-- dump date 20140620_062345 -- class Genbank::CDS -- table cds_note -- id note YP_008520383.1 KEGG: CRISPR-associated protein Cas2; TIGRFAM: CRISPR-associated protein Cas2; PFAM: CRISPR-associated protein Cas2 YP_008520384.1 TIGRFAM: CRISPR-associated protein Cas1; HAMAP : CRISPR-associated protein Cas1; KEGG: CRISPR-associated protein Cas1; PFAM: CRISPR-associated protein Cas1 YP_008520385.1 TIGRFAM: CRISPR-associated protein, Cse3 family; PFAM: CRISPR-associated protein CT1974; KEGG: CRISPR-associated protein, Cse3 family; SMART: CRISPR-associated protein CT1974 YP_008520386.1 KEGG: CRISPR-associated protein Cas5 family; TIGRFAM: CRISPR-associated protein Cas5 family, CRISPR-associated protein Cas5; PFAM: CRISPR-associated protein, Cas5 YP_008520387.1 KEGG: Cse4 family CRISPR-associated protein; TIGRFAM: CRISPR-associated protein, Cse4 family; PFAM: CRISPR-associated protein CT1975 YP_008520388.1 KEGG: CRISPR-associated protein, Cse2 family; TIGRFAM: CRISPR-associated protein, Cse2 family; PFAM: CRISPR-associated protein Cse2 YP_008520389.1 KEGG: Cse1 family CRISPR-associated protein; TIGRFAM: CRISPR-associated protein, Cse1 family; PFAM: CRISPR-associated protein Cse1 YP_008520390.1 TIGRFAM: CRISPR-associated helicase Cas3, CRISPR-associated HD domain protein; PFAM: DEAD/DEAH box helicase domain protein, helicase domain-containing protein; KEGG: CRISPR-associated helicase Cas3; SMART: DEAD-like helicase YP_008520391.1 PFAM: protein of unknown function DUF583; KEGG: hypothetical protein YP_008520392.1 KEGG: PfkB domain-containing protein; PFAM: PfkB domain protein YP_008520393.1 PFAM: porin LamB type, Protein of unknown function DUF3205; KEGG: porin LamB type YP_008520395.1 TIGRFAM: PTS system, sucrose-specific IIBC subunit, PTS system, glucose-like IIB subunint, PTS system, maltose and glucose-specific subfamily, IIC subunit; KEGG: PTS system sucrose-specific transporter subunit IIBC; PFAM: phosphotransferase system EIIC, Phosphotransferase system EIIB/cysteine, phosphorylation site YP_008520396.1 TIGRFAM: sucrose-6-phosphate hydrolase; PFAM: Glycosyl hydrolase family 32 domain protein; KEGG: scrB, sucrose-6-phosphate hydrolase; SMART: glycoside hydrolase family 32 YP_008520397.1 TIGRFAM: D-fructose-responsive transcription factor; PFAM: regulatory protein LacI; KEGG: LacI family transcriptional regulator; SMART: regulatory protein LacI YP_008520398.1 KEGG: TonB system transport protein ExbD; TIGRFAM: TonB system transport protein ExbD; PFAM: Biopolymer transport protein ExbD/TolR YP_008520399.1 KEGG: tonB-system energizer ExbB; TIGRFAM: tonB-system energizer ExbB; PFAM: MotA/TolQ/ExbB proton channel YP_008520400.1 KEGG: TRAP dicarboxylate transporter subunit DctP; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7 YP_008520401.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: hypothetical protein YP_008520402.1 KEGG: TRAP dicarboxylate transporter subunit DctM; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit YP_008520403.1 TIGRFAM: cystathionine beta-lyase; KEGG: metC, cystathionine beta-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_008520404.1 PFAM: SNARE associated protein; KEGG: hypothetical protein YP_008520405.1 KEGG: yqhC, DNA-binding transcriptional regulator; PFAM: AraC-type transcriptional regulator domain protein, Helix-turn-helix, AraC domain-containing protein; SMART: Helix-turn-helix, AraC domain-containing protein YP_008520406.1 KEGG: iron-containing alcohol dehydrogenase; PFAM: iron-containing alcohol dehydrogenase YP_008520407.1 KEGG: sodium-dependent inorganic phosphate (Pi) transporter; TIGRFAM: sodium-dependent inorganic phosphate (Pi) transporter, Na/Pi-cotransporter II-related protein; PFAM: PhoU domain, Na+/Picotransporter YP_008520408.1 KEGG: 2-oxoglutarate/malate translocator; TIGRFAM: anion transporter; PFAM: sodium/sulfate symporter YP_008520409.1 SMART: Methionine synthase B12-binding module cap domain protein; TIGRFAM: methionine synthase; KEGG: metH, B12-dependent methionine synthase; PFAM: homocysteine S-methyltransferase, dihydropteroate synthase DHPS, Methionine synthase B12-binding module cap domain protein, Vitamin B12 dependent methionine synthase activation region, cobalamin B12-binding domain protein YP_008520410.1 KEGG: IclR family transcriptional regulator; PFAM: Transcriptional regulator IclR , regulatory protein IclR; SMART: regulatory protein IclR YP_008520411.1 HAMAP : Isocitrate dehydrogenase kinase/phosphatase; KEGG: bifunctional isocitrate dehydrogenase kinase/phosphatase; PFAM: Isocitrate dehydrogenase kinasephosphatase YP_008520412.1 TIGRFAM: isocitrate lyase; KEGG: aceA, isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase YP_008520413.1 TIGRFAM: malate synthase A; KEGG: malate synthase; PFAM: malate synthase YP_008520414.1 PFAM: homoserine O-succinyltransferase; TIGRFAM: homoserine O-succinyltransferase; HAMAP : Homoserine O-succinyltransferase; KEGG: Homoserine O-succinyltransferase YP_008520415.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: yrdA, hypothetical protein YP_008520416.1 TIGRFAM: shikimate 5-dehydrogenase; HAMAP : Shikimate dehydrogenase; KEGG: aroE, dehydroshikimate reductase, NAD(P)-binding protein; PFAM: Shikimate dehydrogenase substrate binding domain protein, Shikimate/quinate 5-dehydrogenase YP_008520417.1 KEGG: rimN, tRNA (ANN) t(6)A37 threonylcarbamoyladenosine biosynthesis protein; HAMAP : ribosome maturation factor rimN; PFAM: SUA5/yciO/yrdC domain-containing protein YP_008520418.1 PFAM: DNA topoisomerase type IA zn finger domain protein; KEGG: DNA topoisomerase YP_008520419.1 KEGG: hypothetical protein; HAMAP : Protein smg; PFAM: protein of unknown function DUF494 YP_008520420.1 KEGG: DNA protecting protein DprA; TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein YP_008520421.1 TIGRFAM: peptide deformylase; HAMAP : Peptide deformylase; KEGG: def, peptide deformylase; PFAM: Peptide deformylase YP_008520422.1 PFAM: formyl transferase domain protein; TIGRFAM: methionyl-tRNA formyltransferase; HAMAP : Methionyl-tRNA formyltransferase; KEGG: fmt, methionyl-tRNA formyltransferase YP_008520423.1 TIGRFAM: sun protein; HAMAP : Ribosomal RNA small subunit methyltransferase B; KEGG: rsmB, ribosomal RNA small subunit methyltransferase B; PFAM: Fmu (Sun) domain protein, NusB/RsmB/TIM44 YP_008520424.1 PFAM: TrkA-N domain protein, TrkA-C domain protein; KEGG: TrkA-N domain-containing protein YP_008520425.1 TIGRFAM: large conductance mechanosensitive channel protein; HAMAP : Large-conductance mechanosensitive channel; KEGG: mscL, Large-conductance mechanosensitive channel; PFAM: large-conductance mechanosensitive channel YP_008520426.1 PFAM: protein of unknown function DUF331; KEGG: hypothetical protein YP_008520427.1 PFAM: DnaJ-like, subfamily C, domain-containing protein; KEGG: DnaJ domain-containing protein YP_008520428.1 TIGRFAM: ribosomal protein L17; HAMAP : 50S ribosomal protein L17; KEGG: rplQ, 50S ribosomal protein L17; PFAM: ribosomal protein L17 YP_008520429.1 SMART: RNA polymerase RpoA/D/Rpb3-type; TIGRFAM: DNA-directed RNA polymerase, alpha subunit; KEGG: DNA-directed RNA polymerase subunit alpha; HAMAP : DNA-directed RNA polymerase subunit alpha; PFAM: RNA polymerase alpha subunit domain protein, RNA polymerase insert, RNA polymerase dimerization YP_008520430.1 SMART: RNA-binding S4 domain protein; TIGRFAM: ribosomal protein S4; KEGG: rpsD, 30S ribosomal protein S4; HAMAP : ribosomal protein S4; PFAM: ribosomal protein S4, RNA-binding S4 domain protein YP_008520431.1 TIGRFAM: 30S ribosomal protein S11; HAMAP : Ribosomal protein S11; KEGG: SSU ribosomal protein S11P; PFAM: ribosomal protein S11 YP_008520432.1 TIGRFAM: 30S ribosomal protein S13; HAMAP : Ribosomal protein S13; KEGG: 30S ribosomal protein S13; PFAM: ribosomal protein S13 YP_008520433.1 TIGRFAM: ribosomal protein L36; HAMAP : 50S ribosomal protein L36; KEGG: 50S ribosomal protein L36; PFAM: ribosomal protein L36 YP_008520434.1 TIGRFAM: preprotein translocase, SecY subunit; HAMAP : Protein translocase subunit SecY; KEGG: preprotein translocase subunit SecY; PFAM: SecY protein YP_008520435.1 TIGRFAM: ribosomal protein L15; HAMAP : ribosomal protein L15; KEGG: 50S ribosomal protein L15; PFAM: Ribosomal protein L18e/L15 YP_008520436.1 TIGRFAM: ribosomal protein L30; HAMAP : ribosomal protein L30; KEGG: rpmD, 50S ribosomal protein L30; PFAM: Ribosomal protein L30, ferredoxin-like fold domain-containing protein YP_008520437.1 TIGRFAM: ribosomal protein S5; HAMAP : ribosomal protein S5; KEGG: rpsE, 30S ribosomal protein S5; PFAM: Ribosomal protein S5 , ribosomal protein S5 domain protein YP_008520438.1 TIGRFAM: ribosomal protein L18; HAMAP : ribosomal protein L18; KEGG: 50S ribosomal protein L18; PFAM: ribosomal protein L18P/L5E YP_008520439.1 TIGRFAM: ribosomal protein L6; HAMAP : Ribosomal protein L6, subgroup; KEGG: 50S ribosomal protein L6; PFAM: Ribosomal protein L6, alpha-beta domain-containing protein YP_008520440.1 KEGG: rpsH, 30S ribosomal subunit protein S8; HAMAP : ribosomal protein S8; PFAM: ribosomal protein S8 YP_008520441.1 KEGG: rpsN, 30S ribosomal protein S14; HAMAP : 30S ribosomal protein S14; PFAM: ribosomal protein S14 YP_008520442.1 KEGG: rplE, 50S ribosomal protein L5; HAMAP : Ribosomal protein L5; PFAM: ribosomal protein L5 YP_008520443.1 SMART: KOW domain protein; TIGRFAM: ribosomal protein L24; KEGG: 50S ribosomal protein L24; HAMAP : ribosomal protein L24; PFAM: KOW domain protein YP_008520444.1 TIGRFAM: ribosomal protein L14; HAMAP : ribosomal protein L14; KEGG: LSU ribosomal protein L14P; PFAM: ribosomal protein L14b/L23e YP_008520445.1 TIGRFAM: 30S ribosomal protein S17; HAMAP : Ribosomal protein S17; KEGG: 30S ribosomal protein S17; PFAM: ribosomal protein S17 YP_008520446.1 TIGRFAM: ribosomal protein L29; HAMAP : 50S ribosomal protein L29; KEGG: 50S ribosomal protein L29; PFAM: ribosomal protein L29 YP_008520447.1 TIGRFAM: ribosomal protein L16; HAMAP : 50S ribosomal protein L16; KEGG: 50S ribosomal protein L16; PFAM: Ribosomal protein L10e/L16 YP_008520448.1 SMART: KH domain protein; TIGRFAM: ribosomal protein S3; KEGG: rpsC, 30S ribosomal protein S3; HAMAP : ribosomal protein S3; PFAM: ribosomal protein S3- domain protein, KH type 2 domain protein YP_008520449.1 TIGRFAM: ribosomal protein L22; HAMAP : ribosomal protein L22; KEGG: rplV, 50S ribosomal protein L22; PFAM: ribosomal protein L22/L17 YP_008520450.1 TIGRFAM: ribosomal protein S19; HAMAP : ribosomal protein S19; KEGG: rpsS, 30S ribosomal protein S19; PFAM: ribosomal protein S19/S15 YP_008520451.1 TIGRFAM: ribosomal protein L2; HAMAP : ribosomal protein L2; KEGG: 50S ribosomal protein L2; PFAM: Ribosomal protein L2, C-terminal, Ribosomal Proteins L2, RNA binding domain YP_008520452.1 KEGG: rplW, 50S ribosomal protein L23; HAMAP : Ribosomal protein L25/L23; PFAM: Ribosomal protein L25/L23 YP_008520453.1 TIGRFAM: ribosomal protein L4/L1e; HAMAP : ribosomal protein L4/L1e; KEGG: 50S ribosomal protein L4; PFAM: ribosomal protein L4/L1e YP_008520454.1 TIGRFAM: 50S ribosomal protein L3; HAMAP : Ribosomal protein L3; KEGG: 50S ribosomal protein L3; PFAM: ribosomal protein L3 YP_008520455.1 TIGRFAM: ribosomal protein S10; HAMAP : 30S ribosomal protein S10; KEGG: 30S ribosomal protein S10; PFAM: ribosomal protein S10 YP_008520456.1 KEGG: bfr, bacterioferritin, iron storage and detoxification protein YP_008520457.1 TIGRFAM: translation elongation factor Tu, small GTP-binding protein; HAMAP : translation elongation factor Tu; KEGG: translation elongation factor Tu; PFAM: protein synthesis factor GTP-binding protein, elongation factor Tu domain 2 protein, elongation factor Tu domain-containing protein YP_008520458.1 SMART: elongation factor G domain IV, elongation factor G domain-containing protein; TIGRFAM: translation elongation factor G, small GTP-binding protein; KEGG: translation elongation factor G; HAMAP : translation elongation factor G; PFAM: protein synthesis factor GTP-binding protein, elongation factor G domain IV, elongation factor G domain-containing protein, elongation factor Tu domain 2 protein YP_008520459.1 TIGRFAM: ribosomal protein S7; HAMAP : ribosomal protein S7; KEGG: 30S ribosomal protein S7; PFAM: Ribosomal protein S7 domain YP_008520460.1 TIGRFAM: ribosomal protein S12; HAMAP : ribosomal protein S12; KEGG: rpsL, 30S ribosomal protein S12; PFAM: ribosomal protein S12/S23 YP_008520461.1 TIGRFAM: sulfur relay protein TusB/DsrH; HAMAP : Protein tusB; KEGG: sulfur relay protein TusB/DsrH; PFAM: DsrH family protein YP_008520462.1 TIGRFAM: sulfur relay protein TusC/DsrF; HAMAP : Protein tusC; KEGG: sulfur relay protein TusC; PFAM: DsrE family protein YP_008520463.1 TIGRFAM: sulfur relay protein TusD/DsrE; HAMAP : Sulfurtransferase tusD; KEGG: hypothetical protein; PFAM: DsrE family protein YP_008520464.1 PFAM: YheO-like domain-containing protein; KEGG: YheO domain-containing protein YP_008520465.1 PFAM: sulfatase, protein of unknown function DUF1705; KEGG: yjdB, hypothetical protein YP_008520466.1 KEGG: winged helix family two component transcriptional regulator; PFAM: response regulator receiver, transcriptional regulator domain-containing protein; SMART: response regulator receiver, transcriptional regulator domain-containing protein YP_008520467.1 KEGG: sensor protein BasS/PmrB; PFAM: ATP-binding region ATPase domain protein, histidine kinase A domain protein, histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein YP_008520468.1 PFAM: ABC transporter related protein; KEGG: ABC transporter; SMART: AAA ATPase YP_008520469.1 KEGG: polar amino acid ABC transporter permease; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: ABC-type transporter, integral membrane subunit YP_008520470.1 KEGG: family 3 extracellular solute-binding protein; PFAM: ABC-type transporter, periplasmic subunit family 3; SMART: ABC-type transporter, periplasmic subunit family 3 YP_008520471.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_008520472.1 KEGG: hypothetical protein YP_008520473.1 KEGG: GntR family transcriptional regulator; PFAM: aminotransferase class I and II, regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_008520474.1 KEGG: FKBP-type peptidyl-prolyl isomerase domain-containing protein; PFAM: FKBP-type peptidyl-prolyl isomerase domain protein, peptidylprolyl isomerase FKBP-type YP_008520475.1 KEGG: SlyX family protein; HAMAP : Protein slyX; PFAM: SlyX family protein YP_008520476.1 KEGG: AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC domain-containing protein; SMART: Helix-turn-helix, AraC domain-containing protein YP_008520477.1 PFAM: aminoglycoside phosphotransferase; KEGG: aminoglycoside phosphotransferase YP_008520478.1 TIGRFAM: ethanolamine transporter; KEGG: yhfM, Ethanolamin permease YP_008520479.1 KEGG: FKBP-type peptidylprolyl isomerase; PFAM: peptidylprolyl isomerase FKBP-type YP_008520480.1 KEGG: hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02443; PFAM: Conserved hypothetical protein CHP02443 YP_008520481.1 TIGRFAM: potassium efflux system protein; HAMAP : Glutathione-regulated potassium-efflux system protein kefB; KEGG: kefB, glutathione-regulated potassium-efflux system protein kefB; PFAM: sodium/hydrogen exchanger, TrkA-N domain protein YP_008520482.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: kefG, potassium effux complex protein YP_008520483.1 KEGG: ABC transporter ATP-binding protein; PFAM: ABC transporter related protein; SMART: AAA ATPase YP_008520484.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: LysE family transporter YP_008520485.1 PFAM: alpha/beta hydrolase fold containing protein; KEGG: hydrolase YP_008520486.1 KEGG: yheU, hypothetical protein; HAMAP : UPF0270 protein yheU; PFAM: protein of unknown function UPF0270 YP_008520487.1 KEGG: phosphoribulokinase; PFAM: phosphoribulokinase/uridine kinase YP_008520488.1 PFAM: Succinylglutamate desuccinylase/aspartoacylase; TIGRFAM: succinylglutamate desuccinylase; HAMAP : Succinylglutamate desuccinylase; KEGG: succinylglutamate desuccinylase YP_008520489.1 PFAM: Succinylarginine dihydrolase; TIGRFAM: succinylarginine dihydrolase; HAMAP : N-succinylarginine dihydrolase; KEGG: astB, succinylarginine dihydrolase YP_008520490.1 PFAM: Aldehyde Dehydrogenase; TIGRFAM: succinylglutamic semialdehyde dehydrogenase; HAMAP : N-succinylglutamate 5-semialdehyde dehydrogenase; KEGG: succinylglutamic semialdehyde dehydrogenase YP_008520491.1 TIGRFAM: arginine N-succinyltransferase, arginine/ornithine succinyltransferase subunit; KEGG: arginine N-succinyltransferase; PFAM: arginine N-succinyltransferase beta subunit YP_008520492.1 PFAM: aminotransferase class-III; TIGRFAM: succinylornithine transaminase family, acetylornithine and succinylornithine aminotransferase; HAMAP : Acetylornithine/succinyldiaminopimelate aminotransferase; KEGG: acetylornithine/succinylornithine aminotransferase YP_008520493.1 PFAM: MmgE/PrpD family protein; KEGG: MmgE/PrpD family protein YP_008520494.1 PFAM: polysaccharide deacetylase; KEGG: polysaccharide deacetylase; overlaps another CDS with the same product name YP_008520495.1 PFAM: polysaccharide deacetylase; KEGG: polysaccharide deacetylase; overlaps another CDS with the same product name YP_008520496.1 KEGG: family 3 extracellular solute-binding protein; PFAM: ABC-type transporter, periplasmic subunit family 3; SMART: ABC-type transporter, periplasmic subunit family 3 YP_008520497.1 PFAM: ABC transporter related protein; KEGG: ABC transporter-like protein; SMART: AAA ATPase YP_008520498.1 KEGG: polar amino acid ABC transporter permease; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: ABC-type transporter, integral membrane subunit YP_008520499.1 PFAM: Lyase 1, N-terminal; TIGRFAM: argininosuccinate lyase; HAMAP : Argininosuccinate lyase; KEGG: argininosuccinate lyase YP_008520500.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: LysR family transcripitonal regulator YP_008520501.1 PFAM: OsmC family protein; KEGG: OsmC family protein YP_008520502.1 KEGG: CarD family transcriptional regulator; PFAM: cyclic nucleotide-binding protein, regulatory protein Crp; SMART: cyclic nucleotide-binding protein, regulatory protein Crp YP_008520503.1 PFAM: aminotransferase class-III; TIGRFAM: succinylornithine transaminase family, acetylornithine and succinylornithine aminotransferase; HAMAP : Acetylornithine/succinyldiaminopimelate aminotransferase; KEGG: argD, bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein YP_008520504.1 TIGRFAM: glutamine amidotransferase of anthranilate synthase; KEGG: para-aminobenzoate synthase component II; PFAM: Glutamine amidotransferase type 1 YP_008520505.1 KEGG: P4 alpha zinc-binding domain-containing protein; PFAM: P4 alpha zinc-binding domain protein; SMART: P4 alpha zinc-binding domain protein YP_008520506.1 KEGG: prophage protein YP_008520507.1 PFAM: Prophage CP4-57 regulatory; KEGG: phage transcriptional regulator AlpA YP_008520508.1 PFAM: Integrase catalytic domain, putative, Putative integrase, N-terminal; KEGG: putative DNA-binding prophage protein YP_008520511.1 PFAM: protein of unknown function DUF1044; KEGG: hypothetical protein YP_008520512.1 KEGG: hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_008520513.1 KEGG: hypothetical protein YP_008520515.1 KEGG: hypothetical protein YP_008520516.1 KEGG: hypothetical protein YP_008520517.1 PFAM: integrase family protein; KEGG: integrase family protein YP_008520518.1 PFAM: transposase IS3/IS911 family protein; KEGG: hypothetical protein YP_008520519.1 PFAM: Integrase catalytic region; KEGG: tnpA, putative transposase YP_008520520.1 PFAM: integrase family protein; KEGG: integrase family protein YP_008520521.1 PFAM: Domain of unknown function DUF4102; KEGG: integrase family protein YP_008520522.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: short-chain dehydrogenase/reductase; SMART: Polyketide synthase/Fatty acid synthase, KR YP_008520523.1 KEGG: putative alkyl hydroperoxide reductase YP_008520524.1 PFAM: Glutathione S-transferase domain-containing protein; KEGG: gst, glutathionine S-transferase YP_008520525.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: LysR family transcriptional regulator YP_008520526.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: enoyl-CoA hydratase/isomerase YP_008520527.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: NADH:flavin oxidoreductase/NADH oxidase YP_008520528.1 KEGG: pectate lyase/Amb allergen; PFAM: Pectate lyase/Amb allergen; SMART: Pectate lyase/Amb allergen YP_008520529.1 KEGG: Pectate lyase/Amb allergen; PFAM: Pectate lyase/Amb allergen; SMART: Pectate lyase/Amb allergen YP_008520530.1 KEGG: pectate lyase YP_008520531.1 TIGRFAM: diguanylate cyclase, hemerythrin-like metal-binding protein; PFAM: GGDEF domain containing protein; KEGG: diguanylate cyclase with hemerythrin-like metal-binding domain; SMART: GGDEF domain containing protein YP_008520532.1 KEGG: ppiA, peptidyl-prolyl cis-trans isomerase ppiA; PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type YP_008520533.1 KEGG: mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing protein; SMART: Mandelate racemase/muconate lactonizing protein YP_008520534.1 TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; KEGG: glgP, glycogen phosphorylase; PFAM: glycosyl transferase family 35 YP_008520535.1 PFAM: Starch synthase catalytic domain-containing protein, glycosyl transferase group 1; TIGRFAM: glycogen/starch synthase, ADP-glucose type; HAMAP : Glycogen synthase; KEGG: glycogen/starch synthase, ADP-glucose type YP_008520536.1 PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate adenylyltransferase; HAMAP : Glucose-1-phosphate adenylyltransferase; KEGG: glgC, glucose-1-phosphate adenylyltransferase YP_008520537.1 KEGG: glycogen debranching enzyme; PFAM: glycoside hydrolase family 13 domain protein, alpha amylase catalytic region; TIGRFAM: glycogen debranching enzyme GlgX; HAMAP : Glycogen debranching enzyme; SMART: alpha amylase catalytic sub domain-containing protein YP_008520538.1 KEGG: 1,4-alpha-glucan branching protein; PFAM: glycoside hydrolase family 13 domain protein, alpha amylase all-beta, alpha amylase catalytic region; TIGRFAM: 1,4-alpha-glucan branching enzyme; HAMAP : 1,4-alpha-glucan-branching enzyme; SMART: alpha amylase catalytic sub domain-containing protein YP_008520539.1 KEGG: signal transduction histidine kinase LytS; PFAM: 5TM Receptors of the LytS-YhcK type transmembrane region, ATP-binding region ATPase domain protein, histidine kinase internal region; SMART: GAF domain protein YP_008520540.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: hypothetical protein YP_008520542.1 KEGG: putative AraC-family regulatory protein; PFAM: AraC protein arabinose-binding/dimerization, Helix-turn-helix, AraC domain-containing protein; SMART: Helix-turn-helix, AraC domain-containing protein YP_008520544.1 PFAM: Protein of unknown function DUF2893; KEGG: hypothetical protein YP_008520545.1 PFAM: Domain of unknown function DUF1814; KEGG: ync, hypothetical protein YP_008520546.1 KEGG: hypothetical protein; HAMAP : UPF0597 protein yhaM; PFAM: serine dehydratase alpha chain YP_008520547.1 PFAM: NADP-dependent oxidoreductase domain; KEGG: putative oxidoreductase, aryl-alcohol dehydrogenase like protein YP_008520548.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transporters inner membrane component YP_008520549.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transporters inner membrane component YP_008520550.1 KEGG: nickel ABC transporter substrate-binding protein; TIGRFAM: nickel ABC transporter, periplasmic nickel-binding protein; PFAM: ABC-type transporter, periplasmic subunit YP_008520551.1 PFAM: Methyltransferase type 11; KEGG: type 11 methyltransferase YP_008520552.1 KEGG: CopG family transcriptional regulator; HAMAP : nickel-responsive regulator; PFAM: NikR nickel binding protein, CopG-like domain-containing protein DNA-binding protein YP_008520553.1 KEGG: beta-lactamase; PFAM: beta-lactamase domain protein; SMART: beta-lactamase domain protein YP_008520554.1 KEGG: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase dimerization region, Semialdehyde dehydrogenase NAD - binding protein; TIGRFAM: aspartate-semialdehyde dehydrogenase; HAMAP : aspartate-semialdehyde dehydrogenase; SMART: Semialdehyde dehydrogenase NAD - binding protein YP_008520555.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: multiple antibiotic resistance (MarC)-like protein YP_008520556.1 KEGG: gntP, gluconate permease; TIGRFAM: gluconate transporter; PFAM: Gluconate transporter YP_008520557.1 TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; KEGG: gntK, gluconokinase; PFAM: shikimate kinase YP_008520558.1 KEGG: LacI family transcriptional regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator, regulatory protein LacI; SMART: regulatory protein LacI YP_008520559.1 PFAM: Pirin domain protein; KEGG: Pirin domain-containing protein YP_008520560.1 KEGG: glycerol-3-phosphate dehydrogenase anaerobic subunit C; TIGRFAM: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein, 4Fe-4S ferredoxin, iron-sulpur binding domain-containing protein YP_008520561.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; TIGRFAM: glycerol-3-phosphate dehydrogenase, anaerobic, B subunit; HAMAP : Anaerobic glycerol-3-phosphate dehydrogenase subunit B; KEGG: glycerol-3-phosphate dehydrogenase anaerobic subunit B YP_008520562.1 TIGRFAM: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit; KEGG: sn-glycerol-3-phosphate dehydrogenase subunit A; PFAM: FAD dependent oxidoreductase, BFD domain protein [2Fe-2S]-binding domain protein YP_008520563.1 KEGG: glpT, sn-glycerol-3-phosphate transporter; TIGRFAM: glycerol-3-phosphate transporter, phosphoglycerate transporter; PFAM: major facilitator superfamily MFS_1 YP_008520564.1 KEGG: Cof-like hydrolase; TIGRFAM: Cof-like hydrolase, HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3 YP_008520565.1 KEGG: lysophospholipase L2; PFAM: Alpha/beta hydrolase, N-terminal YP_008520566.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: rhtB, homoserine/homoserine lactone efflux protein YP_008520567.1 TIGRFAM: ATP-dependent DNA helicase RecQ, ATP-dependent DNA helicase, RecQ family; PFAM: RQC domain-containing protein, HRDC domain protein, DEAD/DEAH box helicase domain protein, helicase domain-containing protein; KEGG: ATP-dependent DNA helicase RecQ; SMART: RQC domain-containing protein, helicase domain-containing protein, HRDC domain protein, DEAD-like helicase YP_008520568.1 KEGG: phospholipase A; PFAM: phospholipase A1 YP_008520569.1 KEGG: hypothetical protein; TIGRFAM: phenylacetic acid degradation-related protein; PFAM: thioesterase superfamily protein YP_008520570.1 KEGG: RarD protein, DMT superfamily transporter; TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane YP_008520571.1 KEGG: abrB, transporter; TIGRFAM: membrane protein AbrB duplication; PFAM: ammonia monooxygenase YP_008520572.1 KEGG: magnesium/nickel/cobalt transporter CorA; TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein YP_008520573.1 KEGG: DNA helicase II; TIGRFAM: DNA helicase II; PFAM: UvrD-like DNA helicase , Helicase superfamily 1 UvrD-related protein YP_008520574.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1, HAD-superfamily hydrolase, subfamily IA, variant 3; KEGG: HAD-superfamily hydrolase YP_008520575.1 TIGRFAM: tyrosine recombinase XerC; HAMAP : Tyrosine recombinase xerC; KEGG: xerC, site-specific tyrosine recombinase XerC; PFAM: integrase family protein, integrase domain protein SAM domain protein YP_008520576.1 PFAM: protein of unknown function DUF484; KEGG: hypothetical protein YP_008520577.1 TIGRFAM: diaminopimelate epimerase; HAMAP : Diaminopimelate epimerase; KEGG: diaminopimelate epimerase; PFAM: diaminopimelate epimerase YP_008520578.1 KEGG: outer membrane lipoprotein YP_008520579.1 TIGRFAM: iron donor protein CyaY; HAMAP : Protein cyaY; KEGG: iron donor protein CyaY; PFAM: Frataxin family protein YP_008520580.1 KEGG: cyaA, adenylate cyclase; PFAM: adenylate cyclase class-I, Adenylate cyclase class-I, N-terminal domain YP_008520581.1 TIGRFAM: porphobilinogen deaminase; HAMAP : Porphobilinogen deaminase; KEGG: hemC, hydroxymethylbilane synthase; PFAM: Porphobilinogen deaminase domain-containing protein YP_008520582.1 KEGG: hemD, uroporphyrinogen III synthase; PFAM: Uroporphyrinogen III synthase HEM4 YP_008520583.1 KEGG: hemX, uroporphyrinogen III methylase; PFAM: hemX domain protein YP_008520584.1 TIGRFAM: HemY protein; PFAM: HemY domain protein; KEGG: HemY protein; SMART: Tetratricopeptide repeat-containing protein YP_008520585.1 TIGRFAM: 6-phosphogluconate dehydratase; KEGG: phosphogluconate dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase YP_008520586.1 TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; KEGG: thermoresistant glucokinase family carbohydrate kinase; PFAM: shikimate kinase YP_008520587.1 KEGG: LacI family transcriptional regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator, regulatory protein LacI; SMART: regulatory protein LacI YP_008520588.1 KEGG: gluconate transporter; TIGRFAM: gluconate transporter; PFAM: Gluconate transporter YP_008520589.1 KEGG: gluconate 5-dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR YP_008520590.1 KEGG: L-idonate 5-dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein, Alcohol dehydrogenase GroES domain protein YP_008520591.1 PFAM: ThiJ/PfpI domain-containing protein; KEGG: ThiJ/PfpI YP_008520592.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein, Alcohol dehydrogenase GroES domain protein; KEGG: NADPH quinone reductase or zn-dependent oxidoreductase; SMART: Polyketide synthase, enoylreductase YP_008520593.1 PFAM: Protein of unknown function, inner membrane,YgjV; KEGG: hypothetical protein YP_008520594.1 PFAM: Ham1 family protein; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; HAMAP : Nucleoside-triphosphatase rdgB; KEGG: xanthosine triphosphate pyrophosphatase YP_008520595.1 KEGG: hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3, protein of unknown function DUF455 YP_008520596.1 TIGRFAM: trehalose-phosphatase, HAD-superfamily hydrolase, subfamily IIB; KEGG: otsB, trehalose-6-phosphate phosphatase; PFAM: trehalose-phosphatase YP_008520597.1 TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming]; KEGG: otsA, alpha,alpha-trehalose-phosphate synthase; PFAM: glycosyl transferase family 20 YP_008520598.1 PFAM: NUDIX hydrolase; KEGG: ADP-ribose pyrophosphatase YP_008520599.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; KEGG: putative 2-deoxyglucose-6-phosphatase YP_008520600.1 KEGG: acbO, 2-epi-5-epi-valiolone-7-phosphate 2-epimerase YP_008520601.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: dehydrogenase YP_008520602.1 PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: acbL, cyclitol dehydrogenase YP_008520603.1 PFAM: ROK family protein; KEGG: acbM, 2-epi-5-epi-valiolone 7-kinase YP_008520604.1 KEGG: 3-dehydroquinate synthase YP_008520605.1 KEGG: alpha/beta hydrolase fold YP_008520606.1 SMART: regulatory protein MerR; KEGG: MerR family transcriptional regulator YP_008520607.1 PFAM: acyltransferase 3; KEGG: acyltransferase YP_008520608.1 PFAM: oxidoreductase domain protein, Oxidoreductase domain-containing protein; KEGG: dehydrogenase YP_008520609.1 PFAM: major facilitator superfamily MFS_1; KEGG: MFS superfamily arabinose exporter YP_008520610.1 PFAM: NUDIX hydrolase; KEGG: MutT/nudix family protein YP_008520611.1 PFAM: nucleoside 2-deoxyribosyltransferase; KEGG: nucleoside 2-deoxyribosyltransferase YP_008520612.1 PFAM: thymidylate synthase; KEGG: thymidylate synthase protein YP_008520613.1 PFAM: Methyltransferase type 11; KEGG: UbiE/COQ5 family methlytransferase YP_008520614.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: DMT family permease YP_008520615.1 KEGG: ABC transporter substrate-binding protein YP_008520616.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: ABC transporter permease YP_008520617.1 PFAM: ABC transporter related protein; KEGG: ABC transporter-like protein; SMART: AAA ATPase YP_008520618.1 KEGG: mtaD, 5-methylthioadenosine/s-adenosylhomocysteine deaminase; PFAM: amidohydrolase YP_008520619.1 TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; KEGG: UDP-N-acetyl-D-mannosaminuronic acid transferase; PFAM: glycosyl transferase WecB/TagA/CpsF YP_008520620.1 PFAM: WzyE family protein; KEGG: common antigen polymerase YP_008520621.1 PFAM: 4-alpha-L-fucosyltransferase; KEGG: 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) YP_008520622.1 PFAM: polysaccharide biosynthesis protein; KEGG: polysaccharide biosynthesis protein YP_008520623.1 KEGG: TDP-4-oxo-6-deoxy-D-glucose transaminase; TIGRFAM: TDP-4-keto-6-deoxy-D-glucose transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase YP_008520624.1 KEGG: TDP-fucosamine acetyltransferase; TIGRFAM: TDP-D-fucosamine acetyltransferase; PFAM: GCN5-related N-acetyltransferase YP_008520625.1 SMART: UDP-glucose/GDP-mannose dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; KEGG: wecC, UDP-N-acetyl-D-mannosamine dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase dimerization, UDP-glucose/GDP-mannose dehydrogenase YP_008520626.1 TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase YP_008520627.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: lipopolysaccharide biosynthesis protein WzzE YP_008520628.1 KEGG: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase; TIGRFAM: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase; PFAM: glycosyl transferase family 4 YP_008520629.1 SMART: Cold shock protein, AAA ATPase, Rho termination factor domain protein; TIGRFAM: transcription termination factor Rho; KEGG: rho, transcription termination factor Rho; HAMAP : transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region, Rho termination factor RNA-binding protein, Rho termination factor domain protein YP_008520630.1 KEGG: thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain-containing protein YP_008520631.1 HAMAP : ATP-dependent RNA helicase rhlB; PFAM: DEAD/DEAH box helicase domain protein, helicase domain-containing protein; KEGG: DEAD/DEAH box helicase domain-containing protein; SMART: DEAD-like helicase , helicase domain-containing protein YP_008520632.1 HAMAP : Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase; KEGG: guanosine pentaphosphate phosphohydrolase; PFAM: Ppx/GppA phosphatase YP_008520634.1 PFAM: glycoside hydrolase family 28, Fibronectin type III domain protein; KEGG: glycoside hydrolase family protein; SMART: Fibronectin type III domain protein, Parallel beta-helix repeat YP_008520635.1 KEGG: rep, ATP-dependent DNA helicase Rep; TIGRFAM: ATP-dependent DNA helicase Rep; PFAM: UvrD-like DNA helicase , Helicase superfamily 1 UvrD-related protein YP_008520636.1 KEGG: PpiC-type peptidyl-prolyl cis-trans isomerase YP_008520637.1 TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; KEGG: putA, proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase; PFAM: Proline dehydrogenase, Aldehyde Dehydrogenase YP_008520638.1 KEGG: putP, sodium/proline symporter; TIGRFAM: sodium/proline symporter, SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter YP_008520639.1 PFAM: Acetohydroxy acid isomeroreductase catalytic domain-containing protein, acetohydroxy acid isomeroreductase; TIGRFAM: ketol-acid reductoisomerase; HAMAP : Ketol-acid reductoisomerase; KEGG: ilvC, ketol-acid reductoisomerase, NAD(P)-binding protein YP_008520640.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: ilvY, DNA-binding transcriptional dual regulator YP_008520641.1 KEGG: hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02453; PFAM: Conserved hypothetical protein CHP02453 YP_008520642.1 KEGG: ilvA, Threonine dehydratase biosynthetic; TIGRFAM: threonine dehydratase, biosynthetic; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit, Threonine dehydratase domain-containing protein YP_008520643.1 PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; TIGRFAM: dihydroxy-acid dehydratase; HAMAP : Dihydroxy-acid dehydratase; KEGG: dihydroxy-acid dehydratase YP_008520644.1 TIGRFAM: branched-chain amino acid aminotransferase; KEGG: branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV YP_008520645.1 KEGG: ilvM, acetolactate synthase II, small subunit YP_008520646.1 TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; KEGG: acetolactate synthase 2 catalytic subunit; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein, thiamine pyrophosphate central domain-containing protein YP_008520647.1 PFAM: major facilitator superfamily MFS_1; KEGG: major facilitator superfamily protein YP_008520648.1 TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit, Mg chelatase-related protein, C-terminal domain; KEGG: yifB, MG(2+) chelatase family protein/ComM-related protein; SMART: AAA ATPase YP_008520649.1 PFAM: protein of unknown function DUF413; KEGG: hypothetical protein YP_008520650.1 PFAM: regulatory protein LysR, LysR substrate-binding protein; KEGG: hdfR, transcriptional regulator HdfR YP_008520651.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: inner membrane ABC transporter permease YjfF YP_008520652.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: ABC transporter YP_008520653.1 PFAM: ABC transporter related protein; KEGG: sugar ABC transporter ATP-binding protein; SMART: AAA ATPase YP_008520654.1 PFAM: Periplasmic binding protein domain; KEGG: periplasmic binding protein/LacI transcriptional regulator YP_008520655.1 PFAM: Asp/Glu/hydantoin racemase; TIGRFAM: glutamate racemase; HAMAP : Glutamate racemase; KEGG: glutamate racemase YP_008520656.1 TIGRFAM: TonB-dependent vitamin B12 receptor; HAMAP : Vitamin B12 transporter btuB; KEGG: btuB, vitamin B12/cobalamin outer membrane transporter; PFAM: TonB-dependent receptor plug, TonB-dependent receptor YP_008520657.1 TIGRFAM: tRNA (uracil-5-)-methyltransferase; HAMAP : tRNA (uracil-5-)-methyltransferase; KEGG: tRNA (uracil-5-)-methyltransferase; PFAM: (Uracil-5)-methyltransferase YP_008520658.1 PFAM: protein of unknown function DUF1422; KEGG: hypothetical protein YP_008520659.1 PFAM: regulatory protein TetR; KEGG: fabR, DNA-binding transcriptional regulator FabR YP_008520660.1 HAMAP : Soluble pyridine nucleotide transhydrogenase; KEGG: soluble pyridine nucleotide transhydrogenase; PFAM: Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain, pyridine nucleotide-disulfide oxidoreductase dimerization region, FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_008520661.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: oxyR, DNA-binding transcriptional dual regulator YP_008520662.1 TIGRFAM: 5,10-methylenetetrahydrofolate reductase; KEGG: metF, 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase YP_008520663.1 KEGG: aspartate kinase; TIGRFAM: aspartate kinase; PFAM: homoserine dehydrogenase, aspartate/glutamate/uridylate kinase, homoserine dehydrogenase NAD-binding protein YP_008520664.1 KEGG: O-succinylhomoserine (thiol)-lyase; TIGRFAM: O-succinylhomoserine (thiol)-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_008520665.1 KEGG: transcriptional repressor protein MetJ; HAMAP : Met repressor; PFAM: Methionine repressor MetJ YP_008520666.1 TIGRFAM: ribosomal protein L31; HAMAP : 50S ribosomal protein L31; KEGG: rpmE, 50S ribosomal protein L31; PFAM: ribosomal protein L31 YP_008520667.1 TIGRFAM: primosomal protein N; PFAM: DEAD/DEAH box helicase domain protein, helicase domain-containing protein; KEGG: primosome assembly protein PriA; SMART: DEAD-like helicase , helicase domain-containing protein YP_008520668.1 KEGG: cytR, DNA-binding transcriptional regulator CytR; PFAM: regulatory protein LacI; SMART: regulatory protein LacI YP_008520669.1 KEGG: cell division protein FtsN; TIGRFAM: cell division protein FtsN; PFAM: Sporulation domain-containing protein YP_008520670.1 TIGRFAM: ATP-dependent protease HslVU, peptidase subunit; HAMAP : ATP-dependent protease hslV; KEGG: ATP-dependent protease peptidase subunit; PFAM: 20S proteasome A and B subunits YP_008520671.1 SMART: Clp ATPase domain-containing protein, AAA ATPase; TIGRFAM: heat shock protein HslVU, ATPase subunit HslU; KEGG: heat shock protein HslVU, ATPase subunit HslU; HAMAP : ATP-dependent hsl protease ATP-binding subunit hslU; PFAM: ATPase AAA-2 domain protein, Clp ATPase domain-containing protein, AAA ATPase central domain protein YP_008520672.1 KEGG: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; PFAM: UbiA prenyltransferase YP_008520673.1 TIGRFAM: regulator of ribonuclease activity A; HAMAP : Regulator of ribonuclease activity A; KEGG: ribonuclease activity regulator protein RraA; PFAM: Dimethylmenaquinone methyltransferase YP_008520674.1 KEGG: yiiU, hypothetical protein; HAMAP : Cell division protein zapB; PFAM: protein of unknown function DUF904 YP_008520675.1 KEGG: glycerol uptake facilitator protein; TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein YP_008520676.1 PFAM: Carbohydrate kinase, FGGY; TIGRFAM: glycerol kinase; HAMAP : Glycerol kinase; KEGG: glpK, glycerol kinase YP_008520677.1 TIGRFAM: fructose-1,6-bisphosphatase, class II; KEGG: glpX, Fructose-1,6-bisphosphatase, GlpX type; PFAM: GlpX family protein YP_008520678.1 KEGG: oxidoreductase FAD/NAD(P)-binding domain-containing protein; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein, Oxidoreductase FAD-binding domain protein YP_008520679.1 PFAM: protein of unknown function DUF805; KEGG: yiiR, hypothetical protein YP_008520680.1 PFAM: protein of unknown function DUF1454; KEGG: hypothetical protein YP_008520681.1 PFAM: triosephosphate isomerase; TIGRFAM: triosephosphate isomerase; HAMAP : Triosephosphate isomerase, bacterial/eukaryotic; KEGG: triosephosphate isomerase YP_008520682.1 PFAM: Porphyromonas-type peptidyl-arginine deiminase; TIGRFAM: agmatine deiminase; HAMAP : Agmatine deiminase; KEGG: agmatine deiminase YP_008520683.1 TIGRFAM: N-carbamoylputrescine amidase; KEGG: N-carbamoylputrescine amidase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_008520684.1 PFAM: phosphofructokinase; TIGRFAM: 6-phosphofructokinase; HAMAP : 6-phosphofructokinase; KEGG: pfkA, 6-phosphofructokinase YP_008520685.1 TIGRFAM: cation diffusion facilitator family transporter; HAMAP : Ferrous-iron efflux pump fieF; KEGG: cation diffusion facilitator family transporter; PFAM: cation efflux protein YP_008520686.1 KEGG: XRE family transcriptional regulator; PFAM: 2TM domain, helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_008520687.1 PFAM: NUDIX hydrolase; KEGG: NUDIX hydrolase YP_008520688.1 KEGG: IclR family transcriptional regulator; PFAM: regulatory protein IclR, Transcriptional regulator IclR; SMART: regulatory protein IclR YP_008520689.1 KEGG: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain-containing protein 8; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein, D-isomer specific 2-hydroxyacid dehydrogenase catalytic region-containing protein YP_008520690.1 PFAM: protein of unknown function DUF894 DitE; KEGG: major facilitator superfamily transporter YP_008520691.1 KEGG: Aspartate/tyrosine/aromatic aminotransferase; PFAM: aminotransferase class I and II YP_008520692.1 PFAM: ABC transporter related protein; KEGG: aapP, amino-acid ABC transporter ATP-binding protein; SMART: AAA ATPase YP_008520693.1 KEGG: polar amino acid ABC transporter permease; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: ABC-type transporter, integral membrane subunit YP_008520694.1 KEGG: polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: ABC-type transporter, integral membrane subunit YP_008520695.1 KEGG: amino acid ABC transporter/signal transduction system periplasmic protein/domain-containing protein; PFAM: ABC-type transporter, periplasmic subunit family 3; SMART: ABC-type transporter, periplasmic subunit family 3 YP_008520696.1 PFAM: protein of unknown function Spy-related protein; KEGG: cpxP, hypothetical protein YP_008520697.1 KEGG: winged helix family two component transcriptional regulator; PFAM: response regulator receiver, transcriptional regulator domain-containing protein; SMART: response regulator receiver, transcriptional regulator domain-containing protein YP_008520698.1 KEGG: two component sensor kinase; PFAM: ATP-binding region ATPase domain protein, histidine kinase A domain protein, histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein, histidine kinase HAMP region domain protein YP_008520699.1 KEGG: hypothetical protein YP_008520700.1 PFAM: Protein of unknown function DUF3142; KEGG: hypothetical protein YP_008520701.1 KEGG: yibK, rRNA methylase; HAMAP : S-adenosyl-L-methionine dependent tRNA/rRNA methyltransferase, SpoU; PFAM: tRNA/rRNA methyltransferase (SpoU) YP_008520703.1 PFAM: Auxin Efflux Carrier; KEGG: auxin efflux carrier YP_008520704.1 KEGG: glycerophosphoryl diester phosphodiesterase; PFAM: glycerophosphoryl diester phosphodiesterase YP_008520705.1 PFAM: ABC transporter related protein, Transport-associated OB domain-containing protein; KEGG: ugpC, glycerol-3-phosphate ABC transporter ATP-binding protein; SMART: AAA ATPase YP_008520706.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: ugpE, glycerol-3-phosphate ABC transporter YP_008520707.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: ugpA, glycerol-3-phosphate transporter permease YP_008520708.1 KEGG: ugpB, substrate-binding protein of sn-glycerol 3-phosphate transport system YP_008520709.1 KEGG: DeoR family transcriptional regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_008520710.1 KEGG: oxidoreductase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding protein YP_008520711.1 PFAM: type III effector Hrp-dependent outer protein; KEGG: hypothetical protein YP_008520712.1 KEGG: class II aldolase/adducin family protein; PFAM: class II aldolase/adducin family protein; SMART: class II aldolase/adducin family protein YP_008520713.1 KEGG: hydroxypyruvate isomerase; PFAM: Xylose isomerase domain-containing protein TIM barrel YP_008520714.1 KEGG: gluconate transporter; TIGRFAM: gluconate transporter; PFAM: Gluconate transporter YP_008520716.1 KEGG: methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer, 4HB MCP domain; SMART: chemotaxis sensory transducer YP_008520717.1 KEGG: GntR family transcriptional regulator; PFAM: aminotransferase class I and II YP_008520718.1 PFAM: ABC transporter related protein; KEGG: livF, leucine/isoleucine/valine ABC transporter ATP-binding protein; SMART: AAA ATPase YP_008520719.1 PFAM: ABC transporter related protein; KEGG: ABC transporter; SMART: AAA ATPase YP_008520720.1 PFAM: ABC-type transporter, integral membrane subunit, Protein of unknown function DUF3382; KEGG: livM, leucine/isoleucine/valine transporter permease subunit YP_008520721.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: livH, leucine/isoleucine/valine ABC transporter YP_008520722.1 KEGG: Extracellular ligand-binding receptor YP_008520723.1 PFAM: Domain of unknown function DUF3749; KEGG: GCN5-related N-acetyltransferase YP_008520724.1 KEGG: RNA polymerase factor sigma-32; TIGRFAM: RNA polymerase sigma factor RpoH, RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein, sigma-70 region 4 domain protein YP_008520725.1 KEGG: protein insertion ABC transporter inner membrane subunit FtsX; TIGRFAM: protein insertion ABC transporter, inner membrane subunit FtsX; PFAM: protein of unknown function DUF214 YP_008520726.1 SMART: AAA ATPase; TIGRFAM: Type II Secretory Pathway (IISP) Family protein, cell division ATP-binding protein FtsE; KEGG: Type II (General) Secretory Pathway (IISP) Family protein; PFAM: ABC transporter related protein YP_008520727.1 SMART: GTP-binding signal recognition particle SRP54 G- domain-containing protein, GTP-binding signal recognition particle SRP54 helical bundle, AAA ATPase; TIGRFAM: signal recognition particle-docking protein FtsY; KEGG: signal recognition particle-docking protein FtsY; HAMAP : cell division transporter substrate-binding protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain-containing protein, GTP-binding signal recognition particle SRP54 helical bundle YP_008520728.1 TIGRFAM: methyltransferase; KEGG: methyltransferase; PFAM: Conserved hypothetical protein CHP00095 YP_008520729.1 PFAM: protein of unknown function DUF1145; KEGG: hypothetical protein YP_008520730.1 PFAM: Domain of unknown function DUF1820; KEGG: hypothetical protein YP_008520731.1 PFAM: YhhN family protein; KEGG: hypothetical protein YP_008520732.1 TIGRFAM: heavy metal translocating P-type ATPase, ATPase, P-type (transporting), HAD superfamily, subfamily IC; KEGG: zntA, zinc/cadmium/mercury/lead-transporting ATPase; PFAM: E1-E2 ATPase-associated domain protein, Heavy metal transport/detoxification protein, Haloacid dehalogenase domain protein hydrolase YP_008520733.1 KEGG: SirA family protein; HAMAP : Sulfurtransferase tusA; PFAM: SirA-like domain-containing protein YP_008520734.1 KEGG: hypothetical protein; TIGRFAM: protein of unknown function DUF165; PFAM: protein of unknown function DUF165 YP_008520735.1 KEGG: hypothetical protein YP_008520736.1 PFAM: major facilitator superfamily MFS_1; KEGG: hypothetical protein YP_008520737.1 KEGG: ribonuclease; TIGRFAM: ribonuclease; PFAM: Ribonuclease BN YP_008520738.1 KEGG: 4-oxalocrotonate tautomerase family protein; TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-oxalocrotonate tautomerase YP_008520739.1 KEGG: PfkB domain-containing protein; PFAM: PfkB domain protein YP_008520740.1 PFAM: peptidase M16 domain protein; KEGG: yhjJ, zinc-dependent peptidase YP_008520741.1 KEGG: C4-dicarboxylate transporter DctA; HAMAP : C4-dicarboxylate transport protein; PFAM: sodium:dicarboxylate symporter YP_008520743.1 PFAM: glycoside hydrolase family 8; KEGG: cellulase YP_008520744.1 PFAM: Cellulose synthase subunit D, bacterial; KEGG: bcsD, hypothetical protein YP_008520745.1 PFAM: cellulose synthase operon C domain protein; KEGG: cellulose synthase operon c domain-containing protein YP_008520746.1 PFAM: Cellulose synthase BcsB; KEGG: cellulose synthase BcsB YP_008520747.1 KEGG: cellulose synthase catalytic subunit; TIGRFAM: cellulose synthase catalytic subunit (UDP-forming); PFAM: type IV pilus assembly PilZ YP_008520748.1 KEGG: yhjQ, chromosome (plasmid) partitioning protein ParA; TIGRFAM: cellulose synthase operon protein YhjQ; PFAM: Cellulose synthase operon protein YhjQ YP_008520749.1 KEGG: hypothetical protein YP_008520750.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: eamA, amino acid metabolite efflux pump YP_008520751.1 SMART: AAA ATPase; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: dppF, dipeptide transporter ATP-binding subunit; PFAM: ABC transporter related protein, Oligopeptide/dipeptide ABC transporter domain protein YP_008520752.1 SMART: AAA ATPase; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: peptide ABC transporter ATPase; PFAM: Oligopeptide/dipeptide ABC transporter domain protein, ABC transporter related protein YP_008520753.1 PFAM: ABC-type transporter, integral membrane subunit, Oligopeptide transport permease C-like, N-terminal domain; KEGG: binding-protein-dependent transporter inner membrane component YP_008520754.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transporter inner membrane component YP_008520755.1 PFAM: ABC-type transporter, periplasmic subunit; KEGG: family 5 extracellular solute-binding protein YP_008520756.1 PFAM: Citrate carrier protein; KEGG: maeN, malate Na(+) symporter YP_008520757.1 TIGRFAM: KpsF/GutQ family protein; KEGG: gutQ, D-arabinose 5-phosphate isomerase; PFAM: sugar isomerase (SIS), CBS domain containing protein YP_008520758.1 KEGG: srlR, DNA-binding transcriptional repressor SrlR; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_008520759.1 PFAM: Glucitol operon activator; KEGG: glucitol operon activator YP_008520760.1 KEGG: sorbitol-6-phosphate dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR YP_008520761.1 PFAM: PTS system glucitol/sorbitol-specific IIA component; KEGG: PTS system glucitol/sorbitol-specific transporter subunit IIA YP_008520762.1 TIGRFAM: PTS system, glucitol/sorbitol-specific, IIBC subunit; KEGG: PTS system glucitol/sorbitol-specific transporter subunit IIBC; PFAM: Sorbitol phosphotransferase protein II domain-containing protein YP_008520763.1 KEGG: srlA, glucitol/sorbitol-specific enzyme IIC component of PTS; TIGRFAM: PTS system, glucitol/sorbitol-specific, IIC subunit; PFAM: PTS system protein II sorbitol-specific factor YP_008520764.1 TIGRFAM: transaldolase; KEGG: fructose-6-phosphate aldolase; PFAM: Transaldolase YP_008520765.1 KEGG: response regulator receiver; PFAM: response regulator receiver; SMART: response regulator receiver YP_008520766.1 KEGG: sensory histidine kinase DcuS; PFAM: ATP-binding region ATPase domain protein, PAS fold domain protein; SMART: ATP-binding region ATPase domain protein YP_008520767.1 KEGG: hypothetical protein; TIGRFAM: YidE/YbjL duplication; PFAM: YidE/YbjL duplication domain-containing protein, TrkA-C domain protein YP_008520768.1 PFAM: heat shock protein Hsp20; KEGG: heat shock protein Hsp20 YP_008520769.1 PFAM: heat shock protein Hsp20; KEGG: ibpA, heat shock chaperone YP_008520770.1 PFAM: protein of unknown function DUF1375; KEGG: hypothetical protein YP_008520771.1 KEGG: LacI family transcriptional regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator, regulatory protein LacI; SMART: regulatory protein LacI YP_008520772.1 PFAM: protein of unknown function DUF112 transmembrane; KEGG: hypothetical protein YP_008520773.1 KEGG: hypothetical protein YP_008520774.1 KEGG: hypothetical protein YP_008520775.1 KEGG: hypothetical protein YP_008520776.1 PFAM: dihydrodipicolinate synthetase; KEGG: dihydrodipicolinate synthase YP_008520777.1 KEGG: L-fucose isomerase YP_008520778.1 TIGRFAM: FGGY-family pentulose kinase; KEGG: FGGY-family pentulose kinase; PFAM: Carbohydrate kinase, FGGY YP_008520779.1 PFAM: protein of unknown function DUF1471; KEGG: hypothetical protein YP_008520780.1 KEGG: transcriptional regulator; PFAM: regulatory protein LacI; SMART: regulatory protein LacI YP_008520781.1 PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit; KEGG: phosphotransferase system cellobiose-specific component IIA YP_008520782.1 KEGG: beta-glucosidase; PFAM: glycoside hydrolase family 1 YP_008520783.1 TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; KEGG: PTS system lactose/cellobiose family transporter subunit IIC; PFAM: phosphotransferase system EIIC YP_008520784.1 PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: PTS system lactose/cellobiose-specific transporter subunit IIB YP_008520785.1 KEGG: GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH, GntR domain protein; SMART: regulatory protein GntR HTH, GntR domain protein YP_008520786.1 PFAM: Mannonate dehydratase; TIGRFAM: mannonate dehydratase; HAMAP : Mannonate dehydratase; KEGG: mannonate dehydratase YP_008520787.1 KEGG: sugar phosphatase; TIGRFAM: Cof-like hydrolase, HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3 YP_008520788.1 KEGG: methyl-accepting chemotaxis sensory transducer with Cache sensor; PFAM: chemotaxis sensory transducer, Cache domain protein; SMART: chemotaxis sensory transducer YP_008520789.1 PFAM: major facilitator superfamily MFS_1; KEGG: Fosmidomycin resistance protein YP_008520790.1 KEGG: gyrB, DNA gyrase subunit B; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein, TOPRIM domain-containing protein, ATP-binding region ATPase domain protein, DNA gyrase subunit B domain protein; TIGRFAM: DNA gyrase, B subunit; HAMAP : DNA gyrase B subunit; SMART: DNA topoisomerase II, ATP-binding region ATPase domain protein YP_008520791.1 TIGRFAM: DNA replication and repair protein RecF; HAMAP : DNA replication and repair protein recF; KEGG: recF, recombination protein F; PFAM: SMC domain protein YP_008520792.1 SMART: DNA polymerase III beta chain; TIGRFAM: DNA polymerase III, beta subunit; KEGG: DNA polymerase III subunit beta; PFAM: DNA polymerase III, beta chain, C-terminal, DNA polymerase III, beta chain, central, DNA polymerase III, beta chain, N-terminal YP_008520793.1 SMART: Chromosomal replication initiator DnaA domain-containing protein, AAA ATPase; TIGRFAM: chromosomal replication initiator protein DnaA; KEGG: chromosomal replication initiator protein DnaA; HAMAP : Chromosomal replication initiator protein dnaA; PFAM: Chromosomal replication initiator DnaA, Chromosomal replication initiator DnaA domain-containing protein, DnaA N-terminal domain YP_008520794.1 TIGRFAM: ribosomal protein L34; HAMAP : 50S ribosomal protein L34; KEGG: rpmH, 50S ribosomal protein L34; PFAM: ribosomal protein L34 YP_008520795.1 TIGRFAM: ribonuclease P protein component; HAMAP : Ribonuclease P protein component; KEGG: rnpA, protein C5 component of RNase P; PFAM: ribonuclease P protein YP_008520796.1 TIGRFAM: protein of unknown function DUF37; HAMAP : UPF0161 protein yidD; KEGG: hypothetical protein; PFAM: protein of unknown function DUF37 YP_008520797.1 TIGRFAM: membrane protein insertase, YidC/Oxa1 family domain containing, membrane protein insertase, YidC/Oxa1 family; HAMAP : Membrane protein oxaA; KEGG: yidC, insertase; PFAM: 60 kDa inner membrane insertion protein YP_008520798.1 TIGRFAM: tRNA modification GTPase TrmE, small GTP-binding protein; HAMAP : tRNA modification GTPase mnmE; KEGG: trmE, tRNA modification GTPase TrmE; PFAM: GTP-binding protein TrmE, tRNA modification GTPase MnmE C-terminal domain, GTP1/OBG protein YP_008520799.1 PFAM: NIPSNAP family containing protein; KEGG: NIPSNAP family containing protein YP_008520800.1 KEGG: hipB, HipB protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_008520802.1 KEGG: RNA polymerase; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2, sigma-70 region 2 domain protein YP_008520803.1 KEGG: hypothetical protein YP_008520804.1 KEGG: thiol-disulfide isomerase and thioredoxins family protein; TIGRFAM: redox-active disulfide protein 2; PFAM: Thioredoxin-like fold-containing protein YP_008520805.1 PFAM: Protein of unknown function DUF318, transmembrane; KEGG: permease YP_008520806.1 KEGG: sigma-70 factor region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein, Sigma-70 region 4 type 2 YP_008520807.1 PFAM: ABC-type transporter, periplasmic subunit; KEGG: ABC transporter substrate-binding protein YP_008520808.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: dppB, ABC transporter permease YP_008520809.1 PFAM: ABC-type transporter, integral membrane subunit, Oligopeptide transport permease C-like, N-terminal domain; KEGG: binding-protein-dependent transporter inner membrane component YP_008520810.1 PFAM: ABC transporter related protein; KEGG: dipeptide transport ATP-binding protein DppD; SMART: AAA ATPase YP_008520811.1 PFAM: ABC transporter related protein; KEGG: dppf1, ABC transporter ATP-binding protein; SMART: AAA ATPase YP_008520813.1 KEGG: hypothetical protein; HAMAP : 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; PFAM: protein of unknown function DUF6 transmembrane YP_008520814.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: inner membrane protein YP_008520815.1 KEGG: glycosyl transferase family 39; HAMAP : Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase; PFAM: glycosyl transferase family 39 YP_008520816.1 KEGG: yfbH, undecaprenyl phosphate-alpha-L-Ara4FN (4-deoxy-4-formamido-L-arabinose) deformylase; HAMAP : 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD; PFAM: polysaccharide deacetylase YP_008520817.1 HAMAP : Bifunctional polymyxin resistance protein ArnA; KEGG: NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase, formyl transferase domain protein YP_008520818.1 KEGG: family 2 glycosyl transferase; HAMAP : Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase; PFAM: glycosyl transferase family 2 YP_008520819.1 HAMAP : UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; KEGG: DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase YP_008520820.1 PFAM: protein of unknown function DUF799; KEGG: hypothetical protein YP_008520821.1 KEGG: putative lipoprotein YP_008520822.1 PFAM: Curli production assembly/transport component CsgG; KEGG: curli production assembly/transport component CsgG YP_008520823.1 TIGRFAM: glutamate synthase, small subunit; KEGG: protein aegA; PFAM: 4Fe-4S ferredoxin, iron-sulpur binding domain-containing protein, Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YP_008520824.1 KEGG: yieE, phosphopantetheinyl transferase YP_008520825.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: Xanthine/uracil/vitamin C permease YP_008520826.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; KEGG: HAD-superfamily hydrolase YP_008520827.1 KEGG: AsnC family transcriptional regulator; PFAM: Transcription regulator, AsnC-type; SMART: Transcription regulator, AsnC-type YP_008520828.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; TIGRFAM: 1-aminocyclopropane-1-carboxylate deaminase; HAMAP : 1-aminocyclopropane-1-carboxylate deaminase; KEGG: 1-aminocyclopropane-1-carboxylate deaminase YP_008520829.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: LysR family transcriptional regulator YP_008520830.1 PFAM: peptidase M20; KEGG: hypothetical protein YP_008520831.1 PFAM: ABC transporter related protein, Oligopeptide/dipeptide ABC transporter domain protein; KEGG: ABC transporter; SMART: AAA ATPase YP_008520832.1 SMART: AAA ATPase; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: peptide ABC transporter ATPase; PFAM: ABC transporter related protein, Oligopeptide/dipeptide ABC transporter domain protein YP_008520833.1 PFAM: ABC-type transporter, integral membrane subunit, Oligopeptide transport permease C-like, N-terminal domain; KEGG: binding-protein-dependent transporters inner membrane component YP_008520834.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transporters inner membrane component YP_008520835.1 PFAM: ABC-type transporter, periplasmic subunit; KEGG: ABC transporter substrate-binding protein YP_008520836.1 KEGG: NodT family RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_008520837.1 KEGG: acrB, acriflavine resistance protein B; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein YP_008520838.1 KEGG: acrA, acriflavine resistance protein A; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_008520839.1 PFAM: regulatory protein TetR; KEGG: hypothetical protein YP_008520841.1 PFAM: regulatory protein TetR; KEGG: HTH-type transcriptional regulator YP_008520842.1 KEGG: phosphate uptake regulator PhoU; TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU domain YP_008520843.1 SMART: AAA ATPase; TIGRFAM: phosphate ABC transporter, ATPase subunit; KEGG: pstB, phosphate transporter ATP-binding protein; PFAM: ABC transporter related protein YP_008520844.1 KEGG: phosphate ABC transporter permease; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: ABC-type transporter, integral membrane subunit YP_008520845.1 KEGG: pstC, phosphate transporter permease subunit PstC; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: ABC-type transporter, integral membrane subunit YP_008520846.1 KEGG: phosphate ABC transporter substrate-binding protein; TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: PBP domain YP_008520847.1 PFAM: Beta-ketoacyl synthase; KEGG: 3-oxoacyl-(acyl carrier protein) synthase II; SMART: Polyketide synthase, beta-ketoacyl synthase region-containing protein YP_008520848.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; KEGG: fabG, 3-ketoacyl-ACP reductase; PFAM: short-chain dehydrogenase/reductase SDR YP_008520849.1 PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: beta-hydroxydecanoyl-ACP dehydrase YP_008520850.1 PFAM: Beta-ketoacyl synthase; KEGG: 3-oxoacyl-ACP synthase; SMART: Polyketide synthase, beta-ketoacyl synthase region-containing protein YP_008520851.1 PFAM: Protein of unknown function DUF3261; KEGG: lipoprotein YP_008520852.1 PFAM: MMPL domain protein; KEGG: hypothetical protein YP_008520853.1 PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: outer membrane lipoprotein carrier protein LolA YP_008520854.1 KEGG: thioesterase superfamily protein YP_008520855.1 PFAM: glycosyl transferase family 2; KEGG: glycosyl transferase family protein YP_008520856.1 PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: 3-hydroxyacyl-ACP dehydratase YP_008520857.1 PFAM: AMP-dependent synthetase and ligase; KEGG: AMP-binding protein YP_008520858.1 KEGG: hypothetical protein YP_008520859.1 KEGG: acyl carrier protein; HAMAP : Acyl carrier protein; PFAM: acyl carrier protein familyprotein YP_008520860.1 PFAM: acyl carrier protein familyprotein; KEGG: acyl carrier protein YP_008520861.1 KEGG: phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase YP_008520862.1 KEGG: hypothetical protein YP_008520863.1 PFAM: O-methyltransferase family 2; KEGG: O-methyltransferase family 2 YP_008520864.1 KEGG: hypothetical protein YP_008520866.1 PFAM: sugar isomerase (SIS), glutamine amidotransferase class-II; TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; HAMAP : Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; KEGG: glucosamine/fructose-6-phosphate aminotransferase, isomerizing YP_008520867.1 PFAM: MobA-like NTP transferase domain, transferase hexapeptide repeat containing protein; TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; HAMAP : Bifunctional protein glmU; KEGG: glmU, bifunctional N-acetyl glucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyl transferase YP_008520868.1 KEGG: exopolygalacturonate lyase YP_008520869.1 TIGRFAM: ATP synthase F1, epsilon subunit; HAMAP : ATP synthase epsilon chain; KEGG: atpC, F1 sector of membrane-bound ATP synthase subunit epsilon; PFAM: ATPase, F1 complex, delta/epsilon subunit YP_008520870.1 SMART: AAA ATPase; TIGRFAM: ATP synthase F1, beta subunit; KEGG: ATP synthase F1 subunit beta; HAMAP : ATP synthase subunit beta; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region, H+transporting two-sector ATPase alpha/beta subunit domain protein YP_008520871.1 TIGRFAM: ATP synthase F1, gamma subunit; HAMAP : ATP synthase gamma chain; KEGG: ATP synthase F1 subunit gamma; PFAM: H+transporting two-sector ATPase gamma subunit YP_008520872.1 TIGRFAM: ATP synthase F1, alpha subunit; HAMAP : ATP synthase subunit alpha; KEGG: atpA, F1 sector of membrane-bound ATP synthase subunit alpha; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region, H+transporting two-sector ATPase alpha/beta subunit domain protein YP_008520873.1 TIGRFAM: ATP synthase F1, delta subunit; HAMAP : ATP synthase subunit delta; KEGG: F0F1 ATP synthase subunit delta; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit YP_008520874.1 TIGRFAM: ATP synthase F0, B subunit; HAMAP : ATP synthase subunit b; KEGG: ATP synthase F0 subunit B; PFAM: H+transporting two-sector ATPase B/B' subunit YP_008520875.1 TIGRFAM: ATP synthase F0, C subunit; HAMAP : ATP synthase subunit c; KEGG: F0F1 ATP synthase subunit C; PFAM: H+transporting two-sector ATPase C subunit YP_008520876.1 TIGRFAM: ATP synthase F0, A subunit; HAMAP : ATP synthase subunit a; KEGG: ATP synthase F0 subunit alpha; PFAM: H+transporting two-sector ATPase A subunit YP_008520877.1 PFAM: ATP synthase I chain; KEGG: F0F1 ATP synthase subunit I YP_008520878.1 TIGRFAM: methyltransferase GidB; HAMAP : Ribosomal RNA small subunit methyltransferase G; KEGG: methyltransferase GidB; PFAM: glucose inhibited division protein YP_008520879.1 TIGRFAM: glucose inhibited division protein A; HAMAP : tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG; KEGG: gidA, tRNA uridine 5-carboxymethylaminomethyl modification protein GidA; PFAM: glucose-inhibited division protein A, GidA associated domain 3 YP_008520880.1 PFAM: flavodoxin/nitric oxide synthase; KEGG: mioC, flavodoxin YP_008520881.1 KEGG: AsnC family transcriptional regulator; PFAM: Transcription regulator, AsnC-type; SMART: Transcription regulator, AsnC-type YP_008520882.1 HAMAP : Protein viaA; PFAM: VWA containing CoxE family protein; KEGG: VWA containing CoxE family protein; SMART: von Willebrand factor type A YP_008520883.1 KEGG: ATPase associated with various cellular activities AAA_5; PFAM: ATPase associated with various cellular activities AAA_5, ATPase, RavA, C-terminal; SMART: AAA ATPase YP_008520884.1 TIGRFAM: potassium uptake protein; HAMAP : Low affinity potassium transport system protein kup; KEGG: trkD, potassium transporter Kup; PFAM: potassium transporter YP_008520885.1 KEGG: rbsD, sugar ABC transporter; HAMAP : D-ribose pyranase; PFAM: RbsD or FucU transport YP_008520886.1 PFAM: ABC transporter related protein; KEGG: rbsA, D-ribose ABC transporter ATP-binding protein; SMART: AAA ATPase YP_008520887.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: ribose ABC transporter permease YP_008520888.1 PFAM: Periplasmic binding protein domain; KEGG: periplasmic-binding protein/LacI transcriptional regulator YP_008520889.1 TIGRFAM: ribokinase; KEGG: rbsK, ribokinase; PFAM: PfkB domain protein YP_008520890.1 KEGG: rbsR, ribose operon repressor; PFAM: regulatory protein LacI; SMART: regulatory protein LacI YP_008520891.1 TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; KEGG: mobB, molybdopterin-guanine dinucleotide biosynthesis protein B YP_008520892.1 TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein A; HAMAP : Molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: molybdopterin-guanine dinucleotide biosynthesis protein A; PFAM: MobA-like NTP transferase domain YP_008520893.1 PFAM: protein of unknown function DUF1040; KEGG: hypothetical protein YP_008520894.1 PFAM: aminoglycoside phosphotransferase; KEGG: aminoglycoside phosphotransferase YP_008520895.1 PFAM: DSBA oxidoreductase; KEGG: protein disulfide isomerase I YP_008520896.1 TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase, 5'-3' exonuclease, resolvase-like domain-containing protein, 5'-3' exonuclease, subdomain-containing protein, 3'-5' exonuclease; KEGG: DNA polymerase I; SMART: 5'-3' exonuclease, 3'-5' exonuclease, Helix-hairpin-helix domain protein class 2, DNA-directed DNA polymerase YP_008520897.1 TIGRFAM: ribosome biogenesis GTP-binding protein YsxC; HAMAP : GTP-binding protein engB; KEGG: engB, ribosome biogenesis GTP-binding protein YsxC; PFAM: GTP1/OBG protein YP_008520898.1 KEGG: hypothetical protein; HAMAP : UPF0241 protein yihI; PFAM: protein of unknown function DUF414 YP_008520899.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; KEGG: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein, HemN domain protein YP_008520900.1 KEGG: hypothetical protein YP_008520901.1 TIGRFAM: nitrogen regulation protein NR(I); PFAM: sigma-54 factor interaction domain-containing protein, helix-turn-helix Fis-type, response regulator receiver; KEGG: glnG, nitrogen regulation protein NR(I); SMART: response regulator receiver, AAA ATPase YP_008520902.1 KEGG: glnL, nitrogen regulation protein NR(II); PFAM: ATP-binding region ATPase domain protein, histidine kinase A domain protein, PAS fold domain protein; SMART: ATP-binding region ATPase domain protein, PAS domain containing protein, histidine kinase A domain protein YP_008520903.1 KEGG: glnA, glutamine synthetase; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region, glutamine synthetase beta-Grasp YP_008520904.1 KEGG: GTP-binding protein TypA; TIGRFAM: GTP-binding protein TypA, small GTP-binding protein; PFAM: protein synthesis factor GTP-binding protein, elongation factor G domain-containing protein, elongation factor Tu domain 2 protein YP_008520905.