_009832.1 1156173 1156664 R PFAM: regulatory protein LuxR; KEGG: gme:Gmet_2158 two component transcriptional regulator, LuxR family; LuxR family transcriptional regulator complement(1156173..1156664) Serratia proteamaculans 568 5606693 YP_001477283.1 CDS Spro_1051 NC_009832.1 1156692 1157216 R PFAM: Fimbrial protein; KEGG: shm:Shewmr7_3393 fimbrial protein; fimbrial protein complement(1156692..1157216) Serratia proteamaculans 568 5606694 YP_001477284.1 CDS Spro_1052 NC_009832.1 1157231 1158268 R PFAM: Fimbrial protein; KEGG: ent:Ent638_1072 fimbrial protein; fimbrial protein complement(1157231..1158268) Serratia proteamaculans 568 5606703 YP_001477285.1 CDS Spro_1053 NC_009832.1 1158265 1160778 R PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: kpn:KPN_00277 putative fimbrial usher; fimbrial biogenesis outer membrane usher protein complement(1158265..1160778) Serratia proteamaculans 568 5606704 YP_001477286.1 CDS Spro_1054 NC_009832.1 1160811 1161515 R PFAM: pili assembly chaperone; KEGG: sec:SC0176 putative fimbrial chaparone; pili assembly chaperone complement(1160811..1161515) Serratia proteamaculans 568 5606734 YP_001477287.1 CDS Spro_1055 NC_009832.1 1161570 1162151 R PFAM: Fimbrial protein; KEGG: shm:Shewmr7_3393 fimbrial protein; fimbrial protein complement(1161570..1162151) Serratia proteamaculans 568 5606735 YP_001477288.1 CDS Spro_1056 NC_009832.1 1162537 1163130 R PFAM: integrase family protein; KEGG: ecv:APECO1_1681 hypothetical protein; integrase family protein complement(1162537..1163130) Serratia proteamaculans 568 5606736 YP_001477289.1 CDS Spro_1057 NC_009832.1 1163245 1165008 R KEGG: yen:YE3175 gamma-glutamyltranspeptidase precursor; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase complement(1163245..1165008) Serratia proteamaculans 568 5606748 YP_001477290.1 CDS Spro_1058 NC_009832.1 1165239 1165841 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: ypi:YpsIP31758_3126 antioxidant, AhpC/TSA family; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen complement(1165239..1165841) Serratia proteamaculans 568 5606749 YP_001477291.1 CDS Spro_1059 NC_009832.1 1166071 1166652 R PFAM: protein of unknown function DUF479; KEGG: yen:YE3173 hypothetical protein; (Acyl-carrier-protein) phosphodiesterase complement(1166071..1166652) Serratia proteamaculans 568 5606750 YP_001477292.1 CDS queA NC_009832.1 1166773 1167843 D Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1166773..1167843 Serratia proteamaculans 568 5606758 YP_001477293.1 CDS tgt NC_009832.1 1167916 1169040 D Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 1167916..1169040 Serratia proteamaculans 568 5606759 YP_001477294.1 CDS yajC NC_009832.1 1169074 1169406 D member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC 1169074..1169406 Serratia proteamaculans 568 5606760 YP_001477295.1 CDS secD NC_009832.1 1169432 1171279 D part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 1169432..1171279 Serratia proteamaculans 568 5606770 YP_001477296.1 CDS secF NC_009832.1 1171290 1172258 D forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 1171290..1172258 Serratia proteamaculans 568 5606771 YP_001477297.1 CDS Spro_1065 NC_009832.1 1172318 1172938 R PFAM: regulatory protein LuxR; response regulator receiver; KEGG: stm:STM1387 response regulator; two component LuxR family transcriptional regulator complement(1172318..1172938) Serratia proteamaculans 568 5606772 YP_001477298.1 CDS Spro_1066 NC_009832.1 1172913 1174670 R PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: yen:YE1614 tetrathionate reductase complex: sensory transduction histidine kinase; histidine kinase complement(1172913..1174670) Serratia proteamaculans 568 5606776 YP_001477299.1 CDS Spro_1067 NC_009832.1 1174824 1175558 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: yen:YE1615 tetrathionate reductase subunit B; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 1174824..1175558 Serratia proteamaculans 568 5606777 YP_001477300.1 CDS Spro_1068 NC_009832.1 1175555 1176613 D PFAM: Polysulphide reductase NrfD; KEGG: yen:YE1616 tetrathionate reductase subunit C; polysulfide reductase NrfD 1175555..1176613 Serratia proteamaculans 568 5606778 YP_001477301.1 CDS Spro_1069 NC_009832.1 1176606 1179689 D PFAM: molydopterin dinucleotide-binding region; KEGG: yen:YE1617 tetrathionate reductase subunit A; molydopterin dinucleotide-binding region 1176606..1179689 Serratia proteamaculans 568 5606825 YP_001477302.1 CDS Spro_1070 NC_009832.1 1179735 1180289 R KEGG: eca:ECA1124 putative lipoprotein; hypothetical protein complement(1179735..1180289) Serratia proteamaculans 568 5606826 YP_001477303.1 CDS nrdR NC_009832.1 1180477 1180926 D PFAM: ATP-cone domain protein; KEGG: ypi:YpsIP31758_3118 transcriptional regulator, NrdR family; transcriptional regulator NrdR 1180477..1180926 Serratia proteamaculans 568 5606849 YP_001477304.1 CDS ribD NC_009832.1 1180937 1182046 D riboflavin biosynthesis protein which catalyzes the deamination and reduction steps in the riboflavin biosynthesis pathway; catalyzes the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 5-amino-6-(5-phosphoribitylamino)uracil; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase 1180937..1182046 Serratia proteamaculans 568 5606850 YP_001477305.1 CDS ribH NC_009832.1 1182166 1182636 D RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 1182166..1182636 Serratia proteamaculans 568 5606851 YP_001477306.1 CDS nusB NC_009832.1 1182657 1183073 D Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 1182657..1183073 Serratia proteamaculans 568 5605253 YP_001477307.1 CDS Spro_1075 NC_009832.1 1183126 1184109 D catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP; thiamine monophosphate kinase 1183126..1184109 Serratia proteamaculans 568 5605254 YP_001477308.1 CDS Spro_1076 NC_009832.1 1184111 1184605 D hydrolyzes phosphatidylglycerophosphate to produce phosphatidylglycerol and phosphate; phosphatidylglycerophosphatase A 1184111..1184605 Serratia proteamaculans 568 5605255 YP_001477309.1 CDS Spro_1077 NC_009832.1 1184649 1185623 R PFAM: aldo/keto reductase; KEGG: ecp:ECP_0478 putative oxidoreductase; aldo/keto reductase complement(1184649..1185623) Serratia proteamaculans 568 5606887 YP_001477310.1 CDS Spro_1078 NC_009832.1 1185731 1187596 R catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase complement(1185731..1187596) Serratia proteamaculans 568 5606888 YP_001477311.1 CDS Spro_1079 NC_009832.1 1187631 1188551 R PFAM: Polyprenyl synthetase; KEGG: yen:YE3154 geranyltranstransferase; geranyltranstransferase complement(1187631..1188551) Serratia proteamaculans 568 5606889 YP_001477312.1 CDS Spro_1080 NC_009832.1 1188557 1188820 R catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit complement(1188557..1188820) Serratia proteamaculans 568 5606830 YP_001477313.1 CDS Spro_1081 NC_009832.1 1189053 1190501 D Required for the synthesis of the thiazole moiety; thiamine biosynthesis protein ThiI 1189053..1190501 Serratia proteamaculans 568 5606831 YP_001477314.1 CDS Spro_1082 NC_009832.1 1190536 1191126 R TIGRFAM: DJ-1 family protein; PFAM: ThiJ/PfpI domain protein; KEGG: eca:ECA1135 4-methyl-5b-hydroxyethyl)-thiazole monophosphate biosynthesis protein; DJ-1 family protein complement(1190536..1191126) Serratia proteamaculans 568 5606832 YP_001477315.1 CDS Spro_1083 NC_009832.1 1191089 1192000 R ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis; 2-dehydropantoate 2-reductase complement(1191089..1192000) Serratia proteamaculans 568 5606995 YP_001477316.1 CDS Spro_1084 NC_009832.1 1192183 1192674 D putative nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; putative nucleotide-binding protein 1192183..1192674 Serratia proteamaculans 568 5606996 YP_001477317.1 CDS Spro_1085 NC_009832.1 1192878 1194242 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: yen:YE3146 putative transporter; major facilitator transporter complement(1192878..1194242) Serratia proteamaculans 568 5606997 YP_001477318.1 CDS Spro_1086 NC_009832.1 1194443 1195333 R converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase complement(1194443..1195333) Serratia proteamaculans 568 5607039 YP_001477319.1 CDS Spro_1087 NC_009832.1 1195351 1195689 R TIGRFAM: Cytochrome o ubiquinol oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV; KEGG: ypi:YpsIP31758_3101 cytochrome o ubiquinol oxidase, subunit IV; cytochrome o ubiquinol oxidase subunit IV complement(1195351..1195689) Serratia proteamaculans 568 5607040 YP_001477320.1 CDS Spro_1088 NC_009832.1 1195686 1196303 R TIGRFAM: Cytochrome o ubiquinol oxidase subunit III; PFAM: cytochrome c oxidase subunit III; KEGG: yen:YE3143 cytochrome o ubiquinol oxidase subunit III; cytochrome o ubiquinol oxidase subunit III complement(1195686..1196303) Serratia proteamaculans 568 5607059 YP_001477321.1 CDS Spro_1089 NC_009832.1 1196293 1198284 R KEGG: yen:YE3142 cytochrome o ubiquinol oxidase subunit I; TIGRFAM: Cytochrome o ubiquinol oxidase subunit I; PFAM: cytochrome c oxidase subunit I; cytochrome o ubiquinol oxidase subunit I complement(1196293..1198284) Serratia proteamaculans 568 5607060 YP_001477322.1 CDS Spro_1090 NC_009832.1 1198288 1199238 R TIGRFAM: ubiquinol oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; COX aromatic rich domain protein; KEGG: yen:YE3141 cytochrome o ubiquinol oxidase subunit II; cytochrome o ubiquinol oxidase subunit II complement(1198288..1199238) Serratia proteamaculans 568 5607061 YP_001477323.1 CDS ampG NC_009832.1 1199679 1201157 R in Escherichia coli this protein is a permease involved in peptidoglycan recycling; member of major facilitator superfamily; MFS; inner membrane protein; muropeptide transporter complement(1199679..1201157) Serratia proteamaculans 568 5607138 YP_001477324.1 CDS Spro_1092 NC_009832.1 1201211 1201789 R PFAM: Uncharacterized lipoprotein; KEGG: ypi:YpsIP31758_3095 putative lipoprotein; hypothetical protein complement(1201211..1201789) Serratia proteamaculans 568 5607139 YP_001477325.1 CDS Spro_1093 NC_009832.1 1202151 1202465 D positive transcriptional regulator of morphogenetic pathway; controlling several genes involved in oxidative stress, acid stress, heat shock, osmotic shock, and carbon-starvation stress; transcriptional regulator BolA 1202151..1202465 Serratia proteamaculans 568 5607140 YP_001477326.1 CDS tig NC_009832.1 1202832 1204136 D Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 1202832..1204136 Serratia proteamaculans 568 5607144 YP_001477327.1 CDS Spro_1095 NC_009832.1 1204575 1205198 D KEGG: yen:YE3134 ATP-dependent Clp protease proteolytic subunit ClpP; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; PFAM: peptidase S14 ClpP; ATP-dependent Clp protease, proteolytic subunit ClpP 1204575..1205198 Serratia proteamaculans 568 5607145 YP_001477328.1 CDS clpX NC_009832.1 1205361 1206632 D binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 1205361..1206632 Serratia proteamaculans 568 5607146 YP_001477329.1 CDS Spro_1097 NC_009832.1 1206828 1209182 D KEGG: yen:YE3132 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; DNA-binding ATP-dependent protease La 1206828..1209182 Serratia proteamaculans 568 5604442 YP_001477330.1 CDS Spro_1098 NC_009832.1 1209366 1209671 D PFAM: histone family protein DNA-binding protein; KEGG: sdy:SDY_0292 DNA-binding protein HU-beta; histone family protein DNA-binding protein 1209366..1209671 Serratia proteamaculans 568 5604443 YP_001477331.1 CDS Spro_1099 NC_009832.1 1209854 1211737 D PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: yen:YE3130 peptidyl-prolyl cis-trans isomerase D; peptidyl-prolyl cis-trans isomerase D 1209854..1211737 Serratia proteamaculans 568 5604444 YP_001477332.1 CDS Spro_1100 NC_009832.1 1211877 1212266 D TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; KEGG: eca:ECA1153 hypothetical protein; helix-hairpin-helix repeat-containing competence protein ComEA 1211877..1212266 Serratia proteamaculans 568 5604735 YP_001477333.1 CDS Spro_1101 NC_009832.1 1212422 1212835 D PFAM: thioesterase superfamily protein; KEGG: ent:Ent638_0910 thioesterase superfamily protein; thioesterase superfamily protein 1212422..1212835 Serratia proteamaculans 568 5604736 YP_001477334.1 CDS Spro_1102 NC_009832.1 1212871 1213569 R YbaX; catalyzes the transformation of GTP to 7-cyano-7-deazaguanine (preQ0), as one of the early reactions of quenosine biosynthesis; quenosine is a modified nucleoside that occurs at the wobble position of GUN anticodons in tRNAs for Asn, Asp, Tyr, and His; queuosine biosynthesis protein QueC complement(1212871..1213569) Serratia proteamaculans 568 5604737 YP_001477335.1 CDS Spro_1103 NC_009832.1 1213688 1215415 R PFAM: extracellular solute-binding protein family 5; KEGG: yen:YE3126 hypothetical protein; extracellular solute-binding protein complement(1213688..1215415) Serratia proteamaculans 568 5605473 YP_001477336.1 CDS Spro_1104 NC_009832.1 1215520 1216344 D TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase type 3; KEGG: yen:YE3125 putative haloacid dehalogenase-like hydrolase; Cof-like hydrolase 1215520..1216344 Serratia proteamaculans 568 5605474 YP_001477337.1 CDS Spro_1105 NC_009832.1 1216406 1217449 R PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: yen:YE3124 putative pyridoxal-phosphate dependent protein; pyridoxal-5'-phosphate-dependent protein subunit beta complement(1216406..1217449) Serratia proteamaculans 568 5607228 YP_001477338.1 CDS Spro_1106 NC_009832.1 1217569 1218030 D PFAM: regulatory protein AsnC/Lrp family; KEGG: yen:YE3123 probable AsnC-family regulatory protein; AsnC family transcriptional regulator 1217569..1218030 Serratia proteamaculans 568 5607229 YP_001477339.1 CDS Spro_1107 NC_009832.1 1218122 1219897 D PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: yen:YE3122 probable ABC transporter (ATP-binding protein); putative multidrug transporter membrane\ATP-binding components 1218122..1219897 Serratia proteamaculans 568 5607230 YP_001477340.1 CDS Spro_1108 NC_009832.1 1219890 1221668 D PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: yen:YE3121 probable ATP transporter (ATP-binding protein); putative multidrug transporter membrane\ATP-binding components 1219890..1221668 Serratia proteamaculans 568 5607252 YP_001477341.1 CDS Spro_1109 NC_009832.1 1221963 1222301 D indirectly regulates nitrogen metabolism; at high nitrogen levels P-II 2 prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA); at low nitrogen levels P-II 2 is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA; functionally it is equivalent to protein P-II (GlnB), but itsexpression is driven by the presence of uridylyltransferase, nitrogen regulator I, and the absence of ammonia.; nitrogen regulatory protein P-II 2 1221963..1222301 Serratia proteamaculans 568 5607253 YP_001477342.1 CDS Spro_1110 NC_009832.1 1222338 1223624 D TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: yen:YE3119 probable ammonium transporter; ammonium transporter 1222338..1223624 Serratia proteamaculans 568 5607254 YP_001477343.1 CDS Spro_1111 NC_009832.1 1223721 1224584 R KEGG: yps:YPTB0975 acyl-CoA thioesterase II; TIGRFAM: acyl-CoA thioesterase II; PFAM: acyl-CoA thioesterase; acyl-CoA thioesterase II complement(1223721..1224584) Serratia proteamaculans 568 5607301 YP_001477344.1 CDS Spro_1112 NC_009832.1 1224815 1225306 D KEGG: yen:YE3117 putative lipoprotein; putative lipoprotein 1224815..1225306 Serratia proteamaculans 568 5607302 YP_001477345.1 CDS Spro_1113 NC_009832.1 1225372 1225686 R TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: yen:YE3116 putative 6-O-methylguanine DNA methyltransferase family protein; methylated-DNA--protein-cysteine methyltransferase complement(1225372..1225686) Serratia proteamaculans 568 5607303 YP_001477346.1 CDS Spro_1114 NC_009832.1 1226170 1228146 R PFAM: beta-lactamase domain protein; KEGG: stt:t1012 putative hydrolase; beta-lactamase domain-containing protein complement(1226170..1228146) Serratia proteamaculans 568 5605919 YP_001477347.1 CDS Spro_1115 NC_009832.1 1228571 1229914 R PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: kpn:KPN_02555 putative xanthine/uracil/vitamin C permease; xanthine/uracil/vitamin C permease complement(1228571..1229914) Serratia proteamaculans 568 5606323 YP_001477348.1 CDS Spro_1116 NC_009832.1 1229997 1231784 R PFAM: amidohydrolase; KEGG: kpn:KPN_02554 putative amidohydrolase; adenine deaminase complement(1229997..1231784) Serratia proteamaculans 568 5606324 YP_001477349.1 CDS Spro_1117 NC_009832.1 1231922 1232854 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: kpn:KPN_02553 putative transcriptional regulator (LysR family); LysR family transcriptional regulator 1231922..1232854 Serratia proteamaculans 568 5605044 YP_001477350.1 CDS Spro_1118 NC_009832.1 1232932 1233135 R with Hns involved in transcriptional regulation of hemolysin; non-specific DNA-binding protein which affects the production of multiple proteins; hemolysin expression-modulating protein complement(1232932..1233135) Serratia proteamaculans 568 5605045 YP_001477351.1 CDS Spro_1119 NC_009832.1 1233191 1233559 R KEGG: yen:YE3114 hypothetical protein; hypothetical protein complement(1233191..1233559) Serratia proteamaculans 568 5605046 YP_001477352.1 CDS Spro_1120 NC_009832.1 1233722 1234075 R KEGG: yps:YPTB0980 hypothetical protein; hypothetical protein complement(1233722..1234075) Serratia proteamaculans 568 5605795 YP_001477353.1 CDS Spro_1121 NC_009832.1 1234525 1235238 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: yen:YE3111 ABC transport system ATP-binding protein; ABC transporter-like protein 1234525..1235238 Serratia proteamaculans 568 5605796 YP_001477354.1 CDS Spro_1122 NC_009832.1 1235235 1236092 D PFAM: ABC-3 protein; KEGG: yen:YE3110 putative ABC-transporter membrane protein; ABC-3 protein 1235235..1236092 Serratia proteamaculans 568 5605869 YP_001477355.1 CDS Spro_1123 NC_009832.1 1236118 1236996 D PFAM: periplasmic solute binding protein; KEGG: yen:YE3109 periplasmic solute binding protein; periplasmic solute binding protein 1236118..1236996 Serratia proteamaculans 568 5605870 YP_001477356.1 CDS Spro_1124 NC_009832.1 1237110 1237250 R PFAM: ribosomal protein L36; KEGG: stm:STM0470 putative 50S ribosomal protein L36 (second copy); 50S ribosomal protein L36 complement(1237110..1237250) Serratia proteamaculans 568 5605871 YP_001477357.1 CDS rpmE2 NC_009832.1 1237263 1237520 R RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 type B complement(1237263..1237520) Serratia proteamaculans 568 5602470 YP_001477358.1 CDS Spro_1126 NC_009832.1 1237701 1240847 R TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: yen:YE3101 multidrug efflux protein; hydrophobe/amphiphile efflux-1 (HAE1) family protein complement(1237701..1240847) Serratia proteamaculans 568 5602471 YP_001477359.1 CDS Spro_1127 NC_009832.1 1240865 1242052 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: yen:YE3100 multidrug efflux protein; RND family efflux transporter MFP subunit complement(1240865..1242052) Serratia proteamaculans 568 5602472 YP_001477360.1 CDS Spro_1128 NC_009832.1 1242195 1242878 D regulates the acrAB operon which is involved in susceptibility to dephalothin and cephaloridine; DNA-binding transcriptional repressor AcrR 1242195..1242878 Serratia proteamaculans 568 5607369 YP_001477361.1 CDS Spro_1129 NC_009832.1 1242889 1243242 D PFAM: DsrE family protein; KEGG: ypi:YpsIP31758_3065 DsrE family protein; DsrE family protein 1242889..1243242 Serratia proteamaculans 568 5607370 YP_001477362.1 CDS Spro_1130 NC_009832.1 1243346 1246738 D small mechanosensitive ion channel (MscS) that opens in response to stretch forces in the membrane lipid bilayer; maintains cell turgor through accumulation and release of potassium; large protein class of MscS; potassium efflux protein KefA 1243346..1246738 Serratia proteamaculans 568 5607371 YP_001477363.1 CDS Spro_1131 NC_009832.1 1246782 1246961 R KEGG: yen:YE3096 hypothetical protein; hypothetical protein complement(1246782..1246961) Serratia proteamaculans 568 5607380 YP_001477364.1 CDS Spro_1132 NC_009832.1 1247068 1247604 R PFAM: Primosomal replication priB and priC; KEGG: ypi:YpsIP31758_3062 primosomal replication protein N''; primosomal replication priB and priC complement(1247068..1247604) Serratia proteamaculans 568 5607381 YP_001477365.1 CDS Spro_1133 NC_009832.1 1247755 1248135 D PFAM: protein of unknown function DUF454; KEGG: yps:YPTB0990 hypothetical protein; hypothetical protein 1247755..1248135 Serratia proteamaculans 568 5607382 YP_001477366.1 CDS Spro_1134 NC_009832.1 1248204 1248800 D catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 1248204..1248800 Serratia proteamaculans 568 5607386 YP_001477367.1 CDS Spro_1135 NC_009832.1 1248884 1250836 D catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau 1248884..1250836 Serratia proteamaculans 568 5607387 YP_001477368.1 CDS Spro_1136 NC_009832.1 1250878 1251207 D PFAM: conserved hypothetical protein; KEGG: ypi:YpsIP31758_3058 conserved hypothetical protein TIGR00103; hypothetical protein 1250878..1251207 Serratia proteamaculans 568 5607388 YP_001477369.1 CDS recR NC_009832.1 1251207 1251812 D involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 1251207..1251812 Serratia proteamaculans 568 5607413 YP_001477370.1 CDS Spro_1138 NC_009832.1 1251942 1253813 D molecular chaperone; heat shock protein 90 1251942..1253813 Serratia proteamaculans 568 5607414 YP_001477371.1 CDS adk NC_009832.1 1254018 1254662 D essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 1254018..1254662 Serratia proteamaculans 568 5606755 YP_001477372.1 CDS Spro_1140 NC_009832.1 1254831 1255964 D PFAM: sugar diacid recognition domain protein; KEGG: sec:SC2489 putative regulatory protein; transcriptional regulator CdaR 1254831..1255964 Serratia proteamaculans 568 5606756 YP_001477373.1 CDS Spro_1141 NC_009832.1 1256083 1257348 D PFAM: Gluconate transporter; Citrate transporter; KEGG: sec:SC2488 putative permease; gluconate transporter 1256083..1257348 Serratia proteamaculans 568 5606757 YP_001477374.1 CDS Spro_1142 NC_009832.1 1257358 1258506 D PFAM: glycerate kinase; KEGG: ypi:YpsIP31758_4052 glycerate kinase; glycerate kinase 1257358..1258506 Serratia proteamaculans 568 5605800 YP_001477375.1 CDS hemH NC_009832.1 1258641 1259603 D protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 1258641..1259603 Serratia proteamaculans 568 5605801 YP_001477376.1 CDS Spro_1144 NC_009832.1 1259695 1260999 D PFAM: PfkB domain protein; KEGG: yen:YE3069 inosine-guanosine kinase; inosine kinase 1259695..1260999 Serratia proteamaculans 568 5605802 YP_001477377.1 CDS Spro_1145 NC_009832.1 1261048 1262739 R YbaL; member of the CPA-2 family of antiporters; uncharacterized protein; putative cation:proton antiport protein complement(1261048..1262739) Serratia proteamaculans 568 5607433 YP_001477378.1 CDS Spro_1146 NC_009832.1 1262985 1264205 R PFAM: major facilitator superfamily MFS_1; KEGG: ypn:YPN_0996 membrane efflux protein; major facilitator transporter complement(1262985..1264205) Serratia proteamaculans 568 5607434 YP_001477379.1 CDS ushA NC_009832.1 1264387 1266042 D catalyzes the degradation of periplasmic UDP-glucose to uridine, glucose-1-phosphate and inorganic phosphate; specific for uridine nucleotides; bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic 1264387..1266042 Serratia proteamaculans 568 5607435 YP_001477380.1 CDS Spro_1148 NC_009832.1 1266081 1266560 R TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: yen:YE3063 hypothetical protein; hypothetical protein complement(1266081..1266560) Serratia proteamaculans 568 5604421 YP_001477381.1 CDS Spro_1149 NC_009832.1 1266786 1267589 R PFAM: GumN family protein; KEGG: eca:ECA1192 hypothetical protein; GumN family protein complement(1266786..1267589) Serratia proteamaculans 568 5604422 YP_001477382.1 CDS Spro_1150 NC_009832.1 1267769 1267969 R PFAM: Heavy metal transport/detoxification protein; KEGG: yen:YE3061 putative cation-transporting ATPase; heavy metal transport/detoxification protein complement(1267769..1267969) Serratia proteamaculans 568 5604423 YP_001477383.1 CDS Spro_1151 NC_009832.1 1268075 1268476 D TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: yen:YE3060 putative regulatory protein; MerR family transcriptional regulator 1268075..1268476 Serratia proteamaculans 568 5602683 YP_001477384.1 CDS Spro_1152 NC_009832.1 1268473 1268934 R PFAM: protein of unknown function DUF107; KEGG: yen:YE3059 hypothetical protein; hypothetical protein complement(1268473..1268934) Serratia proteamaculans 568 5602684 YP_001477385.1 CDS Spro_1153 NC_009832.1 1268937 1269842 R PFAM: band 7 protein; KEGG: yen:YE3058 hypothetical protein; hypothetical protein complement(1268937..1269842) Serratia proteamaculans 568 5602685 YP_001477386.1 CDS Spro_1154 NC_009832.1 1270207 1271358 D catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge; cyclopropane fatty acyl phospholipid synthase 1270207..1271358 Serratia proteamaculans 568 5603462 YP_001477387.1 CDS Spro_1155 NC_009832.1 1271394 1272278 R PFAM: Thioredoxin domain; KEGG: yen:YE3057 putative thioredoxin; thioredoxin domain-containing protein complement(1271394..1272278) Serratia proteamaculans 568 5603463 YP_001477388.1 CDS Spro_1156 NC_009832.1 1272329 1273105 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: yen:YE3056 probable short-chain dehydrogenase; short chain dehydrogenase complement(1272329..1273105) Serratia proteamaculans 568 5603688 YP_001477389.1 CDS Spro_1157 NC_009832.1 1273131 1273721 R PFAM: lipolytic protein G-D-S-L family; KEGG: ypi:YpsIP31758_3021 GDSL-like lipase/acylhydrolase family protein; multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 complement(1273131..1273721) Serratia proteamaculans 568 5603689 YP_001477390.1 CDS Spro_1158 NC_009832.1 1273740 1274426 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ypp:YPDSF_2717 ABC transporter ATP-binding protein; putative ABC transporter ATP-binding protein YbbA 1273740..1274426 Serratia proteamaculans 568 5603690 YP_001477391.1 CDS Spro_1159 NC_009832.1 1274423 1276855 D PFAM: protein of unknown function DUF214; KEGG: yen:YE3053 putative permease; hypothetical protein 1274423..1276855 Serratia proteamaculans 568 5604640 YP_001477392.1 CDS Spro_1160 NC_009832.1 1277252 1278658 D KEGG: ent:Ent638_3347 sugar transporter; TIGRFAM: sugar transporter; PFAM: General substrate transporter; major facilitator superfamily MFS_1; sugar transporter 1277252..1278658 Serratia proteamaculans 568 5604641 YP_001477393.1 CDS Spro_1161 NC_009832.1 1278730 1279746 D TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KR domain protein; KEGG: plu:plu4831 UDP-glucose 4-epimerase (galactowaldenase) (UDP-galactose 4-epimerase); UDP-glucose 4-epimerase 1278730..1279746 Serratia proteamaculans 568 5604642 YP_001477394.1 CDS Spro_1162 NC_009832.1 1279874 1280941 R With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit complement(1279874..1280941) Serratia proteamaculans 568 5602555 YP_001477395.1 CDS Spro_1163 NC_009832.1 1280938 1281462 R KEGG: ypi:YpsIP31758_3017 phosphoribosylaminoimidazole carboxylase, catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase, catalytic subunit complement(1280938..1281462) Serratia proteamaculans 568 5602556 YP_001477396.1 CDS Spro_1164 NC_009832.1 1281628 1282350 R catalyzes the formation of 2,3=diacylglucosamine 1-phosphate from UDP-2,3=diacylglucosamine; UDP-2,3-diacylglucosamine hydrolase complement(1281628..1282350) Serratia proteamaculans 568 5602557 YP_001477397.1 CDS Spro_1165 NC_009832.1 1282361 1282855 R PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: ent:Ent638_0979 peptidylprolyl isomerase; peptidyl-prolyl cis-trans isomerase B complement(1282361..1282855) Serratia proteamaculans 568 5602722 YP_001477398.1 CDS cysS NC_009832.1 1283158 1284543 D catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 1283158..1284543 Serratia proteamaculans 568 5602723 YP_001477399.1 CDS Spro_1167 NC_009832.1 1284613 1284825 R KEGG: yen:YE3046 hypothetical protein; hypothetical protein complement(1284613..1284825) Serratia proteamaculans 568 5602724 YP_001477400.1 CDS Spro_1168 NC_009832.1 1284836 1285702 R catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase complement(1284836..1285702) Serratia proteamaculans 568 5602725 YP_001477401.1 CDS Spro_1169 NC_009832.1 1286139 1286435 D hypothetical protein 1286139..1286435 Serratia proteamaculans 568 5602726 YP_001477402.1 CDS Spro_1170 NC_009832.1 1287524 1288618 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ret:RHE_PD00126 probable aryl-alcohol dehydrogenase protein; alcohol dehydrogenase 1287524..1288618 Serratia proteamaculans 568 5605592 YP_001477403.1 CDS Spro_1171 NC_009832.1 1288652 1289152 D KEGG: nfa:nfa43510 hypothetical protein; hypothetical protein 1288652..1289152 Serratia proteamaculans 568 5602751 YP_001477404.1 CDS Spro_1172 NC_009832.1 1289330 1290409 D PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: pfo:Pfl_2479 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase/NADH oxidase 1289330..1290409 Serratia proteamaculans 568 5602752 YP_001477405.1 CDS Spro_1173 NC_009832.1 1290935 1291918 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bur:Bcep18194_B1199 zinc-containing alcohol dehydrogenase superfamily; alcohol dehydrogenase 1290935..1291918 Serratia proteamaculans 568 5602773 YP_001477406.1 CDS Spro_1174 NC_009832.1 1291987 1292706 D PFAM: DSBA oxidoreductase; KEGG: bur:Bcep18194_B1200 DsbA oxidoreductase; DSBA oxidoreductase 1291987..1292706 Serratia proteamaculans 568 5602774 YP_001477407.1 CDS Spro_1175 NC_009832.1 1292709 1293200 D KEGG: bur:Bcep18194_B1201 hypothetical protein; hypothetical protein 1292709..1293200 Serratia proteamaculans 568 5602775 YP_001477408.1 CDS Spro_1176 NC_009832.1 1293321 1294358 R PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_B1198 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(1293321..1294358) Serratia proteamaculans 568 5602818 YP_001477409.1 CDS Spro_1177 NC_009832.1 1294641 1294937 D KEGG: ent:Ent638_3518 beta-lactamase domain protein; beta-lactamase domain-containing protein 1294641..1294937 Serratia proteamaculans 568 5602819 YP_001477410.1 CDS Spro_1178 NC_009832.1 1295472 1296533 R PFAM: aldo/keto reductase; KEGG: msm:MSMEG_1304 rhizopine catabolism protein; aldo/keto reductase complement(1295472..1296533) Serratia proteamaculans 568 5602820 YP_001477411.1 CDS Spro_1179 NC_009832.1 1296631 1297542 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mlo:mll1582 probable transcriptional regulator; LysR family transcriptional regulator 1296631..1297542 Serratia proteamaculans 568 5602827 YP_001477412.1 CDS Spro_1180 NC_009832.1 1297673 1298224 D PFAM: flavodoxin/nitric oxide synthase; KEGG: eca:ECA3603 putative flavodoxin; flavodoxin/nitric oxide synthase 1297673..1298224 Serratia proteamaculans 568 5602828 YP_001477413.1 CDS Spro_1181 NC_009832.1 1298717 1300165 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; MASE1 domain protein; KEGG: pen:PSEEN2260 diguanylate cyclase (GGDEF) domain; diguanylate cyclase 1298717..1300165 Serratia proteamaculans 568 5602829 YP_001477414.1 CDS Spro_1182 NC_009832.1 1300601 1301092 R PFAM: Cold-shock protein DNA-binding; KEGG: yps:YPTB1087 hypothetical protein; cold-shock DNA-binding domain-containing protein complement(1300601..1301092) Serratia proteamaculans 568 5602833 YP_001477415.1 CDS Spro_1183 NC_009832.1 1301247 1301756 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cvi:CV_3594 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 1301247..1301756 Serratia proteamaculans 568 5602834 YP_001477416.1 CDS Spro_1184 NC_009832.1 1301787 1302614 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA2153 ABC transporter, ATP-binding protein; ABC transporter-like protein complement(1301787..1302614) Serratia proteamaculans 568 5602835 YP_001477417.1 CDS Spro_1185 NC_009832.1 1302624 1303511 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA2154 putative ABC transporter, permease; polar amino acid ABC transporter inner membrane subunit complement(1302624..1303511) Serratia proteamaculans 568 5602842 YP_001477418.1 CDS Spro_1186 NC_009832.1 1303560 1304087 R PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA2155 putative acetyltransferase; GCN5-like N-acetyltransferase complement(1303560..1304087) Serratia proteamaculans 568 5602843 YP_001477419.1 CDS Spro_1187 NC_009832.1 1304180 1305505 R KEGG: ent:Ent638_2090 hypothetical protein; hypothetical protein complement(1304180..1305505) Serratia proteamaculans 568 5602844 YP_001477420.1 CDS Spro_1188 NC_009832.1 1305690 1306853 R KEGG: eca:ECA2160 putative peptidase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase complement(1305690..1306853) Serratia proteamaculans 568 5602876 YP_001477421.1 CDS cspE NC_009832.1 1307200 1307409 D member of the CspA family; constitutively expressed RNA/ssDNA-binding protein; functions in helping cells adapt to low temperature; aids nucleic acid melting; participates in gene regulation; can act as a transcription antiterminator; cold shock protein CspE 1307200..1307409 Serratia proteamaculans 568 5602877 YP_001477422.1 CDS Spro_1190 NC_009832.1 1307476 1308666 R TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bld:BLi04103 putative bicyclomycin resistance protein; Bcr/CflA subfamily drug resistance transporter complement(1307476..1308666) Serratia proteamaculans 568 5602878 YP_001477423.1 CDS Spro_1191 NC_009832.1 1308672 1309268 R PFAM: regulatory protein TetR; KEGG: ecs:ECs1862 putative transcription regulatory protein; TetR family transcriptional regulator complement(1308672..1309268) Serratia proteamaculans 568 5602879 YP_001477424.1 CDS Spro_1192 NC_009832.1 1309570 1309953 R TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein; KEGG: ypi:YpsIP31758_2957 CrcB protein; CrcB protein complement(1309570..1309953) Serratia proteamaculans 568 5602880 YP_001477425.1 CDS Spro_1193 NC_009832.1 1310186 1311247 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; MASE2 domain protein; KEGG: yen:YE3010 putative diguanylate cyclase/phosphodiesterase domain 1 protein; diguanylate cyclase complement(1310186..1311247) Serratia proteamaculans 568 5602881 YP_001477426.1 CDS tatE NC_009832.1 1311467 1311676 D TatE; similar to TatA and found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin arginine translocase protein A 1311467..1311676 Serratia proteamaculans 568 5602882 YP_001477427.1 CDS Spro_1195 NC_009832.1 1311772 1312737 R catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase complement(1311772..1312737) Serratia proteamaculans 568 5602883 YP_001477428.1 CDS lipB NC_009832.1 1312730 1313398 R lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein; lipoate-protein ligase B complement(1312730..1313398) Serratia proteamaculans 568 5602900 YP_001477429.1 CDS Spro_1197 NC_009832.1 1313533 1313796 R PFAM: protein of unknown function DUF493; KEGG: sgl:SG0794 hypothetical protein; hypothetical protein complement(1313533..1313796) Serratia proteamaculans 568 5602901 YP_001477430.1 CDS Spro_1198 NC_009832.1 1313908 1315194 R penicillin-binding protein 5; removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors; D-alanyl-D-alanine carboxypeptidase fraction A complement(1313908..1315194) Serratia proteamaculans 568 5602902 YP_001477431.1 CDS Spro_1199 NC_009832.1 1315298 1316383 R TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; Sporulation domain protein; KEGG: yen:YE3004 rare lipoprotein A precursor; rare lipoprotein A complement(1315298..1316383) Serratia proteamaculans 568 5602906 YP_001477432.1 CDS Spro_1200 NC_009832.1 1316394 1317506 R TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: yen:YE3003 rod shape-determining protein; cell wall shape-determining protein complement(1316394..1317506) Serratia proteamaculans 568 5602907 YP_001477433.1 CDS Spro_1201 NC_009832.1 1317515 1319410 R PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: yen:YE3002 penicillin-binding protein 2; penicillin-binding protein 2 complement(1317515..1319410) Serratia proteamaculans 568 5602908 YP_001477434.1 CDS Spro_1202 NC_009832.1 1319449 1319919 R PFAM: protein of unknown function DUF163; KEGG: ypi:YpsIP31758_2948 conserved hypothetical protein TIGR00246; hypothetical protein complement(1319449..1319919) Serratia proteamaculans 568 5602917 YP_001477435.1 CDS Spro_1203 NC_009832.1 1319923 1320240 R TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: stm:STM0642 hypothetical protein; hypothetical protein complement(1319923..1320240) Serratia proteamaculans 568 5602918 YP_001477436.1 CDS nadD NC_009832.1 1320429 1321091 R transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria; nicotinic acid mononucleotide adenylyltransferase complement(1320429..1321091) Serratia proteamaculans 568 5602919 YP_001477437.1 CDS holA NC_009832.1 1321081 1322115 R required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta complement(1321081..1322115) Serratia proteamaculans 568 5602923 YP_001477438.1 CDS Spro_1206 NC_009832.1 1322112 1322672 R rare lipoprotein B; involved in the assembly of LPS in the outer membrane; LPS-assembly lipoprotein RlpB complement(1322112..1322672) Serratia proteamaculans 568 5602924 YP_001477439.1 CDS leuS NC_009832.1 1322687 1325269 R leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase complement(1322687..1325269) Serratia proteamaculans 568 5602925 YP_001477440.1 CDS Spro_1208 NC_009832.1 1325536 1326018 D PFAM: protein of unknown function DUF1451; KEGG: yen:YE2995 hypothetical protein; hypothetical protein 1325536..1326018 Serratia proteamaculans 568 5603011 YP_001477441.1 CDS Spro_1209 NC_009832.1 1326077 1326775 R PFAM: NAD(P)H dehydrogenase (quinone); KEGG: sec:SC1637 acyl carrier protein phosphodiesterase; NAD(P)H dehydrogenase (quinone) complement(1326077..1326775) Serratia proteamaculans 568 5603012 YP_001477442.1 CDS rihA NC_009832.1 1326924 1327856 R Hydrolyzes with equal efficiency cytidine or uridine to ribose and cytosine or uracil, respectively; pyrimidine-specific; ribonucleoside hydrolase 1 complement(1326924..1327856) Serratia proteamaculans 568 5603013 YP_001477443.1 CDS Spro_1211 NC_009832.1 1328095 1328820 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: yen:YE2994 putative glutamate/aspartate transport ATP-binding protein; ABC transporter-like protein complement(1328095..1328820) Serratia proteamaculans 568 5603049 YP_001477444.1 CDS Spro_1212 NC_009832.1 1328820 1329494 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA1312 glutamate/aspartate transport system permease protein; polar amino acid ABC transporter inner membrane subunit complement(1328820..1329494) Serratia proteamaculans 568 5603050 YP_001477445.1 CDS Spro_1213 NC_009832.1 1329494 1330234 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yen:YE2992 putative glutamate/aspartate transport system permease; polar amino acid ABC transporter inner membrane subunit complement(1329494..1330234) Serratia proteamaculans 568 5603066 YP_001477446.1 CDS Spro_1214 NC_009832.1 1330432 1331328 R PFAM: extracellular solute-binding protein family 3; KEGG: yen:YE2991 putative amino acid-binding protein precursor; glutamate and aspartate transporter subunit complement(1330432..1331328) Serratia proteamaculans 568 5603067 YP_001477447.1 CDS lnt NC_009832.1 1331711 1333240 R Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase complement(1331711..1333240) Serratia proteamaculans 568 5603068 YP_001477448.1 CDS Spro_1216 NC_009832.1 1333248 1334126 R PFAM: CBS domain containing protein; transporter-associated region; KEGG: yen:YE2988 hypothetical protein; transporter-associated protein complement(1333248..1334126) Serratia proteamaculans 568 5603388 YP_001477449.1 CDS Spro_1217 NC_009832.1 1334211 1334684 R PFAM: protein of unknown function UPF0054; KEGG: sec:SC0696 putative metal-dependent hydrolase; hypothetical protein complement(1334211..1334684) Serratia proteamaculans 568 5603389 YP_001477450.1 CDS Spro_1218 NC_009832.1 1334681 1335736 R PFAM: PhoH family protein; KEGG: ypi:YpsIP31758_2916 PhoH family protein; PhoH family protein complement(1334681..1335736) Serratia proteamaculans 568 5603390 YP_001477451.1 CDS Spro_1219 NC_009832.1 1335951 1336286 R TIGRFAM: alkylphosphonate utilization operon protein PhnA; PFAM: PhnA protein; KEGG: stm:STM4289 putative alkylphosphonate uptake protein in phosphonate metabolism; hypothetical protein complement(1335951..1336286) Serratia proteamaculans 568 5603497 YP_001477452.1 CDS Spro_1220 NC_009832.1 1336426 1337850 R KEGG: yen:YE2985 putative tRNA-thiotransferase; TIGRFAM: RNA modification enzyme, MiaB family; tRNA-i(6)A37 thiotransferase enzyme MiaB; PFAM: deoxyribonuclease/rho motif-related TRAM; Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB; tRNA-i(6)A37 thiotransferase protein MiaB complement(1336426..1337850) Serratia proteamaculans 568 5603498 YP_001477453.1 CDS ubiF NC_009832.1 1337990 1339231 D catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol; functions in the biosynthesis of ubiquinone or coenzyme Q; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase 1337990..1339231 Serratia proteamaculans 568 5603499 YP_001477454.1 CDS asnB NC_009832.1 1340143 1341807 R functions in asparagine biosynthesis; converts glutamine, aspartate, ATP, and water to glutamate, asparagine, pyrophosphate and AMP; asparagine synthetase B complement(1340143..1341807) Serratia proteamaculans 568 5607117 YP_001477455.1 CDS Spro_1223 NC_009832.1 1342097 1343551 R PFAM: glycoside hydrolase family 18; Carbohydrate-binding family V/XII; Fibronectin type III domain protein; KEGG: pfl:PFL_2091 chitinase; glycoside hydrolase family protein complement(1342097..1343551) Serratia proteamaculans 568 5603506 YP_001477456.1 CDS Spro_1224 NC_009832.1 1343730 1344482 R TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: yen:YE2982 putative N-acetylglucosamine metabolism protein; UMP phosphatase complement(1343730..1344482) Serratia proteamaculans 568 5603507 YP_001477457.1 CDS Spro_1225 NC_009832.1 1344550 1345770 R PFAM: ROK family protein; KEGG: yen:YE2981 putative N-acetylglucosamine regulatory protein; ROK family protein complement(1344550..1345770) Serratia proteamaculans 568 5603586 YP_001477458.1 CDS nagA NC_009832.1 1345798 1346937 R catalyzes the formation of glucosamine 6-phosphate from N-acetylglucosamine 6-phosphate; N-acetylglucosamine-6-phosphate deacetylase complement(1345798..1346937) Serratia proteamaculans 568 5603587 YP_001477459.1 CDS nagB NC_009832.1 1346956 1347756 R catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate; glucosamine-6-phosphate deaminase complement(1346956..1347756) Serratia proteamaculans 568 5603588 YP_001477460.1 CDS Spro_1228 NC_009832.1 1348091 1350037 D phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system N-acetyl glucosamine specific transporter subunits IIABC 1348091..1350037 Serratia proteamaculans 568 5603592 YP_001477461.1 CDS Spro_1229 NC_009832.1 1350279 1351943 D catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase 1350279..1351943 Serratia proteamaculans 568 5603593 YP_001477462.1 CDS Spro_1230 NC_009832.1 1352524 1353927 D PFAM: outer membrane porin; KEGG: ecv:APECO1_1383 hypothetical protein; outer membrane porin 1352524..1353927 Serratia proteamaculans 568 5603594 YP_001477463.1 CDS Spro_1231 NC_009832.1 1353987 1354313 D KEGG: yen:YE2975 putative lipoprotein; putative lipoprotein 1353987..1354313 Serratia proteamaculans 568 5603681 YP_001477464.1 CDS Spro_1232 NC_009832.1 1354328 1356985 D PFAM: Carbohydrate-binding chitobiase/hexosaminidase-type domain protein; glycoside hydrolase family 20 domain protein; Beta-N-acetylhexosaminidase-like; Glycoside hydrolase, family 20, catalytic core; KEGG: yen:YE2974 chitobiase precursor; beta-N-acetylhexosaminidase 1354328..1356985 Serratia proteamaculans 568 5603682 YP_001477465.1 CDS Spro_1233 NC_009832.1 1357062 1358207 D PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE0648 sugar efflux transporter; major facilitator transporter 1357062..1358207 Serratia proteamaculans 568 5603729 YP_001477466.1 CDS Spro_1234 NC_009832.1 1358257 1359309 D TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: plu:plu4831 UDP-glucose 4-epimerase (galactowaldenase) (UDP-galactose 4-epimerase); UDP-glucose 4-epimerase 1358257..1359309 Serratia proteamaculans 568 5603730 YP_001477467.1 CDS Spro_1235 NC_009832.1 1359299 1361260 D hypothetical protein 1359299..1361260 Serratia proteamaculans 568 5603731 YP_001477468.1 CDS fur NC_009832.1 1361468 1361914 R negatively regulates a number of operons that encode enzymes involved in iron transport; activated by manganese; forms a homodimer; ferric uptake regulator complement(1361468..1361914) Serratia proteamaculans 568 5603767 YP_001477469.1 CDS Spro_1237 NC_009832.1 1362235 1362774 R TIGRFAM: flavodoxin; PFAM: flavodoxin/nitric oxide synthase; KEGG: yen:YE2972 flavodoxin 1; flavodoxin complement(1362235..1362774) Serratia proteamaculans 568 5603768 YP_001477470.1 CDS Spro_1238 NC_009832.1 1363003 1363290 R PFAM: CopG domain protein DNA-binding domain protein; KEGG: ypi:YpsIP31758_2899 transcriptional regulator, CopG family; LexA regulated protein complement(1363003..1363290) Serratia proteamaculans 568 5603769 YP_001477471.1 CDS Spro_1239 NC_009832.1 1363583 1364356 R PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: yen:YE2969 hypothetical protein; alpha/beta hydrolase fold domain-containing protein complement(1363583..1364356) Serratia proteamaculans 568 5603953 YP_001477472.1 CDS Spro_1240 NC_009832.1 1364723 1365262 D negative modulator of the initiation of chromosome replication; replication initiation regulator SeqA 1364723..1365262 Serratia proteamaculans 568 5603954 YP_001477473.1 CDS Spro_1241 NC_009832.1 1365339 1366982 D catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; phosphoglucomutase 1365339..1366982 Serratia proteamaculans 568 5603955 YP_001477474.1 CDS Spro_1242 NC_009832.1 1367168 1367824 D PFAM: transcriptional regulator PadR family protein; KEGG: ypi:YpsIP31758_0905 transcriptional regulator, PadR family; PadR-like family transcriptional regulator 1367168..1367824 Serratia proteamaculans 568 5603968 YP_001477475.1 CDS Spro_1243 NC_009832.1 1367824 1368123 D KEGG: yen:YE1258 hypothetical protein; hypothetical protein 1367824..1368123 Serratia proteamaculans 568 5603969 YP_001477476.1 CDS Spro_1244 NC_009832.1 1368151 1368840 R response regulator in two-component regulatory system with KdpD; regulates the kdp operon involved in potassium transport; DNA-binding transcriptional activator KdpE complement(1368151..1368840) Serratia proteamaculans 568 5603970 YP_001477477.1 CDS Spro_1245 NC_009832.1 1368859 1371552 R sensory histidine kinase in two-component regulatory system with KdpE; signal sensing protein; sensor protein KdpD complement(1368859..1371552) Serratia proteamaculans 568 5604004 YP_001477478.1 CDS Spro_1246 NC_009832.1 1371632 1372201 R One of the components of the high-affinity ATP-driven potassium transport (or KDP)system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex; potassium-transporting ATPase subunit C complement(1371632..1372201) Serratia proteamaculans 568 5604005 YP_001477479.1 CDS Spro_1247 NC_009832.1 1372221 1374290 R One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit B complement(1372221..1374290) Serratia proteamaculans 568 5604006 YP_001477480.1 CDS Spro_1248 NC_009832.1 1374317 1376005 R catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit A complement(1374317..1376005) Serratia proteamaculans 568 5604266 YP_001477481.1 CDS kdpF NC_009832.1 1376005 1376094 R one of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit F complement(1376005..1376094) Serratia proteamaculans 568 5604267 YP_001477482.1 CDS Spro_1250 NC_009832.1 1376539 1376745 D KEGG: eca:ECA1344 hypothetical protein; hypothetical protein 1376539..1376745 Serratia proteamaculans 568 5604268 YP_001477483.1 CDS Spro_1251 NC_009832.1 1376889 1377842 D PFAM: protein of unknown function DUF523; Protein of unknown function DUF1722; KEGG: eca:ECA1348 hypothetical protein; hypothetical protein 1376889..1377842 Serratia proteamaculans 568 5604281 YP_001477484.1 CDS Spro_1252 NC_009832.1 1377858 1379288 D UV-induced DNA repair; converts cyclobutane-type pyrimidine dimers created during exposure to UV ratiation to monomers; light dependent; deoxyribodipyrimidine photolyase 1377858..1379288 Serratia proteamaculans 568 5604282 YP_001477485.1 CDS Spro_1253 NC_009832.1 1379311 1380291 D PFAM: cyclic-AMP phosphodiesterase class-II; KEGG: yen:YE2956 putative 3',5'-cyclic-nucleotide phosphodiesterase; cyclic-AMP phosphodiesterase 1379311..1380291 Serratia proteamaculans 568 5604309 YP_001477486.1 CDS Spro_1254 NC_009832.1 1380309 1381052 D PFAM: protein of unknown function DUF34; KEGG: eca:ECA1350 hypothetical protein; putative hydrolase-oxidase 1380309..1381052 Serratia proteamaculans 568 5604310 YP_001477487.1 CDS Spro_1255 NC_009832.1 1381204 1381860 D PFAM: Allophanate hydrolase subunit 1; KEGG: yen:YE2955A hypothetical protein; allophanate hydrolase subunit 1 1381204..1381860 Serratia proteamaculans 568 5604311 YP_001477488.1 CDS Spro_1256 NC_009832.1 1381854 1382786 D TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; KEGG: yps:YPTB2909 hypothetical protein; urea amidolyase-like protein 1381854..1382786 Serratia proteamaculans 568 5604472 YP_001477489.1 CDS Spro_1257 NC_009832.1 1382776 1383513 D PFAM: LamB/YcsF family protein; KEGG: yen:YE2953 hypothetical protein; LamB/YcsF family protein 1382776..1383513 Serratia proteamaculans 568 5604473 YP_001477490.1 CDS Spro_1258 NC_009832.1 1383574 1384305 D PFAM: protein of unknown function DUF969; KEGG: ypi:YpsIP31758_1118 hypothetical protein; hypothetical protein 1383574..1384305 Serratia proteamaculans 568 5604474 YP_001477491.1 CDS Spro_1259 NC_009832.1 1384302 1385321 D PFAM: protein of unknown function DUF979; KEGG: ypi:YpsIP31758_1119 hypothetical protein; hypothetical protein 1384302..1385321 Serratia proteamaculans 568 5604540 YP_001477492.1 CDS Spro_1260 NC_009832.1 1385331 1385975 D catalyzes the removal of 5-oxoproline from various penultimate amino acid residues except L-proline; pyrrolidone-carboxylate peptidase 1385331..1385975 Serratia proteamaculans 568 5604541 YP_001477493.1 CDS Spro_1261 NC_009832.1 1386032 1386823 D 5-formyluracil/5-hydroxymethyluracil DNA glycosylase; involved in base excision repair of DNA damaged by oxidation or by mutagenic agents; acts as DNA glycosylase that recognizes and removes damaged bases with a preference for oxidized pyrimidines; has apurinic/apyrimidinic lyase activity; endonuclease VIII 1386032..1386823 Serratia proteamaculans 568 5604542 YP_001477494.1 CDS gltA NC_009832.1 1386931 1388223 R type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; type II citrate synthase complement(1386931..1388223) Serratia proteamaculans 568 5604548 YP_001477495.1 CDS sdhC NC_009832.1 1388957 1389346 D TIGRFAM: Succinate dehydrogenase cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: yps:YPTB1143 succinate dehydrogenase cytochrome b-556 subunit; succinate dehydrogenase cytochrome b556 large membrane subunit 1388957..1389346 Serratia proteamaculans 568 5604549 YP_001477496.1 CDS sdhD NC_009832.1 1389340 1389687 D TIGRFAM: Succinate dehydrogenase hydrophobic membrane anchor; KEGG: yen:YE2947 succinate dehydrogenase hydrophobic membrane anchor protein; succinate dehydrogenase cytochrome b556 small membrane subunit 1389340..1389687 Serratia proteamaculans 568 5604550 YP_001477497.1 CDS sdhA NC_009832.1 1389689 1391455 D part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 1389689..1391455 Serratia proteamaculans 568 5604581 YP_001477498.1 CDS sdhB NC_009832.1 1391472 1392188 D part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit 1391472..1392188 Serratia proteamaculans 568 5604582 YP_001477499.1 CDS sucA NC_009832.1 1392465 1395278 D SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component 1392465..1395278 Serratia proteamaculans 568 5604583 YP_001477500.1 CDS Spro_1268 NC_009832.1 1395290 1396504 D component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA; dihydrolipoamide succinyltransferase 1395290..1396504 Serratia proteamaculans 568 5604628 YP_001477501.1 CDS sucC NC_009832.1 1396622 1397788 D catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 1396622..1397788 Serratia proteamaculans 568 5604629 YP_001477502.1 CDS Spro_1270 NC_009832.1 1397788 1398660 D TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: ent:Ent638_1229 succinyl-CoA synthetase, alpha subunit; succinyl-CoA synthetase subunit alpha 1397788..1398660 Serratia proteamaculans 568 5604630 YP_001477503.1 CDS Spro_1271 NC_009832.1 1399442 1401010 D PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: eca:ECA1365 cytochrome D ubiquinol oxidase subunit I; cytochrome bd ubiquinol oxidase subunit I 1399442..1401010 Serratia proteamaculans 568 5604753 YP_001477504.1 CDS Spro_1272 NC_009832.1 1401025 1402164 D KEGG: yen:YE2938 cytochrome d ubiquinol oxidase subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; cytochrome d ubiquinol oxidase subunit II 1401025..1402164 Serratia proteamaculans 568 5604754 YP_001477505.1 CDS Spro_1273 NC_009832.1 1402182 1402295 D TIGRFAM: cyd operon protein YbgT; PFAM: membrane bound YbgT family protein; KEGG: sdy:SDY_0682 putative outer membrane lipoprotein; cyd operon protein YbgT 1402182..1402295 Serratia proteamaculans 568 5604755 YP_001477506.1 CDS Spro_1274 NC_009832.1 1402295 1402591 D TIGRFAM: cyd operon protein YbgE; PFAM: Cyd operon protein YbgE; KEGG: eca:ECA1368 hypothetical protein; hypothetical protein 1402295..1402591 Serratia proteamaculans 568 5604756 YP_001477507.1 CDS Spro_1275 NC_009832.1 1402722 1403126 D catalyzes the hydrolysis of short chain aliphatic acyl-CoA thioesters; physiological role remains unknown; involved in phospholipid metabolism; part of the Tol/Pal system of proteins that are critical for maintaining the integrity of the cell envelope components; acyl-CoA thioester hydrolase YbgC 1402722..1403126 Serratia proteamaculans 568 5604757 YP_001477508.1 CDS Spro_1276 NC_009832.1 1403132 1403806 D membrane spanning protein in TolA-TolQ-TolR complex; involved in the tonB-independent uptake of group A colicins; colicin uptake protein TolQ 1403132..1403806 Serratia proteamaculans 568 5604761 YP_001477509.1 CDS Spro_1277 NC_009832.1 1403819 1404247 D membrane spanning protein in TolA-TolQ-TolR complex; involved in the tonB-independent uptake of group A colicins; colicin uptake protein TolR 1403819..1404247 Serratia proteamaculans 568 5604762 YP_001477510.1 CDS tolA NC_009832.1 1404329 1405567 D inner membrane component of 7 member Tol-Pal envelope-spanning complex; involved in maintaining cell envelope integrity; utilized by colicins and filamentous phages for import; interacts with TolB, Pal, and through TolB to various outer membrane porins; cell envelope integrity inner membrane protein TolA 1404329..1405567 Serratia proteamaculans 568 5604763 YP_001477511.1 CDS tolB NC_009832.1 1405700 1406992 D forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB 1405700..1406992 Serratia proteamaculans 568 5604787 YP_001477512.1 CDS Spro_1280 NC_009832.1 1407037 1407552 D TIGRFAM: Peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: yen:YE2931 peptidoglycan-associated lipoprotein Pal; peptidoglycan-associated outer membrane lipoprotein 1407037..1407552 Serratia proteamaculans 568 5604788 YP_001477513.1 CDS Spro_1281 NC_009832.1 1407562 1408362 D periplasmic protein that interacts with TolA; the tol-pal system is probably involved in maintaining cell envelope integrity; tol-pal system protein YbgF 1407562..1408362 Serratia proteamaculans 568 5604789 YP_001477514.1 CDS Spro_1282 NC_009832.1 1409507 1410568 D 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 1409507..1410568 Serratia proteamaculans 568 5605367 YP_001477515.1 CDS Spro_1283 NC_009832.1 1410590 1411315 D TIGRFAM: nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC; KEGG: yen:YE2927 intergral membrane NMN transport protein PnuC; nicotinamide mononucleotide transporter PnuC 1410590..1411315 Serratia proteamaculans 568 5604802 YP_001477516.1 CDS Spro_1284 NC_009832.1 1411353 1412303 R involved in zinc efflux across the cytoplasmic membrane; zinc transporter ZitB complement(1411353..1412303) Serratia proteamaculans 568 5604803 YP_001477517.1 CDS Spro_1285 NC_009832.1 1412303 1415515 R PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; SMART: extracellular solute-binding protein family 3; KEGG: pfo:Pfl_1864 Hpt sensor hybrid histidine kinase; Hpt sensor hybrid histidine kinase complement(1412303..1415515) Serratia proteamaculans 568 5604871 YP_001477518.1 CDS Spro_1286 NC_009832.1 1415512 1416153 R PFAM: regulatory protein LuxR; response regulator receiver; KEGG: pfl:PFL_2955 DNA-binding response regulator, LuxR family; two component LuxR family transcriptional regulator complement(1415512..1416153) Serratia proteamaculans 568 5604872 YP_001477519.1 CDS Spro_1287 NC_009832.1 1416323 1417378 D catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 1416323..1417378 Serratia proteamaculans 568 5604873 YP_001477520.1 CDS gpmA NC_009832.1 1417448 1418200 R 2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase complement(1417448..1418200) Serratia proteamaculans 568 5604955 YP_001477521.1 CDS Spro_1289 NC_009832.1 1418414 1418752 R PFAM: PsiF repeat protein; KEGG: yen:YE2921 putative starvation-inducible protein; PsiF repeat-containing protein complement(1418414..1418752) Serratia proteamaculans 568 5604956 YP_001477522.1 CDS Spro_1290 NC_009832.1 1418949 1419992 R KEGG: yps:YPTB1168 aldose 1-epimerase (mutarotase); TIGRFAM: galactose mutarotase; PFAM: Aldose 1-epimerase; galactose mutarotase complement(1418949..1419992) Serratia proteamaculans 568 5604957 YP_001477523.1 CDS Spro_1291 NC_009832.1 1419986 1421137 R catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism; galactokinase complement(1419986..1421137) Serratia proteamaculans 568 5605000 YP_001477524.1 CDS Spro_1292 NC_009832.1 1421134 1422186 R catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P; galactose-1-phosphate uridylyltransferase complement(1421134..1422186) Serratia proteamaculans 568 5605001 YP_001477525.1 CDS Spro_1293 NC_009832.1 1422472 1423290 R PFAM: Abortive infection protein; KEGG: ypi:YpsIP31758_2854 CAAX amino terminal protease family protein; abortive infection protein complement(1422472..1423290) Serratia proteamaculans 568 5605070 YP_001477526.1 CDS Spro_1294 NC_009832.1 1423444 1424016 R PFAM: isochorismatase hydrolase; KEGG: aha:AHA_3239 isochorismatase family protein; isochorismatase hydrolase complement(1423444..1424016) Serratia proteamaculans 568 5605071 YP_001477527.1 CDS Spro_1295 NC_009832.1 1424134 1425606 R contains 2 ATP-binding cassettes; involved in the transport of molybdenum; putative molybdenum transport ATP-binding protein ModF complement(1424134..1425606) Serratia proteamaculans 568 5605072 YP_001477528.1 CDS Spro_1296 NC_009832.1 1425697 1426488 R represses the modABCD operon and activates the moaABCD and napFDAGHBC operons; DNA-binding transcriptional regulator ModE complement(1425697..1426488) Serratia proteamaculans 568 5605112 YP_001477529.1 CDS Spro_1297 NC_009832.1 1426693 1428858 D TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mms:mma_0066 TonB-dependent receptor; TonB-dependent siderophore receptor 1426693..1428858 Serratia proteamaculans 568 5605113 YP_001477530.1 CDS Spro_1298 NC_009832.1 1428866 1429867 D PFAM: periplasmic binding protein; KEGG: msm:MSMEG_4561 ABC Fe3+-siderophores transporter, periplasmic binding protein; periplasmic binding protein 1428866..1429867 Serratia proteamaculans 568 5605114 YP_001477531.1 CDS Spro_1299 NC_009832.1 1429869 1430624 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: pau:PA14_39660 hypothetical protein; type 12 methyltransferase 1429869..1430624 Serratia proteamaculans 568 5605115 YP_001477532.1 CDS Spro_1300 NC_009832.1 1430626 1431672 D PFAM: transport system permease protein; KEGG: msm:MSMEG_4559 ABC transporter, membrane spanning protein; transport system permease 1430626..1431672 Serratia proteamaculans 568 5605116 YP_001477533.1 CDS Spro_1301 NC_009832.1 1431669 1432454 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cmi:CMM_0365 putative Fe3+-siderophore ABC transporter, ATPase component; ABC transporter-like protein 1431669..1432454 Serratia proteamaculans 568 5605117 YP_001477534.1 CDS Spro_1302 NC_009832.1 1432623 1432766 D KEGG: ypi:YpsIP31758_2851 hypothetical protein; hypothetical protein 1432623..1432766 Serratia proteamaculans 568 5605229 YP_001477535.1 CDS modA NC_009832.1 1433053 1433826 D with ModCB is involved in the high-affinity transport of molybdate; molybdate transporter periplasmic protein 1433053..1433826 Serratia proteamaculans 568 5605230 YP_001477536.1 CDS modB NC_009832.1 1433823 1434512 D part of ModCBA molybdate transporter; member of ABC superfamily; inner membrane component; regulated by repressor protein ModE; molybdate ABC transporter permease 1433823..1434512 Serratia proteamaculans 568 5605231 YP_001477537.1 CDS modC NC_009832.1 1434513 1435580 D Part of the ABC transporter complex modABC involved in molybdenum import; molybdate transporter ATP-binding protein 1434513..1435580 Serratia proteamaculans 568 5605235 YP_001477538.1 CDS Spro_1306 NC_009832.1 1435613 1436437 R YbhA; catalyzes the dephosphorylation of pyridoxal phosphate, fructose 1,6-bisphosphate, erythrose 4-phosphate and p-nitrophenyl phosphate; purine and pyrimidine nucleotides are secondary substrates; phosphotransferase activity observed when using monophosphates as phosphate donor; member of the haloacid dehalogenase-like hydrolases superfamily; phosphotransferase complement(1435613..1436437) Serratia proteamaculans 568 5605236 YP_001477539.1 CDS Spro_1307 NC_009832.1 1436605 1437600 D catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate; 6-phosphogluconolactonase 1436605..1437600 Serratia proteamaculans 568 5605237 YP_001477540.1 CDS Spro_1308 NC_009832.1 1437643 1438125 R YbhB; similar to rat and human kinase inhibitory proteins; putative kinase inhibitor protein complement(1437643..1438125) Serratia proteamaculans 568 5605357 YP_001477541.1 CDS Spro_1309 NC_009832.1 1438292 1438693 D PFAM: protein of unknown function DUF1232; KEGG: gme:Gmet_2189 protein of unknown function DUF1232; hypothetical protein 1438292..1438693 Serratia proteamaculans 568 5605358 YP_001477542.1 CDS Spro_1310 NC_009832.1 1438698 1439990 R catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate; adenosylmethionine--8-amino-7-oxononanoate transaminase complement(1438698..1439990) Serratia proteamaculans 568 5605359 YP_001477543.1 CDS Spro_1311 NC_009832.1 1440062 1441099 D KEGG: eca:ECA2825 biotin synthase; TIGRFAM: biotin synthase; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB; biotin synthase 1440062..1441099 Serratia proteamaculans 568 5605372 YP_001477544.1 CDS Spro_1312 NC_009832.1 1441099 1442250 D catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine; 8-amino-7-oxononanoate synthase 1441099..1442250 Serratia proteamaculans 568 5605373 YP_001477545.1 CDS Spro_1313 NC_009832.1 1442234 1443001 D TIGRFAM: biotin biosynthesis protein BioC; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: ypi:YpsIP31758_2842 biotin biosynthesis protein BioC; biotin biosynthesis protein BioC 1442234..1443001 Serratia proteamaculans 568 5605386 YP_001477546.1 CDS bioD NC_009832.1 1442994 1443674 D DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase 1442994..1443674 Serratia proteamaculans 568 5605387 YP_001477547.1 CDS Spro_1315 NC_009832.1 1443732 1445402 R hypothetical protein complement(1443732..1445402) Serratia proteamaculans 568 5605388 YP_001477548.1 CDS Spro_1316 NC_009832.1 1445593 1446303 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: yen:YE2903 putative amino acid transporter; ABC transporter-like protein complement(1445593..1446303) Serratia proteamaculans 568 5605515 YP_001477549.1 CDS Spro_1317 NC_009832.1 1447442 1449454 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 1447442..1449454 Serratia proteamaculans 568 5605516 YP_001477550.1 CDS Spro_1318 NC_009832.1 1449562 1449819 D KEGG: ypi:YpsIP31758_2838 hypothetical protein; hypothetical protein 1449562..1449819 Serratia proteamaculans 568 5605517 YP_001477551.1 CDS Spro_1319 NC_009832.1 1449824 1450741 R PFAM: protein of unknown function UPF0052 and CofD; KEGG: ypi:YpsIP31758_2837 hypothetical protein; hypothetical protein complement(1449824..1450741) Serratia proteamaculans 568 5605518 YP_001477552.1 CDS moaA NC_009832.1 1451134 1452117 D together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 1451134..1452117 Serratia proteamaculans 568 5605519 YP_001477553.1 CDS Spro_1321 NC_009832.1 1452145 1452657 D TIGRFAM: molybdenum cofactor synthesis domain; molybdenum cofactor biosynthesis protein B; PFAM: molybdopterin binding domain; KEGG: kpn:KPN_00811 molybdopterin biosynthesis protein B; molybdenum cofactor biosynthesis protein B 1452145..1452657 Serratia proteamaculans 568 5605520 YP_001477554.1 CDS moaC NC_009832.1 1452663 1453142 D MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC 1452663..1453142 Serratia proteamaculans 568 5605555 YP_001477555.1 CDS moaD NC_009832.1 1453139 1453384 D catalyzes the conversion of molybdopterin precursor Z into molybdopterin; molybdopterin synthase small subunit 1453139..1453384 Serratia proteamaculans 568 5605556 YP_001477556.1 CDS moaE NC_009832.1 1453384 1453854 D catalyzes the conversion of molybdopterin precursor Z into molybdopterin; molybdopterin guanine dinucleotide biosynthesis protein MoaE 1453384..1453854 Serratia proteamaculans 568 5605557 YP_001477557.1 CDS Spro_1325 NC_009832.1 1454109 1454819 D PFAM: protein of unknown function UPF0005; KEGG: eca:ECA2812 putative membrane protein; hypothetical protein 1454109..1454819 Serratia proteamaculans 568 5605589 YP_001477558.1 CDS Spro_1326 NC_009832.1 1454989 1456095 R PFAM: ABC-2 type transporter; KEGG: ypi:YpsIP31758_2815 ABC transporter, permease protein; ABC-2 type transporter complement(1454989..1456095) Serratia proteamaculans 568 5605590 YP_001477559.1 CDS Spro_1327 NC_009832.1 1456106 1457260 R PFAM: ABC-2 type transporter; KEGG: yen:YE2893 hypothetical protein; ABC-2 type transporter complement(1456106..1457260) Serratia proteamaculans 568 5605591 YP_001477560.1 CDS Spro_1328 NC_009832.1 1457257 1458987 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ypi:YpsIP31758_2813 ABC transporter, ATP-binding protein; ABC transporter-like protein complement(1457257..1458987) Serratia proteamaculans 568 5605596 YP_001477561.1 CDS Spro_1329 NC_009832.1 1458998 1459984 R PFAM: secretion protein HlyD family protein; KEGG: yen:YE2891 HlyD family secretion protein; hypothetical protein complement(1458998..1459984) Serratia proteamaculans 568 5605597 YP_001477562.1 CDS Spro_1330 NC_009832.1 1460119 1460817 R PFAM: regulatory protein TetR; Transcriptional regulator TetR; KEGG: ypi:YpsIP31758_2811 transcriptional regulator, TetR family; putative DNA-binding transcriptional regulator complement(1460119..1460817) Serratia proteamaculans 568 5605598 YP_001477563.1 CDS Spro_1331 NC_009832.1 1461123 1462493 D this helicase is not essential cell growth; ATP-dependent RNA helicase RhlE 1461123..1462493 Serratia proteamaculans 568 5605664 YP_001477564.1 CDS Spro_1332 NC_009832.1 1462704 1463732 R PFAM: secretion protein HlyD family protein; KEGG: ppu:PP_1272 multidrug efflux MFS membrane fusion protein, putative; secretion protein HlyD family protein complement(1462704..1463732) Serratia proteamaculans 568 5605665 YP_001477565.1 CDS Spro_1333 NC_009832.1 1463735 1465342 R PFAM: major facilitator superfamily MFS_1; KEGG: pfo:Pfl_0142 major facilitator superfamily MFS_1; major facilitator transporter complement(1463735..1465342) Serratia proteamaculans 568 5605685 YP_001477566.1 CDS Spro_1334 NC_009832.1 1465503 1466282 D PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: ftn:FTN_0720 transcriptional regulator, IclR family; IclR family transcriptional regulator 1465503..1466282 Serratia proteamaculans 568 5605686 YP_001477567.1 CDS Spro_1335 NC_009832.1 1466295 1466744 D PFAM: UspA domain protein; KEGG: pen:PSEEN4556 universal stress protein family; UspA domain-containing protein 1466295..1466744 Serratia proteamaculans 568 5605687 YP_001477568.1 CDS Spro_1336 NC_009832.1 1466769 1467728 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: sco:SCO2696 2-hydroxyacid-family dehydrogenase; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 1466769..1467728 Serratia proteamaculans 568 5605721 YP_001477569.1 CDS Spro_1337 NC_009832.1 1467809 1468738 D PFAM: dihydrouridine synthase DuS; KEGG: ypi:YpsIP31758_2808 tRNA-dihydrouridine synthase; tRNA-dihydrouridine synthase C 1467809..1468738 Serratia proteamaculans 568 5605722 YP_001477570.1 CDS Spro_1338 NC_009832.1 1468841 1469602 R PFAM: N-acetyltransferase; KEGG: mxa:MXAN_1194 N-acetyltransferase family protein; N-acetyltransferase complement(1468841..1469602) Serratia proteamaculans 568 5605723 YP_001477571.1 CDS Spro_1339 NC_009832.1 1469678 1470616 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B0248 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(1469678..1470616) Serratia proteamaculans 568 5605736 YP_001477572.1 CDS Spro_1340 NC_009832.1 1470710 1471552 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: pfl:PFL_0285 hypothetical protein; hypothetical protein 1470710..1471552 Serratia proteamaculans 568 5605737 YP_001477573.1 CDS Spro_1341 NC_009832.1 1471577 1472476 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: kpn:KPN_02452 putative bacterial regulatory protein, LysR; LysR family transcriptional regulator complement(1471577..1472476) Serratia proteamaculans 568 5605738 YP_001477574.1 CDS Spro_1342 NC_009832.1 1472609 1473190 D hypothetical protein 1472609..1473190 Serratia proteamaculans 568 5605769 YP_001477575.1 CDS Spro_1343 NC_009832.1 1473187 1474485 R PFAM: polysaccharide biosynthesis protein; KEGG: afw:Anae109_1236 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein complement(1473187..1474485) Serratia proteamaculans 568 5605770 YP_001477576.1 CDS Spro_1344 NC_009832.1 1474640 1475494 D KEGG: bca:BCE_5388 hypothetical protein; hypothetical protein 1474640..1475494 Serratia proteamaculans 568 5605771 YP_001477577.1 CDS Spro_1345 NC_009832.1 1475510 1476412 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pin:Ping_2316 transcriptional regulator, substrate-binding of LysR family protein; LysR family transcriptional regulator complement(1475510..1476412) Serratia proteamaculans 568 5605789 YP_001477578.1 CDS Spro_1346 NC_009832.1 1476506 1477303 D KEGG: yen:YE2064 hypothetical protein; hypothetical protein 1476506..1477303 Serratia proteamaculans 568 5605790 YP_001477579.1 CDS Spro_1347 NC_009832.1 1477531 1478994 R PFAM: amino acid permease-associated region; KEGG: ypi:YpsIP31758_2147 L-asparagine permease; amino acid permease-associated protein complement(1477531..1478994) Serratia proteamaculans 568 5605791 YP_001477580.1 CDS Spro_1348 NC_009832.1 1479483 1479920 R PFAM: transmembrane pair domain protein; KEGG: pau:PA14_28430 hypothetical protein; transmembrane pair domain-containing protein complement(1479483..1479920) Serratia proteamaculans 568 5605818 YP_001477581.1 CDS Spro_1349 NC_009832.1 1480047 1480940 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pap:PSPA7_2479 probable transcriptional regulator; LysR family transcriptional regulator 1480047..1480940 Serratia proteamaculans 568 5605819 YP_001477582.1 CDS Spro_1350 NC_009832.1 1480964 1481527 R PFAM: SNARE associated Golgi protein; KEGG: sdy:SDY_2152 hypothetical protein; hypothetical protein complement(1480964..1481527) Serratia proteamaculans 568 5605820 YP_001477583.1 CDS Spro_1351 NC_009832.1 1481623 1482726 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; S-adenosyl-L-homocysteine hydrolase, NAD binding; KEGG: kpn:KPN_02462 putative S-adenosylhomocysteine hydrolase; adenosylhomocysteinase 1481623..1482726 Serratia proteamaculans 568 5605872 YP_001477584.1 CDS pbpG NC_009832.1 1482888 1483817 D specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi; Penicillin-binding protein 7; D-alanyl-D-alanine endopeptidase 1482888..1483817 Serratia proteamaculans 568 5605873 YP_001477585.1 CDS Spro_1353 NC_009832.1 1483979 1484389 D PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: oan:Oant_1566 3-demethylubiquinone-9 3-methyltransferase; 3-demethylubiquinone-9 3-methyltransferase 1483979..1484389 Serratia proteamaculans 568 5605895 YP_001477586.1 CDS Spro_1354 NC_009832.1 1484465 1484842 R hypothetical protein complement(1484465..1484842) Serratia proteamaculans 568 5605896 YP_001477587.1 CDS Spro_1355 NC_009832.1 1485546 1486466 D PFAM: protein of unknown function DUF808; KEGG: pap:PSPA7_3434 hypothetical protein; hypothetical protein 1485546..1486466 Serratia proteamaculans 568 5605897 YP_001477588.1 CDS Spro_1356 NC_009832.1 1486499 1487044 R PFAM: GCN5-related N-acetyltransferase; KEGG: kpn:KPN_02570 hypothetical acetyltransferase; GCN5-like N-acetyltransferase complement(1486499..1487044) Serratia proteamaculans 568 5605915 YP_001477589.1 CDS Spro_1357 NC_009832.1 1487170 1488198 R PFAM: regulatory protein MerR; Albicidin resistance; Transcription regulator MerR DNA binding; KEGG: kpn:KPN_02240 putative albicidin resistance protein; MerR family transcriptional regulator complement(1487170..1488198) Serratia proteamaculans 568 5605916 YP_001477590.1 CDS Spro_1358 NC_009832.1 1488418 1488870 R KEGG: ecs:ECs4710 hypothetical protein; hypothetical protein complement(1488418..1488870) Serratia proteamaculans 568 5605917 YP_001477591.1 CDS Spro_1359 NC_009832.1 1489026 1489838 R TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: eca:ECA1498 lipoprotein-28 precursor; YaeC family lipoprotein complement(1489026..1489838) Serratia proteamaculans 568 5605937 YP_001477592.1 CDS Spro_1360 NC_009832.1 1489970 1490806 R PFAM: protein of unknown function DUF1460; KEGG: pfl:PFL_0370 lipoprotein, putative; hypothetical protein complement(1489970..1490806) Serratia proteamaculans 568 5605938 YP_001477593.1 CDS Spro_1361 NC_009832.1 1490911 1491453 R PFAM: GCN5-related N-acetyltransferase; KEGG: pfo:Pfl_2189 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase complement(1490911..1491453) Serratia proteamaculans 568 5605939 YP_001477594.1 CDS Spro_1362 NC_009832.1 1491450 1491920 R PFAM: transferase hexapeptide repeat containing protein; KEGG: kpn:KPN_04414 UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase; hexapaptide repeat-containing transferase complement(1491450..1491920) Serratia proteamaculans 568 5605973 YP_001477595.1 CDS Spro_1363 NC_009832.1 1492125 1492715 D PFAM: protein of unknown function DUF1282; KEGG: yen:YE2135 hypothetical protein; hypothetical protein 1492125..1492715 Serratia proteamaculans 568 5605974 YP_001477596.1 CDS Spro_1364 NC_009832.1 1492785 1494485 R component of the membrane-bound D-lactate oxidase, FAD-binding, NADH independent; D-lactate dehydrogenase complement(1492785..1494485) Serratia proteamaculans 568 5605975 YP_001477597.1 CDS Spro_1365 NC_009832.1 1494669 1495463 R TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: kpn:KPN_01674 methionine aminopeptidase; methionine aminopeptidase complement(1494669..1495463) Serratia proteamaculans 568 5605979 YP_001477598.1 CDS Spro_1366 NC_009832.1 1495460 1495675 R KEGG: pen:PSEEN1416 hypothetical protein; hypothetical protein complement(1495460..1495675) Serratia proteamaculans 568 5605980 YP_001477599.1 CDS Spro_1367 NC_009832.1 1495833 1496936 D KEGG: yen:YE3211 D-alanine--D-alanine ligase A; TIGRFAM: D-alanine--D-alanine ligase; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; D-alanine--D-alanine ligase domain protein; D-alanine--D-alanine ligase 1495833..1496936 Serratia proteamaculans 568 5605981 YP_001477600.1 CDS Spro_1368 NC_009832.1 1497105 1497884 R PFAM: extracellular solute-binding protein family 3; KEGG: bam:Bamb_0110 extracellular solute-binding protein, family 3; extracellular solute-binding protein complement(1497105..1497884) Serratia proteamaculans 568 5605985 YP_001477601.1 CDS Spro_1369 NC_009832.1 1497927 1499081 R catalyzes the transfer of an amino moiety; putative aminotransferase complement(1497927..1499081) Serratia proteamaculans 568 5605986 YP_001477602.1 CDS Spro_1370 NC_009832.1 1499302 1500231 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfl:PFL_4813 transcriptional regulator, LysR family; LysR family transcriptional regulator 1499302..1500231 Serratia proteamaculans 568 5605987 YP_001477603.1 CDS Spro_1371 NC_009832.1 1500348 1502645 D PFAM: glycoside hydrolase family 3 domain protein; KEGG: eca:ECA2790 periplasmic beta-glucosidase; glycoside hydrolase family 3 protein 1500348..1502645 Serratia proteamaculans 568 5606048 YP_001477604.1 CDS Spro_1372 NC_009832.1 1502814 1503863 D PFAM: periplasmic binding protein; KEGG: eca:ECA3096 ABC-transporter periplasmic-binding component; periplasmic binding protein 1502814..1503863 Serratia proteamaculans 568 5606049 YP_001477605.1 CDS Spro_1373 NC_009832.1 1503860 1504858 D PFAM: transport system permease protein; KEGG: eca:ECA3095 ABC transporter permease protein; transport system permease 1503860..1504858 Serratia proteamaculans 568 5606059 YP_001477606.1 CDS Spro_1374 NC_009832.1 1504851 1505630 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: hin:HI1470 putative iron transport system ATP-binding protein; ABC transporter-like protein 1504851..1505630 Serratia proteamaculans 568 5606060 YP_001477607.1 CDS Spro_1375 NC_009832.1 1505623 1506354 D KEGG: kpn:KPN_02127 molybdate transport protein (ABC superfamily, peri_bind); molybdate ABC transporter periplasmic substrate-binding protein 1505623..1506354 Serratia proteamaculans 568 5606061 YP_001477608.1 CDS Spro_1376 NC_009832.1 1506386 1506682 R hypothetical protein complement(1506386..1506682) Serratia proteamaculans 568 5606094 YP_001477609.1 CDS Spro_1377 NC_009832.1 1506679 1507314 R KEGG: ent:Ent638_4322 cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase complement(1506679..1507314) Serratia proteamaculans 568 5606095 YP_001477610.1 CDS Spro_1378 NC_009832.1 1507591 1507932 R PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: yen:YE2881 hypothetical protein; hypothetical protein complement(1507591..1507932) Serratia proteamaculans 568 5606096 YP_001477611.1 CDS Spro_1379 NC_009832.1 1507991 1508452 R PFAM: GCN5-related N-acetyltransferase; KEGG: ngo:NGO1928 putative acetyltransferase; GCN5-like N-acetyltransferase complement(1507991..1508452) Serratia proteamaculans 568 5606183 YP_001477612.1 CDS Spro_1380 NC_009832.1 1508505 1509398 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfo:Pfl_2438 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(1508505..1509398) Serratia proteamaculans 568 5606184 YP_001477613.1 CDS Spro_1381 NC_009832.1 1509459 1510643 R PFAM: major facilitator superfamily MFS_1; KEGG: nfa:nfa29650 putative transporter; major facilitator transporter complement(1509459..1510643) Serratia proteamaculans 568 5606185 YP_001477614.1 CDS Spro_1382 NC_009832.1 1510879 1512444 R PFAM: carbohydrate kinase FGGY; KEGG: ypi:YpsIP31758_3518 carbohydrate kinase, FGGY family; autoinducer-2 (AI-2) kinase complement(1510879..1512444) Serratia proteamaculans 568 5606195 YP_001477615.1 CDS Spro_1383 NC_009832.1 1512638 1512931 D PFAM: Antibiotic biosynthesis monooxygenase; KEGG: yen:YE0523 hypothetical protein; autoinducer-2 (AI-2) modifying protein LsrG 1512638..1512931 Serratia proteamaculans 568 5606196 YP_001477616.1 CDS Spro_1384 NC_009832.1 1513019 1513612 D PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pfo:Pfl_2164 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA 1513019..1513612 Serratia proteamaculans 568 5606197 YP_001477617.1 CDS Spro_1385 NC_009832.1 1513609 1514427 R PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: psa:PST_2925 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(1513609..1514427) Serratia proteamaculans 568 5606204 YP_001477618.1 CDS Spro_1386 NC_009832.1 1514571 1515419 R PFAM: protein of unknown function RIO1; KEGG: yen:YE1747 hypothetical protein; hypothetical protein complement(1514571..1515419) Serratia proteamaculans 568 5606205 YP_001477619.1 CDS Spro_1387 NC_009832.1 1515543 1517033 R converts 1,4-alpha-D-glucans to maltodextrin; cytoplasmic alpha-amylase complement(1515543..1517033) Serratia proteamaculans 568 5606206 YP_001477620.1 CDS Spro_1388 NC_009832.1 1517162 1517821 R PFAM: protein of unknown function DUF799; KEGG: eca:ECA4458 putative lipoprotein; hypothetical protein complement(1517162..1517821) Serratia proteamaculans 568 5606230 YP_001477621.1 CDS Spro_1389 NC_009832.1 1517818 1518174 R KEGG: yen:YE1235 putative lipoprotein; putative lipoprotein complement(1517818..1518174) Serratia proteamaculans 568 5606231 YP_001477622.1 CDS Spro_1390 NC_009832.1 1518193 1518864 R PFAM: Curli production assembly/transport component CsgG; KEGG: eca:ECA4460 putative lipoprotein; curli production assembly/transport component CsgG complement(1518193..1518864) Serratia proteamaculans 568 5606232 YP_001477623.1 CDS Spro_1391 NC_009832.1 1519330 1520253 D PFAM: GCN5-related N-acetyltransferase; regulatory protein MarR; KEGG: shn:Shewana3_3368 transcriptional regulator, MarR family with acetyltransferase activity; MarR family transcriptional regulator 1519330..1520253 Serratia proteamaculans 568 5606233 YP_001477624.1 CDS Spro_1392 NC_009832.1 1520344 1520601 R PFAM: protein of unknown function DUF1471; KEGG: yen:YE2851 hypothetical protein; hypothetical protein complement(1520344..1520601) Serratia proteamaculans 568 5606234 YP_001477625.1 CDS Spro_1393 NC_009832.1 1520805 1521062 R PFAM: protein of unknown function DUF1471; KEGG: yen:YE2851 hypothetical protein; hypothetical protein complement(1520805..1521062) Serratia proteamaculans 568 5606243 YP_001477626.1 CDS Spro_1394 NC_009832.1 1521238 1521882 D PFAM: regulatory protein TetR; KEGG: sgl:SG2094 putative transcriptional repressor; TetR family transcriptional regulator 1521238..1521882 Serratia proteamaculans 568 5606244 YP_001477627.1 CDS Spro_1395 NC_009832.1 1521935 1522756 R PFAM: NLPA lipoprotein; KEGG: ent:Ent638_1773 NlpA lipoprotein; NLPA lipoprotein complement(1521935..1522756) Serratia proteamaculans 568 5606245 YP_001477628.1 CDS Spro_1396 NC_009832.1 1522774 1523442 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ent:Ent638_1772 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component complement(1522774..1523442) Serratia proteamaculans 568 5606255 YP_001477629.1 CDS Spro_1397 NC_009832.1 1523435 1524460 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ent:Ent638_1771 ABC transporter related; ABC transporter-like protein complement(1523435..1524460) Serratia proteamaculans 568 5606256 YP_001477630.1 CDS Spro_1398 NC_009832.1 1524710 1525153 R PFAM: GCN5-related N-acetyltransferase; KEGG: pap:PSPA7_3901 acetyltransferase, GNAT family; GCN5-like N-acetyltransferase complement(1524710..1525153) Serratia proteamaculans 568 5606257 YP_001477631.1 CDS Spro_1399 NC_009832.1 1525181 1526071 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bte:BTH_I0388 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(1525181..1526071) Serratia proteamaculans 568 5606292 YP_001477632.1 CDS Spro_1400 NC_009832.1 1526192 1527172 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bca:BCE_3496 quinone oxidoreductase; alcohol dehydrogenase 1526192..1527172 Serratia proteamaculans 568 5606293 YP_001477633.1 CDS Spro_1401 NC_009832.1 1527231 1528103 D KEGG: ppf:Pput_4568 hypothetical protein; hypothetical protein 1527231..1528103 Serratia proteamaculans 568 5606294 YP_001477634.1 CDS Spro_1402 NC_009832.1 1528268 1529371 D KEGG: ypi:YpsIP31758_2801 hypothetical protein; hypothetical protein 1528268..1529371 Serratia proteamaculans 568 5606295 YP_001477635.1 CDS Spro_1403 NC_009832.1 1529399 1529926 D PFAM: isochorismatase hydrolase; KEGG: she:Shewmr4_1847 isochorismatase hydrolase; isochorismatase hydrolase 1529399..1529926 Serratia proteamaculans 568 5606296 YP_001477636.1 CDS Spro_1404 NC_009832.1 1530023 1530769 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pae:PA1827 probable short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(1530023..1530769) Serratia proteamaculans 568 5606297 YP_001477637.1 CDS Spro_1405 NC_009832.1 1530897 1531805 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B1001 transcriptional regulator, LysR family; LysR family transcriptional regulator 1530897..1531805 Serratia proteamaculans 568 5606339 YP_001477638.1 CDS Spro_1406 NC_009832.1 1531990 1532997 D catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase II 1531990..1532997 Serratia proteamaculans 568 5606340 YP_001477639.1 CDS Spro_1407 NC_009832.1 1533023 1534381 R PFAM: major facilitator superfamily MFS_1; KEGG: ecj:JW4319 predicted transporter; major facilitator transporter complement(1533023..1534381) Serratia proteamaculans 568 5606341 YP_001477640.1 CDS Spro_1408 NC_009832.1 1534607 1535512 R PFAM: GntR domain protein; KEGG: ecj:JW5792 predicted DNA-binding transcriptional regulator; GntR family transcriptional regulator complement(1534607..1535512) Serratia proteamaculans 568 5606374 YP_001477641.1 CDS Spro_1409 NC_009832.1 1535659 1536672 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ecs:ECs5318 putative oxidoreductase; alcohol dehydrogenase 1535659..1536672 Serratia proteamaculans 568 5606375 YP_001477642.1 CDS Spro_1410 NC_009832.1 1536792 1537625 D KEGG: yen:YE2878 putative ABC transport ATP-binding subunit; TIGRFAM: phosphonate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; phosphonate ABC transporter ATPase 1536792..1537625 Serratia proteamaculans 568 5606376 YP_001477643.1 CDS Spro_1411 NC_009832.1 1537665 1538597 D TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: yen:YE2877 putative substrate-binding periplasmic transport protein; phosphonate ABC transporter periplasmic phosphonate-binding protein 1537665..1538597 Serratia proteamaculans 568 5606389 YP_001477644.1 CDS Spro_1412 NC_009832.1 1538674 1539537 D TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypi:YpsIP31758_2797 phosphonate ABC transporter, permease protein; phosphonate ABC transporter inner membrane subunit 1538674..1539537 Serratia proteamaculans 568 5606390 YP_001477645.1 CDS Spro_1413 NC_009832.1 1539534 1540433 D TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypi:YpsIP31758_2796 phosphonate ABC transporter, permease protein; phosphonate ABC transporter inner membrane subunit 1539534..1540433 Serratia proteamaculans 568 5606418 YP_001477646.1 CDS Spro_1414 NC_009832.1 1540498 1541001 D PFAM: protein of unknown function DUF1456; KEGG: yps:YPTB1227 hypothetical protein; hypothetical protein 1540498..1541001 Serratia proteamaculans 568 5606419 YP_001477647.1 CDS Spro_1415 NC_009832.1 1541308 1542948 R PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: yen:YE2573 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(1541308..1542948) Serratia proteamaculans 568 5606420 YP_001477648.1 CDS Spro_1416 NC_009832.1 1543452 1544948 R PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: kpn:KPN_04684 putative sulfate transporter; sulfate transporter complement(1543452..1544948) Serratia proteamaculans 568 5606563 YP_001477649.1 CDS Spro_1417 NC_009832.1 1544945 1545556 R PFAM: carbonic anhydrase; KEGG: kpn:KPN_04685 putative carbonic anhdrase; carbonate dehydratase complement(1544945..1545556) Serratia proteamaculans 568 5606564 YP_001477650.1 CDS Spro_1418 NC_009832.1 1546174 1548003 D catalyzes the hydrolysis of allophanate; allophanate hydrolase 1546174..1548003 Serratia proteamaculans 568 5606565 YP_001477651.1 CDS Spro_1419 NC_009832.1 1548006 1551629 D TIGRFAM: urea amidolyase related protein; Urea carboxylase; PFAM: biotin/lipoyl attachment domain-containing protein; Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; RimK domain protein ATP-grasp; KEGG: pmy:Pmen_0703 UreA amidolyase related protein; Urea carboxylase 1548006..1551629 Serratia proteamaculans 568 5606607 YP_001477652.1 CDS Spro_1420 NC_009832.1 1551681 1552391 D PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: eca:ECA2143 GntR-family transcriptional regulator; GntR family transcriptional regulator 1551681..1552391 Serratia proteamaculans 568 5606608 YP_001477653.1 CDS Spro_1421 NC_009832.1 1552436 1553704 D KEGG: ent:Ent638_1988 putative substrate-binding periplasmic transport protein; putative substrate-binding periplasmic transport protein 1552436..1553704 Serratia proteamaculans 568 5606609 YP_001477654.1 CDS Spro_1422 NC_009832.1 1553948 1555528 D PFAM: inner-membrane translocator; KEGG: yen:YE2872 putative branched-chain amino acid transport system, permease component; inner-membrane translocator 1553948..1555528 Serratia proteamaculans 568 5606674 YP_001477655.1 CDS Spro_1423 NC_009832.1 1555528 1556604 D PFAM: inner-membrane translocator; KEGG: yps:YPTB1230 ABC type branched-chain amino acid transporter, permease protein; inner-membrane translocator 1555528..1556604 Serratia proteamaculans 568 5606675 YP_001477656.1 CDS Spro_1424 NC_009832.1 1556601 1557407 D PFAM: ABC transporter related; KEGG: eca:ECA2147 putative ABC transport ATP-binding subunit; ABC transporter-like protein 1556601..1557407 Serratia proteamaculans 568 5606676 YP_001477657.1 CDS Spro_1425 NC_009832.1 1557416 1558114 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA2148 putative ABC transport ATP-binding subunit; ABC transporter-like protein 1557416..1558114 Serratia proteamaculans 568 5606683 YP_001477658.1 CDS Spro_1426 NC_009832.1 1558258 1558770 D KEGG: xau:Xaut_3206 hypothetical protein; hypothetical protein 1558258..1558770 Serratia proteamaculans 568 5606684 YP_001477659.1 CDS Spro_1427 NC_009832.1 1558822 1558956 D hypothetical protein 1558822..1558956 Serratia proteamaculans 568 5606685 YP_001477660.1 CDS Spro_1428 NC_009832.1 1558960 1559472 R PFAM: GCN5-related N-acetyltransferase; KEGG: pfl:PFL_2567 acetyltransferase, GNAT family, putative; GCN5-like N-acetyltransferase complement(1558960..1559472) Serratia proteamaculans 568 5606773 YP_001477661.1 CDS Spro_1429 NC_009832.1 1559697 1560914 R PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: nwi:Nwi_2327 hypothetical protein; hypothetical protein complement(1559697..1560914) Serratia proteamaculans 568 5606774 YP_001477662.1 CDS Spro_1430 NC_009832.1 1560987 1561556 R KEGG: rle:RL4058 hypothetical protein; hypothetical protein complement(1560987..1561556) Serratia proteamaculans 568 5606775 YP_001477663.1 CDS Spro_1431 NC_009832.1 1561662 1562531 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rle:RL4055 putative LysR family transcriptional regulator; LysR family transcriptional regulator 1561662..1562531 Serratia proteamaculans 568 5606779 YP_001477664.1 CDS Spro_1432 NC_009832.1 1562528 1563373 R PFAM: Rhodanese domain protein; KEGG: yen:YE2868 putative sulfurtransferase; rhodanese domain-containing protein complement(1562528..1563373) Serratia proteamaculans 568 5606780 YP_001477665.1 CDS Spro_1433 NC_009832.1 1563416 1565647 R KEGG: yen:YE2059 putative virulence factor; putative virulence factor complement(1563416..1565647) Serratia proteamaculans 568 5606822 YP_001477666.1 CDS Spro_1434 NC_009832.1 1565644 1568589 R PFAM: virulence protein SrfB; KEGG: yen:YE2058 putative virulence factor; virulence protein SrfB complement(1565644..1568589) Serratia proteamaculans 568 5606823 YP_001477667.1 CDS Spro_1435 NC_009832.1 1568589 1569797 R KEGG: eca:ECA2219 putative virulence effector protein; putative virulence effector protein complement(1568589..1569797) Serratia proteamaculans 568 5606824 YP_001477668.1 CDS Spro_1436 NC_009832.1 1569912 1570337 D PFAM: NUDIX hydrolase; KEGG: ssa:SSA_0239 7,8-dihydro-8-oxoguanine-triphosphatase, putative; NUDIX hydrolase 1569912..1570337 Serratia proteamaculans 568 5606881 YP_001477669.1 CDS Spro_1437 NC_009832.1 1570334 1570834 R PFAM: protein of unknown function DUF523; KEGG: eca:ECA1770 hypothetical protein; hypothetical protein complement(1570334..1570834) Serratia proteamaculans 568 5606882 YP_001477670.1 CDS Spro_1438 NC_009832.1 1570849 1571016 R hypothetical protein complement(1570849..1571016) Serratia proteamaculans 568 5606883 YP_001477671.1 CDS Spro_1439 NC_009832.1 1571013 1572035 R PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bld:BLi02818 hypothetical protein; AraC family transcriptional regulator complement(1571013..1572035) Serratia proteamaculans 568 5606925 YP_001477672.1 CDS Spro_1440 NC_009832.1 1572206 1573654 R PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: pfo:Pfl_5531 aminotransferase, class I and II; transcriptional regulator complement(1572206..1573654) Serratia proteamaculans 568 5606926 YP_001477673.1 CDS Spro_1441 NC_009832.1 1573832 1574020 D KEGG: pfo:Pfl_5530 hypothetical protein; hypothetical protein 1573832..1574020 Serratia proteamaculans 568 5606927 YP_001477674.1 CDS Spro_1442 NC_009832.1 1574263 1575393 D PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: yen:YE2867 hypothetical protein; oxidoreductase domain-containing protein 1574263..1575393 Serratia proteamaculans 568 5607006 YP_001477675.1 CDS Spro_1443 NC_009832.1 1575528 1577009 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_C0113 major facilitator superfamily (MFS) transporter; major facilitator transporter complement(1575528..1577009) Serratia proteamaculans 568 5607007 YP_001477676.1 CDS Spro_1444 NC_009832.1 1577484 1578551 D PFAM: fatty acid desaturase; KEGG: yen:YE2866 putative fatty acid desaturase; fatty acid desaturase 1577484..1578551 Serratia proteamaculans 568 5607008 YP_001477677.1 CDS Spro_1445 NC_009832.1 1578581 1579513 D PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: yen:YE2865 putative substrate-binding transport protein; glycine betaine ABC transporter substrate-binding protein 1578581..1579513 Serratia proteamaculans 568 5607009 YP_001477678.1 CDS Spro_1446 NC_009832.1 1579560 1580720 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypi:YpsIP31758_2785 quaternary amine uptake ABC transporter (QAT) family, permease protein; binding-protein-dependent transport systems inner membrane component 1579560..1580720 Serratia proteamaculans 568 5607010 YP_001477679.1 CDS Spro_1447 NC_009832.1 1580717 1581652 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: yps:YPTB1238 ABC type choline/glycine/betaine transporter, ATP-binding subunit; ABC transporter-like protein 1580717..1581652 Serratia proteamaculans 568 5607011 YP_001477680.1 CDS Spro_1448 NC_009832.1 1581649 1582431 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypi:YpsIP31758_2783 quaternary amine uptake ABC transporter (QAT) family, permease protein; binding-protein-dependent transport systems inner membrane component 1581649..1582431 Serratia proteamaculans 568 5607124 YP_001477681.1 CDS Spro_1449 NC_009832.1 1582441 1583220 D KEGG: yen:YE2861 hypothetical protein; hypothetical protein 1582441..1583220 Serratia proteamaculans 568 5607125 YP_001477682.1 CDS Spro_1450 NC_009832.1 1583272 1583448 R KEGG: plu:plu1523 hypothetical protein; hypothetical protein complement(1583272..1583448) Serratia proteamaculans 568 5607126 YP_001477683.1 CDS Spro_1451 NC_009832.1 1583551 1584474 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: ypi:YpsIP31758_2779 integral membrane protein; hypothetical protein complement(1583551..1584474) Serratia proteamaculans 568 5607150 YP_001477684.1 CDS Spro_1452 NC_009832.1 1584643 1585296 R KEGG: yen:YE4157 hypothetical protein; putative transcriptional regulator complement(1584643..1585296) Serratia proteamaculans 568 5607151 YP_001477685.1 CDS Spro_1453 NC_009832.1 1585401 1586855 D PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE4158 putative transport protein; major facilitator transporter 1585401..1586855 Serratia proteamaculans 568 5607192 YP_001477686.1 CDS Spro_1454 NC_009832.1 1586966 1587535 D PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: sco:SCO6802 DNA-binding protein; XRE family transcriptional regulator 1586966..1587535 Serratia proteamaculans 568 5607193 YP_001477687.1 CDS Spro_1455 NC_009832.1 1587538 1588056 D PFAM: GCN5-related N-acetyltransferase; KEGG: cvi:CV_3493 probable acetyltransferase protein; GCN5-like N-acetyltransferase 1587538..1588056 Serratia proteamaculans 568 5607194 YP_001477688.1 CDS Spro_1456 NC_009832.1 1588133 1588963 R TIGRFAM: 5'-nucleotidase, lipoprotein e(P4) family; PFAM: acid phosphatase (Class B); KEGG: oan:Oant_2497 5'-nucleotidase, lipoprotein E(P4) family; 5'-nucleotidase complement(1588133..1588963) Serratia proteamaculans 568 5607216 YP_001477689.1 CDS Spro_1457 NC_009832.1 1588985 1589836 R PFAM: GCN5-related N-acetyltransferase; KEGG: kpn:KPN_04800 putative N-acetyltransferase; GCN5-like N-acetyltransferase complement(1588985..1589836) Serratia proteamaculans 568 5607217 YP_001477690.1 CDS Spro_1458 NC_009832.1 1590028 1591125 R PFAM: porin Gram-negative type; KEGG: yen:YE2856 outer membrane protein C2; porin complement(1590028..1591125) Serratia proteamaculans 568 5607218 YP_001477691.1 CDS Spro_1459 NC_009832.1 1591521 1591838 D PFAM: Carboxymuconolactone decarboxylase; KEGG: rfr:Rfer_2441 carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase 1591521..1591838 Serratia proteamaculans 568 5607242 YP_001477692.1 CDS Spro_1460 NC_009832.1 1591843 1592277 D KEGG: cvi:CV_3287 probable tautomerase; putative tautomerase 1591843..1592277 Serratia proteamaculans 568 5607243 YP_001477693.1 CDS dinG NC_009832.1 1592292 1594490 D helicase involved in DNA repair and perhaps also replication; ATP-dependent DNA helicase DinG 1592292..1594490 Serratia proteamaculans 568 5607244 YP_001477694.1 CDS Spro_1462 NC_009832.1 1594491 1594925 R PFAM: regulatory protein AsnC/Lrp family; KEGG: kpn:KPN_02209 putative regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system; AsnC family transcriptional regulator complement(1594491..1594925) Serratia proteamaculans 568 5607249 YP_001477695.1 CDS Spro_1463 NC_009832.1 1595062 1595976 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: ret:RHE_CH00327 putative transporter permease protein; hypothetical protein 1595062..1595976 Serratia proteamaculans 568 5607250 YP_001477696.1 CDS Spro_1464 NC_009832.1 1596024 1596929 R SMART: helix-turn-helix domain protein; KEGG: rpa:RPA1926 possible transcriptional regulator, XRE family; helix-turn-helix domain-containing protein complement(1596024..1596929) Serratia proteamaculans 568 5607251 YP_001477697.1 CDS Spro_1465 NC_009832.1 1596961 1598382 D PFAM: major facilitator superfamily MFS_1; KEGG: rpa:RPA1925 putative transmembrane protein; major facilitator transporter 1596961..1598382 Serratia proteamaculans 568 5607280 YP_001477698.1 CDS Spro_1466 NC_009832.1 1598446 1599078 D PFAM: Negative transcriptional regulator; KEGG: mlo:mll0013 transcriptional regulator; FMN-binding negative transcriptional regulator 1598446..1599078 Serratia proteamaculans 568 5607281 YP_001477699.1 CDS Spro_1467 NC_009832.1 1599118 1600077 D PFAM: glycosyl transferase family 3; KEGG: ypp:YPDSF_1932 glycosyl transferase; glycosyl transferase family protein 1599118..1600077 Serratia proteamaculans 568 5607282 YP_001477700.1 CDS Spro_1468 NC_009832.1 1600127 1601983 D PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: yen:YE2852 putative peptidase; peptidase M3A and M3B thimet/oligopeptidase F 1600127..1601983 Serratia proteamaculans 568 5607304 YP_001477701.1 CDS Spro_1469 NC_009832.1 1602047 1602685 R KEGG: son:SO0492 hypothetical flavoprotein oxygenase; flavoprotein oxygenase complement(1602047..1602685) Serratia proteamaculans 568 5607305 YP_001477702.1 CDS Spro_1470 NC_009832.1 1602761 1603771 D PFAM: protein of unknown function DUF890; KEGG: yen:YE2849 hypothetical protein; putative SAM-dependent methyltransferase 1602761..1603771 Serratia proteamaculans 568 5607306 YP_001477703.1 CDS Spro_1471 NC_009832.1 1603992 1607000 D KEGG: jan:Jann_4218 allergen V5/TPX-1 related; hypothetical protein 1603992..1607000 Serratia proteamaculans 568 5607334 YP_001477704.1 CDS Spro_1472 NC_009832.1 1607323 1608627 D KEGG: ypp:YPDSF_1927 chemotactic transducer; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; Pas/Pac sensor-containing methyl-accepting chemotaxis sensory transducer 1607323..1608627 Serratia proteamaculans 568 5607335 YP_001477705.1 CDS Spro_1473 NC_009832.1 1608816 1609379 D PFAM: regulatory protein TetR; KEGG: aha:AHA_0553 transcriptional regulator, TetR family; TetR family transcriptional regulator 1608816..1609379 Serratia proteamaculans 568 5607357 YP_001477706.1 CDS Spro_1474 NC_009832.1 1609391 1610020 D PFAM: GCN5-related N-acetyltransferase; KEGG: cbh:CLC_0910 acetyltransferase, GNAT family; GCN5-like N-acetyltransferase 1609391..1610020 Serratia proteamaculans 568 5607358 YP_001477707.1 CDS Spro_1475 NC_009832.1 1610017 1611024 D KEGG: lwe:lwe1084 hydrolase family protein; hydrolase family protein 1610017..1611024 Serratia proteamaculans 568 5607359 YP_001477708.1 CDS Spro_1476 NC_009832.1 1611031 1613244 R PFAM: MscS Mechanosensitive ion channel; KEGG: sec:SC0822 paral putative transport protein; hypothetical protein complement(1611031..1613244) Serratia proteamaculans 568 5607360 YP_001477709.1 CDS glnQ NC_009832.1 1613399 1614121 R similar to ATP-binding component of ABC transporters; glutamine ABC transporter ATP-binding protein complement(1613399..1614121) Serratia proteamaculans 568 5607361 YP_001477710.1 CDS glnP NC_009832.1 1614118 1614777 R similar to permease component of ABC transporters; mutations impair ability of Escherichia coli to transport and utilize glutamine; glutamine ABC transporter permease complement(1614118..1614777) Serratia proteamaculans 568 5607362 YP_001477711.1 CDS glnH NC_009832.1 1614883 1615626 R similar to periplasmic-binding component of ABC transporters; glutamine ABC transporter periplasmic protein complement(1614883..1615626) Serratia proteamaculans 568 5607366 YP_001477712.1 CDS Spro_1480 NC_009832.1 1615974 1616240 R PFAM: zinc finger DksA/TraR C4-type; KEGG: yen:YE2844 DksA/TraR C4-type zinc finger protein; hypothetical protein complement(1615974..1616240) Serratia proteamaculans 568 5607367 YP_001477713.1 CDS Spro_1481 NC_009832.1 1616400 1616903 R binds DNA in a non-sequence-specific manner and is abundant during stationary phase; forms a DNA-protein crystal that protects DNA from damage; required for normal starvation response and long-term stationary viability; forms a homododecameric complex and sequesters iron which provides protection against oxidative damage; DNA starvation/stationary phase protection protein Dps complement(1616400..1616903) Serratia proteamaculans 568 5607368 YP_001477714.1 CDS Spro_1482 NC_009832.1 1617264 1617773 R PFAM: conserved hypothetical protein; KEGG: ypi:YpsIP31758_1296 hypothetical protein; hypothetical protein complement(1617264..1617773) Serratia proteamaculans 568 5607401 YP_001477715.1 CDS Spro_1483 NC_009832.1 1617877 1618764 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: ypi:YpsIP31758_1500 integral membrane protein; threonine and homoserine efflux system complement(1617877..1618764) Serratia proteamaculans 568 5607402 YP_001477716.1 CDS ompX NC_009832.1 1619163 1619681 D OmpX; involved in cell adhesion; forms an eight-stranded antiparallel beta-barrel that protrudes from the cell surface; mutations in the gene increase cell-surface contact in fimbriated strains but decrease contact in nonfimbriated strains; outer membrane protein X 1619163..1619681 Serratia proteamaculans 568 5607403 YP_001477717.1 CDS Spro_1485 NC_009832.1 1619786 1620769 R PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: ent:Ent638_1888 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(1619786..1620769) Serratia proteamaculans 568 5607424 YP_001477718.1 CDS Spro_1486 NC_009832.1 1620863 1621738 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: yen:YE2048 LysR-family transcriptional regulatory protein; LysR family transcriptional regulator 1620863..1621738 Serratia proteamaculans 568 5607425 YP_001477719.1 CDS Spro_1487 NC_009832.1 1621748 1622278 R PFAM: GCN5-related N-acetyltransferase; KEGG: bxe:Bxe_B0244 putative acetyltransferase, GnaT family; GCN5-like N-acetyltransferase complement(1621748..1622278) Serratia proteamaculans 568 5607426 YP_001477720.1 CDS Spro_1488 NC_009832.1 1622332 1623702 R member of the Gnt family of gluconate transporters; not involved in gluconate transport; unknown function; inner membrane permease YgbN complement(1622332..1623702) Serratia proteamaculans 568 5603220 YP_001477721.1 CDS Spro_1489 NC_009832.1 1623809 1624585 R PFAM: Xylose isomerase domain protein TIM barrel; KEGG: eca:ECA4330 putative isomerase; hydroxypyruvate isomerase complement(1623809..1624585) Serratia proteamaculans 568 5603221 YP_001477722.1 CDS Spro_1490 NC_009832.1 1624589 1625221 R PFAM: class II aldolase/adducin family protein; KEGG: yen:YE2502 putative class II aldolase-family protein; putative aldolase complement(1624589..1625221) Serratia proteamaculans 568 5603222 YP_001477723.1 CDS Spro_1491 NC_009832.1 1625218 1626480 R PFAM: type III effector Hrp-dependent outers; KEGG: eca:ECA4328 hypothetical protein; Hrp-dependent type III effector protein complement(1625218..1626480) Serratia proteamaculans 568 5606965 YP_001477724.1 CDS Spro_1492 NC_009832.1 1626480 1627394 R PFAM: 6-phosphogluconate dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: eca:ECA4327 putative oxidoreductase; 2-hydroxy-3-oxopropionate reductase complement(1626480..1627394) Serratia proteamaculans 568 5606966 YP_001477725.1 CDS Spro_1493 NC_009832.1 1627676 1628440 D PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: eca:ECA4325 DeoR-family trancriptional regulator; DeoR family transcriptional regulator 1627676..1628440 Serratia proteamaculans 568 5603617 YP_001477726.1 CDS Spro_1494 NC_009832.1 1628656 1629141 R hypothetical protein complement(1628656..1629141) Serratia proteamaculans 568 5603618 YP_001477727.1 CDS Spro_1495 NC_009832.1 1629266 1630033 R PFAM: oxidoreductase molybdopterin binding; KEGG: psb:Psyr_3371 oxidoreductase, molybdopterin binding; molybdopterin-binding oxidoreductase complement(1629266..1630033) Serratia proteamaculans 568 5603619 YP_001477728.1 CDS Spro_1496 NC_009832.1 1630026 1630631 R KEGG: psp:PSPPH_3292 HupC/HyaC/HydC family protein; HupC/HyaC/HydC family protein complement(1630026..1630631) Serratia proteamaculans 568 5603434 YP_001477729.1 CDS Spro_1497 NC_009832.1 1630646 1631272 R KEGG: pau:PA14_64560 hypothetical protein; hypothetical protein complement(1630646..1631272) Serratia proteamaculans 568 5603435 YP_001477730.1 CDS Spro_1498 NC_009832.1 1631413 1632084 D TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pae:PA4885 two-component response regulator; two component heavy metal response transcriptional regulator 1631413..1632084 Serratia proteamaculans 568 5603436 YP_001477731.1 CDS Spro_1499 NC_009832.1 1632081 1633505 D TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: psb:Psyr_3375 heavy metal sensor kinase; heavy metal sensor signal transduction histidine kinase 1632081..1633505 Serratia proteamaculans 568 5604124 YP_001477732.1 CDS Spro_1500 NC_009832.1 1634050 1634889 D PFAM: transcriptional regulator domain protein; KEGG: ecp:ECP_4609 hypothetical protein; transcriptional regulator CadC 1634050..1634889 Serratia proteamaculans 568 5604125 YP_001477733.1 CDS Spro_1501 NC_009832.1 1635048 1635677 D PFAM: regulatory protein LuxR; KEGG: reh:H16_B1626 response regulator, NarL-family; two component LuxR family transcriptional regulator 1635048..1635677 Serratia proteamaculans 568 5604126 YP_001477734.1 CDS Spro_1502 NC_009832.1 1636113 1636700 D KEGG: ecs:ECs0323 hypothetical protein; hypothetical protein 1636113..1636700 Serratia proteamaculans 568 5605403 YP_001477735.1 CDS Spro_1503 NC_009832.1 1636781 1637449 D KEGG: kpn:KPN_00292 hypothetical protein; hypothetical protein 1636781..1637449 Serratia proteamaculans 568 5605404 YP_001477736.1 CDS Spro_1504 NC_009832.1 1637504 1640026 D KEGG: kpn:KPN_00293 putative enzyme; hypothetical protein 1637504..1640026 Serratia proteamaculans 568 5605405 YP_001477737.1 CDS Spro_1505 NC_009832.1 1640016 1641650 D KEGG: kpn:KPN_00294 putative receptor; putative receptor 1640016..1641650 Serratia proteamaculans 568 5602701 YP_001477738.1 CDS Spro_1506 NC_009832.1 1641660 1642322 D KEGG: kpn:KPN_00295 hypothetical protein; hypothetical protein 1641660..1642322 Serratia proteamaculans 568 5602702 YP_001477739.1 CDS Spro_1507 NC_009832.1 1642319 1643785 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pol:Bpro_0544 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(1642319..1643785) Serratia proteamaculans 568 5602703 YP_001477740.1 CDS Spro_1508 NC_009832.1 1643789 1644502 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bur:Bcep18194_C6809 two component transcriptional regulator, winged helix family; two component transcriptional regulator complement(1643789..1644502) Serratia proteamaculans 568 5607442 YP_001477741.1 CDS Spro_1509 NC_009832.1 1644650 1645261 D KEGG: mms:mma_3541 thiosulfate reductase cytochrome b subunit (membrane anchoring protein); thiosulfate reductase cytochrome subunit B (membrane anchoring protein) 1644650..1645261 Serratia proteamaculans 568 5607443 YP_001477742.1 CDS Spro_1510 NC_009832.1 1645272 1646060 D PFAM: oxidoreductase molybdopterin binding; KEGG: pol:Bpro_2730 oxidoreductase, molybdopterin binding; molybdopterin-binding oxidoreductase 1645272..1646060 Serratia proteamaculans 568 5607444 YP_001477743.1 CDS Spro_1511 NC_009832.1 1646101 1646424 D TIGRFAM: Pentapeptide MXKDX repeat protein; KEGG: pol:Bpro_0540 hypothetical protein; pentapeptide MXKDX repeat-containing protein 1646101..1646424 Serratia proteamaculans 568 5602801 YP_001477744.1 CDS Spro_1512 NC_009832.1 1646501 1648540 R proton-motive-force-driven choline transporter; choline transport protein BetT complement(1646501..1648540) Serratia proteamaculans 568 5602802 YP_001477745.1 CDS Spro_1513 NC_009832.1 1648953 1649549 D HTH-type; bet1; Repressor involved in choline regulation of the bet genes; transcriptional regulator BetI 1648953..1649549 Serratia proteamaculans 568 5603623 YP_001477746.1 CDS Spro_1514 NC_009832.1 1649570 1651042 D catalyzes the formation of betaine from betaine aldehyde; betaine aldehyde dehydrogenase 1649570..1651042 Serratia proteamaculans 568 5603624 YP_001477747.1 CDS Spro_1515 NC_009832.1 1651113 1652780 D catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine; choline dehydrogenase 1651113..1652780 Serratia proteamaculans 568 5603625 YP_001477748.1 CDS Spro_1516 NC_009832.1 1652875 1654497 R PFAM: ferredoxin-dependent glutamate synthase; KEGG: pap:PSPA7_1539 hypothetical protein; ferredoxin-dependent glutamate synthase complement(1652875..1654497) Serratia proteamaculans 568 5607439 YP_001477749.1 CDS Spro_1517 NC_009832.1 1654677 1655267 R LuxR family transcriptional regulator complement(1654677..1655267) Serratia proteamaculans 568 5607440 YP_001477750.1 CDS Spro_1518 NC_009832.1 1655290 1656006 R PFAM: EAL domain protein; KEGG: kpn:KPN_03274 hypothetical protein; diguanylate phosphodiesterase complement(1655290..1656006) Serratia proteamaculans 568 5607441 YP_001477751.1 CDS Spro_1519 NC_009832.1 1656522 1657049 D PFAM: Fimbrial protein; KEGG: bpd:BURPS668_2033 fimbrial protein; fimbrial protein 1656522..1657049 Serratia proteamaculans 568 5606539 YP_001477752.1 CDS Spro_1520 NC_009832.1 1657121 1657804 D PFAM: pili assembly chaperone; KEGG: kpn:KPN_02985 probable pilin chaperone; pili assembly chaperone 1657121..1657804 Serratia proteamaculans 568 5606540 YP_001477753.1 CDS Spro_1521 NC_009832.1 1657833 1660448 D PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: kpn:KPN_02986 outer membrane protein; export and assembly of type 1 fimbriae; fimbrial biogenesis outer membrane usher protein 1657833..1660448 Serratia proteamaculans 568 5606541 YP_001477754.1 CDS Spro_1522 NC_009832.1 1660460 1661503 D KEGG: pae:PA0498 hypothetical protein; hypothetical protein 1660460..1661503 Serratia proteamaculans 568 5603157 YP_001477755.1 CDS Spro_1523 NC_009832.1 1661567 1662025 R PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: sgl:SG0402 right origin-binding protein; AraC family transcriptional regulator complement(1661567..1662025) Serratia proteamaculans 568 5603158 YP_001477756.1 CDS Spro_1524 NC_009832.1 1662227 1663804 R malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate; malate:quinone oxidoreductase complement(1662227..1663804) Serratia proteamaculans 568 5603159 YP_001477757.1 CDS Spro_1525 NC_009832.1 1664238 1665077 R PFAM: NmrA family protein; KEGG: stp:Strop_2997 NmrA family protein; NmrA family protein complement(1664238..1665077) Serratia proteamaculans 568 5603620 YP_001477758.1 CDS Spro_1526 NC_009832.1 1665171 1665797 D PFAM: regulatory protein TetR; KEGG: oan:Oant_1673 transcriptional regulator, TetR family; TetR family transcriptional regulator 1665171..1665797 Serratia proteamaculans 568 5603621 YP_001477759.1 CDS Spro_1527 NC_009832.1 1665794 1666408 R PFAM: GCN5-related N-acetyltransferase; KEGG: atc:AGR_L_237 hypothetical protein; GCN5-like N-acetyltransferase complement(1665794..1666408) Serratia proteamaculans 568 5603622 YP_001477760.1 CDS Spro_1528 NC_009832.1 1666545 1667972 R PFAM: Alkaline phosphatase; KEGG: yen:YE2068 alkaline phosphatase precursor; alkaline phosphatase complement(1666545..1667972) Serratia proteamaculans 568 5605380 YP_001477761.1 CDS Spro_1529 NC_009832.1 1668110 1668817 R PFAM: Glutathione S-transferase domain; KEGG: mlo:mlr4954 glutathione S-transferase; glutathione S-transferase domain-containing protein complement(1668110..1668817) Serratia proteamaculans 568 5605381 YP_001477762.1 CDS Spro_1530 NC_009832.1 1668996 1669343 D PFAM: Antibiotic biosynthesis monooxygenase; KEGG: mlo:mll4602 hypothetical protein; antibiotic biosynthesis monooxygenase 1668996..1669343 Serratia proteamaculans 568 5605382 YP_001477763.1 CDS Spro_1531 NC_009832.1 1669517 1670008 D KEGG: pfl:PFL_3428 hypothetical protein; hypothetical protein 1669517..1670008 Serratia proteamaculans 568 5603169 YP_001477764.1 CDS Spro_1532 NC_009832.1 1670202 1670459 R KEGG: hch:HCH_03746 hypothetical protein; hypothetical protein complement(1670202..1670459) Serratia proteamaculans 568 5603170 YP_001477765.1 CDS Spro_1533 NC_009832.1 1670696 1671166 R catalyzes the reaction of cyanate and bicarbonate to produce ammonia and carbon dioxide; cyanate hydratase complement(1670696..1671166) Serratia proteamaculans 568 5603171 YP_001477766.1 CDS Spro_1534 NC_009832.1 1671188 1671841 R PFAM: carbonic anhydrase; KEGG: bam:Bamb_5945 carbonate dehydratase; carbonate dehydratase complement(1671188..1671841) Serratia proteamaculans 568 5602564 YP_001477767.1 CDS Spro_1535 NC_009832.1 1671956 1672858 D controls the expression of the cynTSX operon involved in degrading and using cyanate as a sole nitrogen source; DNA-binding transcriptional regulator CynR 1671956..1672858 Serratia proteamaculans 568 5602565 YP_001477768.1 CDS Spro_1536 NC_009832.1 1673012 1673299 D hypothetical protein 1673012..1673299 