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; KEGG: phosphatase YP_008520906.1 TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; HAMAP : D-tyrosyl-tRNA(Tyr) deacylase; KEGG: D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase YP_008520907.1 KEGG: yiiD, acetyltransferase; TIGRFAM: thioesterase domain protein; PFAM: Thioesterase putative, GCN5-related N-acetyltransferase YP_008520908.1 PFAM: AsmA family protein; KEGG: AsmA family protein YP_008520909.1 KEGG: uracil-xanthine permease; TIGRFAM: uracil-xanthine permease, xanthine permease; PFAM: Xanthine/uracil/vitamin C permease YP_008520910.1 TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein, helicase domain-containing protein, nucleic acid binding OB-fold tRNA/helicase-type; KEGG: ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase , helicase domain-containing protein YP_008520911.1 PFAM: RNA methyltransferase, SpoU/TrmH type, C-terminal; KEGG: trmH, tRNA (Guanosine-2'-O-)-methyltransferase YP_008520912.1 SMART: RelA/SpoT domain protein, metal-dependent phosphohydrolase HD region; TIGRFAM: RelA/SpoT family protein; KEGG: bifunctional (p)ppGpp synthetase II/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase; PFAM: RelA/SpoT domain protein, TGS domain-containing protein YP_008520913.1 TIGRFAM: DNA-directed RNA polymerase, omega subunit; HAMAP : DNA-directed RNA polymerase subunit omega; KEGG: rpoZ, putative DNA-directed RNA polymerase, subunit K/omega; PFAM: RNA polymerase Rpb6 YP_008520914.1 KEGG: gmk, guanylate kinase; PFAM: guanylate kinase; TIGRFAM: guanylate kinase; HAMAP : Guanylate kinase; SMART: guanylate kinase/L-type calcium channel region YP_008520915.1 SMART: NAD-dependent DNA ligase; HAMAP : DNA ligase B; KEGG: yicF, DNA ligase; PFAM: NAD-dependent DNA ligase adenylation, NAD-dependent DNA ligase OB-fold-containing protein YP_008520916.1 KEGG: hypothetical protein YP_008520917.1 PFAM: Tetratricopeptide TPR_2 repeat-containing protein; KEGG: hypothetical protein YP_008520918.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: short-chain dehydrogenase/reductase SDR YP_008520919.1 KEGG: long-chain acyl-CoA synthetase YP_008520920.1 KEGG: AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase YP_008520921.1 PFAM: Thermostable hemolysin; KEGG: hypothetical protein YP_008520922.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: LysR family transcriptional regulator YP_008520923.1 PFAM: major facilitator superfamily MFS_1; KEGG: transporter YP_008520924.1 KEGG: histidine acid phosphatase; PFAM: histidine acid phosphatase YP_008520925.1 KEGG: hypothetical protein YP_008520926.1 KEGG: Protein-disulfide reductase YP_008520927.1 KEGG: scsC, Secreted protein, suppressor for copper-sensitivity C YP_008520928.1 KEGG: NmrA family protein YP_008520930.1 KEGG: hypothetical protein YP_008520931.1 KEGG: major facilitator family transporter YP_008520932.1 KEGG: major facilitator family transporter YP_008520933.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: hypothetical protein YP_008520934.1 KEGG: AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC domain-containing protein, AraC protein arabinose-binding/dimerization; SMART: Helix-turn-helix, AraC domain-containing protein YP_008520935.1 KEGG: hypothetical protein; TIGRFAM: HI0933 family protein; PFAM: HI0933 family protein YP_008520936.1 PFAM: phosphate transporter; KEGG: phosphate transporter YP_008520937.1 KEGG: uspB, universal stress protein UspB; HAMAP : Universal stress protein B; PFAM: Universal stress protein B YP_008520938.1 PFAM: UspA domain-containing protein; KEGG: UspA domain-containing protein YP_008520939.1 PFAM: Lyase 1, N-terminal; TIGRFAM: argininosuccinate lyase; HAMAP : Argininosuccinate lyase; KEGG: argH, argininosuccinate lyase YP_008520940.1 PFAM: aspartate/glutamate/uridylate kinase; TIGRFAM: acetylglutamate kinase; HAMAP : Acetylglutamate kinase; KEGG: acetylglutamate kinase YP_008520941.1 KEGG: argC, N-acetyl-gamma-glutamylphosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding protein, Semialdehyde dehydrogenase dimerization region; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; HAMAP : N-acetyl-gamma-glutamyl-phosphate reductase; SMART: Semialdehyde dehydrogenase NAD - binding protein YP_008520942.1 PFAM: peptidase M20, peptidase dimerization domain protein; TIGRFAM: acetylornithine deacetylase (ArgE); HAMAP : Acetylornithine deacetylase; KEGG: argE, acetylornithine deacetylase YP_008520943.1 HAMAP : Phosphoenolpyruvate carboxylase; KEGG: phosphoenolpyruvate carboxylase; PFAM: Phosphoenolpyruvate carboxylase YP_008520944.1 PFAM: carbon starvation protein CstA, CstA C-terminal domain; KEGG: Carbon starvation protein A YP_008520945.1 PFAM: Tyrosine/serine-protein phosphatase IphP-type, Tyrosine-protein phosphatase family, C-terminal domain; KEGG: hypothetical protein YP_008520946.1 TIGRFAM: uridine phosphorylase; KEGG: uridine phosphorylase; PFAM: purine or other phosphorylase family 1 YP_008520947.1 KEGG: carboxymethylenebutenolidase; PFAM: dienelactone hydrolase YP_008520948.1 KEGG: hypothetical protein YP_008520949.1 KEGG: Cobalamin synthesis protein/P47K family protein; PFAM: cobalamin synthesis protein P47K, cobalamin synthesis CobW domain protein; SMART: cobalamin synthesis CobW domain protein YP_008520950.1 KEGG: hypothetical protein YP_008520951.1 KEGG: 3-oxoacyl-ACP reductase; PFAM: short-chain dehydrogenase/reductase SDR YP_008520952.1 KEGG: glucose 1-dehydrogenase; SMART: Polyketide synthase/Fatty acid synthase, KR YP_008520953.1 PFAM: major facilitator superfamily MFS_1; KEGG: sugar transporter YP_008520954.1 PFAM: polysaccharide deacetylase; KEGG: polysaccharide deacetylase YP_008520955.1 PFAM: Amidase; KEGG: amidase family protein YP_008520956.1 KEGG: GntR family transcriptional regulator; PFAM: GntR domain protein, regulatory protein GntR HTH; SMART: GntR domain protein, regulatory protein GntR HTH YP_008520957.1 PFAM: Methionine synthase vitamin-B12 independent, Cobalamin-independent synthase MetE domain protein; TIGRFAM: 5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase; HAMAP : 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; KEGG: metE, 5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase YP_008520958.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: LysR family transcriptional regulator YP_008520959.1 KEGG: carboxylate/amino acid/amine transporter; TIGRFAM: carboxylate/amino acid/amine transporter; PFAM: protein of unknown function DUF6 transmembrane YP_008520960.1 SMART: serine acetyltransferase domain protein; TIGRFAM: serine O-acetyltransferase; KEGG: serine O-acetyltransferase; PFAM: serine acetyltransferase domain protein, transferase hexapeptide repeat containing protein YP_008520961.1 KEGG: glycerol-3-phosphate dehydrogenase (NAD(P)(+)); HAMAP : Glycerol-3-phosphate dehydrogenase [NAD(P)+]; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein YP_008520962.1 TIGRFAM: protein-export protein SecB; HAMAP : Protein-export protein secB; KEGG: protein-export protein SecB; PFAM: protein export chaperone SecB YP_008520963.1 KEGG: Rhodanese domain-containing protein; PFAM: Rhodanese-like protein; SMART: Rhodanese-like protein YP_008520964.1 PFAM: Peptidase M23; KEGG: hypothetical protein YP_008520965.1 PFAM: protein of unknown function DUF610 YibQ; KEGG: hypothetical protein YP_008520966.1 KEGG: L-threonine 3-dehydrogenase; PFAM: Alcohol dehydrogenase GroES domain protein, Alcohol dehydrogenase zinc-binding domain protein; TIGRFAM: L-threonine 3-dehydrogenase; HAMAP : L-threonine 3-dehydrogenase; SMART: Polyketide synthase, enoylreductase YP_008520967.1 TIGRFAM: 2-amino-3-ketobutyrate coenzyme A ligase; KEGG: 2-amino-3-ketobutyrate CoA ligase; PFAM: aminotransferase class I and II YP_008520968.1 PFAM: NAD-dependent epimerase/dehydratase; TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; HAMAP : ADP-L-glycero-D-manno-heptose-6-epimerase; KEGG: rfaD, ADP-L-glycero-D-manno-heptose-6-epimerase YP_008520969.1 KEGG: rfaF, ADP-heptose--LPS heptosyltransferase; TIGRFAM: lipopolysaccharide heptosyltransferase II; PFAM: glycosyl transferase family 9 YP_008520970.1 KEGG: ADP-heptose:LPS heptosyl transferase I; TIGRFAM: lipopolysaccharide heptosyltransferase I; PFAM: glycosyl transferase family 9 YP_008520971.1 KEGG: lipopolysaccharide heptosyltransferase III; TIGRFAM: lipopolysaccharide heptosyltransferase III; PFAM: glycosyl transferase family 9 YP_008520972.1 PFAM: glycosyl transferase group 1; KEGG: glycosyl transferase group 1 YP_008520973.1 KEGG: O-antigen polymerase YP_008520974.1 PFAM: glycosyl transferase family 9; KEGG: ADP-heptose--lipooligosaccharide heptosyltransferase II YP_008520975.1 PFAM: glycosyl transferase group 1; KEGG: group 1 glycosyl transferase YP_008520976.1 PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein, glycosyl transferase group 1; KEGG: kdtA, 3-deoxy-D-manno-octulosonic-acid transferase YP_008520977.1 PFAM: glycosyl transferase family 2; KEGG: glycosyl transferase family 2 YP_008520978.1 PFAM: cytidylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase, cytidyltransferase-related domain protein; HAMAP : Phosphopantetheine adenylyltransferase; KEGG: coaD, phosphopantetheine adenylyltransferase YP_008520979.1 KEGG: mutM, formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase; PFAM: Formamidopyrimidine-DNA glycosylase catalytic domain protein, DNA glycosylase/AP lyase, H2TH DNA-binding protein; TIGRFAM: formamidopyrimidine-DNA glycosylase; HAMAP : Formamidopyrimidine-DNA glycosylase; SMART: Formamidopyrimidine-DNA glycosylase catalytic domain protein YP_008520980.1 TIGRFAM: ribosomal protein L33; HAMAP : 50S ribosomal protein L33; KEGG: 50S ribosomal protein L33; PFAM: ribosomal protein L33 YP_008520981.1 TIGRFAM: ribosomal protein L28; HAMAP : 50S ribosomal protein L28; KEGG: rpmB, 50S ribosomal protein L28; PFAM: ribosomal protein L28 YP_008520982.1 TIGRFAM: DNA repair protein RadC; HAMAP : UPF0758 protein yicR; KEGG: yicR, DNA repair protein; PFAM: RadC-like JAB domain YP_008520983.1 PFAM: Protein of unknown function DUF2202; KEGG: hypothetical protein YP_008520984.1 TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; KEGG: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: DNA/pantothenate metabolism flavoprotein domain protein, flavoprotein YP_008520985.1 PFAM: deoxyUTP pyrophosphatase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; HAMAP : Deoxyuridine 5'-triphosphate nucleotidohydrolase; KEGG: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut YP_008520986.1 KEGG: slmA, nucleoid occlusion protein; HAMAP : HTH-type protein slmA; PFAM: regulatory protein TetR YP_008520987.1 PFAM: phosphoribosyltransferase; TIGRFAM: orotate phosphoribosyltransferase; HAMAP : Orotate phosphoribosyltransferase; KEGG: orotate phosphoribosyltransferase YP_008520988.1 PFAM: 3' exoribonuclease, Exoribonuclease, phosphorolytic domain 2; TIGRFAM: ribonuclease PH; HAMAP : Ribonuclease PH; KEGG: rph, ribonuclease PH YP_008520989.1 PFAM: protein of unknown function DUF202; KEGG: hypothetical protein YP_008520990.1 PFAM: protein of unknown function DUF202; KEGG: hypothetical protein YP_008520991.1 PFAM: protein of unknown function DUF1611; KEGG: EBNA-1 nuclear protein YP_008520992.1 KEGG: mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing protein; SMART: Mandelate racemase/muconate lactonizing protein YP_008520993.1 PFAM: ABC transporter related protein, Oligopeptide/dipeptide ABC transporter domain protein; KEGG: ABC transporter; SMART: AAA ATPase YP_008520994.1 PFAM: ABC-type transporter, periplasmic subunit; KEGG: extracellular solute-binding protein family 5 YP_008520995.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transporter inner membrane component YP_008520996.1 PFAM: ABC-type transporter, integral membrane subunit, Oligopeptide transport permease C-like, N-terminal domain; KEGG: binding-protein-dependent transport systems inner membrane component YP_008520997.1 PFAM: peptidase S58 DmpA; KEGG: D-aminopeptidease YP_008520998.1 PFAM: peptidase M55 D-aminopeptidase; KEGG: peptidase M55 D-aminopeptidase YP_008520999.1 KEGG: peptidase T2 asparaginase 2; PFAM: peptidase T2 asparaginase 2 YP_008521000.1 KEGG: methyltransferase; HAMAP : UPF0341 protein yhiQ; PFAM: protein of unknown function DUF548 YP_008521001.1 KEGG: oligopeptidase A; PFAM: peptidase M3A and M3B thimet/oligopeptidase F YP_008521002.1 PFAM: protein of unknown function DUF519; KEGG: hypothetical protein YP_008521003.1 TIGRFAM: glutathione-disulfide reductase; KEGG: gor, glutathione reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain, pyridine nucleotide-disulfide oxidoreductase dimerization region, FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_008521004.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: efflux protein, LysE family YP_008521005.1 PFAM: protein of unknown function YqcI/YcgG; KEGG: hypothetical protein YP_008521006.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: LysR family transcriptional regulator YP_008521007.1 PFAM: protein of unknown function DUF161; KEGG: membrane protein YP_008521008.1 PFAM: PTS system Galactitol-specific IIC component; KEGG: Putative integral membrane protein YP_008521009.1 PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: FIG01225319: hypothetical protein YP_008521010.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: PTS family membrane transport protein, component IICD YP_008521011.1 KEGG: Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; SMART: regulatory protein LacI YP_008521012.1 KEGG: aminotransferase class V; PFAM: aminotransferase class V YP_008521013.1 PFAM: GCN5-related N-acetyltransferase; KEGG: histone acetyltransferase HPA2-like acetyltransferase YP_008521014.1 PFAM: Glucokinase; TIGRFAM: glucokinase; HAMAP : Glucokinase; KEGG: glk, glucokinase YP_008521015.1 KEGG: GntR family transcriptional regulator; PFAM: aminotransferase class I and II, regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_008521016.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR YP_008521017.1 KEGG: hypothetical protein; PFAM: aminotransferase class-III YP_008521018.1 PFAM: ABC transporter related protein; KEGG: ABC transporter; SMART: AAA ATPase YP_008521019.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transporters inner membrane component YP_008521020.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transporters inner membrane component YP_008521021.1 KEGG: NMT1/THI5 like domain-containing protein YP_008521022.1 PFAM: Tetracycline transcriptional regulator YcdC domain-containing protein, regulatory protein TetR; KEGG: TetR family transcriptional regulator YP_008521023.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: ABC transporter YP_008521024.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: ABC transporter YP_008521025.1 PFAM: ABC transporter related protein; KEGG: ABC transporter; SMART: AAA ATPase YP_008521026.1 PFAM: ABC-type metal ion transporter, periplasmic subunit; KEGG: periplasmic solute binding protein YP_008521027.1 KEGG: gltD, glutamate synthase subunit beta; PFAM: Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain, FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_008521028.1 TIGRFAM: dihydroorotate dehydrogenase family protein; KEGG: dihydropyrimidine dehydrogenase; PFAM: dihydroorotate oxidase, 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_008521029.1 TIGRFAM: dihydropyrimidinase; KEGG: phenylhydantoinase; PFAM: amidohydrolase YP_008521030.1 TIGRFAM: amidase, hydantoinase/carbamoylase family; KEGG: amidase; PFAM: peptidase M20, peptidase dimerization domain protein YP_008521031.1 KEGG: avtA, valine--pyruvate transaminase; PFAM: aminotransferase class I and II YP_008521032.1 KEGG: hypothetical protein YP_008521033.1 HAMAP : Glyoxylate/hydroxypyruvate reductase B; KEGG: tkrA, 2-keto-D-gluconate reductase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein, D-isomer specific 2-hydroxyacid dehydrogenase catalytic region-containing protein YP_008521034.1 PFAM: GCN5-related N-acetyltransferase; KEGG: GCN5-like N-acetyltransferase YP_008521035.1 TIGRFAM: DNA-3-methyladenine glycosylase I; KEGG: tag, DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase YP_008521036.1 PFAM: protein of unknown function DUF81; KEGG: hypothetical protein YP_008521037.1 PFAM: glycyl-tRNA synthetase alpha subunit; TIGRFAM: glycyl-tRNA synthetase, alpha subunit; HAMAP : Glycyl-tRNA synthetase alpha subunit; KEGG: glyQ, glycine tRNA synthetase subunit alpha YP_008521038.1 TIGRFAM: glycyl-tRNA synthetase, beta subunit; HAMAP : Glycyl-tRNA synthetase beta subunit; KEGG: glyS, glycine tRNA synthetase subunit beta YP_008521039.1 KEGG: hypothetical protein YP_008521040.1 PFAM: dihydrodipicolinate synthetase; KEGG: dihydrodipicolinate synthase YP_008521041.1 PFAM: Dak phosphatase; KEGG: dhaK2, dihydroxyacetone kinase, phosphatase subunit YP_008521042.1 KEGG: dhaK1, dihydroxyacetone kinase (glycerone kinase), kinase subunit; PFAM: Dak kinase YP_008521043.1 PFAM: protein of unknown function DUF112 transmembrane; KEGG: hypothetical protein YP_008521044.1 KEGG: hypothetical protein YP_008521045.1 KEGG: hypothetical protein YP_008521046.1 PFAM: PfkB domain protein, regulatory protein DeoR; KEGG: ribokinase; SMART: regulatory protein DeoR YP_008521048.1 SMART: Allophanate hydrolase subunit 2, Allophanate hydrolase subunit 1, biotin carboxylase domain protein; TIGRFAM: urea carboxylase, urea amidolyase related protein; KEGG: Urea carboxylase; PFAM: Allophanate hydrolase subunit 2, Carbamoyl-phosphate synthetase large chain domain protein, biotin carboxylase domain protein, biotin/lipoyl attachment domain-containing protein, Carbamoyl-phosphate synthase L chain ATP-binding protein, Allophanate hydrolase subunit 1 YP_008521049.1 KEGG: Urea carboxylase-related aminomethyltransferase; TIGRFAM: urea carboxylase-associated protein 1; PFAM: Domain of unknown function DUF1989-containing protein YP_008521050.1 KEGG: Urea carboxylase-related aminomethyltransferase; TIGRFAM: urea carboxylase-associated protein 2; PFAM: Domain of unknown function DUF1989-containing protein YP_008521051.1 PFAM: ABC transporter related protein; KEGG: ABC transporter; SMART: AAA ATPase YP_008521052.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transporter inner membrane component YP_008521053.1 TIGRFAM: ABC transporter periplasmic binding protein, urea carboxylase region; KEGG: ABC transporter substrate-binding protein YP_008521054.1 PFAM: Protein of unknown function DUF3053; KEGG: yiaF, hypothetical protein YP_008521055.1 KEGG: PTS system mannitol-specific transporter subunit IIC; TIGRFAM: PTS system, mannitol-specific IIC subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2, phosphotransferase system lactose/cellobiose-specific IIB subunit, phosphotransferase system EIIC YP_008521056.1 HAMAP : Mannitol-1-phosphate 5-dehydrogenase; KEGG: mtlD, mannitol-1-phosphate dehydrogenase, NAD(P)-binding protein; PFAM: Mannitol dehydrogenase domain-containing protein, Mannitol dehydrogenase rossman domain-containing protein YP_008521057.1 PFAM: Mannitol repressor; KEGG: mannitol repressor, mtlR YP_008521058.1 PFAM: Protein of unknown function DUF2810; KEGG: hypothetical protein YP_008521059.1 KEGG: methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer, histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer, histidine kinase HAMP region domain protein YP_008521061.1 PFAM: Manganese/iron superoxide dismutase; KEGG: superoxide dismutase YP_008521062.1 TIGRFAM: formate dehydrogenase family accessory protein FdhD; HAMAP : Protein fdhD; KEGG: fdhD, formate dehydrogenase formation protein; PFAM: formate dehydrogenase subunit FdhD YP_008521063.1 PFAM: Aldehyde Dehydrogenase; KEGG: aldehyde dehydrogenase YP_008521064.1 PFAM: acyltransferase 3; KEGG: hypothetical protein YP_008521065.1 KEGG: AraC family transcriptional regulator; PFAM: DJ-1 domain, InhA-type, Helix-turn-helix, AraC domain-containing protein; SMART: Helix-turn-helix, AraC domain-containing protein YP_008521066.1 PFAM: isochorismatase hydrolase; KEGG: isochorismatase hydrolase YP_008521067.1 KEGG: xylB, xylulokinase; TIGRFAM: xylulokinase; PFAM: Carbohydrate kinase, FGGY YP_008521068.1 PFAM: Xylose isomerase domain-containing protein TIM barrel; TIGRFAM: xylose isomerase; HAMAP : Xylose isomerase; KEGG: xylA, D-xylose isomerase YP_008521069.1 KEGG: D-xylose ABC transporter periplasmic substrate-binding protein; TIGRFAM: D-xylose ABC transporter, periplasmic substrate-binding protein; PFAM: Periplasmic binding protein domain YP_008521070.1 SMART: AAA ATPase; TIGRFAM: D-xylose ABC transporter, ATPase subunit; KEGG: D-xylose ABC transporter ATPase subunit; PFAM: ABC transporter related protein YP_008521071.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: sugar transport system permease YP_008521072.1 KEGG: AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC domain-containing protein; SMART: Helix-turn-helix, AraC domain-containing protein YP_008521073.1 PFAM: ThiJ/PfpI domain-containing protein; KEGG: hypothetical protein YP_008521074.1 PFAM: argininosuccinate synthase; TIGRFAM: argininosuccinate synthase; HAMAP : Argininosuccinate synthase; KEGG: argininosuccinate synthase YP_008521075.1 KEGG: AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC domain-containing protein; SMART: Helix-turn-helix, AraC domain-containing protein YP_008521077.1 PFAM: ABC transporter related protein; KEGG: ABC transporter; SMART: AAA ATPase YP_008521078.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: 4'-phosphopantetheinyl transferase YP_008521079.1 KEGG: gas vesicle structural protein; HAMAP : Gas vesicle structural protein; PFAM: gas vesicle protein GVPa YP_008521080.1 KEGG: hypothetical protein YP_008521081.1 TIGRFAM: gas vesicle protein GvpN; PFAM: ATPase associated with various cellular activities AAA_5; KEGG: gas vesicle protein GvpN; SMART: AAA ATPase YP_008521082.1 KEGG: hypothetical protein YP_008521084.1 PFAM: Gas vesicle synthesis GvpLGvpF; KEGG: gas vesicle synthesis GvpLGvpF YP_008521085.1 KEGG: hypothetical protein YP_008521086.1 TIGRFAM: arsenite-activated ATPase ArsA; KEGG: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase-like domain YP_008521087.1 PFAM: gas vesicle protein GVPa; KEGG: Gas vesicle protein YP_008521088.1 PFAM: Gas vesicle K; KEGG: gas vesicle protein K YP_008521089.1 PFAM: Tetratricopeptide repeat-containing protein; KEGG: hypothetical protein YP_008521090.1 PFAM: gas vesicle protein GVPa; KEGG: gas vesicle protein GvpA YP_008521091.1 KEGG: hypothetical protein YP_008521092.1 KEGG: Fis family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein, helix-turn-helix Fis-type, response regulator receiver; SMART: response regulator receiver, AAA ATPase YP_008521093.1 PFAM: GvpH family protein; KEGG: heat shock protein, HSP20 family protein YP_008521094.1 SMART: AAA ATPase VAT domain protein, AAA ATPase, cell division protein 48 CDC48 domain 2; TIGRFAM: AAA family ATPase, CDC48 subfamily; KEGG: ATPase AAA; PFAM: AAA ATPase central domain protein, cell division protein 48 CDC48 domain 2, AAA ATPase VAT domain protein YP_008521095.1 PFAM: Gas vesicle synthesis GvpLGvpF; KEGG: gas vesicle synthesis GvpLGvpF; overlaps another CDS with the same product name YP_008521096.1 PFAM: Gas vesicle synthesis GvpLGvpF; KEGG: Gas vesicle synthesis protein GvpL/GvpF; overlaps another CDS with the same product name YP_008521097.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, histidine kinase A domain protein, PAS fold-4 domain protein, PAS fold domain protein; KEGG: PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein, PAS domain containing protein, histidine kinase A domain protein YP_008521098.1 KEGG: response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_008521099.1 PFAM: Amidase; KEGG: amidase YP_008521100.1 KEGG: ABC transporter; PFAM: ABC transporter related protein, Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_008521101.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transporters inner membrane component YP_008521102.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transporters inner membrane component YP_008521103.1 PFAM: ABC-type transporter, periplasmic subunit; KEGG: family 5 extracellular solute-binding protein YP_008521104.1 KEGG: GntR family transcriptional regulator; PFAM: aminotransferase class I and II, regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_008521105.1 SMART: helix-turn-helix domain protein; KEGG: transcriptional regulator YP_008521106.1 KEGG: hypothetical protein YP_008521107.1 PFAM: HipA domain protein; KEGG: HipA domain-containing protein YP_008521108.1 PFAM: SEC-C motif domain protein; KEGG: hypothetical protein YP_008521109.1 KEGG: hypothetical protein YP_008521110.1 KEGG: SAM-dependent methyltransferase; PFAM: Methyltransferase type 11; SMART: regulatory protein MerR YP_008521111.1 PFAM: Domain of unknown function DUF4095; KEGG: hypothetical protein YP_008521112.1 PFAM: Domain of unknown function DUF1814; KEGG: hypothetical protein YP_008521113.1 KEGG: hypothetical protein YP_008521114.1 PFAM: HipA domain protein; KEGG: HipA domain-containing protein YP_008521115.1 PFAM: Fic/DOC N-terminal, filamentation induced by cAMP protein Fic; KEGG: filamentation induced by cAMP protein fic YP_008521116.1 PFAM: Prophage CP4-57 regulatory; KEGG: hypothetical protein YP_008521117.1 KEGG: hypothetical protein; PFAM: protein of unknown function DUF955; SMART: helix-turn-helix domain protein YP_008521118.1 KEGG: hypothetical protein YP_008521119.1 KEGG: hypothetical protein YP_008521120.1 PFAM: Domain of unknown function DUF4102, integrase family protein; KEGG: phage integrase family site specific recombinase YP_008521121.1 KEGG: hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00255; PFAM: YicC-like domain-containing protein, domain of unknown function DUF1732 YP_008521122.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: LysR family transcriptional regulator YP_008521123.1 KEGG: Membrane dipeptidase; PFAM: peptidase M19 renal dipeptidase YP_008521124.1 PFAM: ABC-type transporter, periplasmic subunit; KEGG: peptide ABC transporter substrate-binding protein YP_008521125.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transporters inner membrane component YP_008521126.1 PFAM: ABC-type transporter, integral membrane subunit, Oligopeptide transport permease C-like, N-terminal domain; KEGG: dipeptide transport system permease YP_008521127.1 PFAM: ABC transporter related protein; KEGG: ABC transporter; SMART: AAA ATPase; overlaps another CDS with the same product name YP_008521128.1 PFAM: ABC transporter related protein; KEGG: dppF, peptide ABC transporter ATPase; SMART: AAA ATPase; overlaps another CDS with the same product name YP_008521129.1 PFAM: beta-lactamase; KEGG: beta-lactamase YP_008521130.1 PFAM: RmuC-domain protein; KEGG: DNA recombination protein YP_008521131.1 TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; HAMAP : Ubiquinone/menaquinone biosynthesis methyltransferase ubiE; KEGG: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase YP_008521132.1 PFAM: Sterol-binding domain protein; KEGG: sterol-binding domain-containing protein YP_008521133.1 TIGRFAM: 2-polyprenylphenol 6-hydroxylase; HAMAP : ubiquinone biosynthesis protein ubiB; KEGG: ubiB, Ubiquinone biosynthesis monooxygenase UbiB; PFAM: ABC-1 domain-containing protein YP_008521134.1 TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; HAMAP : Sec-independent protein translocase protein tatA/E-like protein; KEGG: tatA, twin-arginine translocation protein TatA; PFAM: sec-independent translocation protein mttA/Hcf106 YP_008521135.1 KEGG: tatB, twin-arginine translocation protein TatB; TIGRFAM: twin-arginine translocation protein, TatB subunit; HAMAP : Sec-independent protein translocase protein tatB-like protein YP_008521136.1 KEGG: tatC, twin-arginine translocation protein TatC; TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase YP_008521137.1 PFAM: TatD-related deoxyribonuclease; KEGG: TatD-related deoxyribonuclease YP_008521138.1 PFAM: delta-aminolevulinic acid dehydratase; KEGG: porphobilinogen synthase; SMART: delta-aminolevulinic acid dehydratase YP_008521139.1 TIGRFAM: transcriptional activator RfaH; PFAM: NGN domain-containing protein; KEGG: transcriptional acivator RfaH; SMART: NGN domain-containing protein, KOW domain protein YP_008521140.1 TIGRFAM: UbiD family decarboxylase; HAMAP : 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; KEGG: ubiD, 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: Carboxylyase-related protein YP_008521141.1 KEGG: oxidoreductase FAD/NAD(P)-binding domain-containing protein; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein, Oxidoreductase FAD-binding domain protein YP_008521143.1 PFAM: Thiolase domain-containing protein; TIGRFAM: acetyl-CoA C-acyltransferase FadA, acetyl-CoA acetyltransferase; HAMAP : 3-ketoacyl-CoA thiolase; KEGG: fadA, 3-ketoacyl-CoA thiolase YP_008521144.1 TIGRFAM: fatty oxidation complex, alpha subunit FadB; KEGG: fatty acid oxidation complex subunit alpha FadB; PFAM: Enoyl-CoA hydratase/isomerase, 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein, 3-hydroxyacyl-CoA dehydrogenase domain-containing protein YP_008521145.1 HAMAP : Xaa-Pro dipeptidase; KEGG: pepQ, proline dipeptidase; PFAM: peptidase M24 YP_008521146.1 KEGG: hypothetical protein; TIGRFAM: protein of unknown function UPF0029; PFAM: Uncharacterized protein family UPF0029, N-terminal acting, Uncharacterized protein family UPF0029, Impact, C-terminal YP_008521147.1 KEGG: TrkH family potassium uptake protein; TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter YP_008521148.1 KEGG: Protoporphyrinogen oxidase; PFAM: Flavodoxin domain YP_008521149.1 PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain-containing protein, FAD linked oxidase domain-containing protein; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; HAMAP : UDP-N-acetylenolpyruvoylglucosamine reductase; KEGG: murB, UDP-N-acetylenolpyruvoylglucosamine reductase, FAD-binding protein YP_008521150.1 TIGRFAM: biotin/acetyl-CoA-carboxylase ligase, biotin operon repressor; KEGG: biotin--protein ligase; PFAM: biotin/lipoate A/B protein ligase, biotin protein ligase domain protein YP_008521151.1 PFAM: phosphoribulokinase/uridine kinase; TIGRFAM: pantothenate kinase; HAMAP : Pantothenate kinase; KEGG: pantothenate kinase YP_008521152.1 PFAM: GCN5-related N-acetyltransferase; KEGG: acetyltransferase YP_008521153.1 TIGRFAM: translation elongation factor Tu, small GTP-binding protein; HAMAP : translation elongation factor Tu; KEGG: translation elongation factor Tu; PFAM: protein synthesis factor GTP-binding protein, elongation factor Tu domain 2 protein, elongation factor Tu domain-containing protein YP_008521154.1 KEGG: secE, preprotein translocase membrane subunit; TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein YP_008521155.1 TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain-containing protein, KOW domain protein; KEGG: nusG, transcription termination factor; SMART: NGN domain-containing protein, KOW domain protein YP_008521156.1 SMART: ribosomal protein L11; TIGRFAM: ribosomal protein L11; KEGG: rplK, 50S ribosomal subunit protein L11; HAMAP : ribosomal protein L11; PFAM: Ribosomal protein L11 YP_008521157.1 TIGRFAM: ribosomal protein L1; HAMAP : ribosomal protein L1; KEGG: 50S ribosomal protein L1; PFAM: ribosomal protein L1 YP_008521158.1 KEGG: 50S ribosomal protein L10; HAMAP : 50S ribosomal protein L10; PFAM: ribosomal protein L10 YP_008521159.1 TIGRFAM: ribosomal protein L7/L12; HAMAP : 50S ribosomal protein L7/L12; KEGG: rplL, 50S ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12 YP_008521160.1 TIGRFAM: DNA-directed RNA polymerase, beta subunit; HAMAP : DNA-directed RNA polymerase subunit beta; KEGG: rpoB, RNA polymerase subunit beta; PFAM: RNA polymerase Rpb2 domain 6, RNA polymerase Rpb2 domain 7, RNA polymerase Rpb2 domain 3, RNA polymerase beta subunit, RNA polymerase Rpb2 domain 2, DNA-directed RNA polymerase, beta subunit, external 1 domain-containing protein YP_008521161.1 SMART: RNA polymerase I subunit A domain protein; TIGRFAM: DNA-directed RNA polymerase, beta' subunit; KEGG: DNA-directed RNA polymerase subunit beta'; HAMAP : DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit gamma; PFAM: RNA polymerase Rpb1 domain 1, RNA polymerase Rpb1 domain 5, RNA polymerase alpha subunit, RNA polymerase Rpb1 domain 3, RNA polymerase Rpb1 domain 4 YP_008521162.1 PFAM: protein of unknown function DUF1176; KEGG: hypothetical protein YP_008521163.1 PFAM: protein of unknown function DUF1127; KEGG: hypothetical protein YP_008521164.1 PFAM: aminotransferase class I and II, regulatory protein GntR HTH; KEGG: GntR family transcriptional regulator; SMART: regulatory protein GntR HTH YP_008521165.1 TIGRFAM: thiazole biosynthesis protein ThiH; PFAM: biotin and thiamin synthesis associated protein, Radical SAM domain protein; KEGG: thiH, thiamine biosynthesis protein ThiH; SMART: biotin and thiamin synthesis associated protein YP_008521166.1 KEGG: thiazole biosynthesis family protein; HAMAP : Thiazole synthase; PFAM: thiazole biosynthesis family protein YP_008521167.1 KEGG: sulfur carrier protein ThiS; TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamine S protein YP_008521168.1 PFAM: UBA/THIF-type NAD/FAD binding protein, MoeZ/MoeB domain protein; KEGG: thiF, thiamin (thiazole moiety) biosynthesis protein YP_008521169.1 TIGRFAM: thiamine-phosphate pyrophosphorylase; HAMAP : Thiamine-phosphate pyrophosphorylase; KEGG: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase YP_008521170.1 TIGRFAM: thiamine biosynthesis protein ThiC; HAMAP : Phosphomethylpyrimidine synthase; KEGG: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC, ThiC-associated domain YP_008521171.1 PFAM: regulator of RNA polymerase sigma(70) subunit Rsd/AlgQ; KEGG: regulator of RpoD, Rsd/AlgQ YP_008521172.1 HAMAP : NADH pyrophosphatase; KEGG: nudC, NADH pyrophosphatase; PFAM: NUDIX hydrolase, Zinc ribbon NADH pyrophosphatase, NADH pyrophosphatase-like YP_008521173.1 PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: uroporphyrinogen decarboxylase; HAMAP : Uroporphyrinogen decarboxylase; KEGG: hemE, uroporphyrinogen decarboxylase YP_008521174.1 HAMAP : Endonuclease V; KEGG: nfi, endonuclease V; PFAM: Endonuclease V YP_008521175.1 PFAM: protein of unknown function DUF416; KEGG: hypothetical protein YP_008521176.1 KEGG: DNA-binding protein HU-alpha; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein YP_008521177.1 PFAM: protein of unknown function DUF1481; KEGG: hypothetical protein YP_008521178.1 PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain-containing protein, Phosphoribosylglycinamide synthetase, N-domain-containing protein, Phosphoribosylglycinamide synthetase, C-domain-containing protein; TIGRFAM: phosphoribosylamine/glycine ligase; HAMAP : Phosphoribosylamine--glycine ligase; KEGG: phosphoribosylamine--glycine ligase YP_008521179.1 KEGG: purH, phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme, MGS domain protein; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; HAMAP : Bifunctional purine biosynthesis protein purH; SMART: AICARFT/IMPCHase bienzyme, MGS domain protein YP_008521181.1 KEGG: transcriptional regulator/sugar kinase YP_008521182.1 PFAM: ABC transporter related protein; KEGG: yhdZ, hypothetical protein; SMART: AAA ATPase YP_008521183.1 KEGG: polar amino acid ABC transporter permease; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: ABC-type transporter, integral membrane subunit YP_008521184.1 KEGG: polar amino acid ABC transporter permease; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: ABC-type transporter, integral membrane subunit YP_008521185.1 KEGG: family 3 extracellular solute-binding protein; PFAM: ABC-type transporter, periplasmic subunit family 3; SMART: ABC-type transporter, periplasmic subunit family 3 YP_008521186.1 KEGG: CTP synthase; PFAM: Glutamine amidotransferase type 1 YP_008521187.1 KEGG: polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: ABC-type transporter, integral membrane subunit YP_008521188.1 KEGG: family 3 extracellular solute-binding protein; PFAM: ABC-type transporter, periplasmic subunit family 3; SMART: ABC-type transporter, periplasmic subunit family 3 YP_008521189.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: endonuclease/exonuclease/phosphatase YP_008521190.1 KEGG: fis, DNA-binding protein Fis; HAMAP : DNA-binding protein fis; PFAM: helix-turn-helix Fis-type YP_008521191.1 KEGG: TIM-barrel protein, nifR3 family; TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS YP_008521192.1 TIGRFAM: ribosomal protein L11 methyltransferase; HAMAP : Ribosomal protein L11 methyltransferase; KEGG: prmA, ribosomal protein L11 methyltransferase; PFAM: ribosomal L11 methyltransferase YP_008521193.1 KEGG: sodium/panthothenate symporter; TIGRFAM: sodium/pantothenate symporter, SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter YP_008521194.1 PFAM: protein of unknown function DUF997; KEGG: yhdT, hypothetical protein YP_008521195.1 SMART: biotin carboxylase domain protein; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; KEGG: accC, acetyl-CoA carboxylase biotin carboxylase subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding protein, Carbamoyl-phosphate synthetase large chain domain protein, biotin carboxylase domain protein YP_008521196.1 KEGG: acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein YP_008521197.1 PFAM: dehydroquinase class II; TIGRFAM: 3-dehydroquinate dehydratase, type II; HAMAP : 3-dehydroquinate dehydratase; KEGG: 3-dehydroquinate dehydratase YP_008521198.1 KEGG: yedZ, hypothetical protein; HAMAP : Sulfoxide reductase heme-binding subunit yedZ; PFAM: Ferric reductase domain protein transmembrane component domain-containing protein YP_008521199.1 KEGG: yedY, reductase; HAMAP : Sulfoxide reductase catalytic subunit yedY; PFAM: oxidoreductase molybdopterin binding protein YP_008521200.1 TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase zinc-binding domain protein, Alcohol dehydrogenase GroES domain protein; KEGG: YhdH/YhfP family quinone oxidoreductase; SMART: Polyketide synthase, enoylreductase YP_008521201.1 KEGG: regulatory protein CsrD; PFAM: EAL domain-containing protein, GGDEF domain containing protein; SMART: EAL domain-containing protein, GGDEF domain containing protein YP_008521202.1 KEGG: cell shape determining protein, MreB; TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl YP_008521203.1 KEGG: rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC YP_008521204.1 KEGG: rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD; PFAM: Rod shape-determining protein MreD YP_008521205.1 TIGRFAM: maf protein; HAMAP : Septum formation protein Maf; KEGG: maf, Maf-like protein; PFAM: Maf family protein YP_008521206.1 TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA-binding protein AU-1/Ribonuclease E/G, RNA binding S1 domain protein; KEGG: ribonuclease G; SMART: RNA-binding domain, S1 YP_008521207.1 KEGG: hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02099; PFAM: Domain of unknown function DUF3971 YP_008521208.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: peptidase U62 modulator of DNA gyrase YP_008521209.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: LysR family transcriptional regulator YP_008521210.1 KEGG: hypothetical protein; HAMAP : Protein AaeX; PFAM: protein of unknown function DUF1656 YP_008521211.1 TIGRFAM: efflux transporter, RND family, MFP subunit; HAMAP : p-hydroxybenzoic acid efflux pump subunit AaeA; KEGG: secretion protein HlyD family protein; PFAM: secretion protein HlyD family protein YP_008521212.1 KEGG: p-hydroxybenzoic acid efflux subunit AaeB; HAMAP : p-hydroxybenzoic acid efflux pump subunit AaeB; PFAM: Fusaric acid resistance protein conserved region YP_008521213.1 KEGG: FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase YP_008521214.1 TIGRFAM: hexulose-6-phosphate isomerase; KEGG: L-ribulose-5-phosphate 3-epimerase ulaE; PFAM: Xylose isomerase domain-containing protein TIM barrel YP_008521215.1 PFAM: Orotidine 5'-phosphate decarboxylase; KEGG: 3-keto-L-gulonate-6-phosphate decarboxylase UlaD (L-ascorbate utilization protein D); SMART: Orotidine 5'-phosphate decarboxylase YP_008521216.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: PTS system L-ascorbate-specific transporter subunit IIA YP_008521217.1 PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: PTS system L-ascorbate-specific transporter subunit IIB YP_008521218.1 PFAM: PTS system Galactitol-specific IIC component; KEGG: PTS system ascorbate-specific transporter YP_008521219.1 KEGG: putative L-ascorbate 6-phosphate lactonase YP_008521220.1 KEGG: transcriptional repressor UlaR; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_008521221.1 SMART: Rhodanese-like protein; HAMAP : Thiosulfate sulfurtransferase glpE; KEGG: Thiosulfate sulfurtransferase; PFAM: Rhodanese-like protein YP_008521222.1 PFAM: PfkB domain protein, regulatory protein DeoR; KEGG: ribokinase; SMART: regulatory protein DeoR YP_008521223.1 TIGRFAM: Rhomboid protease GlpG; KEGG: intramembrane serine protease GlpG; PFAM: Peptidase S54, GlpG peptidase, N-terminal, Peptidase S54, rhomboid domain YP_008521224.1 KEGG: DeoR family transcriptional regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_008521225.1 KEGG: malP, glycogen phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35 YP_008521226.1 TIGRFAM: 4-alpha-glucanotransferase; KEGG: malQ, 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77 YP_008521227.1 TIGRFAM: IscR-regulated protein YhgI; HAMAP : Fe/S biogenesis protein nfuA; KEGG: nfuA, Fe/S biogenesis protein; PFAM: HesB/YadR/YfhF-family protein, nitrogen-fixing NifU domain-containing protein YP_008521228.1 PFAM: phosphoribosyltransferase; KEGG: phosphoribosyltransferase YP_008521229.1 TIGRFAM: bioH protein; HAMAP : Carboxylesterase bioH; KEGG: biotin biosynthesis protein YP_008521230.1 KEGG: yhgF, transcriptional accessory protein; PFAM: Tex-like protein, RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold-containing protein, RNA-binding domain, S1 YP_008521231.1 KEGG: phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase YP_008521232.1 PFAM: sulfatase; KEGG: sulfatase YP_008521233.1 TIGRFAM: transcription elongation factor GreB; HAMAP : Transcription elongation factor greA; KEGG: greB, transcription elongation factor GreB; PFAM: Transcription elongation factor, GreA/GreB, N-terminal, transcription elongation factor GreA/GreB domain-containing protein YP_008521234.1 KEGG: ompR, osmolarity response regulator; PFAM: response regulator receiver, transcriptional regulator domain-containing protein; SMART: response regulator receiver, transcriptional regulator domain-containing protein YP_008521235.1 KEGG: envZ, osmolarity sensor protein; PFAM: ATP-binding region ATPase domain protein, histidine kinase A domain protein, histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein, histidine kinase HAMP region domain protein YP_008521236.1 PFAM: phosphoenolpyruvate carboxykinase (ATP); TIGRFAM: phosphoenolpyruvate carboxykinase (ATP); HAMAP : Phosphoenolpyruvate carboxykinase [ATP]; KEGG: pck, phosphoenolpyruvate carboxykinase YP_008521237.1 KEGG: Hsp33 protein; HAMAP : 33 kDa chaperonin; PFAM: Hsp33 protein YP_008521238.1 KEGG: RNA-binding S4 domain-containing protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_008521239.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; KEGG: HAD-superfamily hydrolase YP_008521240.1 PFAM: Intracellular growth attenuator IgaA; KEGG: yrfF, inner membrane protein YP_008521241.1 PFAM: NUDIX hydrolase; KEGG: NUDIX hydrolase YP_008521242.1 TIGRFAM: penicillin-binding protein, 1A family; KEGG: mrcA, penicillin-binding protein 1A (PBP1A); PFAM: glycosyl transferase family 51, penicillin-binding protein transpeptidase YP_008521243.1 KEGG: hypothetical protein YP_008521244.1 PFAM: Fimbrial assembly family protein; KEGG: type IV pilus biogenesis protein PilN YP_008521245.1 KEGG: hypothetical protein YP_008521246.1 PFAM: Protein of unknown function DUF2531; KEGG: Inner membrane protein YP_008521247.1 TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein, Secretin/TonB short domain-containing protein, NolW domain protein; KEGG: hofQ, outer membrane porin HofQ; SMART: Secretin/TonB short domain-containing protein YP_008521248.1 HAMAP : Shikimate kinase; KEGG: shikimate kinase I; PFAM: shikimate kinase YP_008521249.1 TIGRFAM: 3-dehydroquinate synthase; HAMAP : 3-dehydroquinate synthase; KEGG: aroB, 3-dehydroquinate synthase YP_008521250.1 PFAM: Sporulation domain-containing protein; KEGG: damX, membrane protein YP_008521251.1 KEGG: DNA adenine methylase; TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase YP_008521252.1 TIGRFAM: ribulose-phosphate 3-epimerase; KEGG: ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase YP_008521253.1 TIGRFAM: phosphoglycolate phosphatase, HAD-superfamily hydrolase, subfamily IA, variant 3, HAD-superfamily hydrolase, subfamily IA, variant 1; HAMAP : Phosphoglycolate phosphatase; KEGG: phosphoglycolate phosphatase YP_008521254.1 PFAM: aminoacyl-tRNA synthetase class Ib; TIGRFAM: tryptophanyl-tRNA synthetase; HAMAP : Tryptophan-tRNA ligase, bacterial-type; KEGG: tryptophanyl-tRNA synthetase YP_008521255.1 KEGG: yjgA, hypothetical protein; HAMAP : UPF0307 protein yjgA; PFAM: Uncharacterized protein family UPF0307 YP_008521256.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: peptidase U62 modulator of DNA gyrase YP_008521257.1 PFAM: transcription elongation factor GreA/GreB domain-containing protein; KEGG: nucleoside diphosphate kinase regulator YP_008521258.1 KEGG: phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr); TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr YP_008521259.1 HAMAP : UPF0042 nucleotide-binding protein yhbJ; KEGG: hypothetical protein YP_008521260.1 KEGG: ptsN, PTS system sugar-specific transporter subunit IIA; TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 YP_008521261.1 KEGG: hpf, ribosome-associated factor; TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA YP_008521262.1 KEGG: RNA polymerase sigma-54 subunit RpoN; TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor core-binding region, sigma-54 DNA-binding domain protein, sigma-54 factor YP_008521263.1 PFAM: ABC transporter related protein; KEGG: ABC transporter; SMART: AAA ATPase YP_008521264.1 KEGG: lipopolysaccharide transport periplasmic protein LptA; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; PFAM: OstA family protein YP_008521265.1 PFAM: protein of unknown function DUF1239; KEGG: hypothetical protein YP_008521266.1 TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; KEGG: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase type 3 YP_008521267.1 TIGRFAM: KpsF/GutQ family protein; KEGG: KpsF/GutQ family protein; PFAM: sugar isomerase (SIS), CBS domain containing protein YP_008521268.1 KEGG: calcium/sodium:proton antiporter; TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region YP_008521269.1 PFAM: ABC transporter related protein; KEGG: yrbF, toluene transporter subunit: ATP-binding protein; SMART: AAA ATPase YP_008521270.1 KEGG: yrbE, toluene transporter subunit: membrane protein; TIGRFAM: protein of unknown function DUF140; PFAM: protein of unknown function DUF140 YP_008521271.1 PFAM: Mammalian cell entry related domain protein; KEGG: yrbD, ABC-type organic solvent transporter YP_008521272.1 PFAM: toluene tolerance family protein; KEGG: toluene tolerance family protein YP_008521273.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: yrbB, hypothetical protein YP_008521274.1 PFAM: BolA family protein; KEGG: yrbA, DNA-binding transcriptional regulator YP_008521275.1 PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; HAMAP : UDP-N-acetylglucosamine 1-carboxyvinyltransferase; KEGG: murA, UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_008521276.1 SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: periplasmic serine protease DegS; KEGG: degS, serine endoprotease, periplasmic; PFAM: PDZ/DHR/GLGF domain protein YP_008521277.1 SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: protease Do; KEGG: degQ, exported protease; PFAM: PDZ/DHR/GLGF domain protein YP_008521278.1 PFAM: protein of unknown function DUF1043; KEGG: cytochrome d ubiquinol oxidase subunit III YP_008521279.1 PFAM: AFG1-family ATPase; KEGG: AFG1-family ATPase YP_008521280.1 TIGRFAM: ribosomal protein L13; HAMAP : ribosomal protein L13; KEGG: rplM, 50S ribosomal protein L13; PFAM: ribosomal protein L13 YP_008521281.1 KEGG: rpsI, 30S ribosomal protein S9; HAMAP : Ribosomal protein S9, bacterial/plastid; PFAM: ribosomal protein S9 YP_008521282.1 PFAM: Glutathione S-transferase domain-containing protein; KEGG: sspA, stringent starvation protein A YP_008521283.1 PFAM: Stringent starvation protein B; KEGG: Stringent starvation protein B YP_008521284.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: hypothetical protein YP_008521285.1 TIGRFAM: glutamate synthase, small subunit; KEGG: gltD, glutamate synthase, 4Fe-4S protein, small subunit; PFAM: Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YP_008521286.1 KEGG: gltB, glutamate synthase, large subunit; PFAM: ferredoxin-dependent glutamate synthase, glutamine amidotransferase class-II, glutamate synthase, glutamate synthase alpha subunit domain protein YP_008521287.1 TIGRFAM: Conserved hypothetical protein CHP01212; PFAM: Radical SAM domain protein; KEGG: hypothetical protein; SMART: Elongator protein 3/MiaB/NifB YP_008521288.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, PAS fold domain protein, Hpt domain protein, response regulator receiver, histidine kinase A domain protein; KEGG: aerobic respiration control sensor protein ArcB; SMART: ATP-binding region ATPase domain protein, response regulator receiver, PAS domain containing protein, Hpt domain protein, histidine kinase A domain protein YP_008521289.1 PFAM: ThiJ/PfpI domain-containing protein; KEGG: isoprenoid biosynthesis protein YP_008521290.1 TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; HAMAP : Monofunctional biosynthetic peptidoglycan transglycosylase; KEGG: monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: glycosyl transferase family 51 YP_008521291.1 PFAM: Alginate lyase; KEGG: hypothetical protein YP_008521292.1 KEGG: yraP, hypothetical protein; PFAM: transport-associated protein; SMART: Transport-associated and nodulation region YP_008521293.1 KEGG: DnaA initiator-associating protein DiaA; HAMAP : DnaA initiator-associating protein diaA; PFAM: sugar isomerase (SIS) YP_008521294.1 KEGG: hypothetical protein; TIGRFAM: Uncharacterized protein family UPF0102; PFAM: Uncharacterized protein family UPF0102 YP_008521295.1 KEGG: yraM, lipoprotein; HAMAP : LppC family lipoprotein; PFAM: LppC family lipoprotein YP_008521296.1 TIGRFAM: protein of unknown function UPF0011; HAMAP : Ribosomal RNA small subunit methyltransferase I; KEGG: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_008521297.1 KEGG: hypothetical protein YP_008521298.1 PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: hypothetical protein YP_008521299.1 KEGG: ygiC, glutathionylspermidine synthase; PFAM: glutathionylspermidine synthase YP_008521300.1 KEGG: putative integral membrane protein; HAMAP : UPF0441 protein ygiB; PFAM: protein of unknown function DUF1190 YP_008521301.1 KEGG: tolC, outer membrane channel protein; TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein YP_008521302.1 TIGRFAM: nucleoside diphosphate pyrophosphatase; KEGG: nudF, ADP-ribose pyrophosphatase NudF; PFAM: NUDIX hydrolase YP_008521303.1 PFAM: protein of unknown function DUF1249; KEGG: yqiB, dehydrogenase YP_008521304.1 KEGG: cpdA, Icc protein; HAMAP : 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA; PFAM: metallophosphoesterase YP_008521305.1 PFAM: protein of unknown function UPF0227; KEGG: esterase YqiA YP_008521306.1 SMART: DNA topoisomerase II, ATP-binding region ATPase domain protein; TIGRFAM: DNA topoisomerase IV, B subunit; KEGG: DNA topoisomerase IV subunit B; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein, DNA gyrase subunit B domain protein, TOPRIM domain-containing protein, ATP-binding region ATPase domain protein YP_008521307.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: LysR family transcriptional regulator YP_008521308.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: mdaB, Modulator of drug activity B YP_008521309.1 TIGRFAM: ketose-bisphosphate aldolase; KEGG: ketose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II YP_008521310.1 KEGG: sugar-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II YP_008521311.1 KEGG: PTS system fructose subfamily transporter subunit IIC; TIGRFAM: PTS system, fructose subfamily, IIC subunit; PFAM: phosphotransferase system EIIC YP_008521312.1 KEGG: PTS system fructose-specific transporter subunit IIB; TIGRFAM: PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit YP_008521313.1 KEGG: PTS system transporter subunit IIA; TIGRFAM: PTS system, fructose subfamily, IIA subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 YP_008521314.1 KEGG: transcriptional antiterminator BglG; PFAM: PRD domain protein, M trans-acting positive regulator YP_008521315.1 SMART: DNA gyrase/topoisomerase IV subunit A; TIGRFAM: DNA topoisomerase IV, A subunit; KEGG: DNA topoisomerase IV subunit A; PFAM: DNA gyrase/topoisomerase IV subunit A, DNA gyrase repeat beta-propeller YP_008521316.1 SMART: phospholipid/glycerol acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; KEGG: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase YP_008521317.1 KEGG: sufI, divisomal assembly stabilization protein; HAMAP : Cell division protein FtsP; PFAM: multicopper oxidase type 3, multicopper oxidase type 2 YP_008521318.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: hypothetical protein YP_008521319.1 PFAM: major facilitator superfamily MFS_1; KEGG: arabinose efflux permease family protein YP_008521320.1 KEGG: gentisate 1,2-dioxygenase; TIGRFAM: gentisate 1,2-dioxygenase; PFAM: Cupin 2 conserved barrel domain protein YP_008521321.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: putative fumarylacetoacetate hydrolase domain-containing protein 1 YP_008521322.1 TIGRFAM: maleylacetoacetate isomerase; KEGG: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase domain-containing protein YP_008521323.1 PFAM: PfkB domain protein; KEGG: PfkB domain-containing protein YP_008521324.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: cytosine/purines uracil thiamine allantoin permease YP_008521325.1 PFAM: ADP-ribosylation/Crystallin J1; KEGG: ADP-ribosylation/crystallin J1 YP_008521326.1 KEGG: GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated domain-containing protein, regulatory protein GntR HTH; SMART: UbiC transcription regulator-associated domain-containing protein, regulatory protein GntR HTH YP_008521327.1 KEGG: 2,5-diketo-D-gluconate reductase A; PFAM: NADP-dependent oxidoreductase domain YP_008521328.1 TIGRFAM: valyl-tRNA synthetase; HAMAP : Valyl-tRNA synthetase; KEGG: valyl-tRNA synthetase YP_008521329.1 KEGG: DNA-directed DNA polymerase; PFAM: DNA polymerase III chi subunit HolC YP_008521330.1 HAMAP : cytosol aminopeptidase; KEGG: leucyl aminopeptidase; PFAM: peptidase M17 leucyl aminopeptidase domain protein YP_008521331.1 PFAM: permease YjgP/YjgQ family protein; KEGG: permease; overlaps another CDS with the same product name YP_008521332.1 PFAM: permease YjgP/YjgQ family protein; KEGG: permease YjgP/YjgQ family protein; overlaps another CDS with the same product name YP_008521333.1 PFAM: Domain of unknown function DUF4102, integrase family protein; KEGG: integrase YP_008521334.1 KEGG: 5'-nucleotidase; PFAM: 5-nucleotidase YP_008521335.1 PFAM: Domain of unknown function DUF2075, NERD domain protein; KEGG: NERD domain-containing protein YP_008521336.1 TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: Protein of unknown function DUF3387, type III restriction protein res subunit, Restriction endonuclease, type I, EcoRI, R subunit/Type III; KEGG: HsdR family type I site-specific deoxyribonuclease; SMART: DEAD-like helicase YP_008521337.1 PFAM: Domain of unknown function DUF4268; KEGG: hypothetical protein YP_008521338.1 PFAM: restriction modification system DNA specificity domain-containing protein; KEGG: restriction modification system DNA specificity domain-containing protein YP_008521339.1 KEGG: hypothetical protein; PFAM: N-6 DNA methylase, N6 adenine-specific DNA methyltransferase, N12 class, N-terminal YP_008521340.1 KEGG: hypothetical protein YP_008521341.1 PFAM: Methyltransferase domain; KEGG: hypothetical protein YP_008521342.1 PFAM: CopG-like domain-containing protein DNA-binding protein; KEGG: plasmid-like protein YP_008521343.1 PFAM: plasmid stabilization system; KEGG: plasmid-like protein YP_008521344.1 PFAM: Domain of unknown function DUF4095; KEGG: hypothetical protein YP_008521345.1 KEGG: hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_008521346.1 PFAM: Domain of unknown function DUF4102; KEGG: integrase family protein YP_008521347.1 PFAM: integrase family protein; KEGG: integrase family protein YP_008521348.1 SMART: helix-turn-helix domain protein; KEGG: XRE family transcriptional regulator YP_008521349.1 PFAM: protein of unknown function DUF891; KEGG: hypothetical protein YP_008521350.1 KEGG: CopG family transcriptional regulator YP_008521352.1 KEGG: XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_008521353.1 KEGG: HipA N-terminal domain-containing protein; TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein YP_008521354.1 KEGG: hypothetical protein YP_008521355.1 PFAM: Glycine-zipper-containing OmpA-like membrane domain; KEGG: hypothetical protein YP_008521356.1 KEGG: hypothetical protein YP_008521357.1 PFAM: major facilitator superfamily MFS_1; KEGG: yebQ, transporter YP_008521358.1 KEGG: glucuronoarabinoxylan endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 30 YP_008521359.1 KEGG: anaerobic C4-dicarboxylate transporter; TIGRFAM: anaerobic c4-dicarboxylate antiporter, Dcu family; PFAM: anaerobic c4-dicarboxylate membrane transporter YP_008521360.1 TIGRFAM: aspartate ammonia-lyase; KEGG: aspA1, aspartate ammonia-lyase; PFAM: Lyase 1, N-terminal, Fumarase C YP_008521361.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: LysR family transcriptional regulator YP_008521362.1 TIGRFAM: mobile mystery protein A; PFAM: helix-turn-helix domain protein; KEGG: mobile mystery protein A; SMART: helix-turn-helix domain protein YP_008521363.1 KEGG: mobile mystery protein B YP_008521364.1 TIGRFAM: chorismate mutase; PFAM: Chorismate mutase, type II; KEGG: chorismate mutase; SMART: Chorismate mutase YP_008521365.1 PFAM: major facilitator superfamily MFS_1; KEGG: major facilitator superfamily protein YP_008521366.1 KEGG: metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain-containing protein; SMART: metal-dependent phosphohydrolase HD region YP_008521367.1 SMART: class II aldolase/adducin family protein; TIGRFAM: L-ribulose-5-phosphate 4-epimerase; KEGG: L-ribulose-5-phosphate 4-epimerase; PFAM: class II aldolase/adducin family protein YP_008521368.1 TIGRFAM: hexulose-6-phosphate isomerase; KEGG: sgbU, putative L-xylulose 5-phosphate 3-epimerase; PFAM: Xylose isomerase domain-containing protein TIM barrel YP_008521369.1 PFAM: Orotidine 5'-phosphate decarboxylase; KEGG: sgbH, 3-keto-L-gulonate-6-phosphate decarboxylase; SMART: Orotidine 5'-phosphate decarboxylase YP_008521370.1 KEGG: hypothetical protein; PFAM: Carbohydrate kinase, FGGY YP_008521371.1 PFAM: major facilitator superfamily MFS_1; KEGG: sugar phosphate permease YP_008521372.1 KEGG: yiaL, hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00022; PFAM: Conserved hypothetical protein CHP00022 YP_008521373.1 HAMAP : 2,3-diketo-L-gulonate reductase; KEGG: 2,3-diketo-L-gulonate reductase; PFAM: Malate/L-lactate dehydrogenase YP_008521374.1 KEGG: yiaJ, transcriptional regulator; PFAM: Transcriptional regulator IclR , regulatory protein IclR; SMART: regulatory protein IclR YP_008521375.1 PFAM: ABC transporter related protein; KEGG: ABC transporter; SMART: AAA ATPase; overlaps another CDS with the same product name YP_008521376.1 PFAM: ABC transporter related protein; KEGG: oligopeptide ABC transporter ATP-binding protein; SMART: AAA ATPase; overlaps another CDS with the same product name YP_008521377.1 KEGG: methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer, 4HB MCP domain; SMART: chemotaxis sensory transducer YP_008521378.1 TIGRFAM: L-rhamnose 1-epimerase; HAMAP : L-rhamnose mutarotase; KEGG: yiiL, L-rhamnose mutarotase; PFAM: protein of unknown function DUF718 YP_008521379.1 KEGG: rhaD, rhamnulose-1-phosphate aldolase; PFAM: class II aldolase/adducin family protein; TIGRFAM: rhamnulose-1-phosphate aldolase; HAMAP : Rhamnulose-1-phosphate aldolase; SMART: class II aldolase/adducin family protein YP_008521380.1 PFAM: L-rhamnose isomerase; TIGRFAM: L-rhamnose isomerase; HAMAP : L-rhamnose isomerase; KEGG: L-rhamnose isomerase YP_008521381.1 PFAM: Carbohydrate kinase, FGGY; TIGRFAM: rhamnulokinase; HAMAP : Rhamnulokinase; KEGG: rhaB, rhamnulokinase YP_008521382.1 HAMAP : HTH-type transcriptional activator rhaS; PFAM: Helix-turn-helix, AraC domain-containing protein, AraC protein arabinose-binding/dimerization; KEGG: rhaS, L-rhamnose-binding DNA-binding protein transcriptional activator; SMART: Helix-turn-helix, AraC domain-containing protein YP_008521383.1 HAMAP : HTH-type transcriptional activator rhaR; PFAM: Helix-turn-helix, AraC domain-containing protein, AraC protein arabinose-binding/dimerization; KEGG: AraC family transcriptional regulator; SMART: Helix-turn-helix, AraC domain-containing protein YP_008521384.1 KEGG: rhamnose-proton symporter; HAMAP : L-rhamnose-proton symporter; PFAM: RhaT l-rhamnose-proton symport YP_008521385.1 KEGG: UbiH/UbiF/VisC/COQ6 family Ubiquinone biosynthesis hydroxylase; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding protein YP_008521386.1 KEGG: 2-polyprenyl-6-methoxyphenol 4-hydroxylase; TIGRFAM: 2-polyprenyl-6-methoxyphenol 4-hydroxylase, Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding protein YP_008521387.1 KEGG: proline aminopeptidase P II; PFAM: peptidase M24, peptidase M24B X-Pro dipeptidase/aminopeptidase domain protein; SMART: peptidase M24B X-Pro dipeptidase/aminopeptidase domain protein YP_008521388.1 TIGRFAM: yecA family protein; HAMAP : UPF0149 protein ygfB; KEGG: hypothetical protein; PFAM: Uncharacterized protein family UPF0149 (YgfB) YP_008521389.1 KEGG: Z-ring-associated protein; HAMAP : Cell division protein zapA; PFAM: protein of unknown function DUF710 YP_008521390.1 KEGG: 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase YP_008521391.1 TIGRFAM: nicotinamide-nucleotide adenylyltransferase, cytidyltransferase-related domain protein; PFAM: helix-turn-helix domain protein; KEGG: nadR, NadR transcriptional repressor/ribosylnicotinamide kinase/NMN adenylyltransferase; SMART: helix-turn-helix domain protein YP_008521392.1 KEGG: DNA repair protein RadA; TIGRFAM: DNA repair protein RadA; SMART: AAA ATPase YP_008521393.1 TIGRFAM: phosphoserine phosphatase SerB, HAD-superfamily hydrolase, subfamily IB (PSPase-like); KEGG: serB, phosphoserine phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase YP_008521394.1 PFAM: Virulence factor, hemolysin regulator; KEGG: hypothetical protein YP_008521395.1 TIGRFAM: peptide chain release factor 3, small GTP-binding protein; HAMAP : Peptide chain release factor 3; KEGG: prfC, peptide chain release factor RF-3; PFAM: protein synthesis factor GTP-binding protein, elongation factor Tu domain 2 protein YP_008521396.1 KEGG: transport-associated protein; PFAM: transport-associated protein; SMART: Transport-associated and nodulation region YP_008521397.1 PFAM: TatD-related deoxyribonuclease; KEGG: TatD-related deoxyribonuclease YP_008521398.1 KEGG: nucleoside transporter; TIGRFAM: nucleoside transporter; PFAM: Na+ dependent nucleoside transporter domain protein, nucleoside recognition domain protein, Na+ dependent nucleoside transporter YP_008521399.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: 4'-phosphopantetheinyl transferase YP_008521400.1 KEGG: oxidoreductase; PFAM: short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR YP_008521401.1 KEGG: hypothetical protein; PFAM: aminotransferase class I and II YP_008521402.1 PFAM: major facilitator superfamily MFS_1; KEGG: major facilitator family transporter YP_008521403.1 KEGG: methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer, ligand binding Tar domain protein, histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer, histidine kinase HAMP region domain protein, ligand binding Tar domain protein YP_008521404.1 PFAM: ABC transporter related protein; KEGG: ABC transporter; SMART: AAA ATPase YP_008521405.1 PFAM: ABC transporter related protein; KEGG: ABC transporter; SMART: AAA ATPase YP_008521406.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: inner-membrane translocator YP_008521407.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: inner-membrane translocator YP_008521408.1 KEGG: extracellular ligand-binding receptor YP_008521409.1 KEGG: GntR family transcriptional regulator; PFAM: GntR domain protein, regulatory protein GntR HTH; SMART: GntR domain protein, regulatory protein GntR HTH YP_008521410.1 PFAM: Glyoxalase-like domain; KEGG: hypothetical protein YP_008521411.1 TIGRFAM: amidohydrolase; KEGG: amidohydrolase; PFAM: peptidase M20, peptidase dimerization domain protein YP_008521412.1 KEGG: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent YP_008521413.1 TIGRFAM: sulfite reductase, subunit A; KEGG: anaerobic sulfite reductase subunit A YP_008521414.1 KEGG: anaerobic sulfite reductase subunit B; TIGRFAM: sulfite reductase, subunit B; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein, Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulfur cluster binding domain-containing protein, Oxidoreductase FAD-binding domain protein YP_008521415.1 KEGG: asrC, anaerobic sulfite reductase subunit C; TIGRFAM: sulfite reductase, subunit C; PFAM: nitrite and sulfite reductase 4Fe-4S region, nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein, 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_008521416.1 TIGRFAM: uroporphyrin-III C-methyltransferase; KEGG: Sirohydrochlorin ferrochelatase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_008521417.1 KEGG: GAF modulated Fis family sigma-54 specific transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein, helix-turn-helix Fis-type; SMART: AAA ATPase YP_008521418.1 PFAM: ATP-NAD/AcoX kinase; KEGG: acoX, acetoin catabolism protein X, ATP-NAD kinase AcoX YP_008521419.1 KEGG: acetoin dehydrogenase E1 component alpha-subunit; PFAM: dehydrogenase E1 component YP_008521420.1 PFAM: Transketolase central region, Transketolase domain-containing protein; KEGG: acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta; SMART: Transketolase central region YP_008521421.1 PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: acoC, branched-chain alpha-keto acid dehydrogenase subunit e2 YP_008521422.1 KEGG: biotin/lipoate A/B protein ligase YP_008521423.1 PFAM: Domain of unknown function DUF4102; KEGG: MobC mobilization protein YP_008521424.1 KEGG: putative TetR family transcriptional regulator YP_008521425.1 HAMAP : Thiol:disulfide interchange protein dsbD; KEGG: cytochrome c biogenesis protein transmembrane region; PFAM: cytochrome c biogenesis protein transmembrane region, Thioredoxin-like fold-containing protein YP_008521426.1 PFAM: CutA1 divalent ion tolerance protein; KEGG: divalent-cation tolerance protein CutA YP_008521427.1 KEGG: dcuA, C4-dicarboxylate antiporter; TIGRFAM: anaerobic c4-dicarboxylate antiporter, Dcu family; PFAM: anaerobic c4-dicarboxylate membrane transporter YP_008521428.1 TIGRFAM: aspartate ammonia-lyase; KEGG: aspA, aspartate ammonia-lyase; PFAM: Lyase 1, N-terminal, Fumarase C YP_008521429.1 PFAM: FxsA cytoplasmic membrane protein; KEGG: FxsA cytoplasmic membrane protein YP_008521430.1 HAMAP : 10 kDa chaperonin; PFAM: Chaperonin Cpn10; KEGG: groES, co-chaperonin GroES; SMART: Chaperonin Cpn10 YP_008521431.1 TIGRFAM: chaperonin GroEL; HAMAP : 60 kDa chaperonin; KEGG: groEL, molecular chaperone GroEL; PFAM: chaperonin Cpn60/TCP-1 YP_008521432.1 HAMAP : Chorismate--pyruvate lyase; KEGG: ubiC, chorismate pyruvate lyase; PFAM: Chorismate lyase YP_008521433.1 TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; HAMAP : 4-hydroxybenzoate octaprenyltransferase; KEGG: ubiA, 4-hydroxybenzoate octaprenyltransferase; PFAM: UbiA prenyltransferase YP_008521434.1 KEGG: glycerol-3-phosphate O-acyltransferase; PFAM: phospholipid/glycerol acyltransferase; TIGRFAM: glycerol-3-phosphate O-acyltransferase; HAMAP : Glycerol-3-phosphate acyltransferase; SMART: phospholipid/glycerol acyltransferase YP_008521435.1 PFAM: diacylglycerol kinase; KEGG: diacylglycerol kinase YP_008521436.1 TIGRFAM: LexA repressor; HAMAP : LexA repressor; KEGG: lexA, DNA-binding transcriptional repressor; PFAM: LexA DNA-binding domain protein, Peptidase S24/S26A/S26B, conserved region YP_008521437.1 PFAM: ferric-uptake regulator; KEGG: zinc uptake transcriptional repressor YP_008521438.1 PFAM: Pirin domain protein; KEGG: yhaK, pirin-related protein YP_008521439.