Serratia proteamaculans 568 5602566 YP_001477769.1 CDS Spro_1537 NC_009832.1 1673655 1674443 D hypothetical protein 1673655..1674443 Serratia proteamaculans 568 5604292 YP_001477770.1 CDS Spro_1538 NC_009832.1 1674572 1675450 D hypothetical protein 1674572..1675450 Serratia proteamaculans 568 5604293 YP_001477771.1 CDS Spro_1539 NC_009832.1 1675591 1675905 R KEGG: mes:Meso_3017 hypothetical protein; hypothetical protein complement(1675591..1675905) Serratia proteamaculans 568 5604294 YP_001477772.1 CDS Spro_1540 NC_009832.1 1676244 1678580 D SMART: AAA ATPase; KEGG: ret:RHE_PE00189 hypothetical protein; AAA ATPase 1676244..1678580 Serratia proteamaculans 568 5602756 YP_001477773.1 CDS Spro_1541 NC_009832.1 1678649 1678960 R PFAM: helix-turn-helix domain protein; KEGG: plu:plu4475 hypothetical protein; XRE family transcriptional regulator complement(1678649..1678960) Serratia proteamaculans 568 5602757 YP_001477774.1 CDS Spro_1542 NC_009832.1 1679940 1680479 D hypothetical protein 1679940..1680479 Serratia proteamaculans 568 5603410 YP_001477775.1 CDS Spro_1543 NC_009832.1 1680967 1681608 R PFAM: Resolvase domain; KEGG: gox:GOX2728 truncated transposon gamma-delta resolvase; resolvase domain-containing protein complement(1680967..1681608) Serratia proteamaculans 568 5603411 YP_001477776.1 CDS Spro_1544 NC_009832.1 1681671 1683182 R PFAM: Resolvase domain; Recombinase; KEGG: mms:mma_3169 site-specific recombinase; resolvase domain-containing protein complement(1681671..1683182) Serratia proteamaculans 568 5603412 YP_001477777.1 CDS Spro_1545 NC_009832.1 1683245 1684813 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA3010 ABC transporter ATP-binding protein; ABC transporter-like protein 1683245..1684813 Serratia proteamaculans 568 5603178 YP_001477778.1 CDS Spro_1546 NC_009832.1 1684870 1685625 R ATP-dependent adenylate transferase, transfers adenyl moiety to the MoeD subunit of molybdopterin synthase; molybdopterin biosynthesis protein MoeB complement(1684870..1685625) Serratia proteamaculans 568 5603179 YP_001477779.1 CDS Spro_1547 NC_009832.1 1685628 1686866 R is involved in the formation of active molybdenum cofactor and the chelation of molybdenum; molybdopterin biosynthesis protein MoeA complement(1685628..1686866) Serratia proteamaculans 568 5603180 YP_001477780.1 CDS Spro_1548 NC_009832.1 1686961 1687497 D PFAM: protein of unknown function DUF924; KEGG: yen:YE2827 hypothetical protein; hypothetical protein 1686961..1687497 Serratia proteamaculans 568 5604915 YP_001477781.1 CDS Spro_1549 NC_009832.1 1687842 1688789 D PFAM: peptidase T2 asparaginase 2; KEGG: eca:ECA0132 L-asparaginase; peptidase T2 asparaginase 2 1687842..1688789 Serratia proteamaculans 568 5604916 YP_001477782.1 CDS Spro_1550 NC_009832.1 1688874 1690751 D PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: eca:ECA2835 putative ABC transporter ATP-binding protein; ABC transporter-like protein 1688874..1690751 Serratia proteamaculans 568 5604917 YP_001477783.1 CDS Spro_1551 NC_009832.1 1690775 1692313 D PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA2834 putative ABC transporter periplasmic binding protein; extracellular solute-binding protein 1690775..1692313 Serratia proteamaculans 568 5602585 YP_001477784.1 CDS Spro_1552 NC_009832.1 1692364 1693284 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA2833 putative ABC transporter permease protein; binding-protein-dependent transport systems inner membrane component 1692364..1693284 Serratia proteamaculans 568 5602586 YP_001477785.1 CDS Spro_1553 NC_009832.1 1693294 1694202 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ent:Ent638_1326 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 1693294..1694202 Serratia proteamaculans 568 5602587 YP_001477786.1 CDS Spro_1554 NC_009832.1 1694800 1695036 D PFAM: Post-segregation antitoxin CcdA; KEGG: yen:YE3481 gyrase inhibitor antitoxin; post-segregation antitoxin CcdA 1694800..1695036 Serratia proteamaculans 568 5602626 YP_001477787.1 CDS Spro_1555 NC_009832.1 1695039 1695353 D PFAM: CcdB protein; KEGG: yen:YE3480 cytotoxic protein; CcdB protein 1695039..1695353 Serratia proteamaculans 568 5602627 YP_001477788.1 CDS Spro_1556 NC_009832.1 1695390 1696232 R KEGG: yen:YE2822 putative esterase; TIGRFAM: S-formylglutathione hydrolase; PFAM: putative esterase; S-formylglutathione hydrolase complement(1695390..1696232) Serratia proteamaculans 568 5602628 YP_001477789.1 CDS Spro_1557 NC_009832.1 1696247 1697374 R TIGRFAM: Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: yen:YE2821 probable alcohol dehydrogenase; S-(hydroxymethyl)glutathione dehydrogenase complement(1696247..1697374) Serratia proteamaculans 568 5602686 YP_001477790.1 CDS Spro_1558 NC_009832.1 1697401 1698318 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: yen:YE2820 putative LysR-family transcriptional regulatory protein; LysR family transcriptional regulator complement(1697401..1698318) Serratia proteamaculans 568 5602687 YP_001477791.1 CDS Spro_1559 NC_009832.1 1698425 1699582 D PFAM: protein of unknown function DUF1228; major facilitator superfamily MFS_1; KEGG: yen:YE2819 hypothetical protein; hypothetical protein 1698425..1699582 Serratia proteamaculans 568 5602688 YP_001477792.1 CDS folE NC_009832.1 1699830 1700495 D involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 1699830..1700495 Serratia proteamaculans 568 5602739 YP_001477793.1 CDS Spro_1561 NC_009832.1 1700566 1701747 D PFAM: protein of unknown function DUF405; protein of unknown function DUF418; KEGG: yen:YE2817 hypothetical protein; hypothetical protein 1700566..1701747 Serratia proteamaculans 568 5602740 YP_001477794.1 CDS Spro_1562 NC_009832.1 1701877 1702914 D negative regulator of the mglBAC operon for galactose utilization; DNA-binding transcriptional regulator GalS 1701877..1702914 Serratia proteamaculans 568 5602741 YP_001477795.1 CDS Spro_1563 NC_009832.1 1703171 1704163 D PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: yen:YE2815 galactose-binding protein; periplasmic binding protein/LacI transcriptional regulator 1703171..1704163 Serratia proteamaculans 568 5602748 YP_001477796.1 CDS Spro_1564 NC_009832.1 1704329 1705837 D with MglBC transports galactose or methyl galactoside into the cell; contains 2 ATP binding domains; galactose/methyl galaxtoside transporter ATP-binding protein 1704329..1705837 Serratia proteamaculans 568 5602749 YP_001477797.1 CDS mglC NC_009832.1 1705849 1706859 D ABC transporter; functions in galactose transport; part of MglA2C2B transporter complex; beta-methylgalactoside transporter inner membrane component 1705849..1706859 Serratia proteamaculans 568 5602750 YP_001477798.1 CDS Spro_1566 NC_009832.1 1707105 1707848 R PFAM: protein of unknown function DUF218; KEGG: yen:YE2795 hypothetical protein; hypothetical protein complement(1707105..1707848) Serratia proteamaculans 568 5602865 YP_001477799.1 CDS Spro_1567 NC_009832.1 1708018 1709715 R malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate; malate dehydrogenase complement(1708018..1709715) Serratia proteamaculans 568 5602866 YP_001477800.1 CDS Spro_1568 NC_009832.1 1709937 1710821 R Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis; cytidine deaminase complement(1709937..1710821) Serratia proteamaculans 568 5602890 YP_001477801.1 CDS Spro_1569 NC_009832.1 1710959 1711654 R PFAM: LrgB family protein; KEGG: yen:YE2791 hypothetical protein; hypothetical protein complement(1710959..1711654) Serratia proteamaculans 568 5602891 YP_001477802.1 CDS Spro_1570 NC_009832.1 1711651 1712058 R PFAM: LrgA family protein; KEGG: yen:YE2790 hypothetical protein; hypothetical protein complement(1711651..1712058) Serratia proteamaculans 568 5602892 YP_001477803.1 CDS Spro_1571 NC_009832.1 1712195 1713418 R PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE2789 putative multidrug resistance protein; major facilitator transporter complement(1712195..1713418) Serratia proteamaculans 568 5602896 YP_001477804.1 CDS Spro_1572 NC_009832.1 1713663 1714148 D PFAM: protein of unknown function DUF559; KEGG: pla:Plav_1553 protein of unknown function DUF559; hypothetical protein 1713663..1714148 Serratia proteamaculans 568 5602897 YP_001477805.1 CDS metG NC_009832.1 1714154 1716181 R methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase complement(1714154..1716181) Serratia proteamaculans 568 5602898 YP_001477806.1 CDS Spro_1574 NC_009832.1 1716341 1717453 D KEGG: yen:YE2784 hypothetical protein; putative ATPase 1716341..1717453 Serratia proteamaculans 568 5602920 YP_001477807.1 CDS Spro_1575 NC_009832.1 1717505 1718134 R PFAM: phosphoesterase PA-phosphatase related; KEGG: sgl:SG0972 hypothetical protein; PA-phosphatase-like phosphoesterase complement(1717505..1718134) Serratia proteamaculans 568 5602921 YP_001477808.1 CDS Spro_1576 NC_009832.1 1718381 1719022 D functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor; uridine kinase 1718381..1719022 Serratia proteamaculans 568 5602922 YP_001477809.1 CDS dcd NC_009832.1 1719149 1719730 D Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase 1719149..1719730 Serratia proteamaculans 568 5602947 YP_001477810.1 CDS Spro_1578 NC_009832.1 1719775 1721610 D YegA; inner membrane protein involved in the assembly of outer membrane proteins (OMPs); asmA-null mutants show low lipopolysaccharide (LPS) levels, suggesting a role in LPS biogenesis and/or in restricting outer membrane fluidity, resulting on altered assembly of OMPs; putative assembly protein 1719775..1721610 Serratia proteamaculans 568 5602948 YP_001477811.1 CDS dcuC NC_009832.1 1721807 1723165 D responsible for the transport of C4-dicarboxylates during anaerobic growth; C4-dicarboxylate transporter DcuC 1721807..1723165 Serratia proteamaculans 568 5602949 YP_001477812.1 CDS Spro_1580 NC_009832.1 1723194 1724780 R PFAM: CBS domain containing protein; transporter-associated region; Integral membrane protein TerC; KEGG: yen:YE2779 hypothetical protein; integral membrane protein TerC complement(1723194..1724780) Serratia proteamaculans 568 5603035 YP_001477813.1 CDS Spro_1581 NC_009832.1 1725426 1726340 D TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: yen:YE2778 UTP-glucose-1-phosphate uridylyltransferase; UTP-glucose-1-phosphate uridylyltransferase 1725426..1726340 Serratia proteamaculans 568 5603036 YP_001477814.1 CDS Spro_1582 NC_009832.1 1726386 1727279 D TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: yen:YE2777 UTP-glucose-1-phosphate uridylyltransferase; UTP-glucose-1-phosphate uridylyltransferase 1726386..1727279 Serratia proteamaculans 568 5603037 YP_001477815.1 CDS Spro_1583 NC_009832.1 1727572 1728708 D PFAM: polysaccharide export protein; KEGG: eca:ECA1417 putative polysaccharide export protein; polysaccharide export protein 1727572..1728708 Serratia proteamaculans 568 5603123 YP_001477816.1 CDS Spro_1584 NC_009832.1 1728718 1729152 D PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: kpn:KPN_02511 protein tyrosine phosphatase; protein tyrosine phosphatase 1728718..1729152 Serratia proteamaculans 568 5603124 YP_001477817.1 CDS Spro_1585 NC_009832.1 1729172 1731346 D PFAM: lipopolysaccharide biosynthesis protein; KEGG: kpn:KPN_02510 tyrosine autokinase; non-specific protein-tyrosine kinase 1729172..1731346 Serratia proteamaculans 568 5603125 YP_001477818.1 CDS Spro_1586 NC_009832.1 1731502 1732785 D hypothetical protein 1731502..1732785 Serratia proteamaculans 568 5603136 YP_001477819.1 CDS Spro_1587 NC_009832.1 1733326 1734093 D PFAM: glycosyl transferase group 1; KEGG: mba:Mbar_A0239 mannosyltransferase; group 1 glycosyl transferase 1733326..1734093 Serratia proteamaculans 568 5603137 YP_001477820.1 CDS Spro_1588 NC_009832.1 1734174 1735298 D PFAM: glycosyl transferase group 1; KEGG: cac:CAC3057 glycosyltransferase; group 1 glycosyl transferase 1734174..1735298 Serratia proteamaculans 568 5603138 YP_001477821.1 CDS Spro_1589 NC_009832.1 1735359 1736432 D hypothetical protein 1735359..1736432 Serratia proteamaculans 568 5603541 YP_001477822.1 CDS Spro_1590 NC_009832.1 1736456 1737613 D PFAM: glycosyl transferase group 1; KEGG: bfr:BF3922 probable mannosyltransferase; group 1 glycosyl transferase 1736456..1737613 Serratia proteamaculans 568 5603542 YP_001477823.1 CDS Spro_1591 NC_009832.1 1737697 1739136 D PFAM: polysaccharide biosynthesis protein; KEGG: fjo:Fjoh_2240 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 1737697..1739136 Serratia proteamaculans 568 5603543 YP_001477824.1 CDS Spro_1592 NC_009832.1 1739197 1740237 D PFAM: glycosyl transferase group 1; KEGG: bha:BH3663 lipopolysaccharide biosynthesis; group 1 glycosyl transferase 1739197..1740237 Serratia proteamaculans 568 5603564 YP_001477825.1 CDS Spro_1593 NC_009832.1 1740308 1741288 D KEGG: pst:PSPTO_5546 hypothetical protein; hypothetical protein 1740308..1741288 Serratia proteamaculans 568 5603565 YP_001477826.1 CDS Spro_1594 NC_009832.1 1741492 1742886 D WcaJ; glucose-1-phosphate transferase responsible for the addition of the first glucose-1-phosphate from UDP-glucose to the lipid carrier undecaprenyl phosphate in the biosynthesis of colanic acid; putative UDP-glucose lipid carrier transferase 1741492..1742886 Serratia proteamaculans 568 5603678 YP_001477827.1 CDS Spro_1595 NC_009832.1 1743356 1745944 D KEGG: ava:Ava_4160 VCBS; hypothetical protein 1743356..1745944 Serratia proteamaculans 568 5603679 YP_001477828.1 CDS Spro_1596 NC_009832.1 1746330 1748096 D KEGG: plu:plu0657 ATP-binding protein PrtB; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; type I secretion system ATPase 1746330..1748096 Serratia proteamaculans 568 5603680 YP_001477829.1 CDS Spro_1597 NC_009832.1 1748151 1749482 D TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: plu:plu0658 membrane fusion protein PrtC; HlyD family type I secretion membrane fusion protein 1748151..1749482 Serratia proteamaculans 568 5603741 YP_001477830.1 CDS Spro_1598 NC_009832.1 1749485 1750864 D TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: plu:plu0659 outer membrane protein PrtD; TolC family type I secretion outer membrane protein 1749485..1750864 Serratia proteamaculans 568 5603742 YP_001477831.1 CDS Spro_1599 NC_009832.1 1751171 1752595 D KEGG: eca:ECA1438 mannose-1-phosphate guanylyltransferase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 1751171..1752595 Serratia proteamaculans 568 5603743 YP_001477832.1 CDS Spro_1600 NC_009832.1 1752611 1753978 D PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: ent:Ent638_2662 phosphomannomutase; phosphomannomutase 1752611..1753978 Serratia proteamaculans 568 5603749 YP_001477833.1 CDS Spro_1601 NC_009832.1 1754195 1755208 D TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KR domain protein; KEGG: plu:plu4831 UDP-glucose 4-epimerase (galactowaldenase) (UDP-galactose 4-epimerase); UDP-glucose 4-epimerase 1754195..1755208 Serratia proteamaculans 568 5603750 YP_001477834.1 CDS Spro_1602 NC_009832.1 1755708 1756745 D TIGRFAM: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase; PFAM: glycosyl transferase family 4; KEGG: eca:ECA1416 undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 1755708..1756745 Serratia proteamaculans 568 5603751 YP_001477835.1 CDS Spro_1603 NC_009832.1 1756838 1757986 R PFAM: glycosyl transferase group 1; KEGG: sdy:SDY_PA04 RfpB; group 1 glycosyl transferase complement(1756838..1757986) Serratia proteamaculans 568 5603755 YP_001477836.1 CDS Spro_1604 NC_009832.1 1758001 1759089 R PFAM: glycosyl transferase group 1; KEGG: asa:ASA_1456 glycosyltransferase; group 1 glycosyl transferase complement(1758001..1759089) Serratia proteamaculans 568 5603756 YP_001477837.1 CDS Spro_1605 NC_009832.1 1759098 1759742 R hypothetical protein complement(1759098..1759742) Serratia proteamaculans 568 5603757 YP_001477838.1 CDS Spro_1606 NC_009832.1 1760070 1761308 R PFAM: polysaccharide biosynthesis protein; KEGG: vfi:VF0170 flippase; polysaccharide biosynthesis protein complement(1760070..1761308) Serratia proteamaculans 568 5603778 YP_001477839.1 CDS Spro_1607 NC_009832.1 1761289 1762383 R hypothetical protein complement(1761289..1762383) Serratia proteamaculans 568 5603779 YP_001477840.1 CDS Spro_1608 NC_009832.1 1762868 1764274 D catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase 1762868..1764274 Serratia proteamaculans 568 5603780 YP_001477841.1 CDS Spro_1609 NC_009832.1 1764347 1764961 R catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein complement(1764347..1764961) Serratia proteamaculans 568 5603802 YP_001477842.1 CDS Spro_1610 NC_009832.1 1764955 1765731 R catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF complement(1764955..1765731) Serratia proteamaculans 568 5603803 YP_001477843.1 CDS Spro_1611 NC_009832.1 1765713 1766450 R catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase complement(1765713..1766450) Serratia proteamaculans 568 5603804 YP_001477844.1 CDS hisH NC_009832.1 1766456 1767046 R with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH complement(1766456..1767046) Serratia proteamaculans 568 5603824 YP_001477845.1 CDS Spro_1613 NC_009832.1 1767046 1768113 R catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate; imidazole glycerol-phosphate dehydratase/histidinol phosphatase complement(1767046..1768113) Serratia proteamaculans 568 5603825 YP_001477846.1 CDS Spro_1614 NC_009832.1 1768110 1769198 R catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase complement(1768110..1769198) Serratia proteamaculans 568 5603826 YP_001477847.1 CDS hisD NC_009832.1 1769195 1770502 R catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase complement(1769195..1770502) Serratia proteamaculans 568 5603833 YP_001477848.1 CDS hisG NC_009832.1 1770507 1771406 R long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; ATP phosphoribosyltransferase complement(1770507..1771406) Serratia proteamaculans 568 5603834 YP_001477849.1 CDS Spro_1617 NC_009832.1 1771856 1772680 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: yen:YE2764 hypothetical protein; NAD-dependent epimerase/dehydratase 1771856..1772680 Serratia proteamaculans 568 5603835 YP_001477850.1 CDS Spro_1618 NC_009832.1 1772736 1773653 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pae:PA1145 probable transcriptional regulator; LysR family transcriptional regulator complement(1772736..1773653) Serratia proteamaculans 568 5603845 YP_001477851.1 CDS Spro_1619 NC_009832.1 1773902 1774834 D TIGRFAM: putative agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: bmn:BMA10247_A0674 agmatinase; putative agmatinase 1773902..1774834 Serratia proteamaculans 568 5603846 YP_001477852.1 CDS Spro_1620 NC_009832.1 1774906 1776288 D PFAM: Na+/solute symporter; KEGG: pae:PA1418 probable sodium:solute symport protein; Na+/solute symporter 1774906..1776288 Serratia proteamaculans 568 5603862 YP_001477853.1 CDS Spro_1621 NC_009832.1 1776329 1777309 R PFAM: Mg2 transporter protein CorA family protein; KEGG: reh:H16_A0087 putative Mg2+ and Co2+ transporter; Mg2 transporter protein CorA family protein complement(1776329..1777309) Serratia proteamaculans 568 5603863 YP_001477854.1 CDS Spro_1622 NC_009832.1 1777321 1777740 R PFAM: GCN5-related N-acetyltransferase; KEGG: hch:HCH_01386 histone acetyltransferase HPA2/related acetyltransferase; GCN5-like N-acetyltransferase complement(1777321..1777740) Serratia proteamaculans 568 5603864 YP_001477855.1 CDS Spro_1623 NC_009832.1 1777923 1778543 R PFAM: Glutathione S-transferase domain; KEGG: pfl:PFL_1771 glutathione S-transferase; glutathione S-transferase domain-containing protein complement(1777923..1778543) Serratia proteamaculans 568 5603883 YP_001477856.1 CDS Spro_1624 NC_009832.1 1778648 1779304 R TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; KEGG: yen:YE1464 putative hydrolase; HAD family hydrolase complement(1778648..1779304) Serratia proteamaculans 568 5603884 YP_001477857.1 CDS Spro_1625 NC_009832.1 1779598 1780617 D PFAM: 2OG-Fe(II) oxygenase; KEGG: yen:YE1465 putative iron/ascorbate oxidoreductase family protein; 2OG-Fe(II) oxygenase 1779598..1780617 Serratia proteamaculans 568 5603885 YP_001477858.1 CDS Spro_1626 NC_009832.1 1780703 1781848 R PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: yen:YE1469 putative cystathionine gamma-synthase; cystathionine gamma-synthase complement(1780703..1781848) Serratia proteamaculans 568 5603933 YP_001477859.1 CDS Spro_1627 NC_009832.1 1781862 1783229 R PFAM: CBS domain containing protein; Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: yen:YE1470 cystathionine beta-lyase; pyridoxal-5'-phosphate-dependent protein subunit beta complement(1781862..1783229) Serratia proteamaculans 568 5603934 YP_001477860.1 CDS Spro_1628 NC_009832.1 1783695 1784900 D PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: yen:YE1471 D-alanyl-D-alanine carboxypeptidase; Serine-type D-Ala-D-Ala carboxypeptidase 1783695..1784900 Serratia proteamaculans 568 5603935 YP_001477861.1 CDS Spro_1629 NC_009832.1 1784964 1786331 R KEGG: yen:YE1472 L-serine dehydratase 2; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; L-serine dehydratase 1 complement(1784964..1786331) Serratia proteamaculans 568 5603986 YP_001477862.1 CDS Spro_1630 NC_009832.1 1786423 1787718 R TIGRFAM: serine transporter; PFAM: aromatic amino acid permease; KEGG: yen:YE1473 serine transporter; serine transporter complement(1786423..1787718) Serratia proteamaculans 568 5603987 YP_001477863.1 CDS Spro_1631 NC_009832.1 1788688 1789530 R PFAM: regulatory protein DeoR; KEGG: yen:YE1474 deoxyribose operon repressor; DNA-binding transcriptional repressor DeoR complement(1788688..1789530) Serratia proteamaculans 568 5603988 YP_001477864.1 CDS Spro_1632 NC_009832.1 1789598 1790278 R catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase complement(1789598..1790278) Serratia proteamaculans 568 5603995 YP_001477865.1 CDS Spro_1633 NC_009832.1 1790494 1791336 D KEGG: yen:YE2065 hypothetical protein; hypothetical protein 1790494..1791336 Serratia proteamaculans 568 5603996 YP_001477866.1 CDS Spro_1634 NC_009832.1 1791373 1791978 R PFAM: phosphoesterase PA-phosphatase related; KEGG: yen:YE1476 putative permease; undecaprenyl pyrophosphate phosphatase complement(1791373..1791978) Serratia proteamaculans 568 5603997 YP_001477867.1 CDS Spro_1635 NC_009832.1 1791984 1792736 R KEGG: yen:YE1477 hypothetical protein; hypothetical protein complement(1791984..1792736) Serratia proteamaculans 568 5603998 YP_001477868.1 CDS Spro_1636 NC_009832.1 1792873 1793712 D PFAM: purine or other phosphorylase family 1; KEGG: btl:BALH_2989 putative 5-methylthioadenosine nucleosidase/S-adenosylhomocysteine nucleosidase; purine phosphorylase family 1 1792873..1793712 Serratia proteamaculans 568 5603999 YP_001477869.1 CDS Spro_1637 NC_009832.1 1793854 1794366 D serine protease inhibitor, inhibits trypsin and other proteases; ecotin 1793854..1794366 Serratia proteamaculans 568 5604000 YP_001477870.1 CDS Spro_1638 NC_009832.1 1794609 1795577 D PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: pfl:PFL_3440 serine/threonine dehydratase family protein; pyridoxal-5'-phosphate-dependent protein subunit beta 1794609..1795577 Serratia proteamaculans 568 5604015 YP_001477871.1 CDS Spro_1639 NC_009832.1 1795781 1797469 R TIGRFAM: YidE/YbjL duplication; PFAM: TrkA-C domain protein; YidE/YbjL duplication domain protein; KEGG: yen:YE1478 TrkA, potassium channel-family protein; hypothetical protein complement(1795781..1797469) Serratia proteamaculans 568 5604016 YP_001477872.1 CDS Spro_1640 NC_009832.1 1797785 1798165 D KEGG: eca:ECA2682 hypothetical protein; hypothetical protein 1797785..1798165 Serratia proteamaculans 568 5604017 YP_001477873.1 CDS grxA NC_009832.1 1798217 1798480 R functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase; also involved in reducing some disulfides in a coupled system with glutathione reductase; glutaredoxin 1 complement(1798217..1798480) Serratia proteamaculans 568 5604047 YP_001477874.1 CDS Spro_1642 NC_009832.1 1798677 1799027 D YbjC; located in the same operon as the nfsA gene; member of the soxRS regulon which mediates in part the increased levels of superoxide in response to oxidative stress; induced by paraquat; regulated by SoxS; unknown function; hypothetical protein 1798677..1799027 Serratia proteamaculans 568 5604048 YP_001477875.1 CDS Spro_1643 NC_009832.1 1799085 1799987 D TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: protein of unknown function DUF201; RimK domain protein ATP-grasp; KEGG: stm:STM0875 ribosomal protein S6 modification protein; alpha-L-glutamate ligase 1799085..1799987 Serratia proteamaculans 568 5604049 YP_001477876.1 CDS Spro_1644 NC_009832.1 1800149 1800628 D KEGG: ypi:YpsIP31758_2646 hypothetical protein; hypothetical protein 1800149..1800628 Serratia proteamaculans 568 5604062 YP_001477877.1 CDS Spro_1645 NC_009832.1 1801037 1802146 D PFAM: extracellular solute-binding protein family 1; KEGG: ypi:YpsIP31758_2645 putrescine ABC transporter, periplasmic putrescine binding protein; putrescine ABC transporter periplasmic-binding protein 1801037..1802146 Serratia proteamaculans 568 5604063 YP_001477878.1 CDS potG NC_009832.1 1802282 1803415 D part of the PotFGHI ATP-dependent putrescine transporter; putrescine transporter ATP-binding subunit 1802282..1803415 Serratia proteamaculans 568 5604082 YP_001477879.1 CDS Spro_1647 NC_009832.1 1803441 1804406 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yen:YE1486 putrescine transport system permease protein; putrescine ABC transporter membrane protein 1803441..1804406 Serratia proteamaculans 568 5604083 YP_001477880.1 CDS Spro_1648 NC_009832.1 1804403 1805248 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypi:YpsIP31758_2642 putrescine ABC transporter, permease protein; putrescine ABC transporter membrane protein 1804403..1805248 Serratia proteamaculans 568 5604084 YP_001477881.1 CDS Spro_1649 NC_009832.1 1805481 1805924 D KEGG: eca:ECA2673 hypothetical protein; hypothetical protein 1805481..1805924 Serratia proteamaculans 568 5604091 YP_001477882.1 CDS rumB NC_009832.1 1805993 1807120 D RNA uridine methyltransferase B; catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA; 23S rRNA methyluridine methyltransferase 1805993..1807120 Serratia proteamaculans 568 5604092 YP_001477883.1 CDS Spro_1651 NC_009832.1 1807124 1807375 R KEGG: psb:Psyr_3832 prevent-host-death protein; prevent-host-death protein complement(1807124..1807375) Serratia proteamaculans 568 5604093 YP_001477884.1 CDS Spro_1652 NC_009832.1 1807485 1808219 R KEGG: ypi:YpsIP31758_2639 arginine ABC transporter, periplasmic substrate-binding protein ArtJ; TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; cationic amino acid ABC transporter periplasmic binding protein complement(1807485..1808219) Serratia proteamaculans 568 5604094 YP_001477885.1 CDS artM NC_009832.1 1808428 1809096 R with ArtPQJI acts to transport arginine across the inner membrane; arginine transporter permease ArtM complement(1808428..1809096) Serratia proteamaculans 568 5604095 YP_001477886.1 CDS Spro_1654 NC_009832.1 1809096 1809836 R with ArtPMJI transports arginine across the inner membrane; arginine transporter permease ArtQ complement(1809096..1809836) Serratia proteamaculans 568 5604096 YP_001477887.1 CDS Spro_1655 NC_009832.1 1809821 1810552 R KEGG: yen:YE1495 arginine-binding periplasmic protein 1 precursor; TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; cationic amino acid ABC transporter periplasmic binding protein complement(1809821..1810552) Serratia proteamaculans 568 5604097 YP_001477888.1 CDS artP NC_009832.1 1810586 1811314 R With ArtMQJI transports arginine across the inner membrane; arginine transporter ATP-binding subunit complement(1810586..1811314) Serratia proteamaculans 568 5604098 YP_001477889.1 CDS Spro_1657 NC_009832.1 1811576 1812124 R induced during stationary phase and by acivicin (a glutamine analog); regulated by Lrp and RpoS; putative lipoprotein complement(1811576..1812124) Serratia proteamaculans 568 5604099 YP_001477890.1 CDS Spro_1658 NC_009832.1 1812285 1812608 D PFAM: protein of unknown function DUF74; KEGG: eca:ECA2666 hypothetical protein; hypothetical protein 1812285..1812608 Serratia proteamaculans 568 5604106 YP_001477891.1 CDS Spro_1659 NC_009832.1 1812755 1813591 D PFAM: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: eca:ECA2665 putative N-acetylmuramoyl-L-alanine amidase; N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD 1812755..1813591 Serratia proteamaculans 568 5604107 YP_001477892.1 CDS Spro_1660 NC_009832.1 1813592 1814602 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: yen:YE1503 hypothetical protein; NAD-dependent epimerase/dehydratase complement(1813592..1814602) Serratia proteamaculans 568 5604108 YP_001477893.1 CDS Spro_1661 NC_009832.1 1814771 1816210 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: ypi:YpsIP31758_2621 NAD dependent epimerase/dehydratase family protein; NAD-dependent epimerase/dehydratase complement(1814771..1816210) Serratia proteamaculans 568 5604115 YP_001477894.1 CDS Spro_1662 NC_009832.1 1816364 1816711 D PFAM: protein of unknown function DUF1294; KEGG: stm:STM1632 putative inner membrane protein; hypothetical protein 1816364..1816711 Serratia proteamaculans 568 5604116 YP_001477895.1 CDS Spro_1663 NC_009832.1 1816748 1817764 R low- specificity; catalyzes the formation of acetaldehyde and glycine from L-threonine; acts on L-threonine, L-allo-threonine, L-threo-phenylserine, and L-erythro-phenylserine; L-threonine aldolase complement(1816748..1817764) Serratia proteamaculans 568 5604117 YP_001477896.1 CDS Spro_1664 NC_009832.1 1817861 1819582 R catalyzes the formation of acetate from pyruvate; pyruvate dehydrogenase complement(1817861..1819582) Serratia proteamaculans 568 5604133 YP_001477897.1 CDS Spro_1665 NC_009832.1 1819788 1820792 R PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: eca:ECA2663 NADH oxidoreductase; HCP oxidoreductase complement(1819788..1820792) Serratia proteamaculans 568 5604134 YP_001477898.1 CDS Spro_1666 NC_009832.1 1820847 1822544 R catalyzes the reduction of hydroxylamine to ammonia and water; hydroxylamine reductase complement(1820847..1822544) Serratia proteamaculans 568 5604135 YP_001477899.1 CDS Spro_1667 NC_009832.1 1822668 1823564 R PFAM: protein of unknown function DUF340 membrane; KEGG: yen:YE1511 hypothetical protein; hypothetical protein complement(1822668..1823564) Serratia proteamaculans 568 5604139 YP_001477900.1 CDS Spro_1668 NC_009832.1 1823757 1825421 D KEGG: ypi:YpsIP31758_2614 hypothetical protein; hypothetical protein 1823757..1825421 Serratia proteamaculans 568 5604140 YP_001477901.1 CDS Spro_1669 NC_009832.1 1825418 1826386 R PFAM: protein of unknown function DUF535; KEGG: yen:YE1513 putative virulence factor; hypothetical protein complement(1825418..1826386) Serratia proteamaculans 568 5604141 YP_001477902.1 CDS Spro_1670 NC_009832.1 1826647 1827693 D confers macrolide resistance via active drug efflux; macrolide transporter subunit MacA 1826647..1827693 Serratia proteamaculans 568 5604172 YP_001477903.1 CDS Spro_1671 NC_009832.1 1827693 1829639 D with MacA is involved in the export of macrolide; macrolide transporter ATP-binding /permease 1827693..1829639 Serratia proteamaculans 568 5604173 YP_001477904.1 CDS Spro_1672 NC_009832.1 1829717 1829938 R KEGG: stm:STM0943 similar to CspA but not cold shock induced; TIGRFAM: cold shock domain protein CspD; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein complement(1829717..1829938) Serratia proteamaculans 568 5604174 YP_001477905.1 CDS clpS NC_009832.1 1830298 1830618 D involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA; ATP-dependent Clp protease adaptor protein ClpS 1830298..1830618 Serratia proteamaculans 568 5604175 YP_001477906.1 CDS clpA NC_009832.1 1830646 1832925 D ATPase and specificity subunit of the ClpA-ClpP ATP dependent serine protease; directs protease to specific substrates; ATP-dependent Clp protease ATP-binding subunit 1830646..1832925 Serratia proteamaculans 568 5604176 YP_001477907.1 CDS infA NC_009832.1 1833138 1833356 R stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 complement(1833138..1833356) Serratia proteamaculans 568 5604191 YP_001477908.1 CDS aat NC_009832.1 1833463 1834188 R leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase complement(1833463..1834188) Serratia proteamaculans 568 5604192 YP_001477909.1 CDS Spro_1677 NC_009832.1 1834219 1835955 R in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; cysteine/glutathione ABC transporter membrane/ATP-binding protein complement(1834219..1835955) Serratia proteamaculans 568 5604193 YP_001477910.1 CDS Spro_1678 NC_009832.1 1835958 1837724 R in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; cysteine/glutathione ABC transporter membrane/ATP-binding protein complement(1835958..1837724) Serratia proteamaculans 568 5604197 YP_001477911.1 CDS Spro_1679 NC_009832.1 1837901 1838518 R PFAM: Glutathione S-transferase domain; KEGG: pfo:Pfl_2442 glutathione S-transferase-like; glutathione S-transferase domain-containing protein complement(1837901..1838518) Serratia proteamaculans 568 5604198 YP_001477912.1 CDS Spro_1680 NC_009832.1 1838615 1839496 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfl:PFL_4591 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(1838615..1839496) Serratia proteamaculans 568 5604199 YP_001477913.1 CDS Spro_1681 NC_009832.1 1839573 1840544 R TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: yen:YE1523 thioredoxin reductase; thioredoxin reductase complement(1839573..1840544) Serratia proteamaculans 568 5604200 YP_001477914.1 CDS Spro_1682 NC_009832.1 1841211 1841705 D mediates a global response to leucine; acts as a regulator for several genes involved in the high-affinity branched-chain amino acid transport system; leucine-responsive transcriptional regulator 1841211..1841705 Serratia proteamaculans 568 5604201 YP_001477915.1 CDS Spro_1683 NC_009832.1 1841826 1845389 D PFAM: cell divisionFtsK/SpoIIIE; KEGG: yen:YE1525 putative cell division protein; cell division protein FtsK/SpoIIIE 1841826..1845389 Serratia proteamaculans 568 5604202 YP_001477916.1 CDS lolA NC_009832.1 1845588 1846199 D participates with LolB in the incorporation of lipoprotein into the outer membrane; outer-membrane lipoprotein carrier protein 1845588..1846199 Serratia proteamaculans 568 5604211 YP_001477917.1 CDS Spro_1685 NC_009832.1 1846207 1847550 D PFAM: magnesium chelatase ChlI subunit; AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: yen:YE1527 putative ATPase protein; recombination factor protein RarA 1846207..1847550 Serratia proteamaculans 568 5604212 YP_001477918.1 CDS Spro_1686 NC_009832.1 1847661 1848953 D catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 1847661..1848953 Serratia proteamaculans 568 5604213 YP_001477919.1 CDS Spro_1687 NC_009832.1 1849224 1851677 D TIGRFAM: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: kpn:KPN_01580 putative dimethyl sulfoxide reductase, major subunit; anaerobic dimethyl sulfoxide reductase subunit A 1849224..1851677 Serratia proteamaculans 568 5604234 YP_001477920.1 CDS Spro_1688 NC_009832.1 1851688 1852305 D TIGRFAM: Dimethylsulfoxide reductase chain B; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: kpn:KPN_00927 anaerobic dimethyl sulfoxide (DMSO) reductase, subunit B; dimethylsulfoxide reductase subunit B 1851688..1852305 Serratia proteamaculans 568 5604235 YP_001477921.1 CDS Spro_1689 NC_009832.1 1852307 1853167 D PFAM: DMSO reductase anchor subunit (DmsC); KEGG: ypp:YPDSF_3037 anaerobic dimethyl sulfoxide reductase chain C; DMSO reductase anchor subunit DmsC 1852307..1853167 Serratia proteamaculans 568 5604236 YP_001477922.1 CDS Spro_1690 NC_009832.1 1853217 1853834 D binds to the twin-arginine signal peptides of certain proteins, including dimethylsulfoxide reductase and trimethylamine N-oxide reductase that are translocated to the cytoplasmic membrane; twin-argninine leader-binding protein DmsD 1853217..1853834 Serratia proteamaculans 568 5604237 YP_001477923.1 CDS Spro_1691 NC_009832.1 1854132 1854590 D KEGG: plu:plu2183 hypothetical protein; hypothetical protein 1854132..1854590 Serratia proteamaculans 568 5604238 YP_001477924.1 CDS Spro_1692 NC_009832.1 1854602 1855045 D KEGG: plu:plu2184 hypothetical protein; hypothetical protein 1854602..1855045 Serratia proteamaculans 568 5604239 YP_001477925.1 CDS Spro_1693 NC_009832.1 1855035 1856216 D KEGG: plu:plu2185 hypothetical protein; hypothetical protein 1855035..1856216 Serratia proteamaculans 568 5604246 YP_001477926.1 CDS Spro_1694 NC_009832.1 1856229 1856645 D PFAM: NUDIX hydrolase; KEGG: ppr:PBPRB0736 hypothetical protein; NUDIX hydrolase 1856229..1856645 Serratia proteamaculans 568 5604247 YP_001477927.1 CDS Spro_1695 NC_009832.1 1856773 1857423 D PFAM: phosphoribosyltransferase; KEGG: plu:plu2180 hypothetical protein; phosphoribosyltransferase 1856773..1857423 Serratia proteamaculans 568 5604248 YP_001477928.1 CDS Spro_1696 NC_009832.1 1857457 1857672 D KEGG: plu:plu2181 hypothetical protein; hypothetical protein 1857457..1857672 Serratia proteamaculans 568 5604249 YP_001477929.1 CDS Spro_1697 NC_009832.1 1857693 1858388 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: plu:plu2182 hypothetical protein; HAD family hydrolase 1857693..1858388 Serratia proteamaculans 568 5604250 YP_001477930.1 CDS Spro_1698 NC_009832.1 1858771 1862607 D TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; Thioesterase; phosphopantetheine-binding; KEGG: plu:plu2186 hypothetical protein; amino acid adenylation domain-containing protein 1858771..1862607 Serratia proteamaculans 568 5604286 YP_001477931.1 CDS Spro_1699 NC_009832.1 1862604 1863530 D PFAM: Indigoidine synthase A family protein; KEGG: plu:plu2187 hypothetical protein; indigoidine synthase A family protein 1862604..1863530 Serratia proteamaculans 568 5604287 YP_001477932.1 CDS Spro_1700 NC_009832.1 1863745 1864890 D PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE1530 hypothetical protein; putative MFS family transporter protein 1863745..1864890 Serratia proteamaculans 568 5604288 YP_001477933.1 CDS pflA NC_009832.1 1864941 1865681 R activates pyruvate formate-lyase 1 under anaerobic conditions; pyruvate formate lyase-activating enzyme 1 complement(1864941..1865681) Serratia proteamaculans 568 5604295 YP_001477934.1 CDS Spro_1702 NC_009832.1 1865982 1868264 R KEGG: yen:YE1532 formate acetyltransferase 1; TIGRFAM: formate acetyltransferase; PFAM: formate C-acetyltransferase glycine radical; pyruvate formate-lyase PFL; formate acetyltransferase complement(1865982..1868264) Serratia proteamaculans 568 5604296 YP_001477935.1 CDS Spro_1703 NC_009832.1 1868319 1869179 R PFAM: formate/nitrite transporter; KEGG: yen:YE1533 putative formate transporter 1; formate transporter complement(1868319..1869179) Serratia proteamaculans 568 5604297 YP_001477936.1 CDS Spro_1704 NC_009832.1 1869642 1871405 R PFAM: protein of unknown function DUF181; KEGG: ypi:YpsIP31758_2587 hypothetical protein; hypothetical protein complement(1869642..1871405) Serratia proteamaculans 568 5604396 YP_001477937.1 CDS ansB NC_009832.1 1871554 1872600 D catalyzes the formation of aspartate from asparagine, periplasmic; regulated by cyclic AMP receptor protein (CRP) and also induced by anaerobiosis; L-asparaginase II 1871554..1872600 Serratia proteamaculans 568 5604397 YP_001477938.1 CDS Spro_1706 NC_009832.1 1872883 1873968 D catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase 1872883..1873968 Serratia proteamaculans 568 5604398 YP_001477939.1 CDS Spro_1707 NC_009832.1 1874084 1875370 D catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 1874084..1875370 Serratia proteamaculans 568 5604413 YP_001477940.1 CDS cmk NC_009832.1 1875647 1876336 D Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase 1875647..1876336 Serratia proteamaculans 568 5604414 YP_001477941.1 CDS rpsA NC_009832.1 1876518 1878197 D in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 1876518..1878197 Serratia proteamaculans 568 5604415 YP_001477942.1 CDS ihfB NC_009832.1 1878260 1878544 D This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit beta 1878260..1878544 Serratia proteamaculans 568 5604416 YP_001477943.1 CDS Spro_1711 NC_009832.1 1878876 1881089 D TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; PFAM: beta-lactamase domain protein; ComEC/Rec2-related protein; KEGG: yen:YE1542 hypothetical protein; hypothetical protein 1878876..1881089 Serratia proteamaculans 568 5604417 YP_001477944.1 CDS Spro_1712 NC_009832.1 1881125 1882873 D involved in the transport of lipid A across the inner membrane; lipid transporter ATP-binding/permease 1881125..1882873 Serratia proteamaculans 568 5604418 YP_001477945.1 CDS lpxK NC_009832.1 1882873 1883853 D transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase 1882873..1883853 Serratia proteamaculans 568 5604430 YP_001477946.1 CDS Spro_1714 NC_009832.1 1883855 1885261 R PFAM: protein of unknown function DUF1338; KEGG: pen:PSEEN5405 hypothetical protein; hypothetical protein complement(1883855..1885261) Serratia proteamaculans 568 5604431 YP_001477947.1 CDS Spro_1715 NC_009832.1 1885787 1885996 D PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: yen:YE1546 putative cold shock protein CspE2; cold-shock DNA-binding domain-containing protein 1885787..1885996 Serratia proteamaculans 568 5604432 YP_001477948.1 CDS Spro_1716 NC_009832.1 1886218 1886439 D PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: ypi:YpsIP31758_2574 cold shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein 1886218..1886439 Serratia proteamaculans 568 5604466 YP_001477949.1 CDS Spro_1717 NC_009832.1 1886550 1887776 D PFAM: protein of unknown function DUF1006; KEGG: cvi:CV_0245 hypothetical protein; hypothetical protein 1886550..1887776 Serratia proteamaculans 568 5604467 YP_001477950.1 CDS Spro_1718 NC_009832.1 1888065 1888247 D PFAM: protein of unknown function DUF343; KEGG: ypi:YpsIP31758_2572 hypothetical protein; hypothetical protein 1888065..1888247 Serratia proteamaculans 568 5604468 YP_001477951.1 CDS Spro_1719 NC_009832.1 1888244 1888993 D CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 1888244..1888993 Serratia proteamaculans 568 5604487 YP_001477952.1 CDS Spro_1720 NC_009832.1 1889142 1890038 D KEGG: yen:YE1551 hypothetical protein; hypothetical protein 1889142..1890038 Serratia proteamaculans 568 5604488 YP_001477953.1 CDS Spro_1721 NC_009832.1 1890045 1890818 R PFAM: protein of unknown function DUF218; KEGG: yen:YE1552 putative inner membrane protein; hypothetical protein complement(1890045..1890818) Serratia proteamaculans 568 5604489 YP_001477954.1 CDS Spro_1722 NC_009832.1 1890970 1891755 D involved in cellular zinc and cadmium homeostasis by binding excess metal ions to its cysteine sulfurs and histidine nitrogens; expression of smtA in cyanobacteria is repressed by SmtB at low concentrations of zinc; NO elicits release of Zn ions from SmtA; putative metallothionein SmtA 1890970..1891755 Serratia proteamaculans 568 5604490 YP_001477955.1 CDS Spro_1723 NC_009832.1 1891752 1893074 D acts with MukB and MukE to condense the chromosome and allow for segregation during cell division; condesin subunit F 1891752..1893074 Serratia proteamaculans 568 5604491 YP_001477956.1 CDS Spro_1724 NC_009832.1 1893055 1893783 D acts with MukB and MukF to condense the chromosome and allow for segregation during cell division; condesin subunit E 1893055..1893783 Serratia proteamaculans 568 5604501 YP_001477957.1 CDS mukB NC_009832.1 1893780 1898228 D SMC (structural maintenance of chromosomes) family of proteins; involved in chromosome condensatin and partitioning; forms a homodimer and the C-terminal is essential for DNA-binding activity while the purified N-terminal domain binds FtsZ; mutations result in cell division defects; cell division protein MukB 1893780..1898228 Serratia proteamaculans 568 5604502 YP_001477958.1 CDS Spro_1726 NC_009832.1 1898453 1900294 D PFAM: Peptidoglycan-binding domain 1 protein; KEGG: yen:YE1557 hypothetical protein; hypothetical protein 1898453..1900294 Serratia proteamaculans 568 5604503 YP_001477959.1 CDS Spro_1727 NC_009832.1 1900476 1901024 D PFAM: protein of unknown function DUF882; Peptidase M15A; KEGG: yen:YE1558 hypothetical protein; hypothetical protein 1900476..1901024 Serratia proteamaculans 568 5604507 YP_001477960.1 CDS Spro_1728 NC_009832.1 1901091 1901738 D PFAM: beta-lactamase domain protein; KEGG: ypi:YpsIP31758_2561 metallo-beta-lactamase family protein; beta-lactamase domain-containing protein 1901091..1901738 Serratia proteamaculans 568 5604508 YP_001477961.1 CDS Spro_1729 NC_009832.1 1901807 1903012 R catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase complement(1901807..1903012) Serratia proteamaculans 568 5604509 YP_001477962.1 CDS Spro_1730 NC_009832.1 1903242 1904351 R PFAM: porin Gram-negative type; KEGG: stm:STM1473 outer membrane protein N precursor; porin complement(1903242..1904351) Serratia proteamaculans 568 5604584 YP_001477963.1 CDS asnC NC_009832.1 1904655 1906055 R catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase complement(1904655..1906055) Serratia proteamaculans 568 5604585 YP_001477964.1 CDS Spro_1732 NC_009832.1 1906280 1907485 R catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase complement(1906280..1907485) Serratia proteamaculans 568 5604586 YP_001477965.1 CDS Spro_1733 NC_009832.1 1907740 1909446 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sun:SUN_1205 signal transduction response regulator; diguanylate cyclase complement(1907740..1909446) Serratia proteamaculans 568 5604625 YP_001477966.1 CDS pepN NC_009832.1 1909895 1912510 D TIGRFAM: aminopeptidase N; PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: yps:YPTB1438 putative aminopeptidase N; aminopeptidase N 1909895..1912510 Serratia proteamaculans 568 5604626 YP_001477967.1 CDS ssuB NC_009832.1 1912542 1913315 R part of the ABC type transport system SsuABC for aliphatic sulfonates; with SsuA being the periplasmic substrate-binding subunit, SsuB the ATP-binding subunit and SsuC the permease; aliphatic sulfonates transport ATP-binding subunit complement(1912542..1913315) Serratia proteamaculans 568 5604627 YP_001477968.1 CDS Spro_1736 NC_009832.1 1913312 1914106 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypi:YpsIP31758_0355 putative ABC aliphatic sulfonates transporter, permease subunit; binding-protein-dependent transport systems inner membrane component complement(1913312..1914106) Serratia proteamaculans 568 5604711 YP_001477969.1 CDS Spro_1737 NC_009832.1 1914118 1915266 R catalyzes the release of sulfite from alkanesulfonates; alkanesulfonate monooxygenase complement(1914118..1915266) Serratia proteamaculans 568 5604712 YP_001477970.1 CDS Spro_1738 NC_009832.1 1915283 1916248 R part of the ABC type transport system SsuABC for aliphatic sulfonates; with SsuA being the periplasmic subunit SsuB the ATP-binding subunit and SsuC the permease; alkanesulfonate transporter substrate-binding subunit complement(1915283..1916248) Serratia proteamaculans 568 5604713 YP_001477971.1 CDS Spro_1739 NC_009832.1 1916274 1916789 R PFAM: NADPH-dependent FMN reductase; KEGG: ypi:YpsIP31758_0352 NADPH-dependent FMN reductase; NAD(P)H-dependent FMN reductase complement(1916274..1916789) Serratia proteamaculans 568 5604738 YP_001477972.1 CDS Spro_1740 NC_009832.1 1917112 1918122 D catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 1917112..1918122 Serratia proteamaculans 568 5604739 YP_001477973.1 CDS Spro_1741 NC_009832.1 1918298 1918846 D PFAM: protein of unknown function DUF1379; KEGG: yen:YE1569 hypothetical protein; hypothetical protein 1918298..1918846 Serratia proteamaculans 568 5604740 YP_001477974.1 CDS Spro_1742 NC_009832.1 1918853 1919956 R PFAM: ferredoxin; MOSC domain containing protein; MOSC domain protein beta barrel domain protein; KEGG: yen:YE1570 putative iron-sulfur binding protein; MOSC domain-containing protein complement(1918853..1919956) Serratia proteamaculans 568 5604781 YP_001477975.1 CDS rlmL NC_009832.1 1920060 1922180 D catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA; 23S rRNA m(2)G2445 methyltransferase 1920060..1922180 Serratia proteamaculans 568 5604782 YP_001477976.1 CDS Spro_1744 NC_009832.1 1922186 1924090 D Uup; in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity; mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth; ABC transporter ATPase 1922186..1924090 Serratia proteamaculans 568 5604783 YP_001477977.1 CDS Spro_1745 NC_009832.1 1924237 1925481 D TIGRFAM: integral membrane protein, PqiA family; PFAM: Paraquat-inducible protein A; KEGG: yen:YE1573 putative paraquat-inducible protein A; PqiA family integral membrane protein 1924237..1925481 Serratia proteamaculans 568 5604813 YP_001477978.1 CDS Spro_1746 NC_009832.1 1925468 1927114 D PFAM: Mammalian cell entry related domain protein; KEGG: eca:ECA2532 paraquat-inducible protein B; paraquat-inducible protein B 1925468..1927114 Serratia proteamaculans 568 5604814 YP_001477979.1 CDS Spro_1747 NC_009832.1 1927111 1927668 D PFAM: protein of unknown function DUF330; KEGG: yen:YE1575 putative lipoprotein protein; hypothetical protein 1927111..1927668 Serratia proteamaculans 568 5604815 YP_001477980.1 CDS Spro_1748 NC_009832.1 1927940 1928110 D PFAM: ribosome modulation factor; KEGG: stm:STM1066 ribosome modulation factor (involved in dimerization of 70S ribosomes); ribosome modulation factor 1927940..1928110 Serratia proteamaculans 568 5604869 YP_001477981.1 CDS Spro_1749 NC_009832.1 1928175 1929449 R FabF, beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP.; 3-oxoacyl-(acyl carrier protein) synthase II complement(1928175..1929449) Serratia proteamaculans 568 5604870 YP_001477982.1 CDS Spro_1750 NC_009832.1 1929446 1929973 R PFAM: helix-turn-helix HxlR type; KEGG: yen:YE1577 hypothetical protein; HxlR family transcriptional regulator complement(1929446..1929973) Serratia proteamaculans 568 5604874 YP_001477983.1 CDS Spro_1751 NC_009832.1 1930090 1930608 R catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP; 3-hydroxydecanoyl-(acyl carrier protein) dehydratase complement(1930090..1930608) Serratia proteamaculans 568 5604875 YP_001477984.1 CDS Spro_1752 NC_009832.1 1930677 1932449 R KEGG: yen:YE1579 putative Lon protease; putative Lon protease complement(1930677..1932449) Serratia proteamaculans 568 5604876 YP_001477985.1 CDS Spro_1753 NC_009832.1 1932638 1933096 D PFAM: protein of unknown function DUF1047; KEGG: yen:YE1580 hypothetical protein; hypothetical protein 1932638..1933096 Serratia proteamaculans 568 5604892 YP_001477986.1 CDS Spro_1754 NC_009832.1 1933209 1934285 R OmpA is believed to be a porin, involved in diffusion of nonspecific small solutes across the outer membrane. It is the most abundant integral protein of the outer membrane of E. coli, and it is known to play a role as a phage receptor, a mediator of F-factor dependent conjugation, and in maintaining the structural shape of the outer membrane; 3a; II*; G; d; outer membrane protein A complement(1933209..1934285) Serratia proteamaculans 568 5604893 YP_001477987.1 CDS Spro_1755 NC_009832.1 1934644 1935150 R PFAM: cell division inhibitor SulA; KEGG: yen:YE1582 putative cell division inhibitor; SOS cell division inhibitor complement(1934644..1935150) Serratia proteamaculans 568 5604894 YP_001477988.1 CDS Spro_1756 NC_009832.1 1935383 1936042 D PFAM: TfoX domain protein; KEGG: yen:YE1583 hypothetical protein; regulator of competence-specific genes 1935383..1936042 Serratia proteamaculans 568 5604921 YP_001477989.1 CDS Spro_1757 NC_009832.1 1936043 1938178 R TIGRFAM: hypothetical membrane protein; integral membrane protein, YccS/YhfK family; PFAM: protein of unknown function DUF893 YccS/YhfK; KEGG: yen:YE1584 hypothetical protein; hypothetical protein complement(1936043..1938178) Serratia proteamaculans 568 5604922 YP_001477990.1 CDS Spro_1758 NC_009832.1 1938205 1938666 R PFAM: protein of unknown function DUF307; KEGG: yen:YE1585 hypothetical protein; hypothetical protein complement(1938205..1938666) Serratia proteamaculans 568 5604923 YP_001477991.1 CDS helD NC_009832.1 1938823 1940877 D catalyzes the ATP-dependent unwinding of duplex DNA in the 3' to 5' direction with respect to the bound single strand; DNA helicase IV 1938823..1940877 Serratia proteamaculans 568 5604930 YP_001477992.1 CDS mgsA NC_009832.1 1940911 1941369 R catalyzes the formation of methylglyoxal from glycerone phosphate; methylglyoxal synthase complement(1940911..1941369) Serratia proteamaculans 568 5604931 YP_001477993.1 CDS Spro_1761 NC_009832.1 1941495 1942166 R KEGG: yen:YE1588 hypothetical protein; hypothetical protein complement(1941495..1942166) Serratia proteamaculans 568 5604932 YP_001477994.1 CDS Spro_1762 NC_009832.1 1942428 1942841 D PFAM: CoA-binding domain protein; KEGG: yen:YE1589 hypothetical protein; CoA-binding domain-containing protein 1942428..1942841 Serratia proteamaculans 568 5604933 YP_001477995.1 CDS Spro_1763 NC_009832.1 1942898 1943215 R TIGRFAM: hemimethylated DNA binding protein; PFAM: Hemimethylated DNA-binding region; KEGG: ent:Ent638_1478 hemimethylated DNA binding protein; heat shock protein HspQ complement(1942898..1943215) Serratia proteamaculans 568 5604934 YP_001477996.1 CDS Spro_1764 NC_009832.1 1943277 1944467 R SMART: PUA domain containing protein; KEGG: yps:YPTB1463 hypothetical protein; PUA domain-containing protein complement(1943277..1944467) Serratia proteamaculans 568 5604935 YP_001477997.1 CDS Spro_1765 NC_009832.1 1944560 1944838 D PFAM: acylphosphatase; KEGG: yen:YE1596 putative acylphosphatase; acylphosphatase 1944560..1944838 Serratia proteamaculans 568 5604952 YP_001477998.1 CDS Spro_1766 NC_009832.1 1944843 1945172 R PFAM: DsrC family protein; KEGG: ypi:YpsIP31758_2529 sulfurtransferase TusE; DsrC family protein complement(1944843..1945172) Serratia proteamaculans 568 5604953 YP_001477999.1 CDS Spro_1767 NC_009832.1 1945284 1945943 R PFAM: protein of unknown function UPF0005; KEGG: eca:ECA1763 putative membrane protein; hypothetical protein complement(1945284..1945943) Serratia proteamaculans 568 5604954 YP_001478000.1 CDS Spro_1768 NC_009832.1 1946401 1947234 R KEGG: ypi:YpsIP31758_0746 hypothetical protein; hypothetical protein complement(1946401..1947234) Serratia proteamaculans 568 5606351 YP_001478001.1 CDS Spro_1769 NC_009832.1 1947338 1947667 R KEGG: ypi:YpsIP31758_0749 hypothetical protein; hypothetical protein complement(1947338..1947667) Serratia proteamaculans 568 5604959 YP_001478002.1 CDS Spro_1770 NC_009832.1 1947664 1948032 R PFAM: protein of unknown function DUF1219; KEGG: yps:YPTB3866 hypothetical protein; hypothetical protein complement(1947664..1948032) Serratia proteamaculans 568 5604960 YP_001478003.1 CDS Spro_1771 NC_009832.1 1948094 1948429 R PFAM: YagBYeeUYfjZ family protein; KEGG: yps:YPTB3867 hypothetical protein; hypothetical protein complement(1948094..1948429) Serratia proteamaculans 568 5604961 YP_001478004.1 CDS Spro_1772 NC_009832.1 1948441 1948923 R PFAM: DNA repair protein RadC; KEGG: yps:YPTB3868 hypothetical protein; DNA repair protein RadC complement(1948441..1948923) Serratia proteamaculans 568 5604962 YP_001478005.1 CDS Spro_1773 NC_009832.1 1948956 1949414 R PFAM: Antirestriction protein; KEGG: ypi:YpsIP31758_0752 antirestriction protein, ArdB family; antirestriction protein complement(1948956..1949414) Serratia proteamaculans 568 5604963 YP_001478006.1 CDS Spro_1774 NC_009832.1 1949597 1950853 R PFAM: O-antigen polymerase; KEGG: yen:YE1727 putative inner membrane protein; O-antigen polymerase complement(1949597..1950853) Serratia proteamaculans 568 5604964 YP_001478007.1 CDS Spro_1775 NC_009832.1 1950906 1952075 R TIGRFAM: lipopolysaccharide heptosyltransferase III, putative; PFAM: glycosyl transferase family 9; KEGG: ypp:YPDSF_3215 lipopolysaccharide core biosynthesis protein; lipopolysaccharide heptosyltransferase III complement(1950906..1952075) Serratia proteamaculans 568 5604965 YP_001478008.1 CDS Spro_1776 NC_009832.1 1952678 1953154 R KEGG: aha:AHA_1082 hypothetical protein; hypothetical protein complement(1952678..1953154) Serratia proteamaculans 568 5604994 YP_001478009.1 CDS Spro_1777 NC_009832.1 1953167 1953451 R hypothetical protein complement(1953167..1953451) Serratia proteamaculans 568 5604995 YP_001478010.1 CDS Spro_1778 NC_009832.1 1953465 1953722 R hypothetical protein complement(1953465..1953722) Serratia proteamaculans 568 5604996 YP_001478011.1 CDS Spro_1779 NC_009832.1 1954180 1954581 R hypothetical protein complement(1954180..1954581) Serratia proteamaculans 568 5605032 YP_001478012.1 CDS Spro_1780 NC_009832.1 1954913 1956346 D KEGG: ecc:c3652 hypothetical protein YfjI; hypothetical protein 1954913..1956346 Serratia proteamaculans 568 5605033 YP_001478013.1 CDS Spro_1781 NC_009832.1 1956779 1957375 D KEGG: ecc:c3648 hypothetical protein; hypothetical protein 1956779..1957375 Serratia proteamaculans 568 5605034 YP_001478014.1 CDS Spro_1783 NC_009832.1 1958949 1959446 D PFAM: conserved hypothetical protein; KEGG: ent:Ent638_2916 uncharacterised conserved protein UCP028301; hypothetical protein 1958949..1959446 Serratia proteamaculans 568 5606270 YP_001478015.1 CDS Spro_1784 NC_009832.1 1959481 1961028 D PFAM: protein of unknown function DUF877; KEGG: ent:Ent638_2915 protein of unknown function DUF877; hypothetical protein 1959481..1961028 Serratia proteamaculans 568 5605060 YP_001478016.1 CDS Spro_1785 NC_009832.1 1961045 1962385 D PFAM: protein of unknown function DUF876; KEGG: kpn:KPN_01324 hypothetical protein; hypothetical protein 1961045..1962385 Serratia proteamaculans 568 5605061 YP_001478017.1 CDS Spro_1786 NC_009832.1 1962382 1963071 D KEGG: kpn:KPN_01325 hypothetical protein; hypothetical protein 1962382..1963071 Serratia proteamaculans 568 5605078 YP_001478018.1 CDS Spro_1787 NC_009832.1 1963068 1964777 D PFAM: OmpA/MotB domain protein; KEGG: kpn:KPN_01326 putative outer membrane protein; OmpA/MotB domain-containing protein 1963068..1964777 Serratia proteamaculans 568 5605079 YP_001478019.1 CDS Spro_1788 NC_009832.1 1964781 1965272 D PFAM: protein of unknown function DUF796; KEGG: kpn:KPN_01327 hypothetical protein; hypothetical protein 1964781..1965272 Serratia proteamaculans 568 5605080 YP_001478020.1 CDS Spro_1789 NC_009832.1 1965445 1968099 D PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: kpn:KPN_01328 putative protease; ATPase 1965445..1968099 Serratia proteamaculans 568 5605118 YP_001478021.1 CDS Spro_1790 NC_009832.1 1968619 1970997 D PFAM: Rhs element Vgr protein; KEGG: kpn:KPN_01329 hypothetical protein; Rhs element Vgr protein 1968619..1970997 Serratia proteamaculans 568 5605119 YP_001478022.1 CDS Spro_1791 NC_009832.1 1971004 1971783 D KEGG: plu:plu3245 hypothetical protein; hypothetical protein 1971004..1971783 Serratia proteamaculans 568 5605120 YP_001478023.1 CDS Spro_1792 NC_009832.1 1971895 1972428 D KEGG: plu:plu3242 hypothetical protein; hypothetical protein 1971895..1972428 Serratia proteamaculans 568 5605136 YP_001478024.1 CDS Spro_1793 NC_009832.1 1972537 1973070 D KEGG: plu:plu3242 hypothetical protein; hypothetical protein 1972537..1973070 Serratia proteamaculans 568 5605137 YP_001478025.1 CDS Spro_1794 NC_009832.1 1973179 1973691 D KEGG: plu:plu3243 hypothetical protein; hypothetical protein 1973179..1973691 Serratia proteamaculans 568 5605138 YP_001478026.1 CDS Spro_1795 NC_009832.1 1973679 1976126 D KEGG: plu:plu3241 hypothetical protein; hypothetical protein 1973679..1976126 Serratia proteamaculans 568 5605166 YP_001478027.1 CDS Spro_1796 NC_009832.1 1976145 1976402 D PFAM: PAAR repeat-containing protein; KEGG: plu:plu3240 hypothetical protein; PAAR repeat-containing protein 1976145..1976402 Serratia proteamaculans 568 5605167 YP_001478028.1 CDS Spro_1797 NC_009832.1 1976576 1977538 D KEGG: plu:plu3239 hypothetical protein; hypothetical protein 1976576..1977538 Serratia proteamaculans 568 5605168 YP_001478029.1 CDS Spro_1798 NC_009832.1 1977765 1980968 D PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: kpn:KPN_01342 hypothetical protein; ImcF domain-containing protein 1977765..1980968 Serratia proteamaculans 568 5605193 YP_001478030.1 CDS Spro_1799 NC_009832.1 1980968 1982560 D PFAM: ImpA domain protein; KEGG: ypi:YpsIP31758_2492 ImpA domain protein; ImpA domain-containing protein 1980968..1982560 Serratia proteamaculans 568 5605194 YP_001478031.1 CDS Spro_1800 NC_009832.1 1982588 1984342 D PFAM: protein of unknown function DUF879; KEGG: kpn:KPN_01347 hypothetical protein; hypothetical protein 1982588..1984342 Serratia proteamaculans 568 5605195 YP_001478032.1 CDS Spro_1801 NC_009832.1 1984306 1985391 D PFAM: protein of unknown function DUF1305; KEGG: ypi:YpsIP31758_0801 hypothetical protein; hypothetical protein 1984306..1985391 Serratia proteamaculans 568 5605205 YP_001478033.1 CDS Spro_1802 NC_009832.1 1985369 1985914 D KEGG: ypi:YpsIP31758_2487 hypothetical protein; hypothetical protein 1985369..1985914 Serratia proteamaculans 568 5605206 YP_001478034.1 CDS Spro_1803 NC_009832.1 1985914 1986363 D PFAM: GPW/gp25 family protein; KEGG: ypi:YpsIP31758_2486 hypothetical protein; GPW/gp25 family protein 1985914..1986363 Serratia proteamaculans 568 5605210 YP_001478035.1 CDS Spro_1804 NC_009832.1 1986614 1988005 D PFAM: ImpA domain protein; KEGG: ent:Ent638_2906 ImpA domain protein; ImpA domain-containing protein 1986614..1988005 Serratia proteamaculans 568 5605211 YP_001478036.1 CDS Spro_1805 NC_009832.1 1988172 1990166 R TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; KEGG: kpn:KPN_pKPN3p05958 secondary glycine betaine transporter BetU; choline/carnitine/betaine transporter complement(1988172..1990166) Serratia proteamaculans 568 5605212 YP_001478037.1 CDS Spro_1806 NC_009832.1 1990629 1990844 D hypothetical protein 1990629..1990844 Serratia proteamaculans 568 5605241 YP_001478038.1 CDS Spro_1807 NC_009832.1 1990952 1992361 R PFAM: cytochrome c class I; KEGG: yen:YE1369 putative dehydrogenase, cytochrome c subunit; gluconate 2-dehydrogenase complement(1990952..1992361) Serratia proteamaculans 568 5605242 YP_001478039.1 CDS Spro_1808 NC_009832.1 1992358 1994013 R KEGG: yen:YE1370 putative dehydrogenase subunit; putative dehydrogenase subunit complement(1992358..1994013) Serratia proteamaculans 568 5605243 YP_001478040.1 CDS Spro_1809 NC_009832.1 1994029 1994589 R KEGG: yen:YE1370A putative dehydrogenase subunit; putative dehydrogenase subunit complement(1994029..1994589) Serratia proteamaculans 568 5605273 YP_001478041.1 CDS Spro_1810 NC_009832.1 1994822 1995619 R PFAM: DNA/RNA non-specific endonuclease; KEGG: ypi:YpsIP31758_B0090 putative endonuclease; nuclease complement(1994822..1995619) Serratia proteamaculans 568 5605274 YP_001478042.1 CDS Spro_1811 NC_009832.1 1995785 1997245 R TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter; KEGG: ecv:APECO1_516 Rac prophage; potassium transporter subunit; TrkH family potassium uptake protein complement(1995785..1997245) Serratia proteamaculans 568 5605275 YP_001478043.1 CDS Spro_1812 NC_009832.1 1997383 1997772 R hypothetical protein complement(1997383..1997772) Serratia proteamaculans 568 5605313 YP_001478044.1 CDS Spro_1813 NC_009832.1 1997934 1998533 R stationary phase protein that binds TrpR repressor; TrpR binding protein WrbA complement(1997934..1998533) Serratia proteamaculans 568 5605314 YP_001478045.1 CDS Spro_1814 NC_009832.1 1998612 1999229 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: aha:AHA_3853 transporter, LysE family; lysine exporter protein LysE/YggA complement(1998612..1999229) Serratia proteamaculans 568 5605315 YP_001478046.1 CDS Spro_1815 NC_009832.1 1999297 2000220 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfl:PFL_4583 CDA peptide synthetase I; LysR family transcriptional regulator 1999297..2000220 Serratia proteamaculans 568 5605360 YP_001478047.1 CDS Spro_1816 NC_009832.1 2000217 2000792 R PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: ppf:Pput_3508 transcriptional regulator, XRE family; XRE family transcriptional regulator complement(2000217..2000792) Serratia proteamaculans 568 5605361 YP_001478048.1 CDS Spro_1817 NC_009832.1 2000860 2001777 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: pst:PSPTO_3470 hypothetical protein; hypothetical protein 2000860..2001777 Serratia proteamaculans 568 5605362 YP_001478049.1 CDS Spro_1818 NC_009832.1 2001806 2003125 R TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: yen:YE1944 putative membrane permease; uracil-xanthine permease complement(2001806..2003125) Serratia proteamaculans 568 5605392 YP_001478050.1 CDS Spro_1819 NC_009832.1 2003182 2003709 R PFAM: flavin reductase domain protein FMN-binding; KEGG: yen:YE1945 4-hydroxyphenylacetate 3-monooxygenase coupling protein; flavin reductase domain-containing protein complement(2003182..2003709) Serratia proteamaculans 568 5605393 YP_001478051.1 CDS Spro_1820 NC_009832.1 2003724 2004527 R PFAM: alpha/beta hydrolase fold; KEGG: yen:YE1947 putative hydrolase; alpha/beta hydrolase fold domain-containing protein complement(2003724..2004527) Serratia proteamaculans 568 5605394 YP_001478052.1 CDS Spro_1821 NC_009832.1 2004552 2004938 R PFAM: Endoribonuclease L-PSP; KEGG: yen:YE1948 hypothetical protein; endoribonuclease L-PSP complement(2004552..2004938) Serratia proteamaculans 568 5605418 YP_001478053.1 CDS Spro_1822 NC_009832.1 2004987 2005733 R PFAM: isochorismatase hydrolase; KEGG: yen:YE1949 putative isochorismatase; isochorismatase hydrolase complement(2004987..2005733) Serratia proteamaculans 568 5605419 YP_001478054.1 CDS Spro_1823 NC_009832.1 2005733 2006833 R PFAM: luciferase family protein; KEGG: yen:YE1950 alkanesulfonate monooxygenase; luciferase family protein complement(2005733..2006833) Serratia proteamaculans 568 5605420 YP_001478055.1 CDS Spro_1824 NC_009832.1 2007119 2007793 D PFAM: regulatory protein TetR; Tetracycline transcriptional regulator YcdC domain protein; KEGG: yen:YE1951 putative TetR-family transcriptional regulatory protein; TetR family transcriptional regulator 2007119..2007793 Serratia proteamaculans 568 5605467 YP_001478056.1 CDS Spro_1825 NC_009832.1 2007837 2009237 R involved in the transport across the cytoplasmic membrane of D-alanine, D-serine and glycine; D-alanine/D-serine/glycine permease complement(2007837..2009237) Serratia proteamaculans 568 5605468 YP_001478057.1 CDS Spro_1826 NC_009832.1 2009926 2010420 R KEGG: ypi:YpsIP31758_0269 DedA family protein; DedA family protein complement(2009926..2010420) Serratia proteamaculans 568 5605469 YP_001478058.1 CDS Spro_1827 NC_009832.1 2010577 2010876 D PFAM: Antibiotic biosynthesis monooxygenase; KEGG: yen:YE3018 hypothetical protein; antibiotic biosynthesis monooxygenase 2010577..2010876 Serratia proteamaculans 568 5605527 YP_001478059.1 CDS Spro_1828 NC_009832.1 2010981 2011703 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: sma:SAV1350 putative enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase complement(2010981..2011703) Serratia proteamaculans 568 5605528 YP_001478060.1 CDS Spro_1829 NC_009832.1 2011696 2012868 R PFAM: major facilitator superfamily MFS_1; KEGG: rru:Rru_A0797 major facilitator transporter superfamily MFS_1; major facilitator transporter complement(2011696..2012868) Serratia proteamaculans 568 5605563 YP_001478061.1 CDS Spro_1830 NC_009832.1 2012865 2014076 R catalyzes the formation of 5-aminolevulinate from succinyl-CoA and glycine; 5-aminolevulinate synthase complement(2012865..2014076) Serratia proteamaculans 568 5605564 YP_001478062.1 CDS Spro_1831 NC_009832.1 2014092 2015303 R TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: csa:Csal_0301 beta-ketoadipyl CoA thiolase; acetyl-CoA acetyltransferase complement(2014092..2015303) Serratia proteamaculans 568 5605565 YP_001478063.1 CDS Spro_1832 NC_009832.1 2015313 2016842 R PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: pin:Ping_0657 3-hydroxybutyryl-CoA dehydrogenase; 3-hydroxybutyryl-CoA dehydrogenase complement(2015313..2016842) Serratia proteamaculans 568 5605628 YP_001478064.1 CDS Spro_1833 NC_009832.1 2017190 2017906 D PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; KEGG: bvi:Bcep1808_6456 autoinducer-binding domain protein; LuxR family transcriptional regulator 2017190..2017906 Serratia proteamaculans 568 5605629 YP_001478065.1 CDS Spro_1834 NC_009832.1 2018084 2018512 D PFAM: UspA domain protein; KEGG: eca:ECA1769 hypothetical protein; UspA domain-containing protein 2018084..2018512 Serratia proteamaculans 568 5605630 YP_001478066.1 CDS Spro_1835 NC_009832.1 2018559 2019572 R PFAM: Malate/L-lactate dehydrogenase; KEGG: kpn:KPN_04791 putative dehydrogenase; malate/L-lactate dehydrogenase complement(2018559..2019572) Serratia proteamaculans 568 5605682 YP_001478067.1 CDS Spro_1836 NC_009832.1 2019591 2021156 R PFAM: amino acid permease-associated region; KEGG: pfl:PFL_1414 amino acid transporter, putative; amino acid permease-associated protein complement(2019591..2021156) Serratia proteamaculans 568 5605683 YP_001478068.1 CDS Spro_1837 NC_009832.1 2021201 2022811 R PFAM: aldehyde dehydrogenase; KEGG: pae:PA2217 probable aldehyde dehydrogenase; aldehyde dehydrogenase complement(2021201..2022811) Serratia proteamaculans 568 5605684 YP_001478069.1 CDS Spro_1838 NC_009832.1 2022869 2023789 R PFAM: dihydrodipicolinate synthetase; KEGG: bch:Bcen2424_4139 dihydrodipicolinate synthetase; dihydrodipicolinate synthetase complement(2022869..2023789) Serratia proteamaculans 568 5605705 YP_001478070.1 CDS Spro_1839 NC_009832.1 2023997 2024842 R PFAM: helix-turn-helix- domain containing protein AraC type; PAS fold-4 domain protein; KEGG: plu:plu2244 hypothetical protein; AraC family transcriptional regulator complement(2023997..2024842) Serratia proteamaculans 568 5605706 YP_001478071.1 CDS Spro_1840 NC_009832.1 2025128 2026075 D PFAM: proline racemase; KEGG: pap:PSPA7_4122 hypothetical protein; proline racemase 2025128..2026075 Serratia proteamaculans 568 5605707 YP_001478072.1 CDS Spro_1841 NC_009832.1 2026075 2027199 D PFAM: FAD dependent oxidoreductase; KEGG: plu:plu2242 hypothetical protein; FAD dependent oxidoreductase 2026075..2027199 Serratia proteamaculans 568 5605730 YP_001478073.1 CDS Spro_1842 NC_009832.1 2027196 2027450 D PFAM: ferredoxin; KEGG: bam:Bamb_3552 ferredoxin; ferredoxin 2027196..2027450 Serratia proteamaculans 568 5605731 YP_001478074.1 CDS Spro_1843 NC_009832.1 2027443 2028705 D PFAM: BFD domain protein [2Fe-2S]-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bur:Bcep18194_B1891 pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2027443..2028705 Serratia proteamaculans 568 5605732 YP_001478075.1 CDS Spro_1844 NC_009832.1 2028803 2029159 R KEGG: plu:plu3625 hypothetical protein; hypothetical protein complement(2028803..2029159) Serratia proteamaculans 568 5605743 YP_001478076.1 CDS Spro_1845 NC_009832.1 2029575 2029934 D hypothetical protein 2029575..2029934 Serratia proteamaculans 568 5605744 YP_001478077.1 CDS Spro_1846 NC_009832.1 2030166 2030597 D KEGG: yen:YE2300 hypothetical protein; hypothetical protein 2030166..2030597 Serratia proteamaculans 568 5605745 YP_001478078.1 CDS Spro_1847 NC_009832.1 2030674 2030898 R KEGG: yen:YE1832 hypothetical protein; hypothetical protein complement(2030674..2030898) Serratia proteamaculans 568 5605809 YP_001478079.1 CDS Spro_1848 NC_009832.1 2031663 2032319 D in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system; in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system; response regulator 2031663..2032319 Serratia proteamaculans 568 5605810 YP_001478080.1 CDS uvrC NC_009832.1 2032312 2034144 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 2032312..2034144 Serratia proteamaculans 568 5605811 YP_001478081.1 CDS Spro_1850 NC_009832.1 2034203 2034751 D KEGG: ypi:YpsIP31758_2251 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; phosphatidylglycerophosphate synthetase 2034203..2034751 Serratia proteamaculans 568 5605874 YP_001478082.1 CDS Spro_1851 NC_009832.1 2035409 2035720 D KEGG: plu:plu2537 hypothetical protein; hypothetical protein 2035409..2035720 Serratia proteamaculans 568 5605782 YP_001478083.1 CDS Spro_1852 NC_009832.1 2035723 2036016 D SMART: helix-turn-helix domain protein; KEGG: plu:plu2536 hypothetical protein; XRE family transcriptional regulator 2035723..2036016 Serratia proteamaculans 568 5605876 YP_001478084.1 CDS Spro_1853 NC_009832.1 2036319 2036549 R hypothetical protein complement(2036319..2036549) Serratia proteamaculans 568 5605929 YP_001478085.1 CDS Spro_1854 NC_009832.1 2036766 2037908 R PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: pfo:Pfl_0722 transcriptional regulator, RpiR family; RpiR family transcriptional regulator complement(2036766..2037908) Serratia proteamaculans 568 5605930 YP_001478086.1 CDS Spro_1855 NC_009832.1 2038312 2038617 D PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: plu:plu2754 PTS system, cellobiose-specific IIB component; phosphotransferase system lactose/cellobiose-specific IIB subunit 2038312..2038617 Serratia proteamaculans 568 5605931 YP_001478087.1 CDS Spro_1856 NC_009832.1 2038729 2039055 D PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit; KEGG: kpn:KPN_04368 putative PEP-dependent phosphotransferase enzyme III; phosphotransferase system PTS lactose/cellobiose-specific IIA subunit 2038729..2039055 Serratia proteamaculans 568 5605932 YP_001478088.1 CDS Spro_1857 NC_009832.1 2039048 2040349 D PFAM: glycoside hydrolase family 4; KEGG: ypi:YpsIP31758_3951 6-phospho-beta-glucosidase; glycoside hydrolase family protein 2039048..2040349 Serratia proteamaculans 568 5605933 YP_001478089.1 CDS Spro_1858 NC_009832.1 2040405 2041766 D KEGG: kpn:KPN_04650 putative phosphotransferase protein; TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; PTS system, cellobiose-specific IIC subunit; PFAM: phosphotransferase system EIIC; PTS system lactose/cellobiose family transporter subunit IIC 2040405..2041766 Serratia proteamaculans 568 5605952 YP_001478090.1 CDS Spro_1859 NC_009832.1 2041985 2043649 D catalyzes the addition of a phosphoethanolamine group to the outer Kdo residue of lipopolysaccharide; phosphoethanolamine transferase 2041985..2043649 Serratia proteamaculans 568 5605953 YP_001478091.1 CDS Spro_1860 NC_009832.1 2043740 2045242 R TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: General substrate transporter; major facilitator superfamily MFS_1; Osmosensory transporter coiled coil; KEGG: yen:YE3594 proline/betaine transporter; proline/glycine betaine transporter complement(2043740..2045242) Serratia proteamaculans 568 5605954 YP_001478092.1 CDS Spro_1861 NC_009832.1 2045647 2047011 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: ppd:Ppro_2218 RND efflux system, outer membrane lipoprotein, NodT family; RND efflux system outer membrane lipoprotein complement(2045647..2047011) Serratia proteamaculans 568 5605976 YP_001478093.1 CDS Spro_1862 NC_009832.1 2047015 2048955 R PFAM: ABC transporter related; protein of unknown function DUF214; SMART: AAA ATPase; KEGG: sgl:SG1459 putative ABC transporter ATP-binding component; ABC transporter-like protein complement(2047015..2048955) Serratia proteamaculans 568 5605977 YP_001478094.1 CDS Spro_1863 NC_009832.1 2048952 2050133 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: sgl:SG1458 putative secretion protein; RND family efflux transporter MFP subunit complement(2048952..2050133) Serratia proteamaculans 568 5605978 YP_001478095.1 CDS Spro_1864 NC_009832.1 2050670 2050969 D KEGG: sgl:SG1153 hypothetical protein; hypothetical protein 2050670..2050969 Serratia proteamaculans 568 5606251 YP_001478096.1 CDS Spro_1865 NC_009832.1 2051061 2051600 D KEGG: yen:YE2596 hypothetical protein; hypothetical protein 2051061..2051600 Serratia proteamaculans 568 5606092 YP_001478097.1 CDS Spro_1866 NC_009832.1 2051670 2051801 D hypothetical protein 2051670..2051801 Serratia proteamaculans 568 5606093 YP_001478098.1 CDS Spro_1867 NC_009832.1 2052276 2053997 R the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli; potassium/proton antiporter complement(2052276..2053997) Serratia proteamaculans 568 5606151 YP_001478099.1 CDS Spro_1868 NC_009832.1 2054284 2054508 R KEGG: yen:YE1603 hypothetical protein; hypothetical protein complement(2054284..2054508) Serratia proteamaculans 568 5606152 YP_001478100.1 CDS mdoC NC_009832.1 2054834 2055964 R required for the transfer of succinyl residues to the glucan backbone; glucans biosynthesis protein complement(2054834..2055964) Serratia proteamaculans 568 5606153 YP_001478101.1 CDS mdoG NC_009832.1 2056223 2057791 D involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan; glucan biosynthesis protein G 2056223..2057791 Serratia proteamaculans 568 5606154 YP_001478102.1 CDS Spro_1871 NC_009832.1 2057784 2060345 D necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space; glucosyltransferase MdoH 2057784..2060345 Serratia proteamaculans 568 5606155 YP_001478103.1 CDS Spro_1872 NC_009832.1 2060505 2060753 D PFAM: protein of unknown function DUF1375; KEGG: yps:YPTB2492 hypothetical protein; hypothetical protein 2060505..2060753 Serratia proteamaculans 568 5606156 YP_001478104.1 CDS Spro_1873 NC_009832.1 2060744 2061304 R KEGG: bte:BTH_II1582 hypothetical protein; hypothetical protein complement(2060744..2061304) Serratia proteamaculans 568 5606159 YP_001478105.1 CDS Spro_1874 NC_009832.1 2061370 2061747 R KEGG: spt:SPA1698 acidic protein MsyB; multicopy suppressor of SecY; hypothetical protein complement(2061370..2061747) Serratia proteamaculans 568 5606160 YP_001478106.1 CDS Spro_1875 NC_009832.1 2061955 2063625 D TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: kpn:KPN_03016 putative isopropylmalate/homocitrate/citramalate synthase; 2-isopropylmalate synthase 2061955..2063625 Serratia proteamaculans 568 5606161 YP_001478107.1 CDS Spro_1876 NC_009832.1 2063610 2064371 R PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: ent:Ent638_3166 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(2063610..2064371) Serratia proteamaculans 568 5606168 YP_001478108.1 CDS Spro_1877 NC_009832.1 2064513 2064824 D PFAM: regulatory protein ArsR; KEGG: cvi:CV_0084 probable transcriptional regulator, ArsR family; ArsR family transcriptional regulator 2064513..2064824 Serratia proteamaculans 568 5606169 YP_001478109.1 CDS Spro_1878 NC_009832.1 2064821 2065255 D PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: cvi:CV_0083 hypothetical protein; hypothetical protein 2064821..2065255 Serratia proteamaculans 568 5606170 YP_001478110.1 CDS Spro_1879 NC_009832.1 2065260 2065679 D PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: nmu:Nmul_A1684 YeeE/YedE; hypothetical protein 2065260..2065679 Serratia proteamaculans 568 5606235 YP_001478111.1 CDS Spro_1880 NC_009832.1 2065679 2066077 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: vfi:VFA0660 prolyl endopeptidase; glyoxalase/bleomycin resistance protein/dioxygenase 2065679..2066077 Serratia proteamaculans 568 5606236 YP_001478112.1 CDS Spro_1881 NC_009832.1 2066126 2067679 R KEGG: ent:Ent638_0823 amino acid/peptide transporter; TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor type I/II extracellular region; major facilitator superfamily MFS_1; amino acid/peptide transporter complement(2066126..2067679) Serratia proteamaculans 568 5606246 YP_001478113.1 CDS Spro_1882 NC_009832.1 2068156 2069391 R PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE1610 putative MFS-family transport protein; major facilitator transporter complement(2068156..2069391) Serratia proteamaculans 568 5606247 YP_001478114.1 CDS Spro_1883 NC_009832.1 2069592 2069876 R PFAM: YCII-related; KEGG: yen:YE1740 hypothetical protein; YCII-like protein complement(2069592..2069876) Serratia proteamaculans 568 5606248 YP_001478115.1 CDS Spro_1884 NC_009832.1 2069981 2070901 R Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis lauroyl acyltransferase complement(2069981..2070901) Serratia proteamaculans 568 5606301 YP_001478116.1 CDS Spro_1885 NC_009832.1 2071148 2071573 R KEGG: eca:ECA1780 putative NADH-dependent flavin oxidoreductase; NADH:flavin oxidoreductase complement(2071148..2071573) Serratia proteamaculans 568 5606302 YP_001478117.1 CDS Spro_1886 NC_009832.1 2071749 2072819 D PFAM: Rhodanese domain protein; KEGG: ypi:YpsIP31758_1560 rhodanese domain protein; hypothetical protein 2071749..2072819 Serratia proteamaculans 568 5606303 YP_001478118.1 CDS Spro_1887 NC_009832.1 2072862 2073440 R PFAM: YceI family protein; KEGG: yen:YE1254 hypothetical protein; YceI family protein complement(2072862..2073440) Serratia proteamaculans 568 5606310 YP_001478119.1 CDS Spro_1888 NC_009832.1 2073464 2074018 R PFAM: cytochrome B561; KEGG: yen:YE1253 hypothetical protein; cytochrome B561 complement(2073464..2074018) Serratia proteamaculans 568 5606311 YP_001478120.1 CDS tqsA NC_009832.1 2074443 2075495 D transport of quorum-sensing signal; mutations in this gene alters the transport of the quorum-sensing signal autoinducer 2 (AI-2) which affects expression of a large number of genes; putative transport protein 2074443..2075495 Serratia proteamaculans 568 5606312 YP_001478121.1 CDS Spro_1890 NC_009832.1 2075605 2075721 R KEGG: ypi:YpsIP31758_1562 hypothetical protein; hypothetical protein complement(2075605..2075721) Serratia proteamaculans 568 5606319 YP_001478122.1 CDS Spro_1891 NC_009832.1 2075842 2076468 R PFAM: regulatory protein LuxR; KEGG: yen:YE1621 putative LuxR-family regulatory protein; LuxR family transcriptional regulator complement(2075842..2076468) Serratia proteamaculans 568 5606320 YP_001478123.1 CDS solA NC_009832.1 2076695 2077810 R catalyzes the demethylation of N-methyl-L-tryptophan forming L-tryptophan and formaldehyde; FAD-binding; can also catalyze the demethylation of other N-methyl amino acids; N-methyltryptophan oxidase complement(2076695..2077810) Serratia proteamaculans 568 5606321 YP_001478124.1 CDS bssS NC_009832.1 2077953 2078207 R BssS; regulator of biofilm through signal secretion; disruption of this gene in Escherichia coli led to effects on biofilm formation, alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2 uptake and processing; biofilm formation regulatory protein BssS complement(2077953..2078207) Serratia proteamaculans 568 5606330 YP_001478125.1 CDS Spro_1894 NC_009832.1 2078406 2078684 R KEGG: eca:ECA1785 hypothetical protein; hypothetical protein complement(2078406..2078684) Serratia proteamaculans 568 5606331 YP_001478126.1 CDS Spro_1895 NC_009832.1 2078822 2079061 R PFAM: DinI family protein; KEGG: yen:YE1624 DNA-damage-inducible protein I; DNA damage-inducible protein I complement(2078822..2079061) Serratia proteamaculans 568 5606332 YP_001478127.1 CDS Spro_1896 NC_009832.1 2079142 2080188 R catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase complement(2079142..2080188) Serratia proteamaculans 568 5606386 YP_001478128.1 CDS Spro_1897 NC_009832.1 2080413 2080700 D PFAM: Antibiotic biosynthesis monooxygenase; KEGG: yen:YE1626 hypothetical protein; antibiotic biosynthesis monooxygenase 2080413..2080700 Serratia proteamaculans 568 5606387 YP_001478129.1 CDS rne NC_009832.1 2080764 2084132 R bifunctional ribonuclease E/endoribonuclease/RNA-binding protein/RNA degradosome binding protein; forms part of the membrane-associated degradosome complex along with PNPase, RhlB, and enolase; ribonuclease E complement(2080764..2084132) Serratia proteamaculans 568 5606388 YP_001478130.1 CDS Spro_1899 NC_009832.1 2084685 2085647 D catalyzes the transformation of uracil to pseudouracil at nucleotides U955, U2504, and U2580 in 23S rRNA; 23S rRNA pseudouridylate synthase C 2084685..2085647 Serratia proteamaculans 568 5606415 YP_001478131.1 CDS Spro_1900 NC_009832.1 2085655 2086275 R TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: ent:Ent638_1602 maf protein; maf protein complement(2085655..2086275) Serratia proteamaculans 568 5606416 YP_001478132.1 CDS Spro_1901 NC_009832.1 2086378 2086899 D PFAM: protein of unknown function DUF177; KEGG: yen:YE1630 hypothetical protein; hypothetical protein 2086378..2086899 Serratia proteamaculans 568 5606417 YP_001478133.1 CDS rpmF NC_009832.1 2086916 2087083 D some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 2086916..2087083 Serratia proteamaculans 568 5606427 YP_001478134.1 CDS Spro_1903 NC_009832.1 2087095 2088129 D involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; putative glycerol-3-phosphate acyltransferase PlsX 2087095..2088129 Serratia proteamaculans 568 5606428 YP_001478135.1 CDS Spro_1904 NC_009832.1 2088136 2089089 D FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-(acyl carrier protein) synthase III 2088136..2089089 Serratia proteamaculans 568 5606429 YP_001478136.1 CDS Spro_1905 NC_009832.1 2089107 2090036 D TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: yen:YE1634 malonyl CoA-acyl carrier protein transacylase; malonyl CoA-acyl carrier protein transacylase 2089107..2090036 Serratia proteamaculans 568 5606439 YP_001478137.1 CDS fabG NC_009832.1 2090048 2090782 D catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-(acyl-carrier-protein) reductase 2090048..2090782 Serratia proteamaculans 568 5606440 YP_001478138.1 CDS acpP NC_009832.1 2090937 2091173 D carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 2090937..2091173 Serratia proteamaculans 568 5606458 YP_001478139.1 CDS Spro_1908 NC_009832.1 2091255 2092496 D FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II 2091255..2092496 Serratia proteamaculans 568 5606459 YP_001478140.1 CDS Spro_1909 NC_009832.1 2092673 2093470 D catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate; 4-amino-4-deoxychorismate lyase 2092673..2093470 Serratia proteamaculans 568 5606460 YP_001478141.1 CDS Spro_1910 NC_009832.1 2093484 2094509 D PFAM: aminodeoxychorismate lyase; KEGG: yen:YE1639 hypothetical protein; aminodeoxychorismate lyase 2093484..2094509 Serratia proteamaculans 568 5606490 YP_001478142.1 CDS tmk NC_009832.1 2094499 2095137 D catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase 2094499..2095137 Serratia proteamaculans 568 5606491 YP_001478143.1 CDS Spro_1912 NC_009832.1 2095137 2096144 D catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' 2095137..2096144 Serratia proteamaculans 568 5606492 YP_001478144.1 CDS Spro_1913 NC_009832.1 2096159 2096935 D TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: yen:YE1642 putative deoxyribonuclease; putative metallodependent hydrolase 2096159..2096935 Serratia proteamaculans 568 5606554 YP_001478145.1 CDS Spro_1914 NC_009832.1 2097274 2098707 D phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system glucose-specific transporter subunits IIBC 2097274..2098707 Serratia proteamaculans 568 5606555 YP_001478146.1 CDS Spro_1915 NC_009832.1 2098764 2099234 R Transcriptional regulator that represses the manganese transporter MntH when manganese is present; manganese transport regulator MntR complement(2098764..2099234) Serratia proteamaculans 568 5606556 YP_001478147.1 CDS Spro_1916 NC_009832.1 2099464 2100768 D TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein; KEGG: bbt:BBta_1556 manganese/divalent cation transport protein (NRAMP family); Mn2+/Fe2+ transporter 2099464..2100768 Serratia proteamaculans 568 5606577 YP_001478148.1 CDS Spro_1917 NC_009832.1 2100822 2101568 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: yen:YE3354 putative oxidoreductase; short chain dehydrogenase complement(2100822..2101568) Serratia proteamaculans 568 5606578 YP_001478149.1 CDS Spro_1918 NC_009832.1 2101668 2102045 D PFAM: helix-turn-helix HxlR type; KEGG: eca:ECA0746 putative transcriptional regulator; HxlR family transcriptional regulator 2101668..2102045 Serratia proteamaculans 568 5606579 YP_001478150.1 CDS Spro_1919 NC_009832.1 2102042 2102947 R PFAM: extracellular solute-binding protein family 3; KEGG: eca:ECA2157 ABC transporter, substrate binding protein; extracellular solute-binding protein complement(2102042..2102947) Serratia proteamaculans 568 5606628 YP_001478151.1 CDS Spro_1920 NC_009832.1 2103202 2103552 D PFAM: histidine triad (HIT) protein; KEGG: ypi:YpsIP31758_1588 histidine triad nucleotide-binding protein HinT; histidine triad (HIT) protein 2103202..2103552 Serratia proteamaculans 568 5606629 YP_001478152.1 CDS Spro_1921 NC_009832.1 2103565 2103954 D PFAM: protein of unknown function DUF1425; KEGG: ypi:YpsIP31758_1589 putative lipoprotein; hypothetical protein 2103565..2103954 Serratia proteamaculans 568 5606630 YP_001478153.1 CDS Spro_1922 NC_009832.1 2103982 2104569 D TIGRFAM: membrane lipoprotein lipid attachment site; KEGG: eca:ECA1811 putative lipoprotein; membrane lipoprotein lipid attachment site 2103982..2104569 Serratia proteamaculans 568 5606645 YP_001478154.1 CDS Spro_1923 NC_009832.1 2104550 2105419 D PFAM: aminoglycoside phosphotransferase; KEGG: ypi:YpsIP31758_1591 thiamine kinase; thiamine kinase 2104550..2105419 Serratia proteamaculans 568 5606646 YP_001478155.1 CDS Spro_1924 NC_009832.1 2105451 2106470 D hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides; beta-hexosaminidase 2105451..2106470 Serratia proteamaculans 568 5606647 YP_001478156.1 CDS Spro_1925 NC_009832.1 2106543 2107085 D PFAM: protein of unknown function UPF0227; KEGG: ypi:YpsIP31758_1593 hypothetical protein; hypothetical protein 2106543..2107085 Serratia proteamaculans 568 5606654 YP_001478157.1 CDS Spro_1926 NC_009832.1 2107418 2108722 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: yen:YE1707 NADH dehydrogenase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2107418..2108722 Serratia proteamaculans 568 5606655 YP_001478158.1 CDS Spro_1927 NC_009832.1 2109084 2109620 D PFAM: 17 kDa surface antigen; KEGG: eci:UTI89_C1238 hypothetical protein YcfJ; hypothetical protein 2109084..2109620 Serratia proteamaculans 568 5606656 YP_001478159.1 CDS Spro_1928 NC_009832.1 2109912 2110397 D PFAM: protein of unknown function UPF0074; KEGG: kpn:KPN_02971 putative transcriptional regulator; BadM/Rrf2 family transcriptional regulator 2109912..2110397 Serratia proteamaculans 568 5606677 YP_001478160.1 CDS Spro_1929 NC_009832.1 2110480 2113626 R TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: kpn:KPN_02970 integral transmembrane protein; acridine resistance; hydrophobe/amphiphile efflux-1 (HAE1) family protein complement(2110480..2113626) Serratia proteamaculans 568 5606678 YP_001478161.1 CDS Spro_1930 NC_009832.1 2113650 2114816 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: ent:Ent638_1891 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit complement(2113650..2114816) Serratia proteamaculans 568 5606679 YP_001478162.1 CDS Spro_1931 NC_009832.1 2115133 2115489 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: kpn:KPN_02968 putative helix-turn-helix, AraC type; AraC family transcriptional regulator 2115133..2115489 Serratia proteamaculans 568 5606695 YP_001478163.1 CDS Spro_1932 NC_009832.1 2116416 2118026 D KEGG: lpc:LPC_0954 peptide transport protein; TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor type I/II extracellular region; major facilitator superfamily MFS_1; amino acid/peptide transporter 2116416..2118026 Serratia proteamaculans 568 5605559 YP_001478164.1 CDS Spro_1933 NC_009832.1 2118153 2119094 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: yen:YE2422 putative oxidoreductase; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 2118153..2119094 Serratia proteamaculans 568 5606872 YP_001478165.1 CDS Spro_1934 NC_009832.1 2119181 2119918 D PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: ypi:YpsIP31758_2053 putative phosphoesterase; putative hydrolase 2119181..2119918 Serratia proteamaculans 568 5606873 YP_001478166.1 CDS Spro_1935 NC_009832.1 2119961 2120548 D PFAM: cytoplasmic chaperone TorD family protein; KEGG: eca:ECA2528 hypothetical protein; cytoplasmic chaperone TorD family protein 2119961..2120548 Serratia proteamaculans 568 5606874 YP_001478167.1 CDS Spro_1936 NC_009832.1 2120718 2121371 D PFAM: protein of unknown function DUF533; KEGG: eca:ECA1747 hypothetical protein; hypothetical protein 2120718..2121371 Serratia proteamaculans 568 5606875 YP_001478168.1 CDS Spro_1937 NC_009832.1 2121440 2123473 D PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9A prolyl oligopeptidase domain protein beta-propeller; KEGG: yen:YE1789 oligopeptidase B; oligopeptidase B 2121440..2123473 Serratia proteamaculans 568 5606876 YP_001478169.1 CDS Spro_1938 NC_009832.1 2123508 2124176 R 3'-5' exonuclease activity on single or double-strand DNA; exodeoxyribonuclease X complement(2123508..2124176) Serratia proteamaculans 568 5606877 YP_001478170.1 CDS Spro_1939 NC_009832.1 2124614 2125039 D TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type; KEGG: pap:PSPA7_6338 RNA polymerase-binding protein DksA; TraR/DksA family transcriptional regulator 2124614..2125039 Serratia proteamaculans 568 5606931 YP_001478171.1 CDS Spro_1940 NC_009832.1 2125212 2126165 D KEGG: ypp:YPDSF_1342 proline iminopeptidase; TIGRFAM: proline iminopeptidase; PFAM: alpha/beta hydrolase fold; proline iminopeptidase 2125212..2126165 Serratia proteamaculans 568 5606932 YP_001478172.1 CDS Spro_1941 NC_009832.1 2126347 2126577 R PFAM: DNA polymerase II beta subunit; KEGG: eca:ECA2475 DNA polymerase III, theta subunit; DNA polymerase III subunit theta complement(2126347..2126577) Serratia proteamaculans 568 5606933 YP_001478173.1 CDS Spro_1942 NC_009832.1 2126952 2127470 D PFAM: Ferritin Dps family protein; KEGG: yen:YE1795 ferritin; ferroxidase 2126952..2127470 Serratia proteamaculans 568 5606937 YP_001478174.1 CDS Spro_1943 NC_009832.1 2127794 2128177 D PFAM: copper resistance protein CopC; KEGG: yen:YE1796 putative copper resistance protein; copper resistance protein CopC 2127794..2128177 Serratia proteamaculans 568 5606938 YP_001478175.1 CDS Spro_1944 NC_009832.1 2128181 2129062 D PFAM: copper resistance D domain protein; KEGG: ypi:YpsIP31758_2338 copper resistance protein D; copper resistance D domain-containing protein 2128181..2129062 Serratia proteamaculans 568 5606939 YP_001478176.1 CDS Spro_1945 NC_009832.1 2129132 2129473 D KEGG: yen:YE1798 hypothetical protein; hypothetical protein 2129132..2129473 Serratia proteamaculans 568 5607090 YP_001478177.1 CDS Spro_1946 NC_009832.1 2129873 2130586 D PFAM: GCN5-related N-acetyltransferase; KEGG: kpn:KPN_00583 putative GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase 2129873..2130586 Serratia proteamaculans 568 5607091 YP_001478178.1 CDS Spro_1947 NC_009832.1 2130716 2131282 R KEGG: bpe:BP2072 putative lipoprotein; putative lipoprotein complement(2130716..2131282) Serratia proteamaculans 568 5607092 YP_001478179.1 CDS Spro_1948 NC_009832.1 2131764 2132045 D KEGG: asa:ASA_2363 hypothetical protein; hypothetical protein 2131764..2132045 Serratia proteamaculans 568 5607286 YP_001478180.1 CDS Spro_1949 NC_009832.1 2132265 2133464 D enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity; trans-2-enoyl-CoA reductase 2132265..2133464 Serratia proteamaculans 568 5607287 YP_001478181.1 CDS Spro_1950 NC_009832.1 2133592 2134170 D KEGG: plu:plu3628 hypothetical protein; hypothetical protein 2133592..2134170 Serratia proteamaculans 568 5607288 YP_001478182.1 CDS Spro_1951 NC_009832.1 2134145 2134393 D PFAM: helix-turn-helix domain protein; KEGG: rpe:RPE_4746 transcriptional regulator, XRE family; XRE family transcriptional regulator 2134145..2134393 Serratia proteamaculans 568 5607375 YP_001478183.1 CDS Spro_1952 NC_009832.1 2135016 2135336 D hypothetical protein 2135016..2135336 Serratia proteamaculans 568 5607376 YP_001478184.1 CDS Spro_1953 NC_009832.1 2135379 2135672 D hypothetical protein 2135379..2135672 Serratia proteamaculans 568 5607377 YP_001478185.1 CDS Spro_1954 NC_009832.1 2135715 2136068 D hypothetical protein 2135715..2136068 Serratia proteamaculans 568 5607421 YP_001478186.1 CDS Spro_1955 NC_009832.1 2136104 2137036 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pap:PSPA7_4416 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2136104..2137036) Serratia proteamaculans 568 5607422 YP_001478187.1 CDS Spro_1956 NC_009832.1 2137153 2138250 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pap:PSPA7_4414 aryl-alcohol dehydrogenase (benzyl alcoholdehydrogenase) (badh); alcohol dehydrogenase 2137153..2138250 Serratia proteamaculans 568 5607423 YP_001478188.1 CDS Spro_1957 NC_009832.1 2138271 2138819 D KEGG: pap:PSPA7_4413 hypothetical protein; hypothetical protein 2138271..2138819 Serratia proteamaculans 568 5607448 YP_001478189.1 CDS Spro_1958 NC_009832.1 2138859 2139572 R response regulator in two-component regulatory system with DcuS; phosphorylated DcuR activates transcription of genes involved in anaerobic fumarate respiration; DNA-binding transcriptional activator DcuR complement(2138859..2139572) Serratia proteamaculans 568 5607449 YP_001478190.1 CDS Spro_1959 NC_009832.1 2139576 2141177 R C4-dicarboxylate-sensing histidine kinase; part of two-component regulatory system with DcuR; regulates anaerobic fumarate respiration; sensory histidine kinase DcuS complement(2139576..2141177) Serratia proteamaculans 568 5607074 YP_001478191.1 CDS Spro_1960 NC_009832.1 2141300 2142142 R PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: sme:SMb20498 hypothetical protein; deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase complement(2141300..2142142) Serratia proteamaculans 568 5607075 YP_001478192.1 CDS Spro_1961 NC_009832.1 2142676 2143605 D PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: kpn:KPN_00509 putative periplasmic binding protein; periplasmic binding protein/LacI transcriptional regulator 2142676..2143605 Serratia proteamaculans 568 5607076 YP_001478193.1 CDS Spro_1962 NC_009832.1 2143683 2145167 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: kpn:KPN_00510 putative ABC transporter; ABC transporter-like protein 2143683..2145167 Serratia proteamaculans 568 5607307 YP_001478194.1 CDS Spro_1963 NC_009832.1 2145185 2146213 D PFAM: inner-membrane translocator; KEGG: kpn:KPN_00511 putative bacterial inner-membrane translocator; monosaccharide-transporting ATPase 2145185..2146213 Serratia proteamaculans 568 5607308 YP_001478195.1 CDS Spro_1964 NC_009832.1 2146276 2147193 D PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: hch:HCH_01166 ABC-type sugar transport system, periplasmic component; periplasmic binding protein/LacI transcriptional regulator 2146276..2147193 Serratia proteamaculans 568 5607309 YP_001478196.1 CDS Spro_1965 NC_009832.1 2147339 2149432 D KEGG: mem:Memar_0550 hypothetical protein; hypothetical protein 2147339..2149432 Serratia proteamaculans 568 5603454 YP_001478197.1 CDS Spro_1966 NC_009832.1 2149503 2150318 R TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: spt:SPA0252 putative lipoprotein precursor; YaeC family lipoprotein complement(2149503..2150318) Serratia proteamaculans 568 5603455 YP_001478198.1 CDS Spro_1967 NC_009832.1 2150604 2151122 D KEGG: aba:Acid345_3568 hypothetical protein; hypothetical protein 2150604..2151122 Serratia proteamaculans 568 5603456 YP_001478199.1 CDS Spro_1968 NC_009832.1 2151457 2152848 D PFAM: Di-haem cytochrome c peroxidase; KEGG: stm:STM3820 putative cytochrome c peroxidase; cytochrome-c peroxidase 2151457..2152848 Serratia proteamaculans 568 5603419 YP_001478200.1 CDS Spro_1969 NC_009832.1 2153020 2153445 D PFAM: UspA domain protein; KEGG: ppr:PBPRA0125 putative universal stress protein A; UspA domain-containing protein 2153020..2153445 Serratia proteamaculans 568 5603420 YP_001478201.1 CDS Spro_1970 NC_009832.1 2153496 2155868 R KEGG: vvy:VV2646 putative isomerase; putative glycosyl hydrolase complement(2153496..2155868) Serratia proteamaculans 568 5603421 YP_001478202.1 CDS Spro_1971 NC_009832.1 2155886 2156965 R KEGG: ecs:ECs3961 hypothetical protein; hypothetical protein complement(2155886..2156965) Serratia proteamaculans 568 5603416 YP_001478203.1 CDS Spro_1972 NC_009832.1 2157328 2158308 D PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: ecj:JW3046 DNA-binding transcriptional repressor; DNA-binding transcriptional repressor EbgR 2157328..2158308 Serratia proteamaculans 568 5603417 YP_001478204.1 CDS ebgA NC_009832.1 2158498 2161590 D in Escherichia coli this is the second beta-galactosidase system; cryptic beta-D-galactosidase subunit alpha 2158498..2161590 Serratia proteamaculans 568 5603418 YP_001478205.1 CDS ebgC NC_009832.1 2161587 2162039 D in Escherichia coli this is the second beta-galactosidase system; cryptic beta-D-galactosidase subunit beta 2161587..2162039 Serratia proteamaculans 568 5603376 YP_001478206.1 CDS Spro_1975 NC_009832.1 2162159 2163649 D PFAM: amino acid permease-associated region; KEGG: ecp:ECP_3169 hypothetical transporter YgjI; amino acid permease-associated protein 2162159..2163649 Serratia proteamaculans 568 5603377 YP_001478207.1 CDS Spro_1976 NC_009832.1 2163774 2164088 D PFAM: regulatory protein ArsR; KEGG: rle:RL1168 putative HTH family transcriptional regulator; ArsR family transcriptional regulator 2163774..2164088 Serratia proteamaculans 568 5603378 YP_001478208.1 CDS Spro_1977 NC_009832.1 2164085 2164423 D KEGG: sme:SMc03842 hypothetical protein; hypothetical protein 2164085..2164423 Serratia proteamaculans 568 5603368 YP_001478209.1 CDS clpP NC_009832.1 2164467 2165060 D hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 2164467..2165060 Serratia proteamaculans 568 5603369 YP_001478210.1 CDS Spro_1979 NC_009832.1 2165117 2166508 R KEGG: pen:PSEEN4400 hypothetical protein; hypothetical protein complement(2165117..2166508) Serratia proteamaculans 568 5603370 YP_001478211.1 CDS Spro_1980 NC_009832.1 2166554 2167957 R KEGG: pen:PSEEN4401 hypothetical protein; hypothetical protein complement(2166554..2167957) Serratia proteamaculans 568 5603337 YP_001478212.1 CDS Spro_1981 NC_009832.1 2168023 2169180 R KEGG: sfu:Sfum_1629 hypothetical protein; hypothetical protein complement(2168023..2169180) Serratia proteamaculans 568 5603338 YP_001478213.1 CDS Spro_1982 NC_009832.1 2169368 2170459 R translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD complement(2169368..2170459) Serratia proteamaculans 568 5603339 YP_001478214.1 CDS Spro_1983 NC_009832.1 2170791 2172320 D PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: nis:NIS_1014 sulfate transporter; sulfate transporter 2170791..2172320 Serratia proteamaculans 568 5603311 YP_001478215.1 CDS Spro_1984 NC_009832.1 2172360 2172950 R Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase complement(2172360..2172950) Serratia proteamaculans 568 5603312 YP_001478216.1 CDS Spro_1985 NC_009832.1 2173264 2173542 D YchH; transcription activated by CRP (cyclic AMP receptor protein), a global transcription factor involved in regulation of metabolism in enteric bacteria; ychH presents a class II promoter to bind CRP; unknown function; hypothetical protein 2173264..2173542 Serratia proteamaculans 568 5603255 YP_001478217.1 CDS Spro_1986 NC_009832.1 2173728 2174675 R catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase complement(2173728..2174675) Serratia proteamaculans 568 5603256 YP_001478218.1 CDS Spro_1987 NC_009832.1 2174847 2175713 R KEGG: ypi:YpsIP31758_2069 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase domain protein; 4-diphosphocytidyl-2C-methyl-D-erythritol kinase complement(2174847..2175713) Serratia proteamaculans 568 5603257 YP_001478219.1 CDS lolB NC_009832.1 2175710 2176333 R Incorporates lipoproteins in the outer membrane after they are released by the LolA protein; outer membrane lipoprotein LolB complement(2175710..2176333) Serratia proteamaculans 568 5603229 YP_001478220.1 CDS hemA NC_009832.1 2177050 2178312 D catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 2177050..2178312 Serratia proteamaculans 568 5603230 YP_001478221.1 CDS prfA NC_009832.1 2178346 2179431 D recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 2178346..2179431 Serratia proteamaculans 568 5603231 YP_001478222.1 CDS Spro_1991 NC_009832.1 2179431 2180261 D HemK; PrmC; transfers a methyl group from S-adenosylmethionine to amide nitrogen of specific glutamine residues in protein chain release factors PrfA and PrfB; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 2179431..2180261 Serratia proteamaculans 568 5603184 YP_001478223.1 CDS Spro_1992 NC_009832.1 2180319 2180717 D PFAM: Invasion gene expression up-regulator SirB; KEGG: yen:YE2429 hypothetical protein; invasion gene expression up-regulator SirB 2180319..2180717 Serratia proteamaculans 568 5603185 YP_001478224.1 CDS Spro_1993 NC_009832.1 2180714 2181523 D KEGG: yen:YE2428 hypothetical protein; putative transcriptional regulator 2180714..2181523 Serratia proteamaculans 568 5603186 YP_001478225.1 CDS Spro_1994 NC_009832.1 2181557 2182411 D catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 2181557..2182411 Serratia proteamaculans 568 5603500 YP_001478226.1 CDS Spro_1995 NC_009832.1 2182597 2184285 R putative role in sulfate transport across the inner membrane; member of the SulP family of sulfate transporters; seems to mediate transport via sulfate/proton symport; putative sulfate transporter YchM complement(2182597..2184285) Serratia proteamaculans 568 5603501 YP_001478227.1 CDS Spro_1996 NC_009832.1 2184516 2185001 R PFAM: protein of unknown function DUF336; KEGG: yen:YE1367 hypothetical protein; hypothetical protein complement(2184516..2185001) Serratia proteamaculans 568 5603502 YP_001478228.1 CDS Spro_1997 NC_009832.1 2185202 2186302 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: yen:YE2425 putative inner membrane protein; diguanylate cyclase 2185202..2186302 Serratia proteamaculans 568 5603494 YP_001478229.1 CDS Spro_1998 NC_009832.1 2186335 2189865 R KEGG: yen:YE1709 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; transcription-repair coupling factor complement(2186335..2189865) Serratia proteamaculans 568 5603495 YP_001478230.1 CDS Spro_1999 NC_009832.1 2189969 2190952 R PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: pol:Bpro_3215 pyridoxal-5'-phosphate-dependent enzyme, beta subunit; pyridoxal-5'-phosphate-dependent protein subunit beta complement(2189969..2190952) Serratia proteamaculans 568 5603496 YP_001478231.1 CDS Spro_2000 NC_009832.1 2191027 2191680 D PFAM: YheO domain protein; KEGG: yen:YE3210 hypothetical protein; YheO domain-containing protein 2191027..2191680 Serratia proteamaculans 568 5603661 YP_001478232.1 CDS Spro_2001 NC_009832.1 2191799 2193001 D part of the ATP-dependent transport system LolCDE; responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane; outer membrane-specific lipoprotein transporter subunit LolC 2191799..2193001 Serratia proteamaculans 568 5603662 YP_001478233.1 CDS lolD NC_009832.1 2192994 2193698 D outer membrane specific; part of transporter complex lolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone; lipoprotein transporter ATP-binding subunit 2192994..2193698 Serratia proteamaculans 568 5603663 YP_001478234.1 CDS Spro_2003 NC_009832.1 2193698 2194945 D part of the ATP-dependent transport system LolCDE; responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane; outer membrane-specific lipoprotein transporter subunit LolE 2193698..2194945 Serratia proteamaculans 568 5602692 YP_001478235.1 CDS Spro_2004 NC_009832.1 2195001 2195921 D catalyzes the formation of N-acetyl-D-glucosamine-6-phosphate from N-acetyl-D-glucosamine; N-acetyl-D-glucosamine kinase 2195001..2195921 Serratia proteamaculans 568 5602693 YP_001478236.1 CDS Spro_2005 NC_009832.1 2195933 2196769 D Modulates the activities of several enzymes which are inactive in their acetylated form; NAD-dependent deacetylase 2195933..2196769 Serratia proteamaculans 568 5602694 YP_001478237.1 CDS Spro_2006 NC_009832.1 2196884 2197597 D PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: kpn:KPN_04017 putative sugar isomerase; RpiR family transcriptional regulator 2196884..2197597 Serratia proteamaculans 568 5603457 YP_001478238.1 CDS Spro_2007 NC_009832.1 2197614 2198999 R PFAM: glycoside hydrolase family 4; KEGG: kpn:KPN_04016 putative glycoside hydrolase, family 4; glycoside hydrolase family protein complement(2197614..2198999) Serratia proteamaculans 568 5603458 YP_001478239.1 CDS Spro_2008 NC_009832.1 2199025 2200584 R TIGRFAM: PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system PTS EIIB protein; phosphotransferase system EIIC; KEGG: kpn:KPN_04015 phosphotransferase system PTS; PTS system glucose-like transporter subunit IIB complement(2199025..2200584) Serratia proteamaculans 568 5603459 YP_001478240.1 CDS Spro_2009 NC_009832.1 2200946 2202175 D catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T 2200946..2202175 Serratia proteamaculans 568 5603212 YP_001478241.1 CDS Spro_2010 NC_009832.1 2202261 2203349 D PFAM: Malate/L-lactate dehydrogenase; KEGG: ecv:APECO1_1289 hypothetical oxidoreductase; hypothetical protein 2202261..2203349 Serratia proteamaculans 568 5603213 YP_001478242.1 CDS Spro_2011 NC_009832.1 2203400 2204521 R PFAM: Cupin 4 family protein; SMART: transcription factor jumonji jmjC domain protein; KEGG: yen:YE1716 hypothetical protein; cupin 4 family protein complement(2203400..2204521) Serratia proteamaculans 568 5603983 YP_001478243.1 CDS Spro_2012 NC_009832.1 2204606 2206063 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PhoQ Sensor domain protein; KEGG: yen:YE1717 sensor protein kinase; sensor protein PhoQ complement(2204606..2206063) Serratia proteamaculans 568 5603984 YP_001478244.1 CDS Spro_2013 NC_009832.1 2206069 2206740 R response regulator in two-component regulatory system with PhoQ; involved in magnesium starvation and stress; DNA-binding transcriptional regulator PhoP complement(2206069..2206740) Serratia proteamaculans 568 5603985 YP_001478245.1 CDS Spro_2014 NC_009832.1 2207066 2208346 R PFAM: cytochrome c class I; KEGG: pap:PSPA7_2974 probable cytochrome c precursor; gluconate 2-dehydrogenase complement(2207066..2208346) Serratia proteamaculans 568 5607450 YP_001478246.1 CDS Spro_2015 NC_009832.1 2208365 2210143 R PFAM: glucose-methanol-choline oxidoreductase; KEGG: bxe:Bxe_A4095 putative gluconate dehydrogenase; gluconate 2-dehydrogenase complement(2208365..2210143) Serratia proteamaculans 568 5607451 YP_001478247.1 CDS Spro_2016 NC_009832.1 2210144 2210860 R KEGG: bam:Bamb_3645 hypothetical protein; gluconate 2-dehydrogenase complement(2210144..2210860) Serratia proteamaculans 568 5607452 YP_001478248.1 CDS Spro_2017 NC_009832.1 2211154 2212671 D PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: oan:Oant_4139 putative transcriptional regulator, GntR family; transcriptional regulator 2211154..2212671 Serratia proteamaculans 568 5607466 YP_001478249.1 CDS Spro_2018 NC_009832.1 2212795 2213247 D PFAM: GCN5-related N-acetyltransferase; KEGG: pcr:Pcryo_0836 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase 2212795..2213247 Serratia proteamaculans 568 5607467 YP_001478250.1 CDS Spro_2019 NC_009832.1 2213268 2213969 D PFAM: GCN5-related N-acetyltransferase; KEGG: yen:YE2480 putative acetyltransferase; GCN5-like N-acetyltransferase 2213268..2213969 Serratia proteamaculans 568 5607468 YP_001478251.1 CDS Spro_2020 NC_009832.1 2214021 2215391 R Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase complement(2214021..2215391) Serratia proteamaculans 568 5607456 YP_001478252.1 CDS Spro_2021 NC_009832.1 2215414 2216040 R HflD; UPF0274; in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein; in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis; hypothetical protein complement(2215414..2216040) Serratia proteamaculans 568 5607457 YP_001478253.1 CDS mnmA NC_009832.1 2216043 2217146 R catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA complement(2216043..2217146) Serratia proteamaculans 568 5607458 YP_001478254.1 CDS Spro_2023 NC_009832.1 2217242 2217688 R PFAM: NUDIX hydrolase; KEGG: ypi:YpsIP31758_1613 hydrolase, NUDIX family; NUDIX hydrolase complement(2217242..2217688) Serratia proteamaculans 568 5607430 YP_001478255.1 CDS Spro_2024 NC_009832.1 2217723 2218259 R PFAM: pseudouridine synthase; KEGG: yen:YE1724 putative pseudouridine synthase; pseudouridine synthase complement(2217723..2218259) Serratia proteamaculans 568 5607431 YP_001478256.1 CDS Spro_2025 NC_009832.1 2218482 2219735 D Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase 2218482..2219735 Serratia proteamaculans 568 5607432 YP_001478257.1 CDS Spro_2026 NC_009832.1 2220061 2220918 D hypothetical protein 2220061..2220918 Serratia proteamaculans 568 5607398 YP_001478258.1 CDS Spro_2027 NC_009832.1 2221222 2222529 D KEGG: ava:Ava_2063 hypothetical protein; hypothetical protein 2221222..2222529 Serratia proteamaculans 568 5607399 YP_001478259.1 CDS Spro_2028 NC_009832.1 2223258 2224040 R PFAM: integrase family protein; KEGG: ecj:JW1126 predicted integrase; integrase family protein complement(2223258..2224040) Serratia proteamaculans 568 5607400 YP_001478260.1 CDS Spro_2029 NC_009832.1 2224111 2224389 D PFAM: transposase IS3/IS911 family protein; KEGG: psa:PST_3402 ISxac3 transposase; transposase IS3/IS911 family protein 2224111..2224389 Serratia proteamaculans 568 5607339 YP_001478261.1 CDS Spro_2030 NC_009832.1 2224410 2225261 D PFAM: Integrase catalytic region; KEGG: psa:PST_1859 transposase, IS3 family; Integrase catalytic subunit 2224410..2225261 Serratia proteamaculans 568 5607340 YP_001478262.1 CDS Spro_2031 NC_009832.1 2225496 2226161 R hypothetical protein complement(2225496..2226161) Serratia proteamaculans 568 5607341 YP_001478263.1 CDS Spro_2032 NC_009832.1 2226145 2226987 R KEGG: ent:Ent638_2623 hypothetical protein; hypothetical protein complement(2226145..2226987) Serratia proteamaculans 568 5607310 YP_001478264.1 CDS Spro_2033 NC_009832.1 2229342 2230190 R KEGG: sit:TM1040_1659 hypothetical protein; hypothetical protein complement(2229342..2230190) Serratia proteamaculans 568 5607311 YP_001478265.1 CDS Spro_2034 NC_009832.1 2230635 2231279 R PFAM: peptidase S24 and S26 domain protein; KEGG: ent:Ent638_2620 putative phage repressor; putative phage repressor complement(2230635..2231279) Serratia proteamaculans 568 5607312 YP_001478266.1 CDS Spro_2035 NC_009832.1 2231371 2231598 D KEGG: plu:plu3476 hypothetical protein; hypothetical protein 2231371..2231598 Serratia proteamaculans 568 5607283 YP_001478267.1 CDS Spro_2036 NC_009832.1 2231614 2231901 D KEGG: sec:SC0986 Gifsy-2 prophage lysozyme; Phage-related lysozyme (muraminidase)-like protein 2231614..2231901 Serratia proteamaculans 568 5607284 YP_001478268.1 CDS Spro_2037 NC_009832.1 2231898 2232281 D hypothetical protein 2231898..2232281 Serratia proteamaculans 568 5607285 YP_001478269.1 CDS Spro_2038 NC_009832.1 2232949 2233230 D hypothetical protein 2232949..2233230 Serratia proteamaculans 568 5607239 YP_001478270.1 CDS Spro_2039 NC_009832.1 2233913 2234320 D hypothetical protein 2233913..2234320 Serratia proteamaculans 568 5607240 YP_001478271.1 CDS Spro_2040 NC_009832.1 2234415 2234675 D PFAM: DNA polymerase II beta subunit; KEGG: plu:plu2690 DNA polymerase III, theta subunit; DNA polymerase II subunit beta 2234415..2234675 Serratia proteamaculans 568 5607241 YP_001478272.1 CDS Spro_2041 NC_009832.1 2235519 2236073 D PFAM: DNA packaging Nu1; KEGG: ssn:SSON_2431 bacteriophage DNA packaging protein; DNA packaging Nu1 2235519..2236073 Serratia proteamaculans 568 5607167 YP_001478273.1 CDS Spro_2042 NC_009832.1 2236048 2237973 D PFAM: terminase GpA; KEGG: ecs:ECs1630 terminase large subunit; terminase GpA 2236048..2237973 Serratia proteamaculans 568 5607168 YP_001478274.1 CDS Spro_2043 NC_009832.1 2238059 2238805 D KEGG: tcx:Tcr_0695 phage tail sheath protein; Phage tail sheath protein FI-like protein 2238059..2238805 Serratia proteamaculans 568 5607169 YP_001478275.1 CDS Spro_2044 NC_009832.1 2238805 2239263 D PFAM: P2 GpU family protein; KEGG: syf:Synpcc7942_0751 hypothetical protein; P2 GpU family protein 2238805..2239263 Serratia proteamaculans 568 5607165 YP_001478276.1 CDS Spro_2045 NC_009832.1 2239457 2240578 D PFAM: late control D family protein; KEGG: sdy:SDY_1080 hypothetical protein; late control D family protein 2239457..2240578 Serratia proteamaculans 568 5607166 YP_001478277.1 CDS Spro_2046 NC_009832.1 2240666 2241127 R PFAM: regulatory protein AsnC/Lrp family; KEGG: ent:Ent638_0915 putative transcriptional regulator, AsnC family; AsnC family transcriptional regulator complement(2240666..2241127) Serratia proteamaculans 568 5607152 YP_001478278.1 CDS Spro_2047 NC_009832.1 2241244 2242188 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: stt:t1016 putative membrane protein; hypothetical protein 2241244..2242188 Serratia proteamaculans 568 5607153 YP_001478279.1 CDS Spro_2048 NC_009832.1 2243010 2243162 D KEGG: yen:YE1725 isocitrate dehydrogenase; isocitrate dehydrogenase 2243010..2243162 Serratia proteamaculans 568 5607154 YP_001478280.1 CDS Spro_2049 NC_009832.1 2243251 2243691 D KEGG: kpn:KPN_00743 cell envelope integrity inner membrane protein TolA; colicin uptake-like protein 2243251..2243691 Serratia proteamaculans 568 5607105 YP_001478281.1 CDS Spro_2050 NC_009832.1 2243817 2244938 R PFAM: protein of unknown function UPF0118; KEGG: eca:ECA0120 hypothetical protein; hypothetical protein complement(2243817..2244938) Serratia proteamaculans 568 5607106 YP_001478282.1 CDS Spro_2051 NC_009832.1 2245208 2245426 R TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-oxalocrotonate tautomerase; KEGG: pen:PSEEN1931 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase complement(2245208..2245426) Serratia proteamaculans 568 5607107 YP_001478283.1 CDS Spro_2052 NC_009832.1 2245444 2246190 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pol:Bpro_3414 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(2245444..2246190) Serratia proteamaculans 568 5607093 YP_001478284.1 CDS Spro_2053 NC_009832.1 2246509 2247546 D PFAM: regulatory protein LacI; KEGG: kpn:KPN_01795 putative periplasmic binding protein/LacI transcriptional regulator; LacI family transcription regulator 2246509..2247546 Serratia proteamaculans 568 5607094 YP_001478285.1 CDS Spro_2054 NC_009832.1 2247752 2248678 D PFAM: Xylose isomerase domain protein TIM barrel; KEGG: kpn:KPN_01796 putative epimerase/isomerase; xylose isomerase domain-containing protein 2247752..2248678 Serratia proteamaculans 568 5607095 YP_001478286.1 CDS Spro_2055 NC_009832.1 2248693 2249865 D PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: kpn:KPN_01797 hypothetical oxidoreductase; oxidoreductase domain-containing protein 2248693..2249865 Serratia proteamaculans 568 5607053 YP_001478287.1 CDS Spro_2056 NC_009832.1 2249893 2250243 R PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: swi:Swit_2158 glutathione-dependent formaldehyde-activating, GFA; glutathione-dependent formaldehyde-activating protein complement(2249893..2250243) Serratia proteamaculans 568 5607054 YP_001478288.1 CDS Spro_2057 NC_009832.1 2250418 2250627 D hypothetical protein 2250418..2250627 Serratia proteamaculans 568 5607055 YP_001478289.1 CDS Spro_2058 NC_009832.1 2250962 2251705 D PFAM: Domain of unknown function DUF1835; KEGG: bat:BAS2610 hypothetical protein; hypothetical protein 2250962..2251705 Serratia proteamaculans 568 5606950 YP_001478290.1 CDS Spro_2059 NC_009832.1 2251832 2252476 D PFAM: pentapeptide repeat protein; KEGG: ppr:PBPRB0125 hypothetical protein; pentapeptide repeat-containing protein 2251832..2252476 Serratia proteamaculans 568 5606951 YP_001478291.1 CDS Spro_2060 NC_009832.1 2252509 2252907 R hypothetical protein complement(2252509..2252907) Serratia proteamaculans 568 5606952 YP_001478292.1 CDS Spro_2061 NC_009832.1 2253352 2253564 D PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: eca:ECA2471 cold shock protein; cold-shock DNA-binding domain-containing protein 2253352..2253564 Serratia proteamaculans 568 5606899 YP_001478293.1 CDS Spro_2062 NC_009832.1 2253968 2254648 R PFAM: isochorismatase hydrolase; KEGG: bbr:BB1080 putative isochorismatase; isochorismatase hydrolase complement(2253968..2254648) Serratia proteamaculans 568 5606900 YP_001478294.1 CDS Spro_2063 NC_009832.1 2255097 2255852 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: vco:VC0395_A1193 oxidoreductase, short-chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR 2255097..2255852 Serratia proteamaculans 568 5606901 YP_001478295.1 CDS Spro_2064 NC_009832.1 2255900 2257180 R PFAM: FAD dependent oxidoreductase; KEGG: kpn:KPN_01017 probable oxidoreductase; FAD dependent oxidoreductase complement(2255900..2257180) Serratia proteamaculans 568 5606737 YP_001478296.1 CDS Spro_2065 NC_009832.1 2257192 2258688 R catalyzes the formation of gamma-glutamyl-gamma-aminobutyrate from Gamma-glutamyl-gamma-aminobutyraldehyde; involved in putrescine degradation; gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase complement(2257192..2258688) Serratia proteamaculans 568 5606738 YP_001478297.1 CDS Spro_2066 NC_009832.1 2258704 2259261 R regulates genes involved in putrescine degradation; DNA-binding transcriptional repressor PuuR complement(2258704..2259261) Serratia proteamaculans 568 5606739 YP_001478298.1 CDS puuD NC_009832.1 2259258 2260019 R catalyzes the degradation of gamma-glutamyl-gamma-aminobutyrate into glutamate and gamma-aminobutyrate; gamma-glutamyl-gamma-aminobutyrate hydrolase complement(2259258..2260019) Serratia proteamaculans 568 5606686 YP_001478299.1 CDS Spro_2068 NC_009832.1 2260259 2261677 D PFAM: glutamine synthetase catalytic region; KEGG: ecs:ECs1874 putative glutamine synthetase; glutamate--putrescine ligase 2260259..2261677 Serratia proteamaculans 568 5606687 YP_001478300.1 CDS Spro_2069 NC_009832.1 2261995 2263365 D PFAM: amino acid permease-associated region; KEGG: kpn:KPN_01022 putative amino acid/amine transport protein; amino acid permease-associated protein 2261995..2263365 Serratia proteamaculans 568 5606688 YP_001478301.1 CDS Spro_2070 NC_009832.1 2263457 2264350 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: ent:Ent638_2056 protein of unknown function DUF6, transmembrane; hypothetical protein 2263457..2264350 Serratia proteamaculans 568 5606659 YP_001478302.1 CDS Spro_2071 NC_009832.1 2264423 2264695 D hypothetical protein 2264423..2264695 Serratia proteamaculans 568 5606660 YP_001478303.1 CDS Spro_2072 NC_009832.1 2265092 2265973 D PFAM: nucleoside-specific channel-forming protein Tsx; KEGG: ecv:APECO1_1599 nucleoside-specific channel-forming protein Tsx; nucleoside-specific channel-forming protein Tsx 2265092..2265973 Serratia proteamaculans 568 5606661 YP_001478304.1 CDS Spro_2073 NC_009832.1 2266669 2267145 D KEGG: kpn:KPN_02024 hypothetical protein; hypothetical protein 2266669..2267145 Serratia proteamaculans 568 5606622 YP_001478305.1 CDS Spro_2074 NC_009832.1 2267259 2267789 D catalyzes the interconversion of chorismate to prephenate; chorismate mutase 2267259..2267789 Serratia proteamaculans 568 5606623 YP_001478306.1 CDS Spro_2075 NC_009832.1 2267799 2269334 R PFAM: beta-lactamase; KEGG: oan:Oant_3736 beta-lactamase; beta-lactamase complement(2267799..2269334) Serratia proteamaculans 568 5606624 YP_001478307.1 CDS Spro_2076 NC_009832.1 2269606 2270409 R PFAM: N-formylglutamate amidohydrolase; KEGG: yen:YE2462 putative N-formylglutamate amidohydrolase; N-formylglutamate amidohydrolase complement(2269606..2270409) Serratia proteamaculans 568 5606596 YP_001478308.1 CDS Spro_2077 NC_009832.1 2270406 2271629 R catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway; imidazolonepropionase complement(2270406..2271629) Serratia proteamaculans 568 5606597 YP_001478309.1 CDS Spro_2078 NC_009832.1 2271788 2272543 R TIGRFAM: histidine utilization repressor; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: yen:YE2460 putative GntR-family transcriptional regulatory protein; histidine utilization repressor complement(2271788..2272543) Serratia proteamaculans 568 5606598 YP_001478310.1 CDS Spro_2079 NC_009832.1 2272721 2274091 D catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glutamate; N-formimino-L-glutamate deiminase 2272721..2274091 Serratia proteamaculans 568 5606586 YP_001478311.1 CDS Spro_2080 NC_009832.1 2274091 2274654 D PFAM: protein of unknown function DUF886; KEGG: yen:YE2458 hypothetical protein; hypothetical protein 2274091..2274654 Serratia proteamaculans 568 5606587 YP_001478312.1 CDS Spro_2081 NC_009832.1 2274722 2275723 D PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: kpn:KPN_03263 putative bacterial regulatory protein, LacI; LacI family transcription regulator 2274722..2275723 Serratia proteamaculans 568 5606551 YP_001478313.1 CDS Spro_2082 NC_009832.1 2275960 2277402 R KEGG: sdy:SDY_2558 sucrose hydrolase; TIGRFAM: sucrose-6-phosphate hydrolase; PFAM: Glycosyl hydrolase family 32 domain protein; SMART: glycoside hydrolase family 32; sucrose-6-phosphate hydrolase complement(2275960..2277402) Serratia proteamaculans 568 5606552 YP_001478314.1 CDS lacY NC_009832.1 2277399 2278658 R lactose/proton symporter; mediates lactose/proton symport through the membrane by utilizing the proton gradient to drive transport of galactosides; member of major facilitator superfamily; functions as a monomer with 12 transmembrane segments; galactoside permease complement(2277399..2278658) Serratia proteamaculans 568 5606553 YP_001478315.1 CDS Spro_2084 NC_009832.1 2278832 2280142 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: ent:Ent638_0364 major facilitator superfamily MFS_1; major facilitator transporter complement(2278832..2280142) Serratia proteamaculans 568 5606533 YP_001478316.1 CDS Spro_2085 NC_009832.1 2280275 2281573 R PFAM: cytochrome c class I; KEGG: yen:YE1086 putative cytochrome c; gluconate 2-dehydrogenase complement(2280275..2281573) Serratia proteamaculans 568 5606534 YP_001478317.1 CDS Spro_2086 NC_009832.1 2281570 2283186 R PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; KEGG: har:HEAR2557 glucose dehydrogenase; glucose-methanol-choline oxidoreductase complement(2281570..2283186) Serratia proteamaculans 568 5606535 YP_001478318.1 CDS Spro_2087 NC_009832.1 2283179 2283700 R KEGG: pfo:Pfl_4264 twin-arginine translocation pathway signal; twin-arginine translocation pathway signal complement(2283179..2283700) Serratia proteamaculans 568 5606530 YP_001478319.1 CDS Spro_2088 NC_009832.1 2283735 2284271 R PFAM: protein of unknown function DUF336; KEGG: pmy:Pmen_0200 protein of unknown function DUF336; hypothetical protein complement(2283735..2284271) Serratia proteamaculans 568 5606531 YP_001478320.1 CDS Spro_2089 NC_009832.1 2284343 2285230 R PFAM: 6-phosphogluconate dehydrogenase NAD-binding; Phosphogluconate dehydrogenase, NAD-binding, putative-like; KEGG: kpn:KPN_04046 putative dehydrogenase; phosphogluconate dehydrogenase, NAD-binding-like protein complement(2284343..2285230) Serratia proteamaculans 568 5606532 YP_001478321.1 CDS Spro_2090 NC_009832.1 2285244 2286335 R PFAM: protein of unknown function DUF453; KEGG: kpn:KPN_04047 hypothetical protein; hypothetical protein complement(2285244..2286335) Serratia proteamaculans 568 5606505 YP_001478322.1 CDS Spro_2091 NC_009832.1 2286337 2287050 R TIGRFAM: 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase; PFAM: Dimethylmenaquinone methyltransferase; KEGG: ppf:Pput_3204 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase; hypothetical protein complement(2286337..2287050) Serratia proteamaculans 568 5606506 YP_001478323.1 CDS Spro_2092 NC_009832.1 2287047 2287790 R PFAM: LmbE family protein; KEGG: ppf:Pput_1362 LmbE family protein; LmbE family protein complement(2287047..2287790) Serratia proteamaculans 568 5606507 YP_001478324.1 CDS Spro_2093 NC_009832.1 2287916 2289142 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ppu:PP_2516 transcriptional regulator, LysR family; LysR family transcriptional regulator 2287916..2289142 Serratia proteamaculans 568 5606484 YP_001478325.1 CDS Spro_2094 NC_009832.1 2289146 2289574 R KEGG: pen:PSEEN2021 3-dehydroquinate dehydratase, type II; TIGRFAM: 3-dehydroquinate dehydratase, type II; PFAM: dehydroquinase class II; 3-dehydroquinate dehydratase complement(2289146..2289574) Serratia proteamaculans 568 5606485 YP_001478326.1 CDS Spro_2095 NC_009832.1 2289577 2290416 R PFAM: amidohydrolase 2; KEGG: ppf:Pput_2198 amidohydrolase 2; amidohydrolase 2 complement(2289577..2290416) Serratia proteamaculans 568 5606486 YP_001478327.1 CDS Spro_2096 NC_009832.1 2290413 2291675 R extradiol catechol dioxygenase that catalyzes the oxidative cleavage of substituted catechols; part of the bacterial aromatic compound degradation pathway; protocatechuate 4,5-dioxygenase complement(2290413..2291675) Serratia proteamaculans 568 5606473 YP_001478328.1 CDS Spro_2097 NC_009832.1 2291700 2293079 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: kpn:KPN_04052 putative general substrate transporter; major facilitator transporter complement(2291700..2293079) Serratia proteamaculans 568 5606474 YP_001478329.1 CDS Spro_2098 NC_009832.1 2293423 2295042 R PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase complement(2293423..2295042) Serratia proteamaculans 568 5606475 YP_001478330.1 CDS Spro_2099 NC_009832.1 2295530 2296873 D PFAM: Citrate carrier protein; KEGG: yen:YE2507 putative citrate/sodium-family symporter; citrate carrier protein 2295530..2296873 Serratia proteamaculans 568 5606452 YP_001478331.1 CDS Spro_2100 NC_009832.1 2297090 2297221 D hypothetical protein 2297090..2297221 Serratia proteamaculans 568 5606453 YP_001478332.1 CDS Spro_2101 NC_009832.1 2297372 2297581 R hypothetical protein complement(2297372..2297581) Serratia proteamaculans 568 5606454 YP_001478333.1 CDS Spro_2102 NC_009832.1 2297747 2297911 D hypothetical protein 2297747..2297911 Serratia proteamaculans 568 5606366 YP_001478334.1 CDS Spro_2103 NC_009832.1 2298101 2298208 R hypothetical protein complement(2298101..2298208) Serratia proteamaculans 568 5606367 YP_001478335.1 CDS Spro_2104 NC_009832.1 2298537 2298929 D PFAM: protein of unknown function DUF437; KEGG: yen:YE1853 hypothetical protein; hypothetical protein 2298537..2298929 Serratia proteamaculans 568 5606368 YP_001478336.1 CDS Spro_2105 NC_009832.1 2298931 2299533 D KEGG: rle:RL2800 hypothetical protein; hypothetical protein 2298931..2299533 Serratia proteamaculans 568 5606363 YP_001478337.1 CDS Spro_2106 NC_009832.1 2299589 2299828 R PFAM: protein of unknown function DUF1480; KEGG: ypi:YpsIP31758_1660 hypothetical protein; hypothetical protein complement(2299589..2299828) Serratia proteamaculans 568 5606364 YP_001478338.1 CDS Spro_2107 NC_009832.1 2299966 2300898 R PFAM: Spore coat U domain protein; KEGG: yen:YE1856 hypothetical protein; spore coat U domain-containing protein complement(2299966..2300898) Serratia proteamaculans 568 5606365 YP_001478339.1 CDS Spro_2108 NC_009832.1 2300917 2303265 R PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: yen:YE1857 probable outer membrane usher protein; fimbrial biogenesis outer membrane usher protein complement(2300917..2303265) Serratia proteamaculans 568 5606280 YP_001478340.1 CDS Spro_2109 NC_009832.1 2303417 2304181 R KEGG: yen:YE1858 putative chaperone protein; putative chaperone protein complement(2303417..2304181) Serratia proteamaculans 568 5606281 YP_001478341.1 CDS Spro_2110 NC_009832.1 2304205 2304759 R PFAM: Spore coat U domain protein; KEGG: yen:YE1859 hypothetical protein; spore coat U domain-containing protein complement(2304205..2304759) Serratia proteamaculans 568 5606282 YP_001478342.1 CDS Spro_2111 NC_009832.1 2304759 2305262 R PFAM: Spore coat U domain protein; KEGG: yps:YPTB2382 hypothetical protein; spore coat U domain-containing protein complement(2304759..2305262) Serratia proteamaculans 568 5606267 YP_001478343.1 CDS Spro_2112 NC_009832.1 2305265 2305804 R PFAM: Spore coat U domain protein; KEGG: yen:YE1861 hypothetical protein; spore coat U domain-containing protein complement(2305265..2305804) Serratia proteamaculans 568 5606268 YP_001478344.1 CDS yebU NC_009832.1 2306082 2307593 R in Escherichia coli this enzyme specifically methylates C1407 of the 16S rRNA; rRNA (cytosine-C(5)-)-methyltransferase RsmF complement(2306082..2307593) Serratia proteamaculans 568 5606269 YP_001478345.1 CDS Spro_2116 NC_009832.1 2310221 2311471 R TIGRFAM: integral membrane protein, PqiA family; PFAM: Paraquat-inducible protein A; KEGG: yen:YE1865 hypothetical protein; PqiA family integral membrane protein complement(2310221..2311471) Serratia proteamaculans 568 5606158 YP_001478346.1 CDS Spro_2117 NC_009832.1 2311715 2312212 D PFAM: GAF domain protein; KEGG: ypi:YpsIP31758_1670 hypothetical protein; putative GAF sensor protein 2311715..2312212 Serratia proteamaculans 568 5606135 YP_001478347.1 CDS Spro_2118 NC_009832.1 2312308 2313018 D affects solute and DNA transport through an unknown mechanism; putative solute/DNA competence effector 2312308..2313018 Serratia proteamaculans 568 5606136 YP_001478348.1 CDS Spro_2119 NC_009832.1 2313038 2315074 D Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; carboxy-terminal protease 2313038..2315074 Serratia proteamaculans 568 5606137 YP_001478349.1 CDS Spro_2120 NC_009832.1 2315375 2316253 D putative metalloprotease; heat shock protein HtpX 2315375..2316253 Serratia proteamaculans 568 5606132 YP_001478350.1 CDS Spro_2121 NC_009832.1 2316302 2317744 R PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE1875 putative transport protein; major facilitator transporter complement(2316302..2317744) Serratia proteamaculans 568 5606133 YP_001478351.1 CDS Spro_2122 NC_009832.1 2317924 2318715 D PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: yen:YE1877 IclR-family transcriptional regulatory protein; IclR family transcriptional regulator 2317924..2318715 Serratia proteamaculans 568 5606134 YP_001478352.1 CDS Spro_2123 NC_009832.1 2318847 2320238 R PFAM: sodium:dicarboxylate symporter; KEGG: yen:YE1879 putative transport protein; sodium:dicarboxylate symporter complement(2318847..2320238) Serratia proteamaculans 568 5606127 YP_001478353.1 CDS Spro_2124 NC_009832.1 2320423 2320971 R PFAM: membrane-bound metal-dependent hydrolase; KEGG: yen:YE1880 hypothetical protein; hypothetical protein complement(2320423..2320971) Serratia proteamaculans 568 5606128 YP_001478354.1 CDS Spro_2125 NC_009832.1 2321367 2322032 R YniC; catalyzes the dephosphorylation of 2-deoxyglucose 6-phosphate, mannose 6-phosphate and p-nitrophenyl phosphate; 2-deoxyglucose-6-phosphatase complement(2321367..2322032) Serratia proteamaculans 568 5606129 YP_001478355.1 CDS Spro_2126 NC_009832.1 2322098 2323384 R KEGG: xau:Xaut_4145 conserved hypothetical membrane-bound protease; membrane-bound protease complement(2322098..2323384) Serratia proteamaculans 568 5606121 YP_001478356.1 CDS Spro_2127 NC_009832.1 2323580 2324140 D KEGG: yen:YE1891 putative yfeABCD locus regulator; putative yfeABCD locus regulator 2323580..2324140 Serratia proteamaculans 568 5606122 YP_001478357.1 CDS Spro_2128 NC_009832.1 2324181 2325050 R PFAM: aminoglycoside phosphotransferase; fructosamine kinase; KEGG: yen:YE1896 hypothetical protein; fructosamine kinase complement(2324181..2325050) Serratia proteamaculans 568 5606123 YP_001478358.1 CDS Spro_2129 NC_009832.1 2325315 2325764 D PFAM: GCN5-related N-acetyltransferase; KEGG: plu:plu3509 hypothetical protein; GCN5-like N-acetyltransferase 2325315..2325764 Serratia proteamaculans 568 5606106 YP_001478359.1 CDS Spro_2130 NC_009832.1 2325802 2326662 R PFAM: ABC-3 protein; KEGG: yen:YE1897 chelated iron transport system membrane protein; ABC-3 protein complement(2325802..2326662) Serratia proteamaculans 568 5606107 YP_001478360.1 CDS Spro_2131 NC_009832.1 2326662 2327522 R PFAM: transport system permease protein; ABC-3 protein; KEGG: ypi:YpsIP31758_1703 chelated iron ABC transporter, permease protein YfeC; ABC-3 protein complement(2326662..2327522) Serratia proteamaculans 568 5606108 YP_001478361.1 CDS Spro_2132 NC_009832.1 2327522 2328412 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: yen:YE1899 ATP-binding transport protein; ABC transporter-like protein complement(2327522..2328412) Serratia proteamaculans 568 5606097 YP_001478362.1 CDS Spro_2133 NC_009832.1 2328409 2329353 R PFAM: periplasmic solute binding protein; KEGG: eca:ECA2392 periplasmic chelated iron-binding protein; periplasmic solute binding protein complement(2328409..2329353) Serratia proteamaculans 568 5606098 YP_001478363.1 CDS Spro_2134 NC_009832.1 2329485 2329784 R KEGG: kpn:KPN_02184 hypothetical protein; hypothetical protein complement(2329485..2329784) Serratia proteamaculans 568 5606099 YP_001478364.1 CDS Spro_2135 NC_009832.1 2329858 2330559 D PFAM: Lytic transglycosylase catalytic; KEGG: yps:YPTB2346 putative membrane-bound lytic murein transglycosylase; lytic transglycosylase 2329858..2330559 Serratia proteamaculans 568 5606027 YP_001478365.1 CDS Spro_2136 NC_009832.1 2330857 2331594 D KEGG: kpn:KPN_02084 hypothetical protein; gluconate 2-dehydrogenase 2330857..2331594 Serratia proteamaculans 568 5606028 YP_001478366.1 CDS Spro_2137 NC_009832.1 2331597 2333378 D PFAM: glucose-methanol-choline oxidoreductase; KEGG: kpn:KPN_02083 monooxygenase, FAD-binding; glucose-methanol-choline oxidoreductase; gluconate 2-dehydrogenase 2331597..2333378 Serratia proteamaculans 568 5606029 YP_001478367.1 CDS Spro_2138 NC_009832.1 2333391 2334710 D PFAM: cytochrome c class I; KEGG: kpn:KPN_02082 gluconate dehydrogenase cytochrome c subunit, putative; gluconate 2-dehydrogenase 2333391..2334710 Serratia proteamaculans 568 5606024 YP_001478368.1 CDS Spro_2139 NC_009832.1 2334971 2336254 D KEGG: asa:ASA_3891 serine transporter; serine transporter 2334971..2336254 Serratia proteamaculans 568 5606025 YP_001478369.1 CDS Spro_2140 NC_009832.1 2336347 2337531 D PFAM: periplasmic binding protein; KEGG: eca:ECA3241 ABC transporter, substrate binding protein; periplasmic binding protein 2336347..2337531 Serratia proteamaculans 568 5606026 YP_001478370.1 CDS Spro_2141 NC_009832.1 2337567 2338256 R protein involved in resistance to different drugs (tetracycline, chloramphenicol, beta-lactams, and quinolones); part of the multiple antibiotic resistance (mar) locus, which is composed by the genes marC and marRAB; unknown function; multiple drug resistance protein MarC complement(2337567..2338256) Serratia proteamaculans 568 5605967 YP_001478371.1 CDS Spro_2142 NC_009832.1 2338384 2338743 R hypothetical protein complement(2338384..2338743) Serratia proteamaculans 568 5605968 YP_001478372.1 CDS Spro_2143 NC_009832.1 2338892 2339518 D KEGG: plu:plu2637 hypothetical protein; hypothetical protein 2338892..2339518 Serratia proteamaculans 568 5605969 YP_001478373.1 CDS Spro_2144 NC_009832.1 2339740 2341668 D catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; threonyl-tRNA synthetase 2339740..2341668 Serratia proteamaculans 568 5605934 YP_001478374.1 CDS Spro_2145 NC_009832.1 2341873 2342223 D IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 2341873..2342223 Serratia proteamaculans 568 5605935 YP_001478375.1 CDS rpmI NC_009832.1 2342322 2342519 D PFAM: ribosomal protein L35; KEGG: yen:YE1914 50S ribosomal protein L35; 50S ribosomal protein L35 2342322..2342519 Serratia proteamaculans 568 5605936 YP_001478376.1 CDS Spro_2147 NC_009832.1 2342563 2342919 D TIGRFAM: ribosomal protein L20; KEGG: ypi:YpsIP31758_1715 ribosomal protein L20; 50S ribosomal protein L20 2342563..2342919 Serratia proteamaculans 568 5605923 YP_001478377.1 CDS pheS NC_009832.1 2343281 2344264 D catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 2343281..2344264 Serratia proteamaculans 568 5605924 YP_001478378.1 CDS pheT NC_009832.1 2344279 2346666 D catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 2344279..2346666 Serratia proteamaculans 568 5605925 YP_001478379.1 CDS ihfA NC_009832.1 2346671 2346967 D This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit alpha 2346671..2346967 Serratia proteamaculans 568 5605913 YP_001478380.1 CDS Spro_2151 NC_009832.1 2347370 2348377 D with BtuD and BtuF transports vitamin B12 into the cell; vtamin B12-transporter permease 2347370..2348377 Serratia proteamaculans 568 5605914 YP_001478381.1 CDS btuE NC_009832.1 2348419 2348970 D similar to glutathione peroxidase; member of the btuCED operon which is required for vitamin B12 transport across the inner membrane; putative glutathione peroxidase 2348419..2348970 Serratia proteamaculans 568 5605910 YP_001478382.1 CDS Spro_2153 NC_009832.1 2348996 2349751 D ATP-binding protein that acts with the transmembrane protein BtuC and the solute binding protein BtuF to transport vitamin B12 into the cell; vitamin B12-transporter ATPase 2348996..2349751 Serratia proteamaculans 568 5605911 YP_001478383.1 CDS Spro_2154 NC_009832.1 2350152 2351306 D catalyzes the conversion of UDP-4-keto-arabinose to UDP-4-amino-4-deoxy-L-arabinose; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 2350152..2351306 Serratia proteamaculans 568 5605912 YP_001478384.1 CDS Spro_2155 NC_009832.1 2351293 2352273 D catalyzes the transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate; undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase 2351293..2352273 Serratia proteamaculans 568 5605901 YP_001478385.1 CDS Spro_2156 NC_009832.1 2352273 2354255 D Bifunctional polymyxin resistance arnA protein; catalyzes the decarboxylation of UDP-glucuronic acid to UDP-4-keto-arabinose and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose to form UDP-L-4-formamido-arabinose; active in certain mutant strains; bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase 2352273..2354255 Serratia proteamaculans 568 5605902 YP_001478386.1 CDS Spro_2157 NC_009832.1 2354252 2355157 D PFAM: polysaccharide deacetylase; KEGG: yen:YE2189 hypothetical protein; polysaccharide deacetylase 2354252..2355157 Serratia proteamaculans 568 5605903 YP_001478387.1 CDS arnT NC_009832.1 2355154 2356821 D catalyzes the addition of 4-amino-4-deoxy-L-arabinose to lipid A; 4-amino-4-deoxy-L-arabinose transferase 2355154..2356821 Serratia proteamaculans 568 5605898 YP_001478388.1 CDS Spro_2159 NC_009832.1 2356818 2357165 D KEGG: yen:YE2187 hypothetical protein; hypothetical protein 2356818..2357165 Serratia proteamaculans 568 5605899 YP_001478389.1 CDS Spro_2160 NC_009832.1 2357162 2357554 D KEGG: ypi:YpsIP31758_1731 hypothetical protein; hypothetical protein 2357162..2357554 Serratia proteamaculans 568 5605900 YP_001478390.1 CDS Spro_2161 NC_009832.1 2357728 2358192 D PFAM: NLP/P60 protein; KEGG: yen:YE2185 putative lipoprotein; NLP/P60 protein 2357728..2358192 Serratia proteamaculans 568 5605880 YP_001478391.1 CDS lplA NC_009832.1 2358250 2359263 D Catalyzes both the ATP-dependent activation of exogenously supplied lipoate to lipoyl-AMP and the transfer of the activated lipoyl on the lipoate-dependent enzymes. Creates an amide linkage that joins the free carboxyl group of lipoic acid to the epsilon-amino group of a specific lysine residue in lipoyl domain of apoproteins; lipoate-protein ligase A 2358250..2359263 Serratia proteamaculans 568 5605881 YP_001478392.1 CDS Spro_2163 NC_009832.1 2359817 2360554 D PFAM: EAL domain protein; KEGG: eca:ECA1841 hypothetical protein; diguanylate phosphodiesterase 2359817..2360554 Serratia proteamaculans 568 5605882 YP_001478393.1 CDS Spro_2164 NC_009832.1 2360809 2362251 D PFAM: protein of unknown function UPF0061; KEGG: ypi:YpsIP31758_1734 hypothetical protein; hypothetical protein 2360809..2362251 Serratia proteamaculans 568 5605860 YP_001478394.1 CDS hmuV NC_009832.1 2362300 2363085 R with HmuTU is involved in the transport of hemin; hemin importer ATP-binding subunit complement(2362300..2363085) Serratia proteamaculans 568 5605861 YP_001478395.1 CDS Spro_2166 NC_009832.1 2363078 2364082 R PFAM: transport system permease protein; KEGG: yen:YE0328 hemin transport system permease protein HmuU; transport system permease complement(2363078..2364082) Serratia proteamaculans 568 5605862 YP_001478396.1 CDS Spro_2167 NC_009832.1 2364082 2364912 R PFAM: periplasmic binding protein; KEGG: ypi:YpsIP31758_3803 hemin ABC transporter, periplasmic hemin-binding protein; periplasmic binding protein complement(2364082..2364912) Serratia proteamaculans 568 5605839 YP_001478397.1 CDS Spro_2168 NC_009832.1 2364909 2365943 R PFAM: Haemin-degrading family protein; KEGG: yen:YE0330 hemin transport protein; hemin-degrading family protein complement(2364909..2365943) Serratia proteamaculans 568 5605840 YP_001478398.1 CDS Spro_2169 NC_009832.1 2366007 2368091 R TIGRFAM: TonB-dependent hemoglobin/transferrin/lactoferrin family receptor; TonB-dependent heme/hemoglobin receptor family protein; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: yen:YE0331 hemin receptor precursor; TonB-dependent heme/hemoglobin receptor family protein complement(2366007..2368091) Serratia proteamaculans 568 5605841 YP_001478399.1 CDS Spro_2170 NC_009832.1 2368185 2368370 R KEGG: yen:YE0332 hemin uptake protein; hypothetical protein complement(2368185..2368370) Serratia proteamaculans 568 5605830 YP_001478400.1 CDS Spro_2171 NC_009832.1 2368539 2369024 R PFAM: glutathione peroxidase; KEGG: pae:PA2826 probable glutathione peroxidase; glutathione peroxidase complement(2368539..2369024) Serratia proteamaculans 568 5605831 YP_001478401.1 CDS Spro_2172 NC_009832.1 2369126 2370172 R tryptophan sensitive; catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate; phospho-2-dehydro-3-deoxyheptonate aldolase complement(2369126..2370172) Serratia proteamaculans 568 5605832 YP_001478402.1 CDS Spro_2173 NC_009832.1 2370367 2371245 R PFAM: protein of unknown function DUF299; KEGG: yen:YE2177 hypothetical protein; hypothetical protein complement(2370367..2371245) Serratia proteamaculans 568 5605786 YP_001478403.1 CDS Spro_2174 NC_009832.1 2371722 2374100 D catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase 2371722..2374100 Serratia proteamaculans 568 5605787 YP_001478404.1 CDS Spro_2175 NC_009832.1 2374573 2375673 R PFAM: protein of unknown function UPF0118; KEGG: ypi:YpsIP31758_1738 hypothetical protein; hypothetical protein complement(2374573..2375673) Serratia proteamaculans 568 5605788 YP_001478405.1 CDS Spro_2176 NC_009832.1 2375928 2378984 D PFAM: FAD linked oxidase domain protein; KEGG: yen:YE2174 hypothetical protein; FAD linked oxidase domain-containing protein 2375928..2378984 Serratia proteamaculans 568 5605772 YP_001478406.1 CDS Spro_2177 NC_009832.1 2378981 2379397 D PFAM: thioesterase superfamily protein; KEGG: eca:ECA1857 hypothetical protein; thioesterase superfamily protein 2378981..2379397 Serratia proteamaculans 568 5605773 YP_001478407.1 CDS Spro_2178 NC_009832.1 2379451 2379924 R KEGG: eca:ECA1858 hypothetical protein; hypothetical protein complement(2379451..2379924) Serratia proteamaculans 568 5605774 YP_001478408.1 CDS sufA NC_009832.1 2380411 2380782 D functions as a scaffold on which iron-sulfur clusters ([2Fe-2S]; [4Fe-4S]) are assembled; forms a homodimer; similar to IscA protein; iron-sulfur cluster assembly scaffold protein 2380411..2380782 Serratia proteamaculans 568 5605766 YP_001478409.1 CDS Spro_2180 NC_009832.1 2380797 2382293 D with SufCD activates cysteine desulfurase SufS; cysteine desulfurase activator complex subunit SufB 2380797..2382293 Serratia proteamaculans 568 5605767 YP_001478410.1 CDS sufC NC_009832.1 2382336 2383082 D part of SUF system involved in inserting iron-sulfur clusters into proteins; in Escherichia coli this protein forms a complex with SufBD; the SufBCD complex stimulates the cysteine desulfurase SufS in conjunction with SufE; cysteine desulfurase ATPase 2382336..2383082 Serratia proteamaculans 568 5605768 YP_001478411.1 CDS Spro_2182 NC_009832.1 2383057 2384349 D TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: ypi:YpsIP31758_1744 FeS assembly protein SufD; FeS assembly protein SufD 2383057..2384349 Serratia proteamaculans 568 5605751 YP_001478412.1 CDS Spro_2183 NC_009832.1 2384346 2385566 D TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: ypp:YPDSF_0748 selenocysteine lyase; SufS subfamily cysteine desulfurase 2384346..2385566 Serratia proteamaculans 568 5605752 YP_001478413.1 CDS Spro_2184 NC_009832.1 2385662 2386075 D Acts with SufS to catalyze the formation of L-alanine from L-cysteine; cysteine desufuration protein SufE 2385662..2386075 Serratia proteamaculans 568 5605753 YP_001478414.1 CDS Spro_2185 NC_009832.1 2386370 2387383 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: yen:YE2166 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 2386370..2387383 Serratia proteamaculans 568 5605697 YP_001478415.1 CDS Spro_2186 NC_009832.1 2387524 2387760 R PFAM: LPP repeat-containing protein; KEGG: yen:YE2165 major outer membrane lipoprotein; LPP repeat-containing protein complement(2387524..2387760) Serratia proteamaculans 568 5605698 YP_001478416.1 CDS Spro_2187 NC_009832.1 2388069 2389481 R catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase complement(2388069..2389481) Serratia proteamaculans 568 5605694 YP_001478417.1 CDS Spro_2188 NC_009832.1 2389884 2390189 R KEGG: ent:Ent638_3287 cupin 2, conserved barrel domain protein; cupin 2 domain-containing protein complement(2389884..2390189) Serratia proteamaculans 568 5605695 YP_001478418.1 CDS Spro_2189 NC_009832.1 2390797 2392173 R NorM; MdtK; functions as a Na(+)/drug antiporter; inactivation in Vibrio cholerae results in susceptibility to fluoroquinolones; multidrug efflux protein complement(2390797..2392173) Serratia proteamaculans 568 5605323 YP_001478419.1 CDS Spro_2190 NC_009832.1 2392416 2393066 D catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 2392416..2393066 Serratia proteamaculans 568 5605605 YP_001478420.1 CDS Spro_2191 NC_009832.1 2393120 2393392 D KEGG: rsq:Rsph17025_0056 hypothetical protein; hypothetical protein 2393120..2393392 Serratia proteamaculans 568 5605606 YP_001478421.1 CDS Spro_2192 NC_009832.1 2393474 2394625 R catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge; cyclopropane fatty acyl phospholipid synthase complement(2393474..2394625) Serratia proteamaculans 568 5605607 YP_001478422.1 CDS Spro_2193 NC_009832.1 2394966 2396174 R uncharacterized member of the major facilitator superfamily (MFS); inner membrane transport protein YdhC complement(2394966..2396174) Serratia proteamaculans 568 5605578 YP_001478423.1 CDS Spro_2194 NC_009832.1 2396298 2397242 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ypp:YPDSF_0759 LysR-family transcriptional regulatory protein; putative DNA-binding transcriptional regulator 2396298..2397242 Serratia proteamaculans 568 5605579 YP_001478424.1 CDS Spro_2195 NC_009832.1 2397239 2398264 R binds to the purF operator and coregulates other genes for de novo purine nucleotide synthesis; is involved in regulation of purB, purC, purEK, purHD, purL, purMN and guaBA expression; binds hypoxanthine and guanine as inducers; DNA-binding transcriptional repressor PurR complement(2397239..2398264) Serratia proteamaculans 568 5605580 YP_001478425.1 CDS Spro_2196 NC_009832.1 2398731 2399309 R SodB; iron binding; present under aerobic and anaerobic conditions; destroys free radicals; superoxide dismutase complement(2398731..2399309) Serratia proteamaculans 568 5605512 YP_001478426.1 CDS Spro_2197 NC_009832.1 2399503 2400324 R PFAM: NLP/P60 protein; KEGG: yen:YE2156 hypothetical protein; NLP/P60 protein complement(2399503..2400324) Serratia proteamaculans 568 5605513 YP_001478427.1 CDS Spro_2198 NC_009832.1 2400739 2401086 D TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: ypi:YpsIP31758_1758 monothiol glutaredoxin GrxD; hypothetical protein 2400739..2401086 Serratia proteamaculans 568 5605514 YP_001478428.1 CDS Spro_2199 NC_009832.1 2401156 2401836 R Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A); ribonuclease T complement(2401156..2401836) Serratia proteamaculans 568 5605481 YP_001478429.1 CDS Spro_2200 NC_009832.1 2401915 2402322 R KEGG: yen:YE2153 lactoylglutathione lyase; TIGRFAM: lactoylglutathione lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; lactoylglutathione lyase complement(2401915..2402322) Serratia proteamaculans 568 5605482 YP_001478430.1 CDS Spro_2201 NC_009832.1 2402654 2403193 D KEGG: plu:plu3987 unnamed protein product; some similarities with isopentenyl-diphosphate delta-isomerase (IPP isomerase) (isopentenyl pyrophosphate isomerase); TIGRFAM: isopentenyl-diphosphate delta-isomerase, type 1; PFAM: NUDIX hydrolase; isopentenyl-diphosphate delta-isomerase, type 1 2402654..2403193 Serratia proteamaculans 568 5605483 YP_001478431.1 CDS Spro_2202 NC_009832.1 2403264 2404361 R FMN-linked; catalyzes the formation of N-ethylsuccinimide from N-ethylmaleimide; N-ethylmaleimide reductase complement(2403264..2404361) Serratia proteamaculans 568 5605374 YP_001478432.1 CDS Spro_2203 NC_009832.1 2404447 2405067 R PFAM: regulatory protein TetR; KEGG: yen:YE2151 TetR-family transcriptional regulatory protein; TetR family transcriptional regulator complement(2404447..2405067) Serratia proteamaculans 568 5605375 YP_001478433.1 CDS Spro_2204 NC_009832.1 2405171 2406808 R with ZipA and an unidentified 24 kDa protein forms a complex involved in cell division; putative cell division protein complement(2405171..2406808) Serratia proteamaculans 568 5605376 YP_001478434.1 CDS Spro_2205 NC_009832.1 2406970 2407611 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: pmy:Pmen_0809 3-beta hydroxysteroid dehydrogenase/isomerase; NAD-dependent epimerase/dehydratase complement(2406970..2407611) Serratia proteamaculans 568 5605333 YP_001478435.1 CDS Spro_2206 NC_009832.1 2407753 2408664 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pmy:Pmen_0810 transcriptional regulator, LysR family; LysR family transcriptional regulator 2407753..2408664 Serratia proteamaculans 568 5605334 YP_001478436.1 CDS Spro_2207 NC_009832.1 2408686 2408925 D PFAM: protein of unknown function DUF1289; KEGG: yen:YE2149 hypothetical protein; hypothetical protein 2408686..2408925 Serratia proteamaculans 568 5605335 YP_001478437.1 CDS Spro_2208 NC_009832.1 2409025 2409921 D PFAM: aldo/keto reductase; KEGG: yen:YE2148 putative aldo/keto reductase; aldo/keto reductase 2409025..2409921 Serratia proteamaculans 568 5605327 YP_001478438.1 CDS Spro_2209 NC_009832.1 2409988 2411838 R PFAM: Hemolysin-type calcium-binding region; lipase class 3; KEGG: plu:plu2313 hypothetical protein; triacylglycerol lipase complement(2409988..2411838) Serratia proteamaculans 568 5605328 YP_001478439.1 CDS Spro_2210 NC_009832.1 2412079 2412600 D PFAM: superoxide dismutase copper/zinc binding; KEGG: psp:PSPPH_1224 superoxide dismutase, Cu-Zn; superoxide dismutase 2412079..2412600 Serratia proteamaculans 568 5605329 YP_001478440.1 CDS Spro_2211 NC_009832.1 2412610 2414622 R PFAM: Fusaric acid resistance protein conserved region; KEGG: yen:YE2147 hypothetical protein; fusaric acid resistance protein region complement(2412610..2414622) Serratia proteamaculans 568 5605295 YP_001478441.1 CDS Spro_2212 NC_009832.1 2414647 2415504 R PFAM: secretion protein HlyD family protein; KEGG: yen:YE2146 putative HlyD-family protein; secretion protein HlyD family protein complement(2414647..2415504) Serratia proteamaculans 568 5605296 YP_001478442.1 CDS Spro_2213 NC_009832.1 2415508 2415744 R PFAM: protein of unknown function DUF1656; KEGG: yen:YE2145 putative inner membrane protein; hypothetical protein complement(2415508..2415744) Serratia proteamaculans 568 5605297 YP_001478443.1 CDS Spro_2214 NC_009832.1 2415925 2416359 D Transcription regulator that can both activate or repress expression; transcriptional regulator SlyA 2415925..2416359 Serratia proteamaculans 568 5605292 YP_001478444.1 CDS Spro_2215 NC_009832.1 2416447 2416938 R PFAM: 17 kDa surface antigen; KEGG: sgl:SG1444 outer membrane lipoprotein; 17 kDa surface antigen complement(2416447..2416938) Serratia proteamaculans 568 5605293 YP_001478445.1 CDS anmK NC_009832.1 2417279 2418400 D catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase 2417279..2418400 Serratia proteamaculans 568 5605294 YP_001478446.1 CDS Spro_2217 NC_009832.1 2418446 2418748 D KEGG: yen:YE2141 putative lipoprotein; putative lipoprotein 2418446..2418748 Serratia proteamaculans 568 5605264 YP_001478447.1 CDS Spro_2218 NC_009832.1 2418836 2419489 D catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate; pyridoxamine 5'-phosphate oxidase 2418836..2419489 Serratia proteamaculans 568 5605265 YP_001478448.1 CDS Spro_2219 NC_009832.1 2419629 2420903 D catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 2419629..2420903 Serratia proteamaculans 568 5605266 YP_001478449.1 CDS Spro_2220 NC_009832.1 2420969 2421829 D catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal; pyridoxamine kinase 2420969..2421829 Serratia proteamaculans 568 5605256 YP_001478450.1 CDS Spro_2221 NC_009832.1 2421879 2422484 R PFAM: Glutathione S-transferase domain; KEGG: yen:YE2137 glutathione S-transferase; glutathionine S-transferase complement(2421879..2422484) Serratia proteamaculans 568 5605257 YP_001478451.1 CDS Spro_2222 NC_009832.1 2422577 2423461 R TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; KEGG: pfl:PFL_3321 dihydrodipicolinate synthase; dihydrodipicolinate synthase complement(2422577..2423461) Serratia proteamaculans 568 5605250 YP_001478452.1 CDS Spro_2223 NC_009832.1 2423853 2424119 R KEGG: yen:YE2136 hypothetical protein; hypothetical protein complement(2423853..2424119) Serratia proteamaculans 568 5605251 YP_001478453.1 CDS Spro_2224 NC_009832.1 2424222 2424887 R PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: sme:SMc02632 hypothetical protein; metal dependent phosphohydrolase complement(2424222..2424887) Serratia proteamaculans 568 5605252 YP_001478454.1 CDS Spro_2225 NC_009832.1 2425121 2425516 D KEGG: cvi:CV_2861 hypothetical protein; hypothetical protein 2425121..2425516 Serratia proteamaculans 568 5605244 YP_001478455.1 CDS Spro_2226 NC_009832.1 2425894 2426271 R PFAM: Endoribonuclease L-PSP; KEGG: vpa:VP1797 hypothetical protein; endoribonuclease L-PSP complement(2425894..2426271) Serratia proteamaculans 568 5605245 YP_001478456.1 CDS Spro_2227 NC_009832.1 2426415 2427269 D PFAM: aminoglycoside/hydroxyurea antibiotic resistance kinase; KEGG: pau:PA14_40450 streptomycin 3''-phosphotransferase; aminoglycoside/hydroxyurea antibiotic resistance kinase 2426415..2427269 Serratia proteamaculans 568 5605246 YP_001478457.1 CDS Spro_2228 NC_009832.1 2427234 2427734 R PFAM: Cupin 2 conserved barrel domain protein; KEGG: psp:PSPPH_1841 auxin-binding protein, putative; cupin 2 domain-containing protein complement(2427234..2427734) Serratia proteamaculans 568 5605238 YP_001478458.1 CDS Spro_2229 NC_009832.1 2427782 2428261 R PFAM: MEKHLA domain protein; KEGG: psb:Psyr_0755 hypothetical protein; MEKHLA domain-containing protein complement(2427782..2428261) Serratia proteamaculans 568 5605239 YP_001478459.1 CDS Spro_2230 NC_009832.1 2428379 2429572 R TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein; Xanthine/uracil/vitamin C permease; KEGG: plu:plu0511 unnamed protein product; highly similar to benzoate membrane transport protein; benzoate transporter complement(2428379..2429572) Serratia proteamaculans 568 5605240 YP_001478460.1 CDS Spro_2231 NC_009832.1 2429686 2430249 D PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: eca:ECA4472 putative DNA-binding protein; XRE family transcriptional regulator 2429686..2430249 Serratia proteamaculans 568 5605178 YP_001478461.1 CDS Spro_2232 NC_009832.1 2430414 2432504 D PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9A prolyl oligopeptidase domain protein beta-propeller; KEGG: xcv:XCV0685 putative prolyl oligopeptidase precursor; prolyl oligopeptidase 2430414..2432504 Serratia proteamaculans 568 5605179 YP_001478462.1 CDS tppB NC_009832.1 2432574 2434094 R mutations in this gene confer resistance to the toxic peptide alafosfalin in Salmonella typhimurium; member of proton-dependent oligopeptide transport (POT) system family; in Escherichia coli this gene is regulated by OmpR although not via osmoregulation; putative tripeptide transporter permease complement(2432574..2434094) Serratia proteamaculans 568 5605180 YP_001478463.1 CDS Spro_2234 NC_009832.1 2434696 2435337 R KEGG: kpn:KPN_01970 endonuclease III; DNA glycosylase/apyrimidinic (AP) lyase; TIGRFAM: endonuclease III; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; SMART: iron-sulfur cluster loop; endonuclease III complement(2434696..2435337) Serratia proteamaculans 568 5605172 YP_001478464.1 CDS Spro_2235 NC_009832.1 2435337 2436035 R in Excherichia coli RsxABCDEG reduces SoxR which turns off induction of SoxS transcription factor in the absence of oxidizing agents; similar to the rnfABCDGE operon in Rhodobacter capsulatus involved in transferring electrons to nitrogenase; electron transport complex RsxE subunit complement(2435337..2436035) Serratia proteamaculans 568 5605173 YP_001478465.1 CDS Spro_2236 NC_009832.1 2436032 2436661 R part of membrane-bound complex hought to be involved in electron transport to nitrogen; electron transport complex protein RnfG complement(2436032..2436661) Serratia proteamaculans 568 5605174 YP_001478466.1 CDS rnfD NC_009832.1 2436671 2437756 R RnfD; RsxD; required for nitrogen fixation in Rhodobacter capsulatus; part of a membrane-bound complex thought to be involved in electron transport to nitrogenase; in Escherichia coli this gene is part of a cluster controlling SoxR-mediated induction of the SoxS transcription factor in the absence of oxidizing agents; electron transport complex protein RnfD complement(2436671..2437756) Serratia proteamaculans 568 5605169 YP_001478467.1 CDS Spro_2238 NC_009832.1 2438138 2439031 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: yen:YE1991 putative AraC-family transcriptional regulatory protein; AraC family transcriptional regulator 2438138..2439031 Serratia proteamaculans 568 5605170 YP_001478468.1 CDS Spro_2239 NC_009832.1 2439067 2441178 R TIGRFAM: electron transport complex, RnfABCDGE type, C subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: ypi:YpsIP31758_1896 electron transport complex, RnfABCDGE type, C subunit; RnfABCDGE type electron transport complex subunit C complement(2439067..2441178) Serratia proteamaculans 568 5605171 YP_001478469.1 CDS Spro_2240 NC_009832.1 2441171 2441743 R part of membrane-bound complex thought to be involved in electron transport to nitrogen; electron transport complex protein RnfB complement(2441171..2441743) Serratia proteamaculans 568 5605142 YP_001478470.1 CDS Spro_2241 NC_009832.1 2441743 2442324 R TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; PFAM: RnfA-Nqr electron transport subunit; KEGG: yen:YE1994 hypothetical protein; RnfABCDGE type electron transport complex subunit A complement(2441743..2442324) Serratia proteamaculans 568 5605143 YP_001478471.1 CDS Spro_2242 NC_009832.1 2442470 2442910 R KEGG: yen:YE1996 hypothetical protein; hypothetical protein complement(2442470..2442910) Serratia proteamaculans 568 5605144 YP_001478472.1 CDS Spro_2243 NC_009832.1 2443070 2444575 R catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism; L-arabinose isomerase complement(2443070..2444575) Serratia proteamaculans 568 5605121 YP_001478473.1 CDS Spro_2244 NC_009832.1 2444607 2446292 R catalyzes the phosphorylation of ribulose to ribulose 5-phosphate; ribulokinase complement(2444607..2446292) Serratia proteamaculans 568 5605122 YP_001478474.1 CDS Spro_2245 NC_009832.1 2446654 2447637 D PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: yen:YE2003 L-arabinose-binding periplasmic protein precursor; monosaccharide-transporting ATPase 2446654..2447637 Serratia proteamaculans 568 5605123 YP_001478475.1 CDS araG NC_009832.1 2447698 2449233 D Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; L-arabinose transporter ATP-binding protein 2447698..2449233 Serratia proteamaculans 568 5605100 YP_001478476.1 CDS araH NC_009832.1 2449251 2450234 D Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; L-arabinose transporter permease 2449251..2450234 Serratia proteamaculans 568 5605101 YP_001478477.1 CDS Spro_2248 NC_009832.1 2450337 2451254 D positive and negative regulator; regulates the araBAD and araFGH operons and other genes involved in the transport and catabolism of L-arabinose; DNA-binding transcriptional regulator AraC 2450337..2451254 Serratia proteamaculans 568 5605102 YP_001478478.1 CDS Spro_2249 NC_009832.1 2451336 2452376 D PFAM: Semialdehyde dehydrogenase NAD - binding; oxidoreductase domain protein; Oxidoreductase domain; KEGG: yen:YE2007 putative oxidoreductase; putative oxidoreductase 2451336..2452376 Serratia proteamaculans 568 5605089 YP_001478479.1 CDS Spro_2250 NC_009832.1 2452443 2453441 D KEGG: yen:YE2008 hypothetical protein; hypothetical protein 2452443..2453441 Serratia proteamaculans 568 5605090 YP_001478480.1 CDS Spro_2251 NC_009832.1 2453576 2454574 R catalyzes the formation of inosine from adenosine; adenosine deaminase complement(2453576..2454574) Serratia proteamaculans 568 5605091 YP_001478481.1 CDS Spro_2252 NC_009832.1 2454764 2455360 R KEGG: kpn:KPN_04198 putative serine protease; putative serine protease complement(2454764..2455360) Serratia proteamaculans 568 5605084 YP_001478482.1 CDS Spro_2253 NC_009832.1 2455357 2455794 R PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: kpn:KPN_04197 putative PTS family enzyme IIA component; putative PTS IIA-like nitrogen-regulatory protein PtsN complement(2455357..2455794) Serratia proteamaculans 568 5605085 YP_001478483.1 CDS Spro_2254 NC_009832.1 2455804 2456073 R KEGG: eca:ECA2355 hypothetical protein; hypothetical protein complement(2455804..2456073) Serratia proteamaculans 568 5605086 YP_001478484.1 CDS Spro_2255 NC_009832.1 2456148 2456990 R KEGG: kpn:KPN_04196 putative ketose-bisphosphate aldolase, class-II; TIGRFAM: ketose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II; ketose-bisphosphate aldolase complement(2456148..2456990) Serratia proteamaculans 568 5605073 YP_001478485.1 CDS Spro_2256 NC_009832.1 2456977 2458344 R membrane component; functions with enzymes IIB (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr; PTS system ascorbate-specific transporter subunit IIC complement(2456977..2458344) Serratia proteamaculans 568 5605074 YP_001478486.1 CDS Spro_2257 NC_009832.1 2458337 2458651 R PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: kpn:KPN_04194 putative PTS family enzyme II component; phosphotransferase system lactose/cellobiose-specific IIB subunit complement(2458337..2458651) Serratia proteamaculans 568 5605026 YP_001478487.1 CDS Spro_2258 NC_009832.1 2458662 2459642 R PFAM: phosphofructokinase; KEGG: kpn:KPN_04193 putative 6-phosphofructokinase; phosphofructokinase complement(2458662..2459642) Serratia proteamaculans 568 5605027 YP_001478488.1 CDS Spro_2259 NC_009832.1 2460027 2460782 R PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: bch:Bcen2424_0941 transcriptional regulator, DeoR family; DeoR family transcriptional regulator complement(2460027..2460782) Serratia proteamaculans 568 5605028 YP_001478489.1 CDS Spro_2260 NC_009832.1 2460883 2461479 D PFAM: NUDIX hydrolase; KEGG: bvi:Bcep1808_0859 NUDIX hydrolase; NUDIX hydrolase 2460883..2461479 Serratia proteamaculans 568 5604949 YP_001478490.1 CDS Spro_2261 NC_009832.1 2461476 2461844 D KEGG: bch:Bcen2424_0943 hypothetical protein; hypothetical protein 2461476..2461844 Serratia proteamaculans 568 5604950 YP_001478491.1 CDS Spro_2262 NC_009832.1 2461882 2463063 R PFAM: aminotransferase class I and II; KEGG: yen:YE2010 putative aminotransferase; class I and II aminotransferase complement(2461882..2463063) Serratia proteamaculans 568 5604951 YP_001478492.1 CDS Spro_2263 NC_009832.1 2463056 2464480 R TIGRFAM: PTS system, maltose and glucose-specific subfamily, IIC subunit; PTS system, maltose and glucose-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system PTS EIIB protein; phosphotransferase system EIIC; KEGG: yen:YE2011 PTS system, maltose and glucose-specific IIAbc component; PTS system maltose and glucose-specific transporter IIBC complement(2463056..2464480) Serratia proteamaculans 568 5604936 YP_001478493.1 CDS Spro_2264 NC_009832.1 2464528 2465814 R PFAM: integrase family protein; KEGG: yen:YE2364 putative phage integrase; integrase family protein complement(2464528..2465814) Serratia proteamaculans 568 5604937 YP_001478494.1 CDS Spro_2265 NC_009832.1 2465829 2466107 R PFAM: protein of unknown function DUF1233 excisionase putative; KEGG: ypm:YP_1930 putative phage excisionase; hypothetical protein complement(2465829..2466107) Serratia proteamaculans 568 5604938 YP_001478495.1 CDS Spro_2266 NC_009832.1 2467811 2468089 D PFAM: transposase IS3/IS911 family protein; KEGG: psa:PST_3402 ISxac3 transposase; transposase IS3/IS911 family protein 2467811..2468089 Serratia proteamaculans 568 5604907 YP_001478496.1 CDS Spro_2267 NC_009832.1 2468110 2468961 D PFAM: Integrase catalytic region; KEGG: psa:PST_1859 transposase, IS3 family; Integrase catalytic subunit 2468110..2468961 Serratia proteamaculans 568 5604908 YP_001478497.1 CDS Spro_2268 NC_009832.1 2469231 2470421 R PFAM: acyltransferase 3; KEGG: ret:RHE_CH00500 probable acyltransferase protein; acyltransferase 3 complement(2469231..2470421) Serratia proteamaculans 568 5604909 YP_001478498.1 CDS Spro_2269 NC_009832.1 2470649 2471356 R PFAM: lipolytic protein G-D-S-L family; KEGG: vvu:VV1_1768 lysophospholipase L1; GDSL family lipase complement(2470649..2471356) Serratia proteamaculans 568 5604904 YP_001478499.1 CDS Spro_2270 NC_009832.1 2471623 2471847 R KEGG: yen:YE2011 PTS system, maltose and glucose-specific IIAbc component; PTS system maltose and glucose-specific transporter subunit IIABC complement(2471623..2471847) Serratia proteamaculans 568 5604905 YP_001478500.1 CDS Spro_2271 NC_009832.1 2472046 2473104 D regulates malXY which are involved in maltose-glucose transport; DNA-binding transcriptional repressor MalI 2472046..2473104 Serratia proteamaculans 568 5604906 YP_001478501.1 CDS Spro_2272 NC_009832.1 2473107 2473994 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_4361 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2473107..2473994) Serratia proteamaculans 568 5604898 YP_001478502.1 CDS Spro_2273 NC_009832.1 2474186 2475322 D PFAM: beta-lactamase; KEGG: sbl:Sbal_2086 beta-lactamase; beta-lactamase 2474186..2475322 Serratia proteamaculans 568 5604899 YP_001478503.1 CDS Spro_2274 NC_009832.1 2475334 2476263 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: vpa:VP1676 putative transcriptional regulator; LysR family transcriptional regulator complement(2475334..2476263) Serratia proteamaculans 568 5604900 YP_001478504.1 CDS Spro_2275 NC_009832.1 2476366 2477517 D PFAM: beta-lactamase; KEGG: bpd:BURPS668_A1860 putative esterase; beta-lactamase 2476366..2477517 Serratia proteamaculans 568 5604880 YP_001478505.1 CDS Spro_2276 NC_009832.1 2477561 2479090 R PFAM: protein of unknown function DUF945; KEGG: yen:YE2014 hypothetical protein; hypothetical protein complement(2477561..2479090) Serratia proteamaculans 568 5604881 YP_001478506.1 CDS Spro_2277 NC_009832.1 2479245 2480423 R TIGRFAM: mannose-6-phosphate isomerase, class I; PFAM: mannose-6-phosphate isomerase type I; KEGG: yen:YE2015 mannose-6-phosphate isomerase; mannose-6-phosphate isomerase, class I complement(2479245..2480423) Serratia proteamaculans 568 5604882 YP_001478507.1 CDS Spro_2278 NC_009832.1 2480877 2481230 D KEGG: reu:Reut_A2446 probable signal peptide protein; hypothetical protein 2480877..2481230 Serratia proteamaculans 568 5604840 YP_001478508.1 CDS fumC NC_009832.1 2481484 2482881 D class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 2481484..2482881 Serratia proteamaculans 568 5604841 YP_001478509.1 CDS Spro_2280 NC_009832.1 2482979 2483917 R binds to DNA replication terminator sequences to prevent passage of replication forks; DNA replication terminus site-binding protein complement(2482979..2483917) Serratia proteamaculans 568 5604842 YP_001478510.1 CDS Spro_2281 NC_009832.1 2484073 2485338 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: yen:YE2021 hypothetical protein; major facilitator transporter complement(2484073..2485338) Serratia proteamaculans 568 5604837 YP_001478511.1 CDS Spro_2282 NC_009832.1 2485484 2486392 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: yen:YE2022 probable LysR-family transcriptional regulator; LysR family transcriptional regulator 2485484..2486392 Serratia proteamaculans 568 5604838 YP_001478512.1 CDS Spro_2283 NC_009832.1 2486532 2487749 D PFAM: ROK family protein; KEGG: yen:YE2023 putative ROK family transcriptional regulatory protein; ROK family protein 2486532..2487749 Serratia proteamaculans 568 5604839 YP_001478513.1 CDS Spro_2284 NC_009832.1 2487901 2488572 D KEGG: yen:YE2024 putative dethiobiotin synthetase; TIGRFAM: dethiobiotin synthase; PFAM: Cobyrinic acid ac-diamide synthase; dethiobiotin synthase 2487901..2488572 Serratia proteamaculans 568 5604807 YP_001478514.1 CDS Spro_2285 NC_009832.1 2488569 2489849 R PFAM: Chloride channel core; KEGG: yen:YE2025 hypothetical protein; putative voltage-gated ClC-type chloride channel ClcB complement(2488569..2489849) Serratia proteamaculans 568 5604808 YP_001478515.1 CDS Spro_2286 NC_009832.1 2490124 2491611 D TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA2256 putative transporter; EmrB/QacA family drug resistance transporter 2490124..2491611 Serratia proteamaculans 568 5604809 YP_001478516.1 CDS Spro_2287 NC_009832.1 2491651 2491950 R PFAM: protein of unknown function DUF1161; KEGG: ypi:YpsIP31758_1866 putative lipoprotein; hypothetical protein complement(2491651..2491950) Serratia proteamaculans 568 5604795 YP_001478517.1 CDS Spro_2288 NC_009832.1 2492041 2492409 R PFAM: protein of unknown function DUF1283; KEGG: yen:YE2026 hypothetical protein; hypothetical protein complement(2492041..2492409) Serratia proteamaculans 568 5604796 YP_001478518.1 CDS Spro_2289 NC_009832.1 2492558 2492884 D PFAM: protein of unknown function UPF0060; KEGG: yen:YE2027 hypothetical protein; hypothetical protein 2492558..2492884 Serratia proteamaculans 568 5604797 YP_001478519.1 CDS Spro_2290 NC_009832.1 2492920 2493669 R NADP(+)-dependent; catalyzes the formation of 2-aminomalonate-semialdehyde from L-serine; can also use 3-hydroxybutyrate, 3-hydroxy-isobutyrate, D-threonine, L-allo-threonine,D-serine; 3-hydroxy acid dehydrogenase complement(2492920..2493669) Serratia proteamaculans 568 5604793 YP_001478520.1 CDS Spro_2291 NC_009832.1 2493859 2494380 R PFAM: GCN5-related N-acetyltransferase; KEGG: bch:Bcen2424_3796 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase complement(2493859..2494380) Serratia proteamaculans 568 5604794 YP_001478521.1 CDS Spro_2292 NC_009832.1 2494477 2495949 R PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE2029 putative membrane transport protein; major facilitator transporter complement(2494477..2495949) Serratia proteamaculans 568 5604784 YP_001478522.1 CDS Spro_2293 NC_009832.1 2496118 2497197 R PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: vei:Veis_1240 ABC transporter related; ABC transporter-like protein complement(2496118..2497197) Serratia proteamaculans 568 5604785 YP_001478523.1 CDS Spro_2294 NC_009832.1 2497197 2498150 R PFAM: PfkB domain protein; KEGG: ret:RHE_CH03378 probable sugar kinase protein; ribokinase-like domain-containing protein complement(2497197..2498150) Serratia proteamaculans 568 5604786 YP_001478524.1 CDS Spro_2295 NC_009832.1 2498170 2499009 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb21219 putative sugar uptake ABC transporter permease protein; binding-protein-dependent transport systems inner membrane component complement(2498170..2499009) Serratia proteamaculans 568 5604778 YP_001478525.1 CDS Spro_2296 NC_009832.1 2498999 2499913 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: smd:Smed_4556 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component complement(2498999..2499913) Serratia proteamaculans 568 5604779 YP_001478526.1 CDS Spro_2297 NC_009832.1 2499917 2501167 R PFAM: extracellular solute-binding protein family 1; KEGG: ret:RHE_CH03374 probable sugar ABC transporter, substrate-binding protein; extracellular solute-binding protein complement(2499917..2501167) Serratia proteamaculans 568 5604780 YP_001478527.1 CDS Spro_2298 NC_009832.1 2501268 2502443 D PFAM: ROK family protein; KEGG: cvi:CV_2895 probable transcriptional regulator protein; ROK family protein 2501268..2502443 Serratia proteamaculans 568 5604705 YP_001478528.1 CDS Spro_2299 NC_009832.1 2502754 2504085 D TIGRFAM: Guanine deaminase; PFAM: amidohydrolase; KEGG: ppr:PBPRA1930 putative guanine aminohydrolase; guanine deaminase 2502754..2504085 Serratia proteamaculans 568 5604706 YP_001478529.1 CDS Spro_2300 NC_009832.1 2504082 2505512 D TIGRFAM: Xanthine dehydrogenase small subunit; PFAM: ferredoxin; molybdopterin dehydrogenase FAD-binding; [2Fe-2S]-binding domain protein; CO dehydrogenase flavoprotein domain protein; KEGG: pst:PSPTO_3660 xanthine dehydrogenase, N-terminal subunit; xanthine dehydrogenase small subunit 2504082..2505512 Serratia proteamaculans 568 5604707 YP_001478530.1 CDS Spro_2301 NC_009832.1 2505505 2507898 D KEGG: pau:PA14_44740 xanthine dehydrogenase; TIGRFAM: Xanthine dehydrogenase molybdopterin binding subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; xanthine dehydrogenase molybdopterin binding subunit 2505505..2507898 Serratia proteamaculans 568 5604699 YP_001478531.1 CDS Spro_2302 NC_009832.1 2507891 2508658 D TIGRFAM: Xanthine dehydrogenase accessory protein XdhC; PFAM: protein of unknown function DUF182; KEGG: pau:PA14_44760 putative xanthine dehydrogenase accessory factor X; xanthine dehydrogenase accessory protein XdhC 2507891..2508658 Serratia proteamaculans 568 5604700 YP_001478532.1 CDS Spro_2303 NC_009832.1 2508674 2509678 R KEGG: vei:Veis_4629 fumarylacetoacetate (FAA) hydrolase; fumarylacetoacetate (FAA) hydrolase complement(2508674..2509678) Serratia proteamaculans 568 5604701 YP_001478533.1 CDS Spro_2304 NC_009832.1 2509675 2510256 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: vei:Veis_4630 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(2509675..2510256) Serratia proteamaculans 568 5604690 YP_001478534.1 CDS Spro_2305 NC_009832.1 2510283 2511128 R PFAM: alpha/beta hydrolase fold; KEGG: bvi:Bcep1808_4725 alpha/beta hydrolase fold; alpha/beta hydrolase fold domain-containing protein complement(2510283..2511128) Serratia proteamaculans 568 5604691 YP_001478535.1 CDS Spro_2306 NC_009832.1 2511495 2513696 D PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: xac:XAC0249 peptidyl-dipeptidase; peptidyl-dipeptidase Dcp 2511495..2513696 Serratia proteamaculans 568 5604692 YP_001478536.1 CDS Spro_2307 NC_009832.1 2513827 2515134 R PFAM: major facilitator superfamily MFS_1; KEGG: ppu:PP_3940 major facilitator family transporter; major facilitator transporter complement(2513827..2515134) Serratia proteamaculans 568 5604687 YP_001478537.1 CDS Spro_2308 NC_009832.1 2515253 2515888 R PFAM: isochorismatase hydrolase; KEGG: ppf:Pput_1896 isochorismatase hydrolase; N-carbamoylsarcosine amidase complement(2515253..2515888) Serratia proteamaculans 568 5604688 YP_001478538.1 CDS Spro_2309 NC_009832.1 2515898 2516650 R PFAM: Asp/Glu racemase; KEGG: ppf:Pput_1895 Asp/Glu racemase; Asp/Glu racemase complement(2515898..2516650) Serratia proteamaculans 568 5604689 YP_001478539.1 CDS Spro_2310 NC_009832.1 2516667 2517461 R PFAM: alpha/beta hydrolase fold; KEGG: ppu:PP_3943 hydrolase, alpha/beta fold family; alpha/beta hydrolase fold domain-containing protein complement(2516667..2517461) Serratia proteamaculans 568 5604643 YP_001478540.1 CDS Spro_2311 NC_009832.1 2517458 2518609 R PFAM: monooxygenase FAD-binding; KEGG: ppf:Pput_1893 monooxygenase, FAD-binding; FAD-binding monooxygenase complement(2517458..2518609) Serratia proteamaculans 568 5604644 YP_001478541.1 CDS Spro_2312 NC_009832.1 2518938 2519996 D KEGG: ppf:Pput_1892 hypothetical protein; hypothetical protein 2518938..2519996 Serratia proteamaculans 568 5604645 YP_001478542.1 CDS Spro_2313 NC_009832.1 2520062 2520535 D PFAM: regulatory protein MarR; KEGG: reu:Reut_A2508 regulatory protein, MarR; MarR family transcriptional regulator 2520062..2520535 Serratia proteamaculans 568 5604592 YP_001478543.1 CDS Spro_2314 NC_009832.1 2520614 2521156 D PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: ppf:Pput_1890 (2Fe-2S)-binding domain protein; 2Fe-2S iron-sulfur cluster binding domain-containing protein 2520614..2521156 Serratia proteamaculans 568 5604593 YP_001478544.1 CDS Spro_2315 NC_009832.1 2521149 2524724 D PFAM: cytochrome c class I; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: ppu:PP_3948 aldehyde dehydrogenase family protein, putative/cytochrome c family protein, putative; aldehyde oxidase and xanthine dehydrogenase 2521149..2524724 Serratia proteamaculans 568 5604594 YP_001478545.1 CDS Spro_2316 NC_009832.1 2525461 2526756 D PFAM: secretion protein HlyD family protein; KEGG: pau:PA14_10350 putative secretion protein; secretion protein HlyD family protein 2525461..2526756 Serratia proteamaculans 568 5604565 YP_001478546.1 CDS Spro_2317 NC_009832.1 2526759 2528894 D PFAM: ABC transporter transmembrane region; ABC transporter related; peptidase C39 bacteriocin processing; SMART: AAA ATPase; KEGG: bps:BPSL3093 colicin V processing peptidase; ABC transporter-like protein 2526759..2528894 Serratia proteamaculans 568 5604566 YP_001478547.1 CDS Spro_2318 NC_009832.1 2528921 2530078 R PFAM: monooxygenase FAD-binding; KEGG: kpn:KPN_01663 putative flavoprotein monooxygenase; FAD-binding monooxygenase complement(2528921..2530078) Serratia proteamaculans 568 5604567 YP_001478548.1 CDS Spro_2319 NC_009832.1 2530400 2532607 D PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: swi:Swit_3976 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase 2530400..2532607 Serratia proteamaculans 568 5604381 YP_001478549.1 CDS Spro_2320 NC_009832.1 2532621 2533079 D PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bch:Bcen2424_4406 (2Fe-2S)-binding domain protein; 2Fe-2S iron-sulfur cluster binding domain-containing protein 2532621..2533079 Serratia proteamaculans 568 5604382 YP_001478550.1 CDS Spro_2321 NC_009832.1 2533091 2534395 D PFAM: cytochrome c class I; KEGG: bch:Bcen2424_5380 cytochrome c, class I; gluconate 2-dehydrogenase 2533091..2534395 Serratia proteamaculans 568 5604383 YP_001478551.1 CDS Spro_2322 NC_009832.1 2534432 2535601 R PFAM: Cupin domain protein; Cupin 2 conserved barrel domain protein; KEGG: plu:plu2325 putative oxalate decarboxylase; oxalate decarboxylase complement(2534432..2535601) Serratia proteamaculans 568 5604243 YP_001478552.1 CDS Spro_2323 NC_009832.1 2536186 2538051 D TIGRFAM: PTS system, glucose subfamily, IIA subunit; PTS system, beta-glucoside-specific IIABC subunit; PFAM: sugar-specific permease EIIA 1 domain; phosphotransferase system PTS EIIB protein; phosphotransferase system EIIC; KEGG: eca:ECA0860 PTS system, IIabc component; PTS system beta-glucoside-specific transporter subunit IIABC 2536186..2538051 Serratia proteamaculans 568 5604244 YP_001478553.1 CDS Spro_2324 NC_009832.1 2538048 2539460 D PFAM: glycoside hydrolase family 1; KEGG: eca:ECA0859 beta-glucosidase; glycoside hydrolase family protein 2538048..2539460 Serratia proteamaculans 568 5604245 YP_001478554.1 CDS Spro_2325 NC_009832.1 2539486 2540325 D PFAM: CAT RNA-binding domain protein; PRD domain protein; KEGG: eca:ECA0858 putative beta-glucoside operon antiterminator; transcriptional antiterminator, BglG 2539486..2540325 Serratia proteamaculans 568 5604177 YP_001478555.1 CDS Spro_2326 NC_009832.1 2540322 2541242 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mms:mma_1186 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2540322..2541242) Serratia proteamaculans 568 5604178 YP_001478556.1 CDS Spro_2327 NC_009832.1 2541267 2541914 D PFAM: Chromate transporter; KEGG: bbr:BB1316 putative chromate transporter; chromate transporter 2541267..2541914 Serratia proteamaculans 568 5604160 YP_001478557.1 CDS Spro_2328 NC_009832.1 2541911 2542432 D PFAM: Chromate transporter; KEGG: bxe:Bxe_B2837 chromate transporter; chromate transporter 2541911..2542432 Serratia proteamaculans 568 5604161 YP_001478558.1 CDS Spro_2329 NC_009832.1 2542473 2542889 R PFAM: metalloprotease inhibitor I38; KEGG: eca:ECA2784 protease inhibitor; metalloprotease inhibitor I38 complement(2542473..2542889) Serratia proteamaculans 568 5604162 YP_001478559.1 CDS Spro_2330 NC_009832.1 2543161 2543895 D KEGG: rso:RSc1273 putative lipoprotein; putative lipoprotein 2543161..2543895 Serratia proteamaculans 568 5604154 YP_001478560.1 CDS Spro_2331 NC_009832.1 2543879 2544379 R PFAM: GCN5-related N-acetyltransferase; KEGG: pcr:Pcryo_1332 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase complement(2543879..2544379) Serratia proteamaculans 568 5604155 YP_001478561.1 CDS Spro_2332 NC_009832.1 2544409 2545416 R PFAM: alpha/beta hydrolase fold; KEGG: pst:PSPTO_3264 hydrolase, alpha/beta fold family; alpha/beta hydrolase fold domain-containing protein complement(2544409..2545416) Serratia proteamaculans 568 5604156 YP_001478562.1 CDS Spro_2333 NC_009832.1 2545643 2547247 R PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; KEGG: bch:Bcen2424_4610 glucose-methanol-choline oxidoreductase; glucose-methanol-choline oxidoreductase complement(2545643..2547247) Serratia proteamaculans 568 5604070 YP_001478563.1 CDS Spro_2334 NC_009832.1 2547267 2547785 R KEGG: bch:Bcen2424_4611 hypothetical protein; hypothetical protein complement(2547267..2547785) Serratia proteamaculans 568 5604071 YP_001478564.1 CDS Spro_2335 NC_009832.1 2547796 2549076 R PFAM: cytochrome c class I; KEGG: bch:Bcen2424_4612 cytochrome c, class I; gluconate 2-dehydrogenase complement(2547796..2549076) Serratia proteamaculans 568 5604072 YP_001478565.1 CDS Spro_2336 NC_009832.1 2549298 2550203 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: yen:YE1742 putative inner membrane protein; hypothetical protein complement(2549298..2550203) Serratia proteamaculans 568 5604059 YP_001478566.1 CDS Spro_2337 NC_009832.1 2550381 2551250 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: yen:YE1743 putative AraC-family transcriptional regulatory protein; AraC family transcriptional regulator 2550381..2551250 Serratia proteamaculans 568 5604060 YP_001478567.1 CDS Spro_2338 NC_009832.1 2551269 2551706 D KEGG: eca:ECA2819 hypothetical protein; hypothetical protein 2551269..2551706 Serratia proteamaculans 568 5604061 YP_001478568.1 CDS Spro_2339 NC_009832.1 2551714 2552934 R PFAM: major facilitator superfamily MFS_1; KEGG: sgl:SG0019 putative transport protein; major facilitator transporter complement(2551714..2552934) Serratia proteamaculans 568 5604021 YP_001478569.1 CDS Spro_2340 NC_009832.1 2553060 2554274 R KEGG: eca:ECA2249 hypothetical protein; hypothetical protein complement(2553060..2554274) Serratia proteamaculans 568 5604022 YP_001478570.1 CDS Spro_2341 NC_009832.1 2554267 2555097 R catalyzes the hydrolysis of mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate; mannosyl-3-phosphoglycerate phosphatase complement(2554267..2555097) Serratia proteamaculans 568 5604023 YP_001478571.1 CDS Spro_2342 NC_009832.1 2555329 2555661 R KEGG: eca:ECA2241 hypothetical protein; hypothetical protein complement(2555329..2555661) Serratia proteamaculans 568 5603909 YP_001478572.1 CDS Spro_2343 NC_009832.1 2555684 2555917 R PFAM: protein of unknown function DUF172; KEGG: ypi:YpsIP31758_2237 prevent-host-death family protein; hypothetical protein complement(2555684..2555917) Serratia proteamaculans 568 5603910 YP_001478573.1 CDS Spro_2344 NC_009832.1 2556031 2556912 D PFAM: GCN5-related N-acetyltransferase; KEGG: aav:Aave_2184 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase 2556031..2556912 Serratia proteamaculans 568 5603911 YP_001478574.1 CDS Spro_2345 NC_009832.1 2557159 2558031 D KEGG: bte:BTH_II1440 hypothetical protein; RpiR family transcriptional regulator 2557159..2558031 Serratia proteamaculans 568 5603868 YP_001478575.1 CDS Spro_2346 NC_009832.1 2558061 2558624 D catalyzes the hydrolysis of D-alanyl-D-alanine dipeptide: Zn dependent; involved in peptidoglycan synthesis; D-alanyl-D-alanine dipeptidase 2558061..2558624 Serratia proteamaculans 568 5603869 YP_001478576.1 CDS Spro_2347 NC_009832.1 2558660 2560210 D PFAM: extracellular solute-binding protein family 5; KEGG: ecs:ECs2091 putative hemin-binding lipoprotein; extracellular solute-binding protein 2558660..2560210 Serratia proteamaculans 568 5603870 YP_001478577.1 CDS Spro_2348 NC_009832.1 2560397 2561413 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sbo:SBO_1571 putative transport system permease protein; binding-protein-dependent transport systems inner membrane component 2560397..2561413 Serratia proteamaculans 568 5603691 YP_001478578.1 CDS Spro_2349 NC_009832.1 2561419 2562306 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ecs:ECs2089 putative transport protein; ATP-dependent peptide transporter membrane subunit 2561419..2562306 Serratia proteamaculans 568 5603692 YP_001478579.1 CDS Spro_2350 NC_009832.1 2562306 2563310 D KEGG: ecj:JW1479 D-Ala-D-Ala transporter subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 2562306..2563310 Serratia proteamaculans 568 5603693 YP_001478580.1 CDS Spro_2351 NC_009832.1 2563300 2564247 D KEGG: ecs:ECs2087 putative ATP-binding component of a transport system; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 2563300..2564247 Serratia proteamaculans 568 5603640 YP_001478581.1 CDS Spro_2352 NC_009832.1 2564260 2565048 R TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; KEGG: ypi:YpsIP31758_1025 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase; acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase complement(2564260..2565048) Serratia proteamaculans 568 5603641 YP_001478582.1 CDS Spro_2353 NC_009832.1 2565279 2566868 R PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B0529 major facilitator superfamily (MFS) efflux pump; major facilitator transporter complement(2565279..2566868) Serratia proteamaculans 568 5603642 YP_001478583.1 CDS Spro_2354 NC_009832.1 2566924 2567790 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rpe:RPE_2870 transcriptional regulator, LysR family; LysR family transcriptional regulator 2566924..2567790 Serratia proteamaculans 568 5603635 YP_001478584.1 CDS Spro_2355 NC_009832.1 2567798 2568079 R KEGG: kpn:KPN_04460 hypothetical protein; hypothetical protein complement(2567798..2568079) Serratia proteamaculans 568 5603636 YP_001478585.1 CDS Spro_2356 NC_009832.1 2568363 2570288 D PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: kpn:KPN_01815 cell elongation, e phase; peptidoglycan synthetase; penicillin-binding protein 2; peptidoglycan glycosyltransferase 2568363..2570288 Serratia proteamaculans 568 5603637 YP_001478586.1 CDS Spro_2357 NC_009832.1 2570391 2572109 D PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: yen:YE1767 peptidoglycan synthetase; peptidoglycan glycosyltransferase 2570391..2572109 Serratia proteamaculans 568 5603556 YP_001478587.1 CDS Spro_2358 NC_009832.1 2572144 2573382 R KEGG: pae:PA3497 hypothetical protein; hypothetical protein complement(2572144..2573382) Serratia proteamaculans 568 5603557 YP_001478588.1 CDS Spro_2359 NC_009832.1 2573825 2574037 R KEGG: stm:STM1705 osmotically inducible lipoprotein; osmotically inducible lipoprotein complement(2573825..2574037) Serratia proteamaculans 568 5603558 YP_001478589.1 CDS Spro_2360 NC_009832.1 2575334 2575459 D KEGG: sfv:SFV_0578 hypothetical protein; hypothetical protein 2575334..2575459 Serratia proteamaculans 568 5603054 YP_001478590.1 CDS Spro_2361 NC_009832.1 2575497 2576258 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA0854 ABC transporter, ATP-binding protein; ABC transporter-like protein complement(2575497..2576258) Serratia proteamaculans 568 5603055 YP_001478591.1 CDS Spro_2362 NC_009832.1 2576255 2577172 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA0855 ABC transporter permease protein; polar amino acid ABC transporter inner membrane subunit complement(2576255..2577172) Serratia proteamaculans 568 5603041 YP_001478592.1 CDS Spro_2363 NC_009832.1 2577169 2578083 R PFAM: extracellular solute-binding protein family 3; KEGG: eca:ECA0856 ABC transporter, periplasmic binding protein; extracellular solute-binding protein complement(2577169..2578083) Serratia proteamaculans 568 5603042 YP_001478593.1 CDS Spro_2364 NC_009832.1 2578100 2579437 R KEGG: ava:Ava_1266 xenobiotic compound monooxygenase, DszA family, A subunit; xenobiotic compound monooxygenase subunit A complement(2578100..2579437) Serratia proteamaculans 568 5603043 YP_001478594.1 CDS Spro_2365 NC_009832.1 2579455 2580774 R PFAM: MmgE/PrpD family protein; KEGG: eca:ECA3784 hypothetical protein; MmgE/PrpD family protein complement(2579455..2580774) Serratia proteamaculans 568 5603023 YP_001478595.1 CDS Spro_2366 NC_009832.1 2581039 2581902 R KEGG: bpe:BP0300 putative esterase; putative esterase complement(2581039..2581902) Serratia proteamaculans 568 5603024 YP_001478596.1 CDS Spro_2367 NC_009832.1 2582084 2583520 D PFAM: major facilitator superfamily MFS_1; KEGG: pol:Bpro_0977 major facilitator superfamily MFS_1; major facilitator transporter 2582084..2583520 Serratia proteamaculans 568 5603025 YP_001478597.1 CDS Spro_2368 NC_009832.1 2583499 2583900 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: atc:AGR_L_1189 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase complement(2583499..2583900) Serratia proteamaculans 568 5602941 YP_001478598.1 CDS Spro_2369 NC_009832.1 2583982 2585229 R KEGG: ent:Ent638_1138 hypothetical protein; hypothetical protein complement(2583982..2585229) Serratia proteamaculans 568 5602942 YP_001478599.1 CDS Spro_2370 NC_009832.1 2585242 2586315 R KEGG: eca:ECA1405 putative exported protein; hypothetical protein complement(2585242..2586315) Serratia proteamaculans 568 5602943 YP_001478600.1 CDS Spro_2371 NC_009832.1 2586539 2587627 D member of the iron-containing alcohol dehydrogenase family; unknown function; hypothetical protein 2586539..2587627 Serratia proteamaculans 568 5602903 YP_001478601.1 CDS Spro_2372 NC_009832.1 2587670 2588689 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KR domain protein; KEGG: ppu:PP_2986 oxidoreductase, putative; NAD-dependent epimerase/dehydratase complement(2587670..2588689) Serratia proteamaculans 568 5602904 YP_001478602.1 CDS Spro_2373 NC_009832.1 2588814 2589431 D PFAM: regulatory protein TetR; KEGG: bur:Bcep18194_B1225 transcriptional regulator, TetR family; TetR family transcriptional regulator 2588814..2589431 Serratia proteamaculans 568 5602905 YP_001478603.1 CDS Spro_2374 NC_009832.1 2589439 2590860 R hypothetical protein complement(2589439..2590860) Serratia proteamaculans 568 5602851 YP_001478604.1 CDS Spro_2375 NC_009832.1 2590841 2592757 R hypothetical protein complement(2590841..2592757) Serratia proteamaculans 568 5602852 YP_001478605.1 CDS Spro_2376 NC_009832.1 2592768 2594432 R KEGG: rru:Rru_A1375 hypothetical protein; hypothetical protein complement(2592768..2594432) Serratia proteamaculans 568 5602853 YP_001478606.1 CDS Spro_2377 NC_009832.1 2594442 2596277 R hypothetical protein complement(2594442..2596277) Serratia proteamaculans 568 5602758 YP_001478607.1 CDS Spro_2378 NC_009832.1 2596344 2598485 R KEGG: rru:Rru_A1377 hypothetical protein; hypothetical protein complement(2596344..2598485) Serratia proteamaculans 568 5602759 YP_001478608.1 CDS Spro_2379 NC_009832.1 2598507 2599931 R hypothetical protein complement(2598507..2599931) Serratia proteamaculans 568 5602760 YP_001478609.1 CDS Spro_2380 NC_009832.1 2599928 2601679 R hypothetical protein complement(2599928..2601679) Serratia proteamaculans 568 5602680 YP_001478610.1 CDS Spro_2381 NC_009832.1 2601683 2603284 R SMART: Hedgehog/intein hint domain protein; KEGG: plu:plu1731 hypothetical protein; hedgehog/intein hint domain-containing protein complement(2601683..2603284) Serratia proteamaculans 568 5602681 YP_001478611.1 CDS Spro_2382 NC_009832.1 2603374 2603790 R hypothetical protein complement(2603374..2603790) Serratia proteamaculans 568 5602682 YP_001478612.1 CDS Spro_2383 NC_009832.1 2604484 2604678 R PFAM: CopG domain protein DNA-binding domain protein; KEGG: csa:Csal_1436 helix-turn-helix protein, CopG; CopG/DNA-binding domain-containing protein complement(2604484..2604678) Serratia proteamaculans 568 5602601 YP_001478613.1 CDS Spro_2384 NC_009832.1 2604735 2605523 R KEGG: maq:Maqu_2906 conserved hypothetical spermidine synthase; spermidine synthase-like protein complement(2604735..2605523) Serratia proteamaculans 568 5602602 YP_001478614.1 CDS Spro_2385 NC_009832.1 2605560 2606015 R PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: asa:ASA_3149 (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ complement(2605560..2606015) Serratia proteamaculans 568 5602603 YP_001478615.1 CDS Spro_2386 NC_009832.1 2606268 2606762 R PFAM: conserved hypothetical protein; KEGG: ecc:c3738 hypothetical protein; hypothetical protein complement(2606268..2606762) Serratia proteamaculans 568 5602552 YP_001478616.1 CDS Spro_2387 NC_009832.1 2607072 2608544 D KEGG: eca:ECA2785 metalloprotease; PFAM: Hemolysin-type calcium-binding region; peptidase M10A and M12B matrixin and adamalysin; Peptidase M10 serralysin; SMART: peptidase metallopeptidase; serralysin 2607072..2608544 Serratia proteamaculans 568 5602553 YP_001478617.1 CDS Spro_2388 NC_009832.1 2608589 2610058 R PFAM: membrane attack complex component/perforin/complement C9; KEGG: cmi:CMM_2382 hypothetical protein, putative perforin; membrane attack complex component/perforin/complement C9 complement(2608589..2610058) Serratia proteamaculans 568 5602554 YP_001478618.1 CDS Spro_2389 NC_009832.1 2610593 2611024 R KEGG: ecv:APECO1_2952 arsenate reductase ArsC; TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; arsenate reductase complement(2610593..2611024) Serratia proteamaculans 568 5602546 YP_001478619.1 CDS Spro_2390 NC_009832.1 2611037 2612326 R TIGRFAM: arsenical pump membrane protein; PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: ent:Ent638_4256 arsenical pump membrane protein; arsenical pump membrane protein complement(2611037..2612326) Serratia proteamaculans 568 5602547 YP_001478620.1 CDS Spro_2391 NC_009832.1 2612372 2612692 R regulates the expression of of the arsRBC involved in resistance to arsenic; DNA-binding transcriptional repressor ArsR complement(2612372..2612692) Serratia proteamaculans 568 5602548 YP_001478621.1 CDS Spro_2392 NC_009832.1 2612844 2614802 R PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: PAS domain containing protein; AAA ATPase; KEGG: psp:PSPPH_2337 sigma-54 dependent transcriptional regulator; PAS modulated sigma54 specific transcriptional regulator complement(2612844..2614802) Serratia proteamaculans 568 5602531 YP_001478622.1 CDS Spro_2393 NC_009832.1 2614995 2616011 D PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: pst:PSPTO_3047 myo-inositol 2-dehydrogenase, putative; inositol 2-dehydrogenase 2614995..2616011 Serratia proteamaculans 568 5602532 YP_001478623.1 CDS Spro_2394 NC_009832.1 2616011 2616790 D PFAM: Xylose isomerase domain protein TIM barrel; KEGG: psp:PSPPH_2335 AP endonuclease, family 2 superfamily; xylose isomerase domain-containing protein 2616011..2616790 Serratia proteamaculans 568 5602533 YP_001478624.1 CDS Spro_2395 NC_009832.1 2616884 2617807 D PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: kpn:KPN_00509 putative periplasmic binding protein; periplasmic binding protein/LacI transcriptional regulator 2616884..2617807 Serratia proteamaculans 568 5602506 YP_001478625.1 CDS Spro_2396 NC_009832.1 2618011 2618772 D PFAM: amidinotransferase; KEGG: yen:YE2045 putative hydrolase; dimethylargininase 2618011..2618772 Serratia proteamaculans 568 5602507 YP_001478626.1 CDS Spro_2397 NC_009832.1 2618800 2619573 D PFAM: extracellular solute-binding protein family 3; KEGG: yen:YE2044 amino acid-binding periplasmic protein precursor; extracellular solute-binding protein 2618800..2619573 Serratia proteamaculans 568 5607436 YP_001478627.1 CDS Spro_2398 NC_009832.1 2619610 2620302 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yen:YE2043 amino acid transport system permease protein; polar amino acid ABC transporter inner membrane subunit 2619610..2620302 Serratia proteamaculans 568 5607437 YP_001478628.1 CDS Spro_2399 NC_009832.1 2620302 2621024 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cvi:CV_3087 histidine transport system membrane protein M; polar amino acid ABC transporter inner membrane subunit 2620302..2621024 Serratia proteamaculans 568 5607438 YP_001478629.1 CDS Spro_2400 NC_009832.1 2621031 2621486 R PFAM: regulatory protein AsnC/Lrp family; KEGG: yen:YE2040 probable leucine-responsive regulatory protein; AsnC family transcriptional regulator complement(2621031..2621486) Serratia proteamaculans 568 5602856 YP_001478630.1 CDS Spro_2401 NC_009832.1 2621501 2622607 D PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: yen:YE2039 hypothetical protein; succinylglutamate desuccinylase/aspartoacylase 2621501..2622607 Serratia proteamaculans 568 5602857 YP_001478631.1 CDS Spro_2402 NC_009832.1 2622924 2624678 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: maq:Maqu_0009 ABC transporter related; ABC transporter-like protein 2622924..2624678 Serratia proteamaculans 568 5602858 YP_001478632.1 CDS Spro_2403 NC_009832.1 2625325 2626338 D similar to zinc-dependent eukaryotic ADH enzymes and distinct from fermentative ADHs; alcohol dehydrogenase 2625325..2626338 Serratia proteamaculans 568 5604475 YP_001478633.1 CDS Spro_2404 NC_009832.1 2626393 2626875 R PFAM: regulatory protein LuxR; KEGG: gme:Gmet_2158 two component transcriptional regulator, LuxR family; LuxR family transcriptional regulator complement(2626393..2626875) Serratia proteamaculans 568 5604476 YP_001478634.1 CDS Spro_2405 NC_009832.1 2626940 2627515 R hypothetical protein complement(2626940..2627515) Serratia proteamaculans 568 5604477 YP_001478635.1 CDS Spro_2406 NC_009832.1 2627530 2629968 R PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: bch:Bcen2424_1755 fimbrial biogenesis outer membrane usher protein; fimbrial biogenesis outer membrane usher protein complement(2627530..2629968) Serratia proteamaculans 568 5603643 YP_001478636.1 CDS Spro_2407 NC_009832.1 2629979 2630683 R member of the periplasmic pilus chaperone family of proteins; putative periplasmic chaperone protein complement(2629979..2630683) Serratia proteamaculans 568 5603644 YP_001478637.1 CDS Spro_2408 NC_009832.1 2630786 2631538 R PFAM: protein of unknown function DUF1120; KEGG: bch:Bcen2424_1753 protein of unknown function DUF1120; hypothetical protein complement(2630786..2631538) Serratia proteamaculans 568 5603645 YP_001478638.1 CDS Spro_2409 NC_009832.1 2631924 2632517 R PFAM: integrase family protein; KEGG: ecv:APECO1_1681 hypothetical protein; integrase family protein complement(2631924..2632517) Serratia proteamaculans 568 5602588 YP_001478639.1 CDS Spro_2410 NC_009832.1 2632638 2634158 R PFAM: aldehyde dehydrogenase; KEGG: pae:PA4022 probable aldehyde dehydrogenase; aldehyde dehydrogenase complement(2632638..2634158) Serratia proteamaculans 568 5602589 YP_001478640.1 CDS Spro_2411 NC_009832.1 2634438 2636225 D PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; SMART: AAA ATPase; KEGG: kpn:KPN_02992 putative helix-turn-helix, fis-type; Fis family GAF modulated sigma54 specific transcriptional regulator 2634438..2636225 Serratia proteamaculans 568 5602590 YP_001478641.1 CDS Spro_2412 NC_009832.1 2636269 2637195 R PFAM: extracellular solute-binding protein family 3; KEGG: eca:ECA2156 ABC transporter, substrate binding protein; extracellular solute-binding protein complement(2636269..2637195) Serratia proteamaculans 568 5603154 YP_001478642.1 CDS Spro_2413 NC_009832.1 2637345 2639867 R TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper ion binding protein; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: atc:AGR_C_2202 copper-transporting ATPase; heavy metal translocating P-type ATPase complement(2637345..2639867) Serratia proteamaculans 568 5603155 YP_001478643.1 CDS Spro_2414 NC_009832.1 2639927 2642020 R TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; KEGG: acb:A1S_1949 putative diguanylate cyclase/phosphodiesterase; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase complement(2639927..2642020) Serratia proteamaculans 568 5603156 YP_001478644.1 CDS Spro_2415 NC_009832.1 2642299 2644734 R PFAM: Pyrrolo-quinoline quinone; KEGG: atc:AGR_L_2936 probable quinate dehydrogenase; Pyrrolo-quinoline quinone complement(2642299..2644734) Serratia proteamaculans 568 5603209 YP_001478645.1 CDS Spro_2416 NC_009832.1 2645132 2646649 D PFAM: alpha/beta hydrolase fold; TAP domain protein; KEGG: atu:Atu2171 hydrolase; TAP domain-containing protein 2645132..2646649 Serratia proteamaculans 568 5603210 YP_001478646.1 CDS Spro_2417 NC_009832.1 2646923 2647843 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: kpn:KPN_03313 putative bacterial regulatory protein, LysR; LysR family transcriptional regulator complement(2646923..2647843) Serratia proteamaculans 568 5603211 YP_001478647.1 CDS Spro_2418 NC_009832.1 2647945 2649417 R PFAM: Pyridoxal-dependent decarboxylase; KEGG: eca:ECA2244 L-2,4-diaminobutyrate decarboxylase; pyridoxal-dependent decarboxylase complement(2647945..2649417) Serratia proteamaculans 568 5603793 YP_001478648.1 CDS Spro_2419 NC_009832.1 2649423 2650817 R catalyzes the reversible formation of diaminobutyrate and 2-oxoglutarate from glutamate and L-aspartic beta-semialdehyde; diaminobutyrate--2-oxoglutarate aminotransferase complement(2649423..2650817) Serratia proteamaculans 568 5603794 YP_001478649.1 CDS Spro_2420 NC_009832.1 2651424 2653298 D KEGG: aha:AHA_3686 histidine kinase-response regulator hybrid protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase 2651424..2653298 Serratia proteamaculans 568 5603795 YP_001478650.1 CDS Spro_2421 NC_009832.1 2653376 2653708 R hypothetical protein complement(2653376..2653708) Serratia proteamaculans 568 5604622 YP_001478651.1 CDS Spro_2422 NC_009832.1 2654251 2655282 R TIGRFAM: high-affinity nickel-transporter; KEGG: plu:plu2170 putative high-affinity nickel-transport protein; high-affinity nickel-transporter complement(2654251..2655282) Serratia proteamaculans 568 5604623 YP_001478652.1 CDS Spro_2423 NC_009832.1 2655284 2657581 R TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: acylphosphatase; SUA5/yciO/yrdC domain; zinc finger HypF domain protein; KEGG: yen:YE3600 hydrogenase maturation protein; (NiFe) hydrogenase maturation protein HypF complement(2655284..2657581) Serratia proteamaculans 568 5604624 YP_001478653.1 CDS Spro_2424 NC_009832.1 2657681 2659837 R TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: kpn:KPN_02090 formate dehydrogenase H, selenopolypeptide subunit; formate dehydrogenase subunit alpha complement(2657681..2659837) Serratia proteamaculans 568 5604112 YP_001478654.1 CDS Spro_2425 NC_009832.1 2659849 2660391 R involved in electron transport from formate to hydrogen; electron transport protein HydN complement(2659849..2660391) Serratia proteamaculans 568 5604113 YP_001478655.1 CDS hycI NC_009832.1 2660554 2661024 R involved in the C-terminal processing of the large subunit of hydrogenase 3 HycE; hydrogenase 3 maturation protease complement(2660554..2661024) Serratia proteamaculans 568 5604114 YP_001478656.1 CDS Spro_2427 NC_009832.1 2661017 2661433 R PFAM: formate hydrogenlyase maturation HycH; KEGG: kpn:KPN_03055 processing of HycE (part of the FHL complex); formate hydrogenlyase maturation HycH complement(2661017..2661433) Serratia proteamaculans 568 5602785 YP_001478657.1 CDS Spro_2428 NC_009832.1 2661430 2662227 R PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: ent:Ent638_3192 NADH ubiquinone oxidoreductase, 20 kDa subunit; NADH ubiquinone oxidoreductase 20 kDa subunit complement(2661430..2662227) Serratia proteamaculans 568 5602786 YP_001478658.1 CDS Spro_2429 NC_009832.1 2662224 2662769 R electron transfer protein for hydrogenase-3; the formate hydrogenlyase complex comprises of a formate dehydrogenase, unidentified electron carriers and hydrogenase-3; in this non-energy conserving pathway, molecular hydrogen and carbodioxide are released from formate; formate hydrogenlyase complex iron-sulfur subunit complement(2662224..2662769) Serratia proteamaculans 568 5602787 YP_001478659.1 CDS Spro_2430 NC_009832.1 2662782 2664485 R PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: stm:STM2849 hydrogenase 3 large subunit; NADH dehydrogenase (ubiquinone) 30 kDa subunit complement(2662782..2664485) Serratia proteamaculans 568 5606833 YP_001478660.1 CDS Spro_2431 NC_009832.1 2664508 2665443 R PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: kpn:KPN_03059 hydrogenase 3, membrane subunit (part of FHL complex); respiratory-chain NADH dehydrogenase subunit 1 complement(2664508..2665443) Serratia proteamaculans 568 5606834 YP_001478661.1 CDS Spro_2432 NC_009832.1 2665454 2667322 R PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: spt:SPA2709 NADH dehydrogenase subunit N; NADH dehydrogenase (quinone) complement(2665454..2667322) Serratia proteamaculans 568 5606835 YP_001478662.1 CDS Spro_2433 NC_009832.1 2667322 2667936 R PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: stm:STM2852 hydrogenase-3 iron-sulfur subunit; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein complement(2667322..2667936) Serratia proteamaculans 568 5604543 YP_001478663.1 CDS Spro_2434 NC_009832.1 2668024 2668491 R regulates several genes involved in the formate hydrogenlyase system; seems to prevent binding of FhlA transcriptional activator to the activator sequence of hyc operon; formate hydrogenlyase regulatory protein HycA complement(2668024..2668491) Serratia proteamaculans 568 5604544 YP_001478664.1 CDS hypA NC_009832.1 2668754 2669098 D plays a role in hydrogenase nickel cofactor insertion; hydrogenase nickel incorporation protein 2668754..2669098 Serratia proteamaculans 568 5604148 YP_001478665.1 CDS Spro_2436 NC_009832.1 2669114 2669908 D GTP hydrolase involved in nickel liganding into hydrogenases; hydrogenase nickel incorporation protein HypB 2669114..2669908 Serratia proteamaculans 568 5604149 YP_001478666.1 CDS Spro_2437 NC_009832.1 2669899 2670192 D TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: yen:YE2796 putative hydrogenase isoenzymes formation protein; hydrogenase assembly chaperone HypC/HupF 2669899..2670192 Serratia proteamaculans 568 5604150 YP_001478667.1 CDS Spro_2438 NC_009832.1 2670179 2671306 D TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; KEGG: yen:YE3602 hydrogenase isoenzymes formation protein; hydrogenase expression/formation protein HypD 2670179..2671306 Serratia proteamaculans 568 5602467 YP_001478668.1 CDS Spro_2439 NC_009832.1 2671303 2672316 D TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: sec:SC2791 putative hydrogenase expression/formation protein; hydrogenase expression/formation protein HypE 2671303..2672316 Serratia proteamaculans 568 5602468 YP_001478669.1 CDS Spro_2440 NC_009832.1 2672407 2674473 D PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: sbo:SBO_2789 formate hydrogen-lyase transcriptional activator for FdhF, hyc and hyp operons; NifA subfamily transcriptional regulator 2672407..2674473 Serratia proteamaculans 568 5602469 YP_001478670.1 CDS Spro_2441 NC_009832.1 2674548 2674787 R KEGG: sgl:SGP2_0007 hypothetical protein; hypothetical protein complement(2674548..2674787) Serratia proteamaculans 568 5602558 YP_001478671.1 CDS Spro_2442 NC_009832.1 2674784 2675758 R KEGG: pst:PSPTO_2895 hypothetical protein; hypothetical protein complement(2674784..2675758) Serratia proteamaculans 568 5602559 YP_001478672.1 CDS Spro_2443 NC_009832.1 2675997 2677490 D KEGG: pfl:PFL_2568 sensory box transcriptional regulator, LuxR family; TIGRFAM: PAS sensor protein; PFAM: regulatory protein LuxR; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; LuxR family transcriptional regulator 2675997..2677490 Serratia proteamaculans 568 5602560 YP_001478673.1 CDS Spro_2444 NC_009832.1 2677740 2678636 D TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: aor:AO090102000042 predicted iron-dependent peroxidase; Dyp-type peroxidase family protein 2677740..2678636 Serratia proteamaculans 568 5602609 YP_001478674.1 CDS Spro_2445 NC_009832.1 2678758 2679075 D KEGG: cvi:CV_2052 hypothetical protein; hypothetical protein 2678758..2679075 Serratia proteamaculans 568 5602610 YP_001478675.1 CDS Spro_2446 NC_009832.1 2679446 2679970 D PFAM: protein of unknown function DUF336; KEGG: mpt:Mpe_A1588 hypothetical protein; hypothetical protein 2679446..2679970 Serratia proteamaculans 568 5602611 YP_001478676.1 CDS Spro_2447 NC_009832.1 2680239 2680607 D KEGG: aau:AAur_1002 putative RNase H; putative RNase H 2680239..2680607 Serratia proteamaculans 568 5602646 YP_001478677.1 CDS Spro_2448 NC_009832.1 2680856 2681269 R PFAM: NUDIX hydrolase; KEGG: mms:mma_2565 MutT/NUDIX-family hydrolase; NUDIX hydrolase complement(2680856..2681269) Serratia proteamaculans 568 5602647 YP_001478678.1 CDS Spro_2449 NC_009832.1 2681446 2682501 D PFAM: FAD dependent oxidoreductase; KEGG: pen:PSEEN3588 oxidase; FAD dependent oxidoreductase 2681446..2682501 Serratia proteamaculans 568 5602648 YP_001478679.1 CDS Spro_2450 NC_009832.1 2682554 2683891 R member of the Gnt family of gluconate transporters; not involved in gluconate transport; unknown function; permease DsdX complement(2682554..2683891) Serratia proteamaculans 568 5602809 YP_001478680.1 CDS Spro_2451 NC_009832.1 2684098 2685033 D regulates the synthesis and expression of the dsdXA operon and dadA gene; DNA-binding transcriptional regulator DsdC 2684098..2685033 Serratia proteamaculans 568 5602810 YP_001478681.1 CDS Spro_2452 NC_009832.1 2684993 2685958 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: rso:RSp0505 2-hydroxyacid dehydrogenase; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase complement(2684993..2685958) Serratia proteamaculans 568 5602811 YP_001478682.1 CDS Spro_2453 NC_009832.1 2686301 2686768 D KEGG: plu:plu3520 hypothetical protein; hypothetical protein 2686301..2686768 Serratia proteamaculans 568 5602815 YP_001478683.1 CDS Spro_2454 NC_009832.1 2687015 2689069 D TIGRFAM: TonB-dependent copper receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: plu:plu3519 unnamed protein product; highly similar to outer membrane receptor protein; TonB-dependent copper receptor 2687015..2689069 Serratia proteamaculans 568 5602816 YP_001478684.1 CDS Spro_2455 NC_009832.1 2689145 2690032 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ent:Ent638_0049 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2689145..2690032) Serratia proteamaculans 568 5602817 YP_001478685.1 CDS Spro_2456 NC_009832.1 2690264 2691460 D PFAM: major facilitator superfamily MFS_1; KEGG: ent:Ent638_0048 major facilitator superfamily MFS_1; major facilitator transporter 2690264..2691460 Serratia proteamaculans 568 5602887 YP_001478686.1 CDS Spro_2457 NC_009832.1 2691486 2692499 D KEGG: ent:Ent638_0047 conserved hypothetical signal peptide protein; putative signal peptide protein 2691486..2692499 Serratia proteamaculans 568 5602888 YP_001478687.1 CDS Spro_2458 NC_009832.1 2692646 2693629 D PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: stm:STM1609 TDT family, K+-tellurite ethidium and proflavin transport protein; potassium-tellurite ethidium and proflavin transporter 2692646..2693629 Serratia proteamaculans 568 5602889 YP_001478688.1 CDS Spro_2459 NC_009832.1 2693633 2694529 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bpl:BURPS1106A_A0260 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2693633..2694529) Serratia proteamaculans 568 5602932 YP_001478689.1 CDS Spro_2460 NC_009832.1 2694616 2695392 D PFAM: NAD(P)H dehydrogenase (quinone); KEGG: bxe:Bxe_B2110 NAD(P)H dehydrogenase (quinone); ribosyldihydronicotinamide dehydrogenase (quinone) 2694616..2695392 Serratia proteamaculans 568 5602933 YP_001478690.1 CDS Spro_2461 NC_009832.1 2695427 2696881 R PFAM: FAD linked oxidase domain protein; KEGG: ecv:APECO1_3760 putative FAD containing dehydrogenase; alkylglycerone-phosphate synthase complement(2695427..2696881) Serratia proteamaculans 568 5602934 YP_001478691.1 CDS Spro_2462 NC_009832.1 2696950 2697735 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ecs:ECs3630 putative oxidoreductase; short-chain dehydrogenase/reductase SDR complement(2696950..2697735) Serratia proteamaculans 568 5602950 YP_001478692.1 CDS Spro_2463 NC_009832.1 2698117 2699400 D PFAM: major facilitator superfamily MFS_1; KEGG: ecj:JW2746 predicted transporter; major facilitator transporter 2698117..2699400 Serratia proteamaculans 568 5602951 YP_001478693.1 CDS Spro_2464 NC_009832.1 2699426 2700871 D PFAM: carbohydrate kinase FGGY; KEGG: ecv:APECO1_3757 putative sugar kinase YgcE; carbohydrate kinase FGGY 2699426..2700871 Serratia proteamaculans 568 5602952 YP_001478694.1 CDS Spro_2465 NC_009832.1 2700872 2701441 R PFAM: glycerol-3-phosphate responsive antiterminator; KEGG: ecs:ECs3623 putative anti-terminator regulatory protein; glycerol-3-phosphate responsive antiterminator GlpP complement(2700872..2701441) Serratia proteamaculans 568 5602959 YP_001478695.1 CDS Spro_2466 NC_009832.1 2701535 2702452 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: yps:YPTB2501 putative LysR-family transcriptional regulator; LysR family transcriptional regulator complement(2701535..2702452) Serratia proteamaculans 568 5602960 YP_001478696.1 CDS Spro_2467 NC_009832.1 2702693 2704054 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: ypp:YPDSF_1874 transporter protein; major facilitator transporter 2702693..2704054 Serratia proteamaculans 568 5602961 YP_001478697.1 CDS Spro_2468 NC_009832.1 2704085 2704588 D PFAM: Formaldehyde-activating enzyme (Fae); KEGG: ypi:YpsIP31758_1542 hypothetical protein; formaldehyde-activating protein 2704085..2704588 Serratia proteamaculans 568 5602967 YP_001478698.1 CDS Spro_2469 NC_009832.1 2704599 2705645 D PFAM: aldo/keto reductase; KEGG: ypi:YpsIP31758_1541 oxidoreductase, aldo/keto reductase family; aldo/keto reductase 2704599..2705645 Serratia proteamaculans 568 5602968 YP_001478699.1 CDS Spro_2470 NC_009832.1 2705642 2707093 D TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: yen:YE3793 succinate-semialdehyde dehydrogenase; succinic semialdehyde dehydrogenase 2705642..2707093 Serratia proteamaculans 568 5602969 YP_001478700.1 CDS Spro_2471 NC_009832.1 2707065 2708030 R PFAM: GCN5-related N-acetyltransferase; regulatory protein MarR; KEGG: pfl:PFL_3482 transcriptional regulator, MarR family/acetyl transferase, GNAT family; MarR family transcriptional regulator complement(2707065..2708030) Serratia proteamaculans 568 5602976 YP_001478701.1 CDS Spro_2472 NC_009832.1 2708142 2709599 R PFAM: amino acid permease-associated region; KEGG: plu:plu3105 unnamed protein product; similar to D-serine/D-alanine/glycine transporter; amino acid permease-associated protein complement(2708142..2709599) Serratia proteamaculans 568 5602977 YP_001478702.1 CDS Spro_2473 NC_009832.1 2710219 2711493 D PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: kpn:KPN_01492 putative glutamic dehyrogenase-like protein; Glu/Leu/Phe/Val dehydrogenase 2710219..2711493 Serratia proteamaculans 568 5602978 YP_001478703.1 CDS Spro_2474 NC_009832.1 2711550 2713118 R PFAM: AMP-dependent synthetase and ligase; KEGG: rha:RHA1_ro03779 long-chain-fatty-acid--CoA ligase; AMP-dependent synthetase and ligase complement(2711550..2713118) Serratia proteamaculans 568 5602999 YP_001478704.1 CDS Spro_2475 NC_009832.1 2713304 2713873 D TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: kpn:KPN_01321 putative intracellular protease/amidase; PfpI family intracellular peptidase 2713304..2713873 Serratia proteamaculans 568 5603000 YP_001478705.1 CDS Spro_2476 NC_009832.1 2713959 2714336 R PFAM: protein of unknown function DUF1493; hypothetical protein complement(2713959..2714336) Serratia proteamaculans 568 5603001 YP_001478706.1 CDS Spro_2477 NC_009832.1 2714519 2715973 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: yen:YE0445 probable outer membrane efflux lipoprotein; RND efflux system outer membrane lipoprotein complement(2714519..2715973) Serratia proteamaculans 568 5603002 YP_001478707.1 CDS Spro_2478 NC_009832.1 2715975 2719130 R TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: yen:YE0444 multidrug efflux protein; hydrophobe/amphiphile efflux-1 (HAE1) family protein complement(2715975..2719130) Serratia proteamaculans 568 5603003 YP_001478708.1 CDS Spro_2479 NC_009832.1 2719133 2720287 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: ypi:YpsIP31758_3586 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit complement(2719133..2720287) Serratia proteamaculans 568 5603004 YP_001478709.1 CDS Spro_2480 NC_009832.1 2720436 2721950 R TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: ent:Ent638_0043 drug resistance transporter, EmrB/QacA subfamily; EmrB/QacA family drug resistance transporter complement(2720436..2721950) Serratia proteamaculans 568 5603008 YP_001478710.1 CDS Spro_2481 NC_009832.1 2721994 2722689 D PFAM: regulatory protein TetR; KEGG: bxe:Bxe_B1778 transcriptional regulator, TetR family; TetR family transcriptional regulator 2721994..2722689 Serratia proteamaculans 568 5603009 YP_001478711.1 CDS Spro_2482 NC_009832.1 2722727 2723854 R PFAM: Porphyromonas-type peptidyl-arginine deiminase; KEGG: pen:PSEEN4632 peptidylarginine deiminase, PPADH family; agmatine deiminase complement(2722727..2723854) Serratia proteamaculans 568 5603010 YP_001478712.1 CDS Spro_2483 NC_009832.1 2724002 2724865 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfo:Pfl_2369 transcriptional regulator, LysR family; LysR family transcriptional regulator 2724002..2724865 Serratia proteamaculans 568 5603107 YP_001478713.1 CDS Spro_2484 NC_009832.1 2725018 2726691 D KEGG: pap:PSPA7_4047 gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 2725018..2726691 Serratia proteamaculans 568 5603108 YP_001478714.1 CDS Spro_2485 NC_009832.1 2726739 2728682 R KEGG: xcb:XC_2212 hypothetical protein; hypothetical protein complement(2726739..2728682) Serratia proteamaculans 568 5603394 YP_001478715.1 CDS Spro_2486 NC_009832.1 2728857 2729414 D PFAM: GCN5-related N-acetyltransferase; KEGG: aav:Aave_0714 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase 2728857..2729414 Serratia proteamaculans 568 5603395 YP_001478716.1 CDS Spro_2487 NC_009832.1 2729425 2729994 R PFAM: helix-turn-helix domain protein; KEGG: eca:ECA3650 putative DNA-binding protein; XRE family transcriptional regulator complement(2729425..2729994) Serratia proteamaculans 568 5603396 YP_001478717.1 CDS Spro_2488 NC_009832.1 2730124 2731038 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: eca:ECA3651 hypothetical protein; hypothetical protein 2730124..2731038 Serratia proteamaculans 568 5603431 YP_001478718.1 CDS Spro_2489 NC_009832.1 2731288 2732058 R TIGRFAM: transposase, IS605 OrfB family; PFAM: putative transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB; KEGG: shn:Shewana3_4234 transposase, IS605 OrfB family; IS605 family transposase OrfB complement(2731288..2732058) Serratia proteamaculans 568 5603432 YP_001478719.1 CDS Spro_2490 NC_009832.1 2732434 2733732 R PFAM: cytochrome c class I; KEGG: pae:PA1600 probable cytochrome c; gluconate 2-dehydrogenase complement(2732434..2733732) Serratia proteamaculans 568 5603433 YP_001478720.1 CDS Spro_2491 NC_009832.1 2733729 2736014 R PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: pae:PA1601 probable aldehyde dehydrogenase; aldehyde oxidase and xanthine dehydrogenase complement(2733729..2736014) Serratia proteamaculans 568 5603516 YP_001478721.1 CDS Spro_2492 NC_009832.1 2736011 2736484 R PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: pau:PA14_43780 putative oxidoreductase; 2Fe-2S iron-sulfur cluster binding domain-containing protein complement(2736011..2736484) Serratia proteamaculans 568 5603517 YP_001478722.1 CDS Spro_2493 NC_009832.1 2736818 2738635 R TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: azo:azo0369 probable cysteine desulphurase; SufS subfamily cysteine desulfurase complement(2736818..2738635) Serratia proteamaculans 568 5603518 YP_001478723.1 CDS Spro_2494 NC_009832.1 2738610 2739542 R KEGG: mpt:Mpe_A0024 hypothetical protein; hypothetical protein complement(2738610..2739542) Serratia proteamaculans 568 5603519 YP_001478724.1 CDS Spro_2495 NC_009832.1 2739707 2740477 R KEGG: mpt:Mpe_A0026 serine O-acetyltransferase; Serine O-acetyltransferase complement(2739707..2740477) Serratia proteamaculans 568 5603520 YP_001478725.1 CDS Spro_2496 NC_009832.1 2740722 2741186 R SMART: Rhodanese domain protein; KEGG: mpt:Mpe_A0027 hypothetical protein; rhodanese domain-containing protein complement(2740722..2741186) Serratia proteamaculans 568 5603521 YP_001478726.1 CDS Spro_2497 NC_009832.1 2741548 2742498 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: ypp:YPDSF_1946 D-isomer specific 2-hydroxyacid dehydrogenase family protein; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 2741548..2742498 Serratia proteamaculans 568 5603596 YP_001478727.1 CDS Spro_2498 NC_009832.1 2742592 2743899 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: yps:YPTB2567 putative 2-ketogluconate transporter, ACS family-MFS superfamily; major facilitator transporter 2742592..2743899 Serratia proteamaculans 568 5603597 YP_001478728.1 CDS Spro_2499 NC_009832.1 2743990 2744724 D PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: yen:YE1415 putative LacI-family regulatory protein; RpiR family transcriptional regulator 2743990..2744724 Serratia proteamaculans 568 5603598 YP_001478729.1 CDS Spro_2500 NC_009832.1 2744848 2746284 D PFAM: glycoside hydrolase family 1; KEGG: yen:YE1417 6-phospho-beta-glucosidase; glycoside hydrolase family protein 2744848..2746284 Serratia proteamaculans 568 5603658 YP_001478730.1 CDS Spro_2501 NC_009832.1 2747422 2748150 D TIGRFAM: protocatechuate 3,4-dioxygenase, beta subunit; PFAM: intradiol ring-cleavage dioxygenase; KEGG: kpn:KPN_01948 putative oxidoreductase; protocatechuate 3,4-dioxygenase subunit beta 2747422..2748150 Serratia proteamaculans 568 5603659 YP_001478731.1 CDS Spro_2502 NC_009832.1 2748147 2748773 D KEGG: kpn:KPN_01949 intradiol ring-cleavage dioxygenase; TIGRFAM: protocatechuate 3,4-dioxygenase, alpha subunit; PFAM: intradiol ring-cleavage dioxygenase; protocatechuate 3,4-dioxygenase subunit alpha 2748147..2748773 Serratia proteamaculans 568 5603660 YP_001478732.1 CDS Spro_2503 NC_009832.1 2748819 2749805 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: stm:STM1625 putative transcriptional regulator; LysR family transcriptional regulator 2748819..2749805 Serratia proteamaculans 568 5603672 YP_001478733.1 CDS Spro_2504 NC_009832.1 2749802 2750191 R KEGG: kpn:KPN_01543 putative 4-carboxymuconolactone decarboxylase; TIGRFAM: 4-carboxymuconolactone decarboxylase; PFAM: Carboxymuconolactone decarboxylase; 4-carboxymuconolactone decarboxylase complement(2749802..2750191) Serratia proteamaculans 568 5603673 YP_001478734.1 CDS Spro_2505 NC_009832.1 2750184 2751542 R TIGRFAM: 3-carboxy-cis,cis-muconate cycloisomerase; PFAM: fumarate lyase; KEGG: kpn:KPN_01541 putative fumarate lyase; 3-carboxy-cis,cis-muconate cycloisomerase complement(2750184..2751542) Serratia proteamaculans 568 5603674 YP_001478735.1 CDS Spro_2506 NC_009832.1 2751676 2752854 R catalyzes the formation of protocatechuate from 4-hydroxybenzoate; 4-hydroxybenzoate 3-monooxygenase complement(2751676..2752854) Serratia proteamaculans 568 5603699 YP_001478736.1 CDS Spro_2507 NC_009832.1 2752865 2754220 R TIGRFAM: benzoate transport; PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: kpn:KPN_03917 putative permeases of the major facilitator superfamily; benzoate transport complement(2752865..2754220) Serratia proteamaculans 568 5603700 YP_001478737.1 CDS Spro_2508 NC_009832.1 2754702 2754956 D KEGG: kpn:KPN_01544 hypothetical protein; hypothetical protein 2754702..2754956 Serratia proteamaculans 568 5603701 YP_001478738.1 CDS Spro_2509 NC_009832.1 2755006 2756007 D KEGG: kpn:KPN_04100 hypothetical protein; hypothetical protein 2755006..2756007 Serratia proteamaculans 568 5603781 YP_001478739.1 CDS Spro_2510 NC_009832.1 2756007 2757137 D KEGG: kpn:KPN_04099 putative outer membrane protein; putative outer membrane protein 2756007..2757137 Serratia proteamaculans 568 5603782 YP_001478740.1 CDS Spro_2511 NC_009832.1 2757137 2758255 D KEGG: kpn:KPN_01798 hypothetical protein; hypothetical protein 2757137..2758255 Serratia proteamaculans 568 5603783 YP_001478741.1 CDS Spro_2512 NC_009832.1 2758258 2759616 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: kpn:KPN_00382 general substrate transporter; major facilitator transporter complement(2758258..2759616) Serratia proteamaculans 568 5603787 YP_001478742.1 CDS Spro_2513 NC_009832.1 2760046 2760690 D PFAM: regulatory protein TetR; KEGG: ent:Ent638_0520 transcriptional regulator, TetR family; TetR family transcriptional regulator 2760046..2760690 Serratia proteamaculans 568 5603788 YP_001478743.1 CDS Spro_2514 NC_009832.1 2760714 2761547 D TIGRFAM: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family; PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: kpn:KPN_01537 putative transcriptional repressor (IclR family); IclR family transcriptional regulator 2760714..2761547 Serratia proteamaculans 568 5603789 YP_001478744.1 CDS Spro_2515 NC_009832.1 2761544 2762881 R catalyzes the formation of pyruvate from serine; D-serine dehydratase complement(2761544..2762881) Serratia proteamaculans 568 5603827 YP_001478745.1 CDS Spro_2516 NC_009832.1 2763091 2763561 R PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: mes:Meso_0138 3-demethylubiquinone-9 3-methyltransferase; 3-demethylubiquinone-9 3-methyltransferase complement(2763091..2763561) Serratia proteamaculans 568 5603828 YP_001478746.1 CDS Spro_2517 NC_009832.1 2763574 2763927 R PFAM: protein of unknown function DUF1428; KEGG: ent:Ent638_0929 protein of unknown function DUF1428; hypothetical protein complement(2763574..2763927) Serratia proteamaculans 568 5603829 YP_001478747.1 CDS Spro_2518 NC_009832.1 2764041 2765543 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: pen:PSEEN2260 diguanylate cyclase (GGDEF) domain; diguanylate cyclase complement(2764041..2765543) Serratia proteamaculans 568 5603865 YP_001478748.1 CDS Spro_2519 NC_009832.1 2765821 2766699 R KEGG: pdi:BDI_0439 putative glycosyltransferase; putative glycosyltransferase complement(2765821..2766699) Serratia proteamaculans 568 5603866 YP_001478749.1 CDS Spro_2520 NC_009832.1 2766778 