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: LysR family transcriptional regulator YP_008521440.1 KEGG: glutathione transferase YP_008521441.1 PFAM: DoxX family protein; KEGG: hypothetical protein YP_008521442.1 PFAM: YqjK-like protein; KEGG: hypothetical protein YP_008521443.1 KEGG: hypothetical protein YP_008521444.1 PFAM: protein of unknown function DUF883 ElaB; KEGG: hypothetical protein YP_008521445.1 HAMAP : Modulator protein MzrA; KEGG: hypothetical protein YP_008521446.1 PFAM: SNARE associated protein; KEGG: hypothetical protein YP_008521447.1 KEGG: exuR, DNA-binding transcriptional regulator ExuR; PFAM: regulatory protein GntR HTH, GntR domain protein; SMART: regulatory protein GntR HTH, GntR domain protein YP_008521448.1 PFAM: major facilitator superfamily MFS_1; KEGG: d-galactonate transporter YP_008521449.1 HAMAP : Uronate isomerase; KEGG: glucuronate isomerase; PFAM: Glucuronate isomerase YP_008521450.1 HAMAP : Altronate oxidoreductase; KEGG: uxaB, altronate oxidoreductase; PFAM: Mannitol dehydrogenase domain-containing protein, Mannitol dehydrogenase rossman domain-containing protein YP_008521451.1 PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein, SAF domain protein; KEGG: uxaA, altronate hydrolase; SMART: SAF domain protein YP_008521452.1 PFAM: Protein of unknown function, inner membrane,YgjV; KEGG: hypothetical protein YP_008521453.1 KEGG: serine/threonine transporter SstT; HAMAP : Serine/threonine transporter sstT; PFAM: sodium:dicarboxylate symporter YP_008521454.1 KEGG: oxidoreductase domain-containing protein; PFAM: oxidoreductase domain protein YP_008521455.1 HAMAP : Ribosomal RNA large subunit methyltransferase G; KEGG: rRNA (guanine-N(2)-)-methyltransferase; PFAM: methyltransferase small YP_008521456.1 KEGG: hypothetical protein YP_008521457.1 KEGG: Pectate lyase/Amb allergen; PFAM: Pectate lyase/Amb allergen; SMART: Pectate lyase/Amb allergen YP_008521458.1 PFAM: protein of unknown function Spy-related protein; KEGG: hypothetical protein YP_008521459.1 PFAM: Protein of unknown function DUF3315; KEGG: hypothetical protein YP_008521460.1 KEGG: phage protein YP_008521461.1 PFAM: Uracil-DNA glycosylase superfamily; KEGG: G/U mismatch-specific DNA glycosylase YP_008521462.1 KEGG: rpoD, RNA polymerase, sigma 70 (sigma D) factor; TIGRFAM: RNA polymerase sigma factor RpoD, RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 non-essential domain protein, sigma-70 1.1 domain protein, sigma-70 region 2 domain protein, sigma-70 region 4 domain protein, sigma-70 region 1.2, sigma-70 region 3 domain protein YP_008521463.1 TIGRFAM: DNA primase; PFAM: DNA primase catalytic core domain-containing protein, DNA primase DnaG DnaB-binding protein, DNA primase, DnaB-helicase binding domain-containing protein, TOPRIM domain-containing protein; KEGG: DNA primase (bacterial type); SMART: DNA primase DnaG DnaB-binding protein, TOPRIM domain-containing protein YP_008521464.1 TIGRFAM: ribosomal protein S21; HAMAP : 30S ribosomal protein S21; KEGG: SSU ribosomal protein S21P; PFAM: ribosomal protein S21 YP_008521465.1 PFAM: peptidase M22 glycoprotease; TIGRFAM: putative glycoprotease GCP, metalloendopeptidase, glycoprotease family; HAMAP : O-sialoglycoprotein endopeptidase; KEGG: ygjD, peptidase YP_008521466.1 TIGRFAM: arginine repressor; HAMAP : Arginine repressor; KEGG: arginine repressor; PFAM: Arginine repressor, DNA-binding domain, Arginine repressor domain-containing protein YP_008521467.1 PFAM: Lactate/malate dehydrogenase, Lactate/malate dehydrogenase domain-containing protein; TIGRFAM: malate dehydrogenase, NAD-dependent; HAMAP : Malate dehydrogenase; KEGG: malate dehydrogenase YP_008521468.1 KEGG: nlp, regulator for maltose metabolism YP_008521469.1 PFAM: MuA-transposase/repressor protein CI DNA-binding protein; KEGG: MuA-transposase/repressor protein CI YP_008521470.1 PFAM: MuA-transposase/repressor protein CI DNA-binding protein; KEGG: hypothetical protein YP_008521471.1 KEGG: octaprenyl diphosphate synthase; PFAM: Polyprenyl synthetase YP_008521472.1 TIGRFAM: ribosomal protein L21; HAMAP : 50S ribosomal protein L21; KEGG: 50S ribosomal protein L21; PFAM: ribosomal protein L21 YP_008521473.1 TIGRFAM: ribosomal protein L27; HAMAP : 50S ribosomal protein L27; KEGG: rpmA, 50S ribosomal subunit protein L27; PFAM: ribosomal protein L27 YP_008521474.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: hypothetical protein YP_008521475.1 TIGRFAM: GTP-binding protein Obg/CgtA; HAMAP : GTPase obg; KEGG: obgE, GTPase ObgE; PFAM: GTP1/OBG sub domain protein, GTP1/OBG protein YP_008521476.1 TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; KEGG: hypothetical protein; PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C YP_008521477.1 TIGRFAM: transcription elongation factor GreA; HAMAP : Transcription elongation factor greA; KEGG: greA, transcription elongation factor GreA; PFAM: Transcription elongation factor, GreA/GreB, N-terminal, transcription elongation factor GreA/GreB domain-containing protein YP_008521478.1 TIGRFAM: RNA-binding, CRM domain-containing protein; PFAM: protein of unknown function UPF0044; KEGG: hypothetical protein; SMART: protein of unknown function UPF0044 YP_008521479.1 TIGRFAM: ribosomal RNA large subunit methyltransferase J; HAMAP : Ribosomal RNA large subunit methyltransferase E; KEGG: rrmJ, 23S rRNA methyltransferase J; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ YP_008521480.1 KEGG: ftsH, subunit of integral membrane ATP-dependent zinc metallopeptidase; PFAM: peptidase M41, AAA ATPase central domain protein, peptidase M41 FtsH extracellular; TIGRFAM: ATP-dependent metalloprotease FtsH; HAMAP : peptidase M41 FtsH domain protein; SMART: AAA ATPase YP_008521481.1 TIGRFAM: dihydropteroate synthase; KEGG: folP, 7,8-dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS YP_008521482.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I, phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III, phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II, phosphoglucomutase/phosphomannomutase; TIGRFAM: phosphoglucosamine mutase; HAMAP : phosphoglucosamine mutase; KEGG: phosphoglucosamine mutase YP_008521483.1 KEGG: secG, preprotein translocase membrane subunit; TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit YP_008521484.1 PFAM: PilT protein domain protein; KEGG: mvpA, plasmid protein YP_008521485.1 PFAM: protein of unknown function DUF894 DitE; KEGG: transmembrane transport proteins YP_008521486.1 KEGG: hypothetical protein YP_008521487.1 KEGG: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_008521489.1 PFAM: branched-chain amino acid transport; KEGG: hypothetical protein YP_008521490.1 KEGG: hypothetical protein; HAMAP : Ribosome maturation factor rimP; PFAM: protein of unknown function DUF150 YP_008521491.1 TIGRFAM: transcription termination factor NusA; PFAM: NusA domain-containing protein, KH domain, NusA-like, RNA binding S1 domain protein; KEGG: nusA, transcription termination/antitermination L factor; SMART: RNA-binding domain, S1 YP_008521492.1 TIGRFAM: translation initiation factor IF-2, small GTP-binding protein; HAMAP : initiation factor 2; KEGG: infB, translation initiation factor IF-2; PFAM: protein synthesis factor GTP-binding protein, Translation initiation factor IF- 2, domain 3, Initiation factor 2 associated domain protein , translation initiation factor IF-2 domain-containing protein, elongation factor Tu domain 2 protein YP_008521493.1 TIGRFAM: ribosome-binding factor A; HAMAP : Ribosome-binding factor A; KEGG: rbfA, ribosome-binding factor A; PFAM: ribosome-binding factor A YP_008521494.1 TIGRFAM: tRNA pseudouridine synthase B; HAMAP : tRNA pseudouridine synthase B; KEGG: truB, tRNA U55 pseudouridine synthase; PFAM: pseudouridylate synthase TruB domain protein, tRNA pseudouridine synthase B YP_008521495.1 TIGRFAM: ribosomal protein S15; HAMAP : ribosomal protein S15; KEGG: rpsO, 30S ribosomal protein S15; PFAM: ribosomal protein S15 YP_008521496.1 KEGG: polynucleotide phosphorylase/polyadenylase; PFAM: Polynucleotide phosphorylase, phosphorolytic RNA-binding protein, RNA binding S1 domain protein, 3' exoribonuclease, KH type 1 domain protein, Exoribonuclease, phosphorolytic domain 2; TIGRFAM: polyribonucleotide nucleotidyltransferase; HAMAP : Polyribonucleotide nucleotidyltransferase; SMART: RNA-binding domain, S1, KH domain protein YP_008521497.1 PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: nlpI, lipoprotein YP_008521498.1 KEGG: DEAD/DEAH box helicase; PFAM: DEAD/DEAH box helicase domain protein, helicase domain-containing protein, DbpA RNA-binding domain protein; SMART: DEAD-like helicase , helicase domain-containing protein YP_008521499.1 KEGG: hypothetical protein; TIGRFAM: luciferase family oxidoreductase, group 1; PFAM: luciferase family protein YP_008521500.1 PFAM: peptidase U32; KEGG: peptidase U32 YP_008521501.1 PFAM: peptidase U32; KEGG: peptidase U32 YP_008521502.1 PFAM: Sterol-binding domain protein; KEGG: yhbT, lipid carrier protein YP_008521503.1 PFAM: GCN5-related N-acetyltransferase; KEGG: yhbS, acyltransferase with acyl-CoA N-acyltransferase domain YP_008521504.1 KEGG: excinuclease ABC subunit C; HAMAP : UPF0213 protein yhbQ; PFAM: Excinuclease ABC C subunit domain protein YP_008521505.1 KEGG: hypothetical protein YP_008521506.1 KEGG: hypothetical protein YP_008521507.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: autoinducer-2 (AI-2) modifying protein LsrG YP_008521508.1 PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: aldolase YP_008521509.1 PFAM: Periplasmic binding protein domain; KEGG: putative periplasmic solute-binding protein YP_008521510.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: monosaccharide-transporting ATPase YP_008521511.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: ABC transporter permease YP_008521512.1 PFAM: ABC transporter related protein; KEGG: autoinducer 2 (AI-2) ABC transport system, fused AI2 transporter subunits and ATP-binding component; SMART: AAA ATPase YP_008521513.1 PFAM: sugar-binding domain-containing protein; KEGG: ydeW, transcriptional repressor YP_008521514.1 KEGG: autoinducer-2 (AI-2) kinase; PFAM: Carbohydrate kinase, FGGY YP_008521515.1 TIGRFAM: deoxyribose-phosphate aldolase; KEGG: deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase YP_008521516.1 KEGG: thymidine phosphorylase; PFAM: glycosyl transferase family 3, Pyrimidine nucleoside phosphorylase domain-containing protein, Glycosyl transferase, family 3; TIGRFAM: thymidine phosphorylase, pyrimidine-nucleoside phosphorylase; HAMAP : Thymidine phosphorylase; SMART: Pyrimidine nucleoside phosphorylase domain-containing protein YP_008521517.1 PFAM: metalloenzyme domain protein; TIGRFAM: phosphopentomutase; HAMAP : Phosphopentomutase; KEGG: phosphopentomutase YP_008521518.1 PFAM: purine or other phosphorylase family 1; TIGRFAM: purine nucleoside phosphorylase; HAMAP : Purine nucleoside phosphorylase deoD-type; KEGG: purine nucleoside phosphorylase YP_008521519.1 TIGRFAM: ribosomal-protein-alanine acetyltransferase; KEGG: rimI, ribosomal-protein-alanine N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase YP_008521520.1 PFAM: DNA polymerase III psi subunit; KEGG: holD, DNA polymerase III subunit psi YP_008521521.1 HAMAP : Ribosomal RNA small subunit methyltransferase C; KEGG: rRNA (guanine-N(2)-)-methyltransferase; PFAM: methyltransferase small, Methyltransferase small domain protein YP_008521522.1 KEGG: aldo/keto reductase; PFAM: NADP-dependent oxidoreductase domain YP_008521523.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: yhjC, transcriptional regulator YP_008521524.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: LysR family transcriptional regulator YP_008521525.1 KEGG: gamma-aminobutyraldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_008521526.1 KEGG: ydcS, spermidine/putrescine ABC transporter solute-binding protein YP_008521527.1 PFAM: ABC transporter related protein, Transport-associated OB domain-containing protein; KEGG: ydcT, spermidine/putrescine ABC transporter ATPase; SMART: AAA ATPase YP_008521528.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transport systems inner membrane component YP_008521529.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transport systems inner membrane component YP_008521530.1 KEGG: gamma-aminobutyraldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_008521531.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: budR, transcriptional regulator YP_008521532.1 TIGRFAM: alpha-acetolactate decarboxylase; KEGG: alpha-acetolactate decarboxylase; PFAM: alpha-acetolactate decarboxylase YP_008521533.1 TIGRFAM: acetolactate synthase, catabolic; KEGG: budB, acetolactate synthase, catabolic; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein, thiamine pyrophosphate central domain-containing protein YP_008521534.1 TIGRFAM: lactaldehyde reductase; KEGG: L-1,2-propanediol oxidoreductase; PFAM: iron-containing alcohol dehydrogenase YP_008521536.1 PFAM: glycine cleavage T protein (aminomethyl transferase), Glycine cleavage T-protein barrel; TIGRFAM: glycine cleavage system T protein; HAMAP : Aminomethyltransferase; KEGG: gcvT, aminomethyltransferase YP_008521537.1 TIGRFAM: glycine cleavage system H protein; HAMAP : Glycine cleavage system H protein; KEGG: glycine cleavage system protein H; PFAM: glycine cleavage H-protein YP_008521538.1 TIGRFAM: glycine dehydrogenase; HAMAP : Glycine dehydrogenase [decarboxylating]; KEGG: glycine dehydrogenase; PFAM: Glycine cleavage system P-protein YP_008521539.1 PFAM: restriction endonuclease, Restriction system protein Mrr-like N-terminal domain; KEGG: 5-methylcytosine-specific restriction enzyme MRR YP_008521540.1 PFAM: metal-dependent phosphohydrolase HD sub domain-containing protein; KEGG: hypothetical protein YP_008521541.1 KEGG: channel protein, hemolysin III family; TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein YP_008521542.1 TIGRFAM: folate-binding protein YgfZ; HAMAP : tRNA-modifying protein ygfZ; KEGG: ygfZ, folate-dependent regulatory protein; PFAM: glycine cleavage T protein (aminomethyl transferase) YP_008521543.1 PFAM: protein of unknown function DUF339; KEGG: hypothetical protein YP_008521544.1 PFAM: protein of unknown function DUF1434; KEGG: ygfX, hypothetical protein YP_008521545.1 HAMAP : Ribosomal RNA large subunit methyltransferase F; KEGG: SAM-dependent methyltransferase; PFAM: protein of unknown function DUF890 YP_008521546.1 KEGG: flavodoxin; TIGRFAM: flavodoxin; PFAM: flavodoxin/nitric oxide synthase YP_008521547.1 KEGG: metabolite/H+ symporter, major facilitator superfamily (MFS); TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: General substrate transporter, major facilitator superfamily MFS_1 YP_008521548.1 KEGG: aldolase; PFAM: HpcH/HpaI aldolase YP_008521549.1 PFAM: major facilitator superfamily MFS_1; KEGG: inner membrane transport protein YfaV YP_008521550.1 SMART: Mandelate racemase/muconate lactonizing protein; HAMAP : L-rhamnonate dehydratase; KEGG: MR-MLE-family protein; PFAM: Mandelate racemase/muconate lactonizing protein YP_008521551.1 KEGG: transcriptional regulator YfaX; PFAM: Transcriptional regulator IclR , regulatory protein IclR; SMART: regulatory protein IclR YP_008521552.1 TIGRFAM: tyrosine recombinase XerD; HAMAP : Tyrosine recombinase xerC, Tyrosine recombinase xerD; KEGG: site-specific tyrosine recombinase XerD; PFAM: integrase family protein, integrase domain protein SAM domain protein YP_008521553.1 PFAM: Thioredoxin-like fold-containing protein, Disulfide bond isomerase, DsbC/G; KEGG: dsbC, protein disulfide isomerase II YP_008521554.1 KEGG: recJ, ssDNA exonuclease, 5' --> 3'-specific; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein, phosphoesterase DHHA1 YP_008521555.1 TIGRFAM: peptide chain release factor 2; PFAM: Class I peptide chain release factor, PCRF domain protein; KEGG: prfB, peptide chain release factor 2; SMART: PCRF domain protein YP_008521556.1 PFAM: tRNA synthetase class II (D K and N), nucleic acid binding OB-fold tRNA/helicase-type; TIGRFAM: lysyl-tRNA synthetase; HAMAP : Lysyl-tRNA synthetase; KEGG: lysS, lysyl-tRNA synthetase YP_008521557.1 KEGG: hypothetical protein YP_008521558.1 KEGG: cold-shock protein; PFAM: Cold-shock protein DNA-binding protein; SMART: Cold shock protein YP_008521559.1 PFAM: helix-turn-helix HxlR type; KEGG: HxlR family transcriptional regulator YP_008521560.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; KEGG: rfbB, dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase YP_008521561.1 TIGRFAM: glucose-1-phosphate thymidylyltransferase; KEGG: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase YP_008521562.1 TIGRFAM: dTDP-4-dehydrorhamnose reductase; KEGG: rmlD, dTDP-6-deoxy-L-mannose-dehydrogenase; PFAM: dTDP-4-dehydrorhamnose reductase YP_008521563.1 TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; KEGG: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related protein YP_008521564.1 TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II, Nucleotidyl transferase YP_008521565.1 KEGG: phosphomannomutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I, phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II, phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III, phosphoglucomutase/phosphomannomutase YP_008521566.1 PFAM: ABC-2 type transporter; KEGG: hypothetical protein YP_008521567.1 PFAM: ABC transporter related protein; KEGG: wzt, ABC subunit of A-band LPS efflux transporter; SMART: AAA ATPase YP_008521568.1 KEGG: hypothetical protein YP_008521569.1 KEGG: hypothetical protein YP_008521571.1 TIGRFAM: CDP-glucose 4,6-dehydratase; KEGG: h16_A2896, NAD dependent sugar epimerase; PFAM: NAD-dependent epimerase/dehydratase YP_008521572.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: h16_A2895, nucleoside-diphosphate-sugar epimerase YP_008521573.1 PFAM: glycosyl transferase family 2; KEGG: wcaA, cell wall biogenesis glycosyltransferase YP_008521574.1 TIGRFAM: glucose-1-phosphate cytidylyltransferase; KEGG: rfbF, glucose-1-phosphate cytidylyltransferase; PFAM: Nucleotidyl transferase YP_008521575.1 KEGG: h16_A2892, hypothetical protein; TIGRFAM: Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD; PFAM: Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD YP_008521576.1 PFAM: amine oxidase; KEGG: hypothetical protein YP_008521577.1 KEGG: hypothetical protein YP_008521578.1 KEGG: hypothetical protein YP_008521579.1 PFAM: IS66 Orf2 family protein; KEGG: hypothetical protein YP_008521580.1 PFAM: Transposase IS66, predicted helix-turn-helix domain, Transposase TnpC, homeodomain, transposase IS66; KEGG: hypothetical protein YP_008521581.1 PFAM: transposase IS66; KEGG: hypothetical protein YP_008521582.1 PFAM: C-methyltransferase, Methyltransferase domain protein; KEGG: NDP-hexose 3-C-methyltransferase TylCIII YP_008521583.1 PFAM: glycosyl transferase family 2; KEGG: glycosyl transferase family protein YP_008521584.1 PFAM: glycosyl transferase group 1, methyltransferase FkbM domain protein, glycosyl transferase family 2; KEGG: glycosyltransferase YP_008521586.1 TIGRFAM: GDP-mannose 4,6-dehydratase; KEGG: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase YP_008521587.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: NAD-dependent epimerase/dehydratase YP_008521588.1 PFAM: glycosyl transferase group 1; KEGG: group 1 glycosyl transferase; overlaps another CDS with the same product name YP_008521589.1 PFAM: glycosyl transferase group 1; KEGG: glycosyl transferase group 1; overlaps another CDS with the same product name YP_008521590.1 KEGG: glycerol-3-phosphate-binding periplasmic protein YP_008521591.1 PFAM: ABC transporter related protein, Transport-associated OB domain-containing protein; KEGG: ABC transporter; SMART: AAA ATPase YP_008521592.1 KEGG: metallophosphoesterase; HAMAP : 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA; PFAM: metallophosphoesterase YP_008521593.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transport system inner membrane protein YP_008521594.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transporters inner membrane component YP_008521595.1 KEGG: lipid A biosynthesis palmitoleoyl acyltransferase; TIGRFAM: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase; PFAM: lipid A biosynthesis acyltransferase YP_008521597.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: Xanthine/uracil/vitamin C permease YP_008521598.1 KEGG: sodium/hydrogen exchanger family protein; TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger YP_008521599.1 PFAM: AMP-dependent synthetase and ligase, Domain of unknown function DUF4009, Acyl-CoA synthase, domain of unknown function DUF3448; TIGRFAM: acetate/CoA ligase; HAMAP : Acetyl-coenzyme A synthetase; KEGG: acetate/CoA ligase YP_008521600.1 KEGG: rsmC, global regulatory protein RsmC YP_008521601.1 PFAM: Glyoxalase-like domain; KEGG: hypothetical protein YP_008521602.1 PFAM: protein of unknown function UPF0118; KEGG: membrane protein YP_008521603.1 KEGG: togT, oligogalacturonide transporter YP_008521604.1 SMART: helix-turn-helix domain protein; KEGG: XRE family transcriptional regulator YP_008521605.1 KEGG: Fructuronate reductase; PFAM: Mannitol dehydrogenase domain-containing protein, Mannitol dehydrogenase rossman domain-containing protein YP_008521606.1 KEGG: multidrug resistance protein B; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_008521607.1 PFAM: secretion protein HlyD family protein; KEGG: tripartite multidrug resistance system membrane protein YP_008521608.1 SMART: regulatory protein MarR; KEGG: MarR family transcriptional regulator YP_008521609.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: ErfK/YbiS/YcfS/YnhG family protein YP_008521610.1 SMART: Pyruvate-flavodoxin oxidoreductase, EKR domain-containing protein; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein, Pyruvate/ketoisovalerate oxidoreductase, Pyruvate-flavodoxin oxidoreductase, EKR domain-containing protein, 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein, thiamine pyrophosphate TPP-binding domain-containing protein YP_008521611.1 KEGG: hypothetical protein YP_008521612.1 PFAM: GCN5-related N-acetyltransferase; KEGG: acetyltransferase YP_008521613.1 KEGG: amino acid ABC transporter substrate-binding portion; PFAM: ABC-type transporter, periplasmic subunit family 3; SMART: ABC-type transporter, periplasmic subunit family 3 YP_008521614.1 KEGG: amino acid ABC transporter permease; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: ABC-type transporter, integral membrane subunit YP_008521615.1 KEGG: amino acid ABC transporter permease; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: ABC-type transporter, integral membrane subunit YP_008521616.1 PFAM: ABC transporter related protein; KEGG: ABC transporter-like protein; SMART: AAA ATPase YP_008521617.1 PFAM: Endoribonuclease L-PSP; KEGG: endoribonuclease L-PSP YP_008521618.1 KEGG: putative transcriptional regulator; PFAM: regulatory protein IclR, Transcriptional regulator IclR; SMART: regulatory protein IclR YP_008521619.1 PFAM: D-serine dehydratase-like domain, alanine racemase domain protein; KEGG: hypothetical protein YP_008521620.1 PFAM: DinI family protein; KEGG: DinI family protein YP_008521621.1 KEGG: Glyoxalase/bleomycin resistance protein/dioxygenase YP_008521622.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: LysR family transcriptional regulator YP_008521623.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: Short-chain dehydrogenase/reductase SDR YP_008521624.1 KEGG: TIM-barrel fold metal-dependent hydrolase; PFAM: amidohydrolase 2 YP_008521625.1 KEGG: hypothetical protein YP_008521626.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: hypothetical protein YP_008521627.1 KEGG: putative transposase YP_008521628.1 PFAM: D-alanine--D-alanine ligase domain protein; TIGRFAM: D-alanine/D-alanine ligase; HAMAP : D-alanine--D-alanine ligase; KEGG: D-alanine/D-alanine ligase YP_008521629.1 KEGG: XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_008521630.1 PFAM: sugar isomerase (SIS), helix-turn-helix protein RpiR; KEGG: RpiR family transcriptional regulator YP_008521631.1 TIGRFAM: methylmalonate-semialdehyde dehydrogenase; KEGG: aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_008521632.1 KEGG: thiamine pyrophosphate TPP binding domain-containing protein; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein, thiamine pyrophosphate central domain-containing protein YP_008521633.1 KEGG: Inositol 2-dehydrogenase; PFAM: oxidoreductase domain protein, Oxidoreductase domain-containing protein YP_008521634.1 PFAM: Periplasmic binding protein domain; KEGG: periplasmic binding protein/LacI transcriptional regulator YP_008521635.1 PFAM: ABC transporter related protein; KEGG: sugar ABC transporter ATP-binding protein; SMART: AAA ATPase YP_008521636.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: hypothetical protein YP_008521637.1 PFAM: oxidoreductase domain protein, Oxidoreductase domain-containing protein; KEGG: oxidoreductase domain-containing protein YP_008521638.1 KEGG: Fructokinase-1; PFAM: Protein of unknown function DUF2090, PfkB domain protein YP_008521639.1 KEGG: Myo-inosose-2 dehydratase; PFAM: Xylose isomerase domain-containing protein TIM barrel YP_008521640.1 PFAM: KduI/IolB isomerase; KEGG: Myo-inositol catabolism IolB domain-containing protein YP_008521641.1 TIGRFAM: lytic murein transglycosylase B; KEGG: murein hydrolase B YP_008521642.1 PFAM: Molybdenum cofactor biosynthesis protein F; KEGG: molybdenum cofactor biosynthesis protein F YP_008521643.1 KEGG: 3-oxoacyl-(acyl-carrier-protein) reductase; SMART: Polyketide synthase/Fatty acid synthase, KR YP_008521644.1 PFAM: Protein of unknown function DUF3156; KEGG: Protein of unknown function (DUF3156) YP_008521645.1 KEGG: amino acid permease YP_008521646.1 KEGG: LuxR family transcriptional regulator; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR YP_008521648.1 PFAM: protein of unknown function DUF861 cupin 3; KEGG: hypothetical protein YP_008521649.1 PFAM: FAD dependent oxidoreductase; KEGG: FAD dependent oxidoreductase YP_008521650.1 KEGG: hypothetical protein; PFAM: Helix-turn-helix, AraC domain-containing protein; SMART: Helix-turn-helix, AraC domain-containing protein YP_008521651.1 KEGG: PA-phosphatase-like phosphoesterase; PFAM: phosphoesterase PA-phosphatase related protein; SMART: phosphoesterase PA-phosphatase related protein YP_008521652.1 PFAM: SNARE associated protein; KEGG: DedA family integral membrane protein YghB YP_008521653.1 KEGG: two component transcriptional regulator; PFAM: response regulator receiver, transcriptional regulator domain-containing protein; SMART: response regulator receiver, transcriptional regulator domain-containing protein YP_008521654.1 KEGG: periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein, histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein YP_008521655.1 KEGG: type 12 methyltransferase YP_008521656.1 KEGG: methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer, 4HB MCP domain, histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer YP_008521657.1 PFAM: Periplasmic binding protein domain; KEGG: LacI family transcriptional regulator YP_008521658.1 PFAM: Prophage CP4-57 regulatory; KEGG: AlpA family phage transcriptional regulator YP_008521659.1 KEGG: hypothetical protein YP_008521660.1 KEGG: hypothetical protein YP_008521661.1 KEGG: hypothetical protein YP_008521662.1 KEGG: hypothetical protein YP_008521663.1 KEGG: lipoprotein YP_008521664.1 KEGG: hypothetical protein YP_008521667.1 PFAM: MobA/MobL protein; KEGG: MobA/MobL protein YP_008521668.1 KEGG: hypothetical protein YP_008521669.1 PFAM: Conjugal transfer TraD family protein; KEGG: conjugal transfer protein TraD YP_008521670.1 KEGG: hypothetical protein YP_008521671.1 PFAM: shufflon domain protein; KEGG: type IV prepilin YP_008521672.1 PFAM: shufflon domain protein; KEGG: Large exoprotein involved in heme utilization or adhesion YP_008521673.1 KEGG: reverse transcriptase; PFAM: RNA-directed DNA polymerase (Reverse transcriptase) YP_008521674.1 KEGG: hypothetical protein YP_008521675.1 PFAM: Domain of unknown function DUF4102, integrase family protein; KEGG: putative prophage integrase YP_008521676.1 TIGRFAM: SsrA-binding protein; HAMAP : SsrA-binding protein; KEGG: SsrA-binding protein; PFAM: SmpB protein YP_008521677.1 PFAM: cyclase/dehydrase; KEGG: hypothetical protein YP_008521678.1 KEGG: yfjF, hypothetical protein; HAMAP : Protein rnfH; PFAM: protein of unknown function UPF0125 YP_008521679.1 KEGG: SmpA/OmlA domain-containing protein; HAMAP : Outer membrane protein assembly factor BamE; PFAM: SmpA/OmlA domain-containing protein YP_008521680.1 KEGG: recN, recombination and repair protein; TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein YP_008521681.1 KEGG: ATP-NAD/AcoX kinase; HAMAP : inorganic polyphosphate/ATP-NAD kinase; PFAM: ATP-NAD/AcoX kinase YP_008521682.1 KEGG: heat shock protein GrpE; HAMAP : Protein grpE; PFAM: GrpE protein YP_008521683.1 TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; HAMAP : Manganese transport protein mntH; KEGG: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein YP_008521684.1 KEGG: NUDIX hydrolase; TIGRFAM: nucleoside diphosphate pyrophosphatase; PFAM: NUDIX hydrolase YP_008521685.1 TIGRFAM: transaldolase; HAMAP : Transaldolase; KEGG: transaldolase; PFAM: Transaldolase YP_008521686.1 KEGG: malic enzyme; PFAM: phosphate acetyl/butaryl transferase, malic protein NAD-binding protein, malic protein domain protein; SMART: malic protein NAD-binding protein YP_008521687.1 KEGG: hypothetical protein; HAMAP : UPF0178 protein yaiI; PFAM: protein of unknown function DUF188 YP_008521688.1 HAMAP : Coproporphyrinogen-III oxidase, aerobic; KEGG: Coproporphyrinogen oxidase; PFAM: coproporphyrinogen III oxidase YP_008521689.1 KEGG: GCN5-like N-acetyltransferase; HAMAP : Acetyltransferase ypeA; PFAM: GCN5-related N-acetyltransferase YP_008521690.1 PFAM: protein of unknown function DUF1131; KEGG: hypothetical protein YP_008521691.1 KEGG: Dyp-type peroxidase family; TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase YP_008521692.1 PFAM: MacB-like periplasmic core domain, protein of unknown function DUF214, ABC transporter related protein; KEGG: ABC transporter; SMART: AAA ATPase YP_008521693.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: RND family efflux transporter MFP subunit YP_008521694.1 KEGG: winged helix family two component transcriptional regulator; PFAM: response regulator receiver, transcriptional regulator domain-containing protein; SMART: response regulator receiver, transcriptional regulator domain-containing protein YP_008521695.1 KEGG: two-component system sensor kinase; PFAM: ATP-binding region ATPase domain protein, histidine kinase HAMP region domain protein, histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein, histidine kinase HAMP region domain protein YP_008521696.1 KEGG: PTS system glucose-specific transporter; TIGRFAM: PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease EIIA 1 domain-containing protein YP_008521697.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; KEGG: ptsI, phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein, PEP-utilising protein domain protein, PEP-utilising protein mobile region YP_008521698.1 KEGG: phosphotransferase system HPr (HPr) family protein; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr YP_008521699.1 TIGRFAM: cysteine synthase A, cysteine synthase; KEGG: cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_008521700.1 KEGG: cysZ, sulfate transport protein CysZ YP_008521701.1 SMART: ZipA FtsZ-binding region protein; TIGRFAM: cell division protein ZipA; KEGG: cell division protein ZipA; HAMAP : Cell division protein zipA-like protein; PFAM: ZipA FtsZ-binding region protein YP_008521702.1 KEGG: asoB, hypothetical protein YP_008521703.1 PFAM: protein of unknown function DUF526; KEGG: hypothetical protein YP_008521704.1 TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; HAMAP : 3,4-dihydroxy-2-butanone 4-phosphate synthase; KEGG: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase YP_008521705.1 KEGG: tehB, tellurite resistance protein tehB; TIGRFAM: tellurite resistance protein TehB; PFAM: Tellurite resistance methyltransferase, TehB, core, protein of unknown function DUF1971 YP_008521706.1 TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit, hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; KEGG: hydro-lyase, Fe-S type, tartrate/fumarate subfamily subunit beta; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region, Fe-S type hydro-lyase tartrate/fumarate beta region YP_008521707.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: lysR-family transcriptional regulatory protein YP_008521708.1 PFAM: transmembrane pair domain-containing protein; KEGG: transmembrane pair domain-containing protein YP_008521709.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: alkB, alkylated DNA repair protein alkB YP_008521710.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: galactonate dehydratase; SMART: Mandelate racemase/muconate lactonizing protein YP_008521711.1 KEGG: rspB, starvation sensing zinc-binding dehydrogenase; PFAM: Alcohol dehydrogenase GroES domain protein, Alcohol dehydrogenase zinc-binding domain protein YP_008521712.1 PFAM: major facilitator superfamily MFS_1; KEGG: major facilitator superfamily protein YP_008521713.1 KEGG: malate/lactate dehydrogenase; PFAM: Malate/L-lactate dehydrogenase YP_008521714.1 KEGG: hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00022; PFAM: Conserved hypothetical protein CHP00022 YP_008521715.1 KEGG: ydfI, D-mannonate oxidoreductase; PFAM: Mannitol dehydrogenase domain-containing protein, Mannitol dehydrogenase rossman domain-containing protein YP_008521716.1 HAMAP : Uronate isomerase; KEGG: glucuronate isomerase; PFAM: Glucuronate isomerase YP_008521718.1 KEGG: hypothetical protein YP_008521719.1 KEGG: GntR family transcriptional regulator; PFAM: GntR domain protein, regulatory protein GntR HTH; SMART: regulatory protein GntR HTH, GntR domain protein YP_008521720.1 KEGG: ydfZ, hypothetical protein; TIGRFAM: selenium-binding protein YdfZ; PFAM: selenium-binding protein YdfZ YP_008521721.1 KEGG: LacI family transcriptional regulator; PFAM: regulatory protein LacI; SMART: regulatory protein LacI YP_008521722.1 KEGG: metal-dependent hydrolases of the beta-lactamase superfamily III YP_008521723.1 PFAM: ABC transporter related protein; KEGG: ABC transporter; SMART: AAA ATPase YP_008521724.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transporter inner membrane component YP_008521725.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transporter inner membrane component YP_008521726.1 PFAM: extracellular solute-binding protein family 1; KEGG: family 1 extracellular solute-binding protein YP_008521727.1 PFAM: major facilitator superfamily MFS_1; KEGG: major facilitator superfamily protein YP_008521728.1 TIGRFAM: tartrate dehydrogenase; KEGG: tartrate dehydrogenase; PFAM: Isopropylmalate dehydrogenase-like domain YP_008521729.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: Positive regulator of Tartrate dehydrogenase/decarboxylase/D-malic enzyme YP_008521730.1 PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; TIGRFAM: 7-cyano-7-deazaguanine reductase; HAMAP : NADPH-dependent 7-cyano-7-deazaguanine reductase; KEGG: queF, NADPH dependent preQ0 reductase YP_008521731.1 KEGG: hypothetical protein; TIGRFAM: protein of unknown function DUF165; PFAM: protein of unknown function DUF165 YP_008521732.1 SMART: helix-turn-helix domain protein; KEGG: XRE family transcriptional regulator YP_008521733.1 PFAM: Rhamnogalacturonate lyase; KEGG: rhiE, Rhamnogalacturonate lyase YP_008521734.1 PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: taurine catabolism dioxygenase TauD/TfdA YP_008521735.1 KEGG: AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase YP_008521736.1 PFAM: Thermostable hemolysin; KEGG: hypothetical protein YP_008521737.1 KEGG: Bcr/CflA subfamily drug resistance transporter; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1 YP_008521738.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: LysR family transcriptional regulator YP_008521739.1 PFAM: Ferric reductase domain protein transmembrane component domain-containing protein, oxidoreductase FAD/NAD(P)-binding domain protein, FAD-binding 8 domain protein; KEGG: ferric reductase domain-containing transmembrane protein YP_008521740.1 SMART: cation transporting ATPase domain protein; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; KEGG: cation-transporting ATPase; PFAM: E1-E2 ATPase-associated domain protein, cation transporting ATPase domain protein, Haloacid dehalogenase domain protein hydrolase YP_008521741.1 KEGG: Co/Zn/Cd cation transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein YP_008521742.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: cytosine/purines uracil thiamine allantoin permease YP_008521743.1 KEGG: LuxR family transcriptional regulator; PFAM: regulatory protein LuxR, PAS fold-4 domain protein; SMART: regulatory protein LuxR YP_008521744.1 PFAM: GCN5-related N-acetyltransferase; KEGG: acetyltransferase YP_008521745.1 PFAM: protein of unknown function DUF81; KEGG: hypothetical protein YP_008521746.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: hypothetical protein YP_008521747.1 PFAM: Domain of unknown function DUF4341, protein of unknown function DUF395 YeeE/YedE; KEGG: hypothetical protein YP_008521748.1 SMART: regulatory protein ArsR; KEGG: ArsR family transcriptional regulator YP_008521749.1 KEGG: metallo-beta-lactamase superfamily protein; PFAM: beta-lactamase domain protein; SMART: beta-lactamase domain protein YP_008521750.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain, FAD-dependent pyridine nucleotide-disulfide oxidoreductase, pyridine nucleotide-disulfide oxidoreductase dimerization region, Rhodanese-like protein; KEGG: FAD-dependent pyridine nucleotide-disulfide oxidoreductase; SMART: Rhodanese-like protein YP_008521751.1 KEGG: isovaleryl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase domain-containing protein YP_008521752.1 KEGG: fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein YP_008521753.1 KEGG: Pyruvate, water dikinasease; PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding protein, PEP-utilising protein mobile region YP_008521754.1 KEGG: hypothetical protein YP_008521755.1 KEGG: Acetylornithine transaminase; PFAM: aminotransferase class-III YP_008521756.1 PFAM: O-methyltransferase family 2; KEGG: O-methyltransferase family 2 YP_008521757.1 KEGG: pigG, peptidyl carrier protein YP_008521758.1 KEGG: Glycine C-acetyltransferase; PFAM: aminotransferase class I and II, acyl carrier protein familyprotein YP_008521759.1 KEGG: D-alanine--poly(phosphoribitol) ligase; PFAM: AMP-dependent synthetase and ligase YP_008521760.1 PFAM: Beta-ketoacyl synthase; KEGG: Beta-ketoacyl-acyl-carrier-protein synthase I; SMART: Polyketide synthase, beta-ketoacyl synthase region-containing protein YP_008521761.1 PFAM: REDY-like protein HapK; KEGG: RedY-like protein YP_008521762.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: hypothetical protein YP_008521763.1 KEGG: pigM, prodigiosin biosynthesis protein PigM YP_008521764.1 PFAM: protein of unknown function DUF1295; KEGG: hypothetical protein YP_008521765.1 KEGG: hypothetical protein; TIGRFAM: Uncharacterized protein family UPF0066; PFAM: Uncharacterized protein family UPF0066 YP_008521766.1 PFAM: protein of unknown function DUF364; KEGG: hypothetical protein YP_008521767.1 PFAM: Tryptophan/tyrosine permease; KEGG: Amino acid transporter transmembrane YP_008521768.1 KEGG: drug/metabolite transporter permease YP_008521769.1 SMART: helix-turn-helix domain protein; KEGG: hypothetical protein YP_008521770.1 PFAM: HipA domain protein; KEGG: HipA protein YP_008521771.1 PFAM: Cl- channel voltage-gated family protein; KEGG: chloride channel protein YP_008521772.1 PFAM: O-methyltransferase family 3; KEGG: O-methyltransferase YP_008521773.1 KEGG: hypothetical protein YP_008521774.1 TIGRFAM: glutamate decarboxylase; KEGG: glutamate decarboxylase; PFAM: Pyridoxal-dependent decarboxylase YP_008521775.1 PFAM: YidE/YbjL duplication domain-containing protein; KEGG: hypothetical protein YP_008521776.1 PFAM: Heme peroxidase; TIGRFAM: catalase/peroxidase HPI; HAMAP : Catalase-peroxidase; KEGG: catalase/peroxidase HPI YP_008521777.1 HAMAP : HTH-type transcriptional regulator malT; PFAM: regulatory protein LuxR; KEGG: transcriptional regulator MalT; SMART: regulatory protein LuxR YP_008521778.1 KEGG: glycogen/starch/alpha-glucan phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35 YP_008521779.1 TIGRFAM: 4-alpha-glucanotransferase; KEGG: malQ, 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77 YP_008521780.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: maltose/maltodextrin ABC transporter, permease protein MalG YP_008521781.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: malF, maltose transporter membrane protein YP_008521782.1 KEGG: maltose-binding periplasmic protein YP_008521784.1 PFAM: ABC transporter related protein, Transport-associated OB domain-containing protein; KEGG: sugar ABC transporter ATPase; SMART: AAA ATPase YP_008521785.1 KEGG: porin; HAMAP : Maltoporin; PFAM: porin LamB type YP_008521786.1 PFAM: Maltose operon periplasmic; KEGG: Maltose operon periplasmic protein precursor (MalM) YP_008521787.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: LysR family transcriptional regulator YP_008521788.1 KEGG: hypothetical protein YP_008521789.1 KEGG: hypothetical protein YP_008521790.1 KEGG: beta-lactamase domain-containing protein; PFAM: beta-lactamase domain protein; SMART: beta-lactamase domain protein YP_008521791.1 TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; KEGG: glycoside/pentoside/hexuronide transporter YP_008521792.1 PFAM: glycoside hydrolase family 31, Glycoside hydrolase family 31, N-terminal domain; KEGG: family 31 glycosyl hydrolase, alpha-glucosidase YP_008521793.1 KEGG: transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_008521794.1 KEGG: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein YP_008521795.1 KEGG: UbiD family decarboxylase; TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein YP_008521796.1 KEGG: 4-hydroxybenzoate decarboxylase subunit D KdpD YP_008521797.1 PFAM: NUDIX hydrolase; TIGRFAM: isopentenyl-diphosphate delta-isomerase, type 1; HAMAP : Isopentenyl-diphosphate Delta-isomerase; KEGG: idi, isopentenyl diphosphate isomerase YP_008521798.1 PFAM: PrpF protein; KEGG: hypothetical protein YP_008521799.1 KEGG: 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase; TIGRFAM: 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase; PFAM: Dimethylmenaquinone methyltransferase YP_008521800.1 PFAM: LmbE family protein; KEGG: LmbE family protein YP_008521801.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: transcriptional regulator, LysR family YP_008521802.1 PFAM: major facilitator superfamily MFS_1; KEGG: major facilitator superfamily MFS_1 YP_008521803.1 KEGG: protocatechuate 4,5-dioxygenase; PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B, Extradiol ring-cleavage dioxygenase LigAB LigA subunit YP_008521804.1 PFAM: monooxygenase FAD-binding protein, Phenol hydroxylase domain protein dimerization; KEGG: 2-polyprenyl-6-methoxyphenol 4-hydroxylase YP_008521805.1 PFAM: Negative transcriptional regulator; KEGG: FMN-binding negative transcriptional regulator YP_008521806.1 TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein, histidine kinase A domain protein, histidine kinase HAMP region domain protein; KEGG: cusS, heavy metal sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein, histidine kinase HAMP region domain protein YP_008521807.1 TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver, transcriptional regulator domain-containing protein; KEGG: winged helix family two component transcriptional regulator; SMART: response regulator receiver, transcriptional regulator domain-containing protein YP_008521808.1 KEGG: hypothetical protein YP_008521809.1 PFAM: Di-heme cytochrome, transmembrane; KEGG: HupC/HyaC/HydC family protein YP_008521810.1 PFAM: oxidoreductase molybdopterin binding protein; KEGG: molybdopterin-binding oxidoreductase YP_008521811.1 KEGG: NIPSNAP domain-containing protein YP_008521812.1 PFAM: transposase IS3/IS911 family protein; KEGG: transposase IS3/IS911 family protein YP_008521813.1 KEGG: LuxR family transcriptional regulator; PFAM: Autoinducer-binding domain protein, regulatory protein LuxR; SMART: regulatory protein LuxR YP_008521814.1 KEGG: autoinducer synthesis protein; PFAM: autoinducer synthesis protein YP_008521815.1 PFAM: IS1 transposase; KEGG: insertion element iso-IS1n protein insB YP_008521816.1 PFAM: ABC transporter related protein; KEGG: ABC transporter; SMART: AAA ATPase YP_008521817.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: transport system permease YP_008521818.1 PFAM: ABC-type transporter, periplasmic subunit; KEGG: iron complex transport system substrate-binding protein YP_008521819.1 PFAM: GCN5-related N-acetyltransferase; KEGG: putative acetyl transferase YP_008521820.1 KEGG: hypothetical protein; TIGRFAM: Protein of unknown function, RAQPRD; PFAM: Protein of unknown function, RAQPRD YP_008521821.1 KEGG: helicase IV YP_008521822.1 KEGG: hypothetical protein YP_008521823.1 PFAM: BetR domain protein, response regulator receiver; KEGG: BetR domain protein YP_008521824.1 KEGG: hypothetical protein YP_008521825.1 KEGG: hypothetical protein YP_008521826.1 KEGG: integral membrane sensor hybrid histidine kinase YP_008521827.1 KEGG: integral membrane sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein, response regulator receiver; SMART: ATP-binding region ATPase domain protein YP_008521828.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: short-chain dehydrogenase YP_008521829.1 PFAM: CcdB protein; KEGG: plasmid maintenance protein CcdB YP_008521830.1 PFAM: Post-segregation antitoxin CcdA; KEGG: plasmid maintenance protein CcdA YP_008521833.1 KEGG: hypothetical protein YP_008521834.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: filamentation induced by cAMP protein fic YP_008521835.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: LysR family transcriptional regulator YP_008521836.1 PFAM: major facilitator superfamily MFS_1; KEGG: major facilitator transporter YP_008521837.1 KEGG: alpha/beta superfamily hydrolase YP_008521838.1 KEGG: hypothetical protein YP_008521839.1 KEGG: NADH-dependent butanol dehydrogenase A; PFAM: iron-containing alcohol dehydrogenase YP_008521840.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: cupin YP_008521841.1 KEGG: alcohol dehydrogenase GroES domain-containing protein YP_008521842.1 KEGG: hypothetical protein YP_008521843.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: NAD(P)H dehydrogenase (quinone) YP_008521844.1 PFAM: protein of unknown function DUF1330; KEGG: hypothetical protein YP_008521845.1 KEGG: iron-containing alcohol dehydrogenase; PFAM: iron-containing alcohol dehydrogenase YP_008521846.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: LysR family transcriptional regulator YP_008521847.1 PFAM: Domain of unknown function DUF4102; KEGG: Integrase YP_008521848.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: hypothetical protein YP_008521849.1 KEGG: dnaB2, replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein YP_008521850.1 TIGRFAM: Integrating conjugative element, PFGI-1, ParB; KEGG: hypothetical protein YP_008521851.1 TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family; KEGG: hypothetical protein YP_008521852.1 PFAM: Domain of unknown function DUF2786; KEGG: hypothetical protein YP_008521854.1 PFAM: Protein of unknown function DUF2857; KEGG: hypothetical protein YP_008521855.1 KEGG: hypothetical protein YP_008521856.1 KEGG: hypothetical protein YP_008521857.1 KEGG: hypothetical protein; TIGRFAM: integrating conjugative element protein, PFL_4669 family; PFAM: Domain of unknown function DUF1845 YP_008521858.1 SMART: DNA topoisomerase I DNA-binding protein, DNA topoisomerase I ATP-binding protein, TOPRIM domain-containing protein; TIGRFAM: DNA topoisomerase III; KEGG: DNA topoisomerase III; PFAM: DNA topoisomerase type IA central domain protein, TOPRIM domain-containing protein, DNA topoisomerase type IA zn finger domain protein YP_008521859.1 PFAM: Protein of unknown function DUF3577; KEGG: hypothetical protein YP_008521860.1 KEGG: single-stranded DNA-binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n YP_008521861.1 PFAM: protein of unknown function DUF29; KEGG: hypothetical protein YP_008521862.1 KEGG: pilus biogenesis protein; TIGRFAM: Integrating conjugative element protein PilL, PFGI-1; PFAM: Toxin co-regulated pilus biosynthesis protein Q YP_008521863.1 PFAM: PilM inner membrane family protein; KEGG: PilM protein YP_008521864.1 KEGG: hypothetical protein; TIGRFAM: type IVB pilus formation outer membrane protein, R64 PilN family; PFAM: type II and III secretion system protein, Secretin domain protein YP_008521865.1 PFAM: Pilin accessory family protein; KEGG: pilin accessory protein PilO YP_008521866.1 TIGRFAM: type IV pilus biogenesis protein PilP; KEGG: hypothetical protein YP_008521867.1 PFAM: type II secretion system protein E; KEGG: hypothetical protein YP_008521868.1 PFAM: Type II secretion system F domain-containing protein; KEGG: hypothetical protein YP_008521869.1 PFAM: PilS domain-containing protein; KEGG: hypothetical protein YP_008521870.1 PFAM: Lytic transglycosylase catalytic; KEGG: PilT protein YP_008521871.1 PFAM: peptidase A24A prepilin type IV; KEGG: type IV prepilin peptidase YP_008521872.1 PFAM: shufflon domain protein; KEGG: shufflon protein YP_008521873.1 KEGG: hypothetical protein YP_008521874.1 TIGRFAM: integrating conjugative element protein, PFL_4693 family; KEGG: hypothetical protein YP_008521875.1 PFAM: Lytic transglycosylase catalytic; KEGG: transglycosylase YP_008521876.1 KEGG: hypothetical protein; TIGRFAM: integrating conjugative element protein, PFL_4695 family; PFAM: Protein of unknown function DUF2859 YP_008521877.1 PFAM: restriction endonuclease; KEGG: restriction endonuclease YP_008521878.1 TIGRFAM: conjugative coupling factor TraD, PFGI-1 class, conjugative coupling factor TraD, SXT/TOL subfamily; KEGG: TraG-family protein YP_008521879.1 KEGG: putative inner membrane protein; TIGRFAM: integrating conjugative element membrane protein, PFL_4697 family; PFAM: Integrating conjugative element protein, PFL4697, membrane YP_008521880.1 PFAM: Transcriptional activator PerC/bacteriophage SfV Orf40; KEGG: PerC family transcriptional regulator YP_008521881.1 KEGG: hypothetical protein YP_008521882.1 KEGG: hypothetical protein; TIGRFAM: Protein of unknown function, RAQPRD; PFAM: Protein of unknown function, RAQPRD YP_008521883.1 KEGG: hypothetical protein; TIGRFAM: integrating conjugative element protein, PFL_4701 family; PFAM: Protein of unknown function DUF3262 YP_008521884.1 KEGG: hypothetical protein; TIGRFAM: integrating conjugative element membrane protein, PFL_4702 family; PFAM: Protein of unknown function DUF2976 YP_008521885.1 KEGG: hypothetical protein; TIGRFAM: conjugative transfer region protein, TIGR03750 family; PFAM: Protein of unknown function DUF3487 YP_008521886.1 KEGG: hypothetical protein; TIGRFAM: integrating conjugative element protein, PFL_4703 family; PFAM: Protein of unknown function DUF2895 YP_008521887.1 KEGG: hypothetical protein; TIGRFAM: integrating conjugative element protein, PFL_4704 family; PFAM: Protein of unknown function DUF3438 YP_008521888.1 TIGRFAM: integrating conjugative element protein, PFL_4705 family; KEGG: hypothetical protein YP_008521889.1 TIGRFAM: conjugative transfer region lipoprotein, TIGR03751 family; KEGG: hypothetical protein YP_008521890.1 KEGG: hypothetical protein; TIGRFAM: conjugative transfer ATPase, PFL_4706 family; PFAM: Type-IV secretion system protein TraC/Conjugative transfer ATPase YP_008521891.1 KEGG: hypothetical protein YP_008521892.1 KEGG: stbE, putative toxin-antitoxin stability system, toxin protein StbE; TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system YP_008521893.1 PFAM: Prevent-host-death protein; KEGG: stbD, putative toxin-antitoxin stability system, antitoxin protein StbD YP_008521894.1 KEGG: hypothetical protein; TIGRFAM: integrating conjugative element protein, PFL_4709 family; PFAM: protein of unknown function DUF1525 YP_008521895.1 KEGG: hypothetical protein; TIGRFAM: integrating conjugative element protein, PFL_4710 family; PFAM: TraU family protein YP_008521896.1 TIGRFAM: integrating conjugative element protein, PFL_4711 family; KEGG: hypothetical protein YP_008521897.1 KEGG: hypothetical protein YP_008521898.1 PFAM: TraG domain-containing protein; KEGG: hypothetical protein YP_008521900.1 KEGG: hypothetical protein YP_008521901.1 PFAM: CRISPR-associated protein Cas6 domain; KEGG: hypothetical protein YP_008521902.1 PFAM: protein of unknown function DUF324; KEGG: hypothetical protein YP_008521903.1 KEGG: hypothetical protein YP_008521904.1 KEGG: CRISPR-associated RAMP protein; TIGRFAM: CRISPR-associated RAMP protein, Csm3 family; PFAM: protein of unknown function DUF324 YP_008521905.1 KEGG: CRISPR-associated protein, Csm2 family; TIGRFAM: CRISPR-associated protein TM1810 domain protein; PFAM: CRISPR-associated protein TM1810 domain protein YP_008521906.1 TIGRFAM: CRISPR-associated protein, Csm1 family; KEGG: Csm1 family CRISPR-associated protein YP_008521907.1 TIGRFAM: CRISPR-associated protein Cas2; HAMAP : CRISPR associated protein Cas2; KEGG: CRISPR-associated protein Cas2; PFAM: CRISPR associated protein Cas2 YP_008521908.1 TIGRFAM: CRISPR-associated protein Cas1; HAMAP : CRISPR-associated protein Cas1; KEGG: CRISPR-associated Cas1 family protein; PFAM: CRISPR-associated protein Cas1 YP_008521909.1 KEGG: hypothetical protein YP_008521910.1 KEGG: hypothetical protein YP_008521911.1 KEGG: hypothetical protein YP_008521913.1 PFAM: Integrase catalytic domain, putative, Putative integrase, N-terminal; KEGG: integrase YP_008521915.1 PFAM: Integrase catalytic region; KEGG: transposase protein, Y4bF YP_008521916.1 KEGG: hypothetical protein YP_008521917.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: lysine exporter protein LysE/YggA YP_008521918.1 PFAM: Integrase catalytic region, HTH-like domain; KEGG: integrase YP_008521919.1 PFAM: transposase IS3/IS911 family protein; KEGG: transposase IS3/IS911 family protein YP_008521920.1 KEGG: hypothetical protein YP_008521921.1 KEGG: hypothetical protein YP_008521922.1 PFAM: domain of unknown function DUF1738; KEGG: antirestriction protein YP_008521923.1 PFAM: protein of unknown function DUF1219; KEGG: hypothetical protein YP_008521924.1 PFAM: protein of unknown function DUF1281; KEGG: hypothetical protein YP_008521925.1 KEGG: hypothetical protein YP_008521926.1 PFAM: N-6 DNA methylase; KEGG: hypothetical protein YP_008521927.1 KEGG: hypothetical protein YP_008521928.1 KEGG: conjugal transfer protein TraF YP_008521929.1 KEGG: hypothetical protein YP_008521931.1 KEGG: hypothetical protein YP_008521932.1 KEGG: hypothetical protein; TIGRFAM: integrating conjugative element relaxase, PFGI-1 class; PFAM: Relaxase, protein of unknown function DUF1528 YP_008521933.1 PFAM: integrase family protein; KEGG: phage integrase YP_008521934.1 KEGG: speC, ornithine decarboxylase, constitutive; PFAM: Orn/Lys/Arg decarboxylase major region, Orn/Lys/Arg decarboxylase domain protein YP_008521935.1 PFAM: amino acid permease-associated region; KEGG: amino acid permease-like protein YP_008521936.1 PFAM: regulatory protein TetR; KEGG: TetR family transcriptional regulator YP_008521937.1 KEGG: hypothetical protein; HAMAP : UPF0261 protein; PFAM: Uncharacterized conserved protein UCP033271 YP_008521938.1 PFAM: TIM-barrel signal transduction protein; KEGG: TIM-barrel signal transduction protein YP_008521939.1 PFAM: TIM-barrel signal transduction protein; KEGG: hypothetical protein YP_008521940.1 PFAM: Murein transglycosylase-C, N-terminal, Lytic transglycosylase catalytic; KEGG: mltC, murein transglycosylase C YP_008521941.1 KEGG: Fe(II) trafficking protein YggX; HAMAP : Fe(2+)-trafficking protein; PFAM: Fe(II) trafficking protein YggX YP_008521942.1 TIGRFAM: A/G-specific adenine glycosylase; PFAM: HhH-GPD family protein, helix-hairpin-helix motif; KEGG: adenine DNA glycosylase; SMART: HhH-GPD family protein, iron-sulfur cluster loop YP_008521943.1 TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; HAMAP : tRNA (guanine-N(7)-)-methyltransferase; KEGG: tRNA (guanine-N(7)-)-methyltransferase; PFAM: methyltransferase YP_008521944.1 PFAM: protein of unknown function DUF469; KEGG: hypothetical protein YP_008521945.1 PFAM: Protein of unknown function DUF2884; KEGG: yggN, hypothetical protein YP_008521946.1 TIGRFAM: autotransporter-associated beta strand repeat protein; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin, Autotransporter-associated beta strand repeat, Autotransporter beta- domain protein; KEGG: serine protease; SMART: Autotransporter beta- domain protein YP_008521947.1 PFAM: NADP-dependent oxidoreductase domain; KEGG: tas, aldo-keto reductase YP_008521948.1 PFAM: protein of unknown function DUF903; KEGG: hypothetical protein YP_008521949.1 PFAM: Integral membrane protein TerC; KEGG: Integral membrane protein TerC YP_008521950.1 SMART: Restriction endonuclease, type II, EcoRV-like/DNA mismatch repair MutH, core; TIGRFAM: DNA mismatch repair endonuclease mutH; KEGG: mutH, DNA mismatch repair protein; HAMAP : DNA mismatch repair protein mutH; PFAM: Restriction endonuclease, type II, EcoRV-like/DNA mismatch repair MutH, core YP_008521952.1 KEGG: dinucleoside polyphosphate hydrolase; HAMAP : RNA pyrophosphohydrolase; PFAM: NUDIX hydrolase YP_008521953.1 SMART: GAF domain protein; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; KEGG: ptsP, PTS system nitrogen assimilation enzyme I / sensory transducer; PFAM: PEP-utilizing protein, GAF domain protein, PEP-utilising protein mobile region, PEP-utilising protein domain protein YP_008521954.1 TIGRFAM: prolipoprotein diacylglyceryl transferase; HAMAP : Prolipoprotein diacylglyceryl transferase; KEGG: prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase YP_008521955.1 PFAM: thymidylate synthase; TIGRFAM: thymidylate synthase; HAMAP : Thymidylate synthase; KEGG: thymidylate synthase YP_008521956.1 KEGG: ppdA, Prepilin peptidase dependent protein A YP_008521957.1 KEGG: ppdB, Prepilin peptidase dependent protein B YP_008521958.1 PFAM: Protein of unknown function DUF2509; KEGG: hypothetical protein YP_008521959.1 PFAM: Prepilin peptidase dependent protein C; KEGG: hypothetical protein YP_008521960.1 KEGG: exodeoxyribonuclease V subunit gamma; TIGRFAM: exodeoxyribonuclease V, gamma subunit YP_008521961.1 KEGG: peptidase M16 domain-containing protein; PFAM: peptidase M16 domain protein YP_008521962.1 TIGRFAM: exodeoxyribonuclease V, beta subunit; KEGG: exonuclease V subunit beta; PFAM: Helicase superfamily 1 UvrD-related protein, UvrD-like DNA helicase YP_008521963.1 KEGG: exodeoxyribonuclease V subunit alpha; TIGRFAM: exodeoxyribonuclease V, alpha subunit YP_008521964.1 PFAM: aspartate/glutamate/uridylate kinase, GCN5-related N-acetyltransferase; TIGRFAM: amino-acid N-acetyltransferase; HAMAP : Amino-acid acetyltransferase; KEGG: N-acetylglutamate synthase YP_008521965.1 KEGG: amiC, N-acetylmuramoyl-L-alanine amidase AmiC; PFAM: cell wall hydrolase/autolysin, localization of periplasmic protein complexes; SMART: cell wall hydrolase/autolysin YP_008521966.1 KEGG: mltA, murein transglycosylase A; PFAM: MltA domain protein, 3D domain-containing protein; SMART: MltA domain protein YP_008521967.1 KEGG: D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein, D-isomer specific 2-hydroxyacid dehydrogenase catalytic region-containing protein YP_008521968.1 PFAM: GCN5-related N-acetyltransferase; KEGG: histone acetyltransferase HPA2-like acetyltransferase YP_008521969.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: UBA/THIF-type NAD/FAD binding protein YP_008521970.1 KEGG: cysteine desulfurase, sulfur acceptor subunit CsdE; TIGRFAM: cysteine desulfurase, sulfur acceptor subunit CsdE; PFAM: Fe-S metabolism associated SufE YP_008521971.1 TIGRFAM: cysteine desulfurase, catalytic subunit CsdA; KEGG: cysteine sulfinate desulfinase; PFAM: aminotransferase class V YP_008521972.1 PFAM: protein of unknown function DUF903; KEGG: hypothetical protein YP_008521973.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: gcvA, DNA-binding transcriptional dual regulator YP_008521974.1 PFAM: protein of unknown function DUF423; KEGG: hypothetical protein YP_008521975.1 KEGG: putative RNA 2'-O-ribose methyltransferase; HAMAP : Ribosomal RNA large subunit methyltransferase M; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ YP_008521976.1 HAMAP : Uncharacterized exonuclease xni; PFAM: 5'-3' exonuclease, resolvase-like domain-containing protein, 5'-3' exonuclease, subdomain-containing protein; KEGG: 5'-3' exonuclease; SMART: 5'-3' exonuclease, Helix-hairpin-helix domain protein class 2 YP_008521977.1 PFAM: Protein of unknown function DUF3412, Conserved hypothetical protein CHP00730; KEGG: ygdH, hypothetical protein YP_008521978.1 KEGG: syd, hypothetical protein; HAMAP : Protein syd; PFAM: Syd family protein YP_008521979.1 PFAM: YqcC-like domain; KEGG: hypothetical protein YP_008521980.1 PFAM: pseudouridine synthase; KEGG: pseudouridine synthase YP_008521981.1 PFAM: flavodoxin/nitric oxide synthase; KEGG: yqcA, flavoprotein YP_008521982.1 KEGG: hypothetical protein; HAMAP : UPF0325 protein yaeH; PFAM: Uncharacterized protein family UPF0325 YP_008521983.1 PFAM: transferase hexapeptide repeat containing protein; TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; HAMAP : 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; KEGG: dapD, 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase YP_008521984.1 KEGG: glnD, uridylyltransferase/uridylyl-removing enzyme; PFAM: GlnD PII-uridylyltransferase, amino acid-binding ACT domain-containing protein, DNA polymerase beta domain protein region, metal-dependent phosphohydrolase HD sub domain-containing protein; TIGRFAM: protein-P-II uridylyltransferase; HAMAP : [Protein-PII] uridylyltransferase; SMART: metal-dependent phosphohydrolase HD region YP_008521985.1 TIGRFAM: methionine aminopeptidase, type I; KEGG: methionine aminopeptidase; PFAM: peptidase M24 YP_008521986.1 TIGRFAM: ribosomal protein S2; HAMAP : ribosomal protein S2; KEGG: rpsB, 30S ribosomal protein S2; PFAM: ribosomal protein S2 YP_008521987.1 TIGRFAM: translation elongation factor Ts; HAMAP : Elongation factor Ts; KEGG: tsf, protein chain elongation factor EF-Ts; PFAM: Translation elongation factor EFTs/EF1B dimerization, ubiquitin-associated- domain-containing protein YP_008521988.1 PFAM: aspartate/glutamate/uridylate kinase; TIGRFAM: uridylate kinase; HAMAP : Uridylate kinase; KEGG: pyrH, uridylate kinase YP_008521989.1 TIGRFAM: ribosome recycling factor; HAMAP : Ribosome-recycling factor; KEGG: frr, ribosome recycling factor; PFAM: Ribosome recycling factor domain YP_008521990.1 PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain-containing protein, DXP reductoisomerase C-terminal domain; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; HAMAP : 1-deoxy-D-xylulose 5-phosphate reductoisomerase; KEGG: 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_008521991.1 PFAM: Di-trans-poly-cis-decaprenylcistransferase; TIGRFAM: undecaprenyl diphosphate synthase; HAMAP : Undecaprenyl pyrophosphate synthase; KEGG: UDP diphosphate synthase YP_008521992.1 PFAM: phosphatidate cytidylyltransferase; KEGG: Phosphatidate cytidylyltransferase YP_008521993.1 TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50, PDZ/DHR/GLGF domain protein; KEGG: membrane-associated zinc metalloprotease; SMART: PDZ/DHR/GLGF domain protein YP_008521994.1 TIGRFAM: outer membrane protein assembly complex, YaeT protein; HAMAP : Outer membrane protein assembly factor yaeT; KEGG: outer membrane protein assembly factor; PFAM: surface antigen (D15), surface antigen variable number repeat-containing protein YP_008521995.1 KEGG: hlpA, periplasmic chaperone; PFAM: outer membrane chaperone Skp (OmpH); SMART: outer membrane chaperone Skp (OmpH) YP_008521996.1 TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; HAMAP : UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; KEGG: lpxD, UDP-3-O-; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region, transferase hexapeptide repeat containing protein YP_008521997.1 TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; HAMAP : (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; KEGG: 3-hydroxyacyl-ACP dehydratase; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ YP_008521998.1 PFAM: transferase hexapeptide repeat containing protein; TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; HAMAP : Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; KEGG: UDP-N-acetylglucosamine acyltransferase YP_008521999.1 PFAM: glycosyl transferase family 19; TIGRFAM: lipid-A-disaccharide synthase; HAMAP : Lipid-A-disaccharide synthase; KEGG: Lipid-A-disaccharide synthase YP_008522000.1 HAMAP : Ribonuclease HII; KEGG: Ribonuclease H; PFAM: Ribonuclease HII/HIII domain YP_008522001.1 SMART: phosphoesterase PHP domain protein; TIGRFAM: DNA polymerase III, alpha subunit; KEGG: dnaE, DNA polymerase III subunit alpha; PFAM: DNA polymerase III alpha subunit, nucleic acid binding OB-fold tRNA/helicase-type, PHP domain protein YP_008522002.1 PFAM: acetyl-CoA carboxylase alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; HAMAP : Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; KEGG: acetyl-CoA carboxylase carboxyltransferase subunit alpha YP_008522003.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: Glyoxalase/bleomycin resistance protein/dioxygenase YP_008522004.1 SMART: tRNA(Ile)-lysidine synthetase domain protein; TIGRFAM: tRNA(Ile)-lysidine synthetase, tRNA(Ile)-lysidine synthetase domain protein; KEGG: tRNA(Ile)-lysidine synthetase; HAMAP : tRNA(Ile)-lysidine synthase; PFAM: PP-loop domain protein, tRNA(Ile)-lysidine synthetase domain protein, Protein of unkown function DUF1946 PP-loop ATpase YP_008522005.1 PFAM: Modulator of Rho-dependent transcription termination; KEGG: Rho-binding antiterminator YP_008522006.1 PFAM: protein of unknown function UPF0253; KEGG: hypothetical protein YP_008522007.1 PFAM: YaeQ family protein; KEGG: yaeQ, hypothetical protein YP_008522008.1 PFAM: copper resistance lipoprotein NlpE; KEGG: copper resistance lipoprotein NlpE YP_008522009.1 SMART: DNA mismatch repair protein MutS domain protein, MutS III domain protein; TIGRFAM: DNA mismatch repair protein MutS; KEGG: DNA mismatch repair protein MutS; HAMAP : DNA mismatch repair protein mutS; PFAM: DNA mismatch repair protein MutS domain protein, MutS II domain protein, MutS IV domain protein, MutS III domain protein YP_008522010.1 KEGG: 6,7-dihydropteridine reductase; PFAM: nitroreductase YP_008522011.1 KEGG: ANTAR domain-containing protein with unknown sensor; PFAM: Nitrate and nitrite sensing domain protein, ANTAR domain protein; SMART: ANTAR domain protein YP_008522013.1 KEGG: nitrate-binding proteint YP_008522014.1 KEGG: nitrate ABC transporter inner membrane subunit; TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: ABC-type transporter, integral membrane subunit YP_008522015.1 SMART: AAA ATPase; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; KEGG: nitrate ABC transporter ATPases C and D; PFAM: ABC transporter related protein YP_008522016.1 TIGRFAM: nitrite reductase [NAD(P)H], large subunit, nitrite reductase [NAD(P)H], small subunit; KEGG: nitrite reductase, large subunit, nucleotide-and Fe/S-cluster binding protein; PFAM: nitrite and sulfite reductase 4Fe-4S region, BFD domain protein [2Fe-2S]-binding domain protein, nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein, FAD-dependent pyridine nucleotide-disulfide oxidoreductase, Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain YP_008522017.1 PFAM: molybdopterin oxidoreductase, BFD domain protein [2Fe-2S]-binding domain protein, molybdopterin oxidoreductase Fe4S4 region, molybdopterin dinucleotide-binding region; KEGG: nitrate reductase large subunit; SMART: molybdopterin oxidoreductase Fe4S4 region YP_008522018.1 TIGRFAM: uroporphyrin-III C-methyltransferase; KEGG: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_008522019.1 PFAM: protein of unknown function DUF1456; KEGG: hypothetical protein YP_008522020.1 KEGG: tar1, methyl-accepting chemotaxis protein I; PFAM: chemotaxis sensory transducer, histidine kinase HAMP region domain protein, Cache domain protein; SMART: chemotaxis sensory transducer, histidine kinase HAMP region domain protein YP_008522021.1 PFAM: thioesterase superfamily protein; KEGG: thioesterase superfamily protein YP_008522022.1 PFAM: Rubrerythrin, protein of unknown function DUF125 transmembrane; KEGG: hypothetical protein YP_008522023.1 KEGG: alkylphosphonate utilization operon protein PhnA; TIGRFAM: alkylphosphonate utilization operon protein PhnA; PFAM: PhnA protein YP_008522024.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: LysR family transcriptional regulator YP_008522025.1 KEGG: argG2, argininosuccinate synthase; PFAM: argininosuccinate synthase YP_008522026.1 PFAM: Protein of unknown function DUF2257; KEGG: hypothetical protein YP_008522027.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: hypothetical protein YP_008522028.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sensory box/GGDEF family protein; SMART: GGDEF domain containing protein YP_008522029.1 PFAM: Domain of unknown function DUF1987-containing protein; KEGG: Fe-S Oxidoreductase YP_008522030.1 KEGG: hypothetical protein YP_008522031.1 KEGG: serine phosphatase RsbU, regulator of sigma subunit; PFAM: protein phosphatase 2C domain protein; SMART: protein phosphatase 2C domain protein YP_008522032.1 KEGG: hypothetical protein YP_008522033.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: hydrogen peroxide-inducible genes activator YP_008522034.1 KEGG: putative acetyltransferase YP_008522035.1 PFAM: General substrate transporter; KEGG: major facilitator superfamily protein YP_008522036.1 PFAM: peptidase M20, peptidase dimerization domain protein; KEGG: acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase-like deacylase YP_008522037.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: LysR family transcriptional regulator YP_008522038.1 PFAM: Methionine synthase vitamin-B12 independent; KEGG: vitamin-B12 independent methionine synthase YP_008522039.1 SMART: Asparaginase/glutaminase; TIGRFAM: L-asparaginase, type II; KEGG: L-asparaginase, type II; PFAM: Asparaginase/glutaminase YP_008522040.1 KEGG: transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_008522041.1 KEGG: sortase YP_008522042.1 KEGG: GntR family transcriptional regulator with aminotransferase domain; PFAM: aminotransferase class I and II, regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_008522043.1 PFAM: GCN5-related N-acetyltransferase; KEGG: N-acetyltransferase GCN5 YP_008522044.1 KEGG: alkylhydroperoxidase; TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase YP_008522045.1 PFAM: GCN5-related N-acetyltransferase; KEGG: N-acetyltransferase GCN5 YP_008522046.1 KEGG: phenazine biosynthesis family protein; TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein YP_008522047.1 HAMAP : Shikimate kinase, Shikimate kinase 2; KEGG: aroL, shikimate kinase; PFAM: shikimate kinase YP_008522048.1 KEGG: hypothetical protein; HAMAP : UPF0345 protein yaiE; PFAM: protein of unknown function DUF1255 YP_008522049.1 KEGG: methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer, Cache domain protein, histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer, histidine kinase HAMP region domain protein YP_008522050.1 KEGG: putative exonuclease RdgC; HAMAP : Recombination-associated protein rdgC; PFAM: exonuclease RdgC YP_008522051.1 KEGG: SMC domain-containing protein YP_008522052.1 KEGG: nuclease SbcCD subunit D; TIGRFAM: nuclease SbcCD, D subunit; PFAM: Nuclease SbcD C-terminal domain, metallophosphoesterase YP_008522053.1 TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver, transcriptional regulator domain-containing protein; KEGG: winged helix family two component transcriptional regulator; SMART: response regulator receiver, transcriptional regulator domain-containing protein YP_008522054.1 TIGRFAM: phosphate regulon sensor kinase PhoR, PAS sensor protein; PFAM: Protein of unknown function DUF3329, PAS fold domain protein, ATP-binding region ATPase domain protein, histidine kinase A domain protein; KEGG: phosphate regulon sensor protein PhoR; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein, PAS domain containing protein YP_008522055.1 PFAM: Methionine synthase vitamin-B12 independent; KEGG: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase YP_008522056.1 KEGG: brnQ, branched chain amino acid transporter (LIV-II); TIGRFAM: branched-chain amino acid transport system II carrier protein; PFAM: branched-chain amino acid transport system II carrier protein YP_008522057.1 PFAM: amino acid permease-associated region; KEGG: amino acid permease-associated region YP_008522058.1 KEGG: ahpC, putative alkyl hydroperoxide reductase subunit c; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen, Peroxiredoxin YP_008522059.1 KEGG: (Acyl-carrier-protein) phosphodiesterase; PFAM: Acyl carrier protein phosphodiesterase YP_008522060.1 TIGRFAM: S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; HAMAP : S-adenosylmethionine:tRNA ribosyltransferase-isomerase; KEGG: S-adenosylmethionine--tRNA ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein YP_008522061.1 PFAM: Queuine/other tRNA-ribosyltransferase; TIGRFAM: queuine tRNA-ribosyltransferase, tRNA-guanine transglycosylase, various specificities; HAMAP : Queuine tRNA-ribosyltransferase; KEGG: tgt, queuine tRNA-ribosyltransferase YP_008522062.1 KEGG: preprotein translocase subunit YajC; TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein YP_008522063.1 TIGRFAM: protein-export membrane protein SecD, protein-export membrane protein, SecD/SecF family; HAMAP : SecD export membrane protein; KEGG: protein-export membrane protein SecD; PFAM: Protein translocase subunit SecD/SecF, Protein translocase subunit SecD/SecF/SecDF, conserved site YP_008522064.1 TIGRFAM: protein-export membrane protein SecF, protein-export membrane protein, SecD/SecF family; HAMAP : SecF protein; KEGG: secF, preprotein translocase subunit SecF; PFAM: Protein translocase subunit SecD/SecF, Protein translocase subunit SecD/SecF/SecDF, conserved site YP_008522065.1 PFAM: Protein of unknown function DUF3251; KEGG: yajI, outer membrane lipoprotein YP_008522066.1 SMART: cation transporting ATPase domain protein; TIGRFAM: magnesium-translocating P-type ATPase, ATPase, P-type (transporting), HAD superfamily, subfamily IC; KEGG: magnesium-transporting ATPase MgtA; PFAM: E1-E2 ATPase-associated domain protein, Haloacid dehalogenase domain protein hydrolase, cation transporting ATPase domain protein YP_008522067.1 TIGRFAM: Ribonucleotide reductase regulator NrdR-like protein; HAMAP : Transcriptional repressor nrdR; KEGG: ybaD, ribonucleotide reductase transcriptional regulator NrdR; PFAM: ATP-cone domain protein YP_008522068.1 TIGRFAM: riboflavin biosynthesis protein RibD, Riboflavin-specific deaminase domain protein; KEGG: ribD, bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase; PFAM: bifunctional deaminase-reductase domain protein, CMP/dCMP deaminase zinc-binding protein YP_008522069.1 TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; HAMAP : 6,7-dimethyl-8-ribityllumazine synthase; KEGG: ribH, 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase YP_008522070.1 TIGRFAM: transcription antitermination factor NusB; HAMAP : N utilization substance protein B-like protein; KEGG: NusB antitermination factor; PFAM: NusB/RsmB/TIM44 YP_008522071.1 PFAM: AIR synthase related protein, AIR synthase related protein domain protein; TIGRFAM: thiamine-monophosphate kinase; HAMAP : thiamine-monophosphate kinase; KEGG: thiamine monophosphate kinase YP_008522072.1 KEGG: deoxyxylulose-5-phosphate synthase; PFAM: deoxyxylulose-5-phosphate synthase, Transketolase central region, Transketolase domain-containing protein; TIGRFAM: deoxyxylulose-5-phosphate synthase; HAMAP : 1-deoxy-D-xylulose-5-phosphate synthase; SMART: Transketolase central region YP_008522073.1 KEGG: geranyltranstransferase; PFAM: Polyprenyl synthetase YP_008522074.1 TIGRFAM: exodeoxyribonuclease VII, small subunit; HAMAP : Exodeoxyribonuclease 7 small subunit; KEGG: xseB, exodeoxyribonuclease VII small subunit; PFAM: Exonuclease VII small subunit YP_008522075.1 SMART: THUMP domain-containing protein; TIGRFAM: thiamine biosynthesis/tRNA modification protein ThiI, Thiazole biosynthesis domain; KEGG: thiI, sulfur transfer protein; HAMAP : tRNA sulfurtransferase; PFAM: Thiamine biosynthesis protein, THUMP domain-containing protein YP_008522076.1 KEGG: DJ-1 family protein; TIGRFAM: DJ-1 family protein; PFAM: ThiJ/PfpI domain-containing protein YP_008522077.1 TIGRFAM: 2-dehydropantoate 2-reductase; KEGG: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein YP_008522078.1 KEGG: putative nucleotide-binding protein; HAMAP : UPF0234 protein yajQ; PFAM: protein of unknown function DUF520 YP_008522079.1 PFAM: major facilitator superfamily MFS_1; KEGG: yajR, transporter YP_008522080.1 TIGRFAM: protoheme IX farnesyltransferase; HAMAP : Protoheme IX farnesyltransferase; KEGG: cyoE, protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase YP_008522081.1 KEGG: cytochrome o ubiquinol oxidase subunit IV; TIGRFAM: cytochrome o ubiquinol oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV YP_008522082.1 KEGG: cyoC, cytochrome o ubiquinol oxidase subunit III; TIGRFAM: cytochrome o ubiquinol oxidase, subunit III; PFAM: cytochrome c oxidase subunit III YP_008522083.1 TIGRFAM: cytochrome o ubiquinol oxidase, subunit I; KEGG: cyoB, cytochrome o ubiquinol oxidase subunit I; PFAM: cytochrome c oxidase subunit I YP_008522084.1 KEGG: cyoA, cytochrome o ubiquinol oxidase subunit II; TIGRFAM: ubiquinol oxidase, subunit II; PFAM: COX aromatic rich domain protein, cytochrome c oxidase subunit II YP_008522085.1 KEGG: AmpG-like permease; TIGRFAM: AmpG-related permease; PFAM: major facilitator superfamily MFS_1 YP_008522086.1 PFAM: Uncharacterized lipoprotein; KEGG: yajG, lipoprotein YP_008522087.1 PFAM: BolA family protein; KEGG: BolA family protein YP_008522088.1 TIGRFAM: trigger factor; HAMAP : Trigger factor; KEGG: trigger factor; PFAM: trigger factor domain-containing protein, peptidylprolyl isomerase FKBP-type YP_008522089.1 PFAM: ClpP/TepA; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; HAMAP : ATP-dependent Clp protease proteolytic subunit; KEGG: clpP, proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine proteases YP_008522091.1 SMART: Clp ATPase domain-containing protein, AAA ATPase; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit ClpX; KEGG: clpX, ATP-dependent protease ATP-binding subunit ClpX; HAMAP : ATP-dependent Clp protease ATP-binding subunit clpX; PFAM: ATPase AAA-2 domain protein, Clp ATPase domain-containing protein YP_008522092.1 SMART: peptidase S16 lon domain protein, AAA ATPase; TIGRFAM: ATP-dependent protease La; KEGG: DNA-binding ATP-dependent protease La; PFAM: peptidase S16 lon domain protein, AAA ATPase central domain protein YP_008522093.1 KEGG: transcriptional regulator HU subunit beta; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein YP_008522094.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: ppiD, peptidyl-prolyl cis-trans isomerase D YP_008522095.1 TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; KEGG: hypothetical protein YP_008522096.1 TIGRFAM: exsB protein; HAMAP : 7-cyano-7-deazaguanine synthase; KEGG: queC, preQ0 biosynthesis protein; PFAM: Queuosine synthesis-like protein YP_008522097.1 KEGG: Pyridoxal-5'-phosphate-dependent protein subunit beta; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_008522098.1 KEGG: AsnC family transcriptional regulator; PFAM: Transcription regulator, AsnC-type; SMART: Transcription regulator, AsnC-type YP_008522099.1 PFAM: ABC transporter transmembrane region, ABC transporter related protein; KEGG: multidrug transporter membrane\ATP-binding proteins; SMART: AAA ATPase; overlaps another CDS with the same product name YP_008522100.1 PFAM: ABC transporter transmembrane region, ABC transporter related protein; KEGG: ABC transporter; SMART: AAA ATPase; overlaps another CDS with the same product name YP_008522101.1 KEGG: nitrogen regulatory protein P-II 2; PFAM: nitrogen regulatory protein P-II; SMART: nitrogen regulatory protein P-II YP_008522102.1 KEGG: ammonium transporter; TIGRFAM: ammonium transporter; PFAM: Ammonium transporter AmtB-like YP_008522103.1 TIGRFAM: acyl-CoA thioesterase II; KEGG: acyl-CoA thioesterase II; PFAM: Acyl-CoA thioesterase II domain YP_008522104.1 KEGG: methylated-DNA/protein-cysteine methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding protein YP_008522105.1 PFAM: Hemolysin expression modulating family protein; KEGG: hemolysin expression-modulating protein YP_008522106.1 PFAM: Biofilm formation regulator protein YbaJ; KEGG: hypothetical protein YP_008522108.1 KEGG: tpn1330, transposase for IS1330 YP_008522109.1 KEGG: acrB, multidrug efflux system protein; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein YP_008522110.1 KEGG: RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_008522111.1 PFAM: Tetracycline transcriptional repressor MAATS-type domain-containing protein, regulatory protein TetR; KEGG: DNA-binding transcriptional repressor AcrR YP_008522112.1 PFAM: Mechanosensitive ion channel inner membrane domain 1, MscS Mechanosensitive ion channel; KEGG: mechanosensitive ion channel protein MscS YP_008522113.1 PFAM: Protein of unknown function DUF2496, YbaM-related protein; KEGG: ybaM, hypothetical protein YP_008522114.1 PFAM: Primosomal replication priB and priC; KEGG: priC, primosomal replication protein N'' YP_008522115.1 PFAM: protein of unknown function DUF454; KEGG: hypothetical protein YP_008522116.1 TIGRFAM: adenine phosphoribosyltransferase; HAMAP : Adenine phosphoribosyltransferase; KEGG: apt, adenine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_008522117.1 TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: DNA polymerase III, tau subunit, domain V, DNA polymerase III, gamma subunit, domain III, DNA polymerase III subunits tau domain IV DnaB-binding protein; KEGG: dnaX, DNA polymerase III subunit gamma and tau; SMART: AAA ATPase YP_008522118.1 TIGRFAM: Uncharacterized protein family UPF0133; HAMAP : UPF0133 protein ybaB; KEGG: hypothetical protein; PFAM: Uncharacterized protein family UPF0133 YP_008522119.1 SMART: TOPRIM domain-containing protein; TIGRFAM: recombination protein RecR; KEGG: recR, gap repair protein; HAMAP : Recombination protein recR; PFAM: TOPRIM domain-containing protein, Recombination protein RecR, C4-type zinc finger YP_008522120.1 HAMAP : Chaperone protein htpG; PFAM: heat shock protein Hsp90; KEGG: Heat shock protein Hsp90-like protein; SMART: ATP-binding region ATPase domain protein YP_008522121.1 TIGRFAM: adenylate kinase; HAMAP : Adenylate kinase; KEGG: adenylate kinase; PFAM: adenylate kinase, adenylate kinase lid domain-containing protein YP_008522122.1 PFAM: ferrochelatase; TIGRFAM: ferrochelatase; HAMAP : Ferrochelatase; KEGG: hemH, ferrochelatase YP_008522123.1 KEGG: ybaL, transporter with NAD(P)-binding Rossmann-fold domain; TIGRFAM: potassium efflux system protein; PFAM: sodium/hydrogen exchanger, TrkA-N domain protein YP_008522124.1 HAMAP : L-lactate dehydrogenase [cytochrome]; KEGG: lldD, L-lactate dehydrogenase; PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase YP_008522125.1 KEGG: GntR family transcriptional regulator; PFAM: GntR domain protein, regulatory protein GntR HTH; SMART: GntR domain protein, regulatory protein GntR HTH YP_008522126.1 KEGG: L-lactate permease; TIGRFAM: L-lactate transport; PFAM: L-lactate permease YP_008522128.1 KEGG: hypothetical protein; TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region YP_008522129.1 PFAM: TraB determinant protein; KEGG: GumN family protein YP_008522130.1 TIGRFAM: copper-translocating P-type ATPase, heavy metal translocating P-type ATPase, ATPase, P-type (transporting), HAD superfamily, subfamily IC; KEGG: copper-translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein, Heavy metal transport/detoxification protein, Haloacid dehalogenase domain protein hydrolase YP_008522131.1 KEGG: MerR family transcriptional regulator; TIGRFAM: Cu(I)-responsive transcriptional regulator; SMART: regulatory protein MerR YP_008522132.1 PFAM: protein of unknown function DUF107; KEGG: hypothetical protein YP_008522133.1 KEGG: hypothetical protein; PFAM: band 7 protein; SMART: band 7 protein YP_008522134.1 KEGG: nrdB, ribonucleotide-diphosphate reductase subunit beta; PFAM: ribonucleotide reductase YP_008522135.1 KEGG: NrdA aerobic NDP reductase large subunit; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; PFAM: ribonucleotide reductase large subunit, ATP-cone domain protein, Ribonucleotide reductase large subunit domain protein YP_008522136.1 TIGRFAM: ubiquinone biosynthesis O-methyltransferase; HAMAP : 3-demethylubiquinone-9 3-methyltransferase; KEGG: ubiquinone biosynthesis O-methyltransferase YP_008522137.1 KEGG: DNA gyrase subunit A; PFAM: DNA gyrase/topoisomerase IV subunit A, DNA gyrase repeat beta-propeller; TIGRFAM: DNA gyrase, A subunit; HAMAP : DNA gyrase subunit A; SMART: DNA gyrase/topoisomerase IV subunit A YP_008522138.1 KEGG: rcsC, hybrid sensory kinase in two-component regulatory system with RcsB and YojN; PFAM: response regulator receiver, Signal transduction histidine kinase RcsC, alpha-beta loop, ATP-binding region ATPase domain protein, histidine kinase A domain protein; SMART: response regulator receiver, ATP-binding region ATPase domain protein, histidine kinase A domain protein YP_008522139.1 KEGG: transcriptional regulator RcsB; PFAM: response regulator receiver, regulatory protein LuxR; SMART: regulatory protein LuxR, response regulator receiver YP_008522140.1 KEGG: yojN, 2-component sensor protein; PFAM: Hpt domain protein, ATP-binding region ATPase domain protein, histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein YP_008522141.1 PFAM: major facilitator superfamily MFS_1; KEGG: hypothetical protein YP_008522142.1 TIGRFAM: isochorismate synthase; KEGG: isochorismate synthase; PFAM: Chorismate binding domain-containing protein YP_008522143.1 PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; TIGRFAM: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase; KEGG: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylate synthase; HAMAP : 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylate synthase YP_008522144.1 KEGG: yfbB, peptidase; TIGRFAM: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase YP_008522145.1 TIGRFAM: naphthoate synthase; KEGG: naphthoate synthase; PFAM: Enoyl-CoA hydratase/isomerase YP_008522146.1 KEGG: menC, O-succinylbenzoate synthase; PFAM: Mandelate racemase/muconate lactonizing protein; TIGRFAM: o-succinylbenzoic acid (OSB) synthetase; HAMAP : o-succinylbenzoate synthase; SMART: Mandelate racemase/muconate lactonizing protein YP_008522147.1 TIGRFAM: O-succinylbenzoate-CoA ligase; KEGG: O-succinylbenzoic acid--CoA ligase; PFAM: AMP-dependent synthetase and ligase YP_008522148.1 KEGG: YfaZ family protein; TIGRFAM: outer membrane insertion C-terminal signal; PFAM: YfaZ family protein YP_008522149.1 SMART: molybdopterin binding domain-containing protein; TIGRFAM: competence/damage-inducible protein CinA, molybdenum cofactor synthesis domain protein; KEGG: competence/damage-inducible protein CinA; HAMAP : Competence-damaged protein; PFAM: molybdopterin binding domain-containing protein YP_008522150.1 PFAM: Thioredoxin domain-containing protein; KEGG: Thioredoxin domain-containing protein YP_008522151.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: short chain dehydrogenase; SMART: Polyketide synthase/Fatty acid synthase, KR YP_008522152.1 KEGG: multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1 YP_008522153.1 PFAM: ABC transporter related protein; KEGG: phosphonate-transporting ATPase; SMART: AAA ATPase YP_008522154.1 PFAM: protein of unknown function DUF214; KEGG: hypothetical protein YP_008522155.1 KEGG: TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, TonB-dependent receptor plug YP_008522156.1 PFAM: ABC-type transporter, periplasmic subunit; KEGG: periplasmic-binding protein YP_008522157.1 KEGG: polar amino acid ABC transporter permease; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: ABC-type transporter, integral membrane subunit YP_008522158.1 KEGG: family 3 extracellular solute-binding protein; PFAM: ABC-type transporter, periplasmic subunit family 3; SMART: ABC-type transporter, periplasmic subunit family 3, ionotropic glutamate receptor YP_008522159.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: inner-membrane translocator YP_008522160.1 PFAM: ABC transporter related protein; KEGG: ABC transporter-like protein; SMART: AAA ATPase YP_008522161.1 PFAM: Periplasmic binding protein domain; KEGG: periplasmic-binding protein/LacI transcriptional regulator YP_008522162.1 KEGG: galS, DNA-binding transcriptional regulator; PFAM: regulatory protein LacI; SMART: regulatory protein LacI YP_008522163.1 TIGRFAM: phosphoribosylglycinamide formyltransferase; KEGG: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein YP_008522164.1 PFAM: AIR synthase related protein domain protein, AIR synthase related protein; TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; HAMAP : phosphoribosylformylglycinamidine cyclo-ligase; KEGG: phosphoribosylformylglycinamidine cyclo-ligase YP_008522165.1 TIGRFAM: uracil phosphoribosyltransferase; HAMAP : Uracil phosphoribosyl transferase; KEGG: uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_008522166.1 KEGG: uraA, Uracil permease; TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease YP_008522167.1 TIGRFAM: DnaA regulatory inactivator Hda; HAMAP : DnaA-like protein hda; KEGG: DnaA regulatory inactivator Hda; PFAM: Chromosomal replication initiator DnaA YP_008522168.1 KEGG: arsenate reductase; TIGRFAM: arsenate reductase; PFAM: arsenate reductase like protein YP_008522169.1 PFAM: peptidase M48 Ste24p; KEGG: peptidase M48 Ste24p YP_008522170.1 KEGG: bcp, thioredoxin-dependent thiol peroxidase; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen YP_008522171.1 KEGG: gcvR, DNA-binding transcriptional repressor YP_008522172.1 PFAM: dihydrodipicolinate synthetase; TIGRFAM: dihydrodipicolinate synthase; HAMAP : Dihydrodipicolinate synthase; KEGG: dihydrodipicolinate synthase YP_008522173.1 KEGG: NlpBDapX family lipoprotein; HAMAP : Lipoprotein NlpB type; PFAM: NlpBDapX family lipoprotein YP_008522174.1 PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; HAMAP : Phosphoribosylaminoimidazole-succinocarboxamide synthase; KEGG: phosphoribosylaminoimidazole-succinocarboxamide synthase YP_008522175.1 KEGG: hypothetical protein; HAMAP : UPF0756 membrane protein yeaL; PFAM: protein of unknown function DUF441 YP_008522176.1 KEGG: hypothetical protein; HAMAP : tRNA(Met) cytidine acetyltransferase TmcA; PFAM: protein of unknown function DUF699 ATPase , domain of unknown function DUF1726 YP_008522177.1 PFAM: phospholipase/Carboxylesterase; KEGG: ypfH, hypothetical protein YP_008522178.1 TIGRFAM: acetyl-CoA acetyltransferase; KEGG: acetyl-CoA acetyltransferase; PFAM: Thiolase domain-containing protein YP_008522179.1 SMART: coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; KEGG: atoA, acetate CoA-transferase subunit beta; PFAM: coenzyme A transferase YP_008522180.1 SMART: coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; KEGG: 3-oxoacid CoA-transferase subunit A; PFAM: coenzyme A transferase YP_008522181.1 KEGG: hypothetical protein YP_008522182.1 PFAM: protein of unknown function DUF1446; KEGG: hypothetical protein YP_008522183.1 KEGG: citM, Mg(2+)/citrate complex transporter; TIGRFAM: citrate/H+ symporter, CitMHS family; PFAM: Citrate transporter YP_008522184.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: LysR family transcriptional regulator YP_008522185.1 KEGG: hypothetical protein; HAMAP : UPF0370 protein ypfN; PFAM: Uncharacterized protein family UPF0370 YP_008522186.1 PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: D,D-carboxypeptidase-related protein YP_008522187.1 TIGRFAM: succinyl-diaminopimelate desuccinylase; HAMAP : Succinyl-diaminopimelate desuccinylase; KEGG: succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20, peptidase dimerization domain protein YP_008522188.1 KEGG: arsenate reductase; TIGRFAM: ArsC family protein; PFAM: arsenate reductase like protein YP_008522189.1 KEGG: arsenical-resistance protein; TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter YP_008522190.1 PFAM: Arsenical resistance operon trans-acting repressor ArsD; KEGG: arsA, arsenite-activated ATPase ArsA YP_008522191.1 KEGG: arsC2, arsenate reductase ArsC; PFAM: Phosphotyrosine protein phosphatase I superfamily; SMART: Phosphotyrosine protein phosphatase I superfamily YP_008522192.1 SMART: regulatory protein ArsR; KEGG: arsenic resistance transcriptional regulator YP_008522193.1 KEGG: aspartate/glutamate racemase; TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase YP_008522194.1 KEGG: cspE, cold shock protein CspE; PFAM: Cold-shock protein DNA-binding protein; SMART: Cold shock protein YP_008522195.1 TIGRFAM: CrcB protein; HAMAP : CrcB-like protein; KEGG: crcB, inner membrane protein associated with chromosome condensation; PFAM: Camphor resistance CrcB protein YP_008522196.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_008522197.1 TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; HAMAP : Sec-independent protein translocase protein tatA/E-like protein, Twin-arginine translocation protein TatE; KEGG: tatE, twin arginine translocase protein A; PFAM: sec-independent translocation protein mttA/Hcf106 YP_008522198.1 KEGG: lipoyl synthase; PFAM: Radical SAM domain protein; TIGRFAM: lipoic acid synthetase; HAMAP : Lipoyl synthase; SMART: Elongator protein 3/MiaB/NifB YP_008522199.1 PFAM: biotin/lipoate A/B protein ligase; TIGRFAM: lipoate-protein ligase B; HAMAP : Octanoyltransferase; KEGG: lipoate-protein ligase B YP_008522200.1 KEGG: hypothetical protein; HAMAP : UPF0250 protein ybeD; PFAM: protein of unknown function DUF493 YP_008522201.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1, Penicillin-binding protein 5 domain protein; KEGG: D-alanyl-D-alanine carboxypeptidase; SMART: Penicillin-binding protein 5 domain protein YP_008522202.1 KEGG: rare lipoprotein A; TIGRFAM: rare lipoprotein A; PFAM: Barwin-related endoglucanase, Sporulation domain-containing protein YP_008522203.1 KEGG: cell wall shape-determining protein; TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein YP_008522204.1 TIGRFAM: penicillin-binding protein 2; KEGG: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase, Penicillin-binding protein dimerization domain-containing protein YP_008522205.1 TIGRFAM: Conserved hypothetical protein CHP00246; HAMAP : Ribosomal RNA large subunit methyltransferase H; KEGG: rRNA large subunit methyltransferase; PFAM: SPOUT methyltransferase YP_008522206.1 KEGG: hypothetical protein; TIGRFAM: iojap-like protein; PFAM: Oligomerisation domain YP_008522207.1 PFAM: cytidylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase, cytidyltransferase-related domain protein; HAMAP : nicotinate-nucleotide adenylyltransferase; KEGG: nadD, nicotinic acid mononucleotide adenylyltransferase, NAD(P)-dependent YP_008522208.1 TIGRFAM: DNA polymerase III, delta subunit; KEGG: holA, DNA polymerase III subunit delta; PFAM: DNA polymerase III delta YP_008522209.1 PFAM: Rare lipoprotein B; KEGG: Rare lipoprotein B YP_008522210.1 TIGRFAM: leucyl-tRNA synthetase; HAMAP : leucyl-tRNA synthetase class Ia; KEGG: leucyl-tRNA synthetase YP_008522211.1 PFAM: protein of unknown function DUF1451; KEGG: hypothetical protein YP_008522212.1 PFAM: ABC transporter related protein; KEGG: ABC transporter; SMART: AAA ATPase YP_008522213.1 KEGG: polar amino acid ABC transporter permease; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: ABC-type transporter, integral membrane subunit YP_008522214.1 KEGG: polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: ABC-type transporter, integral membrane subunit YP_008522215.1 KEGG: glutamate and aspartate transporter subunit; PFAM: ABC-type transporter, periplasmic subunit family 3; SMART: ABC-type transporter, periplasmic subunit family 3 YP_008522216.1 TIGRFAM: apolipoprotein N-acyltransferase; HAMAP : Apolipoprotein N-acyltransferase; KEGG: lnt, apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_008522217.1 KEGG: corC, Magnesium and cobalt efflux protein CorC; PFAM: transporter-associated region, CBS domain containing protein; SMART: transporter-associated region, CBS domain containing protein YP_008522218.1 TIGRFAM: protein of unknown function UPF0054; HAMAP : metalloprotease ybeY; KEGG: metalloprotease; PFAM: protein of unknown function UPF0054 YP_008522219.1 PFAM: PhoH family protein; KEGG: PhoH family protein YP_008522220.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: tRNA-i(6)A37 thiotransferase enzyme MiaB, RNA modification enzyme, MiaB family; KEGG: tRNA-i(6)A37 thiotransferase MiaB; HAMAP : (Dimethylallyl)adenosine tRNA methylthiotransferase miaB; PFAM: Radical SAM domain protein, deoxyribonuclease/rho motif-related TRAM, protein of unknown function UPF0004 YP_008522221.1 KEGG: ubiF, 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding protein YP_008522222.1 TIGRFAM: asparagine synthase (glutamine-hydrolyzing); KEGG: asparagine synthase; PFAM: asparagine synthase, glutamine amidotransferase class-II YP_008522223.1 KEGG: ROK family protein; PFAM: ROK family protein, regulatory protein MarR YP_008522224.1 TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; KEGG: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase YP_008522225.1 PFAM: glucosamine/galactosamine-6-phosphate isomerase; TIGRFAM: glucosamine-6-phosphate isomerase; HAMAP : Glucosamine-6-phosphate deaminase; KEGG: glucosamine-6-phosphate isomerase YP_008522226.1 TIGRFAM: PTS system, N-acetylglucosamine-specific IIBC subunit, PTS system, glucose-like IIB subunint; KEGG: nagE, PTS system N-acetylglucosamine-specific transporter subunit IIABC; PFAM: phosphotransferase system EIIC, Phosphotransferase system EIIB/cysteine, phosphorylation site YP_008522227.1 PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain-containing protein, Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain-containing protein; TIGRFAM: glutaminyl-tRNA synthetase; HAMAP : Glutaminyl-tRNA synthetase; KEGG: glutaminyl-tRNA synthetase YP_008522228.1 PFAM: ferric-uptake regulator; KEGG: Fur family ferric uptake regulator YP_008522229.1 KEGG: flavodoxin; TIGRFAM: flavodoxin; PFAM: flavodoxin/nitric oxide synthase YP_008522230.1 KEGG: serine chemoreceptor protein; PFAM: chemotaxis sensory transducer, ligand binding Tar domain protein, histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer, histidine kinase HAMP region domain protein YP_008522231.1 PFAM: CopG-like domain-containing protein DNA-binding protein; KEGG: CopG domain-containing protein DNA-binding domain-containing protein YP_008522232.1 KEGG: alpha/beta hydrolase fold protein YP_008522233.1 KEGG: SeqA family protein; HAMAP : SeqA family protein; PFAM: SeqA family protein YP_008522234.1 KEGG: phosphoglucomutase; TIGRFAM: phosphoglucomutase, alpha-D-glucose phosphate-specific; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I, phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II, phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III, phosphoglucomutase/phosphomannomutase YP_008522235.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: hypothetical protein YP_008522236.1 KEGG: winged helix family two component transcriptional regulator; PFAM: response regulator receiver, transcriptional regulator domain-containing protein; SMART: response regulator receiver, transcriptional regulator domain-containing protein YP_008522237.1 KEGG: sensor protein KdpD; PFAM: Osmosensitive K channel His kinase sensor, Domain of unknown function DUF4118, UspA domain-containing protein, histidine kinase A domain protein, ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein YP_008522238.1 PFAM: K transporting ATPase KdpC subunit; TIGRFAM: potassium-transporting ATPase, C subunit; HAMAP : Potassium-transporting ATPase C chain; KEGG: potassium ABC transporter ATPase YP_008522239.1 PFAM: Haloacid dehalogenase domain protein hydrolase, E1-E2 ATPase-associated domain protein; TIGRFAM: K+-transporting ATPase, B subunit, ATPase, P-type (transporting), HAD superfamily, subfamily IC; HAMAP : Potassium-transporting ATPase B chain; KEGG: K+-transporting ATPase subunit B YP_008522240.1 PFAM: K transporting ATPase A subunit; TIGRFAM: potassium-transporting ATPase, A subunit; HAMAP : Potassium-transporting ATPase A chain; KEGG: potassium-transporting ATPase A YP_008522241.1 PFAM: Protein of unknown function DUF2517; KEGG: hypothetical protein YP_008522242.1 PFAM: protein of unknown function DUF1722, protein of unknown function DUF523; KEGG: hypothetical protein YP_008522243.1 KEGG: Deoxyribodipyrimidine photo-lyase; PFAM: DNA photolyase FAD-binding protein, DNA photolyase domain protein YP_008522244.1 KEGG: ybgI, metal-binding hydrolase-oxidase; TIGRFAM: NGG1p interacting factor 3 protein, NIF3; PFAM: NGG1p interacting factor 3 protein, NIF3 YP_008522245.1 TIGRFAM: Conserved hypothetical protein CHP00370; PFAM: Allophanate hydrolase subunit 1; KEGG: ybgJ, hypothetical protein; SMART: Allophanate hydrolase subunit 1 YP_008522246.1 SMART: Allophanate hydrolase subunit 2; TIGRFAM: urea amidolyase related protein; KEGG: urea amidolyase-like protein; PFAM: Allophanate hydrolase subunit 2 YP_008522247.1 KEGG: LamB/YcsF family protein; HAMAP : UPF0271 protein ybgL; PFAM: LamB/YcsF family protein YP_008522248.1 KEGG: gltA, citrate synthase; TIGRFAM: citrate synthase I; PFAM: Citrate synthase YP_008522249.1 KEGG: sdhC, succinate dehydrogenase cytochrome b556 large membrane subunit; TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit YP_008522250.1 KEGG: sdhD, succinate dehydrogenase, membrane subunit, binds cytochrome b556; TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; PFAM: succinate dehydrogenase cytochrome b subunit YP_008522251.1 TIGRFAM: succinate dehydrogenase, flavoprotein subunit, succinate dehydrogenase or fumarate reductase, flavoprotein subunit; KEGG: succinate dehydrogenase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein, Fumarate reductase/succinate dehydrogenase flavoprotein-like protein YP_008522252.1 TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; KEGG: sdhB, succinate dehydrogenase, FeS subunit; PFAM: Succinate dehydogenase/fumarate reductase N-terminal YP_008522253.1 SMART: Transketolase central region; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; KEGG: 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: Transketolase central region, dehydrogenase E1 component YP_008522254.1 TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; KEGG: dihydrolipoamide succinyltransferase; PFAM: catalytic domain-containing protein, biotin/lipoyl attachment domain-containing protein, E3 binding domain-containing protein YP_008522255.1 PFAM: ATP-grasp domain protein, ATP-citrate lyase/succinyl-CoA ligase; TIGRFAM: succinyl-CoA synthetase, beta subunit; HAMAP : Succinyl-CoA ligase [ADP-forming] subunit beta; KEGG: succinyl-CoA synthetase subunit beta YP_008522256.1 SMART: CoA-binding domain protein; TIGRFAM: succinyl-CoA synthetase, alpha subunit; KEGG: succinyl-CoA synthetase subunit alpha; PFAM: CoA-binding domain protein, ATP-citrate lyase/succinyl-CoA ligase YP_008522257.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: cytochrome bd ubiquinol oxidase subunit I YP_008522258.1 KEGG: cytochrome d ubiquinol oxidase subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II YP_008522259.1 KEGG: cyd operon protein YbgT; TIGRFAM: cyd operon protein YbgT; PFAM: membrane bound YbgT family protein YP_008522260.1 KEGG: hypothetical protein; TIGRFAM: cyd operon protein YbgE; PFAM: Cyd operon protein YbgE YP_008522261.1 KEGG: acyl-CoA thioester hydrolase YbgC; TIGRFAM: tol-pal system-associated acyl-CoA thioesterase, 4-hydroxybenzoyl-CoA thioesterase; PFAM: thioesterase superfamily protein YP_008522262.1 KEGG: colicin uptake protein TolQ; TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel YP_008522263.1 KEGG: protein TolR; TIGRFAM: protein TolR; PFAM: Biopolymer transport protein ExbD/TolR YP_008522264.1 KEGG: tolA, cell envelope integrity inner membrane protein TolA; TIGRFAM: protein TolA; PFAM: Tol-Pal system TolA YP_008522265.1 TIGRFAM: Tol-Pal system beta propeller repeat protein TolB; HAMAP : Protein tolB; KEGG: tolB, translocation protein TolB; PFAM: TolB domain-containing protein, WD40-like beta Propeller containing protein YP_008522266.1 KEGG: peptidoglycan-associated lipoprotein; TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein YP_008522267.1 KEGG: hypothetical protein; TIGRFAM: tol-pal system protein YbgF; PFAM: Tetratricopeptide repeat-containing protein YP_008522268.1 KEGG: lignostilbene-alpha,beta-dioxygenase; PFAM: Carotenoid oxygenase YP_008522269.1 KEGG: betaine-aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_008522270.1 PFAM: Fusaric acid resistance protein conserved region; KEGG: fusaric acid resistance protein YP_008522271.1 PFAM: regulatory protein TetR; KEGG: TetR family transcriptional regulator YP_008522272.1 PFAM: protein of unknown function DUF554; KEGG: hypothetical protein YP_008522273.1 PFAM: Quinolinate synthetase A; TIGRFAM: quinolinate synthetase complex, A subunit; HAMAP : Quinolinate synthase A; KEGG: quinolinate synthetase YP_008522274.1 KEGG: intergral membrane NMN transport protein PnuC; TIGRFAM: nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC YP_008522275.1 KEGG: zitB, zinc efflux system; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein YP_008522276.1 TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA YP_008522277.1 KEGG: phosphoglycerate mutase 1 family; PFAM: Phosphoglycerate mutase; TIGRFAM: phosphoglycerate mutase 1 family; HAMAP : 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; SMART: Phosphoglycerate mutase YP_008522279.1 TIGRFAM: galactose mutarotase; KEGG: galM, aldose 1-epimerase; PFAM: Aldose 1-epimerase YP_008522280.1 PFAM: Galactokinase galactose-binding domain-containing protein, GHMP kinase, GHMP kinase domain protein; TIGRFAM: galactokinase; HAMAP : Galactokinase; KEGG: galactokinase YP_008522281.1 TIGRFAM: galactose-1-phosphate uridylyltransferase; KEGG: galactose-1-phosphate uridylyltransferase; PFAM: galactose-1-phosphate uridyl transferase domain protein YP_008522282.1 TIGRFAM: UDP-glucose 4-epimerase; KEGG: UDP-galactose-4-epimerase; PFAM: NAD-dependent epimerase/dehydratase, UDP-glucose 4-epimerase C-terminal domain YP_008522283.1 KEGG: modF, molybdate ABC transporter ATP-binding protein; PFAM: ABC transporter related protein; SMART: AAA ATPase YP_008522284.1 KEGG: modE, DNA-binding transcriptional dual regulator; TIGRFAM: molybdate transport repressor, ModE, molybdenum-pterin binding protein; PFAM: TOBE domain-containing protein, regulatory protein LysR YP_008522285.1 PFAM: Protein of unknown function DUF2592; KEGG: ybhT, hypothetical protein YP_008522286.1 TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; KEGG: molybdenum ABC transporter substrate-binding protein YP_008522287.1 KEGG: molybdate ABC transporter permease; TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: ABC-type transporter, integral membrane subunit YP_008522288.1 SMART: AAA ATPase; TIGRFAM: molybdate ABC transporter, ATPase subunit, molybdenum-pterin binding protein; KEGG: modC, molybdate transporter ATP-binding protein; PFAM: ABC transporter related protein, TOBE domain-containing protein YP_008522289.1 KEGG: ybhA, pyridoxal phosphatase/fructose 1,6-bisphosphatase; TIGRFAM: Cof-like hydrolase, HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3 YP_008522290.1 HAMAP : 6-phosphogluconolactonase; KEGG: 6-phosphogluconolactonase; PFAM: Lactonase, 7-bladed beta propeller YP_008522291.1 PFAM: tRNA synthetase class I (M), t-RNA-binding domain-containing protein; TIGRFAM: methionyl-tRNA synthetase, methionyl-tRNA synthetase, beta subunit; HAMAP : Methionyl-tRNA synthetase; KEGG: methionyl-tRNA synthetase YP_008522293.1 PFAM: ATPase-like, ParA/MinD, AAA domain; KEGG: mrp, antiporter inner membrane protein YP_008522294.1 PFAM: phosphoribulokinase/uridine kinase; TIGRFAM: uridine kinase; HAMAP : Uridine kinase; KEGG: uridine kinase YP_008522295.1 TIGRFAM: deoxycytidine triphosphate deaminase; HAMAP : Deoxycytidine triphosphate deaminase; KEGG: deoxycytidine triphosphate deaminase; PFAM: deoxyUTP pyrophosphatase YP_008522296.1 PFAM: AsmA family protein; KEGG: AsmA family protein YP_008522297.1 KEGG: yegH, hypothetical protein; PFAM: Integral membrane protein TerC, transporter-associated region, CBS domain containing protein; SMART: transporter-associated region YP_008522298.1 KEGG: rhamnosyl transferase WcnZ YP_008522299.1 KEGG: NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase YP_008522300.1 SMART: UDP-glucose/GDP-mannose dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; KEGG: ugd, UDP-glucose dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase , UDP-glucose/GDP-mannose dehydrogenase dimerization YP_008522301.1 KEGG: UTP--glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase YP_008522302.1 TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; KEGG: 6-phosphogluconate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase domain-containing protein, 6-phosphogluconate dehydrogenase NAD-binding protein YP_008522304.1 KEGG: CDP-diacylglycerol pyrophosphatase; PFAM: CDP-diacylglycerol pyrophosphatase YP_008522305.1 KEGG: histidine kinase; PFAM: ATP-binding region ATPase domain protein, histidine kinase HAMP region domain protein, histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein, histidine kinase HAMP region domain protein, histidine kinase A domain protein YP_008522306.1 KEGG: winged helix family two component transcriptional regulator; PFAM: response regulator receiver, transcriptional regulator domain-containing protein; SMART: response regulator receiver, transcriptional regulator domain-containing protein YP_008522307.1 PFAM: MltA-interacting MipA family protein; KEGG: MltA-interacting MipA family protein YP_008522308.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: RND family efflux transporter MFP subunit YP_008522309.1 PFAM: acriflavin resistance protein; KEGG: acriflavin resistance protein YP_008522310.1 PFAM: Insertion element protein; KEGG: hypothetical protein YP_008522311.1 KEGG: RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_008522312.1 KEGG: mexD, multidrug efflux system transmembrane protein; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein YP_008522313.1 KEGG: type I secretion outer membrane outer membrane drug efflux lipoprotein YP_008522314.1 PFAM: major facilitator superfamily MFS_1; KEGG: macrolide efflux protein YP_008522315.1 KEGG: two component transcriptional regulator; PFAM: response regulator receiver, transcriptional regulator domain-containing protein; SMART: response regulator receiver, transcriptional regulator domain-containing protein YP_008522316.1 KEGG: putative two-component system sensor kinase; PFAM: ATP-binding region ATPase domain protein, histidine kinase A domain protein, histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein, histidine kinase HAMP region domain protein YP_008522317.1 PFAM: Male sterility domain-containing protein; KEGG: polyketide synthase HetM YP_008522318.1 KEGG: putative HTH-type transcriptional regulator YdcN; PFAM: helix-turn-helix domain protein, Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein YP_008522319.1 PFAM: Thioesterase; KEGG: thioesterase YP_008522320.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: hypothetical protein YP_008522321.1 KEGG: metal-dependent hydrolases YP_008522322.1 KEGG: chlorinating enzyme; TIGRFAM: chlorinating enzyme; PFAM: Phytanoyl-CoA dioxygenase YP_008522323.1 PFAM: acyl carrier protein familyprotein; KEGG: hypothetical protein YP_008522324.1 TIGRFAM: amino acid adenylation domain protein; KEGG: hypothetical protein; PFAM: AMP-dependent synthetase and ligase YP_008522325.1 KEGG: hypothetical protein YP_008522326.1 PFAM: helix-turn-helix protein RpiR; KEGG: RpiR family transcriptional regulator YP_008522327.1 PFAM: peptidase M15D vanX D-ala-D-ala dipeptidase; KEGG: D-alanyl-D-alanine dipeptidase YP_008522328.1 PFAM: ABC-type transporter, periplasmic subunit; KEGG: family 5 extracellular solute-binding protein YP_008522329.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transport system inner membrane protein YP_008522330.1 PFAM: ABC-type transporter, integral membrane subunit, Oligopeptide transport permease C-like, N-terminal domain; KEGG: D-ala-D-ala transporter subunit YP_008522331.1 SMART: AAA ATPase; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: oligopeptide/dipeptide ABC transporter ATPase; PFAM: Oligopeptide/dipeptide ABC transporter domain protein, ABC transporter related protein YP_008522332.1 SMART: AAA ATPase; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: oligopeptide/dipeptide ABC transporter ATPase; PFAM: Oligopeptide/dipeptide ABC transporter domain protein, ABC transporter related protein YP_008522333.1 PFAM: protein of unknown function DUF1234; KEGG: hypothetical protein YP_008522334.1 KEGG: cbpA, curved DNA-binding protein; PFAM: heat shock protein DnaJ domain protein, chaperone DnaJ domain protein; SMART: heat shock protein DnaJ domain protein YP_008522335.1 KEGG: chaperone-modulator protein CbpM YP_008522336.1 TIGRFAM: 1-phosphofructokinase; KEGG: 6-phosphofructokinase; PFAM: PfkB domain protein YP_008522337.1 TIGRFAM: acetoin reductase; KEGG: acetoin reductase; PFAM: short-chain dehydrogenase/reductase SDR YP_008522339.1 PFAM: secretion protein HlyD family protein; KEGG: HlyD family secretion protein YP_008522340.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: alcohol dehydrogenase; SMART: Polyketide synthase, enoylreductase YP_008522341.1 KEGG: hypothetical protein YP_008522342.1 KEGG: EmrB/QacA family drug resistance transporter; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_008522343.1 SMART: Polyketide synthase, phosphopantetheine-binding protein; TIGRFAM: amino acid adenylation domain protein; KEGG: amino acid adenylation domain-containing protein; PFAM: AMP-dependent synthetase and ligase, condensation domain protein, Thioesterase, acyl carrier protein familyprotein YP_008522344.1 PFAM: Acyl transferase, KR domain protein, Beta-ketoacyl synthase , acyl carrier protein familyprotein; KEGG: KR domain-containing protein; SMART: Polyketide synthase, beta-ketoacyl synthase region-containing protein, Polyketide synthase/Fatty acid synthase, KR, Polyketide synthase, acyl transferase domain-containing protein YP_008522345.1 TIGRFAM: amino acid adenylation domain protein; KEGG: amino acid adenylation domain-containing protein; PFAM: AMP-dependent synthetase and ligase, acyl carrier protein familyprotein YP_008522346.1 SMART: Polyketide synthase, phosphopantetheine-binding protein; TIGRFAM: amino acid adenylation domain protein; KEGG: amino acid adenylation protein; PFAM: AMP-dependent synthetase and ligase, condensation domain protein, acyl carrier protein familyprotein YP_008522347.1 KEGG: diguanylate phosphodiesterase; PFAM: EAL domain-containing protein; SMART: EAL domain-containing protein YP_008522348.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: LysR family transcriptional regulator YP_008522349.1 PFAM: ABC-type transporter, periplasmic subunit; KEGG: family 5 extracellular solute-binding protein YP_008522350.1 KEGG: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase YP_008522351.1 KEGG: Inosine-uridine preferring nucleoside hydrolase; PFAM: Inosine/uridine-preferring nucleoside hydrolase YP_008522352.1 PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: Inosine/uridine-preferring nucleoside hydrolase YP_008522353.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transporters inner membrane component YP_008522354.1 PFAM: ABC-type transporter, integral membrane subunit, Oligopeptide transport permease C-like, N-terminal domain; KEGG: ABC transporter permease YP_008522355.1 PFAM: ABC transporter related protein, Oligopeptide/dipeptide ABC transporter domain protein; KEGG: ABC transporter; SMART: AAA ATPase YP_008522356.1 KEGG: response regulator receiver modulated CheW protein; PFAM: CheW domain protein, response regulator receiver; SMART: CheW domain protein, response regulator receiver YP_008522357.1 KEGG: DeoR family transcriptional regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_008522358.1 TIGRFAM: pyruvate formate-lyase; KEGG: hypothetical protein; PFAM: pyruvate formate-lyase PFL, formate C-acetyltransferase glycine radical YP_008522359.1 TIGRFAM: glycyl-radical enzyme activating protein family; KEGG: glycyl-radical activating family protein; PFAM: Radical SAM domain protein YP_008522360.1 TIGRFAM: transaldolase; KEGG: transaldolase; PFAM: Transaldolase YP_008522361.1 KEGG: LuxR family transcriptional regulator; PFAM: Autoinducer-binding domain protein, regulatory protein LuxR; SMART: regulatory protein LuxR YP_008522362.1 HAMAP : ATP-dependent Clp protease proteolytic subunit; KEGG: ATP-dependent Clp protease proteolytic subunit; PFAM: ClpP/TepA YP_008522363.1 KEGG: fabG, 3-oxoacyl-ACP reductase; SMART: Polyketide synthase/Fatty acid synthase, KR YP_008522364.1 KEGG: Integrase catalytic region YP_008522365.1 KEGG: transposase IS3/IS911 family protein YP_008522367.1 KEGG: NodT family RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_008522368.1 PFAM: regulatory protein TetR; KEGG: TetR family transcriptional regulator YP_008522369.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: HlyD family secretion protein YP_008522370.1 PFAM: acriflavin resistance protein; KEGG: acriflavin resistance protein YP_008522371.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: LysR family transcriptional regulator YP_008522372.1 PFAM: alanine racemase domain protein, D-serine dehydratase-like domain; KEGG: alanine racemase-like protein YP_008522373.1 PFAM: Endoribonuclease L-PSP; KEGG: putative endoribonuclease YP_008522374.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; KEGG: HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like) YP_008522375.1 TIGRFAM: outer membrane autotransporter barrel domain protein, autotransporter-associated beta strand repeat protein; PFAM: Autotransporter beta- domain protein, phosphoesterase PA-phosphatase related protein, Autotransporter-associated beta strand repeat; KEGG: autotransporter; SMART: Autotransporter beta- domain protein, phosphoesterase PA-phosphatase related protein YP_008522376.1 PFAM: regulatory protein TetR; KEGG: transcriptional regulator YP_008522377.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: RND family efflux transporter, MFP subunit YP_008522378.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: RND family efflux transporter, MFP subunit YP_008522379.1 PFAM: acriflavin resistance protein; KEGG: cation/multidrug efflux pump YP_008522380.1 KEGG: NodT family efflux transporter outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_008522381.1 KEGG: regulatory protein MarR; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_008522382.1 KEGG: alcohol dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; SMART: Polyketide synthase, enoylreductase YP_008522383.1 PFAM: Domain of unknown function DUF4102; KEGG: integrase family protein YP_008522384.1 HAMAP : Beta-galactosidase; PFAM: glycoside hydrolase family 2 TIM barrel, glycoside hydrolase family 42 domain 5 loop region, glycoside hydrolase family 2 sugar binding protein, glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; KEGG: lacZ, beta-D-galactosidase; SMART: glycoside hydrolase family 42 domain 5 loop region YP_008522385.1 KEGG: aspartate racemase; TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase YP_008522386.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: LysR family transcriptional regulator YP_008522387.1 PFAM: sodium:dicarboxylate symporter; KEGG: sodium:dicarboxylate symporter YP_008522388.1 KEGG: NifA subfamily transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein, GAF domain protein; SMART: GAF domain protein, AAA ATPase YP_008522389.1 SMART: molybdopterin oxidoreductase Fe4S4 region; TIGRFAM: formate dehydrogenase, alpha subunit; KEGG: fdhF, formate dehydrogenase H; PFAM: molybdopterin oxidoreductase, molybdopterin oxidoreductase Fe4S4 region, molybdopterin dinucleotide-binding region YP_008522390.1 PFAM: 4Fe-4S ferredoxin, iron-sulpur binding domain-containing protein, 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; KEGG: hydN, formate dehydrogenase-H YP_008522391.1 KEGG: GntR family transcriptional regulator; PFAM: GntR domain protein, regulatory protein GntR HTH; SMART: GntR domain protein, regulatory protein GntR HTH YP_008522392.1 PFAM: major facilitator superfamily MFS_1; KEGG: putative 3-hydroxyphenylpropionic transporter MhpT YP_008522393.1 PFAM: pyruvate carboxyltransferase, DmpG communication domain protein; TIGRFAM: 4-hydroxy-2-oxovalerate aldolase; HAMAP : 4-hydroxy-2-oxovalerate aldolase; KEGG: 4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase YP_008522394.1 KEGG: acetaldehyde dehydrogenase; PFAM: Acetaldehyde dehydrogenase , Semialdehyde dehydrogenase NAD - binding protein; TIGRFAM: acetaldehyde dehydrogenase (acetylating); HAMAP : Acetaldehyde dehydrogenase; SMART: Semialdehyde dehydrogenase NAD - binding protein YP_008522395.1 KEGG: 2-keto-4-pentenoate hydratase; PFAM: fumarylacetoacetate (FAA) hydrolase YP_008522396.1 KEGG: 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; HAMAP : 2-hydroxy-6-oxononadienedioate/2-hydroxy-6- oxononatrienedioate hydrolase YP_008522397.1 HAMAP : 2,3-dihydroxyphenylpropionate/2,3-dihydroxicinnamic acid 1,2-dioxygenase; KEGG: extradiol ring-cleavage dioxygenase class III protein subunit B; PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B YP_008522398.1 KEGG: mhpA, 3-(3-hydroxyphenyl)propionate hydroxylase; HAMAP : 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase; PFAM: monooxygenase FAD-binding protein YP_008522399.1 KEGG: mhpR, DNA-binding transcriptional activator MhpR; PFAM: regulatory protein IclR, Transcriptional regulator IclR; SMART: regulatory protein IclR YP_008522400.1 KEGG: class III aminotransferase; PFAM: aminotransferase class-III YP_008522401.1 PFAM: aminoglycoside phosphotransferase; KEGG: aminoglycoside phosphotransferase YP_008522402.1 KEGG: short-chain dehydrogenase/reductase SDR YP_008522403.1 KEGG: alanyl-tRNA synthetase-related protein; PFAM: Threonyl/alanyl tRNA synthetase SAD, Alanyl-tRNA synthetase, class IIc; SMART: Threonyl/alanyl tRNA synthetase SAD YP_008522404.1 PFAM: protein of unknown function DUF340 membrane; KEGG: hypothetical protein YP_008522405.1 TIGRFAM: diaminopimelate decarboxylase; KEGG: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2, N-terminal, Orn/DAP/Arg decarboxylase 2, C-terminal YP_008522406.1 KEGG: cysB2, cystathionine beta-synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_008522407.1 KEGG: hycI, hydrogenase 3 maturation protease; TIGRFAM: hydrogenase maturation protease HycI, hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein YP_008522408.1 PFAM: formate hydrogenlyase maturation HycH; KEGG: formate hydrogenlyase maturation HycH YP_008522409.1 PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: NADH ubiquinone oxidoreductase 20 kDa subunit YP_008522410.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; KEGG: hydrogenase 4 subunit H YP_008522411.1 PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit, NADH-ubiquinone oxidoreductase chain 49kDa, nickel-dependent hydrogenase large subunit; KEGG: NADH dehydrogenase (ubiquinone) 30 kDa subunit YP_008522412.1 KEGG: hydrogenase 4 subunit F; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_008522413.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: hyfE, hydrogenase 4 membrane subunit YP_008522414.1 KEGG: hydrogenase 4 subunit D; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_008522415.1 PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: respiratory-chain NADH dehydrogenase subunit 1 YP_008522416.1 KEGG: hydrogenase 4 subunit B; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_008522417.1 PFAM: 4Fe-4S ferredoxin, iron-sulpur binding domain-containing protein, 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; KEGG: 4Fe-4S ferredoxin YP_008522418.1 KEGG: [NiFe] hydrogenase metallocenter assembly protein HybG; TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC) YP_008522419.1 KEGG: DMT(drug/metabolite transporter) superfamily permease YP_008522420.1 PFAM: sodium:dicarboxylate symporter; KEGG: sodium:dicarboxylate symporter YP_008522421.1 KEGG: anaerobic C4-dicarboxylate transporter; TIGRFAM: anaerobic c4-dicarboxylate antiporter, Dcu family; PFAM: anaerobic c4-dicarboxylate membrane transporter YP_008522422.1 TIGRFAM: 1-pyrroline dehydrogenase; KEGG: gamma-aminobutyraldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_008522423.1 TIGRFAM: putrescine aminotransferase; KEGG: ygjG, ornithine aminotransferase; PFAM: aminotransferase class-III YP_008522424.1 TIGRFAM: phosphonates metabolism transcriptional regulator PhnF; PFAM: UbiC transcription regulator-associated domain-containing protein, regulatory protein GntR HTH; KEGG: phnF, transcriptional regulator PhnF; SMART: UbiC transcription regulator-associated domain-containing protein, regulatory protein GntR HTH YP_008522425.1 KEGG: phnG, PhnG protein; TIGRFAM: phosphonate C-P lyase system protein PhnG; PFAM: phosphonate metabolism PhnG YP_008522426.1 KEGG: phosphonate C-P lyase system protein PhnH; TIGRFAM: phosphonate C-P lyase system protein PhnH; PFAM: phosphonate metabolism YP_008522427.1 PFAM: phosphonate metabolism; KEGG: phosphonate metabolism YP_008522428.1 PFAM: phosphonate metabolism PhnJ; KEGG: phnJ, PhnJ protein YP_008522429.1 SMART: AAA ATPase; TIGRFAM: phosphonate C-P lyase system protein PhnK; KEGG: phnK, phosphonate C-P lyase system protein; PFAM: ABC transporter related protein, Oligopeptide/dipeptide ABC transporter domain protein YP_008522430.1 SMART: AAA ATPase; TIGRFAM: phosphonate C-P lyase system protein PhnL; KEGG: phosphonate C-P lyase system protein PhnL; PFAM: ABC transporter related protein YP_008522431.1 TIGRFAM: phosphonate metabolism protein PhnM; KEGG: phosphonate metabolism protein PhnM YP_008522432.1 SMART: guanylate kinase/L-type calcium channel region; TIGRFAM: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; KEGG: phnN, ribose 1,5-bisphosphokinase; HAMAP : phosphonate metabolism 15-bisphosphokinase (PRPP-forming) PhnN; PFAM: guanylate kinase YP_008522433.1 KEGG: phnP, metal-dependent hydrolases of the beta-lactamase superfamily I, PhnP protein; TIGRFAM: phosphonate metabolism protein PhnP; SMART: beta-lactamase domain protein YP_008522434.1 SMART: AAA ATPase; TIGRFAM: phosphonate ABC transporter, ATPase subunit; KEGG: phnC, phosphonate ABC transporter ATP-binding protein; PFAM: ABC transporter related protein YP_008522435.1 TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate binding protein, phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: phnD, phosphonate/organophosphate ester transporter subunit YP_008522436.1 KEGG: phosphonate ABC transporter permease; TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: ABC-type transporter, integral membrane subunit YP_008522437.1 KEGG: ABC transport membrane permease; TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: ABC-type transporter, integral membrane subunit YP_008522438.1 KEGG: Zn-dependent hydrolase YP_008522439.1 PFAM: DinB family protein; KEGG: DinB family protein YP_008522440.1 KEGG: rafR, Raffinose operon transcriptional regulator rafR; PFAM: periplasmic binding protein/LacI transcriptional regulator, regulatory protein LacI; SMART: regulatory protein LacI YP_008522441.1 KEGG: glycoside hydrolase clan GH-D; PFAM: glycoside hydrolase clan GH-D YP_008522442.1 KEGG: lacY, galactoside permease; TIGRFAM: oligosaccharide/H+ symporter, major facilitator superfamily (MFS); PFAM: proton/sugar symporter LacY YP_008522443.1 PFAM: peptidase C1A papain; KEGG: peptidase C1A papain YP_008522444.1 PFAM: Aldehyde Dehydrogenase; KEGG: betaine aldehyde dehydrogenase YP_008522445.1 TIGRFAM: haloacid dehalogenase, type II, HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); KEGG: haloacid dehalogenase YP_008522446.1 PFAM: FAD dependent oxidoreductase; KEGG: FAD dependent oxidoreductase YP_008522447.1 PFAM: ABC-type transporter, periplasmic subunit; KEGG: peptide ABC transporter substrate-binding protein YP_008522448.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: peptide ABC transporter permease YP_008522449.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transporter inner membrane component YP_008522450.1 PFAM: ABC transporter related protein; KEGG: peptide ABC transporter ATPase; SMART: AAA ATPase YP_008522451.1 PFAM: FAD dependent oxidoreductase; KEGG: sarcosine oxidase subunit beta YP_008522452.1 PFAM: GCN5-related N-acetyltransferase; KEGG: GCN5-related N-acetyltransferase YP_008522453.1 KEGG: ycdW, D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein YP_008522454.1 TIGRFAM: 4-aminobutyrate aminotransferase; KEGG: gabT3, 4-aminobutyrate transaminase; PFAM: aminotransferase class-III YP_008522455.1 KEGG: AsnC family transcriptional regulator; PFAM: Transcription regulator, AsnC-type; SMART: Transcription regulator, AsnC-type YP_008522456.1 KEGG: methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer, domain of unknown function DUF1745, FIST C domain-containing protein; SMART: domain of unknown function DUF1745, chemotaxis sensory transducer YP_008522457.1 KEGG: alkylhydroperoxidase; TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase YP_008522458.1 PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: hypothetical protein YP_008522459.1 KEGG: DNA-binding protein; HAMAP : UPF0251 protein; PFAM: protein of unknown function DUF134 YP_008522460.1 KEGG: ferrous iron permease; TIGRFAM: FTR1 family protein; PFAM: iron permease FTR1 YP_008522461.1 PFAM: Peptidase M75, Imelysin; KEGG: efeO, ferrous iron transporter YP_008522462.1 KEGG: efeB, tripartite ferrous iron transporter redox subunit; TIGRFAM: Tat-translocated protein, Dyp-type peroxidase family; PFAM: Dyp-type peroxidase YP_008522463.1 KEGG: hypothetical protein YP_008522464.1 PFAM: Domain of unknown function DUF1813 HSP20-like protein; KEGG: hypothetical protein YP_008522465.1 KEGG: choloylglycine hydrolase family protein; PFAM: Choloylglycine hydrolase YP_008522466.1 PFAM: amidinotransferase; TIGRFAM: arginine deiminase; HAMAP : Arginine deiminase; KEGG: arginine deiminase YP_008522467.1 TIGRFAM: carbamate kinase; KEGG: arcC, carbamate kinase; PFAM: aspartate/glutamate/uridylate kinase YP_008522468.1 PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region, aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain-containing protein; TIGRFAM: ornithine carbamoyltransferase; HAMAP : Ornithine carbamoyltransferase; KEGG: ornithine carbamoyltransferase YP_008522469.1 PFAM: C4-dicarboxylate anaerobic carrier-like protein; KEGG: C4-dicarboxylate anaerobic carrier-like protein YP_008522470.1 KEGG: arginine repressor ArgR; HAMAP : Arginine repressor; PFAM: Arginine repressor domain-containing protein, Arginine repressor, DNA-binding domain YP_008522471.1 KEGG: ornithine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase major region, Orn/Lys/Arg decarboxylase domain protein YP_008522472.1 TIGRFAM: arginine/ornithine antiporter; KEGG: potE, putrescine/proton symporter: putrescine/ornithine antiporter YP_008522473.1 PFAM: glucose-methanol-choline oxidoreductase, GMC oxidoreductase; TIGRFAM: choline dehydrogenase; HAMAP : Choline dehydrogenase; KEGG: betA, choline dehydrogenase YP_008522474.1 PFAM: Aldehyde Dehydrogenase; TIGRFAM: betaine aldehyde dehydrogenase; HAMAP : Betaine aldehyde dehydrogenase; KEGG: betaine aldehyde dehydrogenase YP_008522475.1 TIGRFAM: transcriptional repressor BetI; HAMAP : HTH-type transcriptional regulator betI; KEGG: betI, transcriptional regulator BetI; PFAM: regulatory protein TetR YP_008522476.1 KEGG: choline transport protein BetT; TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter YP_008522477.1 KEGG: proline-specific peptidase; TIGRFAM: proline-specific peptidase YP_008522478.1 KEGG: LuxR family transcriptional regulator; PFAM: Autoinducer-binding domain protein, regulatory protein LuxR; SMART: regulatory protein LuxR YP_008522479.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: dipeptide/oligopeptide/nickel ABC transporter permease YP_008522480.1 PFAM: ABC-type transporter, integral membrane subunit, Oligopeptide transport permease C-like, N-terminal domain; KEGG: binding-protein-dependent transport system inner membrane protein YP_008522481.1 SMART: AAA ATPase; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: oligopeptide/dipeptide ABC transporter ATP-binding protein; PFAM: ABC transporter related protein, Oligopeptide/dipeptide ABC transporter domain protein YP_008522482.1 SMART: AAA ATPase; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: oligopeptide/dipeptide ABC transporter ATPase; PFAM: Oligopeptide/dipeptide ABC transporter domain protein, ABC transporter related protein YP_008522483.1 PFAM: ABC-type transporter, periplasmic subunit; KEGG: family 5 extracellular solute-binding protein YP_008522484.1 KEGG: hypothetical protein YP_008522486.1 KEGG: AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC domain-containing protein, AraC protein arabinose-binding/dimerization; SMART: Helix-turn-helix, AraC domain-containing protein YP_008522487.1 TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; KEGG: sugar (glycoside-Pentoside-Hexuronide) transporter YP_008522488.1 PFAM: protein of unknown function DUF1680; KEGG: hypothetical protein YP_008522489.1 PFAM: PfkB domain protein; KEGG: PfkB domain-containing protein YP_008522490.1 KEGG: EmrB/QacA subfamily drug resistance transporter; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_008522491.1 PFAM: secretion protein HlyD family protein; KEGG: secretion protein HlyD YP_008522492.1 SMART: regulatory protein MarR; KEGG: MarR family transcriptional regulator YP_008522493.1 KEGG: iron-containing alcohol dehydrogenase; PFAM: iron-containing alcohol dehydrogenase YP_008522494.1 KEGG: transcriptional regulator of succinyl CoA synthetase operon; PFAM: UbiC transcription regulator-associated domain-containing protein, regulatory protein GntR HTH; SMART: UbiC transcription regulator-associated domain-containing protein, regulatory protein GntR HTH YP_008522495.1 PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: PTS system, cellobiose-specific iibcomponent YP_008522496.1 TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; KEGG: licC, Lichenan permease IIC component LicC; PFAM: phosphotransferase system EIIC YP_008522497.1 PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit; KEGG: PTS system, cellobiose-specific iiacomponent YP_008522498.1 KEGG: glycoside hydrolase family protein; PFAM: glycoside hydrolase family 4, Glycosyl hydrolase, family 4, C-terminal YP_008522499.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: LysR family transcriptional regulator YP_008522500.1 PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: alcohol dehydrogenase GroES domain-containing protein; SMART: Polyketide synthase, enoylreductase YP_008522502.1 KEGG: peroxiredoxin; PFAM: glutathione peroxidase YP_008522503.1 PFAM: Domain of unknown function DUF4102; KEGG: Integrase YP_008522504.1 PFAM: regulatory protein LysR; KEGG: LysR family transcriptional regulator YP_008522505.1 PFAM: amino acid permease-associated region; KEGG: amino acid permease YP_008522506.1 KEGG: response regulator; PFAM: response regulator receiver, regulatory protein LuxR; SMART: response regulator receiver, regulatory protein LuxR YP_008522507.1 SMART: Excinuclease ABC C subunit domain protein, Helix-hairpin-helix DNA-binding class 1; TIGRFAM: excinuclease ABC, C subunit; KEGG: excinuclease ABC subunit C; HAMAP : UvrABC system protein C; PFAM: excinuclease ABC C subunit domain protein, Excinuclease ABC C subunit domain protein, UvrB/UvrC protein YP_008522508.1 PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; HAMAP : CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; KEGG: phosphatidylglycerophosphate synthetase YP_008522509.1 PFAM: Integrase catalytic region; KEGG: transposase YP_008522510.1 PFAM: transposase IS3/IS911 family protein; KEGG: transposase IS3/IS911 family protein YP_008522511.1 PFAM: transposase IS3/IS911 family protein; KEGG: ISAfe5, transposase OrfA YP_008522512.1 PFAM: D5 protein; KEGG: DNA primase YP_008522514.1 KEGG: putative prophage protein YP_008522515.1 PFAM: SEC-C motif domain protein; KEGG: hypothetical protein YP_008522516.1 PFAM: transposase IS3/IS911 family protein; KEGG: transposase YP_008522517.1 KEGG: transposase YP_008522518.1 PFAM: transposase IS3/IS911 family protein; KEGG: transposase IS3/IS911 family protein YP_008522519.1 KEGG: putative prophage protein YP_008522520.1 SMART: AAA ATPase; KEGG: putative prophage ATP/GTP binding protein YP_008522521.1 PFAM: Integrase catalytic region; KEGG: transposase; overlaps another CDS with the same product name YP_008522522.1 PFAM: Integrase catalytic region; KEGG: Integrase core domain protein; overlaps another CDS with the same product name YP_008522523.1 PFAM: transposase IS3/IS911 family protein; KEGG: transposase IS3/IS911 family protein YP_008522524.1 KEGG: molybdate-binding domain of ModE; TIGRFAM: molybdenum-pterin binding protein; PFAM: TOBE domain-containing protein YP_008522525.1 SMART: DEAD-like helicase , helicase domain-containing protein; TIGRFAM: excinuclease ABC, B subunit; KEGG: uvrB, excinulease of nucleotide excision repair, DNA damage recognition component; HAMAP : UvrABC system protein B; PFAM: UvrB, YAD/RRR-motif-containing domain, type III restriction protein res subunit, UvrB/UvrC protein, helicase domain-containing protein YP_008522526.1 KEGG: hypothetical protein; TIGRFAM: Uncharacterized protein family UPF0052; PFAM: protein of unknown function UPF0052 and CofD YP_008522527.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: molybdenum cofactor biosynthesis protein A; KEGG: moaA, molybdopterin biosynthesis protein A; HAMAP : molybdenum cofactor biosynthesis protein A; PFAM: molybdenum cofactor synthesis domain protein, Radical SAM domain protein YP_008522528.1 TIGRFAM: molybdenum cofactor biosynthesis protein B, molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain-containing protein; KEGG: moaB, molybdenum cofactor biosynthesis protein B; SMART: molybdopterin binding domain-containing protein YP_008522529.1 KEGG: molybdenum cofactor biosynthesis protein C; TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis protein MoaC YP_008522530.1 KEGG: moaD, molybdopterin synthase small subunit; TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamine S protein YP_008522531.1 PFAM: molybdopterin biosynthesis MoaE protein; KEGG: moaE, molybdopterin guanine dinucleotide biosynthesis protein MoaE YP_008522532.1 PFAM: protein of unknown function UPF0005; KEGG: hypothetical protein YP_008522533.1 KEGG: ybhO, cardiolipin synthetase; PFAM: Phospholipase D-like domain; SMART: phospholipase D/Transphosphatidylase YP_008522534.1 KEGG: hypothetical protein YP_008522535.1 KEGG: ABC transporter YP_008522536.1 PFAM: ABC transporter related protein; KEGG: ABC transporter; SMART: AAA ATPase YP_008522537.1 PFAM: secretion protein HlyD family protein; KEGG: ybhG, hypothetical protein YP_008522538.1 KEGG: DEAD/DEAH box helicase domain-containing protein; PFAM: DEAD/DEAH box helicase domain protein, helicase domain-containing protein; SMART: DEAD-like helicase , helicase domain-containing protein YP_008522539.1 PFAM: Protein of unknown function DUF2127; KEGG: hypothetical protein YP_008522540.1 PFAM: dihydrouridine synthase DuS; KEGG: tRNA-dihydrouridine synthase C YP_008522541.1 KEGG: adenylyl cyclase CyaB; TIGRFAM: adenylyl cyclase CyaB; PFAM: adenylate cyclase YP_008522543.1 PFAM: protein of unknown function DUF208; KEGG: hypothetical protein YP_008522544.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: pbpG, D-alanyl-D-alanine carboxypeptidase YP_008522545.1 KEGG: glutathione S-transferase YP_008522546.1 KEGG: transcriptional repressor of the fructose operon, DeoR family; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_008522547.1 KEGG: class III aminotransferase; PFAM: aminotransferase class-III YP_008522548.1 KEGG: glycoside hydrolase family 3 domain-containing protein; PFAM: glycoside hydrolase family 3 domain protein, Fibronectin type III-like domain YP_008522549.1 KEGG: hypothetical protein YP_008522550.1 KEGG: dinG, ATP-dependent DNA helicase DinG; PFAM: helicase c2, DEAD 2 domain-containing protein; SMART: helicase c2, DEAD-like helicase YP_008522551.1 PFAM: sulfate transporter, Sulfate transporter/antisigma-factor antagonist STAS; KEGG: sulfate transporter YP_008522552.1 PFAM: Glycosyl transferase, family 3, glycosyl transferase family 3; KEGG: glycosyl transferase, family 3-like protein YP_008522553.1 PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: M3 family peptidase YP_008522554.1 PFAM: ABC transporter related protein; KEGG: glnQ, glutamine ABC transporter ATP-binding protein; SMART: AAA ATPase YP_008522555.1 KEGG: polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: ABC-type transporter, integral membrane subunit YP_008522556.1 KEGG: glutamine ABC transporter substrate-binding protein; PFAM: ABC-type transporter, periplasmic subunit family 3; SMART: ABC-type transporter, periplasmic subunit family 3, ionotropic glutamate receptor YP_008522557.1 PFAM: Ferritin Dps family protein; KEGG: dps, Fe-binding and storage protein YP_008522558.