2768055 R KEGG: ypi:YpsIP31758_0711 aerobactin siderophore biosynthesis protein IucD; L-lysine 6-monooxygenase (NADPH) complement(2766778..2768055) Serratia proteamaculans 568 5603867 YP_001478750.1 CDS Spro_2521 NC_009832.1 2768743 2770413 R PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: pin:Ping_2381 alpha-D-1,4-glucosidase; alpha amylase catalytic region complement(2768743..2770413) Serratia proteamaculans 568 5603871 YP_001478751.1 CDS Spro_2522 NC_009832.1 2770435 2771610 R PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rso:RSc2140 probable sugar ATP-binding ABC transporter protein; ABC transporter-like protein complement(2770435..2771610) Serratia proteamaculans 568 5603872 YP_001478752.1 CDS Spro_2523 NC_009832.1 2771616 2772977 R PFAM: glycoside hydrolase family 4; KEGG: mag:amb2735 alpha-galactosidase/6-phospho-beta-glucosidase; glycoside hydrolase family protein complement(2771616..2772977) Serratia proteamaculans 568 5603873 YP_001478753.1 CDS Spro_2524 NC_009832.1 2773009 2773854 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BRA0306 sugar ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component complement(2773009..2773854) Serratia proteamaculans 568 5603886 YP_001478754.1 CDS Spro_2525 NC_009832.1 2773851 2774843 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hch:HCH_00203 ABC-type sugar transport system, permease components; binding-protein-dependent transport systems inner membrane component complement(2773851..2774843) Serratia proteamaculans 568 5603887 YP_001478755.1 CDS Spro_2526 NC_009832.1 2774883 2776148 R PFAM: extracellular solute-binding protein family 1; KEGG: csa:Csal_0258 extracellular solute-binding protein, family 1; extracellular solute-binding protein complement(2774883..2776148) Serratia proteamaculans 568 5603888 YP_001478756.1 CDS Spro_2527 NC_009832.1 2776272 2777204 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ppr:PBPRB0712 hypothetical transcriptional regulator; LysR family transcriptional regulator 2776272..2777204 Serratia proteamaculans 568 5603921 YP_001478757.1 CDS Spro_2528 NC_009832.1 2777601 2780054 R PFAM: MscS Mechanosensitive ion channel; KEGG: yen:YE0322 putative inner-membrane transport protein; mechanosensitive ion channel MscS complement(2777601..2780054) Serratia proteamaculans 568 5603922 YP_001478758.1 CDS Spro_2529 NC_009832.1 2780674 2782389 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ent:Ent638_2048 ABC transporter related; ABC transporter-like protein 2780674..2782389 Serratia proteamaculans 568 5603923 YP_001478759.1 CDS Spro_2530 NC_009832.1 2782441 2783823 R TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: nha:Nham_1450 cation diffusion facilitator family transporter; cation diffusion facilitator family transporter complement(2782441..2783823) Serratia proteamaculans 568 5603927 YP_001478760.1 CDS Spro_2531 NC_009832.1 2784376 2785395 R PFAM: CBS domain containing protein; MgtE integral membrane region; KEGG: kpn:KPN_03856 putative Mg/Co/Ni transporter MgtE; MgtE integral membrane protein complement(2784376..2785395) Serratia proteamaculans 568 5603928 YP_001478761.1 CDS Spro_2532 NC_009832.1 2785921 2786232 R PFAM: transposase IS605 OrfB; KEGG: sfv:SFV_1675 putative virulence protein; DNA (cytosine-5-)-methyltransferase complement(2785921..2786232) Serratia proteamaculans 568 5603929 YP_001478762.1 CDS Spro_2533 NC_009832.1 2786461 2786691 R KEGG: eca:ECA1942 putative periplasmic oligopeptide-binding protein; hypothetical protein complement(2786461..2786691) Serratia proteamaculans 568 5603977 YP_001478763.1 CDS Spro_2534 NC_009832.1 2786990 2788006 D PFAM: extracellular solute-binding protein family 1; KEGG: yen:YE1241 iron(III)-binding periplasmic protein; extracellular solute-binding protein 2786990..2788006 Serratia proteamaculans 568 5603978 YP_001478764.1 CDS Spro_2535 NC_009832.1 2788040 2789623 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yen:YE1240 iron(III)-transport system permease; binding-protein-dependent transport systems inner membrane component 2788040..2789623 Serratia proteamaculans 568 5604067 YP_001478765.1 CDS Spro_2536 NC_009832.1 2789620 2790657 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ypi:YpsIP31758_1348 iron(III) ABC transporter, ATP-binding protein; ABC transporter-like protein 2789620..2790657 Serratia proteamaculans 568 5604068 YP_001478766.1 CDS Spro_2537 NC_009832.1 2790882 2792987 D TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; KEGG: vei:Veis_1261 translation elongation factor G; translation elongation factor G 2790882..2792987 Serratia proteamaculans 568 5604069 YP_001478767.1 CDS Spro_2538 NC_009832.1 2793019 2793984 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: eca:ECA1517 hypothetical protein; hypothetical protein complement(2793019..2793984) Serratia proteamaculans 568 5604142 YP_001478768.1 CDS Spro_2539 NC_009832.1 2794165 2795271 R PFAM: periplasmic binding protein; KEGG: prw:PsycPRwf_0745 periplasmic binding protein; periplasmic binding protein complement(2794165..2795271) Serratia proteamaculans 568 5604143 YP_001478769.1 CDS Spro_2540 NC_009832.1 2795395 2796222 R PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: eca:ECA1518 AraC-family transcriptional regulator; AraC family transcriptional regulator complement(2795395..2796222) Serratia proteamaculans 568 5604144 YP_001478770.1 CDS Spro_2541 NC_009832.1 2796436 2797869 D PFAM: aldehyde dehydrogenase; KEGG: atc:AGR_L_2660 hypothetical protein; aldehyde dehydrogenase 2796436..2797869 Serratia proteamaculans 568 5604151 YP_001478771.1 CDS Spro_2542 NC_009832.1 2798017 2798931 R PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: bur:Bcep18194_B3090 esterase/lipase/thioesterase; alpha/beta hydrolase domain-containing protein complement(2798017..2798931) Serratia proteamaculans 568 5604152 YP_001478772.1 CDS Spro_2543 NC_009832.1 2798921 2799817 R PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_B3091 alpha/beta hydrolase; alpha/beta hydrolase fold domain-containing protein complement(2798921..2799817) Serratia proteamaculans 568 5604153 YP_001478773.1 CDS Spro_2544 NC_009832.1 2799847 2800902 R PFAM: AP endonuclease 2 domain protein; Xylose isomerase domain protein TIM barrel; KEGG: pfl:PFL_3507 AP endonuclease family 2 protein; xylose isomerase domain-containing protein complement(2799847..2800902) Serratia proteamaculans 568 5604166 YP_001478774.1 CDS Spro_2545 NC_009832.1 2801044 2801628 D PFAM: regulatory protein TetR; KEGG: bur:Bcep18194_B3093 transcriptional regulator, TetR family; TetR family transcriptional regulator 2801044..2801628 Serratia proteamaculans 568 5604167 YP_001478775.1 CDS Spro_2546 NC_009832.1 2801629 2801958 R PFAM: Cupin 2 conserved barrel domain protein; KEGG: bur:Bcep18194_B0543 hypothetical protein; cupin 2 domain-containing protein complement(2801629..2801958) Serratia proteamaculans 568 5604168 YP_001478776.1 CDS Spro_2547 NC_009832.1 2802033 2803910 R PFAM: K potassium transporter; KEGG: bra:BRADO1466 potassium transport system, low affinity (KUP family); K potassium transporter complement(2802033..2803910) Serratia proteamaculans 568 5604251 YP_001478777.1 CDS Spro_2548 NC_009832.1 2803982 2804968 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_3505 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2803982..2804968) Serratia proteamaculans 568 5604252 YP_001478778.1 CDS Spro_2549 NC_009832.1 2805063 2806013 D PFAM: inner-membrane translocator; KEGG: bxe:Bxe_A0822 ABC branched chain amino acid family transporter, inner membrane subunit; inner-membrane translocator 2805063..2806013 Serratia proteamaculans 568 5604253 YP_001478779.1 CDS Spro_2550 NC_009832.1 2806023 2807135 D PFAM: inner-membrane translocator; KEGG: rso:RSc2439 probable amino-acid transmembrane ABC transporter protein; inner-membrane translocator 2806023..2807135 Serratia proteamaculans 568 5604330 YP_001478780.1 CDS Spro_2551 NC_009832.1 2807132 2807902 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rme:Rmet_2864 ABC transporter-related protein; ABC transporter-like protein 2807132..2807902 Serratia proteamaculans 568 5604331 YP_001478781.1 CDS Spro_2552 NC_009832.1 2807895 2808608 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bte:BTH_I0788 branched-chain amino acid ABC transporter, ATP-binding protein; ABC transporter-like protein 2807895..2808608 Serratia proteamaculans 568 5604332 YP_001478782.1 CDS Spro_2553 NC_009832.1 2808643 2809803 D PFAM: Extracellular ligand-binding receptor; KEGG: bam:Bamb_3506 extracellular ligand-binding receptor; extracellular ligand-binding receptor 2808643..2809803 Serratia proteamaculans 568 5604348 YP_001478783.1 CDS Spro_2554 NC_009832.1 2809818 2810324 D KEGG: bur:Bcep18194_B1949 hypothetical protein; hypothetical protein 2809818..2810324 Serratia proteamaculans 568 5604349 YP_001478784.1 CDS Spro_2555 NC_009832.1 2810321 2811547 D KEGG: bxe:Bxe_A1427 amidase, hydantoinase/carbamoylase; TIGRFAM: amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20; peptidase dimerisation domain protein; amidase 2810321..2811547 Serratia proteamaculans 568 5604350 YP_001478785.1 CDS Spro_2556 NC_009832.1 2811638 2811985 D PFAM: regulatory protein ArsR; KEGG: mms:mma_1896 transcriptional regulator, ArsR family; ArsR family transcriptional regulator 2811638..2811985 Serratia proteamaculans 568 5604366 YP_001478786.1 CDS Spro_2557 NC_009832.1 2811989 2812522 D PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: mms:mma_1897 hypothetical protein; activator of Hsp90 ATPase 1 family protein 2811989..2812522 Serratia proteamaculans 568 5604367 YP_001478787.1 CDS Spro_2558 NC_009832.1 2812523 2813551 R PFAM: Mg2 transporter protein CorA family protein; KEGG: kpn:KPN_01510 putative Mg2+ and Co2+ transporters; Mg2 transporter protein CorA family protein complement(2812523..2813551) Serratia proteamaculans 568 5604368 YP_001478788.1 CDS Spro_2559 NC_009832.1 2813756 2815366 D PFAM: phosphate transporter; KEGG: pfo:Pfl_4319 phosphate transporter; phosphate transporter 2813756..2815366 Serratia proteamaculans 568 5604378 YP_001478789.1 CDS Spro_2560 NC_009832.1 2815393 2816307 D PFAM: protein of unknown function DUF344; KEGG: bur:Bcep18194_B1834 protein of unknown function DUF344; hypothetical protein 2815393..2816307 Serratia proteamaculans 568 5604379 YP_001478790.1 CDS Spro_2561 NC_009832.1 2816321 2817283 D PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: bxe:Bxe_A1545 peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 2816321..2817283 Serratia proteamaculans 568 5604380 YP_001478791.1 CDS Spro_2562 NC_009832.1 2817440 2818411 D PFAM: luciferase family protein; KEGG: bch:Bcen2424_6567 luciferase family protein; luciferase family protein 2817440..2818411 Serratia proteamaculans 568 5604436 YP_001478792.1 CDS Spro_2563 NC_009832.1 2818422 2819726 R PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: aav:Aave_0017 transcriptional regulator, GntR family; transcriptional regulator complement(2818422..2819726) Serratia proteamaculans 568 5604437 YP_001478793.1 CDS Spro_2564 NC_009832.1 2819795 2820049 D hypothetical protein 2819795..2820049 Serratia proteamaculans 568 5604438 YP_001478794.1 CDS Spro_2565 NC_009832.1 2820046 2820762 D PFAM: glutamine amidotransferase class-I; KEGG: cvi:CV_3746 glutamine amidotransferase; glutamine amidotransferase class-I 2820046..2820762 Serratia proteamaculans 568 5604469 YP_001478795.1 CDS Spro_2566 NC_009832.1 2820763 2821602 D TIGRFAM: pyridoxal kinase; PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: kpn:KPN_02766 pyridoxine kinase; pyridoxal kinase 2820763..2821602 Serratia proteamaculans 568 5604470 YP_001478796.1 CDS Spro_2567 NC_009832.1 2821650 2822363 R PFAM: type IV pilus assembly PilZ; YcgR family protein; KEGG: ent:Ent638_2358 YcgR family protein; YcgR family protein complement(2821650..2822363) Serratia proteamaculans 568 5604471 YP_001478797.1 CDS Spro_2568 NC_009832.1 2822438 2823220 R PFAM: N-formylglutamate amidohydrolase; KEGG: yen:YE2073 hypothetical protein; N-formylglutamate amidohydrolase complement(2822438..2823220) Serratia proteamaculans 568 5604495 YP_001478798.1 CDS Spro_2569 NC_009832.1 2823320 2825041 R PFAM: phospholipid/glycerol acyltransferase; KEGG: eca:ECA4119 putative acyltransferase; phospholipid/glycerol acyltransferase complement(2823320..2825041) Serratia proteamaculans 568 5604496 YP_001478799.1 CDS Spro_2570 NC_009832.1 2825201 2826871 R KEGG: pac:PPA1958 hypothetical protein; hypothetical protein complement(2825201..2826871) Serratia proteamaculans 568 5604497 YP_001478800.1 CDS Spro_2571 NC_009832.1 2827337 2828590 D PFAM: extracellular solute-binding protein family 1; KEGG: cpr:CPR_0476 ABC transporter, substrate-binding protein; extracellular solute-binding protein 2827337..2828590 Serratia proteamaculans 568 5604498 YP_001478801.1 CDS Spro_2572 NC_009832.1 2828672 2829610 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcz:BCZK1635 sugar ABC transporter, permease; binding-protein-dependent transport systems inner membrane component 2828672..2829610 Serratia proteamaculans 568 5604499 YP_001478802.1 CDS Spro_2573 NC_009832.1 2829623 2830441 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcz:BCZK1636 sugar ABC transporter, permease; binding-protein-dependent transport systems inner membrane component 2829623..2830441 Serratia proteamaculans 568 5604500 YP_001478803.1 CDS Spro_2574 NC_009832.1 2830464 2831576 D PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: amt:Amet_0894 ABC transporter related; ABC transporter-like protein 2830464..2831576 Serratia proteamaculans 568 5604513 YP_001478804.1 CDS Spro_2575 NC_009832.1 2831596 2832879 D PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: dre:556929 zgc:154075; oxidoreductase domain-containing protein 2831596..2832879 Serratia proteamaculans 568 5604514 YP_001478805.1 CDS Spro_2576 NC_009832.1 2832884 2833807 D PFAM: ROK family protein; KEGG: pin:Ping_1332 ROK family protein; ROK family protein 2832884..2833807 Serratia proteamaculans 568 5604515 YP_001478806.1 CDS Spro_2577 NC_009832.1 2834140 2834910 D PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: plu:plu0832 putative aga operon transcriptional repressor; DeoR family transcriptional regulator 2834140..2834910 Serratia proteamaculans 568 5604522 YP_001478807.1 CDS Spro_2578 NC_009832.1 2834935 2836101 D TIGRFAM: Sugar isomerase AgaS; PFAM: sugar isomerase (SIS); KEGG: plu:plu0834 putative tagatose-6-phosphate ketose/aldose isomerase; sugar isomerase AgaS 2834935..2836101 Serratia proteamaculans 568 5604523 YP_001478808.1 CDS gatY NC_009832.1 2836111 2836965 D catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1,6-bisphosphate; in enteric bacteria there are two D-tagatose 1,6-bisphosphate-specific aldolases: KbaY (also called AgaY), involved in catabolism of N-acetyl-galactosamine and D-galactosamine, and GatY which is part of the galactitol catabolism pathway; tagatose-bisphosphate aldolase 2836111..2836965 Serratia proteamaculans 568 5604524 YP_001478809.1 CDS Spro_2580 NC_009832.1 2837339 2837599 D hypothetical protein 2837339..2837599 Serratia proteamaculans 568 5604531 YP_001478810.1 CDS Spro_2581 NC_009832.1 2837786 2838382 D KEGG: ypi:YpsIP31758_1834 methylated-DNA--protein-cysteine methyltransferase; TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: methylguanine DNA methyltransferase ribonuclease domain protein; Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; methylated-DNA--protein-cysteine methyltransferase 2837786..2838382 Serratia proteamaculans 568 5604532 YP_001478811.1 CDS Spro_2582 NC_009832.1 2838608 2839372 D Global transcription factor that controls the expression of over 100 target genes in response to anoxia; fumarate/nitrate reduction transcriptional regulator 2838608..2839372 Serratia proteamaculans 568 5604533 YP_001478812.1 CDS Spro_2583 NC_009832.1 2839499 2840461 D with UspC and UspD is involved in resistance to UV irradiation; universal stress protein UspE 2839499..2840461 Serratia proteamaculans 568 5604590 YP_001478813.1 CDS pntB NC_009832.1 2840514 2841908 R catalyzes reversible transfer of hydride ion equivalent between NAD and NADP; membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane; forms a tetramer composed of two alpha and 2 beta subunits; AB-stereospecific enzyme; pyridine nucleotide transhydrogenase complement(2840514..2841908) Serratia proteamaculans 568 5604591 YP_001478814.1 CDS pntA NC_009832.1 2841919 2843448 R forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane; involved in catalyzing transfer of hydride ion equivalents between NAD and NADP; stereospecific (AB-specific); functions as a proton pump by translocating protons from cytoplasm to periplasm; NAD(P) transhydrogenase subunit alpha complement(2841919..2843448) Serratia proteamaculans 568 5604613 YP_001478815.1 CDS Spro_2586 NC_009832.1 2843987 2844937 D PFAM: protein of unknown function DUF1471; KEGG: ypi:YpsIP31758_1829 hypothetical protein; hypothetical protein 2843987..2844937 Serratia proteamaculans 568 5604614 YP_001478816.1 CDS Spro_2587 NC_009832.1 2845183 2846574 D TIGRFAM: arginine/ornithine antiporter; PFAM: amino acid permease-associated region; KEGG: ypi:YpsIP31758_1828 putative arginine/ornithine antiporter ArcD; arginine/ornithine antiporter 2845183..2846574 Serratia proteamaculans 568 5604615 YP_001478817.1 CDS Spro_2588 NC_009832.1 2846604 2847020 R KEGG: ypi:YpsIP31758_1827 hypothetical protein; hypothetical protein complement(2846604..2847020) Serratia proteamaculans 568 5604634 YP_001478818.1 CDS Spro_2589 NC_009832.1 2847148 2847870 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: eca:ECA2018 short chain dehydrogenase; short chain dehydrogenase 2847148..2847870 Serratia proteamaculans 568 5604635 YP_001478819.1 CDS Spro_2590 NC_009832.1 2847908 2848669 D response regulator in two-component regulatory system with RstB; DNA-binding transcriptional regulator RstA 2847908..2848669 Serratia proteamaculans 568 5604636 YP_001478820.1 CDS Spro_2591 NC_009832.1 2848666 2849970 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: ypi:YpsIP31758_1825 sensor protein RstB; sensor protein RstB 2848666..2849970 Serratia proteamaculans 568 5604684 YP_001478821.1 CDS Spro_2592 NC_009832.1 2850037 2851533 D PFAM: peptidase M32 carboxypeptidase Taq metallopeptidase; KEGG: yen:YE2085 putative carboxypeptidase; carboxypeptidase Taq 2850037..2851533 Serratia proteamaculans 568 5604685 YP_001478822.1 CDS Spro_2593 NC_009832.1 2851844 2852125 D KEGG: ecj:JW5826 acid shock-inducible periplasmic protein; acid shock-inducible periplasmic protein 2851844..2852125 Serratia proteamaculans 568 5604686 YP_001478823.1 CDS Spro_2594 NC_009832.1 2852393 2853247 D PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: yen:YE2087 possible protease; peptidase S1 and S6 chymotrypsin/Hap 2852393..2853247 Serratia proteamaculans 568 5604696 YP_001478824.1 CDS Spro_2595 NC_009832.1 2853279 2857166 R involved in the post-transcriptional processing of the daa operon mRNA, which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain; ATP-dependent RNA helicase HrpA complement(2853279..2857166) Serratia proteamaculans 568 5604697 YP_001478825.1 CDS Spro_2596 NC_009832.1 2857436 2858041 D FMN-dependent; requires NADH; catalyzes the cleavage of azo bond in aromatic azo compounds; azoreductase 2857436..2858041 Serratia proteamaculans 568 5604698 YP_001478826.1 CDS Spro_2597 NC_009832.1 2858254 2858577 R PFAM: conserved hypothetical protein; KEGG: yen:YE2095 hypothetical protein; hypothetical protein complement(2858254..2858577) Serratia proteamaculans 568 5604717 YP_001478827.1 CDS Spro_2598 NC_009832.1 2858586 2858783 R KEGG: kpn:KPN_01452 hypothetical protein; hypothetical protein complement(2858586..2858783) Serratia proteamaculans 568 5604718 YP_001478828.1 CDS Spro_2599 NC_009832.1 2858780 2861392 R KEGG: yen:YE2097 hypothetical protein; hypothetical protein complement(2858780..2861392) Serratia proteamaculans 568 5604719 YP_001478829.1 CDS Spro_2600 NC_009832.1 2861949 2862941 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: ypi:YpsIP31758_1808 fermentative lactate dehydrogenase; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 2861949..2862941 Serratia proteamaculans 568 5604767 YP_001478830.1 CDS Spro_2601 NC_009832.1 2862963 2863391 D PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: ypi:YpsIP31758_1807 heat shock protein HslJ; heat-inducible protein 2862963..2863391 Serratia proteamaculans 568 5604768 YP_001478831.1 CDS Spro_2602 NC_009832.1 2863434 2863676 R KEGG: yen:YE2099 putative lipoprotein; putative lipoprotein complement(2863434..2863676) Serratia proteamaculans 568 5604769 YP_001478832.1 CDS Spro_2603 NC_009832.1 2864129 2864461 R PFAM: small multidrug resistance protein; KEGG: yen:YE2101 quaternary ammonium compound-resistance protein; small multidrug resistance protein complement(2864129..2864461) Serratia proteamaculans 568 5604804 YP_001478833.1 CDS Spro_2604 NC_009832.1 2864712 2868245 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: yen:YE2102 putative pyruvate-flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 2864712..2868245 Serratia proteamaculans 568 5604805 YP_001478834.1 CDS Spro_2605 NC_009832.1 2868535 2868957 D PFAM: peptidase S24 and S26 domain protein; KEGG: stm:STM1998 error-prone repair: SOS-response transcriptional repressors (LexA homologs, RecA-mediated autopeptidases); peptidase S24/S26 domain-containing protein 2868535..2868957 Serratia proteamaculans 568 5604806 YP_001478835.1 CDS Spro_2606 NC_009832.1 2868957 2870225 D PFAM: UMUC domain protein DNA-repair protein; KEGG: ecc:c1632 umuC protein; DNA-directed DNA polymerase 2868957..2870225 Serratia proteamaculans 568 5604889 YP_001478836.1 CDS Spro_2607 NC_009832.1 2870353 2871285 D TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs; C32 tRNA thiolase 2870353..2871285 Serratia proteamaculans 568 5604890 YP_001478837.1 CDS Spro_2608 NC_009832.1 2871426 2871824 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: psa:PST_3709 lactoylglutathione lyase; glyoxalase/bleomycin resistance protein/dioxygenase 2871426..2871824 Serratia proteamaculans 568 5604891 YP_001478838.1 CDS zntB NC_009832.1 2872040 2873023 R PFAM: Mg2 transporter protein CorA family protein; KEGG: yen:YE2107 CorA-like Mg2+ transporter protein; zinc transporter complement(2872040..2873023) Serratia proteamaculans 568 5604988 YP_001478839.1 CDS Spro_2610 NC_009832.1 2873169 2874245 D KEGG: aav:Aave_3037 hypothetical protein; hypothetical protein 2873169..2874245 Serratia proteamaculans 568 5604989 YP_001478840.1 CDS Spro_2611 NC_009832.1 2874315 2875949 R PFAM: extracellular solute-binding protein family 5; KEGG: yen:YE2110 putative periplasmic murein peptide-binding protein; extracellular solute-binding protein complement(2874315..2875949) Serratia proteamaculans 568 5604990 YP_001478841.1 CDS Spro_2612 NC_009832.1 2876110 2876460 R hypothetical protein complement(2876110..2876460) Serratia proteamaculans 568 5605020 YP_001478842.1 CDS Spro_2613 NC_009832.1 2876534 2877484 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pap:PSPA7_4415 alcohol dehydrogenase, zinc-binding; alcohol dehydrogenase complement(2876534..2877484) Serratia proteamaculans 568 5605021 YP_001478843.1 CDS Spro_2614 NC_009832.1 2877695 2878402 D PFAM: peptidase M14 carboxypeptidase A; KEGG: yen:YE2111 hypothetical protein; murein peptide amidase A 2877695..2878402 Serratia proteamaculans 568 5605022 YP_001478844.1 CDS Spro_2615 NC_009832.1 2878399 2879379 R PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: yps:YPTB2260 putative mandelate racemase / muconate lactonizing protein; mandelate racemase/muconate lactonizing protein complement(2878399..2879379) Serratia proteamaculans 568 5605041 YP_001478845.1 CDS tpx NC_009832.1 2879603 2880106 D antioxidant activity; thioredoxin-dependent thiol peroxidase; forms homodimers in solution; shows substrate specificity to alkyl hydroperoxides; periplasmic protein; thiol peroxidase 2879603..2880106 Serratia proteamaculans 568 5605042 YP_001478846.1 CDS Spro_2617 NC_009832.1 2880171 2881742 R regulates genes involved in the biosynthesis and transport of aromatic amino acids; DNA-binding transcriptional regulator TyrR complement(2880171..2881742) Serratia proteamaculans 568 5605043 YP_001478847.1 CDS Spro_2618 NC_009832.1 2882073 2883134 R PFAM: conserved hypothetical protein; KEGG: yen:YE2117 hypothetical protein; hypothetical protein complement(2882073..2883134) Serratia proteamaculans 568 5605056 YP_001478848.1 CDS Spro_2619 NC_009832.1 2883131 2884528 R PFAM: protein of unknown function DUF463 YcjX family protein; KEGG: yen:YE2118 hypothetical protein; hypothetical protein complement(2883131..2884528) Serratia proteamaculans 568 5605057 YP_001478849.1 CDS Spro_2620 NC_009832.1 2884979 2886691 D KEGG: gvi:gll4242 unknown protein; hypothetical protein 2884979..2886691 Serratia proteamaculans 568 5605058 YP_001478850.1 CDS Spro_2621 NC_009832.1 2886705 2886968 R TIGRFAM: shock protein PspD; KEGG: ent:Ent638_2166 phage shock protein D; peripheral inner membrane phage-shock protein complement(2886705..2886968) Serratia proteamaculans 568 5605075 YP_001478851.1 CDS Spro_2622 NC_009832.1 2887064 2887423 R with PsbB forms toxin/antitoxin pair; activates the psp operon in response to phage infection, exposure to ethanol or osmotic shock; DNA-binding transcriptional activator PspC complement(2887064..2887423) Serratia proteamaculans 568 5605076 YP_001478852.1 CDS pspB NC_009832.1 2887423 2887650 R acts together with PspC to induce psp operon during infection with phage, exposure to ethanol or osmotic shock; forms a complex with PspA and C; PspC is required for PspAB binding; phage shock protein B complement(2887423..2887650) Serratia proteamaculans 568 5605077 YP_001478853.1 CDS Spro_2624 NC_009832.1 2887708 2888373 R involved in maintaining membrane potential under membrane stress conditions; also acts as a negative transcriptional regulator of the phage shock protein (psp) operon(pspABCDE) by regulating the transcriptional activator PspF; phage shock protein PspA complement(2887708..2888373) Serratia proteamaculans 568 5605217 YP_001478854.1 CDS pspF NC_009832.1 2888558 2889565 D transcriptional activator for pspABCE which are induced in response to phage proteins, membrane altering stresses, and impaired proton expor; phage shock protein operon transcriptional activator 2888558..2889565 Serratia proteamaculans 568 5605218 YP_001478855.1 CDS Spro_2626 NC_009832.1 2889759 2890946 R PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: csa:Csal_0192 cobalamin synthesis protein, P47K; cobalamin synthesis protein P47K complement(2889759..2890946) Serratia proteamaculans 568 5605219 YP_001478856.1 CDS Spro_2627 NC_009832.1 2890959 2891519 R KEGG: pst:PSPTO_2579 carbonic anhydrase-related protein; carbonic anhydrase-like protein complement(2890959..2891519) Serratia proteamaculans 568 5605258 YP_001478857.1 CDS Spro_2628 NC_009832.1 2891509 2892438 R similar protein in Methanocaldococcus converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate as the first step in methanopterin biosynthesis; putative GTP cyclohydrolase complement(2891509..2892438) Serratia proteamaculans 568 5605259 YP_001478858.1 CDS Spro_2629 NC_009832.1 2892644 2894296 D PFAM: extracellular solute-binding protein family 5; KEGG: yen:YE2125 peptide transport periplasmic protein precursor; extracellular solute-binding protein 2892644..2894296 Serratia proteamaculans 568 5605260 YP_001478859.1 CDS Spro_2630 NC_009832.1 2894293 2895258 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yen:YE2126 peptide transport system permease protein; binding-protein-dependent transport systems inner membrane component 2894293..2895258 Serratia proteamaculans 568 5605348 YP_001478860.1 CDS Spro_2631 NC_009832.1 2895245 2896135 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yen:YE2127 peptide transport system permease protein; binding-protein-dependent transport systems inner membrane component 2895245..2896135 Serratia proteamaculans 568 5605349 YP_001478861.1 CDS Spro_2632 NC_009832.1 2896135 2897127 D KEGG: yen:YE2128 peptide transport system ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 2896135..2897127 Serratia proteamaculans 568 5605350 YP_001478862.1 CDS Spro_2633 NC_009832.1 2897129 2897941 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ypi:YpsIP31758_1780 peptide ABC transporter, ATP-binding protein SapF; ABC transporter-like protein 2897129..2897941 Serratia proteamaculans 568 5605370 YP_001478863.1 CDS Spro_2634 NC_009832.1 2898415 2899605 D TIGRFAM: uncharacterized peroxidase-related enzyme; PFAM: Carboxymuconolactone decarboxylase; KEGG: ypi:YpsIP31758_1779 hypothetical protein; peroxidase-like protein 2898415..2899605 Serratia proteamaculans 568 5605371 YP_001478864.1 CDS Spro_2635 NC_009832.1 2899606 2900502 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: yen:YE2132 LysR-family transcriptional regulatory protein; LysR family transcriptional regulator complement(2899606..2900502) Serratia proteamaculans 568 5605395 YP_001478865.1 CDS dacD NC_009832.1 2900583 2901752 R removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors; penicillin-binding protein 6B; one of four, DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains; D-alanyl-D-alanine carboxypeptidase complement(2900583..2901752) Serratia proteamaculans 568 5605396 YP_001478866.1 CDS Spro_2637 NC_009832.1 2902034 2904340 D TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: yen:YE1983 putative oxidoreductase; oxidoreductase alpha (molybdopterin) subunit 2902034..2904340 Serratia proteamaculans 568 5605397 YP_001478867.1 CDS Spro_2638 NC_009832.1 2904549 2906483 D Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction; exoribonuclease II 2904549..2906483 Serratia proteamaculans 568 5605444 YP_001478868.1 CDS Spro_2639 NC_009832.1 2906758 2908815 D PFAM: carbon starvation protein CstA; KEGG: yen:YE1981 putative carbon starvation protein A; carbon starvation protein CstA 2906758..2908815 Serratia proteamaculans 568 5605445 YP_001478869.1 CDS Spro_2640 NC_009832.1 2908898 2909563 R similar to transaldolase from Escherichia coli; many organisms have multiple copies; fructose-6-phosphate aldolase complement(2908898..2909563) Serratia proteamaculans 568 5605446 YP_001478870.1 CDS Spro_2641 NC_009832.1 2909710 2910609 D KEGG: yen:YE0645 putative pyruvate formate-lyase 3 activating enzyme; TIGRFAM: glycyl-radical enzyme activating protein family; PFAM: Radical SAM domain protein; glycyl-radical activating family protein 2909710..2910609 Serratia proteamaculans 568 5605494 YP_001478871.1 CDS Spro_2642 NC_009832.1 2910614 2913046 D KEGG: yen:YE0646 putative formate acetyltransferase; TIGRFAM: pyruvate formate-lyase; PFAM: formate C-acetyltransferase glycine radical; pyruvate formate-lyase PFL; pyruvate formate-lyase 2910614..2913046 Serratia proteamaculans 568 5605495 YP_001478872.1 CDS Spro_2643 NC_009832.1 2913095 2913841 D PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: sec:SC1699 putative regulatory protein, DeoR family; DeoR family transcriptional regulator 2913095..2913841 Serratia proteamaculans 568 5605496 YP_001478873.1 CDS araD NC_009832.1 2913890 2914585 R catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source; L-ribulose-5-phosphate 4-epimerase complement(2913890..2914585) Serratia proteamaculans 568 5605531 YP_001478874.1 CDS Spro_2645 NC_009832.1 2914949 2915167 D KEGG: ypi:YpsIP31758_1911 putative lipoprotein; lipoprotein 2914949..2915167 Serratia proteamaculans 568 5605532 YP_001478875.1 CDS Spro_2646 NC_009832.1 2915359 2915685 R involved in start site selection during the initiation of translation; translation initiation factor Sui1 complement(2915359..2915685) Serratia proteamaculans 568 5605533 YP_001478876.1 CDS Spro_2647 NC_009832.1 2915696 2916451 R type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase complement(2915696..2916451) Serratia proteamaculans 568 5605537 YP_001478877.1 CDS Spro_2648 NC_009832.1 2916753 2917013 D PFAM: protein of unknown function DUF1471; KEGG: kpn:KPN_00833 hypothetical protein; hypothetical protein 2916753..2917013 Serratia proteamaculans 568 5605538 YP_001478878.1 CDS Spro_2649 NC_009832.1 2917183 2917479 D KEGG: ypi:YpsIP31758_1914 hypothetical protein; hypothetical protein 2917183..2917479 Serratia proteamaculans 568 5605539 YP_001478879.1 CDS Spro_2650 NC_009832.1 2917534 2918703 R PFAM: Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: yen:YE1968 hypothetical protein; tetratricopeptide repeat-containing protein complement(2917534..2918703) Serratia proteamaculans 568 5605540 YP_001478880.1 CDS Spro_2651 NC_009832.1 2918710 2919012 R PFAM: protein of unknown function DUF1049; KEGG: ypm:YP_2023 hypothetical protein; hypothetical protein complement(2918710..2919012) Serratia proteamaculans 568 5605541 YP_001478881.1 CDS Spro_2652 NC_009832.1 2919474 2920247 R PFAM: phosphoesterase PA-phosphatase related; KEGG: eca:ECA1944 phosphatidylglycerophosphatase B; phosphatidylglycerophosphatase B complement(2919474..2920247) Serratia proteamaculans 568 5605542 YP_001478882.1 CDS ribA NC_009832.1 2920525 2921118 D catalyzes the conversion of GTP to formate and 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate; GTP cyclohydrolase II 2920525..2921118 Serratia proteamaculans 568 5605669 YP_001478883.1 CDS Spro_2654 NC_009832.1 2921165 2923837 R Catalyzes the conversion of citrate to isocitrate; aconitate hydratase complement(2921165..2923837) Serratia proteamaculans 568 5605670 YP_001478884.1 CDS Spro_2655 NC_009832.1 2924101 2924742 D KEGG: bch:Bcen2424_5419 hypothetical protein; hypothetical protein 2924101..2924742 Serratia proteamaculans 568 5605671 YP_001478885.1 CDS cysB NC_009832.1 2924870 2925844 R LysR-type transcriptional regulator; contains helix-turn-helix (HTH) motif; in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon; autoregulates expression; crystal structure of Klebsiella aerogenes showed tetramer formation; transcriptional regulator CysB complement(2924870..2925844) Serratia proteamaculans 568 5605702 YP_001478886.1 CDS Spro_2657 NC_009832.1 2926204 2928801 R catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I complement(2926204..2928801) Serratia proteamaculans 568 5605703 YP_001478887.1 CDS Spro_2658 NC_009832.1 2929228 2929479 D KEGG: yps:YPTB2139 hypothetical protein; hypothetical protein 2929228..2929479 Serratia proteamaculans 568 5605704 YP_001478888.1 CDS Spro_2659 NC_009832.1 2929525 2930571 R SohB; periplasmic protein; member of the peptidase S49 family; putative periplasmic protease complement(2929525..2930571) Serratia proteamaculans 568 5605718 YP_001478889.1 CDS Spro_2660 NC_009832.1 2930863 2931693 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ypm:YP_2012 short chain dehydrogenase; short chain dehydrogenase 2930863..2931693 Serratia proteamaculans 568 5605719 YP_001478890.1 CDS Spro_2661 NC_009832.1 2931707 2932297 D KEGG: ypi:YpsIP31758_1927 cob(I)alamin adenosyltransferase; TIGRFAM: cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; cob(I)alamin adenosyltransferase 2931707..2932297 Serratia proteamaculans 568 5605720 YP_001478891.1 CDS Spro_2662 NC_009832.1 2932342 2933241 R catalyzes the synthesis of pseudouridine from uracil-2605 in 23S ribosomal RNA; 23S rRNA pseudouridylate synthase B complement(2932342..2933241) Serratia proteamaculans 568 5605733 YP_001478892.1 CDS Spro_2663 NC_009832.1 2933392 2934189 R KEGG: nfa:nfa52190 putative dioxygenase; putative dioxygenase complement(2933392..2934189) Serratia proteamaculans 568 5605734 YP_001478893.1 CDS Spro_2664 NC_009832.1 2934339 2934698 R KEGG: cps:CPS_1624 hypothetical protein; hypothetical protein complement(2934339..2934698) Serratia proteamaculans 568 5605735 YP_001478894.1 CDS Spro_2665 NC_009832.1 2934814 2935434 R TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; KEGG: ypi:YpsIP31758_1929 SUA5/YciO/YrdC/YwlC family protein; hypothetical protein complement(2934814..2935434) Serratia proteamaculans 568 5605845 YP_001478895.1 CDS Spro_2666 NC_009832.1 2935483 2936370 R PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: ypi:YpsIP31758_1930 PHP domain protein; phosphotransferase domain-containing protein complement(2935483..2936370) Serratia proteamaculans 568 5605846 YP_001478896.1 CDS Spro_2667 NC_009832.1 2936743 2938305 D with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I 2936743..2938305 Serratia proteamaculans 568 5605847 YP_001478897.1 CDS Spro_2668 NC_009832.1 2938305 2938886 D TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; anthranilate synthase component II 2938305..2938886 Serratia proteamaculans 568 5605970 YP_001478898.1 CDS trpD NC_009832.1 2938902 2939900 D Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 2938902..2939900 Serratia proteamaculans 568 5605971 YP_001478899.1 CDS Spro_2670 NC_009832.1 2939904 2941265 D monomeric bifunctional protein; functions in tryptophan biosynthesis pathway; phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate; bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase 2939904..2941265 Serratia proteamaculans 568 5605972 YP_001478900.1 CDS Spro_2671 NC_009832.1 2941297 2942487 D catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 2941297..2942487 Serratia proteamaculans 568 5606001 YP_001478901.1 CDS Spro_2672 NC_009832.1 2942487 2943293 D KEGG: ypi:YpsIP31758_1937 tryptophan synthase, alpha subunit; TIGRFAM: tryptophan synthase, alpha subunit; PFAM: tryptophan synthase alpha chain; tryptophan synthase subunit alpha 2942487..2943293 Serratia proteamaculans 568 5606002 YP_001478902.1 CDS Spro_2673 NC_009832.1 2943512 2943826 D PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: ypi:YpsIP31758_1939 putative phospholipid-binding domain protein; transport-associated 2943512..2943826 Serratia proteamaculans 568 5606003 YP_001478903.1 CDS Spro_2674 NC_009832.1 2943874 2944545 R receptor for colicin S4; outer membrane protein W complement(2943874..2944545) Serratia proteamaculans 568 5606118 YP_001478904.1 CDS Spro_2675 NC_009832.1 2944874 2945626 D PFAM: protein of unknown function UPF0259; KEGG: yen:YE2218 hypothetical protein; hypothetical protein 2944874..2945626 Serratia proteamaculans 568 5606119 YP_001478905.1 CDS Spro_2676 NC_009832.1 2945673 2947376 R PFAM: Sulfate transporter/antisigma-factor antagonist STAS; sulphate transporter; KEGG: ypi:YpsIP31758_1943 sulfate permease family protein; sulfate transporter complement(2945673..2947376) Serratia proteamaculans 568 5606120 YP_001478906.1 CDS Spro_2677 NC_009832.1 2947611 2948150 D Involved in cell division; probably involved in intracellular septation; intracellular septation protein A 2947611..2948150 Serratia proteamaculans 568 5606165 YP_001478907.1 CDS Spro_2678 NC_009832.1 2948226 2948654 D YciA; hydrolase that catalyzes the hydrolysis of the thioester bond in palmitoyl-CoA and malonyl-CoA; member of the the acyl coenzyme A hydrolase family of proteins; acyl-CoA thioester hydrolase 2948226..2948654 Serratia proteamaculans 568 5606166 YP_001478908.1 CDS Spro_2679 NC_009832.1 2948906 2949931 D PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: rso:RSc1014 probable transcriptional regulatory DNA-binding repressor transcription regulator protein; LacI family transcription regulator 2948906..2949931 Serratia proteamaculans 568 5606167 YP_001478909.1 CDS Spro_2680 NC_009832.1 2949950 2950918 R PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: slo:Shew_3859 inosine/uridine-preferring nucleoside hydrolase; inosine/uridine-preferring nucleoside hydrolase complement(2949950..2950918) Serratia proteamaculans 568 5606227 YP_001478910.1 CDS Spro_2681 NC_009832.1 2950915 2952132 R PFAM: major facilitator superfamily MFS_1; KEGG: spc:Sputcn32_1658 major facilitator superfamily MFS_1; hypothetical protein complement(2950915..2952132) Serratia proteamaculans 568 5606228 YP_001478911.1 CDS Spro_2682 NC_009832.1 2952461 2953207 R membrane spanning protein in TonB-ExbB-ExbD complex; transduces proton motive force of the cytoplasmic membrane to outer membrane transporters; involved in the transport of ron-siderophore complexes, vitamin B12 and colicins; transport protein TonB complement(2952461..2953207) Serratia proteamaculans 568 5606229 YP_001478912.1 CDS Spro_2683 NC_009832.1 2953445 2954125 R PFAM: protein of unknown function DUF208; KEGG: sbo:SBO_1709 hypothetical protein; hypothetical protein complement(2953445..2954125) Serratia proteamaculans 568 5606249 YP_001478913.1 CDS Spro_2684 NC_009832.1 2954280 2954576 D PFAM: YCII-related; KEGG: ent:Ent638_2288 YCII-related; YCII-like protein 2954280..2954576 Serratia proteamaculans 568 5606250 YP_001478914.1 CDS Spro_2685 NC_009832.1 2954744 2956633 D hypothetical protein 2954744..2956633 Serratia proteamaculans 568 5606461 YP_001478915.1 CDS Spro_2686 NC_009832.1 2956795 2957340 R PFAM: regulatory protein TetR; KEGG: pau:PA14_47610 putative transcriptional regulator; TetR family transcriptional regulator complement(2956795..2957340) Serratia proteamaculans 568 5606462 YP_001478916.1 CDS Spro_2687 NC_009832.1 2957421 2958935 D PFAM: major facilitator superfamily MFS_1; KEGG: pau:PA14_47640 putative major facilitator superfamily (MFS) transporter; major facilitator transporter 2957421..2958935 Serratia proteamaculans 568 5606463 YP_001478917.1 CDS Spro_2688 NC_009832.1 2959132 2959623 D PFAM: Ferritin Dps family protein; KEGG: vco:VC0395_A2381 DPS family protein; Ferritin Dps family protein 2959132..2959623 Serratia proteamaculans 568 5606470 YP_001478918.1 CDS cls NC_009832.1 2960099 2961559 D catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol); cardiolipin synthetase 2960099..2961559 Serratia proteamaculans 568 5606471 YP_001478919.1 CDS Spro_2690 NC_009832.1 2961815 2962138 D highly acidic protein; the structure of the Haemophilus influenzae protein shows similarity to uracil DNA glycosylase inhibitor (Ugi); binds heat-unstable protein (HU-alpha) which is a histone-like protein; dsDNA-mimic protein 2961815..2962138 Serratia proteamaculans 568 5606472 YP_001478920.1 CDS Spro_2691 NC_009832.1 2962203 2962967 R PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: bbt:BBta_2220 glycerol-3-phosphate regulon repressor, transcriptional regulator protein, DeoR family; DeoR family transcriptional regulator complement(2962203..2962967) Serratia proteamaculans 568 5606487 YP_001478921.1 CDS Spro_2692 NC_009832.1 2963269 2964711 D PFAM: carbohydrate kinase FGGY; KEGG: pae:PA1487 probable carbohydrate kinase; carbohydrate kinase FGGY 2963269..2964711 Serratia proteamaculans 568 5606488 YP_001478922.1 CDS Spro_2693 NC_009832.1 2964736 2965983 D PFAM: Ethanolamine utilisation protein EutH; KEGG: pae:PA1491 probable transporter; ethanolamine utilisation protein EutH 2964736..2965983 Serratia proteamaculans 568 5606489 YP_001478923.1 CDS Spro_2694 NC_009832.1 2966052 2966408 D KEGG: pae:PA1492 hypothetical protein; hypothetical protein 2966052..2966408 Serratia proteamaculans 568 5606496 YP_001478924.1 CDS Spro_2695 NC_009832.1 2966480 2967697 R PFAM: FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: vei:Veis_1679 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(2966480..2967697) Serratia proteamaculans 568 5606497 YP_001478925.1 CDS Spro_2696 NC_009832.1 2967694 2969091 R PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: pfl:PFL_0501 oxidoreductase, FAD-binding; FAD dependent oxidoreductase complement(2967694..2969091) Serratia proteamaculans 568 5606498 YP_001478926.1 CDS Spro_2697 NC_009832.1 2969376 2970377 R KEGG: yen:YE2229 oligopeptide transport ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(2969376..2970377) Serratia proteamaculans 568 5606511 YP_001478927.1 CDS oppD NC_009832.1 2970374 2971390 R KEGG: yen:YE2230 oligopeptide transport ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide transporter ATP-binding protein complement(2970374..2971390) Serratia proteamaculans 568 5606512 YP_001478928.1 CDS Spro_2699 NC_009832.1 2971402 2972310 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sbo:SBO_1822 OppC; binding-protein-dependent transport systems inner membrane component complement(2971402..2972310) Serratia proteamaculans 568 5606513 YP_001478929.1 CDS oppB NC_009832.1 2972325 2973245 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA2323 oligopeptide transport system permease protein; oligopeptide transporter permease complement(2972325..2973245) Serratia proteamaculans 568 5606514 YP_001478930.1 CDS Spro_2701 NC_009832.1 2973329 2974966 R PFAM: extracellular solute-binding protein family 5; KEGG: yen:YE2233 periplasmic oligopeptide-binding protein precursor; extracellular solute-binding protein complement(2973329..2974966) Serratia proteamaculans 568 5606515 YP_001478931.1 CDS Spro_2702 NC_009832.1 2975119 2976756 R PFAM: extracellular solute-binding protein family 5; KEGG: yen:YE2234 periplasmic oligopeptide-binding protein precursor; extracellular solute-binding protein complement(2975119..2976756) Serratia proteamaculans 568 5606516 YP_001478932.1 CDS Spro_2703 NC_009832.1 2977447 2978091 R PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: yen:YE2237 hypothetical protein; hypothetical protein complement(2977447..2978091) Serratia proteamaculans 568 5606560 YP_001478933.1 CDS Spro_2704 NC_009832.1 2978616 2981288 D PFAM: iron-containing alcohol dehydrogenase; aldehyde dehydrogenase; KEGG: yen:YE2238 aldehyde-alcohol dehydrogenase; bifunctional acetaldehyde-CoA/alcohol dehydrogenase 2978616..2981288 Serratia proteamaculans 568 5606561 YP_001478934.1 CDS Spro_2705 NC_009832.1 2981414 2981998 R catalyzes the formation of thymidine 5'-phosphate from thymidine; thymidine kinase complement(2981414..2981998) Serratia proteamaculans 568 5606562 YP_001478935.1 CDS Spro_2706 NC_009832.1 2982697 2983104 D PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: ypi:YpsIP31758_1966 DNA-binding protein H-NS; global DNA-binding transcriptional dual regulator H-NS 2982697..2983104 Serratia proteamaculans 568 5606619 YP_001478936.1 CDS Spro_2707 NC_009832.1 2983321 2984331 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: kpn:KPN_02492 uridine diphosphate galacturonate 4-epimerase; NAD-dependent epimerase/dehydratase complement(2983321..2984331) Serratia proteamaculans 568 5606620 YP_001478937.1 CDS Spro_2708 NC_009832.1 2984341 2985684 R PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: sgl:SG1368 putative UDP-glucose dehydrogenase; UDP-glucose 6-dehydrogenase complement(2984341..2985684) Serratia proteamaculans 568 5606621 YP_001478938.1 CDS Spro_2709 NC_009832.1 2985728 2986645 R together with GalF subunit composes the UTP--glucose-1-phosphate uridylyltransferase, an enzyme that catalyzes the formation of UDP-glucose from UTP and alpha-D-glucose 1-phosphate; regulates cellular levels of UDP-glucose; UTP--glucose-1-phosphate uridylyltransferase subunit GalU complement(2985728..2986645) Serratia proteamaculans 568 5606625 YP_001478939.1 CDS Spro_2710 NC_009832.1 2986845 2987858 R PFAM: response regulator receiver; KEGG: yen:YE2243 probable response regulator; response regulator of RpoS complement(2986845..2987858) Serratia proteamaculans 568 5606626 YP_001478940.1 CDS Spro_2711 NC_009832.1 2987964 2988869 R PFAM: Patatin; KEGG: yen:YE2244 hypothetical protein; hypothetical protein complement(2987964..2988869) Serratia proteamaculans 568 5606627 YP_001478941.1 CDS Spro_2712 NC_009832.1 2989012 2989476 D PFAM: SEC-C motif domain protein; KEGG: yen:YE2246 hypothetical protein; hypothetical protein 2989012..2989476 Serratia proteamaculans 568 5606668 YP_001478942.1 CDS purU NC_009832.1 2989603 2990451 D produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase 2989603..2990451 Serratia proteamaculans 568 5606669 YP_001478943.1 CDS Spro_2714 NC_009832.1 2991210 2991782 D PFAM: conserved hypothetical protein; KEGG: psa:PST_1098 hypothetical protein; hypothetical protein 2991210..2991782 Serratia proteamaculans 568 5604419 YP_001478944.1 CDS Spro_2715 NC_009832.1 2991886 2992692 D removes the damaged DNA at cytosines and guanines by cleaving on the 3' side of the AP site by a beta-elimination reaction; exonuclease III 2991886..2992692 Serratia proteamaculans 568 5606700 YP_001478945.1 CDS Spro_2716 NC_009832.1 2992738 2993139 D PFAM: NUDIX hydrolase; KEGG: yen:YE2255 putative pyrophosphohydrolase; pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase 2992738..2993139 Serratia proteamaculans 568 5606701 YP_001478946.1 CDS Spro_2717 NC_009832.1 2993149 2993442 R PFAM: protein of unknown function DUF1496; KEGG: yen:YE2256 hypothetical protein; hypothetical protein complement(2993149..2993442) Serratia proteamaculans 568 5606702 YP_001478947.1 CDS Spro_2718 NC_009832.1 2993439 2995364 R decatenates replicating daughter chromosomes; DNA topoisomerase III complement(2993439..2995364) Serratia proteamaculans 568 5606740 YP_001478948.1 CDS Spro_2719 NC_009832.1 2995364 2996482 R catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA; tRNA 2-selenouridine synthase complement(2995364..2996482) Serratia proteamaculans 568 5606741 YP_001478949.1 CDS Spro_2720 NC_009832.1 2996482 2997525 R KEGG: yen:YE2258 selenide, water dikinase; TIGRFAM: selenide, water dikinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; selenide, water dikinase complement(2996482..2997525) Serratia proteamaculans 568 5606742 YP_001478950.1 CDS Spro_2721 NC_009832.1 2997683 2998234 R PFAM: nitroreductase; KEGG: ypi:YpsIP31758_1981 nitroreductase family protein; hypothetical protein complement(2997683..2998234) Serratia proteamaculans 568 5606767 YP_001478951.1 CDS Spro_2722 NC_009832.1 2998395 3000251 D SppA; catalyzes the degradation of cleaved signal peptides; essential to maintain secretion of mature proteins across the membrane; protease 4 2998395..3000251 Serratia proteamaculans 568 5606768 YP_001478952.1 CDS ansA NC_009832.1 3000345 3001361 D converts asparagine to aspartate and ammonia; cytoplasmic asparaginase I 3000345..3001361 Serratia proteamaculans 568 5606769 YP_001478953.1 CDS Spro_2724 NC_009832.1 3001383 3002015 D catalyzes the formation of nicotinate from nicotinamide in NAD biosynthesis and the formation of pyrazinoate from pyrazinamide; nicotinamidase/pyrazinamidase 3001383..3002015 Serratia proteamaculans 568 5606792 YP_001478954.1 CDS Spro_2725 NC_009832.1 3002244 3003524 D PFAM: glycoside hydrolase family 18; SMART: chitinase II; KEGG: kpn:KPN_01201 putative chitinase II; glycoside hydrolase family protein 3002244..3003524 Serratia proteamaculans 568 5606793 YP_001478955.1 CDS Spro_2726 NC_009832.1 3003562 3003834 R PFAM: protein of unknown function DUF1315; KEGG: yen:YE2263 hypothetical protein; hypothetical protein complement(3003562..3003834) Serratia proteamaculans 568 5606794 YP_001478956.1 CDS Spro_2727 NC_009832.1 3003899 3004312 R this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; methionine sulfoxide reductase B complement(3003899..3004312) Serratia proteamaculans 568 5606795 YP_001478957.1 CDS Spro_2728 NC_009832.1 3004661 3005656 D KEGG: ypi:YpsIP31758_1987 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase 3004661..3005656 Serratia proteamaculans 568 5606796 YP_001478958.1 CDS Spro_2729 NC_009832.1 3005737 3006612 D PFAM: Aldose 1-epimerase; KEGG: yps:YPTB2082 hypothetical protein; aldose 1-epimerase 3005737..3006612 Serratia proteamaculans 568 5606797 YP_001478959.1 CDS Spro_2730 NC_009832.1 3006717 3007481 R PFAM: MltA-interacting MipA family protein; KEGG: ypi:YpsIP31758_1990 MltA-interacting protein; MltA-interacting MipA family protein complement(3006717..3007481) Serratia proteamaculans 568 5606813 YP_001478960.1 CDS Spro_2731 NC_009832.1 3007911 3009845 D PFAM: PrkA serine kinase; PrkA AAA domain protein; KEGG: yen:YE2272 hypothetical protein; putative serine protein kinase, PrkA 3007911..3009845 Serratia proteamaculans 568 5606814 YP_001478961.1 CDS Spro_2732 NC_009832.1 3009910 3011178 D PFAM: protein of unknown function DUF444; KEGG: yen:YE2273 hypothetical protein; hypothetical protein 3009910..3011178 Serratia proteamaculans 568 5606815 YP_001478962.1 CDS Spro_2733 NC_009832.1 3011988 3012677 R KEGG: bur:Bcep18194_A4761 hypothetical protein; hypothetical protein complement(3011988..3012677) Serratia proteamaculans 568 5606844 YP_001478963.1 CDS Spro_2734 NC_009832.1 3013206 3013364 R PFAM: protein of unknown function UPF0057; KEGG: eca:ECA2844 hypothetical protein; hypothetical protein complement(3013206..3013364) Serratia proteamaculans 568 5606845 YP_001478964.1 CDS Spro_2735 NC_009832.1 3013587 3013763 D KEGG: eca:ECA1771 hypothetical protein; hypothetical protein 3013587..3013763 Serratia proteamaculans 568 5606878 YP_001478965.1 CDS Spro_2736 NC_009832.1 3013816 3015933 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: yen:YE0323 ferrioxamine receptor precursor; TonB-dependent siderophore receptor complement(3013816..3015933) Serratia proteamaculans 568 5606879 YP_001478966.1 CDS Spro_2737 NC_009832.1 3016247 3016540 R hypothetical protein complement(3016247..3016540) Serratia proteamaculans 568 5606880 YP_001478967.1 CDS Spro_2738 NC_009832.1 3016712 3017194 D hypothetical protein 3016712..3017194 Serratia proteamaculans 568 5606943 YP_001478968.1 CDS Spro_2739 NC_009832.1 3017461 3018321 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA1552 ABC transporter ATP-binding protein; ABC transporter-like protein 3017461..3018321 Serratia proteamaculans 568 5606944 YP_001478969.1 CDS Spro_2740 NC_009832.1 3018335 3019117 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA1551 ABC transporter ATP binding protein; ABC transporter-like protein 3018335..3019117 Serratia proteamaculans 568 5606945 YP_001478970.1 CDS Spro_2741 NC_009832.1 3019136 3020644 D PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA1549 putative ABC transporter substrate-binding protein; extracellular solute-binding protein 3019136..3020644 Serratia proteamaculans 568 5607014 YP_001478971.1 CDS Spro_2742 NC_009832.1 3020644 3022362 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA1548 putative transport system membrane protein; binding-protein-dependent transport systems inner membrane component 3020644..3022362 Serratia proteamaculans 568 5607015 YP_001478972.1 CDS Spro_2743 NC_009832.1 3022425 3022985 D KEGG: sec:SC0331 endodeoxyribonuclease; endodeoxyribonuclease 3022425..3022985 Serratia proteamaculans 568 5607016 YP_001478973.1 CDS Spro_2744 NC_009832.1 3023095 3024288 D TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: ypi:YpsIP31758_1996 drug resistance transporter, Bcr/CflA family; Bcr/CflA subfamily drug resistance transporter 3023095..3024288 Serratia proteamaculans 568 5607029 YP_001478974.1 CDS Spro_2745 NC_009832.1 3024292 3025365 R KEGG: ent:Ent638_2362 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein; alanine racemase complement(3024292..3025365) Serratia proteamaculans 568 5607030 YP_001478975.1 CDS Spro_2746 NC_009832.1 3025438 3026742 R catalyzes the oxidative deamination of D-amino acids; D-amino acid dehydrogenase small subunit complement(3025438..3026742) Serratia proteamaculans 568 5607031 YP_001478976.1 CDS Spro_2747 NC_009832.1 3027281 3028816 D PFAM: SpoVR family protein; KEGG: ypi:YpsIP31758_1998 SpoVR family protein; SpoVR family protein 3027281..3028816 Serratia proteamaculans 568 5607056 YP_001478977.1 CDS Spro_2748 NC_009832.1 3028885 3029604 R Multifunctional regulator of fatty acid metabolism; fatty acid metabolism regulator complement(3028885..3029604) Serratia proteamaculans 568 5607057 YP_001478978.1 CDS nhaB NC_009832.1 3029847 3031427 D involved in regulation of intracellular pH under alkaline conditions; sodium/proton antiporter 3029847..3031427 Serratia proteamaculans 568 5607058 YP_001478979.1 CDS Spro_2750 NC_009832.1 3031552 3032082 D disulfide oxidoreductase; integral membrane protein; required for perioplasmic disulfide bond formation; oxidizes DsbA protein; disulfide bond formation protein B 3031552..3032082 Serratia proteamaculans 568 5607108 YP_001478980.1 CDS Spro_2751 NC_009832.1 3032589 3033035 R PFAM: protein of unknown function UPF0153; KEGG: yen:YE2365 hypothetical protein; hypothetical protein complement(3032589..3033035) Serratia proteamaculans 568 5607109 YP_001478981.1 CDS Spro_2752 NC_009832.1 3033444 3033692 D KEGG: ent:Ent638_1759 protein of unknown function DUF883, ElaB; hypothetical protein 3033444..3033692 Serratia proteamaculans 568 5607110 YP_001478982.1 CDS Spro_2753 NC_009832.1 3033768 3034424 R PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: yen:YE2366 putative fumarylacetoacetate hydrolase family protein; hypothetical protein complement(3033768..3034424) Serratia proteamaculans 568 5607147 YP_001478983.1 CDS Spro_2754 NC_009832.1 3034508 3035548 R TIGRFAM: lytic murein transglycosylase; KEGG: yen:YE2367 putative lipoprotein; lytic murein transglycosylase complement(3034508..3035548) Serratia proteamaculans 568 5607148 YP_001478984.1 CDS Spro_2755 NC_009832.1 3035612 3035884 R PFAM: protein of unknown function DUF709; KEGG: ecv:APECO1_292 hypothetical protein; hypothetical protein complement(3035612..3035884) Serratia proteamaculans 568 5607149 YP_001478985.1 CDS minC NC_009832.1 3036021 3036722 D blocks the formation of polar Z-ring septums; septum formation inhibitor 3036021..3036722 Serratia proteamaculans 568 5607198 YP_001478986.1 CDS Spro_2757 NC_009832.1 3036748 3037560 D ATPase; with MinC inhibits cell division by blocking formation of the polar Z ring septums; cell division inhibitor MinD 3036748..3037560 Serratia proteamaculans 568 5607199 YP_001478987.1 CDS minE NC_009832.1 3037564 3037833 D works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; cell division topological specificity factor MinE 3037564..3037833 Serratia proteamaculans 568 5607200 YP_001478988.1 CDS Spro_2759 NC_009832.1 3038070 3039242 R TIGRFAM: ribonuclease D; PFAM: HRDC domain protein; 3'-5' exonuclease; KEGG: ypp:YPDSF_1046 ribonuclease D; ribonuclease D complement(3038070..3039242) Serratia proteamaculans 568 5607225 YP_001478989.1 CDS Spro_2760 NC_009832.1 3039281 3041002 R Activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase complement(3039281..3041002) Serratia proteamaculans 568 5607226 YP_001478990.1 CDS Spro_2761 NC_009832.1 3041177 3041767 R TIGRFAM: outer membrane lipoprotein, Slp family; PFAM: outer membrane lipoprotein Slp; KEGG: yen:YE2376 putative lipoprotein; Slp family outer membrane lipoprotein complement(3041177..3041767) Serratia proteamaculans 568 5607227 YP_001478991.1 CDS Spro_2762 NC_009832.1 3041869 3042570 R PFAM: peptidase M22 glycoprotease; KEGG: ypi:YpsIP31758_2016 peptidase family M22, nonpeptidase-like protein; peptidase M22 glycoprotease complement(3041869..3042570) Serratia proteamaculans 568 5607348 YP_001478992.1 CDS Spro_2763 NC_009832.1 3042651 3044555 R SMART: helicase c2; DEAD-like helicases; KEGG: ypi:YpsIP31758_2017 hypothetical protein; helicase c2 complement(3042651..3044555) Serratia proteamaculans 568 5607349 YP_001478993.1 CDS Spro_2764 NC_009832.1 3044689 3045033 D PFAM: Endoribonuclease L-PSP; KEGG: plu:plu2128 hypothetical protein; endoribonuclease L-PSP 3044689..3045033 Serratia proteamaculans 568 5607350 YP_001478994.1 CDS Spro_2765 NC_009832.1 3045091 3045420 R with MdtJ is involved in resistance to deoxycholate, nalidixic acid, fosfomycin, and SDS; multidrug efflux system protein MdtI complement(3045091..3045420) Serratia proteamaculans 568 5607363 YP_001478995.1 CDS Spro_2766 NC_009832.1 3045407 3045775 R PFAM: small multidrug resistance protein; KEGG: yen:YE2381 putative inner membrane protein; small multidrug resistance protein complement(3045407..3045775) Serratia proteamaculans 568 5607364 YP_001478996.1 CDS Spro_2767 NC_009832.1 3046341 3046982 R catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate; keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase complement(3046341..3046982) Serratia proteamaculans 568 5607365 YP_001478997.1 CDS Spro_2768 NC_009832.1 3047135 3048610 R catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase complement(3047135..3048610) Serratia proteamaculans 568 5607410 YP_001478998.1 CDS Spro_2769 NC_009832.1 3048963 3049835 D Represses the expression of the zwf, eda, glp and gap; DNA-binding transcriptional regulator HexR 3048963..3049835 Serratia proteamaculans 568 5607411 YP_001478999.1 CDS Spro_2770 NC_009832.1 3050023 3051465 D catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 3050023..3051465 Serratia proteamaculans 568 5607412 YP_001479000.1 CDS Spro_2771 NC_009832.1 3051648 3052616 R Transfers myristate or laurate, activated on ACP, to the lipid IVA moiety of (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase complement(3051648..3052616) Serratia proteamaculans 568 5606689 YP_001479001.1 CDS Spro_2772 NC_009832.1 3052762 3054084 R PFAM: Peptidoglycan-binding LysM; peptidase M23B; Opacity-associated protein A domain protein; KEGG: ypi:YpsIP31758_2026 peptidase, M23 family; hypothetical protein complement(3052762..3054084) Serratia proteamaculans 568 5606690 YP_001479002.1 CDS znuA NC_009832.1 3054106 3055071 R involved in transport of zinc(II) with ZnuA and C; high-affinity zinc transporter periplasmic component complement(3054106..3055071) Serratia proteamaculans 568 5606691 YP_001479003.1 CDS znuC NC_009832.1 3055150 3055908 D involved in transport of zinc(II) with ZnuA and C; high-affinity zinc transporter ATPase 3055150..3055908 Serratia proteamaculans 568 5605546 YP_001479004.1 CDS znuB NC_009832.1 3055905 3056690 D involved in transport of zinc(II) with ZnuA and C; high-affinity zinc transporter membrane protein 3055905..3056690 Serratia proteamaculans 568 5605547 YP_001479005.1 CDS ruvB NC_009832.1 3056765 3057769 R promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB complement(3056765..3057769) Serratia proteamaculans 568 5605548 YP_001479006.1 CDS ruvA NC_009832.1 3057790 3058401 R plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA complement(3057790..3058401) Serratia proteamaculans 568 5603992 YP_001479007.1 CDS ruvC NC_009832.1 3058643 3059164 R endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase complement(3058643..3059164) Serratia proteamaculans 568 5603993 YP_001479008.1 CDS Spro_2779 NC_009832.1 3059238 3059981 R PFAM: protein of unknown function DUF28; KEGG: eca:ECA2494 hypothetical protein; hypothetical protein complement(3059238..3059981) Serratia proteamaculans 568 5603994 YP_001479009.1 CDS Spro_2780 NC_009832.1 3060001 3060447 R PFAM: NUDIX hydrolase; KEGG: ypi:YpsIP31758_2034 putative dATP pyrophosphohydrolase; NUDIX hydrolase complement(3060001..3060447) Serratia proteamaculans 568 5603847 YP_001479010.1 CDS aspS NC_009832.1 3060447 3062228 R catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase complement(3060447..3062228) Serratia proteamaculans 568 5603848 YP_001479011.1 CDS Spro_2782 NC_009832.1 3062312 3062503 R TIGRFAM: putative regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: aeh:Mlg_0229 putative regulatory protein, FmdB family; FmdB family regulatory protein complement(3062312..3062503) Serratia proteamaculans 568 5603849 YP_001479012.1 CDS Spro_2783 NC_009832.1 3062745 3063323 D PFAM: isochorismatase hydrolase; KEGG: yen:YE2398 putative isochorismatase; hypothetical protein 3062745..3063323 Serratia proteamaculans 568 5603822 YP_001479013.1 CDS Spro_2784 NC_009832.1 3063398 3064213 D PFAM: protein of unknown function DUF72; KEGG: yen:YE2399 hypothetical protein; hypothetical protein 3063398..3064213 Serratia proteamaculans 568 5603823 YP_001479014.1 CDS Spro_2785 NC_009832.1 3064316 3064711 D KEGG: yen:YE2400 hypothetical protein; hypothetical protein 3064316..3064711 Serratia proteamaculans 568 5603947 YP_001479015.1 CDS Spro_2786 NC_009832.1 3064814 3065557 D TIGRFAM: putative methyltransferase; PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: ypi:YpsIP31758_2038 putative methyltransferase; putative methyltransferase 3064814..3065557 Serratia proteamaculans 568 5603948 YP_001479016.1 CDS Spro_2787 NC_009832.1 3065554 3066525 D TIGRFAM: putative methyltransferase; PFAM: methyltransferase putative; Methyltransferase type 11; KEGG: yen:YE2402 hypothetical protein; putative methyltransferase 3065554..3066525 Serratia proteamaculans 568 5603949 YP_001479017.1 CDS Spro_2788 NC_009832.1 3066605 3067363 R PFAM: CutC family protein; KEGG: yen:YE2403 putative copper homeostasis protein; copper homeostasis protein CutC complement(3066605..3067363) Serratia proteamaculans 568 5603189 YP_001479018.1 CDS Spro_2789 NC_009832.1 3067465 3068616 D PFAM: aminotransferase class I and II; KEGG: aha:AHA_3110 putative aminotransferase B; class I and II aminotransferase 3067465..3068616 Serratia proteamaculans 568 5603190 YP_001479019.1 CDS Spro_2790 NC_009832.1 3068613 3069176 R PFAM: protein of unknown function DUF991; KEGG: ecv:APECO1_925 hypothetical protein; hypothetical protein complement(3068613..3069176) Serratia proteamaculans 568 5603191 YP_001479020.1 CDS argS NC_009832.1 3070077 3071807 D catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 3070077..3071807 Serratia proteamaculans 568 5607383 YP_001479021.1 CDS Spro_2792 NC_009832.1 3071881 3073416 R TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; KEGG: yen:YE2409 hypothetical protein; integral membrane protein MviN complement(3071881..3073416) Serratia proteamaculans 568 5607384 YP_001479022.1 CDS Spro_2793 NC_009832.1 3073539 3074459 R PFAM: oxidoreductase domain protein; KEGG: yps:YPTB2025 putative oxidoreductase; oxidoreductase domain-containing protein complement(3073539..3074459) Serratia proteamaculans 568 5607385 YP_001479023.1 CDS Spro_2794 NC_009832.1 3074452 3075096 R PFAM: protein of unknown function DUF480; KEGG: stm:STM1168 putative cytoplasmic protein; hypothetical protein complement(3074452..3075096) Serratia proteamaculans 568 5602461 YP_001479024.1 CDS Spro_2795 NC_009832.1 3075106 3075690 R PFAM: GCN5-related N-acetyltransferase; KEGG: yen:YE2412 ribosomal-protein-alanine acetyltransferase; ribosomal-protein-S5-alanine N-acetyltransferase complement(3075106..3075690) Serratia proteamaculans 568 5602462 YP_001479025.1 CDS Spro_2796 NC_009832.1 3076036 3077241 D Confers resistance to norfloxacin and enoxacin; multidrug resistance protein MdtH 3076036..3077241 Serratia proteamaculans 568 5602463 YP_001479026.1 CDS Spro_2797 NC_009832.1 3077327 3077575 D hypothetical protein 3077327..3077575 Serratia proteamaculans 568 5602488 YP_001479027.1 CDS Spro_2798 NC_009832.1 3077705 3078352 D cofactor involved in the reduction of disulfides; glutaredoxin 2 3077705..3078352 Serratia proteamaculans 568 5602489 YP_001479028.1 CDS Spro_2799 NC_009832.1 3078381 3080021 D PFAM: ABC-1 domain protein; KEGG: sfr:Sfri_1807 ABC-1 domain protein; hypothetical protein 3078381..3080021 Serratia proteamaculans 568 5602490 YP_001479029.1 CDS Spro_2800 NC_009832.1 3080160 3080723 D PFAM: protein of unknown function DUF1439; KEGG: yen:YE2419 putative lipoprotein; hypothetical protein 3080160..3080723 Serratia proteamaculans 568 5602497 YP_001479030.1 CDS Spro_2801 NC_009832.1 3080818 3081177 R secreted protein; unknown function; hypothetical protein complement(3080818..3081177) Serratia proteamaculans 568 5602498 YP_001479031.1 CDS Spro_2802 NC_009832.1 3081248 3081556 R PFAM: protein of unknown function DUF437; KEGG: yen:YE1787 hypothetical protein; hypothetical protein complement(3081248..3081556) Serratia proteamaculans 568 5602499 YP_001479032.1 CDS Spro_2803 NC_009832.1 3081596 3081919 R PFAM: YebG family protein; KEGG: yen:YE1786 hypothetical protein; YebG family protein complement(3081596..3081919) Serratia proteamaculans 568 5602503 YP_001479033.1 CDS Spro_2804 NC_009832.1 3082008 3083390 R exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA; ATP-dependent RNA helicase DbpA complement(3082008..3083390) Serratia proteamaculans 568 5602504 YP_001479034.1 CDS purT NC_009832.1 3083632 3084810 D non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis; phosphoribosylglycinamide formyltransferase 2 3083632..3084810 Serratia proteamaculans 568 5602505 YP_001479035.1 CDS Spro_2806 NC_009832.1 3084844 3085089 R PFAM: protein of unknown function UPF0181; KEGG: ypi:YpsIP31758_2352 hypothetical protein; hypothetical protein complement(3084844..3085089) Serratia proteamaculans 568 5602522 YP_001479036.1 CDS Spro_2807 NC_009832.1 3085153 3086151 R PFAM: glycosyl transferase family 2; KEGG: ecp:ECP_3716 putative glycosyl transferase YibD; putative glycosyl transferase complement(3085153..3086151) Serratia proteamaculans 568 5602523 YP_001479037.1 CDS Spro_2808 NC_009832.1 3086593 3087966 D TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Anthranilate synthase component I domain protein; Chorismate binding-like; KEGG: yps:YPTB1649 para-aminobenzoate synthase component I; para-aminobenzoate synthase subunit I 3086593..3087966 Serratia proteamaculans 568 5602524 YP_001479038.1 CDS Spro_2809 NC_009832.1 3087963 3088541 D PFAM: NUDIX hydrolase; KEGG: yen:YE1780 MutT-family protein; hypothetical protein 3087963..3088541 Serratia proteamaculans 568 5602534 YP_001479039.1 CDS Spro_2810 NC_009832.1 3088965 3090350 D KEGG: ypi:YpsIP31758_2355 L-serine ammonia-lyase; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; L-serine dehydratase 1 3088965..3090350 Serratia proteamaculans 568 5602535 YP_001479040.1 CDS Spro_2811 NC_009832.1 3090810 3092426 D PFAM: EAL domain protein; KEGG: ent:Ent638_2384 diguanylate phosphodiesterase; EAL domain-containing protein 3090810..3092426 Serratia proteamaculans 568 5602536 YP_001479041.1 CDS Spro_2812 NC_009832.1 3092444 3093988 R PFAM: CBS domain containing protein; transporter-associated region; Integral membrane protein TerC; KEGG: ypi:YpsIP31758_2367 membrane protein TerC family/CBS domain protein; integral membrane protein TerC complement(3092444..3093988) Serratia proteamaculans 568 5602576 YP_001479042.1 CDS Spro_2813 NC_009832.1 3094564 3095535 D KEGG: yps:YPTB1634 PTS system, mannose-specific IIAB component; TIGRFAM: PTS system, mannose/fructose/sorbose family, IIB subunit; PTS system, mannose/fructose/sorbose family, IIA subunit; PFAM: PTS system fructose subfamily IIA component; PTS system sorbose subfamily IIB component; PTS system mannose/fructose/sorbose family transporter subunit IIB 3094564..3095535 Serratia proteamaculans 568 5602577 YP_001479043.1 CDS Spro_2814 NC_009832.1 3095591 3096391 D TIGRFAM: PTS system, mannose/fructose/sorbose family, IIC subunit; PFAM: phosphotransferase system PTS sorbose-specific IIC subunit; KEGG: ypi:YpsIP31758_2369 PTS system, mannose/fructose/sorbose family, IIC component; PTS system mannose/fructose/sorbose family transporter subunit IIC 3095591..3096391 Serratia proteamaculans 568 5602578 YP_001479044.1 CDS Spro_2815 NC_009832.1 3096407 3097249 D hosphoenolpyruvate-dependent sugar phosphotransferase system catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IID with IIC forms the translocation channel; PTS system mannose-specific transporter subunit IID 3096407..3097249 Serratia proteamaculans 568 5602620 YP_001479045.1 CDS Spro_2816 NC_009832.1 3097443 3097901 D PFAM: protein of unknown function DUF986; KEGG: ypi:YpsIP31758_2371 hypothetical protein; hypothetical protein 3097443..3097901 Serratia proteamaculans 568 5602621 YP_001479046.1 CDS Spro_2817 NC_009832.1 3098318 3098887 D PFAM: protein of unknown function DUF204; KEGG: yen:YE1772 hypothetical protein; hypothetical protein 3098318..3098887 Serratia proteamaculans 568 5602622 YP_001479047.1 CDS Spro_2818 NC_009832.1 3098944 3100335 R PFAM: major facilitator superfamily MFS_1; KEGG: vei:Veis_4582 drug resistance transporter, EmrB/QacA subfamily; major facilitator transporter complement(3098944..3100335) Serratia proteamaculans 568 5602652 YP_001479048.1 CDS Spro_2819 NC_009832.1 3100465 3101202 D SMART: regulatory protein ArsR; KEGG: ccr:CC_3070 transcriptional regulator, ArsR family; ArsR family transcriptional regulator 3100465..3101202 Serratia proteamaculans 568 5602653 YP_001479049.1 CDS rrmA NC_009832.1 3101199 3102020 R methylates the guanosine in position 745 of 23S rRNA; required for translation and cell growth; 23S rRNA methyltransferase A complement(3101199..3102020) Serratia proteamaculans 568 5602654 YP_001479050.1 CDS Spro_2821 NC_009832.1 3102165 3102881 D PFAM: protein of unknown function DUF152; KEGG: ypk:y2562 hypothetical protein; hypothetical protein 3102165..3102881 Serratia proteamaculans 568 5602776 YP_001479051.1 CDS Spro_2822 NC_009832.1 3102934 3103143 R PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: yps:YPTB1624 cold shock protein; cold shock-like protein CspC complement(3102934..3103143) Serratia proteamaculans 568 5602777 YP_001479052.1 CDS Spro_2823 NC_009832.1 3104179 3105177 R PFAM: beta-lactamase domain protein; KEGG: ypi:YpsIP31758_2754 metallo-beta-lactamase family protein; beta-lactamase domain-containing protein complement(3104179..3105177) Serratia proteamaculans 568 5602778 YP_001479053.1 CDS Spro_2824 NC_009832.1 3105397 3105687 D hypothetical protein 3105397..3105687 Serratia proteamaculans 568 5602791 YP_001479054.1 CDS Spro_2825 NC_009832.1 3105727 3107094 R PFAM: amino acid permease-associated region; KEGG: yen:YE1761 aromatic amino acid transport protein; amino acid permease-associated protein complement(3105727..3107094) Serratia proteamaculans 568 5602792 YP_001479055.1 CDS Spro_2826 NC_009832.1 3107271 3107507 R KEGG: ypi:YpsIP31758_2382 hypothetical protein; hypothetical protein complement(3107271..3107507) Serratia proteamaculans 568 5602793 YP_001479056.1 CDS Spro_2827 NC_009832.1 3107575 3107889 R KEGG: ypi:YpsIP31758_2383 hypothetical protein; hypothetical protein complement(3107575..3107889) Serratia proteamaculans 568 5602824 YP_001479057.1 CDS Spro_2828 NC_009832.1 3108035 3108307 R KEGG: yps:YPTB1618 hypothetical protein; hypothetical protein complement(3108035..3108307) Serratia proteamaculans 568 5602825 YP_001479058.1 CDS Spro_2829 NC_009832.1 3108407 3108529 R KEGG: plu:plu2786 hypothetical protein; hypothetical protein complement(3108407..3108529) Serratia proteamaculans 568 5602826 YP_001479059.1 CDS Spro_2830 NC_009832.1 3108728 3108961 D KEGG: ypi:YpsIP31758_2385 hypothetical protein; hypothetical protein 3108728..3108961 Serratia proteamaculans 568 5603026 YP_001479060.1 CDS Spro_2831 NC_009832.1 3109001 3109240 R KEGG: ypi:YpsIP31758_2386 hypothetical protein; hypothetical protein complement(3109001..3109240) Serratia proteamaculans 568 5603027 YP_001479061.1 CDS Spro_2832 NC_009832.1 3109442 3109654 D KEGG: kpn:KPN_01028 hypothetical protein; hypothetical protein 3109442..3109654 Serratia proteamaculans 568 5603028 YP_001479062.1 CDS Spro_2833 NC_009832.1 3110111 3110497 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: yen:YE1753 AraC-family transcriptional regulatory protein; AraC family transcriptional regulator 3110111..3110497 Serratia proteamaculans 568 5603051 YP_001479063.1 CDS Spro_2834 NC_009832.1 3110527 3110880 R PFAM: protein of unknown function DUF1304; KEGG: kpn:KPN_01507 hypothetical protein; hypothetical protein complement(3110527..3110880) Serratia proteamaculans 568 5603052 YP_001479064.1 CDS Spro_2835 NC_009832.1 3111308 3112249 R PFAM: Pirin domain protein; KEGG: csa:Csal_1778 pirin-like protein; pirin domain-containing protein complement(3111308..3112249) Serratia proteamaculans 568 5603053 YP_001479065.1 CDS Spro_2836 NC_009832.1 3112961 3113407 R PFAM: Peptidoglycan-binding LysM; transport-associated; SMART: Transport-associated and nodulation region; KEGG: stm:STM2795 hypothetical protein; LysM domain/BON superfamily protein complement(3112961..3113407) Serratia proteamaculans 568 5603094 YP_001479066.1 CDS Spro_2837 NC_009832.1 3113634 3113825 D PFAM: protein of unknown function DUF1482; KEGG: kpn:KPN_02353 hypothetical protein; hypothetical protein 3113634..3113825 Serratia proteamaculans 568 5603095 YP_001479067.1 CDS Spro_2838 NC_009832.1 3113956 3114180 D hypothetical protein 3113956..3114180 Serratia proteamaculans 568 5603096 YP_001479068.1 CDS Spro_2839 NC_009832.1 3114267 3115349 R PFAM: porin Gram-negative type; KEGG: yen:YE2463 outer membrane porin protein; porin complement(3114267..3115349) Serratia proteamaculans 568 5603097 YP_001479069.1 CDS Spro_2840 NC_009832.1 3116001 3116984 R catalyzes the formation of succinate and glutamate from N(2)-succinylglutamate in arginine catabolism; succinylglutamate desuccinylase complement(3116001..3116984) Serratia proteamaculans 568 5603098 YP_001479070.1 CDS Spro_2841 NC_009832.1 3116996 3118336 R catalyzes the hydrolysis of 2-N-succinylarginine into 2-N-succinylornithine, ammonia and carbon dioxide in arginine degradation; succinylarginine dihydrolase complement(3116996..3118336) Serratia proteamaculans 568 5603099 YP_001479071.1 CDS astD NC_009832.1 3118420 3119892 R a high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity; converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH; succinylglutamic semialdehyde dehydrogenase complement(3118420..3119892) Serratia proteamaculans 568 5603120 YP_001479072.1 CDS Spro_2843 NC_009832.1 3119892 3120926 R PFAM: arginine N-succinyltransferase beta subunit; KEGG: yen:YE2468 arginine N-succinyltransferase; arginine succinyltransferase complement(3119892..3120926) Serratia proteamaculans 568 5603121 YP_001479073.1 CDS Spro_2844 NC_009832.1 3120979 3122193 R catalyzes the transamination of 2-N-succinylornithine and alpha-ketoglutarate into 2-N-succinylglutamate semialdehyde and glutamate; also functions as the catabolic acetylornithine aminotransferase catalyzing the formation of 2-N-acetylglutamate semialdehyde and glutamate from 2-N-acetylornithine and alpha-ketoglutarate; bifunctional succinylornithine transaminase/acetylornithine transaminase complement(3120979..3122193) Serratia proteamaculans 568 5603122 YP_001479074.1 CDS Spro_2845 NC_009832.1 3122934 3124208 D PFAM: extracellular solute-binding protein family 1; KEGG: vvy:VVA0125 ABC-type sugar transport system, periplasmic component; extracellular solute-binding protein 3122934..3124208 Serratia proteamaculans 568 5603133 YP_001479075.1 CDS Spro_2846 NC_009832.1 3124343 3125284 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vvy:VVA0126 ABC-type sugar transport system, permease component; binding-protein-dependent transport systems inner membrane component 3124343..3125284 Serratia proteamaculans 568 5603134 YP_001479076.1 CDS Spro_2847 NC_009832.1 3125274 3126107 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vvy:VVA0127 ABC-type sugar transport system, permease component; binding-protein-dependent transport systems inner membrane component 3125274..3126107 Serratia proteamaculans 568 5603135 YP_001479077.1 CDS Spro_2848 NC_009832.1 3126111 3127520 D PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: gbe:GbCGDNIH1_2202 cytosol aminopeptidase; leucyl aminopeptidase 3126111..3127520 Serratia proteamaculans 568 5603172 YP_001479078.1 CDS Spro_2849 NC_009832.1 3127520 3128653 D PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: mmw:Mmwyl1_0607 ABC transporter related; ABC transporter-like protein 3127520..3128653 Serratia proteamaculans 568 5603173 YP_001479079.1 CDS Spro_2850 NC_009832.1 3128706 3129707 D PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: smd:Smed_4293 periplasmic binding protein/LacI transcriptional regulator; LacI family transcription regulator 3128706..3129707 Serratia proteamaculans 568 5603174 YP_001479080.1 CDS Spro_2851 NC_009832.1 3129717 3130643 R PFAM: peptidase T2 asparaginase 2; KEGG: ftn:FTN_0588 asparaginase; asparaginase complement(3129717..3130643) Serratia proteamaculans 568 5603200 YP_001479081.1 CDS Spro_2852 NC_009832.1 3130886 3131860 D PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: psp:PSPPH_3647 lipase; alpha/beta hydrolase domain-containing protein 3130886..3131860 Serratia proteamaculans 568 5603201 YP_001479082.1 CDS Spro_2853 NC_009832.1 3131862 3132830 R KEGG: kpn:KPN_02023 ATP-binding protein of oligopeptide ABC transport system; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(3131862..3132830) Serratia proteamaculans 568 5603202 YP_001479083.1 CDS Spro_2854 NC_009832.1 3132820 3133806 R KEGG: kpn:KPN_02022 putative ABC transport system ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(3132820..3133806) Serratia proteamaculans 568 5603217 YP_001479084.1 CDS Spro_2855 NC_009832.1 3133803 3134753 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kpn:KPN_02021 oligopeptide ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component complement(3133803..3134753) Serratia proteamaculans 568 5603218 YP_001479085.1 CDS Spro_2856 NC_009832.1 3134756 3135724 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kpn:KPN_02020 oligopeptide ABC transporter, permease; binding-protein-dependent transport systems inner membrane component complement(3134756..3135724) Serratia proteamaculans 568 5603219 YP_001479086.1 CDS Spro_2857 NC_009832.1 3135761 3137542 R PFAM: extracellular solute-binding protein family 5; KEGG: kpn:KPN_02019 putative oligopeptide ABC transporter, oligopeptide-binding protein; extracellular solute-binding protein complement(3135761..3137542) Serratia proteamaculans 568 5603226 YP_001479087.1 CDS Spro_2858 NC_009832.1 3137603 3139021 R PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: yen:YE2470 putative GntR-family regulatory protein; transcriptional regulator complement(3137603..3139021) Serratia proteamaculans 568 5603227 YP_001479088.1 CDS Spro_2859 NC_009832.1 3139166 3140566 D PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: yen:YE2471 putative cytochrome oxidase subunit; cytochrome bd ubiquinol oxidase subunit I 3139166..3140566 Serratia proteamaculans 568 5603228 YP_001479089.1 CDS Spro_2860 NC_009832.1 3140569 3141576 D TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: yen:YE2472 putative cytochrome oxidase subunit; cytochrome d ubiquinol oxidase subunit II 3140569..3141576 Serratia proteamaculans 568 5603235 YP_001479090.1 CDS Spro_2861 NC_009832.1 3141576 3141740 D KEGG: pfl:PFL_5362 hypothetical protein; hypothetical protein 3141576..3141740 Serratia proteamaculans 568 5603236 YP_001479091.1 CDS Spro_2862 NC_009832.1 3141790 3142875 R PFAM: fatty acid desaturase; KEGG: eca:ECA0116 putative fatty acid desaturase; fatty acid desaturase complement(3141790..3142875) Serratia proteamaculans 568 5603252 YP_001479092.1 CDS Spro_2863 NC_009832.1 3142872 3143954 R PFAM: fatty acid desaturase; KEGG: eca:ECA0115 putative fatty acid desaturase; fatty acid desaturase complement(3142872..3143954) Serratia proteamaculans 568 5603253 YP_001479093.1 CDS Spro_2864 NC_009832.1 3143947 3145080 R PFAM: fatty acid hydroxylase; KEGG: eca:ECA0114 hypothetical protein; fatty acid hydroxylase complement(3143947..3145080) Serratia proteamaculans 568 5603254 YP_001479094.1 CDS Spro_2865 NC_009832.1 3145077 3145697 R KEGG: eca:ECA0113 hypothetical protein; hypothetical protein complement(3145077..3145697) Serratia proteamaculans 568 5603258 YP_001479095.1 CDS Spro_2866 NC_009832.1 3145694 3146977 R TIGRFAM: putative adenylate-forming enzyme; KEGG: ypi:YpsIP31758_2104 hypothetical protein; putative adenylate-forming protein complement(3145694..3146977) Serratia proteamaculans 568 5603259 YP_001479096.1 CDS Spro_2867 NC_009832.1 3146974 3147780 R PFAM: beta-lactamase domain protein; KEGG: ypi:YpsIP31758_2106 metallo-beta-lactamase family protein; beta-lactamase domain-containing protein complement(3146974..3147780) Serratia proteamaculans 568 5603260 YP_001479097.1 CDS Spro_2868 NC_009832.1 3147773 3148789 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: ypi:YpsIP31758_2107 NAD-dependent epimerase/dehydratase family protein; NAD-dependent epimerase/dehydratase complement(3147773..3148789) Serratia proteamaculans 568 5603261 YP_001479098.1 CDS Spro_2869 NC_009832.1 3148786 3149793 R PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: yps:YPTB1971 putative 3-oxoacyl-(acyl-carrier-protein) synthase III; beta-ketoacyl-acyl-carrier-protein synthase I complement(3148786..3149793) Serratia proteamaculans 568 5603262 YP_001479099.1 CDS Spro_2870 NC_009832.1 3150016 3150282 R hypothetical protein complement(3150016..3150282) Serratia proteamaculans 568 5603263 YP_001479100.1 CDS Spro_2871 NC_009832.1 3150813 3151409 D PFAM: integrase family protein; KEGG: plu:plu0419 recombinase, type 1 fimbriae regulatory protein; integrase family protein 3150813..3151409 Serratia proteamaculans 568 5603264 YP_001479101.1 CDS Spro_2872 NC_009832.1 3151840 3152385 D PFAM: Fimbrial protein; KEGG: shm:Shewmr7_3393 fimbrial protein; fimbrial protein 3151840..3152385 Serratia proteamaculans 568 5603265 YP_001479102.1 CDS Spro_2873 NC_009832.1 3152467 3153147 D PFAM: pili assembly chaperone; KEGG: sec:SC0176 putative fimbrial chaparone; pili assembly chaperone 3152467..3153147 Serratia proteamaculans 568 5603266 YP_001479103.1 CDS Spro_2874 NC_009832.1 3153196 3155718 D PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: kpn:KPN_00277 putative fimbrial usher; fimbrial biogenesis outer membrane usher protein 3153196..3155718 Serratia proteamaculans 568 5603272 YP_001479104.1 CDS Spro_2875 NC_009832.1 3155715 3156782 D PFAM: Fimbrial protein; KEGG: ent:Ent638_1072 fimbrial protein; fimbrial protein 3155715..3156782 Serratia proteamaculans 568 5603273 YP_001479105.1 CDS Spro_2876 NC_009832.1 3156824 3157339 D PFAM: Fimbrial protein; KEGG: ent:Ent638_1068 fimbrial protein; fimbrial protein 3156824..3157339 Serratia proteamaculans 568 5603274 YP_001479106.1 CDS Spro_2877 NC_009832.1 3157432 3157947 D PFAM: Fimbrial protein; KEGG: kpn:KPN_03292 fimbrial morphology; fimbrial protein 3157432..3157947 Serratia proteamaculans 568 5603278 YP_001479107.1 CDS Spro_2878 NC_009832.1 3157974 3158501 D PFAM: Fimbrial protein; KEGG: shm:Shewmr7_3393 fimbrial protein; fimbrial protein 3157974..3158501 Serratia proteamaculans 568 5603279 YP_001479108.1 CDS Spro_2879 NC_009832.1 3158498 3159097 D PFAM: regulatory protein LuxR; KEGG: aha:AHA_1023 DNA-binding response regulator, LuxR family; LuxR family transcriptional regulator 3158498..3159097 Serratia proteamaculans 568 5603280 YP_001479109.1 CDS Spro_2880 NC_009832.1 3159145 3159822 R KEGG: kpn:KPN_02211 nitrate reductase 1, cytochrome b(NR), gamma subunit; TIGRFAM: respiratory nitrate reductase, gamma subunit; PFAM: Nitrate reductase gamma subunit; respiratory nitrate reductase subunit gamma complement(3159145..3159822) Serratia proteamaculans 568 5603281 YP_001479110.1 CDS Spro_2881 NC_009832.1 3159825 3160547 R TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; PFAM: Nitrate reductase delta subunit; KEGG: eca:ECA2033 respiratory nitrate reductase 1 delta chain; nitrate reductase molybdenum cofactor assembly chaperone complement(3159825..3160547) Serratia proteamaculans 568 5603282 YP_001479111.1 CDS Spro_2882 NC_009832.1 3160544 3162088 R TIGRFAM: nitrate reductase, beta subunit; KEGG: eca:ECA2032 respiratory nitrate reductase 1 beta chain; nitrate reductase subunit beta complement(3160544..3162088) Serratia proteamaculans 568 5603283 YP_001479112.1 CDS Spro_2883 NC_009832.1 3162085 3165807 R TIGRFAM: nitrate reductase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: eca:ECA2031 respiratory nitrate reductase 1 alpha chain; nitrate reductase subunit alpha complement(3162085..3165807) Serratia proteamaculans 568 5603284 YP_001479113.1 CDS Spro_2884 NC_009832.1 3166295 3167548 R hypothetical protein complement(3166295..3167548) Serratia proteamaculans 568 5603285 YP_001479114.1 CDS Spro_2885 NC_009832.1 3167734 3168636 R PFAM: glycosyl transferase family 2; KEGG: pha:PSHAa1789 glycosyl transferase, 2; glycosyl transferase family protein complement(3167734..3168636) Serratia proteamaculans 568 5603286 YP_001479115.1 CDS Spro_2886 NC_009832.1 3168641 3169630 R PFAM: glycosyl transferase family 2; KEGG: bsu:BG11868 similar to capsular polysaccharide biosynthesis; glycosyl transferase family protein complement(3168641..3169630) Serratia proteamaculans 568 5603287 YP_001479116.1 CDS Spro_2887 NC_009832.1 3169637 3171514 R PFAM: Carbohydrate-binding CenC domain protein; KEGG: ehi:10.t00010 hypothetical protein Pfam: CBM_4_9; carbohydrate-binding CenC domain-containing protein complement(3169637..3171514) Serratia proteamaculans 568 5603288 YP_001479117.1 CDS Spro_2888 NC_009832.1 3171511 3172254 R PFAM: glycosyl transferase family 2; KEGG: ecs:ECs2845 putative glycosyl transferase; glycosyl transferase family protein complement(3171511..3172254) Serratia proteamaculans 568 5603289 YP_001479118.1 CDS Spro_2889 NC_009832.1 3172256 3173317 R PFAM: glycosyl transferase group 1; KEGG: gox:GOX0630 lipopolysaccharide core biosynthesis protein WbcM; group 1 glycosyl transferase complement(3172256..3173317) Serratia proteamaculans 568 5603290 YP_001479119.1 CDS Spro_2890 NC_009832.1 3173319 3174224 R PFAM: glycosyl transferase family 2; KEGG: sgl:SG0982 hypothetical protein; glycosyl transferase family protein complement(3173319..3174224) Serratia proteamaculans 568 5603291 YP_001479120.1 CDS Spro_2891 NC_009832.1 3174366 3175214 R KEGG: sgl:SG1244 hypothetical protein; hypothetical protein complement(3174366..3175214) Serratia proteamaculans 568 5603292 YP_001479121.1 CDS Spro_2892 NC_009832.1 3175204 3176493 R PFAM: polysaccharide biosynthesis protein; KEGG: ana:all4430 probable polysaccharide biosynthesis protein; polysaccharide biosynthesis protein complement(3175204..3176493) Serratia proteamaculans 568 5603296 YP_001479122.1 CDS Spro_2893 NC_009832.1 3176498 3178681 R PFAM: lipopolysaccharide biosynthesis protein; KEGG: eca:ECA1419 tyrosine-protein kinase; non-specific protein-tyrosine kinase complement(3176498..3178681) Serratia proteamaculans 568 5603297 YP_001479123.1 CDS Spro_2894 NC_009832.1 3178710 3179843 R PFAM: polysaccharide export protein; KEGG: eca:ECA1417 putative polysaccharide export protein; polysaccharide export protein complement(3178710..3179843) Serratia proteamaculans 568 5603298 YP_001479124.1 CDS Spro_2895 NC_009832.1 3179889 3180938 R TIGRFAM: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase; PFAM: glycosyl transferase family 4; KEGG: eca:ECA1416 undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase complement(3179889..3180938) Serratia proteamaculans 568 5603302 YP_001479125.1 CDS Spro_2896 NC_009832.1 3181119 3182075 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: tde:TDE1439 epimerase/dehydratase, putative; NAD-dependent epimerase/dehydratase complement(3181119..3182075) Serratia proteamaculans 568 5603303 YP_001479126.1 CDS Spro_2897 NC_009832.1 3182257 3183156 R PFAM: transcriptional regulator domain protein; KEGG: vvy:VVA0492 hypothetical protein; transcriptional regulator CadC complement(3182257..3183156) Serratia proteamaculans 568 5603304 YP_001479127.1 CDS Spro_2898 NC_009832.1 3183925 3185313 R TIGRFAM: nitrite transporter; PFAM: major facilitator superfamily MFS_1; KEGG: spt:SPA1108 nitrite extrusion protein (nitrite facilitator); nitrite transporter complement(3183925..3185313) Serratia proteamaculans 568 5603313 YP_001479128.1 CDS Spro_2899 NC_009832.1 3185676 3187460 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: eca:ECA2029 nitrate/nitrite sensor kinase; nitrate/nitrite sensor protein NarX 3185676..3187460 Serratia proteamaculans 568 5603314 YP_001479129.1 CDS Spro_2900 NC_009832.1 3187472 3188122 D two-component response regulator NarL; phosphorylated by NarQ; activates transcription of nitrate and nitrite reductase genes and represses transcription of fumarate reductase; transcriptional regulator NarL 3187472..3188122 Serratia proteamaculans 568 5603315 YP_001479130.1 CDS Spro_2901 NC_009832.1 3188119 3189612 R KEGG: ent:Ent638_2319 putative invasin; hypothetical protein complement(3188119..3189612) Serratia proteamaculans 568 5603316 YP_001479131.1 CDS Spro_2902 NC_009832.1 3190133 3190834 D PFAM: peptidase A24A prepilin type IV; KEGG: yen:YE3574 type 4 prepilin-like proteins leader peptide processing enzyme; peptidase A24A prepilin type IV 3190133..3190834 Serratia proteamaculans 568 5603317 YP_001479132.1 CDS Spro_2903 NC_009832.1 3190969 3191535 D PFAM: PEBP family protein; KEGG: reu:Reut_B3733 YbhB and YbcL; PEBP family protein 3190969..3191535 Serratia proteamaculans 568 5603318 YP_001479133.1 CDS Spro_2904 NC_009832.1 3191540 3192355 R TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: eca:ECA2989 uroporphyrin-III C-methyltransferase; uroporphyrin-III C-methyltransferase complement(3191540..3192355) Serratia proteamaculans 568 5603319 YP_001479134.1 CDS Spro_2905 NC_009832.1 3192369 3195020 R PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: eca:ECA2990 nitrate reductase; molybdopterin oxidoreductase complement(3192369..3195020) Serratia proteamaculans 568 5603320 YP_001479135.1 CDS Spro_2906 NC_009832.1 3195017 3199162 R TIGRFAM: nitrite reductase [NAD(P)H], large subunit; nitrite reductase [NAD(P)H], small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; Rieske [2Fe-2S] domain protein; nitrite and sulphite reductase 4Fe-4S region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: eca:ECA2991 nitrite reductase [NAD(P)H] large subunit; nitrite reductase (NAD(P)H), large subunit complement(3195017..3199162) Serratia proteamaculans 568 5603321 YP_001479136.1 CDS Spro_2907 NC_009832.1 3199173 3199961 R KEGG: eca:ECA2992 nitrate transport protein; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter related; SMART: AAA ATPase; nitrate ABC transporter ATPases C and D complement(3199173..3199961) Serratia proteamaculans 568 5603322 YP_001479137.1 CDS Spro_2908 NC_009832.1 3199971 3200867 R TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA2993 nitrate transporter permease component; nitrate ABC transporter inner membrane subunit complement(3199971..3200867) Serratia proteamaculans 568 5603323 YP_001479138.1 CDS Spro_2909 NC_009832.1 3200876 3202135 R KEGG: eca:ECA2994 nitrate-binding proteint; nitrate-binding proteint complement(3200876..3202135) Serratia proteamaculans 568 5603324 YP_001479139.1 CDS Spro_2910 NC_009832.1 3202640 3203920 R PFAM: ANTAR domain protein; Nitrate and nitrite sensing domain protein; KEGG: eca:ECA2995 nitrate-and nitrite-responsive positive regulator; response regulator receiver/ANTAR domain-containing protein complement(3202640..3203920) Serratia proteamaculans 568 5603325 YP_001479140.1 CDS Spro_2911 NC_009832.1 3203978 3205552 R PFAM: extracellular solute-binding protein family 5; KEGG: psp:PSPPH_2742 ABC transporter, periplasmic oligopeptide-binding protein; extracellular solute-binding protein complement(3203978..3205552) Serratia proteamaculans 568 5603326 YP_001479141.1 CDS Spro_2912 NC_009832.1 3205702 3206373 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmw:Mmwyl1_2060 ABC transporter related; ABC transporter-like protein complement(3205702..3206373) Serratia proteamaculans 568 5603327 YP_001479142.1 CDS Spro_2913 NC_009832.1 3206370 3207206 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmw:Mmwyl1_2059 ABC transporter related; ABC transporter-like protein complement(3206370..3207206) Serratia proteamaculans 568 5603328 YP_001479143.1 CDS Spro_2914 NC_009832.1 3207196 3208065 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmw:Mmwyl1_2058 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component complement(3207196..3208065) Serratia proteamaculans 568 5603329 YP_001479144.1 CDS Spro_2915 NC_009832.1 3208062 3209114 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmw:Mmwyl1_2057 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component complement(3208062..3209114) Serratia proteamaculans 568 5603330 YP_001479145.1 CDS Spro_2916 NC_009832.1 3209114 3210682 R PFAM: extracellular solute-binding protein family 5; KEGG: mmw:Mmwyl1_2056 extracellular solute-binding protein family 5; 4-phytase complement(3209114..3210682) Serratia proteamaculans 568 5603334 YP_001479146.1 CDS Spro_2917 NC_009832.1 3210859 3211812 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: yen:YE2474 putative LysR-family transcriptional regulatory protein; transcriptional regulator CysB-like protein complement(3210859..3211812) Serratia proteamaculans 568 5603335 YP_001479147.1 CDS Spro_2918 NC_009832.1 3212112 3212852 R PFAM: ChaC family protein; AIG2 family protein; KEGG: ecs:ECs1723 cation transport regulator; ChaC family protein complement(3212112..3212852) Serratia proteamaculans 568 5603336 YP_001479148.1 CDS Spro_2919 NC_009832.1 3213313 3214131 D PFAM: Siderophore-interacting protein; FAD-binding 9 siderophore-interacting domain protein; KEGG: yen:YE2476 hypothetical protein; FAD-binding 9 siderophore-interacting domain-containing protein 3213313..3214131 Serratia proteamaculans 568 5603346 YP_001479149.1 CDS Spro_2920 NC_009832.1 3214446 3215546 D TIGRFAM: calcium/proton exchanger; PFAM: sodium/calcium exchanger membrane region; KEGG: ypi:YpsIP31758_2124 calcium/proton antiporter; calcium/sodium:proton antiporter 3214446..3215546 Serratia proteamaculans 568 5603347 YP_001479150.1 CDS Spro_2921 NC_009832.1 3215597 3216547 R PFAM: Aspartyl/Asparaginyl beta-hydroxylase; KEGG: kpn:KPN_02997 hypothetical protein; aspartyl/asparaginyl beta-hydroxylase complement(3215597..3216547) Serratia proteamaculans 568 5603348 YP_001479151.1 CDS Spro_2922 NC_009832.1 3216919 3219252 D PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: dsy:DSY2332 putative anaerobic DMSO reductase chain A precursor; molybdopterin oxidoreductase 3216919..3219252 Serratia proteamaculans 568 5603349 YP_001479152.1 CDS Spro_2923 NC_009832.1 3219255 3219809 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dsy:DSY2331 putative anaerobic DMSO reductase chain B iron-sulfur subunit; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 3219255..3219809 Serratia proteamaculans 568 5603350 YP_001479153.1 CDS Spro_2924 NC_009832.1 3219815 3220684 D KEGG: dsy:DSY2330 putative anaerobic DMSO reductase chain C anchor subunit; putative anaerobic DMSO reductase chain C anchor subunit 3219815..3220684 Serratia proteamaculans 568 5603351 YP_001479154.1 CDS Spro_2925 NC_009832.1 3220756 3221541 R PFAM: PhoH family protein; KEGG: ypi:YpsIP31758_2125 putative PhoH protein; hypothetical protein complement(3220756..3221541) Serratia proteamaculans 568 5603352 YP_001479155.1 CDS Spro_2926 NC_009832.1 3222226 3224373 R PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ent:Ent638_2099 TonB-dependent siderophore receptor; TonB-dependent receptor complement(3222226..3224373) Serratia proteamaculans 568 5603353 YP_001479156.1 CDS Spro_2927 NC_009832.1 3224586 3225878 R TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: yps:YPTB1727 putative iron-dependent peroxidase; Dyp-type peroxidase family protein complement(3224586..3225878) Serratia proteamaculans 568 5603354 YP_001479157.1 CDS Spro_2928 NC_009832.1 3225889 3227025 R KEGG: yen:YE1939 hypothetical protein; hypothetical protein complement(3225889..3227025) Serratia proteamaculans 568 5603355 YP_001479158.1 CDS Spro_2929 NC_009832.1 3227044 3227889 R PFAM: iron permease FTR1; KEGG: ypp:YPDSF_1271 membrane protein; iron permease FTR1 complement(3227044..3227889) Serratia proteamaculans 568 5603356 YP_001479159.1 CDS Spro_2930 NC_009832.1 3228300 3229784 R TIGRFAM: SSS sodium solute transporter superfamily; sodium/proline symporter; PFAM: Na+/solute symporter; KEGG: yen:YE1934 proline permease; sodium/proline symporter complement(3228300..3229784) Serratia proteamaculans 568 5603357 YP_001479160.1 CDS putA NC_009832.1 3230331 3234302 D proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus; forms dimers and is a peripherally membrane-associated protein; trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 3230331..3234302 Serratia proteamaculans 568 5603358 YP_001479161.1 CDS Spro_2932 NC_009832.1 3234469 3234651 D PFAM: YcfA family protein; KEGG: ypn:YPN_2306 hypothetical protein; YcfA family protein 3234469..3234651 Serratia proteamaculans 568 5603359 YP_001479162.1 CDS Spro_2933 NC_009832.1 3234683 3235096 D PFAM: protein of unknown function UPF0150; KEGG: ypi:YpsIP31758_2305 hypothetical protein; hypothetical protein 3234683..3235096 Serratia proteamaculans 568 5603360 YP_001479163.1 CDS Spro_2934 NC_009832.1 3235128 3235880 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: yen:YE2514 putative amino-acid ABC transporter (ATP-binding protein); putative amino-acid ABC transporter ATP-binding protein YecC complement(3235128..3235880) Serratia proteamaculans 568 5603361 YP_001479164.1 CDS Spro_2935 NC_009832.1 3235884 3236546 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypi:YpsIP31758_2273 amino acid ABC transporter, permease protein; polar amino acid ABC transporter inner membrane subunit complement(3235884..3236546) Serratia proteamaculans 568 5603362 YP_001479165.1 CDS Spro_2936 NC_009832.1 3236546 3237343 R PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: yen:YE2516 putative cystine-binding periplasmic protein; cystine transporter subunit complement(3236546..3237343) Serratia proteamaculans 568 5603363 YP_001479166.1 CDS Spro_2937 NC_009832.1 3237461 3238453 R catalyzes the formation of pyruvate from D-cysteine; D-cysteine desulfhydrase complement(3237461..3238453) Serratia proteamaculans 568 5603371 YP_001479167.1 CDS Spro_2938 NC_009832.1 3238581 3239090 R expression activator of the class 2 type of flagellar operons, essential to achieve maximal cell motility; activator of type 1 fimbrial gene expression; cell density-responsive regulator; FliZ in Salmonella typhimurium induces HilA, an activator of invasion genes necessary to achieve full virulence; flagella biosynthesis protein FliZ complement(3238581..3239090) Serratia proteamaculans 568 5603372 YP_001479168.1 CDS fliA NC_009832.1 3239148 3239870 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes; flagellar biosynthesis sigma factor complement(3239148..3239870) Serratia proteamaculans 568 5603385 YP_001479169.1 CDS Spro_2940 NC_009832.1 3240055 3241293 R PFAM: flagellin domain protein; KEGG: stt:t0918 flagellin; flagellin domain-containing protein complement(3240055..3241293) Serratia proteamaculans 568 5603386 YP_001479170.1 CDS Spro_2941 NC_009832.1 3241575 3242972 D PFAM: flagellar hook-associated protein 2 domain protein; flagellar hook-associated 2 domain protein; flagellin hook IN repeat protein; KEGG: yen:YE2524 flagellar hook-associated protein 2; flagellar hook-associated 2 domain-containing protein 3241575..3242972 Serratia proteamaculans 568 5603387 YP_001479171.1 CDS fliS NC_009832.1 3243000 3243410 D flagellin specific chaperone; flagellar protein FliS 3243000..3243410 Serratia proteamaculans 568 5603391 YP_001479172.1 CDS Spro_2943 NC_009832.1 3243410 3243778 D binds flagellar cap subunits (FliD) and seems to prevents their oligomerization prior to its translocation through the flagellum-specific type III export pathway; acts as a repressor of flagellar class 2 operons by preventing FlhD2C2 to bind the promoter and inhibiting the FlhD2C2-dependent transcription; member of the type III cytoplasmic chaperone family; flagellar biosynthesis protein FliT 3243410..3243778 Serratia proteamaculans 568 5603392 YP_001479173.1 CDS Spro_2944 NC_009832.1 3244127 3244993 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: yen:YE2527 putative AraC-family transcriptional regulatory protein; AraC family transcriptional regulator 3244127..3244993 Serratia proteamaculans 568 5603393 YP_001479174.1 CDS Spro_2945 NC_009832.1 3245754 3246008 R hypothetical protein complement(3245754..3246008) Serratia proteamaculans 568 5603397 YP_001479175.1 CDS Spro_2946 NC_009832.1 3246469 3246783 R TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: eca:ECA1727 flagellar hook-basal body complex protein; flagellar hook-basal body complex subunit FliE complement(3246469..3246783) Serratia proteamaculans 568 5603398 YP_001479176.1 CDS fliF NC_009832.1 3247217 3248908 D the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein 3247217..3248908 Serratia proteamaculans 568 5603399 YP_001479177.1 CDS fliG NC_009832.1 3248905 3249897 D One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G 3248905..3249897 Serratia proteamaculans 568 5603400 YP_001479178.1 CDS fliH NC_009832.1 3249890 3250594 D binds to and inhibits the function of flagella specific ATPase FliI; flagellar assembly protein H 3249890..3250594 Serratia proteamaculans 568 5603401 YP_001479179.1 CDS fliI NC_009832.1 3250594 3251955 D involved in type III protein export during flagellum assembly; flagellum-specific ATP synthase 3250594..3251955 Serratia proteamaculans 568 5603402 YP_001479180.1 CDS fliJ NC_009832.1 3251978 3252424 D rod/hook and filament chaperone; flagellar biosynthesis chaperone 3251978..3252424 Serratia proteamaculans 568 5603437 YP_001479181.1 CDS Spro_2952 NC_009832.1 3252421 3253644 D PFAM: flagellar hook-length control protein; KEGG: ypi:YpsIP31758_2295 flagellar hook-length control protein; flagellar hook-length control protein 3252421..3253644 Serratia proteamaculans 568 5603438 YP_001479182.1 CDS fliL NC_009832.1 3253781 3254266 D interacts with cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring; flagellar basal body-associated protein FliL 3253781..3254266 Serratia proteamaculans 568 5603439 YP_001479183.1 CDS fliM NC_009832.1 3254272 3255273 D with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; flagellar motor switch protein FliM 3254272..3255273 Serratia proteamaculans 568 5603440 YP_001479184.1 CDS fliN NC_009832.1 3255270 3255683 D One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein FliN 3255270..3255683 Serratia proteamaculans 568 5603441 YP_001479185.1 CDS Spro_2956 NC_009832.1 3255683 3256105 D PFAM: flagellar biosynthesis protein FliO; KEGG: ypi:YpsIP31758_2301 flagellar protein FliO; flagellar biosynthesis protein FliO 3255683..3256105 Serratia proteamaculans 568 5603442 YP_001479186.1 CDS fliP NC_009832.1 3256102 3256926 D FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 3256102..3256926 Serratia proteamaculans 568 5603451 YP_001479187.1 CDS fliQ NC_009832.1 3256939 3257208 D with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliQ 3256939..3257208 Serratia proteamaculans 568 5603452 YP_001479188.1 CDS fliR NC_009832.1 3257211 3257993 D FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliR 3257211..3257993 Serratia proteamaculans 568 5603453 YP_001479189.1 CDS Spro_2960 NC_009832.1 3258858 3259817 R TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; KEGG: yen:YE2550 flagellar hook-associated protein 3; flagellar hook-associated protein 3 complement(3258858..3259817) Serratia proteamaculans 568 5603473 YP_001479190.1 CDS flgK NC_009832.1 3259876 3261522 R with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgK complement(3259876..3261522) Serratia proteamaculans 568 5603474 YP_001479191.1 CDS flgJ NC_009832.1 3261795 3262751 R Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space; flagellar rod assembly protein/muramidase FlgJ complement(3261795..3262751) Serratia proteamaculans 568 5603475 YP_001479192.1 CDS flgI NC_009832.1 3262751 3263851 R part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein complement(3262751..3263851) Serratia proteamaculans 568 5603476 YP_001479193.1 CDS flgH NC_009832.1 3263862 3264563 R part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod; flagellar basal body L-ring protein complement(3263862..3264563) Serratia proteamaculans 568 5603477 YP_001479194.1 CDS flgG NC_009832.1 3264799 3265581 R makes up the distal portion of the flagellar basal body rod; flagellar basal body rod protein FlgG complement(3264799..3265581) Serratia proteamaculans 568 5603478 YP_001479195.1 CDS Spro_2966 NC_009832.1 3265600 3266355 R FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; Yersinia contains two copies of this and other flagella genes; flagellar basal body rod protein FlgF complement(3265600..3266355) Serratia proteamaculans 568 5603482 YP_001479196.1 CDS flgE NC_009832.1 3266368 3267591 R the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE complement(3266368..3267591) Serratia proteamaculans 568 5603483 YP_001479197.1 CDS flgD NC_009832.1 3267662 3268339 R acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production; flagellar basal body rod modification protein complement(3267662..3268339) Serratia proteamaculans 568 5603484 YP_001479198.1 CDS flgC NC_009832.1 3268352 3268756 R with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC complement(3268352..3268756) Serratia proteamaculans 568 5603491 YP_001479199.1 CDS flgB NC_009832.1 3268762 3269175 R with FlgF and C makes up the proximal portion of the flagellar basal body rod; Vibrio parahaemolyticus protein is associated with the polar flagella; flagellar basal body rod protein FlgB complement(3268762..3269175) Serratia proteamaculans 568 5603492 YP_001479200.1 CDS Spro_2971 NC_009832.1 3269336 3269989 D PFAM: SAF domain protein; KEGG: yen:YE2561 flagella basal body P-ring formation protein FlgA; SAF domain-containing protein 3269336..3269989 Serratia proteamaculans 568 5603493 YP_001479201.1 CDS Spro_2972 NC_009832.1 3270112 3270438 D regulates the flagellar specific sigma28 transcription factor; anti-sigma-28 factor FlgM 3270112..3270438 Serratia proteamaculans 568 5603522 YP_001479202.1 CDS Spro_2973 NC_009832.1 3270485 3270919 D PFAM: FlgN family protein; KEGG: yen:YE2563 flagella synthesis protein FlgN; FlgN family protein 3270485..3270919 Serratia proteamaculans 568 5603523 YP_001479203.1 CDS Spro_2974 NC_009832.1 3271237 3271539 D KEGG: swi:Swit_0156 transcriptional regulator-like protein; XRE family transcriptional regulator 3271237..3271539 Serratia proteamaculans 568 5603524 YP_001479204.1 CDS Spro_2975 NC_009832.1 3271544 3271948 R PFAM: flagellar FlhE family protein; KEGG: ypi:YpsIP31758_2332 flagellar protein FlhE; flagellar FlhE family protein complement(3271544..3271948) Serratia proteamaculans 568 5603529 YP_001479205.1 CDS flhA NC_009832.1 3271948 3274026 R membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA complement(3271948..3274026) Serratia proteamaculans 568 5603530 YP_001479206.1 CDS flhB NC_009832.1 3274019 3275215 R membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; Yersinia has 2 copies of flhB; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thin flagella; flagellar biosynthesis protein FlhB complement(3274019..3275215) Serratia proteamaculans 568 5603531 YP_001479207.1 CDS Spro_2978 NC_009832.1 3275347 3275991 R cytosolic phosphatase which functions in the chemotaxis signal transduction complex by controlling the level of phosphorylated CheY through dephosphorylation; chemotaxis regulator CheZ complement(3275347..3275991) Serratia proteamaculans 568 5603720 YP_001479208.1 CDS Spro_2979 NC_009832.1 3276003 3276392 R chemotaxis regulator that, when phosphorylated, interacts with the flagellar motor causing the flagella to spin clockwise which causes the cell to tumble; chemotaxis regulatory protein CheY complement(3276003..3276392) Serratia proteamaculans 568 5603721 YP_001479209.1 CDS Spro_2980 NC_009832.1 3276644 3277693 R regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase complement(3276644..3277693) Serratia proteamaculans 568 5603722 YP_001479210.1 CDS Spro_2981 NC_009832.1 3277693 3278565 R methylates the MCP; chemotaxis methyltransferase CheR complement(3277693..3278565) Serratia proteamaculans 568 5603726 YP_001479211.1 CDS Spro_2982 NC_009832.1 3278594 3280219 R PFAM: ligand binding Tar domain protein; histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: yen:YE2573 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(3278594..3280219) Serratia proteamaculans 568 5603727 YP_001479212.1 CDS Spro_2983 NC_009832.1 3280355 3282025 R PFAM: ligand binding Tar domain protein; histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: yen:YE2575 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(3280355..3282025) Serratia proteamaculans 568 5603728 YP_001479213.1 CDS Spro_2984 NC_009832.1 3282384 3282884 R PFAM: CheW domain protein; KEGG: ypi:YpsIP31758_1639 chemotaxis protein CheW; purine-binding chemotaxis protein complement(3282384..3282884) Serratia proteamaculans 568 5603770 YP_001479214.1 CDS Spro_2985 NC_009832.1 3282917 3284884 R chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY; sensory histidine kinase/signal sensing protein; CheA is the histidine kinase component; chemotaxis protein CheA complement(3282917..3284884) Serratia proteamaculans 568 5603771 YP_001479215.1 CDS Spro_2986 NC_009832.1 3284895 3285860 R PFAM: OmpA/MotB domain protein; KEGG: yen:YE2578 chemotaxis MotB protein; OmpA/MotB domain-containing protein complement(3284895..3285860) Serratia proteamaculans 568 5603772 YP_001479216.1 CDS Spro_2987 NC_009832.1 3285857 3286753 R With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotA complement(3285857..3286753) Serratia proteamaculans 568 5603799 YP_001479217.1 CDS Spro_2988 NC_009832.1 3286906 3287487 R With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems; transcriptional activator FlhC complement(3286906..3287487) Serratia proteamaculans 568 5603800 YP_001479218.1 CDS Spro_2989 NC_009832.1 3287490 3287840 R with FlhC is involved in the activation of class 2 flagellar genes and is involved in the regulation of a number of other genetic systems; transcriptional activator FlhD complement(3287490..3287840) Serratia proteamaculans 568 5603801 YP_001479219.1 CDS Spro_2990 NC_009832.1 3289221 3289436 D PFAM: Haemolysin expression modulating family protein; KEGG: ecp:ECP_1570 hypothetical protein YdgT; hemolysin expression modulating family protein 3289221..3289436 Serratia proteamaculans 568 5603842 YP_001479220.1 CDS Spro_2991 NC_009832.1 3289587 3290006 D ppGpp-dependent; membrane-associated, stress protein produced under conditions of nutrient deprivation, osmotic shock and oxidative stress; universal stress protein UspC 3289587..3290006 Serratia proteamaculans 568 5603843 YP_001479221.1 CDS Spro_2992 NC_009832.1 3290083 3291117 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: yen:YE2584 putative oxidoreductase; alcohol dehydrogenase 3290083..3291117 Serratia proteamaculans 568 5603844 YP_001479222.1 CDS Spro_2993 NC_009832.1 3291233 3291880 R KEGG: rso:RSp0259 probable pyrrolidone-carboxylate peptidase protein; TIGRFAM: pyrrolidone-carboxylate peptidase; PFAM: peptidase C15 pyroglutamyl peptidase I; pyrrolidone-carboxylate peptidase complement(3291233..3291880) Serratia proteamaculans 568 5603850 YP_001479223.1 CDS Spro_2994 NC_009832.1 3291978 3292910 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bra:BRADO6255 putative transcriptional regulatory protein, LysR-family; LysR family transcriptional regulator 3291978..3292910 Serratia proteamaculans 568 5603851 YP_001479224.1 CDS Spro_2995 NC_009832.1 3293668 3293955 D hypothetical protein 3293668..3293955 Serratia proteamaculans 568 5603852 YP_001479225.1 CDS Spro_2996 NC_009832.1 3294022 3294522 D hypothetical protein 3294022..3294522 Serratia proteamaculans 568 5603856 YP_001479226.1 CDS Spro_2997 NC_009832.1 3294549 3295079 D KEGG: bpa:BPP0727 putative lipoprotein; putative lipoprotein 3294549..3295079 Serratia proteamaculans 568 5603857 YP_001479227.1 CDS Spro_2998 NC_009832.1 3295120 3296466 D PFAM: protein of unknown function DUF876; KEGG: bbr:BB0814 hypothetical protein; hypothetical protein 3295120..3296466 Serratia proteamaculans 568 5603858 YP_001479228.1 CDS Spro_2999 NC_009832.1 3296470 3297690 D PFAM: OmpA/MotB domain protein; KEGG: bbr:BB0815 hypothetical protein; hypothetical protein 3296470..3297690 Serratia proteamaculans 568 5603877 YP_001479229.1 CDS Spro_3000 NC_009832.1 3297690 3301328 D PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: bbr:BB0816 hypothetical protein; ImcF domain-containing protein 3297690..3301328 Serratia proteamaculans 568 5603878 YP_001479230.1 CDS Spro_3001 NC_009832.1 3301343 3302065 D KEGG: bbr:BB0817 hypothetical protein; hypothetical protein 3301343..3302065 Serratia proteamaculans 568 5603879 YP_001479231.1 CDS Spro_3002 NC_009832.1 3302089 3303114 D PFAM: ImpA domain protein; KEGG: bbr:BB0799 hypothetical protein; ImpA domain-containing protein 3302089..3303114 Serratia proteamaculans 568 5603880 YP_001479232.1 CDS Spro_3003 NC_009832.1 3303219 3303755 D PFAM: conserved hypothetical protein; KEGG: azo:azo3895 putative cytoplasmic protein,SciH; hypothetical protein 3303219..3303755 Serratia proteamaculans 568 5603881 YP_001479233.1 CDS Spro_3004 NC_009832.1 3303759 3305264 D PFAM: protein of unknown function DUF877; KEGG: bbr:BB0801 hypothetical protein; hypothetical protein 3303759..3305264 Serratia proteamaculans 568 5603882 YP_001479234.1 CDS Spro_3005 NC_009832.1 3305545 3306027 D PFAM: protein of unknown function DUF796; KEGG: aav:Aave_1465 protein of unknown function DUF796; hypothetical protein 3305545..3306027 Serratia proteamaculans 568 5603889 YP_001479235.1 CDS Spro_3006 NC_009832.1 3306251 3307969 D PFAM: Forkhead-associated protein; KEGG: azo:azo3884 hypothetical regulatory protein; FHA domain-containing protein 3306251..3307969 Serratia proteamaculans 568 5603890 YP_001479236.1 CDS Spro_3007 NC_009832.1 3307969 3308742 D PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: aav:Aave_1469 protein serine/threonine phosphatase; protein serine/threonine phosphatase 3307969..3308742 Serratia proteamaculans 568 5603891 YP_001479237.1 CDS Spro_3008 NC_009832.1 3308773 3309759 D hypothetical protein 3308773..3309759 Serratia proteamaculans 568 5603965 YP_001479238.1 CDS Spro_3009 NC_009832.1 3309777 3310592 D PFAM: virulence protein SciE type; KEGG: bbr:BB0803 hypothetical protein; virulence protein SciE type 3309777..3310592 Serratia proteamaculans 568 5603966 YP_001479239.1 CDS Spro_3010 NC_009832.1 3310595 3311170 D PFAM: GPW/gp25 family protein; KEGG: bbr:BB0804 hypothetical protein; GPW/gp25 family protein 3310595..3311170 Serratia proteamaculans 568 5603967 YP_001479240.1 CDS Spro_3011 NC_009832.1 3311175 3313061 D PFAM: protein of unknown function DUF879; KEGG: bbr:BB0805 hypothetical protein; hypothetical protein 3311175..3313061 Serratia proteamaculans 568 5604012 YP_001479241.1 CDS Spro_3012 NC_009832.1 3313058 3314131 D PFAM: protein of unknown function DUF1305; KEGG: bbr:BB0807 hypothetical protein; hypothetical protein 3313058..3314131 Serratia proteamaculans 568 5604013 YP_001479242.1 CDS Spro_3013 NC_009832.1 3314184 3316847 D PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: pmy:Pmen_2331 ATPase AAA-2 domain protein; ATPase 3314184..3316847 Serratia proteamaculans 568 5604014 YP_001479243.1 CDS Spro_3014 NC_009832.1 3316896 3318338 D SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: azo:azo3888 putative serine/threonine kinase; serine/threonine protein kinase 3316896..3318338 Serratia proteamaculans 568 5604027 YP_001479244.1 CDS Spro_3015 NC_009832.1 3318424 3320361 D PFAM: Rhs element Vgr protein; KEGG: bbr:BB0793 hypothetical protein; Rhs element Vgr protein 3318424..3320361 Serratia proteamaculans 568 5604028 YP_001479245.1 CDS Spro_3016 NC_009832.1 3320375 3321181 D PFAM: Domain of unknown function DUF1795; KEGG: rso:RSc3427 hypothetical protein; hypothetical protein 3320375..3321181 Serratia proteamaculans 568 5604038 YP_001479246.1 CDS Spro_3017 NC_009832.1 3321185 3322519 D PFAM: PAAR repeat-containing protein; KEGG: rso:RSc3426 probable transmembrane protein; PAAR repeat-containing protein 3321185..3322519 Serratia proteamaculans 568 5604039 YP_001479247.1 CDS Spro_3018 NC_009832.1 3322516 3323616 D PFAM: ADP-ribosylation/Crystallin J1; KEGG: ppf:Pput_1073 ADP-ribosyl-(dinitrogen reductase) hydrolase; ADP-ribosyl-(dinitrogen reductase) hydrolase 3322516..3323616 Serratia proteamaculans 568 5604040 YP_001479248.1 CDS Spro_3019 NC_009832.1 3324102 3324584 D PFAM: protein of unknown function DUF796; KEGG: bpa:BPP0716 hypothetical protein; hypothetical protein 3324102..3324584 Serratia proteamaculans 568 5604041 YP_001479249.1 CDS Spro_3020 NC_009832.1 3324599 3325507 D hypothetical protein 3324599..3325507 Serratia proteamaculans 568 5604042 YP_001479250.1 CDS Spro_3021 NC_009832.1 3325601 3326071 R PFAM: transcription activator effector binding; KEGG: yen:YE2070 DNA gyrase inhibitory protein; DNA gyrase inhibitor complement(3325601..3326071) Serratia proteamaculans 568 5604043 YP_001479251.1 CDS Spro_3022 NC_009832.1 3326104 3326946 R PFAM: tryptophan 23-dioxygenase; KEGG: mxa:MXAN_7400 putative tryptophan 2,3-dioxygenase; tryptophan 23-dioxygenase complement(3326104..3326946) Serratia proteamaculans 568 5604053 YP_001479252.1 CDS Spro_3023 NC_009832.1 3327144 3327659 R PFAM: MaoC domain protein dehydratase; KEGG: stp:Strop_0462 MaoC domain protein dehydratase; dehydratase complement(3327144..3327659) Serratia proteamaculans 568 5604054 YP_001479253.1 CDS Spro_3024 NC_009832.1 3327653 3328609 R PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: stp:Strop_0460 ornithine cyclodeaminase/mu-crystallin; ornithine cyclodeaminase complement(3327653..3328609) Serratia proteamaculans 568 5604055 YP_001479254.1 CDS Spro_3025 NC_009832.1 3328606 3329607 R catalyzes the formation of pyruvate and acetaldehyde from 4-hydroxy-2-ketovaleric acid; involved in the degradation of phenylpropionate; 4-hydroxy-2-ketovalerate aldolase complement(3328606..3329607) Serratia proteamaculans 568 5604073 YP_001479255.1 CDS Spro_3026 NC_009832.1 3329591 3330478 R catalyzes the formation of acetyl-CoA from acetalaldehyde; acetaldehyde dehydrogenase complement(3329591..3330478) Serratia proteamaculans 568 5604074 YP_001479256.1 CDS Spro_3027 NC_009832.1 3330475 3331338 R PFAM: HpcH/HpaI aldolase; KEGG: stp:Strop_0459 HpcH/HpaI aldolase; HpcH/HpaI aldolase complement(3330475..3331338) Serratia proteamaculans 568 5604075 YP_001479257.1 CDS Spro_3028 NC_009832.1 3331335 3332558 R PFAM: aminotransferase class I and II; KEGG: stp:Strop_0458 aminotransferase, class I and II; hypothetical protein complement(3331335..3332558) Serratia proteamaculans 568 5604085 YP_001479258.1 CDS Spro_3029 NC_009832.1 3332558 3333397 R KEGG: stp:Strop_0457 transcription factor jumonji, JmjC domain protein; transcription factor jumonji domain-containing protein complement(3332558..3333397) Serratia proteamaculans 568 5604086 YP_001479259.1 CDS Spro_3030 NC_009832.1 3333457 3334683 R PFAM: major facilitator superfamily MFS_1; KEGG: ent:Ent638_2693 major facilitator superfamily MFS_1; major facilitator transporter complement(3333457..3334683) Serratia proteamaculans 568 5604087 YP_001479260.1 CDS Spro_3031 NC_009832.1 3335216 3336433 D PFAM: creatinase; peptidase M24; KEGG: sfr:Sfri_3046 peptidase M24; peptidase M24 3335216..3336433 Serratia proteamaculans 568 5604103 YP_001479261.1 CDS Spro_3032 NC_009832.1 3337535 3339067 R Required for the expression of anaerobic nitric oxide (NO) reductase; acts as a transcriptional activator for the norVW operon; anaerobic nitric oxide reductase transcription regulator complement(3337535..3339067) Serratia proteamaculans 568 5604104 YP_001479262.1 CDS Spro_3033 NC_009832.1 3339222 3340679 D detoxifies nitric oxide using NADH; anaerobic nitric oxide reductase flavorubredoxin 3339222..3340679 Serratia proteamaculans 568 5604105 YP_001479263.1 CDS Spro_3034 NC_009832.1 3340676 3341815 D catalyzes the reduction of the rubredoxin moiety of nitric oxide reductase; nitric oxide reductase 3340676..3341815 Serratia proteamaculans 568 5604109 YP_001479264.1 CDS Spro_3035 NC_009832.1 3342282 3345308 D TIGRFAM: outer membrane autotransporter barrel domain; PFAM: Pertactin; Autotransporter beta- domain protein; KEGG: psb:Psyr_2034 outer membrane autotransporter barrel; outer membrane autotransporter 3342282..3345308 Serratia proteamaculans 568 5604110 YP_001479265.1 CDS Spro_3036 NC_009832.1 3345422 3346255 R TIGRFAM: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family; PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: kpn:KPN_01537 putative transcriptional repressor (IclR family); IclR family transcriptional regulator complement(3345422..3346255) Serratia proteamaculans 568 5604111 YP_001479266.1 CDS Spro_3037 NC_009832.1 3346435 3347121 D KEGG: kpn:KPN_01538 acetyl-CoA:acetoacetyl-CoA transferase alpha subunit; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit A 3346435..3347121 Serratia proteamaculans 568 5604118 YP_001479267.1 CDS Spro_3038 NC_009832.1 3347133 3347813 D KEGG: kpn:KPN_01539 acetyl-CoA:acetoacetyl-CoA transferase beta subunit; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit B 3347133..3347813 Serratia proteamaculans 568 5604119 YP_001479268.1 CDS Spro_3039 NC_009832.1 3347791 3348993 D TIGRFAM: acetyl-CoA acetyltransferase; beta-ketoadipyl CoA thiolase; PFAM: Thiolase; KEGG: kpn:KPN_01540 acetyl-CoA acetyltransferase; beta-ketoadipyl CoA thiolase 3347791..3348993 Serratia proteamaculans 568 5604120 YP_001479269.1 CDS Spro_3040 NC_009832.1 3349008 3349769 D TIGRFAM: 3-oxoadipate enol-lactonase; PFAM: alpha/beta hydrolase fold; KEGG: kpn:KPN_01542 putative 3-oxoadipate enol-lactonase II; 3-oxoadipate enol-lactonase 3349008..3349769 Serratia proteamaculans 568 5604121 YP_001479270.1 CDS Spro_3041 NC_009832.1 3349902 3350081 D hypothetical protein 3349902..3350081 Serratia proteamaculans 568 5604122 YP_001479271.1 CDS Spro_3042 NC_009832.1 3350255 3350896 D KEGG: fjo:Fjoh_2212 hypothetical protein; hypothetical protein 3350255..3350896 Serratia proteamaculans 568 5604123 YP_001479272.1 CDS Spro_3043 NC_009832.1 3350899 3351672 D KEGG: csa:Csal_1644 hypothetical protein; hypothetical protein 3350899..3351672 Serratia proteamaculans 568 5604136 YP_001479273.1 CDS Spro_3044 NC_009832.1 3351700 3354399 R TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; magnesium-translocating P-type ATPase; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: ypp:YPDSF_1786 Mg(2+) transport ATPase protein B; magnesium-translocating P-type ATPase complement(3351700..3354399) Serratia proteamaculans 568 5604137 YP_001479274.1 CDS Spro_3045 NC_009832.1 3354598 3355296 R PFAM: MgtC/SapB transporter; KEGG: yen:YE2586 Mg(2+) transport ATPase protein C; MgtC/SapB transporter complement(3354598..3355296) Serratia proteamaculans 568 5604138 YP_001479275.1 CDS Spro_3046 NC_009832.1 3355811 3357994 D KEGG: aha:AHA_0614 hypothetical protein; hypothetical protein 3355811..3357994 Serratia proteamaculans 568 5604145 YP_001479276.1 CDS Spro_3047 NC_009832.1 3358057 3359445 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: pfo:Pfl_4383 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 3358057..3359445 Serratia proteamaculans 568 5604146 YP_001479277.1 CDS Spro_3048 NC_009832.1 3359448 3360320 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bbr:BB1863 putative LysR-family transcriptional regulator; LysR family transcriptional regulator complement(3359448..3360320) Serratia proteamaculans 568 5604147 YP_001479278.1 CDS Spro_3049 NC_009832.1 3360421 3361836 D PFAM: Pyridoxal-dependent decarboxylase; KEGG: sen:SACE_3828 putative amino acid decarboxylase,pyridoxal-dependent protein; pyridoxal-dependent decarboxylase 3360421..3361836 Serratia proteamaculans 568 5604157 YP_001479279.1 CDS Spro_3050 NC_009832.1 3362578 3363207 D PFAM: regulatory protein LuxR; KEGG: sgl:SG1239 colanic acid capsular biosynthesis activation protein A; LuxR family transcriptional regulator 3362578..3363207 Serratia proteamaculans 568 5604158 YP_001479280.1 CDS Spro_3051 NC_009832.1 3363420 3363635 R KEGG: eca:ECA1682 hypothetical protein; hypothetical protein complement(3363420..3363635) Serratia proteamaculans 568 5604159 YP_001479281.1 CDS Spro_3052 NC_009832.1 3363980 3364192 R PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: yen:YE2590 cold shock-like protein CspC2; cold-shock DNA-binding domain-containing protein complement(3363980..3364192) Serratia proteamaculans 568 5604182 YP_001479282.1 CDS Spro_3053 NC_009832.1 3364477 3365343 R PFAM: Ion transport protein; Ion transport 2 domain protein; KEGG: ent:Ent638_2297 ion transport protein; Ion transport protein complement(3364477..3365343) Serratia proteamaculans 568 5604183 YP_001479283.1 CDS Spro_3054 NC_009832.1 3365497 3365880 D hypothetical protein 3365497..3365880 Serratia proteamaculans 568 5604184 YP_001479284.1 CDS Spro_3055 NC_009832.1 3366391 3366600 D KEGG: kpn:KPN_00420 hypothetical protein; hypothetical protein 3366391..3366600 Serratia proteamaculans 568 5604220 YP_001479285.1 CDS Spro_3056 NC_009832.1 3366759 3367766 D TIGRFAM: Quinone oxidoreductase putative PIG3; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ypi:YpsIP31758_1628 putative NAD(P)H quinone oxidoreductase, PIG3 family; quinone oxidoreductase 3366759..3367766 Serratia proteamaculans 568 5604221 YP_001479286.1 CDS Spro_3057 NC_009832.1 3367807 3368886 R PFAM: Endonuclease/exonuclease/phosphatase; KEGG: psa:PST_1930 hypothetical protein; endonuclease/exonuclease/phosphatase complement(3367807..3368886) Serratia proteamaculans 568 5604222 YP_001479287.1 CDS Spro_3058 NC_009832.1 3368996 3370048 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: rha:RHA1_ro02434 hypothetical protein; NAD-dependent epimerase/dehydratase complement(3368996..3370048) Serratia proteamaculans 568 5604223 YP_001479288.1 CDS Spro_3059 NC_009832.1 3370164 3371096 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bra:BRADO3708 putative transcriptional regulatory protein, LysR family; LysR family transcriptional regulator 3370164..3371096 Serratia proteamaculans 568 5604224 YP_001479289.1 CDS Spro_3060 NC_009832.1 3371100 3371489 R PFAM: protein of unknown function DUF937; KEGG: bte:BTH_I2206 bacterial protein of unknown function (DUF937) family; hypothetical protein complement(3371100..3371489) Serratia proteamaculans 568 5604225 YP_001479290.1 CDS Spro_3061 NC_009832.1 3371584 3371832 R PFAM: Transglycosylase-associated protein; KEGG: ypi:YpsIP31758_2800 hypothetical protein; hypothetical protein complement(3371584..3371832) Serratia proteamaculans 568 5604231 YP_001479291.1 CDS Spro_3062 NC_009832.1 3372329 3373231 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A5815 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(3372329..3373231) Serratia proteamaculans 568 5604232 YP_001479292.1 CDS Spro_3063 NC_009832.1 3373285 3374058 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: atc:AGR_L_1000 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(3373285..3374058) Serratia proteamaculans 568 5604233 YP_001479293.1 CDS Spro_3064 NC_009832.1 3374330 3374746 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; 3-demethylubiquinone-9 3-methyltransferase; KEGG: bpd:BURPS668_1165 VOC metalloenzyme family protein; 3-demethylubiquinone-9 3-methyltransferase 3374330..3374746 Serratia proteamaculans 568 5604272 YP_001479294.1 CDS Spro_3065 NC_009832.1 3374801 3374995 R hypothetical protein complement(3374801..3374995) Serratia proteamaculans 568 5604273 YP_001479295.1 CDS Spro_3066 NC_009832.1 3375170 3376378 R KEGG: ecs:ECs3276 hypothetical protein; TIGRFAM: transposase, IS605 OrfB family; PFAM: putative transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB; IS605 family transposase OrfB complement(3375170..3376378) Serratia proteamaculans 568 5604274 YP_001479296.1 CDS Spro_3067 NC_009832.1 3376402 3376542 D KEGG: ece:Z5815 putative transposase; putative transposase 3376402..3376542 Serratia proteamaculans 568 5604301 YP_001479297.1 CDS Spro_3068 NC_009832.1 3376718 3378268 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: eca:ECA3148 putative regulator; diguanylate cyclase 3376718..3378268 Serratia proteamaculans 568 5604302 YP_001479298.1 CDS Spro_3069 NC_009832.1 3378591 3379487 D KEGG: ypi:YpsIP31758_1624 hypothetical protein; hypothetical protein 3378591..3379487 Serratia proteamaculans 568 5604303 YP_001479299.1 CDS Spro_3070 NC_009832.1 3379484 3380581 R PFAM: SMC domain protein; KEGG: cvi:CV_1280 hypothetical protein; SMC domain-containing protein complement(3379484..3380581) Serratia proteamaculans 568 5604306 YP_001479300.1 CDS Spro_3071 NC_009832.1 3380643 3382715 R catalyzes the ring cleavage reaction in phenylacetate degradation and the formation of 3-hydroxyacyl-CoA from crotonyl-CoA; bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase complement(3380643..3382715) Serratia proteamaculans 568 5604307 YP_001479301.1 CDS paaA NC_009832.1 3383034 3383972 D with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; phenylacetate-CoA oxygenase subunit PaaA 3383034..3383972 Serratia proteamaculans 568 5604308 YP_001479302.1 CDS paaB NC_009832.1 3383980 3384270 D with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; involved in phenylacetate degradation; phenylacetate-CoA oxygenase subunit PaaB 3383980..3384270 Serratia proteamaculans 568 5604318 YP_001479303.1 CDS Spro_3074 NC_009832.1 3384279 3385040 D TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit; PFAM: phenylacetic acid catabolic family protein; KEGG: kpn:KPN_01471 phenylacetic acid degradation protein; phenylacetate-CoA oxygenase subunit PaaI 3384279..3385040 Serratia proteamaculans 568 5604319 YP_001479304.1 CDS Spro_3075 NC_009832.1 3385050 3385547 D TIGRFAM: phenylacetate-CoA oxygenase, PaaJ subunit; PFAM: protein of unknown function DUF59; KEGG: eco:b1391 phenylacetic acid degradation protein; phenylacetate-CoA oxygenase subunit PaaJ 3385050..3385547 Serratia proteamaculans 568 5604320 YP_001479305.1 CDS Spro_3076 NC_009832.1 3385556 3386614 D TIGRFAM: phenylacetate-CoA oxygenase/reductase, PaaK subunit; PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: ecj:JW1387 predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation; phenylacetate-CoA oxygenase/reductase subunit PaaK 3385556..3386614 Serratia proteamaculans 568 5604327 YP_001479306.1 CDS Spro_3077 NC_009832.1 3386624 3387397 D PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ecj:JW1388 enoyl-CoA hydratase-isomerase; enoyl-CoA hydratase-isomerase 3386624..3387397 Serratia proteamaculans 568 5604328 YP_001479307.1 CDS Spro_3078 NC_009832.1 3387401 3388192 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 3387401..3388192 Serratia proteamaculans 568 5604329 YP_001479308.1 CDS Spro_3079 NC_009832.1 3388195 3389715 D converts 3-hydroxyadipyl-CoA to beta-ketoadipyl-CoA in phenylacetate degradation; 3-hydroxy-acyl-CoA dehydrogenase 3388195..3389715 Serratia proteamaculans 568 5604351 YP_001479309.1 CDS Spro_3080 NC_009832.1 3389712 3390152 D TIGRFAM: phenylacetic acid degradation protein PaaD; PFAM: thioesterase superfamily protein; KEGG: ecj:JW1391 predicted thioesterase; phenylacetic acid degradation protein PaaD 3389712..3390152 Serratia proteamaculans 568 5604352 YP_001479310.1 CDS Spro_3081 NC_009832.1 3390149 3391354 D catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA; beta-ketoadipyl CoA thiolase 3390149..3391354 Serratia proteamaculans 568 5604353 YP_001479311.1 CDS Spro_3082 NC_009832.1 3391369 3392679 D TIGRFAM: phenylacetate-CoA ligase; KEGG: kpn:KPN_01479 phenylacetate-CoA ligase; phenylacetate-CoA ligase 3391369..3392679 Serratia proteamaculans 568 5604357 YP_001479312.1 CDS Spro_3083 NC_009832.1 3392758 3393696 D TIGRFAM: phenylacetic acid degradation operon negative regulatory protein PaaX; PFAM: PaaX domain protein; PaaX domain protein domain; KEGG: ecj:JW1394 DNA-binding transcriptional regulator, aryl-CoA responsive; PaaX family transcriptional regulator 3392758..3393696 Serratia proteamaculans 568 5604358 YP_001479313.1 CDS Spro_3084 NC_009832.1 3393709 3394305 D TIGRFAM: phenylacetic acid degradation protein PaaY; KEGG: ecj:JW1395 predicted hexapeptide repeat acetyltransferase; phenylacetic acid degradation protein PaaY 3393709..3394305 Serratia proteamaculans 568 5604359 YP_001479314.1 CDS Spro_3086 NC_009832.1 3395932 3396834 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: pfl:PFL_2405 hypothetical protein; hypothetical protein complement(3395932..3396834) Serratia proteamaculans 568 5604420 YP_001479315.1 CDS Spro_3087 NC_009832.1 3396929 3398329 R PFAM: amino acid permease-associated region; KEGG: pfl:PFL_0763 amino acid permease; amino acid permease-associated protein complement(3396929..3398329) Serratia proteamaculans 568 5604370 YP_001479316.1 CDS Spro_3088 NC_009832.1 3398346 3399533 R catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase complement(3398346..3399533) Serratia proteamaculans 568 5604371 YP_001479317.1 CDS Spro_3089 NC_009832.1 3399593 3399964 R PFAM: Endoribonuclease L-PSP; KEGG: bur:Bcep18194_B3155 endoribonuclease L-PSP; endoribonuclease L-PSP complement(3399593..3399964) Serratia proteamaculans 568 5604384 YP_001479318.1 CDS Spro_3090 NC_009832.1 3399968 3400762 R KEGG: pde:Pden_5100 esterase/lipase-like protein; esterase/lipase-like protein complement(3399968..3400762) Serratia proteamaculans 568 5604385 YP_001479319.1 CDS Spro_3091 NC_009832.1 3400918 3401823 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mms:mma_2626 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(3400918..3401823) Serratia proteamaculans 568 5604386 YP_001479320.1 CDS Spro_3092 NC_009832.1 3401922 3402539 D PFAM: Glutathione S-transferase domain; KEGG: mag:amb1272 glutathione S-transferase; glutathione S-transferase domain-containing protein 3401922..3402539 Serratia proteamaculans 568 5604399 YP_001479321.1 CDS Spro_3093 NC_009832.1 3402545 3403459 D PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: mms:mma_2628 hypothetical protein; pyridoxamine 5'-phosphate oxidase-like protein 3402545..3403459 Serratia proteamaculans 568 5604400 YP_001479322.1 CDS Spro_3094 NC_009832.1 3403590 3403802 R PFAM: Glycogen synthesis protein; glycogen synthesis protein complement(3403590..3403802) Serratia proteamaculans 568 5604404 YP_001479323.1 CDS Spro_3095 NC_009832.1 3404020 3405495 D TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: acr:Acry_0274 succinic semialdehyde dehydrogenase; succinic semialdehyde dehydrogenase 3404020..3405495 Serratia proteamaculans 568 5604405 YP_001479324.1 CDS Spro_3096 NC_009832.1 3405556 3405918 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rme:Rmet_1778 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 3405556..3405918 Serratia proteamaculans 568 5604406 YP_001479325.1 CDS Spro_3097 NC_009832.1 3406002 3407918 R hypothetical protein complement(3406002..3407918) Serratia proteamaculans 568 5604516 YP_001479326.1 CDS Spro_3098 NC_009832.1 3408092 3408487 R PFAM: Cupin 2 conserved barrel domain protein; KEGG: eca:ECA3135 hypothetical protein; cupin 2 domain-containing protein complement(3408092..3408487) Serratia proteamaculans 568 5604517 YP_001479327.1 CDS Spro_3099 NC_009832.1 3408709 3409608 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: yen:YE3724 putative LysR-family transcriptional regulatory protein; LysR family transcriptional regulator 3408709..3409608 Serratia proteamaculans 568 5604518 YP_001479328.1 CDS Spro_3100 NC_009832.1 3409968 3412343 D PFAM: Pyrrolo-quinoline quinone; KEGG: stm:STM0169 glucose dehydrogenase; quinoprotein glucose dehydrogenase 3409968..3412343 Serratia proteamaculans 568 5604528 YP_001479329.1 CDS Spro_3101 NC_009832.1 3412468 3412848 D hypothetical protein 3412468..3412848 Serratia proteamaculans 568 5604529 YP_001479330.1 CDS Spro_3102 NC_009832.1 3412849 3414105 R TIGRFAM: oligosaccharide/H+ symporter, major facilitator superfamily (MFS); PFAM: proton/sugar symporter LacY; major facilitator superfamily MFS_1; KEGG: eca:ECA1489 lactose permease; major facilitator superfamily oligosaccharide/H+ symporter complement(3412849..3414105) Serratia proteamaculans 568 5604530 YP_001479331.1 CDS Spro_3103 NC_009832.1 3414186 3415493 R PFAM: glycoside hydrolase family 4; KEGG: bha:BH2228 melibiase (alpha-galactosidase); glycoside hydrolase family protein complement(3414186..3415493) Serratia proteamaculans 568 5604553 YP_001479332.1 CDS Spro_3104 NC_009832.1 3415694 3416542 D PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: cbe:Cbei_4446 transcriptional regulator, AraC family; AraC family transcriptional regulator 3415694..3416542 Serratia proteamaculans 568 5604554 YP_001479333.1 CDS Spro_3105 NC_009832.1 3416862 3417692 D PFAM: chitin-binding domain 3 protein; KEGG: vco:VC0395_1137 putative chitinase; chitin-binding domain-containing protein 3416862..3417692 Serratia proteamaculans 568 5604555 YP_001479334.1 CDS Spro_3106 NC_009832.1 3417742 3419196 R TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: stm:STM2013 putative transport protein; hypothetical protein complement(3417742..3419196) Serratia proteamaculans 568 5604556 YP_001479335.1 CDS Spro_3107 NC_009832.1 3419332 3419730 R KEGG: yen:YE3575 putative secretion protein; putative secretion protein complement(3419332..3419730) Serratia proteamaculans 568 5604557 YP_001479336.1 CDS Spro_3108 NC_009832.1 3419825 3420511 R PFAM: isochorismatase hydrolase; KEGG: sbl:Sbal_0487 isochorismatase hydrolase; isochorismatase hydrolase complement(3419825..3420511) Serratia proteamaculans 568 5604558 YP_001479337.1 CDS Spro_3109 NC_009832.1 3420676 3421638 D PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bxe:Bxe_A0705 transcriptional regulator, AraC family; AraC family transcriptional regulator 3420676..3421638 Serratia proteamaculans 568 5604568 YP_001479338.1 CDS Spro_3110 NC_009832.1 3421920 3422708 D PFAM: protein of unknown function DUF980; KEGG: yen:YE2610 hypothetical protein; hypothetical protein 3421920..3422708 Serratia proteamaculans 568 5603892 YP_001479339.1 CDS Spro_3111 NC_009832.1 3423037 3423654 R KEGG: eca:ECA1481 hypothetical protein; hypothetical protein complement(3423037..3423654) Serratia proteamaculans 568 5603893 YP_001479340.1 CDS Spro_3112 NC_009832.1 3424207 3426186 D PFAM: beta-lactamase domain protein; KEGG: spt:SPA1006 putative hydrolase; beta-lactamase domain-containing protein 3424207..3426186 Serratia proteamaculans 568 5604601 YP_001479341.1 CDS Spro_3113 NC_009832.1 3426239 3427030 D KEGG: mms:mma_2406 hypothetical protein; hypothetical protein 3426239..3427030 Serratia proteamaculans 568 5604602 YP_001479342.1 CDS Spro_3114 NC_009832.1 3427199 3428251 R PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: sme:SMb20366 putative transcriptional regulator protein; LacI family transcription regulator complement(3427199..3428251) Serratia proteamaculans 568 5604603 YP_001479343.1 CDS Spro_3115 NC_009832.1 3428459 3429487 D PFAM: extracellular solute-binding protein family 1; KEGG: bov:BOV_A0676 ABC transporter, periplasmic substrate-binding protein; extracellular solute-binding protein 3428459..3429487 Serratia proteamaculans 568 5604616 YP_001479344.1 CDS Spro_3116 NC_009832.1 3429596 3431821 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oan:Oant_3844 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 3429596..3431821 Serratia proteamaculans 568 5604617 YP_001479345.1 CDS Spro_3117 NC_009832.1 3431818 3432879 D PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: oan:Oant_3843 ABC transporter related; ABC transporter-like protein 3431818..3432879 Serratia proteamaculans 568 5604618 YP_001479346.1 CDS Spro_3118 NC_009832.1 3432904 3433692 D PFAM: inositol monophosphatase; KEGG: bme:BMEII0568 myo-inositol-1(or 4)-monophosphatase; inositol-phosphate phosphatase 3432904..3433692 Serratia proteamaculans 568 5604651 YP_001479347.1 CDS Spro_3119 NC_009832.1 3433741 3434751 R KEGG: kpn:KPN_01710 glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase complement(3433741..3434751) Serratia proteamaculans 568 5604652 YP_001479348.1 CDS Spro_3120 NC_009832.1 3434831 3435805 R PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: kpn:KPN_01709 putative helix-turn-helix, AraC type; AraC family transcriptional regulator complement(3434831..3435805) Serratia proteamaculans 568 5604653 YP_001479349.1 CDS Spro_3121 NC_009832.1 3435883 3436905 R PFAM: luciferase family protein; KEGG: eca:ECA3097 monooxygenase; luciferase family protein complement(3435883..3436905) Serratia proteamaculans 568 5604678 YP_001479350.1 CDS Spro_3122 NC_009832.1 3437242 3437922 D PFAM: TENA/THI-4 domain protein; KEGG: kpn:KPN_01799 putative ABC transporter; TenA family transcription regulator 3437242..3437922 Serratia proteamaculans 568 5604679 YP_001479351.1 CDS Spro_3123 NC_009832.1 3437919 3438674 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: kpn:KPN_01800 putative ABC transporter; ABC transporter-like protein 3437919..3438674 Serratia proteamaculans 568 5604680 YP_001479352.1 CDS Spro_3124 NC_009832.1 3438671 3439438 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kpn:KPN_01801 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 3438671..3439438 Serratia proteamaculans 568 5604790 YP_001479353.1 CDS Spro_3125 NC_009832.1 3439455 3440390 D PFAM: NLPA lipoprotein; NMT1/THI5 like domain protein; KEGG: hip:CGSHiEE_01225 thiamine biosynthesis protein; NMT1/THI5-like domain-containing protein 3439455..3440390 Serratia proteamaculans 568 5604791 YP_001479354.1 CDS Spro_3126 NC_009832.1 3440646 3442949 D catalyzes the transfer of phosphoglycerol to the glucan backbone; phosphoglycerol transferase I 3440646..3442949 Serratia proteamaculans 568 5604792 YP_001479355.1 CDS Spro_3127 NC_009832.1 3443103 3444563 D Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile; AMP nucleosidase 3443103..3444563 Serratia proteamaculans 568 5604831 YP_001479356.1 CDS Spro_3128 NC_009832.1 3444842 3445759 D PFAM: protein of unknown function UPF0187; KEGG: kpn:KPN_01826 hypothetical protein; hypothetical protein 3444842..3445759 Serratia proteamaculans 568 5604832 YP_001479357.1 CDS Spro_3129 NC_009832.1 3445776 3446699 R Transcriptional activator for the hut, put and ure operons and repressor for the gdh and gltB operons in response to nitrogen limitation; nitrogen assimilation transcriptional regulator complement(3445776..3446699) Serratia proteamaculans 568 5604833 YP_001479358.1 CDS Spro_3130 NC_009832.1 3446785 3447042 R hypothetical protein complement(3446785..3447042) Serratia proteamaculans 568 5604846 YP_001479359.1 CDS Spro_3131 NC_009832.1 3447499 3448428 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: psb:Psyr_2945 regulatory protein, LysR:LysR, substrate-binding; LysR family transcriptional regulator 3447499..3448428 Serratia proteamaculans 568 5607245 YP_001479360.1 CDS Spro_3132 NC_009832.1 3448591 3449760 D PFAM: major facilitator superfamily MFS_1; KEGG: sco:SCO3915 putative transmembrane efflux protein; major facilitator transporter 3448591..3449760 Serratia proteamaculans 568 5604848 YP_001479361.1 CDS Spro_3133 NC_009832.1 3450060 3450371 D KEGG: ent:Ent638_1881 hypothetical protein; hypothetical protein 3450060..3450371 Serratia proteamaculans 568 5604852 YP_001479362.1 CDS Spro_3134 NC_009832.1 3450741 3451019 D PFAM: transposase IS3/IS911 family protein; KEGG: psa:PST_3402 ISxac3 transposase; transposase IS3/IS911 family protein 3450741..3451019 Serratia proteamaculans 568 5604853 YP_001479363.1 CDS Spro_3135 NC_009832.1 3451040 3451891 D PFAM: Integrase catalytic region; KEGG: psa:PST_1859 transposase, IS3 family; Integrase catalytic subunit 3451040..3451891 Serratia proteamaculans 568 5604854 YP_001479364.1 CDS Spro_3136 NC_009832.1 3451903 3452244 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pau:PA14_49780 probable fosfomycin resistance protein; glutathione transferase complement(3451903..3452244) Serratia proteamaculans 568 5605038 YP_001479365.1 CDS Spro_3137 NC_009832.1 3452338 3453309 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: plu:plu2641 hypothetical protein; LysR family transcriptional regulator complement(3452338..3453309) Serratia proteamaculans 568 5605039 YP_001479366.1 CDS Spro_3138 NC_009832.1 3453445 3454647 D PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA3958 probable transporter; major facilitator transporter 3453445..3454647 Serratia proteamaculans 568 5605040 YP_001479367.1 CDS Spro_3139 NC_009832.1 3454798 3457887 R PFAM: acriflavin resistance protein; KEGG: ent:Ent638_1874 acriflavin resistance protein; acriflavin resistance protein complement(3454798..3457887) Serratia proteamaculans 568 5605047 YP_001479368.1 CDS Spro_3140 NC_009832.1 3457884 3458993 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: ent:Ent638_1873 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit complement(3457884..3458993) Serratia proteamaculans 568 5605048 YP_001479369.1 CDS Spro_3141 NC_009832.1 3459069 3459683 R PFAM: regulatory protein TetR; KEGG: eca:ECA2931 TetR-family transcriptional regulator; TetR family transcriptional regulator complement(3459069..3459683) Serratia proteamaculans 568 5605049 YP_001479370.1 CDS Spro_3142 NC_009832.1 3460198 3462636 D PFAM: peptidase S45 penicillin amidase; KEGG: swi:Swit_0920 peptidase S45, penicillin amidase; penicillin amidase 3460198..3462636 Serratia proteamaculans 568 5605081 YP_001479371.1 CDS Spro_3143 NC_009832.1 3462869 3463165 D KEGG: mmw:Mmwyl1_1177 hypothetical protein; hypothetical protein 3462869..3463165 Serratia proteamaculans 568 5605082 YP_001479372.1 CDS Spro_3144 NC_009832.1 3463184 3463783 D KEGG: mmw:Mmwyl1_1176 hypothetical protein; hypothetical protein 3463184..3463783 Serratia proteamaculans 568 5605083 YP_001479373.1 CDS Spro_3145 NC_009832.1 3463851 3464138 R KEGG: eca:ECA0060 hypothetical protein; hypothetical protein complement(3463851..3464138) Serratia proteamaculans 568 5605103 YP_001479374.1 CDS Spro_3146 NC_009832.1 3464292 3464894 R PFAM: nitroreductase; KEGG: psp:PSPPH_1550 nitroreductase family protein; nitroreductase complement(3464292..3464894) Serratia proteamaculans 568 5605104 YP_001479375.1 CDS Spro_3147 NC_009832.1 3464967 3465848 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bbr:BB2390 putative LysR-family transcriptional regulator; LysR family transcriptional regulator complement(3464967..3465848) Serratia proteamaculans 568 5605105 YP_001479376.1 CDS Spro_3148 NC_009832.1 3465970 3466605 D PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: bpe:BP2156 hypothetical protein; NAD(P)H dehydrogenase (quinone) 3465970..3466605 Serratia proteamaculans 568 5605148 YP_001479377.1 CDS Spro_3149 NC_009832.1 3466753 3467853 D PFAM: glycosyl transferase family 9; KEGG: sfu:Sfum_0372 glycosyl transferase, family 9; glycosyl transferase family protein 3466753..3467853 Serratia proteamaculans 568 5605149 YP_001479378.1 CDS Spro_3150 NC_009832.1 3467839 3469005 R PFAM: O-antigen polymerase; KEGG: sgl:SG0240 putative lipid A core surface polymer ligase; O-antigen polymerase complement(3467839..3469005) Serratia proteamaculans 568 5605150 YP_001479379.1 CDS Spro_3151 NC_009832.1 3468983 3469891 R KEGG: sgl:SG2197 putative lipopolysaccharide glycosyltransferase; putative lipopolysaccharide glycosyltransferase complement(3468983..3469891) Serratia proteamaculans 568 5605223 YP_001479380.1 CDS Spro_3152 NC_009832.1 3470154 3471272 R TIGRFAM: alkylhydroperoxidase like protein, AhpD family; uncharacterized peroxidase-related enzyme; PFAM: Carboxymuconolactone decarboxylase; KEGG: eca:ECA0070 hypothetical protein; peroxidase-like protein complement(3470154..3471272) Serratia proteamaculans 568 5605224 YP_001479381.1 CDS Spro_3153 NC_009832.1 3471269 3472315 R PFAM: luciferase family protein; KEGG: bbt:BBta_4850 hypothetical protein; luciferase family protein complement(3471269..3472315) Serratia proteamaculans 568 5605225 YP_001479382.1 CDS Spro_3154 NC_009832.1 3472305 3473978 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA0072 ABC transporter ATP-binding protein; ABC transporter-like protein complement(3472305..3473978) Serratia proteamaculans 568 5605261 YP_001479383.1 CDS Spro_3155 NC_009832.1 3473975 3474865 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA0073 ABC transporter permease protein; binding-protein-dependent transport systems inner membrane component complement(3473975..3474865) Serratia proteamaculans 568 5605262 YP_001479384.1 CDS Spro_3156 NC_009832.1 3474862 3475806 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA0074 ABC transporter permease protein; binding-protein-dependent transport systems inner membrane component complement(3474862..3475806) Serratia proteamaculans 568 5605263 YP_001479385.1 CDS Spro_3157 NC_009832.1 3475817 3477442 R PFAM: extracellular solute-binding protein family 5; KEGG: kpn:KPN_01854 nickel transport protein (ABC superfamily, peri_bind); extracellular solute-binding protein complement(3475817..3477442) Serratia proteamaculans 568 5605267 YP_001479386.1 CDS Spro_3158 NC_009832.1 3477618 3477866 D hypothetical protein 3477618..3477866 Serratia proteamaculans 568 5605268 YP_001479387.1 CDS Spro_3159 NC_009832.1 3477884 3478513 R PFAM: Threonyl/alanyl tRNA synthetase SAD; KEGG: pfo:Pfl_4187 metal-dependent hydrolase; threonyl/alanyl tRNA synthetase SAD complement(3477884..3478513) Serratia proteamaculans 568 5605269 YP_001479388.1 CDS Spro_3160 NC_009832.1 3478583 3479533 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfl:PFL_1767 transcriptional regulator, LysR family; LysR family transcriptional regulator 3478583..3479533 Serratia proteamaculans 568 5605270 YP_001479389.1 CDS Spro_3161 NC_009832.1 3479516 3480163 R PFAM: 2OG-Fe(II) oxygenase; KEGG: rpa:RPA1722 alkylated DNA repair protein; 2OG-Fe(II) oxygenase complement(3479516..3480163) Serratia proteamaculans 568 5605271 YP_001479390.1 CDS Spro_3162 NC_009832.1 3480304 3481188 D TIGRFAM: RarD protein, DMT superfamily transporter; KEGG: pen:PSEEN3058 chloramphenicol-sensitive protein RarD; transporter DMT superfamily protein 3480304..3481188 Serratia proteamaculans 568 5605272 YP_001479391.1 CDS Spro_3163 NC_009832.1 3481223 3481918 R PFAM: 4'-phosphopantetheinyl transferase; KEGG: eca:ECA0474 enterobactin synthetase component D (4'-phosphopantetheinyl transferase); 4'-phosphopantetheinyl transferase complement(3481223..3481918) Serratia proteamaculans 568 5605289 YP_001479392.1 CDS Spro_3164 NC_009832.1 3482022 3483251 R PFAM: histidine acid phosphatase; KEGG: ssn:SSON_1012 periplasmic glucose-1-phosphatase; glucose-1-phosphatase/inositol phosphatase complement(3482022..3483251) Serratia proteamaculans 568 5605290 YP_001479393.1 CDS Spro_3165 NC_009832.1 3483402 3484865 R TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; KEGG: yen:YE2647 citrate carrier; anion transporter complement(3483402..3484865) Serratia proteamaculans 568 5605291 YP_001479394.1 CDS Spro_3166 NC_009832.1 3484895 3485779 R PFAM: triphosphoribosyl-dephospho-CoA protein; KEGG: sec:SC0648 putative modifier of citrate lyase protein; triphosphoribosyl-dephospho-CoA synthase complement(3484895..3485779) Serratia proteamaculans 568 5605330 YP_001479395.1 CDS Spro_3167 NC_009832.1 3485757 3486305 R PFAM: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase; KEGG: yen:YE2649 putative apo-citrate lyase phosphoribosyl-dephospho-CoA transferase; Holo-ACP synthase complement(3485757..3486305) Serratia proteamaculans 568 5605331 YP_001479396.1 CDS Spro_3168 NC_009832.1 3486310 3487815 R KEGG: yen:YE2650 citrate lyase alpha chain; TIGRFAM: citrate lyase, alpha subunit; PFAM: Citrate lyase alpha subunit; citrate lyase subunit alpha complement(3486310..3487815) Serratia proteamaculans 568 5605332 YP_001479397.1 CDS Spro_3169 NC_009832.1 3487815 3488735 R KEGG: yen:YE2651 putative citrate lyase beta chain; TIGRFAM: citrate lyase, beta subunit; PFAM: HpcH/HpaI aldolase; citrate lyase subunit beta complement(3487815..3488735) Serratia proteamaculans 568 5605421 YP_001479398.1 CDS Spro_3170 NC_009832.1 3488719 3489027 R acyl carrier protein; with CitE and CitF catalyzes the formation of oxaloacetate from citrate; citrate lyase subunit gamma complement(3488719..3489027) Serratia proteamaculans 568 5605422 YP_001479399.1 CDS Spro_3171 NC_009832.1 3489024 3490097 R KEGG: yen:YE2653 [citrate [pro-3s]-lyase] ligase; TIGRFAM: cytidyltransferase-related domain; citrate lyase ligase; PFAM: GCN5-related N-acetyltransferase; Citrate lyase ligase domain protein; citrate lyase ligase complement(3489024..3490097) Serratia proteamaculans 568 5605500 YP_001479400.1 CDS Spro_3172 NC_009832.1 3490437 3491123 D PFAM: response regulator receiver; KEGG: yen:YE2655 response regulator protein; response regulator receiver/unknown domain-containing protein 3490437..3491123 Serratia proteamaculans 568 5605501 YP_001479401.1 CDS lacZ NC_009832.1 3491438 3494527 D forms a homotetramer; hydrolyzes lactose disaccharide to galactose and glucose; converts lactose to allolactose which is the natural inducer of the lac operon; beta-D-galactosidase 3491438..3494527 Serratia proteamaculans 568 5605502 YP_001479402.1 CDS Spro_3174 NC_009832.1 3495050 3495940 D PFAM: Ketopantoate reductase ApbA/PanE domain protein; KEGG: eca:ECA1579 probable ketopantoate reductase; 2-dehydropantoate 2-reductase 3495050..3495940 Serratia proteamaculans 568 5603106 YP_001479403.1 CDS Spro_3175 NC_009832.1 3496224 3497201 D PFAM: Domain of unknown function DUF1852; KEGG: eca:ECA3125 hypothetical protein; hypothetical protein 3496224..3497201 Serratia proteamaculans 568 5605510 YP_001479404.1 CDS Spro_3176 NC_009832.1 3497229 3498260 D catalyzes the formation of tetrahydropteroyl-L-glutamate and methionine from L-homocysteine and 5-methyltetrahydropteroyltri-L-glutamate; 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase 3497229..3498260 Serratia proteamaculans 568 5605511 YP_001479405.1 CDS Spro_3177 NC_009832.1 3498329 3498940 R PFAM: NAD(P)H dehydrogenase (quinone); KEGG: ecj:JW0884 conserved hypothetical protein; hypothetical protein complement(3498329..3498940) Serratia proteamaculans 568 5605560 YP_001479406.1 CDS Spro_3178 NC_009832.1 3499042 3499965 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sbo:SBO_2184 putative transcriptional regulator LysR-type; LysR family transcriptional regulator 3499042..3499965 Serratia proteamaculans 568 5605561 YP_001479407.1 CDS Spro_3179 NC_009832.1 3500271 3501566 D TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: kpn:KPN_02282 putative permease of the major facilitator superfamily; major facilitator superfamily metabolite/H(+) symporter 3500271..3501566 Serratia proteamaculans 568 5605562 YP_001479408.1 CDS Spro_3180 NC_009832.1 3501582 3502388 D PFAM: extracellular solute-binding protein family 1; KEGG: kpn:KPN_02281 molybdate transport protein (ABC superfamily, peri_bind); extracellular solute-binding protein 3501582..3502388 Serratia proteamaculans 568 5605586 YP_001479409.1 CDS Spro_3181 NC_009832.1 3502363 3503262 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: kpn:KPN_02280 putative transcriptional regulator (LysR family); LysR family transcriptional regulator complement(3502363..3503262) Serratia proteamaculans 568 5605587 YP_001479410.1 CDS Spro_3182 NC_009832.1 3503358 3504377 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ent:Ent638_2281 alcohol dehydrogenase, zinc-binding domain protein; alcohol dehydrogenase complement(3503358..3504377) Serratia proteamaculans 568 5605588 YP_001479411.1 CDS Spro_3183 NC_009832.1 3504438 3505220 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ent:Ent638_2278 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(3504438..3505220) Serratia proteamaculans 568 5605608 YP_001479412.1 CDS Spro_3184 NC_009832.1 3505406 3505966 D PFAM: regulatory protein TetR; KEGG: ent:Ent638_2276 transcriptional regulator, TetR family; TetR family transcriptional regulator 3505406..3505966 Serratia proteamaculans 568 5605609 YP_001479413.1 CDS Spro_3187 NC_009832.1 3507455 3508381 R this enzyme from Pyrococcus has carbamoyl phosphate synthetase activity even though the enzyme shows sequence and structural similarity to carbamate kinase; this enzyme using carbate and ATP to synthesize carbamoyl phosphate which may be a favorable reaction at the extreme temperatures these organisms live under; carbamate kinase-like carbamoyl phosphate synthetase complement(3507455..3508381) Serratia proteamaculans 568 5605654 YP_001479414.1 CDS Spro_3188 NC_009832.1 3508454 3509305 R PFAM: amidinotransferase; KEGG: ckl:CKL_2196 hypothetical protein; amidinotransferase complement(3508454..3509305) Serratia proteamaculans 568 5605655 YP_001479415.1 CDS Spro_3189 NC_009832.1 3509401 3510849 R PFAM: amino acid permease-associated region; KEGG: ctc:CTC00932 putative amino acid permease RocC; amino acid permease-associated protein complement(3509401..3510849) Serratia proteamaculans 568 5605656 YP_001479416.1 CDS Spro_3190 NC_009832.1 3510958 3511896 R TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; KEGG: pth:PTH_0506 ornithine carbamoyltransferase; ornithine carbamoyltransferase complement(3510958..3511896) Serratia proteamaculans 568 5605672 YP_001479417.1 CDS Spro_3191 NC_009832.1 3512105 3512998 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfl:PFL_2911 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(3512105..3512998) Serratia proteamaculans 568 5605673 YP_001479418.1 CDS Spro_3192 NC_009832.1 3513620 3515818 D TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase; KEGG: bch:Bcen2424_0726 catalase/peroxidase HPI; catalase/peroxidase HPI 3513620..3515818 Serratia proteamaculans 568 5605674 YP_001479419.1 CDS Spro_3193 NC_009832.1 3515876 3517294 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: kpn:KPN_01822 putative transport protein; major facilitator transporter complement(3515876..3517294) Serratia proteamaculans 568 5605715 YP_001479420.1 CDS Spro_3194 NC_009832.1 3517489 3518748 R PFAM: major facilitator superfamily MFS_1; KEGG: ent:Ent638_2000 major facilitator superfamily MFS_1; sugar efflux transporter complement(3517489..3518748) Serratia proteamaculans 568 5605716 YP_001479421.1 CDS Spro_3195 NC_009832.1 3518840 3519781 R PFAM: Xylose isomerase domain protein TIM barrel; KEGG: bsu:BG11855 unknown; xylose isomerase domain-containing protein complement(3518840..3519781) Serratia proteamaculans 568 5605717 YP_001479422.1 CDS Spro_3196 NC_009832.1 3519803 3520981 R PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bsu:BG12214 hypothetical protein; oxidoreductase domain-containing protein complement(3519803..3520981) Serratia proteamaculans 568 5605740 YP_001479423.1 CDS Spro_3197 NC_009832.1 3521303 3522334 D PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: mlo:mlr1005 transcriptional regulator; LacI family transcription regulator 3521303..3522334 Serratia proteamaculans 568 5605741 YP_001479424.1 CDS Spro_3198 NC_009832.1 3522382 3523068 D PFAM: Aspartyl/Asparaginyl beta-hydroxylase; KEGG: bch:Bcen2424_5163 aspartyl/asparaginyl beta-hydroxylase; aspartyl/asparaginyl beta-hydroxylase 3522382..3523068 Serratia proteamaculans 568 5605742 YP_001479425.1 CDS Spro_3199 NC_009832.1 3523065 3523769 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ent:Ent638_2495 ABC transporter related; ABC transporter-like protein complement(3523065..3523769) Serratia proteamaculans 568 5605982 YP_001479426.1 CDS Spro_3200 NC_009832.1 3523778 3524653 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ent:Ent638_2494 ABC transporter related; ABC transporter-like protein complement(3523778..3524653) Serratia proteamaculans 568 5605983 YP_001479427.1 CDS Spro_3201 NC_009832.1 3524650 3525936 R PFAM: inner-membrane translocator; KEGG: ent:Ent638_2493 inner-membrane translocator; inner-membrane translocator complement(3524650..3525936) Serratia proteamaculans 568 5605984 YP_001479428.1 CDS Spro_3202 NC_009832.1 3525947 3526963 R PFAM: inner-membrane translocator; KEGG: ent:Ent638_2492 inner-membrane translocator; inner-membrane translocator complement(3525947..3526963) Serratia proteamaculans 568 5605991 YP_001479429.1 CDS Spro_3203 NC_009832.1 3527012 3528130 R PFAM: Extracellular ligand-binding receptor; KEGG: ent:Ent638_2491 extracellular ligand-binding receptor; extracellular ligand-binding receptor complement(3527012..3528130) Serratia proteamaculans 568 5605992 YP_001479430.1 CDS Spro_3204 NC_009832.1 3528815 3530557 D KEGG: eca:ECA1632 hypothetical protein; hypothetical protein 3528815..3530557 Serratia proteamaculans 568 5603460 YP_001479431.1 CDS Spro_3205 NC_009832.1 3530730 3531683 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pae:PA2921 probable transcriptional regulator; LysR family transcriptional regulator complement(3530730..3531683) Serratia proteamaculans 568 5605998 YP_001479432.1 CDS Spro_3206 NC_009832.1 3531823 3532992 D KEGG: pau:PA14_26260 putative hydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 3531823..3532992 Serratia proteamaculans 568 5605999 YP_001479433.1 CDS Spro_3207 NC_009832.1 3533029 3533820 D PFAM: extracellular solute-binding protein family 3; KEGG: bur:Bcep18194_B2597 ABC amino acid transporter, periplasmic ligand binding protein; extracellular solute-binding protein 3533029..3533820 Serratia proteamaculans 568 5606000 YP_001479434.1 CDS Spro_3208 NC_009832.1 3533868 3534185 R PFAM: protein of unknown function DUF496; KEGG: ypi:YpsIP31758_2417 hypothetical protein; hypothetical protein complement(3533868..3534185) Serratia proteamaculans 568 5606007 YP_001479435.1 CDS Spro_3209 NC_009832.1 3534347 3535414 R KEGG: yen:YE2756 hypothetical protein; hypothetical protein complement(3534347..3535414) Serratia proteamaculans 568 5606008 YP_001479436.1 CDS Spro_3210 NC_009832.1 3535513 3536280 R PFAM: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: ypi:YpsIP31758_1649 N-acetylmuramoyl-L-alanine amidase, family 2; N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD complement(3535513..3536280) Serratia proteamaculans 568 5606009 YP_001479437.1 CDS Spro_3211 NC_009832.1 3536484 3537230 D PFAM: peptidase S24 and S26 domain protein; KEGG: sgl:SG1826 putative transcriptional regulator; putative phage repressor 3536484..3537230 Serratia proteamaculans 568 5606148 YP_001479438.1 CDS Spro_3212 NC_009832.1 3537273 3538397 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: kpn:KPN_03122 hemolysin F; hypothetical protein complement(3537273..3538397) Serratia proteamaculans 568 5606149 YP_001479439.1 CDS Spro_3213 NC_009832.1 3538926 3539117 D hypothetical protein 3538926..3539117 Serratia proteamaculans 568 5606150 YP_001479440.1 CDS sbcB NC_009832.1 3539217 3540644 D Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates; exonuclease I 3539217..3540644 Serratia proteamaculans 568 5606186 YP_001479441.1 CDS Spro_3215 NC_009832.1 3540700 3542067 R PFAM: amino acid permease-associated region; KEGG: eca:ECA2566 putative amino acid permease; amino acid permease-associated protein complement(3540700..3542067) Serratia proteamaculans 568 5606187 YP_001479442.1 CDS Spro_3216 NC_009832.1 3542601 3544019 R PFAM: glutamine synthetase catalytic region; KEGG: ecj:JW5201 gamma-Glu-putrescine synthase; glutamine synthetase catalytic region complement(3542601..3544019) Serratia proteamaculans 568 5606188 YP_001479443.1 CDS Spro_3217 NC_009832.1 3544414 3544971 D regulates genes involved in putrescine degradation; DNA-binding transcriptional repressor PuuR 3544414..3544971 Serratia proteamaculans 568 5606240 YP_001479444.1 CDS Spro_3218 NC_009832.1 3545179 3546690 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: yen:YE2762 putative ABC transport system ATP-binding protein; ABC transporter-like protein 3545179..3546690 Serratia proteamaculans 568 5606241 YP_001479445.1 CDS Spro_3219 NC_009832.1 3546687 3547682 D PFAM: inner-membrane translocator; KEGG: yen:YE2763 ribose transport system, permease protein; monosaccharide-transporting ATPase 3546687..3547682 Serratia proteamaculans 568 5606242 YP_001479446.1 CDS Spro_3220 NC_009832.1 3547944 3549941 D YiuR; outer membrane siderophore receptor; putative outer membrane receptor 3547944..3549941 Serratia proteamaculans 568 5606258 YP_001479447.1 CDS Spro_3221 NC_009832.1 3550123 3550911 R PFAM: SMC domain protein; ABC transporter related; SMART: AAA ATPase; KEGG: yen:YE1460 putative siderophore ABC transporter, ATP-binding subunit; ABC transporter-like protein complement(3550123..3550911) Serratia proteamaculans 568 5606259 YP_001479448.1 CDS Spro_3222 NC_009832.1 3550908 3551990 R PFAM: transport system permease protein; KEGG: ypi:YpsIP31758_2668 ABC transporter, iron chelate uptake transporter (FeCT) family, permease protein; transport system permease complement(3550908..3551990) Serratia proteamaculans 568 5606260 YP_001479449.1 CDS Spro_3223 NC_009832.1 3552349 3553446 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rpa:RPA3076 putative diguanylate cyclase (GGDEF); diguanylate cyclase 3552349..3553446 Serratia proteamaculans 568 5606264 YP_001479450.1 CDS Spro_3224 NC_009832.1 3553506 3554987 R PFAM: amino acid permease-associated region; KEGG: ypi:YpsIP31758_2670 lysine-specific permease LysP; lysine transporter complement(3553506..3554987) Serratia proteamaculans 568 5606265 YP_001479451.1 CDS Spro_3225 NC_009832.1 3555185 3556060 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: yen:YE1457 putative LysR-family transcriptional regulatory protein; putative DNA-binding transcriptional regulator complement(3555185..3556060) Serratia proteamaculans 568 5606266 YP_001479452.1 CDS Spro_3226 NC_009832.1 3556310 3557398 D PFAM: conserved hypothetical protein; KEGG: ypi:YpsIP31758_2674 hypothetical protein; hypothetical protein 3556310..3557398 Serratia proteamaculans 568 5606283 YP_001479453.1 CDS Spro_3227 NC_009832.1 3557516 3558355 D Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues; endonuclease IV 3557516..3558355 Serratia proteamaculans 568 5606284 YP_001479454.1 CDS Spro_3228 NC_009832.1 3558602 3560287 R phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system fructose-specific transporter subunits IIBC complement(3558602..3560287) Serratia proteamaculans 568 5606285 YP_001479455.1 CDS fruK NC_009832.1 3560299 3561240 R converts fructose-1-phosphate and ATP to fructose-1,6-bisphosphate and ADP; highly specific for fructose-1-phopshate; similar to PfkB; forms homodimers; 1-phosphofructokinase complement(3560299..3561240) Serratia proteamaculans 568 5606316 YP_001479456.1 CDS Spro_3230 NC_009832.1 3561237 3562370 R phosphoenolpyruvate (PEP)-dependent, sugar transporting phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIA is phosphorylated by phospho-HP which then transfers the phosphoryl group to the IIB componentr; bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein complement(3561237..3562370) Serratia proteamaculans 568 5606317 YP_001479457.1 CDS Spro_3231 NC_009832.1 3562618 3563040 D PFAM: NUDIX hydrolase; KEGG: yen:YE1446 putative Mut family protein; NUDIX hydrolase 3562618..3563040 Serratia proteamaculans 568 5606318 YP_001479458.1 CDS Spro_3232 NC_009832.1 3563298 3564458 D PFAM: NapC/NirT cytochrome c domain protein; KEGG: yen:YE1445 cytochrome c-type protein; NapC/NirT cytochrome c domain-containing protein 3563298..3564458 Serratia proteamaculans 568 5606355 YP_001479459.1 CDS Spro_3233 NC_009832.1 3564471 3566951 D KEGG: yen:YE1444 putative molybdopterin-containing oxidoreductase; TIGRFAM: molybdopterin guanine dinucleotide-containing S/N-oxide reductase; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin guanine dinucleotide-containing S/N-oxide reductase 3564471..3566951 Serratia proteamaculans 568 5606356 YP_001479460.1 CDS Spro_3234 NC_009832.1 3567077 3568306 D TIGRFAM: sugar efflux transporter; PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA2730 sugar efflux transporter; sugar efflux transporter 3567077..3568306 Serratia proteamaculans 568 5606357 YP_001479461.1 CDS Spro_3235 NC_009832.1 3568314 3568568 R PFAM: protein of unknown function UPF0153; KEGG: ypi:YpsIP31758_2696 hypothetical protein; hypothetical protein complement(3568314..3568568) Serratia proteamaculans 568 5606360 YP_001479462.1 CDS Spro_3236 NC_009832.1 3568852 3570096 D TIGRFAM: aromatic amino acid transporter; PFAM: aromatic amino acid permease; KEGG: yen:YE1442 putative tryptophan-specific transport protein; aromatic amino acid transporter 3568852..3570096 Serratia proteamaculans 568 5606361 YP_001479463.1 CDS Spro_3237 NC_009832.1 3570225 3570797 D TIGRFAM: elongation factor P-like protein YeiP; PFAM: Elongation factor P/YeiP protein; Elongation factor KOW domain protein; Elongation factor P; KEGG: ypi:YpsIP31758_2698 elongation factor P-like protein; elongation factor P-like protein YeiP 3570225..3570797 Serratia proteamaculans 568 5606362 YP_001479464.1 CDS Spro_3238 NC_009832.1 3570978 3572168 R catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate; mannonate dehydratase complement(3570978..3572168) Serratia proteamaculans 568 5606369 YP_001479465.1 CDS Spro_3239 NC_009832.1 3572506 3573987 D PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: yen:YE1438 putative D-mannonate oxidoreductase; mannitol dehydrogenase domain-containing protein 3572506..3573987 Serratia proteamaculans 568 5606370 YP_001479466.1 CDS Spro_3240 NC_009832.1 3574066 3574338 R KEGG: yen:YE1436 hypothetical protein; hypothetical protein complement(3574066..3574338) Serratia proteamaculans 568 5606371 YP_001479467.1 CDS Spro_3241 NC_009832.1 3574691 3575665 D PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: ypp:YPDSF_2417 cobalamin synthesis protein; cobalamin synthesis protein P47K 3574691..3575665 Serratia proteamaculans 568 5606409 YP_001479468.1 CDS Spro_3242 NC_009832.1 3575717 3576421 D PFAM: phosphoesterase PA-phosphatase related; KEGG: yen:YE1434 hypothetical protein; PA-phosphatase-like phosphoesterase 3575717..3576421 Serratia proteamaculans 568 5606410 YP_001479469.1 CDS Spro_3243 NC_009832.1 3576586 3576834 R hypothetical protein complement(3576586..3576834) Serratia proteamaculans 568 5606411 YP_001479470.1 CDS spr NC_009832.1 3576834 3577409 D by similarity, Spr seems to have peptidase activity; involved in thermoresistance; putative outer membrane lipoprotein 3576834..3577409 Serratia proteamaculans 568 5606517 YP_001479471.1 CDS Spro_3245 NC_009832.1 3577758 3579344 D PFAM: EAL domain protein; KEGG: ypi:YpsIP31758_2710 protein rtn; hypothetical protein 3577758..3579344 Serratia proteamaculans 568 5606518 YP_001479472.1 CDS Spro_3246 NC_009832.1 3579434 3581242 D PFAM: extracellular solute-binding protein family 5; KEGG: yen:YE1430 putative substrate-binding transport protein; extracellular solute-binding protein 3579434..3581242 Serratia proteamaculans 568 5606519 YP_001479473.1 CDS Spro_3247 NC_009832.1 3581253 3582347 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yen:YE1429 putative ABC transporter integral membrane subunit; binding-protein-dependent transport systems inner membrane component 3581253..3582347 Serratia proteamaculans 568 5606572 YP_001479474.1 CDS Spro_3248 NC_009832.1 3582344 3583369 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypi:YpsIP31758_2713 ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 3582344..3583369 Serratia proteamaculans 568 5606573 YP_001479475.1 CDS Spro_3249 NC_009832.1 3583371 3584963 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ypi:YpsIP31758_2714 ABC transporter, ATP-binding protein; ABC transporter-like protein 3583371..3584963 Serratia proteamaculans 568 5606588 YP_001479476.1 CDS Spro_3250 NC_009832.1 3584973 3585317 R KEGG: eca:ECA2740 hypothetical protein; hypothetical protein complement(3584973..3585317) Serratia proteamaculans 568 5606589 YP_001479477.1 CDS Spro_3251 NC_009832.1 3585925 3587133 R Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance; bicyclomycin/multidrug efflux system complement(3585925..3587133) Serratia proteamaculans 568 5606590 YP_001479478.1 CDS Spro_3252 NC_009832.1 3587173 3587886 R catalyzes the synthesis pseudouridine from uracil-516 in 16S ribosomal RNA; 16S rRNA pseudouridylate synthase A complement(3587173..3587886) Serratia proteamaculans 568 5606717 YP_001479479.1 CDS Spro_3253 NC_009832.1 3588196 3589953 D PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: yen:YE1423 putative DEAD box helicase family protein; type III restriction protein res subunit 3588196..3589953 Serratia proteamaculans 568 5606718 YP_001479480.1 CDS Spro_3254 NC_009832.1 3590160 3590444 D the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25 3590160..3590444 Serratia proteamaculans 568 5606719 YP_001479481.1 CDS Spro_3255 NC_009832.1 3590529 3591539 R PFAM: 37kDa nucleoid-associated protein; KEGG: eca:ECA2747 nucleoid-associated protein; nucleoid-associated protein NdpA complement(3590529..3591539) Serratia proteamaculans 568 5606752 YP_001479482.1 CDS Spro_3256 NC_009832.1 3591800 3592060 D PFAM: protein of unknown function DUF1414; KEGG: ypm:YP_0880 hypothetical protein; hypothetical protein 3591800..3592060 Serratia proteamaculans 568 5606753 YP_001479483.1 CDS Spro_3257 NC_009832.1 3592070 3593851 D PFAM: sulfatase; KEGG: yen:YE1419 hypothetical protein; sulfatase 3592070..3593851 Serratia proteamaculans 568 5606754 YP_001479484.1 CDS Spro_3258 NC_009832.1 3594991 3595320 R osmotically-inducible lipoprotein E; activator of ntr-like gene protein; DNA-binding transcriptional activator OsmE complement(3594991..3595320) Serratia proteamaculans 568 5603664 YP_001479485.1 CDS Spro_3259 NC_009832.1 3595455 3596351 R PFAM: beta-lactamase domain protein; KEGG: sec:SC3660 putative Zn-dependent hydrolase, including glyoxylases; beta-lactamase complement(3595455..3596351) Serratia proteamaculans 568 5606784 YP_001479486.1 CDS Spro_3260 NC_009832.1 3596431 3597333 D PFAM: regulatory protein LysR; KEGG: stm:STM3736 putative transcriptional regulator; LysR family transcriptional regulator 3596431..3597333 Serratia proteamaculans 568 5606785 YP_001479487.1 CDS Spro_3261 NC_009832.1 3597340 3597807 R PFAM: protein of unknown function DUF1348; KEGG: ypi:YpsIP31758_2759 hypothetical protein; hypothetical protein complement(3597340..3597807) Serratia proteamaculans 568 5606836 YP_001479488.1 CDS Spro_3262 NC_009832.1 3597923 3598501 D PFAM: regulatory protein TetR; KEGG: ypi:YpsIP31758_2760 transcriptional regulator, TetR family; TetR family transcriptional regulator 3597923..3598501 Serratia proteamaculans 568 5606837 YP_001479489.1 CDS Spro_3263 NC_009832.1 3598495 3598911 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rpa:RPA2469 putative lactoylglutathione lyase; glyoxalase/bleomycin resistance protein/dioxygenase complement(3598495..3598911) Serratia proteamaculans 568 5606838 YP_001479490.1 CDS Spro_3264 NC_009832.1 3599191 3600303 R allows for ions and hydrophilic solutes to cross the outer membrane; outer membrane porin protein C complement(3599191..3600303) Serratia proteamaculans 568 5606846 YP_001479491.1 CDS Spro_3265 NC_009832.1 3601135 3602289 D PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE1399 hypothetical protein; major facilitator transporter 3601135..3602289 Serratia proteamaculans 568 5606847 YP_001479492.1 CDS Spro_3266 NC_009832.1 3602311 3605013 D PFAM: ATP-binding region ATPase domain protein; Hpt domain protein; KEGG: yen:YE1398 putative two component sensor kinase; phosphotransfer intermediate protein in two-component regulatory system with RcsBC 3602311..3605013 Serratia proteamaculans 568 5606848 YP_001479493.1 CDS Spro_3267 NC_009832.1 3605006 3605656 D two-component response regulator RscB regulates the genes involved in capsule biosynthesis and cell division; probably phosphorylated by RcsC or RcsF; transcriptional regulator RcsB 3605006..3605656 Serratia proteamaculans 568 5606855 YP_001479494.1 CDS Spro_3268 NC_009832.1 3605708 3608581 R PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: yps:YPTB1257 two component sensor kinase/response regulator protein RcsC; hybrid sensory kinase in two-component regulatory system with RcsB and YojN complement(3605708..3608581) Serratia proteamaculans 568 5606856 YP_001479495.1 CDS Spro_3269 NC_009832.1 3608745 3611393 R negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A complement(3608745..3611393) Serratia proteamaculans 568 5606857 YP_001479496.1 CDS Spro_3270 NC_009832.1 3611606 3612331 D Involved in ubiquinone biosynthesis; 3-demethylubiquinone-9 3-methyltransferase 3611606..3612331 Serratia proteamaculans 568 5606908 YP_001479497.1 CDS Spro_3271 NC_009832.1 3612769 3615057 D Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 3612769..3615057 Serratia proteamaculans 568 5606909 YP_001479498.1 CDS nrdB NC_009832.1 3615128 3616258 D B2 or R2 protein; type 1a enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdA; ribonucleotide-diphosphate reductase subunit beta 3615128..3616258 Serratia proteamaculans 568 5606910 YP_001479499.1 CDS Spro_3273 NC_009832.1 3616262 3616522 D plays a role in maintenance and possibly the biosynthesis of diferric-tyrosyl radical cofactor, essential for nucleotide reduction catalyzed by ribonucleotide reductases; 2Fe-2S ferredoxin YfaE 3616262..3616522 Serratia proteamaculans 568 5606934 YP_001479500.1 CDS Spro_3274 NC_009832.1 3616583 3616735 R PFAM: Hok/gef cell toxic protein; KEGG: kpn:KPN_03921 putative hok/gef cell toxic protein; Hok/gef cell toxic protein complement(3616583..3616735) Serratia proteamaculans 568 5606935 YP_001479501.1 CDS Spro_3275 NC_009832.1 3616963 3618159 R TIGRFAM: molybdenum cofactor synthesis domain; competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; KEGG: yen:YE1383 hypothetical protein; competence damage-inducible protein A complement(3616963..3618159) Serratia proteamaculans 568 5606936 YP_001479502.1 CDS Spro_3276 NC_009832.1 3618404 3619612 D TIGRFAM: aromatic amino acid transporter; PFAM: aromatic amino acid permease; Amino acid transporter transmembrane; KEGG: ypi:YpsIP31758_2774 tyrosine-specific transport protein; aromatic amino acid transporter 3618404..3619612 Serratia proteamaculans 568 5607041 YP_001479503.1 CDS Spro_3277 NC_009832.1 3619663 3620205 R PFAM: YfaZ family protein; KEGG: ypi:YpsIP31758_2775 putative outer membrane protein; YfaZ family protein complement(3619663..3620205) Serratia proteamaculans 568 5607042 YP_001479504.1 CDS Spro_3278 NC_009832.1 3620533 3621969 D PFAM: Catalase domain protein; KEGG: yen:YE1380 catalase; catalase 3620533..3621969 Serratia proteamaculans 568 5607043 YP_001479505.1 CDS Spro_3279 NC_009832.1 3622008 3623393 R TIGRFAM: O-succinylbenzoate-CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: yps:YPTB2556 O-succinylbenzoic acid--CoA ligase; O-succinylbenzoic acid--CoA ligase complement(3622008..3623393) Serratia proteamaculans 568 5607071 YP_001479506.1 CDS Spro_3280 NC_009832.1 3623381 3624364 R catalyzes the dehydration of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate; O-succinylbenzoate synthase complement(3623381..3624364) Serratia proteamaculans 568 5607072 YP_001479507.1 CDS Spro_3281 NC_009832.1 3624364 3625221 R catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA; naphthoate synthase complement(3624364..3625221) Serratia proteamaculans 568 5607073 YP_001479508.1 CDS Spro_3282 NC_009832.1 3625233 3626000 R catalyzes the hydrolysis of the thioester bond in palmitoyl-CoA; acyl-CoA thioester hydrolase YfbB complement(3625233..3626000) Serratia proteamaculans 568 5607102 YP_001479509.1 CDS Spro_3283 NC_009832.1 3626000 3627673 R SEPHCHC synthase; forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1- carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis; 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase complement(3626000..3627673) Serratia proteamaculans 568 5607103 YP_001479510.1 CDS Spro_3284 NC_009832.1 3627926 3629224 R TIGRFAM: isochorismate synthase; PFAM: Chorismate binding-like; KEGG: yps:YPTB2561 menaquinone-specific isochorismate synthase; isochorismate synthase complement(3627926..3629224) Serratia proteamaculans 568 5607104 YP_001479511.1 CDS Spro_3285 NC_009832.1 3629505 3638147 D PFAM: putative carbohydrate binding; glycosyltransferase 36; glycosyltransferase 36 associated; KEGG: ent:Ent638_4245 glycosyltransferase 36; glycosyltransferase 36 3629505..3638147 Serratia proteamaculans 568 5607186 YP_001479512.1 CDS Spro_3286 NC_009832.1 3638190 3638501 R PFAM: protein of unknown function DUF883 ElaB; KEGG: sfv:SFV_2337 hypothetical protein; hypothetical protein complement(3638190..3638501) Serratia proteamaculans 568 5607187 YP_001479513.1 CDS Spro_3287 NC_009832.1 3638587 3639621 R NAD-binding; L-idonate 5-dehydrogenase complement(3638587..3639621) Serratia proteamaculans 568 5607188 YP_001479514.1 CDS Spro_3288 NC_009832.1 3639642 3640406 R Involved in the nonphosphorylative, ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate; gluconate 5-dehydrogenase complement(3639642..3640406) Serratia proteamaculans 568 5607201 YP_001479515.1 CDS Spro_3289 NC_009832.1 3640677 3641660 D PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: yen:YE1364 putative LacI-family transcriptional regulatory protein; LacI family transcription regulator 3640677..3641660 Serratia proteamaculans 568 5607202 YP_001479516.1 CDS Spro_3290 NC_009832.1 3641662 3642156 R PFAM: protein of unknown function DUF1097; KEGG: yen:YE1358 hypothetical protein; hypothetical protein complement(3641662..3642156) Serratia proteamaculans 568 5607203 YP_001479517.1 CDS Spro_3291 NC_009832.1 3642417 3643661 R PFAM: major facilitator superfamily MFS_1; KEGG: asa:ASA_3608 multi-drug efflux transporter; major facilitator transporter complement(3642417..3643661) Serratia proteamaculans 568 5607292 YP_001479518.1 CDS Spro_3292 NC_009832.1 3643810 3644673 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: reu:Reut_A0878 probable transmembrane protein; hypothetical protein complement(3643810..3644673) Serratia proteamaculans 568 5607293 YP_001479519.1 CDS Spro_3293 NC_009832.1 3644774 3645199 R PFAM: Cupin 2 conserved barrel domain protein; KEGG: psp:PSPPH_4848 hypothetical protein; cupin 2 domain-containing protein complement(3644774..3645199) Serratia proteamaculans 568 5607294 YP_001479520.1 CDS Spro_3294 NC_009832.1 3645290 3647119 R PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: stp:Strop_3951 thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate binding domain-containing protein complement(3645290..3647119) Serratia proteamaculans 568 5607322 YP_001479521.1 CDS Spro_3295 NC_009832.1 3647456 3648331 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aha:AHA_0743 regulatory protein, LysR:LysR, substrate-binding; LysR family transcriptional regulator 3647456..3648331 Serratia proteamaculans 568 5607323 YP_001479522.1 CDS Spro_3296 NC_009832.1 3648411 3649868 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit N complement(3648411..3649868) Serratia proteamaculans 568 5607324 YP_001479523.1 CDS Spro_3297 NC_009832.1 3649875 3651404 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit M complement(3649875..3651404) Serratia proteamaculans 568 5607404 YP_001479524.1 CDS Spro_3298 NC_009832.1 3651505 3653352 R Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L complement(3651505..3653352) Serratia proteamaculans 568 5607405 YP_001479525.1 CDS Spro_3299 NC_009832.1 3653349 3653651 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit K complement(3653349..3653651) Serratia proteamaculans 568 5607406 YP_001479526.1 CDS Spro_3300 NC_009832.1 3653648 3654208 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit J complement(3653648..3654208) Serratia proteamaculans 568 5603379 YP_001479527.1 CDS Spro_3301 NC_009832.1 3654222 3654764 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I complement(3654222..3654764) Serratia proteamaculans 568 5603380 YP_001479528.1 CDS Spro_3302 NC_009832.1 3654779 3655756 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H complement(3654779..3655756) Serratia proteamaculans 568 5603381 YP_001479529.1 CDS Spro_3303 NC_009832.1 3655753 3658500 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit G complement(3655753..3658500) Serratia proteamaculans 568 5603343 YP_001479530.1 CDS Spro_3304 NC_009832.1 3658571 3659923 R shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase; NADH dehydrogenase I subunit F complement(3658571..3659923) Serratia proteamaculans 568 5603344 YP_001479531.1 CDS Spro_3305 NC_009832.1 3659920 3660471 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit E complement(3659920..3660471) Serratia proteamaculans 568 5603345 YP_001479532.1 CDS Spro_3306 NC_009832.1 3660474 3662270 R NuoCD; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; subunits NuoCD, E, F, and G constitute the peripheral sector of the complex; in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms; bifunctional NADH:ubiquinone oxidoreductase subunit C/D complement(3660474..3662270) Serratia proteamaculans 568 5603331 YP_001479533.1 CDS Spro_3307 NC_009832.1 3662366 3663040 R The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B complement(3662366..3663040) Serratia proteamaculans 568 5603332 YP_001479534.1 CDS Spro_3308 NC_009832.1 3663064 3663504 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit A complement(3663064..3663504) Serratia proteamaculans 568 5603333 YP_001479535.1 CDS Spro_3309 NC_009832.1 3664217 3665152 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: yps:YPTB2588 LysR-family transcriptional regulatory protein; LysR family transcriptional regulator complement(3664217..3665152) Serratia proteamaculans 568 5603293 YP_001479536.1 CDS Spro_3310 NC_009832.1 3666016 3667230 D broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; aminotransferase AlaT 3666016..3667230 Serratia proteamaculans 568 5603294 YP_001479537.1 CDS Spro_3311 NC_009832.1 3667321 3667956 D KEGG: yen:YE1340 hypothetical protein; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; hypothetical protein 3667321..3667956 Serratia proteamaculans 568 5603295 YP_001479538.1 CDS Spro_3312 NC_009832.1 3667987 3669819 R PFAM: Citrate transporter; TrkA-C domain protein; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: yps:YPTB2592 probable sodium:sulfate symporter; citrate transporter complement(3667987..3669819) Serratia proteamaculans 568 5603237 YP_001479539.1 CDS Spro_3313 NC_009832.1 3669918 3670574 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: yen:YE1337 putative haloacid dehalogenase-like hydrolase; putative phosphatase complement(3669918..3670574) Serratia proteamaculans 568 5603238 YP_001479540.1 CDS Spro_3314 NC_009832.1 3670591 3671088 R PFAM: YfbU family protein; KEGG: yen:YE1336 hypothetical protein; hypothetical protein complement(3670591..3671088) Serratia proteamaculans 568 5603239 YP_001479541.1 CDS Spro_3315 NC_009832.1 3671233 3671688 R PFAM: protein of unknown function DUF412; KEGG: yen:YE1335 hypothetical protein; hypothetical protein complement(3671233..3671688) Serratia proteamaculans 568 5603181 YP_001479542.1 CDS Spro_3316 NC_009832.1 3672043 3673245 D AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase 3672043..3673245 Serratia proteamaculans 568 5603182 YP_001479543.1 CDS Spro_3317 NC_009832.1 3673293 3675482 D catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate; phosphate acetyltransferase 3673293..3675482 Serratia proteamaculans 568 5603183 YP_001479544.1 CDS Spro_3318 NC_009832.1 3675550 3676107 R PFAM: NUDIX hydrolase; KEGG: eca:ECA3042 putative NUDIX hydrolase; NUDIX hydrolase complement(3675550..3676107) Serratia proteamaculans 568 5603599 YP_001479545.1 CDS Spro_3319 NC_009832.1 3676198 3676749 R TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; KEGG: ypi:YpsIP31758_1434 phosphodiesterase, MJ0936 family; phosphodiesterase complement(3676198..3676749) Serratia proteamaculans 568 5603600 YP_001479546.1 CDS Spro_3320 NC_009832.1 3676998 3677627 D PFAM: Glutathione S-transferase domain; KEGG: eca:ECA3044 putative glutathione-S transferase; glutathione S-transferase domain-containing protein 3676998..3677627 Serratia proteamaculans 568 5603601 YP_001479547.1 CDS folX NC_009832.1 3677732 3678103 D catalyzes the formation of dihydromonapterin triphosphate from dihydroneopterin triphosphate; D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase 3677732..3678103 Serratia proteamaculans 568 5603626 YP_001479548.1 CDS Spro_3322 NC_009832.1 3678131 3679045 D PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; domain of unknown function DUF1731; KEGG: ypi:YpsIP31758_1432 NAD dependent epimerase/dehydratase family protein; hypothetical protein 3678131..3679045 Serratia proteamaculans 568 5603627 YP_001479549.1 CDS Spro_3323 NC_009832.1 3679087 3679860 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: yen:YE1321 histidine transport ATP-binding protein HisP; histidine/lysine/arginine/ornithine transporter subunit complement(3679087..3679860) Serratia proteamaculans 568 5603628 YP_001479550.1 CDS Spro_3324 NC_009832.1 3679879 3680583 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yen:YE1320 histidine transport system permease protein HisM; polar amino acid ABC transporter inner membrane subunit complement(3679879..3680583) Serratia proteamaculans 568 5604537 YP_001479551.1 CDS Spro_3325 NC_009832.1 3680580 3681266 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypi:YpsIP31758_1429 histidine ABC transporter, permease protein HisQ; polar amino acid ABC transporter inner membrane subunit complement(3680580..3681266) Serratia proteamaculans 568 5604538 YP_001479552.1 CDS Spro_3326 NC_009832.1 3681352 3682134 R TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: yen:YE1318 histidine-binding periplasmic protein; cationic amino acid ABC transporter periplasmic binding protein complement(3681352..3682134) Serratia proteamaculans 568 5604539 YP_001479553.1 CDS Spro_3327 NC_009832.1 3682436 3683008 R catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase complement(3682436..3683008) Serratia proteamaculans 568 5602485 YP_001479554.1 CDS Spro_3328 NC_009832.1 3683139 3684656 R Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase complement(3683139..3684656) Serratia proteamaculans 568 5602486 YP_001479555.1 CDS Spro_3329 NC_009832.1 3684678 3685178 R membrane protein required for colicin V production; colicin V production protein complement(3684678..3685178) Serratia proteamaculans 568 5602487 YP_001479556.1 CDS Spro_3330 NC_009832.1 3685411 3686160 R PFAM: Sporulation domain protein; KEGG: yen:YE1313 hypothetical protein; hypothetical protein complement(3685411..3686160) Serratia proteamaculans 568 5602508 YP_001479557.1 CDS Spro_3331 NC_009832.1 3686161 3687423 R TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: yen:YE1312 putative FolC bifunctional protein; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase complement(3686161..3687423) Serratia proteamaculans 568 5602509 YP_001479558.1 CDS Spro_3332 NC_009832.1 3687576 3688484 R catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta complement(3687576..3688484) Serratia proteamaculans 568 5602510 YP_001479559.1 CDS Spro_3333 NC_009832.1 3688715 3689377 R PFAM: SNARE associated Golgi protein; KEGG: kpn:KPN_02707 putative integral membrane protein; hypothetical protein complement(3688715..3689377) Serratia proteamaculans 568 5602537 YP_001479560.1 CDS Spro_3334 NC_009832.1 3689453 3690274 R KEGG: eca:ECA3058 tRNA pseudouridine synthase A; TIGRFAM: tRNA pseudouridine synthase A; PFAM: tRNA pseudouridine synthase; tRNA pseudouridine synthase A complement(3689453..3690274) Serratia proteamaculans 568 5602538 YP_001479561.1 CDS Spro_3335 NC_009832.1 3690274 3691284 R PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region; KEGG: ypi:YpsIP31758_1419 aspartate-semialdehyde dehydrogenase family protein; putative semialdehyde dehydrogenase complement(3690274..3691284) Serratia proteamaculans 568 5602539 YP_001479562.1 CDS Spro_3336 NC_009832.1 3691375 3692496 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: yps:YPTB2620 putative D-isomer specific 2-hydroxyacid dehydrogenase; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase complement(3691375..3692496) Serratia proteamaculans 568 5602543 YP_001479563.1 CDS Spro_3337 NC_009832.1 3692550 3693323 R PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: yen:YE1306 putative AraC-family regulatory protein; AraC family transcriptional regulator complement(3692550..3693323) Serratia proteamaculans 568 5602544 YP_001479564.1 CDS Spro_3338 NC_009832.1 3693426 3694355 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: yen:YE1305 hypothetical protein; hypothetical protein 3693426..3694355 Serratia proteamaculans 568 5602545 YP_001479565.1 CDS Spro_3339 NC_009832.1 3695392 3696810 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Two-component sensor kinase domain protein; KEGG: plu:plu3178 two-component sensor kinase; integral membrane sensor signal transduction histidine kinase complement(3695392..3696810) Serratia proteamaculans 568 5602606 YP_001479566.1 CDS Spro_3340 NC_009832.1 3696797 3697471 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: plu:plu3179 two-component response regulator; two component transcriptional regulator complement(3696797..3697471) Serratia proteamaculans 568 5602607 YP_001479567.1 CDS Spro_3341 NC_009832.1 3697688 3698008 R hypothetical protein complement(3697688..3698008) Serratia proteamaculans 568 5602608 YP_001479568.1 CDS Spro_3342 NC_009832.1 3698308 3699288 D PFAM: conserved hypothetical protein; KEGG: plu:plu3181 putative tricarboxylic transport membrane protein; hypothetical protein 3698308..3699288 Serratia proteamaculans 568 5602623 YP_001479569.1 CDS Spro_3343 NC_009832.1 3699301 3699732 D KEGG: stm:STM2787 tricarboxylic transport; tricarboxylic transport 3699301..3699732 Serratia proteamaculans 568 5602624 YP_001479570.1 CDS Spro_3344 NC_009832.1 3699744 3701261 D PFAM: protein of unknown function DUF112 transmembrane; KEGG: plu:plu3183 TctA protein; hypothetical protein 3699744..3701261 Serratia proteamaculans 568 5602625 YP_001479571.1 CDS Spro_3345 NC_009832.1 3701295 3701924 R PFAM: transferase hexapeptide repeat containing protein; KEGG: vco:VC0395_0977 antibiotic acetyltransferase; hexapaptide repeat-containing transferase complement(3701295..3701924) Serratia proteamaculans 568 5602640 YP_001479572.1 CDS Spro_3346 NC_009832.1 3702080 3703075 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: yen:YE1304 putative inner membrane protein; hypothetical protein complement(3702080..3703075) Serratia proteamaculans 568 5602641 YP_001479573.1 CDS Spro_3347 NC_009832.1 3703202 3704704 D PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: yen:YE1303 hypothetical protein; transcriptional regulator 3703202..3704704 Serratia proteamaculans 568 5602642 YP_001479574.1 CDS Spro_3348 NC_009832.1 3704713 3705213 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; Thioredoxin domain; KEGG: yen:YE1302 putative metal resistance protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen complement(3704713..3705213) Serratia proteamaculans 568 5602668 YP_001479575.1 CDS Spro_3349 NC_009832.1 3705206 3705922 R PFAM: DSBA oxidoreductase; KEGG: yen:YE1301 putative metal resistance protein; DSBA oxidoreductase complement(3705206..3705922) Serratia proteamaculans 568 5602669 YP_001479576.1 CDS Spro_3350 NC_009832.1 3705919 3707955 R PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: yen:YE1300 putative metal resistance protein; cytochrome C biogenesis transmembrane protein complement(3705919..3707955) Serratia proteamaculans 568 5602670 YP_001479577.1 CDS Spro_3351 NC_009832.1 3708005 3708370 R KEGG: yen:YE1299 putative metal resistance protein; putative metal resistance protein complement(3708005..3708370) Serratia proteamaculans 568 5602671 YP_001479578.1 CDS flk NC_009832.1 3708549 3709577 D in Salmonella typhimurium Flk regulates flagellar biosynthesis by inhibition of the flagellar-associated type III secretion system; lowers secretion levels of the anti-sigma28 factor FlgM to the periplasm; inner membrane-anchored protein; flagella biosynthesis regulator 3708549..3709577 Serratia proteamaculans 568 5602672 YP_001479579.1 CDS Spro_3353 NC_009832.1 3709623 3710888 R PFAM: major facilitator superfamily MFS_1; KEGG: ace:Acel_1471 major facilitator superfamily MFS_1; major facilitator transporter complement(3709623..3710888) Serratia proteamaculans 568 5602673 YP_001479580.1 CDS Spro_3354 NC_009832.1 3710925 3711488 R PFAM: GCN5-related N-acetyltransferase; KEGG: bvi:Bcep1808_5016 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase complement(3710925..3711488) Serratia proteamaculans 568 5602675 YP_001479581.1 CDS Spro_3355 NC_009832.1 3711485 3713455 R PFAM: Carbamoyltransferase; KEGG: yen:YE0544 putative transferase; carbamoyltransferase complement(3711485..3713455) Serratia proteamaculans 568 5602676 YP_001479582.1 CDS Spro_3356 NC_009832.1 3713485 3714201 R KEGG: bvi:Bcep1808_5012 hypothetical protein; hypothetical protein complement(3713485..3714201) Serratia proteamaculans 568 5602677 YP_001479583.1 CDS Spro_3357 NC_009832.1 3714226 3714933 R KEGG: bvi:Bcep1808_5012 hypothetical protein; hypothetical protein complement(3714226..3714933) Serratia proteamaculans 568 5602713 YP_001479584.1 CDS Spro_3358 NC_009832.1 3715811 3716707 R PFAM: Endonuclease/exonuclease/phosphatase; KEGG: rba:RB4127 probable secreted protein; endonuclease/exonuclease/phosphatase complement(3715811..3716707) Serratia proteamaculans 568 5602714 YP_001479585.1 CDS Spro_3359 NC_009832.1 3716922 3718154 D catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T 3716922..3718154 Serratia proteamaculans 568 5602715 YP_001479586.1 CDS Spro_3360 NC_009832.1 3718200 3719312 R PFAM: Citrate transporter; KEGG: yen:YE1297 putative inner membrane protein; citrate transporter complement(3718200..3719312) Serratia proteamaculans 568 5602716 YP_001479587.1 CDS Spro_3361 NC_009832.1 3719469 3720500 D catalyzes the conversion of aminoimidazole ribotide to the 4-amino-5-hydroxymethyl-2-methyl pyrimidine moiety of thiamine; involved in the maintenance and/or assembly of sulfur clusters; periplasmic lipoporotein anchored to the inner membrane; part of the thiamine pyrophosphate biosynthesis pathway; thiamine biosynthesis lipoprotein ApbE 3719469..3720500 Serratia proteamaculans 568 5602717 YP_001479588.1 CDS Spro_3362 NC_009832.1 3720707 3723826 R TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: yen:YE3630 putative cation efflux system protein; CzcA family heavy metal efflux protein complement(3720707..3723826) Serratia proteamaculans 568 5602718 YP_001479589.1 CDS Spro_3363 NC_009832.1 3723823 3725274 R TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: yen:YE3629 putative efflux system protein; RND family efflux transporter MFP subunit complement(3723823..3725274) Serratia proteamaculans 568 5602753 YP_001479590.1 CDS Spro_3364 NC_009832.1 3725271 3726530 R PFAM: outer membrane efflux protein; KEGG: yen:YE3628 outer membrane efflux protein; outer membrane efflux protein complement(3725271..3726530) Serratia proteamaculans 568 5602754 YP_001479591.1 CDS Spro_3365 NC_009832.1 3726541 3726864 R KEGG: yen:YE3627 hypothetical protein; hypothetical protein complement(3726541..3726864) Serratia proteamaculans 568 5602755 YP_001479592.1 CDS Spro_3366 NC_009832.1 3726933 3727355 R KEGG: eca:ECA1387 hypothetical protein; hypothetical protein complement(3726933..3727355) Serratia proteamaculans 568 5602935 YP_001479593.1 CDS Spro_3367 NC_009832.1 3727560 3727781 R KEGG: stm:STM3392 putative outer membrane lipoprotein; putative outer membrane lipoprotein complement(3727560..3727781) Serratia proteamaculans 568 5602936 YP_001479594.1 CDS Spro_3368 NC_009832.1 3727993 3729207 R FabB, beta-Ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase I complement(3727993..3729207) Serratia proteamaculans 568 5602937 YP_001479595.1 CDS mnmC NC_009832.1 3729378 3731399 D catalyzes the formation of 5-methylaminomethyl-2-thiouridine in position 34 of the anticodon of tRNA molecules; 5-methylaminomethyl-2-thiouridine methyltransferase 3729378..3731399 Serratia proteamaculans 568 5602982 YP_001479596.1 CDS Spro_3370 NC_009832.1 3731444 3731725 R PFAM: YfcL protein; KEGG: kpn:KPN_02715 hypothetical protein; YfcL protein complement(3731444..3731725) Serratia proteamaculans 568 5602983 YP_001479597.1 CDS Spro_3371 NC_009832.1 3731757 3732314 R PFAM: protein of unknown function DUF462; KEGG: yen:YE1284 hypothetical protein; hypothetical protein complement(3731757..3732314) Serratia proteamaculans 568 5602984 YP_001479598.1 CDS Spro_3372 NC_009832.1 3732379 3733179 R PFAM: protein of unknown function DUF81; KEGG: yen:YE1283 hypothetical protein; hypothetical protein complement(3732379..3733179) Serratia proteamaculans 568 5603046 YP_001479599.1 CDS mepA NC_009832.1 3733183 3734010 R D-alanyl-D-alanine endopeptidase; functions in hydrolyzing cell wall peptidoglycan; similar to LAS metallopeptidases; forms a dimer in periplasm; penicillin-insensitive murein endopeptidase complement(3733183..3734010) Serratia proteamaculans 568 5603047 YP_001479600.1 CDS Spro_3374 NC_009832.1 3734016 3735101 R catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase complement(3734016..3735101) Serratia proteamaculans 568 5603048 YP_001479601.1 CDS Spro_3375 NC_009832.1 3735164 3736138 R involved in methylation of ribosomal protein L3; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase complement(3735164..3736138) Serratia proteamaculans 568 5603126 YP_001479602.1 CDS Spro_3376 NC_009832.1 3736267 3736797 D PFAM: Smr protein/MutS2; KEGG: yen:YE1279 hypothetical protein; hypothetical protein 3736267..3736797 Serratia proteamaculans 568 5603127 YP_001479603.1 CDS Spro_3377 NC_009832.1 3736863 3737345 R TIGRFAM: phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase; KEGG: yen:YE1278 putative phosphohistidine phosphatase; phosphohistidine phosphatase complement(3736863..3737345) Serratia proteamaculans 568 5603128 YP_001479604.1 CDS fadJ NC_009832.1 3737751 3739916 R multifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities: forms a heterotetramer with FadI; similar to FadA2B2 complex; involved in the anaerobic degradation of long and medium-chain fatty acids in the presence of nitrate; multifunctional fatty acid oxidation complex subunit alpha complement(3737751..3739916) Serratia proteamaculans 568 5603340 YP_001479605.1 CDS fadI NC_009832.1 3739916 3741226 R FadI; fatty acid oxidation complex component beta; functions in a heterotetramer with FadJ; similar to FadA2B2 complex; functions in beta-oxidation of fatty acids during anaerobic growth; 3-ketoacyl-CoA thiolase complement(3739916..3741226) Serratia proteamaculans 568 5603341 YP_001479606.1 CDS Spro_3380 NC_009832.1 3741418 3741714 R PFAM: conserved hypothetical protein; KEGG: eca:ECA3080 hypothetical protein; hypothetical protein complement(3741418..3741714) Serratia proteamaculans 568 5603342 YP_001479607.1 CDS Spro_3381 NC_009832.1 3742120 3743442 D PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: kpn:KPN_02726 long-chain fatty acid transport protein (outer membrane flp protein); long-chain fatty acid outer membrane transporter 3742120..3743442 Serratia proteamaculans 568 5603373 YP_001479608.1 CDS Spro_3382 NC_009832.1 3743556 3744314 R PFAM: VacJ family lipoprotein; KEGG: ypi:YpsIP31758_1396 lipoprotein VacJ; VacJ family lipoprotein complement(3743556..3744314) Serratia proteamaculans 568 5603374 YP_001479609.1 CDS Spro_3383 NC_009832.1 3744350 3745561 R PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: yen:YE1271 VacJ lipoprotein; TPR repeat-containing protein complement(3744350..3745561) Serratia proteamaculans 568 5603375 YP_001479610.1 CDS Spro_3384 NC_009832.1 3745561 3746034 R PFAM: cytochrome C biogenesis protein; KEGG: ypp:YPDSF_2019 cytochrome c-type biogenesis protein; cytochrome C biogenesis protein complement(3745561..3746034) Serratia proteamaculans 568 5603406 YP_001479611.1 CDS Spro_3385 NC_009832.1 3746031 3746582 R TIGRFAM: periplasmic protein thiol--disulphide oxidoreductase DsbE; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: yen:YE1269 thiol:disulfide interchange protein DsbE; periplasmic protein thiol--disulfide oxidoreductase DsbE complement(3746031..3746582) Serratia proteamaculans 568 5603407 YP_001479612.1 CDS Spro_3386 NC_009832.1 3746579 3748549 R TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: yen:YE1268 putative cytochrome c-type biogenesis protein; cytochrome c-type biogenesis protein CcmF complement(3746579..3748549) Serratia proteamaculans 568 5603408 YP_001479613.1 CDS Spro_3387 NC_009832.1 3748546 3749040 R CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane; cytochrome c-type biogenesis protein CcmE complement(3748546..3749040) Serratia proteamaculans 568 5603547 YP_001479614.1 CDS Spro_3388 NC_009832.1 3749037 3749273 R PFAM: Heme exporter protein D (CcmD); KEGG: yen:YE1266 putative heme exporter protein D; heme exporter protein CcmD complement(3749037..3749273) Serratia proteamaculans 568 5603548 YP_001479615.1 CDS Spro_3389 NC_009832.1 3749270 3750007 R TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein; KEGG: yen:YE1265 putative heme exporter protein C; heme exporter protein CcmC complement(3749270..3750007) Serratia proteamaculans 568 5603549 YP_001479616.1 CDS Spro_3390 NC_009832.1 3750126 3750785 R TIGRFAM: heme exporter protein CcmB; PFAM: cytochrome c-type biogenesis protein CcmB; KEGG: ypi:YpsIP31758_1388 heme exporter protein CcmB; heme exporter protein CcmB complement(3750126..3750785) Serratia proteamaculans 568 5603561 YP_001479617.1 CDS Spro_3391 NC_009832.1 3750785 3751465 R ATP-binding protein; required for proper cytochrome c maturation; cytochrome c biogenesis protein CcmA complement(3750785..3751465) Serratia proteamaculans 568 5603562 YP_001479618.1 CDS Spro_3392 NC_009832.1 3751669 3752598 D KEGG: yen:YE1262 putative inner membrane protein; hypothetical protein 3751669..3752598 Serratia proteamaculans 568 5603563 YP_001479619.1 CDS Spro_3393 NC_009832.1 3752888 3753517 D KEGG: kpn:KPN_02277 putative nucleoprotein/polynucleotide-associated enzyme; putative nucleoprotein/polynucleotide-associated enzyme 3752888..3753517 Serratia proteamaculans 568 5603665 YP_001479620.1 CDS Spro_3394 NC_009832.1 3753702 3754631 D regulates the synthesis and expression of the dsdXA operon and dadA gene; DNA-binding transcriptional regulator DsdC 3753702..3754631 Serratia proteamaculans 568 5603703 YP_001479621.1 CDS Spro_3395 NC_009832.1 3754666 3754965 R hypothetical protein complement(3754666..3754965) Serratia proteamaculans 568 5603704 YP_001479622.1 CDS Spro_3396 NC_009832.1 3754969 3755892 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: gsu:GSU3388 hypothetical protein; hypothetical protein complement(3754969..3755892) Serratia proteamaculans 568 5603714 YP_001479623.1 CDS Spro_3397 NC_009832.1 3755983 3756258 R KEGG: stt:t4290 hypothetical protein; hypothetical protein complement(3755983..3756258) Serratia proteamaculans 568 5603715 YP_001479624.1 CDS Spro_3398 NC_009832.1 3756696 3757847 D KEGG: kpn:KPN_00475 putative outer membrane protein; putative outer membrane protein 3756696..3757847 Serratia proteamaculans 568 5603716 YP_001479625.1 CDS Spro_3399 NC_009832.1 3757904 3758989 R membrane-bound lytic murein transglycosylase B; catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine in peptidoglycan; murein hydrolase B complement(3757904..3758989) Serratia proteamaculans 568 5603784 YP_001479626.1 CDS Spro_3400 NC_009832.1 3759279 3759719 D KEGG: yen:YE1233 hypothetical protein; hypothetical protein 3759279..3759719 Serratia proteamaculans 568 5603785 YP_001479627.1 CDS Spro_3401 NC_009832.1 3760588 3761823 R PFAM: aminotransferase class I and II; KEGG: yen:YE1231 putative aminotransferase; aminotransferase complement(3760588..3761823) Serratia proteamaculans 568 5603786 YP_001479628.1 CDS Spro_3402 NC_009832.1 3761945 3762484 R PFAM: GCN5-related N-acetyltransferase; KEGG: yen:YE1230 putative acetyltransferase; GCN5-like N-acetyltransferase complement(3761945..3762484) Serratia proteamaculans 568 5603790 YP_001479629.1 CDS Spro_3403 NC_009832.1 3762673 3763920 D PFAM: protein of unknown function DUF1479; KEGG: yen:YE1229 hypothetical protein; hypothetical protein 3762673..3763920 Serratia proteamaculans 568 5603791 YP_001479630.1 CDS Spro_3404 NC_009832.1 3764030 3765721 D PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase internal region; 5TM Receptors of the LytS-YhcK type transmembrane region; KEGG: yen:YE1228 two-component system histidine kinase; signal transduction histidine kinase LytS 3764030..3765721 Serratia proteamaculans 568 5603792 YP_001479631.1 CDS Spro_3405 NC_009832.1 3765718 3766452 D PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: yen:YE1227 putative two-component system response-regulator; LytTR family two component transcriptional regulator 3765718..3766452 Serratia proteamaculans 568 5603956 YP_001479632.1 CDS Spro_3406 NC_009832.1 3766777 3768003 D PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE1226 putative membrane transport protein; major facilitator transporter 3766777..3768003 Serratia proteamaculans 568 5603957 YP_001479633.1 CDS glk NC_009832.1 3768067 3769029 R catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate; glucokinase complement(3768067..3769029) Serratia proteamaculans 568 5603958 YP_001479634.1 CDS Spro_3408 NC_009832.1 3769373 3770620 D PFAM: Chloride channel core; KEGG: ecc:c2928 hypothetical protein; hypothetical protein 3769373..3770620 Serratia proteamaculans 568 5604001 YP_001479635.1 CDS Spro_3409 NC_009832.1 3770617 3771309 R TIGRFAM: aspartate racemase; PFAM: Asp/Glu racemase; KEGG: yen:YE1289 putative aspartate/glutamate racemase; aspartate racemase complement(3770617..3771309) Serratia proteamaculans 568 5604002 YP_001479636.1 CDS Spro_3410 NC_009832.1 3771376 3771828 R PFAM: transmembrane pair domain protein; KEGG: yen:YE1224 hypothetical protein; transmembrane pair domain-containing protein complement(3771376..3771828) Serratia proteamaculans 568 5604003 YP_001479637.1 CDS Spro_3411 NC_009832.1 3771928 3772818 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: yen:YE1223 putative LysR-family transcriptional regulatory protein; LysR family transcriptional regulator 3771928..3772818 Serratia proteamaculans 568 5604100 YP_001479638.1 CDS Spro_3412 NC_009832.1 3772794 3774455 R PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: yen:YE1222 indole-3-pyruvate decarboxylase; thiamine pyrophosphate binding domain-containing protein complement(3772794..3774455) Serratia proteamaculans 568 5604101 YP_001479639.1 CDS Spro_3413 NC_009832.1 3774704 3775693 D PFAM: aldo/keto reductase; KEGG: yen:YE1221 putative ion channel protein; aldo/keto reductase 3774704..3775693 Serratia proteamaculans 568 5604102 YP_001479640.1 CDS Spro_3414 NC_009832.1 3775924 3776325 D KEGG: ypi:YpsIP31758_1328 hypothetical protein; hypothetical protein 3775924..3776325 Serratia proteamaculans 568 5604185 YP_001479641.1 CDS Spro_3415 NC_009832.1 3776547 3777779 R TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein; KEGG: yen:YE1219 manganese transport protein MntH; manganese transport protein MntH complement(3776547..3777779) Serratia proteamaculans 568 5604186 YP_001479642.1 CDS Spro_3416 NC_009832.1 3778158 3779345 D TIGRFAM: nucleoside transporter; PFAM: Na+ dependent nucleoside transporter; nucleoside recognition domain protein; Na+ dependent nucleoside transporter domain protein; KEGG: yen:YE1217 nucleoside permease; nucleoside transporter 3778158..3779345 Serratia proteamaculans 568 5604187 YP_001479643.1 CDS gltX NC_009832.1 3779962 3781371 R Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase complement(3779962..3781371) Serratia proteamaculans 568 5603084 YP_001479644.1 CDS Spro_3418 NC_009832.1 3782523 3783281 R catalyzes the formation of 2,3-dihydroxybenzoate from 2,3-dihydro-2,3-dihydroxybenzoate; involved in the biosynthesis of siderophores, enterobactin, bacillibactin or vibriobactin; 2,3-dihydroxybenzoate-2,3-dehydrogenase complement(3782523..3783281) Serratia proteamaculans 568 5602605 YP_001479645.1 CDS Spro_3419 NC_009832.1 3783281 3784135 R PFAM: isochorismatase hydrolase; phosphopantetheine-binding; KEGG: kpn:KPN_00613 2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochroismatase; isochorismatase complement(3783281..3784135) Serratia proteamaculans 568 5604205 YP_001479646.1 CDS entE NC_009832.1 3784139 3785767 R bifunctional 2,3-dihydroxybenzoate-AMP ligase/S-dihydroxybenzoyltransferase; activates the carboxylate group of 2,3-dihydroxy-benzoate forming (2,3-dihydroxybenzoyl)adenylate then catalyzes the acylation of holo-entB with 2,3-dihydroxy-benzoate adenylate; enterobactin synthase subunit E complement(3784139..3785767) Serratia proteamaculans 568 5604240 YP_001479647.1 CDS Spro_3421 NC_009832.1 3785776 3786984 R TIGRFAM: isochorismate synthase; PFAM: Chorismate binding-like; KEGG: kpn:KPN_00611 isochorismate synthase; isochorismate synthase complement(3785776..3786984) Serratia proteamaculans 568 5604241 YP_001479648.1 CDS Spro_3422 NC_009832.1 3787183 3788142 D with FepCDG is involved in the transport of ferric enterobactin; iron-enterobactin transporter periplasmic binding protein 3787183..3788142 Serratia proteamaculans 568 5604242 YP_001479649.1 CDS Spro_3423 NC_009832.1 3788129 3789397 R protein p43; inner membrane protein that exports enterobactin to the periplasmic space; member of the major facilitator superfamily (MFS) of transporters; enterobactin exporter EntS complement(3788129..3789397) Serratia proteamaculans 568 5604339 YP_001479650.1 CDS Spro_3424 NC_009832.1 3789533 3790606 D with FepBCG is involved in the transport of ferric enterobactin; iron-enterobactin transporter membrane protein 3789533..3790606 Serratia proteamaculans 568 5604340 YP_001479651.1 CDS Spro_3425 NC_009832.1 3790606 3791631 D with FepBCD is involved in the transport of ferric enterobactin; iron-enterobactin transporter permease 3790606..3791631 Serratia proteamaculans 568 5604341 YP_001479652.1 CDS Spro_3426 NC_009832.1 3791628 3792431 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ecj:JW0580 iron-enterobactin transporter subunit; ABC transporter-like protein 3791628..3792431 Serratia proteamaculans 568 5604342 YP_001479653.1 CDS entF NC_009832.1 3792507 3796484 R with EntB, EntD, and EntE forms the multienzyme complex enterobactin synthase; EntF is the serine activating enzyme which catalyzes the formation of the amide and ester bonds of the cyclic enterobactin; enterobactin synthase subunit F complement(3792507..3796484) Serratia proteamaculans 568 5604343 YP_001479654.1 CDS Spro_3428 NC_009832.1 3796484 3796690 R PFAM: MbtH domain protein; KEGG: tfu:Tfu_1863 putative conserved protein MbtH; MbtH domain-containing protein complement(3796484..3796690) Serratia proteamaculans 568 5604344 YP_001479655.1 CDS Spro_3429 NC_009832.1 3796665 3798035 R PFAM: putative esterase; KEGG: yen:YE3622 enterochelin esterase; enterobactin/ferric enterobactin esterase complement(3796665..3798035) Serratia proteamaculans 568 5604393 YP_001479656.1 CDS Spro_3430 NC_009832.1 3798384 3800663 D Fep; Cbt; Cbr; FeuB; FepA; PfeA; IroN; BfeA; outer membrane receptor of ferric enterobactin and colicins B and D; interacts with the TonB-ExbBD complex which catalyzes the translocation of the siderophore to the periplasmic space; outer membrane receptor FepA 3798384..3800663 Serratia proteamaculans 568 5604394 YP_001479657.1 CDS Spro_3431 NC_009832.1 3800716 3802311 R PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA2801 periplasmic dipeptide transport protein; extracellular solute-binding protein complement(3800716..3802311) Serratia proteamaculans 568 5604395 YP_001479658.1 CDS Spro_3432 NC_009832.1 3802451 3804136 R catalyzes the formation of 2-acetolactate from pyruvate in stationary phase; acetolactate synthase complement(3802451..3804136) Serratia proteamaculans 568 5604457 YP_001479659.1 CDS Spro_3433 NC_009832.1 3804176 3804955 R PFAM: alpha-acetolactate decarboxylase; KEGG: yen:YE4016 alpha-acetolactate decarboxylase; acetolactate decarboxylase complement(3804176..3804955) Serratia proteamaculans 568 5604458 YP_001479660.1 CDS Spro_3434 NC_009832.1 3805335 3806294 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: cvi:CV_4290 probable transcriptional regulator LysR-family; LysR family transcriptional regulator 3805335..3806294 Serratia proteamaculans 568 5604459 YP_001479661.1 CDS Spro_3435 NC_009832.1 3806273 3807064 R PFAM: Ethanolamine ammonia-lyase light chain; KEGG: kpn:KPN_00306 ethanolamine ammonia-lyase small subunit; ethanolamine ammonia-lyase complement(3806273..3807064) Serratia proteamaculans 568 5604460 YP_001479662.1 CDS Spro_3436 NC_009832.1 3807061 3808446 R PFAM: Ethanolamine ammonia lyase large subunit; KEGG: asa:ASA_0956 ethanolamine ammonia-lyase, large subunit; ethanolamine ammonia lyase large subunit complement(3807061..3808446) Serratia proteamaculans 568 5604461 YP_001479663.1 CDS Spro_3437 NC_009832.1 3808587 3809135 D PFAM: protein of unknown function DUF925; KEGG: yen:YE1214 hypothetical protein; hypothetical protein 3808587..3809135 Serratia proteamaculans 568 5604462 YP_001479664.1 CDS Spro_3438 NC_009832.1 3809195 3809671 D KEGG: yen:YE1213 hypothetical protein; hypothetical protein 3809195..3809671 Serratia proteamaculans 568 5604492 YP_001479665.1 CDS Spro_3439 NC_009832.1 3809693 3810394 R PFAM: RES domain protein; KEGG: plu:plu1483 hypothetical protein; RES domain-containing protein complement(3809693..3810394) Serratia proteamaculans 568 5604493 YP_001479666.1 CDS Spro_3440 NC_009832.1 3810387 3811040 R KEGG: plu:plu1482 hypothetical protein; hypothetical protein complement(3810387..3811040) Serratia proteamaculans 568 5604494 YP_001479667.1 CDS Spro_3441 NC_009832.1 3811269 3812189 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ent:Ent638_2936 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(3811269..3812189) Serratia proteamaculans 568 5604577 YP_001479668.1 CDS Spro_3442 NC_009832.1 3812285 3813277 D PFAM: Bile acid:sodium symporter; KEGG: ssn:SSON_2498 putative cytochrome oxidase; bile acid:sodium symporter 3812285..3813277 Serratia proteamaculans 568 5604578 YP_001479669.1 CDS Spro_3443 NC_009832.1 3813312 3813527 R KEGG: ypi:YpsIP31758_1322 hypothetical protein; hypothetical protein complement(3813312..3813527) Serratia proteamaculans 568 5604579 YP_001479670.1 CDS ligA NC_009832.1 3813527 3815548 R this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; NAD-dependent DNA ligase LigA complement(3813527..3815548) Serratia proteamaculans 568 5604610 YP_001479671.1 CDS Spro_3445 NC_009832.1 3815627 3816625 R interacts with cell division protein FitsZ and may be required to anchor septal ring structure; cell division protein ZipA complement(3815627..3816625) Serratia proteamaculans 568 5604611 YP_001479672.1 CDS Spro_3446 NC_009832.1 3816847 3817608 D putative role in sulfur assimilation; putative sulfate transport protein CysZ 3816847..3817608 Serratia proteamaculans 568 5604612 YP_001479673.1 CDS Spro_3447 NC_009832.1 3817793 3818761 D CysK; forms a complex with serine acetyltransferase CysE; functions in cysteine biosynthesis; cysteine synthase A 3817793..3818761 Serratia proteamaculans 568 5604714 YP_001479674.1 CDS Spro_3448 NC_009832.1 3819157 3819414 D TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: eca:ECA0893 PTS system phosphocarrier protein; PTS system phosphohistidinoprotein-hexose phosphotransferase subunit Hpr 3819157..3819414 Serratia proteamaculans 568 5604715 YP_001479675.1 CDS Spro_3449 NC_009832.1 3819461 3821188 D Phosphotransferase system, enzyme I; transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein; part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active-transport system; phosphoenolpyruvate-protein phosphotransferase 3819461..3821188 Serratia proteamaculans 568 5604716 YP_001479676.1 CDS Spro_3450 NC_009832.1 3821238 3821747 D functions in phosphoenolpyruvate-(PEP)-dependent phosphotransferase (PTS) system; functions in the transport and phosphorylation of glucose; PTS system glucose-specific transporter subunit 3821238..3821747 Serratia proteamaculans 568 5604723 YP_001479677.1 CDS Spro_3451 NC_009832.1 3821823 3823151 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: yen:YE1202 putative two-component system sensor kinase; integral membrane sensor signal transduction histidine kinase complement(3821823..3823151) Serratia proteamaculans 568 5604724 YP_001479678.1 CDS Spro_3452 NC_009832.1 3823151 3823831 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: yen:YE1201 putative two-component system response regulator; two component transcriptional regulator complement(3823151..3823831) Serratia proteamaculans 568 5604725 YP_001479679.1 CDS Spro_3453 NC_009832.1 3824041 3824922 R TIGRFAM: cysteine synthase; cysteine synthase B; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: ypi:YpsIP31758_1303 cysteine synthase B; cysteine synthase B complement(3824041..3824922) Serratia proteamaculans 568 5604732 YP_001479680.1 CDS Spro_3454 NC_009832.1 3825427 3826515 R KEGG: yen:YE1197 sulfate transport ATP-binding protein; TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; sulfate/thiosulfate transporter subunit complement(3825427..3826515) Serratia proteamaculans 568 5604733 YP_001479681.1 CDS cysW NC_009832.1 3826505 3827380 R Part of the ABC transporter complex cysAWTP involved in sulfate/thiosulfate import; sulfate/thiosulfate transporter permease complement(3826505..3827380) Serratia proteamaculans 568 5604734 YP_001479682.1 CDS Spro_3456 NC_009832.1 3827380 3828213 R TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysT; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypi:YpsIP31758_1300 sulfate/thiosulfate ABC transporter, permease protein CysT; sulfate/thiosulfate transporter subunit complement(3827380..3828213) Serratia proteamaculans 568 5604744 YP_001479683.1 CDS Spro_3457 NC_009832.1 3828213 3829235 R TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: ypi:YpsIP31758_1299 sulfate/thiosulfate ABC transporter, periplasmic sulfate/thiosulfate-binding protein; thiosulfate transporter subunit complement(3828213..3829235) Serratia proteamaculans 568 5604745 YP_001479684.1 CDS Spro_3458 NC_009832.1 3829437 3830336 R TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: ypp:YPDSF_2130 hypothetical protein; Dyp-type peroxidase family protein complement(3829437..3830336) Serratia proteamaculans 568 5604746 YP_001479685.1 CDS Spro_3459 NC_009832.1 3830504 3831088 R PFAM: protein of unknown function DUF1131; KEGG: ypi:YpsIP31758_1290 putative lipoprotein; hypothetical protein complement(3830504..3831088) Serratia proteamaculans 568 5604758 YP_001479686.1 CDS Spro_3460 NC_009832.1 3831222 3831686 R KEGG: kpn:KPN_02776 hypothetical protein; hypothetical protein complement(3831222..3831686) Serratia proteamaculans 568 5604759 YP_001479687.1 CDS Spro_3461 NC_009832.1 3831862 3832260 D PFAM: conserved hypothetical protein; KEGG: yen:YE1185 hypothetical protein; hypothetical protein 3831862..3832260 Serratia proteamaculans 568 5604760 YP_001479688.1 CDS Spro_3462 NC_009832.1 3832304 3832729 R PFAM: GCN5-related N-acetyltransferase; KEGG: ent:Ent638_2955 GCN5-related N-acetyltransferase; putative acetyltransferase complement(3832304..3832729) Serratia proteamaculans 568 5604764 YP_001479689.1 CDS Spro_3463 NC_009832.1 3832935 3833834 D PFAM: cell wall hydrolase/autolysin; KEGG: ent:Ent638_2956 N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-l-alanine amidase I 3832935..3833834 Serratia proteamaculans 568 5604765 YP_001479690.1 CDS Spro_3464 NC_009832.1 3833904 3834824 D catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase 3833904..3834824 Serratia proteamaculans 568 5604766 YP_001479691.1 CDS Spro_3465 NC_009832.1 3834821 3835279 D PFAM: protein of unknown function DUF188; KEGG: yen:YE1167 hypothetical protein; hypothetical protein 3834821..3835279 Serratia proteamaculans 568 5604798 YP_001479692.1 CDS Spro_3466 NC_009832.1 3835297 3837540 R PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sbo:SBO_P082 colicin Js sensitive receptor protein; TonB-dependent receptor complement(3835297..3837540) Serratia proteamaculans 568 5604799 YP_001479693.1 CDS Spro_3467 NC_009832.1 3837672 3839807 R PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9A prolyl oligopeptidase domain protein beta-propeller; KEGG: plu:plu2716 protease II (oligopeptidase B); oligopeptidase B complement(3837672..3839807) Serratia proteamaculans 568 5604800 YP_001479694.1 CDS Spro_3468 NC_009832.1 3839883 3840683 R TIGRFAM: TonB family protein; KEGG: sbo:SBO_P083 TonB-like colicin Js sensitive putative membrane protein; TonB family protein complement(3839883..3840683) Serratia proteamaculans 568 5604834 YP_001479695.1 CDS Spro_3469 NC_009832.1 3840786 3841640 R PFAM: protein of unknown function DUF399; KEGG: plu:plu2718 hypothetical protein; hypothetical protein complement(3840786..3841640) Serratia proteamaculans 568 5604835 YP_001479696.1 CDS Spro_3470 NC_009832.1 3841830 3843239 D PFAM: amino acid permease-associated region; KEGG: eca:ECA2798 probable S-methylmethionine permease; S-methylmethionine transporter 3841830..3843239 Serratia proteamaculans 568 5604836 YP_001479697.1 CDS mmuM NC_009832.1 3843229 3844167 D converts homocysteine and S-adenosyl-methionine to methionine and S-adenosyl-homocysteine or S-methyl-methionine and homocysteine to two methionines; homocysteine methyltransferase 3843229..3844167 Serratia proteamaculans 568 5604855 YP_001479698.1 CDS Spro_3472 NC_009832.1 3844221 3846500 R NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme complement(3844221..3846500) Serratia proteamaculans 568 5604856 YP_001479699.1 CDS Spro_3473 NC_009832.1 3846986 3847369 R KEGG: ypk:y0188 hypothetical protein; hypothetical protein complement(3846986..3847369) Serratia proteamaculans 568 5604857 YP_001479700.1 CDS Spro_3474 NC_009832.1 3847366 3847767 R KEGG: yen:YE1672 putative phagelysin; putative phagelysin complement(3847366..3847767) Serratia proteamaculans 568 5604861 YP_001479701.1 CDS Spro_3475 NC_009832.1 3847757 3848083 R TIGRFAM: phage holin, lambda family; PFAM: Holin phage lambda; KEGG: spt:SPA2398 lysis (holin); phage holin complement(3847757..3848083) Serratia proteamaculans 568 5604862 YP_001479702.1 CDS Spro_3476 NC_009832.1 3848380 3849879 D KEGG: sde:Sde_3870 chitinase; PFAM: glycoside hydrolase family 18; Carbohydrate-binding family V/XII; SMART: chitinase II; chitinase 3848380..3849879 Serratia proteamaculans 568 5604863 YP_001479703.1 CDS Spro_3477 NC_009832.1 3849977 3850918 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_0757 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(3849977..3850918) Serratia proteamaculans 568 5604864 YP_001479704.1 CDS Spro_3478 NC_009832.1 3851324 3851917 D PFAM: chitin-binding domain 3 protein; KEGG: bca:BCE_2855 chitin binding protein, putative; chitin-binding domain-containing protein 3851324..3851917 Serratia proteamaculans 568 5604865 YP_001479705.1 CDS Spro_3479 NC_009832.1 3852136 3853086 D KEGG: eca:ECA0862 transaldolase; TIGRFAM: transaldolase; PFAM: Transaldolase; transaldolase A 3852136..3853086 Serratia