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: threonine and homoserine efflux system YP_008522559.1 KEGG: ompX, outer membrane protein X YP_008522560.1 KEGG: MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_008522561.1 PFAM: major facilitator superfamily MFS_1; KEGG: transporter YP_008522562.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: LysR family transcriptional regulator YP_008522563.1 PFAM: LamB/YcsF family protein; KEGG: hypothetical protein YP_008522564.1 PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: biotin/lipoyl attachment domain-containing protein YP_008522565.1 PFAM: Carbamoyl-phosphate synthase L chain ATP-binding protein, biotin carboxylase domain protein, Carbamoyl-phosphate synthetase large chain domain protein; KEGG: acetyl-CoA carboxylase biotin carboxylase subunit; SMART: biotin carboxylase domain protein YP_008522566.1 KEGG: allophanate hydrolase subunit 1; PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1 YP_008522567.1 SMART: Allophanate hydrolase subunit 2; TIGRFAM: urea amidolyase related protein; KEGG: urea amidolyase-like protein; PFAM: Allophanate hydrolase subunit 2 YP_008522568.1 KEGG: cytosine/purines uracil thiamine allantoin permease YP_008522569.1 PFAM: heat shock protein Hsp20; KEGG: heat shock protein Hsp20 YP_008522570.1 PFAM: Pectinesterase; KEGG: putative pectinesterase YP_008522571.1 PFAM: GlpM family protein; KEGG: GlpM family protein YP_008522572.1 KEGG: AraC family transcriptional regulator; PFAM: DJ-1 domain, InhA-type, Helix-turn-helix, AraC domain-containing protein; SMART: Helix-turn-helix, AraC domain-containing protein YP_008522573.1 PFAM: DJ-1 domain, InhA-type; KEGG: ThiJ/PfpI domain-containing protein YP_008522574.1 KEGG: amino acid permease-associated protein YP_008522576.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: hypothetical protein YP_008522577.1 KEGG: hypothetical protein YP_008522578.1 PFAM: Protein of unknown function DUF2058; KEGG: hypothetical protein YP_008522579.1 PFAM: Cold-shock protein DNA-binding protein; KEGG: hypothetical protein YP_008522580.1 PFAM: regulatory protein TetR; KEGG: TetR family transcriptional regulator YP_008522581.1 KEGG: NADH:flavin oxidoreductase; PFAM: NADH:flavin oxidoreductase/NADH oxidase YP_008522582.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: short-chain dehydrogenase/reductase SDR YP_008522583.1 KEGG: short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR YP_008522584.1 KEGG: Zn-dependent oxidoreductase; PFAM: Alcohol dehydrogenase zinc-binding domain protein, Alcohol dehydrogenase GroES domain protein; SMART: Polyketide synthase, enoylreductase YP_008522585.1 KEGG: Zn-dependent oxidoreductase YP_008522586.1 KEGG: hypothetical protein YP_008522587.1 KEGG: hypothetical protein YP_008522588.1 KEGG: hypothetical protein YP_008522589.1 KEGG: hypothetical protein YP_008522590.1 PFAM: protein of unknown function DUF927; KEGG: hypothetical protein YP_008522591.1 PFAM: Domain of unknown function DUF4102; KEGG: intA, phage integrase YP_008522592.1 PFAM: Membrane sulfatase, HI0842-related, N-terminal domain, sulfatase; KEGG: yejM, hydrolase, inner membrane YP_008522593.1 KEGG: hypothetical protein; HAMAP : UPF0352 protein yejL; PFAM: protein of unknown function DUF1414 YP_008522594.1 KEGG: 37kDa nucleoid-associated protein; HAMAP : Nucleoid-associated protein ndpA; PFAM: 37kDa nucleoid-associated protein YP_008522595.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: glutathione-dependent formaldehyde-activating protein YP_008522596.1 KEGG: 50S ribosomal protein L25; HAMAP : 50S ribosomal protein L25; PFAM: Ribosomal protein L25 YP_008522597.1 KEGG: hypothetical protein; PFAM: type III restriction protein res subunit, helicase domain-containing protein; SMART: DEAD-like helicase , helicase domain-containing protein YP_008522598.1 KEGG: hypothetical protein; TIGRFAM: putative metal-binding protein; PFAM: Protein of unknown function DUF2492 YP_008522599.1 TIGRFAM: pseudouridine synthase Rsu; PFAM: pseudouridine synthase, RNA-binding S4 domain protein; KEGG: pseudouridine synthase; SMART: RNA-binding S4 domain protein YP_008522600.1 KEGG: bcr, bicyclomycin/multidrug efflux system protein; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1 YP_008522601.1 PFAM: Uncharacterized protein family YejG; KEGG: hypothetical protein YP_008522602.1 PFAM: ABC transporter related protein, Oligopeptide/dipeptide ABC transporter domain protein; KEGG: ABC transporter ATP-binding protein; SMART: AAA ATPase YP_008522603.1 PFAM: ABC-type transporter, integral membrane subunit, Oligopeptide transport permease C-like, N-terminal domain; KEGG: binding-protein-dependent transport systems inner membrane component YP_008522604.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transport systems inner membrane component YP_008522605.1 PFAM: ABC-type transporter, periplasmic subunit; KEGG: family 5 extracellular solute-binding protein YP_008522606.1 PFAM: NLP/P60 protein; KEGG: spr, outer membrane lipoprotein YP_008522607.1 KEGG: membrane-bound phosphatase; PFAM: phosphoesterase PA-phosphatase related protein; SMART: phosphoesterase PA-phosphatase related protein YP_008522608.1 KEGG: RND family efflux transporter MFP subunit YP_008522609.1 PFAM: ABC transporter related protein; KEGG: ABC transporter ATP-binding protein; SMART: AAA ATPase YP_008522610.1 KEGG: permease; TIGRFAM: permease; PFAM: MacB-like periplasmic core domain, protein of unknown function DUF214 YP_008522611.1 KEGG: two component Fis family sigma54-specific transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein, helix-turn-helix Fis-type, response regulator receiver; SMART: response regulator receiver, AAA ATPase YP_008522612.1 KEGG: histidine kinase; PFAM: ATP-binding region ATPase domain protein, histidine kinase A domain protein, PAS fold domain protein; SMART: ATP-binding region ATPase domain protein YP_008522613.1 KEGG: hypothetical protein YP_008522614.1 PFAM: multi antimicrobial extrusion protein MatE; KEGG: vfmC, na+-driven multidrug efflux pump transmembrane protein YP_008522615.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: hypothetical protein YP_008522616.1 PFAM: acyl carrier protein familyprotein; KEGG: hypothetical protein YP_008522617.1 KEGG: 3-oxoacyl-ACP synthase YP_008522618.1 KEGG: hypothetical protein YP_008522619.1 KEGG: Orn/DAP/Arg decarboxylase 2; PFAM: Orn/DAP/Arg decarboxylase 2, N-terminal, Orn/DAP/Arg decarboxylase 2, C-terminal YP_008522620.1 KEGG: hypothetical protein YP_008522621.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain-containing protein; KEGG: 3-oxoacyl-ACP synthase YP_008522622.1 KEGG: AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase YP_008522623.1 PFAM: acyl carrier protein familyprotein; KEGG: hypothetical protein YP_008522624.1 KEGG: AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase; overlaps another CDS with the same product name YP_008522625.1 KEGG: AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase; overlaps another CDS with the same product name YP_008522626.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: acyl-CoA dehydrogenase YP_008522628.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain-containing protein; KEGG: 3-oxoacyl-ACP synthase III YP_008522629.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: acyl-CoA dehydrogenase domain-containing protein YP_008522630.1 KEGG: hypothetical protein YP_008522631.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: 3-oxoacyl-ACP synthase YP_008522632.1 KEGG: cytochrome P450; PFAM: cytochrome P450 YP_008522633.1 PFAM: Protein of unknown function DUF2807; KEGG: hypothetical protein YP_008522634.1 PFAM: cobalamin synthesis protein P47K, cobalamin synthesis CobW domain protein; KEGG: cobalamin synthesis protein P47K YP_008522635.1 SMART: Elongation factor P; TIGRFAM: elongation factor P-like protein YeiP; KEGG: elongation factor P-like protein YeiP; HAMAP : Elongation factor P-like protein; PFAM: Elongation factor P , Elongation factor P/YeiP protein, Elongation factor KOW-like domain-containing protein YP_008522636.1 PFAM: protein of unknown function UPF0153; KEGG: hypothetical protein YP_008522637.1 KEGG: sugar efflux transporter; TIGRFAM: sugar efflux transporter; PFAM: major facilitator superfamily MFS_1 YP_008522638.1 KEGG: phosphocarrier, HPr family; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2, phosphoryl transfer system HPr YP_008522639.1 TIGRFAM: 1-phosphofructokinase; KEGG: 1-phosphofructokinase; PFAM: PfkB domain protein YP_008522640.1 TIGRFAM: PTS system, fructose subfamily, IIC subunit, PTS system, fructose-specific, IIB subunnit; KEGG: PTS system fructose subfamily transporter subunit IIC; PFAM: phosphotransferase system EIIC, phosphotransferase system lactose/cellobiose-specific IIB subunit YP_008522641.1 KEGG: nfo, endonuclease IV; PFAM: Xylose isomerase domain-containing protein TIM barrel; TIGRFAM: apurinic endonuclease Apn1; HAMAP : endonuclease 4; SMART: AP endonuclease family 2 YP_008522642.1 KEGG: yeiH, hypothetical protein; TIGRFAM: Uncharacterized protein family UPF0324; PFAM: Uncharacterized protein family UPF0324 YP_008522643.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: putative DNA-binding transcriptional regulator YP_008522644.1 PFAM: amino acid permease-associated region; KEGG: lysine transporter YP_008522645.1 KEGG: sugar efflux transporter; HAMAP : sugar efflux transporter; PFAM: major facilitator superfamily MFS_1 YP_008522646.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: 3-oxoacyl-ACP synthase YP_008522647.1 KEGG: FkbH-like protein; TIGRFAM: FkbH like protein, HAD-superfamily phosphatase, subfamily IIIC; PFAM: NLI interacting domain protein YP_008522648.1 PFAM: acyl carrier protein familyprotein; KEGG: hypothetical protein YP_008522649.1 PFAM: catalytic domain-containing protein; KEGG: hypothetical protein YP_008522650.1 KEGG: hypothetical protein YP_008522651.1 PFAM: KTSC domain; KEGG: hypothetical protein YP_008522652.1 TIGRFAM: S-formylglutathione hydrolase; KEGG: S-formylglutathione hydrolase; PFAM: esterase YP_008522653.1 TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: Alcohol dehydrogenase GroES domain protein, Alcohol dehydrogenase zinc-binding domain protein; KEGG: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; SMART: Polyketide synthase, enoylreductase YP_008522654.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: LysR family transcriptional regulator YP_008522655.1 KEGG: methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer, ligand binding Tar domain protein; SMART: chemotaxis sensory transducer, histidine kinase HAMP region domain protein YP_008522656.1 PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; TIGRFAM: GTP cyclohydrolase I; HAMAP : GTP cyclohydrolase 1; KEGG: GTP cyclohydrolase I YP_008522657.1 PFAM: protein of unknown function DUF418; KEGG: hypothetical protein YP_008522658.1 PFAM: protein of unknown function DUF218; KEGG: sanA, hypothetical protein YP_008522659.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: MiaB-like tRNA modifying enzyme YliG, RNA modification enzyme, MiaB family; KEGG: rimO, ribosomal protein S12 methylthiotransferase; HAMAP : Ribosomal protein S12 methylthiotransferase rimO; PFAM: Radical SAM domain protein, protein of unknown function UPF0004 , deoxyribonuclease/rho motif-related TRAM YP_008522660.1 KEGG: glutathione S-transferase YP_008522661.1 KEGG: alpha/beta hydrolase fold protein YP_008522662.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1, Penicillin-binding protein 5 domain protein; KEGG: beta-lactamase; SMART: Penicillin-binding protein 5 domain protein YP_008522663.1 KEGG: DNA-binding transcriptional repressor DeoR; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_008522664.1 TIGRFAM: YidE/YbjL duplication; HAMAP : transport protein ybjL; KEGG: hypothetical protein; PFAM: YidE/YbjL duplication domain-containing protein, TrkA-C domain protein YP_008522665.1 PFAM: Uncharacterized protein family YbjM; KEGG: hypothetical protein YP_008522666.1 KEGG: grxA, glutaredoxin; TIGRFAM: glutaredoxin, GrxA family; PFAM: glutaredoxin YP_008522667.1 PFAM: nitroreductase; KEGG: nitroreductase YP_008522668.1 TIGRFAM: alpha-L-glutamate ligase, RimK family; HAMAP : Ribosomal protein S6 modification protein; KEGG: alpha-L-glutamate ligase; PFAM: RimK domain protein ATP-grasp YP_008522669.1 PFAM: Sensory transduction regulator; KEGG: hypothetical protein YP_008522670.1 KEGG: putrescine ABC transporter subunit periplasmic-binding protein YP_008522671.1 SMART: AAA ATPase; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; KEGG: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related protein, Transport-associated OB domain-containing protein YP_008522672.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transporter inner membrane component YP_008522673.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: putrescine ABC transporter membrane protein YP_008522674.1 PFAM: Protein of unknown function DUF2593; KEGG: hypothetical protein YP_008522675.1 TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumB; HAMAP : 23S rRNA (uracil-5-)-methyltransferase rumB; KEGG: 23S rRNA (uracil-5-)-methyltransferase RumB; PFAM: (Uracil-5)-methyltransferase YP_008522676.1 TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: ABC-type transporter, periplasmic subunit family 3; KEGG: arginine-binding periplasmic protein 2; SMART: ABC-type transporter, periplasmic subunit family 3, ionotropic glutamate receptor YP_008522677.1 KEGG: artM, arginine ABC transporter permease ArtM; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: ABC-type transporter, integral membrane subunit YP_008522678.1 KEGG: arginine transporter permease ArtQ; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: ABC-type transporter, integral membrane subunit YP_008522679.1 TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: ABC-type transporter, periplasmic subunit family 3; KEGG: artI, arginine ABC transporter substrate-binding protein; SMART: ABC-type transporter, periplasmic subunit family 3, ionotropic glutamate receptor YP_008522680.1 PFAM: ABC transporter related protein; KEGG: ABC transporter-like protein; SMART: AAA ATPase YP_008522681.1 KEGG: hypothetical protein; HAMAP : UPF0145 protein ybjQ; PFAM: protein of unknown function DUF74 YP_008522682.1 KEGG: N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2 YP_008522683.1 PFAM: Protein of unknown function DUF2867; KEGG: NAD-dependent epimerase/dehydratase YP_008522684.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein, Oxidoreductase FAD-binding domain protein, ferredoxin; KEGG: ferredoxin YP_008522685.1 TIGRFAM: hybrid cluster protein; HAMAP : Hydroxylamine reductase; KEGG: hybrid cluster protein; PFAM: Prismane YP_008522686.1 PFAM: protein of unknown function DUF340 membrane; KEGG: hypothetical protein YP_008522687.1 PFAM: Protein of unknown function DUF2813; KEGG: ybjD, hypothetical protein YP_008522688.1 TIGRFAM: cold shock domain protein CspD; PFAM: Cold-shock protein DNA-binding protein; KEGG: cold-shock DNA-binding domain-containing protein; SMART: Cold shock protein YP_008522689.1 KEGG: ATP-dependent Clp protease adaptor protein ClpS; HAMAP : ATP-dependent Clp protease adapter protein clpS; PFAM: ATP-dependent Clp protease adaptor protein ClpS YP_008522690.1 KEGG: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: Clp domain protein, AAA ATPase central domain protein; SMART: AAA ATPase YP_008522691.1 KEGG: clpA, ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine protease, chaperone activity; PFAM: ATPase AAA-2 domain protein, Clp ATPase domain-containing protein; SMART: Clp ATPase domain-containing protein, AAA ATPase YP_008522692.1 KEGG: treA, periplasmic trehalase; PFAM: glycoside hydrolase family 37 YP_008522693.1 SMART: RNA-binding domain, S1; TIGRFAM: translation initiation factor IF-1; KEGG: bacterial translation initiation factor 1 (bIF-1); HAMAP : Translation initiation factor IF-1; PFAM: S1 IF1 family protein YP_008522694.1 PFAM: leucyl/phenylalanyl-tRNA--protein transferase; TIGRFAM: leucyl/phenylalanyl-tRNA/protein transferase; HAMAP : Leucyl/phenylalanyl-tRNA--protein transferase; KEGG: aat, leucyl/phenylalanyl-tRNA-protein transferase YP_008522695.1 SMART: AAA ATPase; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; KEGG: cysteine/glutathione ABC transporter membrane/ATP-binding component; PFAM: ABC transporter related protein, ABC transporter transmembrane region YP_008522696.1 SMART: AAA ATPase; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; KEGG: cydD, cysteine ABC transporter subunit; PFAM: ABC transporter transmembrane region, ABC transporter related protein YP_008522697.1 TIGRFAM: thioredoxin reductase; KEGG: trxB, thioredoxin reductase, FAD/NAD(P)-binding protein; PFAM: Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain, FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_008522698.1 KEGG: lrp, leucine-responsive transcriptional regulator; PFAM: Transcription regulator, AsnC-type; SMART: Transcription regulator, AsnC-type YP_008522699.1 KEGG: cell division protein FtsK/SpoIIIE; PFAM: cell division FtsK/SpoIIIE, DNA translocase ftsK gamma, Domain of unknown function DUF4117; SMART: DNA translocase ftsK gamma YP_008522700.1 TIGRFAM: outer membrane lipoprotein carrier protein LolA; HAMAP : Outer-membrane lipoprotein carrier protein; KEGG: outer-membrane lipoprotein carrier protein; PFAM: outer membrane lipoprotein carrier protein LolA YP_008522701.1 KEGG: ycaJ, recombination protein; PFAM: MgsA AAA+ ATPase domain-containing protein, AAA ATPase central domain protein; SMART: AAA ATPase YP_008522702.1 TIGRFAM: seryl-tRNA synthetase; HAMAP : Seryl-tRNA synthetase; KEGG: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S), Seryl-tRNA synthetase, class IIa YP_008522703.1 SMART: molybdopterin oxidoreductase Fe4S4 region; TIGRFAM: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family; KEGG: anaerobic dimethyl sulfoxide reductase subunit A; PFAM: molybdopterin oxidoreductase, molybdopterin dinucleotide-binding region, molybdopterin oxidoreductase Fe4S4 region YP_008522704.1 SMART: molybdopterin oxidoreductase Fe4S4 region; TIGRFAM: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family; KEGG: anaerobic dimethyl sulfoxide reductase subunit A; PFAM: molybdopterin oxidoreductase, molybdopterin dinucleotide-binding region, molybdopterin oxidoreductase Fe4S4 region YP_008522705.1 KEGG: dimethylsulfoxide reductase subunit B; TIGRFAM: dimethylsulfoxide reductase, chain B; PFAM: 4Fe-4S ferredoxin, iron-sulpur binding domain-containing protein, 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_008522706.1 PFAM: DMSO reductase anchor subunit (DmsC); KEGG: DMSO reductase anchor subunit DmsC YP_008522707.1 PFAM: TorD-like chaperone; KEGG: cytoplasmic chaperone TorD family protein YP_008522708.1 KEGG: hypothetical protein YP_008522709.1 PFAM: major facilitator superfamily MFS_1; KEGG: MFS family transporter protein YP_008522710.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: LysR family transcriptional regulator YP_008522711.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: permease for cytosine/purines uracil thiamine allantoin YP_008522712.1 TIGRFAM: pyruvate formate-lyase activating enzyme; KEGG: pyruvate formate-lyase activating enzyme; PFAM: Radical SAM domain protein YP_008522713.1 TIGRFAM: formate acetyltransferase; KEGG: formate acetyltransferase; PFAM: pyruvate formate-lyase PFL, formate C-acetyltransferase glycine radical YP_008522714.1 KEGG: formate transporter; TIGRFAM: Formate transporter FocA, putative, formate/nitrite transporter; PFAM: formate/nitrite transporter YP_008522715.1 KEGG: ycaO, hypothetical protein; TIGRFAM: YcaO-domain protein; PFAM: YcaO-domain protein YP_008522716.1 PFAM: aminotransferase class V; TIGRFAM: phosphoserine aminotransferase; HAMAP : Phosphoserine aminotransferase; KEGG: serC, 3-phosphoserine/phosphohydroxythreonine aminotransferase YP_008522717.1 PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; HAMAP : 3-phosphoshikimate 1-carboxyvinyltransferase; KEGG: 3-phosphoshikimate 1-carboxyvinyltransferase YP_008522718.1 PFAM: cytidylate kinase region; TIGRFAM: cytidylate kinase; HAMAP : Cytidylate kinase; KEGG: cytidylate kinase YP_008522719.1 TIGRFAM: ribosomal protein S1; PFAM: RNA binding S1 domain protein; KEGG: rpsA, 30S ribosomal protein S1; SMART: RNA-binding domain, S1 YP_008522720.1 SMART: histone family protein DNA-binding protein; TIGRFAM: integration host factor, beta subunit; KEGG: ihfB, integration host factor subunit beta; HAMAP : Integration host factor subunit beta; PFAM: histone family protein DNA-binding protein YP_008522721.1 TIGRFAM: phosphoribosyl-ATP diphosphatase; HAMAP : Phosphoribosyl-ATP pyrophosphatase, Histidine biosynthesis bifunctional protein hisIE; KEGG: hisI, bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase; PFAM: phosphoribosyl-AMP cyclohydrolase, Phosphoribosyl-ATP pyrophosphohydrolase-like protein YP_008522722.1 TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; HAMAP : Imidazole glycerol phosphate synthase subunit hisF; KEGG: hisF, imidazole glycerol phosphate synthase subunit HisF; PFAM: histidine biosynthesis protein YP_008522723.1 PFAM: histidine biosynthesis protein; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; HAMAP : 1-(5-phosphoribosyl)-5-(5- phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase; KEGG: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase YP_008522724.1 TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; HAMAP : Imidazole glycerol phosphate synthase subunit hisH; KEGG: hisH, imidazole glycerol phosphate synthase subunit HisH; PFAM: Glutamine amidotransferase type 1 YP_008522725.1 PFAM: imidazoleglycerol-phosphate dehydratase; TIGRFAM: histidinol-phosphatase, histidinol-phosphate phosphatase family protein, hydrolase, HAD-superfamily, subfamily IIIA; HAMAP : Imidazoleglycerol-phosphate dehydratase, Histidine biosynthesis bifunctional protein hisB; KEGG: imidazole glycerol-phosphate dehydratase/histidinol phosphatase YP_008522726.1 PFAM: aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase; HAMAP : Histidinol-phosphate aminotransferase; KEGG: histidinol-phosphate aminotransferase YP_008522727.1 PFAM: Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase; HAMAP : Histidinol dehydrogenase; KEGG: histidinol dehydrogenase YP_008522728.1 PFAM: ATP phosphoribosyltransferase catalytic region, Histidine biosynthesis protein HisG domain-containing protein; TIGRFAM: ATP phosphoribosyltransferase, Histidine biosynthesis protein HisG domain-containing protein; HAMAP : ATP phosphoribosyltransferase; KEGG: hisG, ATP phosphoribosyltransferase YP_008522729.1 KEGG: yeeZ, epimerase, with NAD(P)-binding Rossmann-fold domain YP_008522730.1 KEGG: hypothetical protein YP_008522731.1 KEGG: response regulator receiver; PFAM: response regulator receiver; SMART: response regulator receiver YP_008522732.1 KEGG: signal transduction histidine kinase regulating citrate/malate metabolism; PFAM: ATP-binding region ATPase domain protein, PAS domain containing protein; SMART: ATP-binding region ATPase domain protein YP_008522733.1 PFAM: Citrate carrier protein; KEGG: Citrate carrier protein YP_008522734.1 KEGG: 5-carboxymethyl-2-hydroxymuconate delta-isomerase; PFAM: fumarylacetoacetate (FAA) hydrolase YP_008522735.1 SMART: Citrate lyase ligase domain protein; TIGRFAM: citrate lyase ligase, cytidyltransferase-related domain protein; KEGG: citC_2, citrate lyase synthetase; PFAM: Citrate lyase ligase domain protein, GCN5-related N-acetyltransferase YP_008522736.1 TIGRFAM: citrate lyase acyl carrier protein; HAMAP : Citrate lyase acyl carrier protein; KEGG: citrate lyase subunit gamma; PFAM: Malonate decarboxylase/citrate lyase acyl carrier protein YP_008522737.1 TIGRFAM: citrate lyase, beta subunit; KEGG: citrate lyase subunit beta; PFAM: HpcH/HpaI aldolase YP_008522738.1 TIGRFAM: citrate lyase, alpha subunit; KEGG: citF, citrate lyase subunit alpha; PFAM: Citrate lyase alpha subunit YP_008522739.1 TIGRFAM: holo-ACP synthase CitX; KEGG: citX, apo-citrate lyase phosphoribosyl-dephospho-CoA transferase; PFAM: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase YP_008522740.1 PFAM: triphosphoribosyl-dephospho-CoA protein; TIGRFAM: triphosphoribosyl-dephospho-CoA synthase CitG; HAMAP : 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase; KEGG: 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase YP_008522741.1 KEGG: YcgR family protein; HAMAP : Type III secretion system flagellar brake protein YcgR; PFAM: YcgR family protein, type IV pilus assembly PilZ YP_008522743.1 KEGG: amino acid permease-associated protein YP_008522744.1 PFAM: Protein of unknown function DUF2136; KEGG: hypothetical protein YP_008522745.1 KEGG: transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_008522746.1 KEGG: sbcB, exonuclease I; PFAM: Exonuclease domain protein, Exonuclease RNase T and DNA polymerase III YP_008522747.1 KEGG: hypothetical protein; HAMAP : UPF0265 protein yeeX; PFAM: protein of unknown function DUF496 YP_008522748.1 TIGRFAM: DNA internalization-related competence protein ComEC/Rec2, ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein, Domain of unknown function DUF4131, beta-lactamase domain protein; KEGG: DNA internalization-like competence protein ComEC/Rec2; SMART: beta-lactamase domain protein YP_008522749.1 SMART: AAA ATPase; TIGRFAM: lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; KEGG: lipid transporter ATP-binding/permease protein; PFAM: ABC transporter transmembrane region, ABC transporter related protein YP_008522750.1 PFAM: Tetraacyldisaccharide-1-P 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase; HAMAP : Tetraacyldisaccharide 4'-kinase; KEGG: lpxK, tetraacyldisaccharide 4'-kinase YP_008522751.1 KEGG: hypothetical protein; HAMAP : UPF0434 protein ycaR; PFAM: protein of unknown function DUF343 YP_008522752.1 PFAM: acylneuraminate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; HAMAP : 3-deoxy-manno-octulosonate cytidylyltransferase; KEGG: 3-deoxy-manno-octulosonate cytidylyltransferase YP_008522753.1 KEGG: pectate lyase YP_008522754.1 PFAM: aminoglycoside phosphotransferase; KEGG: hypothetical protein YP_008522755.1 PFAM: protein of unknown function DUF218; KEGG: hypothetical protein YP_008522756.1 KEGG: smtA, metallothionein SmtA YP_008522757.1 KEGG: mukF, Ca2+ binding protein; HAMAP : Chromosome partition protein mukF; PFAM: chromosome segregation and condensation protein MukF YP_008522758.1 KEGG: mukE, chromosome condensin subunit; HAMAP : Chromosome partition protein mukE; PFAM: chromosome segregation and condensation protein MukE YP_008522759.1 KEGG: cell division protein MukB; HAMAP : Chromosome partition protein mukB; PFAM: chromosome segregation and condensation protein MukB domain protein YP_008522760.1 PFAM: FAD dependent oxidoreductase; KEGG: FAD dependent oxidoreductase YP_008522761.1 PFAM: multicopper oxidase type 3, multicopper oxidase type 2, multicopper oxidase type 1; KEGG: cueO, blue copper oxidase cueO YP_008522762.1 PFAM: Tellurite resistance methyltransferase, TehB, core; KEGG: methyltransferase type 11 YP_008522763.1 PFAM: helix-turn-helix HxlR type; KEGG: MarR family transcriptional regulator YP_008522764.1 KEGG: FMN oxidoreductase; PFAM: NADH:flavin oxidoreductase/NADH oxidase YP_008522765.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: carboxymuconolactone decarboxylase YP_008522766.1 KEGG: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70 factor, RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein, Sigma-70 region 4 type 2 YP_008522767.1 KEGG: hypothetical protein YP_008522768.1 PFAM: DoxX family protein; KEGG: DoxX family protein YP_008522769.1 PFAM: Protein of unknown function DUF2063; KEGG: hypothetical protein YP_008522770.1 KEGG: hypothetical protein; HAMAP : UPF0276 protein; PFAM: protein of unknown function DUF692 YP_008522771.1 PFAM: Protein of unknown function DUF2282, transmembrane; KEGG: hypothetical protein YP_008522772.1 KEGG: kinase-like protein YP_008522773.1 SMART: Pyruvate-flavodoxin oxidoreductase, EKR domain-containing protein; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein, Pyruvate/ketoisovalerate oxidoreductase, Pyruvate-flavodoxin oxidoreductase, EKR domain-containing protein, 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein, thiamine pyrophosphate TPP-binding domain-containing protein YP_008522774.1 KEGG: putative glutamate synthase (NADPH) small subunit; PFAM: Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain, 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein, FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_008522775.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ribosomal protein N-acetyltransferase YP_008522776.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: transcriptional regulator YP_008522777.1 KEGG: FAD/FMN-dependent dehydrogenase; PFAM: D-lactate dehydrogenase membrane binding protein, FAD linked oxidase domain-containing protein YP_008522778.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: glutathione-dependent formaldehyde-activating protein YP_008522779.1 PFAM: regulatory protein TetR; KEGG: putative TetR family transcriptional regulator YP_008522780.1 KEGG: short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR YP_008522781.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: hypothetical protein YP_008522782.1 PFAM: amidinotransferase; KEGG: hypothetical protein YP_008522783.1 KEGG: putative biotin carboxylase YP_008522784.1 KEGG: phosphoribosylglycinamide synthetase ATP-grasp domain-containing protein YP_008522785.1 PFAM: Oxidoreductase FAD-binding domain protein; KEGG: oxidoreductase FAD/NAD(P)-binding subunit YP_008522786.1 KEGG: hypothetical protein YP_008522788.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: hypothetical protein YP_008522789.1 KEGG: flavin reductase domain-containing protein; PFAM: flavin reductase domain protein FMN-binding protein; SMART: flavin reductase domain protein FMN-binding protein YP_008522790.1 KEGG: tam, trans-aconitate methyltransferase YP_008522791.1 HAMAP : hydrolase ycdX; PFAM: PHP domain protein; KEGG: ycdX, zinc-binding hydrolase; SMART: phosphoesterase PHP domain protein YP_008522792.1 PFAM: TorD-like chaperone; KEGG: cytoplasmic chaperone TorD family protein YP_008522793.1 PFAM: protein of unknown function DUF1439; KEGG: hypothetical protein YP_008522794.1 KEGG: major facilitator superfamily protein; HAMAP : Multidrug resistance protein mdtH; PFAM: major facilitator superfamily MFS_1 YP_008522795.1 KEGG: ribosomal-protein-S5-alanine N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase YP_008522796.1 KEGG: hypothetical protein; HAMAP : UPF0502 protein yceH; PFAM: protein of unknown function DUF480 YP_008522797.1 PFAM: oxidoreductase domain protein; KEGG: oxidoreductase domain-containing protein YP_008522798.1 KEGG: integral membrane protein MviN; TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein YP_008522799.1 KEGG: arginyl-tRNA synthetase; TIGRFAM: arginyl-tRNA synthetase; HAMAP : Arginyl-tRNA synthetase YP_008522800.1 PFAM: protein of unknown function DUF991; KEGG: yecM, metal-binding enzyme YP_008522802.1 KEGG: copper homeostasis protein CutC; HAMAP : Copper homeostasis protein cutC; PFAM: CutC family protein YP_008522803.1 KEGG: hypothetical protein YP_008522804.1 TIGRFAM: methyltransferase; HAMAP : tRNA (mo5U34)-methyltransferase; KEGG: methyltransferase; PFAM: methyltransferase YP_008522805.1 KEGG: methyltransferase; TIGRFAM: methyltransferase; HAMAP : tRNA (cmo5U34)-methyltransferase YP_008522806.1 PFAM: membrane-associated protein in eicosanoid and glutathione metabolism (MAPEG); KEGG: hypothetical protein YP_008522807.1 PFAM: protein of unknown function DUF72; KEGG: hypothetical protein YP_008522808.1 PFAM: tRNA synthetase class II (D K and N), GAD domain protein, nucleic acid binding OB-fold tRNA/helicase-type; TIGRFAM: aspartyl-tRNA synthetase; HAMAP : Aspartyl-tRNA synthetase; KEGG: aspartyl-tRNA synthetase YP_008522809.1 PFAM: NUDIX hydrolase; KEGG: dATP pyrophosphohydrolase YP_008522810.1 TIGRFAM: protein of unknown function DUF28; HAMAP : UPF0082 protein yeeN; KEGG: yebC, hypothetical protein; PFAM: protein of unknown function DUF28 YP_008522811.1 PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC; HAMAP : Crossover junction endodeoxyribonuclease ruvC; KEGG: ruvC, Holliday junction resolvase YP_008522812.1 KEGG: HoxN/HupN/NixA family nickel/cobalt transporter; TIGRFAM: high-affinity nickel-transporter; PFAM: high-affinity nickel-transporter YP_008522813.1 SMART: Helix-hairpin-helix DNA-binding class 1; TIGRFAM: Holliday junction DNA helicase RuvA; KEGG: Holliday junction DNA helicase RuvA; HAMAP : Holliday junction ATP-dependent DNA helicase ruvA; PFAM: DNA recombination protein RuvA domain I, RuvA domain protein YP_008522814.1 SMART: AAA ATPase; TIGRFAM: Holliday junction DNA helicase RuvB; KEGG: ruvB, Holliday junction DNA helicase RuvB; HAMAP : Holliday junction ATP-dependent DNA helicase ruvB; PFAM: Holliday junction DNA helicase RuvB domain-containing protein YP_008522815.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: ABC transporter YP_008522816.1 PFAM: ABC transporter related protein; KEGG: ABC transporter-like protein; SMART: AAA ATPase YP_008522817.1 PFAM: ABC-type metal ion transporter, periplasmic subunit; KEGG: znuA, zinc ABC transporter substrate-binding protein YP_008522818.1 KEGG: hypothetical protein; PFAM: Peptidase M23, Opacity-associated protein A domain protein, Opacity-associated protein A; SMART: Peptidoglycan-binding LysM YP_008522819.1 KEGG: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; TIGRFAM: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; PFAM: lipid A biosynthesis acyltransferase YP_008522820.1 TIGRFAM: pyruvate kinase; KEGG: pyruvate kinase; PFAM: Pyruvate kinase barrel, Pyruvate kinase -like protein YP_008522821.1 PFAM: helix-turn-helix protein RpiR, sugar isomerase (SIS); KEGG: yebK, DNA-binding transcriptional regulator YP_008522822.1 TIGRFAM: glucose-6-phosphate 1-dehydrogenase; KEGG: glucose-6-phosphate 1-dehydrogenase; PFAM: Glucose-6-phosphate dehydrogenase, C-terminal, Glucose-6-phosphate dehydrogenase, NAD-binding YP_008522823.1 TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; KEGG: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase YP_008522824.1 PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; TIGRFAM: phosphoribosylglycinamide formyltransferase 2; HAMAP : Phosphoribosylglycinamide formyltransferase 2; KEGG: purT, phosphoribosylglycinamide formyltransferase 2 YP_008522826.1 KEGG: oligopeptidase B; PFAM: peptidase S9A prolyl oligopeptidase domain protein beta-propeller YP_008522827.1 KEGG: hypothetical protein YP_008522828.1 PFAM: copper resistance protein CopC; KEGG: yobA, protein YobA YP_008522829.1 PFAM: copper resistance D domain protein; KEGG: Copper resistance protein D YP_008522830.1 KEGG: holE, DNA polymerase III subunit theta YP_008522831.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: hypothetical protein YP_008522832.1 PFAM: TENA/THI-4 domain-containing protein; KEGG: hypothetical protein YP_008522833.1 KEGG: aminotransferase; PFAM: aminotransferase class I and II YP_008522834.1 KEGG: hypothetical protein YP_008522835.1 PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: taurine dioxygenase YP_008522836.1 KEGG: biotin carboxylase YP_008522837.1 PFAM: copper resistance D domain protein; KEGG: Copper resistance protein D YP_008522838.1 KEGG: holE, DNA polymerase III subunit theta YP_008522839.1 KEGG: ftnA, ferritin; PFAM: Ferritin Dps family protein YP_008522840.1 PFAM: Protein of unknown function DUF2511; KEGG: hypothetical protein YP_008522841.1 PFAM: integrase family protein; KEGG: Phage integrase YP_008522842.1 TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: yddM, hypothetical protein; SMART: helix-turn-helix domain protein YP_008522843.1 PFAM: plasmid maintenance system killer; KEGG: plasmid maintenance system killer protein YP_008522844.1 KEGG: hypothetical protein YP_008522846.1 KEGG: hypothetical protein YP_008522847.1 KEGG: hypothetical protein YP_008522849.1 PFAM: regulatory protein TetR; KEGG: TetR family transcriptional regulator YP_008522850.1 PFAM: ChrR-like cupin domain; KEGG: anti-ECFsigma factor ChrR YP_008522851.1 PFAM: aconitate hydratase domain-containing protein; KEGG: aconitate hydratase domain-containing protein YP_008522852.1 PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: hypothetical protein YP_008522853.1 KEGG: class I and II aminotransferase; PFAM: aminotransferase class I and II YP_008522854.1 KEGG: lipoprotein YP_008522855.1 PFAM: isochorismatase hydrolase; KEGG: isochorismatase hydrolase YP_008522856.1 PFAM: major facilitator superfamily MFS_1; KEGG: major facilitator superfamily protein YP_008522857.1 KEGG: leuA, 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase YP_008522858.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: antibiotic biosynthesis monooxygenase YP_008522859.1 PFAM: amino acid-binding ACT domain-containing protein; KEGG: ACT domain protein YP_008522860.1 SMART: regulatory protein ArsR; KEGG: ArsR family transcriptional regulator YP_008522861.1 KEGG: hypothetical protein YP_008522862.1 KEGG: hypothetical protein YP_008522863.1 KEGG: pphA, serine/threonine protein phosphatase 1; PFAM: metallophosphoesterase YP_008522864.1 TIGRFAM: diguanylate cyclase, PAS sensor protein; PFAM: GGDEF domain containing protein, GAF domain protein; KEGG: PAS/PAC and GAF sensors-containing diguanylate cyclase; SMART: GGDEF domain containing protein, PAC repeat-containing protein, PAS domain containing protein YP_008522865.1 TIGRFAM: guanine deaminase; KEGG: Guanine deaminase; PFAM: amidohydrolase YP_008522866.1 PFAM: transcriptional activator Ogr/delta; KEGG: transcriptional activator Ogr/delta YP_008522867.1 KEGG: late control D family protein YP_008522868.1 PFAM: P2 GpU family protein; KEGG: P2 GpU family protein YP_008522869.1 KEGG: phage tail tape measure protein; TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: tail tape measure protein TP901 core region-containing protein YP_008522870.1 PFAM: Mu-like prophage FluMu protein gp41; KEGG: tail E family protein YP_008522871.1 KEGG: phage major tail tube protein; TIGRFAM: phage major tail tube protein; PFAM: major tail tube protein YP_008522872.1 KEGG: tail sheath protein YP_008522873.1 KEGG: ydaL, hypothetical protein; PFAM: Smr protein/MutS2; SMART: Smr protein/MutS2 YP_008522874.1 KEGG: hypothetical protein YP_008522875.1 PFAM: tail assembly chaperone gp38; KEGG: tail fiber assembly protein G YP_008522876.1 PFAM: Protein of unknown function DUF3751, tail fiber protein, Tail Collar domain protein; KEGG: Tail fiber protein YP_008522877.1 PFAM: tail assembly chaperone gp38; KEGG: tail assembly chaperone gp38 YP_008522878.1 PFAM: Protein of unknown function DUF3751, tail fiber protein, Tail Collar domain protein; KEGG: Tail fiber protein YP_008522880.1 KEGG: bacteriophage tail fiber assembly protein YP_008522881.1 KEGG: transposase YP_008522882.1 PFAM: acyltransferase 3; KEGG: acyltransferase 3 YP_008522883.1 KEGG: FkbM family methyltransferase; TIGRFAM: methyltransferase FkbM family; PFAM: methyltransferase FkbM domain protein YP_008522884.1 PFAM: tail assembly chaperone gp38; KEGG: tail assembly chaperone gp38 YP_008522885.1 PFAM: Protein of unknown function DUF3751, tail fiber protein, Tail Collar domain protein; KEGG: tail collar domain-containing protein YP_008522886.1 KEGG: phage tail protein I; TIGRFAM: phage tail protein I; PFAM: tail protein I YP_008522887.1 PFAM: Baseplate J family protein; KEGG: Baseplate assembly protein J YP_008522888.1 PFAM: GPW/gp25 family protein; KEGG: GPW/gp25 family protein YP_008522889.1 KEGG: phage baseplate assembly protein V; TIGRFAM: phage baseplate assembly protein V; PFAM: baseplate assembly protein V YP_008522890.1 PFAM: P2 phage tail completion R family protein; KEGG: P2 phage tail completion R family protein YP_008522891.1 TIGRFAM: phage lysis regulatory protein, LysB family; KEGG: putative P2 LysB-like protein YP_008522892.1 PFAM: glycoside hydrolase family 24; KEGG: glycoside hydrolase family protein YP_008522893.1 KEGG: prophage Hp1 family holin YP_008522894.1 PFAM: tail X family protein; KEGG: tail X family protein YP_008522897.1 KEGG: hypothetical protein YP_008522898.1 PFAM: Replication endonuclease; KEGG: replication protein A YP_008522899.1 TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family; KEGG: hypothetical protein YP_008522901.1 KEGG: replication protein B (GpB) YP_008522902.1 PFAM: CI repressor; KEGG: Repressor protein CI YP_008522903.1 PFAM: protein of unknown function DUF1482; KEGG: hypothetical protein YP_008522904.1 KEGG: putative GAF sensor protein; PFAM: GAF domain protein; SMART: GAF domain protein YP_008522905.1 HAMAP : ProP effector; PFAM: Fertility inhibition FinO-like protein; KEGG: putative solute/DNA competence effector; SMART: Fertility inhibition FinO-like protein YP_008522906.1 SMART: peptidase S41, PDZ/DHR/GLGF domain protein; TIGRFAM: carboxyl-terminal protease; KEGG: carboxyl-terminal protease; PFAM: peptidase S41, PDZ/DHR/GLGF domain protein, Peptidase S41A domain-containing protein peptidase-1 domain-containing protein YP_008522907.1 KEGG: Fe2+ transport system protein A; PFAM: FeoA family protein; SMART: FeoA family protein YP_008522908.1 KEGG: FeoA family protein; PFAM: FeoA family protein; SMART: FeoA family protein YP_008522909.1 KEGG: ferrous iron transport protein B; TIGRFAM: ferrous iron transport protein B, small GTP-binding protein; PFAM: Ferrous iron transport protein B domain-containing protein, nucleoside recognition domain protein, Ferrous iron transport B domain-containing protein YP_008522910.1 PFAM: protein of unknown function DUF1920; KEGG: hypothetical protein YP_008522911.1 PFAM: peptidase M20, peptidase dimerization domain protein; TIGRFAM: peptidase T; HAMAP : Peptidase T; KEGG: peptidase T YP_008522912.1 KEGG: Cupin 4 family protein; PFAM: transcription factor jumonji jmjC domain-containing protein; SMART: transcription factor jumonji jmjC domain-containing protein YP_008522913.1 KEGG: phoQ, sensory histidine kinase in two-component regulatory system with PhoP; PFAM: PhoQ Sensor domain protein, histidine kinase HAMP region domain protein, ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_008522914.1 KEGG: pehR, DNA-binding transcriptional regulator PhoP; PFAM: response regulator receiver, transcriptional regulator domain-containing protein; SMART: response regulator receiver, transcriptional regulator domain-containing protein YP_008522915.1 TIGRFAM: adenylosuccinate lyase; KEGG: adenylosuccinate lyase; PFAM: Lyase 1, N-terminal, Adenylosuccinate lyase domain-containing protein YP_008522916.1 KEGG: hypothetical protein; HAMAP : High frequency lysogenization protein hflD; PFAM: Uncharacterized protein family UPF0274 YP_008522917.1 KEGG: methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer, ligand binding Tar domain protein; SMART: chemotaxis sensory transducer YP_008522918.1 TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; HAMAP : tRNA-specific 2-thiouridylase mnmA; KEGG: mnmA, tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase; PFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase YP_008522919.1 PFAM: NUDIX hydrolase; KEGG: NUDIX hydrolase YP_008522920.1 KEGG: pseudouridine synthase; TIGRFAM: pseudouridine synthase Rsu; PFAM: pseudouridine synthase YP_008522921.1 TIGRFAM: isocitrate dehydrogenase, NADP-dependent; KEGG: isocitrate dehydrogenase; PFAM: Isopropylmalate dehydrogenase-like domain YP_008522923.1 TIGRFAM: diguanylate cyclase, PAS sensor protein; PFAM: EAL domain-containing protein, GGDEF domain containing protein, PAS fold domain protein, GAF domain protein; KEGG: sensory box/GGDEF family protein; SMART: EAL domain-containing protein, GAF domain protein, GGDEF domain containing protein, PAS domain containing protein YP_008522924.1 KEGG: heat shock protein HtpX; HAMAP : protease htpX; PFAM: peptidase M48 Ste24p YP_008522925.1 KEGG: oligogalacturonide lyase; PFAM: WD40-like beta Propeller containing protein YP_008522926.1 KEGG: kdgR, DNA-binding transcriptional regulator KdgR; PFAM: Transcriptional regulator IclR , regulatory protein IclR; SMART: regulatory protein IclR YP_008522927.1 PFAM: YebO-like protein; KEGG: hypothetical protein YP_008522928.1 SMART: Threonyl/alanyl tRNA synthetase SAD; TIGRFAM: threonyl-tRNA synthetase; KEGG: threonyl-tRNA synthetase; HAMAP : Threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S), Threonyl/alanyl tRNA synthetase SAD, TGS domain-containing protein, Anticodon-binding domain protein YP_008522929.1 KEGG: translation initiation factor IF-3; TIGRFAM: translation initiation factor IF-3; PFAM: Translation initiation factor 3 YP_008522930.1 TIGRFAM: ribosomal protein L35; HAMAP : 50S ribosomal protein L35; KEGG: rpmI, 50S ribosomal protein L35; PFAM: Ribosomal protein L35 YP_008522931.1 TIGRFAM: ribosomal protein L20; HAMAP : 50S ribosomal protein L20; KEGG: 50S ribosomal protein L20; PFAM: ribosomal protein L20 YP_008522932.1 TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; HAMAP : Phenylalanyl-tRNA synthetase alpha chain; KEGG: pheS, phenylalanyl-tRNA synthetase subunit alpha; PFAM: phenylalanyl-tRNA synthetase class IIc, aminoacyl tRNA synthetase class II domain protein YP_008522933.1 TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; KEGG: pheT, phenylalanyl-tRNA synthetase subunit beta; HAMAP : Phenylalanyl-tRNA synthetase beta chain YP_008522934.1 SMART: histone family protein DNA-binding protein; TIGRFAM: integration host factor, alpha subunit; KEGG: integration host factor subunit alpha; HAMAP : Integration host factor subunit alpha; PFAM: histone family protein DNA-binding protein YP_008522935.1 PFAM: Uncharacterized protein family YgbA; KEGG: ygbA, hypothetical protein YP_008522936.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: hypothetical protein YP_008522937.1 TIGRFAM: NAD+ synthetase; HAMAP : NH(3)-dependent NAD(+) synthetase; KEGG: nadE, NAD synthetase; PFAM: NAD/GMP synthase YP_008522938.1 PFAM: SmpA/OmlA domain-containing protein; KEGG: osmE, Osmotically inducible lipoprotein E YP_008522939.1 PFAM: Protein of unknown function DUF457, transmembrane; KEGG: hypothetical protein YP_008522940.1 KEGG: pectin acetylesterase YP_008522941.1 PFAM: Oligogalacturonate-specific porin; KEGG: kdgM, oligogalacturonate-specific porin YP_008522942.1 PFAM: extracellular solute-binding protein family 1; KEGG: family 1 extracellular solute-binding protein YP_008522943.1 PFAM: ABC transporter related protein, Transport-associated OB domain-containing protein; KEGG: ABC transporter; SMART: AAA ATPase YP_008522944.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: ABC transporter YP_008522945.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: togM, binding-protein-dependent transport system, inner membrane component YP_008522946.1 KEGG: pectate disaccharide-lyase; PFAM: periplasmic pectate lyase YP_008522947.1 TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase; KEGG: 2-deoxy-D-gluconate 3-dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR YP_008522948.1 HAMAP : 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; KEGG: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; PFAM: KduI/IolB isomerase YP_008522949.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: kdgF, Pectin degradation protein kdgF YP_008522950.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; KEGG: 2-deoxyglucose-6-phosphatase YP_008522951.1 PFAM: YniB-like protein; KEGG: yniB, inner membrane protein YP_008522952.1 PFAM: Fructosamine/Ketosamine-3-kinase; KEGG: fructosamine kinase YP_008522953.1 KEGG: cold shock-like protein CspC; PFAM: Cold-shock protein DNA-binding protein; SMART: Cold shock protein YP_008522954.1 KEGG: rRNA (guanine-N(1)-)-methyltransferase YP_008522955.1 KEGG: hypothetical protein; HAMAP : UPF0059 membrane protein yebN; PFAM: protein of unknown function DUF204 YP_008522956.1 KEGG: hypothetical protein; HAMAP : UPF0266 membrane protein yobD; PFAM: protein of unknown function DUF986 YP_008522957.1 KEGG: PTS system mannose-specific transporter subunit IID; TIGRFAM: PTS system, mannose/fructose/sorbose family, IID subunit; PFAM: PTS system mannose/fructose/sorbose family IID component YP_008522958.1 KEGG: PTS system mannose/fructose/sorbose family transporter subunit IIC; TIGRFAM: PTS system, mannose/fructose/sorbose family, IIC subunit; PFAM: phosphotransferase system PTS sorbose-specific IIC subunit YP_008522959.1 TIGRFAM: PTS system, mannose/fructose/sorbose family, IIB subunit, PTS system, mannose/fructose/sorbose family, IIA subunit; KEGG: PTS system mannose/fructose/sorbose family transporter subunit IIB; PFAM: PTS system sorbose subfamily IIB component, PTS system fructose subfamily IIA component YP_008522960.1 KEGG: Integral membrane protein TerC; PFAM: Integral membrane protein TerC, CBS domain containing protein, transporter-associated region; SMART: transporter-associated region YP_008522961.1 TIGRFAM: L-serine dehydratase 1; KEGG: sdaA, L-serine deaminase I; PFAM: serine dehydratase alpha chain, serine dehydratase beta chain YP_008522962.1 PFAM: NUDIX hydrolase; KEGG: yeaB, NUDIX hydrolase YP_008522963.1 TIGRFAM: para-aminobenzoate synthase, subunit I; KEGG: para-aminobenzoate synthase subunit I; PFAM: Chorismate binding domain-containing protein, Anthranilate synthase component I domain protein YP_008522964.1 KEGG: hypothetical protein; HAMAP : UPF0181 protein yoaH; PFAM: protein of unknown function UPF0181 YP_008522965.1 PFAM: Endoribonuclease L-PSP; KEGG: endoribonuclease L-PSP YP_008522966.1 KEGG: yoaA, hypothetical protein; PFAM: helicase c2, type III restriction protein res subunit, DEAD 2 domain-containing protein; SMART: helicase c2, DEAD-like helicase YP_008522967.1 KEGG: peptidase M22 glycoprotease; TIGRFAM: universal protein YeaZ; PFAM: peptidase M22 glycoprotease YP_008522968.1 KEGG: yeaY, lipoprotein; TIGRFAM: outer membrane lipoprotein, Slp family; PFAM: outer membrane lipoprotein Slp YP_008522969.1 KEGG: AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase, Domain of unknown function DUF4009 YP_008522970.1 KEGG: rnd, ribonuclease D; PFAM: 3'-5' exonuclease, HRDC domain protein; TIGRFAM: ribonuclease D; HAMAP : ribonuclease D; SMART: 3'-5' exonuclease, HRDC domain protein YP_008522971.1 TIGRFAM: cell division topological specificity factor MinE; HAMAP : Cell division topological specificity factor; KEGG: cell division topological specificity factor MinE; PFAM: Septum formation topological specificity factor MinE YP_008522972.1 KEGG: septum site-determining protein MinD; TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid ac-diamide synthase YP_008522973.1 TIGRFAM: septum site-determining protein MinC; HAMAP : septum site-determining protein minC; KEGG: septum site-determining protein MinC; PFAM: Septum formation inhibitor MinC, Septum formation inhibitor MinC domain protein YP_008522974.1 KEGG: hypothetical protein; HAMAP : UPF0745 protein ycgL; PFAM: protein of unknown function DUF709 YP_008522975.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: ycgM, isomerase/hydrolase YP_008522976.1 KEGG: hypothetical protein; HAMAP : UPF0260 protein ycgN; PFAM: protein of unknown function UPF0153 YP_008522977.1 PFAM: Protein of unknown function DUF3596, integrase family protein; KEGG: putative phage integrase YP_008522978.1 PFAM: protein of unknown function DUF1233 excisionase; KEGG: putative excisionase YP_008522979.1 TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family; KEGG: hypothetical protein YP_008522981.1 KEGG: DNA-binding protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_008522982.1 KEGG: hypothetical protein YP_008522983.1 PFAM: protein of unknown function DUF1019; KEGG: bacteriophage regulatory protein CII YP_008522984.1 KEGG: Pyocin large subunit-like protein YP_008522985.1 KEGG: phage replication protein YP_008522986.1 KEGG: hypothetical protein YP_008522987.1 KEGG: hypothetical protein YP_008522988.1 KEGG: Methyltransferase YP_008522989.1 PFAM: C-5 cytosine-specific DNA methylase; KEGG: C-5 cytosine-specific DNA methylase YP_008522990.1 KEGG: hypothetical protein YP_008522991.1 PFAM: protein of unknown function DUF1367; KEGG: hypothetical protein YP_008522992.1 PFAM: protein of unknown function DUF1364; KEGG: hypothetical protein YP_008522993.1 PFAM: endodeoxyribonuclease RusA; KEGG: endodeoxyribonuclease RusA YP_008522994.1 PFAM: protein of unknown function DUF1133; KEGG: hypothetical protein YP_008522995.1 PFAM: Uncharacterized protein family UPF0150, helix-turn-helix domain protein; KEGG: XRE family transcriptional regulator YP_008522996.1 PFAM: Lysis S family protein; KEGG: hypothetical protein YP_008522997.1 PFAM: glycoside hydrolase family 24; KEGG: putative phage lysozyme YP_008522998.1 KEGG: hypothetical protein YP_008523000.1 KEGG: hypothetical protein YP_008523001.1 KEGG: hypothetical Protein YP_008523002.1 KEGG: hypothetical protein YP_008523003.1 KEGG: hypothetical protein YP_008523005.1 PFAM: Terminase small subunit; KEGG: hypothetical protein YP_008523007.1 TIGRFAM: phage uncharacterized protein; KEGG: phage protein YP_008523008.1 KEGG: phage-associated protein; TIGRFAM: phage-associated protein, HI1409 family; PFAM: Protein of unknown function DUF1073 YP_008523009.1 KEGG: hypothetical protein; TIGRFAM: phage head morphogenesis protein, SPP1 gp7 family; PFAM: head morphogenesis protein SPP1 gp7 YP_008523010.1 PFAM: Uncharacterized conserved protein UCP029215; KEGG: hypothetical protein YP_008523011.1 KEGG: hypothetical protein YP_008523012.1 PFAM: Protein of unknown function DUF2184; KEGG: hypothetical protein YP_008523014.1 PFAM: Protein of unknown function DUF4054; KEGG: hypothetical protein YP_008523015.1 KEGG: hypothetical protein YP_008523016.1 KEGG: hypothetical protein YP_008523017.1 KEGG: hypothetical protein YP_008523018.1 PFAM: Protein of unknown function DUF3383; KEGG: hypothetical protein YP_008523019.1 KEGG: hypothetical protein YP_008523020.1 KEGG: hypothetical protein YP_008523023.1 PFAM: Phage P22, antirepressor protein; KEGG: ant, phage antirepressor protein YP_008523024.1 PFAM: phage antirepressor protein, KilA, /APSES-type HTH DNA-binding domain-containing protein; KEGG: putative DNA-binding protein (Roi) YP_008523026.1 PFAM: glycoside hydrolase family 24; KEGG: glycoside hydrolase family 24 YP_008523027.1 KEGG: hypothetical protein YP_008523028.1 KEGG: hypothetical protein YP_008523029.1 KEGG: hypothetical protein YP_008523030.1 KEGG: hypothetical protein YP_008523031.1 KEGG: hypothetical protein YP_008523032.1 PFAM: Baseplate J family protein; KEGG: hypothetical protein YP_008523033.1 PFAM: Protein of unknown function DUF2612; KEGG: hypothetical protein YP_008523034.1 KEGG: Ig-like domain-containing protein; PFAM: Tail Collar domain protein; SMART: Ig domain protein group 2 domain protein YP_008523036.1 KEGG: hypothetical protein YP_008523037.1 KEGG: hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00341; PFAM: protein of unknown function DUF389 YP_008523039.1 KEGG: Disulfide bond formation protein DsbB; HAMAP : Disulfide bond formation protein B; PFAM: Disulfide bond formation protein DsbB YP_008523040.1 TIGRFAM: Na+/H+ antiporter NhaB; HAMAP : Na(+)/H(+) antiporter nhaB; KEGG: sodium/proton antiporter; PFAM: Na+H+ antiporter NhaB YP_008523041.1 SMART: regulatory protein GntR HTH; TIGRFAM: fatty acid metabolism transcriptional regulator FadR; KEGG: fatty acid metabolism regulator; HAMAP : Fatty acid metabolism regulator protein; PFAM: fatty acid responsive transcription factor FadR domain protein, regulatory protein GntR HTH YP_008523042.1 PFAM: SpoVR family protein; KEGG: ycgB, hypothetical protein YP_008523043.1 HAMAP : D-amino acid dehydrogenase small subunit; KEGG: D-amino-acid dehydrogenase; PFAM: FAD dependent oxidoreductase YP_008523044.1 KEGG: hypothetical protein; HAMAP : UPF0229 protein yeaH; PFAM: protein of unknown function DUF444 YP_008523045.1 KEGG: serine protein kinase PrkA; PFAM: PrkA AAA domain protein, PrkA serine kinase; SMART: PrkA AAA domain protein YP_008523046.1 KEGG: MltA-interacting MipA family protein; TIGRFAM: outer membrane insertion C-terminal signal; PFAM: MltA-interacting MipA family protein YP_008523047.1 KEGG: yeaE, oxidoreductase; PFAM: NADP-dependent oxidoreductase domain YP_008523048.1 PFAM: Aldose 1-epimerase; KEGG: aldose 1-epimerase YP_008523049.1 SMART: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain-containing protein; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: gapA, glyceraldehyde-3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain-containing protein, Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain-containing protein YP_008523050.1 PFAM: Methionine sulfoxide reductase B; TIGRFAM: methionine-R-sulfoxide reductase; HAMAP : Peptide methionine sulfoxide reductase msrB; KEGG: methionine-R-sulfoxide reductase YP_008523051.1 PFAM: protein of unknown function DUF1315; KEGG: hypothetical protein YP_008523052.1 KEGG: pncA, nicotinamidase/pyrazinamidase; PFAM: isochorismatase hydrolase YP_008523053.1 SMART: Asparaginase/glutaminase; TIGRFAM: L-asparaginase, type I; KEGG: L-asparaginase; PFAM: Asparaginase/glutaminase YP_008523054.1 KEGG: sppA, protease IV; TIGRFAM: signal peptide peptidase SppA, 67K type, signal peptide peptidase SppA, 36K type; PFAM: peptidase S49 YP_008523055.1 PFAM: nitroreductase; KEGG: nitroreductase YP_008523056.1 SMART: DNA topoisomerase I DNA-binding protein, DNA topoisomerase I ATP-binding protein, TOPRIM domain-containing protein; TIGRFAM: DNA topoisomerase III; KEGG: topB, DNA topoisomerase III; PFAM: DNA topoisomerase type IA central domain protein, TOPRIM domain-containing protein YP_008523057.1 PFAM: protein of unknown function DUF1496; KEGG: hypothetical protein YP_008523058.1 TIGRFAM: exodeoxyribonuclease III, exodeoxyribonuclease III Xth; KEGG: exodeoxyribonuclease III; PFAM: Endonuclease/exonuclease/phosphatase YP_008523060.1 PFAM: Uncharacterized protein family UPF0126; KEGG: hypothetical protein YP_008523061.1 TIGRFAM: formyltetrahydrofolate deformylase; KEGG: purU, formyltetrahydrofolate deformylase; PFAM: formyl transferase domain protein, amino acid-binding ACT domain-containing protein YP_008523062.1 KEGG: ychJ, hypothetical protein; HAMAP : UPF0225 protein ychJ; PFAM: SEC-C motif domain protein YP_008523063.1 PFAM: Patatin; KEGG: patatin YP_008523064.1 KEGG: response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_008523065.1 TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; KEGG: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase YP_008523066.1 KEGG: hns, global DNA-binding transcriptional dual regulator H-NS; PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS YP_008523067.1 KEGG: bifunctional acetaldehyde-CoA/alcohol dehydrogenase; PFAM: iron-containing alcohol dehydrogenase, Aldehyde Dehydrogenase YP_008523068.1 KEGG: ychE, hypothetical protein; TIGRFAM: multiple antibiotic resistance (MarC)-related protein; PFAM: multiple antibiotic resistance (MarC)-related protein YP_008523069.1 PFAM: ABC-type transporter, periplasmic subunit; KEGG: extracellular solute-binding protein family 5 YP_008523070.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transporter inner membrane component YP_008523071.1 PFAM: ABC-type transporter, integral membrane subunit, Oligopeptide transport permease C-like, N-terminal domain; KEGG: binding-protein-dependent transport systems inner membrane component YP_008523072.1 SMART: AAA ATPase; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: oppD, oligopeptide ABC transporter ATP-binding protein; PFAM: Oligopeptide/dipeptide ABC transporter domain protein, ABC transporter related protein YP_008523073.1 SMART: AAA ATPase; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: peptide ABC transporter ATPase; PFAM: ABC transporter related protein, Oligopeptide/dipeptide ABC transporter domain protein YP_008523074.1 KEGG: yciU, hypothetical protein; HAMAP : UPF0263 protein yciU; PFAM: dsDNA mimic family protein YP_008523075.1 SMART: phospholipase D/Transphosphatidylase; TIGRFAM: Cardiolipin synthase; KEGG: phospholipase D/transphosphatidylase; HAMAP : Cardiolipin synthase; PFAM: Phospholipase D-like domain YP_008523076.1 KEGG: hypothetical protein YP_008523077.1 KEGG: methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer, ligand binding Tar domain protein, histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer, histidine kinase HAMP region domain protein, ligand binding Tar domain protein YP_008523078.1 PFAM: YCII-related protein; KEGG: hypothetical protein YP_008523079.1 KEGG: transport protein TonB; TIGRFAM: TonB family protein; PFAM: TonB domain-containing protein YP_008523080.1 PFAM: thioesterase superfamily protein; KEGG: acyl-CoA thioester hydrolase YP_008523081.1 TIGRFAM: intracellular septation protein A; HAMAP : intracellular septation protein; KEGG: intracellular septation protein A; PFAM: Intracellular septation protein A YP_008523082.1 KEGG: yciC, inner membrane protein; HAMAP : UPF0259 membrane protein yciC; PFAM: protein of unknown function UPF0259 YP_008523083.1 PFAM: protein of unknown function UPF0153; KEGG: ykgJ, Ferredoxin YP_008523084.1 PFAM: OmpW family protein; KEGG: outer membrane protein W YP_008523085.1 PFAM: tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit; HAMAP : Tryptophan synthase alpha chain; KEGG: tryptophan synthase subunit alpha YP_008523086.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; TIGRFAM: tryptophan synthase, beta subunit; HAMAP : Tryptophan synthase beta chain; KEGG: trpB, tryptophan synthase subunit beta YP_008523087.1 HAMAP : N-(5'-phosphoribosyl)anthranilate isomerase, Indole-3-glycerol phosphate synthase; KEGG: trpC, Indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase; PFAM: Indole-3-glycerol phosphate synthase, N-(5 phosphoribosyl)anthranilate isomerase YP_008523088.1 PFAM: glycosyl transferase family 3, Glycosyl transferase, family 3; TIGRFAM: anthranilate phosphoribosyltransferase; HAMAP : Anthranilate phosphoribosyltransferase; KEGG: trpD, anthranilate phosphoribosyltransferase YP_008523089.1 TIGRFAM: glutamine amidotransferase of anthranilate synthase; KEGG: glutamine amidotransferase of anthranilate synthase; PFAM: Glutamine amidotransferase type 1 YP_008523090.1 TIGRFAM: anthranilate synthase component I; KEGG: trpE, component I of anthranilate synthase; PFAM: Chorismate binding domain-containing protein, Anthranilate synthase component I domain protein YP_008523091.1 KEGG: yciV, hypothetical protein; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein YP_008523092.1 KEGG: yciO, RNA-binding protein; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain-containing protein YP_008523093.1 TIGRFAM: pseudouridine synthase Rsu; PFAM: pseudouridine synthase, RNA-binding S4 domain protein; KEGG: 23S rRNA pseudouridylate synthase B; SMART: RNA-binding S4 domain protein YP_008523094.1 TIGRFAM: cob(I)alamin adenosyltransferase; KEGG: cob(I)yrinic acid a,c-diamide adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP, Cob(I)alamin adenosyltransferase N-terminal domain YP_008523095.1 KEGG: short chain dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR YP_008523096.1 PFAM: Peptidase S49 domain protein, peptidase S49; KEGG: peptidase S49 domain-containing protein YP_008523097.1 PFAM: Methyltransferase type 11; KEGG: type 11 methyltransferase YP_008523098.1 PFAM: Protein of unknown function DUF2498; KEGG: hypothetical protein YP_008523099.1 SMART: DNA topoisomerase I DNA-binding protein, TOPRIM domain-containing protein, DNA topoisomerase I ATP-binding protein; TIGRFAM: DNA topoisomerase I; KEGG: topA, DNA topoisomerase I subunit omega; PFAM: DNA topoisomerase type IA central domain protein, TOPRIM domain-containing protein, DNA topoisomerase type IA zn finger domain protein, DNA topoisomerase I zinc ribbon domain protein YP_008523101.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: transcriptional regulator CysB YP_008523102.1 TIGRFAM: amino acid/peptide transporter; HAMAP : Amino acid/peptide transporter family, dipeptide and tripeptide permease A; KEGG: tppB, tripeptide transporter permease; PFAM: TGF-beta receptor type I/II extracellular region YP_008523103.1 SMART: HhH-GPD family protein, iron-sulfur cluster loop; TIGRFAM: endonuclease III; KEGG: endonuclease III; PFAM: HhH-GPD family protein, helix-hairpin-helix motif, iron-sulfur cluster loop YP_008523104.1 TIGRFAM: electron transport complex, RnfABCDGE type, E subunit; HAMAP : Electron transport complex protein rnfE; KEGG: electron transport complex, RnfABCDGE type subunit E; PFAM: RnfA-Nqr electron transport subunit YP_008523105.1 SMART: FMN-binding domain protein; TIGRFAM: electron transport complex, RnfABCDGE type, G subunit; KEGG: RnfABCDGE type electron transport complex subunit G; HAMAP : Electron transport complex protein rnfG; PFAM: FMN-binding domain protein YP_008523106.1 TIGRFAM: electron transport complex, RnfABCDGE type, D subunit; HAMAP : Electron transport complex protein rnfD; KEGG: rsxD, inner membrane oxidoreductase; PFAM: NQR2 and RnfD family protein YP_008523107.1 TIGRFAM: electron transport complex, RnfABCDGE type, C subunit; HAMAP : Electron transport complex protein rnfC; KEGG: RnfABCDGE type electron transport complex subunit C; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit, RnfC Barrel sandwich hybrid domain, Soluble ligand binding domain-containing protein, 4Fe-4S ferredoxin, iron-sulpur binding domain-containing protein YP_008523108.1 TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; HAMAP : Electron transport complex protein rnfB; KEGG: RnfABCDGE type electron transport complex subunit B; PFAM: Fe-S cluster domain protein, 4Fe-4S ferredoxin, iron-sulpur binding domain-containing protein YP_008523109.1 TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; HAMAP : Electron transport complex protein rnfA; KEGG: RnfABCDGE type electron transport complex subunit alpha; PFAM: RnfA-Nqr electron transport subunit YP_008523110.1 HAMAP : L-arabinose isomerase; KEGG: L-arabinose isomerase; PFAM: L-arabinose isomerase, L-arabinose isomerase, C-terminal YP_008523111.1 PFAM: Carbohydrate kinase, FGGY; TIGRFAM: L-ribulokinase; HAMAP : Ribulokinase; KEGG: L-ribulokinase YP_008523112.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: periplasmic binding protein/LacI transcriptional regulator YP_008523113.1 PFAM: ABC transporter related protein; KEGG: L-arabinose transporter ATP-binding protein; SMART: AAA ATPase YP_008523114.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: L-arabinose transporter permease YP_008523115.1 KEGG: AraC family transcriptional regulator; PFAM: AraC protein arabinose-binding/dimerization, Helix-turn-helix, AraC domain-containing protein; SMART: Helix-turn-helix, AraC domain-containing protein YP_008523116.1 PFAM: oxidoreductase domain protein, Oxidoreductase domain-containing protein; KEGG: oxidoreductase domain-containing protein YP_008523117.1 PFAM: Uncharacterized conserved protein UCP026166, sodium bile acid symporter; KEGG: Bile acid:sodium symporter YP_008523118.1 SMART: AAA ATPase; TIGRFAM: alternate F1F0 ATPase, F1 subunit beta, ATP synthase F1, beta subunit; KEGG: F0F1 ATP synthase subunit beta; HAMAP : ATP synthase subunit beta; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region, H+transporting two-sector ATPase alpha/beta subunit domain protein YP_008523119.1 KEGG: H+-transporting two-sector ATPase subunit delta/epsilon; TIGRFAM: alternate F1F0 ATPase, F1 subunit epsilon; PFAM: ATPase, F1 complex, delta/epsilon subunit YP_008523120.1 TIGRFAM: F0F1-ATPase subunit; KEGG: F0F1-ATPase subunit YP_008523121.1 TIGRFAM: F1/F0 ATPase, Methanosarcina type, subunit 2; KEGG: F1/F0 ATPase, Methanosarcina type subunit 2 YP_008523122.1 TIGRFAM: alternate F1F0 ATPase, F0 subunit A; HAMAP : ATP synthase subunit a; KEGG: ATP synthase subunit a; PFAM: H+transporting two-sector ATPase A subunit YP_008523123.1 TIGRFAM: alternate F1F0 ATPase, F0 subunit C, ATP synthase F0, C subunit; HAMAP : ATP synthase subunit c; KEGG: F0F1 ATP synthase subunit C; PFAM: H+transporting two-sector ATPase C subunit YP_008523124.1 TIGRFAM: alternate F1F0 ATPase, F0 subunit B; HAMAP : ATP synthase subunit b; KEGG: ATP synthase F0 subcomplex B subunit; PFAM: H+transporting two-sector ATPase B/B' subunit YP_008523125.1 TIGRFAM: alternate F1F0 ATPase, F1 subunit alpha, ATP synthase F1, alpha subunit; HAMAP : ATP synthase subunit alpha; KEGG: alternate F1F0 ATPase F1 subunit alpha; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region, H+transporting two-sector ATPase alpha/beta subunit domain protein YP_008523126.1 KEGG: H+-transporting two-sector ATPase subunit gamma; TIGRFAM: alternate F1F0 ATPase, F1 subunit gamma; PFAM: H+transporting two-sector ATPase gamma subunit YP_008523127.1 PFAM: Calcium/calmodulin dependent protein kinase II association-domain protein; KEGG: calcium/calmodulin dependent protein kinase II association-domain-containing protein YP_008523128.1 PFAM: adenosine/AMP deaminase; TIGRFAM: adenosine deaminase; HAMAP : Adenosine deaminase; KEGG: adenosine deaminase YP_008523129.1 PFAM: protein of unknown function DUF945; KEGG: hypothetical protein YP_008523130.1 TIGRFAM: mannose-6-phosphate isomerase, class I; KEGG: mannose-6-phosphate isomerase, class I; PFAM: mannose-6-phosphate isomerase type I YP_008523131.1 PFAM: Lyase 1, N-terminal, Fumarase C; TIGRFAM: fumarate hydratase, class II; HAMAP : Fumarate hydratase class II; KEGG: fumarate hydratase, class II YP_008523132.1 PFAM: ROK family protein; KEGG: transcriptional regulator/sugar kinase YP_008523133.1 PFAM: major facilitator superfamily MFS_1; KEGG: major facilitator superfamily transporter YP_008523134.1 KEGG: tus, inhibitor of replication at Ter, DNA-binding protein; TIGRFAM: DNA replication terminus site-binding protein; PFAM: site-binding protein DNA replication region YP_008523135.1 PFAM: major facilitator superfamily MFS_1; KEGG: major facilitator superfamily protein YP_008523136.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: ynfL, DNA-binding transcriptional regulator YP_008523137.1 PFAM: ROK family protein, Iron dependent repressor, N-terminal; KEGG: ROK family protein YP_008523138.1 KEGG: putative dithiobiotin synthetase; TIGRFAM: dethiobiotin synthase; HAMAP : Dethiobiotin synthetase YP_008523139.1 PFAM: protein of unknown function DUF1283; KEGG: hypothetical protein YP_008523140.1 PFAM: protein of unknown function UPF0118; KEGG: hypothetical protein YP_008523141.1 SMART: cation transporting ATPase domain protein; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; KEGG: ctpF, cation-transporting P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein, cation transporting ATPase domain protein, Haloacid dehalogenase domain protein hydrolase YP_008523142.1 KEGG: 3-hydroxy acid dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR YP_008523143.1 PFAM: NADP-dependent oxidoreductase domain; KEGG: putative oxidoreductase, aryl-alcohol dehydrogenase like protein YP_008523144.1 KEGG: hypothetical protein YP_008523145.1 TIGRFAM: mannosyl-3-phosphoglycerate phosphatase family, HAD-superfamily hydrolase, subfamily IIB; KEGG: mannosyl-3-phosphoglycerate phosphatase family; PFAM: Haloacid dehalogenase domain protein hydrolase type 3 YP_008523146.1 PFAM: Uncharacterized protein family YjbD; KEGG: hypothetical protein YP_008523147.1 PFAM: Protein of unknown function DUF2257; KEGG: hypothetical protein YP_008523148.1 KEGG: glyA, serine hydroxymethyltransferase; PFAM: glycine hydroxymethyltransferase YP_008523149.1 KEGG: hypothetical protein YP_008523150.1 KEGG: SC3F9.10, hypothetical protein; PFAM: Xylose isomerase domain-containing protein TIM barrel; SMART: AP endonuclease family 2 YP_008523151.1 PFAM: AzlC family protein; KEGG: AzlC-like YP_008523152.1 PFAM: branched-chain amino acid transport YP_008523154.1 PFAM: Protein of unknown function DUF2971; KEGG: hypothetical protein YP_008523155.1 SMART: Polyketide synthase, phosphopantetheine-binding protein; TIGRFAM: amino acid adenylation domain protein; KEGG: non ribosomal peptide synthetase; PFAM: AMP-dependent synthetase and ligase, condensation domain protein, acyl carrier protein familyprotein, Thioesterase YP_008523157.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: hypothetical protein YP_008523158.1 PFAM: Lytic transglycosylase catalytic; KEGG: lytic murein transglycosylase YP_008523159.1 KEGG: AraC family transcriptional regulator; PFAM: DJ-1 domain, InhA-type, Helix-turn-helix, AraC domain-containing protein; SMART: Helix-turn-helix, AraC domain-containing protein YP_008523160.1 SMART: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain-containing protein; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: glyceraldehyde-3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain-containing protein, Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain-containing protein YP_008523161.1 KEGG: parallel beta-helix repeat-containing protein YP_008523162.1 PFAM: glycoside hydrolase family 5, Carbohydrate-binding family V/XII; KEGG: cel5Z, endo-1,4-beta-glucanase; SMART: Carbohydrate-binding family V/XII YP_008523163.1 KEGG: ytfG, hypothetical protein YP_008523164.1 PFAM: helix-turn-helix HxlR type; KEGG: transcriptional regulator YP_008523165.1 KEGG: virulence effector protein YP_008523166.1 PFAM: virulence protein SrfB; KEGG: virulence protein SrfB YP_008523167.1 PFAM: Virulence effector protein SrfC; KEGG: virulence factor YP_008523168.1 KEGG: hypothetical protein YP_008523169.1 KEGG: yjiR, putative transcriptional regulator; PFAM: aminotransferase class I and II, regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_008523170.1 KEGG: hypothetical protein YP_008523172.1 KEGG: hypothetical protein YP_008523173.1 PFAM: formyl transferase domain protein; KEGG: hypothetical protein YP_008523174.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: lysine exporter protein (LysE/YggA) YP_008523175.1 PFAM: inositol monophosphatase; KEGG: Myo-inositol-1(or 4)-monophosphatase YP_008523176.1 KEGG: glycerophosphoryl diester phosphodiesterase; PFAM: glycerophosphoryl diester phosphodiesterase YP_008523177.1 KEGG: family 1 extracellular solute-binding protein YP_008523178.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: ABC transporter of substrate X, permease subunit II YP_008523179.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transporters inner membrane component YP_008523180.1 PFAM: ABC transporter related protein; KEGG: ABC transporter of substrate X, ATP-binding subunit; SMART: AAA ATPase YP_008523181.1 PFAM: ROK family protein; KEGG: ROK family protein YP_008523182.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, response regulator receiver, PAS fold-3 domain protein, Hpt domain protein, histidine kinase A domain protein; KEGG: multi-sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein, response regulator receiver, PAC repeat-containing protein, PAS domain containing protein, histidine kinase A domain protein YP_008523183.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: LysR family transcriptional regulator YP_008523184.1 PFAM: Phenolic acid decarboxylase; KEGG: phenolic acid decarboxylase YP_008523185.1 KEGG: hypothetical protein YP_008523186.1 KEGG: hypothetical protein; HAMAP : UPF0386 protein yjhX; PFAM: Protein of unknown function DUF2084 YP_008523187.1 KEGG: methyltransferase YP_008523188.1 KEGG: Crp/Fnr family transcriptional regulator; PFAM: regulatory protein Crp, cyclic nucleotide-binding protein; SMART: cyclic nucleotide-binding protein, regulatory protein Crp YP_008523189.1 PFAM: UspA domain-containing protein; KEGG: universal stress protein UspE YP_008523190.1 KEGG: NAD(P)(+) transhydrogenase; PFAM: NADP transhydrogenase beta subunit YP_008523191.1 TIGRFAM: NAD(P) transhydrogenase, alpha subunit; PFAM: alanine dehydrogenase/PNT domain protein, NAD(P) transhydrogenase, alpha subunit, C-terminal; KEGG: NAD(P) transhydrogenase subunit alpha; SMART: alanine dehydrogenase/PNT domain protein YP_008523193.1 PFAM: protein of unknown function DUF1471; KEGG: hypothetical protein YP_008523194.1 PFAM: DAHP synthetase I/KDSA; TIGRFAM: 2-dehydro-3-deoxyphosphooctonate aldolase; HAMAP : 2-dehydro-3-deoxyphosphooctonate aldolase; KEGG: 2-dehydro-3-deoxyphosphooctonate aldolase YP_008523195.1 KEGG: transcriptional regulator YP_008523196.1 KEGG: HemK family modification methylase; TIGRFAM: protein-(glutamine-N5) methyltransferase, release factor-specific, modification methylase, HemK family; HAMAP : Protein-(glutamine-N5) methyltransferase, release factor-specific YP_008523197.1 SMART: PCRF domain protein; TIGRFAM: peptide chain release factor 1; KEGG: prfA, peptide chain release factor 1; HAMAP : Peptide chain release factor 1; PFAM: Class I peptide chain release factor, PCRF domain protein YP_008523198.1 TIGRFAM: glutamyl-tRNA reductase; HAMAP : Glutamyl-tRNA reductase; KEGG: glutamyl-tRNA reductase; PFAM: Tetrapyrrole biosynthesis protein, glutamyl-tRNA reductase, Shikimate/quinate 5-dehydrogenase YP_008523199.1 TIGRFAM: outer membrane lipoprotein LolB; HAMAP : Outer-membrane lipoprotein lolB; KEGG: lolB, outer membrane lipoprotein LolB; PFAM: outer membrane lipoprotein LolB YP_008523200.1 PFAM: GHMP kinase, GHMP kinase domain protein; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; HAMAP : 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; KEGG: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase YP_008523201.1 PFAM: phosphoribosyltransferase; TIGRFAM: ribose-phosphate pyrophosphokinase; HAMAP : Ribose-phosphate pyrophosphokinase; KEGG: ribose-phosphate pyrophosphokinase YP_008523202.1 PFAM: Protein of unknown function DUF2583; KEGG: ychH, inner membrane protein YP_008523203.1 PFAM: peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase; HAMAP : Peptidyl-tRNA hydrolase; KEGG: pth, peptidyl-tRNA hydrolase YP_008523204.1 KEGG: GTP-dependent nucleic acid-binding protein EngD; TIGRFAM: GTP-binding protein YchF; PFAM: protein of unknown function DUF933, GTP1/OBG protein YP_008523206.1 KEGG: PepSY-associated TM helix domain-containing protein YP_008523207.1 PFAM: Protein of unknown function DUF2946; KEGG: hypothetical protein YP_008523208.1 TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490, HAD-superfamily hydrolase, subfamily IB (PSPase-like); KEGG: HAD hydrolase, IB family YP_008523209.1 KEGG: hypothetical protein YP_008523210.1 PFAM: stress protein; KEGG: tellurium resistance protein TerF YP_008523212.1 PFAM: stress protein; KEGG: terE, tellurite resistance protein YP_008523213.1 PFAM: stress protein; KEGG: terD, tellurium resistance protein terD YP_008523214.1 KEGG: terC, tellurium resistance protein TerC; TIGRFAM: integral membrane protein, TerC family; PFAM: Integral membrane protein TerC YP_008523215.1 PFAM: Tellurite resistance TerB; KEGG: protein TerB YP_008523216.1 PFAM: Tellurium resistance, stress protein; KEGG: hypothetical protein YP_008523217.1 PFAM: stress protein, Tellurium resistance; KEGG: hypothetical protein YP_008523218.1 KEGG: hypothetical protein YP_008523219.1 PFAM: Domain of unknown function DUF3706; KEGG: hypothetical protein YP_008523220.1 KEGG: hypothetical protein YP_008523221.1 PFAM: protein of unknown function UCP020979; KEGG: hypothetical protein YP_008523222.1 KEGG: hypothetical protein YP_008523223.1 KEGG: tellurium resistance protein TerW YP_008523224.1 KEGG: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase YP_008523225.1 PFAM: ABC-type transporter, integral membrane subunit, Oligopeptide transport permease C-like, N-terminal domain; KEGG: binding-protein-dependent transporter inner membrane component YP_008523226.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: oppB, oligopeptide ABC transporter permease YP_008523227.1 PFAM: ABC-type transporter, periplasmic subunit; KEGG: family 5 extracellular solute-binding protein YP_008523228.1 SMART: AAA ATPase; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: peptide ABC transporter ATPase; PFAM: Oligopeptide/dipeptide ABC transporter domain protein, ABC transporter related protein YP_008523229.1 SMART: AAA ATPase; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: peptide ABC transporter ATPase; PFAM: Oligopeptide/dipeptide ABC transporter domain protein, ABC transporter related protein YP_008523230.1 KEGG: GntR family transcriptional regulator; PFAM: GntR domain protein, regulatory protein GntR HTH; SMART: GntR domain protein, regulatory protein GntR HTH YP_008523232.1 KEGG: ABC transporter ATP-binding protein; PFAM: ABC transporter related protein; SMART: AAA ATPase YP_008523233.1 KEGG: DeoR family transcriptional regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_008523234.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; KEGG: HAD-superfamily hydrolase YP_008523235.1 KEGG: carbohydrate kinase; PFAM: Carbohydrate kinase, FGGY YP_008523236.1 KEGG: photosystem I assembly BtpA; TIGRFAM: photosystem I assembly BtpA; PFAM: photosystem I assembly BtpA YP_008523237.1 KEGG: estradiol 17-beta-dehydrogenase 8; PFAM: short-chain dehydrogenase/reductase SDR YP_008523238.1 PFAM: ABC transporter related protein, Transport-associated OB domain-containing protein; KEGG: ABC transporter; SMART: AAA ATPase YP_008523239.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transport system inner membrane protein YP_008523240.1 KEGG: family 1 extracellular solute-binding protein YP_008523241.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transporters inner membrane component YP_008523242.1 PFAM: Tir chaperone family protein; KEGG: DspFAvrF family protein YP_008523243.1 PFAM: Pathogenicity factor; KEGG: dspE, protein DspE YP_008523244.1 KEGG: pectate lyase; PFAM: Pectate lyase YP_008523245.1 KEGG: potential HrpW-specific chaperone YP_008523246.1 KEGG: licR, phosphotransferase system mannitol/fructose-specific IIA domain; PFAM: PRD domain protein, M trans-acting positive regulator, phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 YP_008523247.1 KEGG: hypothetical protein; TIGRFAM: protein of unknown function DUF1341; PFAM: protein of unknown function DUF1341 YP_008523248.1 KEGG: selA, L-seryl-tRNA(Sec) selenium transferase; TIGRFAM: pyridoxal phosphate-dependent enzyme; PFAM: Pyridoxal phosphate-dependent transferase YP_008523249.1 TIGRFAM: Amidohydrolase; KEGG: amidohydrolase YP_008523250.1 KEGG: inner membrane protein; TIGRFAM: Protein of unknown function DUF4310; PFAM: Protein of unknown function DUF4310 YP_008523251.1 KEGG: hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP03580; PFAM: Conserved hypothetical protein CHP03580 YP_008523252.1 KEGG: hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP03578; PFAM: Conserved hypothetical protein CHP03578 YP_008523253.1 KEGG: hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP03577; PFAM: Conserved hypothetical protein CHP03577 YP_008523254.1 TIGRFAM: PRD domain-containing protein, EF0829/AHA3910; KEGG: PRD domain-containing protein YP_008523255.1 PFAM: YrhK domain; KEGG: hypothetical protein YP_008523256.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: Fe3+ ABC transporter permease YP_008523257.1 KEGG: extracellular solute-binding protein YP_008523258.1 PFAM: ABC transporter related protein; KEGG: ABC transporter; SMART: AAA ATPase YP_008523260.1 PFAM: FAD dependent oxidoreductase; KEGG: hypothetical protein YP_008523261.1 KEGG: hypothetical protein; PFAM: ASCH domain protein; SMART: ASCH domain protein YP_008523262.1 PFAM: Domain of unknown function DUF1813 HSP20-like protein; KEGG: hypothetical protein YP_008523263.1 PFAM: plasmid stabilization system; KEGG: plasmid stabilization system protein YP_008523264.1 KEGG: CC2985 family addiction module antidote protein; TIGRFAM: addiction module antidote protein, CC2985 family; PFAM: Uncharacterized protein family UPF0156/MetJ /Arc repressor YP_008523265.1 PFAM: Domain of unknown function DUF1813 HSP20-like protein; KEGG: hypothetical protein YP_008523266.1 KEGG: hypothetical protein YP_008523267.1 KEGG: hypothetical protein YP_008523268.1 KEGG: hypothetical protein YP_008523269.1 PFAM: protein of unknown function DUF638 hemagglutinin/hemolysin; KEGG: filamentous hemagglutinin family outer membrane protein YP_008523270.1 PFAM: Hemagluttinin repeat; KEGG: hecA2, member of ShlA/HecA/FhaA exoprotein family YP_008523271.1 KEGG: hypothetical protein YP_008523272.1 KEGG: adhesin/hemagglutinin/hemolysin YP_008523273.1 PFAM: integrase family protein; KEGG: xerC, site-specific tyrosine recombinase XerC YP_008523274.1 PFAM: TOPRIM domain-containing protein, DNA primase catalytic core domain-containing protein; KEGG: zinc finger CHC2-family protein YP_008523275.1 KEGG: hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_008523276.1 PFAM: Domain of unknown function DUF1813 HSP20-like protein; KEGG: hypothetical protein YP_008523277.1 KEGG: hypothetical protein YP_008523278.1 TIGRFAM: filamentous hemagglutinin family outer membrane protein, adhesin HecA family; PFAM: filamentous hemagglutinin domain protein, protein of unknown function DUF638 hemagglutinin/hemolysin , Hemagluttinin repeat; KEGG: filamentous hemagglutinin family outer membrane protein; SMART: filamentous hemagglutinin domain protein YP_008523279.1 PFAM: Hemolysin activator HlyB domain protein, Polypeptide-transport-associated domain protein ShlB-type; KEGG: polypeptide-transport-associated domain-containing protein ShlB-type YP_008523280.1 PFAM: HrpZ family protein; KEGG: hrpN, Harpin hrpN YP_008523281.1 KEGG: hypothetical protein YP_008523282.1 KEGG: type III secretion outer membrane pore, YscC/HrcC family; TIGRFAM: type III secretion outer membrane pore, YscC/HrcC family; PFAM: type II and III secretion system protein, NolW domain protein, TraK family protein YP_008523283.1 KEGG: hrpG, HrpG protein YP_008523284.1 PFAM: HrpF family protein; KEGG: hrpF, HrpF protein YP_008523285.1 KEGG: hrpE, HrpE protein; TIGRFAM: type III secretion apparatus protein, HrpE/YscL family; PFAM: HrpE family protein YP_008523286.1 KEGG: hrpD, HrpD protein YP_008523287.1 KEGG: type III secretion apparatus lipoprotein, YscJ/HrcJ family; TIGRFAM: type III secretion apparatus lipoprotein, YscJ/HrcJ family; PFAM: secretory protein YscJ/FliF family protein YP_008523288.1 PFAM: Type III secretion, needle-protein like protein; KEGG: hrpB, HrpB protein YP_008523289.1 KEGG: type III secretion protein YP_008523290.1 KEGG: hrpS, HrpS type III protein secretion system regulatory protein; PFAM: sigma-54 factor interaction domain-containing protein, helix-turn-helix Fis-type; SMART: AAA ATPase YP_008523291.1 KEGG: LuxR family two component transcriptional regulator; PFAM: response regulator receiver, regulatory protein LuxR; SMART: response regulator receiver, regulatory protein LuxR YP_008523292.1 TIGRFAM: PAS sensor protein; PFAM: histidine kinase dimerization and phosphoacceptor region, PAS fold-4 domain protein, ATP-binding region ATPase domain protein; KEGG: hrpX, type III protein secretion system sensor kinase; SMART: ATP-binding region ATPase domain protein, PAS domain containing protein YP_008523293.1 KEGG: hrpL, RNA polymerase sigma-54 factor rpoN; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2, sigma-70 region 2 domain protein YP_008523294.1 KEGG: hrpJ, type III secretion protein; TIGRFAM: type III secretion regulator YopN/LcrE/InvE/MxiC, type III secretion effector delivery regulator, TyeA family; PFAM: Hypersensitivity response secretion HrpJ domain protein, TyeA domain-containing protein YP_008523295.1 KEGG: hrcV, type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV); TIGRFAM: type III secretion protein, HrcV family; PFAM: type III secretion FHIPEP protein YP_008523296.1 PFAM: Forkhead-associated protein; KEGG: type III secretion apparatus protein, YscD/HrpQ family YP_008523297.1 SMART: AAA ATPase; TIGRFAM: type III secretion apparatus H+-transporting two-sector ATPase, ATPase, FliI/YscN family; KEGG: type III secretion apparatus H+-transporting two-sector ATPase; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region, H+transporting two-sector ATPase alpha/beta subunit domain protein YP_008523298.1 KEGG: hrpO, HrpO protein YP_008523299.1 KEGG: hrpP, type III secretion system protein YP_008523300.1 PFAM: surface presentation of antigens (SPOA) protein; KEGG: type III secretion system apparatus protein YscQ/HrcQ YP_008523301.1 KEGG: hrcR, type III secretion inner membrane protein; TIGRFAM: Yop virulence translocation R; PFAM: type III secretion system inner membrane P protein YP_008523302.1 KEGG: hrcS, type III secretion system protein; TIGRFAM: type III secretion protein, HrpO family; PFAM: export protein FliQ family 3 YP_008523303.1 KEGG: hrcT, type III secretion inner membrane protein; TIGRFAM: type III secretion protein SpaR/YscT/HrcT; PFAM: type III secretion system inner membrane R protein YP_008523304.1 KEGG: hrcU, type III secretion inner membrane protein; TIGRFAM: type III secretion protein, YscU/HrpY family; PFAM: type III secretion exporter YP_008523305.1 PFAM: SbmABacA family protein; KEGG: sbmA, SbmA protein YP_008523306.1 PFAM: TQO small subunit DoxD domain-containing protein, TQO small subunit DoxA domain-containing protein; KEGG: putative terminal quinol oxidase, subunit DoxD YP_008523307.1 KEGG: hypothetical protein YP_008523308.1 KEGG: hypothetical protein YP_008523309.1 KEGG: hypothetical protein YP_008523310.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transport systems inner membrane component YP_008523311.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transporter inner membrane component YP_008523312.1 KEGG: family 1 extracellular solute-binding protein YP_008523313.1 TIGRFAM: succinic semialdehyde dehydrogenase; KEGG: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_008523314.1 TIGRFAM: 4-aminobutyrate aminotransferase; KEGG: 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III YP_008523315.1 KEGG: GntR family transcriptional regulator; PFAM: aminotransferase class I and II, regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_008523316.1 SMART: AAA ATPase; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; KEGG: ydcT, ABC transporter ATPase; PFAM: ABC transporter related protein, Transport-associated OB domain-containing protein YP_008523317.1 PFAM: Transglycosylase-associated protein; KEGG: hypothetical protein YP_008523319.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: transcriptional regulator YP_008523320.1 SMART: Polyketide synthase, acyl transferase domain-containing protein; TIGRFAM: malonate decarboxylase, epsilon subunit; KEGG: malonate decarboxylase, epsilon subunit; PFAM: Acyl transferase YP_008523321.1 TIGRFAM: holo-ACP synthase, malonate decarboxylase-specific; KEGG: phosphoribosyl-dephospho-CoA transferase; PFAM: Holo-ACP synthase, malonate decarboxylase-specific YP_008523322.1 PFAM: Auxin Efflux Carrier; KEGG: auxin efflux carrier YP_008523323.1 KEGG: malonate decarboxylase, gamma subunit; TIGRFAM: malonate decarboxylase, gamma subunit; PFAM: malonate decarboxylase gamma subunit YP_008523324.1 KEGG: malonate decarboxylase, beta subunit; TIGRFAM: malonate decarboxylase, beta subunit; PFAM: carboxyl transferase YP_008523325.1 TIGRFAM: malonate decarboxylase acyl carrier protein; HAMAP : Malonate decarboxylase acyl carrier protein; KEGG: malonate decarboxylase acyl carrier protein; PFAM: Malonate decarboxylase/citrate lyase acyl carrier protein YP_008523326.1 PFAM: triphosphoribosyl-dephospho-CoA protein; TIGRFAM: triphosphoribosyl-dephospho-CoA synthase MdcB; HAMAP : Triphosphoribosyl-dephospho-CoA synthas, MdcB; KEGG: triphosphoribosyl-dephospho-CoA synthase MdcB YP_008523327.1 TIGRFAM: malonate decarboxylase, alpha subunit; KEGG: malonate decarboxylase, alpha subunit YP_008523328.1 TIGRFAM: respiratory nitrate reductase, gamma subunit; KEGG: respiratory nitrate reductase subunit gamma; PFAM: Nitrate reductase gamma subunit YP_008523329.1 TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; KEGG: nitrate reductase molybdenum cofactor assembly chaperone; PFAM: TorD-like chaperone YP_008523330.1 TIGRFAM: nitrate reductase, beta subunit; KEGG: nitrate reductase subunit beta; PFAM: 4Fe-4S ferredoxin, iron-sulpur binding domain-containing protein YP_008523331.1 SMART: molybdopterin oxidoreductase Fe4S4 region; TIGRFAM: nitrate reductase, alpha subunit; KEGG: nitrate reductase subunit alpha; PFAM: molybdopterin oxidoreductase, molybdopterin dinucleotide-binding region YP_008523332.1 KEGG: nitrite transporter; TIGRFAM: nitrite transporter; PFAM: major facilitator superfamily MFS_1 YP_008523333.1 KEGG: nitrate/nitrite sensor protein NarX; PFAM: histidine kinase dimerization and phosphoacceptor region, histidine kinase HAMP region domain protein, ATP-binding region ATPase domain protein; SMART: histidine kinase HAMP region domain protein, ATP-binding region ATPase domain protein YP_008523334.1 KEGG: transcriptional regulator NarL; PFAM: response regulator receiver, regulatory protein LuxR; SMART: response regulator receiver, regulatory protein LuxR YP_008523335.1 PFAM: acyltransferase 3; KEGG: acyltransferase YP_008523336.1 PFAM: protein of unknown function DUF481; KEGG: peptide chain release factor RF-3 YP_008523337.1 PFAM: ChaC family protein; KEGG: chaC, cation transport protein chac YP_008523338.1 KEGG: sulfate transporter YchM; TIGRFAM: sulfate transporter; PFAM: sulfate transporter, Sulfate transporter/antisigma-factor antagonist STAS YP_008523339.1 KEGG: hypothetical protein YP_008523340.1 KEGG: short chain dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR YP_008523341.1 KEGG: rstA, two component system DNA-binding response regulator; PFAM: response regulator receiver, transcriptional regulator domain-containing protein; SMART: response regulator receiver, transcriptional regulator domain-containing protein YP_008523342.1 KEGG: integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein, histidine kinase HAMP region domain protein, histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein, histidine kinase HAMP region domain protein, histidine kinase A domain protein YP_008523343.1 KEGG: Acid shock repeat-containing protein YP_008523344.1 KEGG: peptidase S1 and S6 chymotrypsin/Hap; PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: peptidase S1 and S6 chymotrypsin/Hap YP_008523345.1 TIGRFAM: ATP-dependent helicase HrpA; PFAM: RNA helicase, ATP-dependent DEAH box, HrpA, C-terminal, protein of unknown function DUF1605, type II secretion system protein E, helicase-associated domain protein, helicase domain-containing protein; KEGG: ATP-dependent helicase HrpA; SMART: helicase-associated domain protein, AAA ATPase, helicase domain-containing protein, DEAD-like helicase YP_008523346.1 KEGG: azoreductase; HAMAP : FMN-dependent NADH-azoreductase; PFAM: NAD(P)H dehydrogenase (quinone) YP_008523347.1 PFAM: YnbE-like lipoprotein; KEGG: ynbE, lipoprotein YP_008523348.1 PFAM: Dicarboxylate transport; KEGG: hypothetical protein YP_008523349.1 TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer, histidine kinase HAMP region domain protein, PAS fold-3 domain protein; KEGG: methyl-accepting chemotaxis sensory transducer; SMART: chemotaxis sensory transducer YP_008523350.1 TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer, histidine kinase HAMP region domain protein; KEGG: methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor; SMART: chemotaxis sensory transducer YP_008523351.1 KEGG: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein, D-isomer specific 2-hydroxyacid dehydrogenase catalytic region-containing protein YP_008523352.1 PFAM: protein of unknown function DUF333; KEGG: hypothetical protein YP_008523353.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: transcriptional regulator YP_008523354.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; KEGG: putative dinucleotide-binding enzyme YP_008523355.1 KEGG: C32 tRNA thiolase; HAMAP : tRNA 2-thiocytidine biosynthesis protein TtcA; PFAM: PP-loop domain protein YP_008523356.1 PFAM: Mg2 transporter protein CorA family protein; KEGG: zntB, zinc transporter YP_008523357.1 PFAM: ABC-type transporter, periplasmic subunit; KEGG: extracellular solute-binding protein family 5 YP_008523358.1 KEGG: hypothetical protein YP_008523359.1 PFAM: peptidase M14 carboxypeptidase A; KEGG: mpaA, murein peptide amidase A YP_008523360.1 KEGG: redoxin domain-containing protein; HAMAP : thiol peroxidase; PFAM: Redoxin domain protein YP_008523361.1 PFAM: major facilitator superfamily MFS_1; KEGG: major facilitator superfamily (MFS) transporter YP_008523362.1 SMART: helix-turn-helix domain protein; KEGG: DNA-binding protein YP_008523363.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ribosomal-protein-serine acetyltransferase YP_008523364.1 KEGG: transcriptional regulator TyrR; PFAM: sigma-54 factor interaction domain-containing protein, PAS domain containing protein; SMART: PAS domain containing protein, AAA ATPase YP_008523365.1 PFAM: peptidase dimerization domain protein, peptidase M20; KEGG: peptidase dimerization domain-containing protein YP_008523366.1 TIGRFAM: Conserved hypothetical protein CHP01620; HAMAP : UPF0283 membrane protein ycjF; KEGG: hypothetical protein; PFAM: Uncharacterized protein family UPF0283 YP_008523367.1 PFAM: protein of unknown function DUF463 YcjX family protein; KEGG: hypothetical protein YP_008523368.1 KEGG: pspC, DNA-binding transcriptional activator PspC; TIGRFAM: phage shock protein C; PFAM: PspC domain protein YP_008523369.1 KEGG: phage shock protein B; TIGRFAM: phage shock protein B; PFAM: shock B family protein YP_008523370.1 KEGG: pspA, phage shock protein PspA; TIGRFAM: phage shock protein A; PFAM: PspA/IM30 family protein YP_008523371.1 TIGRFAM: psp operon transcriptional activator; PFAM: sigma-54 factor interaction domain-containing protein, helix-turn-helix Fis-type; KEGG: pspF, DNA-binding transcriptional activator; SMART: AAA ATPase YP_008523372.1 KEGG: cobalamin synthesis protein; PFAM: cobalamin synthesis protein P47K, cobalamin synthesis CobW domain protein; SMART: cobalamin synthesis CobW domain protein YP_008523373.1 PFAM: ABC-type transporter, periplasmic subunit; KEGG: family 5 extracellular solute-binding protein YP_008523374.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transport systems inner membrane component YP_008523375.1 PFAM: ABC-type transporter, integral membrane subunit, Oligopeptide transport permease C-like, N-terminal domain; KEGG: binding-protein-dependent transport systems inner membrane component YP_008523376.1 SMART: AAA ATPase; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter related protein, Oligopeptide/dipeptide ABC transporter domain protein YP_008523377.1 PFAM: ABC transporter related protein; KEGG: ABC transporter-like protein; SMART: AAA ATPase YP_008523378.1 KEGG: short-chain dehydrogenase/reductase SDR YP_008523379.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: hydrogen peroxide-inducible genes activator YP_008523380.1 TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; KEGG: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase, molybdopterin dinucleotide-binding region YP_008523381.1 KEGG: exoribonuclease II; PFAM: ribonuclease II, Ribonuclease B OB region domain-containing protein, RNA binding S1 domain protein; TIGRFAM: exoribonuclease II, VacB and RNase II family 3'-5' exoribonuclease; HAMAP : Exoribonuclease 2; SMART: ribonuclease II, Cold shock protein YP_008523382.1 PFAM: NADP-dependent oxidoreductase domain; KEGG: aldo/keto reductase YP_008523383.1 SMART: class II aldolase/adducin family protein; TIGRFAM: L-ribulose-5-phosphate 4-epimerase; KEGG: L-ribulose-5-phosphate 4-epimerase; PFAM: class II aldolase/adducin family protein YP_008523384.1 PFAM: 17 kDa surface antigen; KEGG: hypothetical protein YP_008523385.1 KEGG: translation initiation factor SUI1; TIGRFAM: translation initiation factor SUI1; PFAM: translation initiation factor SUI1 YP_008523386.1 KEGG: pyrF, orotidine-5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; TIGRFAM: orotidine 5'-phosphate decarboxylase; HAMAP : Orotidine 5'-phosphate decarboxylase subfamily 1 core; SMART: Orotidine 5'-phosphate decarboxylase YP_008523387.1 KEGG: tetratricopeptide repeat protein YP_008523388.1 PFAM: protein of unknown function DUF1049; KEGG: hypothetical protein YP_008523389.1 PFAM: phosphoesterase PA-phosphatase related protein; KEGG: pgpB, phosphatidylglycerophosphatase B; SMART: phosphoesterase PA-phosphatase related protein YP_008523390.1 PFAM: GTP cyclohydrolase II; TIGRFAM: GTP cyclohydrolase II; HAMAP : GTP cyclohydrolase-2; KEGG: ribA, GTP cyclohydrolase II YP_008523391.1 TIGRFAM: aconitate hydratase 1; KEGG: aconitate hydratase 1; PFAM: aconitate hydratase domain-containing protein YP_008523392.1 PFAM: Glutathione S-transferase domain-containing protein; KEGG: Glutathione S-transferase domain-containing protein YP_008523393.1 PFAM: Phosphomethylpyrimidine kinase type-1; TIGRFAM: pyridoxal kinase; HAMAP : Pyridoxamine kinase; KEGG: pyridoxal kinase YP_008523394.1 KEGG: tyrosine tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib, RNA-binding S4 domain protein; TIGRFAM: tyrosyl-tRNA synthetase; HAMAP : Tyrosyl-tRNA synthetase; SMART: RNA-binding S4 domain protein YP_008523395.1 PFAM: pyridoxamine 5-phosphate oxidase-related FMN-binding protein, Pyridoxine 5'-phosphate oxidase, dimerization; TIGRFAM: pyridoxamine 5'-phosphate oxidase; HAMAP : Pyridoxine/pyridoxamine 5'-phosphate oxidase; KEGG: pyridoxamine 5'-phosphate oxidase YP_008523396.1 PFAM: Protein of unknown function DUF2091, periplasmic; KEGG: ydhA, outer membrane lipoprotein YP_008523397.1 KEGG: anhydro-N-acetylmuramic acid kinase; HAMAP : Anhydro-N-acetylmuramic acid kinase; PFAM: protein of unknown function UPF0075 YP_008523398.1 PFAM: 17 kDa surface antigen; KEGG: 17 kDa surface antigen YP_008523399.1 HAMAP : Transcriptional regulator slyA; PFAM: regulatory protein MarR; KEGG: transcriptional regulator SlyA; SMART: regulatory protein MarR YP_008523400.1 PFAM: protein of unknown function DUF1289; KEGG: ydhL, hypothetical protein YP_008523402.1 TIGRFAM: lactoylglutathione lyase; KEGG: lactoylglutathione lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase YP_008523403.1 SMART: Exonuclease; TIGRFAM: ribonuclease T; KEGG: ribonuclease T; HAMAP : Ribonuclease T; PFAM: Exonuclease RNase T and DNA polymerase III YP_008523404.1 KEGG: glutaredoxin-like protein; TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin YP_008523405.1 PFAM: NLP/P60 protein; KEGG: ydhO, lipoprotein YP_008523406.1 HAMAP : HTH-type transcriptional repressor purR; PFAM: regulatory protein LacI; KEGG: purR, DNA-binding transcriptional repressor PurR; SMART: regulatory protein LacI YP_008523407.1 KEGG: cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase YP_008523408.1 TIGRFAM: riboflavin synthase, alpha subunit; KEGG: riboflavin synthase subunit alpha; PFAM: Lumazine-binding domain YP_008523409.1 KEGG: multidrug efflux protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE YP_008523410.1 PFAM: Thioesterase; KEGG: oleoyl-ACP hydrolase YP_008523411.1 TIGRFAM: amino acid adenylation domain protein; KEGG: amino acid adenylation protein; PFAM: AMP-dependent synthetase and ligase, condensation domain protein, Domain of unknown function DUF4009, Thioesterase, acyl carrier protein familyprotein YP_008523412.1 SMART: Polyketide synthase, phosphopantetheine-binding protein; TIGRFAM: amino acid adenylation domain protein; KEGG: amino acid adenylation protein; PFAM: AMP-dependent synthetase and ligase, condensation domain protein, acyl carrier protein familyprotein; overlaps another CDS with the same product name YP_008523413.1 SMART: Polyketide synthase, phosphopantetheine-binding protein; TIGRFAM: amino acid adenylation domain protein; KEGG: amino acid adenylation protein; PFAM: AMP-dependent synthetase and ligase, acyl carrier protein familyprotein, condensation domain protein; overlaps another CDS with the same product name YP_008523414.1 SMART: AAA ATPase; TIGRFAM: cyclic peptide transporter; KEGG: cyclic peptide transporter; PFAM: ABC transporter related protein YP_008523415.1 PFAM: peptidase S45 penicillin amidase; KEGG: peptidase S45 penicillin amidase YP_008523416.1 KEGG: ornithine cyclodeaminase/mu-crystallin; TIGRFAM: Diaminopropionate biosynthesis, SbnB; PFAM: ornithine cyclodeaminase/mu-crystallin YP_008523417.1 TIGRFAM: Diaminopropionate biosynthesis, SbnA; KEGG: pyridoxal-5'-phosphate-dependent protein subunit beta; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_008523418.1 PFAM: GCN5-related N-acetyltransferase; KEGG: N-acetyltransferase GCN5 YP_008523420.1 PFAM: esterase, glycoside hydrolase family 13 domain protein; KEGG: glycoside hydrolase family 13 domain-containing protein YP_008523421.1 PFAM: porin LamB type, Protein of unknown function DUF3205; KEGG: yieC, maltoporin YP_008523422.1 KEGG: glycoside hydrolase; PFAM: glycoside hydrolase family 1 YP_008523423.1 TIGRFAM: PTS system, beta-glucoside-specific IIABC subunit, PTS system, glucose subfamily, IIA subunit; KEGG: PTS system beta-glucoside-specific transporter subunit IIABC; PFAM: sugar-specific permease EIIA 1 domain-containing protein, Phosphotransferase system EIIB/cysteine, phosphorylation site, phosphotransferase system EIIC YP_008523424.1 KEGG: transcriptional antiterminator BglG; PFAM: PRD domain protein, CAT RNA-binding domain protein; SMART: CAT RNA-binding domain protein YP_008523425.1 TIGRFAM: pyruvate kinase; KEGG: pyruvate kinase; PFAM: Pyruvate kinase barrel, Pyruvate kinase -like protein YP_008523426.1 PFAM: LPP repeat-containing protein; KEGG: LPP repeat-containing protein YP_008523427.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: ErfK/YbiS/YcfS/YnhG family protein YP_008523429.1 KEGG: sufE, cysteine desufuration protein SufE; HAMAP : Cysteine desulfuration protein sufE; PFAM: Fe-S metabolism associated SufE YP_008523430.1 PFAM: aminotransferase class V; TIGRFAM: cysteine desulfurase, SufS subfamily; HAMAP : Cysteine desulfurase; KEGG: sufS, bifunctional cysteine desulfurase/selenocysteine lyase YP_008523431.1 KEGG: cysteine desulfurase activator complex subunit SufD; TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein YP_008523432.1 TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related protein; KEGG: FeS assembly ATPase SufC; SMART: AAA ATPase YP_008523433.1 KEGG: cysteine desulfurase activator complex subunit SufB; TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein YP_008523434.1 KEGG: sufA, Fe-S cluster assembly protein; TIGRFAM: FeS assembly scaffold SufA, iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein YP_008523435.1 KEGG: hypothetical protein YP_008523436.1 KEGG: thioesterase superfamily protein; TIGRFAM: phenylacetic acid degradation-related protein; PFAM: thioesterase superfamily protein YP_008523437.1 KEGG: FAD linked oxidase domain-containing protein; PFAM: FAD linked oxidase domain protein, 4Fe-4S ferredoxin, iron-sulpur binding domain-containing protein, FAD linked oxidase domain-containing protein YP_008523438.1 PFAM: protein of unknown function UPF0118; KEGG: hypothetical protein YP_008523440.1 TIGRFAM: phosphoenolpyruvate synthase; KEGG: phosphoenolpyruvate synthase; PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding protein, PEP-utilizing protein, PEP-utilising protein mobile region YP_008523441.1 KEGG: hypothetical protein; HAMAP : phosphotransferase ydiA; PFAM: protein of unknown function DUF299 YP_008523442.1 TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA YP_008523443.1 KEGG: ribosome modulation factor; HAMAP : ribosome modulation factor; PFAM: ribosome modulation factor YP_008523444.1 PFAM: protein of unknown function DUF330; KEGG: lipoprotein YP_008523445.1 PFAM: Mammalian cell entry related domain protein; KEGG: paraquat-inducible protein B YP_008523446.1 KEGG: PqiA family integral membrane protein; TIGRFAM: integral membrane protein, PqiA family; PFAM: Paraquat-inducible protein A YP_008523447.1 KEGG: ABC transporter ATPase; PFAM: ABC transporter related protein; SMART: AAA ATPase YP_008523448.1 SMART: THUMP domain-containing protein; HAMAP : Ribosomal RNA large subunit methyltransferase L; KEGG: rlmL, 23S rRNA m(2)G2445 methyltransferase; PFAM: RNA methylase, S-adenosylmethionine-dependent methyltransferase, THUMP domain-containing protein YP_008523449.1 PFAM: MOSC domain containing protein, ferredoxin, MOSC domain protein beta barrel domain protein; KEGG: MOSC domain-containing protein YP_008523450.1 KEGG: hypothetical protein; HAMAP : protein of unknown function DUF1379; PFAM: protein of unknown function DUF1379 YP_008523451.1 PFAM: dihydroorotate oxidase; TIGRFAM: dihydroorotate dehydrogenase; HAMAP : Dihydroorotate dehydrogenase; KEGG: pyrD, dihydro-orotate oxidase, FMN-linked YP_008523452.1 TIGRFAM: aminopeptidase N; KEGG: pepN, aminopeptidase N; PFAM: Peptidase M1, alanyl aminopeptidase, C-terminal, Peptidase M1 membrane alanine aminopeptidase YP_008523453.1 TIGRFAM: nicotinate phosphoribosyltransferase; HAMAP : Nicotinate phosphoribosyltransferase; KEGG: nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like protein YP_008523454.1 PFAM: tRNA synthetase class II (D K and N), nucleic acid binding OB-fold tRNA/helicase-type; TIGRFAM: asparaginyl-tRNA synthetase; HAMAP : Asparaginyl-tRNA synthetase; KEGG: asparaginyl-tRNA synthetase YP_008523455.1 PFAM: porin Gram-negative type; KEGG: porin YP_008523456.1 PFAM: porin Gram-negative type; KEGG: porin YP_008523457.1 KEGG: aspartate transaminase; PFAM: aminotransferase class I and II YP_008523458.1 KEGG: beta-lactamase domain-containing protein; PFAM: beta-lactamase domain protein; SMART: beta-lactamase domain protein YP_008523460.1 PFAM: protein of unknown function DUF882; KEGG: hypothetical protein YP_008523461.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein, Peptidoglycan-binding domain 1 protein; KEGG: ycbB, carboxypeptidase YP_008523462.1 KEGG: hypothetical protein; HAMAP : UPF0061 protein ydiU; PFAM: protein of unknown function UPF0061 YP_008523463.1 KEGG: hypothetical protein; PFAM: EAL domain-containing protein; SMART: EAL domain-containing protein YP_008523464.1 TIGRFAM: lipoyltransferase and lipoate-protein ligase; HAMAP : Lipoate-protein ligase A; KEGG: lplA, Lipoate-protein ligase A; PFAM: Lipoate protein ligase, biotin/lipoate A/B protein ligase YP_008523465.1 PFAM: NLP/P60 protein; KEGG: NLP/P60 protein YP_008523466.1 SMART: AAA ATPase; HAMAP : Vitamin B12 import ATP-binding protein btuD; KEGG: btuD, vitamin B12 ABC transporter ATP-binding protein; PFAM: ABC transporter related protein YP_008523467.1 KEGG: peroxiredoxin; PFAM: glutathione peroxidase YP_008523468.1 KEGG: vtamin B12-transporter permease; HAMAP : Vitamin B12 import system permease protein btuC; PFAM: ABC-type transporter, integral membrane subunit YP_008523469.1 KEGG: hypothetical protein YP_008523470.1 KEGG: NAD-dependent deacetylase; HAMAP : NAD-dependent deacetylase; PFAM: Silent information regulator protein Sir2 YP_008523471.1 HAMAP : N-acetyl-D-glucosamine kinase; KEGG: ROK family protein; PFAM: ROK family protein YP_008523472.1 KEGG: lipoprotein releasing system, transmembrane protein LolE; TIGRFAM: lipoprotein releasing system, transmembrane protein LolE, lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: MacB-like periplasmic core domain, protein of unknown function DUF214 YP_008523473.1 SMART: AAA ATPase; TIGRFAM: lipoprotein releasing system, ATP-binding protein; KEGG: lolD, outer membrane-specific lipoprotein ABC transporter ATP-binding protein; PFAM: ABC transporter related protein YP_008523474.1 KEGG: lolC, outer membrane-specific lipoprotein ABC transporter; TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: MacB-like periplasmic core domain, protein of unknown function DUF214 YP_008523475.1 TIGRFAM: transcription-repair coupling factor; PFAM: TRCF domain protein, DEAD/DEAH box helicase domain protein, helicase domain-containing protein, transcription factor CarD; KEGG: mfd, transcription-repair coupling factor; SMART: transcription factor CarD, DEAD-like helicase , TRCF domain protein, helicase domain-containing protein YP_008523476.1 KEGG: diguanylate phosphodiesterase; PFAM: EAL domain-containing protein, Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain; SMART: EAL domain-containing protein YP_008523477.1 PFAM: Heat shock protein 70; KEGG: yegD, chaperone YP_008523478.1 PFAM: N-acetyltransferase; KEGG: N-acetyltransferase YP_008523479.1 KEGG: alpha-glucosidase; PFAM: glycoside hydrolase family 31, Glycoside hydrolase family 31, N-terminal domain YP_008523480.1 PFAM: major facilitator superfamily MFS_1; KEGG: hexuronate transporter YP_008523481.1 KEGG: LacI family transcriptional regulator; PFAM: regulatory protein LacI; SMART: regulatory protein LacI YP_008523482.1 PFAM: 17 kDa surface antigen; KEGG: ycfJ, hypothetical protein YP_008523483.1 KEGG: FAD-dependent pyridine nucleotide-disulfide oxidoreductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain, FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_008523484.1 KEGG: YcfP protein: probably an esterase that is part of a salvage cluster; HAMAP : UPF0227 protein ycfP; PFAM: protein of unknown function UPF0227 YP_008523485.1 KEGG: nagZ, beta-hexosaminidase; HAMAP : Beta-hexosaminidase; PFAM: glycoside hydrolase family 3 domain protein YP_008523486.1 PFAM: aminoglycoside phosphotransferase; KEGG: thiK, thiamin kinase YP_008523487.1 TIGRFAM: membrane lipoprotein lipid attachment site; HAMAP : Uncharacterized conserved lipoprotein, UCP02722; KEGG: ycfM, outer membrane lipoprotein; PFAM: Uncharacterized conserved lipoprotein, UCP02722 YP_008523488.1 PFAM: histidine triad (HIT) protein; KEGG: purine nucleoside phosphoramidase YP_008523489.1 KEGG: malate/L-lactate dehydrogenase; PFAM: Malate/L-lactate dehydrogenase YP_008523490.1 TIGRFAM: PTS system, glucose-specific IIBC subunit, PTS system, glucose-like IIB subunint, PTS system, maltose and glucose-specific subfamily, IIC subunit; KEGG: ptsG, PTS system glucose-specific transporter subunits IIBC; PFAM: phosphotransferase system EIIC, Phosphotransferase system EIIB/cysteine, phosphorylation site YP_008523491.1 KEGG: metallodependent hydrolase; TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease YP_008523492.1 KEGG: DNA polymerase III subunit delta'; TIGRFAM: DNA polymerase III, delta prime subunit; PFAM: DNA polymerase III delta subunit YP_008523493.1 TIGRFAM: thymidylate kinase; HAMAP : Thymidylate kinase; KEGG: thymidylate kinase YP_008523494.1 KEGG: aminodeoxychorismate lyase; TIGRFAM: aminodeoxychorismate lyase; PFAM: aminodeoxychorismate lyase; overlaps another CDS with the same product name YP_008523495.1 TIGRFAM: aminodeoxychorismate lyase; KEGG: 4-amino-4-deoxychorismate lyase; PFAM: aminotransferase class IV; overlaps another CDS with the same product name YP_008523496.1 SMART: Polyketide synthase, beta-ketoacyl synthase region-containing protein; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; KEGG: 3-oxoacyl-(acyl carrier protein) synthase II; PFAM: Beta-ketoacyl synthase YP_008523497.1 TIGRFAM: acyl carrier protein; HAMAP : Acyl carrier protein; KEGG: acpP, acyl carrier protein; PFAM: acyl carrier protein familyprotein YP_008523498.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; KEGG: 3-oxoacyl-ACP reductase; SMART: Polyketide synthase/Fatty acid synthase, KR YP_008523499.1 SMART: Polyketide synthase, acyl transferase domain-containing protein; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; KEGG: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase YP_008523500.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain-containing protein, 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; HAMAP : 3-oxoacyl-[acyl-carrier-protein] synthase 3; KEGG: 3-oxoacyl-(acyl-carrier-protein) synthase III YP_008523501.1 TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; HAMAP : Phosphate acyltransferase; KEGG: plsX, fatty acid/phospholipid synthesis protein; PFAM: fatty acid synthesis plsX protein YP_008523502.1 TIGRFAM: ribosomal protein L32; HAMAP : 50S ribosomal protein L32; KEGG: rpmF, 50S ribosomal protein L32; PFAM: ribosomal L32p protein YP_008523503.1 PFAM: protein of unknown function DUF177; KEGG: yceD, hypothetical protein YP_008523504.1 TIGRFAM: maf protein; HAMAP : Septum formation protein Maf; KEGG: maf protein; PFAM: Maf family protein YP_008523505.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase, RNA-binding S4 domain protein; KEGG: rluC, 23S rRNA pseudouridylate synthase C; SMART: RNA-binding S4 domain protein YP_008523506.1 TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA-binding protein AU-1/Ribonuclease E/G, RNA binding S1 domain protein, Polyribonucleotide phosphorylase; KEGG: rne, RNase E; SMART: RNA-binding domain, S1 YP_008523507.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: antibiotic biosynthesis monooxygenase YP_008523508.1 PFAM: amidohydrolase; TIGRFAM: dihydroorotase, homodimeric type; HAMAP : Dihydroorotase; KEGG: pyrC, dihydro-orotase YP_008523509.1 PFAM: DinI family protein; KEGG: DNA damage-inducible protein I YP_008523510.1 PFAM: Biofilm regulator BssS; KEGG: bssS, biofilm formation regulatory protein BssS YP_008523511.1 HAMAP : UPF0176 protein yceA; PFAM: Rhodanese-like protein; KEGG: hypothetical protein; SMART: Rhodanese-like protein YP_008523512.1 KEGG: lipid A biosynthesis lauroyl acyltransferase; TIGRFAM: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase; PFAM: lipid A biosynthesis acyltransferase YP_008523513.1 KEGG: mdtG, putative drug efflux system; HAMAP : Multidrug resistance protein mdtG; PFAM: major facilitator superfamily MFS_1 YP_008523514.1 KEGG: opgH, glucans biosynthesis glucosyltransferase H; HAMAP : Glucans biosynthesis glucosyltransferase H; PFAM: glycosyl transferase family 2 YP_008523515.1 KEGG: periplasmic glucan biosynthesis protein MdoG; HAMAP : Glucans biosynthesis protein G; PFAM: periplasmic glucan biosynthesis protein MdoG YP_008523516.1 KEGG: methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer, histidine kinase HAMP region domain protein, 4HB MCP domain; SMART: chemotaxis sensory transducer, histidine kinase HAMP region domain protein YP_008523518.1 KEGG: hypothetical protein YP_008523519.1 PFAM: Protein of unknown function DUF2566; KEGG: hypothetical protein YP_008523520.1 PFAM: protein of unknown function DUF523; KEGG: hypothetical protein YP_008523521.1 KEGG: hypothetical protein; HAMAP : UPF0268 protein ycbG; PFAM: protein of unknown function DUF1047 YP_008523522.1 PFAM: peptidase S16 lon domain protein; KEGG: ycbZ, peptidase YP_008523523.1 PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA; HAMAP : 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase; KEGG: 3-hydroxydecanoyl-(acyl carrier protein) dehydratase YP_008523524.1 PFAM: Ribose/galactose isomerase, Sugar-phosphate isomerase domain-containing protein; KEGG: hypothetical protein YP_008523525.1 KEGG: short-chain dehydrogenase/reductase family oxidoreductase; PFAM: short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR YP_008523526.1 KEGG: esterase YP_008523527.1 PFAM: regulatory protein TetR; KEGG: regulatory protein TetR YP_008523528.1 PFAM: Glyoxalase-like domain; KEGG: hypothetical protein YP_008523529.1 PFAM: PhoH family protein; KEGG: phoH, hypothetical protein YP_008523531.1 KEGG: flagella biosynthesis protein FliZ; TIGRFAM: flagellar regulatory protein FliZ; PFAM: integrase domain protein SAM domain protein YP_008523532.1 KEGG: fliA, flagellar biosynthesis sigma factor; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family, RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein, sigma-70 region 3 domain protein, sigma-70 region 2 domain protein YP_008523533.1 PFAM: glycosyl transferase family 2, Radical SAM domain protein; KEGG: beta-D-1,6 glucosyltransferase YP_008523534.1 PFAM: oxidoreductase domain protein; KEGG: oxidoreductase YP_008523535.1 KEGG: carbamoyl-phosphate synthase small subunit YP_008523536.1 KEGG: hypothetical protein YP_008523537.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: vioA, Nucleotide sugar transaminase YP_008523539.1 KEGG: glycosyl transferase family protein YP_008523540.1 PFAM: glycosyl transferase family 2; KEGG: glycosyl transferase Group 2 family protein YP_008523541.1 PFAM: flagellin domain protein; KEGG: fliC, flagellin YP_008523542.1 PFAM: flagellar hook-associated 2 domain-containing protein, flagellar hook-associated protein 2 domain-containing protein; KEGG: fliD, flagellar capping protein YP_008523543.1 KEGG: flagellar protein FliS; TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS YP_008523544.1 PFAM: flagellar export chaperone; KEGG: flagellar export chaperone YP_008523545.1 TIGRFAM: flagellar hook-basal body complex subunit FliE; HAMAP : Flagellar hook-basal body complex protein fliE; KEGG: flagellar hook-basal body protein FliE; PFAM: flagellar hook-basal body complex protein FliE YP_008523546.1 KEGG: fliF, flagellar M-ring protein fliF; TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein, Flagellar M-ring domain protein YP_008523547.1 KEGG: fliG, flagellar motor switch protein G; TIGRFAM: flagellar motor switch protein FliG; PFAM: Flagellar motor switch protein FliG, C-terminal YP_008523548.1 PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE; KEGG: fliH, flagellar assembly protein fliH YP_008523549.1 TIGRFAM: flagellar protein export ATPase FliI, ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; KEGG: hypothetical protein; SMART: AAA ATPase YP_008523550.1 TIGRFAM: flagellar export protein FliJ; KEGG: flagellar export protein FliJ YP_008523551.1 PFAM: Flagellar hook-length control protein-like protein; KEGG: flagellar hook-length control protein YP_008523552.1 PFAM: flagellar basal body-associated protein FliL; KEGG: flagellar basal body-associated protein FliL YP_008523553.1 KEGG: flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM, surface presentation of antigens (SPOA) protein YP_008523554.1 KEGG: flagellar motor switch protein FliN; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein YP_008523555.1 KEGG: fliO, flagellar protein; TIGRFAM: flagellar biosynthetic protein FliO; PFAM: Flagellar biosynthesis protein, FliO YP_008523556.1 KEGG: flagellar biosynthetic protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein YP_008523557.1 KEGG: fliQ, flagellar biosynthesis protein FliQ; TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3 YP_008523558.1 KEGG: flagellar biosynthetic protein FliR; TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein YP_008523559.1 KEGG: flgL, flagellar hook-associated protein FlgL; TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein YP_008523560.1 KEGG: flagellar hook-associated protein FlgK; TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein, flagellar basal body rod protein YP_008523561.1 TIGRFAM: flagellar rod assembly protein/muramidase FlgJ; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase, Flagellar protein FlgJ; KEGG: flgJ, flagellum-specific muramidase; SMART: Lysozyme subfamily 2 YP_008523562.1 KEGG: flgI, flagellar P-ring protein flgI; HAMAP : Flagellar P-ring protein; PFAM: flagellar P-ring protein YP_008523563.1 KEGG: flgH, flagellar basal body L-ring protein; HAMAP : Flagellar L-ring protein; PFAM: flagellar L-ring protein YP_008523564.1 KEGG: flgG, flagellar basal-body rod protein flgG; TIGRFAM: flagellar basal-body rod protein FlgG, flagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein, flagellar basal body rod protein YP_008523565.1 KEGG: flagellar basal-body rod protein FlgF; TIGRFAM: flagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein, flagellar basal body rod protein YP_008523566.1 KEGG: fagellar hook-basal body protein; TIGRFAM: flagellar hook-basal body protein; PFAM: flagellar basal body FlaE domain protein, protein of unknown function DUF1078 domain protein, flagellar basal body rod protein YP_008523567.1 PFAM: flagellar hook capping protein, FlgD Ig-like domain, FlgD Tudor-like domain; KEGG: flgD, flagellar basal body rod modification protein YP_008523568.1 KEGG: flgC, flagellar basal body rod protein FlgC; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein, flagellar basal body rod protein YP_008523569.1 KEGG: flgB, flagellar basal-body rod protein flgB; TIGRFAM: flagellar basal-body rod protein FlgB; PFAM: flagellar basal body rod protein YP_008523570.1 TIGRFAM: flagella basal body P-ring formation protein FlgA; PFAM: SAF domain protein; KEGG: flgA, flagellar basal-body P-ring formation protein flgA; SMART: SAF domain protein YP_008523571.1 KEGG: flgM, Negative regulator of flagellin synthesis flgM; TIGRFAM: flagellar biosynthesis anti-sigma factor protein FlgM; PFAM: Anti-sigma-28 factor FlgM family protein YP_008523572.1 PFAM: FlgN family protein; KEGG: FlgN family protein YP_008523573.1 PFAM: flagellar FlhE family protein; KEGG: flagellar FlhE family protein YP_008523574.1 KEGG: flhA, flagellar biosynthesis protein FlhA; TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein YP_008523575.1 KEGG: flhB, flagellar biosynthesis protein FlhB; TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter YP_008523576.1 PFAM: Chemotaxis phosphatase CheZ; KEGG: cheZ, chemotaxis response - phosphatase cheZ YP_008523577.1 KEGG: cheY, chemotaxis regulatory protein CheY; PFAM: response regulator receiver; SMART: response regulator receiver YP_008523578.1 SMART: response regulator receiver; HAMAP : Chemotaxis response regulator protein-glutamate methylesterase; KEGG: cheB, chemotaxis response regulator protein-glutamate methylesterase cheB; PFAM: CheB methylesterase, response regulator receiver YP_008523579.1 PFAM: MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal, MCP methyltransferase, CheR-type, all-alpha domain, N-terminal; KEGG: chemotaxis protein CheR; SMART: MCP methyltransferase CheR-type YP_008523580.1 KEGG: methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer, ligand binding Tar domain protein, histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer, histidine kinase HAMP region domain protein, ligand binding Tar domain protein YP_008523581.1 KEGG: cheW, Positive regulator of CheA protein activity (CheW); PFAM: CheW domain protein; SMART: CheW domain protein YP_008523582.1 KEGG: chemotaxis protein CheA; PFAM: CheW domain protein, CheY binding protein, Hpt domain protein, Signal transducing histidine kinase homodimeric, ATP-binding region ATPase domain protein; SMART: CheW domain protein, ATP-binding region ATPase domain protein, Hpt domain protein YP_008523583.1 PFAM: Motility protein B, N-terminal domain, OmpA/MotB domain protein; KEGG: motB, flagellar motor rotation protein motB YP_008523584.1 KEGG: flagellar motor protein MotA; TIGRFAM: flagellar motor stator protein MotA; PFAM: MotA/TolQ/ExbB proton channel YP_008523585.1 KEGG: flhC, flagellar transcriptional activator flhC; HAMAP : flagellar transcriptional activator FlhC; PFAM: flagellar transcriptional activator FlhC YP_008523586.1 KEGG: transcriptional activator FlhD; HAMAP : Transcriptional activator FlhD; PFAM: flagellar transcriptional activator YP_008523587.1 KEGG: methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer, ligand binding Tar domain protein, histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer, histidine kinase HAMP region domain protein YP_008523588.1 PFAM: Dextransucrase DSRB; KEGG: hypothetical protein YP_008523589.1 KEGG: yeeO, inner membrane protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE YP_008523590.1 PFAM: cytochrome b562; KEGG: cytochrome b562 YP_008523591.1 TIGRFAM: aconitate hydratase 2; KEGG: acnB, aconitate hydratase 2 (citrate hydro-lyase 2) (aconitase 2); PFAM: Aconitase B, Aconitase B, HEAT-like protein, aconitate hydratase domain-containing protein YP_008523592.1 PFAM: triphosphoribosyl-dephospho-CoA protein; TIGRFAM: triphosphoribosyl-dephospho-CoA synthase CitG; HAMAP : 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase; KEGG: citG, triphosphoribosyl-dephospho-CoA synthase YP_008523593.1 TIGRFAM: holo-ACP synthase CitX; KEGG: holo-ACP synthase CitX; PFAM: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase YP_008523594.1 TIGRFAM: citrate lyase, alpha subunit; KEGG: citrate lyase subunit alpha; PFAM: Citrate lyase alpha subunit YP_008523595.1 TIGRFAM: citrate lyase, beta subunit; KEGG: citrate lyase subunit beta; PFAM: HpcH/HpaI aldolase YP_008523596.1 TIGRFAM: citrate lyase acyl carrier protein; HAMAP : Citrate lyase acyl carrier protein; KEGG: citrate lyase acyl carrier protein; PFAM: Malonate decarboxylase/citrate lyase acyl carrier protein YP_008523597.1 SMART: Citrate lyase ligase domain protein; TIGRFAM: citrate lyase ligase, cytidyltransferase-related domain protein; KEGG: citrate lyase ligase; PFAM: Citrate lyase ligase domain protein, GCN5-related N-acetyltransferase YP_008523598.1 KEGG: hypothetical protein; PFAM: fumarylacetoacetate (FAA) hydrolase YP_008523599.1 PFAM: major facilitator superfamily MFS_1; KEGG: permease YP_008523600.1 PFAM: PrpF protein; KEGG: hypothetical protein YP_008523601.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: LysR family transcriptional regulator YbhD YP_008523602.1 KEGG: transposase YP_008523603.1 KEGG: dethiobiotin synthase; TIGRFAM: dethiobiotin synthase; HAMAP : Dethiobiotin synthetase YP_008523604.1 TIGRFAM: biotin biosynthesis protein BioC; HAMAP : biotin biosynthesis protein BioC; KEGG: biotin biosynthesis protein BioC; PFAM: Methyltransferase type 11 YP_008523605.1 PFAM: aminotransferase class I and II; TIGRFAM: 8-amino-7-oxononanoate synthase; HAMAP : 8-amino-7-oxononanoate synthase; KEGG: 8-amino-7-oxononanoate synthase YP_008523606.1 KEGG: biotin synthase; PFAM: biotin and thiamin synthesis associated protein, Radical SAM domain protein; TIGRFAM: biotin synthase; HAMAP : Biotin synthase; SMART: biotin and thiamin synthesis associated protein, Elongator protein 3/MiaB/NifB YP_008523607.1 PFAM: aminotransferase class-III; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; HAMAP : adenosylmethionine--8-amino-7-oxononanoate aminotransferase; KEGG: bioA, adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_008523608.1 KEGG: glycoside hydrolase family 3 domain-containing protein; PFAM: glycoside hydrolase family 3 domain protein YP_008523609.1 KEGG: LrgA family protein; HAMAP : UPF0299 membrane protein yohJ; PFAM: LrgA family protein YP_008523610.1 KEGG: LrgB family protein; TIGRFAM: Conserved hypothetical protein CHP00659; PFAM: LrgB family protein YP_008523611.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding domain protein, CMP/dCMP deaminase zinc-binding protein; TIGRFAM: cytidine deaminase; HAMAP : Cytidine deaminase; KEGG: cytidine deaminase YP_008523612.1 SMART: malic protein NAD-binding protein; HAMAP : NAD-dependent malic enzyme; KEGG: malate dehydrogenase; PFAM: malic protein NAD-binding protein, malic protein domain protein YP_008523613.1 KEGG: binding-protein-dependent transporter inner membrane component YP_008523614.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: MoeA domain protein domain I and II, molybdopterin binding domain-containing protein, MoeA domain protein domain IV; KEGG: molybdopterin biosynthesis protein MoeA; SMART: molybdopterin binding domain-containing protein YP_008523615.1 KEGG: moeB, molybdopterin synthase sulfurylase; TIGRFAM: molybdopterin synthase sulfurylase MoeB; PFAM: UBA/THIF-type NAD/FAD binding protein, MoeZ/MoeB domain protein YP_008523616.1 PFAM: thioesterase superfamily protein; KEGG: thioesterase superfamily protein YP_008523617.1 PFAM: nitroreductase; KEGG: hypothetical protein YP_008523618.1 PFAM: NADPH-dependent FMN reductase; KEGG: flavodoxin/nitric oxide synthase YP_008523619.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: diguanylate cyclase; SMART: GGDEF domain containing protein YP_008523620.1 KEGG: hypothetical protein; HAMAP : Protein mtfA; PFAM: protein of unknown function DUF980 YP_008523621.1 PFAM: ABC transporter related protein; KEGG: ABC transporter-like protein; SMART: AAA ATPase YP_008523622.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; KEGG: HAD-superfamily hydrolase YP_008523623.1 PFAM: PHP domain protein; KEGG: hypothetical protein YP_008523624.1 KEGG: solute binding protein YP_008523625.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transport systems inner membrane component YP_008523626.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: carbohydrate ABC transporter membrane protein 1, CUT1 family YP_008523627.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: transcriptional regulator YP_008523628.1 PFAM: Desulfoferrodoxin ferrous iron-binding region; KEGG: desulfoferrodoxin ferrous iron-binding region YP_008523629.1 KEGG: acyl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase domain-containing protein YP_008523630.1 KEGG: acyl-CoA dehydrogenase domain-containing protein; PFAM: acyl-CoA dehydrogenase domain-containing protein YP_008523631.1 PFAM: major facilitator superfamily MFS_1; KEGG: major facilitator superfamily protein YP_008523632.1 KEGG: AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC domain-containing protein, AraC protein arabinose-binding/dimerization; SMART: Helix-turn-helix, AraC domain-containing protein YP_008523633.1 KEGG: short chain acyl-CoA synthetase; PFAM: AMP-dependent synthetase and ligase, Domain of unknown function DUF4009 YP_008523634.1 KEGG: ferredoxin-like protein YP_008523635.1 PFAM: FAD dependent oxidoreductase; KEGG: electron-transferring-flavoprotein dehydrogenase YP_008523636.1 KEGG: electron transfer flavoprotein subunit YdiR; PFAM: Electron transfer flavoprotein alpha subunit , Electron transfer flavoprotein alpha/beta-subunit; SMART: Electron transfer flavoprotein alpha/beta-subunit YP_008523637.1 KEGG: Electron transfer flavoprotein alpha/beta-subunit; PFAM: Electron transfer flavoprotein alpha/beta-subunit; SMART: Electron transfer flavoprotein alpha/beta-subunit YP_008523638.1 KEGG: hypothetical protein YP_008523639.1 KEGG: AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC domain-containing protein, Cupin 2 conserved barrel domain protein; SMART: Helix-turn-helix, AraC domain-containing protein YP_008523640.1 KEGG: acyl-CoA dehydrogenase domain-containing protein; PFAM: acyl-CoA dehydrogenase domain-containing protein YP_008523641.1 KEGG: coenzyme A transferase; PFAM: coenzyme A transferase; SMART: coenzyme A transferase YP_008523642.1 PFAM: dehydroquinase class I; TIGRFAM: 3-dehydroquinate dehydratase, type I; HAMAP : 3-dehydroquinate dehydratase; KEGG: aroD, 3-dehydroquinate dehydratase YP_008523643.1 HAMAP : Shikimate dehydrogenase, Quinate/shikimate dehydrogenase; KEGG: Shikimate dehydrogenase substrate-binding domain-containing protein; PFAM: Shikimate dehydrogenase substrate binding domain protein, Shikimate/quinate 5-dehydrogenase YP_008523644.1 PFAM: major facilitator superfamily MFS_1; KEGG: major facilitator superfamily protein YP_008523645.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: LysR family transcriptional regulator YP_008523646.1 PFAM: major facilitator superfamily MFS_1; KEGG: major facilitator superfamily protein YP_008523647.1 HAMAP : Shikimate kinase; KEGG: shikimate kinase; PFAM: shikimate kinase YP_008523648.1 PFAM: Domain of unknown function DUF1870; KEGG: hypothetical protein YP_008523649.1 KEGG: AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC domain-containing protein, AraC protein arabinose-binding/dimerization; SMART: Helix-turn-helix, AraC domain-containing protein YP_008523650.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: hypothetical protein YP_008523651.1 KEGG: iron-sulfur cluster binding protein; TIGRFAM: iron-sulfur cluster binding protein; PFAM: Lactate utilization protein B/C, 4Fe-4S ferredoxin, iron-sulpur binding domain-containing protein, 4Fe-4S binding protein, C-terminal YP_008523652.1 PFAM: Lactate utilization protein B/C; KEGG: hypothetical protein YP_008523654.1 KEGG: universal stress protein A YP_008523655.1 PFAM: Enolase domain-containing protein; TIGRFAM: enolase; HAMAP : Enolase; KEGG: hypothetical protein YP_008523656.1 KEGG: putative cyclic beta 1-2 glucan synthetase; PFAM: Protein of unknown function DUF2329, glycosyltransferase 36, carbohydrate binding protein, glycosyltransferase 36 associated protein; SMART: carbohydrate binding protein YP_008523657.1 KEGG: LacI family transcriptional regulator; PFAM: regulatory protein LacI; SMART: regulatory protein LacI YP_008523658.1 KEGG: maltoporin; HAMAP : Maltoporin; PFAM: porin LamB type YP_008523659.1 KEGG: phosphotransferase system EIIB/cysteine, phosphorylation site; TIGRFAM: PTS system, glucose-like IIB subunint; PFAM: Phosphotransferase system EIIB/cysteine, phosphorylation site YP_008523660.1 KEGG: beta-galactosidase; PFAM: Glycoside hydrolase family 42 domain protein, Beta-galactosidase trimerisation domain protein, Beta-galactosidase domain protein YP_008523661.1 KEGG: arabinogalactan endo-1,4-beta-galactosidase; PFAM: glycosyl hydrolase 53 domain protein YP_008523662.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: ABC transporter YP_008523663.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: ABC transporter YP_008523664.1 KEGG: extracellular solute-binding protein YP_008523665.1 PFAM: ABC transporter related protein, TOBE domain-containing protein; KEGG: Glycerol-3-phosphate-transporting ATPase; SMART: AAA ATPase YP_008523666.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein, response regulator receiver; KEGG: response regulator receiver modulated diguanylate cyclase; SMART: GGDEF domain containing protein, response regulator receiver YP_008523667.1 TIGRFAM: PAS sensor protein; PFAM: CHASE domain protein, ATP-binding region ATPase domain protein, response regulator receiver, PAS fold-3 domain protein, Hpt domain protein, histidine kinase A domain protein; KEGG: multi-sensor hybrid histidine kinase; SMART: CHASE domain protein, ATP-binding region ATPase domain protein, response regulator receiver, Hpt domain protein, PAC repeat-containing protein, histidine kinase A domain protein, PAS domain containing protein YP_008523668.1 TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding protein, Ada metal-binding domain-containing protein, Helix-turn-helix, AraC domain-containing protein, methylguanine DNA methyltransferase ribonuclease domain protein; KEGG: ada, bifunctional transcriptional regulator of DNA repair (AraC/Xyl family)/O6-methylguanine-DNA methyltransferase; SMART: Helix-turn-helix, AraC domain-containing protein YP_008523669.1 KEGG: base excision DNA repair protein; PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein YP_008523670.1 KEGG: GntR family transcriptional regulator; PFAM: aminotransferase class I and II, regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_008523671.1 PFAM: protein of unknown function DUF81; KEGG: hypothetical protein YP_008523672.1 PFAM: GCN5-related N-acetyltransferase; KEGG: GCN5-like N-acetyltransferase YP_008523673.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: paaC, protein PaaC YP_008523674.1 KEGG: bglH, beta-glucosidase; PFAM: glycoside hydrolase family 1 YP_008523675.1 TIGRFAM: PTS system, beta-glucoside-specific IIABC subunit, PTS system, glucose subfamily, IIA subunit; KEGG: arbF, PTS system beta-glucoside-specific IIABC component; PFAM: sugar-specific permease EIIA 1 domain-containing protein, phosphotransferase system EIIC, Phosphotransferase system EIIB/cysteine, phosphorylation site YP_008523676.1 KEGG: beta-glucoside operon antiterminator; PFAM: PRD domain protein, CAT RNA-binding domain protein; SMART: CAT RNA-binding domain protein YP_008523677.1 TIGRFAM: AMP nucleosidase; KEGG: AMP nucleosidase; PFAM: AMP nucleoside phosphorylase domain-containing protein, purine or other phosphorylase family 1 YP_008523678.1 PFAM: ABC-type transporter, periplasmic subunit; KEGG: cbuB, ferric chrysobactin binding protein,permease periplasmic protein YP_008523679.1 PFAM: protein of unknown function DUF894 DitE; KEGG: enterobactin exporter EntS YP_008523680.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: transporter permease YP_008523681.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: fepG, ferric enterobactin ABC transporter YP_008523682.1 PFAM: ABC transporter related protein; KEGG: cbuC, ferrichrysobactin transporter, permease, ATPase; SMART: AAA ATPase YP_008523683.1 SMART: Polyketide synthase, thioesterase domain-containing protein; TIGRFAM: amino acid adenylation domain protein, non-ribosomal peptide synthase; KEGG: chrysobactin synthetase cbsF; PFAM: AMP-dependent synthetase and ligase, condensation domain protein, acyl carrier protein familyprotein, Thioesterase YP_008523684.1 KEGG: MbtH domain-containing protein; PFAM: MbtH domain protein; SMART: MbtH domain protein YP_008523685.1 PFAM: Enterochelin esterase domain-containing protein, esterase; KEGG: enterobactin/ferric enterobactin esterase YP_008523686.1 KEGG: TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, TonB-dependent receptor plug YP_008523687.1 TIGRFAM: isochorismate synthase; KEGG: isochorismate synthase; PFAM: Chorismate binding domain-containing protein YP_008523688.1 TIGRFAM: 2,3-dihydroxybenzoate-AMP ligase; KEGG: entE, enterobactin synthase subunit E; PFAM: AMP-dependent synthetase and ligase YP_008523689.1 KEGG: isochorismatase; PFAM: isochorismatase hydrolase, acyl carrier protein familyprotein YP_008523690.1 KEGG: 2,3-dihydroxybenzoate-2,3-dehydrogenase; SMART: Polyketide synthase/Fatty acid synthase, KR YP_008523692.1 PFAM: glycosyl transferase family 28, Glycosyltransferase 28 domain-containing protein; KEGG: glycosyl transferase family protein YP_008523693.1 TIGRFAM: gamma-glutamyltransferase; KEGG: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase YP_008523694.1 KEGG: DNA gyrase inhibitor; PFAM: transcription activator effector binding protein; SMART: transcription activator effector binding protein YP_008523695.