proteamaculans 568 5604866 YP_001479706.1 CDS Spro_3480 NC_009832.1 3853104 3855098 D catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 3853104..3855098 Serratia proteamaculans 568 5604895 YP_001479707.1 CDS Spro_3481 NC_009832.1 3855733 3856281 D PFAM: UreE urease accessory domain protein; KEGG: ypi:YpsIP31758_1080 urease accessory protein UreE; UreE urease accessory domain-containing protein 3855733..3856281 Serratia proteamaculans 568 5604896 YP_001479708.1 CDS Spro_3482 NC_009832.1 3856396 3856818 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: sgl:SG1549 putative right origin-binding protein; AraC family transcriptional regulator 3856396..3856818 Serratia proteamaculans 568 5604897 YP_001479709.1 CDS Spro_3483 NC_009832.1 3856868 3857443 R PFAM: NUDIX hydrolase; KEGG: yen:YE1161 hypothetical protein; NUDIX hydrolase complement(3856868..3857443) Serratia proteamaculans 568 5604912 YP_001479710.1 CDS Spro_3484 NC_009832.1 3857575 3858192 R with NapABDFGH functions as a nitrate reductase; NapC functions as an electron shuttle between NapAB and NapGH or quinone; cytochrome c-type protein NapC complement(3857575..3858192) Serratia proteamaculans 568 5604913 YP_001479711.1 CDS napB NC_009832.1 3858204 3858653 R small subunit of periplasmic nitrate reductase; receives electrons from the membrane-bound NapC and passes them to NapA; citrate reductase cytochrome c-type subunit complement(3858204..3858653) Serratia proteamaculans 568 5604914 YP_001479712.1 CDS Spro_3486 NC_009832.1 3858709 3861195 R periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC; nitrate reductase catalytic subunit complement(3858709..3861195) Serratia proteamaculans 568 5604924 YP_001479713.1 CDS Spro_3487 NC_009832.1 3861192 3861458 R PFAM: NapD family protein; KEGG: ypp:YPDSF_2144 hypothetical protein; assembly protein for periplasmic nitrate reductase complement(3861192..3861458) Serratia proteamaculans 568 5604925 YP_001479714.1 CDS Spro_3488 NC_009832.1 3861448 3861945 R TIGRFAM: ferredoxin-type protein NapF; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ypi:YpsIP31758_1271 ferredoxin-type protein NapF; ferredoxin-type protein NapF complement(3861448..3861945) Serratia proteamaculans 568 5604926 YP_001479715.1 CDS Spro_3489 NC_009832.1 3862495 3864177 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: eca:ECA1900 nitrate/nitrite sensor protein; nitrate/nitrite sensor protein NarQ 3862495..3864177 Serratia proteamaculans 568 5604927 YP_001479716.1 CDS Spro_3490 NC_009832.1 3864340 3864972 D PFAM: regulatory protein LuxR; response regulator receiver; Bacterio-opsin activator HTH domain protein; KEGG: yen:YE1153 nitrate/nitrite response regulator protein NarP; two component LuxR family transcriptional regulator 3864340..3864972 Serratia proteamaculans 568 5604928 YP_001479717.1 CDS Spro_3491 NC_009832.1 3864999 3865292 R KEGG: ypi:YpsIP31758_1269 hypothetical protein; hypothetical protein complement(3864999..3865292) Serratia proteamaculans 568 5604929 YP_001479718.1 CDS Spro_3492 NC_009832.1 3865560 3867641 D TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: yen:YE1151 multidrug efflux protein; hydrophobe/amphiphile efflux-1 (HAE1) family protein 3865560..3867641 Serratia proteamaculans 568 5604945 YP_001479719.1 CDS Spro_3493 NC_009832.1 3867599 3868696 D KEGG: yen:YE1151 multidrug efflux protein; multidrug efflux protein 3867599..3868696 Serratia proteamaculans 568 5604946 YP_001479720.1 CDS Spro_3494 NC_009832.1 3869115 3871262 R PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ent:Ent638_1099 TonB-dependent receptor; TonB-dependent receptor complement(3869115..3871262) Serratia proteamaculans 568 5604947 YP_001479721.1 CDS Spro_3495 NC_009832.1 3871549 3872619 D KEGG: ent:Ent638_1100 putative receptor; putative receptor 3871549..3872619 Serratia proteamaculans 568 5604972 YP_001479722.1 CDS Spro_3496 NC_009832.1 3872628 3874799 D TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: azo:azo2994 probable TonB-dependent receptor; TonB-dependent siderophore receptor 3872628..3874799 Serratia proteamaculans 568 5604973 YP_001479723.1 CDS Spro_3497 NC_009832.1 3874927 3875409 D KEGG: yen:YE1149 hypothetical protein; hypothetical protein 3874927..3875409 Serratia proteamaculans 568 5604974 YP_001479724.1 CDS Spro_3498 NC_009832.1 3875421 3875852 D PFAM: GCN5-related N-acetyltransferase; KEGG: bja:blr1088 putative GNAT family acetyltransferase; GCN5-like N-acetyltransferase 3875421..3875852 Serratia proteamaculans 568 5604982 YP_001479725.1 CDS Spro_3499 NC_009832.1 3875943 3876368 R PFAM: GCN5-related N-acetyltransferase; KEGG: cvi:CV_2792 probable acetyltransferase; GCN5-like N-acetyltransferase complement(3875943..3876368) Serratia proteamaculans 568 5604983 YP_001479726.1 CDS Spro_3500 NC_009832.1 3876598 3876963 D PFAM: arsenate reductase and related; KEGG: ypi:YpsIP31758_1256 hypothetical protein; hypothetical protein 3876598..3876963 Serratia proteamaculans 568 5604984 YP_001479727.1 CDS Spro_3501 NC_009832.1 3876960 3878087 D dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 3876960..3878087 Serratia proteamaculans 568 5605029 YP_001479728.1 CDS Spro_3502 NC_009832.1 3878084 3878758 D PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: ypi:YpsIP31758_1254 D-alanyl-D-alanine carboxypeptidase family protein; peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin 3878084..3878758 Serratia proteamaculans 568 5605030 YP_001479729.1 CDS Spro_3503 NC_009832.1 3878761 3878946 D KEGG: yen:YE1145 hypothetical protein; hypothetical protein 3878761..3878946 Serratia proteamaculans 568 5605031 YP_001479730.1 CDS Spro_3504 NC_009832.1 3879100 3879789 R Displays esterase activity toward palmitoyl-CoA and pNP-butyrate; esterase YpfH complement(3879100..3879789) Serratia proteamaculans 568 5605095 YP_001479731.1 CDS Spro_3505 NC_009832.1 3879907 3881919 R PFAM: GCN5-related N-acetyltransferase; protein of unknown function DUF699 ATPase putative; KEGG: yps:YPTB2778 putative acetyltransferase; hypothetical protein complement(3879907..3881919) Serratia proteamaculans 568 5605096 YP_001479732.1 CDS Spro_3506 NC_009832.1 3882121 3882987 R PFAM: protein of unknown function zinc metallopeptidase putative; KEGG: ypi:YpsIP31758_1250 metalloprotease-like protein; hypothetical protein complement(3882121..3882987) Serratia proteamaculans 568 5605097 YP_001479733.1 CDS Spro_3507 NC_009832.1 3883152 3883865 R catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase complement(3883152..3883865) Serratia proteamaculans 568 5605106 YP_001479734.1 CDS Spro_3508 NC_009832.1 3883992 3885044 R PFAM: NlpBDapX family lipoprotein; KEGG: yen:YE1138 lipoprotein; lipoprotein complement(3883992..3885044) Serratia proteamaculans 568 5605107 YP_001479735.1 CDS Spro_3509 NC_009832.1 3885061 3885942 R catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase complement(3885061..3885942) Serratia proteamaculans 568 5605108 YP_001479736.1 CDS gcvR NC_009832.1 3885972 3886658 D negative transcriptional regulator of the gcvTHP operon; glycine cleavage system transcriptional repressor 3885972..3886658 Serratia proteamaculans 568 5605130 YP_001479737.1 CDS bcp NC_009832.1 3886661 3887125 D bacterioferritin comigratory protein; thiol peroxidase; thioredoxin-dependent; hydroperoxide peroxidase; in Escherichia coli this enzyme preferentially reduces linoleic acid hydroperoxide; contains an active site cysteine; thioredoxin-dependent thiol peroxidase 3886661..3887125 Serratia proteamaculans 568 5605131 YP_001479738.1 CDS Spro_3512 NC_009832.1 3887175 3888245 R PFAM: protein of unknown function UPF0118; KEGG: yen:YE1133 hypothetical protein; hypothetical protein complement(3887175..3888245) Serratia proteamaculans 568 5605132 YP_001479739.1 CDS Spro_3513 NC_009832.1 3888413 3889030 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: plu:plu4154 hypothetical protein; lysine exporter protein LysE/YggA complement(3888413..3889030) Serratia proteamaculans 568 5605151 YP_001479740.1 CDS Spro_3514 NC_009832.1 3889224 3889685 D PFAM: regulatory protein AsnC/Lrp family; Helix-turn-helix type 11 domain protein; KEGG: plu:plu4153 hypothetical protein; AsnC family transcriptional regulator 3889224..3889685 Serratia proteamaculans 568 5605152 YP_001479741.1 CDS Spro_3515 NC_009832.1 3889727 3890935 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: swi:Swit_2959 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(3889727..3890935) Serratia proteamaculans 568 5605153 YP_001479742.1 CDS Spro_3516 NC_009832.1 3891083 3891625 R TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: swi:Swit_2958 transcriptional regulator, BadM/Rrf2 family; BadM/Rrf2 family transcriptional regulator complement(3891083..3891625) Serratia proteamaculans 568 5605163 YP_001479743.1 CDS Spro_3517 NC_009832.1 3891974 3893437 D PFAM: peptidase M48 Ste24p; KEGG: eca:ECA1259 hypothetical protein; peptidase M48 Ste24p 3891974..3893437 Serratia proteamaculans 568 5605164 YP_001479744.1 CDS Spro_3518 NC_009832.1 3893458 3893811 D TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: ypi:YpsIP31758_1238 arsenate reductase (glutaredoxin); arsenate reductase 3893458..3893811 Serratia proteamaculans 568 5605165 YP_001479745.1 CDS Spro_3519 NC_009832.1 3893863 3894474 R controls initiation of DNA replication by inhibiting re-initiation of replication, promotes hydrolysis of DnaA-bound ATP; DNA replication initiation factor complement(3893863..3894474) Serratia proteamaculans 568 5605202 YP_001479746.1 CDS Spro_3520 NC_009832.1 3894793 3895308 D KEGG: kpn:KPN_01758 putative cell envelope integrity inner membrane protein TolA; putative cell envelope integrity inner membrane protein TolA 3894793..3895308 Serratia proteamaculans 568 5605203 YP_001479747.1 CDS Spro_3521 NC_009832.1 3895338 3895586 D PFAM: Transglycosylase-associated protein; KEGG: eca:ECA2044 hypothetical protein; hypothetical protein 3895338..3895586 Serratia proteamaculans 568 5605204 YP_001479748.1 CDS Spro_3522 NC_009832.1 3895638 3896927 R TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: ypi:YpsIP31758_1236 uracil permease; uracil transporter complement(3895638..3896927) Serratia proteamaculans 568 5605213 YP_001479749.1 CDS upp NC_009832.1 3896990 3897619 R Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase complement(3896990..3897619) Serratia proteamaculans 568 5605214 YP_001479750.1 CDS Spro_3524 NC_009832.1 3897830 3898909 D KEGG: yen:YE1127 putative phosphoribosylaminoimidazole synthetase; TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; phosphoribosylformylglycinamidine cyclo-ligase 3897830..3898909 Serratia proteamaculans 568 5605215 YP_001479751.1 CDS purN NC_009832.1 3898909 3899547 D glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate; phosphoribosylglycinamide formyltransferase 3898909..3899547 Serratia proteamaculans 568 5605247 YP_001479752.1 CDS Spro_3526 NC_009832.1 3899598 3899867 R TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; KEGG: csa:Csal_0195 plasmid stabilization system; addiction module antitoxin complement(3899598..3899867) Serratia proteamaculans 568 5605248 YP_001479753.1 CDS Spro_3527 NC_009832.1 3899871 3900065 R KEGG: pst:PSPTOA0058 hypothetical protein; hypothetical protein complement(3899871..3900065) Serratia proteamaculans 568 5605249 YP_001479754.1 CDS Spro_3528 NC_009832.1 3900210 3900764 D PFAM: GCN5-related N-acetyltransferase; KEGG: ypi:YpsIP31758_1232 spermidine N(1)-acetyltransferase; GCN5-like N-acetyltransferase 3900210..3900764 Serratia proteamaculans 568 5605281 YP_001479755.1 CDS Spro_3531 NC_009832.1 3902550 3902867 R PFAM: protein of unknown function DUF596; KEGG: pmu:PM1634 unknown; hypothetical protein complement(3902550..3902867) Serratia proteamaculans 568 5605283 YP_001479756.1 CDS Spro_3532 NC_009832.1 3902893 3903138 R KEGG: plu:plu3577 hypothetical protein; hypothetical protein complement(3902893..3903138) Serratia proteamaculans 568 5605298 YP_001479757.1 CDS Spro_3533 NC_009832.1 3903300 3903593 R PFAM: protein of unknown function DUF596; KEGG: xft:PD2117 hypothetical protein; hypothetical protein complement(3903300..3903593) Serratia proteamaculans 568 5605299 YP_001479758.1 CDS Spro_3534 NC_009832.1 3903807 3903986 R KEGG: xft:PD1240 hypothetical protein; hypothetical protein complement(3903807..3903986) Serratia proteamaculans 568 5605300 YP_001479759.1 CDS Spro_3535 NC_009832.1 3903999 3904295 R KEGG: plu:plu3577 hypothetical protein; hypothetical protein complement(3903999..3904295) Serratia proteamaculans 568 5605310 YP_001479760.1 CDS Spro_3536 NC_009832.1 3904457 3904819 R PFAM: protein of unknown function DUF596; KEGG: xft:PD1241 hypothetical protein; hypothetical protein complement(3904457..3904819) Serratia proteamaculans 568 5605311 YP_001479761.1 CDS Spro_3537 NC_009832.1 3904828 3905100 R KEGG: xft:PD2116 hemagglutinin-like secreted protein; hemagglutinin-like secreted protein complement(3904828..3905100) Serratia proteamaculans 568 5605312 YP_001479762.1 CDS Spro_3538 NC_009832.1 3905184 3905996 R ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein complement(3905184..3905996) Serratia proteamaculans 568 5605319 YP_001479763.1 CDS Spro_3539 NC_009832.1 3906025 3907677 R TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yps:YPTB2800 putative ABC phosphate transporter, permease subunit; phosphate ABC transporter inner membrane subunit PstA complement(3906025..3907677) Serratia proteamaculans 568 5605320 YP_001479764.1 CDS Spro_3540 NC_009832.1 3907674 3909848 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypi:YpsIP31758_1228 phosphate ABC transporter, permease protein PstC; binding-protein-dependent transport systems inner membrane component complement(3907674..3909848) Serratia proteamaculans 568 5605321 YP_001479765.1 CDS Spro_3541 NC_009832.1 3910243 3912306 D catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 3910243..3912306 Serratia proteamaculans 568 5605342 YP_001479766.1 CDS Spro_3542 NC_009832.1 3912317 3913867 D PFAM: Ppx/GppA phosphatase; KEGG: ypi:YpsIP31758_1226 exopolyphosphatase; exopolyphosphatase 3912317..3913867 Serratia proteamaculans 568 5605343 YP_001479767.1 CDS Spro_3543 NC_009832.1 3913901 3916153 R PFAM: EAL domain protein; SMART: GGDEF domain containing protein; KEGG: kpn:KPN_02828 putative cytochrome c-type biogenesis protein; diguanylate cyclase/phosphodiesterase complement(3913901..3916153) Serratia proteamaculans 568 5605344 YP_001479768.1 CDS Spro_3544 NC_009832.1 3916519 3916698 D KEGG: ypi:YpsIP31758_1225 hypothetical protein; hypothetical protein 3916519..3916698 Serratia proteamaculans 568 5605345 YP_001479769.1 CDS Spro_3545 NC_009832.1 3916889 3918322 D TIGRFAM: magnesium transporter; PFAM: CBS domain containing protein; MgtE integral membrane region; MgtE intracellular region; KEGG: yen:YE1117 putative divalent cation transport protein; magnesium transporter 3916889..3918322 Serratia proteamaculans 568 5605346 YP_001479770.1 CDS Spro_3546 NC_009832.1 3918586 3918936 D PFAM: MuA-transposase/repressor protein CI DNA-binding; KEGG: ypi:YpsIP31758_3614 hypothetical protein; MuA-transposase/repressor protein CI DNA-binding 3918586..3918936 Serratia proteamaculans 568 5605347 YP_001479771.1 CDS Spro_3547 NC_009832.1 3918942 3920480 R PFAM: helix-turn-helix- domain containing protein AraC type; HhH-GPD family protein; Ada metal-binding domain protein; AlkA domain protein; KEGG: reh:H16_B2551 DNA-3-methyladenine glycosylase II, adenosine deaminase; AraC family transcriptional regulator complement(3918942..3920480) Serratia proteamaculans 568 5605351 YP_001479772.1 CDS Spro_3548 NC_009832.1 3920605 3921957 D KEGG: yen:YE1115 putative heat shock protein; putative chaperone 3920605..3921957 Serratia proteamaculans 568 5605352 YP_001479773.1 CDS Spro_3549 NC_009832.1 3922006 3922569 D PFAM: GCN5-related N-acetyltransferase; KEGG: pat:Patl_0113 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase 3922006..3922569 Serratia proteamaculans 568 5605353 YP_001479774.1 CDS Spro_3550 NC_009832.1 3922563 3923072 D KEGG: asa:ASA_4263 predicted kinase; kinase 3922563..3923072 Serratia proteamaculans 568 5605429 YP_001479775.1 CDS Spro_3551 NC_009832.1 3923078 3924031 R PFAM: aldo/keto reductase; KEGG: eca:ECA3182 probable oxidoreductase; aldo/keto reductase complement(3923078..3924031) Serratia proteamaculans 568 5605430 YP_001479776.1 CDS Spro_3552 NC_009832.1 3924302 3925543 D Part of a tripartite efflux system composed of MdtA, MdtB and MdtC which confers resistance against novobiocin and deoxycholate; multidrug efflux system subunit MdtA 3924302..3925543 Serratia proteamaculans 568 5605431 YP_001479777.1 CDS Spro_3553 NC_009832.1 3925543 3928662 D Part of a tripartite efflux system composed of MdtA, MdtB and MdtC which confers resistance against novobiocin and deoxycholate; multidrug efflux system subunit MdtB 3925543..3928662 Serratia proteamaculans 568 5605455 YP_001479778.1 CDS Spro_3554 NC_009832.1 3928659 3931739 D Part of a tripartite efflux system composed of MdtA, MdtB and MdtC; confers resistance against novobiocin and deoxycholate; multidrug efflux system subunit MdtC 3928659..3931739 Serratia proteamaculans 568 5605456 YP_001479779.1 CDS Spro_3555 NC_009832.1 3931750 3933183 D PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE1106 hypothetical protein; multidrug efflux system protein MdtE 3931750..3933183 Serratia proteamaculans 568 5605457 YP_001479780.1 CDS Spro_3556 NC_009832.1 3933180 3934562 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: yen:YE1105 two-component system, sensor kinase; signal transduction histidine-protein kinase BaeS 3933180..3934562 Serratia proteamaculans 568 5605470 YP_001479781.1 CDS Spro_3557 NC_009832.1 3934559 3935278 D response regulator in two-component regulatory system with BaeS; regulator of RNA synthesis, flagellar biosynthesis, chemotaxis and transport; DNA-binding transcriptional regulator BaeR 3934559..3935278 Serratia proteamaculans 568 5605471 YP_001479782.1 CDS Spro_3558 NC_009832.1 3935275 3935661 R PFAM: PilT protein domain protein; KEGG: hso:HS_1769 hypothetical protein; PilT domain-containing protein complement(3935275..3935661) Serratia proteamaculans 568 5605472 YP_001479783.1 CDS Spro_3559 NC_009832.1 3935664 3935927 R PFAM: SpoVT/AbrB domain protein; KEGG: apl:APL_0666 hypothetical protein; SpoVT/AbrB domain-containing protein complement(3935664..3935927) Serratia proteamaculans 568 5605488 YP_001479784.1 CDS Spro_3560 NC_009832.1 3936280 3936618 D PFAM: protein of unknown function DUF1508; KEGG: ypi:YpsIP31758_1209 hypothetical protein; hypothetical protein 3936280..3936618 Serratia proteamaculans 568 5605489 YP_001479785.1 CDS Spro_3561 NC_009832.1 3936797 3938149 D PFAM: peptidase U32; KEGG: yen:YE1100 putative protease; peptidase U32 3936797..3938149 Serratia proteamaculans 568 5605490 YP_001479786.1 CDS Spro_3562 NC_009832.1 3938636 3939553 D cytosolic protein with phosphatidylglycerol kinase activity; undetermined physiological role; lipid kinase 3938636..3939553 Serratia proteamaculans 568 5605491 YP_001479787.1 CDS Spro_3563 NC_009832.1 3939735 3940949 D PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: eca:ECA0917 putative starvation sensing mandelate racemase / muconate lactonizing enzyme; mandelate racemase/muconate lactonizing protein 3939735..3940949 Serratia proteamaculans 568 5605492 YP_001479788.1 CDS Spro_3564 NC_009832.1 3940937 3941980 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: kpn:KPN_03621 putative dehydrogenase, NAD(P)-binding, starvation-sensing protein; alcohol dehydrogenase 3940937..3941980 Serratia proteamaculans 568 5605493 YP_001479789.1 CDS Spro_3565 NC_009832.1 3942069 3943358 D PFAM: major facilitator superfamily MFS_1; KEGG: kpn:KPN_03622 putative transport protein; major facilitator transporter 3942069..3943358 Serratia proteamaculans 568 5605497 YP_001479790.1 CDS Spro_3566 NC_009832.1 3943417 3944889 D PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: eca:ECA0920 probable carbohydrate oxidoreductase; mannitol dehydrogenase domain-containing protein 3943417..3944889 Serratia proteamaculans 568 5605498 YP_001479791.1 CDS Spro_3567 NC_009832.1 3945017 3945703 D PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: eca:ECA0921 GntR-family transcriptional regulator; GntR family transcriptional regulator 3945017..3945703 Serratia proteamaculans 568 5605499 YP_001479792.1 CDS Spro_3568 NC_009832.1 3945918 3946967 D catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate; fructose-bisphosphate aldolase 3945918..3946967 Serratia proteamaculans 568 5605503 YP_001479793.1 CDS Spro_3569 NC_009832.1 3947234 3947782 D TIGRFAM: PTS system, glucitol/sorbitol-specific, IIC subunit; PFAM: PTS system protein II sorbitol-specific factor; KEGG: yen:YE1098 PTS system, glucitol/sorbitol-specific IIC2 component; PTS system glucitol/sorbitol-specific transporter subunit IIC 3947234..3947782 Serratia proteamaculans 568 5605504 YP_001479794.1 CDS Spro_3570 NC_009832.1 3947798 3948778 D KEGG: yen:YE1097 PTS system, glucitol/sorbitol-specific IIBC component; TIGRFAM: PTS system, glucitol/sorbitol-specific, IIBC subunit; PFAM: Sorbitol phosphotransferase protein II domain protein; PTS system glucitol/sorbitol-specific transporter subunit IIBC 3947798..3948778 Serratia proteamaculans 568 5605505 YP_001479795.1 CDS Spro_3571 NC_009832.1 3948801 3949163 D phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system glucitol/sorbitol-specific transporter subunit IIA 3948801..3949163 Serratia proteamaculans 568 5605524 YP_001479796.1 CDS Spro_3572 NC_009832.1 3949174 3949953 D catalyzes the conversion of sorbitol 6-phosphate into fructose 6-phosphate; sorbitol-6-phosphate dehydrogenase 3949174..3949953 Serratia proteamaculans 568 5605525 YP_001479797.1 CDS Spro_3573 NC_009832.1 3950005 3950361 D regulator for glucitol utilization; DNA-binding transcriptional activator GutM 3950005..3950361 Serratia proteamaculans 568 5605526 YP_001479798.1 CDS srlR NC_009832.1 3950445 3951218 D regulates genes involved in glucitol utilization; DNA-binding transcriptional repressor SrlR 3950445..3951218 Serratia proteamaculans 568 5605543 YP_001479799.1 CDS gutQ NC_009832.1 3951211 3952182 D catalyzes the conversion of D-arabinose 5-phosphate to D-ribulose-5-phosphate; D-arabinose 5-phosphate isomerase 3951211..3952182 Serratia proteamaculans 568 5605544 YP_001479800.1 CDS Spro_3576 NC_009832.1 3952243 3952701 R PFAM: Inhibitor of vertebrate lysozyme; KEGG: yps:YPTB2822 hypothetical protein; inhibitor of vertebrate lysozyme complement(3952243..3952701) Serratia proteamaculans 568 5605545 YP_001479801.1 CDS Spro_3577 NC_009832.1 3952788 3953588 R catalyzes the formation of 4-amino-2-methyl-5-diphosphomethylpyrimidine; phosphomethylpyrimidine kinase complement(3952788..3953588) Serratia proteamaculans 568 5605593 YP_001479802.1 CDS Spro_3578 NC_009832.1 3953585 3954379 R catalyzes the formation of 4-methyl-5-(2-phosphoethyl)-thiazole and ADP from 4-methyl-5-(2-hydroxyethyl)-thiazole and ATP; hydroxyethylthiazole kinase complement(3953585..3954379) Serratia proteamaculans 568 5605594 YP_001479803.1 CDS Spro_3579 NC_009832.1 3954575 3955000 D PFAM: GCN5-related N-acetyltransferase; KEGG: yen:YE1087 putative acetyltransferase; GCN5-like N-acetyltransferase 3954575..3955000 Serratia proteamaculans 568 5605595 YP_001479804.1 CDS Spro_3580 NC_009832.1 3955042 3956307 R PFAM: major facilitator superfamily MFS_1; KEGG: ecj:JW3845 predicted transporter; major facilitator transporter complement(3955042..3956307) Serratia proteamaculans 568 5605599 YP_001479805.1 CDS Spro_3581 NC_009832.1 3956415 3957392 R PFAM: Xylose isomerase domain protein TIM barrel; KEGG: ecs:ECs4795 hypothetical protein; xylose isomerase domain-containing protein complement(3956415..3957392) Serratia proteamaculans 568 5605600 YP_001479806.1 CDS Spro_3582 NC_009832.1 3957402 3958109 R PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: ecs:ECs4794 putative transcriptional regulator; GntR family transcriptional regulator complement(3957402..3958109) Serratia proteamaculans 568 5605601 YP_001479807.1 CDS Spro_3583 NC_009832.1 3958225 3959460 R PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA0370 hypothetical protein; major facilitator transporter complement(3958225..3959460) Serratia proteamaculans 568 5605691 YP_001479808.1 CDS Spro_3584 NC_009832.1 3959556 3960005 D PFAM: helix-turn-helix HxlR type; KEGG: pfl:PFL_3943 hypothetical protein; HxlR family transcriptional regulator 3959556..3960005 Serratia proteamaculans 568 5605692 YP_001479809.1 CDS Spro_3585 NC_009832.1 3960036 3960344 R PFAM: Fels-1 Propage domain protein; KEGG: bpd:BURPS668_1560 putative prophage protein; Fels-1 Propage domain-containing protein complement(3960036..3960344) Serratia proteamaculans 568 5605693 YP_001479810.1 CDS Spro_3586 NC_009832.1 3960543 3961343 D PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: ypi:YpsIP31758_2990 RNA pseudouridine synthase family protein; pseudouridine synthase 3960543..3961343 Serratia proteamaculans 568 5605699 YP_001479811.1 CDS Spro_3587 NC_009832.1 3961366 3964401 R TIGRFAM: outer membrane autotransporter barrel domain; PFAM: Autotransporter beta- domain protein; KEGG: psp:PSPPH_0790 autotransporter, putative; outer membrane autotransporter complement(3961366..3964401) Serratia proteamaculans 568 5605700 YP_001479812.1 CDS Spro_3588 NC_009832.1 3964620 3964934 R KEGG: bam:Bamb_5719 hypothetical protein; hypothetical protein complement(3964620..3964934) Serratia proteamaculans 568 5605701 YP_001479813.1 CDS Spro_3589 NC_009832.1 3965112 3965744 D PFAM: regulatory protein LuxR; response regulator receiver; Bacterio-opsin activator HTH domain protein; Sigma-70 region 4 type 2; KEGG: reh:H16_B0523 response regulator, NarL-family; two component LuxR family transcriptional regulator 3965112..3965744 Serratia proteamaculans 568 5605760 YP_001479814.1 CDS Spro_3590 NC_009832.1 3965741 3967525 D PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: reh:H16_B0524 signal transduction histidine kinase containing a receiver domain (hybrid); integral membrane sensor hybrid histidine kinase 3965741..3967525 Serratia proteamaculans 568 5605761 YP_001479815.1 CDS Spro_3591 NC_009832.1 3967602 3968435 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: sma:SAV492 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase complement(3967602..3968435) Serratia proteamaculans 568 5605762 YP_001479816.1 CDS Spro_3592 NC_009832.1 3968562 3968936 D PFAM: helix-turn-helix HxlR type; KEGG: sma:SAV491 transcriptional regulator; HxlR family transcriptional regulator 3968562..3968936 Serratia proteamaculans 568 5605763 YP_001479817.1 CDS Spro_3593 NC_009832.1 3968948 3969487 R PFAM: GCN5-related N-acetyltransferase; KEGG: cvi:CV_2338 probable ribosomal-protein-alanine N-acetyltransferase; GCN5-like N-acetyltransferase complement(3968948..3969487) Serratia proteamaculans 568 5605764 YP_001479818.1 CDS Spro_3594 NC_009832.1 3969571 3970752 R PFAM: major facilitator superfamily MFS_1; KEGG: sdn:Sden_3182 major facilitator superfamily MFS_1; major facilitator transporter complement(3969571..3970752) Serratia proteamaculans 568 5605765 YP_001479819.1 CDS guaA NC_009832.1 3970951 3972528 R contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase complement(3970951..3972528) Serratia proteamaculans 568 5605783 YP_001479820.1 CDS Spro_3596 NC_009832.1 3972630 3974093 R catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase complement(3972630..3974093) Serratia proteamaculans 568 5605784 YP_001479821.1 CDS xseA NC_009832.1 3974264 3975640 D bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 3974264..3975640 Serratia proteamaculans 568 5605785 YP_001479822.1 CDS Spro_3598 NC_009832.1 3975647 3978019 R PFAM: glycoside hydrolase family 31; KEGG: ypi:YpsIP31758_0924 glycosyl hydrolase, family 31 protein; alpha-glucosidase complement(3975647..3978019) Serratia proteamaculans 568 5605815 YP_001479823.1 CDS Spro_3599 NC_009832.1 3978025 3979332 R PFAM: major facilitator superfamily MFS_1; KEGG: ypi:YpsIP31758_0926 putative hexuronate transporter; major facilitator transporter complement(3978025..3979332) Serratia proteamaculans 568 5605816 YP_001479824.1 CDS Spro_3600 NC_009832.1 3979698 3980780 D PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: ypi:YpsIP31758_0927 sugar-binding transcriptional regulator, LacI family; LacI family transcription regulator 3979698..3980780 Serratia proteamaculans 568 5605817 YP_001479825.1 CDS Spro_3601 NC_009832.1 3980822 3981847 D PFAM: peptidase M4 thermolysin; Peptidase M4 thermolysin; KEGG: eca:ECA3211 extracellular metalloprotease; peptidase M4 thermolysin 3980822..3981847 Serratia proteamaculans 568 5605848 YP_001479826.1 CDS Spro_3602 NC_009832.1 3981847 3982188 D KEGG: eca:ECA3212 hypothetical protein; hypothetical protein 3981847..3982188 Serratia proteamaculans 568 5605849 YP_001479827.1 CDS Spro_3603 NC_009832.1 3982193 3982414 R PFAM: protein of unknown function DUF1407; KEGG: yen:YE1079 hypothetical protein; hypothetical protein complement(3982193..3982414) Serratia proteamaculans 568 5605850 YP_001479828.1 CDS Spro_3604 NC_009832.1 3982428 3983384 R PFAM: Auxin Efflux Carrier; KEGG: yen:YE1078 hypothetical protein; auxin efflux carrier complement(3982428..3983384) Serratia proteamaculans 568 5605854 YP_001479829.1 CDS engA NC_009832.1 3983487 3984971 R EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA complement(3983487..3984971) Serratia proteamaculans 568 5605855 YP_001479830.1 CDS Spro_3606 NC_009832.1 3985102 3986283 R with YaeT, YfiO, and NlpB forms a complex involved in outer membrane protein biogenesis; outer membrane protein assembly complex subunit YfgL complement(3985102..3986283) Serratia proteamaculans 568 5605856 YP_001479831.1 CDS Spro_3607 NC_009832.1 3986295 3986915 R KEGG: yen:YE1075 hypothetical protein; hypothetical protein complement(3986295..3986915) Serratia proteamaculans 568 5605857 YP_001479832.1 CDS hisS NC_009832.1 3986929 3988203 R catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase complement(3986929..3988203) Serratia proteamaculans 568 5605858 YP_001479833.1 CDS ispG NC_009832.1 3988342 3989463 R catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase complement(3988342..3989463) Serratia proteamaculans 568 5605859 YP_001479834.1 CDS Spro_3610 NC_009832.1 3989511 3990482 R PFAM: helix-turn-helix domain protein; KEGG: ecv:APECO1_4008 hypothetical protein; cytoskeletal protein RodZ complement(3989511..3990482) Serratia proteamaculans 568 5605863 YP_001479835.1 CDS Spro_3611 NC_009832.1 3990472 3991263 R KEGG: yen:YE1071 putative fimbrial biogenesis protein; TIGRFAM: type IV pilus biogenesis/stability protein PilW; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; type IV pilus biogenesis/stability protein PilW complement(3990472..3991263) Serratia proteamaculans 568 5605864 YP_001479836.1 CDS Spro_3612 NC_009832.1 3991309 3992505 R 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N complement(3991309..3992505) Serratia proteamaculans 568 5605865 YP_001479837.1 CDS ndk NC_009832.1 3992804 3993229 R catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase complement(3992804..3993229) Serratia proteamaculans 568 5605889 YP_001479838.1 CDS Spro_3614 NC_009832.1 3993411 3995735 R penicillin-insensitive transglycosylase/transpeptidase; penicillin-binding protein 1C complement(3993411..3995735) Serratia proteamaculans 568 5605890 YP_001479839.1 CDS Spro_3615 NC_009832.1 3995797 4000788 R PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; KEGG: yen:YE1066 hypothetical protein; alpha-2-macroglobulin domain-containing protein complement(3995797..4000788) Serratia proteamaculans 568 5605891 YP_001479840.1 CDS Spro_3616 NC_009832.1 4000940 4001977 D PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: ypi:YpsIP31758_1855 sugar-binding transcriptional regulator, LacI family; LacI family transcription regulator 4000940..4001977 Serratia proteamaculans 568 5605926 YP_001479841.1 CDS Spro_3617 NC_009832.1 4002101 4003540 D PFAM: Na+/H+ antiporter NhaC; KEGG: ypi:YpsIP31758_1856 Na+/H+ antiporter NhaC; Na+/H+ antiporter NhaC 4002101..4003540 Serratia proteamaculans 568 5605927 YP_001479842.1 CDS Spro_3618 NC_009832.1 4003542 4004720 D PFAM: aminotransferase class I and II; KEGG: ypi:YpsIP31758_1857 aminotransferase, classes I and II; class I and II aminotransferase 4003542..4004720 Serratia proteamaculans 568 5605928 YP_001479843.1 CDS Spro_3619 NC_009832.1 4005300 4006130 R enhances serine sensitivity caused by inhibition of homoserine dehydrogenase I; enhanced serine sensitivity protein SseB complement(4005300..4006130) Serratia proteamaculans 568 5605943 YP_001479844.1 CDS Spro_3620 NC_009832.1 4006419 4007714 R catalyzes the removal of an N-terminal amino acid from a peptide or arylamide; aminopeptidase B complement(4006419..4007714) Serratia proteamaculans 568 5605944 YP_001479845.1 CDS Spro_3621 NC_009832.1 4007953 4008153 R PFAM: protein of unknown function DUF528; KEGG: ecp:ECP_2529 hypothetical protein YfhJ; hypothetical protein complement(4007953..4008153) Serratia proteamaculans 568 5605945 YP_001479846.1 CDS Spro_3622 NC_009832.1 4008167 4008502 R TIGRFAM: ferredoxin, 2Fe-2S type, ISC system; PFAM: ferredoxin; KEGG: plu:plu3278 ferredoxin, 2Fe-2S; ferredoxin, 2Fe-2S type, ISC system complement(4008167..4008502) Serratia proteamaculans 568 5605946 YP_001479847.1 CDS hscA NC_009832.1 4008505 4010355 R involved in the maturation of iron-sulfur cluster-containing proteins; chaperone protein HscA complement(4008505..4010355) Serratia proteamaculans 568 5605947 YP_001479848.1 CDS hscB NC_009832.1 4010383 4010904 R J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone; may function in biogenesis of iron-sulfur proteins; co-chaperone HscB complement(4010383..4010904) Serratia proteamaculans 568 5605948 YP_001479849.1 CDS iscA NC_009832.1 4010968 4011291 R forms iron-sulfur clusters of ferredoxin [2FE-2S]; binds iron in the presence of the thioredoxin reductase system; forms homodimers and tetramers; similar to SufA protein; iron-sulfur cluster assembly protein complement(4010968..4011291) Serratia proteamaculans 568 5606010 YP_001479850.1 CDS Spro_3626 NC_009832.1 4011347 4011733 R TIGRFAM: FeS cluster assembly scaffold IscU; PFAM: nitrogen-fixing NifU domain protein; KEGG: ypi:YpsIP31758_1169 FeS cluster assembly scaffold IscU; scaffold protein complement(4011347..4011733) Serratia proteamaculans 568 5606011 YP_001479851.1 CDS Spro_3627 NC_009832.1 4011758 4012972 R catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis; cysteine desulfurase complement(4011758..4012972) Serratia proteamaculans 568 5606012 YP_001479852.1 CDS Spro_3628 NC_009832.1 4013027 4013521 R regulates the expression of the iscRSUA operon; DNA-binding transcriptional regulator IscR complement(4013027..4013521) Serratia proteamaculans 568 5606030 YP_001479853.1 CDS Spro_3629 NC_009832.1 4013716 4014450 R TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: ypi:YpsIP31758_1166 RNA methyltransferase, TrmH family, group 1; RNA methyltransferase complement(4013716..4014450) Serratia proteamaculans 568 5606031 YP_001479854.1 CDS Spro_3630 NC_009832.1 4014570 4015373 D PFAM: inositol monophosphatase; KEGG: ypi:YpsIP31758_1165 inositol-1-monophosphatase; inositol monophosphatase 4014570..4015373 Serratia proteamaculans 568 5606032 YP_001479855.1 CDS Spro_3631 NC_009832.1 4015438 4016460 R PFAM: high-affinity nickel-transporter; KEGG: yen:YE1052 hypothetical protein; high-affinity nickel-transporter complement(4015438..4016460) Serratia proteamaculans 568 5606050 YP_001479856.1 CDS Spro_3632 NC_009832.1 4016451 4017119 R PFAM: protein of unknown function DUF1007; KEGG: yen:YE1051 hypothetical protein; hypothetical protein complement(4016451..4017119) Serratia proteamaculans 568 5606051 YP_001479857.1 CDS Spro_3633 NC_009832.1 4017264 4018529 D PFAM: PRD domain protein; KEGG: ypa:YPA_2343 putative RNA-binding protein; stationary phase inducible protein CsiE 4017264..4018529 Serratia proteamaculans 568 5606052 YP_001479858.1 CDS Spro_3634 NC_009832.1 4018526 4019677 R putative transporter of 3-phenylpropionate across the inner membrane; member of the major facilitator superfamily of transporters; putative 3-phenylpropionic acid transporter complement(4018526..4019677) Serratia proteamaculans 568 5606056 YP_001479859.1 CDS Spro_3635 NC_009832.1 4019832 4020260 R TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; KEGG: amt:Amet_3027 cytidine deaminase; cytidine deaminase complement(4019832..4020260) Serratia proteamaculans 568 5606057 YP_001479860.1 CDS Spro_3636 NC_009832.1 4020262 4021005 R PFAM: protein of unknown function DUF1355; KEGG: stm:STM1381 putative cytoplasmic protein; hypothetical protein complement(4020262..4021005) Serratia proteamaculans 568 5606058 YP_001479861.1 CDS Spro_3637 NC_009832.1 4021081 4022265 R PFAM: Na+ dependent nucleoside transporter; nucleoside recognition domain protein; Na+ dependent nucleoside transporter domain protein; KEGG: ent:Ent638_2927 nucleoside transporter; Na+ dependent nucleoside transporter complement(4021081..4022265) Serratia proteamaculans 568 5606082 YP_001479862.1 CDS glyA NC_009832.1 4022546 4023799 R catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase complement(4022546..4023799) Serratia proteamaculans 568 5606083 YP_001479863.1 CDS Spro_3639 NC_009832.1 4024172 4025362 D flavohemoprotein; catalyzes the formation of nitrate from nitric oxide; can also catalyze the reduction of dihydropteridine; nitric oxide dioxygenase 4024172..4025362 Serratia proteamaculans 568 5606084 YP_001479864.1 CDS Spro_3640 NC_009832.1 4025527 4026714 R PFAM: cytochrome c class I; KEGG: asa:ASA_2963 cytochrome c, class I; gluconate 2-dehydrogenase complement(4025527..4026714) Serratia proteamaculans 568 5606100 YP_001479865.1 CDS Spro_3641 NC_009832.1 4026711 4028621 R KEGG: aha:AHA_2947 twin-arginine translocation pathway signal; twin-arginine translocation pathway signal complement(4026711..4028621) Serratia proteamaculans 568 5606101 YP_001479866.1 CDS Spro_3642 NC_009832.1 4028844 4030268 R catalyzes the formation of 4-aminobutanoate from 4-aminobutanal; involved in putrescine degradation; gamma-aminobutyraldehyde dehydrogenase complement(4028844..4030268) Serratia proteamaculans 568 5606102 YP_001479867.1 CDS Spro_3643 NC_009832.1 4030320 4031126 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfo:Pfl_1045 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component complement(4030320..4031126) Serratia proteamaculans 568 5606115 YP_001479868.1 CDS Spro_3644 NC_009832.1 4031116 4032060 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN1240 ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component complement(4031116..4032060) Serratia proteamaculans 568 5606116 YP_001479869.1 CDS Spro_3645 NC_009832.1 4032062 4033090 R KEGG: pfo:Pfl_1047 spermidine/putrescine ABC transporter ATP-binding subunit; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; spermidine/putrescine ABC transporter ATPase complement(4032062..4033090) Serratia proteamaculans 568 5606117 YP_001479870.1 CDS Spro_3646 NC_009832.1 4033145 4034299 R PFAM: extracellular solute-binding protein family 1; KEGG: ssn:SSON_1697 putative transport protein; extracellular solute-binding protein complement(4033145..4034299) Serratia proteamaculans 568 5606145 YP_001479871.1 CDS Spro_3647 NC_009832.1 4034362 4035825 R catalyzes the formation of 4-aminobutanoate from 4-aminobutanal; involved in putrescine degradation; gamma-aminobutyraldehyde dehydrogenase complement(4034362..4035825) Serratia proteamaculans 568 5606146 YP_001479872.1 CDS Spro_3648 NC_009832.1 4035941 4036864 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfo:Pfl_1050 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(4035941..4036864) Serratia proteamaculans 568 5606147 YP_001479873.1 CDS Spro_3649 NC_009832.1 4037086 4037424 R indirectly regulates nitrogen metabolism; at high nitrogen levels P-II prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA); at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA; nitrogen regulatory protein P-II 1 complement(4037086..4037424) Serratia proteamaculans 568 5606192 YP_001479874.1 CDS Spro_3650 NC_009832.1 4037435 4039057 R NH(3)-dependent; catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase complement(4037435..4039057) Serratia proteamaculans 568 5606193 YP_001479875.1 CDS Spro_3651 NC_009832.1 4039187 4040524 R PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; SMART: AAA ATPase; KEGG: yen:YE1037 two-component system response regulator; two component sigma54 specific Fis family transcriptional regulator complement(4039187..4040524) Serratia proteamaculans 568 5606194 YP_001479876.1 CDS Spro_3652 NC_009832.1 4040521 4041393 R KEGG: ypp:YPDSF_2259 lipoprotein; hypothetical protein complement(4040521..4041393) Serratia proteamaculans 568 5606210 YP_001479877.1 CDS Spro_3653 NC_009832.1 4041396 4042832 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: ypi:YpsIP31758_1150 putative sensor-like histidine kinase YfhK; integral membrane sensor signal transduction histidine kinase complement(4041396..4042832) Serratia proteamaculans 568 5606211 YP_001479878.1 CDS Spro_3654 NC_009832.1 4043632 4047522 R catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase complement(4043632..4047522) Serratia proteamaculans 568 5606212 YP_001479879.1 CDS Spro_3655 NC_009832.1 4047781 4049262 D YfhD; uncharacterized member of the transglycosylase slt family; part of the rob operon, which plays a role in cellular resistance to antibiotics, bactericidal agents, and organic solvents; unknown function; putative transglycosylase 4047781..4049262 Serratia proteamaculans 568 5606289 YP_001479880.1 CDS Spro_3656 NC_009832.1 4049263 4049775 R PFAM: CMP/dCMP deaminase zinc-binding; KEGG: ypi:YpsIP31758_1145 tRNA-specific adenosine deaminase; zinc-binding CMP/dCMP deaminase complement(4049263..4049775) Serratia proteamaculans 568 5606290 YP_001479881.1 CDS Spro_3657 NC_009832.1 4049959 4051011 D KEGG: yen:YE1029 putative integral membrane protein; putative integral membrane protein 4049959..4051011 Serratia proteamaculans 568 5606291 YP_001479882.1 CDS Spro_3658 NC_009832.1 4051159 4052310 D PFAM: iron-containing alcohol dehydrogenase; KEGG: ent:Ent638_0142 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 4051159..4052310 Serratia proteamaculans 568 5606307 YP_001479883.1 CDS Spro_3659 NC_009832.1 4052498 4053154 R TIGRFAM: HAD superfamily (subfamily IF) hydrolase, YfhB; KEGG: ypi:YpsIP31758_1144 HAD hydrolase YfhB; hypothetical protein complement(4052498..4053154) Serratia proteamaculans 568 5606308 YP_001479884.1 CDS Spro_3660 NC_009832.1 4053158 4054525 R PFAM: phosphotransferase system PTS EIIB protein; phosphotransferase system EIIC; KEGG: ent:Ent638_3046 phosphotransferase system, EIIC; phosphotransferase system EIIC complement(4053158..4054525) Serratia proteamaculans 568 5606309 YP_001479885.1 CDS murQ NC_009832.1 4054545 4055438 R catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway; N-acetylmuramic acid-6-phosphate etherase complement(4054545..4055438) Serratia proteamaculans 568 5606380 YP_001479886.1 CDS Spro_3662 NC_009832.1 4055613 4056461 D PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: yen:YE1025 putative RpiR-family transcriptional regulatory protein; putative DNA-binding transcriptional regulator 4055613..4056461 Serratia proteamaculans 568 5606381 YP_001479887.1 CDS Spro_3663 NC_009832.1 4056597 4058135 D PFAM: sulfatase; KEGG: asu:Asuc_1041 sulfatase; sulfatase 4056597..4058135 Serratia proteamaculans 568 5606382 YP_001479888.1 CDS Spro_3664 NC_009832.1 4058244 4058504 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ecv:APECO1_3969 putative 4Fe-4S cluster-containing protein; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 4058244..4058504 Serratia proteamaculans 568 5606403 YP_001479889.1 CDS acpS NC_009832.1 4058569 4058949 R Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase complement(4058569..4058949) Serratia proteamaculans 568 5606404 YP_001479890.1 CDS Spro_3666 NC_009832.1 4058949 4059680 R involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase complement(4058949..4059680) Serratia proteamaculans 568 5606405 YP_001479891.1 CDS recO NC_009832.1 4059754 4060485 R involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO complement(4059754..4060485) Serratia proteamaculans 568 5606412 YP_001479892.1 CDS era NC_009832.1 4060494 4061402 R Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era complement(4060494..4061402) Serratia proteamaculans 568 5606413 YP_001479893.1 CDS rnc NC_009832.1 4061399 4062079 R cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III complement(4061399..4062079) Serratia proteamaculans 568 5606414 YP_001479894.1 CDS Spro_3670 NC_009832.1 4062262 4063239 R catalyzes the cleavage of the amino-terminal leader peptide from secretory proteins; signal peptidase I complement(4062262..4063239) Serratia proteamaculans 568 5606479 YP_001479895.1 CDS Spro_3671 NC_009832.1 4063276 4065072 R binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA complement(4063276..4065072) Serratia proteamaculans 568 5606480 YP_001479896.1 CDS Spro_3672 NC_009832.1 4065615 4066454 D KEGG: yen:YE1014 hypothetical protein; hypothetical protein 4065615..4066454 Serratia proteamaculans 568 5606481 YP_001479897.1 CDS Spro_3673 NC_009832.1 4066451 4066924 R involved in the reduction of the SoxR iron-sulfur cluster; SoxR reducing system protein RseC complement(4066451..4066924) Serratia proteamaculans 568 5606493 YP_001479898.1 CDS rseB NC_009832.1 4066924 4067883 R periplasmic protein; interacts with the C-terminal domain of RseA and stimulates RseA binding to sigmaE via the cytoplasmic RseA N-terminal domain which then sequesters sigmaE in the membrane thereby preventing sigmaE associated with core RNAP; periplasmic negative regulator of sigmaE complement(4066924..4067883) Serratia proteamaculans 568 5606494 YP_001479899.1 CDS Spro_3675 NC_009832.1 4067883 4068536 R PFAM: Anti sigma-E protein RseA family protein; Anti sigma-E protein RseA domain protein; KEGG: ypi:YpsIP31758_1130 sigma E factor negative regulatory protein; anti-RNA polymerase sigma factor SigE complement(4067883..4068536) Serratia proteamaculans 568 5606495 YP_001479900.1 CDS Spro_3676 NC_009832.1 4068567 4069142 R Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; RNA polymerase sigma factor RpoE complement(4068567..4069142) Serratia proteamaculans 568 5606708 YP_001479901.1 CDS Spro_3677 NC_009832.1 4069320 4070957 D catalyzes the formation of oxaloacetate from L-aspartate; L-aspartate oxidase 4069320..4070957 Serratia proteamaculans 568 5606709 YP_001479902.1 CDS Spro_3678 NC_009832.1 4070998 4071780 R PFAM: methyltransferase small; KEGG: yps:YPTB2899 hypothetical protein; methyltransferase small complement(4070998..4071780) Serratia proteamaculans 568 5606710 YP_001479903.1 CDS Spro_3679 NC_009832.1 4071880 4073205 D facilitates an early step in the assembly of the 50S subunit of the ribosome; ATP-dependent RNA helicase SrmB 4071880..4073205 Serratia proteamaculans 568 5606711 YP_001479904.1 CDS Spro_3680 NC_009832.1 4073266 4074021 R PFAM: Ankyrin; KEGG: yen:YE1006 putative phospholipase A accessory protein; ankyrin complement(4073266..4074021) Serratia proteamaculans 568 5606712 YP_001479905.1 CDS Spro_3681 NC_009832.1 4074014 4074976 R KEGG: yen:YE1005 phospholipase A; phospholipase A(1) complement(4074014..4074976) Serratia proteamaculans 568 5606713 YP_001479906.1 CDS Spro_3682 NC_009832.1 4075163 4075546 R stress-induced glycyl radical protein that can replace an oxidatively damaged pyruvate formate-lyase subunit; autonomous glycyl radical cofactor GrcA complement(4075163..4075546) Serratia proteamaculans 568 5606928 YP_001479907.1 CDS Spro_3683 NC_009832.1 4075891 4076574 D Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 4075891..4076574 Serratia proteamaculans 568 5606929 YP_001479908.1 CDS Spro_3684 NC_009832.1 4076625 4077197 R with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE complement(4076625..4077197) Serratia proteamaculans 568 5606930 YP_001479909.1 CDS ppnK NC_009832.1 4077322 4078200 D catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase 4077322..4078200 Serratia proteamaculans 568 5606970 YP_001479910.1 CDS Spro_3686 NC_009832.1 4078287 4079948 D TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: ypi:YpsIP31758_2889 DNA repair protein RecN; recombination and repair protein 4078287..4079948 Serratia proteamaculans 568 5606971 YP_001479911.1 CDS Spro_3687 NC_009832.1 4080062 4080400 D PFAM: SmpA/OmlA domain protein; KEGG: stm:STM2685 small membrane protein A; hypothetical protein 4080062..4080400 Serratia proteamaculans 568 5606972 YP_001479912.1 CDS Spro_3688 NC_009832.1 4080515 4080799 R PFAM: protein of unknown function UPF0125; KEGG: ypi:YpsIP31758_2891 hypothetical protein; hypothetical protein complement(4080515..4080799) Serratia proteamaculans 568 5606973 YP_001479913.1 CDS Spro_3689 NC_009832.1 4080792 4081226 R PFAM: cyclase/dehydrase; KEGG: yen:YE0995 hypothetical protein; hypothetical protein complement(4080792..4081226) Serratia proteamaculans 568 5606974 YP_001479914.1 CDS Spro_3690 NC_009832.1 4081388 4081870 D TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; KEGG: yen:YE0994 SsrA-binding protein (small protein B); SsrA-binding protein 4081388..4081870 Serratia proteamaculans 568 5606975 YP_001479915.1 CDS Spro_3691 NC_009832.1 4082726 4084075 D PFAM: HipA domain protein; KEGG: vvy:VV0798 hypothetical protein; HipA domain-containing protein 4082726..4084075 Serratia proteamaculans 568 5602794 YP_001479916.1 CDS Spro_3692 NC_009832.1 4084072 4084530 D KEGG: vco:VC0395_A0339 putative transcriptional regulator; putative transcriptional regulator 4084072..4084530 Serratia proteamaculans 568 5606977 YP_001479917.1 CDS Spro_3693 NC_009832.1 4084620 4085756 R PFAM: secretion protein HlyD family protein; KEGG: ent:Ent638_0138 secretion protein HlyD family protein; secretion protein HlyD family protein complement(4084620..4085756) Serratia proteamaculans 568 5606978 YP_001479918.1 CDS Spro_3694 NC_009832.1 4085766 4086113 R KEGG: ecs:ECs4463 hypothetical protein; hypothetical protein complement(4085766..4086113) Serratia proteamaculans 568 5606992 YP_001479919.1 CDS Spro_3695 NC_009832.1 4086153 4086806 R KEGG: ecv:APECO1_577 hypothetical protein; hypothetical protein complement(4086153..4086806) Serratia proteamaculans 568 5606993 YP_001479920.1 CDS Spro_3696 NC_009832.1 4086932 4087879 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ent:Ent638_0144 transcriptional regulator, LysR family; LysR family transcriptional regulator 4086932..4087879 Serratia proteamaculans 568 5606994 YP_001479921.1 CDS Spro_3697 NC_009832.1 4088081 4088461 D KEGG: ent:Ent638_3560 VirG-like protein; hypothetical protein 4088081..4088461 Serratia proteamaculans 568 5607017 YP_001479922.1 CDS Spro_3698 NC_009832.1 4088622 4089302 D KEGG: kpn:KPN_03581 hypothetical protein; CRP/FNR family transcriptional regulator 4088622..4089302 Serratia proteamaculans 568 5607018 YP_001479923.1 CDS Spro_3699 NC_009832.1 4089542 4090714 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: ypi:YpsIP31758_3067 acriflavine resistance protein A; RND family efflux transporter MFP subunit 4089542..4090714 Serratia proteamaculans 568 5607019 YP_001479924.1 CDS Spro_3700 NC_009832.1 4090728 4093829 D TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: stm:STM0475 RND family, acridine efflux pump; hydrophobe/amphiphile efflux-1 (HAE1) family protein 4090728..4093829 Serratia proteamaculans 568 5607026 YP_001479925.1 CDS Spro_3701 NC_009832.1 4093881 4094633 D PFAM: MltA-interacting MipA family protein; KEGG: ypi:YpsIP31758_1990 MltA-interacting protein; MltA-interacting MipA family protein 4093881..4094633 Serratia proteamaculans 568 5607027 YP_001479926.1 CDS Spro_3702 NC_009832.1 4094834 4096081 D KEGG: bch:Bcen2424_3890 hypothetical protein; hypothetical protein 4094834..4096081 Serratia proteamaculans 568 5607028 YP_001479927.1 CDS Spro_3703 NC_009832.1 4096121 4096573 R PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA1768 putative acetyltransferase; GCN5-like N-acetyltransferase complement(4096121..4096573) Serratia proteamaculans 568 5607065 YP_001479928.1 CDS Spro_3704 NC_009832.1 4096736 4097470 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: yen:YE1959 hypothetical protein; type 11 methyltransferase 4096736..4097470 Serratia proteamaculans 568 5607066 YP_001479929.1 CDS Spro_3705 NC_009832.1 4097551 4097829 R KEGG: ent:Ent638_3304 hypothetical protein; hypothetical protein complement(4097551..4097829) Serratia proteamaculans 568 5607067 YP_001479930.1 CDS Spro_3706 NC_009832.1 4097947 4098360 D PFAM: DoxX family protein; KEGG: bxe:Bxe_B1209 hypothetical protein; DoxX family protein 4097947..4098360 Serratia proteamaculans 568 5607183 YP_001479931.1 CDS Spro_3707 NC_009832.1 4098411 4098983 R PFAM: Smr protein/MutS2; KEGG: stm:STM1658 hypothetical protein; Smr protein/MutS2 complement(4098411..4098983) Serratia proteamaculans 568 5607184 YP_001479932.1 CDS Spro_3708 NC_009832.1 4099156 4099494 D KEGG: yen:YE0939 hypothetical protein; hypothetical protein 4099156..4099494 Serratia proteamaculans 568 5607185 YP_001479933.1 CDS Spro_3709 NC_009832.1 4099561 4100007 D KEGG: ypi:YpsIP31758_1068 hypothetical protein; hypothetical protein 4099561..4100007 Serratia proteamaculans 568 5607258 YP_001479934.1 CDS Spro_3710 NC_009832.1 4100037 4100375 R KEGG: yen:YE0937 hypothetical protein; hypothetical protein complement(4100037..4100375) Serratia proteamaculans 568 5607259 YP_001479935.1 CDS Spro_3711 NC_009832.1 4100478 4101713 R PFAM: major facilitator superfamily MFS_1; KEGG: ecj:JW5945 predicted transporter; major facilitator transporter complement(4100478..4101713) Serratia proteamaculans 568 5607260 YP_001479936.1 CDS Spro_3712 NC_009832.1 4101763 4102776 R PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: yen:YE0935 AraC-family transcriptional regulator; AraC family transcriptional regulator complement(4101763..4102776) Serratia proteamaculans 568 5607313 YP_001479937.1 CDS Spro_3713 NC_009832.1 4102906 4103946 D KEGG: yen:YE0934 hypothetical protein; hypothetical protein 4102906..4103946 Serratia proteamaculans 568 5607314 YP_001479938.1 CDS Spro_3714 NC_009832.1 4103906 4104802 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ent:Ent638_1086 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(4103906..4104802) Serratia proteamaculans 568 5607315 YP_001479939.1 CDS Spro_3715 NC_009832.1 4104909 4106288 D PFAM: major facilitator superfamily MFS_1; KEGG: ent:Ent638_1087 major facilitator superfamily MFS_1; major facilitator transporter 4104909..4106288 Serratia proteamaculans 568 5607316 YP_001479940.1 CDS Spro_3716 NC_009832.1 4106288 4106668 D KEGG: stm:STM2910 putative cytoplasmic protein; putative cytoplasmic protein 4106288..4106668 Serratia proteamaculans 568 5607317 YP_001479941.1 CDS Spro_3717 NC_009832.1 4106852 4107268 R required for growth and survival under moderately acid conditions; acid shock protein complement(4106852..4107268) Serratia proteamaculans 568 5607318 YP_001479942.1 CDS Spro_3718 NC_009832.1 4107488 4107796 D PFAM: protein of unknown function DUF883 ElaB; KEGG: yen:YE0932 putative inner membrane protein; hypothetical protein 4107488..4107796 Serratia proteamaculans 568 5607331 YP_001479943.1 CDS Spro_3719 NC_009832.1 4107860 4109290 R PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: yen:YE0931 putative GntR-family transcriptional regulatory protein; transcriptional regulator complement(4107860..4109290) Serratia proteamaculans 568 5607332 YP_001479944.1 CDS Spro_3720 NC_009832.1 4109513 4109944 D TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: yen:YE0930 hypothetical protein; alkylhydroperoxidase 4109513..4109944 Serratia proteamaculans 568 5607333 YP_001479945.1 CDS Spro_3721 NC_009832.1 4110226 4110462 D TIGRFAM: glutaredoxin-like protein NrdH; PFAM: glutaredoxin; KEGG: ypi:YpsIP31758_1065 glutaredoxin-related protein NrdH; glutaredoxin-like protein NrdH 4110226..4110462 Serratia proteamaculans 568 5607354 YP_001479946.1 CDS nrdI NC_009832.1 4110471 4110875 D in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF; ribonucleotide reductase stimulatory protein 4110471..4110875 Serratia proteamaculans 568 5607355 YP_001479947.1 CDS Spro_3723 NC_009832.1 4110857 4113001 D Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 4110857..4113001 Serratia proteamaculans 568 5607356 YP_001479948.1 CDS nrdF NC_009832.1 4113010 4113981 D B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE; ribonucleotide-diphosphate reductase subunit beta 4113010..4113981 Serratia proteamaculans 568 5607389 YP_001479949.1 CDS Spro_3725 NC_009832.1 4114059 4114295 R KEGG: azo:azo3076 conserved hypothetical protein; hypothetical protein complement(4114059..4114295) Serratia proteamaculans 568 5607390 YP_001479950.1 CDS Spro_3726 NC_009832.1 4114345 4114560 R PFAM: protein of unknown function DUF1289; KEGG: pol:Bpro_4154 YbaK/prolyl-tRNA synthetase associated region; hypothetical protein complement(4114345..4114560) Serratia proteamaculans 568 5607391 YP_001479951.1 CDS Spro_3727 NC_009832.1 4114633 4115373 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: xau:Xaut_1016 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(4114633..4115373) Serratia proteamaculans 568 5607407 YP_001479952.1 CDS Spro_3728 NC_009832.1 4115497 4116390 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rle:RL3780 putative LysR family transcriptional regulator; LysR family transcriptional regulator 4115497..4116390 Serratia proteamaculans 568 5607408 YP_001479953.1 CDS Spro_3729 NC_009832.1 4116596 4117540 R PFAM: beta-lactamase domain protein; KEGG: mpt:Mpe_A1376 methyl parathion hydrolase; beta-lactamase domain-containing protein complement(4116596..4117540) Serratia proteamaculans 568 5607409 YP_001479954.1 CDS Spro_3730 NC_009832.1 4117675 4119030 R PFAM: Citrate carrier protein; KEGG: eca:ECA2576 citrate/acetate antiporter; citrate carrier protein complement(4117675..4119030) Serratia proteamaculans 568 5607415 YP_001479955.1 CDS Spro_3731 NC_009832.1 4119357 4120955 D PFAM: ATP-binding region ATPase domain protein; SMART: PAS domain containing protein; KEGG: eca:ECA2577 two-component sensor kinase; signal transduction histidine kinase regulating citrate/malate metabolism 4119357..4120955 Serratia proteamaculans 568 5607416 YP_001479956.1 CDS Spro_3732 NC_009832.1 4120974 4121663 D PFAM: response regulator receiver; KEGG: eca:ECA2578 two-component response regulator; response regulator receiver/unknown domain-containing protein 4120974..4121663 Serratia proteamaculans 568 5607417 YP_001479957.1 CDS Spro_3733 NC_009832.1 4122070 4123272 D KEGG: yen:YE0925 glycine betaine/L-proline transport ATP-binding protein; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: CBS domain containing protein; ABC transporter related; SMART: AAA ATPase; glycine betaine/L-proline ABC transporter ATPase 4122070..4123272 Serratia proteamaculans 568 5607418 YP_001479958.1 CDS Spro_3734 NC_009832.1 4123265 4124389 D with ProVX is involved in the high-affinity uptake of glycine betaine; glycine betaine transporter membrane protein 4123265..4124389 Serratia proteamaculans 568 5607419 YP_001479959.1 CDS proX NC_009832.1 4124443 4125438 D with ProVW, part of the high-affinity transport system for the osmoprotectant glycine betaine; glycine betaine transporter periplasmic subunit 4124443..4125438 Serratia proteamaculans 568 5607420 YP_001479960.1 CDS proX NC_009832.1 4125490 4126491 D with ProVW, part of the high-affinity transport system for the osmoprotectant glycine betaine; glycine betaine transporter periplasmic subunit 4125490..4126491 Serratia proteamaculans 568 5607427 YP_001479961.1 CDS Spro_3737 NC_009832.1 4126531 4127409 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN1556 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(4126531..4127409) Serratia proteamaculans 568 5607428 YP_001479962.1 CDS Spro_3738 NC_009832.1 4127514 4128713 D PFAM: major facilitator superfamily MFS_1; KEGG: ypn:YPN_0833 sugar transporter; major facilitator transporter 4127514..4128713 Serratia proteamaculans 568 5607429 YP_001479963.1 CDS Spro_3739 NC_009832.1 4128834 4129580 D PFAM: AzlC family protein; KEGG: ypi:YpsIP31758_3198 putative azaleucine resistance protein AzlC; AzlC family protein 4128834..4129580 Serratia proteamaculans 568 5603611 YP_001479964.1 CDS Spro_3740 NC_009832.1 4129570 4129923 D KEGG: yen:YE3239 hypothetical protein; hypothetical protein 4129570..4129923 Serratia proteamaculans 568 5603612 YP_001479965.1 CDS Spro_3741 NC_009832.1 4130083 4130604 D DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux; negative regulator of the multidrug operon emrAB; transcriptional repressor MprA 4130083..4130604 Serratia proteamaculans 568 5603613 YP_001479966.1 CDS Spro_3742 NC_009832.1 4130626 4132077 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: yen:YE3241 probable outer membrane efflux protein; RND efflux system outer membrane lipoprotein 4130626..4132077 Serratia proteamaculans 568 5602845 YP_001479967.1 CDS Spro_3743 NC_009832.1 4132103 4133275 D TIGRFAM: efflux pump membrane protein; PFAM: secretion protein HlyD family protein; KEGG: yen:YE3242 multidrug resistance protein A; efflux pump membrane protein 4132103..4133275 Serratia proteamaculans 568 5602846 YP_001479968.1 CDS Spro_3744 NC_009832.1 4133293 4134828 D TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: ypi:YpsIP31758_3202 multidrug resistance protein B; EmrB/QacA family drug resistance transporter 4133293..4134828 Serratia proteamaculans 568 5602847 YP_001479969.1 CDS Spro_3745 NC_009832.1 4135012 4136112 R PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: yen:YE3244 putative tRNA/rRNA methyltransferase; putative methyltransferase complement(4135012..4136112) Serratia proteamaculans 568 5602634 YP_001479970.1 CDS Spro_3746 NC_009832.1 4136321 4136740 D TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: ypi:YpsIP31758_3204 thioredoxin 2; thioredoxin 2 4136321..4136740 Serratia proteamaculans 568 5602635 YP_001479971.1 CDS Spro_3747 NC_009832.1 4136878 4137582 D PFAM: DTW domain containing protein; KEGG: yen:YE3246 hypothetical protein; DTW domain-containing protein 4136878..4137582 Serratia proteamaculans 568 5602636 YP_001479972.1 CDS Spro_3748 NC_009832.1 4137616 4140264 D PFAM: GCN5-related N-acetyltransferase; CoA-binding domain protein; KEGG: yps:YPTB0851 putative acyl-CoA synthetase, NAD(P)-binding, ATP-binding; GCN5-like N-acetyltransferase 4137616..4140264 Serratia proteamaculans 568 5603605 YP_001479973.1 CDS pssA NC_009832.1 4140418 4141773 D catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine; bounds to the ribosome; phosphatidylserine synthase 4140418..4141773 Serratia proteamaculans 568 5603606 YP_001479974.1 CDS Spro_3750 NC_009832.1 4141853 4142185 D KEGG: yen:YE3251 hypothetical protein; hypothetical protein 4141853..4142185 Serratia proteamaculans 568 5603607 YP_001479975.1 CDS Spro_3751 NC_009832.1 4142187 4143497 R TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: eca:ECA3522 alpha-ketoglutarate permease; alpha-ketoglutarate transporter complement(4142187..4143497) Serratia proteamaculans 568 5603580 YP_001479976.1 CDS Spro_3752 NC_009832.1 4149465 4150070 R Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate; D,D-heptose 1,7-bisphosphate phosphatase complement(4149465..4150070) Serratia proteamaculans 568 5603572 YP_001479977.1 CDS metN NC_009832.1 4150216 4151247 D part of the metNIQ transport system for methionine; DL-methionine transporter ATP-binding subunit 4150216..4151247 Serratia proteamaculans 568 5603582 YP_001479978.1 CDS Spro_3754 NC_009832.1 4151240 4151893 D part of the MetNIQ methionine uptake system; DL-methionine transporter permease 4151240..4151893 Serratia proteamaculans 568 5603223 YP_001479979.1 CDS metQ NC_009832.1 4151953 4152768 D TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: yen:YE3255 putative lipoprotein; DL-methionine transporter substrate-binding subunit 4151953..4152768 Serratia proteamaculans 568 5603224 YP_001479980.1 CDS rcsF NC_009832.1 4153035 4153439 D KEGG: ypi:YpsIP31758_1040 putative lipoprotein; outer membrane lipoprotein 4153035..4153439 Serratia proteamaculans 568 5603225 YP_001479981.1 CDS Spro_3757 NC_009832.1 4153436 4154143 D PFAM: protein of unknown function UPF0066; KEGG: yps:YPTB2977 hypothetical protein; hypothetical protein 4153436..4154143 Serratia proteamaculans 568 5603203 YP_001479982.1 CDS Spro_3758 NC_009832.1 4154267 4155985 D catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 4154267..4155985 Serratia proteamaculans 568 5603204 YP_001479983.1 CDS Spro_3759 NC_009832.1 4156037 4156720 R PFAM: copper resistance lipoprotein NlpE; KEGG: yen:YE3259 putative copper homeostasis lipoprotein; hypothetical protein complement(4156037..4156720) Serratia proteamaculans 568 5603205 YP_001479984.1 CDS Spro_3760 NC_009832.1 4156750 4157163 R PFAM: Class I peptide chain release factor; KEGG: yen:YE3260 hypothetical protein; peptidyl-tRNA hydrolase domain-containing protein complement(4156750..4157163) Serratia proteamaculans 568 5603160 YP_001479985.1 CDS Spro_3761 NC_009832.1 4157167 4157715 R PFAM: YaeQ family protein; KEGG: ypi:YpsIP31758_1035 hypothetical protein; YaeQ family protein complement(4157167..4157715) Serratia proteamaculans 568 5603161 YP_001479986.1 CDS Spro_3762 NC_009832.1 4157929 4158129 D PFAM: protein of unknown function UPF0253; KEGG: ypi:YpsIP31758_1034 hypothetical protein; hypothetical protein 4157929..4158129 Serratia proteamaculans 568 5603162 YP_001479987.1 CDS Spro_3763 NC_009832.1 4158116 4158379 D PFAM: Modulator of Rho-dependent transcription termination; KEGG: sbo:SBO_0177 hypothetical protein; transcriptional antiterminator, Rof 4158116..4158379 Serratia proteamaculans 568 5603194 YP_001479988.1 CDS Spro_3764 NC_009832.1 4158466 4158780 R PFAM: cytochrome c class I; KEGG: ypi:YpsIP31758_1032 cytochrome c family protein; cytochrome c class I complement(4158466..4158780) Serratia proteamaculans 568 5603195 YP_001479989.1 CDS tilS NC_009832.1 4158802 4160112 R Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU; ATP-dependent; responsible for modifying the wobble-base of the CAU anticodon of tRNAIle such that it exhibits proper recognition of the AUA codon rather than the AUG codon and is in turn properly recognized by isoleucyl-tRNA synthetase; tRNA(Ile)-lysidine synthetase complement(4158802..4160112) Serratia proteamaculans 568 5603196 YP_001479990.1 CDS Spro_3766 NC_009832.1 4160169 4161617 R KEGG: kpn:KPN_00501 putative di-/tripeptide transport protein (POT family); TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor type I/II extracellular region; major facilitator superfamily MFS_1; amino acid/peptide transporter complement(4160169..4161617) Serratia proteamaculans 568 5603151 YP_001479991.1 CDS Spro_3767 NC_009832.1 4161684 4163825 R PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: kpn:KPN_00500 lysine decarboxylase 1; lysine decarboxylase complement(4161684..4163825) Serratia proteamaculans 568 5603152 YP_001479992.1 CDS cadB NC_009832.1 4163917 4165266 R antiporter protein responsible for lysine import and cadaverine export; member of the lysine-dependent acid resistance system 4 (AR4); inner membrane protein; lysine/cadaverine antiporter complement(4163917..4165266) Serratia proteamaculans 568 5603153 YP_001479993.1 CDS Spro_3769 NC_009832.1 4165625 4167181 R regulates the cadBA operon; DNA-binding transcriptional activator CadC complement(4165625..4167181) Serratia proteamaculans 568 5603240 YP_001479994.1 CDS Spro_3770 NC_009832.1 4167270 4167671 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: yen:YE3266 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase complement(4167270..4167671) Serratia proteamaculans 568 5603241 YP_001479995.1 CDS Spro_3771 NC_009832.1 4167781 4168014 R KEGG: pap:PSPA7_4568 hypothetical protein; hypothetical protein complement(4167781..4168014) Serratia proteamaculans 568 5603242 YP_001479996.1 CDS Spro_3772 NC_009832.1 4168165 4168710 D PFAM: regulatory protein MarR; regulatory protein Crp; regulatory protein ArsR; KEGG: pau:PA14_52070 probable transcriptional regulator; MarR family transcriptional regulator 4168165..4168710 Serratia proteamaculans 568 5603214 YP_001479997.1 CDS Spro_3773 NC_009832.1 4168707 4170851 R PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: yen:YE3267 lysine decarboxylase, constitutive; lysine decarboxylase complement(4168707..4170851) Serratia proteamaculans 568 5603215 YP_001479998.1 CDS Spro_3774 NC_009832.1 4170990 4171949 R catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha complement(4170990..4171949) Serratia proteamaculans 568 5603216 YP_001479999.1 CDS dnaE NC_009832.1 4171962 4175450 R catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha complement(4171962..4175450) Serratia proteamaculans 568 5607351 YP_001480000.1 CDS rnhB NC_009832.1 4175520 4176113 R RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII complement(4175520..4176113) Serratia proteamaculans 568 5607352 YP_001480001.1 CDS lpxB NC_009832.1 4176110 4177258 R catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; lipid-A-disaccharide synthase complement(4176110..4177258) Serratia proteamaculans 568 5607353 YP_001480002.1 CDS Spro_3778 NC_009832.1 4177262 4178050 R catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase complement(4177262..4178050) Serratia proteamaculans 568 5607345 YP_001480003.1 CDS Spro_3779 NC_009832.1 4178054 4178584 R TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: eci:UTI89_C0195 (3R)-hydroxymyristol acyl carrier protein dehydratase; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ complement(4178054..4178584) Serratia proteamaculans 568 5607346 YP_001480004.1 CDS lpxD NC_009832.1 4178671 4179693 R adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase complement(4178671..4179693) Serratia proteamaculans 568 5607347 YP_001480005.1 CDS Spro_3781 NC_009832.1 4179698 4180228 R PFAM: outer membrane chaperone Skp (OmpH); KEGG: yps:YPTB2994 cationic 19 kDa outer membrane protein precursor; periplasmic chaperone complement(4179698..4180228) Serratia proteamaculans 568 5607328 YP_001480006.1 CDS Spro_3782 NC_009832.1 4180355 4182760 R part of a complex with YfgL, YfiO, and NlpB involved in outer membrane protein biosynthesis; involved in the assembly of outer membrane proteins; outer membrane protein assembly factor YaeT complement(4180355..4182760) Serratia proteamaculans 568 5607329 YP_001480007.1 CDS Spro_3783 NC_009832.1 4182796 4184151 R catalyzes the cleavage of RseA which activates the sigmaE-mediated stress response; zinc metallopeptidase RseP complement(4182796..4184151) Serratia proteamaculans 568 5607330 YP_001480008.1 CDS cdsA NC_009832.1 4184180 4185028 R catalyzes the synthesis of CDP-diglyceride from CTP and phosphatidate; CDP-diglyceride synthase complement(4184180..4185028) Serratia proteamaculans 568 5607295 YP_001480009.1 CDS Spro_3785 NC_009832.1 4185038 4185796 R KEGG: yen:YE3279 undecaprenyl pyrophosphate synthetase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; undecaprenyl diphosphate synthase complement(4185038..4185796) Serratia proteamaculans 568 5607296 YP_001480010.1 CDS Spro_3786 NC_009832.1 4186075 4187271 R catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase complement(4186075..4187271) Serratia proteamaculans 568 5607297 YP_001480011.1 CDS frr NC_009832.1 4187429 4187986 R Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor complement(4187429..4187986) Serratia proteamaculans 568 5607206 YP_001480012.1 CDS pyrH NC_009832.1 4188110 4188835 R Catalyzes the phosphorylation of UMP to UDP; uridylate kinase complement(4188110..4188835) Serratia proteamaculans 568 5607207 YP_001480013.1 CDS tsf NC_009832.1 4188984 4189835 R EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts complement(4188984..4189835) Serratia proteamaculans 568 5607208 YP_001480014.1 CDS rpsB NC_009832.1 4189964 4190689 R one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 complement(4189964..4190689) Serratia proteamaculans 568 5607189 YP_001480015.1 CDS Spro_3791 NC_009832.1 4191046 4191840 D catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase 4191046..4191840 Serratia proteamaculans 568 5607190 YP_001480016.1 CDS Spro_3792 NC_009832.1 4191915 4194593 D catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; PII uridylyl-transferase 4191915..4194593 Serratia proteamaculans 568 5607191 YP_001480017.1 CDS dapD NC_009832.1 4194637 4195461 D catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 4194637..4195461 Serratia proteamaculans 568 5607173 YP_001480018.1 CDS Spro_3794 NC_009832.1 4195591 4195980 D KEGG: yen:YE3288 hypothetical protein; hypothetical protein 4195591..4195980 Serratia proteamaculans 568 5607174 YP_001480019.1 CDS Spro_3795 NC_009832.1 4196079 4196528 R An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin complement(4196079..4196528) Serratia proteamaculans 568 5607175 YP_001480020.1 CDS Spro_3796 NC_009832.1 4196562 4197332 R catalyzes formation of pseudouridine at position 65 in tRNA-Ile1 and tRNA-Asp; tRNA pseudouridine synthase C complement(4196562..4197332) Serratia proteamaculans 568 5607155 YP_001480021.1 CDS Spro_3797 NC_009832.1 4197332 4197661 R PFAM: protein of unknown function DUF446; KEGG: yen:YE3291 hypothetical protein; hypothetical protein complement(4197332..4197661) Serratia proteamaculans 568 5607156 YP_001480022.1 CDS Spro_3798 NC_009832.1 4197845 4199083 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A0282 major facilitator superfamily (MFS) transporter; major facilitator transporter 4197845..4199083 Serratia proteamaculans 568 5607157 YP_001480023.1 CDS Spro_3799 NC_009832.1 4199704 4200288 R putative SecY regulator that either chelates excess SecY or negatively regulates the SecYE translocase function; SecY interacting protein Syd complement(4199704..4200288) Serratia proteamaculans 568 5607127 YP_001480024.1 CDS queF NC_009832.1 4200319 4201164 D catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 4200319..4201164 Serratia proteamaculans 568 5607128 YP_001480025.1 CDS Spro_3801 NC_009832.1 4201364 4202728 D PFAM: conserved hypothetical protein; KEGG: eca:ECA1019 lysine decarboxylase family protein; hypothetical protein 4201364..4202728 Serratia proteamaculans 568 5607129 YP_001480026.1 CDS xni NC_009832.1 4202785 4203540 D has 3'-5' exonuclease activity that preferentially acts on ssDNA; also 3'-phosphodiesterase activity at sites with 3' incised apurinic/apyrimidinic sites; can remove 3' phosphoglycolate groups; exonuclease IX 4202785..4203540 Serratia proteamaculans 568 5606967 YP_001480027.1 CDS Spro_3803 NC_009832.1 4203571 4204674 R KEGG: ypi:YpsIP31758_1001 hypothetical protein; putative RNA 2'-O-ribose methyltransferase complement(4203571..4204674) Serratia proteamaculans 568 5606968 YP_001480028.1 CDS Spro_3804 NC_009832.1 4204667 4205062 R PFAM: protein of unknown function DUF423; KEGG: yen:YE3299 hypothetical protein; hypothetical protein complement(4204667..4205062) Serratia proteamaculans 568 5606969 YP_001480029.1 CDS Spro_3805 NC_009832.1 4205115 4206032 R Glycine cleavage system transcriptional activator; activates the gcvTHP operon in the presence of glycine and represses the operon in its absence; DNA-binding transcriptional activator GcvA complement(4205115..4206032) Serratia proteamaculans 568 5606916 YP_001480030.1 CDS Spro_3806 NC_009832.1 4206415 4206639 R PFAM: protein of unknown function DUF903; KEGG: yen:YE3302 lipoprotein; hypothetical protein complement(4206415..4206639) Serratia proteamaculans 568 5606917 YP_001480031.1 CDS Spro_3807 NC_009832.1 4206834 4208039 D PFAM: aminotransferase class V; KEGG: kpn:KPN_03161 cysteine sulfinate desulfinase; cysteine sulfinate desulfinase 4206834..4208039 Serratia proteamaculans 568 5606918 YP_001480032.1 CDS Spro_3808 NC_009832.1 4208058 4208492 D PFAM: Fe-S metabolism associated SufE; KEGG: yps:YPTB3019 hypothetical protein; Fe-S metabolism associated SufE 4208058..4208492 Serratia proteamaculans 568 5606911 YP_001480033.1 CDS Spro_3809 NC_009832.1 4208483 4209289 R PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: yps:YPTB3020 hypothetical protein; UBA/THIF-type NAD/FAD binding protein complement(4208483..4209289) Serratia proteamaculans 568 5606912 YP_001480034.1 CDS mltA NC_009832.1 4209362 4210504 R membrane-bound, lytic; catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues; murein transglycosylase A complement(4209362..4210504) Serratia proteamaculans 568 5606913 YP_001480035.1 CDS Spro_3811 NC_009832.1 4211180 4212433 R PFAM: cell wall hydrolase/autolysin; KEGG: yen:YE3307 N-acetylmuramoyl-L-alanine amidase AmiC precursor; N-acetylmuramoyl-L-alanine amidase complement(4211180..4212433) Serratia proteamaculans 568 5602985 YP_001480036.1 CDS Spro_3812 NC_009832.1 4212673 4213998 D catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis; N-acetylglutamate synthase 4212673..4213998 Serratia proteamaculans 568 5606903 YP_001480037.1 CDS recD NC_009832.1 4214035 4215900 R helicase/nuclease; with RecBC catalyzes the exonucleolytic cleavage of DNA; RecD has 5' to 3' helicase activity; exonuclease V subunit alpha complement(4214035..4215900) Serratia proteamaculans 568 5606904 YP_001480038.1 CDS recB NC_009832.1 4215897 4219448 R helicase/nuclease; with RecCD catalyzes the exonucleolytic cleavage of DNA; RecD has 5' to 3' helicase activity; exonuclease V subunit beta complement(4215897..4219448) Serratia proteamaculans 568 5606807 YP_001480039.1 CDS Spro_3815 NC_009832.1 4219445 4222333 R PFAM: peptidase M16 domain protein; KEGG: yen:YE3311 protease III precursor; peptidase M16 domain-containing protein complement(4219445..4222333) Serratia proteamaculans 568 5606808 YP_001480040.1 CDS recC NC_009832.1 4222563 4225934 R catalyzes ATP-dependent exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield 5'-phosphooligonucleotides; component of the RecBCD (Exo V) helicase/nuclease complex that is essential for recombination; exonuclease V subunit gamma complement(4222563..4225934) Serratia proteamaculans 568 5606809 YP_001480041.1 CDS Spro_3817 NC_009832.1 4225968 4226309 R KEGG: eca:ECA0992 putative prepilin peptidase dependent protein c precursor; putative prepilin peptidase dependent protein c complement(4225968..4226309) Serratia proteamaculans 568 5606804 YP_001480042.1 CDS Spro_3818 NC_009832.1 4226299 4226745 R KEGG: yen:YE3314 hypothetical protein; hypothetical protein complement(4226299..4226745) Serratia proteamaculans 568 5606805 YP_001480043.1 CDS Spro_3819 NC_009832.1 4226742 4227320 R KEGG: ypi:YpsIP31758_0986 putative prepilin peptidase dependent protein; putative prepilin peptidase dependent protein complement(4226742..4227320) Serratia proteamaculans 568 5606806 YP_001480044.1 CDS Spro_3820 NC_009832.1 4227308 4227817 R KEGG: yen:YE3316 hypothetical protein; hypothetical protein complement(4227308..4227817) Serratia proteamaculans 568 5606798 YP_001480045.1 CDS thyA NC_009832.1 4228016 4228810 R ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase complement(4228016..4228810) Serratia proteamaculans 568 5606799 YP_001480046.1 CDS Spro_3822 NC_009832.1 4228818 4229690 R transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase complement(4228818..4229690) Serratia proteamaculans 568 5606800 YP_001480047.1 CDS Spro_3823 NC_009832.1 4229884 4232130 R member of a second PTS chain involved in nitrogen metabolism; PtsP phosphorylates NPr; fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain complement(4229884..4232130) Serratia proteamaculans 568 5606720 YP_001480048.1 CDS Spro_3824 NC_009832.1 4232143 4232670 R hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase complement(4232143..4232670) Serratia proteamaculans 568 5606721 YP_001480049.1 CDS Spro_3825 NC_009832.1 4233367 4234053 D MutH; Sequence-specific endonuclease that cleaves unmethylated GATC sequences during DNA repair; DNA mismatch repair protein 4233367..4234053 Serratia proteamaculans 568 5606722 YP_001480050.1 CDS Spro_3826 NC_009832.1 4234149 4234865 D PFAM: Integral membrane protein TerC; KEGG: yen:YE3323 putative integral membrane protein; integral membrane protein TerC 4234149..4234865 Serratia proteamaculans 568 5606662 YP_001480051.1 CDS Spro_3827 NC_009832.1 4235033 4235251 D PFAM: protein of unknown function DUF903; KEGG: sdy:SDY_3050 hypothetical protein; hypothetical protein 4235033..4235251 Serratia proteamaculans 568 5606663 YP_001480052.1 CDS tas NC_009832.1 4235449 4236489 D complements the prephenate dehydrogenase dysfunction of an Escherichia coli tyrosine auxotroph strain; member of the aldo/keto reductase 2 family; crystal structure of purified Escherichia coli protein shows bound NADPH; putative aldo-keto reductase 4235449..4236489 Serratia proteamaculans 568 5606664 YP_001480053.1 CDS Spro_3829 NC_009832.1 4236542 4237738 R PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE3326 hypothetical protein; lysophospholipid transporter LplT complement(4236542..4237738) Serratia proteamaculans 568 5606634 YP_001480054.1 CDS Spro_3830 NC_009832.1 4237738 4239891 R Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3-phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1; bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase complement(4237738..4239891) Serratia proteamaculans 568 5606635 YP_001480055.1 CDS Spro_3831 NC_009832.1 4240534 4242792 R PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: yen:YE3330 putative biotin sulfoxide reductas2; molybdopterin oxidoreductase complement(4240534..4242792) Serratia proteamaculans 568 5606636 YP_001480056.1 CDS Spro_3832 NC_009832.1 4243012 4244031 D controls transcription of galETKM; DNA-binding transcriptional regulator GalR 4243012..4244031 Serratia proteamaculans 568 5606566 YP_001480057.1 CDS Spro_3833 NC_009832.1 4244028 4244483 R PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA3643 GnaT-family acetyltransferase; GCN5-like N-acetyltransferase complement(4244028..4244483) Serratia proteamaculans 568 5606567 YP_001480058.1 CDS Spro_3834 NC_009832.1 4244638 4245648 D PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: eca:ECA3649 transcriptional repressor of carbon metabolism; LacI family transcription regulator 4244638..4245648 Serratia proteamaculans 568 5606568 YP_001480059.1 CDS Spro_3835 NC_009832.1 4245824 4246126 D PFAM: helix-turn-helix domain protein; KEGG: mmw:Mmwyl1_0665 putative transcriptional regulator, XRE family; XRE family transcriptional regulator 4245824..4246126 Serratia proteamaculans 568 5606523 YP_001480060.1 CDS Spro_3836 NC_009832.1 4246160 4247422 R catalyzes the decarboxylation of diaminopimelate into lysine; pyridoxal phosphate(PLP)-binding; diaminopimelate decarboxylase complement(4246160..4247422) Serratia proteamaculans 568 5606524 YP_001480061.1 CDS Spro_3837 NC_009832.1 4247555 4248478 D activates the transcription of the lysA gene encoding diaminopimelate decarboxylase; DNA-binding transcriptional regulator LysR 4247555..4248478 Serratia proteamaculans 568 5606525 YP_001480062.1 CDS Spro_3838 NC_009832.1 4248468 4249622 R PFAM: major facilitator superfamily MFS_1; KEGG: ypi:YpsIP31758_0971 transporter, major facilitator family; major facilitator transporter complement(4248468..4249622) Serratia proteamaculans 568 5606508 YP_001480063.1 CDS Spro_3839 NC_009832.1 4249938 4250846 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ypi:YpsIP31758_0969 substrate-binding transcriptional regulator, LysR family; LysR family transcriptional regulator complement(4249938..4250846) Serratia proteamaculans 568 5606509 YP_001480064.1 CDS Spro_3840 NC_009832.1 4250956 4251840 D PFAM: beta-lactamase domain protein; KEGG: yps:YPTB3049 hypothetical protein; beta-lactamase domain-containing protein 4250956..4251840 Serratia proteamaculans 568 5606510 YP_001480065.1 CDS Spro_3841 NC_009832.1 4251916 4252566 D KEGG: rso:RSc1444 hypothetical protein; hypothetical protein 4251916..4252566 Serratia proteamaculans 568 5606430 YP_001480066.1 CDS Spro_3842 NC_009832.1 4252616 4253323 R KEGG: spt:SPA0730 hypothetical protein; hypothetical protein complement(4252616..4253323) Serratia proteamaculans 568 5606431 YP_001480067.1 CDS Spro_3843 NC_009832.1 4253515 4255251 D PFAM: ABC transporter related; SbmABacA family protein; ABC transporter domain protein; SMART: AAA ATPase; KEGG: mms:mma_0271 ABC-type transport system, permease and ATPase components; ABC transporter 4253515..4255251 Serratia proteamaculans 568 5606432 YP_001480068.1 CDS Spro_3844 NC_009832.1 4255292 4255726 R PFAM: PTS system fructose subfamily IIA component; KEGG: plu:plu0838 unnamed protein product; similar to putative PTS system IIA component YadI of Escherichia coli; PTS system fructose subfamily transporter subunit IIA complement(4255292..4255726) Serratia proteamaculans 568 5606391 YP_001480069.1 CDS Spro_3845 NC_009832.1 4255737 4256630 R PFAM: PTS system mannose/fructose/sorbose family IID component; KEGG: plu:plu0837 PTS system, N-acetylgalactosamine-specific IID component (EIID-AGA) (N-acetylgalactosamine-permease IID component) (phosphotransferase enzyme II, D component); PTS system mannose/fructose/sorbose family transporter subunit IID complement(4255737..4256630) Serratia proteamaculans 568 5606392 YP_001480070.1 CDS Spro_3846 NC_009832.1 4256620 4257399 R PFAM: phosphotransferase system PTS sorbose-specific IIC subunit; KEGG: plu:plu0836 PTS system, N-acetylgalactosamine-specific IIC component 1 (EIIC-AGA) (N-acetylgalactosamine-permease IIC component 1); PTS system sorbose-specific transporter subunit IIC complement(4256620..4257399) Serratia proteamaculans 568 5606393 YP_001480071.1 CDS Spro_3847 NC_009832.1 4257414 4257890 R KEGG: plu:plu0835 PTS system, N-acetylgalactosamine-specific IIB component 2 (EIIB-AGA') (N-acetylgalactosamine-permease IIB component 2) (phosphotransferase enzyme II, B component 2); TIGRFAM: PTS system, mannose/fructose/sorbose family, IIB subunit; PFAM: PTS system sorbose subfamily IIB component; PTS system mannose/fructose/sorbose family transporter subunit IIB complement(4257414..4257890) Serratia proteamaculans 568 5606252 YP_001480072.1 CDS Spro_3848 NC_009832.1 4257892 4259175 R PFAM: D-tagatose-bisphosphate aldolase class II accessory protein AgaZ; KEGG: plu:plu0833 putative tagatose 6-phosphate kinase AgaZ; tagatose-6-phosphate kinase complement(4257892..4259175) Serratia proteamaculans 568 5606253 YP_001480073.1 CDS Spro_3849 NC_009832.1 4259199 4259972 R PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: plu:plu0832 putative aga operon transcriptional repressor; DeoR family transcriptional regulator complement(4259199..4259972) Serratia proteamaculans 568 5606254 YP_001480074.1 CDS Spro_3850 NC_009832.1 4260486 4261706 D PFAM: major facilitator superfamily MFS_1; KEGG: stm:STM1278 putative MFS family transport protein (amino acid/amine transport); major facilitator transporter 4260486..4261706 Serratia proteamaculans 568 5606383 YP_001480075.1 CDS Spro_3851 NC_009832.1 4261696 4261950 R hypothetical protein complement(4261696..4261950) Serratia proteamaculans 568 5606384 YP_001480076.1 CDS Spro_3852 NC_009832.1 4262397 4264049 R efflux pump for the antibacterial peptide microcin J25; multidrug transporter membrane component/ATP-binding component complement(4262397..4264049) Serratia proteamaculans 568 5606385 YP_001480077.1 CDS Spro_3853 NC_009832.1 4264203 4265123 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pin:Ping_1689 transcriptional regulator, substrate-binding of LysR family protein; LysR family transcriptional regulator 4264203..4265123 Serratia proteamaculans 568 5606180 YP_001480078.1 CDS Spro_3854 NC_009832.1 4265458 4267038 D TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: ppr:PBPRA2223 hypothetical L-lactate permease (LctP); L-lactate transport 4265458..4267038 Serratia proteamaculans 568 5606181 YP_001480079.1 CDS lldD NC_009832.1 4267073 4268215 D flavin mononucleotide-dependent dehydrogenase; functions in aerobic respiration and also has a role in anaerobic nitrate respiration; L-lactate dehydrogenase 4267073..4268215 Serratia proteamaculans 568 5606182 YP_001480080.1 CDS Spro_3856 NC_009832.1 4268280 4269230 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: kpn:KPN_02460 putative transcriptional regulator (LysR family); LysR family transcriptional regulator complement(4268280..4269230) Serratia proteamaculans 568 5606088 YP_001480081.1 CDS Spro_3857 NC_009832.1 4269371 4269760 D PFAM: 4-oxalocrotonate tautomerase; KEGG: kpn:KPN_02461 putative 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase 4269371..4269760 Serratia proteamaculans 568 5606089 YP_001480082.1 CDS Spro_3858 NC_009832.1 4269804 4271573 R PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: yps:YPTB1082 putative ABC transport protein with fused ATP binding and permease domains; ABC transporter-like protein complement(4269804..4271573) Serratia proteamaculans 568 5606090 YP_001480083.1 CDS Spro_3859 NC_009832.1 4271783 4272352 D KEGG: ypi:YpsIP31758_0502 hypothetical protein; acid-resistance membrane protein 4271783..4272352 Serratia proteamaculans 568 5606071 YP_001480084.1 CDS Spro_3860 NC_009832.1 4272508 4273437 D functional analog of DnaJ; co-chaperone with DnaK, molecular chaperone in an adaptive response to environmental stresses other than heat shock; curved DNA-binding protein CbpA 4272508..4273437 Serratia proteamaculans 568 5606072 YP_001480085.1 CDS Spro_3861 NC_009832.1 4273430 4273735 D with CpbA modulates the activity of the dnaK chaperone system; interacts with CbpA and inhibits both the DnaJ-like co-chaperone activity and the DNA binding activity of CbpA; chaperone-modulator protein CbpM 4273430..4273735 Serratia proteamaculans 568 5606073 YP_001480086.1 CDS Spro_3862 NC_009832.1 4274896 4275108 D PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: ent:Ent638_0201 putative cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein 4274896..4275108 Serratia proteamaculans 568 5605964 YP_001480087.1 CDS Spro_3863 NC_009832.1 4275274 4276614 R functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to DcuA; DcuA and DcuB function as independent and mutually redundant C4-dicarboxylate (aspartate, malate, fumarate and succinate) transporters; anaerobic C4-dicarboxylate transporter complement(4275274..4276614) Serratia proteamaculans 568 5605965 YP_001480088.1 CDS Spro_3864 NC_009832.1 4276937 4277851 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mms:mma_0767 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(4276937..4277851) Serratia proteamaculans 568 5605966 YP_001480089.1 CDS Spro_3865 NC_009832.1 4277972 4278715 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pmy:Pmen_4578 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4277972..4278715 Serratia proteamaculans 568 5604029 YP_001480090.1 CDS Spro_3866 NC_009832.1 4278954 4279703 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ava:Ava_3459 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4278954..4279703 Serratia proteamaculans 568 5604030 YP_001480091.1 CDS Spro_3867 NC_009832.1 4279727 4281193 D PFAM: aldehyde dehydrogenase; KEGG: ppu:PP_2487 aldehyde dehydrogenase family protein; aldehyde dehydrogenase 4279727..4281193 Serratia proteamaculans 568 5604031 YP_001480092.1 CDS Spro_3868 NC_009832.1 4281940 4282584 D KEGG: vco:VC0395_A0804 hypothetical protein; hypothetical protein 4281940..4282584 Serratia proteamaculans 568 5605920 YP_001480093.1 CDS Spro_3869 NC_009832.1 4282581 4283810 D KEGG: vpa:VP1253 NifS-related protein; TIGRFAM: cysteine desulfurase family protein; PFAM: aminotransferase class V; cysteine desulfurase family protein 4282581..4283810 Serratia proteamaculans 568 5605921 YP_001480094.1 CDS Spro_3870 NC_009832.1 4284451 4284693 D PFAM: Prophage CP4-57 regulatory; KEGG: ecv:APECO1_4024 putative phage regulatory protein; phage transcriptional regulator AlpA 4284451..4284693 Serratia proteamaculans 568 5605922 YP_001480095.1 CDS Spro_3871 NC_009832.1 4284718 4285068 D hypothetical protein 4284718..4285068 Serratia proteamaculans 568 5605883 YP_001480096.1 CDS Spro_3872 NC_009832.1 4285543 4286406 D hypothetical protein 4285543..4286406 Serratia proteamaculans 568 5605884 YP_001480097.1 CDS Spro_3873 NC_009832.1 4286554 4286922 D hypothetical protein 4286554..4286922 Serratia proteamaculans 568 5605885 YP_001480098.1 CDS Spro_3874 NC_009832.1 4286946 4287464 D hypothetical protein 4286946..4287464 Serratia proteamaculans 568 5605754 YP_001480099.1 CDS Spro_3875 NC_009832.1 4287983 4290535 R KEGG: ecv:APECO1_4054 hypothetical protein; hypothetical protein complement(4287983..4290535) Serratia proteamaculans 568 5605755 YP_001480100.1 CDS Spro_3876 NC_009832.1 4290535 4292223 R hypothetical protein complement(4290535..4292223) Serratia proteamaculans 568 5605756 YP_001480101.1 CDS Spro_3877 NC_009832.1 4292220 4294916 R PFAM: Lytic transglycosylase catalytic; KEGG: ecv:APECO1_4052 hypothetical protein; lytic transglycosylase complement(4292220..4294916) Serratia proteamaculans 568 5605724 YP_001480102.1 CDS Spro_3878 NC_009832.1 4295592 4296500 R KEGG: net:Neut_1492 hypothetical protein; hypothetical protein complement(4295592..4296500) Serratia proteamaculans 568 5605725 YP_001480103.1 CDS Spro_3879 NC_009832.1 4296868 4297275 R hypothetical protein complement(4296868..4297275) Serratia proteamaculans 568 5605726 YP_001480104.1 CDS Spro_3880 NC_009832.1 4297409 4297750 R KEGG: ece:Z1446 unknown protein encoded by bacteriophage BP-933W; hypothetical protein complement(4297409..4297750) Serratia proteamaculans 568 5605666 YP_001480105.1 CDS Spro_3881 NC_009832.1 4298787 4301576 R PFAM: P4 alpha zinc-binding domain protein; KEGG: eca:ECA2754 putative prophage primase; P4 alpha zinc-binding domain-containing protein complement(4298787..4301576) Serratia proteamaculans 568 5605667 YP_001480106.1 CDS Spro_3882 NC_009832.1 4301906 4302502 R hypothetical protein complement(4301906..4302502) Serratia proteamaculans 568 5605668 YP_001480107.1 CDS Spro_3883 NC_009832.1 4302888 4303619 R KEGG: ecc:c1487 hypothetical protein; hypothetical protein complement(4302888..4303619) Serratia proteamaculans 568 5605383 YP_001480108.1 CDS Spro_3884 NC_009832.1 4303612 4304421 R PFAM: AntA/AntB antirepressor domain protein; KEGG: sbo:SBO_3650 putative anti-repressor protein; AntA/AntB antirepressor domain-containing protein complement(4303612..4304421) Serratia proteamaculans 568 5605384 YP_001480109.1 CDS Spro_3885 NC_009832.1 4304518 4304724 R PFAM: Prophage CP4-57 regulatory; KEGG: yen:YE0975A hypothetical protein; phage transcriptional regulator AlpA complement(4304518..4304724) Serratia proteamaculans 568 5605385 YP_001480110.1 CDS Spro_3886 NC_009832.1 4304905 4305441 R hypothetical protein complement(4304905..4305441) Serratia proteamaculans 568 5605324 YP_001480111.1 CDS Spro_3887 NC_009832.1 4305958 4307172 R PFAM: integrase family protein; KEGG: ypn:YPN_3086 integrase; integrase family protein complement(4305958..4307172) Serratia proteamaculans 568 5605325 YP_001480112.1 CDS lysS NC_009832.1 4307579 4309096 R class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase complement(4307579..4309096) Serratia proteamaculans 568 5602986 YP_001480113.1 CDS Spro_3890 NC_009832.1 4310371 4312104 R 5'-3' single-stranded-DNA-specific exonuclease; ssDNA exonuclease RecJ complement(4310371..4312104) Serratia proteamaculans 568 5606657 YP_001480114.1 CDS Spro_3891 NC_009832.1 4312111 4312827 R DsbC; periplasmic protein with protein disulfide isomerase activity; this protein also shows disulfide oxidoreductase activity; thiol:disulfide interchange protein DsbC complement(4312111..4312827) Serratia proteamaculans 568 5605317 YP_001480115.1 CDS xerD NC_009832.1 4312855 4313754 R site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerD complement(4312855..4313754) Serratia proteamaculans 568 5605318 YP_001480116.1 CDS Spro_3893 NC_009832.1 4313778 4314380 D An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic; flavodoxin FldB 4313778..4314380 Serratia proteamaculans 568 5605175 YP_001480117.1 CDS Spro_3894 NC_009832.1 4314417 4315781 R PFAM: Inner membrane CreD family protein; KEGG: yen:YE3382 hypothetical protein; hypothetical protein complement(4314417..4315781) Serratia proteamaculans 568 5605176 YP_001480118.1 CDS Spro_3895 NC_009832.1 4315864 4317282 R part of a two-component regulatory system with CreB or PhoB; involved in catabolic regulation; sensory histidine kinase CreC complement(4315864..4317282) Serratia proteamaculans 568 5605177 YP_001480119.1 CDS Spro_3896 NC_009832.1 4317279 4317974 R response regulator in two-component regulatory system with CreC; CreB protein is phosphorylated by sensor protein phospho-CreC; involved in catabolic regulation; DNA-binding response regulator CreB complement(4317279..4317974) Serratia proteamaculans 568 5605124 YP_001480120.1 CDS Spro_3897 NC_009832.1 4317974 4318396 R PFAM: protein of unknown function DUF1434; KEGG: yen:YE3385 hypothetical protein; hypothetical protein complement(4317974..4318396) Serratia proteamaculans 568 5605125 YP_001480121.1 CDS Spro_3898 NC_009832.1 4318377 4318643 R PFAM: protein of unknown function DUF339; KEGG: kpn:KPN_03325 hypothetical protein; hypothetical protein complement(4318377..4318643) Serratia proteamaculans 568 5605126 YP_001480122.1 CDS Spro_3899 NC_009832.1 4318967 4319959 D physiological role is not clear; not essential for growth but mutants grow poorly; mutations suppress hda null mutations; may be involved in regulation of ATP-DnaA levels; may also be involved in regulation of tRNA modifications; can bind folic acid and tetrahydrofolate; forms a three domain ring-like structure with a central channel; structurally similar to DMGO protein from A. globiformis; shows sequence similarity to yeast CAF17 transcriptional regulator; putative global regulator 4318967..4319959 Serratia proteamaculans 568 5605065 YP_001480123.1 CDS Spro_3900 NC_009832.1 4320050 4320724 R TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein; KEGG: yps:YPTB3176 putative hemolysin III; hemolysin III family channel protein complement(4320050..4320724) Serratia proteamaculans 568 5605066 YP_001480124.1 CDS Spro_3901 NC_009832.1 4320908 4321516 D PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: eca:ECA0756 hypothetical protein; metal dependent phosphohydrolase 4320908..4321516 Serratia proteamaculans 568 5605067 YP_001480125.1 CDS Spro_3902 NC_009832.1 4321567 4322892 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_4787 major facilitator superfamily MFS_1; major facilitator transporter complement(4321567..4322892) Serratia proteamaculans 568 5604843 YP_001480126.1 CDS Spro_3903 NC_009832.1 4322889 4323542 R KEGG: bbr:BB2981 hypothetical protein; hypothetical protein complement(4322889..4323542) Serratia proteamaculans 568 5604844 YP_001480127.1 CDS Spro_3904 NC_009832.1 4323594 4324943 R PFAM: Amidase; KEGG: bbr:BB2998 putative amidase; amidase complement(4323594..4324943) Serratia proteamaculans 568 5604845 YP_001480128.1 CDS Spro_3905 NC_009832.1 4324943 4325656 R KEGG: bbr:BB2999 hypothetical protein; hypothetical protein complement(4324943..4325656) Serratia proteamaculans 568 5604666 YP_001480129.1 CDS Spro_3906 NC_009832.1 4325729 4326463 D PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: xau:Xaut_0040 transcriptional regulator, GntR family; GntR family transcriptional regulator 4325729..4326463 Serratia proteamaculans 568 5604667 YP_001480130.1 CDS Spro_3907 NC_009832.1 4326554 4326832 R KEGG: vei:Veis_5032 putative cytoplasmic protein; putative cytoplasmic protein complement(4326554..4326832) Serratia proteamaculans 568 5604668 YP_001480131.1 CDS Spro_3908 NC_009832.1 4326849 4327157 R PFAM: protein of unknown function DUF497; KEGG: gur:Gura_2272 protein of unknown function DUF497; hypothetical protein complement(4326849..4327157) Serratia proteamaculans 568 5604559 YP_001480132.1 CDS Spro_3909 NC_009832.1 4327254 4328000 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: kpn:KPN_03338 putative oxidoreductase; hypothetical protein complement(4327254..4328000) Serratia proteamaculans 568 5604560 YP_001480133.1 CDS Spro_3910 NC_009832.1 4328564 4329223 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bch:Bcen2424_4924 two component transcriptional regulator, winged helix family; two component transcriptional regulator 4328564..4329223 Serratia proteamaculans 568 5604561 YP_001480134.1 CDS Spro_3911 NC_009832.1 4329220 4330626 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: eba:ebA6233 sensor histidine kinase; integral membrane sensor signal transduction histidine kinase 4329220..4330626 Serratia proteamaculans 568 5604448 YP_001480135.1 CDS Spro_3912 NC_009832.1 4330726 4331694 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: swi:Swit_2294 alcohol dehydrogenase, zinc-binding domain protein; alcohol dehydrogenase complement(4330726..4331694) Serratia proteamaculans 568 5604449 YP_001480136.1 CDS Spro_3913 NC_009832.1 4331809 4335084 R TIGRFAM: outer membrane autotransporter barrel domain; PFAM: Autotransporter beta- domain protein; KEGG: dps:DP0247 similar to serine protease; outer membrane autotransporter complement(4331809..4335084) Serratia proteamaculans 568 5604450 YP_001480137.1 CDS Spro_3914 NC_009832.1 4335324 4338203 R acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase complement(4335324..4338203) Serratia proteamaculans 568 5604354 YP_001480138.1 CDS Spro_3915 NC_009832.1 4338296 4338682 R TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; KEGG: yen:YE3392 glycine cleavage system H protein; glycine cleavage system H protein complement(4338296..4338682) Serratia proteamaculans 568 5604355 YP_001480139.1 CDS gcvT NC_009832.1 4338728 4339825 R catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T complement(4338728..4339825) Serratia proteamaculans 568 5604356 YP_001480140.1 CDS Spro_3917 NC_009832.1 4340371 4341573 R TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: yen:YE3394 putative monooxygenase; hypothetical protein complement(4340371..4341573) Serratia proteamaculans 568 5604217 YP_001480141.1 CDS Spro_3918 NC_009832.1 4341657 4342835 R Oxygenase that introduces the hydroxyl group at carbon four of 2-octaprenyl-6-methoxyphenol resulting in the formation of 2-octaprenyl-6-methoxy-1,4-benzoquinone; 2-octaprenyl-6-methoxyphenyl hydroxylase complement(4341657..4342835) Serratia proteamaculans 568 5604218 YP_001480142.1 CDS Spro_3919 NC_009832.1 4342840 4344153 R exopeptidase able to cleave the peptide bond of the last amino acid if linked to a proline residue; substrate can be as short as a dipeptide; proline aminopeptidase P II complement(4342840..4344153) Serratia proteamaculans 568 5604219 YP_001480143.1 CDS Spro_3920 NC_009832.1 4344214 4344792 R the crystal structure of Haemophilus influenzae HI0817 showed that this protein forms dimers; function unknown; hypothetical protein complement(4344214..4344792) Serratia proteamaculans 568 5604188 YP_001480144.1 CDS Spro_3921 NC_009832.1 4345114 4345443 D PFAM: protein of unknown function DUF710; KEGG: yen:YE3398 hypothetical protein; Z-ring-associated protein 4345114..4345443 Serratia proteamaculans 568 5604189 YP_001480145.1 CDS Spro_3922 NC_009832.1 4345624 4346304 D PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: ypp:YPDSF_0601 5-formyltetrahydrofolate cyclo-ligase-family protein; 5-formyltetrahydrofolate cyclo-ligase 4345624..4346304 Serratia proteamaculans 568 5604190 YP_001480146.1 CDS Spro_3923 NC_009832.1 4346348 4347586 R catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase complement(4346348..4347586) Serratia proteamaculans 568 5604007 YP_001480147.1 CDS Spro_3924 NC_009832.1 4347888 4348607 R Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A complement(4347888..4348607) Serratia proteamaculans 568 5604008 YP_001480148.1 CDS Spro_3925 NC_009832.1 4348748 4349641 D specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; chromosome replication initiation inhibitor protein 4348748..4349641 Serratia proteamaculans 568 5604009 YP_001480149.1 CDS Spro_3926 NC_009832.1 4349942 4350673 R PFAM: protein of unknown function DUF541; KEGG: yen:YE3403 hypothetical protein; hypothetical protein complement(4349942..4350673) Serratia proteamaculans 568 5604163 YP_001480150.1 CDS Spro_3927 NC_009832.1 4350785 4351402 R Involved in the export of arginine; arginine exporter protein complement(4350785..4351402) Serratia proteamaculans 568 5604164 YP_001480151.1 CDS Spro_3928 NC_009832.1 4351526 4352344 R PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: ecv:APECO1_2876 predicted DNA-binding transcriptional repressor; IclR family transcriptional regulator complement(4351526..4352344) Serratia proteamaculans 568 5604165 YP_001480152.1 CDS Spro_3929 NC_009832.1 4352707 4354260 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pmu:PM1251 ribose transport ATP-binding protein; ABC transporter-like protein 4352707..4354260 Serratia proteamaculans 568 5603974 YP_001480153.1 CDS Spro_3930 NC_009832.1 4354253 4355335 D PFAM: inner-membrane translocator; KEGG: pmu:PM1250 ribose transport system permease; monosaccharide-transporting ATPase 4354253..4355335 Serratia proteamaculans 568 5603975 YP_001480154.1 CDS Spro_3931 NC_009832.1 4355351 4356451 D KEGG: pmu:PM1249 unknown; hypothetical protein 4355351..4356451 Serratia proteamaculans 568 5603976 YP_001480155.1 CDS Spro_3932 NC_009832.1 4356463 4357323 D PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: pmu:PM1248 gluconolactonase; gluconolactonase 4356463..4357323 Serratia proteamaculans 568 5603939 YP_001480156.1 CDS Spro_3933 NC_009832.1 4357580 4358578 D NAD(P)H-dependent; catalyzes the reduction of 2,3-diketo-L-gulonate to 3-keto-L-gulonate; 2,3-diketo-L-gulonate reductase 4357580..4358578 Serratia proteamaculans 568 5603940 YP_001480157.1 CDS Spro_3934 NC_009832.1 4358592 4359062 D PFAM: conserved hypothetical protein; KEGG: pmu:PM1255 hypothetical E.coli; hypothetical protein 4358592..4359062 Serratia proteamaculans 568 5603941 YP_001480158.1 CDS Spro_3935 NC_009832.1 4359171 4360466 D PFAM: major facilitator superfamily MFS_1; KEGG: reh:H16_B1218 MFS transporter; major facilitator transporter 4359171..4360466 Serratia proteamaculans 568 5603950 YP_001480159.1 CDS Spro_3936 NC_009832.1 4360466 4361947 D PFAM: carbohydrate kinase FGGY; KEGG: eci:UTI89_C4124 cryptic L-xylulose kinase; carbohydrate kinase FGGY 4360466..4361947 Serratia proteamaculans 568 5603951 YP_001480160.1 CDS sgbH NC_009832.1 4361944 4362600 D catalyzes the formation of L-xylulose-5-phosphate from 3-keto-L-gulonate-6-phosphate; 3-keto-L-gulonate-6-phosphate decarboxylase 4361944..4362600 Serratia proteamaculans 568 5603952 YP_001480161.1 CDS Spro_3938 NC_009832.1 4362602 4363462 D L-xylulose 5-phosphate 3-epimerase activity not yet demonstrated; may be involved in the utilization of 2,3-diketo-L-gulonate; putative L-xylulose 5-phosphate 3-epimerase 4362602..4363462 Serratia proteamaculans 568 5603915 YP_001480162.1 CDS sgbE NC_009832.1 4363456 4364157 D catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source; L-ribulose-5-phosphate 4-epimerase 4363456..4364157 Serratia proteamaculans 568 5603916 YP_001480163.1 CDS Spro_3940 NC_009832.1 4364353 4365051 D PFAM: pseudouridine synthase; KEGG: yen:YE2636 putative ribosomal large subunit pseudouridine synthase; pseudouridine synthase 4364353..4365051 Serratia proteamaculans 568 5603917 YP_001480164.1 CDS Spro_3941 NC_009832.1 4365279 4366628 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: rso:RS01667 putative 4-hydroxybenzoate transporter transmembrane protein; major facilitator transporter 4365279..4366628 Serratia proteamaculans 568 5603816 YP_001480165.1 CDS Spro_3942 NC_009832.1 4366661 4367527 R PFAM: MscS Mechanosensitive ion channel; Conserved TM helix repeat-containing protein; KEGG: ypi:YpsIP31758_0851 transporter, small conductance mechanosensitive ion channel (MscS) family; mechanosensitive ion channel MscS complement(4366661..4367527) Serratia proteamaculans 568 5603817 YP_001480166.1 CDS Spro_3943 NC_009832.1 4367721 4368389 D PFAM: protein of unknown function DUF1345; KEGG: yen:YE0004 hypothetical protein; hypothetical protein 4367721..4368389 Serratia proteamaculans 568 5603818 YP_001480167.1 CDS Spro_3944 NC_009832.1 4368446 4369525 R catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; fructose-bisphosphate aldolase complement(4368446..4369525) Serratia proteamaculans 568 5603819 YP_001480168.1 CDS pgk NC_009832.1 4369641 4370801 R Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase complement(4369641..4370801) Serratia proteamaculans 568 5603820 YP_001480169.1 CDS Spro_3946 NC_009832.1 4370879 4371895 R NAD-dependent; catalyzes the formation of 4-phosphoerythronate from erythrose 4-phosphate in the biosynthesis of pyridoxine 5'-phosphate; erythrose 4-phosphate dehydrogenase complement(4370879..4371895) Serratia proteamaculans 568 5603821 YP_001480170.1 CDS Spro_3947 NC_009832.1 4372264 4373334 R PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: yps:YPTB2770 probable ABC transporter, ATP-binding subunit; ABC transporter-like protein complement(4372264..4373334) Serratia proteamaculans 568 5603758 YP_001480171.1 CDS Spro_3948 NC_009832.1 4373327 4375096 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypi:YpsIP31758_1259 ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component complement(4373327..4375096) Serratia proteamaculans 568 5603759 YP_001480172.1 CDS Spro_3949 NC_009832.1 4375175 4376263 R PFAM: extracellular solute-binding protein family 1; KEGG: yps:YPTB2772 putative ABC transporter, periplasmmic iron binding protein; extracellular solute-binding protein complement(4375175..4376263) Serratia proteamaculans 568 5603760 YP_001480173.1 CDS Spro_3950 NC_009832.1 4376434 4377351 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: aav:Aave_1958 protein of unknown function DUF6, transmembrane; hypothetical protein complement(4376434..4377351) Serratia proteamaculans 568 5602993 YP_001480174.1 CDS Spro_3951 NC_009832.1 4377647 4377985 D TIGRFAM: export-related chaperone CsaA; PFAM: t-RNA-binding domain protein; KEGG: bcy:Bcer98_3652 export-related chaperone CsaA; export-related chaperone CsaA 4377647..4377985 Serratia proteamaculans 568 5602994 YP_001480175.1 CDS Spro_3952 NC_009832.1 4378022 4378903 D KEGG: aor:AO090026000386 predicted protein; hypothetical protein 4378022..4378903 Serratia proteamaculans 568 5602995 YP_001480176.1 CDS Spro_3953 NC_009832.1 4379129 4380448 D PFAM: branched-chain amino acid transport system II carrier protein; KEGG: yen:YE3179 branched-chain amino acid transport system II carrier protein; branched-chain amino acid transport system II carrier protein 4379129..4380448 Serratia proteamaculans 568 5603717 YP_001480177.1 CDS Spro_3954 NC_009832.1 4380502 4382496 R catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase complement(4380502..4382496) Serratia proteamaculans 568 5603718 YP_001480178.1 CDS Spro_3955 NC_009832.1 4382735 4383487 D PFAM: peptidase M48 Ste24p; KEGG: ypi:YpsIP31758_0845 peptidase, M48 family; peptidase M48 Ste24p 4382735..4383487 Serratia proteamaculans 568 5603719 YP_001480179.1 CDS Spro_3956 NC_009832.1 4384429 4386072 R PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: kpn:KPN_03360 putative pyruvate decarboxylase; hypothetical protein complement(4384429..4386072) Serratia proteamaculans 568 5603711 YP_001480180.1 CDS Spro_3957 NC_009832.1 4386119 4387588 R PFAM: aldehyde dehydrogenase; KEGG: kpn:KPN_03361 putative aldehyde dehydrogenase; aldehyde dehydrogenase complement(4386119..4387588) Serratia proteamaculans 568 5603712 YP_001480181.1 CDS Spro_3958 NC_009832.1 4387604 4388398 R catalyzes the formation of L-aspartate to iminoaspartate in NAD(+) biosynthesis; L-aspartate dehydrogenase complement(4387604..4388398) Serratia proteamaculans 568 5603713 YP_001480182.1 CDS Spro_3959 NC_009832.1 4388416 4389210 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: kpn:KPN_03363 putative short-chain dehydrogenase; short chain dehydrogenase complement(4388416..4389210) Serratia proteamaculans 568 5603649 YP_001480183.1 CDS Spro_3960 NC_009832.1 4389207 4390025 R PFAM: alpha/beta hydrolase fold; KEGG: csa:Csal_0139 alpha/beta hydrolase; alpha/beta hydrolase fold domain-containing protein complement(4389207..4390025) Serratia proteamaculans 568 5603650 YP_001480184.1 CDS Spro_3961 NC_009832.1 4390025 4390549 R PFAM: Cupin 2 conserved barrel domain protein; KEGG: csa:Csal_0138 cupin 2 protein; cupin 2 domain-containing protein complement(4390025..4390549) Serratia proteamaculans 568 5603651 YP_001480185.1 CDS Spro_3962 NC_009832.1 4390581 4391843 R PFAM: major facilitator superfamily MFS_1; KEGG: kpn:KPN_03365 putative permease (MFS superfamily); major facilitator transporter complement(4390581..4391843) Serratia proteamaculans 568 5603614 YP_001480186.1 CDS Spro_3963 NC_009832.1 4391868 4393079 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: kpn:KPN_03366 putative ferredoxin reductase subunit; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(4391868..4393079) Serratia proteamaculans 568 5603615 YP_001480187.1 CDS Spro_3964 NC_009832.1 4393076 4394086 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: kpn:KPN_03367 putative glyoxalase/bleomycin resistance protein/dioxygenas; glyoxalase/bleomycin resistance protein/dioxygenase complement(4393076..4394086) Serratia proteamaculans 568 5603616 YP_001480188.1 CDS Spro_3965 NC_009832.1 4394128 4394922 R PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: kpn:KPN_03368 putative bacterial regulatory proteins, IclR; IclR family transcriptional regulator complement(4394128..4394922) Serratia proteamaculans 568 5603544 YP_001480189.1 CDS Spro_3966 NC_009832.1 4394951 4395706 R member of a large family of NAD or NADP-dependent oxidoreductases; paralogs occur in many bacteria; short chain dehydrogenase complement(4394951..4395706) Serratia proteamaculans 568 5603545 YP_001480190.1 CDS Spro_3967 NC_009832.1 4395703 4396746 R PFAM: Rieske [2Fe-2S] domain protein; KEGG: kpn:KPN_03370 3-phenylpropionate dioxygenase, alpha subunit; Rieske (2Fe-2S) domain-containing protein complement(4395703..4396746) Serratia proteamaculans 568 5603546 YP_001480191.1 CDS Spro_3968 NC_009832.1 4396767 4397075 R KEGG: csa:Csal_0131 hypothetical protein; hypothetical protein complement(4396767..4397075) Serratia proteamaculans 568 5603535 YP_001480192.1 CDS Spro_3969 NC_009832.1 4397078 4397395 R PFAM: Rieske [2Fe-2S] domain protein; KEGG: kpn:KPN_03371 putative ferredoxin; Rieske (2Fe-2S) domain-containing protein complement(4397078..4397395) Serratia proteamaculans 568 5603536 YP_001480193.1 CDS Spro_3970 NC_009832.1 4397790 4399037 D PFAM: major facilitator superfamily MFS_1; KEGG: kpn:KPN_03372 putative transport protein; major facilitator transporter 4397790..4399037 Serratia proteamaculans 568 5603537 YP_001480194.1 CDS Spro_3971 NC_009832.1 4399088 4399948 R catalyzes the synthesis of pseudouridine from U-2604 in the 23S ribosomal