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: LysR family transcriptional regulator YP_008523696.1 KEGG: aminotransferase; PFAM: aminotransferase class I and II YP_008523697.1 KEGG: family 3 extracellular solute-binding protein; PFAM: ABC-type transporter, periplasmic subunit family 3; SMART: ABC-type transporter, periplasmic subunit family 3 YP_008523698.1 KEGG: RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_008523699.1 KEGG: hydrophobe/amphiphile efflux-1 (HAE1) family transporter; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein YP_008523700.1 KEGG: RND efflux membrane fusion protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_008523701.1 PFAM: regulatory protein TetR; KEGG: TetR family transcriptional regulator YP_008523702.1 KEGG: membrane transport protein; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1 YP_008523703.1 KEGG: D-allose kinase; PFAM: ROK family protein YP_008523704.1 KEGG: yjcU, D-allulose-6-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase YP_008523705.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: alsC, D-allose transport system permease protein AlsC YP_008523706.1 PFAM: ABC transporter related protein; KEGG: D-allose ABC transporter; SMART: AAA ATPase YP_008523707.1 PFAM: Periplasmic binding protein domain; KEGG: D-allose transporter subunit YP_008523708.1 PFAM: sugar isomerase (SIS), helix-turn-helix protein RpiR; KEGG: transcriptional regulator of D-allose utilization YP_008523709.1 TIGRFAM: ribose 5-phosphate isomerase B, sugar-phosphate isomerase, RpiB/LacA/LacB family; KEGG: RpiB/LacA/LacB family sugar-phosphate isomerase; PFAM: Ribose/galactose isomerase YP_008523710.1 TIGRFAM: formate dehydrogenase accessory protein FdhE; HAMAP : Protein fdhE; KEGG: formate dehydrogenase accessory protein FdhE; PFAM: formate dehydrogenase accessory protein YP_008523711.1 KEGG: formate dehydrogenase subunit gamma; TIGRFAM: formate dehydrogenase, gamma subunit; PFAM: Di-heme cytochrome, transmembrane YP_008523712.1 KEGG: formate dehydrogenase subunit beta; TIGRFAM: formate dehydrogenase, beta subunit; PFAM: 4Fe-4S ferredoxin, iron-sulpur binding domain-containing protein, Formate dehydrogenase transmembrane domain protein, 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_008523713.1 SMART: molybdopterin oxidoreductase Fe4S4 region; TIGRFAM: formate dehydrogenase, alpha subunit; KEGG: formate dehydrogenase subunit alpha; PFAM: molybdopterin oxidoreductase, molybdopterin oxidoreductase Fe4S4 region, molybdopterin dinucleotide-binding region YP_008523714.1 PFAM: Protein of unknown function DUF2002; KEGG: hypothetical protein YP_008523715.1 KEGG: glucose-1-phosphatase; PFAM: histidine acid phosphatase YP_008523716.1 PFAM: Extracytoplasmic function sigma factor YlaC; KEGG: extracytoplasmic function sigma factor YlaC YP_008523717.1 KEGG: (NiFe) hydrogenase maturation protein HypF; TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: SUA5/yciO/yrdC domain-containing protein, acylphosphatase YP_008523718.1 KEGG: hydrogenase expression/formation protein HypE; TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein domain protein, AIR synthase related protein YP_008523719.1 KEGG: hydrogenase expression/formation protein HypD; TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein YP_008523720.1 KEGG: hydrogenase assembly chaperone HypC/HupF; TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC) YP_008523721.1 KEGG: hydrogenase isoenzymes nickel incorporation protein; TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K YP_008523722.1 TIGRFAM: hydrogenase nickel insertion protein HypA; HAMAP : hydrogenase nickel incorporation protein hypA; KEGG: hybF, hydrogenases 1 and 2 maturation protein; PFAM: hydrogenase expression/synthesis HypA YP_008523723.1 KEGG: hydrogenase 2-specific chaperone; TIGRFAM: [NiFe]-hydrogenase assembly, chaperone, HybE; PFAM: [NiFe]-hydrogenase assembly, chaperone, HybE YP_008523724.1 KEGG: hydrogenase expression/formation protein; TIGRFAM: hydrogenase expression/formation protein, hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein YP_008523725.1 KEGG: nickel-dependent hydrogenase large subunit; PFAM: nickel-dependent hydrogenase large subunit YP_008523726.1 KEGG: putative hydrogenase 2 b cytochrome subunit YP_008523727.1 PFAM: 4Fe-4S ferredoxin, iron-sulpur binding domain-containing protein; KEGG: hydrogenase 2 protein HybA YP_008523728.1 TIGRFAM: hydrogenase (NiFe) small subunit HydA; KEGG: hydrogenase 2 small subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit YP_008523729.1 KEGG: ABC transporter-like protein; PFAM: ABC transporter related protein; SMART: AAA ATPase YP_008523730.1 KEGG: phenazine biosynthesis protein PhzF family; TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein YP_008523731.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: ngrA, 4'-phosphopantetheinyl transferase YP_008523732.1 KEGG: 3-hydroxyacyl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein, 3-hydroxyacyl-CoA dehydrogenase domain-containing protein YP_008523733.1 TIGRFAM: Conserved hypothetical protein CHP02466; KEGG: hypothetical protein YP_008523734.1 PFAM: 2OG-Fe(II) oxygenase YP_008523735.1 PFAM: AMP-dependent synthetase and ligase, KR domain protein, Beta-ketoacyl synthase , Acyl transferase, Domain of unknown function DUF4009, acyl carrier protein familyprotein; KEGG: beta-ketoacyl synthase; SMART: Polyketide synthase, beta-ketoacyl synthase region-containing protein, Polyketide synthase, acyl transferase domain-containing protein, Polyketide synthase/Fatty acid synthase, KR, Polyketide synthase, phosphopantetheine-binding protein YP_008523736.1 PFAM: acyl carrier protein familyprotein; KEGG: phosphopantetheine-containing protein YP_008523737.1 KEGG: hypothetical protein YP_008523738.1 KEGG: hypothetical protein YP_008523739.1 KEGG: NHL repeat containing protein YP_008523740.1 PFAM: pentapeptide repeat protein; KEGG: pentapeptide repeat-containing protein YP_008523743.1 KEGG: PE_PGRS23, hypothetical protein YP_008523744.1 KEGG: FkbH-like protein; TIGRFAM: FkbH like protein, HAD-superfamily phosphatase, subfamily IIIC; PFAM: GCN5-related N-acetyltransferase YP_008523745.1 KEGG: acyl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase domain-containing protein YP_008523747.1 PFAM: protein of unknown function DUF883 ElaB; KEGG: hypothetical protein YP_008523748.1 PFAM: Protein of unknown function DUF2892; KEGG: hypothetical protein YP_008523749.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; HAMAP : NAD(P)H-quinone oxidoreductase subunit 2; KEGG: proton-translocating NADH-quinone oxidoreductase subunit N YP_008523750.1 TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; KEGG: proton-translocating NADH-quinone oxidoreductase subunit M; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_008523751.1 TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; KEGG: NADH dehydrogenase subunit L; PFAM: NADH/Ubiquinone/plastoquinone (complex I), NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein YP_008523752.1 KEGG: NADH dehydrogenase subunit K; HAMAP : NAD(P)H-quinone oxidoreductase subunit 4L; PFAM: NADH-ubiquinone oxidoreductase chain 4L YP_008523753.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: NADH dehydrogenase (quinone) YP_008523754.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; TIGRFAM: NADH-quinone oxidoreductase, chain I; HAMAP : NAD(P)H-quinone oxidoreductase subunit I; KEGG: NADH dehydrogenase subunit I YP_008523755.1 HAMAP : NAD(P)H-quinone oxidoreductase subunit 1; KEGG: NADH dehydrogenase subunit H; PFAM: respiratory-chain NADH dehydrogenase subunit 1 YP_008523756.1 SMART: NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding protein, molybdopterin oxidoreductase Fe4S4 region; TIGRFAM: NADH-quinone oxidoreductase, chain G; KEGG: NADH dehydrogenase subunit G; PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding protein, molybdopterin oxidoreductase Fe4S4 region, molybdopterin oxidoreductase, molybdopterin dinucleotide-binding region YP_008523757.1 SMART: NADH ubiquinone oxidoreductase, F subunit, iron sulfur binding protein; TIGRFAM: NADH-quinone oxidoreductase, F subunit; KEGG: NADH-quinone oxidoreductase subunit F; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit, Soluble ligand binding domain-containing protein, NADH ubiquinone oxidoreductase, F subunit, iron sulfur binding protein YP_008523758.1 TIGRFAM: NADH-quinone oxidoreductase, E subunit; KEGG: NADH-quinone oxidoreductase subunit E; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit YP_008523759.1 TIGRFAM: NADH dehydrogenase I, D subunit, NADH dehydrogenase, subunit C; HAMAP : NAD(P)H-quinone oxidoreductase subunit H, NADH-quinone oxidoreductase subunit C/D; KEGG: NADH dehydrogenase I subunit D; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa, NADH dehydrogenase (ubiquinone) 30 kDa subunit YP_008523760.1 PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit; HAMAP : NAD(P)H-quinone oxidoreductase subunit K; KEGG: NADH dehydrogenase subunit B YP_008523761.1 KEGG: NADH dehydrogenase subunit A; HAMAP : NAD(P)H-quinone oxidoreductase subunit 3; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3 YP_008523762.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: LysR family transcriptional regulator YP_008523763.1 KEGG: class I/II aminotransferase; PFAM: aminotransferase class I and II YP_008523764.1 PFAM: metal-dependent phosphohydrolase HD sub domain-containing protein; KEGG: hypothetical protein; SMART: metal-dependent phosphohydrolase HD region YP_008523765.1 PFAM: Citrate transporter, TrkA-C domain protein; KEGG: yfbS, transporter YP_008523766.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; KEGG: putative phosphatase YP_008523767.1 KEGG: hypothetical protein; HAMAP : UPF0304 protein yfbU; PFAM: YfbU family protein YP_008523768.1 KEGG: hypothetical protein; HAMAP : UPF0208 membrane protein yfbV; PFAM: Uncharacterized protein family UPF0208 YP_008523769.1 PFAM: acetate and butyrate kinase; TIGRFAM: acetate kinase; HAMAP : Acetate kinase; KEGG: acetate kinase YP_008523770.1 TIGRFAM: phosphate acetyltransferase; KEGG: phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase, DRTGG domain protein YP_008523771.1 PFAM: NUDIX hydrolase; KEGG: NUDIX hydrolase YP_008523772.1 KEGG: phosphodiesterase; TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: Calcineurin-like phosphoesterase superfamily domain YP_008523773.1 KEGG: ethanolamine ammonia-lyase; PFAM: Ethanolamine ammonia-lyase light chain; overlaps another CDS with the same product name YP_008523774.1 KEGG: ethanolamine ammonia lyase large subunit; PFAM: Ethanolamine ammonia lyase large subunit; overlaps another CDS with the same product name YP_008523775.1 TIGRFAM: ethanolamine transporter; KEGG: ethanolamine transporter YP_008523776.1 PFAM: Glutathione S-transferase domain-containing protein; KEGG: glutathione S-transferase domain-containing protein YP_008523777.1 TIGRFAM: dihydroneopterin aldolase; PFAM: dihydroneopterin aldolase; KEGG: dihydroneopterin aldolase; SMART: dihydroneopterin aldolase YP_008523778.1 PFAM: NAD-dependent epimerase/dehydratase, domain of unknown function DUF1731; KEGG: hypothetical protein YP_008523779.1 PFAM: ABC transporter related protein; KEGG: hisP, histidine/lysine/arginine/ornithine ABC transporter ATP-binding protein; SMART: AAA ATPase YP_008523780.1 KEGG: polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: ABC-type transporter, integral membrane subunit YP_008523781.1 KEGG: polar amino acid ABC transporter permease; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: ABC-type transporter, integral membrane subunit YP_008523782.1 TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: ABC-type transporter, periplasmic subunit family 3; KEGG: cationic amino acid ABC transporter periplasmic binding protein; SMART: ABC-type transporter, periplasmic subunit family 3 YP_008523783.1 KEGG: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein YP_008523784.1 TIGRFAM: amidophosphoribosyltransferase; KEGG: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II, phosphoribosyltransferase YP_008523785.1 PFAM: Colicin V production protein; KEGG: colicin V production protein YP_008523786.1 PFAM: Sporulation domain-containing protein; KEGG: dedD, hypothetical protein YP_008523787.1 TIGRFAM: FolC bifunctional protein; KEGG: bifunctional folylpolyglutamate synthase/dihydrofolate synthase; PFAM: Mur ligase middle domain protein YP_008523788.1 PFAM: carboxyl transferase; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; HAMAP : Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; KEGG: acetyl-CoA carboxylase subunit beta YP_008523789.1 PFAM: SNARE associated protein; KEGG: dedA, hypothetical protein YP_008523790.1 TIGRFAM: tRNA pseudouridine synthase A; HAMAP : tRNA pseudouridine synthase A; KEGG: tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain-containing protein YP_008523791.1 PFAM: Semialdehyde dehydrogenase dimerization region, Semialdehyde dehydrogenase NAD - binding protein; KEGG: putative semialdehyde dehydrogenase; SMART: Semialdehyde dehydrogenase NAD - binding protein YP_008523792.1 HAMAP : Erythronate-4-phosphate dehydrogenase; KEGG: pdxB, erythronate-4-phosphate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein, D-isomer specific 2-hydroxyacid dehydrogenase catalytic region-containing protein, Erythronate-4-phosphate dehydrogenase, dimerization domain YP_008523793.1 KEGG: histidine kinase; PFAM: Two-component sensor kinase domain-containing protein, ATP-binding region ATPase domain protein, histidine kinase HAMP region domain protein, histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein, histidine kinase HAMP region domain protein YP_008523794.1 KEGG: winged helix family two component transcriptional regulator; PFAM: response regulator receiver, transcriptional regulator domain-containing protein; SMART: response regulator receiver, transcriptional regulator domain-containing protein YP_008523795.1 KEGG: transport of tricarboxylates YP_008523796.1 KEGG: hypothetical protein YP_008523797.1 PFAM: protein of unknown function DUF112 transmembrane; KEGG: hypothetical protein YP_008523798.1 KEGG: flk, flagella biosynthesis regulator YP_008523799.1 PFAM: Beta-ketoacyl synthase; KEGG: Beta-ketoacyl synthase; SMART: Polyketide synthase, beta-ketoacyl synthase region-containing protein YP_008523800.1 TIGRFAM: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC; HAMAP : tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmC; KEGG: 5-methylaminomethyl-2-thiouridine methyltransferase; PFAM: protein of unknown function DUF752, FAD dependent oxidoreductase YP_008523801.1 PFAM: YfcL protein; KEGG: hypothetical protein YP_008523802.1 PFAM: protein of unknown function DUF462; KEGG: transporting ATPase YP_008523803.1 PFAM: protein of unknown function DUF81; KEGG: hypothetical protein YP_008523804.1 PFAM: peptidase U6 penicillin-insensitive murein endopeptidase; KEGG: penicillin-insensitive murein endopeptidase YP_008523805.1 PFAM: chorismate synthase; TIGRFAM: chorismate synthase; HAMAP : Chorismate synthase; KEGG: chorismate synthase YP_008523806.1 PFAM: methyltransferase small; TIGRFAM: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific, modification methylase, HemK family; HAMAP : Ribosomal protein L3-specific, glutamine-N5-methyltransferase; KEGG: prmB, 50S ribosomal protein L3 N5-glutamine methyltransferase YP_008523807.1 HAMAP : UPF0115 protein yfcN; PFAM: Smr protein/MutS2; KEGG: hypothetical protein; SMART: Smr protein/MutS2 YP_008523808.1 TIGRFAM: phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase; KEGG: phosphohistidine phosphatase; SMART: Phosphoglycerate mutase YP_008523809.1 TIGRFAM: fatty acid oxidation complex, alpha subunit FadJ; KEGG: fatty oxidation complex subunit alpha; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein, Enoyl-CoA hydratase/isomerase, 3-hydroxyacyl-CoA dehydrogenase domain-containing protein YP_008523810.1 PFAM: Thiolase domain-containing protein; TIGRFAM: acetyl-CoA C-acyltransferase FadI, acetyl-CoA acetyltransferase; HAMAP : 3-ketoacyl-CoA thiolase; KEGG: fadI, 3-ketoacyl-CoA thiolase YP_008523811.1 KEGG: yfcZ, hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00743; PFAM: Conserved hypothetical protein CHP00743 YP_008523812.1 PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: long-chain fatty acid outer membrane transporter YP_008523813.1 PFAM: VacJ family lipoprotein; KEGG: VacJ family lipoprotein YP_008523814.1 PFAM: integrase family protein, Domain of unknown function DUF4102; KEGG: phage integrase family protein YP_008523816.1 KEGG: hypothetical protein YP_008523817.1 PFAM: transposase IS66, Transposase IS66, predicted helix-turn-helix domain; KEGG: hypothetical protein YP_008523818.1 PFAM: IS66 Orf2 family protein; KEGG: hypothetical protein YP_008523819.1 KEGG: hypothetical protein YP_008523820.1 PFAM: Domain of unknown function DUF4062; KEGG: hypothetical protein YP_008523822.1 KEGG: hypothetical protein YP_008523823.1 PFAM: Prophage CP4-57 regulatory; KEGG: hypothetical protein YP_008523824.1 KEGG: hypothetical protein YP_008523825.1 KEGG: hypothetical protein YP_008523827.1 TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_008523828.1 KEGG: 5'-nucleotidase; TIGRFAM: 5'-nucleotidase, lipoprotein e(P4) family; PFAM: acid phosphatase (Class B) YP_008523829.1 KEGG: ygfF, oxidoreductase domain containing protein; PFAM: short-chain dehydrogenase/reductase SDR YP_008523830.1 PFAM: protein of unknown function DUF1234; KEGG: hypothetical protein YP_008523831.1 KEGG: ATP-dependent RNA helicase DbpA; PFAM: DEAD/DEAH box helicase domain protein, helicase domain-containing protein, DbpA RNA-binding domain protein; SMART: DEAD-like helicase , helicase domain-containing protein YP_008523832.1 KEGG: molybdate ABC transporter periplasmic molybdate-binding protein YP_008523833.1 PFAM: ABC transporter related protein; KEGG: ABC transporter; SMART: AAA ATPase YP_008523834.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: transporter permease YP_008523835.1 PFAM: ABC-type transporter, periplasmic subunit; KEGG: periplasmic binding protein YP_008523837.1 KEGG: Prepilin peptidase; PFAM: peptidase A24A domain protein, peptidase A24A prepilin type IV YP_008523838.1 PFAM: General secretion pathway M protein; KEGG: general secretion pathway M protein YP_008523839.1 KEGG: outL, general secretion pathway protein L; TIGRFAM: general secretion pathway protein L; PFAM: GspL, cytoplasmic actin-ATPase-like domain, GspL periplasmic domain YP_008523840.1 KEGG: outK, general secretion pathway protein K YP_008523841.1 KEGG: general secretion pathway protein J; TIGRFAM: general secretion pathway protein J; PFAM: General secretion pathway protein J YP_008523842.1 KEGG: general secretion pathway protein I; TIGRFAM: general secretion pathway protein I; PFAM: type II secretion system protein I/J YP_008523843.1 TIGRFAM: general secretion pathway protein H; KEGG: general secretion pathway protein H YP_008523844.1 KEGG: outG, type II secretory pathway, component OutG; TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G YP_008523845.1 KEGG: general secretion pathway protein F; TIGRFAM: general secretion pathway protein F; PFAM: Type II secretion system F domain-containing protein YP_008523846.1 TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; KEGG: outE, general secretion pathway protein E; SMART: AAA ATPase YP_008523847.1 KEGG: outD, general secretion pathway protein D; TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein, NolW domain protein YP_008523848.1 TIGRFAM: general secretion pathway protein C; KEGG: general secretion pathway protein C YP_008523849.1 KEGG: general secretion pathway protein YP_008523850.1 KEGG: lipoprotein, PulS/OutS family; TIGRFAM: lipoprotein, PulS/OutS family; PFAM: Chaperone lipoprotein, PulS/OutS-like YP_008523851.1 KEGG: aminotransferase; PFAM: aminotransferase class I and II YP_008523852.1 PFAM: GCN5-related N-acetyltransferase; KEGG: hypothetical protein YP_008523853.1 PFAM: protein of unknown function DUF1611; KEGG: hypothetical protein YP_008523854.1 KEGG: mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing protein; SMART: Mandelate racemase/muconate lactonizing protein YP_008523855.1 KEGG: dat, D-alanine aminotransferase; PFAM: aminotransferase class IV YP_008523856.1 KEGG: peptidase M24 YP_008523857.1 PFAM: major facilitator superfamily MFS_1; KEGG: major facilitator superfamily protein YP_008523858.1 KEGG: hypothetical protein YP_008523859.1 KEGG: hypothetical protein YP_008523860.1 PFAM: Sulphatase-modifying factor protein; KEGG: hypothetical protein YP_008523861.1 PFAM: ferredoxin; KEGG: ferredoxin YP_008523862.1 PFAM: Proline dehydrogenase; KEGG: Proline dehydrogenase YP_008523863.1 PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: Taurine catabolism dioxygenase TauD/TfdA YP_008523864.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: cpmB, carbapenem biosynthesis protein CpmB YP_008523865.1 PFAM: Domain of unknown function DUF1933, asparagine synthase; KEGG: asparagine synthase YP_008523866.1 KEGG: yenR, quorum-sensing transcriptional activator; PFAM: Autoinducer-binding domain protein, regulatory protein LuxR; SMART: regulatory protein LuxR YP_008523867.1 PFAM: GCN5-related N-acetyltransferase; KEGG: IAA acetyltransferase YP_008523868.1 KEGG: NAD-dependent aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_008523870.1 PFAM: protein of unknown function DUF218; KEGG: DUF218 domain protein YP_008523871.1 PFAM: major facilitator superfamily MFS_1; KEGG: sugar phosphate permease YP_008523872.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: transcriptional regulator YP_008523873.1 TIGRFAM: parallel beta-helix repeat containing protein; PFAM: periplasmic copper-binding protein YP_008523874.1 TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase, exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: UDP-phosphate glucose phosphotransferase; PFAM: sugar transferase YP_008523875.1 KEGG: manB, phosphomannomutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I, phosphoglucomutase/phosphomannomutase , phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II, phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III YP_008523876.1 TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: cpsB, mannose-1-phosphate guanyltransferase; PFAM: Nucleotidyl transferase, mannose-6-phosphate isomerase type II YP_008523877.1 PFAM: glycosyl transferase group 1; KEGG: wcaI, colanic acid biosynthesis glycosyl transferase YP_008523878.1 KEGG: GDP-fucose synthetase; PFAM: NAD-dependent epimerase/dehydratase YP_008523879.1 TIGRFAM: GDP-mannose 4,6-dehydratase; KEGG: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase YP_008523880.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: transferase YP_008523881.1 PFAM: glycosyl transferase group 1; KEGG: putative Glycosyl transferase, group 1 YP_008523882.1 PFAM: glycosyl transferase group 1; KEGG: glycosyl transferase, group 1 YP_008523884.1 PFAM: glycosyl transferase family 11; KEGG: hypothetical protein YP_008523885.1 PFAM: polysaccharide biosynthesis protein; KEGG: membrane protein YP_008523886.1 TIGRFAM: capsular exopolysaccharide family; KEGG: tyrosine kinase; PFAM: lipopolysaccharide biosynthesis protein, AAA domain YP_008523887.1 KEGG: protein-tyrosine-phosphatase; PFAM: Phosphotyrosine protein phosphatase I superfamily; SMART: Phosphotyrosine protein phosphatase I superfamily YP_008523888.1 PFAM: polysaccharide export protein, Soluble ligand binding domain-containing protein; KEGG: wza, capsule polysaccharide export protein YP_008523889.1 PFAM: EAL domain-containing protein; KEGG: diguanylate phosphodiesterase YP_008523890.1 KEGG: response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR YP_008523891.1 KEGG: Citrate synthase (si); TIGRFAM: citrate synthase I; PFAM: Citrate synthase YP_008523892.1 PFAM: sugar-binding domain-containing protein, Sigma-70 region 4 type 2; KEGG: transcriptional regulator with sigma factor-related N-terminal domain YP_008523893.1 PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase YP_008523894.1 KEGG: glucokinase YP_008523895.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN YP_008523896.1 PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: PTS system lactose/cellobiose-specific transporter subunit IIB YP_008523897.1 PFAM: PTS system Galactitol-specific IIC component; KEGG: PTS system, mannitol-specific EIIC component YP_008523898.1 KEGG: hypothetical protein YP_008523899.1 KEGG: hypothetical protein YP_008523900.1 PFAM: protein of unknown function DUF894 DitE; KEGG: major facilitator superfamily protein YP_008523901.1 TIGRFAM: amidohydrolase; KEGG: amidohydrolase; PFAM: peptidase M20, peptidase dimerization domain protein YP_008523902.1 KEGG: iron-containing alcohol dehydrogenase; PFAM: iron-containing alcohol dehydrogenase YP_008523903.1 PFAM: ABC transporter related protein; KEGG: ABC transporter; SMART: AAA ATPase YP_008523904.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transporter inner membrane component YP_008523905.1 KEGG: glycine/betaine ABC transporter substrate-binding protein YP_008523906.1 KEGG: GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated domain-containing protein; SMART: UbiC transcription regulator-associated domain-containing protein YP_008523907.1 KEGG: histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase YP_008523908.1 PFAM: ABC transporter related protein; KEGG: histidine ABC transporter ATP-binding protein; SMART: AAA ATPase YP_008523909.1 KEGG: Octopine transport system permease occM; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: ABC-type transporter, integral membrane subunit YP_008523910.1 KEGG: Octopine transport system permease occQ; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: ABC-type transporter, integral membrane subunit YP_008523911.1 KEGG: family 3 extracellular solute-binding protein; PFAM: ABC-type transporter, periplasmic subunit family 3; SMART: ABC-type transporter, periplasmic subunit family 3 YP_008523912.1 PFAM: HutD-family protein; KEGG: hypothetical protein YP_008523913.1 KEGG: N-formimino-L-glutamate deiminase; TIGRFAM: formiminoglutamate deiminase; PFAM: amidohydrolase YP_008523914.1 TIGRFAM: imidazolonepropionase; HAMAP : Imidazolonepropionase; KEGG: imidazolonepropionase YP_008523915.1 KEGG: N-formylglutamate amidohydrolase; TIGRFAM: N-formylglutamate amidohydrolase; PFAM: N-formylglutamate amidohydrolase YP_008523916.1 HAMAP : Bifunctional protein folD; KEGG: folD, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain-containing protein, Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain-containing protein YP_008523917.1 KEGG: hypothetical protein YP_008523918.1 KEGG: cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase/mycothiol ligase, Cysteinyl-tRNA synthetase class Ia DALR; TIGRFAM: cysteinyl-tRNA synthetase; HAMAP : Cysteinyl-tRNA synthetase; SMART: Cysteinyl-tRNA synthetase class Ia DALR YP_008523919.1 PFAM: DoxX family protein; KEGG: DoxX family protein YP_008523920.1 KEGG: cyclophilin type peptidyl-prolyl cis-trans isomerase; PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type YP_008523921.1 TIGRFAM: UDP-2,3-diacylglucosamine hydrolase; HAMAP : UDP-2,3-diacylglucosamine hydrolase; KEGG: UDP-2,3-diacylglucosamine hydrolase; PFAM: metallophosphoesterase YP_008523922.1 SMART: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; KEGG: purE, N5-carboxyaminoimidazole ribonucleotide mutase; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase YP_008523923.1 TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase subunit; KEGG: phosphoribosylaminoimidazole carboxylase ATPase subunit; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp YP_008523924.1 KEGG: serine transporter; TIGRFAM: serine transporter; PFAM: Tryptophan/tyrosine permease YP_008523925.1 TIGRFAM: L-serine dehydratase 1; KEGG: L-serine dehydratase; PFAM: serine dehydratase alpha chain, serine dehydratase beta chain YP_008523927.1 PFAM: helix-turn-helix domain protein; KEGG: transcriptional regulator YP_008523928.1 PFAM: Polyphosphate kinase C-terminal domain, Polyphosphate kinase N-terminal domain, Polyphosphate kinase middle domain; TIGRFAM: polyphosphate kinase 1; HAMAP : Polyphosphate kinase; KEGG: polyphosphate kinase YP_008523929.1 TIGRFAM: exopolyphosphatase; KEGG: exopolyphosphatase; PFAM: Ppx/GppA phosphatase YP_008523930.1 PFAM: Protein of unknown function DUF2633; KEGG: hypothetical protein YP_008523931.1 TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family; KEGG: hypothetical protein YP_008523932.1 PFAM: UspA domain-containing protein; KEGG: UspA domain-containing protein YP_008523933.1 PFAM: Uncharacterized protein family YneG; KEGG: putative cytoplasmic protein YP_008523934.1 PFAM: isochorismatase hydrolase; KEGG: isochorismatase hydrolase YP_008523935.1 PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: peptidase C14 caspase catalytic subunit p20 YP_008523936.1 KEGG: V8-like Glu-specific endopeptidase YP_008523937.1 PFAM: protein of unknown function UPF0005; KEGG: yccA, carrier/transport protein YP_008523938.1 KEGG: TusE/DsrC/DsvC family sulfur relay protein; TIGRFAM: sulfur relay protein, TusE/DsrC/DsvC family; PFAM: DsrC family protein YP_008523939.1 KEGG: acylphosphatase; HAMAP : Acylphosphatase; PFAM: acylphosphatase YP_008523940.1 TIGRFAM: hemimethylated DNA binding protein; PFAM: Hemimethylated DNA-binding region; KEGG: hemimethylated DNA-binding protein; SMART: Hemimethylated DNA-binding region YP_008523941.1 KEGG: CoA-binding domain-containing protein; PFAM: CoA-binding domain protein; SMART: CoA-binding domain protein YP_008523942.1 KEGG: methylglyoxal synthase; PFAM: MGS domain protein; TIGRFAM: methylglyoxal synthase; HAMAP : Methylglyoxal synthase; SMART: MGS domain protein YP_008523943.1 PFAM: DNA helicase IV / RNA helicase domain-containing protein, Helicase superfamily 1 UvrD-related protein, UvrD-like DNA helicase; KEGG: helD, DNA helicase IV YP_008523944.1 PFAM: protein of unknown function DUF307; KEGG: hypothetical protein YP_008523945.1 TIGRFAM: Intergral membrane protein YccS, integral membrane protein, YccS/YhfK family; KEGG: hypothetical protein YP_008523946.1 PFAM: TfoX domain-containing protein; KEGG: sxy, CRP-S promoter co-activator YP_008523947.1 KEGG: sulA, SOS cell division inhibitor; HAMAP : Cell division inhibitor sulA; PFAM: cell division inhibitor SulA YP_008523948.1 PFAM: OmpA/MotB domain protein; KEGG: outer membrane protein A YP_008523949.1 PFAM: NADP-dependent oxidoreductase domain; KEGG: yajO, oxidoreductase YP_008523950.1 KEGG: nucleoside transporter; TIGRFAM: nucleoside transporter; PFAM: Na+ dependent nucleoside transporter domain protein, Na+ dependent nucleoside transporter, nucleoside recognition domain protein YP_008523951.1 KEGG: multidrug efflux system subunit MdtA; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_008523952.1 KEGG: multidrug efflux system subunit MdtB; HAMAP : Multidrug resistance protein mdtB; PFAM: acriflavin resistance protein YP_008523953.1 KEGG: acriflavin resistance protein; HAMAP : Multidrug resistance protein mdtC; PFAM: acriflavin resistance protein YP_008523954.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; HAMAP : multidrug resistance protein mdtD; KEGG: multidrug efflux system protein MdtE; PFAM: major facilitator superfamily MFS_1 YP_008523955.1 KEGG: baeS, sensory histidine kinase in two-component regulatory system with BaeR; PFAM: ATP-binding region ATPase domain protein, histidine kinase HAMP region domain protein, histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein, histidine kinase HAMP region domain protein YP_008523956.1 KEGG: DNA-binding transcriptional regulator BaeR; PFAM: response regulator receiver, transcriptional regulator domain-containing protein; SMART: response regulator receiver, transcriptional regulator domain-containing protein YP_008523957.1 KEGG: glutathione transferase YP_008523958.1 PFAM: peptidase U32; KEGG: peptidase U32 YP_008523959.1 KEGG: psiE, phosphate starvation inducible protein; HAMAP : Protein psiE; PFAM: Phosphate-starvation-inducible E-like protein YP_008523960.1 TIGRFAM: phosphomethylpyrimidine kinase; KEGG: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1 YP_008523961.1 PFAM: hydroxyethylthiazole kinase; TIGRFAM: hydroxyethylthiazole kinase; HAMAP : Hydroxyethylthiazole kinase; KEGG: hydroxyethylthiazole kinase YP_008523962.1 PFAM: Glyoxalase-like domain; KEGG: Lactoylglutathione lyase-like lyase YP_008523963.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: ABC transporter YP_008523964.1 PFAM: ABC transporter related protein; KEGG: ABC transporter; SMART: AAA ATPase YP_008523965.1 KEGG: ABC transporter substrate-binding protein YP_008523966.1 PFAM: inositol monophosphatase; KEGG: inositol monophosphatase YP_008523967.1 KEGG: LacI family transcriptional regulator; PFAM: regulatory protein LacI; SMART: regulatory protein LacI YP_008523968.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: LysR family transcriptional regulator YP_008523970.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: LysE-type translocator YP_008523971.1 PFAM: ABC-type transporter, periplasmic subunit; KEGG: family 5 extracellular solute-binding protein YP_008523972.1 KEGG: MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_008523973.1 PFAM: ABC transporter related protein; KEGG: ABC transporter-like protein YP_008523974.1 KEGG: nmra YP_008523975.1 PFAM: regulatory protein LysR, LysR substrate-binding protein; KEGG: transcriptional regulator YP_008523976.1 PFAM: transposase IS3/IS911 family protein; KEGG: transposase IS3/IS911 family protein YP_008523978.1 PFAM: IS66 Orf2 family protein; KEGG: IS66 Orf2 family protein YP_008523979.1 KEGG: hypothetical protein YP_008523980.1 KEGG: hypothetical protein YP_008523981.1 PFAM: major facilitator superfamily MFS_1; KEGG: transporter YP_008523982.1 KEGG: hypothetical protein; PFAM: Transketolase central region; SMART: Transketolase central region YP_008523983.1 PFAM: Transketolase domain-containing protein; KEGG: transketolase YP_008523984.1 KEGG: bifunctional protein: acetyl-glutamate kinase/acetyl-ornithine deacetylase; TIGRFAM: N-acetyl-ornithine/N-acetyl-lysine deacetylase; PFAM: peptidase M20, aspartate/glutamate/uridylate kinase YP_008523985.1 SMART: Semialdehyde dehydrogenase NAD - binding protein; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; KEGG: N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding protein YP_008523986.1 KEGG: pyridoxal-phosphate-dependent aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase YP_008523987.1 KEGG: hypothetical protein YP_008523988.1 KEGG: ribosomal protein S6 modification protein; TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: RimK domain protein ATP-grasp YP_008523989.1 KEGG: hypothetical protein YP_008523990.1 PFAM: NADPH-dependent FMN reductase; KEGG: ywqN, oxidoreductase YP_008523991.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: LysR family transcriptional regulator YP_008523992.1 SMART: helix-turn-helix domain protein; KEGG: hypothetical protein YP_008523993.1 PFAM: Protein of unknown function DUF3363; KEGG: VirD2 components relaxase YP_008523994.1 PFAM: RadC-like JAB domain; KEGG: DNA repair protein RadC YP_008523995.1 PFAM: Helix-turn-helix, AraC domain-containing protein; KEGG: rhaS, AraC family transcriptional regulator YP_008523996.1 KEGG: major facilitator transporter YP_008523997.1 PFAM: transposase mutator type; KEGG: transposase, mutator type YP_008523998.1 PFAM: protein of unknown function UPF0074; KEGG: AsnC family transcriptional regulator YP_008523999.1 KEGG: Short-chain dehydrogenase/reductase SDR YP_008524001.1 PFAM: Integrase catalytic region; KEGG: tnpA, putative transposase YP_008524002.1 PFAM: transposase IS3/IS911 family protein; KEGG: hypothetical protein YP_008524003.1 KEGG: aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_008524004.1 KEGG: hypothetical protein YP_008524005.1 KEGG: RSp0590, transcription regulator protein; PFAM: Helix-turn-helix, AraC domain-containing protein; SMART: Helix-turn-helix, AraC domain-containing protein YP_008524006.1 KEGG: short-chain dehydrogenase/reductase SDR YP_008524007.1 PFAM: integrase family protein, Domain of unknown function DUF4102; KEGG: integrase YP_008524008.1 PFAM: GMP synthase domain protein, NAD/GMP synthase, Glutamine amidotransferase type 1; TIGRFAM: GMP synthase, large subunit, GMP synthase, small subunit; HAMAP : GMP synthase [glutamine-hydrolyzing]; KEGG: GMP synthase, large subunit YP_008524009.1 KEGG: inosine 5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase, CBS domain containing protein; TIGRFAM: inosine-5'-monophosphate dehydrogenase; HAMAP : IMP dehydrogenase; SMART: CBS domain containing protein YP_008524010.1 TIGRFAM: exodeoxyribonuclease VII, large subunit; HAMAP : Exodeoxyribonuclease 7 large subunit; KEGG: xseA, exonuclease VII, large subunit; PFAM: Exonuclease VII, large subunit, OB-fold nucleic acid binding domain YP_008524011.1 KEGG: peptidase M4 thermolysin; PFAM: peptidase M4 thermolysin, Peptidase M4 thermolysin YP_008524012.1 KEGG: hypothetical protein YP_008524013.1 PFAM: protein of unknown function DUF1407; KEGG: hypothetical protein YP_008524014.1 TIGRFAM: ribosome-associated GTPase EngA, small GTP-binding protein; HAMAP : GTP-binding protein engA; KEGG: ribosome-associated GTPase EngA; PFAM: GTP1/OBG protein YP_008524015.1 TIGRFAM: outer membrane assembly lipoprotein YfgL; HAMAP : Outer membrane assembly lipoprotein YfgL; KEGG: outer membrane assembly lipoprotein YfgL; SMART: Pyrrolo-quinoline quinone beta-propeller repeat-containing protein YP_008524016.1 PFAM: Protein of unknown function DUF2133; KEGG: yfgM, hypothetical protein YP_008524017.1 PFAM: Anticodon-binding domain protein; TIGRFAM: histidyl-tRNA synthetase; HAMAP : Histidyl-tRNA synthetase; KEGG: hisS, histidyl tRNA synthetase YP_008524018.1 TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; HAMAP : 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; KEGG: ispG, 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; PFAM: IspG family protein YP_008524019.1 KEGG: cytoskeletal protein RodZ; PFAM: Domain of unknown function DUF4115; SMART: helix-turn-helix domain protein YP_008524020.1 KEGG: hypothetical protein; TIGRFAM: type IV pilus biogenesis/stability protein PilW; PFAM: Tetratricopeptide TPR_2 repeat-containing protein YP_008524021.1 TIGRFAM: radical SAM enzyme, Cfr family; HAMAP : Ribosomal RNA large subunit methyltransferase N; KEGG: rlmN, 23S rRNA m(2)A2503 methyltransferase; PFAM: Radical SAM domain protein YP_008524022.1 SMART: nucleoside diphosphate kinase; HAMAP : Nucleoside diphosphate kinase; KEGG: nucleoside-diphosphate kinase; PFAM: nucleoside diphosphate kinase YP_008524023.1 PFAM: Rhodanese-like protein; KEGG: sseA, 3-mercaptopyruvate sulfurtransferase; SMART: Rhodanese-like protein YP_008524024.1 PFAM: SseB family protein; KEGG: SseB family protein YP_008524025.1 HAMAP : Peptidase B; KEGG: aminopeptidase B; PFAM: peptidase M17 leucyl aminopeptidase domain protein, peptidase M17 peptidase B YP_008524026.1 KEGG: hypothetical protein; TIGRFAM: FeS assembly protein IscX; PFAM: ISC system FeS cluster assembly protein, IscX YP_008524027.1 KEGG: hypothetical protein; TIGRFAM: ferredoxin, 2Fe-2S type, ISC system; PFAM: ferredoxin YP_008524028.1 TIGRFAM: Fe-S protein assembly chaperone HscA; HAMAP : Chaperone protein hscA; KEGG: hscA, chaperone protein HscA; PFAM: Heat shock protein 70 YP_008524029.1 SMART: heat shock protein DnaJ domain protein; TIGRFAM: co-chaperone Hsc20; KEGG: hscB, chaperone protein hscB; HAMAP : Co-chaperone protein hscB; PFAM: HSC20 oligomerisation, heat shock protein DnaJ domain protein YP_008524030.1 TIGRFAM: iron-sulfur cluster assembly protein IscA, iron-sulfur cluster assembly accessory protein; HAMAP : Iron-binding protein iscA; KEGG: iscA, FeS cluster assembly protein; PFAM: HesB/YadR/YfhF-family protein YP_008524031.1 KEGG: scaffold protein; TIGRFAM: FeS cluster assembly scaffold IscU; PFAM: nitrogen-fixing NifU domain protein YP_008524032.1 PFAM: aminotransferase class V; TIGRFAM: cysteine desulfurase IscS; HAMAP : Cysteine desulfurase; KEGG: L-cysteine desulfurase YP_008524033.1 TIGRFAM: iron-sulfur cluster assembly transcription factor IscR, transcriptional regulator, Rrf2 family; HAMAP : HTH-type transcriptional regulator iscR; KEGG: iscR, Fe-S cluster-containing transcription factor; PFAM: protein of unknown function UPF0074 YP_008524034.1 KEGG: RNA methyltransferase, TrmH family, group 1; TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU) YP_008524035.1 KEGG: inositol monophosphatase; PFAM: inositol monophosphatase YP_008524036.1 PFAM: ABC-type transporter, periplasmic subunit; KEGG: ABC transporter substrate-binding protein YP_008524037.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: transport system permease protein YP_008524038.1 PFAM: ABC transporter related protein; KEGG: ABC transporter; SMART: AAA ATPase YP_008524039.1 PFAM: high-affinity nickel-transporter; KEGG: high-affinity nickel-transporter YP_008524040.1 PFAM: protein of unknown function DUF1007; KEGG: hypothetical protein YP_008524041.1 PFAM: major facilitator superfamily MFS_1; KEGG: major facilitator superfamily protein YP_008524042.1 HAMAP : Serine hydroxymethyltransferase; KEGG: glycine hydroxymethyltransferase; PFAM: glycine hydroxymethyltransferase YP_008524043.1 KEGG: Pectate lyase/Amb allergen; PFAM: Pectate lyase/Amb allergen; SMART: Pectate lyase/Amb allergen YP_008524044.1 KEGG: pectin acetylesterase YP_008524045.1 KEGG: pectinesterase; PFAM: Pectinesterase YP_008524046.1 KEGG: glnB, regulatory protein P-II for glutamine synthetase; PFAM: nitrogen regulatory protein P-II; SMART: nitrogen regulatory protein P-II YP_008524047.1 KEGG: transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein, response regulator receiver; SMART: response regulator receiver, AAA ATPase YP_008524048.1 PFAM: Quorum-sensing regulator protein G; KEGG: yfhG, alpha helix protein YP_008524049.1 KEGG: histidine kinase; PFAM: ATP-binding region ATPase domain protein, histidine kinase HAMP region domain protein, histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein YP_008524050.1 PFAM: AIR synthase related protein, AIR synthase related protein domain protein; TIGRFAM: phosphoribosylformylglycinamidine synthase; HAMAP : Phosphoribosylformylglycinamidine synthase; KEGG: phosphoribosylformylglycinamidine synthase YP_008524051.1 HAMAP : Membrane-bound lytic murein transglycosylase F; PFAM: ABC-type transporter, periplasmic subunit family 3, Lytic transglycosylase catalytic; KEGG: Lytic transglycosylase catalytic; SMART: ABC-type transporter, periplasmic subunit family 3 YP_008524052.1 PFAM: CMP/dCMP deaminase zinc-binding protein; KEGG: zinc-binding CMP/dCMP deaminase YP_008524053.1 TIGRFAM: glucokinase regulatory-like protein; HAMAP : N-acetylmuramic acid 6-phosphate etherase; KEGG: murQ, N-acetylmuramic acid 6-phosphate etherase; PFAM: sugar isomerase (SIS) YP_008524054.1 PFAM: transglutaminase family protein cysteine peptidase BTLCP; KEGG: hypothetical protein YP_008524055.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain-containing protein, histidine kinase HAMP region domain protein, GGDEF domain containing protein; KEGG: diguanylate cyclase/phosphodiesterase with extracellular sensor; SMART: GGDEF domain containing protein, histidine kinase HAMP region domain protein, EAL domain-containing protein YP_008524056.1 KEGG: Tryptophan synthase subunit beta like protein YP_008524057.1 KEGG: von Willebrand factor type A; TIGRFAM: type 1 secretion target domain-containng protein; PFAM: von Willebrand factor type A, Hemolysin-type calcium-binding region protein YP_008524058.1 KEGG: aggA, agglutination protein; TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein YP_008524059.1 SMART: AAA ATPase; TIGRFAM: type I secretion system ATPase; KEGG: type I secretion system ATPase; PFAM: ABC transporter related protein, ABC transporter transmembrane region YP_008524060.1 KEGG: HlyD family type I secretion membrane fusion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein YP_008524061.1 TIGRFAM: diguanylate cyclase, PAS sensor protein; PFAM: GGDEF domain containing protein, GAF domain protein; KEGG: PAS/PAC and GAF sensor-containing diguanylate cyclase; SMART: GGDEF domain containing protein, PAC repeat-containing protein, GAF domain protein YP_008524062.1 KEGG: yhjH, EAL domain containing protein; PFAM: EAL domain-containing protein; SMART: EAL domain-containing protein YP_008524063.1 PFAM: 4Fe-4S ferredoxin, iron-sulpur binding domain-containing protein; KEGG: 4Fe-4S ferredoxin YP_008524064.1 TIGRFAM: holo-acyl-carrier-protein synthase, phosphopantetheine-protein transferase; HAMAP : Holo-[acyl-carrier-protein] synthase; KEGG: acpS, 4'-phosphopantetheinyl transferase; PFAM: 4'-phosphopantetheinyl transferase YP_008524065.1 PFAM: Pyridoxal phosphate biosynthetic protein PdxJ; TIGRFAM: pyridoxal phosphate biosynthetic protein PdxJ; HAMAP : Pyridoxine 5'-phosphate synthase; KEGG: pyridoxal phosphate biosynthetic protein PdxJ YP_008524066.1 TIGRFAM: DNA repair protein RecO; HAMAP : DNA repair protein recO; KEGG: DNA repair protein RecO; PFAM: DNA replication/recombination mediator RecO, N-terminal, Recombination protein O RecO YP_008524067.1 TIGRFAM: GTP-binding protein Era, small GTP-binding protein; HAMAP : GTP-binding protein Era-like-protein; KEGG: GTP-binding protein Era; PFAM: GTP1/OBG protein, KH type 2 domain protein YP_008524068.1 KEGG: rnc, RNase III; PFAM: ribonuclease III, double-stranded RNA binding domain protein; TIGRFAM: ribonuclease III; HAMAP : Ribonuclease 3; SMART: ribonuclease III, double-stranded RNA binding domain protein YP_008524069.1 KEGG: signal peptidase I; TIGRFAM: signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region, Peptidase S26, conserved region YP_008524070.1 TIGRFAM: GTP-binding protein LepA, small GTP-binding protein; HAMAP : GTP-binding protein lepA; KEGG: GTP-binding protein LepA; PFAM: GTP-binding protein LepA domain protein, elongation factor Tu domain 2 protein, elongation factor G domain-containing protein, protein synthesis factor GTP-binding protein YP_008524071.1 PFAM: Positive regulator of sigma(E) RseC/MucC; KEGG: positive regulator of sigma E, RseC/MucC YP_008524072.1 PFAM: MucB/RseB family protein; KEGG: rseB, anti-sigma factor YP_008524073.1 PFAM: Anti sigma-E protein RseA family protein, Anti sigma-E protein RseA domain protein; KEGG: anti-RNA polymerase sigma factor SigE YP_008524074.1 KEGG: RNA polymerase sigma factor RpoE; TIGRFAM: RNA polymerase sigma factor RpoE, RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2, sigma-70 region 2 domain protein YP_008524075.1 TIGRFAM: L-aspartate oxidase; KEGG: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein, Fumarate reductase/succinate dehydrogenase flavoprotein-like protein YP_008524076.1 HAMAP : tRNA (adenine-N(6)-)-methyltransferase; KEGG: yfiC, S-adenosyl-L-methionine-dependent methyltransferase YP_008524077.1 KEGG: DEAD/DEAH box helicase domain-containing protein; PFAM: DEAD/DEAH box helicase domain protein, helicase domain-containing protein; SMART: DEAD-like helicase , helicase domain-containing protein YP_008524078.1 PFAM: transposase IS111A/IS1328/IS1533, transposase IS116/IS110/IS902 family protein; KEGG: transposase IS116/IS110/IS902 family protein YP_008524079.1 PFAM: DoxX family protein; KEGG: DoxX family protein YP_008524080.1 PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain-containing protein; TIGRFAM: glutamyl-tRNA synthetase; HAMAP : glutamyl-tRNA synthetase; KEGG: glutamyl-tRNA synthetase YP_008524081.1 SMART: Uracil-DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase; KEGG: uracil-DNA glycosylase; HAMAP : Uracil-DNA glycosylase; PFAM: Uracil-DNA glycosylase superfamily YP_008524082.1 KEGG: yfiD, pyruvate formate lyase subunit; HAMAP : Autonomous glycyl radical cofactor; PFAM: formate C-acetyltransferase glycine radical YP_008524083.1 PFAM: oxidoreductase domain protein, Oxidoreductase domain-containing protein; KEGG: oxidoreductase YP_008524084.1 PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: N-acetylglucosamine kinase YP_008524085.1 PFAM: ROK family protein; KEGG: ROK family protein YP_008524086.1 PFAM: ABC transporter related protein, Transport-associated OB domain-containing protein; KEGG: ABC transporter; SMART: AAA ATPase YP_008524087.1 PFAM: GCN5-related N-acetyltransferase; KEGG: Bifunctional protein NCOAT YP_008524088.1 KEGG: substrate-binding component of ABC transporter YP_008524089.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: sugar ABC transporter permease YP_008524090.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: yurM, ABC transporter permease yurM YP_008524091.1 PFAM: protein of unknown function DUF445; KEGG: hypothetical protein YP_008524092.1 KEGG: gldA, glycerol dehydrogenase; PFAM: iron-containing alcohol dehydrogenase YP_008524093.1 KEGG: hypothetical protein YP_008524094.1 SMART: AAA ATPase; TIGRFAM: sulfate ABC transporter, ATPase subunit; KEGG: sulfate ABC transporter ATPase subunit; PFAM: ABC transporter related protein, TOBE-like domain YP_008524095.1 KEGG: sulfate ABC transporter inner membrane subunit CysW; TIGRFAM: sulfate ABC transporter, inner membrane subunit CysW, sulfate ABC transporter, inner membrane subunit; PFAM: ABC-type transporter, integral membrane subunit YP_008524096.1 KEGG: sulfate ABC transporter inner membrane subunit CysT; TIGRFAM: sulfate ABC transporter, inner membrane subunit CysT, sulfate ABC transporter, inner membrane subunit; PFAM: ABC-type transporter, integral membrane subunit YP_008524097.1 TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; KEGG: sbp, sulfate ABC transporter substrate-binding protein YP_008524098.1 PFAM: sugar diacid recognition domain protein, PucR C-terminal helix-turn-helix domain; KEGG: transcriptional regulator CdaR YP_008524099.1 SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: protease Do; KEGG: protease Do; PFAM: PDZ/DHR/GLGF domain protein YP_008524100.1 SMART: metal-dependent phosphohydrolase HD region; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; KEGG: dgt, deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain-containing protein, Phosphohydrolase-associated domain YP_008524101.1 PFAM: purine or other phosphorylase family 1; TIGRFAM: MTA/SAH nucleosidase; HAMAP : 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; KEGG: pfs, 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase YP_008524102.1 KEGG: btuF, vitamin B12-transporter protein BtuF; HAMAP : Vitamin B12-binding protein; PFAM: ABC-type transporter, periplasmic subunit YP_008524103.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; HAMAP : Iron--sulfur cluster insertion protein erpA; KEGG: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein YP_008524104.1 PFAM: Cl- channel voltage-gated family protein; KEGG: Chloride channel core YP_008524105.1 PFAM: aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; HAMAP : Glutamate-1-semialdehyde 2,1-aminomutase; KEGG: glutamate-1-semialdehyde aminotransferase YP_008524106.1 TIGRFAM: penicillin-binding protein 1B; KEGG: penicillin-binding protein 1B; PFAM: glycosyl transferase family 51, penicillin-binding protein transpeptidase YP_008524107.1 TIGRFAM: ATP-dependent helicase HrpB; PFAM: Helicase ATP-dependent domain protein, helicase domain-containing protein, DEAD/DEAH box helicase domain protein, helicase-associated domain protein; KEGG: ATP-dependent RNA helicase HrpB; SMART: DEAD-like helicase , helicase domain-containing protein, helicase-associated domain protein YP_008524108.1 KEGG: ligT, 2'-5' RNA ligase; TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX YP_008524109.1 TIGRFAM: sugar fermentation stimulation protein; HAMAP : Sugar fermentation stimulation protein A; KEGG: sugar fermentation stimulation protein; PFAM: sugar fermentation stimulation protein YP_008524110.1 TIGRFAM: RNA polymerase-binding protein DksA; KEGG: dksA, RNA polymerase-binding transcription factor YP_008524111.1 TIGRFAM: glutamyl-queuosine tRNA(Asp) synthetase; HAMAP : Glutamyl-Q tRNA(Asp) synthetase; KEGG: glutamyl-Q tRNA(Asp) synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain-containing protein YP_008524112.1 TIGRFAM: poly(A) polymerase; KEGG: pcnB, poly(A) polymerase I; PFAM: Polymerase A arginine-rich C-terminal domain, Polynucleotide adenylyltransferase region YP_008524113.1 TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; KEGG: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK YP_008524114.1 PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; HAMAP : 3-methyl-2-oxobutanoate hydroxymethyltransferase; KEGG: panB, 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_008524115.1 TIGRFAM: pantoate/beta-alanine ligase; HAMAP : Pantothenate synthetase; KEGG: pantoate--beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase YP_008524116.1 PFAM: aspartate decarboxylase; TIGRFAM: aspartate 1-decarboxylase; HAMAP : Aspartate 1-decarboxylase; KEGG: aspartate alpha-decarboxylase YP_008524117.1 PFAM: ABC-2 type transporter; KEGG: ABC-2 type transporter YP_008524118.1 PFAM: ABC transporter related protein; KEGG: yadG, transporter ATP-binding protein; SMART: AAA ATPase YP_008524119.1 PFAM: carbonic anhydrase; KEGG: carbonate dehydratase; SMART: carbonic anhydrase YP_008524120.1 TIGRFAM: hypoxanthine phosphoribosyltransferase; KEGG: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_008524121.1 PFAM: GCN5-related N-acetyltransferase; KEGG: N-acetyltransferase GCN5 YP_008524122.1 KEGG: hypothetical protein YP_008524123.1 KEGG: hypothetical protein YP_008524124.1 PFAM: Chaperone lipoprotein, PulS/OutS-like; KEGG: hypothetical protein YP_008524125.1 TIGRFAM: spermidine synthase; HAMAP : Spermidine synthase; KEGG: spermidine synthase; PFAM: Spermine synthase YP_008524126.1 PFAM: S-adenosylmethionine decarboxylase related protein; TIGRFAM: S-adenosylmethionine decarboxylase proenzyme; HAMAP : S-adenosylmethionine decarboxylase proenzyme; KEGG: S-adenosylmethionine decarboxylase YP_008524128.1 KEGG: MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_008524129.1 PFAM: isochorismatase hydrolase; KEGG: isochorismatase hydrolase YP_008524130.1 PFAM: protein of unknown function DUF894 DitE; KEGG: major facilitator superfamily protein YP_008524131.1 SMART: Exonuclease; TIGRFAM: DNA polymerase III, epsilon subunit; KEGG: dnaQ, DNA polymerase III subunit epsilon; PFAM: Exonuclease RNase T and DNA polymerase III YP_008524132.1 HAMAP : Ribonuclease H; KEGG: Ribonuclease H; PFAM: ribonuclease H YP_008524133.1 PFAM: Methyltransferase type 11; KEGG: yafS, S-adenosyl-L-methionine-dependent methyltransferase YP_008524134.1 KEGG: gloB, hydroxyacylglutathione hydrolase; PFAM: beta-lactamase domain protein; TIGRFAM: hydroxyacylglutathione hydrolase; HAMAP : Hydroxyacylglutathione hydrolase; SMART: beta-lactamase domain protein YP_008524135.1 KEGG: mltD, membrane-bound lytic murein transglycosylase D; PFAM: Lytic transglycosylase catalytic, Peptidoglycan-binding lysin domain-containing protein; SMART: Peptidoglycan-binding LysM YP_008524136.1 KEGG: IS4 ORF YP_008524137.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: yafD, hypothetical protein YP_008524138.1 PFAM: Integrase catalytic region, Transposase IS30-like HTH domain; KEGG: Integrase catalytic subunit YP_008524139.1 KEGG: transposase/IS protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase YP_008524140.1 PFAM: Domain of unknown function DUF4102; KEGG: phage integrase family protein YP_008524141.1 TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein, AAA ATPase central domain protein, Clp ATPase domain-containing protein, Clp domain protein; KEGG: ATP-dependent chaperone ClpB; SMART: Clp ATPase domain-containing protein, AAA ATPase YP_008524142.1 KEGG: yfiH, hypothetical protein; TIGRFAM: Multi-copper polyphenol oxidoreductase, laccase; PFAM: Multi-copper polyphenol oxidoreductase, laccase YP_008524143.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase, RNA-binding S4 domain protein; KEGG: pseudouridine synthase, RluA family; SMART: RNA-binding S4 domain protein YP_008524144.1 KEGG: outer membrane protein assembly complex subunit YfiO; TIGRFAM: outer membrane assembly lipoprotein YfiO; HAMAP : Outer membrane assembly lipoprotein YfiO YP_008524145.1 KEGG: raiA, cold shock protein associated with 30S ribosomal subunit; TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA YP_008524146.1 TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase, Chorismate mutase, type II; KEGG: pheA, bifunctional chorismate mutase/prephenate dehydratase; SMART: Chorismate mutase YP_008524147.1 SMART: Chorismate mutase; TIGRFAM: chorismate mutase; KEGG: chorismate mutase; PFAM: Prephenate dehydrogenase, Chorismate mutase, type II YP_008524148.1 TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA YP_008524149.1 KEGG: two-component response-regulatory protein YehT; PFAM: LytTr DNA-binding region, response regulator receiver; SMART: LytTr DNA-binding region, response regulator receiver YP_008524150.1 PFAM: nucleoside recognition domain protein; KEGG: nucleoside recognition domain-containing protein YP_008524151.1 TIGRFAM: ribosomal protein L19; HAMAP : 50S ribosomal protein L19; KEGG: rplS, 50S ribosomal protein L19; PFAM: ribosomal protein L19 YP_008524152.1 PFAM: tRNA (guanine-N1-)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; HAMAP : tRNA (guanine-N(1)-)-methyltransferase; KEGG: trmD, tRNA (guanine-N(1)-)-methyltransferase YP_008524153.1 TIGRFAM: 16S rRNA processing protein RimM; HAMAP : Ribosome maturation factor rimM; KEGG: 16S rRNA processing protein RimM; PFAM: RimM protein, PRC-barrel domain protein YP_008524154.1 TIGRFAM: ribosomal protein S16; HAMAP : 30S ribosomal protein S16; KEGG: 30S ribosomal protein S16; PFAM: ribosomal protein S16 YP_008524155.1 SMART: GTP-binding signal recognition particle SRP54 G- domain-containing protein, AAA ATPase, GTP-binding signal recognition particle SRP54 helical bundle; TIGRFAM: signal recognition particle protein; KEGG: ffh, signal recognition particle protein; HAMAP : Signal recognition 54 kDa protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain-containing protein, Signal peptide binding (SRP54) M- domain protein, GTP-binding signal recognition particle SRP54 helical bundle YP_008524156.1 PFAM: cytochrome c assembly protein; KEGG: ypjD, inner membrane protein YP_008524157.1 HAMAP : S-ribosylhomocysteine lyase; KEGG: S-ribosylhomocysteinase; PFAM: LuxS protein YP_008524158.1 TIGRFAM: glutamate/cysteine ligase; HAMAP : Glutamate--cysteine ligase; KEGG: gshA, gamma-glutamate-cysteine ligase; PFAM: glutamate--cysteine ligase YP_008524159.1 TIGRFAM: beta-phosphoglucomutase family hydrolase, HAD-superfamily hydrolase, subfamily IA, variant 3; KEGG: fructose-1-phosphatase YP_008524160.1 TIGRFAM: carbon storage regulator; HAMAP : Carbon storage regulator; KEGG: carbon storage regulator; PFAM: carbon storage regulator YP_008524161.1 SMART: Threonyl/alanyl tRNA synthetase SAD; TIGRFAM: alanyl-tRNA synthetase; KEGG: alaS, alanyl-tRNA synthetase; HAMAP : Alanine-tRNA ligase, eukaryota/bacteria; PFAM: Alanyl-tRNA synthetase, class IIc, phosphoesterase DHHA1, Threonyl/alanyl tRNA synthetase SAD YP_008524162.1 KEGG: recX, recombination regulator RecX; HAMAP : Regulatory protein recX; PFAM: regulatory protein RecX YP_008524163.1 SMART: AAA ATPase; TIGRFAM: recA protein; KEGG: recA protein; HAMAP : Protein recA; PFAM: RecA domain protein YP_008524164.1 KEGG: competence damage-inducible protein A; TIGRFAM: CinA domain protein; PFAM: CinA domain protein YP_008524165.1 PFAM: cyclase/dehydrase; KEGG: hypothetical protein YP_008524166.1 PFAM: Di-heme cytochrome, transmembrane; KEGG: cytochrome B561 YP_008524167.1 PFAM: peptidase M50; KEGG: peptidase M50 YP_008524168.1 KEGG: hypothetical protein YP_008524169.1 KEGG: secretion protein HlyD family protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_008524170.1 PFAM: outer membrane efflux protein; KEGG: outer membrane efflux protein YP_008524171.1 KEGG: hypothetical protein YP_008524172.1 TIGRFAM: CRISPR-associated protein Cas1; HAMAP : CRISPR-associated protein Cas1; KEGG: hypothetical protein; PFAM: CRISPR-associated protein Cas1 YP_008524173.1 TIGRFAM: CRISPR-associated helicase Cas3 family; KEGG: hypothetical protein YP_008524174.1 KEGG: hypothetical protein; TIGRFAM: CRISPR-associated protein, Csy1 family; PFAM: CRISPR-associated protein Csy1 YP_008524175.1 KEGG: hypothetical protein; TIGRFAM: CRISPR-associated protein, Csy2 family; PFAM: CRISPR-associated protein Csy2 YP_008524176.1 KEGG: hypothetical protein; TIGRFAM: CRISPR-associated protein, Csy3 family; PFAM: CRISPR-associated protein Csy3 YP_008524177.1 KEGG: CRISPR-associated protein, Csy4 family; TIGRFAM: CRISPR-associated protein, Csy4 family; PFAM: CRISPR-associated protein Csy4 YP_008524178.1 KEGG: methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer, histidine kinase HAMP region domain protein, 4HB MCP domain; SMART: chemotaxis sensory transducer, histidine kinase HAMP region domain protein YP_008524179.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: diguanylate cyclase; SMART: GGDEF domain containing protein YP_008524180.1 KEGG: hypothetical protein; TIGRFAM: protein of unknown function UPF0047; PFAM: protein of unknown function UPF0047 YP_008524181.1 TIGRFAM: excinuclease ABC, A subunit; HAMAP : UvrABC system protein A; KEGG: excinuclease ABC subunit A; PFAM: ABC transporter related protein YP_008524182.1 KEGG: single-stranded DNA-binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n YP_008524183.1 KEGG: RNA-directed DNA polymerase YP_008524184.1 KEGG: hypothetical protein YP_008524185.1 KEGG: hypothetical protein YP_008524186.1 KEGG: hypothetical protein YP_008524187.1 PFAM: portal protein; KEGG: phage portal protein, PBSX family YP_008524188.1 SMART: AAA ATPase; TIGRFAM: molybdate ABC transporter, ATPase subunit; KEGG: molybdenum transport protein ModC; PFAM: ABC transporter related protein, TOBE domain-containing protein YP_008524189.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: molybdate ABC transporter inner membrane subunit YP_008524190.1 TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; KEGG: molybdenum ABC transporter periplasmic molybdate-binding protein YP_008524191.1 KEGG: GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH, GntR domain protein; SMART: regulatory protein GntR HTH YP_008524192.1 PFAM: ABC transporter related protein; KEGG: ABC transporter; SMART: AAA ATPase YP_008524193.1 KEGG: class IV aminotransferase; PFAM: aminotransferase class IV YP_008524194.1 KEGG: family 3 extracellular solute-binding protein; PFAM: ABC-type transporter, periplasmic subunit family 3; SMART: ABC-type transporter, periplasmic subunit family 3 YP_008524195.1 KEGG: polar amino acid ABC transporter inner membrane protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: ABC-type transporter, integral membrane subunit YP_008524196.1 KEGG: ABC transporter permease; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: ABC-type transporter, integral membrane subunit YP_008524197.1 PFAM: glycosyl transferase group 1; KEGG: group 1 glycosyl transferase YP_008524198.1 KEGG: group 1 glycosyl transferase YP_008524199.1 PFAM: polysaccharide biosynthesis protein; KEGG: hypothetical protein YP_008524200.1 PFAM: glycosyl transferase family 2; KEGG: rfbF, dtdp-rhamnosyl transferase rfbf protein YP_008524201.1 PFAM: ABC transporter related protein; KEGG: ABC transporter; SMART: AAA ATPase YP_008524202.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: ABC transporter YP_008524203.1 PFAM: ABC-type metal ion transporter, periplasmic subunit; KEGG: zinc ABC transporter substrate-binding protein ZnuA YP_008524204.1 KEGG: decarboxylase; TIGRFAM: Conserved hypothetical protein CHP00730; PFAM: Conserved hypothetical protein CHP00730 YP_008524205.1 KEGG: transcriptional regulator, IclR family; PFAM: Transcriptional regulator IclR , regulatory protein IclR; SMART: regulatory protein IclR YP_008524206.1 KEGG: gluconate transporter; TIGRFAM: gluconate transporter; PFAM: Gluconate transporter YP_008524207.1 TIGRFAM: dehydratase, YjhG/YagF family; KEGG: hypothetical protein; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase YP_008524208.1 KEGG: dihydrodipicolinate synthetase; PFAM: dihydrodipicolinate synthetase YP_008524209.1 PFAM: ABC transporter related protein, Transport-associated OB domain-containing protein; KEGG: ABC transporter; SMART: AAA ATPase YP_008524210.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transporters inner membrane component YP_008524211.