RNA; 23S rRNA pseudouridine synthase F complement(4399088..4399948) Serratia proteamaculans 568 5603148 YP_001480195.1 CDS Spro_3972 NC_009832.1 4400159 4401079 R catalyzes the formation of putrescine from agmatine; agmatinase complement(4400159..4401079) Serratia proteamaculans 568 5603149 YP_001480196.1 CDS Spro_3973 NC_009832.1 4401850 4403826 R catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis; arginine decarboxylase complement(4401850..4403826) Serratia proteamaculans 568 5603150 YP_001480197.1 CDS Spro_3974 NC_009832.1 4404720 4405874 D catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 4404720..4405874 Serratia proteamaculans 568 5603081 YP_001480198.1 CDS Spro_3975 NC_009832.1 4406001 4406123 R PFAM: Hok/gef cell toxic protein; KEGG: sty:HCM1.290c putative stable plasmid inheritance protein; Hok/gef cell toxic protein complement(4406001..4406123) Serratia proteamaculans 568 5603082 YP_001480199.1 CDS Spro_3976 NC_009832.1 4406470 4408458 R part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter involved in the high-affinity transport of Fe(3+)-ferrichrome; iron-hydroxamate transporter permease complement(4406470..4408458) Serratia proteamaculans 568 5603083 YP_001480200.1 CDS Spro_3977 NC_009832.1 4408455 4409363 R Part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter; binds to all hydroxamate siderophores; iron-hydroxamate transporter substrate-binding subunit complement(4408455..4409363) Serratia proteamaculans 568 5602979 YP_001480201.1 CDS Spro_3978 NC_009832.1 4409363 4410160 R part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter; iron-hydroxamate transporter ATP-binding subunit complement(4409363..4410160) Serratia proteamaculans 568 5602980 YP_001480202.1 CDS Spro_3979 NC_009832.1 4410208 4412397 R involved with the transport of ferrichrome across the outer membrane; binds the ferrichrome-iron ligand and interacts with the TonB protein; ferrichrome outer membrane transporter complement(4410208..4412397) Serratia proteamaculans 568 5602981 YP_001480203.1 CDS Spro_3980 NC_009832.1 4412620 4414014 R KEGG: sec:SC4187 putative periplasmic or exported protein; putative periplasmic or exported protein complement(4412620..4414014) Serratia proteamaculans 568 5602870 YP_001480204.1 CDS mrcB NC_009832.1 4414196 4416706 R bifunctional periplasmic enzyme; contains transglycosylase and transpeptidase activity; major enzyme for peptidoglycan biosynthesis in Escherichia coli; transmembrane protein; forms dimers; three variants, one of which may be a degradation product, while the other appears to result from an alternative initiation site, are found within the cell; penicillin-binding protein 1b complement(4414196..4416706) Serratia proteamaculans 568 5602871 YP_001480205.1 CDS Spro_3982 NC_009832.1 4416806 4419244 R similar in sequence to the ATP-dependent RNA helicase HrpA; ATP-dependent RNA helicase HrpB complement(4416806..4419244) Serratia proteamaculans 568 5602872 YP_001480206.1 CDS Spro_3983 NC_009832.1 4419324 4419866 D TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX; KEGG: eca:ECA3315 2'-5' RNA ligase; 2'-5' RNA ligase 4419324..4419866 Serratia proteamaculans 568 5602859 YP_001480207.1 CDS Spro_3984 NC_009832.1 4419863 4420570 D PFAM: sugar fermentation stimulation protein; KEGG: ypi:YpsIP31758_3337 sugar fermentation stimulation protein; sugar fermentation stimulation protein 4419863..4420570 Serratia proteamaculans 568 5602860 YP_001480208.1 CDS dksA NC_009832.1 4420754 4421209 D TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type; KEGG: kpn:KPN_00145 DnaK suppressor protein; RNA polymerase-binding transcription factor 4420754..4421209 Serratia proteamaculans 568 5602861 YP_001480209.1 CDS Spro_3986 NC_009832.1 4421281 4422192 D PFAM: glutamyl-tRNA synthetase class Ic; KEGG: ypi:YpsIP31758_3339 glutamyl-Q tRNA(Asp) synthetase; glutamate--tRNA ligase 4421281..4422192 Serratia proteamaculans 568 5602803 YP_001480210.1 CDS pcnB NC_009832.1 4422287 4423804 D Polymerase that creates the 3' poly(A) tail found in some mRNA's; poly(A) polymerase I 4422287..4423804 Serratia proteamaculans 568 5602804 YP_001480211.1 CDS Spro_3988 NC_009832.1 4423804 4424304 D KEGG: ypi:YpsIP31758_3341 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 4423804..4424304 Serratia proteamaculans 568 5602805 YP_001480212.1 CDS Spro_3989 NC_009832.1 4424331 4425689 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: eca:ECA0007 two-component system sensor kinase; sensor protein QseC complement(4424331..4425689) Serratia proteamaculans 568 5602798 YP_001480213.1 CDS Spro_3990 NC_009832.1 4425686 4426348 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: eca:ECA0008 two-component system response regulator; two component transcriptional regulator complement(4425686..4426348) Serratia proteamaculans 568 5602799 YP_001480214.1 CDS Spro_3991 NC_009832.1 4426452 4427312 D KEGG: ypk:y0786 3-methyl-2-oxobutanoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; 3-methyl-2-oxobutanoate hydroxymethyltransferase 4426452..4427312 Serratia proteamaculans 568 5602800 YP_001480215.1 CDS panC NC_009832.1 4427337 4428191 D catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 4427337..4428191 Serratia proteamaculans 568 5602643 YP_001480216.1 CDS Spro_3993 NC_009832.1 4428414 4428794 D Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase 4428414..4428794 Serratia proteamaculans 568 5602644 YP_001480217.1 CDS Spro_3994 NC_009832.1 4428834 4430114 R PFAM: polysaccharide deacetylase; KEGG: ypi:YpsIP31758_3346 polysaccharide deacetylase family protein; polysaccharide deacetylase complement(4428834..4430114) Serratia proteamaculans 568 5602645 YP_001480218.1 CDS Spro_3995 NC_009832.1 4430336 4431106 R PFAM: ABC-2 type transporter; KEGG: eca:ECA3324 ABC transporter integral membrane protein; ABC-2 type transporter complement(4430336..4431106) Serratia proteamaculans 568 5602579 YP_001480219.1 CDS Spro_3996 NC_009832.1 4431103 4432026 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: yen:YE0715 putative ABC transporter, ATP-binding protein; ABC transporter-like protein complement(4431103..4432026) Serratia proteamaculans 568 5602580 YP_001480220.1 CDS Spro_3997 NC_009832.1 4432263 4432919 D PFAM: carbonic anhydrase; KEGG: eca:ECA3327 putative carbonic anhydrase; carbonate dehydratase 4432263..4432919 Serratia proteamaculans 568 5602581 YP_001480221.1 CDS Spro_3998 NC_009832.1 4432957 4433493 R KEGG: yps:YPTB0723 hypoxanthine-guanine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase complement(4432957..4433493) Serratia proteamaculans 568 5602540 YP_001480222.1 CDS Spro_3999 NC_009832.1 4433592 4435211 R laccase; copper-stimulated phenoloxidase and ferroxidase which may be involved in copper detoxification; multicopper oxidase complement(4433592..4435211) Serratia proteamaculans 568 5602541 YP_001480223.1 CDS Spro_4000 NC_009832.1 4435430 4435780 D KEGG: yen:YE0711 hypothetical protein; hypothetical protein 4435430..4435780 Serratia proteamaculans 568 5602542 YP_001480224.1 CDS Spro_4001 NC_009832.1 4435891 4436754 D catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase 4435891..4436754 Serratia proteamaculans 568 5604427 YP_001480225.1 CDS Spro_4002 NC_009832.1 4436782 4437576 D S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine; S-adenosylmethionine decarboxylase 4436782..4437576 Serratia proteamaculans 568 5604428 YP_001480226.1 CDS Spro_4003 NC_009832.1 4437764 4438663 D KEGG: yen:YE1045 DNA-binding protein; GntR family transcriptional regulator 4437764..4438663 Serratia proteamaculans 568 5604429 YP_001480227.1 CDS Spro_4004 NC_009832.1 4438679 4439047 D PFAM: PRD domain protein; KEGG: yen:YE3102 hypothetical protein; PRD domain-containing protein 4438679..4439047 Serratia proteamaculans 568 5605050 YP_001480228.1 CDS Spro_4005 NC_009832.1 4439108 4440274 D PFAM: alanine racemase domain protein; KEGG: yen:YE3103 hypothetical protein; alanine racemase domain-containing protein 4439108..4440274 Serratia proteamaculans 568 5605051 YP_001480229.1 CDS Spro_4006 NC_009832.1 4440267 4441502 D PFAM: metalloenzyme domain protein; Phosphopentomutase domain protein; KEGG: yen:YE3104 metalloenzyme superfamily protein; putative mutase 4440267..4441502 Serratia proteamaculans 568 5605052 YP_001480230.1 CDS Spro_4007 NC_009832.1 4441546 4441908 R PFAM: conserved hypothetical protein; KEGG: yen:YE0706 hypothetical protein; hypothetical protein complement(4441546..4441908) Serratia proteamaculans 568 5604481 YP_001480231.1 CDS Spro_4008 NC_009832.1 4442048 4444645 R catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase complement(4442048..4444645) Serratia proteamaculans 568 5604482 YP_001480232.1 CDS Spro_4009 NC_009832.1 4445071 4446495 R E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase complement(4445071..4446495) Serratia proteamaculans 568 5604483 YP_001480233.1 CDS aceF NC_009832.1 4446729 4448621 R E2 component of pyruvate dehydrogenase multienzyme complex; in Escherichia coli AceF contains three N-terminal lipoyl domains; dihydrolipoamide acetyltransferase complement(4446729..4448621) Serratia proteamaculans 568 5604672 YP_001480234.1 CDS aceE NC_009832.1 4448635 4451298 R E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1 complement(4448635..4451298) Serratia proteamaculans 568 5604673 YP_001480235.1 CDS pdhR NC_009832.1 4451469 4452233 R activates lctPRD operon; autoregulates itself through repression of pdhR-aceEF-lpdA operon; regulates pyruvate dehydrogenase complex; transcriptional regulator PdhR complement(4451469..4452233) Serratia proteamaculans 568 5604674 YP_001480236.1 CDS Spro_4013 NC_009832.1 4452867 4454249 D PFAM: amino acid permease-associated region; KEGG: yen:YE0695 aromatic amino acid transport protein; amino acid permease-associated protein 4452867..4454249 Serratia proteamaculans 568 5604750 YP_001480237.1 CDS Spro_4014 NC_009832.1 4454446 4455846 D TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA3792 hypothetical protein; sugar (glycoside-Pentoside-hexuronide) transporter 4454446..4455846 Serratia proteamaculans 568 5604751 YP_001480238.1 CDS Spro_4015 NC_009832.1 4455857 4456807 D PFAM: glycoside hydrolase family 43; KEGG: eca:ECA3793 putatuve glycosysl hydrolase; alpha-N-arabinofuranosidase 4455857..4456807 Serratia proteamaculans 568 5604752 YP_001480239.1 CDS Spro_4016 NC_009832.1 4457006 4458241 R PFAM: cytochrome c class I; KEGG: rme:Rmet_1417 cytochrome c, class I; gluconate 2-dehydrogenase complement(4457006..4458241) Serratia proteamaculans 568 5605011 YP_001480240.1 CDS Spro_4017 NC_009832.1 4458238 4458792 R PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: rme:Rmet_1416 (2Fe-2S)-binding; 2Fe-2S iron-sulfur cluster binding domain-containing protein complement(4458238..4458792) Serratia proteamaculans 568 5605012 YP_001480241.1 CDS Spro_4018 NC_009832.1 4458789 4461578 R PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bur:Bcep18194_B1541 aldehyde oxidase; aldehyde oxidase and xanthine dehydrogenase complement(4458789..4461578) Serratia proteamaculans 568 5605013 YP_001480242.1 CDS Spro_4019 NC_009832.1 4461783 4462367 D KEGG: pfo:Pfl_4167 hypothetical protein; hypothetical protein 4461783..4462367 Serratia proteamaculans 568 5605008 YP_001480243.1 CDS Spro_4020 NC_009832.1 4462375 4463427 D PFAM: protein of unknown function DUF182; KEGG: ppf:Pput_1633 protein of unknown function DUF182; hypothetical protein 4462375..4463427 Serratia proteamaculans 568 5605009 YP_001480244.1 CDS Spro_4021 NC_009832.1 4463351 4464217 R PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: sgl:SG0402 right origin-binding protein; AraC family transcriptional regulator complement(4463351..4464217) Serratia proteamaculans 568 5605010 YP_001480245.1 CDS Spro_4022 NC_009832.1 4464387 4466033 R TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region; KEGG: sfv:SFV_1628 fumarate hydratase class I, aerobic; tartrate/fumarate subfamily Fe-S type hydro-lyase subunit beta complement(4464387..4466033) Serratia proteamaculans 568 5603206 YP_001480246.1 CDS Spro_4023 NC_009832.1 4466404 4466916 D PFAM: protein of unknown function DUF335 SprT; SMART: protein of unknown function SprT; KEGG: yen:YE3424 hypothetical protein; hypothetical protein 4466404..4466916 Serratia proteamaculans 568 5603207 YP_001480247.1 CDS Spro_4024 NC_009832.1 4467018 4467713 D PFAM: Endonuclease I; KEGG: ypi:YpsIP31758_0839 endonuclease I; deoxyribonuclease I 4467018..4467713 Serratia proteamaculans 568 5603208 YP_001480248.1 CDS Spro_4025 NC_009832.1 4467901 4468632 D PFAM: protein of unknown function DUF558; KEGG: ecv:APECO1_3575 hypothetical protein; hypothetical protein 4467901..4468632 Serratia proteamaculans 568 5605377 YP_001480249.1 CDS Spro_4026 NC_009832.1 4468643 4469593 D catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase 4468643..4469593 Serratia proteamaculans 568 5605378 YP_001480250.1 CDS Spro_4027 NC_009832.1 4469726 4470289 D PFAM: protein of unknown function DUF179; KEGG: sgl:SG2023 hypothetical protein; hypothetical protein 4469726..4470289 Serratia proteamaculans 568 5605379 YP_001480251.1 CDS Spro_4028 NC_009832.1 4470289 4470711 D similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 4470289..4470711 Serratia proteamaculans 568 5605521 YP_001480252.1 CDS Spro_4029 NC_009832.1 4470708 4471730 R TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: eca:ECA3626 putative type II/IV secretion system protein; twitching motility protein complement(4470708..4471730) Serratia proteamaculans 568 5605522 YP_001480253.1 CDS Spro_4030 NC_009832.1 4471751 4472458 D PFAM: alanine racemase domain protein; KEGG: yps:YPTB3213 hypothetical protein; alanine racemase domain-containing protein 4471751..4472458 Serratia proteamaculans 568 5605523 YP_001480254.1 CDS Spro_4031 NC_009832.1 4472479 4473300 D catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase 4472479..4473300 Serratia proteamaculans 568 5605552 YP_001480255.1 CDS Spro_4032 NC_009832.1 4473332 4473886 D PFAM: protein of unknown function YGGT; KEGG: yen:YE3435 hypothetical protein; hypothetical protein 4473332..4473886 Serratia proteamaculans 568 5605553 YP_001480256.1 CDS Spro_4033 NC_009832.1 4473883 4474173 D PFAM: protein of unknown function DUF167; KEGG: yen:YE3436 hypothetical protein; hypothetical protein 4473883..4474173 Serratia proteamaculans 568 5605554 YP_001480257.1 CDS Spro_4034 NC_009832.1 4474191 4474784 D HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; putative deoxyribonucleotide triphosphate pyrophosphatase 4474191..4474784 Serratia proteamaculans 568 5605575 YP_001480258.1 CDS Spro_4035 NC_009832.1 4474777 4475916 D catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 4474777..4475916 Serratia proteamaculans 568 5605576 YP_001480259.1 CDS Spro_4036 NC_009832.1 4475952 4476386 R PFAM: protein of unknown function DUF29; KEGG: plu:plu2339 hypothetical protein; hypothetical protein complement(4475952..4476386) Serratia proteamaculans 568 5605577 YP_001480260.1 CDS Spro_4037 NC_009832.1 4476412 4476660 R KEGG: yen:YE3508 hypothetical protein; hypothetical protein complement(4476412..4476660) Serratia proteamaculans 568 5605757 YP_001480261.1 CDS Spro_4038 NC_009832.1 4476644 4476889 R KEGG: jan:Jann_3434 hypothetical protein; hypothetical protein complement(4476644..4476889) Serratia proteamaculans 568 5605758 YP_001480262.1 CDS Spro_4039 NC_009832.1 4476983 4477699 R KEGG: yen:YE3439 hypothetical protein; hypothetical protein complement(4476983..4477699) Serratia proteamaculans 568 5605759 YP_001480263.1 CDS Spro_4040 NC_009832.1 4477730 4478653 R catalyzes the formation of glutamate from glutamine; glutaminase complement(4477730..4478653) Serratia proteamaculans 568 5605792 YP_001480264.1 CDS Spro_4041 NC_009832.1 4478737 4479063 R PFAM: protein of unknown function DUF469; KEGG: yen:YE3441 hypothetical protein; hypothetical protein complement(4478737..4479063) Serratia proteamaculans 568 5605793 YP_001480265.1 CDS trmB NC_009832.1 4479063 4479782 R tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase complement(4479063..4479782) Serratia proteamaculans 568 5605794 YP_001480266.1 CDS Spro_4043 NC_009832.1 4479915 4481060 D KEGG: yen:YE3443 A/G-specific adenine glycosylase; TIGRFAM: A/G-specific adenine glycosylase; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; SMART: iron-sulfur cluster loop; adenine DNA glycosylase 4479915..4481060 Serratia proteamaculans 568 5606034 YP_001480267.1 CDS Spro_4044 NC_009832.1 4481057 4481329 D PFAM: Fe(II) trafficking protein YggX; KEGG: eca:ECA0975 hypothetical protein; hypothetical protein 4481057..4481329 Serratia proteamaculans 568 5606035 YP_001480268.1 CDS mltC NC_009832.1 4481385 4482461 D Murein hydrolase C; membrane-bound; lytic; catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues; murein transglycosylase C 4481385..4482461 Serratia proteamaculans 568 5606036 YP_001480269.1 CDS Spro_4046 NC_009832.1 4482509 4483621 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: asa:ASA_3304 GGDEF domain protein; diguanylate cyclase complement(4482509..4483621) Serratia proteamaculans 568 5606068 YP_001480270.1 CDS Spro_4047 NC_009832.1 4483726 4485888 R PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: ypp:YPDSF_0554 ornithine decarboxylase; ornithine decarboxylase complement(4483726..4485888) Serratia proteamaculans 568 5606069 YP_001480271.1 CDS Spro_4048 NC_009832.1 4486861 4487892 R PFAM: integrase family protein; KEGG: eca:ECA0614 putative phage integrase; integrase family protein complement(4486861..4487892) Serratia proteamaculans 568 5606658 YP_001480272.1 CDS Spro_4049 NC_009832.1 4487979 4489661 R PFAM: protein of unknown function DUF1528; Relaxase; KEGG: eca:ECA0613 hypothetical protein; relaxase complement(4487979..4489661) Serratia proteamaculans 568 5606219 YP_001480273.1 CDS Spro_4050 NC_009832.1 4489655 4491100 R KEGG: eca:ECA0611 hypothetical protein; hypothetical protein complement(4489655..4491100) Serratia proteamaculans 568 5606220 YP_001480274.1 CDS Spro_4051 NC_009832.1 4491753 4492586 D PFAM: response regulator receiver; BetR domain protein; KEGG: sec:SC042 hypothetical protein; response regulator receiver protein 4491753..4492586 Serratia proteamaculans 568 5606221 YP_001480275.1 CDS Spro_4052 NC_009832.1 4492593 4493579 D KEGG: sec:SC041 hypothetical protein; hypothetical protein 4492593..4493579 Serratia proteamaculans 568 5602873 YP_001480276.1 CDS Spro_4053 NC_009832.1 4493572 4494075 D KEGG: sec:SC040 hypothetical protein; hypothetical protein 4493572..4494075 Serratia proteamaculans 568 5602874 YP_001480277.1 CDS Spro_4054 NC_009832.1 4494141 4495784 D PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sec:SC039 hypothetical protein; histidine kinase 4494141..4495784 Serratia proteamaculans 568 5602875 YP_001480278.1 CDS Spro_4055 NC_009832.1 4495841 4496407 R KEGG: plu:plu1163 hypothetical protein; hypothetical protein complement(4495841..4496407) Serratia proteamaculans 568 5605648 YP_001480279.1 CDS Spro_4056 NC_009832.1 4496635 4497576 R PFAM: protein of unknown function DUF1281; KEGG: ypi:YpsIP31758_3689 hypothetical protein; hypothetical protein complement(4496635..4497576) Serratia proteamaculans 568 5605649 YP_001480280.1 CDS Spro_4057 NC_009832.1 4497683 4497955 R KEGG: yen:YE3459 hypothetical protein; hypothetical protein complement(4497683..4497955) Serratia proteamaculans 568 5605650 YP_001480281.1 CDS Spro_4058 NC_009832.1 4497973 4498983 R PFAM: domain of unknown function DUF1738; KEGG: yen:YE3460 hypothetical protein; hypothetical protein complement(4497973..4498983) Serratia proteamaculans 568 5603275 YP_001480282.1 CDS Spro_4059 NC_009832.1 4499057 4499659 R KEGG: stt:t4289 hypothetical protein; hypothetical protein complement(4499057..4499659) Serratia proteamaculans 568 5603276 YP_001480283.1 CDS Spro_4060 NC_009832.1 4499792 4500415 R hypothetical protein complement(4499792..4500415) Serratia proteamaculans 568 5603277 YP_001480284.1 CDS Spro_4061 NC_009832.1 4500437 4500853 R KEGG: stt:t4282 hypothetical protein; hypothetical protein complement(4500437..4500853) Serratia proteamaculans 568 5602491 YP_001480285.1 CDS Spro_4062 NC_009832.1 4501784 4502683 R KEGG: plu:plu1152 hypothetical protein; hypothetical protein complement(4501784..4502683) Serratia proteamaculans 568 5602492 YP_001480286.1 CDS Spro_4063 NC_009832.1 4503782 4504357 R hypothetical protein complement(4503782..4504357) Serratia proteamaculans 568 5602493 YP_001480287.1 CDS Spro_4064 NC_009832.1 4504695 4505105 R KEGG: stt:t4291 UV protection protein; UV protection protein complement(4504695..4505105) Serratia proteamaculans 568 5602458 YP_001480288.1 CDS Spro_4065 NC_009832.1 4505384 4506190 D TIGRFAM: HAD-superfamily subfamily IIA hydrolase like protein; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: gbe:GbCGDNIH1_1880 hydrolase (HAD superfamily); HAD family hydrolase 4505384..4506190 Serratia proteamaculans 568 5602459 YP_001480289.1 CDS Spro_4066 NC_009832.1 4506235 4507314 D KEGG: mlo:mll9370 hypothetical protein; hypothetical protein 4506235..4507314 Serratia proteamaculans 568 5602460 YP_001480290.1 CDS Spro_4067 NC_009832.1 4507307 4508680 D PFAM: aminotransferase class I and II; KEGG: bha:BH1695 aspartate aminotransferase; class I and II aminotransferase 4507307..4508680 Serratia proteamaculans 568 5604775 YP_001480291.1 CDS Spro_4068 NC_009832.1 4508690 4509931 D PFAM: protein of unknown function DUF201; KEGG: gka:GK2762 hypothetical protein; hypothetical protein 4508690..4509931 Serratia proteamaculans 568 5604776 YP_001480292.1 CDS Spro_4069 NC_009832.1 4509963 4511132 D KEGG: bca:BCE_A0170 phosphoribosylglycinamide synthetase, ATP-grasp (A) domain protein; phosphoribosylglycinamide synthetase ATP-grasp domain-containing protein 4509963..4511132 Serratia proteamaculans 568 5604777 YP_001480293.1 CDS Spro_4070 NC_009832.1 4511190 4512386 D PFAM: major facilitator superfamily MFS_1; KEGG: btk:BT9727_3150 possible membrane protein; TGF-beta receptor, type I/II extracellular region; major facilitator transporter 4511190..4512386 Serratia proteamaculans 568 5606896 YP_001480294.1 CDS Spro_4071 NC_009832.1 4513706 4515244 R KEGG: eca:ECA0580 hypothetical protein; hypothetical protein complement(4513706..4515244) Serratia proteamaculans 568 5606897 YP_001480295.1 CDS Spro_4072 NC_009832.1 4515241 4515612 R KEGG: eca:ECA0579 hypothetical protein; hypothetical protein complement(4515241..4515612) Serratia proteamaculans 568 5606898 YP_001480296.1 CDS Spro_4073 NC_009832.1 4515629 4517110 R KEGG: eca:ECA0578 hypothetical protein; hypothetical protein complement(4515629..4517110) Serratia proteamaculans 568 5606352 YP_001480297.1 CDS Spro_4074 NC_009832.1 4517121 4518128 R PFAM: protein of unknown function DUF1527; KEGG: eca:ECA0577 hypothetical protein; hypothetical protein complement(4517121..4518128) Serratia proteamaculans 568 5606353 YP_001480298.1 CDS Spro_4075 NC_009832.1 4518130 4518534 R PFAM: protein of unknown function DUF1525; KEGG: eca:ECA0576 hypothetical protein; hypothetical protein complement(4518130..4518534) Serratia proteamaculans 568 5606354 YP_001480299.1 CDS Spro_4076 NC_009832.1 4518986 4520170 R KEGG: kpn:KPN_01180 putative glycosyl transferase; putative glycosyl transferase complement(4518986..4520170) Serratia proteamaculans 568 5607033 YP_001480300.1 CDS Spro_4077 NC_009832.1 4521585 4532393 R TIGRFAM: filamentous haemagglutinin family outer membrane protein; adhesin HecA family; PFAM: Haemagluttinin repeat-containing protein; filamentous haemagglutinin domain protein; KEGG: ypi:YpsIP31758_0510 adhesin/haemagluttinin repeat protein; filamentous hemagglutinin outer membrane protein complement(4521585..4532393) Serratia proteamaculans 568 5607034 YP_001480301.1 CDS Spro_4078 NC_009832.1 4532462 4534207 R PFAM: Hemolysin activator HlyB domain protein; Polypeptide-transport-associated domain protein ShlB-type; KEGG: rso:RS02577 probable activation/secretion protein; polypeptide-transport-associated domain-containing protein complement(4532462..4534207) Serratia proteamaculans 568 5607035 YP_001480302.1 CDS Spro_4079 NC_009832.1 4534439 4534702 D PFAM: transposase IS3/IS911 family protein; KEGG: sec:SC174 hypothetical protein A; transposase IS3/IS911 family protein 4534439..4534702 Serratia proteamaculans 568 5606905 YP_001480303.1 CDS Spro_4080 NC_009832.1 4534735 4534959 D KEGG: sec:SC173 hypothetical protein B; hypothetical protein 4534735..4534959 Serratia proteamaculans 568 5606906 YP_001480304.1 CDS Spro_4081 NC_009832.1 4534928 4535560 D PFAM: Integrase catalytic region; KEGG: ypp:YPDSF_4015 hypothetical protein; Integrase catalytic subunit 4534928..4535560 Serratia proteamaculans 568 5606907 YP_001480305.1 CDS Spro_4082 NC_009832.1 4535688 4538279 D TIGRFAM: type I restriction-modification system, M subunit; PFAM: N-6 DNA methylase; KEGG: ypi:YpsIP31758_3536 type I restriction-modification system, M subunit; type I restriction-modification system, M subunit 4535688..4538279 Serratia proteamaculans 568 5606979 YP_001480306.1 CDS Spro_4083 NC_009832.1 4538281 4539510 D PFAM: restriction modification system DNA specificity domain; KEGG: shn:Shewana3_4163 restriction modification system DNA specificity domain; restriction modification system DNA specificity subunit 4538281..4539510 Serratia proteamaculans 568 5606980 YP_001480307.1 CDS Spro_4084 NC_009832.1 4539525 4542710 D KEGG: shn:Shewana3_4164 type I site-specific deoxyribonuclease, HsdR family; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: type III restriction protein res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases; HsdR family type I site-specific deoxyribonuclease 4539525..4542710 Serratia proteamaculans 568 5606981 YP_001480308.1 CDS Spro_4085 NC_009832.1 4542838 4543242 R KEGG: eca:ECA0574 hypothetical protein; hypothetical protein complement(4542838..4543242) Serratia proteamaculans 568 5607114 YP_001480309.1 CDS Spro_4086 NC_009832.1 4543239 4546103 R KEGG: eca:ECA0573 putative plasmid-related protein; putative plasmid-like protein complement(4543239..4546103) Serratia proteamaculans 568 5607115 YP_001480310.1 CDS Spro_4087 NC_009832.1 4546103 4546528 R KEGG: eca:ECA0572 putative lipoprotein; putative lipoprotein complement(4546103..4546528) Serratia proteamaculans 568 5607116 YP_001480311.1 CDS Spro_4088 NC_009832.1 4546684 4548180 R KEGG: eca:ECA0570 hypothetical protein; hypothetical protein complement(4546684..4548180) Serratia proteamaculans 568 5607121 YP_001480312.1 CDS Spro_4089 NC_009832.1 4548173 4549090 R KEGG: eca:ECA0569 hypothetical protein; hypothetical protein complement(4548173..4549090) Serratia proteamaculans 568 5607122 YP_001480313.1 CDS Spro_4090 NC_009832.1 4549087 4549758 R KEGG: eca:ECA0568 hypothetical protein; hypothetical protein complement(4549087..4549758) Serratia proteamaculans 568 5607123 YP_001480314.1 CDS Spro_4091 NC_009832.1 4549755 4550120 R KEGG: eca:ECA0567 hypothetical protein; hypothetical protein complement(4549755..4550120) Serratia proteamaculans 568 5606162 YP_001480315.1 CDS Spro_4092 NC_009832.1 4550132 4550497 R KEGG: plu:plu1080 hypothetical protein; hypothetical protein complement(4550132..4550497) Serratia proteamaculans 568 5606163 YP_001480316.1 CDS Spro_4093 NC_009832.1 4550562 4550798 R KEGG: eca:ECA0565 hypothetical protein; hypothetical protein complement(4550562..4550798) Serratia proteamaculans 568 5606164 YP_001480317.1 CDS Spro_4094 NC_009832.1 4550795 4551124 R PFAM: plasmid conserved hypothetical protein RAQPRD; KEGG: eca:ECA0564 hypothetical protein; hypothetical protein complement(4550795..4551124) Serratia proteamaculans 568 5605053 YP_001480318.1 CDS Spro_4095 NC_009832.1 4551359 4552117 R KEGG: eca:ECA0561 hypothetical protein; hypothetical protein complement(4551359..4552117) Serratia proteamaculans 568 5605054 YP_001480319.1 CDS Spro_4096 NC_009832.1 4552098 4554290 R KEGG: eca:ECA0560 putative plasmid transfer protein; putative plasmid transfer protein complement(4552098..4554290) Serratia proteamaculans 568 5605055 YP_001480320.1 CDS Spro_4097 NC_009832.1 4554719 4555345 R PFAM: restriction endonuclease; KEGG: eca:ECA0558 hypothetical protein; restriction endonuclease complement(4554719..4555345) Serratia proteamaculans 568 5602745 YP_001480321.1 CDS Spro_4098 NC_009832.1 4555342 4555866 R KEGG: eca:ECA0557 hypothetical protein; hypothetical protein complement(4555342..4555866) Serratia proteamaculans 568 5602746 YP_001480322.1 CDS Spro_4099 NC_009832.1 4555869 4556561 R PFAM: Lytic transglycosylase catalytic; KEGG: eca:ECA0556 hypothetical protein; lytic transglycosylase complement(4555869..4556561) Serratia proteamaculans 568 5602747 YP_001480323.1 CDS Spro_4100 NC_009832.1 4556540 4557250 R KEGG: eca:ECA0555 hypothetical protein; hypothetical protein complement(4556540..4557250) Serratia proteamaculans 568 5602482 YP_001480324.1 CDS Spro_4101 NC_009832.1 4557261 4558004 R KEGG: stt:t4255 hypothetical protein; hypothetical protein complement(4557261..4558004) Serratia proteamaculans 568 5602483 YP_001480325.1 CDS Spro_4102 NC_009832.1 4558001 4558621 R KEGG: pap:PSPA7_4470 type IV B pilus protein; type IV B pilus protein complement(4558001..4558621) Serratia proteamaculans 568 5602484 YP_001480326.1 CDS Spro_4103 NC_009832.1 4558768 4559004 R KEGG: acr:Acry_3623 hypothetical protein; hypothetical protein complement(4558768..4559004) Serratia proteamaculans 568 5605877 YP_001480327.1 CDS Spro_4104 NC_009832.1 4559021 4559257 R KEGG: acr:Acry_3624 hypothetical protein; hypothetical protein complement(4559021..4559257) Serratia proteamaculans 568 5605878 YP_001480328.1 CDS Spro_4105 NC_009832.1 4559273 4559818 R TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: yen:YE3844 single-strand binding protein; single-strand binding protein complement(4559273..4559818) Serratia proteamaculans 568 5605879 YP_001480329.1 CDS Spro_4106 NC_009832.1 4559890 4560357 R KEGG: plu:plu1038 hypothetical protein; hypothetical protein complement(4559890..4560357) Serratia proteamaculans 568 5602476 YP_001480330.1 CDS Spro_4107 NC_009832.1 4561072 4563111 R decatenates replicating daughter chromosomes; DNA topoisomerase III complement(4561072..4563111) Serratia proteamaculans 568 5602477 YP_001480331.1 CDS Spro_4108 NC_009832.1 4563126 4563701 R hypothetical protein complement(4563126..4563701) Serratia proteamaculans 568 5602478 YP_001480332.1 CDS Spro_4109 NC_009832.1 4563698 4564459 R PFAM: Domain of unknown function DUF1845; KEGG: plu:plu1036 hypothetical protein; hypothetical protein complement(4563698..4564459) Serratia proteamaculans 568 5602944 YP_001480333.1 CDS Spro_4110 NC_009832.1 4564752 4565999 R KEGG: plu:plu1035 hypothetical protein; hypothetical protein complement(4564752..4565999) Serratia proteamaculans 568 5602945 YP_001480334.1 CDS Spro_4111 NC_009832.1 4566134 4566238 R KEGG: eca:ECA0522A hypothetical protein; hypothetical protein complement(4566134..4566238) Serratia proteamaculans 568 5602946 YP_001480335.1 CDS Spro_4112 NC_009832.1 4566394 4567023 R KEGG: plu:plu1034 hypothetical protein; hypothetical protein complement(4566394..4567023) Serratia proteamaculans 568 5602893 YP_001480336.1 CDS Spro_4113 NC_009832.1 4567028 4567747 R KEGG: eca:ECA0552 hypothetical protein; hypothetical protein complement(4567028..4567747) Serratia proteamaculans 568 5602894 YP_001480337.1 CDS Spro_4114 NC_009832.1 4567747 4569492 R KEGG: stt:t4228 hypothetical protein; hypothetical protein complement(4567747..4569492) Serratia proteamaculans 568 5602895 YP_001480338.1 CDS Spro_4115 NC_009832.1 4569495 4570850 R TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; KEGG: plu:plu1031 unnamed protein product; similar to DNA helicase; replicative DNA helicase complement(4569495..4570850) Serratia proteamaculans 568 5602695 YP_001480339.1 CDS Spro_4116 NC_009832.1 4570847 4571773 R KEGG: eca:ECA0516 hypothetical protein; hypothetical protein complement(4570847..4571773) Serratia proteamaculans 568 5602696 YP_001480340.1 CDS Spro_4117 NC_009832.1 4572097 4573110 R PFAM: integrase family protein; KEGG: plu:plu1166 hypothetical protein; integrase family protein complement(4572097..4573110) Serratia proteamaculans 568 5602697 YP_001480341.1 CDS Spro_4118 NC_009832.1 4573178 4574887 R PFAM: protein of unknown function DUF1528; Relaxase; KEGG: plu:plu1165 hypothetical protein; relaxase complement(4573178..4574887) Serratia proteamaculans 568 5602821 YP_001480342.1 CDS Spro_4119 NC_009832.1 4575504 4576154 R PFAM: regulatory protein LuxR; KEGG: asa:ASA_P5G023 hypothetical protein; LuxR family transcriptional regulator complement(4575504..4576154) Serratia proteamaculans 568 5602822 YP_001480343.1 CDS Spro_4120 NC_009832.1 4576453 4577205 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ypi:YpsIP31758_2523 oxidoreductase, short chain dehydrogenase/reductase family protein; short-chain dehydrogenase/reductase SDR 4576453..4577205 Serratia proteamaculans 568 5602823 YP_001480344.1 CDS Spro_4121 NC_009832.1 4577486 4578409 R PFAM: protein of unknown function DUF1281; KEGG: ypi:YpsIP31758_3689 hypothetical protein; hypothetical protein complement(4577486..4578409) Serratia proteamaculans 568 5605023 YP_001480345.1 CDS Spro_4122 NC_009832.1 4578526 4578792 R KEGG: yen:YE3459 hypothetical protein; hypothetical protein complement(4578526..4578792) Serratia proteamaculans 568 5605024 YP_001480346.1 CDS Spro_4123 NC_009832.1 4578801 4579808 R PFAM: domain of unknown function DUF1738; KEGG: yen:YE3460 hypothetical protein; hypothetical protein complement(4578801..4579808) Serratia proteamaculans 568 5605025 YP_001480347.1 CDS Spro_4124 NC_009832.1 4579882 4580484 R KEGG: stt:t4289 hypothetical protein; hypothetical protein complement(4579882..4580484) Serratia proteamaculans 568 5604997 YP_001480348.1 CDS Spro_4125 NC_009832.1 4580598 4580957 R hypothetical protein complement(4580598..4580957) Serratia proteamaculans 568 5604998 YP_001480349.1 CDS Spro_4126 NC_009832.1 4582056 4582310 D PFAM: helix-turn-helix domain protein; KEGG: yen:YE3496A putative DNA-binding protein; XRE family transcriptional regulator 4582056..4582310 Serratia proteamaculans 568 5604999 YP_001480350.1 CDS Spro_4127 NC_009832.1 4582470 4583357 R KEGG: plu:plu1152 hypothetical protein; hypothetical protein complement(4582470..4583357) Serratia proteamaculans 568 5604571 YP_001480351.1 CDS Spro_4128 NC_009832.1 4584414 4584722 R hypothetical protein complement(4584414..4584722) Serratia proteamaculans 568 5604572 YP_001480352.1 CDS Spro_4129 NC_009832.1 4585117 4585440 D KEGG: ypk:y2721 hypothetical protein; hypothetical protein 4585117..4585440 Serratia proteamaculans 568 5604573 YP_001480353.1 CDS Spro_4131 NC_009832.1 4586110 4586943 D PFAM: ThiJ/PfpI domain protein; KEGG: plu:plu3545 hypothetical protein; ThiJ/PfpI domain-containing protein 4586110..4586943 Serratia proteamaculans 568 5602940 YP_001480354.1 CDS Spro_4132 NC_009832.1 4587411 4587620 D KEGG: vpa:VP2147 hypothetical protein; hypothetical protein 4587411..4587620 Serratia proteamaculans 568 5604599 YP_001480355.1 CDS Spro_4133 NC_009832.1 4587744 4588190 R hypothetical protein complement(4587744..4588190) Serratia proteamaculans 568 5604600 YP_001480356.1 CDS Spro_4134 NC_009832.1 4588192 4588995 R PFAM: transcriptional regulator domain protein; KEGG: eca:ECA0944 hypothetical protein; transcriptional regulator CadC complement(4588192..4588995) Serratia proteamaculans 568 5604363 YP_001480357.1 CDS Spro_4135 NC_009832.1 4589452 4589856 D KEGG: yen:YE3563 hypothetical protein; putative transcriptional regulator CadC 4589452..4589856 Serratia proteamaculans 568 5604364 YP_001480358.1 CDS Spro_4136 NC_009832.1 4590036 4590293 R hypothetical protein complement(4590036..4590293) Serratia proteamaculans 568 5604365 YP_001480359.1 CDS Spro_4137 NC_009832.1 4590820 4591614 R hypothetical protein complement(4590820..4591614) Serratia proteamaculans 568 5604345 YP_001480360.1 CDS Spro_4138 NC_009832.1 4593443 4594420 R KEGG: plt:Plut_0869 hypothetical protein; hypothetical protein complement(4593443..4594420) Serratia proteamaculans 568 5604346 YP_001480361.1 CDS Spro_4139 NC_009832.1 4594582 4595124 R PFAM: Fimbrial protein; KEGG: plu:plu0776 MrfG protein; fimbrial protein complement(4594582..4595124) Serratia proteamaculans 568 5604347 YP_001480362.1 CDS Spro_4140 NC_009832.1 4595134 4595562 R KEGG: plu:plu0775 MrfF protein; MrfF protein complement(4595134..4595562) Serratia proteamaculans 568 5603811 YP_001480363.1 CDS Spro_4141 NC_009832.1 4595646 4596146 R PFAM: Fimbrial protein; KEGG: plu:plu0774 MrfE protein; fimbrial protein complement(4595646..4596146) Serratia proteamaculans 568 5603812 YP_001480364.1 CDS Spro_4142 NC_009832.1 4596157 4596669 R KEGG: plu:plu0774 MrfE protein; MrfE protein complement(4596157..4596669) Serratia proteamaculans 568 5603813 YP_001480365.1 CDS Spro_4143 NC_009832.1 4596681 4597157 R PFAM: Fimbrial protein; KEGG: plu:plu0774 MrfE protein; fimbrial protein complement(4596681..4597157) Serratia proteamaculans 568 5603746 YP_001480366.1 CDS Spro_4144 NC_009832.1 4597207 4597875 R PFAM: Fimbrial protein; KEGG: plu:plu0773 MrfX protein; fimbrial protein complement(4597207..4597875) Serratia proteamaculans 568 5603747 YP_001480367.1 CDS Spro_4145 NC_009832.1 4597920 4598675 R PFAM: pili assembly chaperone; KEGG: yen:YE0782 pili chaperone protein; pili assembly chaperone complement(4597920..4598675) Serratia proteamaculans 568 5603748 YP_001480368.1 CDS Spro_4146 NC_009832.1 4598672 4601212 R PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: plu:plu0416 hypothetical protein; fimbrial biogenesis outer membrane usher protein complement(4598672..4601212) Serratia proteamaculans 568 5603705 YP_001480369.1 CDS Spro_4147 NC_009832.1 4601235 4601777 R PFAM: Fimbrial protein; KEGG: plu:plu0770 MrfB protein; fimbrial protein complement(4601235..4601777) Serratia proteamaculans 568 5603706 YP_001480370.1 CDS Spro_4148 NC_009832.1 4601864 4602403 R PFAM: Fimbrial protein; KEGG: ent:Ent638_0401 fimbrial protein; fimbrial protein complement(4601864..4602403) Serratia proteamaculans 568 5603707 YP_001480371.1 CDS Spro_4149 NC_009832.1 4603091 4603393 D KEGG: plu:plu3508 hypothetical protein; hypothetical protein 4603091..4603393 Serratia proteamaculans 568 5602573 YP_001480372.1 CDS Spro_4150 NC_009832.1 4603529 4604218 D PFAM: regulatory protein LuxR; KEGG: pol:Bpro_4296 two component transcriptional regulator, LuxR family; LuxR family transcriptional regulator 4603529..4604218 Serratia proteamaculans 568 5602574 YP_001480373.1 CDS Spro_4151 NC_009832.1 4604205 4604603 D KEGG: kpn:KPN_00129 hypothetical protein; hypothetical protein 4604205..4604603 Serratia proteamaculans 568 5602575 YP_001480374.1 CDS Spro_4152 NC_009832.1 4604600 4606216 D PFAM: FKBP-type peptidyl-prolyl isomerase domain protein; peptidylprolyl isomerase FKBP-type; KEGG: kpn:KPN_00128 hypothetical protein; FKBP-type peptidyl-prolyl isomerase domain-containing protein 4604600..4606216 Serratia proteamaculans 568 5602514 YP_001480375.1 CDS Spro_4153 NC_009832.1 4606845 4607429 D PFAM: Fimbrial protein; KEGG: plu:plu0507 hypothetical protein; fimbrial protein 4606845..4607429 Serratia proteamaculans 568 5602515 YP_001480376.1 CDS Spro_4154 NC_009832.1 4607479 4608174 D PFAM: pili assembly chaperone; KEGG: plu:plu0506 hypothetical protein; pili assembly chaperone 4607479..4608174 Serratia proteamaculans 568 5602516 YP_001480377.1 CDS Spro_4155 NC_009832.1 4608190 4610700 D PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: plu:plu0505 hypothetical protein; fimbrial biogenesis outer membrane usher protein 4608190..4610700 Serratia proteamaculans 568 5602973 YP_001480378.1 CDS Spro_4156 NC_009832.1 4610722 4611789 D KEGG: plu:plu0504 hypothetical protein; hypothetical protein 4610722..4611789 Serratia proteamaculans 568 5602974 YP_001480379.1 CDS Spro_4157 NC_009832.1 4611843 4612373 D hypothetical protein 4611843..4612373 Serratia proteamaculans 568 5602975 YP_001480380.1 CDS Spro_4158 NC_009832.1 4613481 4613888 R hypothetical protein complement(4613481..4613888) Serratia proteamaculans 568 5606441 YP_001480381.1 CDS Spro_4159 NC_009832.1 4614400 4615251 R PFAM: Integrase catalytic region; KEGG: psa:PST_1859 transposase, IS3 family; Integrase catalytic subunit complement(4614400..4615251) Serratia proteamaculans 568 5606442 YP_001480382.1 CDS Spro_4160 NC_009832.1 4615272 4615550 R PFAM: transposase IS3/IS911 family protein; KEGG: psa:PST_3402 ISxac3 transposase; transposase IS3/IS911 family protein complement(4615272..4615550) Serratia proteamaculans 568 5606443 YP_001480383.1 CDS Spro_4161 NC_009832.1 4615842 4617365 R KEGG: eca:ECA0580 hypothetical protein; hypothetical protein complement(4615842..4617365) Serratia proteamaculans 568 5606959 YP_001480384.1 CDS Spro_4162 NC_009832.1 4617362 4617733 R KEGG: eca:ECA0579 hypothetical protein; hypothetical protein complement(4617362..4617733) Serratia proteamaculans 568 5606960 YP_001480385.1 CDS Spro_4163 NC_009832.1 4617751 4619235 R KEGG: eca:ECA0578 hypothetical protein; hypothetical protein complement(4617751..4619235) Serratia proteamaculans 568 5606961 YP_001480386.1 CDS Spro_4164 NC_009832.1 4619246 4620253 R PFAM: protein of unknown function DUF1527; KEGG: eca:ECA0577 hypothetical protein; hypothetical protein complement(4619246..4620253) Serratia proteamaculans 568 5603403 YP_001480387.1 CDS Spro_4165 NC_009832.1 4620255 4620659 R PFAM: protein of unknown function DUF1525; KEGG: eca:ECA0576 hypothetical protein; hypothetical protein complement(4620255..4620659) Serratia proteamaculans 568 5603404 YP_001480388.1 CDS Spro_4166 NC_009832.1 4620781 4621713 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: kpn:KPN_02993 putative transcriptional regulator (LysR family); LysR family transcriptional regulator complement(4620781..4621713) Serratia proteamaculans 568 5603405 YP_001480389.1 CDS Spro_4167 NC_009832.1 4621797 4622423 D PFAM: NAD(P)H dehydrogenase (quinone); KEGG: kpn:KPN_02994 acyl carrier protein phosphodiesterase; NAD(P)H dehydrogenase (quinone) 4621797..4622423 Serratia proteamaculans 568 5606013 YP_001480390.1 CDS Spro_4168 NC_009832.1 4622661 4623065 R KEGG: eca:ECA0574 hypothetical protein; hypothetical protein complement(4622661..4623065) Serratia proteamaculans 568 5606014 YP_001480391.1 CDS Spro_4169 NC_009832.1 4623062 4625926 R KEGG: eca:ECA0573 putative plasmid-related protein; putative plasmid-like protein complement(4623062..4625926) Serratia proteamaculans 568 5606015 YP_001480392.1 CDS Spro_4170 NC_009832.1 4625926 4626351 R KEGG: eca:ECA0572 putative lipoprotein; putative lipoprotein complement(4625926..4626351) Serratia proteamaculans 568 5603305 YP_001480393.1 CDS Spro_4171 NC_009832.1 4626507 4628003 R KEGG: eca:ECA0570 hypothetical protein; hypothetical protein complement(4626507..4628003) Serratia proteamaculans 568 5603306 YP_001480394.1 CDS Spro_4172 NC_009832.1 4627996 4628907 R KEGG: eca:ECA0569 hypothetical protein; hypothetical protein complement(4627996..4628907) Serratia proteamaculans 568 5603307 YP_001480395.1 CDS Spro_4173 NC_009832.1 4628904 4629575 R KEGG: eca:ECA0568 hypothetical protein; hypothetical protein complement(4628904..4629575) Serratia proteamaculans 568 5605836 YP_001480396.1 CDS Spro_4174 NC_009832.1 4629572 4629937 R KEGG: eca:ECA0567 hypothetical protein; hypothetical protein complement(4629572..4629937) Serratia proteamaculans 568 5605837 YP_001480397.1 CDS Spro_4175 NC_009832.1 4629949 4630314 R KEGG: plu:plu1080 hypothetical protein; hypothetical protein complement(4629949..4630314) Serratia proteamaculans 568 5605838 YP_001480398.1 CDS Spro_4176 NC_009832.1 4630383 4630625 R KEGG: eca:ECA0565 hypothetical protein; hypothetical protein complement(4630383..4630625) Serratia proteamaculans 568 5603299 YP_001480399.1 CDS Spro_4177 NC_009832.1 4630625 4630954 R PFAM: plasmid conserved hypothetical protein RAQPRD; KEGG: eca:ECA0564 hypothetical protein; hypothetical protein complement(4630625..4630954) Serratia proteamaculans 568 5603300 YP_001480400.1 CDS Spro_4178 NC_009832.1 4631722 4632480 R KEGG: eca:ECA0561 hypothetical protein; hypothetical protein complement(4631722..4632480) Serratia proteamaculans 568 5603301 YP_001480401.1 CDS Spro_4179 NC_009832.1 4632461 4634575 R KEGG: eca:ECA0560 putative plasmid transfer protein; putative plasmid transfer protein complement(4632461..4634575) Serratia proteamaculans 568 5605336 YP_001480402.1 CDS Spro_4180 NC_009832.1 4634572 4635162 R PFAM: restriction endonuclease; KEGG: eca:ECA0558 hypothetical protein; restriction endonuclease complement(4634572..4635162) Serratia proteamaculans 568 5605337 YP_001480403.1 CDS Spro_4181 NC_009832.1 4635159 4635683 R KEGG: eca:ECA0557 hypothetical protein; hypothetical protein complement(4635159..4635683) Serratia proteamaculans 568 5605338 YP_001480404.1 CDS Spro_4182 NC_009832.1 4635686 4636378 R PFAM: Lytic transglycosylase catalytic; KEGG: eca:ECA0556 hypothetical protein; lytic transglycosylase complement(4635686..4636378) Serratia proteamaculans 568 5605199 YP_001480405.1 CDS Spro_4183 NC_009832.1 4636357 4637067 R KEGG: eca:ECA0555 hypothetical protein; hypothetical protein complement(4636357..4637067) Serratia proteamaculans 568 5605200 YP_001480406.1 CDS Spro_4184 NC_009832.1 4637078 4637833 R KEGG: stt:t4255 hypothetical protein; hypothetical protein complement(4637078..4637833) Serratia proteamaculans 568 5605201 YP_001480407.1 CDS Spro_4185 NC_009832.1 4637858 4638409 D KEGG: xac:XAC3619 hypothetical protein; hypothetical protein 4637858..4638409 Serratia proteamaculans 568 5605184 YP_001480408.1 CDS Spro_4186 NC_009832.1 4638473 4638796 R hypothetical protein complement(4638473..4638796) Serratia proteamaculans 568 5605185 YP_001480409.1 CDS Spro_4187 NC_009832.1 4638808 4641117 R PFAM: Rhs element Vgr protein; KEGG: bbr:BB0793 hypothetical protein; Rhs element Vgr protein complement(4638808..4641117) Serratia proteamaculans 568 5605186 YP_001480410.1 CDS Spro_4188 NC_009832.1 4641164 4641556 R KEGG: bpa:BPP0711 hypothetical protein; hypothetical protein complement(4641164..4641556) Serratia proteamaculans 568 5605127 YP_001480411.1 CDS Spro_4189 NC_009832.1 4641567 4642172 R KEGG: bbr:BB0806 hypothetical protein; hypothetical protein complement(4641567..4642172) Serratia proteamaculans 568 5605128 YP_001480412.1 CDS Spro_4190 NC_009832.1 4642182 4643252 R PFAM: pentapeptide repeat protein; KEGG: bbr:BB0796 hypothetical protein; pentapeptide repeat-containing protein complement(4642182..4643252) Serratia proteamaculans 568 5605129 YP_001480413.1 CDS Spro_4191 NC_009832.1 4643249 4645783 R PFAM: pentapeptide repeat protein; KEGG: bbr:BB0795 hypothetical protein; pentapeptide repeat-containing protein complement(4643249..4645783) Serratia proteamaculans 568 5604966 YP_001480414.1 CDS Spro_4192 NC_009832.1 4646731 4647141 D PFAM: GCN5-related N-acetyltransferase; KEGG: yen:YE0513 putative acetyltransferase; GCN5-like N-acetyltransferase 4646731..4647141 Serratia proteamaculans 568 5604967 YP_001480415.1 CDS Spro_4193 NC_009832.1 4647167 4647856 D PFAM: regulatory protein LuxR; KEGG: yen:YE0514 putative transcriptional regulator; LuxR family transcriptional regulator 4647167..4647856 Serratia proteamaculans 568 5604968 YP_001480416.1 CDS Spro_4194 NC_009832.1 4647876 4649171 D PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: yen:YE0515 putative permease; cytosine/purines uracil thiamine allantoin permease 4647876..4649171 Serratia proteamaculans 568 5604595 YP_001480417.1 CDS Spro_4195 NC_009832.1 4649719 4650333 D SMART: helix-turn-helix domain protein; KEGG: plu:plu1490 hypothetical protein; XRE family transcriptional regulator 4649719..4650333 Serratia proteamaculans 568 5604596 YP_001480418.1 CDS Spro_4196 NC_009832.1 4650334 4651230 D TIGRFAM: conserved hypothetical integral membrane protein; PFAM: protein of unknown function DUF165; KEGG: plu:plu1489 hypothetical protein; hypothetical protein 4650334..4651230 Serratia proteamaculans 568 5604597 YP_001480419.1 CDS queF NC_009832.1 4651208 4652050 D catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 4651208..4652050 Serratia proteamaculans 568 5604654 YP_001480420.1 CDS Spro_4198 NC_009832.1 4652173 4654320 D PFAM: phosphoesterase; protein of unknown function DUF756; KEGG: pfl:PFL_3126 phospholipase C; phospholipase C 4652173..4654320 Serratia proteamaculans 568 5604655 YP_001480421.1 CDS Spro_4199 NC_009832.1 4654357 4655253 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: plu:plu3727 putative transcriptional regulator AbgR; putative DNA-binding transcriptional regulator complement(4654357..4655253) Serratia proteamaculans 568 5604656 YP_001480422.1 CDS Spro_4200 NC_009832.1 4655525 4656841 D TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: plu:plu3726 aminobenzoyl-glutamate utilization protein A; amidohydrolase 4655525..4656841 Serratia proteamaculans 568 5602782 YP_001480423.1 CDS Spro_4201 NC_009832.1 4656838 4658289 D TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: plu:plu3725 aminobenzoyl-glutamate utilization protein B; amidohydrolase 4656838..4658289 Serratia proteamaculans 568 5602783 YP_001480424.1 CDS abgT NC_009832.1 4658394 4659920 D PFAM: AbgT putative transporter; KEGG: plu:plu3724 aminobenzoyl-glutamate transport protein; putative aminobenzoyl-glutamate transporter 4658394..4659920 Serratia proteamaculans 568 5602784 YP_001480425.1 CDS Spro_4203 NC_009832.1 4660097 4661026 D phosphorylates aminoimidazole ribotide (AIR) which forms 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate (HMP-P); synthesis of HMP-P from AIR is complex and requires the product of thiC gene at least; aminoimidazole riboside kinase 4660097..4661026 Serratia proteamaculans 568 5604702 YP_001480426.1 CDS Spro_4204 NC_009832.1 4661242 4662651 D KEGG: plu:plu1882 hypothetical protein; hypothetical protein 4661242..4662651 Serratia proteamaculans 568 5604703 YP_001480427.1 CDS Spro_4205 NC_009832.1 4662717 4664087 D TIGRFAM: PTS system, sucrose-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system PTS EIIB protein; phosphotransferase system EIIC; KEGG: yen:YE0552 PTS system, sucrose-specific IIBC component; PTS system sucrose-specific transporter subunit IIBC 4662717..4664087 Serratia proteamaculans 568 5604704 YP_001480428.1 CDS Spro_4206 NC_009832.1 4664087 4665496 D KEGG: yen:YE0551 sucrose-6-phosphate hydrolase; TIGRFAM: sucrose-6-phosphate hydrolase; PFAM: Glycosyl hydrolase family 32 domain protein; SMART: glycoside hydrolase family 32; sucrose-6-phosphate hydrolase 4664087..4665496 Serratia proteamaculans 568 5604545 YP_001480429.1 CDS Spro_4207 NC_009832.1 4665518 4666561 D KEGG: yen:YE0550A sucrose operon repressor; TIGRFAM: D-fructose-responsive transcription factor; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; LacI family transcription regulator 4665518..4666561 Serratia proteamaculans 568 5604546 YP_001480430.1 CDS Spro_4208 NC_009832.1 4666714 4667007 R PFAM: plasmid stabilization system; KEGG: plu:plu4282 hypothetical protein; plasmid stabilization system protein complement(4666714..4667007) Serratia proteamaculans 568 5604547 YP_001480431.1 CDS Spro_4209 NC_009832.1 4667007 4667267 R TIGRFAM: putative addiction module antidote protein, CC2985 family; PFAM: protein of unknown function UPF0156; KEGG: plu:plu4283 hypothetical protein; CopG/Arc/MetJ family addiction module antidote protein complement(4667007..4667267) Serratia proteamaculans 568 5604587 YP_001480432.1 CDS Spro_4210 NC_009832.1 4667396 4667824 R TIGRFAM: TonB system transport protein ExbD type-1; PFAM: Biopolymer transport protein ExbD/TolR; KEGG: plu:plu3940 biopolymer transport protein ExbD; TonB system transport protein ExbD type-1 complement(4667396..4667824) Serratia proteamaculans 568 5604588 YP_001480433.1 CDS Spro_4211 NC_009832.1 4667828 4668799 R TIGRFAM: TonB-system energizer ExbB type-1; PFAM: MotA/TolQ/ExbB proton channel; KEGG: ypm:YP_2997 TonB complex protein; TonB-system energizer ExbB type-1 complement(4667828..4668799) Serratia proteamaculans 568 5604589 YP_001480434.1 CDS Spro_4212 NC_009832.1 4669055 4670251 D catalyzes the formation of L-homocysteine from cystathionine; cystathionine beta-lyase 4669055..4670251 Serratia proteamaculans 568 5604387 YP_001480435.1 CDS Spro_4213 NC_009832.1 4670405 4671067 D PFAM: SNARE associated Golgi protein; KEGG: ypi:YpsIP31758_0589 hypothetical protein; hypothetical protein 4670405..4671067 Serratia proteamaculans 568 5604388 YP_001480436.1 CDS Spro_4214 NC_009832.1 4671106 4672023 R PFAM: helix-turn-helix- domain containing protein AraC type; AraC-type transcriptional regulator domain protein; KEGG: yen:YE3649 AraC-family regulatory protein; AraC family transcriptional regulator complement(4671106..4672023) Serratia proteamaculans 568 5604389 YP_001480437.1 CDS Spro_4215 NC_009832.1 4672217 4673380 D PFAM: iron-containing alcohol dehydrogenase; KEGG: eca:ECA0350 putative iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 4672217..4673380 Serratia proteamaculans 568 5603574 YP_001480438.1 CDS dkgA NC_009832.1 4673583 4674407 D methylglyoxal reductase/#-keto ester reductase; catalyzes the reduction of 2,5-diketo-D-gluconic acid to 2-keto-L-gulonic acid; also catalyzes the reduction of methylglyoxal, ethyl-2-methylacetoacetate and ethyl-acetoacetate; 2,5-diketo-D-gluconate reductase A 4673583..4674407 Serratia proteamaculans 568 5603575 YP_001480439.1 CDS Spro_4217 NC_009832.1 4674459 4675097 R PFAM: cytoplasmic chaperone TorD family protein; KEGG: ppr:PBPRA1494 putative torD protein; cytoplasmic chaperone TorD family protein complement(4674459..4675097) Serratia proteamaculans 568 5603576 YP_001480440.1 CDS Spro_4218 NC_009832.1 4675084 4677597 R KEGG: ppr:PBPRA1495 putative trimethylamine-N-oxide reductase 1 precursor; TIGRFAM: molybdopterin guanine dinucleotide-containing S/N-oxide reductase; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin guanine dinucleotide-containing S/N-oxide reductase complement(4675084..4677597) Serratia proteamaculans 568 5603532 YP_001480441.1 CDS Spro_4219 NC_009832.1 4677612 4678691 R PFAM: NapC/NirT cytochrome c domain protein; KEGG: ecv:APECO1_89 cytochrome c-type protein TorC; NapC/NirT cytochrome c domain-containing protein complement(4677612..4678691) Serratia proteamaculans 568 5603533 YP_001480442.1 CDS Spro_4220 NC_009832.1 4678925 4680421 D PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: pap:PSPA7_3030 transcriptional regulator, GntR family, with aminotransferase domain; transcriptional regulator 4678925..4680421 Serratia proteamaculans 568 5603534 YP_001480443.1 CDS Spro_4221 NC_009832.1 4680442 4681845 R PFAM: glycoside hydrolase family 1; KEGG: kpn:KPN_01961 6-phospho-beta-glucosidase A; beta-glucosidase complement(4680442..4681845) Serratia proteamaculans 568 5603175 YP_001480444.1 CDS Spro_4222 NC_009832.1 4681842 4682171 R PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit; KEGG: vfi:VF0607 PTS system, diacetylchitobiose-specific IIA component; PTS system lactose/cellobiose-specific transporter subunit IIA complement(4681842..4682171) Serratia proteamaculans 568 5603176 YP_001480445.1 CDS Spro_4223 NC_009832.1 4682168 4683487 R KEGG: ent:Ent638_0526 PTS system, lactose/cellobiose family IIC subunit; TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system EIIC; PTS system lactose/cellobiose family transporter subunit IIC complement(4682168..4683487) Serratia proteamaculans 568 5603177 YP_001480446.1 CDS Spro_4224 NC_009832.1 4683573 4683884 R PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: eca:ECA4435 pts system, IIb component; PTS system lactose/cellobiose-specific transporter subunit IIB complement(4683573..4683884) Serratia proteamaculans 568 5602788 YP_001480447.1 CDS Spro_4225 NC_009832.1 4684029 4684916 R PFAM: Aldose 1-epimerase; KEGG: ecj:JW2528 conserved hypothetical protein; aldose 1-epimerase complement(4684029..4684916) Serratia proteamaculans 568 5602789 YP_001480448.1 CDS Spro_4226 NC_009832.1 4684931 4685989 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ssn:SSON_2628 putative oxidoreductase; alcohol dehydrogenase complement(4684931..4685989) Serratia proteamaculans 568 5602790 YP_001480449.1 CDS Spro_4227 NC_009832.1 4686037 4687017 R PFAM: inner-membrane translocator; KEGG: sbo:SBO_2572 putative transport system permease protein; monosaccharide-transporting ATPase complement(4686037..4687017) Serratia proteamaculans 568 5602631 YP_001480450.1 CDS Spro_4228 NC_009832.1 4687054 4688592 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sfv:SFV_2595 putative ATP-binding component of a transport system; ABC transporter-like protein complement(4687054..4688592) Serratia proteamaculans 568 5602632 YP_001480451.1 CDS Spro_4229 NC_009832.1 4688592 4689575 R PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: ecc:c3070 ABC transporter Periplasmic binding protein yphF precursor; periplasmic binding protein/LacI transcriptional regulator complement(4688592..4689575) Serratia proteamaculans 568 5602633 YP_001480452.1 CDS Spro_4230 NC_009832.1 4689739 4691142 R KEGG: kpn:KPN_02872 putative general substrate transporter; TIGRFAM: sugar transporter; PFAM: General substrate transporter; major facilitator superfamily MFS_1; sugar transporter complement(4689739..4691142) Serratia proteamaculans 568 5604525 YP_001480453.1 CDS Spro_4231 NC_009832.1 4691179 4694469 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ecv:APECO1_3982 hypothetical protein; TPR repeat-containing protein complement(4691179..4694469) Serratia proteamaculans 568 5604526 YP_001480454.1 CDS Spro_4232 NC_009832.1 4694577 4695779 D PFAM: ROK family protein; KEGG: sdy:SDY_2740 putative NAGC-like transcriptional regulator; ROK family protein 4694577..4695779 Serratia proteamaculans 568 5604527 YP_001480455.1 CDS Spro_4233 NC_009832.1 4695776 4696423 D PFAM: Lytic transglycosylase catalytic; KEGG: yps:YPTB2346 putative membrane-bound lytic murein transglycosylase; lytic transglycosylase 4695776..4696423 Serratia proteamaculans 568 5603979 YP_001480456.1 CDS Spro_4234 NC_009832.1 4696486 4698651 R PFAM: Radical SAM domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: yen:YE3653 hypothetical protein; hypothetical protein complement(4696486..4698651) Serratia proteamaculans 568 5603980 YP_001480457.1 CDS Spro_4235 NC_009832.1 4699316 4699777 D PFAM: integrase family protein; KEGG: plu:plu0768 MrfI protein; integrase family protein 4699316..4699777 Serratia proteamaculans 568 5603981 YP_001480458.1 CDS Spro_4236 NC_009832.1 4700000 4700857 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bte:BTH_I2369 transcriptional regulator, AraC family domain protein; AraC family transcriptional regulator 4700000..4700857 Serratia proteamaculans 568 5602734 YP_001480459.1 CDS Spro_4237 NC_009832.1 4700871 4702301 R KEGG: bxe:Bxe_A4151 hypothetical protein; hypothetical protein complement(4700871..4702301) Serratia proteamaculans 568 5602735 YP_001480460.1 CDS Spro_4238 NC_009832.1 4702376 4702906 R PFAM: cytochrome B561; KEGG: ppr:PBPRB0313 hypothetical protein; cytochrome B561 complement(4702376..4702906) Serratia proteamaculans 568 5602736 YP_001480461.1 CDS Spro_4239 NC_009832.1 4702973 4704388 R GbpA; plays a role mediating bacterial attachment and colonization of zooplankton and/or intestinal epithelium; in Vibrio cholerae this protein probably binds directly N-acetylglucosamine residues in chitin, glycoproteins and lipids on intestinal epithelial cells; N-acetylglucosamine-binding protein A complement(4702973..4704388) Serratia proteamaculans 568 5602867 YP_001480462.1 CDS Spro_4240 NC_009832.1 4704643 4705026 D KEGG: eca:ECA3114 general secretion pathway lipoprotein; general secretion pathway lipoprotein 4704643..4705026 Serratia proteamaculans 568 5602868 YP_001480463.1 CDS Spro_4241 NC_009832.1 4705029 4705892 R PFAM: peptidase A24A prepilin type IV; peptidase A24A domain protein; KEGG: asa:ASA_0411 type IV prepilin peptidase TapD; prepilin peptidase complement(4705029..4705892) Serratia proteamaculans 568 5602869 YP_001480464.1 CDS Spro_4242 NC_009832.1 4705908 4706360 R hypothetical protein complement(4705908..4706360) Serratia proteamaculans 568 5603020 YP_001480465.1 CDS Spro_4243 NC_009832.1 4706357 4707451 R PFAM: General secretion pathway L; KEGG: spc:Sputcn32_3559 general secretion pathway protein L; general secretion pathway L complement(4706357..4707451) Serratia proteamaculans 568 5603021 YP_001480466.1 CDS Spro_4244 NC_009832.1 4707448 4708404 R PFAM: General secretion pathway protein K; KEGG: eca:ECA3102 general secretion pathway protein K; general secretion pathway protein K complement(4707448..4708404) Serratia proteamaculans 568 5603022 YP_001480467.1 CDS Spro_4245 NC_009832.1 4708401 4708994 R TIGRFAM: general secretion pathway protein J; KEGG: yen:YE3570a putative general secretion pathway protein J precursor; general secretion pathway protein J complement(4708401..4708994) Serratia proteamaculans 568 5606827 YP_001480468.1 CDS Spro_4246 NC_009832.1 4708981 4709361 R TIGRFAM: general secretion pathway protein I; PFAM: type II secretion system protein I/J; KEGG: yen:YE3570 general secretion pathway protein I precursor; general secretion pathway protein I complement(4708981..4709361) Serratia proteamaculans 568 5606828 YP_001480469.1 CDS Spro_4247 NC_009832.1 4709342 4709875 R TIGRFAM: general secretion pathway protein H; KEGG: asa:ASA_3779 general secretion pathway protein H; general secretion pathway protein H complement(4709342..4709875) Serratia proteamaculans 568 5606829 YP_001480470.1 CDS Spro_4248 NC_009832.1 4709865 4710311 R TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: eca:ECA3106 general secretion pathway protein G; general secretion pathway protein G complement(4709865..4710311) Serratia proteamaculans 568 5603511 YP_001480471.1 CDS Spro_4249 NC_009832.1 4710316 4711527 R TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; KEGG: eca:ECA3107 general secretion pathway protein F; general secretion pathway protein F complement(4710316..4711527) Serratia proteamaculans 568 5603512 YP_001480472.1 CDS Spro_4250 NC_009832.1 4711517 4713001 R KEGG: aha:AHA_0570 general secretory pathway protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase; general secretory pathway protein E complement(4711517..4713001) Serratia proteamaculans 568 5603513 YP_001480473.1 CDS Spro_4251 NC_009832.1 4712998 4714980 R TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: kpn:KPN_00160 pullulanase D protein; general secretion pathway protein D complement(4712998..4714980) Serratia proteamaculans 568 5606394 YP_001480474.1 CDS Spro_4252 NC_009832.1 4715029 4715562 R KEGG: yen:YE3564 general secretion pathway protein C; hypothetical protein complement(4715029..4715562) Serratia proteamaculans 568 5606395 YP_001480475.1 CDS Spro_4253 NC_009832.1 4715611 4716087 R KEGG: ypi:YpsIP31758_0951 hypothetical protein; putative transcriptional regulator CadC complement(4715611..4716087) Serratia proteamaculans 568 5606396 YP_001480476.1 CDS Spro_4254 NC_009832.1 4716427 4717686 R TIGRFAM: nucleoside transporter; PFAM: nucleoside:H symporter; major facilitator superfamily MFS_1; KEGG: ypi:YpsIP31758_2823 xanthosine transporter XapB; nucleoside transporter complement(4716427..4717686) Serratia proteamaculans 568 5605727 YP_001480477.1 CDS Spro_4255 NC_009832.1 4717768 4718625 R catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation; purine nucleoside phosphorylase complement(4717768..4718625) Serratia proteamaculans 568 5605728 YP_001480478.1 CDS Spro_4256 NC_009832.1 4718788 4719660 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sec:SC2417 regulator for XapA (LysR family); DNA-binding transcriptional activator XapR 4718788..4719660 Serratia proteamaculans 568 5605729 YP_001480479.1 CDS Spro_4257 NC_009832.1 4719657 4721072 R PFAM: multicopper oxidase type 2; multicopper oxidase type 3; KEGG: yen:YE3654 putative cell division protein; repressor protein for FtsI complement(4719657..4721072) Serratia proteamaculans 568 5605827 YP_001480480.1 CDS Spro_4258 NC_009832.1 4721205 4721942 R KEGG: ypi:YpsIP31758_0582 1-acyl-sn-glycerol-3-phosphate acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase complement(4721205..4721942) Serratia proteamaculans 568 5605828 YP_001480481.1 CDS Spro_4259 NC_009832.1 4722183 4724456 R decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A complement(4722183..4724456) Serratia proteamaculans 568 5605829 YP_001480482.1 CDS Spro_4260 NC_009832.1 4724773 4725354 D PFAM: NAD(P)H dehydrogenase (quinone); KEGG: ypi:YpsIP31758_0580 putative NADH-quinone reductase MdaB; NAD(P)H dehydrogenase (quinone) 4724773..4725354 Serratia proteamaculans 568 5605461 YP_001480483.1 CDS Spro_4261 NC_009832.1 4725388 4725696 D PFAM: Antibiotic biosynthesis monooxygenase; KEGG: yen:YE3658 hypothetical protein; antibiotic biosynthesis monooxygenase 4725388..4725696 Serratia proteamaculans 568 5605462 YP_001480484.1 CDS Spro_4262 NC_009832.1 4725710 4726606 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ypi:YpsIP31758_0579 substrate-binding transcriptional regulator, LysR family; LysR family transcriptional regulator complement(4725710..4726606) Serratia proteamaculans 568 5605463 YP_001480485.1 CDS Spro_4263 NC_009832.1 4726703 4728598 R decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B complement(4726703..4728598) Serratia proteamaculans 568 5605426 YP_001480486.1 CDS Spro_4264 NC_009832.1 4728643 4729227 R Displays esterase activity toward palmitoyl-CoA and pNP-butyrate; esterase YqiA complement(4728643..4729227) Serratia proteamaculans 568 5605427 YP_001480487.1 CDS Spro_4265 NC_009832.1 4729227 4730054 R PFAM: metallophosphoesterase; Calcineurin phosphoesterase domain protein; KEGG: ypp:YPDSF_0448 Icc-like protein; cyclic 3',5'-adenosine monophosphate phosphodiesterase complement(4729227..4730054) Serratia proteamaculans 568 5605428 YP_001480488.1 CDS Spro_4266 NC_009832.1 4730082 4730507 R PFAM: protein of unknown function DUF1249; KEGG: ent:Ent638_3446 protein of unknown function DUF1249; hypothetical protein complement(4730082..4730507) Serratia proteamaculans 568 5605406 YP_001480489.1 CDS nudF NC_009832.1 4730507 4731139 R ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose; ADP-ribose pyrophosphatase NudF complement(4730507..4731139) Serratia proteamaculans 568 5605407 YP_001480490.1 CDS tolC NC_009832.1 4731421 4732914 D trimeric outer membrane protein involved in efflux of hydrophobic/amphipathic molecules; functions with a number of efflux systems in the inner membrane to transport molecules out of the cell; outer membrane channel protein 4731421..4732914 Serratia proteamaculans 568 5605408 YP_001480491.1 CDS Spro_4269 NC_009832.1 4733066 4735012 D Positively regulates the dhaKLM operon from a sigma-70 promoter; DNA-binding transcriptional regulator DhaR 4733066..4735012 Serratia proteamaculans 568 5605220 YP_001480492.1 CDS Spro_4270 NC_009832.1 4735023 4736456 R phosphotransferaese subunit; phosphorylates dihydroxyacetone along with DhaK/DhaL; dihydroxyacetone kinase subunit M complement(4735023..4736456) Serratia proteamaculans 568 5605221 YP_001480493.1 CDS Spro_4271 NC_009832.1 4736468 4737100 R TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase; KEGG: yen:YE0541 hypothetical protein; dihydroxyacetone kinase subunit L complement(4736468..4737100) Serratia proteamaculans 568 5605222 YP_001480494.1 CDS Spro_4272 NC_009832.1 4737110 4738180 R with DhaL and DhaM forms dihydroxyacetone kinase, which is responsible for phosphorylating dihydroxyacetone; DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase; dihydroxyacetone kinase subunit DhaK complement(4737110..4738180) Serratia proteamaculans 568 5605092 YP_001480495.1 CDS Spro_4273 NC_009832.1 4738233 4739339 R PFAM: iron-containing alcohol dehydrogenase; 3-dehydroquinate synthase; KEGG: yen:YE0539 glycerol dehydrogenase; iron-containing alcohol dehydrogenase complement(4738233..4739339) Serratia proteamaculans 568 5605093 YP_001480496.1 CDS Spro_4274 NC_009832.1 4739692 4740354 D KEGG: eca:ECA0329 hypothetical protein; hypothetical protein 4739692..4740354 Serratia proteamaculans 568 5605094 YP_001480497.1 CDS Spro_4275 NC_009832.1 4740358 4741518 D PFAM: glutathionylspermidine synthase; KEGG: yen:YE3667 hypothetical protein; glutathionylspermidine synthase 4740358..4741518 Serratia proteamaculans 568 5604849 YP_001480498.1 CDS Spro_4276 NC_009832.1 4741642 4742205 D catalyzes the formation of D-fructose 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate isomerase 4741642..4742205 Serratia proteamaculans 568 5604850 YP_001480499.1 CDS Spro_4277 NC_009832.1 4742198 4742980 D KEGG: pdi:BDI_3293 putative thermophilic glucose-6-phosphate isomerase-like protein; glucose-6-phosphate isomerase-like protein 4742198..4742980 Serratia proteamaculans 568 5604851 YP_001480500.1 CDS Spro_4278 NC_009832.1 4743210 4744031 R PFAM: PTS system mannose/fructose/sorbose family IID component; KEGG: aha:AHA_2339 fructose permease IID component; PTS system mannose/fructose/sorbose family transporter subunit IID complement(4743210..4744031) Serratia proteamaculans 568 5604826 YP_001480501.1 CDS Spro_4279 NC_009832.1 4744031 4744831 R PFAM: phosphotransferase system PTS sorbose-specific IIC subunit; KEGG: aha:AHA_2340 PTS system, fructose(mannose)-specific IIC; PTS system sorbose-specific transporter subunit IIC complement(4744031..4744831) Serratia proteamaculans 568 5604827 YP_001480502.1 CDS Spro_4280 NC_009832.1 4744854 4745348 R PFAM: PTS system sorbose subfamily IIB component; KEGG: aha:AHA_2341 PTS system mannose-specific EIIAB component (EIIAB-man); PTS system sorbose subfamily transporter subunit IIB complement(4744854..4745348) Serratia proteamaculans 568 5604828 YP_001480503.1 CDS Spro_4281 NC_009832.1 4745358 4745786 R PFAM: PTS system fructose subfamily IIA component; KEGG: aha:AHA_2342 PTS system, mannose/fructose/sorbose family, IIA component; PTS system fructose subfamily transporter subunit IIA complement(4745358..4745786) Serratia proteamaculans 568 5604810 YP_001480504.1 CDS Spro_4282 NC_009832.1 4745792 4747588 R KEGG: aha:AHA_2343 hypothetical protein; hypothetical protein complement(4745792..4747588) Serratia proteamaculans 568 5604811 YP_001480505.1 CDS Spro_4283 NC_009832.1 4747776 4748801 D PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: aha:AHA_2344 maltose regulon regulatory protein MalI; LacI family transcription regulator 4747776..4748801 Serratia proteamaculans 568 5604812 YP_001480506.1 CDS Spro_4284 NC_009832.1 4748817 4749599 R seems to be involved in biofilm formation; in asymptomatic bacteriuria E. coli strains 83972 and VR50, the ygiD gene is upregulated during biofilm formation in urine; hypothetical protein complement(4748817..4749599) Serratia proteamaculans 568 5604726 YP_001480507.1 CDS Spro_4285 NC_009832.1 4749806 4750573 D PFAM: zinc/iron permease; KEGG: ecv:APECO1_3371 zinc transporter ZupT; zinc transporter ZupT 4749806..4750573 Serratia proteamaculans 568 5604727 YP_001480508.1 CDS ribB NC_009832.1 4750636 4751289 R DHBP synthase; functions during riboflavin biosynthesis; 3,4-dihydroxy-2-butanone 4-phosphate synthase complement(4750636..4751289) Serratia proteamaculans 568 5604728 YP_001480509.1 CDS Spro_4287 NC_009832.1 4751708 4751986 D PFAM: protein of unknown function DUF526; KEGG: yen:YE3671 hypothetical protein; hypothetical protein 4751708..4751986 Serratia proteamaculans 568 5604519 YP_001480510.1 CDS Spro_4288 NC_009832.1 4752016 4753269 R uncharacterized member of the APC superfamily of amino acid transporters; unknown function; inner membrane protein YjeH complement(4752016..4753269) Serratia proteamaculans 568 5604520 YP_001480511.1 CDS Spro_4289 NC_009832.1 4753295 4754725 R catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D,D-heptose-1,7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D,D-heptose; bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase complement(4753295..4754725) Serratia proteamaculans 568 5604521 YP_001480512.1 CDS Spro_4290 NC_009832.1 4754819 4757656 R catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase complement(4754819..4757656) Serratia proteamaculans 568 5604478 YP_001480513.1 CDS Spro_4291 NC_009832.1 4757702 4759009 R PFAM: adenylate cyclase; KEGG: yen:YE3675 hypothetical protein; adenylate cyclase complement(4757702..4759009) Serratia proteamaculans 568 5604479 YP_001480514.1 CDS Spro_4292 NC_009832.1 4759290 4759910 D SMART: SH3 domain protein; KEGG: ypi:YpsIP31758_0561 hypothetical protein; putative signal transduction protein 4759290..4759910 Serratia proteamaculans 568 5604480 YP_001480515.1 CDS cca NC_009832.1 4760034 4761278 D catalyzes the addition and repair of the essential 3'-terminal CCA sequence in tRNAs without using a nucleic acid template; phosphohydrolase activities include hydrolysis of pyrophosphate, 5'-nucleoside tri- and diphosphates, NADP, and 2'-AMP with the production of Pi, metal-dependent phosphodiesterase activity for 2',3'-cAMP, 2',3'-cGMP, and 2',3'-cCMP, and hydrolysis 2',3'-cyclic substrates with the formation of 2'-nucleotides and 3'-nucleotides; these phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases; multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase 4760034..4761278 Serratia proteamaculans 568 5604463 YP_001480516.1 CDS Spro_4294 NC_009832.1 4761318 4762142 R BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase complement(4761318..4762142) Serratia proteamaculans 568 5604464 YP_001480517.1 CDS folB NC_009832.1 4762274 4762633 R catalyzes the conversion of 7,8-dihydroneopterin to 6-hydroxymethyl-7,8-dihydropterin and can also catalyze the epimerization of carbon 2' of dihydroneopterin and dihydromonapterin; bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase complement(4762274..4762633) Serratia proteamaculans 568 5604465 YP_001480518.1 CDS Spro_4296 NC_009832.1 4762741 4763379 D involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX; putative glycerol-3-phosphate acyltransferase PlsY 4762741..4763379 Serratia proteamaculans 568 5604401 YP_001480519.1 CDS Spro_4297 NC_009832.1 4763414 4764427 R in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; putative DNA-binding/iron metalloprotein/AP endonuclease complement(4763414..4764427) Serratia proteamaculans 568 5604402 YP_001480520.1 CDS rpsU NC_009832.1 4764752 4764967 D a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 4764752..4764967 Serratia proteamaculans 568 5604403 YP_001480521.1 CDS dnaG NC_009832.1 4765104 4766852 D synthesizes RNA primers at the replication forks; DNA primase 4765104..4766852 Serratia proteamaculans 568 5604407 YP_001480522.1 CDS Spro_4300 NC_009832.1 4766903 4768846 D sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD 4766903..4768846 Serratia proteamaculans 568 5604408 YP_001480523.1 CDS Spro_4301 NC_009832.1 4769345 4769833 R PFAM: Uracil-DNA glycosylase superfamily; KEGG: eca:ECA0679 G/U mismatch-specific DNA glycosylase; G/U mismatch-specific DNA glycosylase complement(4769345..4769833) Serratia proteamaculans 568 5604409 YP_001480524.1 CDS Spro_4302 NC_009832.1 4770153 4770869 R PFAM: HPP family protein?; KEGG: reh:H16_A0686 CBS-domain-containing membrane protein; HPP family protein complement(4770153..4770869) Serratia proteamaculans 568 5603044 YP_001480525.1 CDS Spro_4303 NC_009832.1 4771041 4771676 D PFAM: Glutathione S-transferase domain; KEGG: yen:YE1848 putative transferase; glutathione S-transferase domain-containing protein 4771041..4771676 Serratia proteamaculans 568 5604361 YP_001480526.1 CDS Spro_4304 NC_009832.1 4771748 4772992 R PFAM: aromatic amino acid permease; Amino acid transporter transmembrane; KEGG: kpn:KPN_03823 probable aromatic amino acid transporter; aromatic amino acid permease complement(4771748..4772992) Serratia proteamaculans 568 5604362 YP_001480527.1 CDS Spro_4305 NC_009832.1 4773051 4774505 R TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: eca:ECA2054 succinate-semialdehyde dehydrogenase [NADP+]; succinic semialdehyde dehydrogenase complement(4773051..4774505) Serratia proteamaculans 568 5604336 YP_001480528.1 CDS Spro_4306 NC_009832.1 4774519 4775784 R catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; 4-aminobutyrate aminotransferase complement(4774519..4775784) Serratia proteamaculans 568 5604337 YP_001480529.1 CDS Spro_4307 NC_009832.1 4775913 4777379 D PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: pin:Ping_0569 transcriptional regulator (GntR family) with HTH domain; transcriptional regulator 4775913..4777379 Serratia proteamaculans 568 5604338 YP_001480530.1 CDS Spro_4308 NC_009832.1 4777393 4779012 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: kpn:KPN_03920 putative ATP-binding component of a transport system; ABC transporter-like protein complement(4777393..4779012) Serratia proteamaculans 568 5604312 YP_001480531.1 CDS Spro_4309 NC_009832.1 4779311 4781332 D PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ypi:YpsIP31758_0501 2,4-dienoyl-coa reductase; NADH:flavin oxidoreductase/NADH oxidase 4779311..4781332 Serratia proteamaculans 568 5604313 YP_001480532.1 CDS Spro_4310 NC_009832.1 4781418 4781690 D PFAM: helix-turn-helix domain protein; KEGG: pha:PSHAa0452 transcriptional regulator; helix-turn-helix domain-containing protein 4781418..4781690 Serratia proteamaculans 568 5604314 YP_001480533.1 CDS Spro_4311 NC_009832.1 4781683 4782939 D PFAM: HipA domain protein; KEGG: mmw:Mmwyl1_4376 HipA domain protein; HipA domain-containing protein 4781683..4782939 Serratia proteamaculans 568 5606424 YP_001480534.1 CDS Spro_4312 NC_009832.1 4782933 4784072 R PFAM: methyltransferase small; KEGG: ypi:YpsIP31758_0500 methyltransferase family protein; rRNA (guanine-N(2)-)-methyltransferase complement(4782933..4784072) Serratia proteamaculans 568 5606425 YP_001480535.1 CDS Spro_4313 NC_009832.1 4784366 4784593 D PFAM: plasmid maintenance system killer; KEGG: vco:VC0395_0930 putative killer protein; plasmid maintenance system killer 4784366..4784593 Serratia proteamaculans 568 5606426 YP_001480536.1 CDS Spro_4314 NC_009832.1 4784608 4784931 D TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: plu:plu2984 hypothetical protein; XRE family plasmid maintenance system antidote protein 4784608..4784931 Serratia proteamaculans 568 5606397 YP_001480537.1 CDS Spro_4315 NC_009832.1 4784924 4785436 D PFAM: protein of unknown function DUF45; KEGG: yen:YE3701 hypothetical protein; hypothetical protein 4784924..4785436 Serratia proteamaculans 568 5606398 YP_001480538.1 CDS Spro_4316 NC_009832.1 4785487 4786467 D PFAM: oxidoreductase domain protein; KEGG: yen:YE3702 putative MocA-family oxidoreductase; oxidoreductase domain-containing protein 4785487..4786467 Serratia proteamaculans 568 5606399 YP_001480539.1 CDS Spro_4317 NC_009832.1 4786469 4787200 D PFAM: glutamine amidotransferase class-I; KEGG: bpe:BP1437 glutamine amidotransferase; glutamine amidotransferase class-I 4786469..4787200 Serratia proteamaculans 568 5606616 YP_001480540.1 CDS Spro_4318 NC_009832.1 4787459 4788436 D PFAM: Integral membrane protein TerC; KEGG: yen:YE3703 putative drug efflux protein; integral membrane protein TerC 4787459..4788436 Serratia proteamaculans 568 5606617 YP_001480541.1 CDS Spro_4319 NC_009832.1 4788702 4789937 D involved in the import of serine and threonine coupled with the import of sodium; serine/threonine transporter SstT 4788702..4789937 Serratia proteamaculans 568 5606618 YP_001480542.1 CDS Spro_4320 NC_009832.1 4790002 4791492 R PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein; KEGG: ypi:YpsIP31758_0493 altronate dehydratase; Altronate dehydratase complement(4790002..4791492) Serratia proteamaculans 568 5606956 YP_001480543.1 CDS Spro_4321 NC_009832.1 4791513 4792925 R catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate; functions in glucuronic and galacturonic metabolism; glucuronate isomerase complement(4791513..4792925) Serratia proteamaculans 568 5606957 YP_001480544.1 CDS Spro_4322 NC_009832.1 4793315 4794613 D TIGRFAM: d-galactonate transporter; PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA0644 galacturonate transporter; d-galactonate transporter 4793315..4794613 Serratia proteamaculans 568 5606958 YP_001480545.1 CDS Spro_4323 NC_009832.1 4794730 4795506 D regulates the exuT, uxaCA and uxuRAB operons which encode genes involved in hexuronate utilization.; DNA-binding transcriptional repressor ExuR 4794730..4795506 Serratia proteamaculans 568 5605035 YP_001480546.1 CDS Spro_4324 NC_009832.1 4795691 4796137 D KEGG: yen:YE3711 putative lipoprotein; putative lipoprotein 4795691..4796137 Serratia proteamaculans 568 5605036 YP_001480547.1 CDS Spro_4325 NC_009832.1 4796278 4796949 D PFAM: SNARE associated Golgi protein; KEGG: ypi:YpsIP31758_0487 hypothetical protein; hypothetical protein 4796278..4796949 Serratia proteamaculans 568 5605037 YP_001480548.1 CDS Spro_4326 NC_009832.1 4796949 4797320 D KEGG: yen:YE3713 hypothetical protein; hypothetical protein 4796949..4797320 Serratia proteamaculans 568 5603903 YP_001480549.1 CDS Spro_4327 NC_009832.1 4797545 4797916 D PFAM: protein of unknown function DUF1090; KEGG: ypi:YpsIP31758_0485 hypothetical protein; hypothetical protein 4797545..4797916 Serratia proteamaculans 568 5603904 YP_001480550.1 CDS Spro_4328 NC_009832.1 4798081 4798386 D PFAM: protein of unknown function DUF883 ElaB; KEGG: ypi:YpsIP31758_0483 hypothetical protein; hypothetical protein 4798081..4798386 Serratia proteamaculans 568 5603905 YP_001480551.1 CDS Spro_4329 NC_009832.1 4798389 4798790 D KEGG: yen:YE3716 hypothetical protein; hypothetical protein 4798389..4798790 Serratia proteamaculans 568 5606580 YP_001480552.1 CDS Spro_4330 NC_009832.1 4798787 4799074 D KEGG: eca:ECA0637 hypothetical protein; hypothetical protein 4798787..4799074 Serratia proteamaculans 568 5606581 YP_001480553.1 CDS Spro_4331 NC_009832.1 4799370 4799765 D PFAM: DoxX family protein; KEGG: yen:YE3718 hypothetical protein; DoxX family protein 4799370..4799765 Serratia proteamaculans 568 5606582 YP_001480554.1 CDS Spro_4332 NC_009832.1 4799839 4800825 D KEGG: yen:YE3719 hypothetical protein; hypothetical protein 4799839..4800825 Serratia proteamaculans 568 5606348 YP_001480555.1 CDS Spro_4333 NC_009832.1 4800863 4801768 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: yen:YE3720 LysR-family transcriptional regulatory protein; LysR family transcriptional regulator complement(4800863..4801768) Serratia proteamaculans 568 5606349 YP_001480556.1 CDS Spro_4334 NC_009832.1 4801876 4802577 D PFAM: Pirin domain protein; KEGG: yen:YE3721 hypothetical protein; pirin domain-containing protein 4801876..4802577 Serratia proteamaculans 568 5606350 YP_001480557.1 CDS Spro_4335 NC_009832.1 4803056 4803919 R PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: ypi:YpsIP31758_0476 putative tetrapyrrole methylase; uroporphyrin-III C/tetrapyrrole methyltransferase complement(4803056..4803919) Serratia proteamaculans 568 5603045 YP_001480558.1 CDS Spro_4336 NC_009832.1 4803982 4806006 D PFAM: LppC family lipoprotein; KEGG: yen:YE3727 hypothetical protein; LppC family lipoprotein 4803982..4806006 Serratia proteamaculans 568 5605807 YP_001480559.1 CDS Spro_4337 NC_009832.1 4806003 4806356 D PFAM: protein of unknown function UPF0102; KEGG: ypi:YpsIP31758_0474 hypothetical protein; hypothetical protein 4806003..4806356 Serratia proteamaculans 568 5605808 YP_001480560.1 CDS Spro_4338 NC_009832.1 4806408 4806998 D Required for the timely initiation of chromosomal replication via direct interactions with the dnaA initiator protein; DnaA initiator-associating protein DiaA 4806408..4806998 Serratia proteamaculans 568 5605637 YP_001480561.1 CDS Spro_4339 NC_009832.1 4807008 4807583 D PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: eca:ECA0319 putative lipoprotein; hypothetical protein 4807008..4807583 Serratia proteamaculans 568 5605638 YP_001480562.1 CDS mtgA NC_009832.1 4807664 4808395 R glycosyltransferase; polymerizes glycan strands in the peptidoglycan; monofunctional biosynthetic peptidoglycan transglycosylase complement(4807664..4808395) Serratia proteamaculans 568 5605639 YP_001480563.1 CDS Spro_4341 NC_009832.1 4808392 4809045 R PFAM: ThiJ/PfpI domain protein; KEGG: yen:YE3732 enhancing lycopene biosynthesis protein 2; isoprenoid biosynthesis protein with amidotransferase-like domain complement(4808392..4809045) Serratia proteamaculans 568 5605207 YP_001480564.1 CDS Spro_4342 NC_009832.1 4809283 4811622 R sensor-regulator protein which regulates the expression of many genes in response to respiratory growth conditions including anaerobic repression of the arc modulon; hybrid sensory histidine kinase in two-component regulatory system with ArcA; aerobic respiration control sensor protein ArcB complement(4809283..4811622) Serratia proteamaculans 568 5605208 YP_001480565.1 CDS Spro_4343 NC_009832.1 4811715 4812653 R KEGG: yen:YE3734 hypothetical protein; TIGRFAM: conserved hypothetical radical SAM protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; putative radical SAM protein complement(4811715..4812653) Serratia proteamaculans 568 5605209 YP_001480566.1 CDS gltB NC_009832.1 4813347 4817807 D catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate; glutamate synthase subunit alpha 4813347..4817807 Serratia proteamaculans 568 5605438 YP_001480567.1 CDS gltD NC_009832.1 4817818 4819236 D glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta 4817818..4819236 Serratia proteamaculans 568 5605439 YP_001480568.1 CDS Spro_4346 NC_009832.1 4819357 4819854 R PFAM: Stringent starvation protein B; KEGG: ecv:APECO1_3216 stringent starvation protein B; ClpXP protease specificity-enhancing factor complement(4819357..4819854) Serratia proteamaculans 568 5605440 YP_001480569.1 CDS sspA NC_009832.1 4819860 4820501 R transcriptional activator; required for activation of bacteriophage P1 late promoter; induced by starvation; stringent starvation protein A complement(4819860..4820501) Serratia proteamaculans 568 5605389 YP_001480570.1 CDS rpsI NC_009832.1 4820838 4821230 R forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 complement(4820838..4821230) Serratia proteamaculans 568 5605390 YP_001480571.1 CDS rplM NC_009832.1 4821246 4821674 R in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 complement(4821246..4821674) Serratia proteamaculans 568 5605391 YP_001480572.1 CDS Spro_4350 NC_009832.1 4821951 4823081 R PFAM: AFG1-family ATPase; KEGG: yen:YE3742 hypothetical protein; AFG1 family ATPase complement(4821951..4823081) Serratia proteamaculans 568 5604333 YP_001480573.1 CDS Spro_4351 NC_009832.1 4823313 4823714 D PFAM: protein of unknown function DUF1043; KEGG: yen:YE3743 hypothetical protein; cytochrome d ubiquinol oxidase subunit III 4823313..4823714 Serratia proteamaculans 568 5604334 YP_001480574.1 CDS Spro_4352 NC_009832.1 4823910 4825280 D KEGG: eca:ECA0303 exported protease; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; protease Do 4823910..4825280 Serratia proteamaculans 568 5604335 YP_001480575.1 CDS Spro_4353 NC_009832.1 4825377 4826435 D KEGG: sfv:SFV_3262 protease; TIGRFAM: periplasmic serine protease DegS; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; serine endoprotease 4825377..4826435 Serratia proteamaculans 568 5604024 YP_001480576.1 CDS Spro_4354 NC_009832.1 4826505 4827764 R adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(4826505..4827764) Serratia proteamaculans 568 5604025 YP_001480577.1 CDS Spro_4355 NC_009832.1 4827820 4828074 R PFAM: BolA family protein; KEGG: yen:YE3747 BolA-like protein; BolA family protein complement(4827820..4828074) Serratia proteamaculans 568 5604026 YP_001480578.1 CDS Spro_4356 NC_009832.1 4828215 4828514 R PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: ypi:YpsIP31758_0452 putative anti-anti-sigma factor; anti-sigma-factor antagonist complement(4828215..4828514) Serratia proteamaculans 568 5604484 YP_001480579.1 CDS Spro_4357 NC_009832.1 4828514 4829143 R PFAM: toluene tolerance family protein; KEGG: eca:ECA0298 hypothetical protein; toluene tolerance family protein complement(4828514..4829143) Serratia proteamaculans 568 5604485 YP_001480580.1 CDS Spro_4358 NC_009832.1 4829158 4829709 R PFAM: Mammalian cell entry related domain protein; KEGG: eca:ECA0297 putative exported protein; hypothetical protein complement(4829158..4829709) Serratia proteamaculans 568 5604486 YP_001480581.1 CDS Spro_4359 NC_009832.1 4829714 4830496 R PFAM: protein of unknown function DUF140; KEGG: yen:YE3751 hypothetical protein; hypothetical protein complement(4829714..4830496) Serratia proteamaculans 568 5604445 YP_001480582.1 CDS Spro_4360 NC_009832.1 4830501 4831316 R ATP-binding subunit of a putative ABC toluene efflux transporter; putative ABC transporter ATP-binding protein YrbF complement(4830501..4831316) Serratia proteamaculans 568 5604446 YP_001480583.1 CDS Spro_4361 NC_009832.1 4831620 4832597 D YrbG; inner membrane protein involved in cell envelope integrity; putative sodium ion/calcium ion exchanger; in E. coli it is non essential for cell viability; member of the YRBG family of cation/Ca2+ exchangers; putative calcium/sodium:proton antiporter 4831620..4832597 Serratia proteamaculans 568 5604447 YP_001480584.1 CDS Spro_4362 NC_009832.1 4832618 4833604 D KEGG: yen:YE3754 hypothetical protein; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS); D-arabinose 5-phosphate isomerase 4832618..4833604 Serratia proteamaculans 568 5604433 YP_001480585.1 CDS Spro_4363 NC_009832.1 4833607 4834176 D forms homotetramers; catalyzes hydrolysis of KDO 8-P to KDO and inorganic phosphate; functions in lipopolysaccharide biosynthesis; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 4833607..4834176 Serratia proteamaculans 568 5604434 YP_001480586.1 CDS Spro_4364 NC_009832.1 4834173 4834751 D PFAM: protein of unknown function DUF1239; KEGG: yen:YE3756 hypothetical protein; hypothetical protein 4834173..4834751 Serratia proteamaculans 568 5604435 YP_001480587.1 CDS Spro_4365 NC_009832.1 4834720 4835259 D LptA; periplasmic binding protein part of a putative ABC superfamily of uptake transporters; interacts with LptB protein, the ATP binding component of the uptake system; lipopolysaccharide transport periplasmic protein LptA 4834720..4835259 Serratia proteamaculans 568 5604275 YP_001480588.1 CDS Spro_4366 NC_009832.1 4835266 4835991 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: yen:YE3758 probable ABC transporter ATP-binding protein; putative ABC transporter ATP-binding protein YhbG 4835266..4835991 Serratia proteamaculans 568 5604276 YP_001480589.1 CDS Spro_4367 NC_009832.1 4836042 4837475 D sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 4836042..4837475 Serratia proteamaculans 568 5604277 YP_001480590.1 CDS Spro_4368 NC_009832.1 4837499 4837786 D YhbH; resting ribosome-binding protein involved in ribosome stabilization and preservation in stationary phase; binds specifically 100S ribosomes (an inactive ribosome product of a 70S ribosome dimerization); seems to be involved in modulation of the sigma(54) (RpoN) activity for quorum sensing; putative sigma(54) modulation protein 4837499..4837786 Serratia proteamaculans 568 5604050 YP_001480591.1 CDS Spro_4369 NC_009832.1 4837950 4838411 D TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: yen:YE3761 nitrogen regulatory IIA protein; PTS system transporter subunit IIA-like nitrogen-regulatory protein PtsN 4837950..4838411 Serratia proteamaculans 568 5604051 YP_001480592.1 CDS Spro_4370 NC_009832.1 4838543 4839397 D PFAM: conserved hypothetical protein; KEGG: ypi:YpsIP31758_0438 P-loop ATPase protein family; hypothetical protein 4838543..4839397 Serratia proteamaculans 568 5604052 YP_001480593.1 CDS Spro_4371 NC_009832.1 4839394 4839666 D TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: yen:YE3763 putative phosphocarrier protein; phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) 4839394..4839666 Serratia proteamaculans 568 5603962 YP_001480594.1 CDS Spro_4372 NC_009832.1 4839722 4841638 R PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; M trans-acting positive regulator; PRD domain protein; Helix-turn-helix type 11 domain protein; KEGG: yen:YE3777 putative transcriptional regulator; transcriptional antiterminator, BglG complement(4839722..4841638) Serratia proteamaculans 568 5603963 YP_001480595.1 CDS Spro_4373 NC_009832.1 4841690 4842904 R KEGG: yen:YE3778 hypothetical protein; 6-phosphogluconolactonase complement(4841690..4842904) Serratia proteamaculans 568 5603964 YP_001480596.1 CDS Spro_4374 NC_009832.1 4842997 4843737 R PFAM: protein of unknown function DUF1341; KEGG: ent:Ent638_0431 protein of unknown function DUF1341; hypothetical protein complement(4842997..4843737) Serratia proteamaculans 568 5603924 YP_001480597.1 CDS Spro_4375 NC_009832.1 4843734 4844852 R TIGRFAM: pyridoxal phosphate-dependent enzyme, putative; PFAM: L-seryl-tRNA selenium transferase; KEGG: yen:YE3780 possible L-seryl-tRNA selenocysteine synthase; pyridoxal phosphate-dependent enzyme complement(4843734..4844852) Serratia proteamaculans 568 5603925 YP_001480598.1 CDS Spro_4376 NC_009832.1 4844836 4845975 R Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase complement(4844836..4845975) Serratia proteamaculans 568 5603926 YP_001480599.1 CDS Spro_4377 NC_009832.1 4846038 4846691 R KEGG: yen:YE3782 putative inner membrane protein; hypothetical protein complement(4846038..4846691) Serratia proteamaculans 568 5603708 YP_001480600.1 CDS Spro_4378 NC_009832.1 4846700 4847476 R KEGG: yen:YE3783 hypothetical protein; hypothetical protein complement(4846700..4847476) Serratia proteamaculans 568 5603709 YP_001480601.1 CDS Spro_4379 NC_009832.1 4847507 4847803 R KEGG: yen:YE3784 hypothetical protein; hypothetical protein complement(4847507..4847803) Serratia proteamaculans 568 5603710 YP_001480602.1 CDS Spro_4380 NC_009832.1 4847803 4848168 R KEGG: yen:YE3785 hypothetical protein; hypothetical protein complement(4847803..4848168) Serratia proteamaculans 568 5607222 YP_001480603.1 CDS Spro_4381 NC_009832.1 4848203 4848550 R PFAM: PRD domain protein; KEGG: yen:YE3786 hypothetical protein; PRD domain-containing protein complement(4848203..4848550) Serratia proteamaculans 568 5607223 YP_001480604.1 CDS Spro_4382 NC_009832.1 4848974 4849384 D Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis, CTP for lipid synthesis, and GTP for protein elongation; nucleoside diphosphate kinase regulator 4848974..4849384 Serratia proteamaculans 568 5607224 YP_001480605.1 CDS Spro_4383 NC_009832.1 4849442 4849828 R PFAM: cytochrome b562; KEGG: yen:YE3788 putative cytochrome; cytochrome b562 complement(4849442..4849828) Serratia proteamaculans 568 5603109 YP_001480606.1 CDS Spro_4384 NC_009832.1 4849980 4851320 R protease involved in proteolytic processing of the antibiotic Microcin B17 and in sensitivity to the DNA gyrase inhibitor LetD; peptidase PmbA complement(4849980..4851320) Serratia proteamaculans 568 5603110 YP_001480607.1 CDS Spro_4385 NC_009832.1 4851496 4851834 R KEGG: pna:Pnap_0994 uncharacterized conserved small protein-like protein; hypothetical protein complement(4851496..4851834) Serratia proteamaculans 568 5603111 YP_001480608.1 CDS Spro_4386 NC_009832.1 4851831 4852181 R PFAM: protein of unknown function DUF891; KEGG: spt:SPA3745 hypothetical protein; hypothetical protein complement(4851831..4852181) Serratia proteamaculans 568 5602926 YP_001480609.1 CDS Spro_4387 NC_009832.1 4852369 4852917 D PFAM: protein of unknown function DUF615; KEGG: yen:YE3790 hypothetical protein; hypothetical protein 4852369..4852917 Serratia proteamaculans 568 5602927 YP_001480610.1 CDS Spro_4388 NC_009832.1 4852948 4853247 R PFAM: Barstar (barnase inhibitor); KEGG: yen:YE3791 putative ribonuclease inhibitor; barnase inhibitor complement(4852948..4853247) Serratia proteamaculans 568 5602928 YP_001480611.1 CDS Spro_4389 NC_009832.1 4853253 4853702 R PFAM: guanine-specific ribonuclease N1 and T1; KEGG: ypi:YpsIP31758_0423 ribonuclease Ba; guanine-specific ribonuclease N1 and T1 complement(4853253..4853702) Serratia proteamaculans 568 5606764 YP_001480612.1 CDS Spro_4390 NC_009832.1 4853946 4855913 R with AaeA forms an efflux pump whose substrates are p-hydroxybenzoic acid 6-hydroxy-2-naphthoic and 2-hydroxycinnamate; p-hydroxybenzoic acid efflux subunit AaeB complement(4853946..4855913) Serratia proteamaculans 568 5606765 YP_001480613.1 CDS Spro_4391 NC_009832.1 4855913 4856848 R with AaeB forms an efflux pump whose substrates are p-hydroxybenzoic acid, 6-hydroxy-2-naphthoic and 2-hydroxycinnamate; p-hydroxybenzoic acid efflux subunit AaeA complement(4855913..4856848) Serratia proteamaculans 568 5606766 YP_001480614.1 CDS Spro_4392 NC_009832.1 4856856 4857059 R membrane protein AaeX; the gene is a member of the aaeXAB operon; hypothetical protein complement(4856856..4857059) Serratia proteamaculans 568 5603017 YP_001480615.1 CDS Spro_4393 NC_009832.1 4857368 4858279 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: yen:YE3797 probable LysR-family transcriptional regulatory protein; putative DNA-binding transcriptional regulator 4857368..4858279 Serratia proteamaculans 568 5603018 YP_001480616.1 CDS Spro_4394 NC_009832.1 4858242 4858619 R hypothetical protein complement(4858242..4858619) Serratia proteamaculans 568 5603019 YP_001480617.1 CDS Spro_4395 NC_009832.1 4858622 4858903 R KEGG: sfr:Sfri_3475 hypothetical protein; hypothetical protein complement(4858622..4858903) Serratia proteamaculans 568 5602987 YP_001480618.1 CDS Spro_4396 NC_009832.1 4859112 4860056 D PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: aau:AAur_3646 putative inosine-uridine preferring nucleoside hydrolase (IunH); purine nucleosidase 4859112..4860056 Serratia proteamaculans 568 5602988 YP_001480619.1 CDS Spro_4397 NC_009832.1 4860594 4860899 R hypothetical protein complement(4860594..4860899) Serratia proteamaculans 568 5602989 YP_001480620.1 CDS Spro_4398 NC_009832.1 4860904 4861896 R KEGG: ypi:YpsIP31758_0514 hypothetical protein; hypothetical protein complement(4860904..4861896) Serratia proteamaculans 568 5602795 YP_001480621.1 CDS Spro_4399 NC_009832.1 4861893 4862006 R hypothetical protein complement(4861893..4862006) Serratia proteamaculans 568 5602796 YP_001480622.1 CDS Spro_4400 NC_009832.1 4862117 4862326 R KEGG: ypi:YpsIP31758_0514 hypothetical protein; hypothetical protein complement(4862117..4862326) Serratia proteamaculans 568 5602797 YP_001480623.1 CDS Spro_4401 NC_009832.1 4862437 4862691 R hypothetical protein complement(4862437..4862691) Serratia proteamaculans 568 5605958 YP_001480624.1 CDS Spro_4402 NC_009832.1 4862809 4871931 R TIGRFAM: filamentous haemagglutinin family outer membrane protein; adhesin HecA family; PFAM: Haemagluttinin repeat-containing protein; filamentous haemagglutinin domain protein; KEGG: eci:UTI89_C4946 putative member of ShlA/HecA/FhaA exoprotein family; filamentous hemagglutinin outer membrane protein complement(4862809..4871931) Serratia proteamaculans 568 5605959 YP_001480625.1 CDS Spro_4403 NC_009832.1 4871958 4873631 R PFAM: Hemolysin activator HlyB domain protein; Polypeptide-transport-associated domain protein ShlB-type; KEGG: ent:Ent638_0052 polypeptide-transport-associated domain protein, ShlB-type; polypeptide-transport-associated domain-containing protein complement(4871958..4873631) Serratia proteamaculans 568 5605960 YP_001480626.1 CDS tldD NC_009832.1 4873919 4875364 R responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17, an exported protein that targets the essential topoisomerase II DNA gyrase; degrades the E. coli plasmid F-encoded CcdA; protease TldD complement(4873919..4875364) Serratia proteamaculans 568 5602525 YP_001480627.1 CDS Spro_4405 NC_009832.1 4875372 4876232 R PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: ypi:YpsIP31758_0404 hydrolase, carbon-nitrogen family protein; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(4875372..4876232) Serratia proteamaculans 568 5602526 YP_001480628.1 CDS Spro_4406 NC_009832.1 4876229 4880104 R KEGG: yen:YE3800 hypothetical protein; hypothetical protein complement(4876229..4880104) Serratia proteamaculans 568 5602527 YP_001480629.1 CDS Spro_4407 NC_009832.1 4880148 4881617 R involved in the processing of the 5'end of 16S rRNA; ribonuclease G complement(4880148..4881617) Serratia proteamaculans 568 5606786 YP_001480630.1 CDS Spro_4408 NC_009832.1 4881656 4882240 R Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein complement(4881656..4882240) Serratia proteamaculans 568 5606787 YP_001480631.1 CDS Spro_4409 NC_009832.1 4882251 4882739 R part of cell wall structural complex MreBCD; transmembrane component; rod shape-determining protein MreD complement(4882251..4882739) Serratia proteamaculans 568 5606788 YP_001480632.1 CDS Spro_4410 NC_009832.1 4882736 4883740 R in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC complement(4882736..4883740) Serratia proteamaculans 568 5602812 YP_001480633.1 CDS Spro_4411 NC_009832.1 4883835 4884878 R functions in MreBCD complex in some organisms; rod shape-determining protein MreB complement(4883835..4884878) Serratia proteamaculans 568 5602813 YP_001480634.1 CDS Spro_4412 NC_009832.1 4885291 4887222 R regulates the degradation of the small RNAs CsrB and CsrC; may function to targate RNase E to specific RNA molecules; regulatory protein CsrD complement(4885291..4887222) Serratia proteamaculans 568 5602814 YP_001480635.1 CDS Spro_4413 NC_009832.1 4887516 4888493 D TIGRFAM: Quinone oxidoreductase putative YhdH/YhfP; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ypi:YpsIP31758_0396 putative quinone oxidoreductase, YhdH/YhfP family protein; quinone oxidoreductase 4887516..4888493 Serratia proteamaculans 568 5605892 YP_001480636.1 CDS Spro_4414 NC_009832.1 4888615 4889616 D in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ; putative sulfite oxidase subunit YedY 4888615..4889616 Serratia proteamaculans 568 5605893 YP_001480637.1 CDS Spro_4415 NC_009832.1 4889617 4890216 D in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY; sulfite oxidase activity not demonstrated; contains heme; putative sulfite oxidase subunit YedZ 4889617..4890216 Serratia proteamaculans 568 5605894 YP_001480638.1 CDS Spro_4416 NC_009832.1 4890458 4890910 D catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 4890458..4890910 Serratia proteamaculans 568 5602964 YP_001480639.1 CDS Spro_4417 NC_009832.1 4890943 4891407 D TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: eca:ECA0261 biotin carboxyl carrier protein of acetyl-CoA carboxylase; acetyl-CoA carboxylase, biotin carboxyl carrier protein 4890943..4891407 Serratia proteamaculans 568 5602965 YP_001480640.1 CDS Spro_4418 NC_009832.1 4891418 4892767 D an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit 4891418..4892767 Serratia proteamaculans 568 5602966 YP_001480641.1 CDS Spro_4419 NC_009832.1 4892908 4893150 D PFAM: protein of unknown function DUF997; KEGG: ent:Ent638_3695 protein of unknown function DUF997; hypothetical protein 4892908..4893150 Serratia proteamaculans 568 5606333 YP_001480642.1 CDS panF NC_009832.1 4893140 4894585 D mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions; member of SSS family of sodium/solute symporters; the imported panthothenate is phosphorylated by panthothenate kinase; sodium/panthothenate symporter 4893140..4894585 Serratia proteamaculans 568 5606334 YP_001480643.1 CDS prmA NC_009832.1 4894598 4895479 D methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; 50S ribosomal protein L11 methyltransferase 4894598..4895479 Serratia proteamaculans 568 5606335 YP_001480644.1 CDS Spro_4422 NC_009832.1 4895666 4896400 D PFAM: carbonic anhydrase; KEGG: eca:ECA0257 carbonic anhydrase; carbonate dehydratase 4895666..4896400 Serratia proteamaculans 568 5606725 YP_001480645.1 CDS Spro_4423 NC_009832.1 4896787 4897752 D TIGRFAM: putative TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; dihydroorotate dehydrogenase; KEGG: ypi:YpsIP31758_0386 dihydrouridine synthase; tRNA-dihydrouridine synthase B 4896787..4897752 Serratia proteamaculans 568 5606726 YP_001480646.1 CDS fis NC_009832.1 4897774 4898070 D Stimulates excision of phage lambda; affects Mu development; acts as an activator of rRNA and iRNA transcription; DNA-binding protein Fis 4897774..4898070 Serratia proteamaculans 568 5606727 YP_001480647.1 CDS Spro_4425 NC_009832.1 4898427 4899347 D Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(palmitoleoyl)-lipid IVA in cells subjected to cold shock; lipid A biosynthesis palmitoleoyl acyltransferase 4898427..4899347 Serratia proteamaculans 568 5603853 YP_001480648.1 CDS Spro_4426 NC_009832.1 4899467 4900165 D KEGG: ent:Ent638_1664 CTP synthase; hypothetical protein 4899467..4900165 Serratia proteamaculans 568 5603854 YP_001480649.1 CDS Spro_4427 NC_009832.1 4900215 4900904 R PFAM: LrgB family protein; KEGG: yen:YE3837 putative inner membrane protein; LrgB family protein complement(4900215..4900904) Serratia proteamaculans 568 5603855 YP_001480650.1 CDS Spro_4428 NC_009832.1 4900897 4901319 R PFAM: LrgA family protein; KEGG: ent:Ent638_0272 LrgA family protein; LrgA family protein complement(4900897..4901319) Serratia proteamaculans 568 5603918 YP_001480651.1 CDS Spro_4429 NC_009832.1 4901459 4902346 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: yen:YE3838 putative LysR family transcriptional regulator; LysR family transcriptional regulator 4901459..4902346 Serratia proteamaculans 568 5603919 YP_001480652.1 CDS Spro_4430 NC_009832.1 4902376 4904025 R TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger; KEGG: yen:YE3839 putative putative Na(+)/H(+) exchanger protein; Na+/H+ antiporter complement(4902376..4904025) Serratia proteamaculans 568 5603920 YP_001480653.1 CDS Spro_4431 NC_009832.1 4904210 4905571 R PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: yps:YPTB3600 putative xanthine/uracil permease; xanthine/uracil/vitamin C permease complement(4904210..4905571) Serratia proteamaculans 568 5603989 YP_001480654.1 CDS Spro_4432 NC_009832.1 4905908 4906315 R KEGG: reh:H16_B2255 lactoylglutathione lyase; lactoylglutathione lyase complement(4905908..4906315) Serratia proteamaculans 568 5603990 YP_001480655.1 CDS Spro_4433 NC_009832.1 4906363 4907031 R PFAM: Glutathione S-transferase domain; KEGG: yen:YE3841 putative glutathione S transferase; glutathione S-transferase domain-containing protein complement(4906363..4907031) Serratia proteamaculans 568 5603991 YP_001480656.1 CDS Spro_4434 NC_009832.1 4907028 4907471 R KEGG: yen:YE3390 hypothetical protein; hypothetical protein complement(4907028..4907471) Serratia proteamaculans 568 5604018 YP_001480657.1 CDS Spro_4435 NC_009832.1 4907683 4907943 D PFAM: protein of unknown function DUF1471; KEGG: yen:YE2851 hypothetical protein; hypothetical protein 4907683..4907943 Serratia proteamaculans 568 5604019 YP_001480658.1 CDS Spro_4436 NC_009832.1 4908000 4908917 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mms:mma_1861 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(4908000..4908917) Serratia proteamaculans 568 5604020 YP_001480659.1 CDS Spro_4437 NC_009832.1 4909048 4909797 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mms:mma_1860 oxidoreductase, short chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR 4909048..4909797 Serratia proteamaculans 568 5604035 YP_001480660.1 CDS Spro_4438 NC_009832.1 4910068 4911618 D PFAM: Lytic transglycosylase catalytic; SMART: extracellular solute-binding protein family 3; KEGG: kpn:KPN_04447 putative periplasmic binding protein of transport system; lytic transglycosylase 4910068..4911618 Serratia proteamaculans 568 5604036 YP_001480661.1 CDS Spro_4439 NC_009832.1 4911697 4912242 R TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: yen:YE3844 single-strand binding protein; single-strand binding protein complement(4911697..4912242) Serratia proteamaculans 568 5604037 YP_001480662.1 CDS uvrA NC_009832.1 4912520 4915351 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A 4912520..4915351 Serratia proteamaculans 568 5604079 YP_001480663.1 CDS Spro_4441 NC_009832.1 4915574 4916626 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bvi:Bcep1808_3188 alcohol dehydrogenase, zinc-binding domain protein; alcohol dehydrogenase 4915574..4916626 Serratia proteamaculans 568 5604080 YP_001480664.1 CDS Spro_4442 NC_009832.1 4916665 4917222 R PFAM: transferase hexapeptide repeat containing protein; KEGG: ent:Ent638_0939 transferase hexapeptide repeat containing protein; maltose O-acetyltransferase complement(4916665..4917222) Serratia proteamaculans 568 5604081 YP_001480665.1 CDS Spro_4443 NC_009832.1 4917387 4917740 R PFAM: protein of unknown function DUF419; KEGG: yen:YE3846 hypothetical protein; hypothetical protein complement(4917387..4917740) Serratia proteamaculans 568 5604257 YP_001480666.1 CDS Spro_4444 NC_009832.1 4917745 4918161 R PFAM: protein of unknown function UPF0047; KEGG: kpn:KPN_04443 hypothetical protein; hypothetical protein complement(4917745..4918161) Serratia proteamaculans 568 5604258 YP_001480667.1 CDS Spro_4445 NC_009832.1 4918284 4919477 R catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase complement(4918284..4919477) Serratia proteamaculans 568 5604259 YP_001480668.1 CDS Spro_4446 NC_009832.1 4919559 4920026 R PFAM: regulatory protein AsnC/Lrp family; KEGG: eca:ECA3668 AsnC-family transcriptional regulator; AsnC family transcriptional regulator complement(4919559..4920026) Serratia proteamaculans 568 5604263 YP_001480669.1 CDS Spro_4447 NC_009832.1 4920241 4921008 D PFAM: extracellular solute-binding protein family 3; KEGG: pfo:Pfl_3814 extracellular solute-binding protein, family 3; arogenate dehydratase 4920241..4921008 Serratia proteamaculans 568 5604264 YP_001480670.1 CDS alr NC_009832.1 4921051 4922130 R converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase complement(4921051..4922130) Serratia proteamaculans 568 5604265 YP_001480671.1 CDS Spro_4449 NC_009832.1 4922148 4923572 R unwinds double stranded DNA; replicative DNA helicase complement(4922148..4923572) Serratia proteamaculans 568 5604283 YP_001480672.1 CDS Spro_4450 NC_009832.1 4923750 4924739 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: eca:ECA3663 quinone oxidoreductase; NADPH-dependent quinone oxidoreductase 4923750..4924739 Serratia proteamaculans 568 5604284 YP_001480673.1 CDS Spro_4451 NC_009832.1 4924858 4925289 D PFAM: protein of unknown function DUF1311; KEGG: pen:PSEEN0989 hypothetical protein; hypothetical protein 4924858..4925289 Serratia proteamaculans 568 5604285 YP_001480674.1 CDS pspG NC_009832.1 4925600 4925818 R coordinately regulated along with pspA; PspF-dependent induction in response to secretin overexpression in Yersinia; phage shock protein G complement(4925600..4925818) Serratia proteamaculans 568 5604298 YP_001480675.1 CDS Spro_4453 NC_009832.1 4925978 4926988 R TIGRFAM: TIM-barrel protein, yjbN family; PFAM: dihydrouridine synthase DuS; KEGG: stt:t4149 tRNA-dihydrouridine synthase A; tRNA-dihydrouridine synthase A complement(4925978..4926988) Serratia proteamaculans 568 5604299 YP_001480676.1 CDS Spro_4454 NC_009832.1 4927194 4927727 D PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: ent:Ent638_3118 TPR repeat-containing protein; TPR repeat-containing protein 4927194..4927727 Serratia proteamaculans 568 5604300 YP_001480677.1 CDS Spro_4455 NC_009832.1 4927817 4928266 D TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: ret:RHE_CH00746 RNA polymerase sigma factor protein (sigma-24); ECF subfamily RNA polymerase sigma-24 factor 4927817..4928266 Serratia proteamaculans 568 5606189 YP_001480678.1 CDS Spro_4456 NC_009832.1 4928263 4929021 D KEGG: pfo:Pfl_2886 predicted transmembrane transcriptional regulator (anti-sigma-factor); putative transmembrane anti-sigma factor 4928263..4929021 Serratia proteamaculans 568 5606190 YP_001480679.1 CDS Spro_4457 NC_009832.1 4929178 4929690 D Acts as a negative controlling element, employing Zn(2+) as a cofactor to bind the operator of the repressed genes znuACB; zinc uptake transcriptional repressor 4929178..4929690 Serratia proteamaculans 568 5606191 YP_001480680.1 CDS Spro_4458 NC_009832.1 4929807 4930016 R unknown function; highly abundant protein in vivo; overexpressed under high NaCl concentrations; part of the sigma S regulon; non-essential; putative stress-response protein complement(4929807..4930016) Serratia proteamaculans 568 5606671 YP_001480681.1 CDS Spro_4459 NC_009832.1 4930301 4931665 R TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: kpn:KPN_04432 DNA-damage-inducible protein F; DNA-damage-inducible SOS response protein complement(4930301..4931665) Serratia proteamaculans 568 5606672 YP_001480682.1 CDS Spro_4460 NC_009832.1 4931958 4932566 R Represses a number of genes involved in the response to DNA damage; LexA repressor complement(4931958..4932566) Serratia proteamaculans 568 5606673 YP_001480683.1 CDS Spro_4461 NC_009832.1 4932688 4933056 R PFAM: diacylglycerol kinase; KEGG: sec:SC4115 diacylglycerol kinase; diacylglycerol kinase complement(4932688..4933056) Serratia proteamaculans 568 5602698 YP_001480684.1 CDS Spro_4462 NC_009832.1 4933206 4935671 D PlsB; catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA; glycerol-3-phosphate acyltransferase 4933206..4935671 Serratia proteamaculans 568 5602699 YP_001480685.1 CDS ubiA NC_009832.1 4935729 4936622 R catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate, as part of the ubiquinone biosynthesis pathway; 4-hydroxybenzoate octaprenyltransferase complement(4935729..4936622) Serratia proteamaculans 568 5602700 YP_001480686.1 CDS ubiC NC_009832.1 4936619 4937143 R catalyzes the formation of 4-hydroxybenzoate from chorismate; chorismate pyruvate lyase complement(4936619..4937143) Serratia proteamaculans 568 5607083 YP_001480687.1 CDS Spro_4465 NC_009832.1 4937543 4938925 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: yen:YE3588 putative transporter protein; major facilitator transporter 4937543..4938925 Serratia proteamaculans 568 5607084 YP_001480688.1 CDS Spro_4466 NC_009832.1 4938948 4939949 D KEGG: yen:YE3589 LacI family regulatory protein; PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; LacI family transcription regulator 4938948..4939949 Serratia proteamaculans 568 5607085 YP_001480689.1 CDS Spro_4467 NC_009832.1 4939972 4940955 D PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: yen:YE3590 putative hydrolase; inosine/uridine-preferring nucleoside hydrolase 4939972..4940955 Serratia proteamaculans 568 5602511 YP_001480690.1 CDS Spro_4468 NC_009832.1 4941011 4941919 R PFAM: Maltose operon periplasmic; KEGG: yen:YE3861 maltose operon periplasmic protein; maltose regulon periplasmic protein complement(4941011..4941919) Serratia proteamaculans 568 5602512 YP_001480691.1 CDS lamB NC_009832.1 4942015 4943319 R porin involved in the transport of maltose and maltodextrins; maltoporin complement(4942015..4943319) Serratia proteamaculans 568 5602513 YP_001480692.1 CDS Spro_4470 NC_009832.1 4943349 4944458 R with malEFG is involved in import of maltose/maltodextrin; maltose/maltodextrin transporter ATP-binding protein complement(4943349..4944458) Serratia proteamaculans 568 5603062 YP_001480693.1 CDS Spro_4471 NC_009832.1 4944451 4945422 R KEGG: yps:YPTB3644 hypothetical protein; hypothetical protein complement(4944451..4945422) Serratia proteamaculans 568 5603063 YP_001480694.1 CDS malE NC_009832.1 4945782 4946975 D functions in the MalKFGE ABC transporter complex to transport maltose into the cell by using ATP hydrolysis; maltose ABC transporter periplasmic protein 4945782..4946975 Serratia proteamaculans 568 5603064 YP_001480695.1 CDS malF NC_009832.1 4947039 4948616 D with MalKGE is involved in maltose transport into the cell; maltose transporter membrane protein 4947039..4948616 Serratia proteamaculans 568 5606940 YP_001480696.1 CDS malG NC_009832.1 4948628 4949518 D with MalKFE is involved in the transport of maltose into the cell; maltose transporter permease 4948628..4949518 Serratia proteamaculans 568 5606941 YP_001480697.1 CDS Spro_4475 NC_009832.1 4949812 4950219 R PFAM: phosphate-starvation-inducible E; KEGG: yen:YE3869 hypothetical protein; phosphate-starvation-inducible protein PsiE complement(4949812..4950219) Serratia proteamaculans 568 5606942 YP_001480698.1 CDS Spro_4476 NC_009832.1 4950441 4951874 D KEGG: kpn:KPN_02513 hypothetical protein; hypothetical protein 4950441..4951874 Serratia proteamaculans 568 5602561 YP_001480699.1 CDS pgi NC_009832.1 4951937 4953583 R functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase complement(4951937..4953583) Serratia proteamaculans 568 5602562 YP_001480700.1 CDS Spro_4478 NC_009832.1 4953857 4955665 D PFAM: sodium/hydrogen exchanger; KEGG: asa:ASA_3754 sodium/hydrogen exchanger family protein; sodium/hydrogen exchanger 4953857..4955665 Serratia proteamaculans 568 5602563 YP_001480701.1 CDS Spro_4479 NC_009832.1 4956021 4957388 D catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; functions in amino acid biosynthesis; lysine sensitive; aspartate kinase III 4956021..4957388 Serratia proteamaculans 568 5602779 YP_001480702.1 CDS Spro_4480 NC_009832.1 4957533 4958450 D PFAM: Bile acid:sodium symporter; KEGG: kpn:KPN_04411 putative cytochrome oxidase; bile acid:sodium symporter 4957533..4958450 Serratia proteamaculans 568 5602780 YP_001480703.1 CDS Spro_4481 NC_009832.1 4958837 4960513 D PFAM: Hemolysin activator HlyB domain protein; Polypeptide-transport-associated domain protein ShlB-type; KEGG: plu:plu0317 PhlA hemolysin secretion/activation protein PhlB; hemolysin activator HlyB domain-containing protein 4958837..4960513 Serratia proteamaculans 568 5602781 YP_001480704.1 CDS Spro_4482 NC_009832.1 4960559 4965406 D TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: Haemagluttinin repeat-containing protein; filamentous haemagglutinin domain protein; KEGG: yps:YPTB3652 hemolysin; filamentous hemagglutinin outer membrane protein 4960559..4965406 Serratia proteamaculans 568 5603088 YP_001480705.1 CDS Spro_4483 NC_009832.1 4965495 4967144 R TIGRFAM: sodium-dependent inorganic phosphate (Pi) transporter; Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter; KEGG: eca:ECA3983 putative sodium/phosphate cotransporter; sodium-dependent inorganic phosphate (Pi) transporter complement(4965495..4967144) Serratia proteamaculans 568 5603089 YP_001480706.1 CDS Spro_4484 NC_009832.1 4967272 4968264 R PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: pau:PA14_21910 putative ATP-binding component of ABC transporter; ABC transporter-like protein complement(4967272..4968264) Serratia proteamaculans 568 5603090 YP_001480707.1 CDS Spro_4485 NC_009832.1 4968268 4969053 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pap:PSPA7_1872 probable permease of ABC transporter; binding-protein-dependent transport systems inner membrane component complement(4968268..4969053) Serratia proteamaculans 568 5606526 YP_001480708.1 CDS Spro_4486 NC_009832.1 4969071 4969910 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfl:PFL_4389 ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component complement(4969071..4969910) Serratia proteamaculans 568 5606527 YP_001480709.1 CDS Spro_4487 NC_009832.1 4969920 4970717 R KEGG: pau:PA14_21940 hypothetical protein; hypothetical protein complement(4969920..4970717) Serratia proteamaculans 568 5606528 YP_001480710.1 CDS Spro_4488 NC_009832.1 4970729 4971790 R PFAM: extracellular solute-binding protein family 1; KEGG: pau:PA14_21960 putative ABC transporter, periplasmic substrate-binding protein; extracellular solute-binding protein complement(4970729..4971790) Serratia proteamaculans 568 5607178 YP_001480711.1 CDS Spro_4489 NC_009832.1 4971982 4972692 D PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: pmy:Pmen_1333 transcriptional regulator, GntR family; GntR family transcriptional regulator 4971982..4972692 Serratia proteamaculans 568 5607179 YP_001480712.1 CDS metH NC_009832.1 4972730 4976359 R one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; B12-dependent methionine synthase complement(4972730..4976359) Serratia proteamaculans 568 5607180 YP_001480713.1 CDS Spro_4491 NC_009832.1 4976624 4977454 D regulates the glyoxylate bypass operon (aceBAK), which encodes isocitrate lyase, malate synthase and isocitrate dehydrogenase kinase/phosphorylase; transcriptional repressor IclR 4976624..4977454 Serratia proteamaculans 568 5607118 YP_001480714.1 CDS Spro_4492 NC_009832.1 4977787 4978683 D KEGG: ppr:PBPRA2781 hypothetical protein; hypothetical protein 4977787..4978683 Serratia proteamaculans 568 5607119 YP_001480715.1 CDS Spro_4493 NC_009832.1 4979034 4979927 D phosphotriesterase homology protein; PhP; YhfV; member of a family of proteins related to phosphotriesterase (PTE); putative hydrolase 4979034..4979927 Serratia proteamaculans 568 5607120 YP_001480716.1 CDS Spro_4494 NC_009832.1 4979933 4980286 D KEGG: sbo:SBO_3365 hypothetical protein; hypothetical protein 4979933..4980286 Serratia proteamaculans 568 5607445 YP_001480717.1 CDS Spro_4495 NC_009832.1 4980297 4981598 D KEGG: yen:YE1040 putative integral membrane protein; putative integral membrane protein 4980297..4981598 Serratia proteamaculans 568 5607446 YP_001480718.1 CDS Spro_4496 NC_009832.1 4981659 4982522 D PFAM: phosphoesterase PA-phosphatase related; KEGG: reh:H16_B1238 acid phosphatase; acid phosphatase 4981659..4982522 Serratia proteamaculans 568 5607447 YP_001480719.1 CDS gntK NC_009832.1 4982800 4983339 D thermoresistant; catalyzes the formation of 6-phospho-D-gluconate from gluconate; gluconate kinase 1 4982800..4983339 Serratia proteamaculans 568 5607453 YP_001480720.1 CDS Spro_4498 NC_009832.1 4983336 4984673 D TIGRFAM: gluconate transporter; PFAM: Gluconate transporter; Citrate transporter; KEGG: plu:plu0498 low-affinity gluconate transporter (gluconate permease) (Gnt-I system); gluconate transporter 4983336..4984673 Serratia proteamaculans 568 5607454 YP_001480721.1 CDS Spro_4499 NC_009832.1 4984783 4986597 D catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate; phosphogluconate dehydratase 4984783..4986597 Serratia proteamaculans 568 5607455 YP_001480722.1 CDS Spro_4500 NC_009832.1 4986654 4987295 D catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate; keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase 4986654..4987295 Serratia proteamaculans 568 5607460 YP_001480723.1 CDS aceK NC_009832.1 4987326 4989080 R catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity; unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol; bifunctional isocitrate dehydrogenase kinase/phosphatase protein complement(4987326..4989080) Serratia proteamaculans 568 5607461 YP_001480724.1 CDS Spro_4502 NC_009832.1 4989151 4990458 R TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; KEGG: ypi:YpsIP31758_0295 isocitrate lyase; isocitrate lyase complement(4989151..4990458) Serratia proteamaculans 568 5607462 YP_001480725.1 CDS Spro_4503 NC_009832.1 4990506 4992104 R Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle; malate synthase complement(4990506..4992104) Serratia proteamaculans 568 5606216 YP_001480726.1 CDS Spro_4504 NC_009832.1 4992491 4993420 R catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis; homoserine O-succinyltransferase complement(4992491..4993420) Serratia proteamaculans 568 5606217 YP_001480727.1 CDS Spro_4505 NC_009832.1 4999527 5000069 D KEGG: yen:YE3883 putative transferase; putative transferase 4999527..5000069 Serratia proteamaculans 568 5602678 YP_001480728.1 CDS aroE NC_009832.1 5000107 5000925 R AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase complement(5000107..5000925) Serratia proteamaculans 568 5605842 YP_001480729.1 CDS Spro_4507 NC_009832.1 5000937 5001506 R RimN; YrdC; required for maturation of 16s RNA; binds preferentially double stranded RNA; putative ribosome maturation factor complement(5000937..5001506) Serratia proteamaculans 568 5605843 YP_001480730.1 CDS Spro_4508 NC_009832.1 5001514 5002059 R PFAM: DNA topoisomerase type IA zn finger domain protein; KEGG: kpn:KPN_03684 putative DNA topoisomerase; DNA topoisomerase type IA Zn finger domain-containing protein complement(5001514..5002059) Serratia proteamaculans 568 5605844 YP_001480731.1 CDS Spro_4509 NC_009832.1 5002085 5002558 R PFAM: protein of unknown function DUF494; KEGG: eca:ECA3997 Smg protein; hypothetical protein complement(5002085..5002558) Serratia proteamaculans 568 5607372 YP_001480732.1 CDS Spro_4510 NC_009832.1 5002530 5003651 R TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: yen:YE3888 hypothetical protein; DNA protecting protein DprA complement(5002530..5003651) Serratia proteamaculans 568 5607373 YP_001480733.1 CDS def NC_009832.1 5003785 5004294 D cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 5003785..5004294 Serratia proteamaculans 568 5607374 YP_001480734.1 CDS fmt NC_009832.1 5004312 5005256 D modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase 5004312..5005256 Serratia proteamaculans 568 5603906 YP_001480735.1 CDS Spro_4513 NC_009832.1 5005330 5006619 D catalyzes the methylation of cytosine at position 967 (m5C967) of 16S rRNA; SAM-dependent methyltransferase; 16S rRNA methyltransferase B 5005330..5006619 Serratia proteamaculans 568 5603907 YP_001480736.1 CDS trkA NC_009832.1 5006697 5008073 D involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; potassium transporter peripheral membrane component 5006697..5008073 Serratia proteamaculans 568 5603908 YP_001480737.1 CDS mscL NC_009832.1 5008214 5008630 D forms homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel 5008214..5008630 Serratia proteamaculans 568 5606039 YP_001480738.1 CDS Spro_4516 NC_009832.1 5008688 5008894 R PFAM: protein of unknown function DUF331; KEGG: yen:YE3894 hypothetical protein; hypothetical protein complement(5008688..5008894) Serratia proteamaculans 568 5606040 YP_001480739.1 CDS zntR NC_009832.1 5008979 5009410 R mediates expression of the zinc export protein ZntA in response to high levels of zinc; member of MerR family of transcriptional regulators; zinc-responsive transcriptional regulator complement(5008979..5009410) Serratia proteamaculans 568 5606041 YP_001480740.1 CDS rplQ NC_009832.1 5009606 5009995 R is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 complement(5009606..5009995) Serratia proteamaculans 568 5606665 YP_001480741.1 CDS Spro_4519 NC_009832.1 5010036 5011025 R catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha complement(5010036..5011025) Serratia proteamaculans 568 5606666 YP_001480742.1 CDS rpsD NC_009832.1 5011051 5011671 R primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 complement(5011051..5011671) Serratia proteamaculans 568 5606667 YP_001480743.1 CDS Spro_4521 NC_009832.1 5011703 5012092 R located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 complement(5011703..5012092) Serratia proteamaculans 568 5605304 YP_001480744.1 CDS rpsM NC_009832.1 5012109 5012465 R located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 complement(5012109..5012465) Serratia proteamaculans 568 5605305 YP_001480745.1 CDS secY NC_009832.1 5012761 5014092 R forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY complement(5012761..5014092) Serratia proteamaculans 568 5602679 YP_001480746.1 CDS rplO NC_009832.1 5014100 5014534 R late assembly protein; 50S ribosomal protein L15 complement(5014100..5014534) Serratia proteamaculans 568 5607261 YP_001480747.1 CDS rpmD NC_009832.1 5014538 5014717 R L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 complement(5014538..5014717) Serratia proteamaculans 568 5607262 YP_001480748.1 CDS rpsE NC_009832.1 5014720 5015223 R located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 complement(5014720..5015223) Serratia proteamaculans 568 5607263 YP_001480749.1 CDS rplR NC_009832.1 5015238 5015591 R binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 complement(5015238..5015591) Serratia proteamaculans 568 5607274 YP_001480750.1 CDS rplF NC_009832.1 5015601 5016134 R ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 complement(5015601..5016134) Serratia proteamaculans 568 5607275 YP_001480751.1 CDS rpsH NC_009832.1 5016149 5016541 R binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 complement(5016149..5016541) Serratia proteamaculans 568 5607276 YP_001480752.1 CDS rpsN NC_009832.1 5016572 5016877 R located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 complement(5016572..5016877) Serratia proteamaculans 568 5606648 YP_001480753.1 CDS rplE NC_009832.1 5016891 5017430 R part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 complement(5016891..5017430) Serratia proteamaculans 568 5606649 YP_001480754.1 CDS rplX NC_009832.1 5017445 5017759 R assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 complement(5017445..5017759) Serratia proteamaculans 568 5606650 YP_001480755.1 CDS rplN NC_009832.1 5017770 5018141 R binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 complement(5017770..5018141) Serratia proteamaculans 568 5602479 YP_001480756.1 CDS rpsQ NC_009832.1 5018307 5018561 R primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 complement(5018307..5018561) Serratia proteamaculans 568 5602480 YP_001480757.1 CDS Spro_4536 NC_009832.1 5018562 5018753 R one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 complement(5018562..5018753) Serratia proteamaculans 568 5602481 YP_001480758.1 CDS rplP NC_009832.1 5018753 5019163 R located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 complement(5018753..5019163) Serratia proteamaculans 568 5603538 YP_001480759.1 CDS rpsC NC_009832.1 5019176 5019874 R forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 complement(5019176..5019874) Serratia proteamaculans 568 5603539 YP_001480760.1 CDS rplV NC_009832.1 5019892 5020224 R binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 complement(5019892..5020224) Serratia proteamaculans 568 5603540 YP_001480761.1 CDS Spro_4540 NC_009832.1 5020239 5020388 R PFAM: ribosomal protein S19/S15; KEGG: plu:plu4722 30S ribosomal protein S19; 30S ribosomal protein S19/S15 complement(5020239..5020388) Serratia proteamaculans 568 5603652 YP_001480762.1 CDS rplB NC_009832.1 5020532 5021356 R one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 complement(5020532..5021356) Serratia proteamaculans 568 5603653 YP_001480763.1 CDS rplW NC_009832.1 5021375 5021677 R binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 complement(5021375..5021677) Serratia proteamaculans 568 5603654 YP_001480764.1 CDS rplD NC_009832.1 5021674 5022279 R L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 complement(5021674..5022279) Serratia proteamaculans 568 5603805 YP_001480765.1 CDS rplC NC_009832.1 5022290 5022919 R binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 complement(5022290..5022919) Serratia proteamaculans 568 5603806 YP_001480766.1 CDS Spro_4545 NC_009832.1 5022952 5023263 R PFAM: ribosomal protein S10; KEGG: ypi:YpsIP31758_3916 ribosomal protein S10; 30S ribosomal protein S10 complement(5022952..5023263) Serratia proteamaculans 568 5603807 YP_001480767.1 CDS Spro_4546 NC_009832.1 5023670 5024134 R iron storage protein; bacterioferritin complement(5023670..5024134) Serratia proteamaculans 568 5607463 YP_001480768.1 CDS Spro_4547 NC_009832.1 5024209 5024379 R PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: yps:YPTB3701 putative bacterioferritin-associated ferredoxin; BFD/(2Fe-2S)-binding domain-containing protein complement(5024209..5024379) Serratia proteamaculans 568 5607464 YP_001480769.1 CDS Spro_4548 NC_009832.1 5024536 5025720 R EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu complement(5024536..5025720) Serratia proteamaculans 568 5607465 YP_001480770.1 CDS Spro_4549 NC_009832.1 5025791 5027905 R EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G complement(5025791..5027905) Serratia proteamaculans 568 5603197 YP_001480771.1 CDS Spro_4550 NC_009832.1 5028003 5028473 R binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 complement(5028003..5028473) Serratia proteamaculans 568 5603198 YP_001480772.1 CDS rpsL NC_009832.1 5028570 5028944 R interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 complement(5028570..5028944) Serratia proteamaculans 568 5603199 YP_001480773.1 CDS Spro_4552 NC_009832.1 5029087 5029374 R in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs; sulfur transfer complex subunit TusB complement(5029087..5029374) Serratia proteamaculans 568 5604660 YP_001480774.1 CDS Spro_4553 NC_009832.1 5029384 5029743 R in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs; sulfur relay protein TusC complement(5029384..5029743) Serratia proteamaculans 568 5604661 YP_001480775.1 CDS Spro_4554 NC_009832.1 5029752 5030141 R in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs; sulfur transfer complex subunit TusD complement(5029752..5030141) Serratia proteamaculans 568 5604662 YP_001480776.1 CDS Spro_4555 NC_009832.1 5030141 5030863 R PFAM: YheO domain protein; KEGG: yen:YE3934 putative DNA-binding protein; YheO domain-containing protein complement(5030141..5030863) Serratia proteamaculans 568 5603100 YP_001480777.1 CDS Spro_4556 NC_009832.1 5031264 5032097 R rotamase; FKBP-type peptidyl-prolyl cis-trans isomerase complement(5031264..5032097) Serratia proteamaculans 568 5603101 YP_001480778.1 CDS Spro_4557 NC_009832.1 5032467 5032694 D PFAM: SlyX family protein; KEGG: ype:YPO0194 SlyX protein; SlyX family protein 5032467..5032694 Serratia proteamaculans 568 5603102 YP_001480779.1 CDS Spro_4558 NC_009832.1 5032755 5033357 R rotamase; FKBP-type peptidyl-prolyl cis-trans isomerase complement(5032755..5033357) Serratia proteamaculans 568 5605002 YP_001480780.1 CDS Spro_4559 NC_009832.1 5033480 5033683 R PFAM: conserved hypothetical protein; KEGG: yen:YE3939 hypothetical protein; hypothetical protein complement(5033480..5033683) Serratia proteamaculans 568 5605003 YP_001480781.1 CDS Spro_4560 NC_009832.1 5033698 5035506 R involved in potassium efflux; glutathione-regulated potassium-efflux system protein KefB complement(5033698..5035506) Serratia proteamaculans 568 5605004 YP_001480782.1 CDS Spro_4561 NC_009832.1 5035509 5036060 R required for KefB activity; glutathione-regulated potassium-efflux system ancillary protein KefG complement(5035509..5036060) Serratia proteamaculans 568 5602661 YP_001480783.1 CDS Spro_4562 NC_009832.1 5036194 5038107 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: yen:YE3942 putative ATPase component of an ABC transporter; putative ABC transporter ATP-binding protein 5036194..5038107 Serratia proteamaculans 568 5602662 YP_001480784.1 CDS tauD NC_009832.1 5038104 5038952 R catalyzes the conversion of taurine (2-aminoethanesulfonate) to sulfite and aminoacetaldehyde concurrently with the conversion of alpha-ketoglutarate to succinate and carbon dioxide; non-heme iron oxidase; allows the use of taurine as an alternative sulfur source; forms homodimers; taurine dioxygenase complement(5038104..5038952) Serratia proteamaculans 568 5602663 YP_001480785.1 CDS Spro_4564 NC_009832.1 5038949 5039788 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypi:YpsIP31758_3936 taurine ABC transporter, permease protein; taurine transporter subunit complement(5038949..5039788) Serratia proteamaculans 568 5606989 YP_001480786.1 CDS tauB NC_009832.1 5039785 5040552 R Part of the ABC transporter complex tauABC involved in taurine import; taurine transporter ATP-binding subunit complement(5039785..5040552) Serratia proteamaculans 568 5606990 YP_001480787.1 CDS tauA NC_009832.1 5040562 5041557 R with TauB and TauC is responsible for taurine uptake.; taurine transporter substrate binding subunit complement(5040562..5041557) Serratia proteamaculans 568 5606991 YP_001480788.1 CDS Spro_4567 NC_009832.1 5041665 5042786 R PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bra:BRADO0445 putative oxidoreductase/dehydrogenase protein; oxidoreductase domain-containing protein complement(5041665..5042786) Serratia proteamaculans 568 5607162 YP_001480789.1 CDS Spro_4568 NC_009832.1 5042783 5043847 R PFAM: AP endonuclease 2 domain protein; Xylose isomerase domain protein TIM barrel; KEGG: kpn:KPN_00539 putative xylose isomerase-like TIM barrel; xylose isomerase domain-containing protein complement(5042783..5043847) Serratia proteamaculans 568 5607163 YP_001480790.1 CDS Spro_4569 NC_009832.1 5043844 5044923 R PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; KEGG: rba:RB3338 probable myo-inositol 2-dehydrogenase; oxidoreductase domain-containing protein complement(5043844..5044923) Serratia proteamaculans 568 5607164 YP_001480791.1 CDS Spro_4570 NC_009832.1 5044916 5046175 R PFAM: nucleoside:H symporter; major facilitator superfamily MFS_1; KEGG: asu:Asuc_0358 nucleoside:H symporter; nucleoside:H symporter complement(5044916..5046175) Serratia proteamaculans 568 5607133 YP_001480792.1 CDS Spro_4571 NC_009832.1 5046207 5046740 R hypothetical protein complement(5046207..5046740) Serratia proteamaculans 568 5607134 YP_001480793.1 CDS Spro_4572 NC_009832.1 5046801 5047124 R hypothetical protein complement(5046801..5047124) Serratia proteamaculans 568 5607135 YP_001480794.1 CDS Spro_4573 NC_009832.1 5047368 5048348 D PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: eca:ECA1397 LacI-family transcriptional regulator; LacI family transcription regulator 5047368..5048348 Serratia proteamaculans 568 5607277 YP_001480795.1 CDS Spro_4574 NC_009832.1 5048349 5049131 R TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: yen:YE3949 hypothetical protein; PhzF family phenazine biosynthesis protein complement(5048349..5049131) Serratia proteamaculans 568 5607278 YP_001480796.1 CDS Spro_4575 NC_009832.1 5049142 5049744 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: eca:ECA4059 hypothetical protein; lysine exporter protein LysE/YggA complement(5049142..5049744) Serratia proteamaculans 568 5607279 YP_001480797.1 CDS Spro_4576 NC_009832.1 5049863 5050843 D PFAM: alpha/beta hydrolase fold; KEGG: yen:YE3951 hypothetical protein; putative hydrolase 5049863..5050843 Serratia proteamaculans 568 5605708 YP_001480798.1 CDS Spro_4577 NC_009832.1 5050840 5051073 D PFAM: protein of unknown function UPF0270; KEGG: yen:YE3952 hypothetical protein; hypothetical protein 5050840..5051073 Serratia proteamaculans 568 5605709 YP_001480799.1 CDS Spro_4578 NC_009832.1 5051225 5052094 D PFAM: phosphoribulokinase/uridine kinase; KEGG: yen:YE3953 phosphoribulokinase 1; phosphoribulokinase 5051225..5052094 Serratia proteamaculans 568 5605710 YP_001480800.1 CDS Spro_4579 NC_009832.1 5052134 5052541 R PFAM: OsmC family protein; KEGG: ypi:YpsIP31758_3944 OsmC family protein; hypothetical protein complement(5052134..5052541) Serratia proteamaculans 568 5605278 YP_001480801.1 CDS Spro_4580 NC_009832.1 5052921 5053553 D complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons; cAMP-regulatory protein 5052921..5053553 Serratia proteamaculans 568 5605279 YP_001480802.1 CDS Spro_4581 NC_009832.1 5053593 5055683 D TIGRFAM: integral membrane protein, YccS/YhfK family; PFAM: protein of unknown function DUF893 YccS/YhfK; KEGG: ent:Ent638_3785 integral membrane protein, YccS/YhfK family; YccS/YhfK family integral membrane protein 5053593..5055683 Serratia proteamaculans 568 5605280 YP_001480803.1 CDS argD NC_009832.1 5055721 5056938 R DapATase; bifunctional enzyme that functions in arginine and lysine biosynthetic pathways; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2,6-diaminoheptanedioate; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein complement(5055721..5056938) Serratia proteamaculans 568 5604375 YP_001480804.1 CDS Spro_4583 NC_009832.1 5057070 5057645 R aminodeoxychorismate synthase subunit PabA; with PabB catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine in para-aminobenzoate synthesis; PabA provides the glutamine amidotransferase activity; para-aminobenzoate synthase component II complement(5057070..5057645) Serratia proteamaculans 568 5604376 YP_001480805.1 CDS Spro_4584 NC_009832.1 5057744 5059270 R PFAM: protein of unknown function DUF853 NPT hydrolase putative; KEGG: ypi:YpsIP31758_3949 hypothetical protein; hypothetical protein complement(5057744..5059270) Serratia proteamaculans 568 5604377 YP_001480806.1 CDS Spro_4585 NC_009832.1 5059501 5059770 D KEGG: pmy:Pmen_3761 hypothetical protein; hypothetical protein 5059501..5059770 Serratia proteamaculans 568 5603930 YP_001480807.1 CDS Spro_4586 NC_009832.1 5059788 5060072 D TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; KEGG: neu:NE0552 hypothetical protein; addiction module antitoxin 5059788..5060072 Serratia proteamaculans 568 5603931 YP_001480808.1 CDS Spro_4587 NC_009832.1 5060073 5060798 R unknown function; when overproduced it confers drug-resistance; putative two-component response-regulatory protein YehT complement(5060073..5060798) Serratia proteamaculans 568 5603932 YP_001480809.1 CDS Spro_4588 NC_009832.1 5060798 5062483 R PFAM: ATP-binding region ATPase domain protein; histidine kinase internal region; 5TM Receptors of the LytS-YhcK type transmembrane region; SMART: GAF domain protein; KEGG: ecv:APECO1_4423 putative sensory kinase in two-component system with YehT; signal transduction histidine kinase LytS complement(5060798..5062483) Serratia proteamaculans 568 5607255 YP_001480810.1 CDS Spro_4589 NC_009832.1 5062645 5063214 R PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: yen:YE3960 peptidyl-prolyl cis-trans isomerase A; peptidyl-prolyl cis-trans isomerase A complement(5062645..5063214) Serratia proteamaculans 568 5607256 YP_001480811.1 CDS Spro_4590 NC_009832.1 5063569 5063913 D PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit; KEGG: plu:plu2756 PTS system, cellobiose-specific IIA component (EIIA-CEL) (cellobiose-permease IIA component) (phosphotransferase enzyme II, A component) (EIII-CEL); PTS system lactose/cellobiose-specific transporter subunit IIA 5063569..5063913 Serratia proteamaculans 568 5607257 YP_001480812.1 CDS Spro_4591 NC_009832.1 5063910 5065217 D PFAM: glycoside hydrolase family 4; KEGG: ypi:YpsIP31758_3951 6-phospho-beta-glucosidase; glycoside hydrolase family protein 5063910..5065217 Serratia proteamaculans 568 5607099 YP_001480813.1 CDS Spro_4592 NC_009832.1 5065310 5066293 D PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: ypi:YpsIP31758_3952 sugar-binding transcriptional regulator, LacI family; LacI family transcription regulator 5065310..5066293 Serratia proteamaculans 568 5607100 YP_001480814.1 CDS Spro_4593 NC_009832.1 5066484 5067668 D PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE3963 conserved integral membrane protein; hypothetical protein 5066484..5067668 Serratia proteamaculans 568 5607101 YP_001480815.1 CDS Spro_4594 NC_009832.1 5067736 5069004 R Catalyzes the deamination of cytosine to uracil and ammonia; cytosine deaminase complement(5067736..5069004) Serratia proteamaculans 568 5607047 YP_001480816.1 CDS Spro_4595 NC_009832.1 5069309 5071858 D TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: yen:YE3965 nitrite reductase; nitrite reductase (NAD(P)H), large subunit 5069309..5071858 Serratia proteamaculans 568 5607048 YP_001480817.1 CDS nirD NC_009832.1 5071855 5072181 D involved in reducing nitrite to ammonium to detoxify nitrite accumulation in anaerobic nitrate-respiring cells and regenerate NAD+; bounds to NirB, the cytoplasmic subunit, whose expression is induced at high nitrate concentrations; nitrite reductase small subunit 5071855..5072181 Serratia proteamaculans 568 5607049 YP_001480818.1 CDS Spro_4597 NC_009832.1 5072211 5073011 D member of the FNT family of formate and nitrite transporters; nitrite transporter NirC 5072211..5073011 Serratia proteamaculans 568 5606866 YP_001480819.1 CDS cysG NC_009832.1 5073061 5074464 D multifunction enzyme consisting of uroporphyrin-III C-methyltransferase, precorrin-2 dehydrogenase and sirohydrochlorin ferrochelatase; catalyzes the methylation of uroporphyrinogen III to form precorrin-2, then catalyzes formation of sirohydrochlorin from precorrin-2 and finally catalyzed the formation of siroheme from sirohydrochlorin; siroheme synthase 5073061..5074464 Serratia proteamaculans 568 5606867 YP_001480820.1 CDS Spro_4599 NC_009832.1 5074516 5075520 R catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase complement(5074516..5075520) Serratia proteamaculans 568 5606868 YP_001480821.1 CDS Spro_4600 NC_009832.1 5075523 5076221 R catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate; phosphoglycolate phosphatase complement(5075523..5076221) Serratia proteamaculans 568 5606124 YP_001480822.1 CDS Spro_4601 NC_009832.1 5076214 5076891 R PFAM: ribulose-phosphate 3-epimerase; KEGG: stm:STM3483 ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase complement(5076214..5076891) Serratia proteamaculans 568 5606125 YP_001480823.1 CDS Spro_4602 NC_009832.1 5076955 5077767 R KEGG: yen:YE3972 DNA adenine methylase; TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; DNA adenine methylase complement(5076955..5077767) Serratia proteamaculans 568 5606126 YP_001480824.1 CDS Spro_4603 NC_009832.1 5078023 5079045 R PFAM: Sporulation domain protein; KEGG: yen:YE3973 hypothetical protein; hypothetical protein complement(5078023..5079045) Serratia proteamaculans 568 5605907 YP_001480825.1 CDS aroB NC_009832.1 5079201 5080301 R catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase complement(5079201..5080301) Serratia proteamaculans 568 5605908 YP_001480826.1 CDS aroK NC_009832.1 5080393 5080914 R type I enzyme similar to type II but differentially regulated; major shikimate kinase in fully repressed cells; catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase I complement(5080393..5080914) Serratia proteamaculans 568 5605909 YP_001480827.1 CDS hofQ NC_009832.1 5081265 5082506 R outer membrane porin probably involved in uptake of extracellular double-stranded DNA; similar to outer membrane competence protein ComE from Haemophilus influenzae and outer membrane protein PilQ involved in type IV pilus production from Pseudomonas aeruginosa; putative outer membrane porin HofQ complement(5081265..5082506) Serratia proteamaculans 568 5605450 YP_001480828.1 CDS Spro_4607 NC_009832.1 5082503 5082865 R KEGG: eca:ECA4095 hypothetical protein; hypothetical protein complement(5082503..5082865) Serratia proteamaculans 568 5605451 YP_001480829.1 CDS Spro_4608 NC_009832.1 5082858 5083379 R hypothetical protein complement(5082858..5083379) Serratia proteamaculans 568 5605452 YP_001480830.1 CDS Spro_4609 NC_009832.1 5083372 5083908 R PFAM: Fimbrial assembly family protein; KEGG: ypp:YPDSF_0073 membrane protein; fimbrial assembly family protein complement(5083372..5083908) Serratia proteamaculans 568 5605157 YP_001480831.1 CDS Spro_4610 NC_009832.1 5083908 5084750 R KEGG: yps:YPTB3755 hypothetical protein; hypothetical protein complement(5083908..5084750) Serratia proteamaculans 568 5605158 YP_001480832.1 CDS mrcA NC_009832.1 5084873 5087431 D bifunctional murein transglycosylase/murein transpeptidase; penicillin-binding protein 1A; involved in the synthesis of cross-linked peptidoglycan from the lipid intermediates in cell wall formation; penicillin-insensitive transglycosylase catalyzes the formation of linear glycan strands and the penicillin-sensitive transpeptidase catalyzes the cross-linking of the peptide subunits; peptidoglycan synthetase 5084873..5087431 Serratia proteamaculans 568 5605159 YP_001480833.1 CDS nudE NC_009832.1 5087483 5088037 R ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose; ADP-ribose diphosphatase NudE complement(5087483..5088037) Serratia proteamaculans 568 5605145 YP_001480834.1 CDS Spro_4613 NC_009832.1 5088503 5090635 D PFAM: Intracellular growth attenuator IgaA; KEGG: yen:YE3982 hypothetical protein; intracellular growth attenuator IgaA 5088503..5090635 Serratia proteamaculans 568 5605146 YP_001480835.1 CDS Spro_4614 NC_009832.1 5090734 5091411 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: yen:YE3983 hypothetical protein; HAD family hydrolase 5090734..5091411 Serratia proteamaculans 568 5605147 YP_001480836.1 CDS Spro_4615 NC_009832.1 5091411 5091818 D PFAM: RNA-binding S4 domain protein; KEGG: yen:YE3984 heat shock protein 15; RNA-binding S4 domain-containing protein 5091411..5091818 Serratia proteamaculans 568 5604729 YP_001480837.1 CDS hslO NC_009832.1 5091844 5092722 D becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers; Hsp33-like chaperonin 5091844..5092722 Serratia proteamaculans 568 5604730 YP_001480838.1 CDS Spro_4617 NC_009832.1 5092919 5094538 D PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 5092919..5094538 Serratia proteamaculans 568 5604731 YP_001480839.1 CDS Spro_4618 NC_009832.1 5094664 5094927 D KEGG: pmy:Pmen_1046 hypothetical protein; hypothetical protein 5094664..5094927 Serratia proteamaculans 568 5604510 YP_001480840.1 CDS Spro_4619 NC_009832.1 5094924 5095403 D PFAM: PilT protein domain protein; KEGG: csa:Csal_1070 PilT protein-like protein; PilT domain-containing protein 5094924..5095403 Serratia proteamaculans 568 5604511 YP_001480841.1 CDS envZ NC_009832.1 5095420 5096799 R membrane-localized osmosensor; histidine kinase; in high osmolarity EnvZ autophosphorylates itself and transfers phosphoryl group to OmpR; osmolarity sensor protein complement(5095420..5096799) Serratia proteamaculans 568 5604512 YP_001480842.1 CDS ompR NC_009832.1 5096796 5097515 R part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of ompF; also functions in regulation of other genes; forms dimers upon phosphorylation; osmolarity response regulator complement(5096796..5097515) Serratia proteamaculans 568 5604657 YP_001480843.1 CDS Spro_4622 NC_009832.1 5097847 5098791 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RSc2243 probable transcription regulator protein; LysR family transcriptional regulator complement(5097847..5098791) Serratia proteamaculans 568 5604658 YP_001480844.1 CDS Spro_4623 NC_009832.1 5098905 5100395 D PFAM: aldehyde dehydrogenase; KEGG: bur:Bcep18194_B3062 aldehyde dehydrogenase; aldehyde dehydrogenase 5098905..5100395 Serratia proteamaculans 568 5604659 YP_001480845.1 CDS Spro_4624 NC_009832.1 5100396 5101430 D PFAM: Cupin 2 conserved barrel domain protein; KEGG: swi:Swit_3059 gentisate 1,2-dioxygenase; cupin 2 domain-containing protein 5100396..5101430 Serratia proteamaculans 568 5603959 YP_001480846.1 CDS Spro_4625 NC_009832.1 5101500 5102363 D PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: pna:Pnap_2474 5-carboxymethyl-2-hydroxymuconate delta-isomerase; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase 5101500..5102363 Serratia proteamaculans 568 5603960 YP_001480847.1 CDS greB NC_009832.1 5102449 5102922 D necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreB 5102449..5102922 Serratia proteamaculans 568 5603961 YP_001480848.1 CDS Spro_4627 NC_009832.1 5103204 5105537 D PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: yen:YE4000 putative transcription accessory protein; RNA-binding S1 domain-containing protein 5103204..5105537 Serratia proteamaculans 568 5604451 YP_001480849.1 CDS feoA NC_009832.1 5106180 5106404 D PFAM: FeoA family protein; KEGG: yen:YE3999 hypothetical ferrous iron transport protein A; ferrous iron transport protein A 5106180..5106404 Serratia proteamaculans 568 5604452 YP_001480850.1 CDS feoB NC_009832.1 5106476 5108791 D cytoplasmic membrane ferrous uptake system permease; mutations disrupt the ability of Escherichia coli to take up ferrous iron; GTP-binding protein which requires GTP for efficient iron(II) uptake; ferrous iron transport protein B 5106476..5108791 Serratia proteamaculans 568 5604453 YP_001480851.1 CDS Spro_4630 NC_009832.1 5108791 5109030 D PFAM: Protein of unknown function DUF1920; KEGG: yen:YE3997 ferrous iron transport protein C; hypothetical protein 5108791..5109030 Serratia proteamaculans 568 5604260 YP_001480852.1 CDS Spro_4631 NC_009832.1 5109085 5109366 R PFAM: protein of unknown function DUF1471; KEGG: ypi:YpsIP31758_3987 hypothetical protein; hypothetical protein complement(5109085..5109366) Serratia proteamaculans 568 5604261 YP_001480853.1 CDS Spro_4632 NC_009832.1 5109611 5110405 R TIGRFAM: bioH protein; PFAM: alpha/beta hydrolase fold; KEGG: eca:ECA4132 putative biotin biosynthesis protein; bioH protein complement(5109611..5110405) Serratia proteamaculans 568 5604262 YP_001480854.1 CDS Spro_4633 NC_009832.1 5110448 5111131 D involved in high-affinity gluconate transport; gluconate periplasmic binding protein 5110448..5111131 Serratia proteamaculans 568 5604044 YP_001480855.1 CDS Spro_4634 NC_009832.1 5111199 5111774 D cytoplasmic protein that may be involved in the utilization of double-stranded DNA as a carbon source; putative DNA uptake protein 5111199..5111774 Serratia proteamaculans 568 5604045 YP_001480856.1 CDS malQ NC_009832.1 5111857 5113947 R amylomaltase; acts to release glucose from maltodextrins; 4-alpha-glucanotransferase complement(5111857..5113947) Serratia proteamaculans 568 5604046 YP_001480857.1 CDS Spro_4636 NC_009832.1 5113957 5116362 R KEGG: yen:YE3991 phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; glycogen/starch/alpha-glucan phosphorylase complement(5113957..5116362) Serratia proteamaculans 568 5607130 YP_001480858.1 CDS Spro_4637 NC_009832.1 5116907 5119621 D Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides; transcriptional regulator MalT 5116907..5119621 Serratia proteamaculans 568 5607131 YP_001480859.1 CDS glpE NC_009832.1 5120247 5120573 D belongs to rhodanese family; thiosulfate thiotransferase; in Escherichia coli this enzyme catalyzes the formation of thiocyanate from thiosulfate and cyanide with low efficiency; contains an active site cysteine; thiosulfate sulfurtransferase 5120247..5120573 Serratia proteamaculans 568 5607132 YP_001480860.1 CDS Spro_4639 NC_009832.1 5120740 5121576 D protease responsible for the cleavage between Ser and Asp residues of proteins in regions of high local hydrophilicity; intramembrane serine protease GlpG 5120740..5121576 Serratia proteamaculans 568 5603059 YP_001480861.1 CDS Spro_4640 NC_009832.1 5121613 5122371 D represses the glpD, glpFK, glpTQ, and glpACB operons involved in glycerol-3-phosphate metabolism; DNA-binding transcriptional repressor GlpR 5121613..5122371 Serratia proteamaculans 568 5603060 YP_001480862.1 CDS Spro_4641 NC_009832.1 5122408 5123409 R KEGG: dvu:DVU1708 hypothetical protein; hypothetical protein complement(5122408..5123409) Serratia proteamaculans 568 5603061 YP_001480863.1 CDS glpD NC_009832.1 5123795 5125303 D in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; glycerol-3-phosphate dehydrogenase 5123795..5125303 Serratia proteamaculans 568 5603091 YP_001480864.1 CDS Spro_4643 NC_009832.1 5125347 5127794 R KEGG: ypp:YPDSF_3303 glycogen phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; glycogen/starch/alpha-glucan phosphorylase complement(5125347..5127794) Serratia proteamaculans 568 5603092 YP_001480865.1 CDS glgA NC_009832.1 5127886 5129319 R catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose; glycogen synthase complement(5127886..5129319) Serratia proteamaculans 568 5603093 YP_001480866.1 CDS glgC NC_009832.1 5129460 5130737 R catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate; glucose-1-phosphate adenylyltransferase complement(5129460..5130737) Serratia proteamaculans 568 5603139 YP_001480867.1 CDS Spro_4646 NC_009832.1 5130750 5132735 R catalyzes the hydrolysis of the alpha-1,6-glucosidic linkages in partially depolymerized glycogen; glycogen debranching protein complement(5130750..5132735) Serratia proteamaculans 568 5603140 YP_001480868.1 CDS Spro_4647 NC_009832.1 5132732 5134918 R catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching enzyme complement(5132732..5134918) Serratia proteamaculans 568 5603141 YP_001480869.1 CDS Spro_4648 NC_009832.1 5135417 5136520 R catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase complement(5135417..5136520) Serratia proteamaculans 568 5603069 YP_001480870.1 CDS Spro_4649 NC_009832.1 5136759 5137352 D YhgN; Ec0197; hydrolyzes nucleoside triphosphates with an O6 atom-containing purine base to nucleoside monophosphate and pyrophosphate; seems to play a role in the elimination of aberrant purine-derived nucleotides containing the 6-keto group; shows preference for deoxyinosine triphosphate and xanthosine triphosphate over standard nucleoside triphosphates (dATP, dCTP, dGTP, and dTTP); putative dITP- and XTP- hydrolase 5136759..5137352 Serratia proteamaculans 568 5603070 YP_001480871.1 CDS gntK NC_009832.1 5137401 5137928 R thermoresistant; catalyzes the formation of 6-phospho-D-gluconate from gluconate; gluconate kinase 1 complement(5137401..5137928) Serratia proteamaculans 568 5603071 YP_001480872.1 CDS Spro_4651 NC_009832.1 5138033 5139349 R TIGRFAM: gluconate transporter; PFAM: Gluconate transporter; Citrate transporter; KEGG: ypp:YPDSF_3319 gluconate permease; gluconate transporter complement(5138033..5139349) Serratia proteamaculans 568 5602617 YP_001480873.1 CDS Spro_4652 NC_009832.1 5139679 5140710 R PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: yps:YPTB3798 gluconate utilization system Gnt-I transcriptional repressor; LacI family transcription regulator complement(5139679..5140710) Serratia proteamaculans 568 5602618 YP_001480874.1 CDS Spro_4653 NC_009832.1 5140806 5141501 R PFAM: Pirin domain protein; Cupin 2 conserved barrel domain protein; KEGG: ypi:YpsIP31758_4023 YhhW family protein; pirin domain-containing protein complement(5140806..5141501) Serratia proteamaculans 568 5602619 YP_001480875.1 CDS Spro_4654 NC_009832.1 5141889 5142407 D PFAM: GCN5-related N-acetyltransferase; KEGG: yen:YE4024 hypothetical protein; GCN5-like N-acetyltransferase 5141889..5142407 Serratia proteamaculans 568 5603056 YP_001480876.1 CDS Spro_4655 NC_009832.1 5142539 5143582 D PFAM: peptidase S58 DmpA; KEGG: hne:HNE_3147 peptidase, T4 family; peptidase S58 DmpA 5142539..5143582 Serratia proteamaculans 568 5603057 YP_001480877.1 CDS Spro_4656 NC_009832.1 5143643 5144539 R PFAM: Xylose isomerase domain protein TIM barrel; KEGG: yen:YE4025 hypothetical protein; xylose isomerase domain-containing protein complement(5143643..5144539) Serratia proteamaculans 568 5603058 YP_001480878.1 CDS Spro_4657 NC_009832.1 5144599 5145483 R PFAM: Xylose isomerase domain protein TIM barrel; KEGG: kpn:KPN_04676 putative epimerase/isomerase; xylose isomerase domain-containing protein complement(5144599..5145483) Serratia proteamaculans 568 5602909 YP_001480879.1 CDS Spro_4658 NC_009832.1 5145523 5146536 R PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: yen:YE4026 myo-inositol 2-dehydrogenase; inositol 2-dehydrogenase complement(5145523..5146536) Serratia proteamaculans 568 5602910 YP_001480880.1 CDS Spro_4659 NC_009832.1 5146601 5148541 R PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: yen:YE4027 putative thiamine pyrophosphate-dependent protein; thiamine pyrophosphate protein central region complement(5146601..5148541) Serratia proteamaculans 568 5602911 YP_001480881.1 CDS Spro_4660 NC_009832.1 5149076 5151004 D PFAM: PfkB domain protein; KEGG: yen:YE4028 putative carbohydrate kinase; ribokinase-like domain-containing protein 5149076..5151004 Serratia proteamaculans 568 5603142 YP_001480882.1 CDS Spro_4661 NC_009832.1 5151202 5152038 D PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: yen:YE4029 hypothetical protein; RpiR family transcriptional regulator 5151202..5152038 Serratia proteamaculans 568 5603143 YP_001480883.1 CDS Spro_4662 NC_009832.1 5152156 5152977 R PFAM: Myo-inositol catabolism IolB domain protein; KEGG: yen:YE4030 hypothetical protein; myo-inositol catabolism IolB domain-containing protein complement(5152156..5152977) Serratia proteamaculans 568 5603144 YP_001480884.1 CDS Spro_4663 NC_009832.1 5153063 5154568 R TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: yen:YE4031 putative aldehyde dehydrogenase; methylmalonate-semialdehyde dehydrogenase complement(5153063..5154568) Serratia proteamaculans 568 5602990 YP_001480885.1 CDS Spro_4664 NC_009832.1 5155132 5156559 D KEGG: stm:STM4418 sugar transporter; TIGRFAM: sugar transporter; PFAM: General substrate transporter; major facilitator superfamily MFS_1; sugar transporter 5155132..5156559 Serratia proteamaculans 568 5602991 YP_001480886.1 CDS Spro_4665 NC_009832.1 5156606 5157442 D PFAM: Xylose isomerase domain protein TIM barrel; KEGG: stm:STM4435 putative cytoplasmic protein; xylose isomerase domain-containing protein 5156606..5157442 Serratia proteamaculans 568 5602992 YP_001480887.1 CDS Spro_4666 NC_009832.1 5157673 5158446 R PFAM: conserved hypothetical protein; KEGG: stm:STM0503 putative YbbM family transport protein, metal resistance protein; hypothetical protein complement(5157673..5158446) Serratia proteamaculans 568 5605549 YP_001480888.1 CDS Spro_4667 NC_009832.1 5158433 5159110 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: kpn:KPN_00468 putative ATP-binding component of a transport system; putative ABC transporter ATP-binding protein YbbL complement(5158433..5159110) Serratia proteamaculans 568 5605550 YP_001480889.1 CDS Spro_4668 NC_009832.1 5159294 5159506 R KEGG: plu:plu3508 hypothetical protein; hypothetical protein complement(5159294..5159506) Serratia proteamaculans 568 5605551 YP_001480890.1 CDS Spro_4669 NC_009832.1 5159591 5160739 R PFAM: peptidylprolyl isomerase FKBP-type; KEGG: ent:Ent638_0982 peptidylprolyl isomerase, FKBP-type; FKBP-type peptidylprolyl isomerase complement(5159591..5160739) Serratia proteamaculans 568 5603602 YP_001480891.1 CDS Spro_4670 NC_009832.1 5160742 5161155 R KEGG: kpn:KPN_00129 hypothetical protein; hypothetical protein complement(5160742..5161155) Serratia proteamaculans 568 5603603 YP_001480892.1 CDS Spro_4671 NC_009832.1 5161918 5162448 D PFAM: Fimbrial protein; KEGG: yps:YPTB3364 putative mannose-resistant Proteus-like fimbrial protein; fimbrial protein 5161918..5162448 Serratia proteamaculans 568 5603604 YP_001480893.1 CDS Spro_4672 NC_009832.1 5162536 5163087 D PFAM: Fimbrial protein; KEGG: aha:AHA_0519 fimbrial protein; fimbrial protein 5162536..5163087 Serratia proteamaculans 568 5606801 YP_001480894.1 CDS Spro_4673 NC_009832.1 5163201 5165687 D PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: aha:AHA_0521 outer membrane usher protein; fimbrial biogenesis outer membrane usher protein 5163201..5165687 Serratia proteamaculans 568 5606802 YP_001480895.1 CDS Spro_4674 NC_009832.1 5165710 5166462 D PFAM: pili assembly chaperone; KEGG: ypi:YpsIP31758_0615 chaperone protein PapD; pili assembly chaperone 5165710..5166462 Serratia proteamaculans 568 5606803 YP_001480896.1 CDS Spro_4675 NC_009832.1 5166474 5167088 D PFAM: Fimbrial protein; KEGG: plu:plu0769 MrfA protein; fimbrial protein 5166474..5167088 Serratia proteamaculans 568 5607219 YP_001480897.1 CDS Spro_4676 NC_009832.1 5167103 5168107 D KEGG: asa:ASA_3729 type I pilus assembly protein FimE; type I pilus assembly protein FimE 5167103..5168107 Serratia proteamaculans 568 5607220 YP_001480898.1 CDS Spro_4677 NC_009832.1 5168126 5168665 D PFAM: Fimbrial protein; KEGG: asa:ASA_3730 type I pilus assembly protein FimF; fimbrial protein 5168126..5168665 Serratia proteamaculans 568 5607221 YP_001480899.1 CDS Spro_4678 NC_009832.1 5168690 5170324 D PFAM: O-antigen polymerase; KEGG: asa:ASA_1459 lipid A core - O-antigen ligase; O-antigen polymerase 5168690..5170324 Serratia proteamaculans 568 5606520 YP_001480900.1 CDS Spro_4679 NC_009832.1 5170327 5170938 D PFAM: regulatory protein LuxR; KEGG: stt:t2311 fimbriae w protein; LuxR family transcriptional regulator 5170327..5170938 Serratia proteamaculans 568 5606521 YP_001480901.1 CDS Spro_4680 NC_009832.1 5170930 5171856 R KEGG: pen:PSEEN1860 hypothetical protein; hypothetical protein complement(5170930..5171856) Serratia proteamaculans 568 5606522 YP_001480902.1 CDS Spro_4681 NC_009832.1 5172000 5172422 D PFAM: regulatory protein AsnC/Lrp family; Helix-turn-helix type 11 domain protein; KEGG: aci:ACIAD1283 putative transcription regulator (AsnC family); AsnC family transcriptional regulator 5172000..5172422 Serratia proteamaculans 568 5606502 YP_001480903.1 CDS Spro_4682 NC_009832.1 5172528 5173289 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: fjo:Fjoh_3994 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(5172528..5173289) Serratia proteamaculans 568 5606503 YP_001480904.1 CDS Spro_4683 NC_009832.1 5173423 5174208 R hypothetical protein complement(5173423..5174208) Serratia proteamaculans 568 5606504 YP_001480905.1 CDS Spro_4684 NC_009832.1 5174273 5175244 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mms:mma_2322 transcriptional regulator, LysR family; LysR family transcriptional regulator 5174273..5175244 Serratia proteamaculans 568 5606017 YP_001480906.1 CDS Spro_4685 NC_009832.1 5175357 5177120 R PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; KEGG: tte:TTE2131 NADH:flavin oxidoreductase, Old Yellow enzyme family; NADH:flavin oxidoreductase/NADH oxidase complement(5175357..5177120) Serratia proteamaculans 568 5606018 YP_001480907.1 CDS Spro_4686 NC_009832.1 5177583 5178029 R KEGG: pap:PSPA7_4413 hypothetical protein; hypothetical protein complement(5177583..5178029) Serratia proteamaculans 568 5606019 YP_001480908.1 CDS Spro_4687 NC_009832.1 5178365 5179228 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bte:BTH_I2369 transcriptional regulator, AraC family domain protein; AraC family transcriptional regulator 5178365..5179228 Serratia proteamaculans 568 5606377 YP_001480909.1 CDS Spro_4688 NC_009832.1 5179233 5180474 R PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ypn:YPN_3615 hypothetical protein; hypothetical protein complement(5179233..5180474) Serratia proteamaculans 568 5606378 YP_001480910.1 CDS Spro_4689 NC_009832.1 5180729 5182231 D PFAM: phosphate transporter; KEGG: yen:YE4048 phosphate transport protein; phosphate transporter 5180729..5182231 Serratia proteamaculans 568 5606379 YP_001480911.1 CDS Spro_4690 NC_009832.1 5182306 5182689 R ppGpp-dependent, membrane associated, stress protein produced under conditions of nutrient deprivation, osmotic shock and oxidative stress; universal stress protein UspB complement(5182306..5182689) Serratia proteamaculans 568 5607096 YP_001480912.1 CDS Spro_4691 NC_009832.1 5183252 5183698 D PFAM: UspA domain protein; KEGG: sdy:SDY_3567 universal stress protein; broad regulatory function?; UspA domain-containing protein 5183252..5183698 Serratia proteamaculans 568 5607097 YP_001480913.1 CDS Spro_4692 NC_009832.1 5183895 5185229 D converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; glutamate dehydrogenase 5183895..5185229 Serratia proteamaculans 568 5607098 YP_001480914.1 CDS Spro_4693 NC_009832.1 5185569 5186555 D KEGG: ypi:YpsIP31758_0364 carbohydrate uptake (CUT2 family) ABC transporter, periplasmic carbohydrate-binding protein; carbohydrate ABC transporter periplasmic-binding protein 5185569..5186555 Serratia proteamaculans 568 5607395 YP_001480915.1 CDS Spro_4694 NC_009832.1 5186656 5188155 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ypi:YpsIP31758_0365 carbohydrate uptake (CUT2 family) ABC transporter, ATP-binding protein; ABC transporter-like protein 5186656..5188155 Serratia proteamaculans 568 5607396 YP_001480916.1 CDS Spro_4695 NC_009832.1 5188148 5189137 D PFAM: inner-membrane translocator; KEGG: ypi:YpsIP31758_0366 carbohydrate uptake (CUT2 family) ABC transporter, permease protein; monosaccharide-transporting ATPase 5188148..5189137 Serratia proteamaculans 568 5607397 YP_001480917.1 CDS Spro_4696 NC_009832.1 5189139 5190092 D PFAM: inner-membrane translocator; KEGG: ypi:YpsIP31758_0367 carbohydrate uptake (CUT2 family) ABC transporter, permease protein; monosaccharide-transporting ATPase 5189139..5190092 Serratia proteamaculans 568 5607077 YP_001480918.1 CDS Spro_4697 NC_009832.1 5190103 5191740 D TIGRFAM: FGGY-family pentulose kinase; PFAM: carbohydrate kinase FGGY; KEGG: ypi:YpsIP31758_0368 pentulose kinase, FGGY family; FGGY-family pentulose kinase 5190103..5191740 Serratia proteamaculans 568 5607078 YP_001480919.1 CDS Spro_4698 NC_009832.1 5191740 5192339 D PFAM: sugar isomerase (SIS); KEGG: ypi:YpsIP31758_0369 SIS domain protein; sugar isomerase (SIS) 5191740..5192339 Serratia proteamaculans 568 5607079 YP_001480920.1 CDS Spro_4699 NC_009832.1 5192384 5194234 R PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: eca:ECA0053 putative phosphodiesterase; 5'-nucleotidase domain-containing protein complement(5192384..5194234) Serratia proteamaculans 568 5607392 YP_001480921.1 CDS Spro_4700 NC_009832.1 5194432 5195178 R predicted SAM-dependent methyltransferase; putative methyltransferase complement(5194432..5195178) Serratia proteamaculans 568 5607393 YP_001480922.1 CDS Spro_4701 NC_009832.1 5195187 5197229 R PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: yps:YPTB3816 oligopeptidase A; oligopeptidase A complement(5195187..5197229) Serratia proteamaculans 568 5607394 YP_001480923.1 CDS Spro_4702 NC_009832.1 5197321 5198013 R PFAM: regulatory protein GntR HTH; KEGG: sde:Sde_1768 NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit; GntR family transcriptional regulator complement(5197321..5198013) Serratia proteamaculans 568 5607170 YP_001480924.1 CDS Spro_4703 NC_009832.1 5198056 5199333 R TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rsh:Rsph17029_0257 TRAP dicarboxylate transporter, DctM subunit; TRAP dicarboxylate transporter subunit DctM complement(5198056..5199333) Serratia proteamaculans 568 5607171 YP_001480925.1 CDS Spro_4704 NC_009832.1 5199330 5199800 R PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: ecv:APECO1_2070 C4-dicarboxylate transport system permease small protein; tripartite ATP-independent periplasmic transporter DctQ complement(5199330..5199800) Serratia proteamaculans 568 5607172 YP_001480926.1 CDS Spro_4705 NC_009832.1 5199855 5200841 R TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: oan:Oant_3902 TRAP dicarboxylate transporter, DctP subunit; TRAP dicarboxylate transporter subunit DctP complement(5199855..5200841) Serratia proteamaculans 568 5606890 YP_001480927.1 CDS Spro_4706 NC_009832.1 5200888 5201913 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: eca:ECA4382 putative zinc-binding dehydrogenase; alcohol dehydrogenase complement(5200888..5201913) Serratia proteamaculans 568 5606891 YP_001480928.1 CDS Spro_4707 NC_009832.1 5201903 5202676 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ent:Ent638_3295 2-deoxy-D-gluconate 3-dehydrogenase; short-chain dehydrogenase/reductase SDR complement(5201903..5202676) Serratia proteamaculans 568 5606892 YP_001480929.1 CDS Spro_4708 NC_009832.1 5202687 5203763 R PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: pol:Bpro_3962 mandelate racemase/muconate lactonizing enzyme; mandelate racemase/muconate lactonizing protein complement(5202687..5203763) Serratia proteamaculans 568 5605432 YP_001480930.1 CDS Spro_4709 NC_009832.1 5204067 5204528 R PFAM: histidine triad (HIT) protein; KEGG: stm:STM3167 putative diadenosine tetraphosphatehydrolase; histidine triad (HIT) protein complement(5204067..5204528) Serratia proteamaculans 568 5605433 YP_001480931.1 CDS Spro_4710 NC_009832.1 5204613 5206058 R PFAM: Amidase; KEGG: bte:BTH_II1476 6-aminohexanoate-cyclic-dimer hydrolase; amidase complement(5204613..5206058) Serratia proteamaculans 568 5605434 YP_001480932.1 CDS Spro_4711 NC_009832.1 5206205 5207083 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bpl:BURPS1106A_A0260 transcriptional regulator, LysR family; LysR family transcriptional regulator 5206205..5207083 Serratia proteamaculans 568 5606277 YP_001480933.1 CDS Spro_4712 NC_009832.1 5207084 5207488 R PFAM: protein of unknown function DUF437; KEGG: eca:ECA0252 hypothetical protein; hypothetical protein complement(5207084..5207488) Serratia proteamaculans 568 5606278 YP_001480934.1 CDS Spro_4713 NC_009832.1 5207624 5208466 D PFAM: protein of unknown function DUF519; KEGG: yen:YE4055 hypothetical protein; hypothetical protein 5207624..5208466 Serratia proteamaculans 568 5606279 YP_001480935.1 CDS Spro_4714 NC_009832.1 5208721 5210073 D catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense; glutathione reductase 5208721..5210073 Serratia proteamaculans 568 5606272 YP_001480936.1 CDS Spro_4715 NC_009832.1 5211111 5212748 R PFAM: O-antigen polymerase; KEGG: yen:YE0777 putative inner membrane protein; O-antigen polymerase complement(5211111..5212748) Serratia proteamaculans 568 5606273 YP_001480937.1 CDS Spro_4716 NC_009832.1 5212941 5213804 R KEGG: plu:plu0777 MrfH protein; hypothetical protein complement(5212941..5213804) Serratia proteamaculans 568 5606274 YP_001480938.1 CDS Spro_4717 NC_009832.1 5213811 5214353 R PFAM: Fimbrial protein; KEGG: plu:plu0776 MrfG protein; fimbrial protein complement(5213811..5214353) Serratia proteamaculans 568 5603425 YP_001480939.1 CDS Spro_4718 NC_009832.1 5214362 5214853 R KEGG: plu:plu0775 MrfF protein; MrfF protein complement(5214362..5214853) Serratia proteamaculans 568 5603426 YP_001480940.1 CDS Spro_4719 NC_009832.1 5214850 5215356 R KEGG: plu:plu0774 MrfE protein; MrfE protein complement(5214850..5215356) Serratia proteamaculans 568 5603427 YP_001480941.1 CDS Spro_4720 NC_009832.1 5215450 5216262 R hypothetical protein complement(5215450..5216262) Serratia proteamaculans 568 5606819 YP_001480942.1 CDS Spro_4721 NC_009832.1 5216299 5216961 R PFAM: Fimbrial protein; KEGG: plu:plu0773 MrfX protein; fimbrial protein complement(5216299..5216961) Serratia proteamaculans 568 5606820 YP_001480943.1 CDS Spro_4722 NC_009832.1 5217000 5217758 R PFAM: pili assembly chaperone; KEGG: yen:YE0782 pili chaperone protein; pili assembly chaperone complement(5217000..5217758) Serratia proteamaculans 568 5606821 YP_001480944.1 CDS Spro_4723 NC_009832.1 5217798 5220332 R PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: plu:plu0416 hypothetical protein; fimbrial biogenesis outer membrane usher protein complement(5217798..5220332) Serratia proteamaculans 568 5603569 YP_001480945.1 CDS Spro_4724 NC_009832.1 5220370 5220915 R PFAM: Fimbrial protein; KEGG: plu:plu0770 MrfB protein; fimbrial protein complement(5220370..5220915) Serratia proteamaculans 568 5603570 YP_001480946.1 CDS Spro_4725 NC_009832.1 5221003 5221566 R PFAM: Fimbrial protein; KEGG: yen:YE0779 putative mannose-resistant/Proteus-like fimbrial protein; fimbrial protein complement(5221003..5221566) Serratia proteamaculans 568 5603571 YP_001480947.1 CDS Spro_4726 NC_009832.1 5221986 5222753 D PFAM: transcriptional regulator domain protein; KEGG: eca:ECA0944 hypothetical protein; transcriptional regulator CadC 5221986..5222753 Serratia proteamaculans 568 5603072 YP_001480948.1 CDS Spro_4727 NC_009832.1 5222939 5223436 R hypothetical protein complement(5222939..5223436) Serratia proteamaculans 568 5603073 YP_001480949.1 CDS Spro_4728 NC_009832.1 5223414 5224184 R PFAM: transcriptional regulator domain protein; KEGG: eca:ECA0944 hypothetical protein; transcriptional regulator CadC complement(5223414..5224184) Serratia proteamaculans 568 5603074 YP_001480950.1 CDS Spro_4729 NC_009832.1 5225349 5226635 D TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: Haemagluttinin repeat-containing protein; filamentous haemagglutinin domain protein; KEGG: rso:RS02477 probable hemagglutinin-related protein; filamentous hemagglutinin outer membrane protein 5225349..5226635 Serratia proteamaculans 568 5602836 YP_001480951.1 CDS Spro_4730 NC_009832.1 5226688 5228340 D PFAM: Hemolysin activator HlyB domain protein; Polypeptide-transport-associated domain protein ShlB-type; KEGG: eca:ECA0391 putative activator or transporter protein of haemolysin-like protein; hemolysin activator HlyB domain-containing protein 5226688..5228340 Serratia proteamaculans 568 5602837 YP_001480952.1 CDS Spro_4731 NC_009832.1 5228390 5228962 R PFAM: DinB family protein; KEGG: bch:Bcen2424_1988 DinB family protein; DinB family protein complement(5228390..5228962) Serratia proteamaculans 568 5602838 YP_001480953.1 CDS Spro_4732 NC_009832.1 5229082 5229855 R PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: atc:AGR_pAT_203 hypothetical protein; AraC family transcriptional regulator complement(5229082..5229855) Serratia proteamaculans 568 5602742 YP_001480954.1 CDS Spro_4733 NC_009832.1 5229929 5230576 D KEGG: bxe:Bxe_B2768 hypothetical protein; hypothetical protein 5229929..5230576 Serratia proteamaculans 568 5602743 YP_001480955.1 CDS Spro_4734 NC_009832.1 5230738 5231232 D PFAM: oxidoreductase molybdopterin binding; KEGG: bxe:Bxe_B1772 hypothetical protein; molybdopterin-binding oxidoreductase 5230738..5231232 Serratia proteamaculans 568 5602744 YP_001480956.1 CDS Spro_4735 NC_009832.1 5231229 5233013 D PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sec:SC039 hypothetical protein; integral membrane sensor hybrid histidine kinase 5231229..5233013 Serratia proteamaculans 568 5603859 YP_001480957.1 CDS Spro_4736 NC_009832.1 5233003 5233854 R PFAM: response regulator receiver; BetR domain protein; KEGG: bxe:Bxe_B1770 response regulator receiver domain protein(CheY); response regulator receiver protein complement(5233003..5233854) Serratia proteamaculans 568 5603860 YP_001480958.1 CDS Spro_4737 NC_009832.1 5234327 5237428 R TIGRFAM: outer membrane autotransporter barrel domain; autotransporter-associated beta strand repeat protein; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; Autotransporter beta- domain protein; KEGG: pfo:Pfl_2684 outer membrane autotransporter barrel; outer membrane autotransporter complement(5234327..5237428) Serratia proteamaculans 568 5603861 YP_001480959.1 CDS Spro_4738 NC_009832.1 5237497 5240511 R TIGRFAM: outer membrane autotransporter barrel domain; autotransporter-associated beta strand repeat protein; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; Autotransporter beta- domain protein; KEGG: pfo:Pfl_2684 outer membrane autotransporter barrel; outer membrane autotransporter complement(5237497..5240511) Serratia proteamaculans 568 5603874 YP_001480960.1 CDS Spro_4739 NC_009832.1 5241004 5241657 R PFAM: regulatory protein TetR; KEGG: yps:YPTB0195 putative TetR-family regulatory protein; TetR family transcriptional regulator complement(5241004..5241657) Serratia proteamaculans 568 5603875 YP_001480961.1 CDS Spro_4740 NC_009832.1 5241914 5243143 D PFAM: protein of unknown function UPF0261; KEGG: yps:YPTB0196 hypothetical protein; hypothetical protein 5241914..5243143 Serratia proteamaculans 568 5603876 YP_001480962.1 CDS Spro_4741 NC_009832.1 5243217 5243717 R periplasmic protein induced by stress response via Cpx and BaeSR system; similar to CpxP; periplasmic protein complement(5243217..5243717) Serratia proteamaculans 568 5603894 YP_001480963.1 CDS Spro_4742 NC_009832.1 5244279 5246273 D c-di-GMP phosphodiesterase; probably degrades signalling molecule c-di-GMP; RNase II stability modulator 5244279..5246273 Serratia proteamaculans 568 5603895 YP_001480964.1 CDS Spro_4743 NC_009832.1 5246290 5247168 R regulator of pathogenicity factor RpfF; involved in synthesis of a diffusible signal factor involved in the regulation of extracellular enzymes; enoyl-CoA hydratase complement(5246290..5247168) Serratia proteamaculans 568 5603896 YP_001480965.1 CDS Spro_4744 NC_009832.1 5247497 5248516 D TIGRFAM: putative ribonuclease; PFAM: ribonuclease BN; KEGG: yen:YE4060 hypothetical protein; putative ribonuclease 5247497..5248516 Serratia proteamaculans 568 5603900 YP_001480966.1 CDS Spro_4745 NC_009832.1 5248845 5250167 D TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: eca:ECA0769 probable transporter; major facilitator superfamily metabolite/H(+) symporter 5248845..5250167 Serratia proteamaculans 568 5603901 YP_001480967.1 CDS Spro_4746 NC_009832.1 5250242 5251039 D PFAM: CDP-diacylglycerol pyrophosphatase; KEGG: yen:YE4061 CDP-diacylglycerol pyrophosphatase; CDP-diacylglycerol pyrophosphatase 5250242..5251039 Serratia proteamaculans 568 5603902 YP_001480968.1 CDS Spro_4747 NC_009832.1 5251069 5253105 R PFAM: AsmA family protein; KEGG: yen:YE4062 hypothetical protein; AsmA family protein complement(5251069..5253105) Serratia proteamaculans 568 5603936 YP_001480969.1 CDS Spro_4748 NC_009832.1 5253208 5254008 R in Escherichia coli this protein is involved in flagellar function; EAL domain-containing protein complement(5253208..5254008) Serratia proteamaculans 568 5603937 YP_001480970.1 CDS Spro_4749 NC_009832.1 5254138 5254341 D TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-oxalocrotonate tautomerase; KEGG: yps:YPTB3829 possible tautomerase enzyme; 4-oxalocrotonate tautomerase 5254138..5254341 Serratia proteamaculans 568 5603938 YP_001480971.1 CDS Spro_4750 NC_009832.1 5254507 5255439 D PFAM: PfkB domain protein; KEGG: ypi:YpsIP31758_4062 2-dehydro-3-deoxygluconokinase; ribokinase-like domain-containing protein 5254507..5255439 Serratia proteamaculans 568 5603732 YP_001480972.1 CDS Spro_4751 NC_009832.1 5255637 5257112 R catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase complement(5255637..5257112) Serratia proteamaculans 568 5603733 YP_001480973.1 CDS Spro_4752 NC_009832.1 5257262 5258176 D participates in controlling several genes involved in isoleucine and valine biosynthesis; activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate; DNA-binding transcriptional regulator IlvY 5257262..5258176 Serratia proteamaculans 568 5603734 YP_001480974.1 CDS Spro_4753 NC_009832.1 5258171 5258872 R KEGG: eca:ECA4224 hypothetical protein; hypothetical protein complement(5258171..5258872) Serratia proteamaculans 568 5604088 YP_001480975.1 CDS Spro_4754 NC_009832.1 5258895 5259473 R hypothetical protein complement(5258895..5259473) Serratia proteamaculans 568 5604089 YP_001480976.1 CDS Spro_4755 NC_009832.1 5259473 5260468 R KEGG: sfr:Sfri_3972 hypothetical protein; hypothetical protein complement(5259473..5260468) Serratia proteamaculans 568 5604090 YP_001480977.1 CDS Spro_4756 NC_009832.1 5260582 5262126 R threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway; threonine dehydratase complement(5260582..5262126) Serratia proteamaculans 568 5604254 YP_001480978.1 CDS Spro_4757 NC_009832.1 5262132 5263982 R catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase complement(5262132..5263982) Serratia proteamaculans 568 5604255 YP_001480979.1 CDS Spro_4758 NC_009832.1 5264088 5265014 R catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase complement(5264088..5265014) Serratia proteamaculans 568 5604256 YP_001480980.1 CDS ilvM NC_009832.1 5265037 5265294 R KEGG: yen:YE0149 acetolactate synthase isozyme II small subunit; acetolactate synthase 2 regulatory subunit complement(5265037..5265294) Serratia proteamaculans 568 5604321 YP_001480981.1 CDS Spro_4760 NC_009832.1 5265291 5266937 R catalyzes the formation of 2-acetolactate from pyruvate; also known as acetolactate synthase large subunit; acetolactate synthase 2 catalytic subunit complement(5265291..5266937) Serratia proteamaculans 568 5604322 YP_001480982.1 CDS Spro_4761 NC_009832.1 5267312 5268544 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: kpn:KPN_01755 putative transporter; major facilitator transporter complement(5267312..5268544) Serratia proteamaculans 568 5604323 YP_001480983.1 CDS Spro_4762 NC_009832.1 5268886 5270409 D KEGG: eca:ECA4230 probable magnesium-chelatase; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; Mg chelatase subunit ChlI 5268886..5270409 Serratia proteamaculans 568 5604504 YP_001480984.1 CDS Spro_4763 NC_009832.1 5270437 5270775 R PFAM: protein of unknown function DUF413; KEGG: yen:YE0146 hypothetical protein; hypothetical protein complement(5270437..5270775) Serratia proteamaculans 568 5604505 YP_001480985.1 CDS Spro_4764 NC_009832.1 5270889 5271722 D Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon; transcriptional regulator HdfR 5270889..5271722 Serratia proteamaculans 568 5604506 YP_001480986.1 CDS Spro_4765 NC_009832.1 5271727 5272719 R membrane component of a putative sugar ABC transporter system; inner membrane ABC transporter permease YjfF complement(5271727..5272719) Serratia proteamaculans 568 5604574 YP_001480987.1 CDS Spro_4766 NC_009832.1 5272716 5273738 R PFAM: inner-membrane translocator; KEGG: yps:YPTB0129 ABC ribose/sugar transporter, permease domain; monosaccharide-transporting ATPase complement(5272716..5273738) Serratia proteamaculans 568 5604575 YP_001480988.1 CDS Spro_4767 NC_009832.1 5273739 5275250 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ypp:YPDSF_3519 sugar transport system ATP-binding protein; ABC transporter-like protein complement(5273739..5275250) Serratia proteamaculans 568 5604576 YP_001480989.1 CDS Spro_4768 NC_009832.1 5275274 5276230 R PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: yen:YE0141 putative periplasmic protein precursor; periplasmic binding protein/LacI transcriptional regulator complement(5275274..5276230) Serratia proteamaculans 568 5604604 YP_001480990.1 CDS Spro_4769 NC_009832.1 5282532 5283395 R converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase complement(5282532..5283395) Serratia proteamaculans 568 5602457 YP_001480991.1 CDS btuB NC_009832.1 5283340 5285211 R involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space; vitamin B12/cobalamin outer membrane transporter complement(5283340..5285211) Serratia proteamaculans 568 5604606 YP_001480992.1 CDS Spro_4771 NC_009832.1 5285613 5286716 D catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs; tRNA (uracil-5-)-methyltransferase 5285613..5286716 Serratia proteamaculans 568 5604631 YP_001480993.1 CDS Spro_4772 NC_009832.1 5286761 5287129 R PFAM: protein of unknown function DUF1422; KEGG: eca:ECA4240 hypothetical protein; hypothetical protein complement(5286761..5287129) Serratia proteamaculans 568 5604632 YP_001480994.1 CDS Spro_4773 NC_009832.1 5287143 5287781 R negatively controls the expression of fabA and fabB, genes involved in the unsaturated fatty acid biosynthesis; DNA-binding transcriptional repressor FabR complement(5287143..5287781) Serratia proteamaculans 568 5604633 YP_001480995.1 CDS Spro_4774 NC_009832.1 5287993 5289390 D catalyzes the conversion of NADPH to NADH; soluble pyridine nucleotide transhydrogenase 5287993..5289390 Serratia proteamaculans 568 5604663 YP_001480996.1 CDS Spro_4775 NC_009832.1 5289373 5290290 R Activates the expression of a regulon of hydrogen peroxide-inducible genes such as katG, gor, ahpC, ahpF, oxyS, dps, fur and grxA; DNA-binding transcriptional regulator OxyR complement(5289373..5290290) Serratia proteamaculans 568 5604664 YP_001480997.1 CDS Spro_4776 NC_009832.1 5290442 5291173 D KEGG: yen:YE0132 putative peroxiredoxin/glutaredoxin family protein; TIGRFAM: glutaredoxin-family domain protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; glutaredoxin; glutaredoxin 2; Redoxin domain protein; glutaredoxin family protein 5290442..5291173 Serratia proteamaculans 568 5604665 YP_001480998.1 CDS Spro_4777 NC_009832.1 5291251 5292699 D Catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 5291251..5292699 Serratia proteamaculans 568 5604669 YP_001480999.1 CDS Spro_4778 NC_009832.1 5292764 5294137 R catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase complement(5292764..5294137) Serratia proteamaculans 568 5604670 YP_001481000.1 CDS Spro_4779 NC_009832.1 5294214 5295434 R catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase complement(5294214..5295434) Serratia proteamaculans 568 5604671 YP_001481001.1 CDS Spro_4780 NC_009832.1 5295460 5296233 R catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase complement(5295460..5296233) Serratia proteamaculans 568 5604720 YP_001481002.1 CDS argC NC_009832.1 5296263 5297267 R catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase complement(5296263..5297267) Serratia proteamaculans 568 5604721 YP_001481003.1 CDS Spro_4782 NC_009832.1 5297484 5298629 D catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis; acetylornithine deacetylase 5297484..5298629 Serratia proteamaculans 568 5604722 YP_001481004.1 CDS Spro_4783 NC_009832.1 5298888 5301524 D catalyzes the formation of oxaloacetate from phosphoenolpyruvate; phosphoenolpyruvate carboxylase 5298888..5301524 Serratia proteamaculans 568 5604816 YP_001481005.1 CDS metF NC_009832.1 5301631 5302524 R MTHFR; catalyzes NADH-linked reduction of 5,10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor; 5,10-methylenetetrahydrofolate reductase complement(5301631..5302524) Serratia proteamaculans 568 5604817 YP_001481006.1 CDS metL NC_009832.1 5302752 5305187 R multifunctional homodimeric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; bifunctional aspartate kinase II/homoserine dehydrogenase II complement(5302752..5305187) Serratia proteamaculans 568 5604818 YP_001481007.1 CDS Spro_4786 NC_009832.1 5305190 5306350 R catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine; cystathionine gamma-synthase complement(5305190..5306350) Serratia proteamaculans 568 5604939 YP_001481008.1 CDS Spro_4787 NC_009832.1 5306668 5306985 D when combined with S-adenosylmethionine represses the expression of the methionine regulon and of proteins involved in S-adenosylmethionine synthesis; transcriptional repressor protein MetJ 5306668..5306985 Serratia proteamaculans 568 5604940 YP_001481009.1 CDS rpmE NC_009832.1 5307067 5307282 R RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 complement(5307067..5307282) Serratia proteamaculans 568 5604941 YP_001481010.1 CDS Spro_4789 NC_009832.1 5307481 5309676 D binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA 5307481..5309676 Serratia proteamaculans 568 5604975 YP_001481011.1 CDS Spro_4790 NC_009832.1 5309965 5310993 D negatively controls the transcription initiation of genes such as deoCABD, udp, and cdd encoding catabolizing enzymes and nupC, nupG, and tsx encoding transporting and pore-forming proteins; DNA-binding transcriptional regulator CytR 5309965..5310993 Serratia proteamaculans 568 5604976 YP_001481012.1 CDS Spro_4791 NC_009832.1 5311059 5311997 D TIGRFAM: cell division protein FtsN; PFAM: Sporulation domain protein; KEGG: yen:YE0106 cell division protein; cell division protein FtsN 5311059..5311997 Serratia proteamaculans 568 5604977 YP_001481013.1 CDS Spro_4792 NC_009832.1 5312100 5312630 D heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 5312100..5312630 Serratia proteamaculans 568 5604985 YP_001481014.1 CDS hslU NC_009832.1 5312643 5313977 D heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 5312643..5313977 Serratia proteamaculans 568 5604986 YP_001481015.1 CDS Spro_4794 NC_009832.1 5314071 5314988 D catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate; 1,4-dihydroxy-2-naphthoate octaprenyltransferase 5314071..5314988 Serratia proteamaculans 568 5604987 YP_001481016.1 CDS Spro_4795 NC_009832.1 5315069 5315554 D regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity; ribonuclease activity regulator protein RraA 5315069..5315554 Serratia proteamaculans 568 5605190 YP_001481017.1 CDS Spro_4796 NC_009832.1 5315611 5315850 R PFAM: protein of unknown function DUF904; KEGG: yen:YE0101 hypothetical protein; hypothetical protein complement(5315611..5315850) Serratia proteamaculans 568 5605191 YP_001481018.1 CDS Spro_4797 NC_009832.1 5316390 5317235 D TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: eca:ECA4266 glycerol uptake facilitator protein; MIP family channel protein 5316390..5317235 Serratia proteamaculans 568 5605192 YP_001481019.1 CDS Spro_4798 NC_009832.1 5317279 5318787 D TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: yen:YE0099 glycerol kinase; glycerol kinase 5317279..5318787 Serratia proteamaculans 568 5605196 YP_001481020.1 CDS glpX NC_009832.1 5318918 5319928 D type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II 5318918..5319928 Serratia proteamaculans 568 5605197 YP_001481021.1 CDS emrD NC_009832.1 5319961 5321145 R multidrug efflux protein involved in adaptation to low energy shock; multidrug resistance protein D complement(5319961..5321145) Serratia proteamaculans 568 5605198 YP_001481022.1 CDS Spro_4801 NC_009832.1 5321442 5322065 D KEGG: ppr:PBPRA0239 hypothetical protein; putative transcriptional regulator 5321442..5322065 Serratia proteamaculans 568 5605423 YP_001481023.1 CDS Spro_4802 NC_009832.1 5322069 5322815 D PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: yen:YE0096 ferredoxin--NADP reductase; ferredoxin-NADP reductase 5322069..5322815 Serratia proteamaculans 568 5605424 YP_001481024.1 CDS Spro_4803 NC_009832.1 5322825 5323250 R PFAM: protein of unknown function DUF805; KEGG: yen:YE0095 hypothetical protein; hypothetical protein complement(5322825..5323250) Serratia proteamaculans 568 5605425 YP_001481025.1 CDS Spro_4804 NC_009832.1 5323437 5324042 D PFAM: protein of unknown function DUF1454; KEGG: yen:YE0094 hypothetical protein; hypothetical protein 5323437..5324042 Serratia proteamaculans 568 5605475 YP_001481026.1 CDS tpiA NC_009832.1 5324170 5324937 D Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 5324170..5324937 Serratia proteamaculans 568 5605476 YP_001481027.1 CDS Spro_4806 NC_009832.1 5325003 5325998 R TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: ypi:YpsIP31758_0090 sulfate ABC transporter, sulfate-binding protein; sulfate transporter subunit complement(5325003..5325998) Serratia proteamaculans 568 5605477 YP_001481028.1 CDS Spro_4807 NC_009832.1 5326185 5327147 R KEGG: stm:STM4062 6-phosphofructokinase I; TIGRFAM: 6-phosphofructokinase; PFAM: phosphofructokinase; 6-phosphofructokinase complement(5326185..5327147) Serratia proteamaculans 568 5605581 YP_001481029.1 CDS fieF NC_009832.1 5327379 5328281 R member of cation diffusion facilitator family; CDF; membrane-bound; induced by both zinc and iron, but does not induce resistance to zinc; can transport zinc(II) in a proton-dependent manner; instead this protein induces iron resistance; forms dimers; ferrous iron efflux protein F complement(5327379..5328281) Serratia proteamaculans 568 5605582 YP_001481030.1 CDS Spro_4809 NC_009832.1 5328449 5328892 R KEGG: stm:STM4060 periplasmic repressor of cpx regulon by interaction with CpxA, rescue from transitory stresses; periplasmic repressor of cpx regulon by interaction with CpxA, rescue from transitory stresses complement(5328449..5328892) Serratia proteamaculans 568 5605583 YP_001481031.1 CDS Spro_4810 NC_009832.1 5329042 5329740 D response regulator in two-component regulatory system with CpxA; part of the envelope stress response system; DNA-binding transcriptional regulator CpxR 5329042..5329740 Serratia proteamaculans 568 5605611 YP_001481032.1 CDS cpxA NC_009832.1 5329737 5331110 D part of two-component CpxA/CpxR system; senses envelope stress; upregulates a number of periplasmic folding and trafficking factors; two-component sensor protein 5329737..5331110 Serratia proteamaculans 568 5605612 YP_001481033.1 CDS Spro_4812 NC_009832.1 5331174 5331647 D member of the SPOUT superfamily of RNA methyltransferases; no methyltransferase activity observed with certain tRNA substrates; putative tRNA/rRNA methyltransferase YibK 5331174..5331647 Serratia proteamaculans 568 5605613 YP_001481034.1 CDS Spro_4813 NC_009832.1 5331799 5332470 D KEGG: yen:YE3598 hypothetical protein; hypothetical protein 5331799..5332470 Serratia proteamaculans 568 5605824 YP_001481035.1 CDS cysE NC_009832.1 5332534 5333355 R catalyzes the O-acetylation of serine; serine acetyltransferase complement(5332534..5333355) Serratia proteamaculans 568 5605825 YP_001481036.1 CDS gpsA NC_009832.1 5333462 5334481 R catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase complement(5333462..5334481) Serratia proteamaculans 568 5605826 YP_001481037.1 CDS Spro_4816 NC_009832.1 5334481 5334951 R molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB complement(5334481..5334951) Serratia proteamaculans 568 5605961 YP_001481038.1 CDS Spro_4817 NC_009832.1 5335011 5335259 R TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin; KEGG: yen:YE0079 glutaredoxin; glutaredoxin 3 complement(5335011..5335259) Serratia proteamaculans 568 5605962 YP_001481039.1 CDS Spro_4818 NC_009832.1 5335288 5335722 R PFAM: Rhodanese domain protein; KEGG: yen:YE0078 hypothetical protein; rhodanese domain-containing protein complement(5335288..5335722) Serratia proteamaculans 568 5605963 YP_001481040.1 CDS Spro_4819 NC_009832.1 5336022 5337566 D catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase 5336022..5337566 Serratia proteamaculans 568 5605803 YP_001481041.2 CDS Spro_4820 NC_009832.1 5337576 5338910 D PFAM: peptidase M23B; KEGG: ypi:YpsIP31758_0074 peptidase, M23 family domain protein; hypothetical protein 5337576..5338910 Serratia proteamaculans 568 5605804 YP_001481042.1 CDS Spro_4821 NC_009832.1 5338913 5339869 D PFAM: protein of unknown function DUF610 YibQ; KEGG: yen:YE0075 hypothetical protein; hypothetical protein 5338913..5339869 Serratia proteamaculans 568 5605805 YP_001481043.1 CDS Spro_4822 NC_009832.1 5340226 5342511 D PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: sdy:SDY_4094 biodegradative arginine decarboxylase; lysine decarboxylase 5340226..5342511 Serratia proteamaculans 568 5606065 YP_001481044.1 CDS tdh NC_009832.1 5342615 5343640 R converts threonine and NAD to 1,2-amino-3-oxobutanoate and NADH; functions in threonine catabolism; L-threonine 3-dehydrogenase complement(5342615..5343640) Serratia proteamaculans 568 5606066 YP_001481045.1 CDS Spro_4824 NC_009832.1 5343650 5344846 R catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine; 2-amino-3-ketobutyrate coenzyme A ligase complement(5343650..5344846) Serratia proteamaculans 568 5606067 YP_001481046.1 CDS rfaD NC_009832.1 5345087 5346016 D catalyzes the interconversion between ADP-D-glycero-beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose; ADP-L-glycero-D-mannoheptose-6-epimerase 5345087..5346016 Serratia proteamaculans 568 5606103 YP_001481047.1 CDS Spro_4826 NC_009832.1 5346040 5347086 D catalyzes the transfer of the second heptose to the heptosyl-KDO2 moiety of the lipopolysaccharide inner core; ADP-heptose:LPS heptosyltransferase II 5346040..5347086 Serratia proteamaculans 568 5606104 YP_001481048.1 CDS Spro_4827 NC_009832.1 5347089 5348060 D TIGRFAM: lipopolysaccharide heptosyltransferase I; PFAM: glycosyl transferase family 9; KEGG: ypi:YpsIP31758_0068 lipopolysaccharide heptosyltransferase I; ADP-heptose:LPS heptosyl transferase I 5347089..5348060 Serratia proteamaculans 568 5606105 YP_001481049.1 CDS Spro_4828 NC_009832.1 5348060 5348962 D KEGG: sgl:SG2197 putative lipopolysaccharide glycosyltransferase; putative lipopolysaccharide glycosyltransferase 5348060..5348962 Serratia proteamaculans 568 5606816 YP_001481050.1 CDS Spro_4829 NC_009832.1 5348946 5350115 D PFAM: O-antigen polymerase; KEGG: sgl:SG0240 putative lipid A core surface polymer ligase; O-antigen polymerase 5348946..5350115 Serratia proteamaculans 568 5606817 YP_001481051.1 CDS Spro_4830 NC_009832.1 5350180 5351271 R PFAM: glycosyl transferase family 9; KEGG: sfu:Sfum_0372 glycosyl transferase, family 9; glycosyl transferase family protein complement(5350180..5351271) Serratia proteamaculans 568 5606818 YP_001481052.1 CDS Spro_4831 NC_009832.1 5351273 5352229 R KEGG: plu:plu4850 WalW protein; WalW protein complement(5351273..5352229) Serratia proteamaculans 568 5603467 YP_001481053.1 CDS Spro_4832 NC_009832.1 5352442 5353524 D TIGRFAM: lipopolysaccharide heptosyltransferase III, putative; PFAM: glycosyl transferase family 9; KEGG: plu:plu4853 lipopolysaccharide core biosynthesis glycosyl transferase RfaQ; lipopolysaccharide heptosyltransferase III 5352442..5353524 Serratia proteamaculans 568 5603468 YP_001481054.1 CDS Spro_4833 NC_009832.1 5353521 5354648 D PFAM: glycosyl transferase group 1; KEGG: kpn:KPN_03969 glucuronic acid transferase; group 1 glycosyl transferase 5353521..5354648 Serratia proteamaculans 568 5603469 YP_001481055.1 CDS Spro_4834 NC_009832.1 5354651 5355748 D PFAM: glycosyl transferase group 1; KEGG: sgl:SG2200 putative lipopolysaccharide glycosyltransferase; group 1 glycosyl transferase 5354651..5355748 Serratia proteamaculans 568 5602594 YP_001481056.1 CDS Spro_4835 NC_009832.1 5355780 5356793 R PFAM: glycosyl transferase family 9; KEGG: dar:Daro_0162 glycosyl transferase, family 9; glycosyl transferase family protein complement(5355780..5356793) Serratia proteamaculans 568 5602595 YP_001481057.1 CDS Spro_4836 NC_009832.1 5356919 5358196 D catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A; 3-deoxy-D-manno-octulosonic-acid transferase 5356919..5358196 Serratia proteamaculans 568 5602596 YP_001481058.1 CDS Spro_4837 NC_009832.1 5358197 5358970 D PFAM: glycosyl transferase family 2; KEGG: yen:YE0068 lipopolysaccharide core biosynthesis glycosyl transferase; glycosyl transferase family protein 5358197..5358970 Serratia proteamaculans 568 5607068 YP_001481059.1 CDS coaD NC_009832.1 5358974 5359459 D Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 5358974..5359459 Serratia proteamaculans 568 5607069 YP_001481060.1 CDS Spro_4839 NC_009832.1 5359460 5360269 R Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase complement(5359460..5360269) Serratia proteamaculans 568 5607070 YP_001481061.1 CDS rpmG NC_009832.1 5360349 5360516 R in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 complement(5360349..5360516) Serratia proteamaculans 568 5603508 YP_001481062.1 CDS rpmB NC_009832.1 5360528 5360764 R required for 70S ribosome assembly; 50S ribosomal protein L28 complement(5360528..5360764) Serratia proteamaculans 568 5603509 YP_001481063.1 CDS radC NC_009832.1 5361028 5361711 R Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC complement(5361028..5361711) Serratia proteamaculans 568 5603510 YP_001481064.1 CDS Spro_4843 NC_009832.1 5361892 5363109 D catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 5361892..5363109 Serratia proteamaculans 568 5602655 YP_001481065.1 CDS dut NC_009832.1 5363087 5363545 D catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase 5363087..5363545 Serratia proteamaculans 568 5602656 YP_001481066.1 CDS slmA NC_009832.1 5363801 5364397 D FtsZ binding protein; synthetically lethal with a defect in the Min system; this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly; nucleoid occlusion protein 5363801..5364397 Serratia proteamaculans 568 5602657 YP_001481067.1 CDS pyrE NC_009832.1 5364446 5365087 R involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase complement(5364446..5365087) Serratia proteamaculans 568 5603685 YP_001481068.1 CDS rph NC_009832.1 5365179 5365895 R RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH complement(5365179..5365895) Serratia proteamaculans 568 5603686 YP_001481069.1 CDS Spro_4848 NC_009832.1 5366022 5366885 D PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: yen:YE0057 hypothetical protein; hypothetical protein 5366022..5366885 Serratia proteamaculans 568 5603687 YP_001481070.1 CDS Spro_4849 NC_009832.1 5367158 5369569 R PFAM: Pyrrolo-quinoline quinone; KEGG: psb:Psyr_3930 quinoprotein; Pyrrolo-quinoline quinone complement(5367158..5369569) Serratia proteamaculans 568 5603669 YP_001481071.1 CDS Spro_4850 NC_009832.1 5369566 5370468 R PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: sen:SACE_4169 esterase/lipase; alpha/beta hydrolase domain-containing protein complement(5369566..5370468) Serratia proteamaculans 568 5603670 YP_001481072.1 CDS Spro_4851 NC_009832.1 5370540 5371169 D PFAM: regulatory protein TetR; KEGG: fal:FRAAL5169 putative TetR-family transcriptional regulator; TetR family transcriptional regulator 5370540..5371169 Serratia proteamaculans 568 5603671 YP_001481073.1 CDS Spro_4852 NC_009832.1 5371371 5372618 D TIGRFAM: integral membrane protein, PqiA family; PFAM: Paraquat-inducible protein A; KEGG: ypi:YpsIP31758_2550 paraquat-inducible protein A; PqiA family integral membrane protein 5371371..5372618 Serratia proteamaculans 568 5603166 YP_001481074.1 CDS Spro_4853 NC_009832.1 5372602 5374245 D PFAM: Mammalian cell entry related domain protein; KEGG: yen:YE1574 putative paraquat-inducible protein B; paraquat-inducible protein B 5372602..5374245 Serratia proteamaculans 568 5603167 YP_001481075.1 CDS Spro_4854 NC_009832.1 5374242 5374790 D PFAM: protein of unknown function DUF330; KEGG: yen:YE1575 putative lipoprotein protein; hypothetical protein 5374242..5374790 Serratia proteamaculans 568 5603168 YP_001481076.1 CDS Spro_4855 NC_009832.1 5375366 5377165 D PFAM: Strictosidine synthase; SMP-30/Gluconolaconase/LRE domain protein; KEGG: mgi:Mflv_4863 strictosidine synthase; strictosidine synthase 5375366..5377165 Serratia proteamaculans 568 5604194 YP_001481077.1 CDS Spro_4856 NC_009832.1 5377288 5378301 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: yen:YE3797 probable LysR-family transcriptional regulatory protein; LysR family transcriptional regulator 5377288..5378301 Serratia proteamaculans 568 5604195 YP_001481078.1 CDS Spro_4857 NC_009832.1 5378488 5379666 R KEGG: mmr:Mmar10_2665 acetyl-CoA acetyltransferases; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase complement(5378488..5379666) Serratia proteamaculans 568 5604196 YP_001481079.1 CDS Spro_4858 NC_009832.1 5379676 5380566 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_C7556 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(5379676..5380566) Serratia proteamaculans 568 5604032 YP_001481080.1 CDS Spro_4859 NC_009832.1 5380578 5382116 R PFAM: AMP-dependent synthetase and ligase; KEGG: reh:H16_A2076 long-chain-fatty-acid--CoA ligase; AMP-dependent synthetase and ligase complement(5380578..5382116) Serratia proteamaculans 568 5604033 YP_001481081.1 CDS Spro_4860 NC_009832.1 5382552 5382950 R hypothetical protein complement(5382552..5382950) Serratia proteamaculans 568 5604034 YP_001481082.1 CDS Spro_4861 NC_009832.1 5383318 5384502 D TIGRFAM: nucleoside transporter; PFAM: Na+ dependent nucleoside transporter; nucleoside recognition domain protein; Na+ dependent nucleoside transporter domain protein; KEGG: yen:YE0051 nucleoside permease; nucleoside transporter 5383318..5384502 Serratia proteamaculans 568 5604439 YP_001481083.1 CDS Spro_4862 NC_009832.1 5384540 5384974 R KEGG: yen:YE0050 hypothetical protein; hypothetical protein complement(5384540..5384974) Serratia proteamaculans 568 5604440 YP_001481084.1 CDS Spro_4863 NC_009832.1 5385257 5385874 D PFAM: protein of unknown function UPF0126; KEGG: ypi:YpsIP31758_0043 hypothetical protein; hypothetical protein 5385257..5385874 Serratia proteamaculans 568 5604441 YP_001481085.1 CDS Spro_4864 NC_009832.1 5385882 5386775 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfl:PFL_2915 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(5385882..5386775) Serratia proteamaculans 568 5604607 YP_001481086.1 CDS Spro_4865 NC_009832.1 5386892 5388463 D PFAM: major facilitator superfamily MFS_1; KEGG: pfl:PFL_2916 major facilitator family transporter; major facilitator transporter 5386892..5388463 Serratia proteamaculans 568 5604608 YP_001481087.1 CDS gmk NC_009832.1 5390448 5391071 D Essential for recycling GMP and indirectly, cGMP; guanylate kinase 5390448..5391071 Serratia proteamaculans 568 5602854 YP_001481088.1 CDS rpoZ NC_009832.1 5391126 5391401 D promotes RNA polymerase assembly or stability; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 5391126..5391401 Serratia proteamaculans 568 5604693 YP_001481089.1 CDS Spro_4869 NC_009832.1 5391421 5393532 D KEGG: yen:YE0045 guanosine-3',5'-bisbis(diphosphate) 3'-pyrophosphydrolase; TIGRFAM: RelA/SpoT family protein; PFAM: TGS domain protein; metal-dependent phosphohydrolase HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase HD region; bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase 5391421..5393532 Serratia proteamaculans 568 5604694 YP_001481090.1 CDS Spro_4870 NC_009832.1 5393538 5394233 D specifically modifies tRNA at position G18; tRNA guanosine-2'-O-methyltransferase 5393538..5394233 Serratia proteamaculans 568 5604695 YP_001481091.1 CDS Spro_4871 NC_009832.1 5394230 5396311 D catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 5394230..5396311 Serratia proteamaculans 568 5604918 YP_001481092.1 CDS Spro_4872 NC_009832.1 5396371 5397582 R PFAM: sodium/glutamate symporter; KEGG: ypi:YpsIP31758_0036 sodium/glutamate symporter; sodium/glutamate symporter complement(5396371..5397582) Serratia proteamaculans 568 5604919 YP_001481093.1 CDS Spro_4873 NC_009832.1 5397825 5399225 D TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: ypi:YpsIP31758_0034 xanthine permease; uracil-xanthine permease 5397825..5399225 Serratia proteamaculans 568 5604920 YP_001481094.1 CDS Spro_4874 NC_009832.1 5399356 5401017 D PFAM: AsmA family protein; KEGG: yen:YE0040 possible exported protein; AsmA family protein 5399356..5401017 Serratia proteamaculans 568 5603014 YP_001481095.1 CDS Spro_4875 NC_009832.1 5401368 5403311 D PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; Carbohydrate-binding family V/XII; KEGG: mxa:MXAN_1967 putative peptidase, S8 (subtilisin) family; carbohydrate-binding family V/XII protein 5401368..5403311 Serratia proteamaculans 568 5603015 YP_001481096.1 CDS Spro_4876 NC_009832.1 5403390 5404334 R TIGRFAM: thioesterase domain, putative; PFAM: GCN5-related N-acetyltransferase; Thioesterase putative; KEGG: ypi:YpsIP31758_0032 acetyltransferase, GNAT family/thioesterase domain; thioesterase domain-containing protein complement(5403390..5404334) Serratia proteamaculans 568 5603016 YP_001481097.1 CDS Spro_4877 NC_009832.1 5404358 5404795 R hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase complement(5404358..5404795) Serratia proteamaculans 568 5602848 YP_001481098.1 CDS rbn NC_009832.1 5404792 5405682 R RNase BN; required for 3' maturation of certain phage T4-encoded tRNAs; forms a dimer; specific for immature tRNA substrates containing incorrect residues within the universal CCA sequence; 3' to 5' exoribonuclease; ribonuclease BN complement(5404792..5405682) Serratia proteamaculans 568 5602849 YP_001481099.1 CDS Spro_4879 NC_009832.1 5405732 5406322 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: yen:YE0030 hypothetical protein; phosphatase complement(5405732..5406322) Serratia proteamaculans 568 5602850 YP_001481100.1 CDS Spro_4880 NC_009832.1 5406487 5408310 R TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: eca:ECA0030 GTP-binding regulatory protein; GTP-binding protein TypA complement(5406487..5408310) Serratia proteamaculans 568 5602598 YP_001481101.1 CDS glnA NC_009832.1 5408681 5410090 D forms a homododecamer; forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate; also functions in the assimilation of ammonia; highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues; addition of adenylyl groups results in inactivation of the enzyme; glutamine synthetase 5408681..5410090 Serratia proteamaculans 568 5602599 YP_001481102.1 CDS glnL NC_009832.1 5410275 5411324 D sensory histidine kinase in two-component regulatory system with GlnG; acts as a signal transducer which responds to the nitrogen level of cell and modulates the activity of ntrC by phosphorylation/dephosphorylation; nitrogen regulation protein NR(II) 5410275..5411324 Serratia proteamaculans 568 5602600 YP_001481103.1 CDS glnG NC_009832.1 5411333 5412745 D response regulator of a two-component regulatory system involved in the activation of nitrogen assimilation genes; interacts with sigma-54; nitrogen regulation protein NR(I) 5411333..5412745 Serratia proteamaculans 568 5602549 YP_001481104.1 CDS Spro_4884 NC_009832.1 5413029 5414402 R catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase complement(5413029..5414402) Serratia proteamaculans 568 5602550 YP_001481105.1 CDS Spro_4885 NC_009832.1 5414585 5415136 R PFAM: protein of unknown function DUF414; KEGG: yen:YE0023 hypothetical protein; hypothetical protein complement(5414585..5415136) Serratia proteamaculans 568 5602551 YP_001481106.1 CDS engB NC_009832.1 5415885 5416535 D binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 5415885..5416535 Serratia proteamaculans 568 5602731 YP_001481107.1 CDS Spro_4887 NC_009832.1 5417070 5419874 R has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I complement(5417070..5419874) Serratia proteamaculans 568 5602732 YP_001481108.1 CDS Spro_4888 NC_009832.1 5420379 5421269 D PFAM: phospholipid/glycerol acyltransferase; KEGG: kpn:KPN_04171 putative endonuclease; putative acyltransferase 5420379..5421269 Serratia proteamaculans 568 5602733 YP_001481109.1 CDS Spro_4889 NC_009832.1 5421314 5421937 R PFAM: DSBA oxidoreductase; KEGG: yen:YE0020 secreted thiol:disulfide interchange protein DsbA; periplasmic protein disulfide isomerase I complement(5421314..5421937) Serratia proteamaculans 568 5602664 YP_001481110.1 CDS Spro_4890 NC_009832.1 5421967 5422953 R catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro; specific substrate in vivo has not been identified yet; plays a role in long-term cell survival and expression of surface appendages; serine/threonine protein kinase complement(5421967..5422953) Serratia proteamaculans 568 5602665 YP_001481111.1 CDS Spro_4891 NC_009832.1 5423058 5423327 R PFAM: protein of unknown function DUF1040; KEGG: yen:YE0018 hypothetical protein; hypothetical protein complement(5423058..5423327) Serratia proteamaculans 568 5602666 YP_001481112.1 CDS mobA NC_009832.1 5423480 5424073 D in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis; molybdopterin-guanine dinucleotide biosynthesis protein MobA 5423480..5424073 Serratia proteamaculans 568 5604315 YP_001481113.1 CDS Spro_4893 NC_009832.1 5424066 5424584 D in Escherichia coli the MobB protein is not essential but has been found to interact with multiple proteins involved in the molybdopterin guanine dinucleotide cofactor biosynthesis pathway; molybdopterin-guanine dinucleotide biosynthesis protein B 5424066..5424584 Serratia proteamaculans 568 5604316 YP_001481114.1 CDS Spro_4894 NC_009832.1 5430299 5430988 D PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: yen:YE0014 putative GntR-family transcriptional regulator; GntR domain-containing protein 5430299..5430988 Serratia proteamaculans 568 5605997 YP_001481115.1 CDS Spro_4895 NC_009832.1 5431051 5432466 D TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: yps:YPTB0010 MFS multidrug:H+ antiporter; EmrB/QacA family drug resistance transporter 5431051..5432466 Serratia proteamaculans 568 5603735 YP_001481116.1 CDS Spro_4896 NC_009832.1 5432463 5433464 R DNA-binding transcriptional repressor of ribose metabolism; transcriptional repressor RbsR complement(5432463..5433464) Serratia proteamaculans 568 5603736 YP_001481117.1 CDS Spro_4897 NC_009832.1 5433470 5434426 R catalyzes the formation of D-ribose 5-phosphate from ribose; ribokinase complement(5433470..5434426) Serratia proteamaculans 568 5603737 YP_001481118.1 CDS Spro_4898 NC_009832.1 5434464 5435354 R periplasmic substrate-binding component of the ATP-dependent ribose transport system; D-ribose transporter subunit RbsB complement(5434464..5435354) Serratia proteamaculans 568 5603464 YP_001481119.1 CDS rbsC NC_009832.1 5435376 5436341 R functions to transport ribose at high affinity; forms a complex with RbsA2C2B; ribose ABC transporter permease complement(5435376..5436341) Serratia proteamaculans 568 5603465 YP_001481120.1 CDS Spro_4900 NC_009832.1 5436348 5437853 R with RbsBCD acts to import ribose into the cell; RbsA contains 2 ATP-binding domain; D-ribose transporter ATP binding protein complement(5436348..5437853) Serratia proteamaculans 568 5603466 YP_001481121.1 CDS Spro_4901 NC_009832.1 5437861 5438280 R cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose; RbsD is required for efficient ribose utilization in E. coli; rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source; D-ribose pyranase complement(5437861..5438280) Serratia proteamaculans 568 5603308 YP_001481122.1 CDS trkD NC_009832.1 5438471 5440339 R Responsible for the low-affinity transport of potassium into the cell; involved in potassium ion uptake under hyper-osmotic stress at a low pH; potassium transport protein Kup complement(5438471..5440339) Serratia proteamaculans 568 5603309 YP_001481123.1 CDS Spro_4903 NC_009832.1 5440560 5442131 D interacts with LdcI, lysine decarboxylase; may be active in late log/ early stationary phase; regulatory ATPase RavA 5440560..5442131 Serratia proteamaculans 568 5603310 YP_001481124.1 CDS yieM NC_009832.1 5442134 5443597 D contains a von Willibrand factor type A domain; stimulates the ATPase activity of RavA; hypothetical protein 5442134..5443597 Serratia proteamaculans 568 5603666 YP_001481125.1 CDS Spro_4905 NC_009832.1 5443601 5444593 R catalyzes the formation of asparagine from aspartate and ammonia; asparagine synthetase AsnA complement(5443601..5444593) Serratia proteamaculans 568 5603667 YP_001481126.1 CDS Spro_4906 NC_009832.1 5444749 5445210 D transcriptional repressor of asnA which codes for aspartate-ammonia ligase; DNA-binding transcriptional regulator AsnC 5444749..5445210 Serratia proteamaculans 568 5603668 YP_001481127.1 CDS Spro_4907 NC_009832.1 5445308 5445748 D An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin 5445308..5445748 Serratia proteamaculans 568 5603163 YP_001481128.1 CDS Spro_4908 NC_009832.1 5446130 5448019 D GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 5446130..5448019 Serratia proteamaculans 568 5603164 YP_001481129.1 CDS gidB NC_009832.1 5448157 5448777 D glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB 5448157..5448777 Serratia proteamaculans 568 5603165 Spro_R0001 tRNA Spro_R0001 NC_009832.1 116207 116297 D tRNA-Sec 116207..116297 Serratia proteamaculans 568 5606447 Spro_R0002 tRNA Spro_R0002 NC_009832.1 144755 144831 D tRNA-Pro 144755..144831 Serratia proteamaculans 568 5606406 Spro_R0003 tRNA Spro_R0003 NC_009832.1 196987 197063 D tRNA-Arg 196987..197063 Serratia proteamaculans 568 5605356 Spro_R0004 tRNA Spro_R0004 NC_009832.1 197123 197198 D tRNA-His 197123..197198 Serratia proteamaculans 568 5606451 Spro_R0005 tRNA Spro_R0005 NC_009832.1 197242 197328 D tRNA-Leu 197242..197328 Serratia proteamaculans 568 5605625 Spro_R0006 tRNA Spro_R0006 NC_009832.1 197405 197481 D tRNA-Pro 197405..197481 Serratia proteamaculans 568 5605453 Spro_R0008 tRNA Spro_R0008 NC_009832.1 300248 300323 D tRNA-Glu 300248..300323 Serratia proteamaculans 568 5603188 Spro_R0011 tRNA Spro_R0011 NC_009832.1 307568 307643 D tRNA-Thr 307568..307643 Serratia proteamaculans 568 5606920 Spro_R0012 tRNA Spro_R0012 NC_009832.1 307668 307752 D tRNA-Tyr 307668..307752 Serratia proteamaculans 568 5606358 Spro_R0013 tRNA Spro_R0013 NC_009832.1 307952 308026 D tRNA-Gly 307952..308026 Serratia proteamaculans 568 5606359 Spro_R0014 tRNA Spro_R0014 NC_009832.1 308033 308108 D tRNA-Thr 308033..308108 Serratia proteamaculans 568 5606325 Spro_R0016 tRNA Spro_R0016 NC_009832.1 338141 338217 D tRNA-Ile 338141..338217 Serratia proteamaculans 568 5606372 Spro_R0017 tRNA Spro_R0017 NC_009832.1 338255 338330 D tRNA-Ala 338255..338330 Serratia proteamaculans 568 5606373 Spro_R0020 tRNA Spro_R0020 NC_009832.1 355873 355948 R tRNA-Phe complement(355873..355948) Serratia proteamaculans 568 5607247 Spro_R0021 tRNA Spro_R0021 NC_009832.1 451284 451359 R tRNA-Phe complement(451284..451359) Serratia proteamaculans 568 5602766 Spro_R0022 tRNA Spro_R0022 NC_009832.1 474644 474719 D tRNA-Gly 474644..474719 Serratia proteamaculans 568 5602466 Spro_R0023 tRNA Spro_R0023 NC_009832.1 474784 474859 D tRNA-Gly 474784..474859 Serratia proteamaculans 568 5606592 Spro_R0024 tRNA Spro_R0024 NC_009832.1 474915 474990 D tRNA-Gly 474915..474990 Serratia proteamaculans 568 5606751 Spro_R0025 tRNA Spro_R0025 NC_009832.1 537028 537114 D tRNA-Leu 537028..537114 Serratia proteamaculans 568 5603836 Spro_R0026 tRNA Spro_R0026 NC_009832.1 537175 537251 D tRNA-Met 537175..537251 Serratia proteamaculans 568 5606131 Spro_R0027 tRNA Spro_R0027 NC_009832.1 627171 627255 D tRNA-Leu 627171..627255 Serratia proteamaculans 568 5606681 Spro_R0028 tRNA Spro_R0028 NC_009832.1 711848 711934 R tRNA-Leu complement(711848..711934) Serratia proteamaculans 568 5605814 Spro_R0029 tRNA Spro_R0029 NC_009832.1 711978 712064 R tRNA-Leu complement(711978..712064) Serratia proteamaculans 568 5607205 Spro_R0030 tRNA Spro_R0030 NC_009832.1 712099 712185 R tRNA-Leu complement(712099..712185) Serratia proteamaculans 568 5606529 Spro_R0031 tRNA Spro_R0031 NC_009832.1 942212 942304 D tRNA-Ser 942212..942304 Serratia proteamaculans 568 5602659 Spro_R0032 tRNA Spro_R0032 NC_009832.1 942308 942384 D tRNA-Arg 942308..942384 Serratia proteamaculans 568 5606723 Spro_R0033 tRNA Spro_R0033 NC_009832.1 942446 942522 D tRNA-Arg 942446..942522 Serratia proteamaculans 568 5606724 Spro_R0034 tRNA Spro_R0034 NC_009832.1 942573 942649 D tRNA-Arg 942573..942649 Serratia proteamaculans 568 5604981 Spro_R0036 tRNA Spro_R0036 NC_009832.1 985129 985204 D tRNA-Glu 985129..985204 Serratia proteamaculans 568 5607379 Spro_R0039 tRNA Spro_R0039 NC_009832.1 988658 988734 D tRNA-Asp 988658..988734 Serratia proteamaculans 568 5605647 Spro_R0040 tRNA Spro_R0040 NC_009832.1 1011798 1011874 D tRNA-Asp 1011798..1011874 Serratia proteamaculans 568 5603972 Spro_R0042 tRNA Spro_R0042 NC_009832.1 1286581 1286657 D tRNA-Arg 1286581..1286657 Serratia proteamaculans 568 5602727 Spro_R0043 tRNA Spro_R0043 NC_009832.1 1339316 1339390 R tRNA-Gln complement(1339316..1339390) Serratia proteamaculans 568 5603505 Spro_R0044 tRNA Spro_R0044 NC_009832.1 1339410 1339486 R tRNA-Met complement(1339410..1339486) Serratia proteamaculans 568 5606746 Spro_R0045 tRNA Spro_R0045 NC_009832.1 1339525 1339599 R tRNA-Gln complement(1339525..1339599) Serratia proteamaculans 568 5606747 Spro_R0046 tRNA Spro_R0046 NC_009832.1 1339647 1339721 R tRNA-Gln complement(1339647..1339721) Serratia proteamaculans 568 5604580 Spro_R0047 tRNA Spro_R0047 NC_009832.1 1339751 1339835 R tRNA-Leu complement(1339751..1339835) Serratia proteamaculans 568 5607141 Spro_R0048 tRNA Spro_R0048 NC_009832.1 1339846 1339922 R tRNA-Met complement(1339846..1339922) Serratia proteamaculans 568 5607142 Spro_R0049 tRNA Spro_R0049 NC_009832.1 1408541 1408616 D tRNA-Lys 1408541..1408616 Serratia proteamaculans 568 5604801 Spro_R0050 tRNA Spro_R0050 NC_009832.1 1408649 1408724 D tRNA-Val 1408649..1408724 Serratia proteamaculans 568 5606547 Spro_R0051 tRNA Spro_R0051 NC_009832.1 1408732 1408807 D tRNA-Lys 1408732..1408807 Serratia proteamaculans 568 5606548 Spro_R0052 tRNA Spro_R0052 NC_009832.1 1408878 1408953 D tRNA-Lys 1408878..1408953 Serratia proteamaculans 568 5606016 Spro_R0053 tRNA Spro_R0053 NC_009832.1 1409007 1409082 D tRNA-Lys 1409007..1409082 Serratia proteamaculans 568 5605366 Spro_R0054 tRNA Spro_R0054 NC_009832.1 1946172 1946259 D tRNA-Ser 1946172..1946259 Serratia proteamaculans 568 5604958 Spro_R0055 tRNA Spro_R0055 NC_009832.1 2034897 2034972 D tRNA-Gly 2034897..2034972 Serratia proteamaculans 568 5605875 Spro_R0056 tRNA Spro_R0056 NC_009832.1 2035030 2035103 D tRNA-Cys 2035030..2035103 Serratia proteamaculans 568 5606271 Spro_R0057 tRNA Spro_R0057 NC_009832.1 2035114 2035199 D tRNA-Leu 2035114..2035199 Serratia proteamaculans 568 5605781 Spro_R0058 tRNA Spro_R0058 NC_009832.1 2050388 2050482 D tRNA-OTHER 2050388..2050482 Serratia proteamaculans 568 5606091 Spro_R0059 tRNA Spro_R0059 NC_009832.1 2115712 2115801 R tRNA-Ser complement(2115712..2115801) Serratia proteamaculans 568 5606696 Spro_R0060 tRNA Spro_R0060 NC_009832.1 2116023 2116112 R tRNA-Ser complement(2116023..2116112) Serratia proteamaculans 568 5605558 Spro_R0061 tRNA Spro_R0061 NC_009832.1 2390331 2390407 R tRNA-Val complement(2390331..2390407) Serratia proteamaculans 568 5605696 Spro_R0062 tRNA Spro_R0062 NC_009832.1 2390429 2390505 R tRNA-Val complement(2390429..2390505) Serratia proteamaculans 568 5605739 Spro_R0063 tRNA Spro_R0063 NC_009832.1 2390527 2390603 R tRNA-Val complement(2390527..2390603) Serratia proteamaculans 568 5605322 Spro_R0064 tRNA Spro_R0064 NC_009832.1 2990610 2990694 D tRNA-Tyr 2990610..2990694 Serratia proteamaculans 568 5606670 Spro_R0065 tRNA Spro_R0065 NC_009832.1 2990791 2990875 D tRNA-Tyr 2990791..2990875 Serratia proteamaculans 568 5603982 Spro_R0066 tRNA Spro_R0066 NC_009832.1 3421738 3421827 R tRNA-Ser complement(3421738..3421827) Serratia proteamaculans 568 5604569 Spro_R0067 tRNA Spro_R0067 NC_009832.1 3422811 3422886 D tRNA-Asn 3422811..3422886 Serratia proteamaculans 568 5604570 Spro_R0068 tRNA Spro_R0068 NC_009832.1 3447048 3447123 D tRNA-Asn 3447048..3447123 Serratia proteamaculans 568 5604847 Spro_R0069 tRNA Spro_R0069 NC_009832.1 3494641 3494716 D tRNA-Asn 3494641..3494716 Serratia proteamaculans 568 5605509 Spro_R0070 tRNA Spro_R0070 NC_009832.1 3528610 3528685 D tRNA-Asn 3528610..3528685 Serratia proteamaculans 568 5605993 Spro_R0071 tRNA Spro_R0071 NC_009832.1 3593930 3594006 D tRNA-Pro 3593930..3594006 Serratia proteamaculans 568 5606783 Spro_R0072 tRNA Spro_R0072 NC_009832.1 3594665 3594740 R tRNA-Thr complement(3594665..3594740) Serratia proteamaculans 568 5603461 Spro_R0073 tRNA Spro_R0073 NC_009832.1 3594747 3594834 R tRNA-Ser complement(3594747..3594834) Serratia proteamaculans 568 5603065 Spro_R0074 tRNA Spro_R0074 NC_009832.1 3752729 3752803 D tRNA-Arg 3752729..3752803 Serratia proteamaculans 568 5603702 Spro_R0075 tRNA Spro_R0075 NC_009832.1 3779490 3779565 R tRNA-Ala complement(3779490..3779565) Serratia proteamaculans 568 5604203 Spro_R0076 tRNA Spro_R0076 NC_009832.1 3779626 3779701 R tRNA-Ala complement(3779626..3779701) Serratia proteamaculans 568 5603129 Spro_R0077 tRNA Spro_R0077 NC_009832.1 3781664 3781739 D tRNA-Val 3781664..3781739 Serratia proteamaculans 568 5604204 Spro_R0078 tRNA Spro_R0078 NC_009832.1 3781780 3781855 D tRNA-Val 3781780..3781855 Serratia proteamaculans 568 5603085 Spro_R0079 tRNA Spro_R0079 NC_009832.1 3781895 3781970 D tRNA-Val 3781895..3781970 Serratia proteamaculans 568 5603595 Spro_R0080 tRNA Spro_R0080 NC_009832.1 3781978 3782053 D tRNA-Lys 3781978..3782053 Serratia proteamaculans 568 5602604 Spro_R0084 tRNA Spro_R0084 NC_009832.1 4147237 4147312 R tRNA-Ala complement(4147237..4147312) Serratia proteamaculans 568 5605401 Spro_R0085 tRNA Spro_R0085 NC_009832.1 4147350 4147426 R tRNA-Ile complement(4147350..4147426) Serratia proteamaculans 568 5605402 Spro_R0087 tRNA Spro_R0087 NC_009832.1 4210718 4210794 D tRNA-Met 4210718..4210794 Serratia proteamaculans 568 5606902 Spro_R0088 tRNA Spro_R0088 NC_009832.1 4210862 4210938 D tRNA-Met 4210862..4210938 Serratia proteamaculans 568 5603573 Spro_R0089 tRNA Spro_R0089 NC_009832.1 4211003 4211079 D tRNA-Met 4211003..4211079 Serratia proteamaculans 568 5602597 Spro_R0090 tRNA Spro_R0090 NC_009832.1 4307337 4307410 R tRNA-Gly complement(4307337..4307410) Serratia proteamaculans 568 5605326 Spro_R0091 tRNA Spro_R0091 NC_009832.1 4486593 4486668 D tRNA-Phe 4486593..4486668 Serratia proteamaculans 568 5606070 Spro_R0092 tRNA Spro_R0092 NC_009832.1 4769981 4770057 D tRNA-Met 4769981..4770057 Serratia proteamaculans 568 5604360 Spro_R0094 tRNA Spro_R0094 NC_009832.1 4993782 4993857 R tRNA-Thr complement(4993782..4993857) Serratia proteamaculans 568 5606218 Spro_R0097 tRNA Spro_R0097 NC_009832.1 4997229 4997304 R tRNA-Glu complement(4997229..4997304) Serratia proteamaculans 568 5603119 Spro_R0099 tRNA Spro_R0099 NC_009832.1 5276550 5276625 R tRNA-Trp complement(5276550..5276625) Serratia proteamaculans 568 5604605 Spro_R0100 tRNA Spro_R0100 NC_009832.1 5276679 5276755 R tRNA-Asp complement(5276679..5276755) Serratia proteamaculans 568 5607176 Spro_R0103 tRNA Spro_R0103 NC_009832.1 5280167 5280242 R tRNA-Ala complement(5280167..5280242) Serratia proteamaculans 568 5602962 Spro_R0104 tRNA Spro_R0104 NC_009832.1 5280367 5280443 R tRNA-Ile complement(5280367..5280443) Serratia proteamaculans 568 5602963 Spro_R0108 tRNA Spro_R0108 NC_009832.1 5428014 5428089 R tRNA-Glu complement(5428014..5428089) Serratia proteamaculans 568 5606037 Spro_R0007 rRNA Spro_R0007 NC_009832.1 298569 300103 D 16S ribosomal RNA 298569..300103 Serratia proteamaculans 568 5606781 Spro_R0009 rRNA Spro_R0009 NC_009832.1 300559 303468 D 23S ribosomal RNA 300559..303468 Serratia proteamaculans 568 5603814 Spro_R0010 rRNA Spro_R0010 NC_009832.1 303567 303682 D 5S ribosomal RNA 303567..303682 Serratia proteamaculans 568 5603815 Spro_R0015 rRNA Spro_R0015 NC_009832.1 336532 338066 D 16S ribosomal RNA 336532..338066 Serratia proteamaculans 568 5607195 Spro_R0018 rRNA Spro_R0018 NC_009832.1 338536 341444 D 23S ribosomal RNA 338536..341444 Serratia proteamaculans 568 5605216 Spro_R0019 rRNA Spro_R0019 NC_009832.1 341546 341661 D 5S ribosomal RNA 341546..341661 Serratia proteamaculans 568 5607231 Spro_R0035 rRNA Spro_R0035 NC_009832.1 983450 984984 D 16S ribosomal RNA 983450..984984 Serratia proteamaculans 568 5603146 Spro_R0037 rRNA Spro_R0037 NC_009832.1 985440 988349 D 23S ribosomal RNA 985440..988349 Serratia proteamaculans 568 5607032 Spro_R0038 rRNA Spro_R0038 NC_009832.1 988448 988563 D 5S ribosomal RNA 988448..988563 Serratia proteamaculans 568 5605646 Spro_R0082 rRNA Spro_R0082 NC_009832.1 4143910 4144025 R 5S ribosomal RNA complement(4143910..4144025) Serratia proteamaculans 568 5603581 Spro_R0083 rRNA Spro_R0083 NC_009832.1 4144123 4147031 R 23S ribosomal RNA complement(4144123..4147031) Serratia proteamaculans 568 5603040 Spro_R0086 rRNA Spro_R0086 NC_009832.1 4147501 4149035 R 16S ribosomal RNA complement(4147501..4149035) Serratia proteamaculans 568 5602929 Spro_r01 rRNA Spro_r01 NC_009832.1 4993614 4993732 D 5S ribosomal RNA 4993614..4993732 Serratia proteamaculans 568 5696511 Spro_R0095 rRNA Spro_R0095 NC_009832.1 4993871 4993986 R 5S ribosomal RNA complement(4993871..4993986) Serratia proteamaculans 568 5602667 Spro_R0096 rRNA Spro_R0096 NC_009832.1 4994085 4996993 R 23S ribosomal RNA complement(4994085..4996993) Serratia proteamaculans 568 5603118 Spro_R0098 rRNA Spro_R0098 NC_009832.1 4997449 4998983 R 16S ribosomal RNA complement(4997449..4998983) Serratia proteamaculans 568 5602899 Spro_R0101 rRNA Spro_R0101 NC_009832.1 5276850 5276965 R 5S ribosomal RNA complement(5276850..5276965) Serratia proteamaculans 568 5607177 Spro_R0102 rRNA Spro_R0102 NC_009832.1 5277064 5279973 R 23S ribosomal RNA complement(5277064..5279973) Serratia proteamaculans 568 5602806 Spro_R0105 rRNA Spro_R0105 NC_009832.1 5280547 5282081 R 16S ribosomal RNA complement(5280547..5282081) Serratia proteamaculans 568 5602674 Spro_R0106 rRNA Spro_R0106 NC_009832.1 5424656 5424771 R 5S ribosomal RNA complement(5424656..5424771) Serratia proteamaculans 568 5604317 Spro_R0107 rRNA Spro_R0107 NC_009832.1 5424869 5427778 R 23S ribosomal RNA complement(5424869..5427778) Serratia proteamaculans 568 5602855 Spro_R0109 rRNA Spro_R0109 NC_009832.1 5428234 5429768 R 16S ribosomal RNA complement(5428234..5429768) Serratia proteamaculans 568 5606038