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transporters inner membrane component YP_008524212.1 PFAM: extracellular solute-binding protein family 1; KEGG: family 1 extracellular solute-binding protein YP_008524213.1 PFAM: glycoside hydrolase family 38, glycosyl hydrolase 38 domain protein, Glycoside hydrolase family 38 central region; KEGG: glycoside hydrolase family protein; SMART: Glycoside hydrolase family 38 central region YP_008524214.1 PFAM: ROK family protein; KEGG: ROK family protein YP_008524215.1 KEGG: LacI family transcriptional regulator; PFAM: regulatory protein LacI; SMART: regulatory protein LacI YP_008524216.1 PFAM: Aldose 1-epimerase; KEGG: hypothetical protein YP_008524217.1 KEGG: DeoR family transcriptional regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_008524218.1 PFAM: Pyridoxal phosphate biosynthetic protein PdxA; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; HAMAP : 4-hydroxythreonine-4-phosphate dehydrogenase; KEGG: 4-hydroxythreonine-4-phosphate dehydrogenase YP_008524219.1 PFAM: type III effector Hrp-dependent outer protein; KEGG: Hrp-dependent type III effector protein YP_008524220.1 KEGG: iron-containing alcohol dehydrogenase; PFAM: iron-containing alcohol dehydrogenase YP_008524221.1 PFAM: dihydrodipicolinate synthetase; KEGG: dihydrodipicolinate synthetase YP_008524222.1 KEGG: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein, D-isomer specific 2-hydroxyacid dehydrogenase catalytic region-containing protein YP_008524223.1 PFAM: major facilitator superfamily MFS_1; KEGG: Hexuronate transporter YP_008524224.1 KEGG: hypothetical protein; HAMAP : UPF0231 protein yacL; PFAM: Uncharacterized conserved protein UCP006287 YP_008524225.1 KEGG: acnB, bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; TIGRFAM: aconitate hydratase 2; PFAM: Aconitase B, Aconitase B, HEAT-like protein, aconitate hydratase domain-containing protein YP_008524226.1 PFAM: Abhydrolase, bacterial; KEGG: dienelactone hydrolase YP_008524227.1 TIGRFAM: dihydrolipoamide dehydrogenase; KEGG: lpd, lipoamide dehydrogenase, E3 component is part of three enzyme complexes; PFAM: Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain, FAD-dependent pyridine nucleotide-disulfide oxidoreductase, pyridine nucleotide-disulfide oxidoreductase dimerization region YP_008524228.1 TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; KEGG: aceF, dihydrolipoamide acetyltransferase; PFAM: catalytic domain-containing protein, biotin/lipoyl attachment domain-containing protein, E3 binding domain-containing protein YP_008524229.1 TIGRFAM: 2-oxo-acid dehydrogenase E1 subunit, homodimeric type; KEGG: 2-oxo-acid dehydrogenase E1 subunit, homodimeric type; PFAM: Transketolase domain-containing protein YP_008524230.1 KEGG: pdhR, transcriptional regulator PdhR; PFAM: regulatory protein GntR HTH, GntR domain protein; SMART: regulatory protein GntR HTH, GntR domain protein YP_008524231.1 PFAM: amino acid permease-associated region; KEGG: aroP, aromatic amino acid transport protein AroP YP_008524233.1 TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; KEGG: yicJ, GPH family transporter YP_008524234.1 KEGG: Alpha-L-arabinofuranosidase II precursor; PFAM: glycoside hydrolase family 43 YP_008524235.1 KEGG: signaling modulator of AmpD, AmpE YP_008524236.1 KEGG: N-acetyl-anhydromuranmyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2 YP_008524237.1 TIGRFAM: nicotinate-nucleotide pyrophosphorylase; KEGG: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase, Quinolinate phosphoribosyl transferase domain-containing protein YP_008524238.1 KEGG: major pilin subunit YP_008524239.1 KEGG: hofB, hypothetical protein; PFAM: type II secretion system protein E; SMART: AAA ATPase YP_008524240.1 PFAM: Type II secretion system F domain-containing protein; KEGG: hofC, type 4 fimbrial assembly protein pilC YP_008524241.1 PFAM: IMP dehydrogenase/GMP reductase; TIGRFAM: guanosine monophosphate reductase; HAMAP : GMP reductase; KEGG: GMP reductase 2 YP_008524242.1 PFAM: Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; HAMAP : Dephospho-CoA kinase; KEGG: dephospho-CoA kinase YP_008524243.1 KEGG: yacF, hypothetical protein; HAMAP : UPF0289 protein yacF; PFAM: protein of unknown function DUF1342 YP_008524244.1 KEGG: yacG, DNA gyrase inhibitor; HAMAP : UPF0243 zinc-binding protein yacG; PFAM: Uncharacterized zinc-binding family protein YP_008524245.1 KEGG: mutT, nucleoside triphosphate pyrophosphohydrolase; TIGRFAM: mutator MutT protein; PFAM: NUDIX hydrolase YP_008524246.1 SMART: SecA DEAD domain protein, SecA preprotein cross-linking region; TIGRFAM: preprotein translocase, SecA subunit; KEGG: preprotein translocase subunit SecA; HAMAP : Protein translocase subunit secA; PFAM: SecA DEAD domain protein, SecA Wing and Scaffold domain-containing protein, SecA preprotein cross-linking region, SEC-C motif domain protein YP_008524247.1 KEGG: secM, SecA regulator SecM; HAMAP : Secretion monitor; PFAM: secretion monitor family proten YP_008524248.1 PFAM: protein of unknown function DUF721; KEGG: hypothetical protein YP_008524249.1 TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; HAMAP : UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; KEGG: UDP-3-0-acyl N-acetylglucosamine deacetylase; PFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase YP_008524250.1 SMART: Tubulin/FtsZ GTPase, Tubulin/FtsZ, 2-layer sandwich domain-containing protein; TIGRFAM: cell division protein FtsZ; KEGG: cell division protein FtsZ; HAMAP : cell division protein FtsZ; PFAM: Cell division protein FtsZ, C-terminal, Tubulin/FtsZ GTPase YP_008524251.1 TIGRFAM: cell division protein FtsA; PFAM: cell division protein FtsA; KEGG: ftsA, cell division protein FtsA; SMART: cell division protein FtsA YP_008524252.1 KEGG: cell division protein FtsQ; HAMAP : Cell division protein FtsQ; PFAM: cell division protein FtsQ, Polypeptide-transport-associated domain protein FtsQ-type YP_008524253.1 PFAM: D-alanine--D-alanine ligase domain protein; TIGRFAM: D-alanine/D-alanine ligase; HAMAP : D-alanine--D-alanine ligase; KEGG: D-alanine--D-alanine ligase YP_008524254.1 PFAM: Mur ligase middle domain protein, cytoplasmic peptidoglycan synthetase domain protein; TIGRFAM: UDP-N-acetylmuramate/alanine ligase; HAMAP : UDP-N-acetylmuramate--L-alanine ligase; KEGG: murC, UDP-N-acetylmuramate--L-alanine ligase YP_008524255.1 TIGRFAM: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; HAMAP : UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; KEGG: murG, undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; PFAM: glycosyl transferase family 28, Glycosyltransferase 28 domain-containing protein YP_008524256.1 TIGRFAM: cell division protein FtsW; HAMAP : Cell division protein FtsW; KEGG: cell division protein FtsW; PFAM: cell cycle protein YP_008524257.1 PFAM: Mur ligase middle domain protein, cytoplasmic peptidoglycan synthetase domain protein; TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; HAMAP : UDP-N-acetylmuramoylalanine--D-glutamate ligase; KEGG: murD, UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase YP_008524258.1 TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; HAMAP : Phospho-N-acetylmuramoyl-pentapeptide-transferase; KEGG: mraY, phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: glycosyl transferase family 4, Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site-containing protein YP_008524259.1 TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; KEGG: murF, UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; PFAM: Mur ligase middle domain protein, cytoplasmic peptidoglycan synthetase domain protein YP_008524260.1 PFAM: Mur ligase middle domain protein, cytoplasmic peptidoglycan synthetase domain protein; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; HAMAP : UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; KEGG: UDP-N-acetylmuramyl-tripeptide synthetase YP_008524261.1 KEGG: peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase, Penicillin-binding protein dimerization domain-containing protein YP_008524262.1 TIGRFAM: cell division protein FtsL; HAMAP : cell division protein FtsL family protein; KEGG: cell division protein FtsL; PFAM: cell division protein FtsL family protein YP_008524263.1 TIGRFAM: S-adenosyl-methyltransferase MraW; HAMAP : Ribosomal RNA small subunit methyltransferase H; KEGG: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase YP_008524264.1 TIGRFAM: MraZ protein; HAMAP : Protein mraZ; KEGG: cell division protein MraZ; PFAM: MraZ domain-containing protein YP_008524265.1 KEGG: ygaW, inner membrane protein; HAMAP : protein of unknown function DUF1144; PFAM: protein of unknown function DUF1144 YP_008524266.1 TIGRFAM: D-fructose-responsive transcription factor; PFAM: regulatory protein LacI, periplasmic binding protein/LacI transcriptional regulator; KEGG: DNA-binding transcriptional regulator FruR; SMART: regulatory protein LacI YP_008524267.1 TIGRFAM: acetolactate synthase, small subunit; KEGG: ilvH, acetolactate synthase 3 regulatory subunit; PFAM: Acetolactate synthase, small subunit YP_008524268.1 TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; KEGG: acetolactate synthase 3 catalytic subunit; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein, thiamine pyrophosphate central domain-containing protein YP_008524269.1 KEGG: FAA1 protein; PFAM: AMP-dependent synthetase and ligase YP_008524270.1 KEGG: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase, LeuA allosteric (dimerization) domain-containing protein; TIGRFAM: 2-isopropylmalate synthase; HAMAP : 2-isopropylmalate synthase; SMART: LeuA allosteric (dimerization) domain-containing protein YP_008524271.1 PFAM: Isopropylmalate dehydrogenase-like domain; TIGRFAM: 3-isopropylmalate dehydrogenase; HAMAP : 3-isopropylmalate dehydrogenase; KEGG: 3-isopropylmalate dehydrogenase YP_008524272.1 TIGRFAM: 3-isopropylmalate dehydratase, large subunit; HAMAP : 3-isopropylmalate dehydratase large subunit; KEGG: leuC, 3-isopropylmalate isomerase dehydratase subunit; PFAM: aconitate hydratase domain-containing protein YP_008524273.1 TIGRFAM: 3-isopropylmalate dehydratase, small subunit; HAMAP : 3-isopropylmalate dehydratase small subunit; KEGG: leuD, isopropylmalate isomerase small subunit; PFAM: aconitate hydratase domain-containing protein YP_008524274.1 TIGRFAM: tryptophanase leader peptide; KEGG: tryptophanase leader peptide YP_008524275.1 PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; TIGRFAM: tryptophanase; HAMAP : Tryptophanase; KEGG: tryptophanase YP_008524276.1 KEGG: hypothetical protein YP_008524277.1 PFAM: Transcriptional regulator SgrR, N-terminal HTH domain, ABC-type transporter, periplasmic subunit; KEGG: transcriptional regulator SgrR YP_008524278.1 TIGRFAM: thiamine ABC transporter, periplasmic binding protein, ABC transporter, periplasmic binding protein, thiB subfamily; KEGG: thiamine ABC transporter periplasmic binding protein YP_008524279.1 KEGG: thiamine/thiamine pyrophosphate ABC transporter permease; TIGRFAM: thiamine ABC transporter, inner membrane subunit; PFAM: ABC-type transporter, integral membrane subunit YP_008524280.1 SMART: AAA ATPase; TIGRFAM: ABC transporter, ATPase subunit, ThiQ subfamily; KEGG: thiQ, thiamine transporter ATP-binding subunit; PFAM: ABC transporter related protein YP_008524281.1 TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; KEGG: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein, thiamine pyrophosphate central domain-containing protein YP_008524282.1 KEGG: ilvN, acetolactate synthase small subunit YP_008524283.1 PFAM: SNARE associated protein; KEGG: hypothetical protein YP_008524284.1 KEGG: branched-chain amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter related protein; SMART: AAA ATPase YP_008524285.1 PFAM: ABC transporter related protein; KEGG: ABC transporter; SMART: AAA ATPase YP_008524286.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: inner-membrane translocator YP_008524287.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: inner-membrane translocator YP_008524288.1 KEGG: extracellular ligand-binding receptor YP_008524289.1 KEGG: polB, DNA polymerase II; PFAM: DNA polymerase B region, DNA polymerase B exonuclease; SMART: DNA-directed DNA polymerase B YP_008524290.1 HAMAP : RNA polymerase-associated protein rapA; PFAM: RNA polymerase recycling, bacterial, C-terminal, SNF2-related protein, helicase domain-containing protein; KEGG: hepA, ATP-dependent helicase HepA; SMART: DEAD-like helicase , helicase domain-containing protein YP_008524291.1 PFAM: pseudouridine synthase; KEGG: pseudouridine synthase YP_008524292.1 HAMAP : DnaJ-like protein djlA; PFAM: heat shock protein DnaJ domain protein, Tellurite resistance TerB; KEGG: djlA, Dna-J like membrane chaperone protein; SMART: heat shock protein DnaJ domain protein YP_008524293.1 KEGG: Organic solvent tolerance protein; HAMAP : LPS-assembly protein lptD; PFAM: Organic solvent tolerance protein, OstA family protein YP_008524294.1 KEGG: Peptidylprolyl isomerase; HAMAP : Chaperone surA; PFAM: SurA domain-containing protein YP_008524295.1 PFAM: Pyridoxal phosphate biosynthetic protein PdxA; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; HAMAP : 4-hydroxythreonine-4-phosphate dehydrogenase; KEGG: pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase YP_008524296.1 SMART: Ribosomal RNA adenine methylase transferase; TIGRFAM: dimethyladenosine transferase; KEGG: ksgA, dimethyladenosine transferase; HAMAP : Ribosomal RNA small subunit methyltransferase A; PFAM: ribosomal RNA adenine methylase transferase YP_008524297.1 KEGG: ApaG domain-containing protein; HAMAP : Protein ApaG; PFAM: ApaG domain protein YP_008524298.1 PFAM: metallophosphoesterase; TIGRFAM: bis(5'-nucleosyl)-tetraphosphatase (symmetrical); HAMAP : Bis(5'-nucleosyl)-tetraphosphatase, symmetrical; KEGG: apaH, diadenosine tetraphosphatase YP_008524299.1 PFAM: protein of unknown function DUF839; KEGG: hypothetical protein YP_008524300.1 KEGG: folA, dihydrofolate reductase; PFAM: dihydrofolate reductase region YP_008524301.1 KEGG: hypothetical protein; HAMAP : UPF0442 protein yjjB; PFAM: Domain of unknown function DUF3815 YP_008524302.1 PFAM: protein of unknown function DUF1212; KEGG: yjjP, inner membrane protein YP_008524303.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: LysE-type translocator YP_008524304.1 KEGG: carB, carbamoyl-phosphate synthase large subunit; PFAM: Carbamoyl-phosphate synthetase large chain oligomerisation, Carbamoyl-phosphate synthase L chain ATP-binding protein, MGS domain protein, Carbamoyl-phosphate synthetase large chain domain protein; TIGRFAM: carbamoyl-phosphate synthase, large subunit; HAMAP : Carbamoyl-phosphate synthase large subunit glutamine-dependent; SMART: Carbamoyl-phosphate synthetase large chain oligomerisation, MGS domain protein YP_008524305.1 KEGG: carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase small chain, Glutamine amidotransferase type 1; TIGRFAM: carbamoyl-phosphate synthase, small subunit; HAMAP : Carbamoyl-phosphate synthase small chain; SMART: Carbamoyl-phosphate synthase small chain YP_008524306.1 PFAM: Dihydrodipicolinate reductase, C-terminal, dihydrodipicolinate reductase; TIGRFAM: dihydrodipicolinate reductase; HAMAP : Dihydrodipicolinate reductase; KEGG: dihydrodipicolinate reductase YP_008524307.1 PFAM: LytB protein; TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; HAMAP : 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; KEGG: ispH, 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase 4Fe-4S protein YP_008524308.1 KEGG: peptidylprolyl isomerase FKBP-type; PFAM: peptidylprolyl isomerase FKBP-type YP_008524309.1 PFAM: peptidase A8 signal peptidase II; TIGRFAM: lipoprotein signal peptidase; HAMAP : Lipoprotein signal peptidase; KEGG: lipoprotein signal peptidase YP_008524310.1 TIGRFAM: isoleucyl-tRNA synthetase; HAMAP : Isoleucyl-tRNA synthetase; KEGG: isoleucyl-tRNA synthetase YP_008524311.1 SMART: Riboflavin kinase; TIGRFAM: riboflavin biosynthesis protein RibF; KEGG: bifunctional riboflavin kinase/FMN adenylyltransferase; PFAM: FAD synthetase, Riboflavin kinase YP_008524312.1 TIGRFAM: ribosomal protein S20; HAMAP : 30S ribosomal protein S20; KEGG: rpsT, 30S ribosomal protein S20; PFAM: ribosomal protein S20 YP_008524313.1 PFAM: regulatory protein LysR, LysR substrate-binding protein; KEGG: nhaR, transcriptional activator NhaR YP_008524314.1 TIGRFAM: Na+/H+ antiporter NhaA; HAMAP : Na(+)/H(+) antiporter nhaA; KEGG: nhaA, pH-dependent sodium/proton antiporter; PFAM: Na+/H+ antiporter NhaA YP_008524315.1 SMART: heat shock protein DnaJ domain protein; TIGRFAM: chaperone protein DnaJ; KEGG: chaperone protein DnaJ; HAMAP : Chaperone protein dnaJ; PFAM: heat shock protein DnaJ domain protein, chaperone DnaJ domain protein, DnaJ central domain protein YP_008524316.1 TIGRFAM: chaperone protein DnaK; HAMAP : Chaperone protein dnaK; KEGG: dnaK, molecular chaperone DnaK; PFAM: Heat shock protein 70 YP_008524318.1 PFAM: GPR1/FUN34/yaaH family protein; KEGG: hypothetical protein YP_008524319.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase), Group II intron maturase-specific domain protein; KEGG: RNA-directed DNA polymerase YP_008524320.1 PFAM: major facilitator superfamily MFS_1; KEGG: Proline/betaine transporter YP_008524321.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain-containing protein; KEGG: mogA, molybdenum cofactor biosynthesis protein MogA; SMART: molybdopterin binding domain-containing protein YP_008524322.1 TIGRFAM: transaldolase; HAMAP : Transaldolase; KEGG: transaldolase B; PFAM: Transaldolase YP_008524323.1 KEGG: hypothetical protein; HAMAP : UPF0246 protein yaaA; PFAM: protein of unknown function DUF328 YP_008524324.1 TIGRFAM: threonine synthase; KEGG: thrC, threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_008524325.1 TIGRFAM: homoserine kinase; HAMAP : Homoserine kinase; KEGG: homoserine kinase; PFAM: GHMP kinase, GHMP kinase domain protein YP_008524326.1 KEGG: aspartate kinase; TIGRFAM: aspartate kinase; PFAM: homoserine dehydrogenase, homoserine dehydrogenase NAD-binding protein, amino acid-binding ACT domain-containing protein, aspartate/glutamate/uridylate kinase YP_008524327.1 KEGG: putative RNA methyltransferase; TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU) YP_008524328.1 KEGG: two-component response regulator; PFAM: response regulator receiver, transcriptional regulator domain-containing protein; SMART: response regulator receiver, transcriptional regulator domain-containing protein YP_008524329.1 PFAM: CreA family protein; KEGG: creA, hypothetical protein YP_008524330.1 KEGG: AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC domain-containing protein, transcription activator effector binding protein; SMART: Helix-turn-helix, AraC domain-containing protein, transcription activator effector binding protein YP_008524331.1 SMART: Phosphoglycerate mutase; HAMAP : phosphoglycerate mutase gpmB; KEGG: phosphoglycerate mutase; PFAM: Phosphoglycerate mutase YP_008524332.1 TIGRFAM: protein of unknown function DUF84; HAMAP : UPF0244 protein yjjX; KEGG: NTPase; PFAM: Non-canonical purine NTP phosphatase/PRRC1 YP_008524333.1 TIGRFAM: trp operon repressor; HAMAP : Trp operon repressor; KEGG: trpR, tryptophan-binding transcriptional repressor; PFAM: Trp repressor YP_008524334.1 PFAM: Lytic transglycosylase catalytic; KEGG: lytic transglycosylase YP_008524335.1 TIGRFAM: ATP-binding cassette protein, ChvD family; PFAM: ABC transporter related protein; KEGG: ABC transporter ATP-binding protein; SMART: AAA ATPase YP_008524336.1 KEGG: methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer, ligand binding Tar domain protein, histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer, histidine kinase HAMP region domain protein YP_008524337.1 KEGG: D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein, D-isomer specific 2-hydroxyacid dehydrogenase catalytic region-containing protein, amino acid-binding ACT domain-containing protein YP_008524338.1 PFAM: Ribose 5-phosphate isomerase; TIGRFAM: ribose 5-phosphate isomerase; HAMAP : Ribose-5-phosphate isomerase A; KEGG: ribose 5-phosphate isomerase YP_008524339.1 TIGRFAM: transcriptional regulator, ArgP family; HAMAP : Chromosome initiation inhibitor; KEGG: chromosome replication initiation inhibitor protein; PFAM: regulatory protein LysR, LysR substrate-binding protein YP_008524340.1 PFAM: protein of unknown function DUF541; KEGG: hypothetical protein YP_008524341.1 TIGRFAM: L-lysine exporter; HAMAP : Arginine exporter protein ArgO; KEGG: argO, arginine exporter protein; PFAM: Lysine exporter protein (LYSE/YGGA) YP_008524342.1 KEGG: IclR family transcriptional regulator; PFAM: Transcriptional regulator IclR , regulatory protein IclR; SMART: regulatory protein IclR YP_008524343.1 KEGG: ABC transporter-like protein; PFAM: ABC transporter related protein YP_008524344.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: monosaccharide-transporting ATPase YP_008524345.1 PFAM: Periplasmic binding protein domain; KEGG: hypothetical protein YP_008524346.1 KEGG: gluconolactonase; PFAM: SMP-30/Gluconolaconase/LRE-like region-containing protein YP_008524347.1 PFAM: MscS Mechanosensitive ion channel, Conserved TM helix repeat-containing protein; KEGG: mechanosensitive ion channel protein MscS YP_008524348.1 TIGRFAM: fructose-bisphosphate aldolase, class II, ketose-bisphosphate aldolase; KEGG: fructose-bisphosphate aldolase, class II; PFAM: ketose-bisphosphate aldolase class-II YP_008524349.1 HAMAP : Phosphoglycerate kinase; KEGG: phosphoglycerate kinase; PFAM: phosphoglycerate kinase YP_008524350.1 KEGG: D-erythrose-4-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain-containing protein, Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain-containing protein; TIGRFAM: D-erythrose-4-phosphate dehydrogenase; HAMAP : D-erythrose-4-phosphate dehydrogenase; SMART: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain-containing protein YP_008524351.1 SMART: Transketolase central region; TIGRFAM: transketolase; KEGG: transketolase; PFAM: Transketolase domain-containing protein, Transketolase central region YP_008524352.1 PFAM: Orn/DAP/Arg decarboxylase 2, N-terminal, Orn/DAP/Arg decarboxylase 2, C-terminal; TIGRFAM: arginine decarboxylase; HAMAP : Biosynthetic arginine decarboxylase; KEGG: arginine decarboxylase YP_008524354.1 PFAM: S-adenosylmethionine synthetase, C-terminal, S-adenosylmethionine synthetase, N-terminal, S-adenosylmethionine synthetase, central domain; TIGRFAM: S-adenosylmethionine synthetase; HAMAP : S-adenosylmethionine synthase; KEGG: metK, S-adenosylmethionine synthetase YP_008524355.1 HAMAP : Protein sprT; PFAM: protein of unknown function SprT; KEGG: sprT, hypothetical protein; SMART: protein of unknown function SprT YP_008524356.1 KEGG: nucM, nuclease; PFAM: Endonuclease I YP_008524357.1 KEGG: 16S ribosomal RNA methyltransferase RsmE; TIGRFAM: Ribosomal RNA small subunit methyltransferase E; PFAM: Ribosomal RNA small subunit methyltransferase E YP_008524358.1 PFAM: glutathione synthetase ATP-binding protein, glutathione synthetase domain protein; TIGRFAM: glutathione synthetase; HAMAP : Glutathione synthetase; KEGG: gshB, glutathione synthetase YP_008524359.1 KEGG: hypothetical protein; HAMAP : UPF0301 protein yqgE; PFAM: protein of unknown function DUF179 YP_008524360.1 SMART: Resolvase RNase H domain protein fold-containing protein; TIGRFAM: Holliday junction resolvase YqgF; KEGG: Holliday junction resolvase-like protein; HAMAP : Holliday junction resolvase; PFAM: Holliday junction resolvase YqgF YP_008524361.1 TIGRFAM: aspartate kinase, monofunctional class, aspartate kinase; KEGG: lysC, aspartokinase III; PFAM: aspartate/glutamate/uridylate kinase, amino acid-binding ACT domain-containing protein YP_008524362.1 HAMAP : Glucose-6-phosphate isomerase; KEGG: pgi, glucose-6-phosphate isomerase; PFAM: phosphoglucose isomerase (PGI) YP_008524363.1 PFAM: Protein of unknown function DUF4156; KEGG: hypothetical protein YP_008524364.1 TIGRFAM: lysine-2,3-aminomutase-related protein, lysine 2,3-aminomutase YodO family protein; KEGG: lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein YP_008524365.1 SMART: Elongation factor P; TIGRFAM: translation elongation factor P; KEGG: elongation factor P; HAMAP : Elongation factor P; PFAM: Elongation factor P , Elongation factor P/YeiP protein, Elongation factor KOW-like domain-containing protein YP_008524366.1 HAMAP : Fructose-1,6-bisphosphatase class 1; KEGG: fructose-1,6-bisphosphatase; PFAM: Inositol phosphatase/fructose-16-bisphosphatase YP_008524367.1 TIGRFAM: UDP-N-acetylmuramate; KEGG: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase; PFAM: Mur ligase middle domain protein, cytoplasmic peptidoglycan synthetase domain protein YP_008524368.1 KEGG: adenylosuccinate synthetase; PFAM: adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthetase; HAMAP : Adenylosuccinate synthetase; SMART: adenylosuccinate synthetase YP_008524369.1 PFAM: Protein of unknown function DUF2065; KEGG: hypothetical protein YP_008524370.1 TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: HflC protein; SMART: band 7 protein YP_008524371.1 TIGRFAM: HflK protein; PFAM: band 7 protein, Protein HflK domain-containing protein; KEGG: HflK protein; SMART: band 7 protein YP_008524372.1 TIGRFAM: GTP-binding proten HflX; HAMAP : GTP-binding protein, HflX; KEGG: GTPase HflX; PFAM: GTP1/OBG protein, GTPase HflX N-terminal domain YP_008524373.1 TIGRFAM: RNA chaperone Hfq; HAMAP : Protein hfq; KEGG: hfq, RNA-binding protein Hfq; PFAM: Like-Sm ribonucleoprotein core YP_008524374.1 PFAM: tRNA isopentenyltransferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; KEGG: tRNA delta(2)-isopentenylpyrophosphate transferase; HAMAP : tRNA dimethylallyltransferase YP_008524375.1 SMART: MutL dimerization; TIGRFAM: DNA mismatch repair protein MutL; KEGG: hypothetical protein; HAMAP : DNA mismatch repair protein mutL; PFAM: DNA mismatch repair protein domain protein, MutL dimerization YP_008524376.1 KEGG: N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin, Peptidoglycan-binding lysin domain-containing protein, localization of periplasmic protein complexes; SMART: cell wall hydrolase/autolysin, Peptidoglycan-binding LysM YP_008524377.1 KEGG: hypothetical protein; TIGRFAM: Uncharacterized protein family UPF0079, ATPase; PFAM: Uncharacterized protein family UPF0079, ATPase YP_008524378.1 TIGRFAM: YjeF-related protein; HAMAP : NAD(P)H-hydrate epimerase, ADP/ATP-dependent (S)-NAD(P)H-hydrate dehydratase; KEGG: hypothetical protein; PFAM: carbohydrate kinase-related protein, YjeF-family domain-containing protein YP_008524379.1 TIGRFAM: iron-sulfur cluster binding protein; HAMAP : 4Fe-4S cluster binding protein; KEGG: yjeS, Fe-S electron transport protein; PFAM: domain of unknown function DUF1730 YP_008524380.1 KEGG: hypothetical protein YP_008524381.1 KEGG: hypothetical protein YP_008524382.1 PFAM: ABC transporter related protein; KEGG: ABC transporter; SMART: AAA ATPase YP_008524383.1 PFAM: MacB-like periplasmic core domain, protein of unknown function DUF214; KEGG: hypothetical protein YP_008524384.1 PFAM: outer membrane efflux protein; KEGG: outer membrane efflux protein YP_008524385.1 KEGG: secretion protein HlyD family protein YP_008524386.1 KEGG: D-isomer specific 2-hydroxyacid dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein YP_008524387.1 KEGG: hypothetical protein YP_008524388.1 KEGG: hypothetical protein YP_008524389.1 PFAM: Fucose-binding lectin II; KEGG: hypothetical protein YP_008524391.1 KEGG: hypothetical protein YP_008524392.1 KEGG: Ohr subfamily peroxiredoxin; TIGRFAM: peroxiredoxin, Ohr subfamily; PFAM: OsmC family protein YP_008524393.1 KEGG: transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_008524394.1 PFAM: AbgT transporter; KEGG: abgT, aminobenzoyl-glutamate transport protein YP_008524395.1 KEGG: amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20, peptidase dimerization domain protein YP_008524396.1 TIGRFAM: amidohydrolase; KEGG: amidohydrolase; PFAM: peptidase M20, peptidase dimerization domain protein YP_008524397.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: putative DNA-binding transcriptional regulator YP_008524398.1 PFAM: NifQ family protein; KEGG: NifQ family protein YP_008524399.1 KEGG: nifB, FeMo cofactor biosynthesis protein NifB; TIGRFAM: nitrogenase cofactor biosynthesis protein NifB; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein, Radical SAM domain protein YP_008524400.1 TIGRFAM: Nif-specific regulatory protein; PFAM: sigma-54 factor interaction domain-containing protein, helix-turn-helix Fis-type, GAF domain protein; KEGG: Fis Family transcriptional regulator NifA; SMART: GAF domain protein, AAA ATPase YP_008524401.1 KEGG: nifL, nitrogen fixation regulatory protein; TIGRFAM: nitrogen fixation negative regulator NifL, PAS sensor protein; SMART: PAC repeat-containing protein, PAS domain containing protein YP_008524402.1 KEGG: flavodoxin FldA; TIGRFAM: flavodoxin; PFAM: flavodoxin/nitric oxide synthase YP_008524403.1 KEGG: Levansucrase/Invertase; PFAM: glycoside hydrolase family 68 YP_008524404.1 KEGG: nifM, peptidyl-prolyl cis-trans isomerase ppiD; TIGRFAM: nitrogen fixation protein NifM; PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase YP_008524405.1 PFAM: NifZ family protein; KEGG: nifZ, NifZ protein YP_008524406.1 PFAM: nitrogen fixation protein NifW; KEGG: nifW, nitrogenase-stabilizing/protective protein nifW YP_008524407.1 TIGRFAM: homocitrate synthase; KEGG: nifV, homocitrate synthase; PFAM: pyruvate carboxyltransferase YP_008524408.1 TIGRFAM: cysteine desulfurase NifS; KEGG: cysteine desulfurase NifS; PFAM: aminotransferase class V YP_008524409.1 KEGG: nifU, Iron-sulfur cluster assembly scaffold protein NifU; TIGRFAM: Fe-S cluster assembly protein NifU; PFAM: nitrogen-fixing NifU domain protein, nitrogen-fixing NifU domain-containing protein, BFD domain protein [2Fe-2S]-binding domain protein YP_008524410.1 PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: dinitrogenase iron-molybdenum cofactor biosynthesis protein YP_008524411.1 TIGRFAM: nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; KEGG: nifN, nitrogenase molybdenum-cofactor synthesis protein NifN; PFAM: oxidoreductase/nitrogenase component 1 YP_008524412.1 TIGRFAM: nitrogenase MoFe cofactor biosynthesis protein NifE; KEGG: nifE, nitrogenase molybdenum-cofactor synthesis protein NifE; PFAM: oxidoreductase/nitrogenase component 1 YP_008524413.1 PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: dinitrogenase iron-molybdenum cofactor biosynthesis protein YP_008524414.1 PFAM: NifT/FixU family protein; KEGG: nifT, protein nifT YP_008524415.1 TIGRFAM: nitrogenase molybdenum-iron protein beta chain; KEGG: nitrogenase molybdenum-iron protein subunit beta; PFAM: oxidoreductase/nitrogenase component 1, Nitrogenase molybdenum-iron protein beta chain, N-terminal YP_008524416.1 TIGRFAM: nitrogenase molybdenum-iron protein alpha chain, nitrogenase component I, alpha chain; KEGG: nifD, nitrogenase (molybdenum-iron) subunit alpha; PFAM: oxidoreductase/nitrogenase component 1 YP_008524417.1 PFAM: NifH/frxC-family protein; TIGRFAM: nitrogenase iron protein; HAMAP : Nitrogenase iron protein; KEGG: nitrogenase iron protein YP_008524418.1 SMART: Pyruvate-flavodoxin oxidoreductase, EKR domain-containing protein; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein, Pyruvate/ketoisovalerate oxidoreductase, Pyruvate-flavodoxin oxidoreductase, EKR domain-containing protein, thiamine pyrophosphate TPP-binding domain-containing protein, 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_008524419.1 KEGG: transcriptional regulator; PFAM: UbiC transcription regulator-associated domain-containing protein, regulatory protein GntR HTH; SMART: UbiC transcription regulator-associated domain-containing protein, regulatory protein GntR HTH YP_008524420.1 TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: ABC-type transporter, periplasmic subunit family 3; KEGG: lysine-arginine-ornithine-binding periplasmic protein; SMART: ABC-type transporter, periplasmic subunit family 3 YP_008524421.1 PFAM: sugar isomerase (SIS); KEGG: putative phosphosugar isomerase YP_008524422.1 PFAM: PfkB domain protein; KEGG: sugar kinase YP_008524423.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: lysine export protein YP_008524424.1 KEGG: AsnC family transcriptional regulator; PFAM: Transcription regulator, AsnC-type; SMART: Transcription regulator, AsnC-type YP_008524425.1 KEGG: dyp-type peroxidase family protein; TIGRFAM: Tat-translocated protein, Dyp-type peroxidase family; PFAM: Dyp-type peroxidase YP_008524426.1 PFAM: Peptidase M75, Imelysin; KEGG: peptidase M75, Imelysin YP_008524427.1 PFAM: iron permease FTR1; KEGG: iron permease YP_008524428.1 KEGG: yjjN, putative oxidoreductase, Zn-dependent and NAD(P)-binding protein; PFAM: Alcohol dehydrogenase GroES domain protein, Alcohol dehydrogenase zinc-binding domain protein YP_008524429.1 KEGG: yjjM, GntR family transcriptional regulator; PFAM: GntR domain protein, regulatory protein GntR HTH; SMART: GntR domain protein YP_008524430.1 PFAM: major facilitator superfamily MFS_1; KEGG: major facilitator superfamily protein YP_008524431.1 HAMAP : Oligoribonuclease; PFAM: Exonuclease RNase T and DNA polymerase III; KEGG: exonuclease RNase T and DNA polymerase III; SMART: Exonuclease YP_008524432.1 TIGRFAM: ribosome small subunit-dependent GTPase A; HAMAP : ribosome biogenesis GTPase RsgA; KEGG: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC YP_008524433.1 TIGRFAM: phosphatidylserine decarboxylase; HAMAP : Phosphatidylserine decarboxylase proenzyme; KEGG: phosphatidylserine decarboxylase; PFAM: phosphatidylserine decarboxylase-related protein YP_008524434.1 PFAM: Mechanosensitive ion channel inner membrane domain 1, MscS Mechanosensitive ion channel; KEGG: hypothetical protein YP_008524435.1 PFAM: tRNA synthetase class II (D K and N); TIGRFAM: lysyl-tRNA synthetase-related protein GenX; HAMAP : Uncharacterized protein YjeA; KEGG: poxA, lysyl-tRNA synthetase YP_008524436.1 TIGRFAM: fumarate reductase, flavoprotein subunit, succinate dehydrogenase or fumarate reductase, flavoprotein subunit; KEGG: fumarate reductase flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein, Fumarate reductase/succinate dehydrogenase flavoprotein-like protein YP_008524437.1 TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; KEGG: fumarate reductase iron-sulfur subunit; PFAM: Succinate dehydogenase/fumarate reductase N-terminal, 4Fe-4S ferredoxin, iron-sulpur binding domain-containing protein YP_008524438.1 KEGG: fumarate reductase subunit C; HAMAP : Fumarate reductase subunit C; PFAM: fumarate reductase subunit C YP_008524439.1 KEGG: fumarate reductase subunit D; HAMAP : Fumarate reductase subunit D; PFAM: fumarate reductase D subunit YP_008524440.1 PFAM: protein of unknown function DUF486; KEGG: hypothetical protein YP_008524441.1 PFAM: GCN5-related N-acetyltransferase; KEGG: yjgM, acetyltransferase YP_008524442.1 KEGG: hypothetical protein; HAMAP : Uncharacterized conserved protein UCP018193; PFAM: protein of unknown function DUF1260 YP_008524443.1 PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region, aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain-containing protein; TIGRFAM: ornithine carbamoyltransferase; HAMAP : Ornithine carbamoyltransferase; KEGG: ornithine carbamoyltransferase subunit I YP_008524444.1 KEGG: glycoside hydrolase family 1; PFAM: glycoside hydrolase family 1 YP_008524445.1 KEGG: PTS system transporter subunit IIC; PFAM: phosphotransferase system EIIC, Phosphotransferase system EIIB/cysteine, phosphorylation site YP_008524446.1 KEGG: hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00022; PFAM: Conserved hypothetical protein CHP00022 YP_008524447.1 KEGG: hypothetical protein YP_008524448.1 PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain-containing protein, aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; TIGRFAM: aspartate carbamoyltransferase; HAMAP : Aspartate carbamoyltransferase; KEGG: pyrB, aspartate carbamoyltransferase catalytic subunit YP_008524449.1 TIGRFAM: aspartate carbamoyltransferase, regulatory subunit; HAMAP : Aspartate carbamoyltransferase regulatory chain; KEGG: aspartate carbamoyltransferase regulatory subunit; PFAM: Aspartate carbamoyltransferase regulatory subunit YP_008524450.1 KEGG: endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP YP_008524451.1 PFAM: protein of unknown function DUF407; KEGG: hypothetical protein YP_008524452.1 PFAM: protein of unknown function DUF403; KEGG: hypothetical protein YP_008524453.1 KEGG: hypothetical protein; PFAM: transglutaminase domain-containing protein, transglutaminase domain protein; SMART: transglutaminase domain-containing protein YP_008524454.1 PFAM: 20S proteasome A and B subunits; KEGG: 20S proteasome A and subunit Bs YP_008524455.1 KEGG: ABC transporter; PFAM: ABC transporter related protein, Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_008524456.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transport systems inner membrane component YP_008524457.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transport systems inner membrane component YP_008524458.1 PFAM: ABC-type transporter, periplasmic subunit; KEGG: ABC transporter substrate-binding protein YP_008524459.1 PFAM: homocysteine S-methyltransferase; KEGG: homocysteine S-methyltransferase YP_008524460.1 TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; KEGG: anaerobic ribonucleoside triphosphate reductase; PFAM: ATP-cone domain protein YP_008524461.1 TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; KEGG: anaerobic ribonucleoside-triphosphate reductase activating protein YP_008524462.1 KEGG: hypothetical protein YP_008524463.1 HAMAP : UPF0306 protein yhbP; KEGG: yhbP, hypothetical protein YP_008524464.1 KEGG: BNR repeat-containing glycosyl hydrolase YP_008524465.1 PFAM: Domain of unknown function DUF4347; KEGG: putative surface layer protein YP_008524467.1 PFAM: Tail Collar domain protein; KEGG: hypothetical protein YP_008524468.1 SMART: Polyketide synthase/Fatty acid synthase, KR; TIGRFAM: acetoin reductase; KEGG: 2,3-butanediol dehydrogenase/acetoin (diacetyl) reductase; PFAM: short-chain dehydrogenase/reductase SDR YP_008524469.1 KEGG: AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC domain-containing protein, AraC protein arabinose-binding/dimerization; SMART: Helix-turn-helix, AraC domain-containing protein YP_008524470.1 KEGG: hypothetical protein; PFAM: B3/4 domain protein; SMART: B3/4 domain protein YP_008524472.1 PFAM: Protein of unknown function DUF4336; KEGG: hypothetical protein YP_008524473.1 PFAM: Phophatidylserine decarboxylase, phosphatidylserine decarboxylase-related protein; KEGG: phosphatidylserine decarboxylase YP_008524474.1 PFAM: peptidase U34 dipeptidase; KEGG: dipeptidase-related protein YP_008524475.1 PFAM: Radical SAM domain protein; KEGG: radical SAM domain-containing protein YP_008524477.1 TIGRFAM: histidine utilization repressor; PFAM: UbiC transcription regulator-associated domain-containing protein, regulatory protein GntR HTH; KEGG: GntR family transcriptional regulator; SMART: UbiC transcription regulator-associated domain-containing protein, regulatory protein GntR HTH YP_008524478.1 PFAM: phenylalanine/histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase; HAMAP : Histidine ammonia-lyase; KEGG: histidine ammonia-lyase YP_008524479.1 PFAM: Urocanase domain; TIGRFAM: urocanate hydratase; HAMAP : Urocanate hydratase; KEGG: hutU, urocanate hydratase YP_008524480.1 PFAM: aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase; HAMAP : Histidinol-phosphate aminotransferase; KEGG: histidinol-phosphate aminotransferase YP_008524481.1 KEGG: (S)-mandelate dehydrogenase; PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase YP_008524482.1 KEGG: short-chain dehydrogenase/reductase SDR YP_008524484.1 KEGG: hypothetical protein YP_008524485.1 PFAM: Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase; HAMAP : Histidinol dehydrogenase; KEGG: histidinol dehydrogenase YP_008524486.1 PFAM: ABC transporter related protein; KEGG: ABC transporter-like protein; SMART: AAA ATPase YP_008524487.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transport systems inner membrane component YP_008524488.1 KEGG: NMT1/THI5 like domain-containing protein YP_008524490.1 KEGG: GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated domain-containing protein, regulatory protein GntR HTH; SMART: UbiC transcription regulator-associated domain-containing protein, regulatory protein GntR HTH YP_008524491.1 PFAM: peptidase M20, peptidase dimerization domain protein; KEGG: peptidase dimerization domain-containing protein YP_008524492.1 PFAM: ABC-type transporter, periplasmic subunit; KEGG: family 5 extracellular solute-binding protein YP_008524493.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transporter inner membrane component YP_008524494.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: ABC transporter permease YP_008524495.1 PFAM: ABC transporter related protein, Oligopeptide/dipeptide ABC transporter domain protein; KEGG: ABC transporter; SMART: AAA ATPase YP_008524496.1 PFAM: peptidase M20, peptidase dimerization domain protein; KEGG: acetylornithine deacetylase YP_008524497.1 PFAM: peptidase M24, creatinase; KEGG: peptidase M24 YP_008524498.1 PFAM: natural resistance-associated macrophage protein; KEGG: hypothetical protein YP_008524499.1 TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; KEGG: sugar (glycoside-Pentoside-Hexuronide) transporter YP_008524500.1 KEGG: glycoside hydrolase; PFAM: glycoside hydrolase family 3 domain protein, Fibronectin type III-like domain YP_008524501.1 KEGG: DeoR family transcriptional regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_008524502.1 KEGG: histidinol-phosphate phosphatase YP_008524503.1 PFAM: Glyoxalase-like domain; KEGG: bleomycin resistance protein YP_008524504.1 PFAM: protein of unknown function DUF1203; KEGG: hypothetical protein YP_008524505.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: drug/metabolite transporter permease YP_008524506.1 PFAM: Periplasmic binding protein domain; KEGG: solute-binding protein YP_008524507.1 PFAM: ABC-type transporter, integral membrane subunit, ABC transporter related protein; KEGG: inner-membrane translocator; SMART: AAA ATPase YP_008524508.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: HTH-type transcriptional regulator, LysR family YP_008524509.1 KEGG: putative 6-phospho-beta-glucosidase; PFAM: glycoside hydrolase family 4, Glycosyl hydrolase, family 4, C-terminal YP_008524510.1 PFAM: phosphotransferase system EIIC; KEGG: PTS system, cellobiose-specific IIC component YP_008524511.1 TIGRFAM: arsenate reductase; KEGG: arsenate reductase; PFAM: arsenate reductase like protein YP_008524512.1 KEGG: arsenical pump membrane protein; TIGRFAM: arsenical pump membrane protein; PFAM: Arsenical pump membrane protein YP_008524513.1 TIGRFAM: arsenite-activated ATPase ArsA; KEGG: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase-like domain YP_008524514.1 PFAM: Arsenical resistance operon trans-acting repressor ArsD; KEGG: arsD, arsenical resistance operon trans-acting repressor ArsD YP_008524515.1 KEGG: DNA-binding transcriptional repressor ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_008524516.1 KEGG: hypothetical protein YP_008524517.1 KEGG: hypothetical protein YP_008524518.1 KEGG: reverse transcriptase; PFAM: RNA-directed DNA polymerase (Reverse transcriptase) YP_008524519.1 PFAM: transposase IS3/IS911 family protein; KEGG: putative tansposase YP_008524520.1 PFAM: transposase IS116/IS110/IS902 family protein, transposase IS111A/IS1328/IS1533; KEGG: putative transposase YP_008524521.1 PFAM: Domain of unknown function DUF4102; KEGG: Integrase YP_008524522.1 PFAM: tail assembly chaperone gp38; KEGG: tail assembly chaperone gp38 YP_008524523.1 PFAM: Tail Collar domain protein; KEGG: tail fiber protein YP_008524524.1 PFAM: Protein of unknown function DUF2612; KEGG: hypothetical protein YP_008524525.1 KEGG: hypothetical protein YP_008524526.1 KEGG: putative bacteriophage protein YP_008524527.1 TIGRFAM: phage baseplate assembly protein V; KEGG: bacteriophage protein YP_008524528.1 PFAM: Protein of unknown function DUF2335, membrane; KEGG: putative inner membrane protein YP_008524531.1 KEGG: putative bacteriophage protein YP_008524532.1 KEGG: bacteriophage protein YP_008524533.1 KEGG: hypothetical protein YP_008524534.1 KEGG: hypothetical protein YP_008524535.1 KEGG: hypothetical protein YP_008524536.1 PFAM: Protein of unknown function DUF3277; KEGG: bacteriophage protein YP_008524537.1 PFAM: Protein of unknown function DUF3383; KEGG: hypothetical protein YP_008524538.1 KEGG: bacteriophage protein YP_008524539.1 KEGG: hypothetical protein YP_008524540.1 KEGG: bacteriophage protein YP_008524541.1 PFAM: Protein of unknown function DUF4054; KEGG: bacteriophage protein YP_008524542.1 KEGG: hypothetical protein YP_008524543.1 PFAM: Protein of unknown function DUF2184; KEGG: putative bacteriophage protein YP_008524544.1 KEGG: Putative bacteriophage protein YP_008524545.1 PFAM: Uncharacterized conserved protein UCP029215; KEGG: hypothetical protein YP_008524546.1 PFAM: head morphogenesis protein SPP1 gp7; KEGG: bacteriophage protein YP_008524547.1 KEGG: hypothetical protein; TIGRFAM: phage-associated protein, HI1409 family; PFAM: Protein of unknown function DUF1073 YP_008524548.1 KEGG: putative bacteriophage protein; TIGRFAM: phage terminase, large subunit, PBSX family; PFAM: terminase large subunit YP_008524549.1 KEGG: bacteriophage protein YP_008524550.1 KEGG: hypothetical protein YP_008524551.1 KEGG: Ig domain-containing protein group 1 domain-containing protein YP_008524552.1 KEGG: hypothetical protein YP_008524553.1 PFAM: glycoside hydrolase family 24; KEGG: putative phage lysozyme YP_008524554.1 PFAM: Lysis S family protein; KEGG: hypothetical protein YP_008524555.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: phage DNA methylase YP_008524556.1 PFAM: antitermination Q family protein; KEGG: gifsy-1 prophage RegQ YP_008524557.1 KEGG: ylcG, expressed protein, DLP12 prophage YP_008524558.1 PFAM: Lambda NinG family protein; KEGG: bacteriophage lambda NinG family protein YP_008524559.1 PFAM: NinB family protein; KEGG: NinB protein YP_008524560.1 KEGG: hypothetical protein YP_008524561.1 PFAM: C-5 cytosine-specific DNA methylase; KEGG: C-5 cytosine-specific DNA methylase YP_008524562.1 KEGG: Methyltransferase YP_008524563.1 KEGG: hypothetical protein YP_008524565.1 PFAM: IstB domain protein ATP-binding protein; KEGG: DNA replication protein DnaC YP_008524566.1 KEGG: hypothetical protein YP_008524567.1 KEGG: hypothetical protein YP_008524568.1 PFAM: protein of unknown function DUF1019; KEGG: regulatory protein CII YP_008524569.1 KEGG: helix-turn-helix domain-containing protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_008524570.1 SMART: helix-turn-helix domain protein; KEGG: helix-turn-helix domain-containing protein YP_008524571.1 PFAM: protein of unknown function DUF1482; KEGG: hypothetical protein YP_008524572.1 PFAM: exodeoxyribonuclease VIII; KEGG: exodeoxyribonuclease 8 YP_008524574.1 KEGG: exodeoxyribonuclease X; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease YP_008524575.1 KEGG: hypothetical protein YP_008524576.1 KEGG: hypothetical protein YP_008524577.1 KEGG: phage/conjugal plasmid C-4 type zinc finger protein, TraR family YP_008524578.1 PFAM: integrase family protein; KEGG: phage integrase YP_008524579.1 PFAM: Aldehyde Dehydrogenase; TIGRFAM: gamma-glutamyl phosphate reductase; HAMAP : Gamma-glutamyl phosphate reductase; KEGG: gamma-glutamyl phosphate reductase YP_008524580.1 SMART: PUA domain containing protein; TIGRFAM: glutamate 5-kinase; KEGG: glutamate 5-kinase; HAMAP : Glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase, PUA domain containing protein YP_008524581.1 PFAM: transcriptional regulator Crl; KEGG: transcriptional regulator Crl YP_008524582.1 HAMAP : Esterase frsA; KEGG: frsA, fermentation/respiration switch protein YP_008524583.1 HAMAP : Xanthine phosphoribosyltransferase; KEGG: xanthine-guanine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_008524584.1 TIGRFAM: aminoacyl-histidine dipeptidase; KEGG: aminoacyl-histidine dipeptidase; PFAM: peptidase M20 YP_008524585.1 HAMAP : DNA polymerase IV; KEGG: dinB, DNA polymerase IV; PFAM: UMUC domain protein DNA-repair protein, DNA polymerase, Y-family, little finger domain-containing protein, DNA polymerase type-Y, HhH motif YP_008524586.1 PFAM: ApbE family lipoprotein; KEGG: apbE1, thiamine biosynthesis lipoprotein ApbE YP_008524587.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: ErfK/YbiS/YcfS/YnhG family protein YP_008524588.1 PFAM: Putative glutamine amidotransferase type 2; KEGG: glutamine amidotransferase class-II YP_008524589.1 TIGRFAM: phosphoheptose isomerase; HAMAP : Phosphoheptose isomerase; KEGG: phosphoheptose isomerase; PFAM: sugar isomerase (SIS) YP_008524590.1 PFAM: protein of unknown function DUF1974, acyl-CoA dehydrogenase domain-containing protein; KEGG: fadE, acyl-CoA dehydrogenase YP_008524591.1 KEGG: HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease YP_008524592.1 KEGG: putative aminotransferase; PFAM: aminotransferase class I and II YP_008524593.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: hypothetical protein YP_008524594.1 TIGRFAM: amidase, hydantoinase/carbamoylase family; KEGG: amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20, peptidase dimerization domain protein YP_008524595.1 KEGG: aminotransferase class V; PFAM: aminotransferase class V YP_008524596.1 PFAM: ABC transporter related protein; KEGG: ABC transporter; SMART: AAA ATPase YP_008524597.1 KEGG: amino acid ABC transporter permease; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: ABC-type transporter, integral membrane subunit YP_008524598.1 KEGG: polar amino acid ABC transporter permease; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: ABC-type transporter, integral membrane subunit YP_008524599.1 KEGG: amino acid ABC transporter substrate-binding protein; PFAM: ABC-type transporter, periplasmic subunit family 3; SMART: ABC-type transporter, periplasmic subunit family 3 YP_008524600.1 PFAM: helix-turn-helix protein RpiR, sugar isomerase (SIS); KEGG: RpiR family transcriptional regulator YP_008524601.1 KEGG: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase YP_008524602.1 PFAM: Protein of unknown function DUF4089; KEGG: hypothetical protein YP_008524603.1 KEGG: amidase; TIGRFAM: amidohydrolase, AtzE family; PFAM: Amidase YP_008524604.1 PFAM: Protein of unknown function DUF3225; KEGG: hypothetical protein YP_008524605.1 PFAM: helix-turn-helix domain protein; KEGG: XRE family transcriptional regulator YP_008524606.1 PFAM: HipA domain protein; KEGG: HipA domain-containing protein YP_008524607.1 TIGRFAM: urate catabolism protein; KEGG: urate catabolism protein; PFAM: polysaccharide deacetylase YP_008524608.1 KEGG: Asp/Glu racemase; PFAM: Asp/Glu/hydantoin racemase YP_008524609.1 KEGG: GntR family transcriptional regulator; PFAM: GntR domain protein, regulatory protein GntR HTH; SMART: regulatory protein GntR HTH, GntR domain protein YP_008524610.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: permease for cytosine/purines uracil thiamine allantoin YP_008524611.1 SMART: helix-turn-helix domain protein; KEGG: transcriptional regulator YP_008524612.1 PFAM: Methyltransferase type 11; KEGG: type 11 methyltransferase YP_008524613.1 TIGRFAM: allophanate hydrolase; KEGG: allophanate hydrolase; PFAM: Amidase YP_008524614.1 KEGG: GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH, GntR domain protein; SMART: regulatory protein GntR HTH, GntR domain protein YP_008524615.1 SMART: AAA ATPase; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; KEGG: proV, glycine betaine/L-proline transport ATP-binding protein; PFAM: ABC transporter related protein YP_008524616.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: proW, glycine betaine transporter membrane protein YP_008524617.1 PFAM: ABC-type glycine betaine transport, periplasmic subunit; KEGG: glycine betaine ABC transporter substrate-binding protein YP_008524618.1 PFAM: major facilitator superfamily MFS_1; KEGG: transport protein YP_008524619.1 PFAM: AzlC family protein; KEGG: ygaZ, amino acid transporter YP_008524620.1 PFAM: branched-chain amino acid transport; KEGG: ygaH, hypothetical protein YP_008524621.1 KEGG: transcriptional repressor MprA; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_008524622.1 KEGG: efflux pump membrane protein; TIGRFAM: efflux pump membrane protein; PFAM: secretion protein HlyD family protein YP_008524623.1 KEGG: EmrB/QacA subfamily drug resistance transporter; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_008524624.1 KEGG: methyltransferase; PFAM: tRNA/rRNA methyltransferase (SpoU), RNA 2-O ribose methyltransferase substrate binding protein; SMART: RNA 2-O ribose methyltransferase substrate binding protein YP_008524626.1 TIGRFAM: thioredoxin; KEGG: thioredoxin 2; PFAM: Thioredoxin domain-containing protein YP_008524627.1 PFAM: DTW domain containing protein; KEGG: DTW domain-containing protein YP_008524628.1 KEGG: GCN5-like N-acetyltransferase; PFAM: CoA-binding domain protein, GCN5-related N-acetyltransferase; SMART: CoA-binding domain protein YP_008524629.1 PFAM: Phospholipase D-like domain; KEGG: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase YP_008524630.1 TIGRFAM: D,D-heptose 1,7-bisphosphate phosphatase, histidinol-phosphate phosphatase family protein, hydrolase, HAD-superfamily, subfamily IIIA; KEGG: D,D-heptose 1,7-bisphosphate phosphatase YP_008524631.1 SMART: NIL domain-containing protein, AAA ATPase; TIGRFAM: D-methionine ABC transporter, ATPase subunit; KEGG: D-methionine ABC transporter ATPase subunit; PFAM: ABC transporter related protein, NIL domain-containing protein YP_008524632.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: DL-methionine transporter permease subunit YP_008524633.1 KEGG: lipoprotein, YaeC family; TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein YP_008524634.1 KEGG: rcsF, outer membrane protein, signal YP_008524635.1 KEGG: hypothetical protein; TIGRFAM: Uncharacterized protein family UPF0066; PFAM: Uncharacterized protein family UPF0066 YP_008524636.1 TIGRFAM: prolyl-tRNA synthetase; HAMAP : Prolyl-tRNA synthetase; KEGG: prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S), Anticodon-binding domain protein, YbaK/prolyl-tRNA synthetase associated region YP_008524637.1 KEGG: RpoD subfamily RNA polymerase sigma-70 subunit; TIGRFAM: RNA polymerase sigma factor RpoS, RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein, sigma-70 region 3 domain protein, sigma-70 region 1.2, sigma-70 region 4 domain protein YP_008524638.1 KEGG: lipoprotein NlpD; PFAM: Peptidase M23, Peptidoglycan-binding lysin domain-containing protein; SMART: Peptidoglycan-binding LysM YP_008524639.1 PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; TIGRFAM: protein-L-isoaspartate O-methyltransferase; HAMAP : Protein-L-isoaspartate O-methyltransferase; KEGG: protein-L-isoaspartate O-methyltransferase YP_008524640.1 TIGRFAM: tRNA pseudouridine synthase D TruD; HAMAP : tRNA pseudouridine synthase D; KEGG: truD, tRNA pseudouridine synthase D; PFAM: tRNA pseudouridine synthase D TruD YP_008524641.1 TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; HAMAP : 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; KEGG: ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase YP_008524642.1 PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; HAMAP : 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; KEGG: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_008524643.1 KEGG: ftsB, cell division protein FtsB; HAMAP : Cell division protein ftsB-like protein; PFAM: Septum formation initiator YP_008524644.1 PFAM: Protein of unknown function DUF3561; KEGG: hypothetical protein YP_008524645.1 PFAM: adenylylsulfate kinase; TIGRFAM: adenylylsulfate kinase; HAMAP : Adenylyl-sulfate kinase; KEGG: cysC, adenosine 5'-phosphosulfate kinase YP_008524646.1 PFAM: protein synthesis factor GTP-binding protein, elongation factor Tu domain 2 protein; TIGRFAM: sulfate adenylyltransferase, large subunit, small GTP-binding protein; HAMAP : Sulfate adenylyltransferase subunit 1; KEGG: sulfate adenylyltransferase YP_008524647.1 PFAM: phosphoadenosine phosphosulfate reductase; TIGRFAM: sulfate adenylyltransferase, small subunit; HAMAP : Sulfate adenylyltransferase subunit 2; KEGG: sulfate adenylyltransferase subunit 2 YP_008524648.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase, Siroheme synthase, dimerization domain-containing protein, Siroheme synthase domain-containing protein; TIGRFAM: uroporphyrin-III C-methyltransferase, siroheme synthase; HAMAP : Siroheme synthase; KEGG: uroporphyrin-III C-methyltransferase YP_008524650.1 PFAM: phosphoadenosine phosphosulfate reductase; TIGRFAM: phosphoadenosine phosphosulfate reductase; HAMAP : Phosphoadenosine phosphosulfate reductase; KEGG: phosphoadenosine phosphosulfate reductase YP_008524651.1 PFAM: nitrite and sulfite reductase 4Fe-4S region, nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; TIGRFAM: sulfite reductase (NADPH) hemoprotein, beta-component; HAMAP : Sulfite reductase [NADPH] hemoprotein beta-component; KEGG: sulfite reductase subunit beta YP_008524652.1 PFAM: FAD-binding domain protein, oxidoreductase FAD/NAD(P)-binding domain protein, flavodoxin/nitric oxide synthase; TIGRFAM: sulfite reductase [NADPH] flavoprotein, alpha chain; HAMAP : Sulfite reductase [NADPH] flavoprotein alpha-component; KEGG: cysJ, sulfite reductase subunit alpha, flavoprotein YP_008524653.1 KEGG: 6-pyruvoyl tetrahydropterin synthase; TIGRFAM: queuosine biosynthesis protein QueD; PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein YP_008524654.1 KEGG: ygcF, hypothetical protein; HAMAP : 7-carboxy-7-deazaguanine synthase-like; PFAM: Radical SAM domain protein YP_008524655.1 PFAM: glycosyl hydrolase family 88; KEGG: glycosyl hydrolase family 88 YP_008524656.1 KEGG: integral membrane transport protein; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit YP_008524657.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: membrane transport protein YP_008524658.1 KEGG: dicarboxylate-binding periplasmic protein; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7 YP_008524659.1 PFAM: Enolase domain-containing protein; TIGRFAM: enolase; HAMAP : Enolase; KEGG: eno, enolase YP_008524660.1 PFAM: CTP synthase, Glutamine amidotransferase type 1; TIGRFAM: CTP synthase; HAMAP : CTP synthase; KEGG: pyrG, CTP synthetase YP_008524661.1 KEGG: mazG, nucleoside triphosphate pyrophosphohydrolase; TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase YP_008524662.1 SMART: RelA/SpoT domain protein; TIGRFAM: RelA/SpoT family protein; KEGG: (p)ppGpp synthetase I SpoT/RelA; PFAM: RelA/SpoT domain protein, TGS domain-containing protein YP_008524663.1 TIGRFAM: RNA methyltransferase, TrmA family; HAMAP : 23S rRNA (uracil-5-)-methyltransferase rumA; KEGG: rumA, 23S rRNA (Uracil-5-) -methyltransferase rumA; PFAM: (Uracil-5)-methyltransferase, deoxyribonuclease/rho motif-related TRAM YP_008524664.1 KEGG: barA, hybrid sensory histidine kinase, in two-component regulatory system with UvrY; PFAM: Protein of unknown function DUF2222, ATP-binding region ATPase domain protein, histidine kinase A domain protein, Hpt domain protein, histidine kinase HAMP region domain protein, response regulator receiver; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein, histidine kinase HAMP region domain protein, response regulator receiver, Hpt domain protein YP_008524665.1 TIGRFAM: glycerate kinase; KEGG: glycerate kinase; PFAM: glycerate kinase YP_008524666.1 TIGRFAM: 2-hydroxy-3-oxopropionate reductase; KEGG: 2-hydroxy-3-oxopropionate reductase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding protein YP_008524667.1 TIGRFAM: 2-dehydro-3-deoxyglucarate aldolase; KEGG: garL, alpha-dehydro-beta-deoxy-D-glucarate aldolase; PFAM: HpcH/HpaI aldolase YP_008524668.1 SMART: Mandelate racemase/muconate lactonizing protein; TIGRFAM: glucarate dehydratase; KEGG: glucarate dehydratase; PFAM: Mandelate racemase/muconate lactonizing protein YP_008524669.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: glucarate dehydratase; SMART: Mandelate racemase/muconate lactonizing protein YP_008524670.1 KEGG: gudP, glucarate transporter; TIGRFAM: d-galactonate transporter; PFAM: major facilitator superfamily MFS_1 YP_008524671.1 SMART: SAF domain protein; TIGRFAM: galactarate dehydratase; KEGG: galactarate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein, SAF domain protein YP_008524672.1 KEGG: methyl-accepting chemotaxis sensory transducer YP_008524673.1 PFAM: FlxA-like protein; KEGG: hypothetical protein YP_008524674.1 PFAM: FlxA-like protein; KEGG: hypothetical protein YP_008524675.1 PFAM: Protein of unknown function DUF3820; KEGG: hypothetical protein YP_008524676.1 SMART: NAD-dependent DNA ligase , BRCT domain protein, Helix-hairpin-helix DNA-binding class 1; TIGRFAM: DNA ligase, NAD-dependent; KEGG: ligA, DNA ligase, NAD(+)-dependent; HAMAP : DNA ligase; PFAM: NAD-dependent DNA ligase adenylation, NAD-dependent DNA ligase OB-fold-containing protein, BRCT domain protein YP_008524677.1 TIGRFAM: rfaE bifunctional protein, cytidyltransferase-related domain protein; HAMAP : Bifunctional protein hldE; KEGG: bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; PFAM: PfkB domain protein, cytidylyltransferase YP_008524678.1 HAMAP : Glutamate-ammonia-ligase adenylyltransferase; KEGG: (glutamate--ammonia-ligase) adenylyltransferase; PFAM: glutamate-ammonia ligase adenylyltransferase, GlnD PII-uridylyltransferase YP_008524679.1 PFAM: adenylate cyclase; KEGG: adenylate cyclase YP_008524680.1 KEGG: SH3 domain-containing protein; TIGRFAM: Uncharacterized conserved protein UCP006158, SH3, YgiM; SMART: SH3 domain protein YP_008524681.1 HAMAP : CCA-adding enzyme, Multifunctional CCA protein; KEGG: polynucleotide adenylyltransferase/metal dependent phosphohydrolase; PFAM: Polynucleotide adenylyltransferase region, metal-dependent phosphohydrolase HD sub domain-containing protein YP_008524682.1 TIGRFAM: undecaprenol kinase; HAMAP : Undecaprenyl-diphosphatase; KEGG: UDP pyrophosphate phosphatase; PFAM: Bacitracin resistance protein BacA YP_008524683.1 SMART: dihydroneopterin aldolase; TIGRFAM: dihydroneopterin aldolase; KEGG: folB, bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase; PFAM: dihydroneopterin aldolase YP_008524684.1 TIGRFAM: protein of unknown function DUF205; HAMAP : Glycerol-3-phosphate acyltransferase; KEGG: glycerol-3-phosphate acyltransferase PlsY; PFAM: protein of unknown function DUF205 YP_008524685.1 HAMAP : Inorganic pyrophosphatase; KEGG: ppa, inorganic pyrophosphatase; PFAM: Inorganic pyrophosphatase YP_008524686.1 PFAM: AIG2 family protein; KEGG: AIG2 family protein YP_008524687.1 PFAM: protein of unknown function DUF490; KEGG: hypothetical protein YP_008524688.1 PFAM: surface antigen (D15), surface antigen variable number repeat-containing protein; KEGG: outer membrane protein YP_008524689.1 PFAM: Methionine sulfoxide reductase A; TIGRFAM: peptide methionine sulfoxide reductase; HAMAP : Peptide methionine sulfoxide reductase msrA; KEGG: msrA, methionine sulfoxide reductase A YP_008524690.1 KEGG: hypothetical protein; PFAM: protein of unknown function DUF21, transporter-associated region, CBS domain containing protein; SMART: transporter-associated region, CBS domain containing protein YP_008524691.1 PFAM: protein of unknown function DUF1107; KEGG: hypothetical protein YP_008524692.1 KEGG: hypothetical protein; TIGRFAM: Conserved hypothetical protein, YtfJ; PFAM: Conserved hypothetical protein, YtfJ YP_008524693.1 KEGG: adenosine-3'(2'),5'-bisphosphate nucleotidase; TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase; PFAM: inositol monophosphatase YP_008524694.1 PFAM: Protein of unknown function DUF2502; KEGG: hypothetical protein YP_008524695.1 TIGRFAM: urea ABC transporter, substrate-binding protein; KEGG: extracellular ligand-binding receptor YP_008524696.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: urea ABC transporter permease UrtB YP_008524697.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: urea ABC transporter permease UrtC YP_008524698.1 PFAM: ABC transporter related protein; KEGG: ABC transporter; SMART: AAA ATPase YP_008524699.1 PFAM: ABC transporter related protein; KEGG: ABC transporter; SMART: AAA ATPase YP_008524700.1 PFAM: Acetamidase/Formamidase; KEGG: putative acetamidase/formamidase YP_008524701.1 KEGG: branched-chain amino acid ABC transporter substrate-binding protein YP_008524702.1 KEGG: ANTAR domain-containing protein; PFAM: ANTAR domain protein; SMART: ANTAR domain protein YP_008524703.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_008524704.1 PFAM: peptidylprolyl isomerase FKBP-type, FKBP-type peptidyl-prolyl isomerase domain protein; KEGG: peptidyl-prolyl cis-trans isomerase YP_008524705.1 PFAM: Opacity-associated protein A, Opacity-associated protein A domain protein; KEGG: Opacity-associated protein A YP_008524706.1 TIGRFAM: ribosomal protein L9; HAMAP : 50S ribosomal protein L9; KEGG: rplI, 50S ribosomal protein L9; PFAM: Ribosomal protein L9 YP_008524707.1 TIGRFAM: ribosomal protein S18; HAMAP : 30S ribosomal protein S18; KEGG: rpsR, 30S ribosomal protein S18; PFAM: ribosomal protein S18 YP_008524708.1 KEGG: single-strand binding protein/Primosomal replication protein n; HAMAP : Primosomal replication protein n; PFAM: single-strand binding protein/Primosomal replication protein n YP_008524709.1 TIGRFAM: ribosomal protein S6; HAMAP : 30S ribosomal protein S6; KEGG: rpsF, 30S ribosomal protein S6; PFAM: ribosomal protein S6 YP_008524710.1 KEGG: methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer, histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer, histidine kinase HAMP region domain protein YP_008524711.1 PFAM: protein of unknown function DUF1471; KEGG: putative biofilm stress and motility protein A YP_008524712.1 KEGG: hypothetical protein YP_008524713.1 SMART: RNA 2-O ribose methyltransferase substrate binding protein; TIGRFAM: RNA methyltransferase, TrmH family, group 3; KEGG: rlmB, 23S rRNA Gm2251-methyltransferase; HAMAP : 23S rRNA (guanosine-2-O-)-methyltransferase RlmB; PFAM: tRNA/rRNA methyltransferase (SpoU), RNA 2-O ribose methyltransferase substrate binding protein YP_008524714.1 KEGG: ribonuclease R; PFAM: ribonuclease II, Ribonuclease B OB region domain-containing protein, RNA binding S1 domain protein, Ribonuclease R winged-helix domain protein; TIGRFAM: ribonuclease R, VacB and RNase II family 3'-5' exoribonuclease; HAMAP : ribonuclease R; SMART: ribonuclease II, RNA-binding domain, S1, Cold shock protein YP_008524715.1 KEGG: nsrR, DNA-binding transcriptional regulator; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074 YP_008524716.1 KEGG: methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer, ligand binding Tar domain protein, histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer, histidine kinase HAMP region domain protein YP_008524717.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: codB, cytosine permease YP_008524718.1 PFAM: purine catabolism PurC domain protein, PucR C-terminal helix-turn-helix domain; KEGG: PucR family transcriptional regulator YP_008524719.1 KEGG: codA, cytosine deaminase; PFAM: Amidohydrolase 3 YP_008524720.1 TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: yggR, transporter; SMART: AAA ATPase YP_008524721.1 KEGG: alanine racemase; TIGRFAM: protein of unknown function UPF0001; PFAM: alanine racemase domain protein YP_008524722.1 TIGRFAM: pyrroline-5-carboxylate reductase; KEGG: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent YP_008524723.1 PFAM: protein of unknown function YGGT; KEGG: hypothetical protein YP_008524724.1 TIGRFAM: Conserved hypothetical protein CHP00251; HAMAP : UPF0235 protein yggU; KEGG: yggU, hypothetical protein; PFAM: protein of unknown function DUF167 YP_008524725.1 PFAM: Ham1 family protein; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; HAMAP : Nucleoside-triphosphatase rdgB; KEGG: Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) YP_008524726.1 TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein, HemN domain protein; KEGG: coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB YP_008524727.1 PFAM: Entericidin EcnAB; KEGG: Entericidin EcnAB YP_008524728.1 PFAM: GCN5-related N-acetyltransferase; KEGG: N-acetyltransferase GCN5 YP_008524729.1 PFAM: major facilitator superfamily MFS_1; KEGG: lysophospholipid transporter LplT YP_008524730.1 SMART: phospholipid/glycerol acyltransferase; HAMAP : Bifunctional protein aas; KEGG: aas, bifunctional 2-acylglycerophospho-ethanolamine acyl transferase/acyl-acyl carrier protein synthetase; PFAM: AMP-dependent synthetase and ligase, phospholipid/glycerol acyltransferase YP_008524731.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase), Group II intron maturase-specific domain protein; KEGG: RNA-directed DNA polymerase YP_008524732.1 KEGG: LacI family transcriptional regulator; PFAM: regulatory protein LacI; SMART: regulatory protein LacI YP_008524733.1 KEGG: GntR family transcriptional regulator; PFAM: GntR domain protein, regulatory protein GntR HTH; SMART: regulatory protein GntR HTH, GntR domain protein YP_008524734.1 PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: phosphotransferase system lactose/cellobiose-specific IIB subunit YP_008524735.1 KEGG: celH, beta-glucosidase; PFAM: glycoside hydrolase family 1 YP_008524736.1 TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; KEGG: celB, PTS system cellobiose-specific transporter subunit IIC; PFAM: phosphotransferase system EIIC YP_008524737.1 KEGG: LacI family transcriptional regulator; PFAM: regulatory protein LacI; SMART: regulatory protein LacI YP_008524738.1 PFAM: Glutathione S-transferase domain-containing protein; KEGG: gst, glutathione S-transferase YP_008524739.1 PFAM: Glutathione S-transferase domain-containing protein; KEGG: yghU, putative glutathione S-transferase YghU YP_008524740.1 KEGG: two component transcriptional regulator YP_008524741.1 KEGG: TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, TonB-dependent receptor plug YP_008524742.1 PFAM: transposase IS200-family protein; KEGG: transposase YP_008524743.1 PFAM: ABC-type transporter, periplasmic subunit; KEGG: periplasmic binding protein YP_008524745.1 KEGG: Orn/DAP/Arg decarboxylase 2; PFAM: Orn/DAP/Arg decarboxylase 2, N-terminal, Orn/DAP/Arg decarboxylase 2, C-terminal YP_008524746.1 PFAM: IucA/IucC family protein, FhuF/siderophore biosynthesis protein, C-terminal; KEGG: IucA/IucC family protein YP_008524747.1 PFAM: major facilitator superfamily MFS_1; KEGG: major facilitator superfamily protein YP_008524748.1 PFAM: IucA/IucC family protein, FhuF/siderophore biosynthesis protein, C-terminal; KEGG: IucA/IucC family protein YP_008524749.1 KEGG: siderophore biosynthesis protein YP_008524750.1 PFAM: HpcH/HpaI aldolase; KEGG: HpcH/HpaI aldolase YP_008524751.1 PFAM: monooxygenase FAD-binding protein; KEGG: monooxygenase FAD-binding YP_008524752.1 KEGG: ferredoxin; PFAM: ferredoxin, Oxidoreductase FAD-binding domain protein, oxidoreductase FAD/NAD(P)-binding domain protein YP_008524753.1 PFAM: Rieske [2Fe-2S] iron-sulfur domain-containing protein; KEGG: Rieske (2Fe-2S) domain-containing protein YP_008524754.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: LysR family transcriptional regulator YP_008524755.1 KEGG: OHCU decarboxylase; TIGRFAM: OHCU decarboxylase; PFAM: Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase YP_008524756.1 KEGG: hydroxyisourate hydrolase; TIGRFAM: hydroxyisourate hydrolase; PFAM: Transthyretin/hydroxyisourate hydrolase, superfamily YP_008524757.1 TIGRFAM: alkyl hydroperoxide reductase, F subunit; KEGG: alkyl hydroperoxide reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain, FAD-dependent pyridine nucleotide-disulfide oxidoreductase, Thioredoxin-like fold-containing protein YP_008524758.1 TIGRFAM: peroxiredoxin; KEGG: ahpC, alkyl hydroperoxide reductase C22 protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen, Peroxiredoxin YP_008524759.1 PFAM: Non-hem dioxygenase N-terminal domain, 2OG-Fe(II) oxygenase; KEGG: 2OG-Fe(II) oxygenase YP_008524760.1 KEGG: chlorohydrolase/deaminase family protein; PFAM: amidohydrolase YP_008524761.1 KEGG: nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein YP_008524762.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: LysR family transcriptional regulator YP_008524763.1 KEGG: amidohydrolase YP_008524764.1 PFAM: Endoribonuclease L-PSP; KEGG: endoribonuclease L-PSP YP_008524765.1 PFAM: Creatininase; KEGG: creatininase YP_008524766.1 KEGG: nitrate/sulfonate/bicarbonate ABC transporter permease YP_008524767.1 PFAM: ABC transporter related protein; KEGG: ABC transporter; SMART: AAA ATPase YP_008524768.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: nitrate/sulfonate/bicarbonate ABC transporter permease YP_008524769.1 PFAM: FAD linked oxidase domain-containing protein; KEGG: FAD/FMN-dependent dehydrogenase YP_008524770.1 PFAM: Orn/DAP/Arg decarboxylase 2, N-terminal, Orn/DAP/Arg decarboxylase 2, C-terminal; TIGRFAM: diaminopimelate decarboxylase; HAMAP : diaminopimelate decarboxylase; KEGG: diaminopimelate decarboxylase YP_008524771.1 PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: LysR family transcriptional regulator YP_008524772.1 PFAM: ABC transporter related protein, Transport-associated OB domain-containing protein; KEGG: ABC transporter; SMART: AAA ATPase YP_008524773.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: ABC transporter permease YP_008524774.1 PFAM: ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transporter inner membrane component YP_008524775.1 PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: hypothetical protein YP_008524776.1 KEGG: family 1 extracellular solute-binding protein YP_008524777.1 KEGG: GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated domain-containing protein, regulatory protein GntR HTH; SMART: UbiC transcription regulator-associated domain-containing protein, regulatory protein GntR HTH YP_008524778.1 PFAM: Domain of unknown function DUF1814; KEGG: hypothetical protein YP_008524779.1 PFAM: Domain of unknown function DUF4095; KEGG: hypothetical protein YP_008524780.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: dehydrogenase YP_008524781.1 PFAM: regulatory protein TetR; KEGG: TetR family transcriptional regulator YP_008524782.1 PFAM: integrase family protein; KEGG: integrase family protein YP_008524783.1 KEGG: dusA, tRNA dihydrouridine synthase A; TIGRFAM: TIM-barrel protein, yjbN family; PFAM: dihydrouridine synthase DuS YP_008524784.1 KEGG: pspG, phage shock protein G; TIGRFAM: phage shock protein G; PFAM: shock protein G YP_008524785.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein, Alcohol dehydrogenase GroES domain protein; KEGG: quinone oxidoreductase; SMART: Polyketide synthase, enoylreductase YP_008524786.1 TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; KEGG: dnaB, replicative DNA helicase; SMART: AAA ATPase YP_008524787.1 KEGG: alr, alanine racemase; PFAM: alanine racemase domain protein; TIGRFAM: alanine racemase; HAMAP : Alanine racemase; SMART: alanine racemase domain protein YP_008524788.1 PFAM: protein of unknown function DUF1471; KEGG: hypothetical protein YP_008524789.1 PFAM: ABC-type transporter, periplasmic subunit family 3; KEGG: Prephenate dehydratase; SMART: ABC-type transporter, periplasmic subunit family 3 YP_008524790.1 KEGG: AsnC family transcriptional regulator; PFAM: Transcription regulator, AsnC-type; SMART: Transcription regulator, AsnC-type YP_008524791.1 PFAM: protein of unknown function DUF161; KEGG: hypothetical protein YP_008524792.1 KEGG: aromatic amino acid aminotransferase; PFAM: aminotransferase class I and II YP_008524793.1 KEGG: hypothetical protein YP_008524794.1 KEGG: hypothetical protein YP_008524795.1 KEGG: von Willebrand factor type A